23 d1jr1a1 Probab=100.00  E-value=0  Score=307.53  Aligned_columns=307  Identities=17%

Q ss_pred             CCCCCHHHHHHHHHHHHHCEECCCCCC-CCCCCCCEEEECCE-EECCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEE
Q ss_conf             487651889987877884034275589-98777346898887-6148836532100131351037999999997798389
Q batch____        27 GGAYSEYTLRRNVEDLSEVALRQRILK-NMSDLSLETTLFNE-KLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFT  104 (396)
Q Consensus        27 ~g~~~e~t~~~N~~af~~~~l~pr~L~-d~~~vdlst~ilG~-~~~~Pi~iapm~~~~~~~~~~e~~lAraA~~~G~~~~  104 (396)
                      |-+.|+++-.++.-.||++.|+|+.+. +.++|||+|+|+|+ ++++||++|||++..      +..+|+++++.|....
T Consensus         1 ~~~~~~~~~~~~~ltfddv~l~P~~~~~~~~~vd~st~~~g~~~l~~Pii~apM~g~s------~~~la~a~a~~gg~g~   74 (362)
T d1jr1a1           1 GLTAQQLFNCGDGLTYNDFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPMDTVT------EAGMAIAMALTGGIGF   74 (362)
T ss_dssp             CBCHHHHTSSCCCCCGGGEEECCCCCCSCGGGCBCCEESSSSCEESSCEEECCCTTTC------SHHHHHHHHHHTCEEE
T ss_pred             CCCHHHHHCCCCCCCHHHEEEECCCCCCCHHHCCCEEEECCCCCCCCCEEECCCCCCC------CHHHHHHHHHCCCCEE
T ss_conf             9876674035557874436872686788743383607851460024345863664678------9999999996786021


Q ss_pred             ECCCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf             73677688899862058870441003578788999999766549828986056553487846764101223222111111
Q batch____       105 LSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQ  184 (396)
Q Consensus       105 lgs~~~~~~eev~~~~~~~~~fqly~~~d~~~~~~li~~a~~~G~~al~~tvD~~~~g~r~~d~~~~~~~~~~~~~~~~~  184 (396)
                      ++  ...+.++..+.              ....+.+.+...........+.++..+....+...+               
T Consensus        75 i~--~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---------------  123 (362)
T d1jr1a1          75 IH--HNCTPEFQANE--------------VRKVKKYEQYPLASKDAKKQLLCGAAIGTHEDDKYR---------------  123 (362)
T ss_dssp             EC--CSSCHHHHHHH--------------HHHHHTSCCCTTCCBCTTSCBCCEEEECSSTHHHHH---------------
T ss_pred             CC--CCCCHHHHHHH--------------HHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHH---------------
T ss_conf             00--15998999999--------------999999853132012233420104546779638989---------------


Q ss_pred             CCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHC-CCCEEEEECCCHHHHHHHH
Q ss_conf             133437887753013421333344302577771567778763045456989999998737-9848997079999999999
Q batch____       185 AVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFW-DGPMVIKGILDPEDARDAV  263 (396)
Q Consensus       185 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr~~~-~~PvivKgi~~~eda~~a~  263 (396)
                             ...+...+....+.+..+.                  ++...|+.++|+++.+ ++|+++|++.++++|+.+.
T Consensus       124 -------~~~~~~~~~~~i~i~~~~~------------------~~~~~~e~i~~lr~~~~~vpii~k~v~s~e~a~~l~  178 (362)
T d1jr1a1         124 -------LDLLALAGVDVVVLDSSQG------------------NSIFQINMIKYMKEKYPNLQVIGGNVVTAAQAKNLI  178 (362)
T ss_dssp             -------HHHHHHHTCCEEEECCSSC------------------CSHHHHHHHHHHHHHSTTCEEEEEEECSHHHHHHHH
T ss_pred             -------HHHHHHCCCCEEEEECCCC------------------CCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH
T ss_conf             -------9988514997899836888------------------720258899999872782328975768999999999


Q ss_pred             HCCCCEEEECCCCCCCCCCCC------CHHHHHHHHHHHCCC-CCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHH---
Q ss_conf             769989998778888766545------779999999996178-9779996687899999999971778743203999---
Q batch____       264 RFGADGIVVSNHGGRQLDGVL------SSARALPAIADAVKG-DIAILADSGIRNGLDVVRMIALGADTVLLGRAFL---  333 (396)
Q Consensus       264 ~~Gvd~I~VsnhGGr~ld~~~------~t~~~L~~i~~av~~-~v~Ii~dGGIr~G~DV~KaLALGA~aV~iGrp~l---  333 (396)
                      ++|+|+|+||||||+++++.+      |++.+|.++++.... ++|||+|||||+|.|++||||||||+|++||+|+   
T Consensus       179 ~aGad~I~V~g~gG~~~~~~~~~~~g~p~~~~l~~~~~~~~~~~ipVIa~GGIr~g~Di~KALalGAdaV~iGt~fl~t~  258 (362)
T d1jr1a1         179 DAGVDALRVGMGCGSICITQEVLACGRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATT  258 (362)
T ss_dssp             HHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBT
T ss_pred             HCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHCC
T ss_conf             77998999828787756665545656641889999998721179749997787898999999972677868682655044


Q ss_pred             ----------------------HHHHCCCHHH----------HHHHHHHHHHHHHHHHHHHCCCCHHHCCH-HHCCCCCC
Q ss_conf             ----------------------9863076899----------99999999999999999808995568297-75016542
Q batch____       334 ----------------------YALATAGQAG----------VANLLNLIEKEMKVAMTLTGAKSISEITQ-DSLVQGLG  380 (396)
Q Consensus       334 ----------------------~ala~~G~~g----------v~~~l~~l~~El~~~m~l~G~~si~el~~-~~l~~~~~  380 (396)
                                            +++.....+|          |.++|+.+++||+..|.+||+++|+||.+ .+..+...
T Consensus       259 Es~g~~~~~~~~~~k~~~G~a~~~~~~~~~eG~~~~~~~~~~v~~~l~~~~~~l~~~m~~~Ga~~i~elr~~~~~~~~~~  338 (362)
T d1jr1a1         259 EAPGEYFFSDGIRLKKYRGMGSLDAMIKVAQGVSGAVQDKGSIHKFVPYLIAGIQHSCQDIGAKSLTQVRAMMYSGELKF  338 (362)
T ss_dssp             TSSSCCEESSSCEEEEEECTTSTTTCCCCCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHHHHSCSCE
T ss_pred             CCCCCHHHCCCCHHCCCCCCCCHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCE
T ss_conf             36632110276001000474432443115356110245542089999999999999999808783899985001364110


Q ss_pred             CCCHHCCCCCCCCCC
Q ss_conf             000101273534347
Q batch____       381 KELPAALAPMAKGNA  395 (396)
Q Consensus       381 ~~~~~~~~~~~~~~~  395 (396)
                      .+..++..-...+|.
T Consensus       339 ~~~~~~~~~e~~~h~  353 (362)
T d1jr1a1         339 EKRTSSAQVEGGVHS  353 (362)
T ss_dssp             EECCHHHHHHHSCCS
T ss_pred             EHHHHHHHHHCCCCC
T ss_conf             101112322136664