13 d1jcna1 Probab=100.00  E-value=0  Score=358.84  Aligned_columns=302  Identities=17%

Q ss_pred             HCCCCCHHHHHHHHHHHHHCEECCCCC-CCCCCCCCEEEECCE-EECCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEE
Q ss_conf             248765188998787788403427558-998777346898887-614883653210013135103799999999779838
Q batch____        26 DGGAYSEYTLRRNVEDLSEVALRQRIL-KNMSDLSLETTLFNE-KLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPF  103 (396)
Q Consensus        26 ~~g~~~e~t~~~N~~af~~~~l~pr~L-~d~~~vdlst~ilG~-~~~~Pi~iapm~~~~~~~~~~e~~lAraA~~~G~~~  103 (396)
                      +|+++|+.+.++|...||+++|+|+.+ +++++|||||+|+|+ ++++||++|||++..      +..+|.++++.|...
T Consensus         7 d~~~~~~~~~~~~~~~fddv~l~P~~~~~~~~~vdlst~l~g~l~l~~Pii~apM~g~s------~~~lA~a~a~~Gglg   80 (320)
T d1jcna1           7 DGLTAQQLFASADDLTYNDFLILPGFIDFIADEVDLTSALTRKITLKTPLISSPMDTVT------EADMAIAMALMGGIG   80 (320)
T ss_dssp             CCBCHHHHTTSSSCCCGGGEEECCCCCCSCGGGCBCCEESSSSCEESSCEEECCCTTTC------SHHHHHHHHHTTCEE
T ss_pred             CCCCCHHHCCCCCCCCHHHEEEECCCCCCCHHHCCCCEEECCCCCCCCCEEECCCCCCC------CHHHHHHHHHCCCEE
T ss_conf             56651221135666862552450775799853483603200146756345752765678------999999999879817


Q ss_pred             EECCCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCC
Q ss_conf             97367768889986205887044100357878899999976654982898605655348784676410122322211111
Q batch____       104 TLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYL  183 (396)
Q Consensus       104 ~lgs~~~~~~eev~~~~~~~~~fqly~~~d~~~~~~li~~a~~~G~~al~~tvD~~~~g~r~~d~~~~~~~~~~~~~~~~  183 (396)
                      +++  ++.+.++..+......++..+....                                    +.............
T Consensus        81 ~i~--~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~  122 (320)
T d1jcna1          81 FIH--HNCTPEFQANEVRKVKNFEDYPLAS------------------------------------KDSQKQLLCGAAVG  122 (320)
T ss_dssp             EEC--CSSCHHHHHHHHHHHHTCCCCTTCC------------------------------------BCTTSCBCCEEEEC
T ss_pred             EEE--CCCCHHHHHHHHHHHHHHHHCCCCC------------------------------------CCCCCCCCCCCCCC
T ss_conf             860--7899899999999899864011101------------------------------------12334431141015


Q ss_pred             CCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCC-CCEEEEECCCHHHHHHH
Q ss_conf             11334378877530134213333443025777715677787630454569899999987379-84899707999999999
Q batch____       184 QAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWD-GPMVIKGILDPEDARDA  262 (396)
Q Consensus       184 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr~~~~-~PvivKgi~~~eda~~a  262 (396)
                      ....................+.+..+                  ..+...|+.++|+++.++ +|+++|++++++||+.+
T Consensus       123 ~~~~~~~~~~~~~~a~~~~~~~~~~~------------------~~~~~~~~~i~~i~~~~~~~piivk~v~s~edA~~a  184 (320)
T d1jcna1         123 TREDDKYRLDLLTQAGVDVIVLDSSQ------------------GNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNL  184 (320)
T ss_dssp             SSTTHHHHHHHHHHTTCSEEEECCSC------------------CCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCEEEECCCC------------------CCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHH
T ss_conf             78768989999984399778812677------------------765310236999997268662998166899999999


Q ss_pred             HHCCCCEEEECCCCCCCCCC------CCCHHHHHHHHHHHC-CCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHH
Q ss_conf             97699899987788887665------457799999999961-78977999668789999999997177874320399998
Q batch____       263 VRFGADGIVVSNHGGRQLDG------VLSSARALPAIADAV-KGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYA  335 (396)
Q Consensus       263 ~~~Gvd~I~VsnhGGr~ld~------~~~t~~~L~~i~~av-~~~v~Ii~dGGIr~G~DV~KaLALGA~aV~iGrp~l~a  335 (396)
                      .++|+|+|+|||||||++++      +.+++..+.++++.. +.++|||+|||||+|.||+||||||||+|++||||+|+
T Consensus       185 ~~aGvd~I~Vsg~gG~~~~~~~~~~~~~p~i~~~~~~~~~~~~~~vpViadGGIr~g~Dv~kALaLGAdaV~iGr~fl~~  264 (320)
T d1jcna1         185 IDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAAT  264 (320)
T ss_dssp             HHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTS
T ss_pred             HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHH
T ss_conf             96799899971768875665423565553100147889840348974999788579899999997389899988077744


Q ss_pred             HHCCCHHH-HHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCHHCCCCCCC
Q ss_conf             63076899-9999999999999999980899556829775016542000101273534
Q batch____       336 LATAGQAG-VANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAK  392 (396)
Q Consensus       336 la~~G~~g-v~~~l~~l~~El~~~m~l~G~~si~el~~~~l~~~~~~~~~~~~~~~~~  392 (396)
                      +..+|++| |.++++.|++||+.+|+++|++|++|| ++.+.++..+  -+.|..+++
T Consensus       265 ~ea~G~~g~v~~~i~~l~~el~~~m~l~G~~si~eL-~~~~~~~~~~--~~~~~~~a~  319 (320)
T d1jcna1         265 TEAPGEKGSIQKFVPYLIAGIQHGCQDIGARSLSVL-RSMMYSGELK--FEKRTMSAQ  319 (320)
T ss_dssp             TTSSCCCCCHHHHHHHHHHHHHHHHHHHTCSBHHHH-HHHHHTTCSC--EEECCSSCC
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH-HHHHCCCCCE--EECCCCCCC
T ss_conf             416887207999999999999999998188938999-7511056610--000764457