390 c3pm6B_ Probab=40.17   E-value=24  Score=15.02  Aligned_columns=220  Identities=15%

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCC----------CHHHHHHCCCCCEEEEECCCCCHHHHHHHHH-HHH
Q ss_conf             21001313510379999999977983897367768----------8899862058870441003578788999999-766
Q batch____        77 PVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVC----------PIEEVAPAIKRPMWFQLYVLRDRGFMRNALE-RAK  145 (396)
Q Consensus        77 pm~~~~~~~~~~e~~lAraA~~~G~~~~lgs~~~~----------~~eev~~~~~~~~~fqly~~~d~~~~~~li~-~a~  145 (396)
                      +.+.-...+.+.-.++-+||++.+.|.++......          .+...+....-|-...|-.-.+.+.....+. ..-
T Consensus        21 AV~AfNv~n~e~~~avi~AAe~~~sPvIiq~s~~~~~~~g~~~~~~~~~~A~~~~VPValHLDH~~~~e~i~~ai~~~~~  100 (264)
T c3pm6B_          21 AIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVPITLHLDHAQDPEIIKRAADLSRS  100 (264)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHSSSCEEEEEEEECCHHHHHHHHHTTCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCC
T ss_conf             48730448999999999999960999999957578851189999999999853799599984776898999999841341


Q ss_pred             HCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             54982898605655348784676410122322211111113343788775301342133334430257777156777876
Q batch____       146 AAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG  225 (396)
Q Consensus       146 ~~G~~al~~tvD~~~~g~r~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (396)
                      .+||..+++                                          -.+......|+..-               
T Consensus       101 ~~GFtSVMi------------------------------------------DgS~lp~eeNi~~T---------------  123 (264)
T c3pm6B_         101 EPGFDSIMV------------------------------------------DMSHFSKEENLRLT---------------  123 (264)
T ss_dssp             CCCCSEEEE------------------------------------------CCTTSCHHHHHHHH---------------
T ss_pred             CCCCCEEEE------------------------------------------ECCCCCHHHHHHHH---------------
T ss_conf             479874532------------------------------------------10028989999999---------------


Q ss_pred             HCCCCCCCHHHHHHHHHHCCCCEEEE--ECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE
Q ss_conf             30454569899999987379848997--0799999999997699899987788887665457799999999961789779
Q batch____       226 NNFDPSISWKDLEWIRDFWDGPMVIK--GILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAI  303 (396)
Q Consensus       226 ~~~~~~~~~~~i~~lr~~~~~PvivK--gi~~~eda~~a~~~Gvd~I~VsnhGGr~ld~~~~t~~~L~~i~~av~~~v~I  303 (396)
                               ..+.++....+++|=.-  -+..||+|+.-++.|+|.+-||..-        --.+.|.+|.+++..++|+
T Consensus       124 ---------~~vv~~Ah~~gv~VEaElG~~T~peea~~FveTgvD~LAvaiGt--------L~~e~l~~I~~~v~~~vPL  186 (264)
T c3pm6B_         124 ---------RELVAYCNARGIATEAEPGVLTTPEESEEFVATGINWLAPAFGN--------LDYERLQRINEAVGERVGL  186 (264)
T ss_dssp             ---------HHHHHHHHTTTCEEEECCCCCCCHHHHHHHHTTTCSEECCCSCC--------CCHHHHHHHHHHHTTTSEE
T ss_pred             ---------HHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHCCCEEEEECCC--------CCHHHHHHHHHHHCCCCCE
T ss_conf             ---------99999997479847875115569899999998489889763076--------8989999999982789979


Q ss_pred             EEECCCCCHHHHHHH-HHCCCCEEEECHHHHHHHHC---------CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
Q ss_conf             996687899999999-97177874320399998630---------76899999999999999999998089955682
Q batch____       304 LADSGIRNGLDVVRM-IALGADTVLLGRAFLYALAT---------AGQAGVANLLNLIEKEMKVAMTLTGAKSISEI  370 (396)
Q Consensus       304 i~dGGIr~G~DV~Ka-LALGA~aV~iGrp~l~ala~---------~G~~gv~~~l~~l~~El~~~m~l~G~~si~el  370 (396)
                      ..-||=-.+.|-++. +.+|-.=|-+++-+.++...         .-..-.....+.+++.++..|.++|...=.+.
T Consensus       187 VlHGgSG~~~e~~~~ai~~GI~KiNi~T~l~~a~~~~~~e~~~~~~~~~~~~~~~~~~~~~v~~~i~~~gS~gkA~~  263 (264)
T c3pm6B_         187 VLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGKAEF  263 (264)
T ss_dssp             EECSCTTCCHHHHHHHHHTTEEEEEESHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTTCTTGGGG
T ss_pred             EEECCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             99679877989999999729965812118999999999962035881467799999999999999998398874221