BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (376 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit b... 356 6e-97 UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit bet... 345 2e-93 UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subun... 340 6e-92 UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit bet... 326 1e-87 UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 ... 320 6e-86 UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 ... 305 1e-81 UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornu... 300 6e-80 UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain ... 293 9e-78 UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative... 290 4e-77 UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain... 286 9e-76 UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit bet... 286 9e-76 UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepI... 284 3e-75 UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprino... 283 5e-75 UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit bet... 283 5e-75 UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit bet... 281 3e-74 UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclass... 280 5e-74 UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 280 7e-74 UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subun... 275 2e-72 UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit bet... 275 2e-72 UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subuni... 272 1e-71 UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subun... 271 3e-71 UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=S... 270 4e-71 UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=roo... 270 5e-71 UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=r... 265 2e-69 UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 T... 264 3e-69 UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Ver... 263 8e-69 UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=... 261 3e-68 UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subun... 261 4e-68 UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subun... 261 4e-68 UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit bet... 260 4e-68 UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Pr... 259 1e-67 UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subuni... 258 3e-67 UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Ba... 257 6e-67 UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 257 6e-67 UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 256 7e-67 UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_S... 255 3e-66 UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 255 3e-66 UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 T... 254 3e-66 UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=... 253 8e-66 UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain ... 251 3e-65 UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain... 249 1e-64 UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain... 246 1e-63 UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase be... 245 1e-63 UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Ba... 245 3e-63 UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase sm... 242 2e-62 UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subuni... 241 2e-62 UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=ce... 241 3e-62 UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subuni... 241 3e-62 UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=A... 241 4e-62 UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subuni... 240 5e-62 UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD 239 1e-61 UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate redu... 239 1e-61 UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subuni... 238 3e-61 UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subun... 236 8e-61 UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain ... 236 1e-60 UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain... 231 4e-59 UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subu... 228 2e-58 UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain... 226 8e-58 UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase sm... 225 2e-57 UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit bet... 224 3e-57 UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diph... 223 6e-57 UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chai... 223 7e-57 UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta sub... 223 9e-57 UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subun... 223 1e-56 UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit bet... 221 2e-56 UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib be... 221 2e-56 UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystiviru... 221 4e-56 UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subu... 219 1e-55 UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosph... 219 1e-55 UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain ... 219 1e-55 UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit bet... 217 5e-55 UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 217 6e-55 UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subun... 216 8e-55 UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 216 1e-54 UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta sub... 216 1e-54 UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Dei... 210 7e-53 UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subuni... 209 2e-52 UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Ba... 203 1e-50 UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7... 201 3e-50 UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit bet... 201 3e-50 UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subun... 199 1e-49 UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderw... 194 4e-48 UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain ... 191 2e-47 UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 ... 187 6e-46 UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome s... 186 9e-46 UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), ... 185 3e-45 UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderw... 182 2e-44 UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_... 181 5e-44 UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclass... 179 2e-43 UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain... 178 4e-43 UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 T... 177 7e-43 UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseud... 175 2e-42 UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium ... 173 1e-41 UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Mar... 172 2e-41 UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Envi... 171 5e-41 UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain... 170 7e-41 UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subun... 168 3e-40 UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida... 166 1e-39 UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain... 163 8e-39 UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepI... 163 1e-38 UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain ... 159 2e-37 UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib be... 158 3e-37 UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, s... 156 2e-36 UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative ... 152 2e-35 UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain ... 145 2e-33 UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=C... 143 9e-33 UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepI... 142 1e-32 UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Bru... 142 2e-32 UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomy... 142 3e-32 UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena t... 139 1e-31 UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theil... 139 2e-31 UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomyc... 137 4e-31 UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae... 137 5e-31 UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Coryne... 136 1e-30 UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subuni... 134 4e-30 UniRef50_D2S309 Ribonucleotide reductase beta subunit-like prote... 134 6e-30 UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomy... 133 9e-30 UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC... 131 4e-29 UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n... 131 5e-29 UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyos... 127 6e-28 UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH 127 7e-28 UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus Rep... 124 4e-27 UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexiba... 124 4e-27 UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema m... 124 7e-27 UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment... 123 1e-26 UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes a... 118 3e-25 UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS 118 4e-25 UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae Rep... 117 5e-25 UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=M... 117 6e-25 UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like prote... 114 5e-24 UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, b... 114 5e-24 UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Ge... 112 2e-23 UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=G... 107 8e-22 UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Su... 106 2e-21 UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus... 105 3e-21 UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolo... 104 7e-21 UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenul... 102 2e-20 UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Con... 101 5e-20 UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, b... 92 2e-17 UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subuni... 88 5e-16 UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sa... 86 2e-15 UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain... 84 9e-15 UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome s... 81 6e-14 UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 T... 70 1e-10 UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment... 65 5e-09 UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, s... 57 1e-06 UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia... 52 3e-05 UniRef50_B2H6U3 Conserved protein n=8 Tax=Bacteria RepID=B2H6U3_... 49 2e-04 UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, s... 48 5e-04 UniRef50_UPI0001AF6C58 hypothetical protein MkanA1_14310 n=1 Tax... 47 0.001 UniRef50_C1V565 Putative uncharacterized protein n=1 Tax=Halogeo... 47 0.001 UniRef50_A4X8S2 Putative uncharacterized protein n=1 Tax=Salinis... 47 0.002 UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacter... 45 0.004 UniRef50_Q47J53 Putative uncharacterized protein n=3 Tax=Proteob... 44 0.008 UniRef50_Q4J6K5 Conserved protein n=13 Tax=Sulfolobaceae RepID=Q... 44 0.008 UniRef50_B2HNZ6 Putative uncharacterized protein n=7 Tax=Bacteri... 42 0.026 UniRef50_A4CGF1 2-oxoglutarate dehydrogenase, E1 component n=27 ... 42 0.026 UniRef50_A6GD89 Putative uncharacterized protein n=1 Tax=Plesioc... 42 0.031 >UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit beta n=294 Tax=root RepID=RIR2_ECO57 Length = 376 Score = 356 bits (914), Expect = 6e-97, Method: Composition-based stats. Identities = 376/376 (100%), Positives = 376/376 (100%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR Sbjct: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS Sbjct: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG Sbjct: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA Sbjct: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL Sbjct: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDSEVDTDDLSNFQL Sbjct: 361 QIDSEVDTDDLSNFQL 376 >UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit beta n=58 Tax=root RepID=RIR2_HAEIN Length = 376 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 321/376 (85%), Positives = 346/376 (92%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQ KNDQLKEPMFFGQ VNVARYDQQKY+ FEKLIEKQLSFFWRPEEVDVS+DR Sbjct: 1 MAYTTFSQNKNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDY ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPL+SIPELETW+ETW FSETIHS Sbjct: 61 IDYAALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPS+VFDDIVTNE+I KRA+ ISSYYD+LI + + L GEGT+TV+G Sbjct: 121 RSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYGLYGEGTYTVDG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K V+LR LKK+LYLCLMSVNALEAIRFYVSFACSFAFAER LMEGNAKII+ IARDEA Sbjct: 181 KECVVTLRSLKKQLYLCLMSVNALEAIRFYVSFACSFAFAERRLMEGNAKIIKFIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQH+LN++ +G DDPEMAEIAEECKQE YDLFV AA+QEK WADYLF+DGSMIGL Sbjct: 241 LHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N+DIL QYVEYITNIRMQAVGL LPFQTRSNPIPWIN WLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDS+VDT+D +F L Sbjct: 361 QIDSKVDTNDFDDFSL 376 >UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subunit n=2 Tax=Eukaryota RepID=A8IKH1_CHLRE Length = 493 Score = 340 bits (871), Expect = 6e-92, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 134/363 (36%), Gaps = 49/363 (13%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHI 73 L E + P + KY + ++ ++ FW EEVD + D ID+ L E+ Sbjct: 165 LDEDLLRENPNRFTLFP-IKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRF 223 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 L + D I + + I +PE + E +HS Y+ ++ + V + Sbjct: 224 IKYVLAFFAASDGIVMENLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVRE 283 Query: 134 PSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 P +FD I T + K+AE + Sbjct: 284 PEERNQLFDAIHTIPTVAKKAEWAMRWISS------------------------------ 313 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 L+ +E I F SF F +R LM G + LI+RDE LH + Sbjct: 314 SNVFAERLVGFACVEGIHFSGSFCSIFWLKKRCLMPGLSFSNVLISRDEGLHCDFACCLY 373 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + L++ ++ + +A Q E ++ ++G+N D++ QY+ Sbjct: 374 SHLKNRLS-----------RERVLQIVDEAVQLEDEFCTEALS-CELLGMNADLMRQYIR 421 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 ++ + + ++G + + TR NP W+ ++S + E V Y + + + Sbjct: 422 FVADRLLVSLGYEKHYNTR-NPFDWME--MISLQGKANFFERRVGEYQRAGVMGGNNGNS 478 Query: 371 LSN 373 + Sbjct: 479 ARD 481 >UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit beta n=48 Tax=root RepID=RIR2_BUCBP Length = 376 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 275/376 (73%), Positives = 333/376 (88%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M YTTFS+ KN+QL EPMFFGQ VN++RYDQQKY+IFEKLIEKQLSFFWRPEEVD+SRD Sbjct: 1 MTYTTFSKNKNNQLYEPMFFGQSVNISRYDQQKYEIFEKLIEKQLSFFWRPEEVDLSRDY 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 ID+Q LP+HEKHIF+SNLKYQTLLDSIQGRSPN+ALLP++S+PELETW+ETW+FSETIHS Sbjct: 61 IDFQNLPQHEKHIFVSNLKYQTLLDSIQGRSPNIALLPIVSLPELETWIETWSFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNI+N PS++FDDI+ N+ I RA+ I+ YYD+LIE+TSYWHL GEG HT+NG Sbjct: 121 RSYTHIIRNIINTPSLIFDDIIDNKNIANRAKDIAKYYDDLIELTSYWHLFGEGKHTING 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K + + L ELKKKLYLCL+SVNALEAIRFYVSFACSFAFAERE MEGNAKIIRLIARDEA Sbjct: 181 KKIKIDLHELKKKLYLCLISVNALEAIRFYVSFACSFAFAEREKMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLT TQH+LN+L + ++ M++I++EC +ECY LF++ + QEK WA YLF++GSM+GL Sbjct: 241 LHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGSMLGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N++IL QY+EYITNIRM+A+GL PF+ SNPIPWIN+WL+SDNVQVAPQE+ VSSYL+G Sbjct: 301 NQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWINSWLISDNVQVAPQEISVSSYLIG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QI+SE++ D F+L Sbjct: 361 QINSEINDSDFEKFKL 376 >UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 n=93 Tax=root RepID=RIR2_HUMAN Length = 389 Score = 320 bits (819), Expect = 6e-86, Method: Composition-based stats. Identities = 72/360 (20%), Positives = 133/360 (36%), Gaps = 48/360 (13%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 EP+ P + +Y ++ +K + FW EEVD+S+D +++L E++ Sbjct: 69 DEPLLRENPRRFVIFP-IEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + I E + E IHS Y+ +I + DP Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 +F+ I T ++K+A+ + + + Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGD-----------------------------KE 218 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 +++ A+E I F SFA F +R LM G LI+RDE LH M Sbjct: 219 ATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFK 278 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 L + + ++ + A + E+++ +IG+N ++ QY+E+ Sbjct: 279 HLVHKPSE-----------ERVREIIINAVRIEQEFLTEALP-VKLIGMNCTLMKQYIEF 326 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + + M +G F+ NP ++ +S + E V Y + S + Sbjct: 327 VADRLMLELGFSKVFRVE-NPFDFMEN--ISLEGKTNFFEKRVGEYQRMGVMSSPTENSF 383 >UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 B n=134 Tax=root RepID=RIR2B_HUMAN Length = 351 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 75/373 (20%), Positives = 142/373 (38%), Gaps = 48/373 (12%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 + + ++++ +EP+ + Q Y K+ ++ + FW EEVD+S+D Sbjct: 18 SSSDTNESEIKSNEEPLLRKSSRRFVIFPIQ-YPDIWKMYKQAQASFWTAEEVDLSKDLP 76 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 + L EK+ L + D I + + +PE + E +HS Sbjct: 77 HWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSE 136 Query: 122 SYTHIIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 Y+ +I + DP +F+ I T ++K+A+ + + Sbjct: 137 MYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIAD------------------ 178 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 K +++ A+E + F SFA F +R LM G LI+RD Sbjct: 179 -----------RKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRD 227 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E LH M L + + + ++ V A + E+++ G +I Sbjct: 228 EGLHCDFACLMFQYLVNKPSE-----------ERVREIIVDAVKIEQEFLTEALPVG-LI 275 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 G+N ++ QY+E++ + + +G FQ NP ++ +S + E VS Y Sbjct: 276 GMNCILMKQYIEFVADRLLVELGFSKVFQAE-NPFDFMEN--ISLEGKTNFFEKRVSEYQ 332 Query: 359 VGQIDSEVDTDDL 371 + +E + Sbjct: 333 RFAVMAETTDNVF 345 >UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPK4_PHATR Length = 409 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 67/350 (19%), Positives = 134/350 (38%), Gaps = 50/350 (14%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQT 82 + + ++D + ++ ++ FW +E+D+S D D+ L ++E+H L + Sbjct: 92 SRFSLFP-IEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLAFFA 150 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFD 139 D I + +++PE + E IH +Y +I + ++DP ++F Sbjct: 151 GADGIVVENLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFA 210 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 ++K+A Y L+ Sbjct: 211 AHTKVPSVEKKARWAQRYIGS------------------------------DASFAERLV 240 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + A+E I F +F F +R LM G LI+RDE LH + + + L + Sbjct: 241 AFAAVEGIFFSGAFCSIFWLKKRGLMPGLTFSNELISRDEGLHCSFACQLYSKLERKLSE 300 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + + L +A + EK + G +IG+N ++ QYVE++ + + Sbjct: 301 TD-----------MHKLIGEAVEVEKGFVCDALPVG-LIGMNASLMSQYVEFVADRLLHD 348 Query: 320 VGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 +G + ++ NP W++ ++S + E V Y + + + D Sbjct: 349 LGYRTLYGSK-NPFDWMD--MISLEGKTNFFEKRVGEYQKSGVMASLSDD 395 >UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain n=43 Tax=Bacteria RepID=B4E5V8_BURCJ Length = 403 Score = 293 bits (749), Expect = 9e-78, Method: Composition-based stats. Identities = 84/358 (23%), Positives = 152/358 (42%), Gaps = 28/358 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-- 65 + + + + + GQ +V + KY + + W P+E+++SRD ++ Sbjct: 65 EARVNVADKRIINGQT-DVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPN 123 Query: 66 -LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L E E+ I NL + DS+ + + I+ PE ++ AF E IH+ +Y Sbjct: 124 GLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQ 183 Query: 125 HIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 +I+ ++ D +F+ I+ + E + + HT+ Sbjct: 184 YIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFI-----------------HTLTDPAFK 226 Query: 185 VSLRELKKKLYLCLMSVNA-LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 E +KL L+ +E + FYV F A + M G A+ + I RDE++H Sbjct: 227 TGTLEADQKLLKSLIVFACIMEGLFFYVGFTQILALGRQNKMTGAAEQYQYILRDESMHC 286 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 ++N + ++P + E + E +LF QA + E +A+ G ++GLN Sbjct: 287 NFGIDLINQI--KLENPHLW--TAEFRAEIRELFKQAVELEYRYAEDTMPRG-VLGLNAS 341 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 + Y+ +I+N R Q +GLD F NP PW++ ++ + E V Y G Sbjct: 342 MFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSE-MIDLKKERNFFETRVIEYQTGG 398 >UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative n=11 Tax=root RepID=Q5K9L8_CRYNE Length = 430 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 127/350 (36%), Gaps = 50/350 (14%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFIS 76 + + KY+ + + + FW EE+D D ID+ + E E+ + Sbjct: 102 ILRESESRFVLFP-IKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQERFFILR 160 Query: 77 NLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 L + D I G + + I E + + E +HS +Y+ +I V D Sbjct: 161 ILAFFAASDGIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQE 220 Query: 137 ---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 +F + I+++A+ Y + + Sbjct: 221 KDFLFRGMTNIPCIKQKADWALKYITDELP------------------------------ 250 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLL 253 L++ +E I F SFA F +R LM G LI+RDE +H + N L Sbjct: 251 FRTRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLYNHL 310 Query: 254 RSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYIT 313 + E + + +A EK + ++IG+N ++CQY+E++ Sbjct: 311 KHRCST-----------DEVHHIVSEALVIEKQFLTDALP-CALIGINAHLMCQYMEFVA 358 Query: 314 NIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + +G + NP W+ L+S + E VS+Y + Sbjct: 359 DRLVVDLGYPKIYNAT-NPFDWME--LISLQGKANFFESRVSAYQKANVS 405 >UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain 1 n=151 Tax=root RepID=RIR2_YEAST Length = 399 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 138/361 (38%), Gaps = 49/361 (13%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-L 66 + K + +EP+ + KY + ++ + FW EE+D+S+D D+ + Sbjct: 68 KLKEMEKEEPLLNEDKERTVLFP-IKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRM 126 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 E+E+ L + D I + + IPE +++ E IHS +Y+ + Sbjct: 127 NENERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLL 186 Query: 127 IRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 I + DP +F+ I T +I ++AE + + Sbjct: 187 IDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQD----------------------- 223 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 L++ ++E + F SFA F +R +M G LI RDE LH Sbjct: 224 ------ADALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHT 277 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 + L++ D + +A + E+ + +++G+N D Sbjct: 278 DFACLLFAHLKNKPDP-----------AIVEKIVTEAVEIEQRYFLDALP-VALLGMNAD 325 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 ++ QYVE++ + + A G ++ NP ++ +S + E VS Y + Sbjct: 326 LMNQYVEFVADRLLVAFGNKKYYKVE-NPFDFMEN--ISLAGKTNFFEKRVSDYQKAGVM 382 Query: 364 S 364 S Sbjct: 383 S 383 >UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Epsilonproteobacteria RepID=RIR2_HELPJ Length = 341 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 87/364 (23%), Positives = 165/364 (45%), Gaps = 34/364 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + + +F G P ++ ++ KY + L + L+ W EEV ++ D+ DY L Sbjct: 12 NSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLS 71 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 EK + L +DS+Q + + P I+ PE+ + A+ E +HS +Y ++ Sbjct: 72 AEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMV 131 Query: 128 RNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 +I + ++D + Q++ + + I+ Y EL + + Sbjct: 132 ESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPT--------------------- 170 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 ++ + L + LE I FY F+ + A M G+A++IR I RDE HL Q Sbjct: 171 ---EENILKALFANQILEGIYFYSGFSYFYTLARSGKMLGSAQMIRFIQRDEVTHLILFQ 227 Query: 248 HMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQ 307 +M+N LR+ D + E ++F +A + E W DY+ + G ++GL ++ Q Sbjct: 228 NMINALRNERAD----LFTPQLINEVIEMFKKAVEIEASWGDYITQ-GKILGLTSSLIEQ 282 Query: 308 YVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 Y++++ + R+ VG+ + + +PI W+ ++ + + E VS+Y G + Sbjct: 283 YIQFLADSRLSKVGIAKVYGVQ-HPIKWVESFSSFNEQRSNFFEARVSNYAKGSV----S 337 Query: 368 TDDL 371 DD Sbjct: 338 FDDF 341 >UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepID=D1BPH6_VEIPT Length = 342 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 91/371 (24%), Positives = 169/371 (45%), Gaps = 37/371 (9%) Query: 5 TFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F++ D+ + M G N+ +++ KYD ++ L+ FW PEE+ ++ D + Sbjct: 6 IFNENG-DRGTQSMIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDVKQFP 64 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L ++E+ F + + LDSIQ + L I+ E+ + + AF E IH++SY+ Sbjct: 65 YLTDYERRAFDKIIAFLNFLDSIQSENL-PNLSRYITASEVASLLNIQAFQEEIHAQSYS 123 Query: 125 HIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +I+ + N ++D+ T++ + +R I+ Y + S Sbjct: 124 YILDTVTNPITRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEA-------------- 169 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L +++ LE I FY F+ + A + M + I + I RDE H Sbjct: 170 ----------NLIHTIIANYILEGIYFYSGFSFFYTLARQGKMTATSTIFKYINRDEVTH 219 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 L Q+++ LR D E + + D+ Q A+ E W Y+ D ++GLN Sbjct: 220 LVLFQNIIRELRRERPD----LFTPELEAKITDMIRQGAENEIAWGQYITDD-KILGLNN 274 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ +Y++Y+ NIR++A+GL + + NP+ WI ++ ++ + E +V++Y Sbjct: 275 VLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKAA 334 Query: 362 IDSEVDTDDLS 372 D DDL Sbjct: 335 ---AFDFDDLE 342 >UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NX45_COPC7 Length = 386 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 119/352 (33%), Gaps = 70/352 (19%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + Y Q Y ++ + FW EE+D+S D +D+ L E+H Sbjct: 32 EEPLLKPSPKRLTLYPIQ-YPEIWTHYKRAQASFWTAEEIDLSHDMMDWSKLTNAERHFL 90 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + +PE + E +HS +Y+ +I + DP Sbjct: 91 SRILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDP 150 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 +F I T IQ++AE ++ + Sbjct: 151 EERDFLFRAIETIPSIQRKAEWALTW-----------------------------TSDKS 181 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 L++ +E + F SFA F +R L+ G LI+RDE +H + Sbjct: 182 TTFAERLVAFAVVEGVFFSGSFAAIFWMRKRGLLPGLTFSNELISRDEGMHTDFACLLFA 241 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 LR + +A + EK++ + Sbjct: 242 YLRKRP-----------HSDTILAIVTEAVEIEKEF-----------------------F 267 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + ++G D + NP ++ L+S + E VS Y + Sbjct: 268 SADRLLTSLGNDKHYHVD-NPFDFME--LISMEGKANFFEKRVSDYAKANVS 316 >UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit beta n=4 Tax=Campylobacterales RepID=C3XIX4_9HELI Length = 351 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 85/361 (23%), Positives = 163/361 (45%), Gaps = 30/361 (8%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + + +F G P + ++ KY L+ + W PEEV++++D+ DY L Sbjct: 21 HSTESVNERRIFGGNPTAIFELNKIKYQWAYNLLRTMFANTWFPEEVNMNQDKRDYMELT 80 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 EK + L +DS+Q + + P I+ PE+ + AF E++H++SY ++ Sbjct: 81 LQEKQGYDRALAQLIFMDSLQTNNLTDNINPYITCPEINMLLVRQAFEESLHAQSYAVMV 140 Query: 128 RNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 +I + ++ +++++ + + I+ Y +L + + Sbjct: 141 DSISANTDEIYQMWRKDDKLRSKNDYIADVYTDLAKNPTET------------------- 181 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 L + + LE I FY FA + A M+ +A++IR I RDE HLT Sbjct: 182 -----NLIKAMFANQILEGIYFYSGFAFFYTLARSGKMQNSAEMIRFIQRDEITHLT--- 233 Query: 248 HMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQ 307 + + + + E ++F QA E W +Y+ + G ++GL I+ Q Sbjct: 234 -IFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWGEYITQ-GQILGLTAKIIRQ 291 Query: 308 YVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 Y+EY+ + R++AV + + T+ NPI W++ + +N + E +V +Y G++ E D Sbjct: 292 YIEYLADKRLKAVDYPILYNTQ-NPIQWVDEQVNFNNQRTNFFEAKVRNYTRGELKFEDD 350 Query: 368 T 368 Sbjct: 351 F 351 >UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit beta n=80 Tax=Bacteria RepID=RIR2_TREPA Length = 351 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 149/366 (40%), Gaps = 36/366 (9%) Query: 6 FSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F++ + + K M G N+ ++ KY K + ++ FW PEE+++S D DY+ Sbjct: 14 FNEAGDIELHKRRMVGGNTTNLNDFNNMKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYR 73 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L EK + L + LDSIQ + + I+ E+ + AF E +HS+SY+ Sbjct: 74 NLSAIEKTAYDKILSFLIFLDSIQTANL-PNIGQYITANEINLCLTIQAFQEAVHSQSYS 132 Query: 125 HIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +++ I + + +E + R + I + Y+E + S Sbjct: 133 YMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFQDDKSVL-------------- 178 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L ++ LE I FY F + M G+ + IR I RDE H Sbjct: 179 ----------ALLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENTH 228 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 L + + E + D+ + +QE W DY+ D + GLN+ Sbjct: 229 L----WLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGD-QIPGLNR 283 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 ++ Y+ Y+ N+R + +G + ++ + W++ + ++ ++ E + ++Y Sbjct: 284 HMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYAK 343 Query: 360 GQIDSE 365 + Sbjct: 344 SSAMVD 349 >UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclassified Phycodnaviridae RepID=C7U0I3_9PHYC Length = 389 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 75/360 (20%), Positives = 141/360 (39%), Gaps = 50/360 (13%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 ++ EP+ + KY +L +K W EEVD+S+D D++ L E+E+ Sbjct: 70 EEEYEPILASTLNRFTVFP-LKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQ 128 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 L + D I + N + I E ++ +E +H +Y+ +I + Sbjct: 129 KFIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYI 188 Query: 132 NDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 DP +F+ I T I+K+A+ ++D Sbjct: 189 KDPSEKKELFEAIQTVPCIEKKAQWAMKWFD----------------------------- 219 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 + L + +E I F SF F +R LM G LI+RDE LH Sbjct: 220 TKSRSFAERLFAFACVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHQEFAVE 279 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 + LR+ + + +A EK + ++IG+N + + +Y Sbjct: 280 LFKTLRNRPG-----------VDTIHAIVREAVDIEKGFILDALP-CNLIGMNSEKMSEY 327 Query: 309 VEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 +EY+++ ++ +G+ + ++ NP ++ +S + + E V Y G++D + D Sbjct: 328 IEYVSDRLLKQIGVPTIWNSK-NPFDFMEN--ISLDGKTNFFEKRVGDY--GKLDDDTDE 382 >UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C8WWZ0_ALIAD Length = 369 Score = 280 bits (715), Expect = 7e-74, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 166/368 (45%), Gaps = 36/368 (9%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQAL 66 ++ D K + G N+ + KY+ KL ++ FW PEE+ ++ D Y L Sbjct: 35 AEGDRDWGKRRIIGGNTTNMIELNNIKYEWAYKLYRAMMNNFWIPEEIPLADDARQYDLL 94 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 + E+ + L + +DS+ + + I+ PE+ + AF E +HS+SY ++ Sbjct: 95 SDDERRSYNKVLSFLIFMDSLLTHNL-PNINEYITAPEVNLCLTVHAFQEAVHSQSYGYV 153 Query: 127 IRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 + ++VN ++++ ++ + +R + I+ ++E IE + Sbjct: 154 LDSVVNPATRDQIYNEWRNDDHLLRRNQFITDLFEEFIENPT------------------ 195 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 + L +++ LE + FY F F + M G I+ I RDE HL Sbjct: 196 ------DRNLMKTIVANYILEGVYFYAGFGFFFVLGRQGKMLGTVSEIKFIQRDELTHLA 249 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 +++ + + + + ++E ++ A Q E W Y+ + G ++GL + Sbjct: 250 IFRNLYHEIIRENP----GIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQ-GKIVGLTDAL 304 Query: 305 LCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + Y++Y+ N+R+Q++ L + + + +P+PW++++ ++ + E V++Y Sbjct: 305 IDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA--- 361 Query: 364 SEVDTDDL 371 ++ DDL Sbjct: 362 GNLNWDDL 369 >UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Firmicutes RepID=C9LBQ7_RUMHA Length = 359 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 79/362 (21%), Positives = 155/362 (42%), Gaps = 36/362 (9%) Query: 6 FSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F+ + + D M G N+ ++ +Y + + ++ FW PEE+++S+DR DY Sbjct: 22 FNPSGDTDVRFRRMIGGNTTNLNDFNNMRYGWVKGWYRQAMNNFWIPEEINLSQDRKDYG 81 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L E+ + L + LDSIQ + + I+ E+ + F E +HS+SY+ Sbjct: 82 ELLGKERQAYDKILSFLVFLDSIQSANL-PCIGEYITANEINLCLSIQTFQECVHSQSYS 140 Query: 125 HIIRNIV--NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +++ I + + T+E++ KR I Y+E + Sbjct: 141 YMLDTICSPEKRNEILYQWKTDERLLKRNTFIGELYNEFQMKKDSF-------------- 186 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L +M+ LE I FY F + + M G+A+ IR I RDE H Sbjct: 187 ----------TLLKVMMANYILEGIYFYSGFMFFYNLSRNGKMPGSAQEIRYINRDENTH 236 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 L + + + E +E Q ++ ++ +QE W Y+ D + G++K Sbjct: 237 L----WLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGD-DIPGISK 291 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQT---RSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +++ +Y++Y+ N+R +G D+ + + W++ + ++ V+ E + ++Y Sbjct: 292 EMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYAK 351 Query: 360 GQ 361 Sbjct: 352 ST 353 >UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit beta n=182 Tax=cellular organisms RepID=RIR2_CHLTR Length = 346 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 70/357 (19%), Positives = 145/357 (40%), Gaps = 27/357 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-- 65 Q + + + + V+V + KY + + W P E+ + +D +++ Sbjct: 10 QKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDR 69 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L E E+ + + NL + + +S+ G + +A+ ++ PE ++ AF E +H+ ++ + Sbjct: 70 LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLY 129 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 I ++ D +F+ I+ + + T V Sbjct: 130 ICESLGLDEKEIFNAYNERAAIKAKDDFQME-----------------ITGKVLDPNFRT 172 Query: 186 SLRELKKKLYLCLMSVN-ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 E ++ L+ +E I FY F +F + M G + + I RDE +HL Sbjct: 173 DSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLN 232 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 ++N ++ + E +QE +L +A E ++A G ++GL + Sbjct: 233 FGIDLINGIKEENPE----IWTPELQQEIVELIKRAVDLEIEYAQDCLPRG-ILGLRASM 287 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 YV++I + R++ +GL + T+ NP PW++ + + + E V Y Sbjct: 288 FIDYVQHIADRRLERIGLKPIYHTK-NPFPWMSETIDLNKEK-NFFETRVIEYQHAA 342 >UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67SN7_SYMTH Length = 346 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 89/366 (24%), Positives = 155/366 (42%), Gaps = 35/366 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + D K + G P N+ KY+ +KL + L FW PEEV + D Y L Sbjct: 14 HGERDWGKRRIIGGNPTNIMELTNVKYEWAQKLSDIMLRNFWIPEEVPLLDDAKQYLELT 73 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 E+ + L + +DSI S L+ ++ PE+ + F E +HS+SY +++ Sbjct: 74 ADEQWAYDRMLSFVIFMDSILTVS-MPNLINYVTAPEINMCLSIHNFHEALHSKSYGYVL 132 Query: 128 RNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 ++V ++D + Q+ +R I++ + + + Sbjct: 133 ESVVPAERRQYIYDLWREDRQLLERNRYIANTFQLFADNPT------------------- 173 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + M+ LE I FY FA +A A M+G A I+ I RDE H+ Sbjct: 174 -----DEHFVRACMAQYVLEGIYFYSGFAFFYALARMGKMKGTATEIQFINRDEITHVAV 228 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 Q++LN LR + + + QAA+ E WA Y + + GL+ ++L Sbjct: 229 FQNILNGLRQERPQ----LFTPQLDADLRAMIRQAAEHEMAWAAYCVGN-RIQGLSGEVL 283 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSE 365 YV+++ + R +A+G + + NPI W+ ++ + + E V++Y Sbjct: 284 QGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKST---N 340 Query: 366 VDTDDL 371 +D DDL Sbjct: 341 IDLDDL 346 >UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB3_9FIRM Length = 347 Score = 271 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 151/359 (42%), Gaps = 35/359 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + D + + G N+ ++ KY + ++ FW PEE+++ +D DY+ LP Sbjct: 13 EGDIDVTQRRLIGGNTTNMNDFNNLKYTWTADWYRQAMNNFWIPEEINLGQDVKDYRQLP 72 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 E+ + L + LDS+Q + + I+ E++ + +F E +HS+SY++++ Sbjct: 73 AAERRAYDKILSFLVFLDSVQSANL-PNVSAYITANEVDLCLTIQSFQECVHSQSYSYML 131 Query: 128 RNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 I ++ + +E + R I Y+E + Sbjct: 132 DTIASPDERQEIIFQWKDDEHLLARNTFIGDLYNEFQQ---------------------- 169 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + ++ L++ LE I FY F + M G+ + IR I RDE HL Sbjct: 170 --EQSRENFLRVLIANYILEGIYFYSGFMFFYNLGRIGRMPGSVQEIRYINRDENTHLWL 227 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 +++L LR+ D E ++ ++ + +QE W Y + + GLN+ ++ Sbjct: 228 FRNILRDLRAEEPD----LFTPEREEMMREMIREGVRQEIAWGKYAIGN-EVEGLNEKMI 282 Query: 306 CQYVEYITNIRMQAVGLDLPF---QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 YV Y+ N R +++GL + + + + W++ + + ++ E ++Y Sbjct: 283 EDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYAKST 341 >UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=Shrimp white spot syndrome virus RepID=Q9INE3_WSSV Length = 413 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 67/368 (18%), Positives = 142/368 (38%), Gaps = 48/368 (13%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 +T + D K + P ++ ++ +K+++ FW EE+D RD D Sbjct: 44 FTKKLIMQVDTFKHLLTRENPNRFVSRPIV-HEDLWEMYKKEVACFWTLEEIDFERDPKD 102 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 ++ L + EK + L + D I + L + IPE ++ + E+IH Sbjct: 103 WEKLTQDEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNV 162 Query: 123 YTHIIRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 Y +I +V D ++F+ I+K+ + ++ + Sbjct: 163 YGELIDRLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQSNND---------------- 206 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 L +++ A+E I F +FA F R ++ G I+RDE Sbjct: 207 --------------LAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGLTSSNEFISRDE 252 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 LH +L ++ ++ +A + E+++ ++G Sbjct: 253 GLHRDFACMLLKKGFVDTP----------SRERILEIVTEAVRIEQEFLTVSLP-VKLVG 301 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +N ++ QY+E++ + + +GL+ + NP P+++ +S + E V+ Y Sbjct: 302 MNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN--ISLENKTNFFEKRVAEYQR 358 Query: 360 GQIDSEVD 367 Q+ + ++ Sbjct: 359 AQVMASIN 366 >UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=root RepID=C4L4U4_EXISA Length = 346 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 79/376 (21%), Positives = 156/376 (41%), Gaps = 37/376 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + K+ + G+ ++ ++ Y F + ++ LS FW P+E+ +S+D Sbjct: 3 IQKIKLLSPKHPNRATAIIGGETSSIVNWNDIAYPQFYTIYKQLLSNFWIPDEISMSKDM 62 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E E+ F + ++LDS+Q R + + + + A E +H+ Sbjct: 63 QQWPQLTEREQDAFKRIIGLLSILDSVQTRYILESSMFSSDSS-VHAVLAVIAQQEVVHN 121 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ ++V + + +F+ +E + KR + I Y+ E + Sbjct: 122 QSYSYVLSSLVPLAEQNRIFNIAKDDEMVMKRNQFILDLYEAFRETPN------------ 169 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++ LE I FY FA + A + M G + +I I RD Sbjct: 170 ------------AENFAKSLVASVILEGINFYSGFAYFYNLARHQKMVGTSTMISYIQRD 217 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H +L + + + + Q YD +A E +W +Y+ RD + Sbjct: 218 EMQHSYFISQLLRAVLTENPK---IDENGQFSQFVYDTMAEAVDLEIEWCEYVLRD--LD 272 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQT-RSNPIPWINTWLVS--DNVQVAPQEVEVS 355 GL+ + YV+Y+ N R++ +GL+ ++ + +PWI + + + E + Sbjct: 273 GLDVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSDFFEQKSR 332 Query: 356 SYLVGQIDSEVDTDDL 371 SY + DDL Sbjct: 333 SYAK--VTDANGFDDL 346 >UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=root RepID=B7GK18_ANOFW Length = 345 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 78/372 (20%), Positives = 154/372 (41%), Gaps = 34/372 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + + + G+ + ++ KY F + + L FW P E+++S D Sbjct: 3 LTKVKLLEPSHPNKATSIINGKASGILNWNDIKYSHFYDIYKMLLGNFWTPFEINMSDDI 62 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + AL E E+ F+ + ++LDS+Q A+ I+ P ++ E +H+ Sbjct: 63 KQWHALSERERDAFLHIIGLLSILDSVQPNFIG-AMKEYITDPSVKAIFSIIEQQEVVHN 121 Query: 121 RSYTHIIRNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ +I +++ F+ TN I KR E + Y+ E + Sbjct: 122 QSYSYVLASIEKLSEQHRAFEMARTNPHIYKRNEHVIRVYEAFREQPTV----------- 170 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++ LE I FY FA + A + M + +I I +D Sbjct: 171 -------------ETFCRALVASLVLEGINFYSGFAFFYNLARNQKMLKTSTMISYINKD 217 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H ++ + ++P++ E YD +A + E +W+ ++ RD + Sbjct: 218 ELCHSYFISQLVRAVL--WENPQIDENGA-FSAWIYDYIDEAIRYETEWSRFVLRD--ID 272 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL--VSDNVQVAPQEVEVSS 356 G++ + +Y+EY+ N R++ +GLD + N +PWI + + + E S Sbjct: 273 GIDVIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGKTDFFEARPRS 332 Query: 357 YLVGQIDSEVDT 368 Y + D Sbjct: 333 YTKTTDVNGFDE 344 >UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI5_9CAUD Length = 367 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 160/369 (43%), Positives = 213/369 (57%), Gaps = 14/369 (3%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 ++ F + N+ FFG PV++ RYD + +K EK LS FWRPEEVD+++D+ Sbjct: 6 QFSVFDPSSNNTGLP--FFGDPVSIQRYDIVAWPFVQKWYEKGLSQFWRPEEVDITKDKA 63 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY L EK I+ SNLK QT+LDSIQG +P A P S PE++ V W E IHS Sbjct: 64 DYATLTPAEKRIYESNLKRQTMLDSIQGAAPFEAFGPWASTPEMQFAVLEWTRQEAIHSL 123 Query: 122 SYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 SYTHI+RN VNDP +VFD ++ +I A IS++YD+++ G Sbjct: 124 SYTHILRNTVNDPGIVFDHVLDVAEIVDCAHQISTHYDDMVR--------YSGMRMAGRA 175 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEA 240 + K+ + L + N LE IRFYVSFACS+AF + ++ MEGNAKIIR IARDE Sbjct: 176 FTREDIMNAKRAFWRALFAANTLEGIRFYVSFACSWAFTQFQKKMEGNAKIIRQIARDEQ 235 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 HL TQ +LN L DP+ I EE + E +F+ QEK WADYLF+DGSM+GL Sbjct: 236 DHLILTQTLLNRL--PGMDPDFEIIREELRGEMTQMFLDVGNQEKQWADYLFQDGSMLGL 293 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQT-RSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 N IL V+++ RM A+G P + + P+PWIN WL + +Q A QE E YL+ Sbjct: 294 NAKILHHMVDWLLTHRMGAIGHPYPGEPRKECPVPWINEWLNNKTMQYALQEAEAPDYLM 353 Query: 360 GQIDSEVDT 368 G + V Sbjct: 354 GVLTGSVSD 362 >UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Verrucomicrobia RepID=C0ACD0_9BACT Length = 362 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 132/361 (36%), Gaps = 29/361 (8%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA---LPEHEKH 72 + + G+ KY L + W PE++ + +D ++ + + E+ Sbjct: 26 KRVINGRETMTFNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERW 85 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 I + Y + + I G + L++ PEL+ + A E IH+ S ++I ++ Sbjct: 86 IIRMGIGYFSAAEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGI 145 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +P I ++ E + + + ++ E K+ Sbjct: 146 NPHECEAMFEDIPTIVRKNEFVVK------------------NSRQLRRDLDLTQPENKQ 187 Query: 193 KLYLCLMSV-NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 L + +E +FY F + + G ++ R RDE+ H+ +++L Sbjct: 188 LLARNMFLFGQCMEGTQFYGLFGMILSLYRQNKFPGIGQMFRYTLRDESNHIEVFRNLLM 247 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 L + K+E + +A EK++ + +GL D Y++Y Sbjct: 248 DLVEENPE----IWTPGFKEELRETMREAVTLEKEFIRDCLP-VNAVGLAVDEFLTYIDY 302 Query: 312 ITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 I + R++ VGL NP+PW+ + Q E V+ Y + D+ Sbjct: 303 IADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQ-NFFEGRVTEYQKASSLAVTHDDE 361 Query: 371 L 371 L Sbjct: 362 L 362 >UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=Actinomycetales RepID=C7NLI2_KYTSD Length = 365 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 74/375 (19%), Positives = 147/375 (39%), Gaps = 31/375 (8%) Query: 1 MAYTTFSQTK-NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRD 59 M T ++ D +K+ P +Y F ++ + W EE+D+ D Sbjct: 15 MTSETHLESDLRDAVKQGSSLLDPGMSLTLRPMRYPQFYEMFRDAIKNTWTVEEIDLHSD 74 Query: 60 RIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 D L E+H+ + + D+I + + L I+ PE ++ F E + Sbjct: 75 LADLHNKLSPAERHLVSRLVAFFATGDTIVANNLVLNLYEHINSPEARLYLSRQLFEEAV 134 Query: 119 HSRSYTHIIRNIVNDPSVVFDDI---VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGT 175 H + Y ++ V D + F+ I+ +AE ++ D + + Sbjct: 135 HVQFYLTLLDTYVPDEAERFEAFAAVENIPSIRTKAEFCFTWIDSIENLGQ--------- 185 Query: 176 HTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLI 235 + + ++ L + +E + FY +FA + R L+ G A + Sbjct: 186 --------LETKEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWV 237 Query: 236 ARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG 295 RDE++H+ ++ +RS D E + + ++A E +A+ L G Sbjct: 238 FRDESMHMAFAFEVVETVRSEEPD----LFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMG 293 Query: 296 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 + GL+ + Y+E + + R +G+ + T+ NP+ ++ V + E VS Sbjct: 294 -VAGLSVADMRAYLENVADRRAVQLGMPEIYGTK-NPLAFMELQDVQEL--SNFFERRVS 349 Query: 356 SYLVGQIDSEVDTDD 370 +Y VG ++ V D+ Sbjct: 350 AYQVG-VEGSVSFDE 363 >UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K6_THERP Length = 328 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 72/349 (20%), Positives = 144/349 (41%), Gaps = 27/349 (7%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKH 72 + + G P+ + +++ W PEEV + D D+ L + E+ Sbjct: 1 MARRLLGGDPLAAVELFPLSHPWAYAHVQQAKHNTWFPEEVPLHDDVRDWHERLSDEERR 60 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 L + ++S+ + ++L ++ PE ++ A+ E H ++ ++I+ + Sbjct: 61 AVEMFLGFFNPMESLVTTNLLLSLYRAVTAPEARLYLARQAWEEANHVMAFEYVIKTLPL 120 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 D VF V + + + T V E + Sbjct: 121 DRERVFGLHVEHPAVAAKELF------------------QRQLAEQWLVTPDVESVEGLQ 162 Query: 193 KLYLCLM-SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 +L L+ LE I FY FA + AF +R L+ G I+ + +DE+LHL+ H++ Sbjct: 163 RLVRNLVGYFVILEGIFFYSGFALALAFRQRNLLRGLCTIVDWVLKDESLHLSFGIHLIT 222 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + + ++ ++ +L ++A + E+ + + + +IGL+ D+L +YV Y Sbjct: 223 TILEEHPE----IMSAAFGRQLRELILRAVELEEAYNRAVLPE-PLIGLDADVLNRYVRY 277 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 I + R++ +GL + F NP+ W+ + + V E Y VG Sbjct: 278 IADRRLEELGLPIAFG-EPNPLRWMVAQVDMPEI-VNFFEARNIHYEVG 324 >UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Bacillales RepID=C6IYS7_9BACL Length = 343 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 74/376 (19%), Positives = 150/376 (39%), Gaps = 38/376 (10%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M T T+ + G+ + ++ + KL + L W +E+ +++D Sbjct: 1 MQLQTIFNTEAPNKSTRIIGGECSGILNWNDIRMPHMYKLYKVLLLNHWIADEIPMAKDA 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E+ F N+ +LDS+Q + + LE E +H+ Sbjct: 61 QQFALLDPEEQRTFKINISLLAVLDSMQTMFVGD-VKRYFTDSSLEAISAIIGQQEVVHN 119 Query: 121 RSYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ +IV++ +F+ + + R + I++ Y + + Sbjct: 120 QSYSYVLSSIVSEQEQKEIFEYWKHDPVLLDRNKFIANIYQNFRDEPT------------ 167 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + + L++ LE I FY +FA + A + M G +++I I RD Sbjct: 168 ------------PQSFFEALVADLILEGIFFYSTFAFFYNLARDQKMMGTSQMISYIQRD 215 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H + L + +E Y +A + E +WA Y ++ + Sbjct: 216 ENQHCYFFAEVFKQLLIDYPE----LNTKENIDYAYRTIDRAVELETNWAHYTLKN--VP 269 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLV--SDNVQVAPQEVEVS 355 G++ + L Y++YI N R+ +GL+ + N +PWI + + + E + Sbjct: 270 GIDLNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSR 329 Query: 356 SYLVGQIDSEVDTDDL 371 +Y G++ + DDL Sbjct: 330 NY--GKVGDDNGFDDL 343 >UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit beta n=13 Tax=Bacillales RepID=RIR2_BACHD Length = 345 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 77/374 (20%), Positives = 154/374 (41%), Gaps = 35/374 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + T + G+ NV +D ++ L + L+ FW P E+++S D Sbjct: 4 LQKRKIYDTTASNASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDA 63 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E E+ F + LDS+Q ++ ++ L + +F E +H+ Sbjct: 64 KQFPTLTETEQEAFKKIIGLLAFLDSVQT-DYSMRAAEYLTDSSLAALMSVLSFQEVVHN 122 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ ++V +F+ ++ +++R E I Y++ ++ + Sbjct: 123 QSYSYVLSSLVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPT------------ 170 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 K ++ LE + FY FA + A + M + +I I RD Sbjct: 171 ------------PKTFLESIVYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRD 218 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E LH+ ++ L + EE K ++AA EKDW Y+ D + Sbjct: 219 EQLHVYLFTNIFKELLVEFPE----LNTEETKTFVKTTLMKAADLEKDWFRYIIGD-KIP 273 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSY 357 G+N + + Y+ +I N R +G++ P+ + NP+ WI + ++ + E + Y Sbjct: 274 GINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQY 333 Query: 358 LVGQIDSEVDTDDL 371 + ++ D+L Sbjct: 334 AK--VSADNGFDEL 345 >UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Proteobacteria RepID=B0TZS9_FRAP2 Length = 410 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 68/342 (19%), Positives = 133/342 (38%), Gaps = 37/342 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--ALPEHEKHIFISNLKYQTLLDS 86 Y Y L K W +E+D+S D D++ + + EK + L+ T D Sbjct: 100 YKPFSYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDV 159 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 G++ +PL E+ + ++A E IH R+Y + + P + + + Sbjct: 160 AVGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGL-PDSEYHAFLEYKA 218 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 + + + + + ++ L LCL E Sbjct: 219 MTDKIDFMMD-----------------------------ANPNTRRGLGLCLAKTVFNEG 249 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + SFA F M+G K++ RDE++H+ G + + + Sbjct: 250 VALFASFAMLLNFQRFGKMKGMGKVVEWSIRDESMHVEGNAALFRIYCQENP----YIVD 305 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + K+E Y + +A + E + D + G++ GL D + +Y+ +IT+ R+ +GL+ + Sbjct: 306 NQFKKEIYLMASKAVELEDKFIDLAYEIGTIEGLKADEVKEYIRHITDRRLNQLGLNEIY 365 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+ W+ W+++ E V+ Y V + D Sbjct: 366 NIDKNPLTWLE-WILNGADHTNFFENRVTEYEVAGLTGNWDE 406 >UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Halobacteriaceae RepID=B0R7R4_HALS3 Length = 331 Score = 258 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 133/341 (39%), Gaps = 28/341 (8%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY--QALPEHEKHIFISNLKYQTLLDSIQ 88 YD + ++ ++ W PEEV + D + L + E+ + NL + + +S+ Sbjct: 17 PIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAESLT 76 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + +A+ ++ PE ++ A+ E +H+ ++ + ++ DP ++ I Sbjct: 77 ANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGFDPEHMYGMYDRIPSIA 136 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 ++ E + + + + + +E I Sbjct: 137 EKDEFVVGLTRAVDDQAFTIDTDDDLRDFLRDLVG----------------FYVIMEGIF 180 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 FY FA A R M G + I RDE+LHL ++N +R D A+ Sbjct: 181 FYAGFAMMLALKRRGKMVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVWTAD---- 236 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQT 328 + E L A E+ +A D ++G++ + YVEY+ + R Q + +D + T Sbjct: 237 FEAEVNSLMRDAVDLEQLYARDACPD-DLLGMSSEQFADYVEYVADRRFQQLRMDPVYGT 295 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 NP PW+ + + + E VS Y G +D D Sbjct: 296 D-NPFPWMTEQVDLNT-ETNFFERNVSEYQQG---GSLDWD 331 >UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Bacteria RepID=B0U5P0_XYLFM Length = 349 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 78/370 (21%), Positives = 146/370 (39%), Gaps = 37/370 (10%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 + +N + G+ + ++ Y F + ++ + FW P+EVD+ D+ Y Sbjct: 13 ILEPRNPNRSTGIINGKTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDKRQYGE 72 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L EK+ + + + LDS Q R + I+ P E IH+ SY++ Sbjct: 73 LSAREKNAYDAIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHNESYSY 131 Query: 126 IIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 ++ +I + + + VF+ T+ I KR I YD+ + + Sbjct: 132 VLASITDLANQNRVFEIARTHPTILKRNAPIMQAYDDFMREKT----------------- 174 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 + L L+ + LE I FY FA + + M G KII I RDE H Sbjct: 175 -------AETLLYSLIQSSILEGINFYSGFAYFYNLVRQNRMTGTGKIISFINRDELAHT 227 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 ++ + + + + + F A + E W + + G++ + Sbjct: 228 KFISEVIRAIVGENPELQT----DALTDYVHQAFAHAIELETQWTGEVLN--GIDGIDVE 281 Query: 304 ILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVS-DNVQVAPQEVEVSSYLVGQ 361 + +YV+Y N +G++ + +T N +PWI + + + E+ +SY Sbjct: 282 EMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKKTN 341 Query: 362 IDSEVDTDDL 371 +D+ DDL Sbjct: 342 VDN--CFDDL 349 >UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=A4XD08_SALTO Length = 350 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 143/358 (39%), Gaps = 29/358 (8%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E P +Y F ++ + W EEVD+ D D L E+H+ Sbjct: 17 ERHLLLDPGMDLTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAKLSSAERHLVS 76 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 + + D+I + + L ++ PE ++ F E +H + Y +++ V + Sbjct: 77 RLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEK 136 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 F + I ++AE + D + E+ + + + Sbjct: 137 ERFAAFAAVENIPSIARKAEFCFRWIDSIFELRE-----------------LRTQADRRA 179 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L + +E + FY +FA + R L+ G A + RDE++H+ +++ Sbjct: 180 FLLNLICFAACIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDT 239 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 +R+ D + +++ ++ +A E +A+ L G + GL+ + +Y++++ Sbjct: 240 VRAEEPD----LFDADLERQVKEMVAEAVDCEVQFAEDLLEQG-VSGLSLADMREYLQHV 294 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 + R+ +G+ + + +NP ++ V + E VS+Y +G + V DD Sbjct: 295 ADRRLVTLGIAPMYGS-ANPFAFMELQDVQEL--SNFFERRVSAYQMG-VSGSVTFDD 348 >UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 Length = 419 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 135/348 (38%), Gaps = 50/348 (14%) Query: 21 GQPVNVARYD---QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 ++ + +Y +L +KQ + FW EE+D+S D D++ EKH Sbjct: 101 EDFDRFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLV 160 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV- 136 L + LD I + + I IP++ +E +H SY+ +I+ D Sbjct: 161 LAFFASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQ 220 Query: 137 --VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 V I T I+K+A + + L Sbjct: 221 RHVMRSIQTMPIIEKKALWAEKWMN-----------------------------PETASL 251 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 L+ LE ++F SF + +R+ +G + LIARDE LH T + + L+ Sbjct: 252 AERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIARDEGLHATASVLIYKHLK 311 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 + ++ +++F A E ++ ++IG+++ + +Y++++ + Sbjct: 312 NRLP-----------RERVHEIFKHAVSVECEFISSALP-VALIGISEKSMTEYIKFVAD 359 Query: 315 IRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + +G D + +NP W++ ++S + E V+ Y + Sbjct: 360 YWLNQLGYDKVYNC-ANPFEWMD--MISLQGKTNFFENRVAEYSKPGV 404 >UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_SYNY3 Length = 355 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 169/373 (45%), Gaps = 44/373 (11%) Query: 5 TFSQTKNDQL-KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ T ND + ++FG N+ + + +Y+ L ++ FW P+ +D+++D DY Sbjct: 17 IFNPTGNDSVENRTIWFGNTTNLMQLNDVRYNWAVGLYQQMRENFWIPQRLDITQDVTDY 76 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 L E++ F L Y T LDS+Q + L ++ PE+ + E +H++SY Sbjct: 77 WNLTNEERYAFDGILSYLTFLDSVQTCNI-PHLKSSVTAPEISLCMAEQISQEGMHNQSY 135 Query: 124 THIIRNIVNDP--SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 ++I I+ V++ T+ +++R E I+ Y + ++ + Sbjct: 136 QYMIETIIPTEKRDKVYEFWRTDRVLKERCEYIAMLYQKYVDHPT--------------- 180 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 ++ ++ LM+ LE + FY F + A R LM G+A I ++I RDE Sbjct: 181 ---------QENYFIALMADYLLEGLYFYNGFIYFYNLASRMLMPGSADIFKMINRDELS 231 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H+ Q ++ PE ++ + Y++F +A + E W +++ + +++G+ Sbjct: 232 HVRLYQKLI---------PEAMQVFTHSTDQIYEMFDKAVEFECRWTNHIVGN-NILGIT 281 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTR---SNPIPWINTWLVSDN---VQVAPQEVEVS 355 + QY +Y+ N R++A+GLD + +P + + + + E V+ Sbjct: 282 ESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEAHTKANFFEATVT 341 Query: 356 SYLVGQIDSEVDT 368 SY++ S D Sbjct: 342 SYVMSSGVSGWDE 354 >UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=B4D9U7_9BACT Length = 390 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 133/359 (37%), Gaps = 27/359 (7%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHI 73 + + G KY ++ ++ + W P+ +D++RD + L E+ I Sbjct: 55 KRVINGLRSAELNVLPLKYHEAYRIYKQMKANHWEPDVIDMTRDSQQWNTGALSPKERWI 114 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 + Y + + I G S + ++ EL+ E+IH S HII ++ D Sbjct: 115 IEMGVGYFSAAEGIVGDSVLHVIEDNLTAAELKHASLRHIAEESIHMDSLLHIIGSLNID 174 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 V +Q++ I+ + EL + ++ K+K Sbjct: 175 LDEVTAKFSDIPSVQRKNAFITRHMPEL------------------KMGIDLTQTANKQK 216 Query: 194 LYLCLMSVN-ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + + +E +FY FA + + M G ++ + RDE+ H+ +++L Sbjct: 217 FAKAIFGITQVMEGTQFYALFAMILSLHRQNKMTGIGQMFQYTLRDESNHIELGRYILTQ 276 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 L + D E + E + + + EK++ + + G+ + YVEY Sbjct: 277 LIAENPD----IWTPEFRAELVEFMREGVELEKEFVRDCLPEDGV-GMTQADFLTYVEYN 331 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + R+ + L ++NP W++ + + E V+ Y DDL Sbjct: 332 ADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEK-NFFETRVTEYQTSGSLKNTAEDDL 389 >UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 Tax=root RepID=Q7Y4S0_BPR69 Length = 390 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 178/387 (45%), Positives = 242/387 (62%), Gaps = 15/387 (3%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 T F+ + D L EPMFFG + +ARYD Q++ +FE+LI + LSFFWRPEEV++ D Sbjct: 2 STVFNTQQVDVLNEPMFFGSGLGLARYDIQRHKVFEELI-EILSFFWRPEEVNLMLDSAQ 60 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 + LP+ ++ I +NLKYQ+LLDSIQGR+P+ L+ LIS P L+TWV TW FSETIHSRS Sbjct: 61 FNKLPQFQQDICTNNLKYQSLLDSIQGRAPSAVLMALISDPSLDTWVATWTFSETIHSRS 120 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 YTHI+RN+ DPS VFD+IV +E I KRAE I YYD+++ T W E G Sbjct: 121 YTHIMRNLYTDPSKVFDEIVLDEAIMKRAESIGKYYDDVLVKTRNWENAKEVYECSIGSC 180 Query: 183 VTVS-----------LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER-ELMEGNAK 230 R+L K LYLCL +NALEAIRFYVSFAC+F F + E+MEGNAK Sbjct: 181 QQNDIEMYEEIMFNAKRDLMKSLYLCLHVINALEAIRFYVSFACTFNFHKNMEIMEGNAK 240 Query: 231 IIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADY 290 I++ IARDE LHL + ++ + ++ + + K+WA + Sbjct: 241 IMKFIARDEQLHLRVLSTLSVNFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKYKEWAAH 300 Query: 291 LFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ--TRSNPIPWINTWLVSDNVQVA 348 LF+DG+ G+N +C +V+Y+T RM+ GL P +P PWI +L SD VQ A Sbjct: 301 LFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLNSDLVQAA 360 Query: 349 PQEVEVSSYLVGQIDSEVDTDDLSNFQ 375 PQEVE+SSYLV QID++VD + +++++ Sbjct: 361 PQEVEISSYLVAQIDNDVDQNVINSYK 387 >UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=Proteobacteria RepID=Q2S729_HAHCH Length = 405 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 70/348 (20%), Positives = 138/348 (39%), Gaps = 27/348 (7%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHI 73 + + G ++ + KY + W P ++++S+D DY L EKH+ Sbjct: 80 DKRVVNG-MTDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKHV 138 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 + + L Y T D + R+ +A++ +S PEL+ + + E++H+ +Y H I I D Sbjct: 139 YENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIETIGLD 198 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 S +++ I ++ + + L+ + +L+ Sbjct: 199 QSEIYNRYRVTPAIYRKIKMGNERISALLRPDINLR----------------NRDDLETF 242 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLL 253 + + E FY F+ FA R LM+G + ++ I RDE +H ++ + Sbjct: 243 VMAYIFFAGIFEGCWFYNGFSPIFALQRRGLMKGTGEQLQYIMRDEVMHCAFGIRVVKQI 302 Query: 254 RSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYIT 313 E + L+ +A E +A +L ++ ++G + + +I Sbjct: 303 IKE-------EGVTLDPKAIKTLWEEAEAAETGYAHFLLKE-PILGYTAEDHIEQFRFIA 354 Query: 314 NIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 N R + + LD PF N +PW++ + E V+ Y G Sbjct: 355 NRRAKQLKLDEPFPGAGNALPWLDEQASMRKEK-NFFETRVTEYQTGA 401 >UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain n=68 Tax=Alphaproteobacteria RepID=B3CU68_ORITI Length = 359 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 116/341 (34%), Gaps = 35/341 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSI 87 Y Y K Q W PEEV ++ D D++ L EKH+ ++ T D Sbjct: 25 YKPFSYPWAYKAWHTQQKIHWLPEEVPLADDIKDWKYNLTPGEKHLLTQIFRFFTQADIE 84 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + E++ + ++ ETIH +Y+H++ + P + + + + Sbjct: 85 VNNCYMKHYARVFQPTEVQMMLSAFSNMETIHIAAYSHLLDT-IGMPETEYQAFMKYKAM 143 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + + + + ++ ++ + E + Sbjct: 144 KDKYDYMQRF----------------------------NVDNKEEIATTLAVFGAFTEGV 175 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + SFA F M+G +II RDE LH + + E Sbjct: 176 QLFASFAILLNFPRYNKMKGMGQIITWSVRDETLHTNSIITLFKTFIQEYPEV----WTE 231 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 + K Y+ E + D F G + GL + +Y+ YI + R+ +GL + Sbjct: 232 QLKSRIYEACCTIIHFEDAFIDLAFEVGGVEGLEARDVKKYIRYIADRRLLQLGLKENYL 291 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+ W++ L E V+ Y D Sbjct: 292 IEQNPLTWLDQILN-GVEHTNFFENRVTEYTRSATTGSWDE 331 >UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain n=8 Tax=Fungi/Metazoa group RepID=B7XP84_ENTBH Length = 336 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 113/325 (34%), Gaps = 48/325 (14%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHI 73 EP+ + Q Y + + S FW EEVD++ D + L +E+ Sbjct: 24 GYEPLLDEAKKRYVIFPIQ-YPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFF 82 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 L + D I + + I E + + E IHS Y+ +I ++ D Sbjct: 83 IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142 Query: 134 PSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 +F+ I I+K+A + Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIAS------------------------------ 172 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 ++ +E I F SFA F +R LM G LI+RDE LH + Sbjct: 173 DTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLH 232 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + + D+ +A E+++ S+IG+N ++CQY+E Sbjct: 233 KYINNKCT-------------VIEDIVREAVAIEQEFLSESLP-VSLIGMNCKLMCQYIE 278 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPW 335 ++ + + A+G + ++ I W Sbjct: 279 FVADRLLFALGERKIYTFLTHSISW 303 >UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain n=7 Tax=African swine fever virus RepID=RIR2_ASFB7 Length = 334 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 133/361 (36%), Gaps = 46/361 (12%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E + + Q + +K S W +EVD+ +D D++A+P+ ++ + Sbjct: 9 EELLIENSQRFTIFPIQ-HPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYK 67 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 L + + D I + + I + E+ + A E +HS +Y+ ++ ++ D Sbjct: 68 QILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEK 127 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +F I + I+K A+ + + D + Sbjct: 128 EQQRIFSGIEKHPIIKKMAQWVRQWMD-----------------------------PDRN 158 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L L+ A+E I F F E+ +M G I+RDE +H + +++ Sbjct: 159 TLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNEFISRDEGVHCSFACFLISN 218 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD--GSMIGLNKDILCQYVE 310 + ++ + + +A + ++ +Y F G + G +K++L QY+ Sbjct: 219 YVYNIPEEKI----------IHKILKEAVELVDEFINYAFDKARGRVPGFSKEMLFQYIR 268 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 Y T+ + ++ NP P + + +++ + E+ + Y D Sbjct: 269 YFTDNLCFMMQCKSIYKV-GNPFPQMTKFFLNEVEKTNFFELRPTQYQNCVKDDAFAFKL 327 Query: 371 L 371 Sbjct: 328 F 328 >UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase beta chain n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QU02_9CAUD Length = 365 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 102/372 (27%), Positives = 180/372 (48%), Gaps = 18/372 (4%) Query: 1 MAYTTFSQTKNDQL--KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSR 58 M+ T F+ + L P+F GQP+ + + Y L ++Q + W +EV++ Sbjct: 1 MSSTVFNHKNDAYLTASYPLFMGQPLAMYDSMNKIYPELFDLYKQQKAQDWSEDEVNLEN 60 Query: 59 DRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 RID+Q + E + I NL +Q DS R+ L P IS E V E + Sbjct: 61 SRIDFQTAAKSEIEVCIENLLWQWEADSRVSRNIITLLAPFISNNEFAAMVTKQTEIENL 120 Query: 119 HSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 H+ +Y+ I+R ++DP+ + ++ N+ + R+ I EL + + L Sbjct: 121 HALTYSEIVRQCISDPTEMIKRVMDNQAVLDRSSTIDDVMAELEILGAKKRL-------- 172 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + +++ L ++S+ ALE + F SFAC+FA A+R L G A++++ I D Sbjct: 173 ---GYELDDEHIRQTLIKFMVSILALEGLEFIASFACTFALAQRGLFMGVAQLVQKIMLD 229 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SM 297 E LH L++L DP + + CK + + + + E +WADY+F +G S+ Sbjct: 230 EILHSKMDFAALDILLK---DPVWFQSYQNCKGDVQRILDEVMENESNWADYIFSEGRSV 286 Query: 298 IGLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 +GLN +L ++V Y + LD + NP+P+++ W+ D+ Q A QE + S Sbjct: 287 VGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNIDSQQNANQEQDNSQ 346 Query: 357 YLVGQIDSEVDT 368 YL+ + ++ + Sbjct: 347 YLLNTMVNDDED 358 >UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Bacteria RepID=C6D5U5_PAESJ Length = 318 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 145/351 (41%), Gaps = 40/351 (11%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 + +++ D ++ + FW EE+ +S D++D+ + + E+ ++ + L TL Sbjct: 1 MKAVNWNRPDDDFTLTFWQQNVMQFWTDEEIPLSDDKMDWMEMSDTERTVYKNVLGGLTL 60 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDI 141 LD+IQG +L + + + + + E IH++SY+ I + + + +F + Sbjct: 61 LDTIQGGVGMPKILEHVDGLQRKAVLAFMSMMEQIHAKSYSSIFTTLASTEEIDAIFQWV 120 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 TNEQ+QK+A +SS+Y E K++LY + + Sbjct: 121 ETNEQLQKKATLVSSWYQ---------------------------GIETKQQLYKAMAAS 153 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F A + M + +II LI RDE++H + L + E Sbjct: 154 VFLESYLFYSGFFYPLYLAGQGKMTSSGEIIDLILRDESIHGLYVGVLAQELFNQFTPEE 213 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 + K+E + L + E + D L+ + ++ + YV Y N + +G Sbjct: 214 ----QAQLKEEVFALLNTLYENEVVYTDNLYSPIGL----QEDVKAYVRYNANKALMNLG 265 Query: 322 LDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + F NPI + + + Q + + Y+ ++ +D Sbjct: 266 FEPYFPEEPVNPIVF--NGISTHTKQHDFFSKKGNGYVRTVHIEQLRDEDF 314 >UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase small subunit 048L n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR2_IIV3 Length = 376 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 121/341 (35%), Gaps = 18/341 (5%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 + +Y + W +E+++ D D+ L E EK + L++ T D Sbjct: 53 FKPFEYPGCYDKWDTHEHAHWSFKELNMQDDVHDWHNRLSEAEKTFLVQILRFFTQGDVD 112 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 V L L PE+ + ++ E +H SY+H+I + N P V + + + + + Sbjct: 113 VA-VGYVQYLQLFQQPEVRMMLFSFGAREAMHIASYSHLISTL-NLPDVTYQEFLKYKAM 170 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + E + + + L++ + +E + Sbjct: 171 KDKHEFVFN-----------SRFKSTTVGRFFNYLLFGYDTHLEEIAVKIALFSAFIEGV 219 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + SF F LM+ +II+ DE H + + L Sbjct: 220 QLFSSFIMLLNFTRHGLMKKMGQIIQWSIADETHHTNSMMELFSTLVVENK---SHIRLG 276 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 + D + Q E + D F G M L D + Y+ YITN R+Q +G + Sbjct: 277 VLEARVRDTARKIVQLEDGFIDLAFSMGEMRQLTADDVKSYIRYITNRRLQTMGYLPLYS 336 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+PW+ L + + E + + Y + + Sbjct: 337 VVENPLPWVEDLLNAPS-HTNFFENKPTEYAKASLTGDWPW 376 >UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C3B1_9GAMM Length = 374 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 138/358 (38%), Gaps = 28/358 (7%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--L 66 + + G+ +V + KY + FW P E+ + D++ + L Sbjct: 35 KRPSSSDIKIIGGRGYDVRQPIPVKYTSVRERFLNARKNFWIPNEIPMGEDKLQWNTGLL 94 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 E E +F SN+ Y T D++ + + A+L I+ E+ + E+ H SY I Sbjct: 95 TEAEMWLFKSNISYLTASDNLVPDNLDNAILKHITANEMRQYFRHQIMEESNHIESYLFI 154 Query: 127 IRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 + + D +F+ + ++ T+ V Sbjct: 155 LESFGLDEKGQGQIFNLYQEVPALTEKLNW-----------------NLTFTNNVVNSEA 197 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 E + L L+S E + F + F+ FA A + + A+ I RDE LH Sbjct: 198 PRGTLEANRALLEDLISYYIFEYLFFPLGFSQIFALARKGKLRNTAQQYSYIWRDENLHS 257 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 + ++ + ++ E+ + ++ + +A + E D+A +G ++GL Sbjct: 258 SNGLWLIKQIIQ--ENHELWDST--MQERSRAIVSEAVKLETDYAHASMPEGGIVGLPVK 313 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ ++ + + +G+ F+ R +P+PWI+ + ++ V E V Y G Sbjct: 314 TYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEYELNHE--VNFFEGRVREYQTGS 369 >UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=cellular organisms RepID=Q2RUE9_RHORT Length = 358 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 125/355 (35%), Gaps = 48/355 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDS 86 Y+ ++Y + +KQ W EEV + D D+ + + + E+++ ++ T D Sbjct: 26 YNVERYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWASDRVSDQERNLLTQIFRFFTQSDV 85 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 + +P+ E++ + + ETIH +Y ++ + P F Sbjct: 86 EVSDNYLKRYMPIFQPLEIQMMMAAFTNMETIHIDAYALLLTTL-GMPRTEFSAFRDYAA 144 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 ++ +A+ + ++ + S M E Sbjct: 145 MRDKADYMHTFGVGTMADVSRTL----------------------------AMFGAFTEG 176 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + SFA F M+G +I+ RDE+LH G + + + E + Sbjct: 177 MALFASFAMLLNFPRHNKMKGMGQIVTWSVRDESLHCQGIIRLFHEW-----NRETGALT 231 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + + D+ E+ + D F G++ G+ + + YV Y+ + R+ + L + + Sbjct: 232 KPVRDDILDVATTMVGLEEKFVDLAFELGAIEGMRAEDIKSYVRYVADWRLTQLKLPILY 291 Query: 327 Q-----------TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 R +P+PW+ L E + Y D D Sbjct: 292 GHFRETEAGYEQLRPHPLPWLVEILN-GVEHANFFEQRSTEYSKAATQGAWDGPD 345 >UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subunit n=9 Tax=Bacteria RepID=B0RGP8_CLAMS Length = 331 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 140/346 (40%), Gaps = 25/346 (7%) Query: 17 PMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFIS 76 + Y L ++ ++ W P E+ + D D++ + + E+H Sbjct: 3 KILGTGIQEGLLLKPVNYQWAMDLYDQAVANTWFPNEIQLGEDIADFKKMTDEERHAITF 62 Query: 77 NLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 + Y + + ++ + P I+ PE ++ + E H S+ +++ D Sbjct: 63 LMSYFNPNELLVNKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETFPIDREA 122 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 ++ V + ++ E + + E +T+ ++ E KK Sbjct: 123 AYNSHVDIPSMARKEEFEVKFIKRMTE-----------------QTLDITTTEGKKDFVR 165 Query: 197 CLMSV-NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRS 255 L++ LE I FY F S +F +R L+ ++ I RDE+LHL +++ + Sbjct: 166 NLVAYNVILEGIWFYSGFMVSLSFRQRNLLRNFGSLMDWIVRDESLHLKFGINLILTVLE 225 Query: 256 GADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNI 315 D + EE E + + A + E+ + L +G ++GLN + + QYV+Y+ + Sbjct: 226 ENPDLQT----EEFAAEIKQMILDAVEMEEQYNRDLLPNG-ILGLNANYINQYVKYLADR 280 Query: 316 RMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 R++ +G + ++ SNP W+ T V E +SY Sbjct: 281 RLEELGFEAEYKV-SNPAKWMAT-ANDTLQLVNFFESTNTSYESNA 324 >UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=Alphabaculovirus RepID=A0EZ20_9ABAC Length = 341 Score = 241 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 123/340 (36%), Gaps = 22/340 (6%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQG 89 + ++ + + W+ EE D+SRD D+ L E+ L + D+I Sbjct: 13 PIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASADTIVN 72 Query: 90 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQ 146 + + + E + + E +HS Y+ ++ + + + + + Sbjct: 73 INLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAFDRIDC 132 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 I+K+A+ + + W + + KL +++ +E Sbjct: 133 IKKKAQWALKWTES------KWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFAIVEG 186 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 I F SFA F + LM G LI+RDE LH N + Sbjct: 187 IFFSGSFAAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYYNNYIPINE-------- 238 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + Q+ +F++A EK++ ++G+N +C+Y+E++ + + + F Sbjct: 239 KLSPQQILSMFIEAVDIEKEFFTTALP-CYLLGINATEMCKYIEFVADRLLVELRQPKHF 297 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 T NP ++ +S + E V Y +V Sbjct: 298 NT-PNPFNFMTN--ISLEGKTNFFERRVGEYKRFGAGQDV 334 >UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subunit n=7 Tax=Ranavirus RepID=Q8QYZ8_RTRV Length = 387 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 122/349 (34%), Gaps = 40/349 (11%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDS 86 + +Y E + K W E+++ D D+++ + EK L+ T LD Sbjct: 73 FKPFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEKAFVSCVLRLFTQLDV 132 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 G L + E+ + ++A E IH ++Y+ + + P + + Sbjct: 133 EVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTL-GMPDCEYQAFADYVE 191 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 + + + + L L+ E Sbjct: 192 MTDKLDFMREM-----------------------------DCSTLPGLARSLLRAVLNEG 222 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + +F F M+G K++ RDE +H+ G + L S +I Sbjct: 223 VSLFAAFVMLLTFQRSGKMKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDII 282 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRD-GSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 E K++ + A+ E+ + D F++ G + L + YV Y+ N+R +GL Sbjct: 283 ELFKED----AERVAELEEAFVDLAFQECGPVCELEPKQVKDYVLYVINLRAANMGLPKL 338 Query: 326 FQ--TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + + PIPW+ WL+ E V+ Y G + + L Sbjct: 339 IERAPEACPIPWV-KWLIDGADLTNFFENHVTEYETGGLTGSWSYEPLD 386 >UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD Length = 352 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 74/365 (20%), Positives = 149/365 (40%), Gaps = 36/365 (9%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 + + + G+ + ++ + +I+ + + + FWRP E+ + D + + Sbjct: 17 LLEPSHPNRGTKIVGGECSGLLNWND-EDEIWYDISQTLEANFWRPVEIKMKEDEKMWDS 75 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L E+ F+ LDS+Q ++ ++ + L A E H+ SY++ Sbjct: 76 LTPIEQDTFLRVGTALACLDSLQVKAILE-VIRFTTNSALANISAFIAQQEATHTTSYSY 134 Query: 126 IIRNIVNDP--SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 I ++V P + F++ + + + KR + + Y++ E S Sbjct: 135 ITSSLVRLPVQNQYFNETMKHPVLAKRNKLVLDVYEDFAENPSL---------------- 178 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 + L+ L+ LE I FY FA + A ++ M ++ +I I RDE H Sbjct: 179 --------QNLFRMLVQSINLEGIYFYSGFAFFYWLASQQKMMKSSTMISYIQRDEMQHA 230 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 ++ L + + +E Q D +A EK+WA + D + GL+ + Sbjct: 231 YFIGLLIRRLLTENPE----LNTQENAQYIVDSLKEAVATEKEWAGEILAD--IEGLDLE 284 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLV--SDNVQVAPQEVEVSSYLVGQ 361 Y+EY+ N R++ +G+D ++ R NP+PWI + ++ + E + Y Sbjct: 285 EFDHYIEYLANKRVRQLGMDNIYEERGNPMPWIQVFSDEMMEHTKTDQFENKSRDYSGAT 344 Query: 362 IDSEV 366 + Sbjct: 345 KKNNF 349 >UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate reductase, small subunit n=2 Tax=Siphoviridae RepID=Q6QGJ3_BPT5 Length = 381 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 117/377 (31%), Positives = 204/377 (54%), Gaps = 11/377 (2%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 TT D + +F G + +A Y + + E+L S FW E+ + D+ + Sbjct: 2 TTLLNLNWDHTNKDLFLGDSLGIADYVRVAHPELERLALLARSQFWTETEISLEADKKQW 61 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 LP + I + NL +QT DS R+P A++PL+S PELE ++ W++ E +HSR+Y Sbjct: 62 PNLPREIQEITLLNLAWQTQTDSFISRAPEAAIMPLVSRPELEGMLKQWSYFEDLHSRAY 121 Query: 124 THIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLG--EGTHTVNGK 181 ++IIRN++ DP+ D + N++ R +DEL ++ Y+ + G +T Sbjct: 122 SNIIRNVLTDPAEFIDSVTKNQEAFARIADSVELFDELYQLGQYFIAVRDHRGDNTYPET 181 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 RE + KL ++ LEA++FY SFAC+FA AE ++++G AK ++LIA+DEAL Sbjct: 182 EFPEVKRETQAKLLDAYFAIYGLEAMQFYASFACTFALAENDILQGIAKNLQLIAKDEAL 241 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H ++ ++ ++ D ++ +E + ++ + E +W ++F+ S+IGLN Sbjct: 242 HTQMSKAIIQIMFQQFDK----DLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLN 297 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVE-VSSY 357 ++L +Y+ ++ +G++ P NPIPWI WL + ++Q APQE++ ++Y Sbjct: 298 AELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDTTSLQPAPQEIQIGAAY 357 Query: 358 LVGQIDSEVDTDDLSNF 374 VGQ+ E TD L + Sbjct: 358 RVGQVT-ETSTDTLKDL 373 >UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subunit n=4 Tax=Myoviridae RepID=A2PYM8_9CAUD Length = 348 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 150/373 (40%), Gaps = 44/373 (11%) Query: 5 TFSQTKNDQ-LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ + +D K +F G P N+ KY L + + W P+ D++ D +Y Sbjct: 8 IFNPSGDDSPQKRRLFGGNPTNIINLKDVKYKWASHLFTEMRANIWIPQATDLTPDINNY 67 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 +P + + F L Y T LDS+Q R L+P+I+ PE+ + E +HS+SY Sbjct: 68 VTMPPNMRRAFDGMLSYLTFLDSLQTRVL-PLLMPVITAPEVSICMGEQLSQEQVHSQSY 126 Query: 124 THIIRNIVND--PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 +II ++ +++ + + KR E I + YD I + Sbjct: 127 AYIIETVIPTDKRDYIYELWREDPVLLKRCEYIQNLYDRYIHEMT--------------- 171 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + + ++S LE I F+ F +A A M A II+LI RDE Sbjct: 172 ---------MENYTISMVSDFLLEGIYFFPGFRLFYAIANERYMSATADIIKLIERDEQT 222 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL +++ + E DLF +AA+ E +W ++ + G+N Sbjct: 223 HLKLISNIIRTGLAEGTLMWD-------TDEIIDLFRKAAEYEIEWGLHI--GLGVNGIN 273 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRS---NPIPWINTWL----VSDNVQVAPQEVEV 354 + QY +Y+ NIR +A+GL F+ R NP + + + E V Sbjct: 274 ATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGEDSITRDNFFESGV 333 Query: 355 SSYLVGQIDSEVD 367 ++ D Sbjct: 334 IYRNPAKVVDGWD 346 >UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Propionibacterineae RepID=D1YE85_PROAC Length = 328 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 132/336 (39%), Gaps = 25/336 (7%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 Y L + ++ W P E+ + D D+ + E H + Y + Sbjct: 11 LLLKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNEL 70 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 + ++ + P ++ E ++ + E H ++ +++ D + + Sbjct: 71 LVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVPS 130 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV-NALE 205 + ++ ++ + E +T+ ++ E K+ L++ LE Sbjct: 131 MARKEAFEVAFIKRMTE-----------------QTLDITTVEGKQDFVRNLIAYNIILE 173 Query: 206 AIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 I FY F + +F +R L+ +I + RDE+LHL +++ + + Sbjct: 174 GIWFYSGFMVALSFRQRNLLRNFGSLIDWVVRDESLHLKFGMNLILTVLEENPE----IA 229 Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 +E E +D+ VQ + E+ + + G ++G+N D + YV+Y+ + R++ +G + Sbjct: 230 TDEFAAEIHDMIVQGVEMEEQYNRDMLPRG-ILGMNADYVNDYVKYLADRRLEELGFEPE 288 Query: 326 FQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ NP W+ T V E +SY V Sbjct: 289 YRVV-NPAKWMAT-ANDTLQVVNFFEATNTSYEVNA 322 >UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Bacteria RepID=C9XQ14_CLODC Length = 323 Score = 236 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 147/349 (42%), Gaps = 40/349 (11%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TL Sbjct: 9 HNAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTL 68 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND--PSVVFDDI 141 LD+ QG + +++ L + + + E IH++SY+ I ++++ +F+ I Sbjct: 69 LDTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWI 128 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 T +Q++A+ + + Y+ ++ LYL +++ Sbjct: 129 ETEPTLQRKADLVLAQYE---------------------------NTTNQEGLYLSMVTS 161 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F + + M + +II LI RDE+LH + + D + Sbjct: 162 VFLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLAQEIYDSFDKMD 221 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 + +++ Y + + E ++ + ++R+ + + + +++Y N ++ +G Sbjct: 222 ----KKMLEEKMYSILYSLMENEIEYTNVIYRESGL----EKEVVNFLKYNANRALENLG 273 Query: 322 LDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 + + + NPI + L ++ + + Y G + D D Sbjct: 274 FEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQKGVYEELEDED 320 >UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR2_MIMIV Length = 417 Score = 231 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 72/371 (19%), Positives = 139/371 (37%), Gaps = 52/371 (14%) Query: 10 KNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPE 68 + +KEP+ + + KY + Q+ +W EEVD+++D D+ L + Sbjct: 93 NDVIMKEPILSLKSEQYTVHP-IKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSD 151 Query: 69 HEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 +++ + L + D I + L+ ++ I E E E H Y+ ++ Sbjct: 152 DDRNFIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLT 211 Query: 129 NIVND---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 V D + + + I T I+K+A+ + + Sbjct: 212 TFVKDDALRNKLINSIKTMPSIKKKADWCNKWIKS------------------------- 246 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER--ELMEGNAKIIRLIARDEALHL 243 K L++ + +E + F SFA F R +M G + IARDE H+ Sbjct: 247 -----DKTYAHKLVAFSIVEGVFFSGSFASIFWLKTREMHVMPGLIISNQFIARDENKHV 301 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 M +LL + + + +I +E + + + ++G+N + Sbjct: 302 ELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFINDSL------------PCKLLGMNSE 349 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 ++ QY++Y+ + + +G F NP ++ V V+ E +Y ID Sbjct: 350 LMSQYIKYVADRLLVDLGYRKKFNVD-NPFEYMKKIDVF--VKANFFEKRNDAYSNANID 406 Query: 364 SEVDTDDLSNF 374 +E L NF Sbjct: 407 NEKKIVFLENF 417 >UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E3 Length = 309 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 69/333 (20%), Positives = 139/333 (41%), Gaps = 34/333 (10%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGR 90 K+ + ++++ + W P V+++ D Y L ++ +F L + + LD IQ Sbjct: 5 PMKHTWAKGILDRMENNTWFPHVVNMADDVASYNRLNAADRFMFDKALAFLSNLDGIQFN 64 Query: 91 SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKR 150 + N + ++ PE+ + A+ E +H +SY II + DP V+ + + ++ Sbjct: 65 NINQNIAKHVTSPEVSMCLSRQAWEEALHVKSYATIIETVSLDPMSVYMTFERDGLLAQK 124 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + I ++ + + + L +S LE + F+ Sbjct: 125 NQFILK------------------------QSRLLGEKFSAEGFALSCVSNVLLEGVYFF 160 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARD-EALHLTGTQHMLNLLRSGADDPEMAEIAEEC 269 F + A++ M G+A +IR I RD E HL HML+ LR D + Sbjct: 161 SGFLSFYLLADKGEMLGSADMIRYIQRDEEGTHLDLFAHMLDTLRHENKDV----FTQSF 216 Query: 270 KQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL-PFQT 328 + ++F+ +++ E W Y+ + + N + Y++++ N+R + + P+ Sbjct: 217 WNKALEVFLTSSEMEISWGKYITKGVT----NPKAIEDYIKHLANLRAEQIQAPFVPYPG 272 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 NP PW+ + + + E V+ Y VG Sbjct: 273 VKNPFPWVEQFSKPNTSEKNFFETRVTDYKVGG 305 >UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain 2 n=7 Tax=Saccharomycetaceae RepID=RIR4_YEAST Length = 345 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 128/372 (34%), Gaps = 54/372 (14%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 K + E + + KY +K + FW EE+++++D D+Q L Sbjct: 17 DMKEAEKDEILLMENSRRFVMFP-IKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLT 75 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + +K + L D++ + + PE +++ E I+S Y+ ++ Sbjct: 76 DDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMV 135 Query: 128 RNIVNDPSVV--FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 DP + F +I +++ +A I + Sbjct: 136 DAFFKDPKNIPLFKEIANLPEVKHKAAFIERWI--------------------------- 168 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 L++ A E I ++A F ++++M G A R I RD + Sbjct: 169 --SNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDF 226 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 + + LR+ + + +A + EK++ G++ + Sbjct: 227 SCLLFAHLRTKPNPK-----------IIEKIITEAVEIEKEYYSNSLP-VEKFGMDLKSI 274 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ---- 361 Y+E++ + +Q G + + NP ++ V+ + E +VS Y Sbjct: 275 HTYIEFVADGLLQGFGNEKYYNAV-NPFEFME--DVATAGKTTFFEKKVSDYQKASDMSK 331 Query: 362 ---IDSEVDTDD 370 E++ DD Sbjct: 332 SATPSKEINFDD 343 >UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase small subunit 376L n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR2_IIV6 Length = 360 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 122/361 (33%), Gaps = 37/361 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 Y Y F +K W P EV + D D++ L ++++ + ++ T D Sbjct: 10 YKPFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVD 69 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + LP +PE+ + +A E +H +Y++++ + P + + + E++ Sbjct: 70 VASAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLETL-GMPEATYKEFLMYEEM 128 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + + I + D H + ++ + + + E + Sbjct: 129 KDKQDYIKKFSDS--------------RHILGKGEENLTTEDKEHIAAGIALFSGFTEGM 174 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + +FA F M+G +I+ DE H G + + + Sbjct: 175 QLFSTFAMLLIFPLNGFMKGMGQIVTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPS 234 Query: 268 ECKQECYDLFVQAAQQEKDWADYLF-----------------RDGSMIGLNKDILCQYVE 310 ++ Y + + E+ + D +F + GL L Y++ Sbjct: 235 VLQETVYKIAKEMVGLEEAFIDLVFKKYKDEPINDDNDLETKDNKDFFGLTPQRLKAYIK 294 Query: 311 YITNIRMQAVGLDLPFQTRS---NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 YI + R+ +G F NP+P + +++ E + Y Sbjct: 295 YIADRRLNLMGYKSIFNLEPYPTNPLPELE-IMINAPTHTNFFENRSTDYANVSTKGTWS 353 Query: 368 T 368 Sbjct: 354 E 354 >UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit beta n=111 Tax=root RepID=RIR2_BACSU Length = 329 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 144/349 (41%), Gaps = 39/349 (11%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 + A + + + D + + + FW PEE+ ++ D + ++ L ++E+ ++ L TLL Sbjct: 6 DAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLL 65 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSET-IHSRSYTHIIRNIVNDP--SVVFDDI 141 D+ QG + + + + + + A E +H++SY++I + + VF+ + Sbjct: 66 DTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWV 125 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 N+ +QK+A+ I Y + ++ + L+ +++ Sbjct: 126 KQNKYLQKKAQMIVGLYKAI-------------------------QKDDEISLFKAMVAS 160 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F F + + + +II LI RDEA+H + + + + Sbjct: 161 VYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIY----NKQ 216 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 E E ++ DL Q + E ++ + L+ + + +++ Y N + +G Sbjct: 217 TEEKKAELREFAIDLLNQLYENELEYTEDLYDQVGL----SHDVKKFIRYNANKALMNLG 272 Query: 322 LDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 D F+ NPI + L + ++ + Y ++ D D Sbjct: 273 FDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKKATVEPLKDDD 319 >UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diphosphate reductase small chain n=2 Tax=Hydra magnipapillata RepID=UPI00019243CE Length = 363 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 69/381 (18%), Positives = 139/381 (36%), Gaps = 55/381 (14%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + Y + K D +E + V + K+ + L +KQ +W EE+D S DR Sbjct: 25 LEYDANDEKKKDSEEEILNKDLSRLVVKPINSKHKVIWDLYKKQKDAYWTAEEIDFSNDR 84 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 D+ + ++ +H L + DSI + L I++ E E E HS Sbjct: 85 HDFLKVDKNIQHFIKRILAFFAGADSIVNINIKKKLSK-ITVKEAEIAYGFQQMMEDTHS 143 Query: 121 RSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 Y ++ I+ DP + + T I++ + + + Sbjct: 144 EVYADMLIKIITDPVERDELINAFKTVASIKRMIQWAQRWINS----------------- 186 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE---RELMEGNAKIIRL 234 K+++ ++ E + F +FA + + ++M+G + L Sbjct: 187 -------------KRRIGYSIVVFCIFEGLMFSGAFAGIYWLKKILGEDIMKGLIQSNNL 233 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 IA+DE +H + + E+ E+ +E + C A Sbjct: 234 IAKDEGMHTIFGCVIYTFIIYRLSFEEICELMKEAVEICKSFTKDAIC------------ 281 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR-SNPIPWINTWLVSDNVQVAPQEVE 353 MIG+N +++ Y+EY+ + M +G + F T+ + +++T + + E Sbjct: 282 VDMIGMNVELMYNYIEYVADRLMVYLGYEKIFMTKIPDQFQFMDTIGFLN--KDNFFERR 339 Query: 354 VSSYLVGQID---SEVDTDDL 371 + Y D ++ + L Sbjct: 340 ATEYQKAYNDRNRADWNFKLL 360 >UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chain n=4 Tax=unclassified Myoviridae RepID=C5H7Q1_9CAUD Length = 357 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 82/362 (22%), Positives = 163/362 (45%), Gaps = 10/362 (2%) Query: 13 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKH 72 + P+F G + Y +L ++Q + W +E + R+D++++P Sbjct: 2 INQHPIFLGGERKTFDSLNKHYPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSG 61 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 + + LK+Q D+ +S A P IS T + + E +H+ +Y+ I+R + Sbjct: 62 VMLEILKWQWEADTQVAKSLAFAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIK 121 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +P + D+I N +Q R + ++ +EL++ + L + K Sbjct: 122 NPETILDEINQNVAVQDRLKTVNRVLEELLDEGINYRLSYVRDSL-----LDKDPLHFHK 176 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + L +V ALE I F SFAC+FA ++ +G A+ ++ I DE LH + + Sbjct: 177 VILKGLFAVTALEGISFMASFACTFALDAQDKFQGIAQAVQKIMLDEILHTK---IDIEV 233 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLNKDILCQYVEY 311 L+ D E + ++ E + + + E+ W+ Y+F +G +++GLN +L ++V Y Sbjct: 234 LKETLRDDEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAVVGLNTKLLHEWVYY 293 Query: 312 ITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 G+ F + P+ ++ + D Q A QE + +YL+ + ++++ Sbjct: 294 NAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGAYLLNTVVDDLNSGF 353 Query: 371 LS 372 L Sbjct: 354 LE 355 >UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta subunit n=2 Tax=Granulicatella RepID=C8NFG6_9LACT Length = 346 Score = 223 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 71/348 (20%), Positives = 129/348 (37%), Gaps = 42/348 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++Q + I + EK FW + VS D D++ L EK + TLL Sbjct: 33 KAIDWNQVEDMIDKLTWEKLTEQFWLDTRIPVSNDLDDWRTLSPAEKDVVGKVFGGLTLL 92 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIV 142 D++Q + + E F E++H++SY+ I + + +F+ Sbjct: 93 DTLQSEEGASLMKDYVRTQHEEAVWNNIQFMESVHAKSYSTIFSTLHTKAEIEDIFEWTN 152 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 NE +Q +A+ I+ Y K ++ Sbjct: 153 NNEYLQFKAKKINEIYQS-------------------------------KDALKMKVAST 181 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 LE FY F + + A+II+LI RDE++H T T + + + E Sbjct: 182 MLETFLFYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYTGYKFQQGYNELSEQE- 240 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 EE K Y+L ++ Q E + ++ +G + + ++ Y N +Q +G Sbjct: 241 ---QEEMKMWVYNLCLELYQNEVKYTQSIYDQ---VGWT-EKVKVFIRYNANKALQNLGF 293 Query: 323 DLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 D F T + P + + + + YL+G +++ D D Sbjct: 294 DPLFPDTAEDVDPIVMNGISTGTSNHDFFSQVGNGYLLGSVEAMDDED 341 >UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subunit n=4 Tax=Aquificales RepID=C0QUH3_PERMH Length = 329 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 74/348 (21%), Positives = 151/348 (43%), Gaps = 24/348 (6%) Query: 14 LKEPMFFGQPV---NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 +K+ F G+ N+ + +Y +F+++ KQ W PEE+++ +D +DY++L E Sbjct: 1 MKKLQFIGKTSVKDNIRLTENPRYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKSLTPTE 60 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 K +F +++ Y + + P+++ P + T F E IHS + I+ Sbjct: 61 KDLFDTSVGYFASSELLVQNVLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTF 120 Query: 131 VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 D +++ + ++ + ++ E I D GK +L Sbjct: 121 EMDRKRIYNITLEDKLLMEKQELIIRAVD----------------RITYGKADPDTLEGK 164 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 K+ L L++ E + FY +FA FA + M+ + LI DE+LHL + Sbjct: 165 KQILTAILLNNIIQEGMFFYSAFAHFFAMKDTGKMKNVVSGVELILIDESLHLQNGIEAI 224 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + ++PE+ + + + + + A + E ++ F ++ G++ L +Y++ Sbjct: 225 LTIVE--ENPEIVDDEK-FVENIKETIIDAVELELNYLKTKFGGTTIFGVSYKELEKYMK 281 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 YI + R++ +G D F+ NP+ ++ V EV + Y Sbjct: 282 YIADRRLEELGFDPQFKIDQNPLKFLQKEDV--KKLTNFFEVSSTEYT 327 >UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit beta n=504 Tax=root RepID=RIR2_MYCLE Length = 325 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 134/355 (37%), Gaps = 47/355 (13%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 V+ ++ + D ++ ++ FW PE+V VS D + L EK + + Sbjct: 10 DRVSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTASEKQLTMRVFTGL 69 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN--DPSVVFD 139 TLLD+IQG V+L+P P E AF E++H++SY+ I + + + F Sbjct: 70 TLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTAEIDEAFR 129 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 N +Q++A+ + YY + + Sbjct: 130 WSEENNNLQRKAKIVMEYYRGDEPLKRK-------------------------------V 158 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE+ FY F ++ R + A +IRLI RDEA+H + DD Sbjct: 159 ASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLVLVDD 218 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 E K+ Y+L + E ++ L+ + + + +++ Y N + Sbjct: 219 AR----RAELKEYTYELLFELYDNEVEYTQDLYDRVGLT----EDVKKFLRYNANKALMN 270 Query: 320 VGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL--VGQIDSEVDTD 369 +G + F T NP ++ + + SSY+ + + D D Sbjct: 271 LGYEALFPRDETDVNP-AILSALSPNADENHDFFSGSGSSYVIGKAVVTEDEDWD 324 >UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib beta subunit n=23 Tax=root RepID=A5VIB8_LACRD Length = 339 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 128/353 (36%), Gaps = 44/353 (12%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 +++ I + EK FW + V+ D D++ L + + Sbjct: 10 NQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRELDDDHQWTVGHVFGGL 69 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFD 139 TLLD++Q + AL + P + F E++H++SY+ I + + +F+ Sbjct: 70 TLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIKEIFE 129 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 T E +Q +A I++ Y + + + Sbjct: 130 WSDTEEYLQNKAVKIANMYLDPSQDPLKKK-----------------------------V 160 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE FY F + + A+II+LI RDE++H T + + + Sbjct: 161 ANVFLETFLFYSGFYTPLYYLGHNKLNNVAEIIKLILRDESVHGTYIGYKFQVGLRDRTE 220 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + ++ K Y+ + E+ + L+ +G D + ++ Y N + Sbjct: 221 KQQQDM----KDWMYNFLYELYDNEEKYTHLLYDQ---VGWT-DDVLTFIRYNANKALMN 272 Query: 320 VGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 +G D F + NP+ + + + + Y +G +++ D+D Sbjct: 273 LGQDPLFPDTASDVNPV--VMNGISTSTSNHDFFSQVGNGYRMGAVEAMNDSD 323 >UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystivirus RepID=Q678G9_9VIRU Length = 374 Score = 221 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 131/355 (36%), Gaps = 42/355 (11%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--ALPEHEK 71 LK +F Y Y +L + W +E+ ++ D D++ L + EK Sbjct: 60 LKRRLFEYNAS----YKPFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEK 115 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 L+ T LD G+ + +P+ E+ + ++A E H ++Y + + Sbjct: 116 KFITQILRLFTQLDVSVGQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDTLG 175 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 P + + +Q+ + + +S + I Sbjct: 176 L-PESDYSAFLKYKQMTDKTDFMSDMRTDTIG---------------------------- 206 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 + L+ E + + +F F +M+G K++ RDE +H+ G + Sbjct: 207 -NVAFSLVKAVYNEGVSLFAAFVMLLNFQRFGVMKGMGKVVEWSIRDENVHVEGLCKLFK 265 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + S + ++ + L + + E + D +F + + L + + YV+Y Sbjct: 266 TIVSEYP----FILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKNLKRVDVINYVKY 321 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 I R +GL + NPI W+ +WL+S E V+ Y VG ++ + Sbjct: 322 ILQRRTVQLGLSNKTDLQ-NPILWV-SWLISGRDVTNFFENRVTEYDVGGLEGDW 374 >UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=UPI0001976997 Length = 347 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 78/372 (20%), Positives = 162/372 (43%), Gaps = 39/372 (10%) Query: 5 TFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F++ ++ + F + +D ++ +LI++ FW P+EV +S+D++ + Sbjct: 10 VFNENLPNKGER--MFDDVSGILFWDDIINQVYYELIKEMREVFWIPDEVSMSKDKVQWA 67 Query: 65 A-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + E E+ +F++ + +LDSI + I ++ + A ETIH+ SY Sbjct: 68 TEMNEMEQELFLNAIGILAVLDSIAT-YFDNVAAYYIRDSAIKALMAFVAAMETIHNESY 126 Query: 124 THIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 T+I+ ++ + VF+ NE + +R + + +DE I+ + Sbjct: 127 TYILSSVSSKAVSLDVFERPKKNEFMIRRNKLMMDLFDEFIQNPT--------------- 171 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + L++++ LE + F F + F M G +I+ I RDE Sbjct: 172 ---------PETFAKGLVAMSGLEGLCFVNGFTPFYHFNRNGKMFGTGTVIQYIQRDEMK 222 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H ++ + + + EE + YD F + Q E+++ + L+++ ++ Sbjct: 223 HSYFQTILVRDILTQYPE----LNTEEFSEFVYDFFTELVQLEREFCEDLYKNTP--DID 276 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTW--LVSDNVQVAPQEVEVSSYLV 359 + + +Y+ Y N+ + +GLD F + NP+PWI + +N + E + +Y Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336 Query: 360 GQIDSEVDTDDL 371 + + D DDL Sbjct: 337 AN-EQKNDWDDL 347 >UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ8_9CAUD Length = 346 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 125/359 (34%), Gaps = 47/359 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP-EHEKHIFISNLKYQTLLDSI 87 Y Y F L+ K W +E ++ D D++ + E+ L T D + Sbjct: 17 YKPFLYQEFYDLMTKHEDAHWVKQEAELGDDVNDWRNRSSDDERSFIKEILTVFTQGDVV 76 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + +P E+ W+ A E IH +Y P +F +++ Sbjct: 77 VADNYKSIFIPAFKNNEVSNWLVGVAAREVIHQDAYAMANETFGL-PDSMFGRFREYQEM 135 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 ++R + +++ YD + + L + L+ E + Sbjct: 136 RERNDLMATQYD----------------------------PSMVEGLAMGLVHTTFNEGV 167 Query: 208 RFYVSFACSFAFAE---------RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD 258 +FA F R +G KI + RDE +H+ G+ + + Sbjct: 168 CLMGAFANLLQFNRFDVPGFNGYRGRYKGLTKINKWSLRDEGIHVEGSSLLYRKVMGEHP 227 Query: 259 DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQ 318 + +E K++ YDL E + D F+ + + KD YV Y+ N R+ Sbjct: 228 ----WLMTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLT-MTKDESKAYVRYMMNRRLL 282 Query: 319 AVGLDLPFQTRSNPIPWINTWLVSDNVQ--VAPQEVEVSSYL-VGQIDSEVDTDDLSNF 374 +G F+ + P PWI L + E V +Y G + E+D ++ Sbjct: 283 QLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQASGALVGELDWSKVNQL 341 >UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain n=1 Tax=Escherichia phage rv5 RepID=B3RGP5_9CAUD Length = 362 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 93/372 (25%), Positives = 174/372 (46%), Gaps = 17/372 (4%) Query: 5 TFSQTK--NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 F+ + P+F GQ + + +KY +L +KQ W +EVD+S+ D Sbjct: 3 VFNAENTAHKTGDYPLFLGQQMGMYDSINKKYPQLFELYKKQKEQDWAEDEVDLSQSISD 62 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 + + + + L +Q DS+ RS P I+ EL T + + E +H+ + Sbjct: 63 FVTCSKSTYDVMVQTLMWQWEADSVAARSIICLFSPFITNSELFTLLMKQSEIEVLHALT 122 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 Y+ I+R + + + ++I N+ + R+ I Y EL + + + L Sbjct: 123 YSEIVRQCLPNAREIIEEIQENQNVLSRSGVIVKYMQELEVIGAKYRLDPSSVKEDI--- 179 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 ++K + L ++ ALE+I F SFAC+FA AE+ + A++++ I DE LH Sbjct: 180 -------VRKCILRALFALLALESIEFIASFACTFAVAEQGIFVQVAQLVQKIMLDEMLH 232 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLN 301 G ++++L + DP + E K E ++ + +E W+DY+F +G ++IGLN Sbjct: 233 SKGDFAIIDILLN---DPAWEKSFLEIKGELKEILDEVRTKEYGWSDYIFSEGRAIIGLN 289 Query: 302 KDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 +L ++V+Y + G+D F +P+P++ W+ Q A QE+ + Y V Sbjct: 290 SPLLKEWVDYNCSPIYDYYGIDKDFVPPTKDPLPFMQVWMKPSLQQTANQEMSNTDYRVN 349 Query: 361 QIDSEVDTDDLS 372 ++ + + Sbjct: 350 TTVNDAEEEIWE 361 >UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bacillaceae RepID=B1HSG7_LYSSC Length = 318 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 135/350 (38%), Gaps = 41/350 (11%) Query: 26 VARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLD 85 +++ ++ + ++Q W PEE+ VS+D +++ + + TLLD Sbjct: 4 AVNWNKATSELAQIFWDQQWKQIWFPEEIAVSKDIQQWKSF--EHQDTYKKVFAGLTLLD 61 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIVT 143 ++Q + + + + + E IH++SY++I + + +F+ + Sbjct: 62 TVQTNIGMNRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWVKK 121 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 NE +Q +A I+ Y+ + E + L+ + S Sbjct: 122 NEYLQYKANKIADIYNSIEEG-------------------------DAESLWKAMFSSVM 156 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 LE+ FY F + + +A+II LI RDE++H L + Sbjct: 157 LESFLFYSGFFYPLYLGGQGFLRNSAEIISLILRDESIHGVAVGFFAQNLYKQFSKEK-- 214 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 E + Y+L + Q E + + ++ + GL+ + + YV Y N + VG + Sbjct: 215 --QEALQLWGYELLLDLYQNEMKYTEDIYAET---GLSPE-VKAYVRYNANKALMNVGFE 268 Query: 324 LPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 F NPI + + ++ + ++Y ++ + + D + Sbjct: 269 AMFPEEEVNPI--VMNGIRNEGSTYDFFSQKGATYAKAKV-APITDDTFN 315 >UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=C7NA19_LEPBD Length = 335 Score = 217 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 71/349 (20%), Positives = 134/349 (38%), Gaps = 34/349 (9%) Query: 26 VARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLD 85 ++ + D E E+ L FW E S+D + +L K ++ L TLLD Sbjct: 8 AVNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVLGGLTLLD 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIVT 143 ++Q + ++ I + + + ETIH++SY+ I + + F + Sbjct: 68 TLQSHTGMPKIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWVQE 127 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 N +Q +A I +YY ++ + K+ + + L + Sbjct: 128 NPHLQYKANKIDTYYQKM-----------------------NNPEASKRDIAMALAASVY 164 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 LE FY F A + M + II+ I DE++H + L + + E A Sbjct: 165 LETYLFYSGFFLPLWLAGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKA 224 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 ++ E K+ YDL + E + D ++ D + G + +Y+ Y N + +G + Sbjct: 225 DMRAELKKLMYDL----YENETRYTDEIYGDLGLTG----NVKEYIRYNANKALMNLGFE 276 Query: 324 LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 F+ + N P + L + Q + ++Y + DD Sbjct: 277 EEFEVK-NVNPIVLNGLNVETTQHDFFSKKSTNYEKALEVVHLHDDDFK 324 >UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6V3_SULNB Length = 337 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 72/372 (19%), Positives = 146/372 (39%), Gaps = 44/372 (11%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 ++ + L E ++ G P +++ KY + + + W P EV+ S ++ +++A Sbjct: 7 YNPQGEEILDEKIYGGSPTGFVDFNRSKYRWDSNIYDLMNANTWFPSEVNTSTEKKNFEA 66 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L ++E+ I+ + DS Q L + +++ + E HS+SY Sbjct: 67 LTDNEQSIYKMTFAQLSFNDSAQ-EEYLSDFRRLANNRLVKSVISLQIMQEVNHSKSYAV 125 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 ++ + VF+ + + K+ ++ + + I+ S Sbjct: 126 LLDA-CGNSEEVFNLYKYDAALNKKNLQVAEQFAKYIDGGS------------------- 165 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE-ALHLT 244 K+ L M+ LE I F + F+ + + + G +I+ IARDE HL Sbjct: 166 -----ADKMLLSAMASVNLEGIYFLLGFSYIYLLG--DKVPGARDMIKFIARDELNTHLP 218 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 ++ ++ + IA Y + A + E ++ YL ++G+ ++ Sbjct: 219 LFANIFKTIQKENN------IATSTIDAAYKMIQDAVKIELEYGHYLLDQFPIMGVTHEL 272 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPI--PWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + Q V N R++ +GLD F + + L + V+ E VS+Y I Sbjct: 273 MEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKSNFFESNVSNYAKSSI 332 Query: 363 DSEVDTDDLSNF 374 DL++F Sbjct: 333 -------DLNDF 337 >UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9V1_HYDS0 Length = 319 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 134/327 (40%), Gaps = 35/327 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSI 87 D Y L K + +W PEE D++ D+ ++ + L + E+H + + + + + Sbjct: 25 LDSVVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGW 84 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 G++ + I E ++ E H ++ +I+ + P V+ ++I Sbjct: 85 VGQNILE-ISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLDLKPHEVYAMHENVKEI 143 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +++A+ L E + +L+ + + LE + Sbjct: 144 KRKADFEVKRAMALCEEPTEENLIEDI-----------------------FVYYAILEGL 180 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 F+ F AF R +++ A ++R I +DE HL ++LN L + + Sbjct: 181 FFFSGFVTPLAFGRRGVLKNVAALVRWILKDETRHLAFGIYLLNELLKDKNKND------ 234 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 K + L +A E ++A + +IGL+ + YV+Y+ + RM+++G D + Sbjct: 235 -YKDKFRVLMEEAVDIETEYARVAMPE-KIIGLSFETYTSYVKYLADRRMRSLGFDAIYG 292 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEV 354 + NP+ W+ T ++ E +V Sbjct: 293 -QKNPMKWLTTQTDLPDL-TNFFEAKV 317 >UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta subunit n=83 Tax=root RepID=Q5HMW6_STAEQ Length = 340 Score = 216 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 140/361 (38%), Gaps = 43/361 (11%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 +D + I ++ + W EE S+D ++ L E+ ++ L T L Sbjct: 8 RATNWD-KDNSIALTYWKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKALSGLTGL 66 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVF---DDI 141 D+ QG L + E IH +SY+HI +++ + + + Sbjct: 67 DTTQGTEGMPLLAFHYPEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKEWV 126 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 N+ + K+ + I++ Y +L++ +++Y+ + S Sbjct: 127 PANKYLNKKTKLITTNYYKLLK-----------------------PNPTDREIYVAMASS 163 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ F+ F A + M + +IIR I DE +H +GT + ++ E Sbjct: 164 IFLESFLFFSGFYYPLYLAGQGKMVHSGEIIRKIILDETIHGSGTGYAAQVIFDKFSKEE 223 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 +I +E +LF Q E ++A L+ + + + +Y++Y N + +G Sbjct: 224 QEDIRKEL----MELFDQLYFNEVEYAASLYDKLGLT----EDVIRYIQYNGNRALMNLG 275 Query: 322 LDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSY-----LVGQIDSEVDTDDLSNFQ 375 + F NPI + L +D V+ Y V D + D +++ +++ Sbjct: 276 WETVFNPEPFNPI--VENGLRTDTTNHDFFSVKGDGYTLALNQVPLRDKDFDFNNVISYE 333 Query: 376 L 376 L Sbjct: 334 L 334 >UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Deinococcus RepID=Q1IXG4_DEIGD Length = 319 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 117/349 (33%), Gaps = 44/349 (12%) Query: 23 PVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQT 82 + + + + +Q + W EE+ ++ D D++AL E+ + Sbjct: 2 SKSATNWSEVGDGFTQAFYIQQQAQLWFSEEIPIASDAADWRALSPAERTCYTRVSAGLN 61 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV--NDPSVVFDD 140 +D++QG L + + + +AF E +H+RSY+ + + ++ F+ Sbjct: 62 AMDTLQGEVGMPLLAAGEDDHQRKATLAMFAFMENVHARSYSMANKTFLSASEEREAFEW 121 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 I +Q++ Y+E +++ Sbjct: 122 IEMQPHLQRKITVFRRLYEEG-------------------------------DALTRMLA 150 Query: 201 VNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 LE FY F A + M ++ LI DEALH + + + Sbjct: 151 SCLLETALFYSGFFYPLYLAGQGKMSHMGEVFTLICADEALHGSYVGLLFQERFAALPQG 210 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 E A + +Q L + + E + D ++ + + + +V Y NI + Sbjct: 211 EQAAVRARFEQ----LAREFYENECAYTDEVYAEVGL----ASEVKTFVRYNFNICCDNL 262 Query: 321 GLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEV-SSYLVGQIDSEVD 367 GL+ F NP+ +N + ++ Y + D Sbjct: 263 GLERLFPEEEVNPLV-LNGIRATGGTTHDFFSIKGAGGYAKITAEPLTD 310 >UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0JA50_BLASP Length = 357 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 128/350 (36%), Gaps = 36/350 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLD 85 + +Y + KQ + W E+++ D D+ + L + EK++ LK + Sbjct: 8 LNFKPFEYQWAYEYWFKQQNAHWLHTEINMQSDIYDWNKNLTDQEKNVIGDILKGFAQTE 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 + G + + IPE++ + + ETIH+ +Y+++ + D F + ++ Sbjct: 68 TEVGNYWSEMIPKWFPIPEIKMMGQAFGSFETIHAAAYSYLNDILGLD---NFHAFLEDD 124 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I + + + + ++ + A E Sbjct: 125 VIMNKLKSLMDVRNS-----------------------DHGKYNKEEIARSVALFSAAAE 161 Query: 206 AIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 ++ + SFA +F + ++G + I RDE+LH + E + Sbjct: 162 GVQLFSSFAVLLSFRKSNRLKGVGQQIIFSVRDESLHSEAGCKIFRTFCE-----ENKGL 216 Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 E ++ Y A + E + D +F + + ++ L +++ N++++ +G Sbjct: 217 KEIVERSVYHGVDLALKNEFVFIDKIFGGRDLCTIKREELKNFMKDRANMKLRELGFFDS 276 Query: 326 FQTRSNPIPWINTWL--VSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSN 373 + + +N + +S Q + + Y + + + D S+ Sbjct: 277 YHVDRRMLDNMNWFYITISGEQQTDFFDNRETGYSK--PNEDWNEDLFSS 324 >UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Bacteria RepID=A1XG51_BORHD Length = 321 Score = 203 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 125/355 (35%), Gaps = 42/355 (11%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 Q +++ + ++ + FW EE+ +S D++ + L E+ ++ L Sbjct: 3 QNREAINWNRLNNSYTKMFWDQNIRQFWVDEEIPISDDKLVWNTLDGEERDVYEKVLGGL 62 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFD 139 TLLD+ QG L I + + + E +H++SY+ I ++ ++ +F Sbjct: 63 TLLDTEQGSVGMPRLALAIDNLDYKPVLGFMGAMEHMHAKSYSSIFSSLSNIDRIDHIFG 122 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 + T Q + + I Y+ + + LY L Sbjct: 123 WVKTYRNFQDKLDLILGKYNSI---------------------------HDRMSLYKALC 155 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE FY F A + M + +II LI RDE++H + + Sbjct: 156 TSVFLETFLFYSGFFYPLYLAGQGKMVNSGEIINLILRDESVHGVFVGLLAQ----EEFN 211 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + ++E + + E + L+ + G + +V Y + + Sbjct: 212 KMTFKEQAFAQREATLILERLYYLESAYTKDLYSSIGLEG----AVDVFVRYNADKALMN 267 Query: 320 VGLDLPFQTRS---NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 +G D F R NP+ + L ++ + + Y+ + DD Sbjct: 268 LGFDSAFNIRDIDVNPL--VLNGLRTNTKTHDFFSTKGNGYIKPMRVEPLQDDDF 320 >UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7_9CAUD Length = 387 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 81/392 (20%), Positives = 158/392 (40%), Gaps = 35/392 (8%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + F+ K+D + G + Y +L ++ W E D S Sbjct: 7 LPKKIFNVAKSDYHLPEIILGDDPGLLDSIHTHYPKMWELYKRLKMLDWDELEFDFSTCL 66 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 ++++ + + I L +Q DS+ RS L P+++ + +E +H+ Sbjct: 67 VEFETCDKSTYDMMIKTLAWQWEADSVASRSIVNILSPVMTDSRVWAGYVRINDNEDVHA 126 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 +Y+ I+RN DP V+ D+I+ E+ Q+R ++ E + + L Sbjct: 127 LTYSEIVRNSFKDPKVILDEILRVEEAQERMVAVARTMGEAHDAVHAYAL---------- 176 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE- 239 + +EL K+++ +++ LE I+F SFA +FA + A ++ IA+DE Sbjct: 177 -NQVPNDQELYNKVFMFFIALYFLERIQFMASFAVTFAIGRTGAFQQIAAAVKKIAQDEF 235 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMI 298 +H Q ++ L +CK + +L + + E W +YLF +G + Sbjct: 236 EIHAQYGQEVIRALL---ATERGKLAYSQCKDKIIELLWEIVKTEVTWINYLFSEGRELT 292 Query: 299 GLNKDILCQYVEYITNIRMQAV------------------GLDLPFQTRSNPIPWINTWL 340 G+N L +V + N + G D + NP+ ++ +L Sbjct: 293 GVNATKLINWVLFNANAAATFLSIENDVVEQYQVEFKESAGFDFVWP-EKNPLLYMEDYL 351 Query: 341 VSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + Q +PQE E Y+V ++ + ++ Sbjct: 352 DISSTQASPQEEEKPDYMVNVVNDVGEEEEFE 383 >UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Bacteria RepID=RIR2_MYCGE Length = 340 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 132/359 (36%), Gaps = 47/359 (13%) Query: 19 FFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNL 78 F G + ++ + ++ + + FW PE++ VS D ++ L + + + Sbjct: 23 FQGN-LRSVNWNLVDDEKDLEVWNRIVQNFWLPEKIPVSNDIPSWKKLSKDWQDLITKTF 81 Query: 79 KYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV-- 136 TLLD+IQ ++ + + +AF +H+RSY I + + Sbjct: 82 TGLTLLDTIQATIGDICQIDHALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSEQINA 141 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 + +V E +QKRA+ + YY + S Sbjct: 142 AHEWVVNTESLQKRAKALIPYYTGNDPLKSK----------------------------- 172 Query: 197 CLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 ++ + Y F F + R+ + + IIRLI RD+ +H + + Sbjct: 173 --VAAALMPGFLLYGGFYLPFYLSSRKQLPNTSDIIRLILRDKVIHNYYSGYKYQRKLEK 230 Query: 257 ADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIR 316 +E K ++L + + EKD+ L+ ++ D ++ Y Sbjct: 231 LP----LAKQKEMKAFVFELMYRLIELEKDYLKELYEGFGIV----DDAIKFSVYNAGKF 282 Query: 317 MQAVGLDLPF---QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 +Q +G D PF +TR P + +D SSY++G + E + DD + Sbjct: 283 LQNLGYDSPFTAAETRIKPEIFAQLSARADE-NHDFFSGNGSSYVMG-VSEETNDDDWN 339 >UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Brachyspira RepID=C0QY28_BRAHW Length = 356 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 83/358 (23%), Positives = 153/358 (42%), Gaps = 19/358 (5%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 E +FFG + R D +++ KL E W +EVD D+ + +LPE + F Sbjct: 12 NEKIFFGDFGHYLRIDSVSHEVARKLKEASEGNTWFSKEVDYKSDKTRFSSLPEDAQRAF 71 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 N+ YQTL+DS + L +++ A E IH+ SY++ + + Sbjct: 72 KLNIAYQTLMDSGVTSGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHE 131 Query: 135 -SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 + D + +E ++ R E L G N + +L E K+ Sbjct: 132 ATDTLDLVYNDEFVKHRME-------------KEVELFGNVDELCNLENSPATLDEKKQA 178 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAER--ELMEGNAKIIRLIARDE-ALHLTGTQHML 250 + L+ + LE+++F SF +F + G K I+LIA DE H+ ++++ Sbjct: 179 VLKLLIGIYLLESVKFPFSFLVTFTINNNYDNAIAGFTKTIKLIAHDELNTHVPTGKNVM 238 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQ-AAQQEKDWADYLFRDGSMIGLNKDILCQYV 309 N+LR + E + +E WA YLF + G+N + ++ Sbjct: 239 NILRKENEQGFTHLFKSGWFNETARAMAEFTVNEEIKWAKYLFDGYQVAGINSSVSEHFI 298 Query: 310 EYITNIRMQAVGLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 +Y +R++ +G++ P+ + + I W N++ + A QE +SY G + +++ Sbjct: 299 KYWAGVRLRDLGVESPYNEKKSDVIDWFNSYRDINKQNAALQETTNTSYQKGALKNDL 356 >UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TFJ9_VANPO Length = 351 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 118/345 (34%), Gaps = 49/345 (14%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--A 65 + K Q E + + KY +K+ + FW EE+D S+D ++ Sbjct: 18 ELKELQKDESILTENKRRFVLFP-IKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDK 76 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 + + EK FI L D + + L PE + + + IH Y Sbjct: 77 ITKDEKEYFIRLLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGI 135 Query: 126 IIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +I ++V D +F++I I+++ E S+++ Sbjct: 136 LIDSLVKDDEKRTSMFEEIKDLTNIKEKIEYAKSWFE----------------------- 172 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L++ A+ I ++ +F + L+ G + + RD LH Sbjct: 173 ------NEDNLFGEKLIAEAAVLGIFSLSAYVSVLSFQKGGLIPGFVTGVDNMLRDRGLH 226 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 + M L++ D + + V A + EK + L Sbjct: 227 VDFCCLMYAHLKNQID-----------SEIVQKIIVDAVEIEKKSLLKALPIIKV-NLKI 274 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQV 347 D + Q++EY+ + + A G + + NP ++ ++ N Sbjct: 275 DEMNQFIEYVADSILVAFGNEKHYNAT-NPYEFMENVVLPGNTNS 318 >UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P4N2_FUSNV Length = 245 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 28/246 (11%) Query: 6 FSQTKNDQLK-EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F+ +D L + G N+ + +Y +L ++ FW PE+VD+++D+ DY+ Sbjct: 11 FNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKNDYE 70 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L E+ + L + LDSIQ + + ++ PE+ + F E IHS+SY Sbjct: 71 NLTVPEREAYDGILSFLIFLDSIQTNNI-PNISDHVTAPEVNLLLAIQTFQEAIHSQSYQ 129 Query: 125 HIIRNIVND--PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +II +I+ +++D ++ + +R I+ Y + I+ Sbjct: 130 YIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFID------------------- 170 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 + + +++ LE++ FY F + A R M G + IIRLI RDE H Sbjct: 171 -----EQSDENFAKVIIANYLLESLYFYNGFNFFYLLASRNKMVGTSDIIRLINRDELSH 225 Query: 243 LTGTQH 248 + + Sbjct: 226 VVLFRS 231 >UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 Tax=Caenorhabditis elegans RepID=Q20993_CAEEL Length = 500 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 33/224 (14%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 EP+ + + + +K ++ FW EEVD+ +D ++ L E+ Sbjct: 307 EPLLAPNNNRFVVHPIV-HRDIWEFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFIS 365 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND-- 133 S L + D I + + + E + E IHS Y ++ + D Sbjct: 366 SILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDA 425 Query: 134 -PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +++F+ I T + I+ +A+ + + Sbjct: 426 ERNILFNAITTFKFIKAKADWCLRWISDHNAP---------------------------- 457 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 L +V A+E I F SFA F +R L+ G LI+ Sbjct: 458 -FSERLAAVAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELIS 500 >UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome shotgun sequence. (Fragment) n=2 Tax=Euteleostomi RepID=Q4TC55_TETNG Length = 369 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 4/147 (2%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + Q Y ++ +K + FW EEVD+S+D +++L + E+ Sbjct: 1 EEPLLKENPRRFVIFPIQ-YQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFI 59 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + + E + E IHS Y+ +I + +P Sbjct: 60 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEP 119 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYY 158 S +F+ I T ++K+A+ ++ Sbjct: 120 SEREYLFNAIETLPCVKKKADWALNWI 146 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 13/43 (30%), Gaps = 2/43 (4%) Query: 330 SNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 NP ++ +S + E V Y + + + Sbjct: 324 ENPFDFMEN--ISLEGKTNFFEKRVGEYQRMGVMAGAADNTFR 364 >UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), beta subunit n=6 Tax=Bacteroidetes RepID=C6X1E6_FLAB3 Length = 324 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 137/348 (39%), Gaps = 39/348 (11%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 Y +Y + +E FW EVD + D D+Q+ L HEK+ + L ++ Sbjct: 10 YKPFEYPEIMQFVEAINKSFWVHSEVDFTADVQDFQSQLEPHEKNAVKNALLAIAQIEVS 69 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 ++ L + PEL T+A E HS +Y+ ++ + + F+ +V I Sbjct: 70 V-KTFWGNLYNHLPKPELNGLGSTFAECEFRHSEAYSRLLEVLGYN--DAFNHVVEIPAI 126 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +KR + +S+ + K+ + L+ +E + Sbjct: 127 KKRIDFLSNVLK------------------------HANSTTPKEYVSSLLLFSILIENV 162 Query: 208 RFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + FA +F + M+ + II + DE +H +++N +R D + Sbjct: 163 SLFSQFAIILSFTRFKGYMKNVSNIIAWTSVDEQIHANAGIYLINKIREEQPD----LLT 218 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + ++ Y L + + E + D++F G + ++K+ L +++Y + ++ +G+ + Sbjct: 219 DSDIEDIYTLVDHSIELEAEILDWIFEMGEIDNVSKENLLNFMKYRVDDSLKKIGMQTRY 278 Query: 327 QTRSN---PIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + P+ W + ++++ Y D + +DL Sbjct: 279 NVSGDEYRPMVWFEEEVFANSMD-DFFAKRPVDYTKH--DKSITENDL 323 >UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TLQ4_VANPO Length = 361 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 62/380 (16%), Positives = 134/380 (35%), Gaps = 67/380 (17%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QA 65 + + Q KEP+ + + + +K+ + FW EE+D S D I++ + Sbjct: 31 LEVEESQSKEPILMENKSRFVLMPIKFHTV-YDGYKKREALFWPAEEIDFSHDIINWGKK 89 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNV-ALLPLISIPELETWVETWAFSETIHSRSYT 124 +H+K I +L + S+ G + + IPE + + E IH Y+ Sbjct: 90 ASDHDKSIIKKSLAFLCS--SVLGSFYLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYS 147 Query: 125 HIIRNIVNDPSVV---FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 I +V++ + F D+ + I+++ ++D+ Sbjct: 148 LAIDQLVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDK--------------------- 186 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 L++ +++EAI VSF + +++++ G I+LI +D + Sbjct: 187 --------ESSLFAEKLVAFSSIEAIFSLVSFFSIMSLEKKDIIPGLISGIKLILKDHIV 238 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H + + L+ D + +A + E + + + + + Sbjct: 239 HCDFQMSIYSELKKRLDP-----------GIIERIVTEAVEIELETLEDDYFNKQLDKET 287 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTR-----------SNPIPWINTWLVSDNVQVAPQ 350 K + +EY+ + + G F + N IP + + + + Sbjct: 288 KADIKNVIEYVGDRVLMGFGNQKHFHSANPYDNLEHECFENVIPKTESSDSQNTTKFSKT 347 Query: 351 EVEVSSYLVGQIDSEVDTDD 370 E +S E+ DD Sbjct: 348 EKIAAS--------EISFDD 359 >UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_AQUAE Length = 696 Score = 181 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 112/277 (40%), Gaps = 30/277 (10%) Query: 5 TFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ-LSFFWRPEEVDVSRDRID 62 F+ + + K + G P N+ ++ KY L + + FW PEE+ + DR Sbjct: 14 IFNPQGDREASKRKIIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQ 73 Query: 63 YQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 Y+ L ++EK + L + LDS Q +I+ PE+E + F E++H+ Sbjct: 74 YETVLSDYEKRAYELVLSFLIALDSFQVDMLKE-FGRMITAPEVEMAITAQEFQESVHAY 132 Query: 122 SYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 SY I+ ++V+ +++ +E++ +R + I+ Y+E I + Sbjct: 133 SYQFILESVVDPVKADEIYNYWREDERLLERNKVIAELYNEFIRKPN------------- 179 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 ++ + LE++ FY FA + + M + I+ I RDE Sbjct: 180 -----------EENFIKATIGNYILESLYFYSGFAFFYTLGRQGKMRNTVQQIKYINRDE 228 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 + GT+ + + ++ + E ++ Sbjct: 229 LCFIEGTEVLTKRGFVDFRELREDDLVAQYDIETGEI 265 Score = 97.5 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 H+T ++++N LR + E ++ + F A +E W Y+ ++ ++G Sbjct: 575 NCHVTLFRNIINTLRKENPE----LFTPEIEKWIVEYFKYAVNEEIKWGQYVTQN-QILG 629 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 +N ++ +Y++Y+ N+R+ +G D + NP+ WI+ + +N + + + +Y Sbjct: 630 INDVLIERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYS 689 Query: 359 VGQ 361 Sbjct: 690 KAN 692 >UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=Q19CR4_9CAUD Length = 332 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 114/338 (33%), Gaps = 41/338 (12%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQG 89 KY F KL ++Q+ FW +E V D D + L E + + LK T+ + G Sbjct: 18 IIKYPEFGKLADEQMHAFWPWDEPVVDNDIQDLRTKLTPGELNGITTVLKLFTIYERKVG 77 Query: 90 RSPNVALLPL-ISIPELETWVETWAFSETI-HSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + PE+ ++ E H+ Y + + D + +E++ Sbjct: 78 EDYWSGRIAHTFGRPEINRMATLFSAVEGNSHAPFYNKVNEVLYLDDEAFYTSWKESEEL 137 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +R + + ++ + + +E Sbjct: 138 SRRIQFVGKSVNDPDD-------------------------------AKSFAAFTFIEGA 166 Query: 208 RFYVSFACSFAFA----ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 Y SFA F ++LM + + L DE H G + L + Sbjct: 167 VLYSSFAFLKHFQAQECGKDLMRNICRGVDLSVADEHHHSIGGAMLFQTLCREMKEKYGE 226 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 ++ + K + ++ Q E D +F + + G+ D L +V+ N+ ++ +G + Sbjct: 227 DVRAKLKNDIINMARQVFDHESGIIDLVFAE-PIDGITADELRVFVKSRINLCLENLGYE 285 Query: 324 LPFQTRSNPI-PWINTWLVSDNVQVAPQEVEVSSYLVG 360 F+ +NPI W ++ S Y + Sbjct: 286 PIFEIENNPIADWF-YRTINAKKFHDFFTGSGSEYNIN 322 >UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Ostreid herpesvirus 1 RepID=RIR2_OSHV1 Length = 579 Score = 178 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 65/376 (17%), Positives = 130/376 (34%), Gaps = 66/376 (17%) Query: 15 KEPMFFGQPVNVAR---------YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 P++ G + Y K S W+ E+D D ++ Sbjct: 51 DHPLYGGATDHHKDIVGKYDHALLKPAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQ 110 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 + E+E+ L + + D++ +PE + +++ +E +H R Y + Sbjct: 111 ISENERDCVRKVLAFFAVGDTLVKDRIA-IFADEFPLPECKDFIDWQTVNEGVHQRVYNN 169 Query: 126 IIRNIVNDPSVVFDDIVTNEQ-----IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 + +V D + D + + I+K+ + + + Sbjct: 170 YLDALVKDKIYLADLVNAYKDPEFAPIKKKVDWLGKIISVENDSR--------------- 214 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 ++ EAI F SFA F M I RDE Sbjct: 215 --------------GEMVVGQVCTEAIMFAASFAILLKF-RAPYMRALVLGNEFIRRDET 259 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LH +L L+ D + +L +A + E ++A+Y+ +G + + Sbjct: 260 LHFRFYAELLRLMPDRPSD-----------ERIAELLTEATEIELEFAEYVVPEG-VKYI 307 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPF-QTRSN----PIPWINTWLVSDNVQVAPQEVEVS 355 KD L Q+V+ TN + + ++ + + N P+ ++NT + ++ E + + Sbjct: 308 TKDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNT--LESEQKINFFEGKAT 365 Query: 356 SYLVGQIDSEVDTDDL 371 Y Q VD ++L Sbjct: 366 EYNTKQYK--VDFNNL 379 >UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD86 Length = 224 Score = 177 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 29/236 (12%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TL Sbjct: 9 HNAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTL 68 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND--PSVVFDDI 141 LD+ QG + +++ L + + + E IH++SY+ I ++++ +F+ I Sbjct: 69 LDTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWI 128 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 T +Q++A+ + + Y+ ++ LYL +++ Sbjct: 129 ETEPTLQRKADLVLAQYE---------------------------NTTNQEGLYLSMVTS 161 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 LE+ FY F + + M + +II LI RDE+LH + + Sbjct: 162 VFLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLAQEIYDSF 217 >UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436B Length = 322 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 125/342 (36%), Gaps = 37/342 (10%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGR 90 Y + + Q S FW +E++V +D D + + E E H I+ L+ TL + + GR Sbjct: 13 FDYPEAIQFAKVQSSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLFTLYELVAGR 72 Query: 91 SPNV-ALLPLISIPELETWVETWAFSE-TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + +L P++E T+ F E +H+ Y I ++ + + V + ++ Sbjct: 73 DYWLGRVLKTFPRPDIERMAATFGFFELNVHAPFYNKINEALMLNTDEFYLAYVNDPILK 132 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 +R E + S +E L + + +E Sbjct: 133 ERMEFVDSLVEEDDP-------------------------------LYSLGAFSMVEGAV 161 Query: 209 FYVSFACSFAF--AERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 Y SFA F + + + I RDE LH G + N L+ E I Sbjct: 162 LYSSFAFLKHFQAKGKNKLMNVVRGINFSVRDENLHCEGGAWLYNTLKQEI-KSEGGYIN 220 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + + A+ E D +F G M G+ + + +V+ NI + +G++ F Sbjct: 221 PNLEYDLANCAHTIAEHEFRIVDMIFEKGEMEGITAEQMKTFVKSRVNICLAQLGIEPVF 280 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 + +N + ++ + +SY + + Sbjct: 281 EVSNNIVAEWFYDGINGVMFHDFFSGIGNSYNRSWDEKGFNW 322 >UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ5_FLAJ1 Length = 324 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 127/350 (36%), Gaps = 39/350 (11%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLD 85 Y +Y + E +W EVD + D D+ L EK ++L ++ Sbjct: 8 VNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHAHLSLAEKTAVKNSLLAIAQIE 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 +S + PE T+A E HS +Y+ ++ + + F+ ++ Sbjct: 68 VAV-KSFWGNIYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDE--FEKLLDVP 124 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I++R + +S+ + ++ +K + ++ +E Sbjct: 125 VIRRRVDYLSNVLKD------------------------TKSQDNRKYMVSLILFSILIE 160 Query: 206 AIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 + + FA +F + M+ + II + DE +H G +++N +R D Sbjct: 161 NVSLFSQFAILLSFTRFKGYMKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPD----Y 216 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 EE + + E D D++F +G + + K L ++++ + ++ + + + Sbjct: 217 FDEETLALVRETVKDSIAVESDILDWIFEEGEIESIKKGDLVNFMKFRIDESLKQINIPV 276 Query: 325 PFQT---RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 F + W + ++++ Y D + +DL Sbjct: 277 IFDVKVEDYKALAWFEEEVFANSLD-DFFAKRPVEYTKH--DKSITANDL 323 >UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Marseillevirus RepID=D2XAR5_9VIRU Length = 280 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 105/306 (34%), Gaps = 44/306 (14%) Query: 60 RIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLIS--IPELETWVETWAFSET 117 D+ L + EK L + D I + +S E+E + A +E Sbjct: 1 MSDWSKLTKGEKKFVKLELAFFAQFDGIVVENLVRNFQQEVSSYAKEIEWFYILQAANEL 60 Query: 118 IHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEG 174 IH+ +Y ++I N++ P D I I+ A + + D I + Sbjct: 61 IHNETYMNLIDNLLPSPKKREKALDAISNYPSIRLIANWVERWMDRRIPLPE-------- 112 Query: 175 THTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRL 234 +++ ALE + F SFA F ++G K Sbjct: 113 ----------------------RIIAFAALEGVIFTGSFAAIHYFTITNRLKGLRKANEW 150 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 I++DEALH + + + + ++ ++ A + R Sbjct: 151 ISKDEALHQRFAEAVYRYIVD-----VIKAFPRVSQERVQEILGSAIDAVSPFIHDCLR- 204 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEV 354 + ++ + + Y++ + ++G + F + S + ++ L+ + + E V Sbjct: 205 FKNVNIDAERMIGYMKNAADGLAFSLGYEKFFNSDS-SLDYM--LLIGMDNKTNFFEEVV 261 Query: 355 SSYLVG 360 + Y G Sbjct: 262 ADYAKG 267 >UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Environmental halophage 1 AAJ-2005 RepID=Q2XUY1_9VIRU Length = 358 Score = 171 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 125/348 (35%), Gaps = 39/348 (11%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSI 87 +Y F ++ + +W +E + D DY+ E+ + ++ + Sbjct: 44 LKPYEYTDFLDYVDAVRNSYWVHDEFNFDGDIQDYRVNTTPAEQTTIKRTMLAIAQIE-V 102 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 Q ++ + + E+ T+A SE H +Y+H++ + + F+ I + Sbjct: 103 QVKTFWSDIYEDMPKAEVGNVGMTFAESEVRHMDAYSHLLDVLGIEDE--FEQITEVPAV 160 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 Q+R E + Y + S ++ + LM +E + Sbjct: 161 QQRIEYLDEYLE------------------------MGSSENKQESVMGILMFSTFVEHV 196 Query: 208 RFYVSFACSFAFAER-ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + F +F + + +G A + +++E +H Q ++ +R D Sbjct: 197 SLFSQFLIMTSFDKHEKKFKGIANAVEATSKEEQIHGLFGQELVETIREENPD----LFD 252 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 ++ E D QA + E + D++ DG + L ++ + +++ N + G+D F Sbjct: 253 DDFTDEIQDACQQAYEAESEILDWILEDGELDFLPREHIDAFLKDRFNQSLDNAGVDPVF 312 Query: 327 QTRSNPIP---WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + + W + + + ++Y V DD+ Sbjct: 313 DPDEDVVDETRWFDE-DIMMTKENDFFSKRSTTYNKH--TQSVTADDM 357 >UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain n=247 Tax=Herpesviridae RepID=RIR2_HHV1K Length = 340 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 101/336 (30%), Gaps = 46/336 (13%) Query: 35 DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 L + W E+ D D L E E + + + D + + Sbjct: 44 PDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLG- 102 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV----TNEQIQKR 150 L L ++ + E HSR Y I + ++ + V + I+ + Sbjct: 103 GLSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVAGTINHPAIRAK 162 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + + + E + + L + +E I F Sbjct: 163 VDWLEARVRECASVPEKFIL------------------------------MILIEGIFFA 192 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 SFA L+ + LI+RDEA+H T + ++ N G P Sbjct: 193 ASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPP--------P 244 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI--LCQYVEYITNIRMQAVGLDLPFQT 328 Y LF QA + E + S I + + YV + + + + + F Sbjct: 245 DRVYGLFRQAVEIEIGFIRSQAPTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSA 304 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDS 364 P L+S + E +SY ++ Sbjct: 305 PP-PDASFPLSLMSTDKHTNFFECRSTSYAGAVVND 339 >UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subunit 1 n=23 Tax=cellular organisms RepID=Q3IM05_NATPD Length = 336 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 122/340 (35%), Gaps = 37/340 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLD 85 + +Y F + + +W E + S D D++ EK + + ++ Sbjct: 20 TQLKPYEYADFLDYKDAIRNSYWVHTEFNFSGDVQDFRTNTTPAEKTVIKRTMLAIAQIE 79 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 +Q ++ + + E+ T+A SE H +Y+H++ + F+++ Sbjct: 80 -VQVKTFWADIYDEMPKTEVGNVGMTFAESEVRHMDAYSHLLDILGITED--FEEVTDVP 136 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I+ R E + Y ++ + ++ + L+ +E Sbjct: 137 AIEDRIEYLDKYLEK------------------------SESDDKQEYVMSILLFSTFVE 172 Query: 206 AIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 + + F +F + ++ +G A + +++E +H ++ +R D Sbjct: 173 HVSLFSQFLIMMSFDKYKKKFKGIANAVEATSKEEQIHGLFGVELVETIREENPD----L 228 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 E+ ++E +A + E D++F +G + L + + ++ N ++ VG++ Sbjct: 229 FDEDFEEEVQAACQRAFEAEMKILDWIFGEGELEFLPRTHVDAFLRDRFNQSLENVGVEP 288 Query: 325 PFQTRSNPIP---WINTWLVSDNVQVAPQEVEVSSYLVGQ 361 F+ + W + + ++Y Sbjct: 289 IFEPDDGLLEETRWFDE-DIMMTKDNDFFSKRSTTYNKHA 327 >UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M646_CANTT Length = 252 Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 5/157 (3%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-AL 66 + K + +EP+ + KY +K + FW EEVD+S+D D+ L Sbjct: 82 KLKQLEAEEPLLQENKRRYVMFP-IKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWNNKL 140 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 ++E++ L + D I G + + PE +++ E IHS Y+ + Sbjct: 141 NDNERYFVSRVLAFFAASDGIVGENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLL 200 Query: 127 IRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDE 160 I V DP +F+ I I K+AE + + Sbjct: 201 IETYVKDPQEADFLFNAIENIPCITKKAEWAIKWIQD 237 >UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain n=21 Tax=root RepID=RIR2_SHV21 Length = 305 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 116/337 (34%), Gaps = 54/337 (16%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 F +L ++ W P +V + D L E + + + + + + + L Sbjct: 16 FLELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIEDLL 75 Query: 97 LPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND-PSVVFD---DIVTNEQIQKRAE 152 ++ + E IH + Y +I+ + + + V+ DI+ + +Q++ Sbjct: 76 SQ-FDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKLR 134 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 ++ E + L +E I F S Sbjct: 135 WLNGRVTEASDKAEKILL------------------------------FLLVEGIFFISS 164 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 F F R +M G IARDE LH + + N + ++ P + Sbjct: 165 FFSIGLFRVRGIMNGICLANDYIARDEMLHTSAAALLYNTMTKSSERPS--------EDW 216 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF---QTR 329 Y LF +A + E + + + +N + Q+++ + ++++ L+ + Sbjct: 217 IYKLFREAVEVEFKFI--AAKGYGVSLVNVHEIRQFLQATADRILESINLNPIYGSLPPE 274 Query: 330 SNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 + P+ + S V E + S Y G + +++ Sbjct: 275 NCPLAY-----TSSTKSVNFFERDNSDYT-GTLTNDL 305 >UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VB17_NAEGR Length = 330 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 111/350 (31%), Gaps = 52/350 (14%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSF-FWRPEEVD--VSRDR 60 SQ K + E + P + Q Y ++ +K+L+ W E+ D + D Sbjct: 3 ELHSQLKQLEKSEEILSENPHRFTLFPIQ-YPKLWEIYKKRLASSIWSVEQFDQIIRNDI 61 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + + L + Q + A I I E + + + IH Sbjct: 62 SKLSEICNSDHSFIKIILAFLVAN-CKQKTNLWGAFKD-IQILEAKHFHGFRLAMKNIHY 119 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Y ++ + + K+++ + + Sbjct: 120 EMYCNLFEILTEETERSELIEKMINSTMKKSQYTKKWLNS-------------------- 159 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 L+ + +E I SF F +R LM LI RDE Sbjct: 160 ----------DNLFSERLIGLVCIEQIFLSASFFSIFWLKKRGLMSALTISNDLIFRDEE 209 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 H + + L+ ++ + + L +A EK++ L +I L Sbjct: 210 FHSNFLYSLYSNLKH----------SKLPQTLVHSLVKEAVDIEKEFITSL--PTELIEL 257 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQ 350 +++ + QYVE +++ + + G + F T N WI L++ + Sbjct: 258 DRNSMYQYVEVVSDNILISFGYEKLFHTE-NQCSWIQDMLMNKSG---FF 303 >UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain n=9 Tax=Lactobacillus RepID=D0R5X4_LACJF Length = 313 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 105/329 (31%), Gaps = 42/329 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++ + + + + P V + +D+ ++ LP++E+ + + + TL Sbjct: 8 KANNWNTVEEQVDHSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHSFGSLTLS 67 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFDDIV 142 ++Q + + E + E+I++++Y++++ ++ Sbjct: 68 STLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDAYEWAN 127 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 N +QK+ + +++ Y + + Sbjct: 128 QNPYLQKKMKFLNTVYQSGNAIQKKA-------------------------------AHV 156 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 L ++ SF + + A++I+ R L+ T E Sbjct: 157 FLSTGLYHSSFFGPLYLFGQHKLPRTAELIKYALRITTLNGIYTGIKFRRDFFKLSKKEQ 216 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 ++ YDL E L+++ + +D + Y+ Y N + +G Sbjct: 217 NKVH----DWVYDLCDNLYDNELSHIKLLYQNTDL----EDKVEHYIHYTLNKALMNLGQ 268 Query: 323 DLPFQTRSNPI-PWINTWLVSDNVQVAPQ 350 + + + P + T L+ + Sbjct: 269 EPKYPENVETLDPILTTGLMESAMIKDFF 297 >UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib beta subunit n=7 Tax=Lactobacillus RepID=Q040X9_LACGA Length = 320 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 102/339 (30%), Gaps = 43/339 (12%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 M + ++ + + + + P V + DR ++ LP+ E+ + + Sbjct: 5 RKMNKKSYYKTSNWNAVEDQVDRSAWARLNDIVYEPRRVPIHEDRDEFSHLPKTEQTMLL 64 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND-- 133 + L ++Q + + E + E+I++++Y H + Sbjct: 65 HSFGSLALSSTLQMKVSLSKIKQDAENSEEAAVYNALQYLESINNKAYGHALTEFSTSNE 124 Query: 134 -PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 F+ N +QK+ +++ Y + Sbjct: 125 QRDEAFNWANQNPYLQKKMRLLNTVYQSDNAIQKKA------------------------ 160 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + + ++ SF + + A++I+ R L+ T Sbjct: 161 -------AHVFISTGLYHSSFFGPLYLFGQHKLPRTAELIKYALRITTLNGIYTGIKFRR 213 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 E I + YDL + E + L+ D + +D + Y+ Y Sbjct: 214 DFFNLSKEEQKNIHK----WVYDLCDRLYANELNHIHLLYEDTGL----EDKVEHYIHYT 265 Query: 313 TNIRMQAVGLDLPFQTRSNPI-PWINTWLVSDNVQVAPQ 350 N + +G + + + P + T L+ + Sbjct: 266 LNKALMNLGQEPKYPENVETLDPTLTTGLMESAMIEDFF 304 >UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1H3S0_VITVI Length = 269 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 67/181 (37%), Gaps = 15/181 (8%) Query: 187 LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGT 246 L++ +E I F SF F ++ LM G LI+R E LH Sbjct: 91 PLCSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFA 150 Query: 247 QHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILC 306 + +LL+ Q+ + + +A + E + ++IG+ ++ Sbjct: 151 CLLYSLLQKQLP-----------WQKVHHIVHEAMEIETQFICEALP-CALIGMKATLMS 198 Query: 307 QYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 Y++++ + + A+G + + NP W+ + + + Y I S + Sbjct: 199 HYIKFVVDRLLVALGYERKYNVE-NPFDWME--FIFLQGNANFFQRRMGDYQKASIMSSL 255 Query: 367 D 367 D Sbjct: 256 D 256 >UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative n=10 Tax=Plasmodium RepID=B3L3V1_PLAKH Length = 335 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 118/345 (34%), Gaps = 52/345 (15%) Query: 11 NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 + Q + + + KY F ++ S FW E+ + +D+ +++ ++ Sbjct: 14 DAQNNDDILKENQFRWVMFP-IKYKTFWSYYKEVESLFWTAEDYNFDKDKKFLESIDKNM 72 Query: 71 KHIFISNLKYQTLLDSIQGRS---PNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + + +L D +L +I IPE + E IH Y I Sbjct: 73 LVKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIF 132 Query: 128 RNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 + D + + ++ + + K+ + ++ ++ I + L+ NG Sbjct: 133 ETYIPDAKQKRTIINKVIQLDSVLKKQKWLTELFETNIPFYNKLVLIYISKVLFNGTLNI 192 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 + + + CL +V+ I RDE LH Sbjct: 193 LIGYCKENSILPCLCNVH------------------------------EKIHRDEYLHGD 222 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 + N L + + D F A + E +A + D S++ + K+ Sbjct: 223 FSVMCCNHLNNKLK-----------YERLLDYFKMAVKLEYQFAIEML-DLSVLKIKKEQ 270 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPIPW--INTWLVSDNVQV 347 + ++EY+ + + + F ++ P W N +VS+N + Sbjct: 271 VKSFLEYLADTMLVNLKHPKYFNSKY-PFTWPEFNKIVVSENQKT 314 >UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain n=3 Tax=Thermus RepID=Q745Z4_THET2 Length = 324 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 103/335 (30%), Gaps = 35/335 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQ 88 Y +Y + + +W E D D+ E E+ + L ++ Sbjct: 10 YRPYEYPELLRFRDAIRHSYWVHTEFSFQSDLQDHALADEKERSLVERALLAIAQVELAV 69 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + + PE+ T+A SE H+ +Y H Sbjct: 70 -KLFWARVYDRFPKPEIAEVGLTFAESEVRHANAYAH----------------------- 105 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 + + + L + + ++L++ + E + Sbjct: 106 --LLELLGLEEAFGQALEGASALRDRAQALGEALRRAQGKDLREYALALFLFSAFTEHVS 163 Query: 209 FYVSFACSFAFAERE-LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + F A R +G + I +++E +H +L LLR+ + + E Sbjct: 164 LFSQFYVLMALNRRGNRYKGISNAIEATSKEENVHGLFGVELLRLLRTEHPE----ALGE 219 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 ++E L + E+ D+LF G + ++++ N + GL PF Sbjct: 220 GFQEEALRLAQGLFRAEEALLDWLFSAGEPALVGHRETLEFLKGRYNQVLALHGLPPPFP 279 Query: 328 TRSNPI---PWINTWLVSDNVQVAPQEVEVSSYLV 359 + W L++D +V +Y Sbjct: 280 VDEKALRDTEWFTLELLAD-KEVDFFNKRSVAYAR 313 >UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=Cryptosporidium RepID=A3FPS5_CRYPV Length = 339 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 104/339 (30%), Gaps = 26/339 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + Q E + P + KY L +K FW E + D+ + Sbjct: 7 ELLEQQKNESILLDNPFRWVLFP-IKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMD 65 Query: 68 EHEKHIFISNLKYQTLLDS--IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 E + +D+ + LL + +PE + E I Y Sbjct: 66 EKLLDYIEMAFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENI----YKE 121 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKR------AEGISSYYDELIEMTSYWHLLGEGTHTVN 179 + N V + I ++++K+ ++ Y+ +E + Sbjct: 122 LFMNYVEMIRKNKEKIERTDEVEKKDENNLNSKISKEEYEYNLEKKLNELEDFTKMKELV 181 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 G +K +Y ++ +I +E EL + I RDE Sbjct: 182 GNFYDEDTLFSEKLIYYVIIKKIFSSSIHLLRLSFSMRNISESELPTQLCDGLDRIRRDE 241 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 + + +++ + + +L QA EK++ + D ++ Sbjct: 242 QYQVEFCLSIAKSMKTKPSN-----------DQVVNLLEQAIMLEKNFIFSIV-DPQVLQ 289 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINT 338 + ++ + ++ + + + + F SNP I Sbjct: 290 IEREDIVAFLLFNADEILVDLKYPRQFNV-SNPFINIMN 327 >UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepID=C8WQL9_ALIAD Length = 317 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 101/310 (32%), Gaps = 37/310 (11%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKY 80 Q + R + + +L K W P ++D ++D+ D+Q + E E+ + + Sbjct: 11 QTTSEKRLNHSILPM--RLYHKAKKLGTWDPRDIDFTKDKEDWQGMNEAERRVILRLCSL 68 Query: 81 QTLLDSIQGRSPNVALLPLISI--PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVF 138 + ++ + E E ++ T+ F E H+ + + + + S + Sbjct: 69 FVAGEEAVTLDLLPLIMAVAREGRLEEEMYLTTFLFEEAKHTEVFRRFLDEVAGETSDL- 127 Query: 139 DDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCL 198 + + +Y+ L + V + + + Sbjct: 128 -------SVFHKDHYRKIFYEYLPQ----------------AMGRLVHDPSPEAQAEASV 164 Query: 199 MSVNALEAIRFYVSFACSF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 +E + + + A + + G + IRL+ RDE+ H+ ++L+ L S Sbjct: 165 TYNMVVEGVLAETGYYAFYTALQKENKLPGLIQAIRLLQRDESRHIGYGTYLLSRLISEN 224 Query: 258 D------DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI-GLNKDILCQYVE 310 + + + DL + +E + GLN D Y + Sbjct: 225 AHIWDVVNRRINLLLPHAIGVVQDLNAELDTEEAQKLAEELGITDVPFGLNPDEFVAYAQ 284 Query: 311 YITNIRMQAV 320 R+ + Sbjct: 285 KQFATRLGVL 294 >UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Brugia malayi RepID=A8PTX7_BRUMA Length = 288 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 1/133 (0%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 T + + + E + P + K+ +K L+ FW +EVD+S+D D+ Sbjct: 34 TATTTVRYESNGEILLAENPNRFVIFP-IKFHDIWDFYKKALASFWTVDEVDLSKDYRDW 92 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + L + E+H L + D I + + +PE + E IHS Y Sbjct: 93 ENLNDGERHFISRVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENIHSEMY 152 Query: 124 THIIRNIVNDPSV 136 + +I + D Sbjct: 153 SKMIDTYIRDQKQ 165 Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 28/232 (12%), Positives = 72/232 (31%), Gaps = 19/232 (8%) Query: 150 RAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRF 209 + I +Y + + + + + + R ++ + + + Sbjct: 62 KFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISRVLAFFAASDGIVNENL 121 Query: 210 YVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA------ 263 F+ E G +I E +H M++ + Sbjct: 122 VNRFSQEVQVPEARFFYGFQIMI------ENIHSEMYSKMIDTYIRDQKQKKFRKFCVTL 175 Query: 264 ---EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 EI ++ +F ++++ +IG+N ++CQY+EY+ + + + Sbjct: 176 CFLEINLSNYKKFTSMFNACIDAKQEYLTEALP-VDLIGINCKLMCQYIEYVADHLLTEL 234 Query: 321 GLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + + NP ++ + + E VS Y + S + + Sbjct: 235 HCAKIYHSD-NPFDFMERISI--EAKTNFFEKRVSEYQKAGVLSSEEGKSFN 283 >UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomycetales RepID=RIR2H_MYCTA Length = 314 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 104/314 (33%), Gaps = 37/314 (11%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 KL + FW P ++D +RDR D++ L + E+ + + Sbjct: 22 KLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSA 81 Query: 99 LISIPEL--ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISS 156 + + L E ++ +AF E H++ + + + IS Sbjct: 82 MRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVG----------------------ISE 119 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 ++ + + ++ + + + + +E + + Sbjct: 120 DLHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQ-VRASVTYNHIVEGMLALTGYYAW 178 Query: 217 FAFA-ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYD 275 ER ++ G +++R I DE H+ R A D + E E Sbjct: 179 HKICVERAILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDANWTVFETRMNELIP 236 Query: 276 LFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW 335 L ++ E+ +A L+ D L+KD +++Y T+ M+ G R P+ Sbjct: 237 LALRLI--EEGFA--LYGDQPPFDLSKDD---FLQYSTDKGMRRFG--TISNARGRPVAE 287 Query: 336 INTWLVSDNVQVAP 349 I+ ++ Sbjct: 288 IDVDYSPAQLEDTF 301 >UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0R0_9EURY Length = 296 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 91/287 (31%), Gaps = 22/287 (7%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 ++L+ + + W P +DV D+ L E L + L Sbjct: 28 KRLVRSAIEYHWDPAAIDVRADQEAVSELSRVEFTRLRGLLAQFGAGERAVTTDLAP-LA 86 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ + + ++ T + E H+ + + ++ I T + R Sbjct: 87 VVLDGSDEQRYIATQLYDEARHTELFDRYWKRVIRPEEESRGLIPTEP-MADR--WSHDD 143 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 Y EL + TS T + L + L + +E Y Sbjct: 144 YRELFDRTSNAMARLLERDTSETRARAFCHYHLTVEGILAQTAYRWVETR--YSG----- 196 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 + G R + RDE H++ + L DPE + Sbjct: 197 ELEAVPELPGLVNGFRYLRRDEGRHVSFGVTKVRKLVDKGVDPET----------IVETI 246 Query: 278 VQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 + + D + RDGS+ G +++ + ++ + R++ VG+ Sbjct: 247 DELVPLVETTIDQMVRDGSI-GADRNGILNRIDTARDRRLEQVGVVP 292 >UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theileria RepID=Q4UJ43_THEAN Length = 332 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 59/372 (15%), Positives = 127/372 (34%), Gaps = 49/372 (13%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + YT+ + +ND E + + ++D F L ++ + FW E+ + D Sbjct: 6 LPYTSILKVQND---EILLKENHNRWVMFP-IEHDTFWILYKEVENNFWAAEDFIFTDDI 61 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQ---GRSPNVALLPLISIPELETWVETWAFSET 117 LP+ + ++ L + LD+ + LL + I E + E Sbjct: 62 KLLYQLPKPIFNTLLNLLSFHINLDNKLICRPVDITLDLLSEVQIAEARAFYGFQLTDEN 121 Query: 118 IHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 IH+ + + + +F+ + + +SSY G Sbjct: 122 IHTETISSMF--------QLFNQQLDTNIVSSNTLFLSSY--------------GMDKII 159 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF-AFAERELMEGNAKIIRLIA 236 + K+ L L +M + FY S + +L+ I Sbjct: 160 WLYNECENNKCFFKRVLLLVIMK------LLFYCSINILRDYLLKEKLLPTFITAFDSIT 213 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 D +H LL++ + + E ++ QA + E + + Sbjct: 214 NDRIIHTRFAHCTFRLLQN-----------KMLESEVLEIIKQALKLEYQFI-LQYFTIQ 261 Query: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 L+ +++ Y+E+I N + G + + + I W+N ++ N+Q +++ + Sbjct: 262 FFNLSTNVIKSYLEWIGNNILLVCGYKTLYTSEFD-IDWLNHPIIDLNIQKQTNKIQKHN 320 Query: 357 YLVGQIDSEVDT 368 + I + D Sbjct: 321 ENLNDIKFDEDF 332 >UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomycetales RepID=RIR2H_RHOSR Length = 324 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 102/321 (31%), Gaps = 38/321 (11%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 +L K + FW P ++D SRD D++ L ++ + + + Sbjct: 33 RLFTKGNAKFWNPTDLDFSRDAEDWEGLNSEQQRNSTYLVAQFIAGEEAVTEDIQPFMKA 92 Query: 99 LISIPEL--ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISS 156 + + E ++ + F E H++ + + + + + + + Sbjct: 93 MAAEGRFGDEMYLTQFCFEEAKHTQVFRLWMDAVGLTRDL-------HPFVAENPYYRQL 145 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 +Y+EL V + ++ + + +E + Sbjct: 146 FYEELPGSLK----------------VLETDPSPVNQVRASVTYNHVIEGSLALTGYYAW 189 Query: 217 FAF-AERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYD 275 R ++ G +++R I DE H+ R A D + +E E Sbjct: 190 QKVCTTRGILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDSNWGVVQERMAELMP 247 Query: 276 LFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW 335 L + W + F + GL+ +++ Y + + +G R P+ Sbjct: 248 LALGMID----WVNKQF-EVQPYGLDDQ---EFIAYAADRAQRRLG--AIESARGRPVEE 297 Query: 336 INTWLVSDNVQVAPQEVEVSS 356 I+ + ++ E + + Sbjct: 298 IDLDYSPEALEEKFGEEDAKA 318 >UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae RepID=A5UUQ7_ROSS1 Length = 297 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 92/303 (30%), Gaps = 41/303 (13%) Query: 23 PVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQT 82 R D +FEK + W P ++D S+D D+Q L E+ + + Sbjct: 9 TSRGLRRDTVPMRLFEKAKRLGV---WNPSDIDFSQDVRDWQTLTADERDLVLRLTSLFQ 65 Query: 83 LLDSIQGRSPNVALLPLISIP--ELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDD 140 + + + + E E ++ ++ + E H+ + + + Sbjct: 66 AGEEAVTLDLLPLVATIAAEGRIEEELFLTSFLWEEAKHTDFFNRFLTEVTG-------- 117 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 +L + + + + L Sbjct: 118 ----------------VTGDLSHYHTSNYRALIHEALPAAMGRLRDDPSPEAQAIASLTY 161 Query: 201 VNALEAIRFYVSF-ACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 +E + + A R+LM G K I L+ +DE+ H+ ++L+ L + + Sbjct: 162 NMIVEGVLAETGYHAYFTMLERRDLMPGTRKGIGLLKQDESRHIAYGVYLLSRLIN--AE 219 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI--GLNKDILCQYVEYITNIRM 317 P + ++ + + D F ++ GL+ D + R+ Sbjct: 220 PRLWDV-------IVERMNELVVYAMGVIDDAFACYEVVPFGLSHDDFMHFAMGQFQRRL 272 Query: 318 QAV 320 + Sbjct: 273 DRI 275 >UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Corynebacterium phage P1201 RepID=A7IYE3_9CAUD Length = 237 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 92/265 (34%), Gaps = 34/265 (12%) Query: 109 VETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTS 166 ++ F E +H++SY+ + + + F + N+ Q + YD Sbjct: 1 MKQIGFMEEVHAKSYSSVFSTLFGSEDIDGAFAWVENNKATQVKKLVFDEAYDISDYNDR 60 Query: 167 YWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELME 226 G S LE+ FY F FA + + Sbjct: 61 RVEYYGAIIR----------------------ASSVLLESFLFYTGFYLPLHFASQGKLT 98 Query: 227 GNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKD 286 A +IRLI RDE +H + + + + K+ +L + E Sbjct: 99 NTADLIRLIMRDEGVHGYYLGYKFQ----KVMEGALPYERDAVKERVTNLACRLFVNEIP 154 Query: 287 WADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR-SNPIPWINTWLVSDNV 345 + ++ +GL+ + ++ Y N MQ +GL+ F + P I + L D+ Sbjct: 155 LIEEIY---EPLGLSAQ-VQTFLRYNLNKAMQNLGLENVFPAEMTRVEPRILSQLSVDSE 210 Query: 346 QV-APQEVEVSSYLVGQIDSEVDTD 369 + SSY++GQ + D D Sbjct: 211 ETHDFFSGSGSSYVIGQAEETTDDD 235 >UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subunit, putative n=1 Tax=Babesia bovis RepID=A7AR36_BABBO Length = 329 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 96/309 (31%), Gaps = 54/309 (17%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 +Q E + + YD + ++ + FW E+ + +R Y +LP + Sbjct: 17 EQHNETLLKENANRWVMFP-IHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELR 75 Query: 72 HIFISNLKYQTLLD-SIQGR--SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 + + + Y LD S R + + LL IPE + E IHS + + Sbjct: 76 QLVVKLISYHNRLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIMSS 135 Query: 129 NIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 I + + E ++ + + V L+ Sbjct: 136 AIPGTID--------VPEADAKIEWLTRNLTS-----------------TSCFYIKVILQ 170 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 + K ++ + A + + + +A+D ++HL Sbjct: 171 CISKAIFRSAFGILA-------------DYLRNSKKLPTLLSALDTVAKDVSIHLKFAMA 217 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 L L+ ++ +L A E + + M GL++ L QY Sbjct: 218 ALEHLKLRP-----------TRETVMELLNSAYDLEMAYCRSVLPMDHM-GLSEYHLSQY 265 Query: 309 VEYITNIRM 317 ++ N + Sbjct: 266 IKNNVNQCL 274 >UniRef50_D2S309 Ribonucleotide reductase beta subunit-like protein n=3 Tax=Halobacteriaceae RepID=D2S309_9EURY Length = 302 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 91/288 (31%), Gaps = 28/288 (9%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 + + W P E+D+ DR LP+ +L + L Sbjct: 20 HRYYRNAVEKHWDPHEIDLEADREGATDLPDPAFEGLKQSLALFGAGEESVTEDLAP-LA 78 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ E + ++ T + E+ H+ + R +++ +++ +K + Sbjct: 79 VVLEDIEDQLFITTQLYEESKHTDFFDRYWREVIHAEEERRGQELSSPADEK---WFNEP 135 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFA-CS 216 YDEL E + T + L +E I + + Sbjct: 136 YDELFERNERAMVQLLEEDTPKNRAKAHCHYHLT------------IEGILAQTGYYGLT 183 Query: 217 FAFAERE----LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 A+ E+E + G + ++L+ DE H+ L L + ++ + E Sbjct: 184 LAYGEQEPDLPDLPGLVEGLKLVRSDEGRHVGFGMAQLKSLVIDGE--VDPDVLRDTVDE 241 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 L + E +G G + L +Y RM+ + Sbjct: 242 LVPLVQDSLAGE---GGASTEEGP--GPSPSDLAEYAYTKHEQRMRQI 284 >UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomycetales RepID=RIR2H_MYCA1 Length = 311 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 101/314 (32%), Gaps = 38/314 (12%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 KL + FW P ++D SRDR D++ L + E+ + + + Sbjct: 22 KLFAGGNAKFWNPADIDFSRDRADWERLTDDERSYATRLCAEFIAGEESVTQDIQPFMAA 81 Query: 99 LISIPEL--ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISS 156 + + L E ++ +AF E H + + + + ++ Sbjct: 82 MRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVG----------------------VTD 119 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 ++ + + +T+ + + + + +E + + Sbjct: 120 DLHHFLDDVPSYRTIFYEELPDCLNALTIDPSPAAQ-VRASVTYNHMVEGMLALTGYFGW 178 Query: 217 FAFA-ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYD 275 ER ++ G +++R I DE H+ R A D + E E Sbjct: 179 HKICVERGILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDANWGVFETRMNELMP 236 Query: 276 LFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW 335 L ++ E+ +A Y + + +++ Y ++ M+ G R P+ Sbjct: 237 LGLRLI--EEGFALYDPMPFDL------SVDEFMAYASDKGMRRFG--TIASARGRPLAE 286 Query: 336 INTWLVSDNVQVAP 349 I+ ++ Sbjct: 287 IDLDYTPVQLEDTF 300 >UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC3_9VIRU Length = 400 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 83/253 (32%), Gaps = 34/253 (13%) Query: 30 DQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE-KHIFISNLKYQTLLDSIQ 88 +K+ L K S FW E D S DR ++ + E + I + + + DSI Sbjct: 52 PARKFKDTYDLWLKHQSCFWSVHENDPSVDRDRFETMTPKEFQEILLCTVGCIAIGDSIV 111 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 L ++ EL+ E IH + Y++++ V++ Sbjct: 112 LDRIANGLKERVTSIELKAMFSDQEAREFIHKKMYSNMLD-------------VSHRANY 158 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 R+E + Y ++E + + +G + + + + E I Sbjct: 159 YRSEEFKNEYMSVLETLADKYDIGY--------------------VQVQMFFIMMCEIIL 198 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 F F A + + L+ RDE +H + ++ D + E Sbjct: 199 FTPMFQTICYAACKGYCPKLCDLNLLVMRDEYIHYENARLQSFKFKTKLDRKFARTVLAE 258 Query: 269 CKQECYDLFVQAA 281 + LF + Sbjct: 259 FSELTLQLFAKII 271 >UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n=2 Tax=Streptococcaceae RepID=A4VCA2_9LACT Length = 317 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 98/324 (30%), Gaps = 41/324 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++ + + + E+ S FW + + D ++ L E+ L T L Sbjct: 9 RAINWNIVEDEFDNAVWERATSLFWLDTRIPIENDFTNWIKLNLEEQGQLKCLLILLTNL 68 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN--DPSVVFDDIV 142 + Q + + + F E +++++Y I+ + F+ + Sbjct: 69 STNQSIEVGEIVRNGKCSQQEVAILNNIQFIEMVNTKAYNRILLTFDKEINLEKSFEWVD 128 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 + ++ + I++ Y E L Sbjct: 129 NDSRVLEYLNDINTVYRE-------------------------------SSLIKKRFIAL 157 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 +E + Y + F + ++ +I R+E+LH H + LL +D E+ Sbjct: 158 CVEGLLNYAYLSHLFELWINKEFNNLGTMLEMIIRNESLHCFYFSHKVKLLLKESDPKEV 217 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 E K Y+ + + D + +K I + N + +GL Sbjct: 218 ----ERFKAWSYETVNHFVKLGLNIIDDFYYLKE----SKKIAKNLILQEANNILMGIGL 269 Query: 323 DLPFQTRSNPIPWINTWLVSDNVQ 346 F + IN L + Sbjct: 270 KEQFGFNDEVLKGINYRLNNLRRH 293 >UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyostelium discoideum RepID=Q54E77_DICDI Length = 257 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 92/242 (38%), Gaps = 43/242 (17%) Query: 5 TFSQTKNDQLKEPMFFGQPVNVARY------DQQKYDIFEKLIEKQLSFFWRPEEVDVSR 58 T + K L +F + +A++ ++ K+ +K L+ W EE++ S Sbjct: 49 TITDNKIYILINSIFKDNNLKMAQFIFKNFENEISPLDIWKMYKKTLANQWVVEEIESSD 108 Query: 59 DRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSET 117 D +D++ L E+ F + L + I ++ + + IPE + + + Sbjct: 109 DGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-NRFMSKVQIPEAKCFYNYQIHIKY 167 Query: 118 IHSRSYTHIIRNIVND---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEG 174 +HS +Y+ +I + D +F+ I T ++K+AE + +E E Sbjct: 168 LHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKAEWALKWINESFE----------- 216 Query: 175 THTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRL 234 L+++ A E+I F SF +R LM+G L Sbjct: 217 ---------------------KRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNEL 255 Query: 235 IA 236 I Sbjct: 256 IN 257 >UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH Length = 231 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHI 73 +EP+ P + Q Y ++ +K + FW EEVD+S+D D++ L E+H Sbjct: 6 EEPILTPTPDRFCMFPIQ-YPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHF 64 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 L + D I + + + + I E + E IHS Sbjct: 65 IKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE 112 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 53/129 (41%), Gaps = 8/129 (6%) Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + E+ + + + A + E+++ +++G+N++++ QY+E+ Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALS-CALVGMNRELMSQYIEF 161 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD---- 367 + + + A+G + NP W+ L+S + E V Y + S V Sbjct: 162 VADRLLAALGCGKVYGVT-NPFDWME--LISLQGKTNFFEKRVGEYQKASVMSSVHGNAA 218 Query: 368 TDDLSNFQL 376 +D F+L Sbjct: 219 FNDDHVFKL 227 >UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus RepID=C3MUE4_SULIM Length = 308 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 106/320 (33%), Gaps = 48/320 (15%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 ++ K F + KL + FW P +D+S+D D++ L + EK Sbjct: 6 EEYKHEYFKSIKSGGLNWSLFPM----KLYQLGKKLFWDPANIDLSKDAEDWKKLNDLEK 61 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIP--ELETWVETWAFSETIHSRSYTHIIRN 129 I+ + + ++ L+ E ++E + + E+ H ++ Sbjct: 62 MFIINVGSKFAAGEEAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAF------ 115 Query: 130 IVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRE 189 FD + E + + +S Y ++ + Sbjct: 116 -----RRFFDAVNVMEDLSTYTKDLSPNYKKIFYEELPKAMWNLS-----------RDPS 159 Query: 190 LKKKLYLCLMSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQH 248 + ++ + +E + + R+++ G AK++ LIA DE+ H+ + Sbjct: 160 PENQVRAVVTYNLIVEGVAAEGGYNIFRQITNTRKILPGLAKMVNLIATDESRHIAFGIY 219 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI-------GLN 301 ++ L +E + Y + +A +F + +M L Sbjct: 220 LITRLV------------KEYGEGVYKAAMDHINYLAPYAIGIFSEPTMPQVESLPFNLT 267 Query: 302 KDILCQYVEYITNIRMQAVG 321 L Y + + N R+ A+ Sbjct: 268 NIELVDYAKKLLNTRIDAIN 287 >UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C317CA Length = 306 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 87/285 (30%), Gaps = 21/285 (7%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 +L W +++D ++D++D+ E E+ + L + + L+ Sbjct: 38 ELYSLWERQHWAVQDLDFTQDKLDWHERFDEEERFARMYGLSAFFIGEQRVAAELGP-LM 96 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ ++ T E H + + D++ E ++++ S + Sbjct: 97 RAAPQEDMRLFLCTQIADEARHVAFFDRFYSEV---------DVLGVEGLEEKLAATSEH 147 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 + + L +L E ++ + + AL F Sbjct: 148 LNPEFGVLFDEMLKSRVDRLATEPEDLETLVEAITIYHMVIEGMLALTGQHF-----IID 202 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 + G + +ARDE H+ L + DP + E + Sbjct: 203 YNEREGTLPGFVEGFINVARDEHRHVAFGARFLRDMAR--SDPRHVAAIQRTLGEIAPVA 260 Query: 278 VQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + WA D + G++ + RM+ +GL Sbjct: 261 EGVLKP--KWAPDD-DDFEIFGISVTETRAFAFRALERRMKVIGL 302 >UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WK83_ACTMD Length = 320 Score = 124 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 93/303 (30%), Gaps = 31/303 (10%) Query: 30 DQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQ 88 D +K + L ++ + W ++D S+D +D++ + + E+ F + Sbjct: 35 DLKKLPEYIDLYKRYFTHRWNAYDLDFSQDAVDWRTKMTDVERKAFTEIAAAFHHAERQV 94 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + L E + ++ T E H+ + R +V P Sbjct: 95 EVEL-PIFM-LTGSEEAKMYLCTQLEDEARHTLFFDRFYREVVGLPG------------- 139 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 + + + G + + V K++ +E + Sbjct: 140 ---DSVEELLASSFPHVPETFVGAFGLLSYLADDLRVDPENPAKRVRYATAYFMWIEGVL 196 Query: 209 FYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + + + G RDEA H+ L S +DP + Sbjct: 197 ALTIMKLTLTYCRTKGYLPGYYTGFIASCRDEARHVQFGMRFLRD--SVQEDPRLLH--- 251 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 E ++ + + + +G +++ + ++ N ++ VG+ LP Sbjct: 252 ----EIHETLRT--ELAMNGGASVPAPLEPLGFSEEEVVHFMIRQVNNKLSDVGISLPPD 305 Query: 328 TRS 330 + Sbjct: 306 IQE 308 >UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Tortoise herpesvirus RepID=Q4VWF1_9HERP Length = 215 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 72/236 (30%), Gaps = 35/236 (14%) Query: 35 DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 + L + W +E + D D+ L + + + D + Sbjct: 11 EDLNILRNLAIKNRWAEDEFMYTDDIKDFSRLDPEALDFYRFIFTFLSAADDKVNINL-D 69 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV----FDDIVTNEQIQKR 150 L L ++ + T E +HSR+Y + + N+ + V++ I+ + Sbjct: 70 QLKQLFPQKDVHHYYATQEDIECVHSRTYAGVQLALFNNDDDARRRYIEANVSHPTIETK 129 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + +++ E + + L + +E I F Sbjct: 130 FDWLNTKIMENESVPEKYLL------------------------------MILVEGIFFV 159 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 SFA + LI+RDEA+H + + N + P I Sbjct: 160 ASFASIAYLRNHGGFNSVCRSNDLISRDEAIHTQASCCIFNNYLKDHEMPTDERIR 215 >UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q16J81_AEDAE Length = 244 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 3/103 (2%) Query: 53 EVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETW 112 EVD+S+D D++ L EKH L + D + + + E + Sbjct: 142 EVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYGFQ 201 Query: 113 AFSETIHSRSYTHIIRNIVND---PSVVFDDIVTNEQIQKRAE 152 E +HS Y+ +I + D +F+ I ++K+AE Sbjct: 202 IAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKAE 244 >UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS Length = 369 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 41/352 (11%), Positives = 99/352 (28%), Gaps = 47/352 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQ 88 + Y + + +W E + D + L + + + + D Sbjct: 39 WPP-TYAPSWHYYQLHQANYWSATEHEPLEDVSGFIKLDSQWQKAVLHSFAILAIGDDAV 97 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + + L + + ETIH Y ++ Sbjct: 98 MQFIDENDLEWEECTQW--MFKDQGARETIHKIVYNKML--------------------- 134 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 A+ S + ++ Y + + + + + +KK L+ + E Sbjct: 135 HLADHSSEFTTSMLTSKKYINYILHNNSDLKLQKYKLEDEVMKK--AAFLIKMIFCERYL 192 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD-----DPEMA 263 F F E + +I + +DE +H + L+ +D + Sbjct: 193 FATPFLVINLMGESGFLNNCVRINMQVMKDEHVHYLHAVQLFRDLKPKSDQIDEINKLFF 252 Query: 264 EIAEECKQECYDLFVQA-AQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 ++A+E + ++ ++ A E + K + + + G+ Sbjct: 253 DMAQEFVEIVENMIMKIGAGLESKY--------------KQGFLDHSRFTLHTIYSDCGI 298 Query: 323 D-LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSN 373 D P+I + + E + Y + D ++L + Sbjct: 299 DVPQSLAEYTTTPFIVFDKNTGADKFNLMESNSTVYKAVRAQYVPDWNNLQD 350 >UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae RepID=C9RTF8_GEOSY Length = 302 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 84/300 (28%), Gaps = 32/300 (10%) Query: 25 NVARYDQQKYDIFEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 ++ Y KL EK W P ++D S+D+ D+ L EK + + + Sbjct: 12 GTIDWEHPMY----KLYEKAKRNGKWNPADIDFSQDKEDFARLTSEEKIAALPLVAGFSA 67 Query: 84 LDSIQGRSPNVALLPLISIPELE--TWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDI 141 + L LE ++ T+ E H ++ + + Sbjct: 68 GEEAVTLDILPMAHALARQGRLEDVMFLTTFMHDEAKHVEMFSRWQQEVGIGA------- 120 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 +L + + + + + + Sbjct: 121 -----------------MDLSVFHNDHYKRIFYEALPEAMNRLYTDDSPEAVIRAATVYN 163 Query: 202 NALEAIRFYVSFACSFAFAER-ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 +E + ++ L G + I + DE H+ + + L + + Sbjct: 164 MIVEGTLAESGYYTFRQIYKKAGLFPGLLQGIDYLNMDEGRHIQFGLYTIQRLVNENERY 223 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 I + + + A E + ++ D+L YV NIR + + Sbjct: 224 YDLFIQYMDELWPHVVGYVAYLTELGKRQQQLARTYALEIDYDMLNNYVVKQFNIRKKQI 283 >UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187E616 Length = 184 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 2/103 (1%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHE 70 + +EP+ + Q Y ++ +K + FW EE+D+S+D D+ + ++E Sbjct: 83 PESEEPLLKESKRRFVLFPIQ-YPEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRMNDNE 141 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWA 113 +H L + D I + + E + Sbjct: 142 RHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQI 184 >UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like protein n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZF52_NATMA Length = 309 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 99/302 (32%), Gaps = 35/302 (11%) Query: 38 EKLIEKQL-SFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 +L K W P++ D+++DR D++ E E+H F++ + R+ + Sbjct: 12 YELYRKGKREGTWDPDDYDLTQDREDWEQFSEAEQHRFLATCSGFYDGEEDVTRTLAPYM 71 Query: 97 LPL---------ISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + L + E ++ + E H+ ++ + + ++ Sbjct: 72 MALDALPNDELPFDTVQEEMYLAQQVYEEAKHTDLFSRYFEEVFGTQNTAPYREGGYQEQ 131 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + D+L+ + + + E + L +E Sbjct: 132 GYSTDDLYDTADDLLAAVNSGDRTELVYSLGEAYLNYMGIVEAQLARGGYLSFDQMIE-- 189 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + ++E + I + +DE H+ + ++ L A Sbjct: 190 ------LKATQMGRDSVLESFQQAIGKVRQDETRHIENGRWVMKQL---------AIAEP 234 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD----ILCQY----VEYITNIRMQA 319 + + Y+ ++ + + +D L+ D G + D L QY ++YI R Sbjct: 235 DIVADVYEPRMEEYVENRLLSDPLYDDQPFEGYDPDRIGHQLVQYLQDTIDYIGAERFDQ 294 Query: 320 VG 321 G Sbjct: 295 YG 296 >UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, beta subunit 2 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IMN4_NATPD Length = 306 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 84/290 (28%), Gaps = 28/290 (9%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE------KHIFISNLKYQTLLDSIQGRSP 92 + + W P ++++ DR + +A + S + + Sbjct: 19 RYYRNAVERHWDPHDIELDTDRENLKAFLDSTDTPETYLDGLRSGVARFGAGEQAVTEDL 78 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L SI + + +V T + E H+ + R +++ D + + Sbjct: 79 APLATALGSIDD-QMFVTTQIYEEAKHTDFFDRYWREVIHPVE---DALGLDPSSPTDET 134 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 + Y+EL + T L + L ++ + Y + Sbjct: 135 WFNDAYEELFDRNEEAMERLLAAPTAEQFAKAYCHYHLVIEGILAQTGYYGMQ--QSYSA 192 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR--SGADDPEMAEIAEECK 270 + E + G I +DE H+ L L D + +I E Sbjct: 193 DSYP----ELPHLPGLCDGFTKIRQDEGRHVGFGMAKLKALVGDGKVDPQLLDDIVGELL 248 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 D+ D F D +G+ + L + RM+ + Sbjct: 249 PLVDDITTDV-------GDESFDD---VGIPPEELEAFAAEKHTERMEQI 288 >UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Geobacillus kaustophilus RepID=Q5QL41_GEOKA Length = 292 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 30/251 (11%) Query: 37 FEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 KL + + F W P+E+D+S D+ ++ L E + I + Sbjct: 32 AWKLYQMAIRFGTWNPQEIDLSEDKKHFKQLDEQRRAYLIHFCTGFWNAEENVALKFCPW 91 Query: 96 LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGIS 155 ++ + E + ++ T E H+ + ++ V + ++ + +RA + Sbjct: 92 IM-IAPSIEQQAFLSTQLVDEFKHTEFFIRYFAEVLQTDREVKVLNLVHDTLDERARQLL 150 Query: 156 SYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 S D+ E L G + +E I+ V + Sbjct: 151 SVLDKGPEEREIAMLEGLVHYQG------------------------VIEGIQAMVGYEV 186 Query: 216 SFA-FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECY 274 A + + L G + + I RDE H+ L +++ + +P A+ +E +E Sbjct: 187 FEAVYGQYGLFPGLKEGFKQIKRDEGRHVGYG---LRMMKYLSKNPSYAKRIKELFEEFL 243 Query: 275 DLFVQAAQQEK 285 + QE Sbjct: 244 PKILVRYDQEI 254 >UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L226_9VIRU Length = 371 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 31/246 (12%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 KQ++ W PEE+ +S+D+ + PE K I L + D+I ++ + + Sbjct: 72 YNFWLKQVALAWSPEEISLSKDKATFHRAPEQLKKISACMLGMLAIGDNIVLQNLSD-VS 130 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 +I+ + + E HS Y+ + + + V+ K I++ Sbjct: 131 EIITNNYVLNAISRQEDVEKTHSDFYSRSLDVLNDVGKSVY---------YKSEHFINNE 181 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 ++ + + L + E + F +F Sbjct: 182 LYDIQQFSKK---------------------HSTNNLNKIAFFIMICERLYFLPAFVTVA 220 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 A R + RDE LH +++ + E I E + Sbjct: 221 YLGITGYAPHTALGNRYVMRDENLHYNLWRNISANFEYKMNKQEALNILNEFEYILKCTI 280 Query: 278 VQAAQQ 283 + Sbjct: 281 KNIFKN 286 >UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S8_SULAC Length = 330 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 85/266 (31%), Gaps = 33/266 (12%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 ++ +L E F W E+D S+DR D++ L ++ Y + Sbjct: 27 LDWNTFPM----RLFEIGEKFRWTAYELDFSKDREDWKKLKPSDRTQNKIISSYFLAGEE 82 Query: 87 IQGRSPNV--ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTN 144 R + + + E ++ +A E H+ ++ ++ + Sbjct: 83 CVARDILPLANAMEELGLIEEALYLTQFARDEANHTVAFRKWFESVGETEGI-------- 134 Query: 145 EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL 204 YD + Y L E T + + + ++S N + Sbjct: 135 -------------YDFTYKNEPYRRLFYEIIPTDMRRLY---NDPSPENIVRAVVSYNFV 178 Query: 205 -EAIRFYVSFACSF--AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 E I + + G K+++LI RDEA H++ ++ L+ S D Sbjct: 179 AEGILAETGYYGYVKGYEKILPALPGLYKMVKLITRDEARHISFGAYVAALMISMHGDSV 238 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDW 287 + E Q ++ + + Sbjct: 239 LNEFNRYFGQLTQEIGFPLIEANRKI 264 >UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus RepID=Q91ES7_GVCP Length = 362 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 38/353 (10%), Positives = 81/353 (22%), Gaps = 42/353 (11%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 + + Y + + W E D + + ++ + + + Sbjct: 34 NRLKIWPP-TYTPSWNYLVEHQINHWYANEHKPMDDLNGFDKIDSAWQNALLQSFAVLAI 92 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 D + + + + A ET H Y ++ Sbjct: 93 GDDKVMDLISNSDIEWEEST--KWMFADQAARETTHKIVYNRMLELAC------------ 138 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 +S Y + + ++ + K L+L M Sbjct: 139 ----------VSRSYTVNTLTSGDFSHYIMDCRVLDEFQLPERNEVNDKVLFLSTM--IL 186 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-EM 262 E F F E + KI + +DE +H +L L+ G + E+ Sbjct: 187 CERYLFAAPFLIINLMGESGFINKCVKINMQVMKDEHVHYKHAVQLLMDLKRGVTNEVEI 246 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 E+ L L + + + + + + Sbjct: 247 NELFRGLSGAFMVLVESMV---MKICIDLTYQQKI------SVLHHTRFTLRDIFVTLQI 297 Query: 323 DLPFQTRS---NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + P P + + E + Y D L Sbjct: 298 EPPPAVVQYTITPFKVFDK--NCGEDKFNLMESTSTVYNASNSIYYPAWDVLD 348 >UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S5_SULAC Length = 345 Score = 104 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 117/342 (34%), Gaps = 54/342 (15%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVD--VSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++ Y + +L K FW P + + +D+ D++ + E E+ I + Sbjct: 25 IDWNS--YPM--RLWAKSNELFWSPLQFKELIQQDKQDWETMSESEREISEYIATAFSAG 80 Query: 85 DSIQGRSPNVALL--PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV 142 + R ++ + E ++ + ET H+ ++ + +I D + Sbjct: 81 EEAVSRYLAELVIALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDSIGMDKDT--EKWT 138 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 T I+ Y EL + G + + + + Sbjct: 139 TE---------INPSYYELFYVALPSAAYGVKANPSPESILRFT-----------ATYMF 178 Query: 203 ALEAIRFYVSFACSFAFAEREL-MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 ++E I F ER ++G +I++ +A DE+ HL ++ +L +D Sbjct: 179 SIEGIAAETGFYFWRTMWERGRHLKGIYEIVKRVAADESRHLAFGTYLTTMLI--GEDQS 236 Query: 262 MAEIAEECKQE----CYDLFVQAAQQEKD-----------WADYLFRD---GSMIGLNKD 303 + + E L +Q+ + + ++++++ GS++ Sbjct: 237 LYDKFLEYFNYAGGLAVRLIGTIVEQQVNKWEPYKEKWGRYFEWVYKENGLGSLVDYAAK 296 Query: 304 ILCQYVEYITNIRMQAVGLDLP-FQTRSNPIPWINTWLVSDN 344 ++ + Y+ R++ + + + P I + + Sbjct: 297 MVQHRLFYV--NRLRNANREKLRYMPLNEAAPVIENFDTVEK 336 >UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXC9_CATAD Length = 353 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 65/216 (30%), Gaps = 23/216 (10%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 L + S W +D++RDR + L + +S L + +S R+ AL Sbjct: 50 DLYNRWESRQWSVAGLDLARDRRRFAELRPFARREILSALAELEIGESCVTRTL-SALAD 108 Query: 99 LISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYY 158 ++ T E H R + + ++ A + Sbjct: 109 HAPDEADRLYLCTQMADEARHVRFFQSYLSDV--------------------AGIAAEQL 148 Query: 159 DELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL--EAIRFYVSFACS 216 + M + T V R ++++ + L E + Sbjct: 149 EPHGAMGGESGFGVVYDPLLTRHTAAVRTRPDDRRVWHVAVVSYHLLAEGLLAVAGLRAL 208 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 A A+ + ++ + + RDEA H+T Sbjct: 209 RALAKSCELTALSEGLANVVRDEARHVTFGLAATRR 244 >UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318F2 Length = 419 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 70/241 (29%), Gaps = 22/241 (9%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 +E L + WR E+D + D + + E+ + N + + + Sbjct: 12 YEDLYARWERGNWRATEIDFTADSEQWQERFDAFERRAALWNYSLFFHGEDAVADNLSPY 71 Query: 96 LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGIS 155 + + E + ++ T E H+ + + + +G Sbjct: 72 I-DAAPLEEQKYFLTTQQVDEARHAVFFKRFMHEVC-----------------DVGDGTM 113 Query: 156 SYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 + I+ W R K + +EA Sbjct: 114 AGGLAAIQPDLTWGFRRVFDRLDTMADELRRDRSKPKLAAALALYHLIVEATLAQSGQHF 173 Query: 216 SF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECY 274 +R+++ G +R + DE H+ +L L+ +DPE E E +E Sbjct: 174 ITGYLEQRDVLPGFYGGMRNVEFDEQRHIGFGVKLLYDLQR--EDPECKEAVAELLREVL 231 Query: 275 D 275 Sbjct: 232 P 232 >UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, beta subunit 3 n=2 Tax=Halobacteriaceae RepID=Q3INJ5_NATPD Length = 316 Score = 92.5 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 87/284 (30%), Gaps = 20/284 (7%) Query: 40 LIEKQLSFFWRP-EEVD---VSRDRI---DYQALPEHEKHIFISNLKYQTLLDSIQGRSP 92 + + W P E+++ + +DR D E E + L + Sbjct: 22 YFKHAVYNHWDPYEDIEKALIEQDRKRLIDADEFGETEFEDLMRTLALFGAGEEAVTEDL 81 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L+ ++ + +V + + E H++ + R +++ + Q+ Sbjct: 82 AP-LMLVVDDINDQMFVSSQIYEEAKHTQFFDRYWREVIHPVADARGFERRAPTDQR--- 137 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 Y +L + T + + +++ I +S Sbjct: 138 FFVDGYVDLFDRTEAAMERLLEPGEDTPTNRVRAYCHYHLTV-ESVLAQTGYWGIVSSMS 196 Query: 213 FACSFAFAERE--LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 S A E +EG K I I DE H+ + A+D + E Sbjct: 197 PRGSEALREDGMPHLEGLVKGISFIRSDEGRHVGFGMQKVQS--HLAEDGVDESVVRETL 254 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 QE L + D + ++ + L + +E IT+ Sbjct: 255 QELLPLVAETVSA----TDEVTDPEPLVEYASEKLTRRIEVITD 294 >UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Lactobacillus fermentum RepID=B2GEC7_LACF3 Length = 306 Score = 87.9 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 77/267 (28%), Gaps = 33/267 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 +D+Q+ + + K + FW V ++ D+ + AL ++ L + LL Sbjct: 7 KAINWDEQEDQVDQATWLKLTNNFWLDTRVPITDDQPSWHALTAQQQAQVGHALAGRALL 66 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTN 144 + Q +L + E + F E++H+++ T I R + + Sbjct: 67 SAFQSELGAPSLRAGRRTQQEEAVLNLITFMESVHTKAVTTIFRRLTD------------ 114 Query: 145 EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL 204 +E W + + L L++ L Sbjct: 115 --------------EETTAAYYAWADGQAPLQAALTDLTKGIEGDDLMRRGLFLIADTVL 160 Query: 205 EAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 A + ++++ LI RD + + + Sbjct: 161 CAGFDWAVLTQPALAQTNQMLKNILTGN-LIFRD------YLAYKFRQGIAELPFAKQEA 213 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYL 291 + + + L A QQ + + Sbjct: 214 LVAQLTKGAQSLIKLAHQQNEALLEDA 240 >UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=C7J3K0_ORYSJ Length = 162 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +N D++ QY+E++ + + A+G + +NP W+ L+S + E V Y Sbjct: 83 MNGDLMSQYIEFVADRLLMALGCKKMYNV-ANPFDWME--LISLQGKTNFFEKRVGDYQK 139 Query: 360 GQIDSEVD 367 + S ++ Sbjct: 140 ASVMSSLN 147 >UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K5J6_9ALVE Length = 157 Score = 84.0 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 45/95 (47%), Gaps = 4/95 (4%) Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 ++ + K E + + A E+++ G +IG+N +++ +Y+E++ + + A+ Sbjct: 19 DLRDWETLTKNEQHFIKNSAVNVEREFITDALPVG-LIGMNAELMGRYIEFVADRLLVAL 77 Query: 321 GLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 G + + +NP W+ ++S + E V Sbjct: 78 GYAKIYNS-ANPFDWMT--MISLQGKTNFFEKRVG 109 Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 23/37 (62%) Query: 41 IEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 ++ + FW EE+D+ +D D++ L ++E+H ++ Sbjct: 1 YKQHEASFWTAEEIDLGQDLRDWETLTKNEQHFIKNS 37 >UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TH71_TETNG Length = 441 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 3/69 (4%) Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQIQK 149 + + E + E IHS Y+ +I + +PS +F+ I T ++K Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKK 293 Query: 150 RAEGISSYY 158 +A+ ++ Sbjct: 294 KADWALNWI 302 >UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD87 Length = 104 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 + +++ Y + + E ++ + ++R+ + + +++Y N ++ +G + Sbjct: 3 KKMLEEKMYSILYSLMENEIEYTNVIYRESGLE----KEVVNFLKYNANRALENLGFEKL 58 Query: 326 FQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 + + NPI + L ++ + + Y G + D D Sbjct: 59 YTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQKGVYEELEDED 101 >UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42088_ARATH Length = 83 Score = 64.8 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPE 68 + + +EP+ Q + +Y ++ +K + FW EEVD+S D ++AL + Sbjct: 1 MEEGESEEPLLMAQNQRFTMFP-IRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTD 59 Query: 69 HE 70 E Sbjct: 60 SE 61 >UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=5 Tax=rosids RepID=D1II58_VITVI Length = 301 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 + +F F +R LM G LI+RDE LH + + Sbjct: 6 LFLVFNFCDIFW-KKRGLMPGLTFSNELISRDEGLHCDFACLLYKNRKPQ 54 >UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=D1VPU5_9ACTO Length = 396 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 68/277 (24%), Gaps = 67/277 (24%) Query: 40 LIEKQLSFFWRP-EEVDVSRDRI------------------DYQALPEHEKHIFISNLK- 79 L +K W +D S D + + + E+ +L Sbjct: 40 LYQKGKDKQWDAGTRIDWSLDVPYGRPLGLPDESVALFGTPVWDKMNDRERDEVRRHLAS 99 Query: 80 --YQTLLDSIQGRSP-NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 + L QG + ++ + + + + T E H Y + Sbjct: 100 WQFSQFLHGEQGAMICSARIVESVPDLDAKFYATTQTIDEARHVEVYARFL--------- 150 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 + L + K + + Sbjct: 151 ------------------------------HEKLGLVYPINDHLKALLDQTLSDSRWDIP 180 Query: 197 CLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 L +E +F + +++ + +DEA H+ + L Sbjct: 181 YLGMQVLIEG-LALAAFGVLRDLTP---LPLPKQVLAYVMQDEARHVAFGRLALRDYYRQ 236 Query: 257 ADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFR 293 D E AE E + CY L + + WA Sbjct: 237 LSDAERAEREEFAAEGCY-LMYERINGSEVWATLGLD 272 >UniRef50_B2H6U3 Conserved protein n=8 Tax=Bacteria RepID=B2H6U3_BURPS Length = 361 Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 65/244 (26%), Gaps = 28/244 (11%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGR 90 + + + + W P + D +D A +++ ++ D Sbjct: 50 KIETPKLYDIYDSARDAGWSPHTLPW--DTLDVNAFTLDQRYAIAYWFALLSVFDGSGPT 107 Query: 91 SPNVALLPLISIPE---LETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 A++ E + + E H IR + D + ++ ++ Sbjct: 108 VFARAMIHTYESKEEDPVRKCFFSVVRDEMNHEEVCGRAIRLLTPDGPLGYEPETALGKL 167 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + L G+ G V L L A + Sbjct: 168 ARNN---------------VEWLYYNGSRYWTGFNRAVDKYPLPILFTSFLFGEVA-SST 211 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 F+ + + + + R I +DE HL +L L D + I Sbjct: 212 LFHGMYQNTT-------IPVFKEAFRRIGQDEGRHLGICLTVLQKLLPQLTDQDKEMITI 264 Query: 268 ECKQ 271 + + Sbjct: 265 QLRA 268 >UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1II57_VITVI Length = 75 Score = 48.2 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 +N ++ QY++++ + + A+G + + NP W+ Sbjct: 1 MNATLMSQYIKFVADHLLVAIGYERKYNVE-NPFDWME 37 >UniRef50_UPI0001AF6C58 hypothetical protein MkanA1_14310 n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6C58 Length = 423 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 73/272 (26%), Gaps = 78/272 (28%) Query: 36 IFEKLIEKQLSFFWR-----PEEVDVSRDRIDYQALPE------------------HEK- 71 L + +S W P E+DV+ D D Q LP E+ Sbjct: 85 EMYDLYRRAVSKQWDGNADLPWELDVTPDNPDAQILPRSFVPFKEIEGFGVRLTALEERN 144 Query: 72 ---HIFISNLKYQTLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSETIHSRSYTHII 127 I L + QG A + + + + + T E H + + Sbjct: 145 LTWDIAAWLLSQFMHGE--QGALFASAQVTECVHWTDAKLYGATQVMDEGRHLEVFLRYL 202 Query: 128 RNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 + E I + D L + G G Sbjct: 203 DT--------------------KLEKIYTVNDNLFVLIDELMTDGRWDFKFLGMQ----- 237 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 +E +F F L++ ++++++ +DEA H+ Sbjct: 238 --------------IMIEG-LALGAFTTIFQQTREPLLK---QLLKMVIQDEARHVHYGV 279 Query: 248 HMLN-LLRSGADDPEMAEIAEECKQECYDLFV 278 L + + E E + Y++ + Sbjct: 280 LALRDHITQNISEKE----RREREDWVYEVAL 307 >UniRef50_C1V565 Putative uncharacterized protein n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V565_9EURY Length = 130 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 11/114 (9%), Positives = 33/114 (28%), Gaps = 4/114 (3%) Query: 56 VSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFS 115 ++ DR L + + + L + + +V + + Sbjct: 1 MAADRAAISDLGRSAFTQLRATIAMFGAGEENVTEDLVP-LAATTTNKTDQRFVASHIYE 59 Query: 116 ETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWH 169 E H+ + ++++ T+ + ++ Y+E+ T Sbjct: 60 EAKHAAFFERYWKDVIRPAEDARGLDPTDPTADR---WFTAAYEEIFNRTETAM 110 >UniRef50_A4X8S2 Putative uncharacterized protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4X8S2_SALTO Length = 321 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 91/327 (27%), Gaps = 82/327 (25%) Query: 27 ARYD-QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLD 85 +D + L E+ S W+ +VD + D + LP+ S D Sbjct: 13 LNWDYEATDPRLMALYERAKSAQWKVSDVDWTVDVPFGEPLPDD------SAFAMAAFAD 66 Query: 86 S---IQGRSPNVALLPLIS--------------------------IPELETWVETWAFSE 116 S +GR+ + + T A E Sbjct: 67 SPLAARGRAAWDDFRWEFQSWMVSQFLHGEQAAMVVAARLVAAVPDLDSKFCAATQAVDE 126 Query: 117 TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTH 176 H ++ +R + +P V Sbjct: 127 ARHVEVFSRYLREKIPEPYEV--------------------------------------- 147 Query: 177 TVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 + + + + + L +EAI SF S + L++ RL+A Sbjct: 148 SPPLRELLTDILSDSRWDVTALGMQIMVEAI-AMASFRLSNSSFHDPLIKNLT---RLVA 203 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFR--D 294 RDEA H+T L L E AE E+ E L Q W + Sbjct: 204 RDEARHVTFGVLSLRGLYGQLTTAERAER-EDLVLEAASLIRQRFLLGDIWQRLEVDRAE 262 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVG 321 G + +++ Y + + + A+G Sbjct: 263 GVSFAASHELMIMYRQAVFSRVAAALG 289 >UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacteria RepID=D2B211_STRRD Length = 371 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 71/254 (27%), Gaps = 60/254 (23%) Query: 63 YQALPEHEKHIFI-----SNLKYQTLLDSIQGRSP-NVALLPLISIPELETWVETWAFSE 116 + + ++ + QG + ++ + + + + T E Sbjct: 82 WDRMDARQRQEVRLHGAAWQFSQFLHGE--QGAMICSARIVESVPDLDSKFYAATQTMDE 139 Query: 117 TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTH 176 H+ +Y + V NE ++ Sbjct: 140 ARHAETYARFL------QEKVGLAYPINEHLK---------------------------- 165 Query: 177 TVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 + + + L +E +F + L + +I+ + Sbjct: 166 -----ALLDNTLSDSRWDMPYLGMQVLIEG-LALAAFGVMRDITTKPLPK---QILAYVM 216 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 +DEA H+ + L S + E+ E + + CY + + +E Sbjct: 217 QDEARHVAFGRMALRDYYSQLTETELREREDFVIEGCYLMRDRLRGRET---------WE 267 Query: 297 MIGLNKDILCQYVE 310 IGLN+ + + +E Sbjct: 268 TIGLNRSEVAEAME 281 >UniRef50_Q47J53 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q47J53_DECAR Length = 342 Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 86/293 (29%), Gaps = 45/293 (15%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 ++ + +++ E L W PE++ D +D + E+ ++ D+ Sbjct: 26 LSWNSKT-KKLQEVWEASLRENWDPEKLPW--DTLDVDSYTWEERESIAYWWSLLSVFDA 82 Query: 87 IQGRSPNVALLPLISIPE---LETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 AL+ + E + + E H I ++ P + + T Sbjct: 83 SAPPVFAEALIKTYEVHEEDPVRKCFFSVTRDEQNHEIMCGLAITKMLGHPDPITYEPKT 142 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 + + +R + + L G+ G V +L LM Sbjct: 143 D--LGRRLQKNVKW------------LYFNGSRYWTGYKQAVPKYDLAVLFSSFLMGE-- 186 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 I F F + + + + + I RDE H+ ++ Sbjct: 187 ---IAAATIFKQMFDNSREAVFK---EGFKNIGRDEGRHMAICMAVMER----------- 229 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIR 316 K+E + + + + + + M + ++I N R Sbjct: 230 -DYPGLKEETKAIVTKQIRAGYLFLSAVLFEPPMEFWDLPE-----DFIANQR 276 >UniRef50_Q4J6K5 Conserved protein n=13 Tax=Sulfolobaceae RepID=Q4J6K5_SULAC Length = 342 Score = 44.0 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 29/272 (10%), Positives = 72/272 (26%), Gaps = 33/272 (12%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQ------QKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 + E + F + Y+ + +L + W + +D R + Sbjct: 1 MSKENKYESINFEESPTYPEYNIYPPIWDFDNERAWQLYRRAKKEQWDEDNIDWRR-VKE 59 Query: 63 YQA-LPEHEKHIFISNLKYQTLLD--SIQGRSPNVALLPLISIPELETWVETWAFSETIH 119 + + L ++ + D + V + + T + E H Sbjct: 60 WMSGLDRKQRLAIAYWYGLLSNFDHATPVFAYAVVKSFEHHLDTAVRGILTTITWDENRH 119 Query: 120 SRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 + I+N + + + ++K+A + G+ Sbjct: 120 NLVCGLAIKNAM---EGFPLNFKPQDDLEKKAMLNVQWV------------WWNGSRYWK 164 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 L +M A + + + E +KI + A DE Sbjct: 165 AYLDAYKKYALDVLFTSFMMGEAAATTVF--------TSMGKNAKNEEFSKIFKNTAVDE 216 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 H T ++ ++ + ++ + Sbjct: 217 TRHYAFTHLIMTQNAPNMNEDRKKLVTKQIRA 248 >UniRef50_B2HNZ6 Putative uncharacterized protein n=7 Tax=Bacteria RepID=B2HNZ6_MYCMM Length = 366 Score = 42.4 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 28/298 (9%), Positives = 72/298 (24%), Gaps = 76/298 (25%) Query: 37 FEKLIEKQLSFFWRPE-EVDVSRDRI------------------DYQALPEHEK-----H 72 L +K W + +D +D + A E + H Sbjct: 37 LLSLYQKGKDKQWDAQSRIDWGQDVDPMNAIALPDEFHPLFGSPMWNAADEARRSEMRQH 96 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 + ++ ++ + + + T E H +++ ++ + Sbjct: 97 FQAWQFSQFLHGEQGAMVC-AAKIVEVVPDLDAKFYAATQTMDEARHVEAFSRFLQEKIG 155 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 + + + + Y + + + Sbjct: 156 ---------LVYPINKHLTALLDDTLRDSRWDMPYLGMQVLIEGLALAAFGVLRDMAAPE 206 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L +++ + +DEA H+ + L Sbjct: 207 SLAKQVLA---------------------------------YVMQDEARHVAFGRISLKD 233 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 S + E E E CY L + E+ + +G++ ++V+ Sbjct: 234 YYSALTEAEREEREEFVVDACY-LMRDRFRGEEVF--------ETLGMDVKACAEWVD 282 >UniRef50_A4CGF1 2-oxoglutarate dehydrogenase, E1 component n=27 Tax=cellular organisms RepID=A4CGF1_9FLAO Length = 940 Score = 42.4 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Query: 283 QEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVS 342 E+ + +F G +IG+ L + ++++T I A+G++ + + WI WL Sbjct: 117 LEESDLEKVFSAGDIIGIGPSTLREIIDHLTRIYCDAIGVEYMYIRSPERVEWIQQWLNV 176 Query: 343 DNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 ++ Y++ +++ V + Sbjct: 177 NDNHPNFSPERKK-YILRKLNEAVSFEGF 204 >UniRef50_A6GD89 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GD89_9DELT Length = 384 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 72/288 (25%), Gaps = 76/288 (26%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ----------------------ALPE 68 + +L + W +++ D + L Sbjct: 61 PADFPEMAELYTRAKQGQWNGDDLPWHTDVDPFNPEVPLLPKSFLAAGDLSQELGMLLSP 120 Query: 69 HEKH-----IFISNLKYQTLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSETIHSRS 122 E+ + L + QG A + + + + + T E H Sbjct: 121 KEQRELAYSVICWMLSQFLHGE--QGALFAAAQVTEAVQFFDGKLYGATQVMDEGRHIEV 178 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +T + + + Y N Sbjct: 179 FTRYLD-----------------------QKLGRLYQ----------------INDNLFV 199 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 + SL + L + +E +F + L+ +++R++ +DEA H Sbjct: 200 ILDSLMTDSRWDMKFLGTQIMIEG-LALGAFGVLYKVTGEPLLR---ELLRMVIQDEARH 255 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQ---AAQQEKDW 287 + L + A + E+ E L A + ++W Sbjct: 256 VHYGVLALREHFTKALSERERQEREDWAFEVALLMRNRFMAYEVYEEW 303 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit b... 335 2e-90 UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subun... 328 2e-88 UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit bet... 327 3e-88 UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 ... 311 3e-83 UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit bet... 310 7e-83 UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 ... 297 7e-79 UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornu... 289 1e-76 UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain ... 283 9e-75 UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative... 280 4e-74 UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit bet... 279 1e-73 UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit bet... 277 4e-73 UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain... 277 5e-73 UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepI... 276 1e-72 UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit bet... 275 2e-72 UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprino... 273 9e-72 UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subun... 272 1e-71 UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclass... 271 3e-71 UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 268 2e-70 UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=roo... 266 7e-70 UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit bet... 266 8e-70 UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=S... 264 4e-69 UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subuni... 263 6e-69 UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subun... 263 8e-69 UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit bet... 260 9e-68 UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=r... 259 1e-67 UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Pr... 255 2e-66 UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Ver... 255 3e-66 UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subun... 254 3e-66 UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subun... 254 4e-66 UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 253 8e-66 UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=... 253 1e-65 UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subuni... 252 1e-65 UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 T... 252 1e-65 UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Ba... 251 2e-65 UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_S... 249 1e-64 UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain ... 247 4e-64 UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=... 247 6e-64 UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 247 6e-64 UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 245 3e-63 UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain... 244 5e-63 UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Ba... 243 5e-63 UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain... 240 9e-62 UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subuni... 240 9e-62 UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 T... 238 2e-61 UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase sm... 237 5e-61 UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subuni... 237 5e-61 UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=A... 236 9e-61 UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subuni... 235 1e-60 UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subuni... 235 2e-60 UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subun... 234 5e-60 UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain ... 233 8e-60 UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase be... 233 1e-59 UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=ce... 231 2e-59 UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD 230 8e-59 UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate redu... 227 6e-58 UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta sub... 225 2e-57 UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase sm... 225 2e-57 UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit bet... 224 5e-57 UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit bet... 223 7e-57 UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain... 223 8e-57 UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib be... 223 1e-56 UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subu... 220 9e-56 UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diph... 219 2e-55 UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain... 218 2e-55 UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subun... 217 4e-55 UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chai... 217 7e-55 UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosph... 215 2e-54 UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit bet... 215 2e-54 UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subu... 215 3e-54 UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 213 6e-54 UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subun... 213 6e-54 UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystiviru... 213 9e-54 UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Dei... 212 1e-53 UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subuni... 212 2e-53 UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 211 3e-53 UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta sub... 211 4e-53 UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain ... 209 1e-52 UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Ba... 201 4e-50 UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7... 199 2e-49 UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit bet... 198 2e-49 UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subun... 194 5e-48 UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderw... 193 1e-47 UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseud... 189 2e-46 UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain ... 188 3e-46 UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), ... 187 8e-46 UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclass... 183 7e-45 UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 ... 183 1e-44 UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome s... 183 1e-44 UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain... 179 1e-43 UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderw... 176 2e-42 UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium ... 175 2e-42 UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 T... 172 2e-41 UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain... 172 2e-41 UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_... 172 3e-41 UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subun... 171 4e-41 UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Envi... 169 1e-40 UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Mar... 167 7e-40 UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib be... 164 5e-39 UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepI... 164 5e-39 UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida... 164 6e-39 UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain ... 161 5e-38 UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain... 157 5e-37 UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomy... 157 8e-37 UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomyc... 155 3e-36 UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepI... 155 3e-36 UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain ... 151 3e-35 UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, s... 151 5e-35 UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative ... 150 6e-35 UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomy... 150 1e-34 UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae... 149 2e-34 UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena t... 147 4e-34 UniRef50_D2S309 Ribonucleotide reductase beta subunit-like prote... 145 2e-33 UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Bru... 144 4e-33 UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theil... 143 1e-32 UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=C... 142 2e-32 UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae Rep... 141 4e-32 UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS 140 1e-31 UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus Rep... 137 5e-31 UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Coryne... 136 1e-30 UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n... 134 5e-30 UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexiba... 132 2e-29 UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subuni... 131 3e-29 UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, b... 129 1e-28 UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyos... 129 2e-28 UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC... 128 4e-28 UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema m... 127 4e-28 UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH 125 3e-27 UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, b... 124 6e-27 UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus... 124 7e-27 UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment... 122 2e-26 UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Ge... 122 3e-26 UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like prote... 121 4e-26 UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolo... 121 4e-26 UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Su... 119 1e-25 UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Con... 116 1e-24 UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes a... 115 2e-24 UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=M... 115 2e-24 UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=G... 111 4e-23 UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenul... 109 2e-22 UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subuni... 107 6e-22 UniRef50_A4X8S2 Putative uncharacterized protein n=1 Tax=Salinis... 99 3e-19 UniRef50_B2H6U3 Conserved protein n=8 Tax=Bacteria RepID=B2H6U3_... 93 2e-17 UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia... 91 7e-17 UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome s... 80 2e-13 UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sa... 79 2e-13 UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain... 78 5e-13 UniRef50_UPI0001AF6C58 hypothetical protein MkanA1_14310 n=1 Tax... 78 6e-13 UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 T... 72 4e-11 UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment... 64 6e-09 UniRef50_C1V565 Putative uncharacterized protein n=1 Tax=Halogeo... 58 4e-07 UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, s... 56 2e-06 Sequences not found previously or not previously below threshold: UniRef50_Q2J7V6 Putative uncharacterized protein n=1 Tax=Frankia... 75 5e-12 UniRef50_B4R8K9 Ribonucleoside-diphosphate reductase beta chain ... 70 1e-10 UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacter... 67 8e-10 UniRef50_A9G4H5 Putative uncharacterized protein n=1 Tax=Sorangi... 67 1e-09 UniRef50_A6GD89 Putative uncharacterized protein n=1 Tax=Plesioc... 66 2e-09 UniRef50_C7Q987 Putative uncharacterized protein n=1 Tax=Catenul... 65 4e-09 UniRef50_B2HNZ6 Putative uncharacterized protein n=7 Tax=Bacteri... 64 1e-08 UniRef50_Q47J53 Putative uncharacterized protein n=3 Tax=Proteob... 61 1e-07 UniRef50_D0LTN7 Putative uncharacterized protein n=1 Tax=Haliang... 57 8e-07 UniRef50_B4EPX9 Putative uncharacterized protein n=30 Tax=Burkho... 56 2e-06 UniRef50_C5CMN9 Putative uncharacterized protein n=1 Tax=Variovo... 55 4e-06 UniRef50_Q4J6K5 Conserved protein n=13 Tax=Sulfolobaceae RepID=Q... 55 4e-06 UniRef50_A9C0R4 Putative uncharacterized protein n=1 Tax=Delftia... 54 1e-05 UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, s... 45 0.006 UniRef50_C6WBU0 Putative uncharacterized protein n=1 Tax=Actinos... 44 0.008 UniRef50_Q970H5 Putative uncharacterized protein ST1620 n=1 Tax=... 44 0.013 UniRef50_B6BHF4 Putative uncharacterized protein n=1 Tax=Campylo... 43 0.014 UniRef50_Q7NUN8 Probable phenylacetic acid degradation protein p... 42 0.027 >UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit beta n=294 Tax=root RepID=RIR2_ECO57 Length = 376 Score = 335 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 376/376 (100%), Positives = 376/376 (100%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR Sbjct: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS Sbjct: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG Sbjct: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA Sbjct: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL Sbjct: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDSEVDTDDLSNFQL Sbjct: 361 QIDSEVDTDDLSNFQL 376 >UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subunit n=2 Tax=Eukaryota RepID=A8IKH1_CHLRE Length = 493 Score = 328 bits (840), Expect = 2e-88, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 134/363 (36%), Gaps = 49/363 (13%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHI 73 L E + P + KY + ++ ++ FW EEVD + D ID+ L E+ Sbjct: 165 LDEDLLRENPNRFTLF-PIKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRF 223 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 L + D I + + I +PE + E +HS Y+ ++ + V + Sbjct: 224 IKYVLAFFAASDGIVMENLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVRE 283 Query: 134 PSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 P +FD I T + K+AE + Sbjct: 284 PEERNQLFDAIHTIPTVAKKAEWAMRWI------------------------------SS 313 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 L+ +E I F SF F +R LM G + LI+RDE LH + Sbjct: 314 SNVFAERLVGFACVEGIHFSGSFCSIFWLKKRCLMPGLSFSNVLISRDEGLHCDFACCLY 373 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + L++ ++ + +A Q E ++ ++G+N D++ QY+ Sbjct: 374 SHLKNRLS-----------RERVLQIVDEAVQLEDEFCTEALS-CELLGMNADLMRQYIR 421 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 ++ + + ++G + + TR NP W+ ++S + E V Y + + + Sbjct: 422 FVADRLLVSLGYEKHYNTR-NPFDWME--MISLQGKANFFERRVGEYQRAGVMGGNNGNS 478 Query: 371 LSN 373 + Sbjct: 479 ARD 481 >UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit beta n=58 Tax=root RepID=RIR2_HAEIN Length = 376 Score = 327 bits (839), Expect = 3e-88, Method: Composition-based stats. Identities = 321/376 (85%), Positives = 346/376 (92%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQ KNDQLKEPMFFGQ VNVARYDQQKY+ FEKLIEKQLSFFWRPEEVDVS+DR Sbjct: 1 MAYTTFSQNKNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDY ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPL+SIPELETW+ETW FSETIHS Sbjct: 61 IDYAALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPS+VFDDIVTNE+I KRA+ ISSYYD+LI + + L GEGT+TV+G Sbjct: 121 RSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYGLYGEGTYTVDG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K V+LR LKK+LYLCLMSVNALEAIRFYVSFACSFAFAER LMEGNAKII+ IARDEA Sbjct: 181 KECVVTLRSLKKQLYLCLMSVNALEAIRFYVSFACSFAFAERRLMEGNAKIIKFIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQH+LN++ +G DDPEMAEIAEECKQE YDLFV AA+QEK WADYLF+DGSMIGL Sbjct: 241 LHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N+DIL QYVEYITNIRMQAVGL LPFQTRSNPIPWIN WLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDS+VDT+D +F L Sbjct: 361 QIDSKVDTNDFDDFSL 376 >UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 n=93 Tax=root RepID=RIR2_HUMAN Length = 389 Score = 311 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 133/362 (36%), Gaps = 48/362 (13%) Query: 13 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKH 72 EP+ P + +Y ++ +K + FW EEVD+S+D +++L E++ Sbjct: 67 VEDEPLLRENPRRFVIF-PIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERY 125 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 L + D I + + I E + E IHS Y+ +I + Sbjct: 126 FISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIK 185 Query: 133 DPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRE 189 DP +F+ I T ++K+A+ + + Sbjct: 186 DPKEREFLFNAIETMPCVKKKADWALRWIGD----------------------------- 216 Query: 190 LKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHM 249 + +++ A+E I F SFA F +R LM G LI+RDE LH M Sbjct: 217 KEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLM 276 Query: 250 LNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYV 309 L + + ++ + A + E+++ +IG+N ++ QY+ Sbjct: 277 FKHLVHKPSE-----------ERVREIIINAVRIEQEFLTEALP-VKLIGMNCTLMKQYI 324 Query: 310 EYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 E++ + M +G F+ NP ++ +S + E V Y + S + Sbjct: 325 EFVADRLMLELGFSKVFRVE-NPFDFMEN--ISLEGKTNFFEKRVGEYQRMGVMSSPTEN 381 Query: 370 DL 371 Sbjct: 382 SF 383 >UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit beta n=48 Tax=root RepID=RIR2_BUCBP Length = 376 Score = 310 bits (793), Expect = 7e-83, Method: Composition-based stats. Identities = 275/376 (73%), Positives = 333/376 (88%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M YTTFS+ KN+QL EPMFFGQ VN++RYDQQKY+IFEKLIEKQLSFFWRPEEVD+SRD Sbjct: 1 MTYTTFSKNKNNQLYEPMFFGQSVNISRYDQQKYEIFEKLIEKQLSFFWRPEEVDLSRDY 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 ID+Q LP+HEKHIF+SNLKYQTLLDSIQGRSPN+ALLP++S+PELETW+ETW+FSETIHS Sbjct: 61 IDFQNLPQHEKHIFVSNLKYQTLLDSIQGRSPNIALLPIVSLPELETWIETWSFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNI+N PS++FDDI+ N+ I RA+ I+ YYD+LIE+TSYWHL GEG HT+NG Sbjct: 121 RSYTHIIRNIINTPSLIFDDIIDNKNIANRAKDIAKYYDDLIELTSYWHLFGEGKHTING 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K + + L ELKKKLYLCL+SVNALEAIRFYVSFACSFAFAERE MEGNAKIIRLIARDEA Sbjct: 181 KKIKIDLHELKKKLYLCLISVNALEAIRFYVSFACSFAFAEREKMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLT TQH+LN+L + ++ M++I++EC +ECY LF++ + QEK WA YLF++GSM+GL Sbjct: 241 LHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGSMLGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N++IL QY+EYITNIRM+A+GL PF+ SNPIPWIN+WL+SDNVQVAPQE+ VSSYL+G Sbjct: 301 NQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWINSWLISDNVQVAPQEISVSSYLIG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QI+SE++ D F+L Sbjct: 361 QINSEINDSDFEKFKL 376 >UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 B n=134 Tax=root RepID=RIR2B_HUMAN Length = 351 Score = 297 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 74/373 (19%), Positives = 142/373 (38%), Gaps = 48/373 (12%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 + + ++++ +EP+ + +Y K+ ++ + FW EEVD+S+D Sbjct: 18 SSSDTNESEIKSNEEPLLRKSSRRFVIF-PIQYPDIWKMYKQAQASFWTAEEVDLSKDLP 76 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 + L EK+ L + D I + + +PE + E +HS Sbjct: 77 HWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSE 136 Query: 122 SYTHIIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 Y+ +I + DP +F+ I T ++K+A+ + + Sbjct: 137 MYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIAD------------------ 178 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 K +++ A+E + F SFA F +R LM G LI+RD Sbjct: 179 -----------RKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRD 227 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E LH M L + + + ++ V A + E+++ G +I Sbjct: 228 EGLHCDFACLMFQYLVNKPSE-----------ERVREIIVDAVKIEQEFLTEALPVG-LI 275 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 G+N ++ QY+E++ + + +G FQ NP ++ +S + E VS Y Sbjct: 276 GMNCILMKQYIEFVADRLLVELGFSKVFQAE-NPFDFMEN--ISLEGKTNFFEKRVSEYQ 332 Query: 359 VGQIDSEVDTDDL 371 + +E + Sbjct: 333 RFAVMAETTDNVF 345 >UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPK4_PHATR Length = 409 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 67/353 (18%), Positives = 133/353 (37%), Gaps = 50/353 (14%) Query: 21 GQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLK 79 + + ++D + ++ ++ FW +E+D+S D D+ L ++E+H L Sbjct: 89 DSGSRFSLF-PIEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLA 147 Query: 80 YQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--- 136 + D I + +++PE + E IH +Y +I + ++DP Sbjct: 148 FFAGADGIVVENLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREM 207 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 +F ++K+A Y Sbjct: 208 LFAAHTKVPSVEKKARWAQRYIGS------------------------------DASFAE 237 Query: 197 CLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 L++ A+E I F +F F +R LM G LI+RDE LH + + + L Sbjct: 238 RLVAFAAVEGIFFSGAFCSIFWLKKRGLMPGLTFSNELISRDEGLHCSFACQLYSKLERK 297 Query: 257 ADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIR 316 + + + L +A + EK + G +IG+N ++ QYVE++ + Sbjct: 298 LSE-----------TDMHKLIGEAVEVEKGFVCDALPVG-LIGMNASLMSQYVEFVADRL 345 Query: 317 MQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 + +G + ++ NP W++ ++S + E V Y + + + D Sbjct: 346 LHDLGYRTLYGSK-NPFDWMD--MISLEGKTNFFEKRVGEYQKSGVMASLSDD 395 >UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain n=43 Tax=Bacteria RepID=B4E5V8_BURCJ Length = 403 Score = 283 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 81/359 (22%), Positives = 150/359 (41%), Gaps = 26/359 (7%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA- 65 ++ + + + + GQ +V + KY + + W P+E+++SRD ++ Sbjct: 64 TEARVNVADKRIINGQ-TDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDP 122 Query: 66 --LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 L E E+ I NL + DS+ + + I+ PE ++ AF E IH+ +Y Sbjct: 123 NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 182 Query: 124 THIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 +I+ ++ D +F+ I+ + E + + L + Sbjct: 183 QYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTG-------------- 228 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 +L +K L ++ +E + FYV F A + M G A+ + I RDE++H Sbjct: 229 --TLEADQKLLKSLIVFACIMEGLFFYVGFTQILALGRQNKMTGAAEQYQYILRDESMHC 286 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 ++N ++ E + E +LF QA + E +A+ G ++GLN Sbjct: 287 NFGIDLINQIKLENP----HLWTAEFRAEIRELFKQAVELEYRYAEDTMPRG-VLGLNAS 341 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + Y+ +I+N R Q +GLD F NP PW++ ++ + E V Y G Sbjct: 342 MFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSE-MIDLKKERNFFETRVIEYQTGGA 399 >UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative n=11 Tax=root RepID=Q5K9L8_CRYNE Length = 430 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 127/350 (36%), Gaps = 50/350 (14%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFIS 76 + + KY+ + + + FW EE+D D ID+ + E E+ + Sbjct: 102 ILRESESRFVLF-PIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQERFFILR 160 Query: 77 NLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 L + D I G + + I E + + E +HS +Y+ +I V D Sbjct: 161 ILAFFAASDGIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQE 220 Query: 137 ---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 +F + I+++A+ Y + + Sbjct: 221 KDFLFRGMTNIPCIKQKADWALKYITDELP------------------------------ 250 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLL 253 L++ +E I F SFA F +R LM G LI+RDE +H + N L Sbjct: 251 FRTRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLYNHL 310 Query: 254 RSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYIT 313 + E + + +A EK + ++IG+N ++CQY+E++ Sbjct: 311 KHRCS-----------TDEVHHIVSEALVIEKQFLTDALP-CALIGINAHLMCQYMEFVA 358 Query: 314 NIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + +G + NP W+ L+S + E VS+Y + Sbjct: 359 DRLVVDLGYPKIYNAT-NPFDWME--LISLQGKANFFESRVSAYQKANVS 405 >UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit beta n=80 Tax=Bacteria RepID=RIR2_TREPA Length = 351 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 78/367 (21%), Positives = 149/367 (40%), Gaps = 36/367 (9%) Query: 5 TFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F++ + + K M G N+ ++ KY K + ++ FW PEE+++S D DY Sbjct: 13 LFNEAGDIELHKRRMVGGNTTNLNDFNNMKYPWVSKWYRQAMNNFWIPEEINMSSDVQDY 72 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + L EK + L + LDSIQ + + I+ E+ + AF E +HS+SY Sbjct: 73 RNLSAIEKTAYDKILSFLIFLDSIQTANL-PNIGQYITANEINLCLTIQAFQEAVHSQSY 131 Query: 124 THIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 ++++ I + + +E + R + I + Y+E + S Sbjct: 132 SYMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFQDDKSVLA------------ 179 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 L ++ LE I FY F + M G+ + IR I RDE Sbjct: 180 ------------LLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENT 227 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL + + E + D+ + +QE W DY+ D + GLN Sbjct: 228 HL----WLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGD-QIPGLN 282 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 + ++ Y+ Y+ N+R + +G + ++ + W++ + ++ ++ E + ++Y Sbjct: 283 RHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYA 342 Query: 359 VGQIDSE 365 + Sbjct: 343 KSSAMVD 349 >UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Epsilonproteobacteria RepID=RIR2_HELPJ Length = 341 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 81/370 (21%), Positives = 160/370 (43%), Gaps = 35/370 (9%) Query: 3 YTTFSQTK-NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 ++ + +F G P ++ ++ KY + L + L+ W EEV ++ D+ Sbjct: 6 KKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKR 65 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY L EK + L +DS+Q + + P I+ PE+ + A+ E +HS Sbjct: 66 DYLKLSAEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSH 125 Query: 122 SYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 +Y ++ +I + ++D + Q++ + + I+ Y EL + + Sbjct: 126 AYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPT--------------- 170 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 ++ + L + LE I FY F+ + A M G+A++IR I RDE Sbjct: 171 ---------EENILKALFANQILEGIYFYSGFSYFYTLARSGKMLGSAQMIRFIQRDEVT 221 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL + + + + + E ++F +A + E W DY+ + G ++GL Sbjct: 222 HL----ILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQ-GKILGLT 276 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ QY++++ + R+ VG+ + + PI W+ ++ + + E VS+Y G Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGVQH-PIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 362 IDSEVDTDDL 371 + DD Sbjct: 336 V----SFDDF 341 >UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain 1 n=151 Tax=root RepID=RIR2_YEAST Length = 399 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 138/361 (38%), Gaps = 49/361 (13%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-L 66 + K + +EP+ + KY + ++ + FW EE+D+S+D D+ + Sbjct: 68 KLKEMEKEEPLLNEDKERTVLF-PIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRM 126 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 E+E+ L + D I + + IPE +++ E IHS +Y+ + Sbjct: 127 NENERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLL 186 Query: 127 IRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 I + DP +F+ I T +I ++AE + + Sbjct: 187 IDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQD----------------------- 223 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 L++ ++E + F SFA F +R +M G LI RDE LH Sbjct: 224 ------ADALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHT 277 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 + L++ D + +A + E+ + +++G+N D Sbjct: 278 DFACLLFAHLKNKPDP-----------AIVEKIVTEAVEIEQRYFLDALP-VALLGMNAD 325 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 ++ QYVE++ + + A G ++ NP ++ +S + E VS Y + Sbjct: 326 LMNQYVEFVADRLLVAFGNKKYYKVE-NPFDFMEN--ISLAGKTNFFEKRVSDYQKAGVM 382 Query: 364 S 364 S Sbjct: 383 S 383 >UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepID=D1BPH6_VEIPT Length = 342 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 91/375 (24%), Positives = 167/375 (44%), Gaps = 36/375 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M D+ + M G N+ +++ KYD ++ L+ FW PEE+ ++ D Sbjct: 1 MDKKLIFNENGDRGTQSMIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDV 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L ++E+ F + + LDSIQ + L I+ E+ + + AF E IH+ Sbjct: 61 KQFPYLTDYERRAFDKIIAFLNFLDSIQSENL-PNLSRYITASEVASLLNIQAFQEEIHA 119 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++I+ + N ++D+ T++ + +R I+ Y + S Sbjct: 120 QSYSYILDTVTNPITRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEA---------- 169 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 L +++ LE I FY F+ + A + M + I + I RD Sbjct: 170 --------------NLIHTIIANYILEGIYFYSGFSFFYTLARQGKMTATSTIFKYINRD 215 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E HL Q+++ LR D E + + D+ Q A+ E W Y+ D ++ Sbjct: 216 EVTHLVLFQNIIRELRRERPD----LFTPELEAKITDMIRQGAENEIAWGQYITDD-KIL 270 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSY 357 GLN ++ +Y++Y+ NIR++A+GL + + NP+ WI ++ ++ + E +V++Y Sbjct: 271 GLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNY 330 Query: 358 LVGQIDSEVDTDDLS 372 D DDL Sbjct: 331 TKAAA---FDFDDLE 342 >UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit beta n=4 Tax=Campylobacterales RepID=C3XIX4_9HELI Length = 351 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 85/361 (23%), Positives = 164/361 (45%), Gaps = 30/361 (8%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + + +F G P + ++ KY L+ + W PEEV++++D+ DY L Sbjct: 21 HSTESVNERRIFGGNPTAIFELNKIKYQWAYNLLRTMFANTWFPEEVNMNQDKRDYMELT 80 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 EK + L +DS+Q + + P I+ PE+ + AF E++H++SY ++ Sbjct: 81 LQEKQGYDRALAQLIFMDSLQTNNLTDNINPYITCPEINMLLVRQAFEESLHAQSYAVMV 140 Query: 128 RNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 +I + ++ +++++ + + I+ Y +L + + Sbjct: 141 DSISANTDEIYQMWRKDDKLRSKNDYIADVYTDLAKNPT--------------------- 179 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 + L + + LE I FY FA + A M+ +A++IR I RDE HLT Sbjct: 180 ---ETNLIKAMFANQILEGIYFYSGFAFFYTLARSGKMQNSAEMIRFIQRDEITHLT--- 233 Query: 248 HMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQ 307 + + + + E ++F QA E W +Y+ + G ++GL I+ Q Sbjct: 234 -IFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWGEYITQ-GQILGLTAKIIRQ 291 Query: 308 YVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 Y+EY+ + R++AV + + T+ NPI W++ + +N + E +V +Y G++ E D Sbjct: 292 YIEYLADKRLKAVDYPILYNTQ-NPIQWVDEQVNFNNQRTNFFEAKVRNYTRGELKFEDD 350 Query: 368 T 368 Sbjct: 351 F 351 >UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NX45_COPC7 Length = 386 Score = 273 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 119/352 (33%), Gaps = 70/352 (19%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + Y +Y ++ + FW EE+D+S D +D+ L E+H Sbjct: 32 EEPLLKPSPKRLTLY-PIQYPEIWTHYKRAQASFWTAEEIDLSHDMMDWSKLTNAERHFL 90 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + +PE + E +HS +Y+ +I + DP Sbjct: 91 SRILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDP 150 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 +F I T IQ++AE ++ + Sbjct: 151 EERDFLFRAIETIPSIQRKAEWALTW-----------------------------TSDKS 181 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 L++ +E + F SFA F +R L+ G LI+RDE +H + Sbjct: 182 TTFAERLVAFAVVEGVFFSGSFAAIFWMRKRGLLPGLTFSNELISRDEGMHTDFACLLFA 241 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 LR + +A + EK++ + Sbjct: 242 YLRKRP-----------HSDTILAIVTEAVEIEKEF-----------------------F 267 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + ++G D + NP ++ L+S + E VS Y + Sbjct: 268 SADRLLTSLGNDKHYHVD-NPFDFME--LISMEGKANFFEKRVSDYAKANVS 316 >UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Firmicutes RepID=C9LBQ7_RUMHA Length = 359 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 79/366 (21%), Positives = 155/366 (42%), Gaps = 36/366 (9%) Query: 3 YTTFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 F+ + + D M G N+ ++ +Y + + ++ FW PEE+++S+DR Sbjct: 19 KPLFNPSGDTDVRFRRMIGGNTTNLNDFNNMRYGWVKGWYRQAMNNFWIPEEINLSQDRK 78 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY L E+ + L + LDSIQ + + I+ E+ + F E +HS+ Sbjct: 79 DYGELLGKERQAYDKILSFLVFLDSIQSANL-PCIGEYITANEINLCLSIQTFQECVHSQ 137 Query: 122 SYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 SY++++ I + + T+E++ KR I Y+E + Sbjct: 138 SYSYMLDTICSPEKRNEILYQWKTDERLLKRNTFIGELYNEFQMKKDSF----------- 186 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 L +M+ LE I FY F + + M G+A+ IR I RDE Sbjct: 187 -------------TLLKVMMANYILEGIYFYSGFMFFYNLSRNGKMPGSAQEIRYINRDE 233 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 HL + + + E +E Q ++ ++ +QE W Y+ D + G Sbjct: 234 NTHL----WLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGD-DIPG 288 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQT---RSNPIPWINTWLVSDNVQVAPQEVEVSS 356 ++K+++ +Y++Y+ N+R +G D+ + + W++ + ++ V+ E + ++ Sbjct: 289 ISKEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTA 348 Query: 357 YLVGQI 362 Y Sbjct: 349 YAKSTA 354 >UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclassified Phycodnaviridae RepID=C7U0I3_9PHYC Length = 389 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 75/366 (20%), Positives = 141/366 (38%), Gaps = 50/366 (13%) Query: 11 NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 ++ EP+ + KY +L +K W EEVD+S+D D++ L E+E Sbjct: 69 VEEEYEPILASTLNRFTVF-PLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENE 127 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 + L + D I + N + I E ++ +E +H +Y+ +I Sbjct: 128 QKFIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKY 187 Query: 131 VNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 + DP +F+ I T I+K+A+ ++D Sbjct: 188 IKDPSEKKELFEAIQTVPCIEKKAQWAMKWFD---------------------------- 219 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 + L + +E I F SF F +R LM G LI+RDE LH Sbjct: 220 -TKSRSFAERLFAFACVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHQEFAV 278 Query: 248 HMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQ 307 + LR+ + + +A EK + ++IG+N + + + Sbjct: 279 ELFKTLRNRPG-----------VDTIHAIVREAVDIEKGFILDALP-CNLIGMNSEKMSE 326 Query: 308 YVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 Y+EY+++ ++ +G+ + ++ NP ++ +S + + E V Y G++D + D Sbjct: 327 YIEYVSDRLLKQIGVPTIWNSK-NPFDFMEN--ISLDGKTNFFEKRVGDY--GKLDDDTD 381 Query: 368 TDDLSN 373 Sbjct: 382 EIGFDE 387 >UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C8WWZ0_ALIAD Length = 369 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 77/367 (20%), Positives = 165/367 (44%), Gaps = 36/367 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + D K + G N+ + KY+ KL ++ FW PEE+ ++ D Y L Sbjct: 36 EGDRDWGKRRIIGGNTTNMIELNNIKYEWAYKLYRAMMNNFWIPEEIPLADDARQYDLLS 95 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + E+ + L + +DS+ + + I+ PE+ + AF E +HS+SY +++ Sbjct: 96 DDERRSYNKVLSFLIFMDSLLTHNL-PNINEYITAPEVNLCLTVHAFQEAVHSQSYGYVL 154 Query: 128 RNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 ++VN ++++ ++ + +R + I+ ++E IE + Sbjct: 155 DSVVNPATRDQIYNEWRNDDHLLRRNQFITDLFEEFIENPT------------------- 195 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + L +++ LE + FY F F + M G I+ I RDE HL Sbjct: 196 -----DRNLMKTIVANYILEGVYFYAGFGFFFVLGRQGKMLGTVSEIKFIQRDELTHLAI 250 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 +++ + + + + ++E ++ A Q E W Y+ + G ++GL ++ Sbjct: 251 FRNLYHEIIRENP----GIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQ-GKIVGLTDALI 305 Query: 306 CQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDS 364 Y++Y+ N+R+Q++ L + + + +P+PW++++ ++ + E V++Y Sbjct: 306 DAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA---G 362 Query: 365 EVDTDDL 371 ++ DDL Sbjct: 363 NLNWDDL 369 >UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=root RepID=C4L4U4_EXISA Length = 346 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 79/376 (21%), Positives = 156/376 (41%), Gaps = 37/376 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + K+ + G+ ++ ++ Y F + ++ LS FW P+E+ +S+D Sbjct: 3 IQKIKLLSPKHPNRATAIIGGETSSIVNWNDIAYPQFYTIYKQLLSNFWIPDEISMSKDM 62 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E E+ F + ++LDS+Q R + + + + A E +H+ Sbjct: 63 QQWPQLTEREQDAFKRIIGLLSILDSVQTRYILESSMFSSDSS-VHAVLAVIAQQEVVHN 121 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ ++V + + +F+ +E + KR + I Y+ E + Sbjct: 122 QSYSYVLSSLVPLAEQNRIFNIAKDDEMVMKRNQFILDLYEAFRETPNA----------- 170 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++ LE I FY FA + A + M G + +I I RD Sbjct: 171 -------------ENFAKSLVASVILEGINFYSGFAYFYNLARHQKMVGTSTMISYIQRD 217 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H +L + + + + Q YD +A E +W +Y+ RD + Sbjct: 218 EMQHSYFISQLLRAVLTENPK---IDENGQFSQFVYDTMAEAVDLEIEWCEYVLRD--LD 272 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQT-RSNPIPWINTWLVS--DNVQVAPQEVEVS 355 GL+ + YV+Y+ N R++ +GL+ ++ + +PWI + + + E + Sbjct: 273 GLDVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSDFFEQKSR 332 Query: 356 SYLVGQIDSEVDTDDL 371 SY + DDL Sbjct: 333 SYAK--VTDANGFDDL 346 >UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit beta n=182 Tax=cellular organisms RepID=RIR2_CHLTR Length = 346 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 68/357 (19%), Positives = 147/357 (41%), Gaps = 27/357 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-- 65 Q + + + + V+V + KY + + W P E+ + +D +++ Sbjct: 10 QKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDR 69 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L E E+ + + NL + + +S+ G + +A+ ++ PE ++ AF E +H+ ++ + Sbjct: 70 LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLY 129 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 I ++ D +F+ I+ + + ++++ Sbjct: 130 ICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDP-----------------NFRT 172 Query: 186 SLRELKKKLYLCLMSVNAL-EAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 E ++ L+ + E I FY F +F + M G + + I RDE +HL Sbjct: 173 DSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLN 232 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 ++N ++ + E +QE +L +A E ++A G ++GL + Sbjct: 233 FGIDLINGIKEENPE----IWTPELQQEIVELIKRAVDLEIEYAQDCLPRG-ILGLRASM 287 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 YV++I + R++ +GL + T+ NP PW++ + + + E V Y Sbjct: 288 FIDYVQHIADRRLERIGLKPIYHTK-NPFPWMSETIDLNKEK-NFFETRVIEYQHAA 342 >UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=Shrimp white spot syndrome virus RepID=Q9INE3_WSSV Length = 413 Score = 264 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 67/368 (18%), Positives = 141/368 (38%), Gaps = 48/368 (13%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 +T + D K + P ++ ++ +K+++ FW EE+D RD D Sbjct: 44 FTKKLIMQVDTFKHLLTRENPNRFVSRPIV-HEDLWEMYKKEVACFWTLEEIDFERDPKD 102 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 ++ L + EK + L + D I + L + IPE ++ + E+IH Sbjct: 103 WEKLTQDEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNV 162 Query: 123 YTHIIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 Y +I +V D +F+ I+K+ + ++ + Sbjct: 163 YGELIDRLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQSNND---------------- 206 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 L +++ A+E I F +FA F R ++ G I+RDE Sbjct: 207 --------------LAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGLTSSNEFISRDE 252 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 LH +L ++ ++ +A + E+++ ++G Sbjct: 253 GLHRDFACMLLKKGFVDTP----------SRERILEIVTEAVRIEQEFLTVSLP-VKLVG 301 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +N ++ QY+E++ + + +GL+ + NP P+++ +S + E V+ Y Sbjct: 302 MNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN--ISLENKTNFFEKRVAEYQR 358 Query: 360 GQIDSEVD 367 Q+ + ++ Sbjct: 359 AQVMASIN 366 >UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67SN7_SYMTH Length = 346 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 90/372 (24%), Positives = 157/372 (42%), Gaps = 36/372 (9%) Query: 3 YTTFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 F++ D K + G P N+ KY+ +KL + L FW PEEV + D Sbjct: 8 KRLFNEHGERDWGKRRIIGGNPTNIMELTNVKYEWAQKLSDIMLRNFWIPEEVPLLDDAK 67 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 Y L E+ + L + +DSI S L+ ++ PE+ + F E +HS+ Sbjct: 68 QYLELTADEQWAYDRMLSFVIFMDSILTVS-MPNLINYVTAPEINMCLSIHNFHEALHSK 126 Query: 122 SYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 SY +++ ++V ++D + Q+ +R I++ + + + Sbjct: 127 SYGYVLESVVPAERRQYIYDLWREDRQLLERNRYIANTFQLFADNPT------------- 173 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 + M+ LE I FY FA +A A M+G A I+ I RDE Sbjct: 174 -----------DEHFVRACMAQYVLEGIYFYSGFAFFYALARMGKMKGTATEIQFINRDE 222 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 H+ Q++LN LR + + + QAA+ E WA Y + + G Sbjct: 223 ITHVAVFQNILNGLRQERPQ----LFTPQLDADLRAMIRQAAEHEMAWAAYCVGN-RIQG 277 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 L+ ++L YV+++ + R +A+G + + NPI W+ ++ + + E V++Y Sbjct: 278 LSGEVLQGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAK 337 Query: 360 GQIDSEVDTDDL 371 +D DDL Sbjct: 338 ST---NIDLDDL 346 >UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB3_9FIRM Length = 347 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 75/367 (20%), Positives = 154/367 (41%), Gaps = 36/367 (9%) Query: 5 TFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ + D + + G N+ ++ KY + ++ FW PEE+++ +D DY Sbjct: 9 LFNPEGDIDVTQRRLIGGNTTNMNDFNNLKYTWTADWYRQAMNNFWIPEEINLGQDVKDY 68 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + LP E+ + L + LDS+Q + + I+ E++ + +F E +HS+SY Sbjct: 69 RQLPAAERRAYDKILSFLVFLDSVQSANL-PNVSAYITANEVDLCLTIQSFQECVHSQSY 127 Query: 124 THIIRNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 ++++ I ++ + +E + R I Y+E + Sbjct: 128 SYMLDTIASPDERQEIIFQWKDDEHLLARNTFIGDLYNEFQQ------------------ 169 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + ++ L++ LE I FY F + M G+ + IR I RDE Sbjct: 170 ------EQSRENFLRVLIANYILEGIYFYSGFMFFYNLGRIGRMPGSVQEIRYINRDENT 223 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL +++L LR+ D E ++ ++ + +QE W Y + + GLN Sbjct: 224 HLWLFRNILRDLRAEEPD----LFTPEREEMMREMIREGVRQEIAWGKYAIGN-EVEGLN 278 Query: 302 KDILCQYVEYITNIRMQAVGLDLPF---QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 + ++ YV Y+ N R +++GL + + + + W++ + + ++ E ++Y Sbjct: 279 EKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYA 338 Query: 359 VGQIDSE 365 + Sbjct: 339 KSTALVD 345 >UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit beta n=13 Tax=Bacillales RepID=RIR2_BACHD Length = 345 Score = 260 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 77/371 (20%), Positives = 151/371 (40%), Gaps = 33/371 (8%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + T + G+ NV +D ++ L + L+ FW P E+++S D Sbjct: 4 LQKRKIYDTTASNASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDA 63 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E E+ F + LDS+Q ++ ++ L + +F E +H+ Sbjct: 64 KQFPTLTETEQEAFKKIIGLLAFLDSVQT-DYSMRAAEYLTDSSLAALMSVLSFQEVVHN 122 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ ++V +F+ ++ +++R E I Y++ ++ + Sbjct: 123 QSYSYVLSSLVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPT------------ 170 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 K ++ LE + FY FA + A + M + +I I RD Sbjct: 171 ------------PKTFLESIVYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRD 218 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E LH+ ++ L + EE K ++AA EKDW Y+ D + Sbjct: 219 EQLHVYLFTNIFKELLVEFPE----LNTEETKTFVKTTLMKAADLEKDWFRYIIGD-KIP 273 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSY 357 G+N + + Y+ +I N R +G++ P+ + NP+ WI + ++ + E + Y Sbjct: 274 GINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQY 333 Query: 358 LVGQIDSEVDT 368 D+ D Sbjct: 334 AKVSADNGFDE 344 >UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=root RepID=B7GK18_ANOFW Length = 345 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 76/372 (20%), Positives = 149/372 (40%), Gaps = 34/372 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + + + G+ + ++ KY F + + L FW P E+++S D Sbjct: 3 LTKVKLLEPSHPNKATSIINGKASGILNWNDIKYSHFYDIYKMLLGNFWTPFEINMSDDI 62 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + AL E E+ F+ + ++LDS+Q A+ I+ P ++ E +H+ Sbjct: 63 KQWHALSERERDAFLHIIGLLSILDSVQPNFIG-AMKEYITDPSVKAIFSIIEQQEVVHN 121 Query: 121 RSYTHIIRNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ +I +++ F+ TN I KR E + Y+ E + Sbjct: 122 QSYSYVLASIEKLSEQHRAFEMARTNPHIYKRNEHVIRVYEAFREQPT------------ 169 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++ LE I FY FA + A + M + +I I +D Sbjct: 170 ------------VETFCRALVASLVLEGINFYSGFAFFYNLARNQKMLKTSTMISYINKD 217 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H ++ + + YD +A + E +W+ ++ RD + Sbjct: 218 ELCHSYFISQLVRAVLWENP---QIDENGAFSAWIYDYIDEAIRYETEWSRFVLRD--ID 272 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL--VSDNVQVAPQEVEVSS 356 G++ + +Y+EY+ N R++ +GLD + N +PWI + + + E S Sbjct: 273 GIDVIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGKTDFFEARPRS 332 Query: 357 YLVGQIDSEVDT 368 Y + D Sbjct: 333 YTKTTDVNGFDE 344 >UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Proteobacteria RepID=B0TZS9_FRAP2 Length = 410 Score = 255 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 68/342 (19%), Positives = 130/342 (38%), Gaps = 37/342 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--ALPEHEKHIFISNLKYQTLLDS 86 Y Y L K W +E+D+S D D++ + + EK + L+ T D Sbjct: 100 YKPFSYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDV 159 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 G++ +PL E+ + ++A E IH R+Y + + P + + + Sbjct: 160 AVGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGL-PDSEYHAFLEYKA 218 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 + + + + + ++ L LCL E Sbjct: 219 MTDKIDFMMD-----------------------------ANPNTRRGLGLCLAKTVFNEG 249 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + SFA F M+G K++ RDE++H+ G + + + Sbjct: 250 VALFASFAMLLNFQRFGKMKGMGKVVEWSIRDESMHVEGNAALFRIYCQENP----YIVD 305 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + K+E Y + +A + E + D + G++ GL D + +Y+ +IT+ R+ +GL+ + Sbjct: 306 NQFKKEIYLMASKAVELEDKFIDLAYEIGTIEGLKADEVKEYIRHITDRRLNQLGLNEIY 365 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+ W+ L E V+ Y V + D Sbjct: 366 NIDKNPLTWLEWILN-GADHTNFFENRVTEYEVAGLTGNWDE 406 >UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Verrucomicrobia RepID=C0ACD0_9BACT Length = 362 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 132/361 (36%), Gaps = 29/361 (8%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA---LPEHEKH 72 + + G+ KY L + W PE++ + +D ++ + + E+ Sbjct: 26 KRVINGRETMTFNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERW 85 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 I + Y + + I G + L++ PEL+ + A E IH+ S ++I ++ Sbjct: 86 IIRMGIGYFSAAEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGI 145 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +P I ++ E + + + ++ E K+ Sbjct: 146 NPHECEAMFEDIPTIVRKNEFVVK------------------NSRQLRRDLDLTQPENKQ 187 Query: 193 KLYLCLM-SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 L + +E +FY F + + G ++ R RDE+ H+ +++L Sbjct: 188 LLARNMFLFGQCMEGTQFYGLFGMILSLYRQNKFPGIGQMFRYTLRDESNHIEVFRNLLM 247 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 L + K+E + +A EK++ + +GL D Y++Y Sbjct: 248 DLVEENPE----IWTPGFKEELRETMREAVTLEKEFIRDCLP-VNAVGLAVDEFLTYIDY 302 Query: 312 ITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 I + R++ VGL NP+PW+ + Q E V+ Y + D+ Sbjct: 303 IADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQ-NFFEGRVTEYQKASSLAVTHDDE 361 Query: 371 L 371 L Sbjct: 362 L 362 >UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Bacillales RepID=C6IYS7_9BACL Length = 343 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 74/376 (19%), Positives = 150/376 (39%), Gaps = 38/376 (10%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M T T+ + G+ + ++ + KL + L W +E+ +++D Sbjct: 1 MQLQTIFNTEAPNKSTRIIGGECSGILNWNDIRMPHMYKLYKVLLLNHWIADEIPMAKDA 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E+ F N+ +LDS+Q + + LE E +H+ Sbjct: 61 QQFALLDPEEQRTFKINISLLAVLDSMQT-MFVGDVKRYFTDSSLEAISAIIGQQEVVHN 119 Query: 121 RSYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ +IV++ +F+ + + R + I++ Y + + Sbjct: 120 QSYSYVLSSIVSEQEQKEIFEYWKHDPVLLDRNKFIANIYQNFRDEPT------------ 167 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + + L++ LE I FY +FA + A + M G +++I I RD Sbjct: 168 ------------PQSFFEALVADLILEGIFFYSTFAFFYNLARDQKMMGTSQMISYIQRD 215 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H + L + +E Y +A + E +WA Y ++ + Sbjct: 216 ENQHCYFFAEVFKQLLIDYPE----LNTKENIDYAYRTIDRAVELETNWAHYTLKN--VP 269 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLV--SDNVQVAPQEVEVS 355 G++ + L Y++YI N R+ +GL+ + N +PWI + + + E + Sbjct: 270 GIDLNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSR 329 Query: 356 SYLVGQIDSEVDTDDL 371 +Y G++ + DDL Sbjct: 330 NY--GKVGDDNGFDDL 343 >UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K6_THERP Length = 328 Score = 254 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 145/348 (41%), Gaps = 25/348 (7%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKH 72 + + G P+ + +++ W PEEV + D D+ L + E+ Sbjct: 1 MARRLLGGDPLAAVELFPLSHPWAYAHVQQAKHNTWFPEEVPLHDDVRDWHERLSDEERR 60 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 L + ++S+ + ++L ++ PE ++ A+ E H ++ ++I+ + Sbjct: 61 AVEMFLGFFNPMESLVTTNLLLSLYRAVTAPEARLYLARQAWEEANHVMAFEYVIKTLPL 120 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 D VF V + + + ++ + + G ++ Sbjct: 121 DRERVFGLHVEHPAVAAKELFQRQLAEQWLVTPDVESVEGL-----------------QR 163 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + + LE I FY FA + AF +R L+ G I+ + +DE+LHL+ H++ Sbjct: 164 LVRNLVGYFVILEGIFFYSGFALALAFRQRNLLRGLCTIVDWVLKDESLHLSFGIHLITT 223 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 + + ++ ++ +L ++A + E+ + + + +IGL+ D+L +YV YI Sbjct: 224 ILEEHPE----IMSAAFGRQLRELILRAVELEEAYNRAVLPE-PLIGLDADVLNRYVRYI 278 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 + R++ +GL + F NP+ W+ + + V E Y VG Sbjct: 279 ADRRLEELGLPIAFG-EPNPLRWMVAQVDMPEI-VNFFEARNIHYEVG 324 >UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=A4XD08_SALTO Length = 350 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 141/359 (39%), Gaps = 28/359 (7%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E P +Y F ++ + W EEVD+ D D L E+H+ Sbjct: 17 ERHLLLDPGMDLTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAKLSSAERHLVS 76 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 + + D+I + + L ++ PE ++ F E +H + Y +++ V + Sbjct: 77 RLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEK 136 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 F + I ++AE + D + E+ + + + Sbjct: 137 ERFAAFAAVENIPSIARKAEFCFRWIDSIFELRE-----------------LRTQADRRA 179 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L + +E + FY +FA + R L+ G A + RDE++H+ +++ Sbjct: 180 FLLNLICFAACIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDT 239 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 +R+ D + +++ ++ +A E +A+ L G + GL+ + +Y++++ Sbjct: 240 VRAEEPD----LFDADLERQVKEMVAEAVDCEVQFAEDLLEQG-VSGLSLADMREYLQHV 294 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + R+ +G+ + + +NP ++ V E VS+Y +G S DD Sbjct: 295 ADRRLVTLGIAPMYGS-ANPFAFMELQDV--QELSNFFERRVSAYQMGVSGSVTFDDDF 350 >UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=Actinomycetales RepID=C7NLI2_KYTSD Length = 365 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 74/375 (19%), Positives = 145/375 (38%), Gaps = 31/375 (8%) Query: 1 MAYTTFSQTK-NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRD 59 M T ++ D +K+ P +Y F ++ + W EE+D+ D Sbjct: 15 MTSETHLESDLRDAVKQGSSLLDPGMSLTLRPMRYPQFYEMFRDAIKNTWTVEEIDLHSD 74 Query: 60 RIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 D L E+H+ + + D+I + + L I+ PE ++ F E + Sbjct: 75 LADLHNKLSPAERHLVSRLVAFFATGDTIVANNLVLNLYEHINSPEARLYLSRQLFEEAV 134 Query: 119 HSRSYTHIIRNIVNDPSVVFDDI---VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGT 175 H + Y ++ V D + F+ I+ +AE ++ D + Sbjct: 135 HVQFYLTLLDTYVPDEAERFEAFAAVENIPSIRTKAEFCFTWIDSI-------------- 180 Query: 176 HTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLI 235 + + ++ L + +E + FY +FA + R L+ G A + Sbjct: 181 ---ENLGQLETKEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWV 237 Query: 236 ARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG 295 RDE++H+ ++ +RS D E + + ++A E +A+ L G Sbjct: 238 FRDESMHMAFAFEVVETVRSEEPD----LFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMG 293 Query: 296 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 + GL+ + Y+E + + R +G+ + T+ NP+ ++ V E VS Sbjct: 294 -VAGLSVADMRAYLENVADRRAVQLGMPEIYGTK-NPLAFMELQDV--QELSNFFERRVS 349 Query: 356 SYLVGQIDSEVDTDD 370 +Y VG ++ V D+ Sbjct: 350 AYQVG-VEGSVSFDE 363 >UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Halobacteriaceae RepID=B0R7R4_HALS3 Length = 331 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 133/341 (39%), Gaps = 28/341 (8%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY--QALPEHEKHIFISNLKYQTLLDSIQ 88 YD + ++ ++ W PEEV + D + L + E+ + NL + + +S+ Sbjct: 17 PIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAESLT 76 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + +A+ ++ PE ++ A+ E +H+ ++ + ++ DP ++ I Sbjct: 77 ANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGFDPEHMYGMYDRIPSIA 136 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 ++ E + + + + + + +E I Sbjct: 137 EKDEFVVGLTRAVDDQAFTIDTDDDLRDFLRDL----------------VGFYVIMEGIF 180 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 FY FA A R M G + I RDE+LHL ++N +R D A+ Sbjct: 181 FYAGFAMMLALKRRGKMVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVWTAD---- 236 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQT 328 + E L A E+ +A D ++G++ + YVEY+ + R Q + +D + T Sbjct: 237 FEAEVNSLMRDAVDLEQLYARDACPD-DLLGMSSEQFADYVEYVADRRFQQLRMDPVYGT 295 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 NP PW+ + + E VS Y G +D D Sbjct: 296 D-NPFPWMTEQVDLNTE-TNFFERNVSEYQQG---GSLDWD 331 >UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI5_9CAUD Length = 367 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 161/369 (43%), Positives = 212/369 (57%), Gaps = 14/369 (3%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 ++ F + N+ FFG PV++ RYD + +K EK LS FWRPEEVD+++D+ Sbjct: 6 QFSVFDPSSNNTGLP--FFGDPVSIQRYDIVAWPFVQKWYEKGLSQFWRPEEVDITKDKA 63 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY L EK I+ SNLK QT+LDSIQG +P A P S PE++ V W E IHS Sbjct: 64 DYATLTPAEKRIYESNLKRQTMLDSIQGAAPFEAFGPWASTPEMQFAVLEWTRQEAIHSL 123 Query: 122 SYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 SYTHI+RN VNDP +VFD ++ +I A IS++YD+ + G Sbjct: 124 SYTHILRNTVNDPGIVFDHVLDVAEIVDCAHQISTHYDD--------MVRYSGMRMAGRA 175 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEA 240 + K+ + L + N LE IRFYVSFACS+AF + ++ MEGNAKIIR IARDE Sbjct: 176 FTREDIMNAKRAFWRALFAANTLEGIRFYVSFACSWAFTQFQKKMEGNAKIIRQIARDEQ 235 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 HL TQ +LN L DP+ I EE + E +F+ QEK WADYLF+DGSM+GL Sbjct: 236 DHLILTQTLLNRLPG--MDPDFEIIREELRGEMTQMFLDVGNQEKQWADYLFQDGSMLGL 293 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSN-PIPWINTWLVSDNVQVAPQEVEVSSYLV 359 N IL V+++ RM A+G P + R P+PWIN WL + +Q A QE E YL+ Sbjct: 294 NAKILHHMVDWLLTHRMGAIGHPYPGEPRKECPVPWINEWLNNKTMQYALQEAEAPDYLM 353 Query: 360 GQIDSEVDT 368 G + V Sbjct: 354 GVLTGSVSD 362 >UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Bacteria RepID=B0U5P0_XYLFM Length = 349 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 76/372 (20%), Positives = 144/372 (38%), Gaps = 35/372 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + +N + G+ + ++ Y F + ++ + FW P+EVD+ D+ Sbjct: 8 LDRIKILEPRNPNRSTGIINGKTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDK 67 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 Y L EK+ + + + LDS Q R + I+ P E IH+ Sbjct: 68 RQYGELSAREKNAYDAIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHN 126 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 SY++++ +I + + + VF+ T+ I KR I YD+ + + Sbjct: 127 ESYSYVLASITDLANQNRVFEIARTHPTILKRNAPIMQAYDDFMREKTA----------- 175 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L L+ + LE I FY FA + + M G KII I RD Sbjct: 176 -------------ETLLYSLIQSSILEGINFYSGFAYFYNLVRQNRMTGTGKIISFINRD 222 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H ++ + + + + F A + E W + + Sbjct: 223 ELAHTKFISEVIRAIVGENPELQTDA----LTDYVHQAFAHAIELETQWTGEVLN--GID 276 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVS-DNVQVAPQEVEVSS 356 G++ + + +YV+Y N +G++ + +T N +PWI + + + E+ +S Sbjct: 277 GIDVEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEMRNAS 336 Query: 357 YLVGQIDSEVDT 368 Y +D+ D Sbjct: 337 YKKTNVDNCFDD 348 >UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_SYNY3 Length = 355 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 168/373 (45%), Gaps = 44/373 (11%) Query: 5 TFSQTKNDQ-LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ T ND ++FG N+ + + +Y+ L ++ FW P+ +D+++D DY Sbjct: 17 IFNPTGNDSVENRTIWFGNTTNLMQLNDVRYNWAVGLYQQMRENFWIPQRLDITQDVTDY 76 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 L E++ F L Y T LDS+Q + L ++ PE+ + E +H++SY Sbjct: 77 WNLTNEERYAFDGILSYLTFLDSVQTCNI-PHLKSSVTAPEISLCMAEQISQEGMHNQSY 135 Query: 124 THIIRNIVNDP--SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 ++I I+ V++ T+ +++R E I+ Y + ++ + Sbjct: 136 QYMIETIIPTEKRDKVYEFWRTDRVLKERCEYIAMLYQKYVDHPT--------------- 180 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 ++ ++ LM+ LE + FY F + A R LM G+A I ++I RDE Sbjct: 181 ---------QENYFIALMADYLLEGLYFYNGFIYFYNLASRMLMPGSADIFKMINRDELS 231 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H+ Q ++ PE ++ + Y++F +A + E W +++ + +++G+ Sbjct: 232 HVRLYQKLI---------PEAMQVFTHSTDQIYEMFDKAVEFECRWTNHIVGN-NILGIT 281 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRS---NPIPWINTWLVSDN---VQVAPQEVEVS 355 + QY +Y+ N R++A+GLD + +P + + + + E V+ Sbjct: 282 ESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEAHTKANFFEATVT 341 Query: 356 SYLVGQIDSEVDT 368 SY++ S D Sbjct: 342 SYVMSSGVSGWDE 354 >UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain n=68 Tax=Alphaproteobacteria RepID=B3CU68_ORITI Length = 359 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 63/341 (18%), Positives = 116/341 (34%), Gaps = 35/341 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSI 87 Y Y K Q W PEEV ++ D D++ L EKH+ ++ T D Sbjct: 25 YKPFSYPWAYKAWHTQQKIHWLPEEVPLADDIKDWKYNLTPGEKHLLTQIFRFFTQADIE 84 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + E++ + ++ ETIH +Y+H++ I P + + + + Sbjct: 85 VNNCYMKHYARVFQPTEVQMMLSAFSNMETIHIAAYSHLLDTIG-MPETEYQAFMKYKAM 143 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + + + + ++ ++ + E + Sbjct: 144 KDKYDYMQRF----------------------------NVDNKEEIATTLAVFGAFTEGV 175 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + SFA F M+G +II RDE LH + + E Sbjct: 176 QLFASFAILLNFPRYNKMKGMGQIITWSVRDETLHTNSIITLFKTFIQEYPEV----WTE 231 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 + K Y+ E + D F G + GL + +Y+ YI + R+ +GL + Sbjct: 232 QLKSRIYEACCTIIHFEDAFIDLAFEVGGVEGLEARDVKKYIRYIADRRLLQLGLKENYL 291 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+ W++ L E V+ Y D Sbjct: 292 IEQNPLTWLDQILN-GVEHTNFFENRVTEYTRSATTGSWDE 331 >UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=Proteobacteria RepID=Q2S729_HAHCH Length = 405 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 70/348 (20%), Positives = 138/348 (39%), Gaps = 27/348 (7%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHI 73 + + G ++ + KY + W P ++++S+D DY L EKH+ Sbjct: 80 DKRVVNG-MTDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKHV 138 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 + + L Y T D + R+ +A++ +S PEL+ + + E++H+ +Y H I I D Sbjct: 139 YENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIETIGLD 198 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 S +++ I ++ + + L+ + +L+ Sbjct: 199 QSEIYNRYRVTPAIYRKIKMGNERISALLRPDINLR----------------NRDDLETF 242 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLL 253 + + E FY F+ FA R LM+G + ++ I RDE +H ++ + Sbjct: 243 VMAYIFFAGIFEGCWFYNGFSPIFALQRRGLMKGTGEQLQYIMRDEVMHCAFGIRVVKQI 302 Query: 254 RSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYIT 313 E + L+ +A E +A +L ++ ++G + + +I Sbjct: 303 IKE-------EGVTLDPKAIKTLWEEAEAAETGYAHFLLKE-PILGYTAEDHIEQFRFIA 354 Query: 314 NIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 N R + + LD PF N +PW++ + E V+ Y G Sbjct: 355 NRRAKQLKLDEPFPGAGNALPWLDEQASMRKEK-NFFETRVTEYQTGA 401 >UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=B4D9U7_9BACT Length = 390 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 133/359 (37%), Gaps = 27/359 (7%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHI 73 + + G KY ++ ++ + W P+ +D++RD + L E+ I Sbjct: 55 KRVINGLRSAELNVLPLKYHEAYRIYKQMKANHWEPDVIDMTRDSQQWNTGALSPKERWI 114 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 + Y + + I G S + ++ EL+ E+IH S HII ++ D Sbjct: 115 IEMGVGYFSAAEGIVGDSVLHVIEDNLTAAELKHASLRHIAEESIHMDSLLHIIGSLNID 174 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 V +Q++ I+ + EL + ++ K+K Sbjct: 175 LDEVTAKFSDIPSVQRKNAFITRHMPEL------------------KMGIDLTQTANKQK 216 Query: 194 LYLCLMSVN-ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + + +E +FY FA + + M G ++ + RDE+ H+ +++L Sbjct: 217 FAKAIFGITQVMEGTQFYALFAMILSLHRQNKMTGIGQMFQYTLRDESNHIELGRYILTQ 276 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 L + D E + E + + + EK++ + + G+ + YVEY Sbjct: 277 LIAENPD----IWTPEFRAELVEFMREGVELEKEFVRDCLPEDGV-GMTQADFLTYVEYN 331 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + R+ + L ++NP W++ + + E V+ Y DDL Sbjct: 332 ADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEK-NFFETRVTEYQTSGSLKNTAEDDL 389 >UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 Length = 419 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 135/348 (38%), Gaps = 50/348 (14%) Query: 21 GQPVNVARYD---QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 ++ + +Y +L +KQ + FW EE+D+S D D++ EKH Sbjct: 101 EDFDRFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLV 160 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV- 136 L + LD I + + I IP++ +E +H SY+ +I+ D Sbjct: 161 LAFFASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQ 220 Query: 137 --VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 V I T I+K+A + + L Sbjct: 221 RHVMRSIQTMPIIEKKALWAEKWMN-----------------------------PETASL 251 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 L+ LE ++F SF + +R+ +G + LIARDE LH T + + L+ Sbjct: 252 AERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIARDEGLHATASVLIYKHLK 311 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 + ++ +++F A E ++ ++IG+++ + +Y++++ + Sbjct: 312 NRLP-----------RERVHEIFKHAVSVECEFISSALP-VALIGISEKSMTEYIKFVAD 359 Query: 315 IRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + +G D + +NP W++ ++S + E V+ Y + Sbjct: 360 YWLNQLGYDKVYNC-ANPFEWMD--MISLQGKTNFFENRVAEYSKPGV 404 >UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain n=8 Tax=Fungi/Metazoa group RepID=B7XP84_ENTBH Length = 336 Score = 244 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 113/325 (34%), Gaps = 48/325 (14%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHI 73 EP+ + +Y + + S FW EEVD++ D + L +E+ Sbjct: 24 GYEPLLDEAKKRYVIF-PIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFF 82 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 L + D I + + I E + + E IHS Y+ +I ++ D Sbjct: 83 IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142 Query: 134 PSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 +F+ I I+K+A + Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIAS------------------------------ 172 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 ++ +E I F SFA F +R LM G LI+RDE LH + Sbjct: 173 DTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLH 232 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + + D+ +A E+++ S+IG+N ++CQY+E Sbjct: 233 KYINNKCT-------------VIEDIVREAVAIEQEFLSESLP-VSLIGMNCKLMCQYIE 278 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPW 335 ++ + + A+G + ++ I W Sbjct: 279 FVADRLLFALGERKIYTFLTHSISW 303 >UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Bacteria RepID=C6D5U5_PAESJ Length = 318 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 72/349 (20%), Positives = 143/349 (40%), Gaps = 38/349 (10%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 +++ D ++ + FW EE+ +S D++D+ + + E+ ++ + L TLL Sbjct: 2 KAVNWNRPDDDFTLTFWQQNVMQFWTDEEIPLSDDKMDWMEMSDTERTVYKNVLGGLTLL 61 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIV 142 D+IQG +L + + + + + E IH++SY+ I + + + +F + Sbjct: 62 DTIQGGVGMPKILEHVDGLQRKAVLAFMSMMEQIHAKSYSSIFTTLASTEEIDAIFQWVE 121 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 TNEQ+QK+A +SS+Y + E K++LY + + Sbjct: 122 TNEQLQKKATLVSSWYQGI---------------------------ETKQQLYKAMAASV 154 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 LE+ FY F A + M + +II LI RDE++H + L + E Sbjct: 155 FLESYLFYSGFFYPLYLAGQGKMTSSGEIIDLILRDESIHGLYVGVLAQELFNQFTPEEQ 214 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + K+E + L + E + D L+ + ++ + YV Y N + +G Sbjct: 215 ----AQLKEEVFALLNTLYENEVVYTDNLYSPIGL----QEDVKAYVRYNANKALMNLGF 266 Query: 323 DLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + F P + + + Q + + Y+ ++ +D Sbjct: 267 EPYFPEEP-VNPIVFNGISTHTKQHDFFSKKGNGYVRTVHIEQLRDEDF 314 >UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain n=7 Tax=African swine fever virus RepID=RIR2_ASFB7 Length = 334 Score = 240 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 133/361 (36%), Gaps = 46/361 (12%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E + + ++ +K S W +EVD+ +D D++A+P+ ++ + Sbjct: 9 EELLIENSQRFTIF-PIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYK 67 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 L + + D I + + I + E+ + A E +HS +Y+ ++ ++ D Sbjct: 68 QILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEK 127 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +F I + I+K A+ + + D + Sbjct: 128 EQQRIFSGIEKHPIIKKMAQWVRQWMD-----------------------------PDRN 158 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L L+ A+E I F F E+ +M G I+RDE +H + +++ Sbjct: 159 TLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNEFISRDEGVHCSFACFLISN 218 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFR--DGSMIGLNKDILCQYVE 310 + ++ + + +A + ++ +Y F G + G +K++L QY+ Sbjct: 219 YVYNIPE----------EKIIHKILKEAVELVDEFINYAFDKARGRVPGFSKEMLFQYIR 268 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 Y T+ + ++ NP P + + +++ + E+ + Y D Sbjct: 269 YFTDNLCFMMQCKSIYKV-GNPFPQMTKFFLNEVEKTNFFELRPTQYQNCVKDDAFAFKL 327 Query: 371 L 371 Sbjct: 328 F 328 >UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subunit n=9 Tax=Bacteria RepID=B0RGP8_CLAMS Length = 331 Score = 240 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 140/346 (40%), Gaps = 25/346 (7%) Query: 17 PMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFIS 76 + Y L ++ ++ W P E+ + D D++ + + E+H Sbjct: 3 KILGTGIQEGLLLKPVNYQWAMDLYDQAVANTWFPNEIQLGEDIADFKKMTDEERHAITF 62 Query: 77 NLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 + Y + + ++ + P I+ PE ++ + E H S+ +++ D Sbjct: 63 LMSYFNPNELLVNKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETFPIDREA 122 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 ++ V + ++ E + + E +T+ ++ E KK Sbjct: 123 AYNSHVDIPSMARKEEFEVKFIKRMTE-----------------QTLDITTTEGKKDFVR 165 Query: 197 CLMSV-NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRS 255 L++ LE I FY F S +F +R L+ ++ I RDE+LHL +++ + Sbjct: 166 NLVAYNVILEGIWFYSGFMVSLSFRQRNLLRNFGSLMDWIVRDESLHLKFGINLILTVLE 225 Query: 256 GADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNI 315 D + EE E + + A + E+ + L +G ++GLN + + QYV+Y+ + Sbjct: 226 ENPDLQT----EEFAAEIKQMILDAVEMEEQYNRDLLPNG-ILGLNANYINQYVKYLADR 280 Query: 316 RMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 R++ +G + ++ SNP W+ T V E +SY Sbjct: 281 RLEELGFEAEYKV-SNPAKWMAT-ANDTLQLVNFFESTNTSYESNA 324 >UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 Tax=root RepID=Q7Y4S0_BPR69 Length = 390 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 178/387 (45%), Positives = 242/387 (62%), Gaps = 15/387 (3%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 T F+ + D L EPMFFG + +ARYD Q++ +FE+LI + LSFFWRPEEV++ D Sbjct: 2 STVFNTQQVDVLNEPMFFGSGLGLARYDIQRHKVFEELI-EILSFFWRPEEVNLMLDSAQ 60 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 + LP+ ++ I +NLKYQ+LLDSIQGR+P+ L+ LIS P L+TWV TW FSETIHSRS Sbjct: 61 FNKLPQFQQDICTNNLKYQSLLDSIQGRAPSAVLMALISDPSLDTWVATWTFSETIHSRS 120 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 YTHI+RN+ DPS VFD+IV +E I KRAE I YYD+++ T W E G Sbjct: 121 YTHIMRNLYTDPSKVFDEIVLDEAIMKRAESIGKYYDDVLVKTRNWENAKEVYECSIGSC 180 Query: 183 VTVS-----------LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER-ELMEGNAK 230 R+L K LYLCL +NALEAIRFYVSFAC+F F + E+MEGNAK Sbjct: 181 QQNDIEMYEEIMFNAKRDLMKSLYLCLHVINALEAIRFYVSFACTFNFHKNMEIMEGNAK 240 Query: 231 IIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADY 290 I++ IARDE LHL + ++ + ++ + + K+WA + Sbjct: 241 IMKFIARDEQLHLRVLSTLSVNFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKYKEWAAH 300 Query: 291 LFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ--TRSNPIPWINTWLVSDNVQVA 348 LF+DG+ G+N +C +V+Y+T RM+ GL P +P PWI +L SD VQ A Sbjct: 301 LFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLNSDLVQAA 360 Query: 349 PQEVEVSSYLVGQIDSEVDTDDLSNFQ 375 PQEVE+SSYLV QID++VD + +++++ Sbjct: 361 PQEVEISSYLVAQIDNDVDQNVINSYK 387 >UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase small subunit 048L n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR2_IIV3 Length = 376 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 119/341 (34%), Gaps = 18/341 (5%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 + +Y + W +E+++ D D+ L E EK + L++ T D Sbjct: 53 FKPFEYPGCYDKWDTHEHAHWSFKELNMQDDVHDWHNRLSEAEKTFLVQILRFFTQGDVD 112 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 L L PE+ + ++ E +H SY+H+I + P V + + + + + Sbjct: 113 VAVGYV-QYLQLFQQPEVRMMLFSFGAREAMHIASYSHLISTLNL-PDVTYQEFLKYKAM 170 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + E + + + L++ + +E + Sbjct: 171 KDKHEFVFN-----------SRFKSTTVGRFFNYLLFGYDTHLEEIAVKIALFSAFIEGV 219 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + SF F LM+ +II+ DE H + + L Sbjct: 220 QLFSSFIMLLNFTRHGLMKKMGQIIQWSIADETHHTNSMMELFSTLVVENK---SHIRLG 276 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 + D + Q E + D F G M L D + Y+ YITN R+Q +G + Sbjct: 277 VLEARVRDTARKIVQLEDGFIDLAFSMGEMRQLTADDVKSYIRYITNRRLQTMGYLPLYS 336 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+PW+ L + + E + + Y + + Sbjct: 337 VVENPLPWVEDLLNAPS-HTNFFENKPTEYAKASLTGDWPW 376 >UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C3B1_9GAMM Length = 374 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 67/366 (18%), Positives = 135/366 (36%), Gaps = 28/366 (7%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + + + G+ +V + KY + FW P E+ + D+ Sbjct: 27 LDAISIGTKRPSSSDIKIIGGRGYDVRQPIPVKYTSVRERFLNARKNFWIPNEIPMGEDK 86 Query: 61 IDYQA--LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 + + L E E +F SN+ Y T D++ + + A+L I+ E+ + E+ Sbjct: 87 LQWNTGLLTEAEMWLFKSNISYLTASDNLVPDNLDNAILKHITANEMRQYFRHQIMEESN 146 Query: 119 HSRSYTHIIRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGT 175 H SY I+ + D +F+ + ++ T Sbjct: 147 HIESYLFILESFGLDEKGQGQIFNLYQEVPALTEKLNW-----------------NLTFT 189 Query: 176 HTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLI 235 + V E + L L+S E + F + F+ FA A + + A+ I Sbjct: 190 NNVVNSEAPRGTLEANRALLEDLISYYIFEYLFFPLGFSQIFALARKGKLRNTAQQYSYI 249 Query: 236 ARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG 295 RDE LH + ++ + ++ + +A + E D+A +G Sbjct: 250 WRDENLHSSNGLWLIKQIIQEN----HELWDSTMQERSRAIVSEAVKLETDYAHASMPEG 305 Query: 296 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 ++GL ++ ++ + + +G+ F+ R +P+PWI+ + ++ V E V Sbjct: 306 GIVGLPVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEYELNHE--VNFFEGRVR 363 Query: 356 SYLVGQ 361 Y G Sbjct: 364 EYQTGS 369 >UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=Alphabaculovirus RepID=A0EZ20_9ABAC Length = 341 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 126/348 (36%), Gaps = 23/348 (6%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQG 89 + ++ + + W+ EE D+SRD D+ L E+ L + D+I Sbjct: 13 PIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASADTIVN 72 Query: 90 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQ 146 + + + E + + E +HS Y+ ++ + + + + + Sbjct: 73 INLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAFDRIDC 132 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 I+K+A+ + + W + + KL +++ +E Sbjct: 133 IKKKAQWALKWTES------KWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFAIVEG 186 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 I F SFA F + LM G LI+RDE LH N + Sbjct: 187 IFFSGSFAAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYYNNYIPINE-------- 238 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + Q+ +F++A EK++ ++G+N +C+Y+E++ + + + F Sbjct: 239 KLSPQQILSMFIEAVDIEKEFFTTALP-CYLLGINATEMCKYIEFVADRLLVELRQPKHF 297 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNF 374 T NP ++ +S + E V Y +V + L F Sbjct: 298 NT-PNPFNFMTN--ISLEGKTNFFERRVGEYKRFGAGQDV-YEILEEF 341 >UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subunit n=7 Tax=Ranavirus RepID=Q8QYZ8_RTRV Length = 387 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 122/349 (34%), Gaps = 40/349 (11%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDS 86 + +Y E + K W E+++ D D+++ + EK L+ T LD Sbjct: 73 FKPFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEKAFVSCVLRLFTQLDV 132 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 G L + E+ + ++A E IH ++Y+ + + P + + Sbjct: 133 EVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLG-MPDCEYQAFADYVE 191 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 + + + + L L+ E Sbjct: 192 MTDKLDFMREM-----------------------------DCSTLPGLARSLLRAVLNEG 222 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + +F F M+G K++ RDE +H+ G + L S +I Sbjct: 223 VSLFAAFVMLLTFQRSGKMKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDII 282 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRD-GSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 E K++ + A+ E+ + D F++ G + L + YV Y+ N+R +GL Sbjct: 283 ELFKED----AERVAELEEAFVDLAFQECGPVCELEPKQVKDYVLYVINLRAANMGLPKL 338 Query: 326 FQ--TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + + PIPW+ WL+ E V+ Y G + + L Sbjct: 339 IERAPEACPIPWV-KWLIDGADLTNFFENHVTEYETGGLTGSWSYEPLD 386 >UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subunit n=4 Tax=Myoviridae RepID=A2PYM8_9CAUD Length = 348 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 150/373 (40%), Gaps = 44/373 (11%) Query: 5 TFSQTKNDQ-LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ + +D K +F G P N+ KY L + + W P+ D++ D +Y Sbjct: 8 IFNPSGDDSPQKRRLFGGNPTNIINLKDVKYKWASHLFTEMRANIWIPQATDLTPDINNY 67 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 +P + + F L Y T LDS+Q R L+P+I+ PE+ + E +HS+SY Sbjct: 68 VTMPPNMRRAFDGMLSYLTFLDSLQTRVL-PLLMPVITAPEVSICMGEQLSQEQVHSQSY 126 Query: 124 THIIRNIVND--PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 +II ++ +++ + + KR E I + YD I + Sbjct: 127 AYIIETVIPTDKRDYIYELWREDPVLLKRCEYIQNLYDRYIHEMT--------------- 171 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + + ++S LE I F+ F +A A M A II+LI RDE Sbjct: 172 ---------MENYTISMVSDFLLEGIYFFPGFRLFYAIANERYMSATADIIKLIERDEQT 222 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL +++ + E DLF +AA+ E +W ++ + G+N Sbjct: 223 HLKLISNIIRTGLAEGTLMWD-------TDEIIDLFRKAAEYEIEWGLHI--GLGVNGIN 273 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRS---NPIPWINTWL----VSDNVQVAPQEVEV 354 + QY +Y+ NIR +A+GL F+ R NP + + + E V Sbjct: 274 ATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGEDSITRDNFFESGV 333 Query: 355 SSYLVGQIDSEVD 367 ++ D Sbjct: 334 IYRNPAKVVDGWD 346 >UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Propionibacterineae RepID=D1YE85_PROAC Length = 328 Score = 234 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 133/345 (38%), Gaps = 25/345 (7%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 + Y L + ++ W P E+ + D D+ + E H Sbjct: 2 ILGSGIQEGLLLKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHL 61 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV 137 + Y + + ++ + P ++ E ++ + E H ++ +++ D Sbjct: 62 MSYFNPNELLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEA 121 Query: 138 FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 + + + ++ ++ + E +T+ ++ E K+ Sbjct: 122 YRSHIHVPSMARKEAFEVAFIKRMTE-----------------QTLDITTVEGKQDFVRN 164 Query: 198 LMSV-NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 L++ LE I FY F + +F +R L+ +I + RDE+LHL +++ + Sbjct: 165 LIAYNIILEGIWFYSGFMVALSFRQRNLLRNFGSLIDWVVRDESLHLKFGMNLILTVLEE 224 Query: 257 ADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIR 316 + +E E +D+ VQ + E+ + + G ++G+N D + YV+Y+ + R Sbjct: 225 NPE----IATDEFAAEIHDMIVQGVEMEEQYNRDMLPRG-ILGMNADYVNDYVKYLADRR 279 Query: 317 MQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ +G + ++ NP W+ T V E +SY V Sbjct: 280 LEELGFEPEYRV-VNPAKWMAT-ANDTLQVVNFFEATNTSYEVNA 322 >UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Bacteria RepID=C9XQ14_CLODC Length = 323 Score = 233 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 145/350 (41%), Gaps = 38/350 (10%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TL Sbjct: 9 HNAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTL 68 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND--PSVVFDDI 141 LD+ QG + +++ L + + + E IH++SY+ I ++++ +F+ I Sbjct: 69 LDTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWI 128 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 T +Q++A+ + + Y+ ++ LYL +++ Sbjct: 129 ETEPTLQRKADLVLAQYE---------------------------NTTNQEGLYLSMVTS 161 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F + + M + +II LI RDE+LH + + D + Sbjct: 162 VFLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLAQEIYDSFDKMD 221 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 + +++ Y + + E ++ + ++R+ + + +++Y N ++ +G Sbjct: 222 ----KKMLEEKMYSILYSLMENEIEYTNVIYRESGLE----KEVVNFLKYNANRALENLG 273 Query: 322 LDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + + + P + L ++ + + Y G + D D + Sbjct: 274 FEKLYTVDA-INPIVLNGLSTETKTHDFFSTKGNGYQKGVYEELEDEDFI 322 >UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase beta chain n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QU02_9CAUD Length = 365 Score = 233 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 103/372 (27%), Positives = 181/372 (48%), Gaps = 18/372 (4%) Query: 1 MAYTTFSQTKNDQL--KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSR 58 M+ T F+ + L P+F GQP+ + + Y L ++Q + W +EV++ Sbjct: 1 MSSTVFNHKNDAYLTASYPLFMGQPLAMYDSMNKIYPELFDLYKQQKAQDWSEDEVNLEN 60 Query: 59 DRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 RID+Q + E + I NL +Q DS R+ L P IS E V E + Sbjct: 61 SRIDFQTAAKSEIEVCIENLLWQWEADSRVSRNIITLLAPFISNNEFAAMVTKQTEIENL 120 Query: 119 HSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 H+ +Y+ I+R ++DP+ + ++ N+ + R+ I EL + + L E Sbjct: 121 HALTYSEIVRQCISDPTEMIKRVMDNQAVLDRSSTIDDVMAELEILGAKKRLGYE----- 175 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + +++ L ++S+ ALE + F SFAC+FA A+R L G A++++ I D Sbjct: 176 ------LDDEHIRQTLIKFMVSILALEGLEFIASFACTFALAQRGLFMGVAQLVQKIMLD 229 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SM 297 E LH L++L DP + + CK + + + + E +WADY+F +G S+ Sbjct: 230 EILHSKMDFAALDIL---LKDPVWFQSYQNCKGDVQRILDEVMENESNWADYIFSEGRSV 286 Query: 298 IGLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 +GLN +L ++V Y + LD + NP+P+++ W+ D+ Q A QE + S Sbjct: 287 VGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNIDSQQNANQEQDNSQ 346 Query: 357 YLVGQIDSEVDT 368 YL+ + ++ + Sbjct: 347 YLLNTMVNDDED 358 >UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=cellular organisms RepID=Q2RUE9_RHORT Length = 358 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 124/355 (34%), Gaps = 48/355 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY--QALPEHEKHIFISNLKYQTLLDS 86 Y+ ++Y + +KQ W EEV + D D+ + + E+++ ++ T D Sbjct: 26 YNVERYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWASDRVSDQERNLLTQIFRFFTQSDV 85 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 + +P+ E++ + + ETIH +Y ++ + P F Sbjct: 86 EVSDNYLKRYMPIFQPLEIQMMMAAFTNMETIHIDAYALLLTTLG-MPRTEFSAFRDYAA 144 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 ++ +A+ + ++ + S M E Sbjct: 145 MRDKADYMHTFGVGTMADVSRTL----------------------------AMFGAFTEG 176 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + SFA F M+G +I+ RDE+LH G + + + E + Sbjct: 177 MALFASFAMLLNFPRHNKMKGMGQIVTWSVRDESLHCQGIIRLFHEW-----NRETGALT 231 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + + D+ E+ + D F G++ G+ + + YV Y+ + R+ + L + + Sbjct: 232 KPVRDDILDVATTMVGLEEKFVDLAFELGAIEGMRAEDIKSYVRYVADWRLTQLKLPILY 291 Query: 327 Q-----------TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 R +P+PW+ L E + Y D D Sbjct: 292 GHFRETEAGYEQLRPHPLPWLVEILN-GVEHANFFEQRSTEYSKAATQGAWDGPD 345 >UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD Length = 352 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 74/365 (20%), Positives = 149/365 (40%), Gaps = 36/365 (9%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 + + + G+ + ++ + +I+ + + + FWRP E+ + D + + Sbjct: 17 LLEPSHPNRGTKIVGGECSGLLNWND-EDEIWYDISQTLEANFWRPVEIKMKEDEKMWDS 75 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L E+ F+ LDS+Q ++ ++ + L A E H+ SY++ Sbjct: 76 LTPIEQDTFLRVGTALACLDSLQVKAILE-VIRFTTNSALANISAFIAQQEATHTTSYSY 134 Query: 126 IIRNIVNDP--SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 I ++V P + F++ + + + KR + + Y++ E S Sbjct: 135 ITSSLVRLPVQNQYFNETMKHPVLAKRNKLVLDVYEDFAENPS----------------- 177 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 + L+ L+ LE I FY FA + A ++ M ++ +I I RDE H Sbjct: 178 -------LQNLFRMLVQSINLEGIYFYSGFAFFYWLASQQKMMKSSTMISYIQRDEMQHA 230 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 ++ L + + +E Q D +A EK+WA + D + GL+ + Sbjct: 231 YFIGLLIRRLLTENPE----LNTQENAQYIVDSLKEAVATEKEWAGEILAD--IEGLDLE 284 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLV--SDNVQVAPQEVEVSSYLVGQ 361 Y+EY+ N R++ +G+D ++ R NP+PWI + ++ + E + Y Sbjct: 285 EFDHYIEYLANKRVRQLGMDNIYEERGNPMPWIQVFSDEMMEHTKTDQFENKSRDYSGAT 344 Query: 362 IDSEV 366 + Sbjct: 345 KKNNF 349 >UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate reductase, small subunit n=2 Tax=Siphoviridae RepID=Q6QGJ3_BPT5 Length = 381 Score = 227 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 117/377 (31%), Positives = 204/377 (54%), Gaps = 11/377 (2%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 TT D + +F G + +A Y + + E+L S FW E+ + D+ + Sbjct: 2 TTLLNLNWDHTNKDLFLGDSLGIADYVRVAHPELERLALLARSQFWTETEISLEADKKQW 61 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 LP + I + NL +QT DS R+P A++PL+S PELE ++ W++ E +HSR+Y Sbjct: 62 PNLPREIQEITLLNLAWQTQTDSFISRAPEAAIMPLVSRPELEGMLKQWSYFEDLHSRAY 121 Query: 124 THIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLG--EGTHTVNGK 181 ++IIRN++ DP+ D + N++ R +DEL ++ Y+ + G +T Sbjct: 122 SNIIRNVLTDPAEFIDSVTKNQEAFARIADSVELFDELYQLGQYFIAVRDHRGDNTYPET 181 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 RE + KL ++ LEA++FY SFAC+FA AE ++++G AK ++LIA+DEAL Sbjct: 182 EFPEVKRETQAKLLDAYFAIYGLEAMQFYASFACTFALAENDILQGIAKNLQLIAKDEAL 241 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H ++ ++ ++ D ++ +E + ++ + E +W ++F+ S+IGLN Sbjct: 242 HTQMSKAIIQIMFQQFDK----DLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLN 297 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVE-VSSY 357 ++L +Y+ ++ +G++ P NPIPWI WL + ++Q APQE++ ++Y Sbjct: 298 AELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDTTSLQPAPQEIQIGAAY 357 Query: 358 LVGQIDSEVDTDDLSNF 374 VGQ+ E TD L + Sbjct: 358 RVGQVT-ETSTDTLKDL 373 >UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta subunit n=2 Tax=Granulicatella RepID=C8NFG6_9LACT Length = 346 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 73/371 (19%), Positives = 137/371 (36%), Gaps = 45/371 (12%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 F++ + +P+ + ++Q + I + EK FW + VS D Sbjct: 13 TKRYFNEILSQNSTQPV---EYYKAIDWNQVEDMIDKLTWEKLTEQFWLDTRIPVSNDLD 69 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 D++ L EK + TLLD++Q + + E F E++H++ Sbjct: 70 DWRTLSPAEKDVVGKVFGGLTLLDTLQSEEGASLMKDYVRTQHEEAVWNNIQFMESVHAK 129 Query: 122 SYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 SY+ I + + +F+ NE +Q +A+ I+ Y Sbjct: 130 SYSTIFSTLHTKAEIEDIFEWTNNNEYLQFKAKKINEIYQS------------------- 170 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 K ++ LE FY F + + A+II+LI RDE Sbjct: 171 ------------KDALKMKVASTMLETFLFYSGFFTPLYYLGNNKLANVAEIIKLIIRDE 218 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 ++H T T + + + E EE K Y+L ++ Q E + ++ +G Sbjct: 219 SVHGTYTGYKFQQGYNELSEQEQ----EEMKMWVYNLCLELYQNEVKYTQSIYDQ---VG 271 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 + + ++ Y N +Q +G D F T + P + + + + YL Sbjct: 272 WT-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFFSQVGNGYL 330 Query: 359 VGQIDSEVDTD 369 +G +++ D D Sbjct: 331 LGSVEAMDDED 341 >UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase small subunit 376L n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR2_IIV6 Length = 360 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 122/361 (33%), Gaps = 37/361 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 Y Y F +K W P EV + D D++ L ++++ + ++ T D Sbjct: 10 YKPFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVD 69 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + LP +PE+ + +A E +H +Y++++ + P + + + E++ Sbjct: 70 VASAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLETLG-MPEATYKEFLMYEEM 128 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + + I + D H + ++ + + + E + Sbjct: 129 KDKQDYIKKFSDS--------------RHILGKGEENLTTEDKEHIAAGIALFSGFTEGM 174 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + +FA F M+G +I+ DE H G + + + Sbjct: 175 QLFSTFAMLLIFPLNGFMKGMGQIVTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPS 234 Query: 268 ECKQECYDLFVQAAQQEKDWADYLF-----------------RDGSMIGLNKDILCQYVE 310 ++ Y + + E+ + D +F + GL L Y++ Sbjct: 235 VLQETVYKIAKEMVGLEEAFIDLVFKKYKDEPINDDNDLETKDNKDFFGLTPQRLKAYIK 294 Query: 311 YITNIRMQAVGLDLPFQTRS---NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 YI + R+ +G F NP+P + +++ E + Y Sbjct: 295 YIADRRLNLMGYKSIFNLEPYPTNPLPELE-IMINAPTHTNFFENRSTDYANVSTKGTWS 353 Query: 368 T 368 Sbjct: 354 E 354 >UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit beta n=504 Tax=root RepID=RIR2_MYCLE Length = 325 Score = 224 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 134/356 (37%), Gaps = 47/356 (13%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 V+ ++ + D ++ ++ FW PE+V VS D + L EK + + Sbjct: 10 DRVSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTASEKQLTMRVFTGL 69 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN--DPSVVFD 139 TLLD+IQG V+L+P P E AF E++H++SY+ I + + + F Sbjct: 70 TLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTAEIDEAFR 129 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 N +Q++A+ + YY + + Sbjct: 130 WSEENNNLQRKAKIVMEYYRGDEPLKRK-------------------------------V 158 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE+ FY F ++ R + A +IRLI RDEA+H + DD Sbjct: 159 ASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLVLVDD 218 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 E K+ Y+L + E ++ L+ + + + +++ Y N + Sbjct: 219 AR----RAELKEYTYELLFELYDNEVEYTQDLYDRVGLT----EDVKKFLRYNANKALMN 270 Query: 320 VGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL--VGQIDSEVDTDD 370 +G + F T NP ++ + + SSY+ + + D D Sbjct: 271 LGYEALFPRDETDVNP-AILSALSPNADENHDFFSGSGSSYVIGKAVVTEDEDWDF 325 >UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit beta n=111 Tax=root RepID=RIR2_BACSU Length = 329 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 143/350 (40%), Gaps = 37/350 (10%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 + A + + + D + + + FW PEE+ ++ D + ++ L ++E+ ++ L TL Sbjct: 5 YDAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTL 64 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSET-IHSRSYTHIIRNIVNDP--SVVFDD 140 LD+ QG + + + + + + A E +H++SY++I + + VF+ Sbjct: 65 LDTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEW 124 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 + N+ +QK+A+ I Y + ++ + L+ +++ Sbjct: 125 VKQNKYLQKKAQMIVGLYKAI-------------------------QKDDEISLFKAMVA 159 Query: 201 VNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 LE+ FY F F + + + +II LI RDEA+H + + + Sbjct: 160 SVYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIY----NK 215 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 + E E ++ DL Q + E ++ + L+ + + +++ Y N + + Sbjct: 216 QTEEKKAELREFAIDLLNQLYENELEYTEDLYDQVGL----SHDVKKFIRYNANKALMNL 271 Query: 321 GLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 G D F+ + P + L + ++ + Y ++ D D Sbjct: 272 GFDPYFE-EEDINPIVLNGLNTKTKSHDFFSMKGNGYKKATVEPLKDDDF 320 >UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR2_MIMIV Length = 417 Score = 223 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 72/371 (19%), Positives = 139/371 (37%), Gaps = 52/371 (14%) Query: 10 KNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPE 68 + +KEP+ + + KY + Q+ +W EEVD+++D D+ L + Sbjct: 93 NDVIMKEPILSLKSEQYTVH-PIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSD 151 Query: 69 HEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 +++ + L + D I + L+ ++ I E E E H Y+ ++ Sbjct: 152 DDRNFIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLT 211 Query: 129 NIVND---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 V D + + + I T I+K+A+ + + Sbjct: 212 TFVKDDALRNKLINSIKTMPSIKKKADWCNKWIKS------------------------- 246 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER--ELMEGNAKIIRLIARDEALHL 243 K L++ + +E + F SFA F R +M G + IARDE H+ Sbjct: 247 -----DKTYAHKLVAFSIVEGVFFSGSFASIFWLKTREMHVMPGLIISNQFIARDENKHV 301 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 M +LL + + + +I +E + + + ++G+N + Sbjct: 302 ELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFINDSL------------PCKLLGMNSE 349 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 ++ QY++Y+ + + +G F NP ++ V V+ E +Y ID Sbjct: 350 LMSQYIKYVADRLLVDLGYRKKFNVD-NPFEYMKKIDVF--VKANFFEKRNDAYSNANID 406 Query: 364 SEVDTDDLSNF 374 +E L NF Sbjct: 407 NEKKIVFLENF 417 >UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib beta subunit n=23 Tax=root RepID=A5VIB8_LACRD Length = 339 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 128/351 (36%), Gaps = 40/351 (11%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 +++ I + EK FW + V+ D D++ L + + Sbjct: 10 NQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRELDDDHQWTVGHVFGGL 69 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFD 139 TLLD++Q + AL + P + F E++H++SY+ I + + +F+ Sbjct: 70 TLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIKEIFE 129 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 T E +Q +A I++ Y + + + Sbjct: 130 WSDTEEYLQNKAVKIANMYLDPSQDPLKKK-----------------------------V 160 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE FY F + + A+II+LI RDE++H T + + + Sbjct: 161 ANVFLETFLFYSGFYTPLYYLGHNKLNNVAEIIKLILRDESVHGTYIGYKFQVGLRDRTE 220 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + ++ K Y+ + E+ + L+ +G D + ++ Y N + Sbjct: 221 KQQQDM----KDWMYNFLYELYDNEEKYTHLLYDQ---VGWT-DDVLTFIRYNANKALMN 272 Query: 320 VGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 +G D F T S+ P + + + + Y +G +++ D+D Sbjct: 273 LGQDPLFPDTASDVNPVVMNGISTSTSNHDFFSQVGNGYRMGAVEAMNDSD 323 >UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E3 Length = 309 Score = 220 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 69/334 (20%), Positives = 139/334 (41%), Gaps = 34/334 (10%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGR 90 K+ + ++++ + W P V+++ D Y L ++ +F L + + LD IQ Sbjct: 5 PMKHTWAKGILDRMENNTWFPHVVNMADDVASYNRLNAADRFMFDKALAFLSNLDGIQFN 64 Query: 91 SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKR 150 + N + ++ PE+ + A+ E +H +SY II + DP V+ + + ++ Sbjct: 65 NINQNIAKHVTSPEVSMCLSRQAWEEALHVKSYATIIETVSLDPMSVYMTFERDGLLAQK 124 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + I ++ + + + L +S LE + F+ Sbjct: 125 NQFILK------------------------QSRLLGEKFSAEGFALSCVSNVLLEGVYFF 160 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARD-EALHLTGTQHMLNLLRSGADDPEMAEIAEEC 269 F + A++ M G+A +IR I RD E HL HML+ LR D + Sbjct: 161 SGFLSFYLLADKGEMLGSADMIRYIQRDEEGTHLDLFAHMLDTLRHENKDV----FTQSF 216 Query: 270 KQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL-PFQT 328 + ++F+ +++ E W Y+ + + N + Y++++ N+R + + P+ Sbjct: 217 WNKALEVFLTSSEMEISWGKYITKGVT----NPKAIEDYIKHLANLRAEQIQAPFVPYPG 272 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 NP PW+ + + + E V+ Y VG Sbjct: 273 VKNPFPWVEQFSKPNTSEKNFFETRVTDYKVGGA 306 >UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diphosphate reductase small chain n=2 Tax=Hydra magnipapillata RepID=UPI00019243CE Length = 363 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 69/381 (18%), Positives = 139/381 (36%), Gaps = 55/381 (14%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + Y + K D +E + V + K+ + L +KQ +W EE+D S DR Sbjct: 25 LEYDANDEKKKDSEEEILNKDLSRLVVKPINSKHKVIWDLYKKQKDAYWTAEEIDFSNDR 84 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 D+ + ++ +H L + DSI + L I++ E E E HS Sbjct: 85 HDFLKVDKNIQHFIKRILAFFAGADSIVNINIKKKLSK-ITVKEAEIAYGFQQMMEDTHS 143 Query: 121 RSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 Y ++ I+ DP + + T I++ + + + Sbjct: 144 EVYADMLIKIITDPVERDELINAFKTVASIKRMIQWAQRWINS----------------- 186 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE---RELMEGNAKIIRL 234 K+++ ++ E + F +FA + + ++M+G + L Sbjct: 187 -------------KRRIGYSIVVFCIFEGLMFSGAFAGIYWLKKILGEDIMKGLIQSNNL 233 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 IA+DE +H + + E+ E+ +E + C A Sbjct: 234 IAKDEGMHTIFGCVIYTFIIYRLSFEEICELMKEAVEICKSFTKDAI------------C 281 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR-SNPIPWINTWLVSDNVQVAPQEVE 353 MIG+N +++ Y+EY+ + M +G + F T+ + +++T + + E Sbjct: 282 VDMIGMNVELMYNYIEYVADRLMVYLGYEKIFMTKIPDQFQFMDTIGFLN--KDNFFERR 339 Query: 354 VSSYLVGQID---SEVDTDDL 371 + Y D ++ + L Sbjct: 340 ATEYQKAYNDRNRADWNFKLL 360 >UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain 2 n=7 Tax=Saccharomycetaceae RepID=RIR4_YEAST Length = 345 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 128/372 (34%), Gaps = 54/372 (14%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 K + E + + KY +K + FW EE+++++D D+Q L Sbjct: 17 DMKEAEKDEILLMENSRRFVMF-PIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLT 75 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + +K + L D++ + + PE +++ E I+S Y+ ++ Sbjct: 76 DDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMV 135 Query: 128 RNIVNDPSVV--FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 DP + F +I +++ +A I + Sbjct: 136 DAFFKDPKNIPLFKEIANLPEVKHKAAFIERWI--------------------------- 168 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 L++ A E I ++A F ++++M G A R I RD + Sbjct: 169 --SNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDF 226 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 + + LR+ + + +A + EK++ G++ + Sbjct: 227 SCLLFAHLRTKPNPK-----------IIEKIITEAVEIEKEYYSNSLP-VEKFGMDLKSI 274 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID-- 363 Y+E++ + +Q G + + NP ++ V+ + E +VS Y Sbjct: 275 HTYIEFVADGLLQGFGNEKYYNA-VNPFEFME--DVATAGKTTFFEKKVSDYQKASDMSK 331 Query: 364 -----SEVDTDD 370 E++ DD Sbjct: 332 SATPSKEINFDD 343 >UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subunit n=4 Tax=Aquificales RepID=C0QUH3_PERMH Length = 329 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 139/328 (42%), Gaps = 21/328 (6%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGR 90 +Y +F+++ KQ W PEE+++ +D +DY++L EK +F +++ Y + + Sbjct: 21 NPRYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKSLTPTEKDLFDTSVGYFASSELLVQN 80 Query: 91 SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKR 150 P+++ P + T F E IHS + I+ D +++ + ++ + ++ Sbjct: 81 VLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTFEMDRKRIYNITLEDKLLMEK 140 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 E I D + GK +L K+ L L++ E + FY Sbjct: 141 QELIIRAVDRITY----------------GKADPDTLEGKKQILTAILLNNIIQEGMFFY 184 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 +FA FA + M+ + LI DE+LHL + + + E+ Sbjct: 185 SAFAHFFAMKDTGKMKNVVSGVELILIDESLHLQNGIEAILTIVEENPEIVD---DEKFV 241 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS 330 + + + A + E ++ F ++ G++ L +Y++YI + R++ +G D F+ Sbjct: 242 ENIKETIIDAVELELNYLKTKFGGTTIFGVSYKELEKYMKYIADRRLEELGFDPQFKIDQ 301 Query: 331 NPIPWINTWLVSDNVQVAPQEVEVSSYL 358 NP+ ++ V EV + Y Sbjct: 302 NPLKFLQKEDV--KKLTNFFEVSSTEYT 327 >UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chain n=4 Tax=unclassified Myoviridae RepID=C5H7Q1_9CAUD Length = 357 Score = 217 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 82/362 (22%), Positives = 163/362 (45%), Gaps = 10/362 (2%) Query: 13 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKH 72 + P+F G + Y +L ++Q + W +E + R+D++++P Sbjct: 2 INQHPIFLGGERKTFDSLNKHYPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSG 61 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 + + LK+Q D+ +S A P IS T + + E +H+ +Y+ I+R + Sbjct: 62 VMLEILKWQWEADTQVAKSLAFAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIK 121 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +P + D+I N +Q R + ++ +EL++ + L + K Sbjct: 122 NPETILDEINQNVAVQDRLKTVNRVLEELLDEGINYRLSYVRDSL-----LDKDPLHFHK 176 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + L +V ALE I F SFAC+FA ++ +G A+ ++ I DE LH + + Sbjct: 177 VILKGLFAVTALEGISFMASFACTFALDAQDKFQGIAQAVQKIMLDEILHTK---IDIEV 233 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLNKDILCQYVEY 311 L+ D E + ++ E + + + E+ W+ Y+F +G +++GLN +L ++V Y Sbjct: 234 LKETLRDDEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAVVGLNTKLLHEWVYY 293 Query: 312 ITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 G+ F + P+ ++ + D Q A QE + +YL+ + ++++ Sbjct: 294 NAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGAYLLNTVVDDLNSGF 353 Query: 371 LS 372 L Sbjct: 354 LE 355 >UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ8_9CAUD Length = 346 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 125/359 (34%), Gaps = 47/359 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP-EHEKHIFISNLKYQTLLDSI 87 Y Y F L+ K W +E ++ D D++ + E+ L T D + Sbjct: 17 YKPFLYQEFYDLMTKHEDAHWVKQEAELGDDVNDWRNRSSDDERSFIKEILTVFTQGDVV 76 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + +P E+ W+ A E IH +Y P +F +++ Sbjct: 77 VADNYKSIFIPAFKNNEVSNWLVGVAAREVIHQDAYAMANETFGL-PDSMFGRFREYQEM 135 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 ++R + +++ YD + + L + L+ E + Sbjct: 136 RERNDLMATQYD----------------------------PSMVEGLAMGLVHTTFNEGV 167 Query: 208 RFYVSFACSFAFAE---------RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD 258 +FA F R +G KI + RDE +H+ G+ + + Sbjct: 168 CLMGAFANLLQFNRFDVPGFNGYRGRYKGLTKINKWSLRDEGIHVEGSSLLYRKVMGEHP 227 Query: 259 DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQ 318 + +E K++ YDL E + D F+ + + KD YV Y+ N R+ Sbjct: 228 ----WLMTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLT-MTKDESKAYVRYMMNRRLL 282 Query: 319 AVGLDLPFQTRSNPIPWINTWLVSDNVQ--VAPQEVEVSSYLV-GQIDSEVDTDDLSNF 374 +G F+ + P PWI L + E V +Y G + E+D ++ Sbjct: 283 QLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQASGALVGELDWSKVNQL 341 >UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bacillaceae RepID=B1HSG7_LYSSC Length = 318 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 130/349 (37%), Gaps = 39/349 (11%) Query: 26 VARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLD 85 +++ ++ + ++Q W PEE+ VS+D +++ + + TLLD Sbjct: 4 AVNWNKATSELAQIFWDQQWKQIWFPEEIAVSKDIQQWKSF--EHQDTYKKVFAGLTLLD 61 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP--SVVFDDIVT 143 ++Q + + + + + E IH++SY++I + + +F+ + Sbjct: 62 TVQTNIGMNRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWVKK 121 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 NE +Q +A I+ Y+ + E + L+ + S Sbjct: 122 NEYLQYKANKIADIYNSIEEG-------------------------DAESLWKAMFSSVM 156 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 LE+ FY F + + +A+II LI RDE++H L + Sbjct: 157 LESFLFYSGFFYPLYLGGQGFLRNSAEIISLILRDESIHGVAVGFFAQNLYKQFSKEKQ- 215 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 E + Y+L + Q E + + ++ + + + YV Y N + VG + Sbjct: 216 ---EALQLWGYELLLDLYQNEMKYTEDIYAETGL----SPEVKAYVRYNANKALMNVGFE 268 Query: 324 LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 F P + + ++ + ++Y ++ + + D + Sbjct: 269 AMFP-EEEVNPIVMNGIRNEGSTYDFFSQKGATYAKAKV-APITDDTFN 315 >UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=UPI0001976997 Length = 347 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 78/375 (20%), Positives = 162/375 (43%), Gaps = 39/375 (10%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 F++ ++ + F + +D ++ +LI++ FW P+EV +S+D++ Sbjct: 7 QVRVFNENLPNKGER--MFDDVSGILFWDDIINQVYYELIKEMREVFWIPDEVSMSKDKV 64 Query: 62 DYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + + E E+ +F++ + +LDSI + I ++ + A ETIH+ Sbjct: 65 QWATEMNEMEQELFLNAIGILAVLDSIAT-YFDNVAAYYIRDSAIKALMAFVAAMETIHN 123 Query: 121 RSYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 SYT+I+ ++ + VF+ NE + +R + + +DE I+ + Sbjct: 124 ESYTYILSSVSSKAVSLDVFERPKKNEFMIRRNKLMMDLFDEFIQNPT------------ 171 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++++ LE + F F + F M G +I+ I RD Sbjct: 172 ------------PETFAKGLVAMSGLEGLCFVNGFTPFYHFNRNGKMFGTGTVIQYIQRD 219 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H ++ + + + EE + YD F + Q E+++ + L+++ Sbjct: 220 EMKHSYFQTILVRDILTQYPE----LNTEEFSEFVYDFFTELVQLEREFCEDLYKNTP-- 273 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTW--LVSDNVQVAPQEVEVSS 356 ++ + + +Y+ Y N+ + +GLD F + NP+PWI + +N + E + + Sbjct: 274 DIDIEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKRDFFEDKEVN 333 Query: 357 YLVGQIDSEVDTDDL 371 Y + + D DDL Sbjct: 334 YGKAN-EQKNDWDDL 347 >UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=C7NA19_LEPBD Length = 335 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 71/349 (20%), Positives = 134/349 (38%), Gaps = 34/349 (9%) Query: 26 VARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLD 85 ++ + D E E+ L FW E S+D + +L K ++ L TLLD Sbjct: 8 AVNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVLGGLTLLD 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIVT 143 ++Q + ++ I + + + ETIH++SY+ I + + F + Sbjct: 68 TLQSHTGMPKIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWVQE 127 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 N +Q +A I +YY ++ + K+ + + L + Sbjct: 128 NPHLQYKANKIDTYYQKM-----------------------NNPEASKRDIAMALAASVY 164 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 LE FY F A + M + II+ I DE++H + L + + E A Sbjct: 165 LETYLFYSGFFLPLWLAGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKA 224 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 ++ E K+ YDL + E + D ++ D + G + +Y+ Y N + +G + Sbjct: 225 DMRAELKKLMYDL----YENETRYTDEIYGDLGLTG----NVKEYIRYNANKALMNLGFE 276 Query: 324 LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 F+ + N P + L + Q + ++Y + DD Sbjct: 277 EEFEVK-NVNPIVLNGLNVETTQHDFFSKKSTNYEKALEVVHLHDDDFK 324 >UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6V3_SULNB Length = 337 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 72/372 (19%), Positives = 146/372 (39%), Gaps = 44/372 (11%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 ++ + L E ++ G P +++ KY + + + W P EV+ S ++ +++A Sbjct: 7 YNPQGEEILDEKIYGGSPTGFVDFNRSKYRWDSNIYDLMNANTWFPSEVNTSTEKKNFEA 66 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L ++E+ I+ + DS Q L + +++ + E HS+SY Sbjct: 67 LTDNEQSIYKMTFAQLSFNDSAQ-EEYLSDFRRLANNRLVKSVISLQIMQEVNHSKSYAV 125 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 ++ + VF+ + + K+ ++ + + I+ S Sbjct: 126 LLDA-CGNSEEVFNLYKYDAALNKKNLQVAEQFAKYIDGGSA------------------ 166 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE-ALHLT 244 K+ L M+ LE I F + F+ + + + G +I+ IARDE HL Sbjct: 167 ------DKMLLSAMASVNLEGIYFLLGFSYIYLLG--DKVPGARDMIKFIARDELNTHLP 218 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 ++ ++ + IA Y + A + E ++ YL ++G+ ++ Sbjct: 219 LFANIFKTIQKENN------IATSTIDAAYKMIQDAVKIELEYGHYLLDQFPIMGVTHEL 272 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPI--PWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + Q V N R++ +GLD F + + L + V+ E VS+Y I Sbjct: 273 MEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKSNFFESNVSNYAKSSI 332 Query: 363 DSEVDTDDLSNF 374 DL++F Sbjct: 333 -------DLNDF 337 >UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystivirus RepID=Q678G9_9VIRU Length = 374 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 131/355 (36%), Gaps = 42/355 (11%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--ALPEHEK 71 LK +F Y Y +L + W +E+ ++ D D++ L + EK Sbjct: 60 LKRRLFEYNAS----YKPFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEK 115 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 L+ T LD G+ + +P+ E+ + ++A E H ++Y + + Sbjct: 116 KFITQILRLFTQLDVSVGQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDTLG 175 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 P + + +Q+ + + +S + I Sbjct: 176 L-PESDYSAFLKYKQMTDKTDFMSDMRTDTIG---------------------------- 206 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 + L+ E + + +F F +M+G K++ RDE +H+ G + Sbjct: 207 -NVAFSLVKAVYNEGVSLFAAFVMLLNFQRFGVMKGMGKVVEWSIRDENVHVEGLCKLFK 265 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + S + ++ + L + + E + D +F + + L + + YV+Y Sbjct: 266 TIVSEYP----FILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKNLKRVDVINYVKY 321 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 I R +GL + NPI W+ +WL+S E V+ Y VG ++ + Sbjct: 322 ILQRRTVQLGLSNKTDLQ-NPILWV-SWLISGRDVTNFFENRVTEYDVGGLEGDW 374 >UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Deinococcus RepID=Q1IXG4_DEIGD Length = 319 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 118/349 (33%), Gaps = 44/349 (12%) Query: 23 PVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQT 82 + + + + +Q + W EE+ ++ D D++AL E+ + Sbjct: 2 SKSATNWSEVGDGFTQAFYIQQQAQLWFSEEIPIASDAADWRALSPAERTCYTRVSAGLN 61 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV--NDPSVVFDD 140 +D++QG L + + + +AF E +H+RSY+ + + ++ F+ Sbjct: 62 AMDTLQGEVGMPLLAAGEDDHQRKATLAMFAFMENVHARSYSMANKTFLSASEEREAFEW 121 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 I +Q++ Y+E +++ Sbjct: 122 IEMQPHLQRKITVFRRLYEEGDA-------------------------------LTRMLA 150 Query: 201 VNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 LE FY F A + M ++ LI DEALH + + + Sbjct: 151 SCLLETALFYSGFFYPLYLAGQGKMSHMGEVFTLICADEALHGSYVGLLFQERFAALPQG 210 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 E A + +Q L + + E + D ++ + + + +V Y NI + Sbjct: 211 EQAAVRARFEQ----LAREFYENECAYTDEVYAEVGL----ASEVKTFVRYNFNICCDNL 262 Query: 321 GLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVS-SYLVGQIDSEVD 367 GL+ F NP+ +N + ++ + Y + D Sbjct: 263 GLERLFPEEEVNPL-VLNGIRATGGTTHDFFSIKGAGGYAKITAEPLTD 310 >UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0JA50_BLASP Length = 357 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 126/350 (36%), Gaps = 36/350 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLD 85 + +Y + KQ + W E+++ D D+ L + EK++ LK + Sbjct: 8 LNFKPFEYQWAYEYWFKQQNAHWLHTEINMQSDIYDWNKNLTDQEKNVIGDILKGFAQTE 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 + G + + IPE++ + + ETIH+ +Y+++ + D F + ++ Sbjct: 68 TEVGNYWSEMIPKWFPIPEIKMMGQAFGSFETIHAAAYSYLNDILGLD---NFHAFLEDD 124 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I + + + + ++ + A E Sbjct: 125 VIMNKLKSLMDV-----------------------RNSDHGKYNKEEIARSVALFSAAAE 161 Query: 206 AIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 ++ + SFA +F + ++G + I RDE+LH + + Sbjct: 162 GVQLFSSFAVLLSFRKSNRLKGVGQQIIFSVRDESLHSEAGCKIFRTFCEENK-----GL 216 Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 E ++ Y A + E + D +F + + ++ L +++ N++++ +G Sbjct: 217 KEIVERSVYHGVDLALKNEFVFIDKIFGGRDLCTIKREELKNFMKDRANMKLRELGFFDS 276 Query: 326 FQTRSNPIPWINTWL--VSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSN 373 + + +N + +S Q + + Y + + + D S+ Sbjct: 277 YHVDRRMLDNMNWFYITISGEQQTDFFDNRETGYSK--PNEDWNEDLFSS 324 >UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9V1_HYDS0 Length = 319 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 134/327 (40%), Gaps = 35/327 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSI 87 D Y L K + +W PEE D++ D+ ++ + L + E+H + + + + + Sbjct: 25 LDSVVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGW 84 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 G++ + I E ++ E H ++ +I+ + P V+ ++I Sbjct: 85 VGQNILE-ISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLDLKPHEVYAMHENVKEI 143 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +++A+ L E + +L+ + + LE + Sbjct: 144 KRKADFEVKRAMALCEEPTEENLIED-----------------------IFVYYAILEGL 180 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 F+ F AF R +++ A ++R I +DE HL ++LN L + Sbjct: 181 FFFSGFVTPLAFGRRGVLKNVAALVRWILKDETRHLAFGIYLLNELLKDKNK-------N 233 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 + K + L +A E ++A + +IGL+ + YV+Y+ + RM+++G D + Sbjct: 234 DYKDKFRVLMEEAVDIETEYARVAMPE-KIIGLSFETYTSYVKYLADRRMRSLGFDAIYG 292 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEV 354 + NP+ W+ T ++ E +V Sbjct: 293 -QKNPMKWLTTQTDLPDL-TNFFEAKV 317 >UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta subunit n=83 Tax=root RepID=Q5HMW6_STAEQ Length = 340 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 70/368 (19%), Positives = 141/368 (38%), Gaps = 43/368 (11%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 M +D+ I ++ + W EE S+D ++ L E+ ++ Sbjct: 1 MTREIKARATNWDK-DNSIALTYWKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKA 59 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV 137 L T LD+ QG L + E IH +SY+HI +++ Sbjct: 60 LSGLTGLDTTQGTEGMPLLAFHYPEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTH 119 Query: 138 F---DDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 + + + N+ + K+ + I++ Y +L++ +++ Sbjct: 120 YYLKEWVPANKYLNKKTKLITTNYYKLLK-----------------------PNPTDREI 156 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 Y+ + S LE+ F+ F A + M + +IIR I DE +H +GT + ++ Sbjct: 157 YVAMASSIFLESFLFFSGFYYPLYLAGQGKMVHSGEIIRKIILDETIHGSGTGYAAQVIF 216 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 E +I +E +LF Q E ++A L+ + + + +Y++Y N Sbjct: 217 DKFSKEEQEDIRKEL----MELFDQLYFNEVEYAASLYDKLGLT----EDVIRYIQYNGN 268 Query: 315 IRMQAVGLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVG-----QIDSEVDT 368 + +G + F NPI + L +D V+ Y + D + D Sbjct: 269 RALMNLGWETVFNPEPFNPI--VENGLRTDTTNHDFFSVKGDGYTLALNQVPLRDKDFDF 326 Query: 369 DDLSNFQL 376 +++ +++L Sbjct: 327 NNVISYEL 334 >UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain n=1 Tax=Escherichia phage rv5 RepID=B3RGP5_9CAUD Length = 362 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 89/364 (24%), Positives = 166/364 (45%), Gaps = 15/364 (4%) Query: 11 NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 + P+F GQ + + +KY +L +KQ W +EVD+S+ D+ + Sbjct: 11 HKTGDYPLFLGQQMGMYDSINKKYPQLFELYKKQKEQDWAEDEVDLSQSISDFVTCSKST 70 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 + + L +Q DS+ RS P I+ EL T + + E +H+ +Y+ I+R Sbjct: 71 YDVMVQTLMWQWEADSVAARSIICLFSPFITNSELFTLLMKQSEIEVLHALTYSEIVRQC 130 Query: 131 VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 + + + ++I N+ + R+ I Y EL + + + L + + Sbjct: 131 LPNAREIIEEIQENQNVLSRSGVIVKYMQELEVIGAKYRLDPSSVKEDIVRKCILRALFA 190 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 L E+I F SFAC+FA AE+ + A++++ I DE LH G ++ Sbjct: 191 LLAL----------ESIEFIASFACTFAVAEQGIFVQVAQLVQKIMLDEMLHSKGDFAII 240 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLNKDILCQYV 309 ++L + DP + E K E ++ + +E W+DY+F +G ++IGLN +L ++V Sbjct: 241 DILLN---DPAWEKSFLEIKGELKEILDEVRTKEYGWSDYIFSEGRAIIGLNSPLLKEWV 297 Query: 310 EYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 +Y + G+D F +P+P++ W+ Q A QE+ + Y V ++ + Sbjct: 298 DYNCSPIYDYYGIDKDFVPPTKDPLPFMQVWMKPSLQQTANQEMSNTDYRVNTTVNDAEE 357 Query: 369 DDLS 372 + Sbjct: 358 EIWE 361 >UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Bacteria RepID=A1XG51_BORHD Length = 321 Score = 201 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 123/355 (34%), Gaps = 38/355 (10%) Query: 20 FGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLK 79 Q +++ + ++ + FW EE+ +S D++ + L E+ ++ L Sbjct: 1 MKQNREAINWNRLNNSYTKMFWDQNIRQFWVDEEIPISDDKLVWNTLDGEERDVYEKVLG 60 Query: 80 YQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVV 137 TLLD+ QG L I + + + E +H++SY+ I ++ ++ + Sbjct: 61 GLTLLDTEQGSVGMPRLALAIDNLDYKPVLGFMGAMEHMHAKSYSSIFSSLSNIDRIDHI 120 Query: 138 FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 F + T Q + + I Y+ + + LY Sbjct: 121 FGWVKTYRNFQDKLDLILGKYNSI---------------------------HDRMSLYKA 153 Query: 198 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 L + LE FY F A + M + +II LI RDE++H + + Sbjct: 154 LCTSVFLETFLFYSGFFYPLYLAGQGKMVNSGEIINLILRDESVHGVFVGLLAQEEFNKM 213 Query: 258 DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRM 317 E ++E + + E + L+ + G + +V Y + + Sbjct: 214 TFKEQ----AFAQREATLILERLYYLESAYTKDLYSSIGLEGA----VDVFVRYNADKAL 265 Query: 318 QAVGLDLPFQT-RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 +G D F + P + L ++ + + Y+ + DD Sbjct: 266 MNLGFDSAFNIRDIDVNPLVLNGLRTNTKTHDFFSTKGNGYIKPMRVEPLQDDDF 320 >UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7_9CAUD Length = 387 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 81/392 (20%), Positives = 158/392 (40%), Gaps = 35/392 (8%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + F+ K+D + G + Y +L ++ W E D S Sbjct: 7 LPKKIFNVAKSDYHLPEIILGDDPGLLDSIHTHYPKMWELYKRLKMLDWDELEFDFSTCL 66 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 ++++ + + I L +Q DS+ RS L P+++ + +E +H+ Sbjct: 67 VEFETCDKSTYDMMIKTLAWQWEADSVASRSIVNILSPVMTDSRVWAGYVRINDNEDVHA 126 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 +Y+ I+RN DP V+ D+I+ E+ Q+R ++ E + + L Sbjct: 127 LTYSEIVRNSFKDPKVILDEILRVEEAQERMVAVARTMGEAHDAVHAYAL---------- 176 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE- 239 + +EL K+++ +++ LE I+F SFA +FA + A ++ IA+DE Sbjct: 177 -NQVPNDQELYNKVFMFFIALYFLERIQFMASFAVTFAIGRTGAFQQIAAAVKKIAQDEF 235 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMI 298 +H Q ++ L +CK + +L + + E W +YLF +G + Sbjct: 236 EIHAQYGQEVIRAL---LATERGKLAYSQCKDKIIELLWEIVKTEVTWINYLFSEGRELT 292 Query: 299 GLNKDILCQYVEYITNIRMQAV------------------GLDLPFQTRSNPIPWINTWL 340 G+N L +V + N + G D + NP+ ++ +L Sbjct: 293 GVNATKLINWVLFNANAAATFLSIENDVVEQYQVEFKESAGFDFVWP-EKNPLLYMEDYL 351 Query: 341 VSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + Q +PQE E Y+V ++ + ++ Sbjct: 352 DISSTQASPQEEEKPDYMVNVVNDVGEEEEFE 383 >UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Bacteria RepID=RIR2_MYCGE Length = 340 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 68/374 (18%), Positives = 134/374 (35%), Gaps = 44/374 (11%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 F ++ + F + ++ + ++ + + FW PE++ VS D Sbjct: 6 KKYFLESFSPLGYVKNNFQGNLRSVNWNLVDDEKDLEVWNRIVQNFWLPEKIPVSNDIPS 65 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 ++ L + + + TLLD+IQ ++ + + +AF +H+RS Sbjct: 66 WKKLSKDWQDLITKTFTGLTLLDTIQATIGDICQIDHALTDHEQVIYANFAFMVGVHARS 125 Query: 123 YTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Y I + + + +V E +QKRA+ + YY + S Sbjct: 126 YGTIFSTLCTSEQINAAHEWVVNTESLQKRAKALIPYYTGNDPLKSK------------- 172 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 ++ + Y F F + R+ + + IIRLI RD+ Sbjct: 173 ------------------VAAALMPGFLLYGGFYLPFYLSSRKQLPNTSDIIRLILRDKV 214 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 +H + + +E K ++L + + EKD+ L+ ++ Sbjct: 215 IHNYYSGYKYQRKLEKLP----LAKQKEMKAFVFELMYRLIELEKDYLKELYEGFGIV-- 268 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVS-DNVQVAPQEVEVSSYL 358 D ++ Y +Q +G D PF + P I L + + SSY+ Sbjct: 269 --DDAIKFSVYNAGKFLQNLGYDSPFTAAETRIKPEIFAQLSARADENHDFFSGNGSSYV 326 Query: 359 VGQIDSEVDTDDLS 372 +G + E + DD + Sbjct: 327 MG-VSEETNDDDWN 339 >UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Brachyspira RepID=C0QY28_BRAHW Length = 356 Score = 194 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 19/358 (5%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 E +FFG + R D +++ KL E W +EVD D+ + +LPE + F Sbjct: 12 NEKIFFGDFGHYLRIDSVSHEVARKLKEASEGNTWFSKEVDYKSDKTRFSSLPEDAQRAF 71 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV-ND 133 N+ YQTL+DS + L +++ A E IH+ SY++ + + ++ Sbjct: 72 KLNIAYQTLMDSGVTSGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHE 131 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 + D + +E ++ R E L G N + +L E K+ Sbjct: 132 ATDTLDLVYNDEFVKHRME-------------KEVELFGNVDELCNLENSPATLDEKKQA 178 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAER--ELMEGNAKIIRLIARDE-ALHLTGTQHML 250 + L+ + LE+++F SF +F + G K I+LIA DE H+ ++++ Sbjct: 179 VLKLLIGIYLLESVKFPFSFLVTFTINNNYDNAIAGFTKTIKLIAHDELNTHVPTGKNVM 238 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQ-AAQQEKDWADYLFRDGSMIGLNKDILCQYV 309 N+LR + E + +E WA YLF + G+N + ++ Sbjct: 239 NILRKENEQGFTHLFKSGWFNETARAMAEFTVNEEIKWAKYLFDGYQVAGINSSVSEHFI 298 Query: 310 EYITNIRMQAVGLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 +Y +R++ +G++ P+ + + I W N++ + A QE +SY G + +++ Sbjct: 299 KYWAGVRLRDLGVESPYNEKKSDVIDWFNSYRDINKQNAALQETTNTSYQKGALKNDL 356 >UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TFJ9_VANPO Length = 351 Score = 193 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 118/345 (34%), Gaps = 49/345 (14%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--A 65 + K Q E + + KY +K+ + FW EE+D S+D ++ Sbjct: 18 ELKELQKDESILTENKRRFVLF-PIKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDK 76 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 + + EK FI L D + + L PE + + + IH Y Sbjct: 77 ITKDEKEYFIRLLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGI 135 Query: 126 IIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +I ++V D +F++I I+++ E S+++ Sbjct: 136 LIDSLVKDDEKRTSMFEEIKDLTNIKEKIEYAKSWFE----------------------- 172 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L++ A+ I ++ +F + L+ G + + RD LH Sbjct: 173 ------NEDNLFGEKLIAEAAVLGIFSLSAYVSVLSFQKGGLIPGFVTGVDNMLRDRGLH 226 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 + M L++ D + + V A + EK + L Sbjct: 227 VDFCCLMYAHLKNQID-----------SEIVQKIIVDAVEIEKKSLLKALPIIKV-NLKI 274 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQV 347 D + Q++EY+ + + A G + + NP ++ ++ N Sbjct: 275 DEMNQFIEYVADSILVAFGNEKHYNAT-NPYEFMENVVLPGNTNS 318 >UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436B Length = 322 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 125/342 (36%), Gaps = 37/342 (10%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGR 90 Y + + Q S FW +E++V +D D + + E E H I+ L+ TL + + GR Sbjct: 13 FDYPEAIQFAKVQSSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLFTLYELVAGR 72 Query: 91 SPNV-ALLPLISIPELETWVETWAFSE-TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + +L P++E T+ F E +H+ Y I ++ + + V + ++ Sbjct: 73 DYWLGRVLKTFPRPDIERMAATFGFFELNVHAPFYNKINEALMLNTDEFYLAYVNDPILK 132 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 +R E + S +E L + + +E Sbjct: 133 ERMEFVDSLVEEDDP-------------------------------LYSLGAFSMVEGAV 161 Query: 209 FYVSFACS--FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 Y SFA F + + + I RDE LH G + N L+ E I Sbjct: 162 LYSSFAFLKHFQAKGKNKLMNVVRGINFSVRDENLHCEGGAWLYNTLKQEI-KSEGGYIN 220 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + + A+ E D +F G M G+ + + +V+ NI + +G++ F Sbjct: 221 PNLEYDLANCAHTIAEHEFRIVDMIFEKGEMEGITAEQMKTFVKSRVNICLAQLGIEPVF 280 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 + +N + ++ + +SY + + Sbjct: 281 EVSNNIVAEWFYDGINGVMFHDFFSGIGNSYNRSWDEKGFNW 322 >UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P4N2_FUSNV Length = 245 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 28/248 (11%) Query: 3 YTTFSQTKNDQLK-EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 F+ +D L + G N+ + +Y +L ++ FW PE+VD+++D+ Sbjct: 8 KKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 67 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY+ L E+ + L + LDSIQ + + ++ PE+ + F E IHS+ Sbjct: 68 DYENLTVPEREAYDGILSFLIFLDSIQTNNI-PNISDHVTAPEVNLLLAIQTFQEAIHSQ 126 Query: 122 SYTHIIRNIVND--PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 SY +II +I+ +++D ++ + +R I+ Y + I+ Sbjct: 127 SYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFID---------------- 170 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 + + +++ LE++ FY F + A R M G + IIRLI RDE Sbjct: 171 --------EQSDENFAKVIIANYLLESLYFYNGFNFFYLLASRNKMVGTSDIIRLINRDE 222 Query: 240 ALHLTGTQ 247 H+ + Sbjct: 223 LSHVVLFR 230 >UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), beta subunit n=6 Tax=Bacteroidetes RepID=C6X1E6_FLAB3 Length = 324 Score = 187 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 136/348 (39%), Gaps = 39/348 (11%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 Y +Y + +E FW EVD + D D+Q+ L HEK+ + L ++ Sbjct: 10 YKPFEYPEIMQFVEAINKSFWVHSEVDFTADVQDFQSQLEPHEKNAVKNALLAIAQIEVS 69 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 ++ L + PEL T+A E HS +Y+ ++ + + F+ +V I Sbjct: 70 V-KTFWGNLYNHLPKPELNGLGSTFAECEFRHSEAYSRLLEVLGYN--DAFNHVVEIPAI 126 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +KR + +S+ + K+ + L+ +E + Sbjct: 127 KKRIDFLSNVLKH------------------------ANSTTPKEYVSSLLLFSILIENV 162 Query: 208 RFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + FA +F + M+ + II + DE +H +++N +R D + Sbjct: 163 SLFSQFAIILSFTRFKGYMKNVSNIIAWTSVDEQIHANAGIYLINKIREEQPD----LLT 218 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + ++ Y L + + E + D++F G + ++K+ L +++Y + ++ +G+ + Sbjct: 219 DSDIEDIYTLVDHSIELEAEILDWIFEMGEIDNVSKENLLNFMKYRVDDSLKKIGMQTRY 278 Query: 327 QT---RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 P+ W + ++++ Y D + +DL Sbjct: 279 NVSGDEYRPMVWFEEEVFANSM-DDFFAKRPVDYTKH--DKSITENDL 323 >UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=Q19CR4_9CAUD Length = 332 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 113/345 (32%), Gaps = 39/345 (11%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQG 89 KY F KL ++Q+ FW +E V D D + L E + + LK T+ + G Sbjct: 18 IIKYPEFGKLADEQMHAFWPWDEPVVDNDIQDLRTKLTPGELNGITTVLKLFTIYERKVG 77 Query: 90 RSPNV-ALLPLISIPELETWVETWAFSETI-HSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + PE+ ++ E H+ Y + + D + +E++ Sbjct: 78 EDYWSGRIAHTFGRPEINRMATLFSAVEGNSHAPFYNKVNEVLYLDDEAFYTSWKESEEL 137 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +R + + ++ + + +E Sbjct: 138 SRRIQFVGKSVNDPDD-------------------------------AKSFAAFTFIEGA 166 Query: 208 RFYVSFACSFAFA----ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 Y SFA F ++LM + + L DE H G + L + Sbjct: 167 VLYSSFAFLKHFQAQECGKDLMRNICRGVDLSVADEHHHSIGGAMLFQTLCREMKEKYGE 226 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 ++ + K + ++ Q E D +F + + G+ D L +V+ N+ ++ +G + Sbjct: 227 DVRAKLKNDIINMARQVFDHESGIIDLVFAE-PIDGITADELRVFVKSRINLCLENLGYE 285 Query: 324 LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 F+ +NPI ++ S Y + Sbjct: 286 PIFEIENNPIADWFYRTINAKKFHDFFTGSGSEYNINWNREGFSD 330 >UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 Tax=Caenorhabditis elegans RepID=Q20993_CAEEL Length = 500 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 33/224 (14%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 EP+ + + + +K ++ FW EEVD+ +D ++ L E+ Sbjct: 307 EPLLAPNNNRFVVHPIV-HRDIWEFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFIS 365 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 S L + D I + + + E + E IHS Y ++ + D + Sbjct: 366 SILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDA 425 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +F+ I T + I+ +A+ + + Sbjct: 426 ERNILFNAITTFKFIKAKADWCLRWISDHNAP---------------------------- 457 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 L +V A+E I F SFA F +R L+ G LI+ Sbjct: 458 -FSERLAAVAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELIS 500 >UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome shotgun sequence. (Fragment) n=2 Tax=Euteleostomi RepID=Q4TC55_TETNG Length = 369 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 4/147 (2%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + +Y ++ +K + FW EEVD+S+D +++L + E+ Sbjct: 1 EEPLLKENPRRFVIF-PIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFI 59 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + + E + E IHS Y+ +I + +P Sbjct: 60 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEP 119 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYY 158 S +F+ I T ++K+A+ ++ Sbjct: 120 SEREYLFNAIETLPCVKKKADWALNWI 146 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 3/48 (6%) Query: 325 PFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 ++ NP ++ +S + E V Y + + + Sbjct: 320 IYRAE-NPFDFMEN--ISLEGKTNFFEKRVGEYQRMGVMAGAADNTFR 364 >UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Ostreid herpesvirus 1 RepID=RIR2_OSHV1 Length = 579 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 131/388 (33%), Gaps = 67/388 (17%) Query: 2 AYTTFSQTKNDQL---KEPMFFGQPVNVAR---------YDQQKYDIFEKLIEKQLSFFW 49 + + + ++ P++ G + Y K S W Sbjct: 35 QFEILNTSYDELTEFDDHPLYGGATDHHKDIVGKYDHALLKPAVYQQLRDFATKMESSSW 94 Query: 50 RPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWV 109 + E+D D ++ + E+E+ L + + D++ +PE + ++ Sbjct: 95 QQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKDRIA-IFADEFPLPECKDFI 153 Query: 110 ETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ-----IQKRAEGISSYYDELIEM 164 + +E +H R Y + + +V D + D + + I+K+ + + + Sbjct: 154 DWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPEFAPIKKKVDWLGKIISVENDS 213 Query: 165 TSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAEREL 224 ++ EAI F SFA F Sbjct: 214 R-----------------------------GEMVVGQVCTEAIMFAASFAILLKF-RAPY 243 Query: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284 M I RDE LH +L L+ D + +L +A + E Sbjct: 244 MRALVLGNEFIRRDETLHFRFYAELLRLMPDRPSD-----------ERIAELLTEATEIE 292 Query: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF-----QTRSNPIPWINTW 339 ++A+Y+ +G + + KD L Q+V+ TN + + ++ + +P+ ++NT Sbjct: 293 LEFAEYVVPEG-VKYITKDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNT- 350 Query: 340 LVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 + ++ E + + Y Q + + Sbjct: 351 -LESEQKINFFEGKATEYNTKQYKVDFN 377 >UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TLQ4_VANPO Length = 361 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 130/366 (35%), Gaps = 59/366 (16%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QA 65 + + Q KEP+ K+ +K+ + FW EE+D S D I++ + Sbjct: 31 LEVEESQSKEPILMENKSRFV-LMPIKFHTVYDGYKKREALFWPAEEIDFSHDIINWGKK 89 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNV-ALLPLISIPELETWVETWAFSETIHSRSYT 124 +H+K I +L + S+ G + + IPE + + E IH Y+ Sbjct: 90 ASDHDKSIIKKSLAFLCS--SVLGSFYLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYS 147 Query: 125 HIIRNIVNDPSVV---FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 I +V++ + F D+ + I+++ ++D+ Sbjct: 148 LAIDQLVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDK--------------------- 186 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 L++ +++EAI VSF + +++++ G I+LI +D + Sbjct: 187 --------ESSLFAEKLVAFSSIEAIFSLVSFFSIMSLEKKDIIPGLISGIKLILKDHIV 238 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H + + L+ D + +A + E + + + + + Sbjct: 239 HCDFQMSIYSELKKRLDPG-----------IIERIVTEAVEIELETLEDDYFNKQLDKET 287 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRS-----------NPIPWINTWLVSDNVQVAPQ 350 K + +EY+ + + G F + + N IP + + + + Sbjct: 288 KADIKNVIEYVGDRVLMGFGNQKHFHSANPYDNLEHECFENVIPKTESSDSQNTTKFSKT 347 Query: 351 EVEVSS 356 E +S Sbjct: 348 EKIAAS 353 >UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ5_FLAJ1 Length = 324 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 127/350 (36%), Gaps = 39/350 (11%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLD 85 Y +Y + E +W EVD + D D+ L EK ++L ++ Sbjct: 8 VNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHAHLSLAEKTAVKNSLLAIAQIE 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 +S + PE T+A E HS +Y+ ++ + + F+ ++ Sbjct: 68 VAV-KSFWGNIYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDE--FEKLLDVP 124 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I++R + +S+ + ++ +K + ++ +E Sbjct: 125 VIRRRVDYLSNVLKD------------------------TKSQDNRKYMVSLILFSILIE 160 Query: 206 AIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 + + FA +F + M+ + II + DE +H G +++N +R D Sbjct: 161 NVSLFSQFAILLSFTRFKGYMKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPD----Y 216 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 EE + + E D D++F +G + + K L ++++ + ++ + + + Sbjct: 217 FDEETLALVRETVKDSIAVESDILDWIFEEGEIESIKKGDLVNFMKFRIDESLKQINIPV 276 Query: 325 PFQT---RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 F + W + ++++ Y D + +DL Sbjct: 277 IFDVKVEDYKALAWFEEEVFANSL-DDFFAKRPVEYTKH--DKSITANDL 323 >UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD86 Length = 224 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 29/236 (12%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TL Sbjct: 9 HNAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTL 68 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND--PSVVFDDI 141 LD+ QG + +++ L + + + E IH++SY+ I ++++ +F+ I Sbjct: 69 LDTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWI 128 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 T +Q++A+ + + Y+ ++ LYL +++ Sbjct: 129 ETEPTLQRKADLVLAQYE---------------------------NTTNQEGLYLSMVTS 161 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 LE+ FY F + + M + +II LI RDE+LH + + Sbjct: 162 VFLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLAQEIYDSF 217 >UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain n=247 Tax=Herpesviridae RepID=RIR2_HHV1K Length = 340 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 101/336 (30%), Gaps = 46/336 (13%) Query: 35 DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 L + W E+ D D L E E + + + D + + Sbjct: 44 PDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLG- 102 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV----TNEQIQKR 150 L L ++ + E HSR Y I + ++ + V + I+ + Sbjct: 103 GLSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVAGTINHPAIRAK 162 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + + + E + + L + +E I F Sbjct: 163 VDWLEARVRECASVPEKFIL------------------------------MILIEGIFFA 192 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 SFA L+ + LI+RDEA+H T + ++ N G P Sbjct: 193 ASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPPP-------- 244 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI--LCQYVEYITNIRMQAVGLDLPFQT 328 Y LF QA + E + S I + + YV + + + + + F Sbjct: 245 DRVYGLFRQAVEIEIGFIRSQAPTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSA 304 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDS 364 P L+S + E +SY ++ Sbjct: 305 PP-PDASFPLSLMSTDKHTNFFECRSTSYAGAVVND 339 >UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_AQUAE Length = 696 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 112/279 (40%), Gaps = 30/279 (10%) Query: 3 YTTFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ-LSFFWRPEEVDVSRDR 60 F+ + + K + G P N+ ++ KY L + + FW PEE+ + DR Sbjct: 12 KLIFNPQGDREASKRKIIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDR 71 Query: 61 IDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIH 119 Y+ L ++EK + L + LDS Q +I+ PE+E + F E++H Sbjct: 72 KQYETVLSDYEKRAYELVLSFLIALDSFQVDMLKE-FGRMITAPEVEMAITAQEFQESVH 130 Query: 120 SRSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 + SY I+ ++V+ +++ +E++ +R + I+ Y+E I + Sbjct: 131 AYSYQFILESVVDPVKADEIYNYWREDERLLERNKVIAELYNEFIRKPN----------- 179 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIAR 237 ++ + LE++ FY FA + + M + I+ I R Sbjct: 180 -------------EENFIKATIGNYILESLYFYSGFAFFYTLGRQGKMRNTVQQIKYINR 226 Query: 238 DEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 DE + GT+ + + ++ + E ++ Sbjct: 227 DELCFIEGTEVLTKRGFVDFRELREDDLVAQYDIETGEI 265 Score = 91.7 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 H+T ++++N LR + E ++ + F A +E W Y+ ++ ++G Sbjct: 575 NCHVTLFRNIINTLRKENPE----LFTPEIEKWIVEYFKYAVNEEIKWGQYVTQN-QILG 629 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 +N ++ +Y++Y+ N+R+ +G D + NP+ WI+ + +N + + + +Y Sbjct: 630 INDVLIERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYS 689 Query: 359 VGQ 361 Sbjct: 690 KAN 692 >UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subunit 1 n=23 Tax=cellular organisms RepID=Q3IM05_NATPD Length = 336 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 121/339 (35%), Gaps = 35/339 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLD 85 + +Y F + + +W E + S D D++ EK + + ++ Sbjct: 20 TQLKPYEYADFLDYKDAIRNSYWVHTEFNFSGDVQDFRTNTTPAEKTVIKRTMLAIAQIE 79 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 +Q ++ + + E+ T+A SE H +Y+H++ + F+++ Sbjct: 80 -VQVKTFWADIYDEMPKTEVGNVGMTFAESEVRHMDAYSHLLDILGITED--FEEVTDVP 136 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I+ R E + Y ++ + ++ + L+ +E Sbjct: 137 AIEDRIEYLDKYLEK------------------------SESDDKQEYVMSILLFSTFVE 172 Query: 206 AIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 + + F +F + ++ +G A + +++E +H ++ +R D Sbjct: 173 HVSLFSQFLIMMSFDKYKKKFKGIANAVEATSKEEQIHGLFGVELVETIREENPD----L 228 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 E+ ++E +A + E D++F +G + L + + ++ N ++ VG++ Sbjct: 229 FDEDFEEEVQAACQRAFEAEMKILDWIFGEGELEFLPRTHVDAFLRDRFNQSLENVGVEP 288 Query: 325 PFQTRSNPIPWINTW--LVSDNVQVAPQEVEVSSYLVGQ 361 F+ + + + ++Y Sbjct: 289 IFEPDDGLLEETRWFDEDIMMTKDNDFFSKRSTTYNKHA 327 >UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Environmental halophage 1 AAJ-2005 RepID=Q2XUY1_9VIRU Length = 358 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 121/344 (35%), Gaps = 35/344 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSI 87 +Y F ++ + +W +E + D DY+ E+ + ++ + Sbjct: 44 LKPYEYTDFLDYVDAVRNSYWVHDEFNFDGDIQDYRVNTTPAEQTTIKRTMLAIAQIE-V 102 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 Q ++ + + E+ T+A SE H +Y+H++ + + F+ I + Sbjct: 103 QVKTFWSDIYEDMPKAEVGNVGMTFAESEVRHMDAYSHLLDVLGIEDE--FEQITEVPAV 160 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 Q+R E + Y + S ++ + LM +E + Sbjct: 161 QQRIEYLDEYLE------------------------MGSSENKQESVMGILMFSTFVEHV 196 Query: 208 RFYVSFACSFAFAER-ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + F +F + + +G A + +++E +H Q ++ +R D Sbjct: 197 SLFSQFLIMTSFDKHEKKFKGIANAVEATSKEEQIHGLFGQELVETIREENPD----LFD 252 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 ++ E D QA + E + D++ DG + L ++ + +++ N + G+D F Sbjct: 253 DDFTDEIQDACQQAYEAESEILDWILEDGELDFLPREHIDAFLKDRFNQSLDNAGVDPVF 312 Query: 327 QTRSNPIPWINTW--LVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 + + + + + ++Y D Sbjct: 313 DPDEDVVDETRWFDEDIMMTKENDFFSKRSTTYNKHTQSVTADD 356 >UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Marseillevirus RepID=D2XAR5_9VIRU Length = 280 Score = 167 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 104/306 (33%), Gaps = 44/306 (14%) Query: 60 RIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI--PELETWVETWAFSET 117 D+ L + EK L + D I + +S E+E + A +E Sbjct: 1 MSDWSKLTKGEKKFVKLELAFFAQFDGIVVENLVRNFQQEVSSYAKEIEWFYILQAANEL 60 Query: 118 IHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEG 174 IH+ +Y ++I N++ P D I I+ A + + D I + Sbjct: 61 IHNETYMNLIDNLLPSPKKREKALDAISNYPSIRLIANWVERWMDRRIPLPE-------- 112 Query: 175 THTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRL 234 +++ ALE + F SFA F ++G K Sbjct: 113 ----------------------RIIAFAALEGVIFTGSFAAIHYFTITNRLKGLRKANEW 150 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 I++DEALH + + + + ++ ++ A + R Sbjct: 151 ISKDEALHQRFAEAVYRYIVD-----VIKAFPRVSQERVQEILGSAIDAVSPFIHDCLR- 204 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEV 354 + ++ + + Y++ + ++G + F + S + ++ + + + E V Sbjct: 205 FKNVNIDAERMIGYMKNAADGLAFSLGYEKFFNSDS-SLDYMLLIGMDN--KTNFFEEVV 261 Query: 355 SSYLVG 360 + Y G Sbjct: 262 ADYAKG 267 >UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib beta subunit n=7 Tax=Lactobacillus RepID=Q040X9_LACGA Length = 320 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 101/339 (29%), Gaps = 43/339 (12%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 M + ++ + + + + P V + DR ++ LP+ E+ + + Sbjct: 5 RKMNKKSYYKTSNWNAVEDQVDRSAWARLNDIVYEPRRVPIHEDRDEFSHLPKTEQTMLL 64 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND-- 133 + L ++Q + + E + E+I++++Y H + Sbjct: 65 HSFGSLALSSTLQMKVSLSKIKQDAENSEEAAVYNALQYLESINNKAYGHALTEFSTSNE 124 Query: 134 -PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 F+ N +QK+ +++ Y + Sbjct: 125 QRDEAFNWANQNPYLQKKMRLLNTVYQSDNAIQKKA------------------------ 160 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + + ++ SF + + A++I+ R L+ T Sbjct: 161 -------AHVFISTGLYHSSFFGPLYLFGQHKLPRTAELIKYALRITTLNGIYTGIKFRR 213 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 E I + YDL + E + L+ D + D + Y+ Y Sbjct: 214 DFFNLSKEEQKNIHK----WVYDLCDRLYANELNHIHLLYEDTGLE----DKVEHYIHYT 265 Query: 313 TNIRMQAVGLDLPFQTRSNPI-PWINTWLVSDNVQVAPQ 350 N + +G + + + P + T L+ + Sbjct: 266 LNKALMNLGQEPKYPENVETLDPTLTTGLMESAMIEDFF 304 >UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VB17_NAEGR Length = 330 Score = 164 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 111/350 (31%), Gaps = 52/350 (14%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSF-FWRPEEVD--VSRDR 60 SQ K + E + P + +Y ++ +K+L+ W E+ D + D Sbjct: 3 ELHSQLKQLEKSEEILSENPHRFTLF-PIQYPKLWEIYKKRLASSIWSVEQFDQIIRNDI 61 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + + L + Q + A I I E + + + IH Sbjct: 62 SKLSEICNSDHSFIKIILAFLVAN-CKQKTNLWGAFKD-IQILEAKHFHGFRLAMKNIHY 119 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Y ++ + + K+++ + + Sbjct: 120 EMYCNLFEILTEETERSELIEKMINSTMKKSQYTKKWLNS-------------------- 159 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 L+ + +E I SF F +R LM LI RDE Sbjct: 160 ----------DNLFSERLIGLVCIEQIFLSASFFSIFWLKKRGLMSALTISNDLIFRDEE 209 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 H + + L+ ++ + + L +A EK++ L +I L Sbjct: 210 FHSNFLYSLYSNLKH----------SKLPQTLVHSLVKEAVDIEKEFITSL--PTELIEL 257 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQ 350 +++ + QYVE +++ + + G + F T N WI L++ + Sbjct: 258 DRNSMYQYVEVVSDNILISFGYEKLFHTE-NQCSWIQDMLMN---KSGFF 303 >UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M646_CANTT Length = 252 Score = 164 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 5/157 (3%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-AL 66 + K + +EP+ + KY +K + FW EEVD+S+D D+ L Sbjct: 82 KLKQLEAEEPLLQENKRRYVMF-PIKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWNNKL 140 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 ++E++ L + D I G + + PE +++ E IHS Y+ + Sbjct: 141 NDNERYFVSRVLAFFAASDGIVGENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLL 200 Query: 127 IRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDE 160 I V DP +F+ I I K+AE + + Sbjct: 201 IETYVKDPQEADFLFNAIENIPCITKKAEWAIKWIQD 237 >UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain n=9 Tax=Lactobacillus RepID=D0R5X4_LACJF Length = 313 Score = 161 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 39/330 (11%), Positives = 104/330 (31%), Gaps = 42/330 (12%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 ++ + + + + P V + +D+ ++ LP++E+ + + + TL Sbjct: 7 YKANNWNTVEEQVDHSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHSFGSLTL 66 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFDDI 141 ++Q + + E + E+I++++Y++++ ++ Sbjct: 67 SSTLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDAYEWA 126 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 N +QK+ + +++ Y + + Sbjct: 127 NQNPYLQKKMKFLNTVYQSGNAIQKKA-------------------------------AH 155 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 L ++ SF + + A++I+ R L+ T E Sbjct: 156 VFLSTGLYHSSFFGPLYLFGQHKLPRTAELIKYALRITTLNGIYTGIKFRRDFFKLSKKE 215 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 ++ YDL E L+++ + D + Y+ Y N + +G Sbjct: 216 QNKVH----DWVYDLCDNLYDNELSHIKLLYQNTDLE----DKVEHYIHYTLNKALMNLG 267 Query: 322 LDLPFQTRSNPI-PWINTWLVSDNVQVAPQ 350 + + + P + T L+ + Sbjct: 268 QEPKYPENVETLDPILTTGLMESAMIKDFF 297 >UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain n=21 Tax=root RepID=RIR2_SHV21 Length = 305 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 116/337 (34%), Gaps = 54/337 (16%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 F +L ++ W P +V + D L E + + + + + + + L Sbjct: 16 FLELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIEDLL 75 Query: 97 LPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND-PSVVFD---DIVTNEQIQKRAE 152 ++ + E IH + Y +I+ + + + V+ DI+ + +Q++ Sbjct: 76 SQ-FDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKLR 134 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 ++ E + L +E I F S Sbjct: 135 WLNGRVTEASDKAEKILL------------------------------FLLVEGIFFISS 164 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 F F R +M G IARDE LH + + N + ++ P + Sbjct: 165 FFSIGLFRVRGIMNGICLANDYIARDEMLHTSAAALLYNTMTKSSERPS--------EDW 216 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF---QTR 329 Y LF +A + E + + + +N + Q+++ + ++++ L+ + Sbjct: 217 IYKLFREAVEVEFKFI--AAKGYGVSLVNVHEIRQFLQATADRILESINLNPIYGSLPPE 274 Query: 330 SNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 + P+ + S V E + S Y G + +++ Sbjct: 275 NCPLAY-----TSSTKSVNFFERDNSDYT-GTLTNDL 305 >UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomycetales RepID=RIR2H_MYCTA Length = 314 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 105/314 (33%), Gaps = 37/314 (11%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 KL + FW P ++D +RDR D++ L + E+ + + Sbjct: 22 KLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSA 81 Query: 99 LISIPEL--ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISS 156 + + L E ++ +AF E H++ + + + + + + Sbjct: 82 MRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDL-------HRYLDDLPAYRQI 134 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 +Y EL E + ++ + + +E + + Sbjct: 135 FYAELPE----------------CLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAW 178 Query: 217 FAFA-ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYD 275 ER ++ G +++R I DE H+ R A D + E E Sbjct: 179 HKICVERAILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDANWTVFETRMNELIP 236 Query: 276 LFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW 335 L ++ E+ +A L+ D L+KD +++Y T+ M+ G R P+ Sbjct: 237 LALRLI--EEGFA--LYGDQPPFDLSKDD---FLQYSTDKGMRRFG--TISNARGRPVAE 287 Query: 336 INTWLVSDNVQVAP 349 I+ ++ Sbjct: 288 IDVDYSPAQLEDTF 301 >UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomycetales RepID=RIR2H_RHOSR Length = 324 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 108/356 (30%), Gaps = 42/356 (11%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 +T + + F +D +L K + FW P ++D SRD D+ Sbjct: 2 STLTPGRPYAPGRQGFSSLRAGGLNWDAFP----LRLFTKGNAKFWNPTDLDFSRDAEDW 57 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL--ETWVETWAFSETIHSR 121 + L ++ + + + + + E ++ + F E H++ Sbjct: 58 EGLNSEQQRNSTYLVAQFIAGEEAVTEDIQPFMKAMAAEGRFGDEMYLTQFCFEEAKHTQ 117 Query: 122 SYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 + + + + + + + +Y+EL Sbjct: 118 VFRLWMDAVGLTRDL-------HPFVAENPYYRQLFYEELPGSLK--------------- 155 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFA-ERELMEGNAKIIRLIARDEA 240 V + ++ + + +E + R ++ G +++R I DE Sbjct: 156 -VLETDPSPVNQVRASVTYNHVIEGSLALTGYYAWQKVCTTRGILPGMQELVRRIGDDER 214 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 H+ R A D + +E E L + W + F + GL Sbjct: 215 RHMAWGT--FTCRRHVAADDSNWGVVQERMAELMPLALGMID----WVNKQF-EVQPYGL 267 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 + ++ Y + + +G R P+ I+ + ++ E + + Sbjct: 268 DDQE---FIAYAADRAQRRLG--AIESARGRPVEEIDLDYSPEALEEKFGEEDAKA 318 >UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepID=C8WQL9_ALIAD Length = 317 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 96/294 (32%), Gaps = 35/294 (11%) Query: 38 EKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 +L K W P ++D ++D+ D+Q + E E+ + + + + Sbjct: 25 MRLYHKAKKLGTWDPRDIDFTKDKEDWQGMNEAERRVILRLCSLFVAGEEAVTLDLLPLI 84 Query: 97 LPLISI--PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGI 154 + + E E ++ T+ F E H+ + + + + S + + + Sbjct: 85 MAVAREGRLEEEMYLTTFLFEEAKHTEVFRRFLDEVAGETSDL--------SVFHKDHYR 136 Query: 155 SSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFA 214 +Y+ L + V + + + +E + + Sbjct: 137 KIFYEYLPQ----------------AMGRLVHDPSPEAQAEASVTYNMVVEGVLAETGYY 180 Query: 215 CSF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD------DPEMAEIAE 267 + A + + G + IRL+ RDE+ H+ ++L+ L S + + + Sbjct: 181 AFYTALQKENKLPGLIQAIRLLQRDESRHIGYGTYLLSRLISENAHIWDVVNRRINLLLP 240 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSM-IGLNKDILCQYVEYITNIRMQAV 320 DL + +E + GLN D Y + R+ + Sbjct: 241 HAIGVVQDLNAELDTEEAQKLAEELGITDVPFGLNPDEFVAYAQKQFATRLGVL 294 >UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain n=3 Tax=Thermus RepID=Q745Z4_THET2 Length = 324 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 105/344 (30%), Gaps = 35/344 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQ 88 Y +Y + + +W E D D+ E E+ + L ++ Sbjct: 10 YRPYEYPELLRFRDAIRHSYWVHTEFSFQSDLQDHALADEKERSLVERALLAIAQVELAV 69 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + + PE+ T+A SE H+ +Y H Sbjct: 70 -KLFWARVYDRFPKPEIAEVGLTFAESEVRHANAYAH----------------------- 105 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 + + + L + + ++L++ + E + Sbjct: 106 --LLELLGLEEAFGQALEGASALRDRAQALGEALRRAQGKDLREYALALFLFSAFTEHVS 163 Query: 209 FYVSFACSFAFAERE-LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + F A R +G + I +++E +H +L LLR+ + + E Sbjct: 164 LFSQFYVLMALNRRGNRYKGISNAIEATSKEENVHGLFGVELLRLLRTEHPE----ALGE 219 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 ++E L + E+ D+LF G + ++++ N + GL PF Sbjct: 220 GFQEEALRLAQGLFRAEEALLDWLFSAGEPALVGHRETLEFLKGRYNQVLALHGLPPPFP 279 Query: 328 TRSNPI---PWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 + W L++D +V +Y + + Sbjct: 280 VDEKALRDTEWFTLELLAD-KEVDFFNKRSVAYARRVQSFDPEE 322 >UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1H3S0_VITVI Length = 269 Score = 151 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 67/181 (37%), Gaps = 15/181 (8%) Query: 187 LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGT 246 L++ +E I F SF F ++ LM G LI+R E LH Sbjct: 91 PLCSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFA 150 Query: 247 QHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILC 306 + +LL+ Q+ + + +A + E + ++IG+ ++ Sbjct: 151 CLLYSLLQKQLP-----------WQKVHHIVHEAMEIETQFICEALP-CALIGMKATLMS 198 Query: 307 QYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 Y++++ + + A+G + + NP W+ + + + Y I S + Sbjct: 199 HYIKFVVDRLLVALGYERKYNVE-NPFDWMEF--IFLQGNANFFQRRMGDYQKASIMSSL 255 Query: 367 D 367 D Sbjct: 256 D 256 >UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative n=10 Tax=Plasmodium RepID=B3L3V1_PLAKH Length = 335 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 124/366 (33%), Gaps = 52/366 (14%) Query: 11 NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 + Q + + + KY F ++ S FW E+ + +D+ +++ ++ Sbjct: 14 DAQNNDDILKENQFRWVMF-PIKYKTFWSYYKEVESLFWTAEDYNFDKDKKFLESIDKNM 72 Query: 71 KHIFISNLKYQTLLDSIQGRS---PNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + + +L D +L +I IPE + E IH Y I Sbjct: 73 LVKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIF 132 Query: 128 RNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 + D + + ++ + + K+ + ++ ++ I + L+ NG Sbjct: 133 ETYIPDAKQKRTIINKVIQLDSVLKKQKWLTELFETNIPFYNKLVLIYISKVLFNGTLNI 192 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 + + + CL +V+ I RDE LH Sbjct: 193 LIGYCKENSILPCLCNVH------------------------------EKIHRDEYLHGD 222 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 + N L + + D F A + E +A + D S++ + K+ Sbjct: 223 FSVMCCNHLNNKLK-----------YERLLDYFKMAVKLEYQFAIEML-DLSVLKIKKEQ 270 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPIPW--INTWLVSDNVQVAPQEVEVSSYLVGQI 362 + ++EY+ + + + F ++ P W N +VS+N + + Y QI Sbjct: 271 VKSFLEYLADTMLVNLKHPKYFNSKY-PFTWPEFNKIVVSENQKTESVKKAEDIYGERQI 329 Query: 363 DSEVDT 368 + D Sbjct: 330 VLDEDF 335 >UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomycetales RepID=RIR2H_MYCA1 Length = 311 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 104/328 (31%), Gaps = 42/328 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 +D KL + FW P ++D SRDR D++ L + E+ Sbjct: 12 GGLNWDSLP----LKLFAGGNAKFWNPADIDFSRDRADWERLTDDERSYATRLCAEFIAG 67 Query: 85 DSIQGRSPNVALLPLISIPEL--ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV 142 + + + + + L E ++ +AF E H + + + + + Sbjct: 68 EESVTQDIQPFMAAMRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGVTDDL------ 121 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 + + + +Y+EL + ++ + + Sbjct: 122 -HHFLDDVPSYRTIFYEELPD----------------CLNALTIDPSPAAQVRASVTYNH 164 Query: 203 ALEAIRFYVSFACSFAFA-ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 +E + + ER ++ G +++R I DE H+ R A D Sbjct: 165 MVEGMLALTGYFGWHKICVERGILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDA 222 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 + E E L ++ E+ +A Y + + +++ Y ++ M+ G Sbjct: 223 NWGVFETRMNELMPLGLRLI--EEGFALYDPMPFDL------SVDEFMAYASDKGMRRFG 274 Query: 322 LDLPFQTRSNPIPWINTWLVSDNVQVAP 349 R P+ I+ ++ Sbjct: 275 --TIASARGRPLAEIDLDYTPVQLEDTF 300 >UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae RepID=A5UUQ7_ROSS1 Length = 297 Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 90/294 (30%), Gaps = 39/294 (13%) Query: 33 KYDIFEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRS 91 + + +L EK W P ++D S+D D+Q L E+ + + + Sbjct: 15 RDTVPMRLFEKAKRLGVWNPSDIDFSQDVRDWQTLTADERDLVLRLTSLFQAGEEAVTLD 74 Query: 92 PNVALLPLISIP--ELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 149 + + + E E ++ ++ + E H+ + + + Sbjct: 75 LLPLVATIAAEGRIEEELFLTSFLWEEAKHTDFFNRFLTEVTG----------------- 117 Query: 150 RAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRF 209 +L + + + + L +E + Sbjct: 118 -------VTGDLSHYHTSNYRALIHEALPAAMGRLRDDPSPEAQAIASLTYNMIVEGVLA 170 Query: 210 YVSF-ACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 + A R+LM G K I L+ +DE+ H+ ++L+ L +P + ++ Sbjct: 171 ETGYHAYFTMLERRDLMPGTRKGIGLLKQDESRHIAYGVYLLSRLI--NAEPRLWDV--- 225 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSMI--GLNKDILCQYVEYITNIRMQAV 320 + + D F ++ GL+ D + R+ + Sbjct: 226 ----IVERMNELVVYAMGVIDDAFACYEVVPFGLSHDDFMHFAMGQFQRRLDRI 275 >UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0R0_9EURY Length = 296 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 91/292 (31%), Gaps = 24/292 (8%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSP 92 ++ +L+ + + W P +DV D+ L E L + Sbjct: 25 EHPK--RLVRSAIEYHWDPAAIDVRADQEAVSELSRVEFTRLRGLLAQFGAGERAVTTDL 82 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L ++ + + ++ T + E H+ + + ++ I T + Sbjct: 83 AP-LAVVLDGSDEQRYIATQLYDEARHTELFDRYWKRVIRPEEESRGLIPTEPMADR--- 138 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 Y EL + TS T + L + L + +E Y Sbjct: 139 WSHDDYRELFDRTSNAMARLLERDTSETRARAFCHYHLTVEGILAQTAYRWVETR--YSG 196 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 + G R + RDE H++ + L DPE Sbjct: 197 -----ELEAVPELPGLVNGFRYLRRDEGRHVSFGVTKVRKLVDKGVDPET---------- 241 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 + + + D + RDGS+ G +++ + ++ + R++ VG+ Sbjct: 242 IVETIDELVPLVETTIDQMVRDGSI-GADRNGILNRIDTARDRRLEQVGVVP 292 >UniRef50_D2S309 Ribonucleotide reductase beta subunit-like protein n=3 Tax=Halobacteriaceae RepID=D2S309_9EURY Length = 302 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 28/288 (9%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 + + W P E+D+ DR LP+ +L + L Sbjct: 20 HRYYRNAVEKHWDPHEIDLEADREGATDLPDPAFEGLKQSLALFGAGEESVTEDLAP-LA 78 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ E + ++ T + E+ H+ + R +++ +++ +K + Sbjct: 79 VVLEDIEDQLFITTQLYEESKHTDFFDRYWREVIHAEEERRGQELSSPADEK---WFNEP 135 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 YDEL E + T + L +E I + Sbjct: 136 YDELFERNERAMVQLLEEDTPKNRAKAHCHYHLT------------IEGILAQTGYYGLT 183 Query: 218 AFAEREL-----MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 + + G + ++L+ DE H+ L L + ++ + E Sbjct: 184 LAYGEQEPDLPDLPGLVEGLKLVRSDEGRHVGFGMAQLKSLVIDGE--VDPDVLRDTVDE 241 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 L + E +G G + L +Y RM+ + Sbjct: 242 LVPLVQDSLAGE---GGASTEEGP--GPSPSDLAEYAYTKHEQRMRQI 284 >UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Brugia malayi RepID=A8PTX7_BRUMA Length = 288 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 1/133 (0%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 T + + + E + P + K+ +K L+ FW +EVD+S+D D+ Sbjct: 34 TATTTVRYESNGEILLAENPNRFVIF-PIKFHDIWDFYKKALASFWTVDEVDLSKDYRDW 92 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + L + E+H L + D I + + +PE + E IHS Y Sbjct: 93 ENLNDGERHFISRVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENIHSEMY 152 Query: 124 THIIRNIVNDPSV 136 + +I + D Sbjct: 153 SKMIDTYIRDQKQ 165 Score = 104 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 28/232 (12%), Positives = 72/232 (31%), Gaps = 19/232 (8%) Query: 150 RAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRF 209 + I +Y + + + + + + R ++ + + + Sbjct: 62 KFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISRVLAFFAASDGIVNENL 121 Query: 210 YVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA------ 263 F+ E G +I E +H M++ + Sbjct: 122 VNRFSQEVQVPEARFFYGFQIMI------ENIHSEMYSKMIDTYIRDQKQKKFRKFCVTL 175 Query: 264 ---EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 EI ++ +F ++++ +IG+N ++CQY+EY+ + + + Sbjct: 176 CFLEINLSNYKKFTSMFNACIDAKQEYLTEALP-VDLIGINCKLMCQYIEYVADHLLTEL 234 Query: 321 GLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + + NP ++ + + E VS Y + S + + Sbjct: 235 HCAKIYHSD-NPFDFMERISI--EAKTNFFEKRVSEYQKAGVLSSEEGKSFN 283 >UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theileria RepID=Q4UJ43_THEAN Length = 332 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 128/372 (34%), Gaps = 49/372 (13%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + YT+ + +ND E + + ++D F L ++ + FW E+ + D Sbjct: 6 LPYTSILKVQND---EILLKENHNRWVMF-PIEHDTFWILYKEVENNFWAAEDFIFTDDI 61 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDS---IQGRSPNVALLPLISIPELETWVETWAFSET 117 LP+ + ++ L + LD+ + + LL + I E + E Sbjct: 62 KLLYQLPKPIFNTLLNLLSFHINLDNKLICRPVDITLDLLSEVQIAEARAFYGFQLTDEN 121 Query: 118 IHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 IH+ + + + +F+ + + +SSY + Sbjct: 122 IHTETISSMF--------QLFNQQLDTNIVSSNTLFLSSYGMD--------------KII 159 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF-AFAERELMEGNAKIIRLIA 236 + K+ L L +M + FY S + +L+ I Sbjct: 160 WLYNECENNKCFFKRVLLLVIMK------LLFYCSINILRDYLLKEKLLPTFITAFDSIT 213 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 D +H LL++ + + E ++ QA + E + + Sbjct: 214 NDRIIHTRFAHCTFRLLQN-----------KMLESEVLEIIKQALKLEYQFI-LQYFTIQ 261 Query: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 L+ +++ Y+E+I N + G + + + I W+N ++ N+Q +++ + Sbjct: 262 FFNLSTNVIKSYLEWIGNNILLVCGYKTLYTSEFD-IDWLNHPIIDLNIQKQTNKIQKHN 320 Query: 357 YLVGQIDSEVDT 368 + I + D Sbjct: 321 ENLNDIKFDEDF 332 >UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=Cryptosporidium RepID=A3FPS5_CRYPV Length = 339 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 102/340 (30%), Gaps = 26/340 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + Q E + P + KY L +K FW E + D+ + Sbjct: 7 ELLEQQKNESILLDNPFRWVLF-PIKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMD 65 Query: 68 EHEKHIFISNLKYQTLLDS--IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 E + +D+ + LL + +PE + E I Y Sbjct: 66 EKLLDYIEMAFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENI----YKE 121 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAE------GISSYYDELIEMTSYWHLLGEGTHTVN 179 + N V + I ++++K+ E Y+ +E + Sbjct: 122 LFMNYVEMIRKNKEKIERTDEVEKKDENNLNSKISKEEYEYNLEKKLNELEDFTKMKELV 181 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 G +K +Y ++ +I +E EL + I RDE Sbjct: 182 GNFYDEDTLFSEKLIYYVIIKKIFSSSIHLLRLSFSMRNISESELPTQLCDGLDRIRRDE 241 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 + + +++ + + +L QA EK++ + ++ Sbjct: 242 QYQVEFCLSIAKSMKTKPSN-----------DQVVNLLEQAIMLEKNFIFSIVDP-QVLQ 289 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTW 339 + ++ + ++ + + + + F SNP I Sbjct: 290 IEREDIVAFLLFNADEILVDLKYPRQFNV-SNPFINIMND 328 >UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae RepID=C9RTF8_GEOSY Length = 302 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 83/288 (28%), Gaps = 28/288 (9%) Query: 37 FEKLIEKQLSFF-WRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 KL EK W P ++D S+D+ D+ L EK + + + + Sbjct: 20 MYKLYEKAKRNGKWNPADIDFSQDKEDFARLTSEEKIAALPLVAGFSAGEEAVTLDILPM 79 Query: 96 LLPLISI--PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEG 153 L E ++ T+ E H ++ + + + + Sbjct: 80 AHALARQGRLEDVMFLTTFMHDEAKHVEMFSRWQQEVGIGAMDL--------SVFHNDHY 131 Query: 154 ISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSF 213 +Y+ L E + + + + +E + Sbjct: 132 KRIFYEALPE----------------AMNRLYTDDSPEAVIRAATVYNMIVEGTLAESGY 175 Query: 214 ACSFAFAER-ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 ++ L G + I + DE H+ + + L + + I + Sbjct: 176 YTFRQIYKKAGLFPGLLQGIDYLNMDEGRHIQFGLYTIQRLVNENERYYDLFIQYMDELW 235 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 + + A E + ++ D+L YV NIR + + Sbjct: 236 PHVVGYVAYLTELGKRQQQLARTYALEIDYDMLNNYVVKQFNIRKKQI 283 >UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS Length = 369 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 42/378 (11%), Positives = 107/378 (28%), Gaps = 47/378 (12%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 + S + ++ + + + + Y + + +W E + D Sbjct: 13 KSALSLPRLEEDLPEYNNSETLVLKIWPP-TYAPSWHYYQLHQANYWSATEHEPLEDVSG 71 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 + L + + + + D + + L + + ETIH Sbjct: 72 FIKLDSQWQKAVLHSFAILAIGDDAVMQFIDENDLEWEECTQW--MFKDQGARETIHKIV 129 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 Y ++ A+ S + ++ Y + + + + Sbjct: 130 YNKML---------------------HLADHSSEFTTSMLTSKKYINYILHNNSDLKLQK 168 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 + +KK L+ + E F F E + +I + +DE +H Sbjct: 169 YKLEDEVMKK--AAFLIKMIFCERYLFATPFLVINLMGESGFLNNCVRINMQVMKDEHVH 226 Query: 243 LTGTQHMLNLLRSGAD-----DPEMAEIAEECKQECYDLFVQA-AQQEKDWADYLFRDGS 296 + L+ +D + ++A+E + ++ ++ A E + Sbjct: 227 YLHAVQLFRDLKPKSDQIDEINKLFFDMAQEFVEIVENMIMKIGAGLESKY--------- 277 Query: 297 MIGLNKDILCQYVEYITNIRMQAVGLD-LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 K + + + G+D P+I + + E + Sbjct: 278 -----KQGFLDHSRFTLHTIYSDCGIDVPQSLAEYTTTPFIVFDKNTGADKFNLMESNST 332 Query: 356 SYLVGQIDSEVDTDDLSN 373 Y + D ++L + Sbjct: 333 VYKAVRAQYVPDWNNLQD 350 >UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus RepID=C3MUE4_SULIM Length = 308 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 105/323 (32%), Gaps = 48/323 (14%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 ++ K F + KL + FW P +D+S+D D++ L + EK Sbjct: 6 EEYKHEYFKSIKSGGLNWSLFPM----KLYQLGKKLFWDPANIDLSKDAEDWKKLNDLEK 61 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIP--ELETWVETWAFSETIHSRSYTHIIRN 129 I+ + + ++ L+ E ++E + + E+ H ++ Sbjct: 62 MFIINVGSKFAAGEEAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAFRRF--- 118 Query: 130 IVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRE 189 FD + E + + +S Y ++ Sbjct: 119 --------FDAVNVMEDLSTYTKDLSPNYKKIF-----------YEELPKAMWNLSRDPS 159 Query: 190 LKKKLYLCLMSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQH 248 + ++ + +E + + R+++ G AK++ LIA DE+ H+ + Sbjct: 160 PENQVRAVVTYNLIVEGVAAEGGYNIFRQITNTRKILPGLAKMVNLIATDESRHIAFGIY 219 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSM-------IGLN 301 ++ L +E + Y + +A +F + +M L Sbjct: 220 LITRLV------------KEYGEGVYKAAMDHINYLAPYAIGIFSEPTMPQVESLPFNLT 267 Query: 302 KDILCQYVEYITNIRMQAVGLDL 324 L Y + + N R+ A+ Sbjct: 268 NIELVDYAKKLLNTRIDAINRAK 290 >UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Corynebacterium phage P1201 RepID=A7IYE3_9CAUD Length = 237 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 92/265 (34%), Gaps = 34/265 (12%) Query: 109 VETWAFSETIHSRSYTHIIRNIV--NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTS 166 ++ F E +H++SY+ + + D F + N+ Q + YD Sbjct: 1 MKQIGFMEEVHAKSYSSVFSTLFGSEDIDGAFAWVENNKATQVKKLVFDEAYDISDYNDR 60 Query: 167 YWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELME 226 G S LE+ FY F FA + + Sbjct: 61 RVEYYGAIIR----------------------ASSVLLESFLFYTGFYLPLHFASQGKLT 98 Query: 227 GNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKD 286 A +IRLI RDE +H + + + + K+ +L + E Sbjct: 99 NTADLIRLIMRDEGVHGYYLGYKFQ----KVMEGALPYERDAVKERVTNLACRLFVNEIP 154 Query: 287 WADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR-SNPIPWINTWLVSDNV 345 + ++ +GL+ + ++ Y N MQ +GL+ F + P I + L D+ Sbjct: 155 LIEEIY---EPLGLSAQ-VQTFLRYNLNKAMQNLGLENVFPAEMTRVEPRILSQLSVDSE 210 Query: 346 Q-VAPQEVEVSSYLVGQIDSEVDTD 369 + SSY++GQ + D D Sbjct: 211 ETHDFFSGSGSSYVIGQAEETTDDD 235 >UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n=2 Tax=Streptococcaceae RepID=A4VCA2_9LACT Length = 317 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 97/325 (29%), Gaps = 41/325 (12%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 ++ + + + E+ S FW + + D ++ L E+ L T Sbjct: 8 YRAINWNIVEDEFDNAVWERATSLFWLDTRIPIENDFTNWIKLNLEEQGQLKCLLILLTN 67 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP--SVVFDDI 141 L + Q + + + F E +++++Y I+ + F+ + Sbjct: 68 LSTNQSIEVGEIVRNGKCSQQEVAILNNIQFIEMVNTKAYNRILLTFDKEINLEKSFEWV 127 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 + ++ + I++ Y E L Sbjct: 128 DNDSRVLEYLNDINTVYRE-------------------------------SSLIKKRFIA 156 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 +E + Y + F + ++ +I R+E+LH H + LL +D E Sbjct: 157 LCVEGLLNYAYLSHLFELWINKEFNNLGTMLEMIIRNESLHCFYFSHKVKLLLKESDPKE 216 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 E K Y+ + + D + +K I + N + +G Sbjct: 217 ----VERFKAWSYETVNHFVKLGLNIIDDFYYLKE----SKKIAKNLILQEANNILMGIG 268 Query: 322 LDLPFQTRSNPIPWINTWLVSDNVQ 346 L F + IN L + Sbjct: 269 LKEQFGFNDEVLKGINYRLNNLRRH 293 >UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C317CA Length = 306 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 85/286 (29%), Gaps = 23/286 (8%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 +L W +++D ++D++D+ E E+ + L + + L+ Sbjct: 38 ELYSLWERQHWAVQDLDFTQDKLDWHERFDEEERFARMYGLSAFFIGEQRVAAELGP-LM 96 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ ++ T E H + + D++ E ++++ S + Sbjct: 97 RAAPQEDMRLFLCTQIADEARHVAFFDRFYSEV---------DVLGVEGLEEKLAATSEH 147 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSF-ACS 216 + + L +L+ + + +E + Sbjct: 148 LNPEFGVLFDEMLKSRVDRLATE------PEDLETLVEAITIYHMVIEGMLALTGQHFII 201 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 + G + +ARDE H+ L + DP + E + Sbjct: 202 DYNEREGTLPGFVEGFINVARDEHRHVAFGARFLRDMAR--SDPRHVAAIQRTLGEIAPV 259 Query: 277 FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + WA D + G++ + RM+ +GL Sbjct: 260 AEGVLKP--KWAPDD-DDFEIFGISVTETRAFAFRALERRMKVIGL 302 >UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subunit, putative n=1 Tax=Babesia bovis RepID=A7AR36_BABBO Length = 329 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 96/309 (31%), Gaps = 54/309 (17%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 +Q E + + YD + ++ + FW E+ + +R Y +LP + Sbjct: 17 EQHNETLLKENANRWVMF-PIHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELR 75 Query: 72 HIFISNLKYQTLLD-SIQGR--SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 + + + Y LD S R + + LL IPE + E IHS + + Sbjct: 76 QLVVKLISYHNRLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIMSS 135 Query: 129 NIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 I + + E ++ + + V L+ Sbjct: 136 AIPGTID--------VPEADAKIEWLTRNLTST-----------------SCFYIKVILQ 170 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 + K ++ + A + + + +A+D ++HL Sbjct: 171 CISKAIFRSAFGILA-------------DYLRNSKKLPTLLSALDTVAKDVSIHLKFAMA 217 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 L L+ ++ +L A E + + M GL++ L QY Sbjct: 218 ALEHLKLRPT-----------RETVMELLNSAYDLEMAYCRSVLPMDHM-GLSEYHLSQY 265 Query: 309 VEYITNIRM 317 ++ N + Sbjct: 266 IKNNVNQCL 274 >UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, beta subunit 2 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IMN4_NATPD Length = 306 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 78/297 (26%), Gaps = 40/297 (13%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQAL------PEHEKHIFISNLKYQTLLDSIQGRS 91 + + W P ++++ DR + +A PE S + + Sbjct: 18 MRYYRNAVERHWDPHDIELDTDRENLKAFLDSTDTPETYLDGLRSGVARFGAGEQAVTED 77 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 L + + + +V T + E H+ + R +++ + Sbjct: 78 LAP-LATALGSIDDQMFVTTQIYEEAKHTDFFDRYWREVIHPVEDALGL---DPSSPTDE 133 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 + Y+EL + T +E I Sbjct: 134 TWFNDAYEELFDRNEEAMERLLAAPTAEQFAKAYCHYH------------LVIEGILAQT 181 Query: 212 SFACSFA------FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR--SGADDPEMA 263 + + E + G I +DE H+ L L D + Sbjct: 182 GYYGMQQSYSADSYPELPHLPGLCDGFTKIRQDEGRHVGFGMAKLKALVGDGKVDPQLLD 241 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 +I E D+ D F D +G+ + L + RM+ + Sbjct: 242 DIVGELLPLVDDITTDV-------GDESFDD---VGIPPEELEAFAAEKHTERMEQI 288 >UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyostelium discoideum RepID=Q54E77_DICDI Length = 257 Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 92/244 (37%), Gaps = 43/244 (17%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARY------DQQKYDIFEKLIEKQLSFFWRPEEVDV 56 T + K L +F + +A++ ++ K+ +K L+ W EE++ Sbjct: 47 KHTITDNKIYILINSIFKDNNLKMAQFIFKNFENEISPLDIWKMYKKTLANQWVVEEIES 106 Query: 57 SRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFS 115 S D +D++ L E+ F + L + I ++ + + IPE + + Sbjct: 107 SDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-NRFMSKVQIPEAKCFYNYQIHI 165 Query: 116 ETIHSRSYTHIIRNIVND---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLG 172 + +HS +Y+ +I + D +F+ I T ++K+AE + +E E Sbjct: 166 KYLHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKAEWALKWINESFE--------- 216 Query: 173 EGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKII 232 L+++ A E+I F SF +R LM+G Sbjct: 217 -----------------------KRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSN 253 Query: 233 RLIA 236 LI Sbjct: 254 ELIN 257 >UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC3_9VIRU Length = 400 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 38/271 (14%) Query: 16 EPMFFGQPVNVAR---YDQQ-KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE- 70 E + + Y K+ L K S FW E D S DR ++ + E Sbjct: 34 EDILDPDNLKHRNQTLYPPARKFKDTYDLWLKHQSCFWSVHENDPSVDRDRFETMTPKEF 93 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 + I + + + DSI L ++ EL+ E IH + Y++++ Sbjct: 94 QEILLCTVGCIAIGDSIVLDRIANGLKERVTSIELKAMFSDQEAREFIHKKMYSNMLD-- 151 Query: 131 VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 V++ R+E + Y ++E + + +G Sbjct: 152 -----------VSHRANYYRSEEFKNEYMSVLETLADKYDIGYVQVQ------------- 187 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 + + E I F F A + + L+ RDE +H + Sbjct: 188 -------MFFIMMCEIILFTPMFQTICYAACKGYCPKLCDLNLLVMRDEYIHYENARLQS 240 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAA 281 ++ D + E + LF + Sbjct: 241 FKFKTKLDRKFARTVLAEFSELTLQLFAKII 271 >UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WK83_ACTMD Length = 320 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 88/303 (29%), Gaps = 31/303 (10%) Query: 30 DQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQ 88 D +K + L ++ + W ++D S+D +D++ + + E+ F + Sbjct: 35 DLKKLPEYIDLYKRYFTHRWNAYDLDFSQDAVDWRTKMTDVERKAFTEIAAAFHHAERQV 94 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + L E + ++ T E H+ + R +V P Sbjct: 95 EVEL-PIFM-LTGSEEAKMYLCTQLEDEARHTLFFDRFYREVVGLP-------------- 138 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 + + + G + + V K++ +E + Sbjct: 139 --GDSVEELLASSFPHVPETFVGAFGLLSYLADDLRVDPENPAKRVRYATAYFMWIEGVL 196 Query: 209 FYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + + + G RDEA H+ L Sbjct: 197 ALTIMKLTLTYCRTKGYLPGYYTGFIASCRDEARHVQFGMRFLRDSVQEDPR-------- 248 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 E ++ + + + +G +++ + ++ N ++ VG+ LP Sbjct: 249 -LLHEIHETLRT--ELAMNGGASVPAPLEPLGFSEEEVVHFMIRQVNNKLSDVGISLPPD 305 Query: 328 TRS 330 + Sbjct: 306 IQE 308 >UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH Length = 231 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 2/108 (1%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHI 73 +EP+ P + +Y ++ +K + FW EEVD+S+D D++ L E+H Sbjct: 6 EEPILTPTPDRFCMF-PIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHF 64 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 L + D I + + + + I E + E IHS Sbjct: 65 IKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE 112 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 74/228 (32%), Gaps = 32/228 (14%) Query: 154 ISSYYDELIEMTSYWHLLGEGTHTVNGKT-VTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 I Y + + + + +T R K + + + + Sbjct: 27 IWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAASDGIVLENLSTR 86 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 F +E G I E +H E+ + + Sbjct: 87 FMSDVQISEARAFYGFQIAI------ENIHS-----------------EILLRTKFDEDR 123 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNP 332 + A + E+++ +++G+N++++ QY+E++ + + A+G + NP Sbjct: 124 LKAIVCDAVEIEREFVCDALS-CALVGMNRELMSQYIEFVADRLLAALGCGKVYGVT-NP 181 Query: 333 IPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD----TDDLSNFQL 376 W+ L+S + E V Y + S V +D F+L Sbjct: 182 FDWME--LISLQGKTNFFEKRVGEYQKASVMSSVHGNAAFNDDHVFKL 227 >UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, beta subunit 3 n=2 Tax=Halobacteriaceae RepID=Q3INJ5_NATPD Length = 316 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 88/284 (30%), Gaps = 20/284 (7%) Query: 40 LIEKQLSFFWRP-EEVD---VSRDRI---DYQALPEHEKHIFISNLKYQTLLDSIQGRSP 92 + + W P E+++ + +DR D E E + L + Sbjct: 22 YFKHAVYNHWDPYEDIEKALIEQDRKRLIDADEFGETEFEDLMRTLALFGAGEEAVTEDL 81 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L+ ++ + +V + + E H++ + R +++ + Q+ Sbjct: 82 AP-LMLVVDDINDQMFVSSQIYEEAKHTQFFDRYWREVIHPVADARGFERRAPTDQR--- 137 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 Y +L + T + + +++ I +S Sbjct: 138 FFVDGYVDLFDRTEAAMERLLEPGEDTPTNRVRAYCHYHLTV-ESVLAQTGYWGIVSSMS 196 Query: 213 FACSFAFAEREL--MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 S A E + +EG K I I DE H+ + A+D + E Sbjct: 197 PRGSEALREDGMPHLEGLVKGISFIRSDEGRHVGFGMQKVQS--HLAEDGVDESVVRETL 254 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 QE L + D + ++ + L + +E IT+ Sbjct: 255 QELLPLVAETVSA----TDEVTDPEPLVEYASEKLTRRIEVITD 294 >UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus RepID=Q91ES7_GVCP Length = 362 Score = 124 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 82/352 (23%), Gaps = 38/352 (10%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 + + Y + + W E D + + ++ + + + Sbjct: 34 NRLKIWPP-TYTPSWNYLVEHQINHWYANEHKPMDDLNGFDKIDSAWQNALLQSFAVLAI 92 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 D + + + + A ET H Y ++ Sbjct: 93 GDDKVMDLISNSDIEWEEST--KWMFADQAARETTHKIVYNRMLELAC------------ 138 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 +S Y + + ++ + K L+L M Sbjct: 139 ----------VSRSYTVNTLTSGDFSHYIMDCRVLDEFQLPERNEVNDKVLFLSTM--IL 186 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-EM 262 E F F E + KI + +DE +H +L L+ G + E+ Sbjct: 187 CERYLFAAPFLIINLMGESGFINKCVKINMQVMKDEHVHYKHAVQLLMDLKRGVTNEVEI 246 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 E+ L L + + + + + + Sbjct: 247 NELFRGLSGAFMVLVESMV---MKICIDLTYQQKI------SVLHHTRFTLRDIFVTLQI 297 Query: 323 DLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSN 373 + P + P+ + E + Y D L Sbjct: 298 EPPPAVVQYTITPFKVFDKNCGEDKFNLMESTSTVYNASNSIYYPAWDVLDE 349 >UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Tortoise herpesvirus RepID=Q4VWF1_9HERP Length = 215 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 72/236 (30%), Gaps = 35/236 (14%) Query: 35 DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 + L + W +E + D D+ L + + + D + Sbjct: 11 EDLNILRNLAIKNRWAEDEFMYTDDIKDFSRLDPEALDFYRFIFTFLSAADDKVNINL-D 69 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV----FDDIVTNEQIQKR 150 L L ++ + T E +HSR+Y + + N+ + V++ I+ + Sbjct: 70 QLKQLFPQKDVHHYYATQEDIECVHSRTYAGVQLALFNNDDDARRRYIEANVSHPTIETK 129 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + +++ E + + L + +E I F Sbjct: 130 FDWLNTKIMENESVPEKYLL------------------------------MILVEGIFFV 159 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 SFA + LI+RDEA+H + + N + P I Sbjct: 160 ASFASIAYLRNHGGFNSVCRSNDLISRDEAIHTQASCCIFNNYLKDHEMPTDERIR 215 >UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Geobacillus kaustophilus RepID=Q5QL41_GEOKA Length = 292 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 85/251 (33%), Gaps = 30/251 (11%) Query: 37 FEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 KL + + F W P+E+D+S D+ ++ L E + I + Sbjct: 32 AWKLYQMAIRFGTWNPQEIDLSEDKKHFKQLDEQRRAYLIHFCTGFWNAEENVALKFCPW 91 Query: 96 LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGIS 155 ++ + E + ++ T E H+ + ++ V + ++ + +RA + Sbjct: 92 IM-IAPSIEQQAFLSTQLVDEFKHTEFFIRYFAEVLQTDREVKVLNLVHDTLDERARQLL 150 Query: 156 SYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 S D+ E L G +E I+ V + Sbjct: 151 SVLDKGPEEREIAMLEGLVH------------------------YQGVIEGIQAMVGYEV 186 Query: 216 SFAFAER-ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECY 274 A + L G + + I RDE H+ L +++ + +P A+ +E +E Sbjct: 187 FEAVYGQYGLFPGLKEGFKQIKRDEGRHVGYG---LRMMKYLSKNPSYAKRIKELFEEFL 243 Query: 275 DLFVQAAQQEK 285 + QE Sbjct: 244 PKILVRYDQEI 254 >UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like protein n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZF52_NATMA Length = 309 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 98/312 (31%), Gaps = 38/312 (12%) Query: 31 QQKY---DIFEKLIEKQL-SFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 Y + +L K W P++ D+++DR D++ E E+H F++ + Sbjct: 2 PIDYSNREKSYELYRKGKREGTWDPDDYDLTQDREDWEQFSEAEQHRFLATCSGFYDGEE 61 Query: 87 IQGRSPNVALLPL---------ISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV 137 R+ ++ L + E ++ + E H+ ++ + + Sbjct: 62 DVTRTLAPYMMALDALPNDELPFDTVQEEMYLAQQVYEEAKHTDLFSRYFEEVFGTQNTA 121 Query: 138 FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 ++ + + D+L+ + + + E + Sbjct: 122 PYREGGYQEQGYSTDDLYDTADDLLAAVNSGDRTELVYSLGEAYLNYMGIVEAQLARGGY 181 Query: 198 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 L +E + ++E + I + +DE H+ + ++ L Sbjct: 182 LSFDQMIE--------LKATQMGRDSVLESFQQAIGKVRQDETRHIENGRWVMKQLAIAE 233 Query: 258 DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY--------V 309 D + Y+ ++ + + +D L+ D G + D + + Sbjct: 234 PD---------IVADVYEPRMEEYVENRLLSDPLYDDQPFEGYDPDRIGHQLVQYLQDTI 284 Query: 310 EYITNIRMQAVG 321 +YI R G Sbjct: 285 DYIGAERFDQYG 296 >UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S5_SULAC Length = 345 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 114/344 (33%), Gaps = 54/344 (15%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVD--VSRDRIDYQALPEHEKHIFISNLKYQT 82 ++ Y +L K FW P + + +D+ D++ + E E+ I + Sbjct: 23 KGIDWN--SYP--MRLWAKSNELFWSPLQFKELIQQDKQDWETMSESEREISEYIATAFS 78 Query: 83 LLDSIQGRSPNVALL--PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDD 140 + R ++ + E ++ + ET H+ ++ + +I D Sbjct: 79 AGEEAVSRYLAELVIALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDSIGMDKDT---- 134 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 +K I+ Y EL + G + L Sbjct: 135 -------EKWTTEINPSYYELFYVALPSAAYGVKA-----------NPSPESILRFTATY 176 Query: 201 VNALEAIRFYVSFACSFAFAERE-LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + ++E I F ER ++G +I++ +A DE+ HL ++ +L D Sbjct: 177 MFSIEGIAAETGFYFWRTMWERGRHLKGIYEIVKRVAADESRHLAFGTYLTTMLIGE--D 234 Query: 260 PEMAEIAEECKQE----CYDLFVQAAQQEKD-----------WADYLFRD---GSMIGLN 301 + + E L +Q+ + + ++++++ GS++ Sbjct: 235 QSLYDKFLEYFNYAGGLAVRLIGTIVEQQVNKWEPYKEKWGRYFEWVYKENGLGSLVDYA 294 Query: 302 KDILCQYVEYITNIRMQAVGLDLP-FQTRSNPIPWINTWLVSDN 344 ++ + Y+ R++ + + + P I + + Sbjct: 295 AKMVQHRLFYV--NRLRNANREKLRYMPLNEAAPVIENFDTVEK 336 >UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S8_SULAC Length = 330 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 86/290 (29%), Gaps = 34/290 (11%) Query: 5 TFSQTKNDQLKEPMF---FGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 S+ N + + F V ++ +L E F W E+D S+DR Sbjct: 2 INSEYGNTTKEGKILHNKFKSTVEGLDWNTFPM----RLFEIGEKFRWTAYELDFSKDRE 57 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV--ALLPLISIPELETWVETWAFSETIH 119 D++ L ++ Y + R + + + E ++ +A E H Sbjct: 58 DWKKLKPSDRTQNKIISSYFLAGEECVARDILPLANAMEELGLIEEALYLTQFARDEANH 117 Query: 120 SRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 + ++ ++ + + K +Y+ Sbjct: 118 TVAFRKWFESVGETEGI-------YDFTYKNEPYRRLFYE----------------IIPT 154 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF--AFAERELMEGNAKIIRLIAR 237 + + + + E I + + G K+++LI R Sbjct: 155 DMRRLYNDPSPENIVRAVVSYNFVAEGILAETGYYGYVKGYEKILPALPGLYKMVKLITR 214 Query: 238 DEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDW 287 DEA H++ ++ L+ S D + E Q ++ + + Sbjct: 215 DEARHISFGAYVAALMISMHGDSVLNEFNRYFGQLTQEIGFPLIEANRKI 264 >UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318F2 Length = 419 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 69/241 (28%), Gaps = 22/241 (9%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 +E L + WR E+D + D + + E+ + N + + + Sbjct: 12 YEDLYARWERGNWRATEIDFTADSEQWQERFDAFERRAALWNYSLFFHGEDAVADNLSPY 71 Query: 96 LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGIS 155 + + E + ++ T E H+ + + + +G Sbjct: 72 I-DAAPLEEQKYFLTTQQVDEARHAVFFKRFMHEVC-----------------DVGDGTM 113 Query: 156 SYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 + I+ W R K + +EA Sbjct: 114 AGGLAAIQPDLTWGFRRVFDRLDTMADELRRDRSKPKLAAALALYHLIVEATLAQSGQHF 173 Query: 216 SF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECY 274 +R+++ G +R + DE H+ +L L+ DPE E E +E Sbjct: 174 ITGYLEQRDVLPGFYGGMRNVEFDEQRHIGFGVKLLYDLQRE--DPECKEAVAELLREVL 231 Query: 275 D 275 Sbjct: 232 P 232 >UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q16J81_AEDAE Length = 244 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 3/103 (2%) Query: 53 EVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETW 112 EVD+S+D D++ L EKH L + D + + + E + Sbjct: 142 EVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYGFQ 201 Query: 113 AFSETIHSRSYTHIIRNIVND---PSVVFDDIVTNEQIQKRAE 152 E +HS Y+ +I + D +F+ I ++K+AE Sbjct: 202 IAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKAE 244 >UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187E616 Length = 184 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 2/103 (1%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHE 70 + +EP+ + +Y ++ +K + FW EE+D+S+D D+ + ++E Sbjct: 83 PESEEPLLKESKRRFVLF-PIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRMNDNE 141 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWA 113 +H L + D I + + E + Sbjct: 142 RHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQI 184 >UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L226_9VIRU Length = 371 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 31/246 (12%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 KQ++ W PEE+ +S+D+ + PE K I L + D+I ++ + + Sbjct: 72 YNFWLKQVALAWSPEEISLSKDKATFHRAPEQLKKISACMLGMLAIGDNIVLQNLSD-VS 130 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 +I+ + + E HS Y+ + + + V+ K I++ Sbjct: 131 EIITNNYVLNAISRQEDVEKTHSDFYSRSLDVLNDVGKSVY---------YKSEHFINNE 181 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 ++ + + L + E + F +F Sbjct: 182 LYDIQQFSKK---------------------HSTNNLNKIAFFIMICERLYFLPAFVTVA 220 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 A R + RDE LH +++ + E I E + Sbjct: 221 YLGITGYAPHTALGNRYVMRDENLHYNLWRNISANFEYKMNKQEALNILNEFEYILKCTI 280 Query: 278 VQAAQQ 283 + Sbjct: 281 KNIFKN 286 >UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXC9_CATAD Length = 353 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 65/216 (30%), Gaps = 23/216 (10%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 L + S W +D++RDR + L + +S L + +S R+ AL Sbjct: 50 DLYNRWESRQWSVAGLDLARDRRRFAELRPFARREILSALAELEIGESCVTRTL-SALAD 108 Query: 99 LISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYY 158 ++ T E H R + + ++ A + Sbjct: 109 HAPDEADRLYLCTQMADEARHVRFFQSYLSDV--------------------AGIAAEQL 148 Query: 159 DELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL--EAIRFYVSFACS 216 + M + T V R ++++ + L E + Sbjct: 149 EPHGAMGGESGFGVVYDPLLTRHTAAVRTRPDDRRVWHVAVVSYHLLAEGLLAVAGLRAL 208 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 A A+ + ++ + + RDEA H+T Sbjct: 209 RALAKSCELTALSEGLANVVRDEARHVTFGLAATRR 244 >UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Lactobacillus fermentum RepID=B2GEC7_LACF3 Length = 306 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 95/324 (29%), Gaps = 45/324 (13%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 +D+Q+ + + K + FW V ++ D+ + AL ++ L + L Sbjct: 6 YKAINWDEQEDQVDQATWLKLTNNFWLDTRVPITDDQPSWHALTAQQQAQVGHALAGRAL 65 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 L + Q +L + E + F E++H+++ T I R + + Sbjct: 66 LSAFQSELGAPSLRAGRRTQQEEAVLNLITFMESVHTKAVTTIFRRLTD----------- 114 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 +E W + + L L++ Sbjct: 115 ---------------EETTAAYYAWADGQAPLQAALTDLTKGIEGDDLMRRGLFLIADTV 159 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 L A + ++++ LI RD + + + Sbjct: 160 LCAGFDWAVLTQPALAQTNQMLKNILTGN-LIFRD------YLAYKFRQGIAELPFAKQE 212 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 + + + L A QQ + + G D+ V++ + + A+GL Sbjct: 213 ALVAQLTKGAQSLIKLAHQQNEALLEDA-------GAANDL----VDFQWRMLLVALGLG 261 Query: 324 LPFQTRSNPIPWINTWLVSDNVQV 347 S P+ L + + Sbjct: 262 EQ-PAESGPVAHQIDQLANQAQET 284 >UniRef50_A4X8S2 Putative uncharacterized protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4X8S2_SALTO Length = 321 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 91/327 (27%), Gaps = 82/327 (25%) Query: 27 ARYD-QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLD 85 +D + L E+ S W+ +VD + D + LP+ S D Sbjct: 13 LNWDYEATDPRLMALYERAKSAQWKVSDVDWTVDVPFGEPLPDD------SAFAMAAFAD 66 Query: 86 S---IQGRSPNVALLPLIS--------------------------IPELETWVETWAFSE 116 S +GR+ + + T A E Sbjct: 67 SPLAARGRAAWDDFRWEFQSWMVSQFLHGEQAAMVVAARLVAAVPDLDSKFCAATQAVDE 126 Query: 117 TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTH 176 H ++ +R + +P V Sbjct: 127 ARHVEVFSRYLREKIPEPYEV--------------------------------------- 147 Query: 177 TVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 + + + + + L +EAI SF S + L++ RL+A Sbjct: 148 SPPLRELLTDILSDSRWDVTALGMQIMVEAI-AMASFRLSNSSFHDPLIKNLT---RLVA 203 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFR--D 294 RDEA H+T L L E AE E+ E L Q W + Sbjct: 204 RDEARHVTFGVLSLRGLYGQLTTAERAER-EDLVLEAASLIRQRFLLGDIWQRLEVDRAE 262 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVG 321 G + +++ Y + + + A+G Sbjct: 263 GVSFAASHELMIMYRQAVFSRVAAALG 289 >UniRef50_B2H6U3 Conserved protein n=8 Tax=Bacteria RepID=B2H6U3_BURPS Length = 361 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 65/248 (26%), Gaps = 29/248 (11%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 + + + + W P + D +D A +++ ++ D Sbjct: 47 LEWK-IETPKLYDIYDSARDAGWSPHTLPW--DTLDVNAFTLDQRYAIAYWFALLSVFDG 103 Query: 87 IQGRSPNVALLPLISIPE---LETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 A++ E + + E H IR + D + ++ Sbjct: 104 SGPTVFARAMIHTYESKEEDPVRKCFFSVVRDEMNHEEVCGRAIRLLTPDGPLGYEPETA 163 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 ++ + L G+ G V L L A Sbjct: 164 LGKLARNN---------------VEWLYYNGSRYWTGFNRAVDKYPLPILFTSFLFGEVA 208 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 + F+ + + + + R I +DE HL +L L D + Sbjct: 209 -SSTLFHGMYQNTT-------IPVFKEAFRRIGQDEGRHLGICLTVLQKLLPQLTDQDKE 260 Query: 264 EIAEECKQ 271 I + + Sbjct: 261 MITIQLRA 268 >UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=D1VPU5_9ACTO Length = 396 Score = 91.0 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 78/316 (24%), Gaps = 72/316 (22%) Query: 35 DIFEKLIEKQLSFFWRP-EEVDVSRDRI------------------DYQALPEHEKHIFI 75 + L +K W +D S D + + + E+ Sbjct: 35 ERLLALYQKGKDKQWDAGTRIDWSLDVPYGRPLGLPDESVALFGTPVWDKMNDRERDEVR 94 Query: 76 SNLK---YQTLLDSIQGRSPNV-ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 +L + L QG ++ + + + + T E H Y + Sbjct: 95 RHLASWQFSQFLHGEQGAMICSARIVESVPDLDAKFYATTQTIDEARHVEVYARFLHE-- 152 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 L + K + Sbjct: 153 -------------------------------------KLGLVYPINDHLKALLDQTLSDS 175 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 + L +E +F + +++ + +DEA H+ + L Sbjct: 176 RWDIPYLGMQVLIEG-LALAAFGVLRDLTP---LPLPKQVLAYVMQDEARHVAFGRLALR 231 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL--NKDILCQYV 309 D E AE E + CY L + + WA L D + + Sbjct: 232 DYYRQLSDAERAEREEFAAEGCY-LMYERINGSEVWATLGLDIAESTELVKRSDYMRMFQ 290 Query: 310 EYITNIR---MQAVGL 322 + + M+ +GL Sbjct: 291 TLLFSRIVPCMRDIGL 306 >UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TH71_TETNG Length = 441 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 3/108 (2%) Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQIQK 149 + + E + E IHS Y+ +I + +PS +F+ I T ++K Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKK 293 Query: 150 RAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 +A+ ++ T T L + + LC Sbjct: 294 KADWALNWIGNQKASTVSARPTLRAAPTRRRPHSLPVLCSRRARGGLC 341 >UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=C7J3K0_ORYSJ Length = 162 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +N D++ QY+E++ + + A+G + +NP W+ L+S + E V Y Sbjct: 83 MNGDLMSQYIEFVADRLLMALGCKKMYNV-ANPFDWME--LISLQGKTNFFEKRVGDYQK 139 Query: 360 GQIDSEVD 367 + S ++ Sbjct: 140 ASVMSSLN 147 >UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K5J6_9ALVE Length = 157 Score = 78.3 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 45/96 (46%), Gaps = 4/96 (4%) Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 ++ + K E + + A E+++ G +IG+N +++ +Y+E++ + + A Sbjct: 18 QDLRDWETLTKNEQHFIKNSAVNVEREFITDALPVG-LIGMNAELMGRYIEFVADRLLVA 76 Query: 320 VGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 +G + + +NP W+ ++S + E V Sbjct: 77 LGYAKIYNS-ANPFDWMT--MISLQGKTNFFEKRVG 109 Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 22/36 (61%) Query: 41 IEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFIS 76 ++ + FW EE+D+ +D D++ L ++E+H + Sbjct: 1 YKQHEASFWTAEEIDLGQDLRDWETLTKNEQHFIKN 36 >UniRef50_UPI0001AF6C58 hypothetical protein MkanA1_14310 n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6C58 Length = 423 Score = 77.9 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 72/270 (26%), Gaps = 76/270 (28%) Query: 36 IFEKLIEKQLSFFWR-----PEEVDVSRDRIDYQALPE------------------HEK- 71 L + +S W P E+DV+ D D Q LP E+ Sbjct: 85 EMYDLYRRAVSKQWDGNADLPWELDVTPDNPDAQILPRSFVPFKEIEGFGVRLTALEERN 144 Query: 72 ---HIFISNLKYQTLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSETIHSRSYTHII 127 I L + QG A + + + + + T E H + + Sbjct: 145 LTWDIAAWLLSQFMHGE--QGALFASAQVTECVHWTDAKLYGATQVMDEGRHLEVFLRYL 202 Query: 128 RNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 + E I + D L + G Sbjct: 203 DT--------------------KLEKIYTVNDNLFVLIDELMTDGRWD------------ 230 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 + L +E +F F L++ ++++++ +DEA H+ Sbjct: 231 -------FKFLGMQIMIEG-LALGAFTTIFQQTREPLLK---QLLKMVIQDEARHVHYGV 279 Query: 248 HMLNLLRSGADDPEMAEIAEECKQECYDLF 277 L + + E + Y++ Sbjct: 280 LALRDHITQNI---SEKERREREDWVYEVA 306 >UniRef50_Q2J7V6 Putative uncharacterized protein n=1 Tax=Frankia sp. CcI3 RepID=Q2J7V6_FRASC Length = 372 Score = 74.8 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 87/322 (27%), Gaps = 73/322 (22%) Query: 35 DIFEKLIEKQLSFFWRPE-EVDVSRDRI------------------DYQALPEHEKHIFI 75 + L + W E ++D S D ++ LPE E+ Sbjct: 32 EQMLNLYSRGKQRQWDAETQLDWSHDVDPDNPLGLPDEFIWIAGTRVWERLPEAERTTVR 91 Query: 76 SNLK---YQTLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 ++ Y L QG A ++ + + + T E H +Y +++ + Sbjct: 92 QHIAGWLYSQFLHGEQGGLVCSAKVVQAVPDIASKFYAATQVMDEARHVEAYQRMLQAKI 151 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 + + + ++ Sbjct: 152 K---------------------------------------VHYPISTGLRGLLEAIIGDS 172 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELM--EGNAKIIRLIARDEALHLTGTQHM 249 + L +E +F+ +R+ M + + +DEA H+ + Sbjct: 173 RWDITYLGMQVMIEG-LALAAFSI-----QRDRMRDPLAQALNAYVLQDEARHVAFGRLA 226 Query: 250 LNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI--LCQ 307 L S E+ E + + C+ L + +E W + I L + Sbjct: 227 LRDYYSQLSTAELREREDFAVEACWVLKDRFVGEEM-WRKLDYGAEECIALANRSPAQRE 285 Query: 308 YVEYITNIRMQAVGLDLPFQTR 329 + + + + F R Sbjct: 286 FRRRVFTRIVPTLKDINLFGPR 307 >UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD87 Length = 104 Score = 71.7 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 + +++ Y + + E ++ + ++R+ + + +++Y N ++ +G + Sbjct: 3 KKMLEEKMYSILYSLMENEIEYTNVIYRESGLE----KEVVNFLKYNANRALENLGFEKL 58 Query: 326 FQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + + P + L ++ + + Y G + D D + Sbjct: 59 YTVDA-INPIVLNGLSTETKTHDFFSTKGNGYQKGVYEELEDEDFI 103 >UniRef50_B4R8K9 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Proteobacteria RepID=B4R8K9_PHEZH Length = 367 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 76/302 (25%), Gaps = 71/302 (23%) Query: 16 EPMFFGQPVNVARYD-QQKYDIFEKLIEKQLSFFWRPE-EVDVS---------------- 57 +F +D + +L E F W E +VD Sbjct: 35 REIFRTPLTGSYNWDYEAANARIRRLYELGKRFNWNSELDVDWGLQMPAPEGAPPEPEGF 94 Query: 58 RDRIDYQALPEHEKHIFIS-----NLKYQTLLDSIQGRSPNVALLPLISIPELETWVETW 112 D ++AL +K F+ L + L+ + + + + Sbjct: 95 ADHPKWKALSPEQKADFMRRTTAQTLSQFLHGEQG-ALMVASQLVSCAPTHDAKLYAASQ 153 Query: 113 AFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLG 172 F E H + + + ++ + + + Sbjct: 154 TFDEARHVEVFHRYLMERCHM---IYPINPNLKFLLDKV--------------------- 189 Query: 173 EGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKII 232 ++ + +E +F L++ +++ Sbjct: 190 ---------------LTDERWDLKFIGMQILIEG-LALAAFQTIHETTPDPLLK---QVV 230 Query: 233 RLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQA----AQQEKDWA 288 L+ RDE H+ + L E+ E A+ + C + + +E + Sbjct: 231 GLVMRDEGRHVAFGVNYLEDWIRALPQAEIEERAQFAYEACVVMKNRLISTNVAEEFGFT 290 Query: 289 DY 290 Sbjct: 291 RE 292 >UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacteria RepID=D2B211_STRRD Length = 371 Score = 67.5 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 29/274 (10%), Positives = 71/274 (25%), Gaps = 66/274 (24%) Query: 35 DIFEKLIEKQLSFFWR-PEEVDVSRDR------------------IDYQALPEHEKHIFI 75 D L +K W + +D + + + ++ Sbjct: 35 DRMLALYQKGKDKQWDSVKRIDWGLEVDPYNVLGIPDNTIAIHGTPLWDRMDARQRQEVR 94 Query: 76 SNLK---YQTLLDSIQGRSPNV-ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 + + L QG ++ + + + + T E H+ +Y ++ Sbjct: 95 LHGAAWQFSQFLHGEQGAMICSARIVESVPDLDSKFYAATQTMDEARHAETYARFLQE-- 152 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 + + K + + Sbjct: 153 -------------------------------------KVGLAYPINEHLKALLDNTLSDS 175 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 + L +E +F + L + +I+ + +DEA H+ + L Sbjct: 176 RWDMPYLGMQVLIEG-LALAAFGVMRDITTKPLPK---QILAYVMQDEARHVAFGRMALR 231 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEK 285 S + E+ E + + CY + + +E Sbjct: 232 DYYSQLTETELREREDFVIEGCYLMRDRLRGRET 265 >UniRef50_A9G4H5 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G4H5_SORC5 Length = 413 Score = 66.7 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 64/271 (23%), Gaps = 75/271 (27%) Query: 33 KYDIFEKLIEKQLSFFWRP-EEVDVSRDR--------------------IDYQALPEHEK 71 +L + W ++D SR + L E E+ Sbjct: 99 DDPDMARLYHLAKTSQWDAATDLDWSRSVDWLDPAMPLLPDGWMPPSKLPAWGRLSERER 158 Query: 72 H-----IFISNLKYQTLLDSIQGRSPN-VALLPLISIPELETWVETWAFSETIHSRSYTH 125 + L + QG + + + + + T E H + Sbjct: 159 ATQRHGLLSWMLSQFLHGE--QGALFAASQITECVPSLDAKLYGSTQVADEGRHVEVF-- 214 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 + + ++ E + D L + G Sbjct: 215 ------------------HAYLTQKLEKLYEINDNLYVVIDAIMSDG------------- 243 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + L +E +F L++ ++R + DEA H+ Sbjct: 244 ------RWDMKFLGMQIMIEG-LALGAFGSIRQVTSEPLLK---DVLRSVITDEARHVHY 293 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 L+ D E + +DL Sbjct: 294 GVLALSRFYREGIDER---ARREREDWAFDL 321 >UniRef50_A6GD89 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GD89_9DELT Length = 384 Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 33/290 (11%), Positives = 71/290 (24%), Gaps = 76/290 (26%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA----------------------LPE 68 + +L + W +++ D + L Sbjct: 61 PADFPEMAELYTRAKQGQWNGDDLPWHTDVDPFNPEVPLLPKSFLAAGDLSQELGMLLSP 120 Query: 69 HEKH-----IFISNLKYQTLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSETIHSRS 122 E+ + L + QG A + + + + + T E H Sbjct: 121 KEQRELAYSVICWMLSQFLHGE--QGALFAAAQVTEAVQFFDGKLYGATQVMDEGRHIEV 178 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +T + L N Sbjct: 179 FTRYLDQ---------------------------------------KLGRLYQINDNLFV 199 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 + SL + L + +E +F + L+ +++R++ +DEA H Sbjct: 200 ILDSLMTDSRWDMKFLGTQIMIEG-LALGAFGVLYKVTGEPLLR---ELLRMVIQDEARH 255 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQ---AAQQEKDWAD 289 + L + A + E+ E L A + ++W + Sbjct: 256 VHYGVLALREHFTKALSERERQEREDWAFEVALLMRNRFMAYEVYEEWFE 305 >UniRef50_C7Q987 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q987_CATAD Length = 430 Score = 65.2 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 90/350 (25%), Gaps = 75/350 (21%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFW-RPEEVDVSR- 58 M TT + D G V A YD +L W +D SR Sbjct: 1 MTVTTPTPADTDWTAP--LGGTAVLAADYDT-HDQQLLRLYALGKQRQWNSDSRLDWSRP 57 Query: 59 -DRID----------------YQALPEHEKHIFISNLKYQTLLDSIQGRSP----NVALL 97 D + + LP E + + + G + Sbjct: 58 VDPDNPLGMPDSFVWIAGSDLWDKLPTAEHSVLRRHAAAWASSQLLHGEQFSLVAVSKIA 117 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 + + + T E H+ ++ Sbjct: 118 QTAPEADAKLFAATQIMDEARHTEVINRLLTE---------------------------- 149 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 + T + ++ ++ + + + L LE + + A Sbjct: 150 -----------KIGLRYGLTGSLASLFENVVQDARWDFCALGVQVVLENL----ALATLT 194 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 +R + + +DEA H+ + ML E+ E + + C+ L Sbjct: 195 VQRDRTTEPLIRSLTTYVMQDEARHVAFGRIMLRRTYRDLTSAELREREDFVVESCWSL- 253 Query: 278 VQAAQQEKDWADYLFRDGSMIGLNKDI--LCQYVEYITNIR---MQAVGL 322 + E W + I + + L QY + ++ +GL Sbjct: 254 REGFVGEAIWNTLDYGAQECIAIARTSPALRQYRRRLFMRIVPALRDIGL 303 >UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42088_ARATH Length = 83 Score = 64.4 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPE 68 + + +EP+ Q + +Y ++ +K + FW EEVD+S D ++AL + Sbjct: 1 MEEGESEEPLLMAQNQRFTMF-PIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTD 59 Query: 69 HE 70 E Sbjct: 60 SE 61 >UniRef50_B2HNZ6 Putative uncharacterized protein n=7 Tax=Bacteria RepID=B2HNZ6_MYCMM Length = 366 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 78/305 (25%), Gaps = 68/305 (22%) Query: 37 FEKLIEKQLSFFWRPE-EVDVSRDR------------------IDYQALPEHEKHIFISN 77 L +K W + +D +D + A E + + Sbjct: 37 LLSLYQKGKDKQWDAQSRIDWGQDVDPMNAIALPDEFHPLFGSPMWNAADEARRSEMRQH 96 Query: 78 L-KYQ--TLLDSIQGRSP-NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 +Q L QG ++ ++ + + + T E H +++ ++ Sbjct: 97 FQAWQFSQFLHGEQGAMVCAAKIVEVVPDLDAKFYAATQTMDEARHVEAFSRFLQE---- 152 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 + + + + Sbjct: 153 -----------------------------------KIGLVYPINKHLTALLDDTLRDSRW 177 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLL 253 L +E +F A E + +++ + +DEA H+ + L Sbjct: 178 DMPYLGMQVLIEG-LALAAFGVLRDMAAPESL--AKQVLAYVMQDEARHVAFGRISLKDY 234 Query: 254 RSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL--NKDILCQYVEY 311 S + E E E CY L + E+ + + ++ Q+ + Sbjct: 235 YSALTEAEREEREEFVVDACY-LMRDRFRGEEVFETLGMDVKACAEWVDTSPLMIQFRSH 293 Query: 312 ITNIR 316 + + Sbjct: 294 LFSRI 298 >UniRef50_Q47J53 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q47J53_DECAR Length = 342 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 82/269 (30%), Gaps = 32/269 (11%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 ++ K +++ E L W PE++ D +D + E+ ++ D+ Sbjct: 26 LSWNS-KTKKLQEVWEASLRENWDPEKLPW--DTLDVDSYTWEERESIAYWWSLLSVFDA 82 Query: 87 IQGRSPNVALLPLISIPE---LETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 AL+ + E + + E H I ++ P + + T Sbjct: 83 SAPPVFAEALIKTYEVHEEDPVRKCFFSVTRDEQNHEIMCGLAITKMLGHPDPITYEPKT 142 Query: 144 N--EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 + ++QK + + G+ G V +L LM Sbjct: 143 DLGRRLQKNVKWL----------------YFNGSRYWTGYKQAVPKYDLAVLFSSFLMGE 186 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 I F F + + + + + I RDE H+ ++ G + Sbjct: 187 -----IAAATIFKQMFDNSREAVFK---EGFKNIGRDEGRHMAICMAVMERDYPGLKEET 238 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADY 290 A + ++ + L + ++ D Sbjct: 239 KAIVTKQIRAGYLFLSAVLFEPPMEFWDL 267 >UniRef50_C1V565 Putative uncharacterized protein n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V565_9EURY Length = 130 Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 11/114 (9%), Positives = 33/114 (28%), Gaps = 4/114 (3%) Query: 56 VSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFS 115 ++ DR L + + + L + + +V + + Sbjct: 1 MAADRAAISDLGRSAFTQLRATIAMFGAGEENVTEDLVP-LAATTTNKTDQRFVASHIYE 59 Query: 116 ETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWH 169 E H+ + ++++ T+ + ++ Y+E+ T Sbjct: 60 EAKHAAFFERYWKDVIRPAEDARGLDPTDPTADR---WFTAAYEEIFNRTETAM 110 >UniRef50_D0LTN7 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTN7_HALO1 Length = 408 Score = 57.4 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 83/336 (24%), Gaps = 88/336 (26%) Query: 27 ARYD-QQKYDIFEKLIEKQLSFFWR-----PEEVDVSRD-----------------RIDY 63 + +L + W P ++DV + Sbjct: 72 FNWSYPSDNGEMAELYARAKQGQWDGDSYLPWDIDVDPENPERAIIPEQFFAFELLAEFG 131 Query: 64 QALPEHEKHIFISNLK---YQTLLDSIQGRSPNVALLPLISIPEL------ETWVETWAF 114 L E E+ + ++ L QG AL+ + E + + T Sbjct: 132 VRLSERERRQLLHSMAAWMLSQFLHGEQG-----ALMAAAQVTEAVQFFDGKLYGSTQVV 186 Query: 115 SETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEG 174 E H + + L Sbjct: 187 DEGRHVEVFHRYLDT---------------------------------------KLEKLY 207 Query: 175 THTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRL 234 N + +L E + L +E +F + L++ +++R+ Sbjct: 208 QINDNLFVIIDALMEDSRWDMKFLGMQIMVEG-LALGAFGVLYQNTREPLLK---ELLRM 263 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQ---AAQQEKDWADYL 291 + +DEA H+ L A E+ E L A + ++W + Sbjct: 264 VIQDEARHVHYGVLALREHFREALSERERIEREDWAFEVALLMRNRFMAYEVYEEWFEGS 323 Query: 292 FRDGSM--IGLNKDILCQYVEYITNIR---MQAVGL 322 F Q+ + N ++ +GL Sbjct: 324 FSRDQWRRFVAASPGFEQFRHVMFNRLVPNLREIGL 359 >UniRef50_B4EPX9 Putative uncharacterized protein n=30 Tax=Burkholderia RepID=B4EPX9_BURCJ Length = 327 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 69/299 (23%), Gaps = 79/299 (26%) Query: 37 FEKLIEKQLSFFWR-PEEVDVSRDR------------------IDYQALPEHEKHIFIS- 76 +L EK + W +VD D + L + +K Sbjct: 35 LNRLYEKAKAAQWDVATDVDWRHDLDPANPLGMPDPTLLIYGTELWGKLADADKREVRHH 94 Query: 77 ----NLKYQTLLDSIQGRSP-NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 L + Q L + E H +Y ++ Sbjct: 95 AQGWLLSQILHGE--QAALICASKLASAENGLSARLCAAAQMMDEARHVEAYAKLV---- 148 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 L + + K + Sbjct: 149 -----------------------------------NEKLDVSYPMSRSLKGLLHDTITSS 173 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 L +E I F A++ ++ + I RDEA H + L Sbjct: 174 ALDMTNLGMQVLVEGI-ALSIFQSVVAYSTDPFIK---DLFLRIQRDEARHFAVGRITLC 229 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + + E+ E E + A E AD ++ +GL++ V Sbjct: 230 RVYAEMSSHELREREEFICEGA------AVLYEHLCADDIW---EPMGLSRRECSAMVR 279 >UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=5 Tax=rosids RepID=D1II58_VITVI Length = 301 Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 + +F F +R LM G LI+RDE LH + + Sbjct: 6 LFLVFNFCDIFW-KKRGLMPGLTFSNELISRDEGLHCDFACLLYKNRKPQ 54 >UniRef50_C5CMN9 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CMN9_VARPS Length = 302 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 62/239 (25%), Gaps = 44/239 (18%) Query: 31 QQKYDIFEKLIEKQLSFFWRP-EEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQG 89 + +Y +L + W P ++D S D LP + + ++ Sbjct: 21 KIEYPEVWRLCTQARDLAWNPIADIDYS-DLQK-ADLPPEVRKAGAEWWSLRAWMEHGAT 78 Query: 90 RSPNVALLPLI---SIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 L I E++ + + E H + I + + Sbjct: 79 PYGAERLREAIFQHQPFEVKQHITNFIAEEFRHHEASFRIADAL--------AEYEPMP- 129 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 R++ + + + +VN L Sbjct: 130 ---RSDYFKDIIPRFHDESDEKAMSFFAGLSVNTLFEQ-------------------LSG 167 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 + E + ++ RLI RDEA H+ + ++ S E I Sbjct: 168 DLLQARY-------ENARFDSIREVCRLILRDEARHIQFGRIIMRRFFSELPSEEKRLI 219 >UniRef50_Q4J6K5 Conserved protein n=13 Tax=Sulfolobaceae RepID=Q4J6K5_SULAC Length = 342 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 74/272 (27%), Gaps = 33/272 (12%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQ------QKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 + E + F + Y+ + +L + W + +D R + Sbjct: 1 MSKENKYESINFEESPTYPEYNIYPPIWDFDNERAWQLYRRAKKEQWDEDNIDWRR-VKE 59 Query: 63 YQA-LPEHEKHIFISNLKYQTLLD--SIQGRSPNVALLPLISIPELETWVETWAFSETIH 119 + + L ++ + D + V + + T + E H Sbjct: 60 WMSGLDRKQRLAIAYWYGLLSNFDHATPVFAYAVVKSFEHHLDTAVRGILTTITWDENRH 119 Query: 120 SRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 + I+N + + F ++K+A M + + G+ Sbjct: 120 NLVCGLAIKNAMEGFPLNFKPQDD---LEKKA------------MLNVQWVWWNGSRYWK 164 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 L +M A + + + E +KI + A DE Sbjct: 165 AYLDAYKKYALDVLFTSFMMGEAAATTVF--------TSMGKNAKNEEFSKIFKNTAVDE 216 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 H T ++ ++ + ++ + Sbjct: 217 TRHYAFTHLIMTQNAPNMNEDRKKLVTKQIRA 248 >UniRef50_A9C0R4 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C0R4_DELAS Length = 422 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 84/298 (28%), Gaps = 64/298 (21%) Query: 39 KLIEKQLSFFWRPE-EVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS---IQGRSPNV 94 L + ++ W + ++D D LP + + + Y ++ + Sbjct: 160 DLYAQAVAAQWNADTDIDW----CDAPELPAPVEDAIVQLMTYMVENENAALLVPARFLG 215 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGI 154 L P EL+ + E H +T IR +P Sbjct: 216 QLHPHYR--ELQAALAIQVADEARHIDVFTRRIRRHGREP-------------------- 253 Query: 155 SSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFA 214 T G+ SL + + E F Sbjct: 254 -------------------ALSTAGGQASLKSLLDETDFSVAGFLLSVLGEGT-----FV 289 Query: 215 CSFAFAERELM-EGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQEC 273 F + E +I RL ARDEA H+ L L R + ++A+ +Q Sbjct: 290 HLLQFLQTEAPDPLTRQICRLAARDEARHVALGMSHL-LYRLQHEPGFQHQLAQAVEQRF 348 Query: 274 YDLFVQAAQQEKDWADYLFR-----DGSMIGLNKDILCQYVEYITNIR---MQAVGLD 323 +L + E+ + + + + Q + + + R + +G + Sbjct: 349 DNLAGTSGLNEEVFDALILIAAGALTPEALARGAARVQQLMRDMADGRFSKLLRLGFE 406 >UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1II57_VITVI Length = 75 Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 340 +N ++ QY++++ + + A+G + + NP W+ Sbjct: 1 MNATLMSQYIKFVADHLLVAIGYERKYNVE-NPFDWMEFIS 40 >UniRef50_C6WBU0 Putative uncharacterized protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WBU0_ACTMD Length = 315 Score = 44.0 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 49/192 (25%), Gaps = 26/192 (13%) Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 + I ++T+ + R+ + + + T E H+R + I + Sbjct: 69 RDALIQEFAFRTIAEEKVTRALGHLVAA-APNRVMTEFFSTQLLDEARHARVFRDHIIEV 127 Query: 131 VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 + V D I + +++ + + Sbjct: 128 GVPEAEVDDVITEV---------AGKAIETVLDPLEAFGVSVIRDQGD------------ 166 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 + +E + + E + A+I R DE HL+ ++ Sbjct: 167 --FYGGVITLTILVEGVLAPFGELSERKWVELD--PAGAEIERGAGMDEIRHLSVGSSVI 222 Query: 251 NLLRSGADDPEM 262 M Sbjct: 223 KRHLQEQPGERM 234 >UniRef50_Q970H5 Putative uncharacterized protein ST1620 n=1 Tax=Sulfolobus tokodaii RepID=Q970H5_SULTO Length = 212 Score = 43.6 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 64/192 (33%), Gaps = 15/192 (7%) Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 I++ + + + + + + I++ +++E + + ++ + Sbjct: 34 ILKKLSFEKAKIIANYSLQQVIEEIEHF--DFFNEYFKEDPLTTVRLPPSYIKLFDGLVE 91 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + + + + E + V + + + + I+ I DEA H++ Sbjct: 92 DFQSSRWRENIATRFHMITEGVLATVGLKILNETSRKYNLLKFNEGIKRIIEDEARHVSF 151 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 ++ E E + +LF A Q K+ D + G I +++ Sbjct: 152 GLSLI-------------EDKEYAVKRVEELFPLAVQIVKEGKDKIEPLGYSIQELVNLM 198 Query: 306 CQYVEYITNIRM 317 + + N + Sbjct: 199 EELKKARINKIL 210 >UniRef50_B6BHF4 Putative uncharacterized protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHF4_9PROT Length = 419 Score = 43.2 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 39/335 (11%), Positives = 85/335 (25%), Gaps = 69/335 (20%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFE-----KLIEKQLSFFWRPE-EVDVSRDRI 61 + + + + KL E+ + W ++ + Sbjct: 121 PPNHGLMGRGTIIENGSIEYDFGINHKEQLWAEPVSKLYEEAKNAQWNATSDIAW-NEIP 179 Query: 62 DYQALPEHEKHIFISNLKYQTLLD---SIQGRSPNVALLPLISIPELETWVETWAFSETI 118 DY P+ E+ + Y + + P + E+ ++ + E Sbjct: 180 DYD--PKFEQ-AICQIMTYLIENEFSALYIPGKFISQMNPYYT--EIPLFLGSLMNDEAR 234 Query: 119 HSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 H +T + + G + Sbjct: 235 HIEVFT---------------------------------------KRVHANGGGMQYSSS 255 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELME--GNAKIIRLIA 236 + SL + + E F F E M KI++ + Sbjct: 256 VTQRSLYSLFNEDDYVKSSFLLHVMGEGT-----FIDLLKFLEE-YMPDATTKKILQYVR 309 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEEC--KQECYDLFVQAAQQEKDWADYLFRD 294 RDE+ H+ L + A K+ +L ++ + + + D Sbjct: 310 RDESRHVAYGMAHLKSVLEQNPKKINALKEAAFKRKEFMDELNGESTLLLEAMSTLVGGD 369 Query: 295 GSMIGLNK-----DILCQYVEYITNIRMQAVGLDL 324 S+ K L + ++ R+ +G+D Sbjct: 370 DSIASYKKGYEAVTELKKRMDINRVKRLVDIGIDE 404 >UniRef50_Q7NUN8 Probable phenylacetic acid degradation protein paaA n=1 Tax=Chromobacterium violaceum RepID=Q7NUN8_CHRVO Length = 259 Score = 42.4 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 73/268 (27%), Gaps = 54/268 (20%) Query: 51 PEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVE 110 P EV + ++P+ + I L + G + + PL + Sbjct: 22 PHEVSLET----IDSMPDEYRDTLIHQLLANGEGELSAGDTYIDSFYPLAPDADERYICA 77 Query: 111 TWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHL 170 +A E H R ++ ++ + D S + QK+AE + + W Sbjct: 78 QFAAEEVDHFRRFSRLLAELEVDTSHMLS--------QKKAERRYFAAESMTTDFRSWE- 128 Query: 171 LGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAK 230 E + A+ Sbjct: 129 -------------------------ERAAFSFLCE----LEGHYQIKEMVSSSYLPLRAE 159 Query: 231 IIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAA--------Q 282 + ++EA H + + +R A D + A++ Y + + Sbjct: 160 A-EAVLKEEARHFSHGALL---MRRAAKDGDARARAQDALDRLYPMAMDMFGRSDSHRSD 215 Query: 283 QEKDWADYLFRDGSMIGLNKDILCQYVE 310 W + +G + +D + +++ Sbjct: 216 AAVSWGLRQYTNGQLRDRYRDDVRGHIQ 243 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit b... 324 3e-87 UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subun... 323 6e-87 UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit bet... 317 5e-85 UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 ... 307 6e-82 UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit bet... 303 6e-81 UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 ... 291 2e-77 UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornu... 285 2e-75 UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain ... 282 1e-74 UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative... 277 4e-73 UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain... 274 4e-72 UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclass... 272 2e-71 UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepI... 272 2e-71 UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit bet... 271 2e-71 UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit bet... 270 6e-71 UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprino... 269 1e-70 UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subun... 268 3e-70 UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit bet... 265 1e-69 UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit bet... 265 2e-69 UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 264 4e-69 UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=roo... 263 7e-69 UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=S... 259 1e-67 UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subuni... 259 1e-67 UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=r... 258 2e-67 UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subun... 257 4e-67 UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Pr... 254 4e-66 UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Ver... 254 5e-66 UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subun... 253 7e-66 UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit bet... 253 7e-66 UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 252 2e-65 UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subuni... 250 5e-65 UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=... 250 8e-65 UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subun... 249 1e-64 UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Ba... 247 5e-64 UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 246 1e-63 UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=... 246 1e-63 UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 T... 245 2e-63 UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain ... 243 6e-63 UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_S... 243 7e-63 UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Ba... 240 8e-62 UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 240 9e-62 UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subuni... 240 1e-61 UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subuni... 239 1e-61 UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain... 238 4e-61 UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase sm... 237 6e-61 UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=A... 235 2e-60 UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain... 235 2e-60 UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subuni... 234 4e-60 UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subun... 234 4e-60 UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 T... 232 2e-59 UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=ce... 228 2e-58 UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain ... 228 4e-58 UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subuni... 227 5e-58 UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD 226 8e-58 UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta sub... 225 2e-57 UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain... 224 6e-57 UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase sm... 223 7e-57 UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase be... 222 2e-56 UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit bet... 221 3e-56 UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain... 217 4e-55 UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subu... 217 6e-55 UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subun... 216 1e-54 UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit bet... 216 1e-54 UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate redu... 216 1e-54 UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib be... 215 2e-54 UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diph... 213 8e-54 UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subu... 213 1e-53 UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosph... 212 2e-53 UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystiviru... 211 3e-53 UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 210 7e-53 UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit bet... 209 1e-52 UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subuni... 209 1e-52 UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subun... 209 2e-52 UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 209 2e-52 UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chai... 208 3e-52 UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Dei... 208 3e-52 UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta sub... 205 2e-51 UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain ... 204 4e-51 UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit bet... 203 9e-51 UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Ba... 198 3e-49 UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7... 194 3e-48 UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subun... 192 1e-47 UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderw... 190 7e-47 UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), ... 185 2e-45 UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain ... 184 5e-45 UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseud... 180 6e-44 UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 ... 178 3e-43 UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain... 177 5e-43 UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome s... 177 5e-43 UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclass... 176 9e-43 UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderw... 175 2e-42 UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium ... 174 5e-42 UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subun... 171 3e-41 UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Envi... 171 4e-41 UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 T... 167 7e-40 UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain... 167 8e-40 UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_... 165 3e-39 UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepI... 161 3e-38 UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib be... 161 4e-38 UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Mar... 160 7e-38 UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida... 159 2e-37 UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomyc... 159 2e-37 UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain ... 157 8e-37 UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomy... 156 9e-37 UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepI... 156 2e-36 UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain... 153 8e-36 UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain ... 152 1e-35 UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomy... 152 2e-35 UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae... 151 5e-35 UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, s... 151 5e-35 UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative ... 149 2e-34 UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae Rep... 148 4e-34 UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Bru... 142 1e-32 UniRef50_D2S309 Ribonucleotide reductase beta subunit-like prote... 141 3e-32 UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena t... 141 4e-32 UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS 141 5e-32 UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus Rep... 139 1e-31 UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=C... 138 3e-31 UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theil... 134 5e-30 UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Coryne... 132 2e-29 UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexiba... 132 3e-29 UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n... 131 4e-29 UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema m... 129 2e-28 UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, b... 128 3e-28 UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyos... 126 1e-27 UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subuni... 126 1e-27 UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC... 126 1e-27 UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus... 125 3e-27 UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia... 124 4e-27 UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Su... 124 5e-27 UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolo... 123 1e-26 UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH 122 2e-26 UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like prote... 122 2e-26 UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Ge... 121 3e-26 UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, b... 121 3e-26 UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment... 118 4e-25 UniRef50_Q2J7V6 Putative uncharacterized protein n=1 Tax=Frankia... 116 2e-24 UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Con... 115 4e-24 UniRef50_C7Q987 Putative uncharacterized protein n=1 Tax=Catenul... 114 5e-24 UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenul... 113 9e-24 UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=M... 113 1e-23 UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subuni... 113 1e-23 UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes a... 112 1e-23 UniRef50_A4X8S2 Putative uncharacterized protein n=1 Tax=Salinis... 109 1e-22 UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=G... 108 4e-22 UniRef50_B2H6U3 Conserved protein n=8 Tax=Bacteria RepID=B2H6U3_... 104 4e-21 UniRef50_A6GD89 Putative uncharacterized protein n=1 Tax=Plesioc... 103 1e-20 UniRef50_B4R8K9 Ribonucleoside-diphosphate reductase beta chain ... 102 2e-20 UniRef50_UPI0001AF6C58 hypothetical protein MkanA1_14310 n=1 Tax... 101 5e-20 UniRef50_B2HNZ6 Putative uncharacterized protein n=7 Tax=Bacteri... 100 8e-20 UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacter... 100 1e-19 UniRef50_A9G4H5 Putative uncharacterized protein n=1 Tax=Sorangi... 99 3e-19 UniRef50_Q47J53 Putative uncharacterized protein n=3 Tax=Proteob... 97 1e-18 UniRef50_D0LTN7 Putative uncharacterized protein n=1 Tax=Haliang... 96 2e-18 UniRef50_B4EPX9 Putative uncharacterized protein n=30 Tax=Burkho... 91 6e-17 UniRef50_Q4J6K5 Conserved protein n=13 Tax=Sulfolobaceae RepID=Q... 90 1e-16 UniRef50_C5CMN9 Putative uncharacterized protein n=1 Tax=Variovo... 89 3e-16 UniRef50_A9C0R4 Putative uncharacterized protein n=1 Tax=Delftia... 88 4e-16 UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome s... 83 1e-14 UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sa... 83 1e-14 UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain... 81 1e-13 UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 T... 72 3e-11 UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment... 62 3e-08 UniRef50_C1V565 Putative uncharacterized protein n=1 Tax=Halogeo... 56 3e-06 UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, s... 54 7e-06 Sequences not found previously or not previously below threshold: UniRef50_C7PXD9 Putative uncharacterized protein n=1 Tax=Catenul... 59 2e-07 UniRef50_B6BHF4 Putative uncharacterized protein n=1 Tax=Campylo... 54 7e-06 UniRef50_C6WBU0 Putative uncharacterized protein n=1 Tax=Actinos... 47 0.001 UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, s... 46 0.003 UniRef50_Q7NUN8 Probable phenylacetic acid degradation protein p... 45 0.004 UniRef50_Q970H5 Putative uncharacterized protein ST1620 n=1 Tax=... 44 0.011 UniRef50_A4YGC3 Putative uncharacterized protein n=1 Tax=Metallo... 41 0.081 UniRef50_B1W0E8 Putative uncharacterized protein n=4 Tax=Strepto... 41 0.093 >UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit beta n=294 Tax=root RepID=RIR2_ECO57 Length = 376 Score = 324 bits (830), Expect = 3e-87, Method: Composition-based stats. Identities = 376/376 (100%), Positives = 376/376 (100%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR Sbjct: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS Sbjct: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG Sbjct: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA Sbjct: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL Sbjct: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDSEVDTDDLSNFQL Sbjct: 361 QIDSEVDTDDLSNFQL 376 >UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subunit n=2 Tax=Eukaryota RepID=A8IKH1_CHLRE Length = 493 Score = 323 bits (828), Expect = 6e-87, Method: Composition-based stats. Identities = 72/368 (19%), Positives = 137/368 (37%), Gaps = 49/368 (13%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPE 68 +++ L E + P + KY + ++ ++ FW EEVD + D ID+ L Sbjct: 160 SRSTLLDEDLLRENPNRFTLF-PIKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKP 218 Query: 69 HEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 E+ L + D I + + I +PE + E +HS Y+ ++ Sbjct: 219 EEQRFIKYVLAFFAASDGIVMENLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLD 278 Query: 129 NIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 + V +P +FD I T + K+AE + Sbjct: 279 HYVREPEERNQLFDAIHTIPTVAKKAEWAMRWI--------------------------- 311 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 L+ +E I F SF F +R LM G + LI+RDE LH Sbjct: 312 ---SSSNVFAERLVGFACVEGIHFSGSFCSIFWLKKRCLMPGLSFSNVLISRDEGLHCDF 368 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 + + L++ ++ + +A Q E ++ ++G+N D++ Sbjct: 369 ACCLYSHLKNRLS-----------RERVLQIVDEAVQLEDEFCTEALS-CELLGMNADLM 416 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSE 365 QY+ ++ + + ++G + + TR NP W+ ++S + E V Y + Sbjct: 417 RQYIRFVADRLLVSLGYEKHYNTR-NPFDWME--MISLQGKANFFERRVGEYQRAGVMGG 473 Query: 366 VDTDDLSN 373 + + + Sbjct: 474 NNGNSARD 481 >UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit beta n=58 Tax=root RepID=RIR2_HAEIN Length = 376 Score = 317 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 321/376 (85%), Positives = 346/376 (92%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQ KNDQLKEPMFFGQ VNVARYDQQKY+ FEKLIEKQLSFFWRPEEVDVS+DR Sbjct: 1 MAYTTFSQNKNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDY ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPL+SIPELETW+ETW FSETIHS Sbjct: 61 IDYAALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPS+VFDDIVTNE+I KRA+ ISSYYD+LI + + L GEGT+TV+G Sbjct: 121 RSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYGLYGEGTYTVDG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K V+LR LKK+LYLCLMSVNALEAIRFYVSFACSFAFAER LMEGNAKII+ IARDEA Sbjct: 181 KECVVTLRSLKKQLYLCLMSVNALEAIRFYVSFACSFAFAERRLMEGNAKIIKFIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQH+LN++ +G DDPEMAEIAEECKQE YDLFV AA+QEK WADYLF+DGSMIGL Sbjct: 241 LHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N+DIL QYVEYITNIRMQAVGL LPFQTRSNPIPWIN WLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDS+VDT+D +F L Sbjct: 361 QIDSKVDTNDFDDFSL 376 >UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 n=93 Tax=root RepID=RIR2_HUMAN Length = 389 Score = 307 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 133/362 (36%), Gaps = 48/362 (13%) Query: 13 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKH 72 EP+ P + +Y ++ +K + FW EEVD+S+D +++L E++ Sbjct: 67 VEDEPLLRENPRRFVIF-PIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERY 125 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 L + D I + + I E + E IHS Y+ +I + Sbjct: 126 FISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIK 185 Query: 133 DPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRE 189 DP +F+ I T ++K+A+ + + Sbjct: 186 DPKEREFLFNAIETMPCVKKKADWALRWIG-----------------------------D 216 Query: 190 LKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHM 249 + +++ A+E I F SFA F +R LM G LI+RDE LH M Sbjct: 217 KEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLM 276 Query: 250 LNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYV 309 L + + ++ + A + E+++ +IG+N ++ QY+ Sbjct: 277 FKHLVHKPSE-----------ERVREIIINAVRIEQEFLTEALP-VKLIGMNCTLMKQYI 324 Query: 310 EYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 E++ + M +G F+ NP ++ +S + E V Y + S + Sbjct: 325 EFVADRLMLELGFSKVFRVE-NPFDFMEN--ISLEGKTNFFEKRVGEYQRMGVMSSPTEN 381 Query: 370 DL 371 Sbjct: 382 SF 383 >UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit beta n=48 Tax=root RepID=RIR2_BUCBP Length = 376 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 275/376 (73%), Positives = 333/376 (88%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M YTTFS+ KN+QL EPMFFGQ VN++RYDQQKY+IFEKLIEKQLSFFWRPEEVD+SRD Sbjct: 1 MTYTTFSKNKNNQLYEPMFFGQSVNISRYDQQKYEIFEKLIEKQLSFFWRPEEVDLSRDY 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 ID+Q LP+HEKHIF+SNLKYQTLLDSIQGRSPN+ALLP++S+PELETW+ETW+FSETIHS Sbjct: 61 IDFQNLPQHEKHIFVSNLKYQTLLDSIQGRSPNIALLPIVSLPELETWIETWSFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNI+N PS++FDDI+ N+ I RA+ I+ YYD+LIE+TSYWHL GEG HT+NG Sbjct: 121 RSYTHIIRNIINTPSLIFDDIIDNKNIANRAKDIAKYYDDLIELTSYWHLFGEGKHTING 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K + + L ELKKKLYLCL+SVNALEAIRFYVSFACSFAFAERE MEGNAKIIRLIARDEA Sbjct: 181 KKIKIDLHELKKKLYLCLISVNALEAIRFYVSFACSFAFAEREKMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLT TQH+LN+L + ++ M++I++EC +ECY LF++ + QEK WA YLF++GSM+GL Sbjct: 241 LHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGSMLGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N++IL QY+EYITNIRM+A+GL PF+ SNPIPWIN+WL+SDNVQVAPQE+ VSSYL+G Sbjct: 301 NQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWINSWLISDNVQVAPQEISVSSYLIG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QI+SE++ D F+L Sbjct: 361 QINSEINDSDFEKFKL 376 >UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 B n=134 Tax=root RepID=RIR2B_HUMAN Length = 351 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 74/373 (19%), Positives = 142/373 (38%), Gaps = 48/373 (12%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 + + ++++ +EP+ + +Y K+ ++ + FW EEVD+S+D Sbjct: 18 SSSDTNESEIKSNEEPLLRKSSRRFVIF-PIQYPDIWKMYKQAQASFWTAEEVDLSKDLP 76 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 + L EK+ L + D I + + +PE + E +HS Sbjct: 77 HWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSE 136 Query: 122 SYTHIIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 Y+ +I + DP +F+ I T ++K+A+ + Sbjct: 137 MYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI-------------------- 176 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + K +++ A+E + F SFA F +R LM G LI+RD Sbjct: 177 ---------ADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRD 227 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E LH M L + + + ++ V A + E+++ G +I Sbjct: 228 EGLHCDFACLMFQYLVNKPSE-----------ERVREIIVDAVKIEQEFLTEALPVG-LI 275 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 G+N ++ QY+E++ + + +G FQ NP ++ +S + E VS Y Sbjct: 276 GMNCILMKQYIEFVADRLLVELGFSKVFQAE-NPFDFMEN--ISLEGKTNFFEKRVSEYQ 332 Query: 359 VGQIDSEVDTDDL 371 + +E + Sbjct: 333 RFAVMAETTDNVF 345 >UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPK4_PHATR Length = 409 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 130/343 (37%), Gaps = 49/343 (14%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQG 89 ++D + ++ ++ FW +E+D+S D D+ L ++E+H L + D I Sbjct: 98 PIEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLAFFAGADGIVV 157 Query: 90 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQ 146 + +++PE + E IH +Y +I + ++DP +F Sbjct: 158 ENLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFAAHTKVPS 217 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 ++K+A Y L++ A+E Sbjct: 218 VEKKARWAQRYIGS------------------------------DASFAERLVAFAAVEG 247 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 I F +F F +R LM G LI+RDE LH + + + L + Sbjct: 248 IFFSGAFCSIFWLKKRGLMPGLTFSNELISRDEGLHCSFACQLYSKLERKLSE------- 300 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + L +A + EK + G +IG+N ++ QYVE++ + + +G + Sbjct: 301 ----TDMHKLIGEAVEVEKGFVCDALPVG-LIGMNASLMSQYVEFVADRLLHDLGYRTLY 355 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 + NP W++ ++S + E V Y + + + D Sbjct: 356 GS-KNPFDWMD--MISLEGKTNFFEKRVGEYQKSGVMASLSDD 395 >UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain n=43 Tax=Bacteria RepID=B4E5V8_BURCJ Length = 403 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 81/359 (22%), Positives = 150/359 (41%), Gaps = 26/359 (7%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA- 65 ++ + + + + GQ +V + KY + + W P+E+++SRD ++ Sbjct: 64 TEARVNVADKRIINGQ-TDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDP 122 Query: 66 --LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 L E E+ I NL + DS+ + + I+ PE ++ AF E IH+ +Y Sbjct: 123 NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 182 Query: 124 THIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 +I+ ++ D +F+ I+ + E + + L + Sbjct: 183 QYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTG-------------- 228 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 +L +K L ++ +E + FYV F A + M G A+ + I RDE++H Sbjct: 229 --TLEADQKLLKSLIVFACIMEGLFFYVGFTQILALGRQNKMTGAAEQYQYILRDESMHC 286 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 ++N ++ E + E +LF QA + E +A+ G ++GLN Sbjct: 287 NFGIDLINQIKLENP----HLWTAEFRAEIRELFKQAVELEYRYAEDTMPRG-VLGLNAS 341 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + Y+ +I+N R Q +GLD F NP PW++ ++ + E V Y G Sbjct: 342 MFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSE-MIDLKKERNFFETRVIEYQTGGA 399 >UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative n=11 Tax=root RepID=Q5K9L8_CRYNE Length = 430 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 70/351 (19%), Positives = 127/351 (36%), Gaps = 50/351 (14%) Query: 17 PMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFI 75 + + KY+ + + + FW EE+D D ID+ + E E+ + Sbjct: 101 DILRESESRFVLF-PIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQERFFIL 159 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 L + D I G + + I E + + E +HS +Y+ +I V D Sbjct: 160 RILAFFAASDGIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQ 219 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +F + I+++A+ Y + + Sbjct: 220 EKDFLFRGMTNIPCIKQKADWALKYITDELP----------------------------- 250 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L++ +E I F SFA F +R LM G LI+RDE +H + N Sbjct: 251 -FRTRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLYNH 309 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 L+ E + + +A EK + ++IG+N ++CQY+E++ Sbjct: 310 LKHRCST-----------DEVHHIVSEALVIEKQFLTDALP-CALIGINAHLMCQYMEFV 357 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + +G + NP W+ L+S + E VS+Y + Sbjct: 358 ADRLVVDLGYPKIYNAT-NPFDWME--LISLQGKANFFESRVSAYQKANVS 405 >UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain 1 n=151 Tax=root RepID=RIR2_YEAST Length = 399 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 138/361 (38%), Gaps = 49/361 (13%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-L 66 + K + +EP+ + KY + ++ + FW EE+D+S+D D+ + Sbjct: 68 KLKEMEKEEPLLNEDKERTVLF-PIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRM 126 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 E+E+ L + D I + + IPE +++ E IHS +Y+ + Sbjct: 127 NENERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLL 186 Query: 127 IRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 I + DP +F+ I T +I ++AE + Sbjct: 187 IDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------------------ 222 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 + L++ ++E + F SFA F +R +M G LI RDE LH Sbjct: 223 -----DADALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHT 277 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 + L++ D + +A + E+ + +++G+N D Sbjct: 278 DFACLLFAHLKNKPDP-----------AIVEKIVTEAVEIEQRYFLDALP-VALLGMNAD 325 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 ++ QYVE++ + + A G ++ NP ++ +S + E VS Y + Sbjct: 326 LMNQYVEFVADRLLVAFGNKKYYKVE-NPFDFMEN--ISLAGKTNFFEKRVSDYQKAGVM 382 Query: 364 S 364 S Sbjct: 383 S 383 >UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclassified Phycodnaviridae RepID=C7U0I3_9PHYC Length = 389 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 140/365 (38%), Gaps = 50/365 (13%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 ++ EP+ + KY +L +K W EEVD+S+D D++ L E+E+ Sbjct: 70 EEEYEPILASTLNRFTVF-PLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQ 128 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 L + D I + N + I E ++ +E +H +Y+ +I + Sbjct: 129 KFIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYI 188 Query: 132 NDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 DP +F+ I T I+K+A+ ++D Sbjct: 189 KDPSEKKELFEAIQTVPCIEKKAQWAMKWFD----------------------------- 219 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 + L + +E I F SF F +R LM G LI+RDE LH Sbjct: 220 TKSRSFAERLFAFACVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHQEFAVE 279 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 + LR+ + + +A EK + ++IG+N + + +Y Sbjct: 280 LFKTLRNRPG-----------VDTIHAIVREAVDIEKGFILDALP-CNLIGMNSEKMSEY 327 Query: 309 VEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 +EY+++ ++ +G+ + + NP ++ +S + + E V Y G++D + D Sbjct: 328 IEYVSDRLLKQIGVPTIWNS-KNPFDFMEN--ISLDGKTNFFEKRVGDY--GKLDDDTDE 382 Query: 369 DDLSN 373 Sbjct: 383 IGFDE 387 >UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepID=D1BPH6_VEIPT Length = 342 Score = 272 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 91/375 (24%), Positives = 167/375 (44%), Gaps = 36/375 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M D+ + M G N+ +++ KYD ++ L+ FW PEE+ ++ D Sbjct: 1 MDKKLIFNENGDRGTQSMIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDV 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L ++E+ F + + LDSIQ + L I+ E+ + + AF E IH+ Sbjct: 61 KQFPYLTDYERRAFDKIIAFLNFLDSIQSENL-PNLSRYITASEVASLLNIQAFQEEIHA 119 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++I+ + N ++D+ T++ + +R I+ Y + S Sbjct: 120 QSYSYILDTVTNPITRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEA---------- 169 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 L +++ LE I FY F+ + A + M + I + I RD Sbjct: 170 --------------NLIHTIIANYILEGIYFYSGFSFFYTLARQGKMTATSTIFKYINRD 215 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E HL Q+++ LR D E + + D+ Q A+ E W Y+ D ++ Sbjct: 216 EVTHLVLFQNIIRELRRERPD----LFTPELEAKITDMIRQGAENEIAWGQYITDD-KIL 270 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSY 357 GLN ++ +Y++Y+ NIR++A+GL + + NP+ WI ++ ++ + E +V++Y Sbjct: 271 GLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNY 330 Query: 358 LVGQIDSEVDTDDLS 372 D DDL Sbjct: 331 TKAAA---FDFDDLE 342 >UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit beta n=80 Tax=Bacteria RepID=RIR2_TREPA Length = 351 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 78/367 (21%), Positives = 149/367 (40%), Gaps = 36/367 (9%) Query: 5 TFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F++ + + K M G N+ ++ KY K + ++ FW PEE+++S D DY Sbjct: 13 LFNEAGDIELHKRRMVGGNTTNLNDFNNMKYPWVSKWYRQAMNNFWIPEEINMSSDVQDY 72 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + L EK + L + LDSIQ + + I+ E+ + AF E +HS+SY Sbjct: 73 RNLSAIEKTAYDKILSFLIFLDSIQTANL-PNIGQYITANEINLCLTIQAFQEAVHSQSY 131 Query: 124 THIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 ++++ I + + +E + R + I + Y+E + S Sbjct: 132 SYMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFQDDKSVLA------------ 179 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 L ++ LE I FY F + M G+ + IR I RDE Sbjct: 180 ------------LLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENT 227 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL + + E + D+ + +QE W DY+ D + GLN Sbjct: 228 HL----WLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGD-QIPGLN 282 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 + ++ Y+ Y+ N+R + +G + ++ + W++ + ++ ++ E + ++Y Sbjct: 283 RHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYA 342 Query: 359 VGQIDSE 365 + Sbjct: 343 KSSAMVD 349 >UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Epsilonproteobacteria RepID=RIR2_HELPJ Length = 341 Score = 270 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 79/364 (21%), Positives = 161/364 (44%), Gaps = 31/364 (8%) Query: 3 YTTFSQTKNDQ-LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 ++ + + +F G P ++ ++ KY + L + L+ W EEV ++ D+ Sbjct: 6 KKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKR 65 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY L EK + L +DS+Q + + P I+ PE+ + A+ E +HS Sbjct: 66 DYLKLSAEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSH 125 Query: 122 SYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 +Y ++ +I + ++D + Q++ + + I+ Y EL + + Sbjct: 126 AYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPT--------------- 170 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 ++ + L + LE I FY F+ + A M G+A++IR I RDE Sbjct: 171 ---------EENILKALFANQILEGIYFYSGFSYFYTLARSGKMLGSAQMIRFIQRDEVT 221 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL + + + + + E ++F +A + E W DY+ + G ++GL Sbjct: 222 HL----ILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQ-GKILGLT 276 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ QY++++ + R+ VG+ + + +PI W+ ++ + + E VS+Y G Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGVQ-HPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335 Query: 362 IDSE 365 + + Sbjct: 336 VSFD 339 >UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NX45_COPC7 Length = 386 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 119/352 (33%), Gaps = 70/352 (19%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + Y +Y ++ + FW EE+D+S D +D+ L E+H Sbjct: 32 EEPLLKPSPKRLTLY-PIQYPEIWTHYKRAQASFWTAEEIDLSHDMMDWSKLTNAERHFL 90 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + +PE + E +HS +Y+ +I + DP Sbjct: 91 SRILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDP 150 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 +F I T IQ++AE ++ + Sbjct: 151 EERDFLFRAIETIPSIQRKAEWALTW-----------------------------TSDKS 181 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 L++ +E + F SFA F +R L+ G LI+RDE +H + Sbjct: 182 TTFAERLVAFAVVEGVFFSGSFAAIFWMRKRGLLPGLTFSNELISRDEGMHTDFACLLFA 241 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 LR + +A + EK++ + Sbjct: 242 YLRKRP-----------HSDTILAIVTEAVEIEKEF-----------------------F 267 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + ++G D + NP ++ L+S + E VS Y + Sbjct: 268 SADRLLTSLGNDKHYHVD-NPFDFME--LISMEGKANFFEKRVSDYAKANVS 316 >UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Firmicutes RepID=C9LBQ7_RUMHA Length = 359 Score = 268 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 79/369 (21%), Positives = 156/369 (42%), Gaps = 36/369 (9%) Query: 3 YTTFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 F+ + + D M G N+ ++ +Y + + ++ FW PEE+++S+DR Sbjct: 19 KPLFNPSGDTDVRFRRMIGGNTTNLNDFNNMRYGWVKGWYRQAMNNFWIPEEINLSQDRK 78 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY L E+ + L + LDSIQ + + I+ E+ + F E +HS+ Sbjct: 79 DYGELLGKERQAYDKILSFLVFLDSIQSANL-PCIGEYITANEINLCLSIQTFQECVHSQ 137 Query: 122 SYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 SY++++ I + + T+E++ KR I Y+E + Sbjct: 138 SYSYMLDTICSPEKRNEILYQWKTDERLLKRNTFIGELYNEFQMKKDSF----------- 186 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 L +M+ LE I FY F + + M G+A+ IR I RDE Sbjct: 187 -------------TLLKVMMANYILEGIYFYSGFMFFYNLSRNGKMPGSAQEIRYINRDE 233 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 HL + + + E +E Q ++ ++ +QE W Y+ D + G Sbjct: 234 NTHL----WLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGD-DIPG 288 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQT---RSNPIPWINTWLVSDNVQVAPQEVEVSS 356 ++K+++ +Y++Y+ N+R +G D+ + + W++ + ++ V+ E + ++ Sbjct: 289 ISKEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTA 348 Query: 357 YLVGQIDSE 365 Y + Sbjct: 349 YAKSTALLD 357 >UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit beta n=182 Tax=cellular organisms RepID=RIR2_CHLTR Length = 346 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 69/356 (19%), Positives = 149/356 (41%), Gaps = 25/356 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-- 65 Q + + + + V+V + KY + + W P E+ + +D +++ Sbjct: 10 QKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDR 69 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L E E+ + + NL + + +S+ G + +A+ ++ PE ++ AF E +H+ ++ + Sbjct: 70 LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLY 129 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 I ++ D +F+ I+ + + ++++ T Sbjct: 130 ICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDP----------------NFRTD 173 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 S+ L++ + + +E I FY F +F + M G + + I RDE +HL Sbjct: 174 SVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNF 233 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 ++N ++ + E +QE +L +A E ++A G ++GL + Sbjct: 234 GIDLINGIKEENPE----IWTPELQQEIVELIKRAVDLEIEYAQDCLPRG-ILGLRASMF 288 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 YV++I + R++ +GL + T NP PW++ + + + E V Y Sbjct: 289 IDYVQHIADRRLERIGLKPIYHT-KNPFPWMSETIDLNKEK-NFFETRVIEYQHAA 342 >UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit beta n=4 Tax=Campylobacterales RepID=C3XIX4_9HELI Length = 351 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 85/367 (23%), Positives = 166/367 (45%), Gaps = 31/367 (8%) Query: 3 YTTFSQ-TKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 ++ + + +F G P + ++ KY L+ + W PEEV++++D+ Sbjct: 15 KKIYNPHSTESVNERRIFGGNPTAIFELNKIKYQWAYNLLRTMFANTWFPEEVNMNQDKR 74 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY L EK + L +DS+Q + + P I+ PE+ + AF E++H++ Sbjct: 75 DYMELTLQEKQGYDRALAQLIFMDSLQTNNLTDNINPYITCPEINMLLVRQAFEESLHAQ 134 Query: 122 SYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 SY ++ +I + ++ +++++ + + I+ Y +L + + Sbjct: 135 SYAVMVDSISANTDEIYQMWRKDDKLRSKNDYIADVYTDLAKNPT--------------- 179 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + L + + LE I FY FA + A M+ +A++IR I RDE Sbjct: 180 ---------ETNLIKAMFANQILEGIYFYSGFAFFYTLARSGKMQNSAEMIRFIQRDEIT 230 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HLT + + + + E ++F QA E W +Y+ + G ++GL Sbjct: 231 HLT----IFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWGEYITQ-GQILGLT 285 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 I+ QY+EY+ + R++AV + + T+ NPI W++ + +N + E +V +Y G+ Sbjct: 286 AKIIRQYIEYLADKRLKAVDYPILYNTQ-NPIQWVDEQVNFNNQRTNFFEAKVRNYTRGE 344 Query: 362 IDSEVDT 368 + E D Sbjct: 345 LKFEDDF 351 >UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C8WWZ0_ALIAD Length = 369 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 77/367 (20%), Positives = 165/367 (44%), Gaps = 36/367 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + D K + G N+ + KY+ KL ++ FW PEE+ ++ D Y L Sbjct: 36 EGDRDWGKRRIIGGNTTNMIELNNIKYEWAYKLYRAMMNNFWIPEEIPLADDARQYDLLS 95 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + E+ + L + +DS+ + + I+ PE+ + AF E +HS+SY +++ Sbjct: 96 DDERRSYNKVLSFLIFMDSLLTHNL-PNINEYITAPEVNLCLTVHAFQEAVHSQSYGYVL 154 Query: 128 RNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 ++VN ++++ ++ + +R + I+ ++E IE + Sbjct: 155 DSVVNPATRDQIYNEWRNDDHLLRRNQFITDLFEEFIENPT------------------- 195 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + L +++ LE + FY F F + M G I+ I RDE HL Sbjct: 196 -----DRNLMKTIVANYILEGVYFYAGFGFFFVLGRQGKMLGTVSEIKFIQRDELTHLAI 250 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 +++ + + + + ++E ++ A Q E W Y+ + G ++GL ++ Sbjct: 251 FRNLYHEIIRENP----GIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQ-GKIVGLTDALI 305 Query: 306 CQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDS 364 Y++Y+ N+R+Q++ L + + + +P+PW++++ ++ + E V++Y Sbjct: 306 DAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA---G 362 Query: 365 EVDTDDL 371 ++ DDL Sbjct: 363 NLNWDDL 369 >UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=root RepID=C4L4U4_EXISA Length = 346 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 77/373 (20%), Positives = 154/373 (41%), Gaps = 35/373 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + K+ + G+ ++ ++ Y F + ++ LS FW P+E+ +S+D Sbjct: 3 IQKIKLLSPKHPNRATAIIGGETSSIVNWNDIAYPQFYTIYKQLLSNFWIPDEISMSKDM 62 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E E+ F + ++LDS+Q R + + + + A E +H+ Sbjct: 63 QQWPQLTEREQDAFKRIIGLLSILDSVQTRYILESSMFSSDSS-VHAVLAVIAQQEVVHN 121 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ ++V + + +F+ +E + KR + I Y+ E + Sbjct: 122 QSYSYVLSSLVPLAEQNRIFNIAKDDEMVMKRNQFILDLYEAFRETPNA----------- 170 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++ LE I FY FA + A + M G + +I I RD Sbjct: 171 -------------ENFAKSLVASVILEGINFYSGFAYFYNLARHQKMVGTSTMISYIQRD 217 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H +L + + + + Q YD +A E +W +Y+ RD + Sbjct: 218 EMQHSYFISQLLRAVLTENPK---IDENGQFSQFVYDTMAEAVDLEIEWCEYVLRD--LD 272 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQT-RSNPIPWINTWLVS--DNVQVAPQEVEVS 355 GL+ + YV+Y+ N R++ +GL+ ++ + +PWI + + + E + Sbjct: 273 GLDVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSDFFEQKSR 332 Query: 356 SYLVGQIDSEVDT 368 SY + D Sbjct: 333 SYAKVTDANGFDD 345 >UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=Shrimp white spot syndrome virus RepID=Q9INE3_WSSV Length = 413 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 67/368 (18%), Positives = 141/368 (38%), Gaps = 48/368 (13%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 +T + D K + P ++ ++ +K+++ FW EE+D RD D Sbjct: 44 FTKKLIMQVDTFKHLLTRENPNRFVS-RPIVHEDLWEMYKKEVACFWTLEEIDFERDPKD 102 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 ++ L + EK + L + D I + L + IPE ++ + E+IH Sbjct: 103 WEKLTQDEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNV 162 Query: 123 YTHIIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 Y +I +V D +F+ I+K+ + ++ + Sbjct: 163 YGELIDRLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQSNND---------------- 206 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 L +++ A+E I F +FA F R ++ G I+RDE Sbjct: 207 --------------LAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGLTSSNEFISRDE 252 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 LH +L ++ ++ +A + E+++ ++G Sbjct: 253 GLHRDFACMLLKKGFVDTPS----------RERILEIVTEAVRIEQEFLTVSLP-VKLVG 301 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +N ++ QY+E++ + + +GL+ + NP P+++ +S + E V+ Y Sbjct: 302 MNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN--ISLENKTNFFEKRVAEYQR 358 Query: 360 GQIDSEVD 367 Q+ + ++ Sbjct: 359 AQVMASIN 366 >UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67SN7_SYMTH Length = 346 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 90/372 (24%), Positives = 157/372 (42%), Gaps = 36/372 (9%) Query: 3 YTTFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 F++ D K + G P N+ KY+ +KL + L FW PEEV + D Sbjct: 8 KRLFNEHGERDWGKRRIIGGNPTNIMELTNVKYEWAQKLSDIMLRNFWIPEEVPLLDDAK 67 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 Y L E+ + L + +DSI S L+ ++ PE+ + F E +HS+ Sbjct: 68 QYLELTADEQWAYDRMLSFVIFMDSILTVS-MPNLINYVTAPEINMCLSIHNFHEALHSK 126 Query: 122 SYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 SY +++ ++V ++D + Q+ +R I++ + + + Sbjct: 127 SYGYVLESVVPAERRQYIYDLWREDRQLLERNRYIANTFQLFADNPT------------- 173 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 + M+ LE I FY FA +A A M+G A I+ I RDE Sbjct: 174 -----------DEHFVRACMAQYVLEGIYFYSGFAFFYALARMGKMKGTATEIQFINRDE 222 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 H+ Q++LN LR + + + QAA+ E WA Y + + G Sbjct: 223 ITHVAVFQNILNGLRQERPQ----LFTPQLDADLRAMIRQAAEHEMAWAAYCVGN-RIQG 277 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 L+ ++L YV+++ + R +A+G + + NPI W+ ++ + + E V++Y Sbjct: 278 LSGEVLQGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAK 337 Query: 360 GQIDSEVDTDDL 371 +D DDL Sbjct: 338 ST---NIDLDDL 346 >UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=root RepID=B7GK18_ANOFW Length = 345 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 76/372 (20%), Positives = 150/372 (40%), Gaps = 34/372 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + + + G+ + ++ KY F + + L FW P E+++S D Sbjct: 3 LTKVKLLEPSHPNKATSIINGKASGILNWNDIKYSHFYDIYKMLLGNFWTPFEINMSDDI 62 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + AL E E+ F+ + ++LDS+Q + A+ I+ P ++ E +H+ Sbjct: 63 KQWHALSERERDAFLHIIGLLSILDSVQP-NFIGAMKEYITDPSVKAIFSIIEQQEVVHN 121 Query: 121 RSYTHIIRNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ +I +++ F+ TN I KR E + Y+ E + Sbjct: 122 QSYSYVLASIEKLSEQHRAFEMARTNPHIYKRNEHVIRVYEAFREQPTV----------- 170 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++ LE I FY FA + A + M + +I I +D Sbjct: 171 -------------ETFCRALVASLVLEGINFYSGFAFFYNLARNQKMLKTSTMISYINKD 217 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H ++ + + YD +A + E +W+ ++ RD + Sbjct: 218 ELCHSYFISQLVRAVLWENP---QIDENGAFSAWIYDYIDEAIRYETEWSRFVLRD--ID 272 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL--VSDNVQVAPQEVEVSS 356 G++ + +Y+EY+ N R++ +GLD + N +PWI + + + E S Sbjct: 273 GIDVIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGKTDFFEARPRS 332 Query: 357 YLVGQIDSEVDT 368 Y + D Sbjct: 333 YTKTTDVNGFDE 344 >UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB3_9FIRM Length = 347 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 75/367 (20%), Positives = 154/367 (41%), Gaps = 36/367 (9%) Query: 5 TFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ + D + + G N+ ++ KY + ++ FW PEE+++ +D DY Sbjct: 9 LFNPEGDIDVTQRRLIGGNTTNMNDFNNLKYTWTADWYRQAMNNFWIPEEINLGQDVKDY 68 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + LP E+ + L + LDS+Q + + I+ E++ + +F E +HS+SY Sbjct: 69 RQLPAAERRAYDKILSFLVFLDSVQSANL-PNVSAYITANEVDLCLTIQSFQECVHSQSY 127 Query: 124 THIIRNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 ++++ I ++ + +E + R I Y+E + Sbjct: 128 SYMLDTIASPDERQEIIFQWKDDEHLLARNTFIGDLYNEFQQ------------------ 169 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + ++ L++ LE I FY F + M G+ + IR I RDE Sbjct: 170 ------EQSRENFLRVLIANYILEGIYFYSGFMFFYNLGRIGRMPGSVQEIRYINRDENT 223 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL +++L LR+ D E ++ ++ + +QE W Y + + GLN Sbjct: 224 HLWLFRNILRDLRAEEPD----LFTPEREEMMREMIREGVRQEIAWGKYAIGN-EVEGLN 278 Query: 302 KDILCQYVEYITNIRMQAVGLDLPF---QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 + ++ YV Y+ N R +++GL + + + + W++ + + ++ E ++Y Sbjct: 279 EKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYA 338 Query: 359 VGQIDSE 365 + Sbjct: 339 KSTALVD 345 >UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Proteobacteria RepID=B0TZS9_FRAP2 Length = 410 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 68/342 (19%), Positives = 130/342 (38%), Gaps = 37/342 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--ALPEHEKHIFISNLKYQTLLDS 86 Y Y L K W +E+D+S D D++ + + EK + L+ T D Sbjct: 100 YKPFSYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDV 159 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 G++ +PL E+ + ++A E IH R+Y + + P + + + Sbjct: 160 AVGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGL-PDSEYHAFLEYKA 218 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 + + + + + ++ L LCL E Sbjct: 219 MTDKIDFMMD-----------------------------ANPNTRRGLGLCLAKTVFNEG 249 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + SFA F M+G K++ RDE++H+ G + + + Sbjct: 250 VALFASFAMLLNFQRFGKMKGMGKVVEWSIRDESMHVEGNAALFRIYCQENP----YIVD 305 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + K+E Y + +A + E + D + G++ GL D + +Y+ +IT+ R+ +GL+ + Sbjct: 306 NQFKKEIYLMASKAVELEDKFIDLAYEIGTIEGLKADEVKEYIRHITDRRLNQLGLNEIY 365 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+ W+ L E V+ Y V + D Sbjct: 366 NIDKNPLTWLEWILN-GADHTNFFENRVTEYEVAGLTGNWDE 406 >UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Verrucomicrobia RepID=C0ACD0_9BACT Length = 362 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 127/360 (35%), Gaps = 27/360 (7%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA---LPEHEKH 72 + + G+ KY L + W PE++ + +D ++ + + E+ Sbjct: 26 KRVINGRETMTFNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERW 85 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 I + Y + + I G + L++ PEL+ + A E IH+ S ++I ++ Sbjct: 86 IIRMGIGYFSAAEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGI 145 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +P I ++ E + + + + Sbjct: 146 NPHECEAMFEDIPTIVRKNEFVVK-----------------NSRQLRRDLDLTQPENKQL 188 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + +E +FY F + + G ++ R RDE+ H+ +++L Sbjct: 189 LARNMFLFGQCMEGTQFYGLFGMILSLYRQNKFPGIGQMFRYTLRDESNHIEVFRNLLMD 248 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 L + K+E + +A EK++ + +GL D Y++YI Sbjct: 249 LVEENPE----IWTPGFKEELRETMREAVTLEKEFIRDCLP-VNAVGLAVDEFLTYIDYI 303 Query: 313 TNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + R++ VGL NP+PW+ + Q E V+ Y + D+L Sbjct: 304 ADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQ-NFFEGRVTEYQKASSLAVTHDDEL 362 >UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K6_THERP Length = 328 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 145/348 (41%), Gaps = 25/348 (7%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIF 74 + G P+ + +++ W PEEV + D D+ L + E+ Sbjct: 3 RRLLGGDPLAAVELFPLSHPWAYAHVQQAKHNTWFPEEVPLHDDVRDWHERLSDEERRAV 62 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + ++S+ + ++L ++ PE ++ A+ E H ++ ++I+ + D Sbjct: 63 EMFLGFFNPMESLVTTNLLLSLYRAVTAPEARLYLARQAWEEANHVMAFEYVIKTLPLDR 122 Query: 135 SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 VF V + + + ++ + + G ++ + Sbjct: 123 ERVFGLHVEHPAVAAKELFQRQLAEQWLVTPDVESVEGL-----------------QRLV 165 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 + LE I FY FA + AF +R L+ G I+ + +DE+LHL+ H++ + Sbjct: 166 RNLVGYFVILEGIFFYSGFALALAFRQRNLLRGLCTIVDWVLKDESLHLSFGIHLITTIL 225 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 + ++ ++ +L ++A + E+ + + + +IGL+ D+L +YV YI + Sbjct: 226 EEHPE----IMSAAFGRQLRELILRAVELEEAYNRAVLPE-PLIGLDADVLNRYVRYIAD 280 Query: 315 IRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 R++ +GL + F NP+ W+ + + V E Y VG+ Sbjct: 281 RRLEELGLPIAFG-EPNPLRWMVAQVDMPEI-VNFFEARNIHYEVGRA 326 >UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit beta n=13 Tax=Bacillales RepID=RIR2_BACHD Length = 345 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 77/371 (20%), Positives = 151/371 (40%), Gaps = 33/371 (8%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + T + G+ NV +D ++ L + L+ FW P E+++S D Sbjct: 4 LQKRKIYDTTASNASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDA 63 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E E+ F + LDS+Q ++ ++ L + +F E +H+ Sbjct: 64 KQFPTLTETEQEAFKKIIGLLAFLDSVQT-DYSMRAAEYLTDSSLAALMSVLSFQEVVHN 122 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ ++V +F+ ++ +++R E I Y++ ++ + Sbjct: 123 QSYSYVLSSLVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPT------------ 170 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 K ++ LE + FY FA + A + M + +I I RD Sbjct: 171 ------------PKTFLESIVYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRD 218 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E LH+ ++ L + EE K ++AA EKDW Y+ D + Sbjct: 219 EQLHVYLFTNIFKELLVEFPE----LNTEETKTFVKTTLMKAADLEKDWFRYIIGD-KIP 273 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSY 357 G+N + + Y+ +I N R +G++ P+ + NP+ WI + ++ + E + Y Sbjct: 274 GINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQY 333 Query: 358 LVGQIDSEVDT 368 D+ D Sbjct: 334 AKVSADNGFDE 344 >UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=A4XD08_SALTO Length = 350 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 141/359 (39%), Gaps = 28/359 (7%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E P +Y F ++ + W EEVD+ D D L E+H+ Sbjct: 17 ERHLLLDPGMDLTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAKLSSAERHLVS 76 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 + + D+I + + L ++ PE ++ F E +H + Y +++ V + Sbjct: 77 RLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEK 136 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 F + I ++AE + D + E+ + + + Sbjct: 137 ERFAAFAAVENIPSIARKAEFCFRWIDSIFELRE-----------------LRTQADRRA 179 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L + +E + FY +FA + R L+ G A + RDE++H+ +++ Sbjct: 180 FLLNLICFAACIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDT 239 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 +R+ D + +++ ++ +A E +A+ L G + GL+ + +Y++++ Sbjct: 240 VRAEEPD----LFDADLERQVKEMVAEAVDCEVQFAEDLLEQG-VSGLSLADMREYLQHV 294 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + R+ +G+ + + +NP ++ V E VS+Y +G S DD Sbjct: 295 ADRRLVTLGIAPMYGS-ANPFAFMELQDV--QELSNFFERRVSAYQMGVSGSVTFDDDF 350 >UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Halobacteriaceae RepID=B0R7R4_HALS3 Length = 331 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 134/341 (39%), Gaps = 28/341 (8%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY--QALPEHEKHIFISNLKYQTLLDSIQ 88 YD + ++ ++ W PEEV + D + L + E+ + NL + + +S+ Sbjct: 17 PIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAESLT 76 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + +A+ ++ PE ++ A+ E +H+ ++ + ++ DP ++ I Sbjct: 77 ANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGFDPEHMYGMYDRIPSIA 136 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 ++ E + + + + + + +E I Sbjct: 137 EKDEFVVGLTRAVDDQAFTIDTDDDLRDFLRDL----------------VGFYVIMEGIF 180 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 FY FA A R M G + I RDE+LHL ++N +R D A+ Sbjct: 181 FYAGFAMMLALKRRGKMVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVWTAD---- 236 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQT 328 + E L A E+ +A D ++G++ + YVEY+ + R Q + +D + T Sbjct: 237 FEAEVNSLMRDAVDLEQLYARDACPD-DLLGMSSEQFADYVEYVADRRFQQLRMDPVYGT 295 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 NP PW+ + + + E VS Y G +D D Sbjct: 296 D-NPFPWMTEQVDLN-TETNFFERNVSEYQQG---GSLDWD 331 >UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=Actinomycetales RepID=C7NLI2_KYTSD Length = 365 Score = 250 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 74/376 (19%), Positives = 142/376 (37%), Gaps = 30/376 (7%) Query: 1 MAYTTFSQTK-NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRD 59 M T ++ D +K+ P +Y F ++ + W EE+D+ D Sbjct: 15 MTSETHLESDLRDAVKQGSSLLDPGMSLTLRPMRYPQFYEMFRDAIKNTWTVEEIDLHSD 74 Query: 60 RIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 D L E+H+ + + D+I + + L I+ PE ++ F E + Sbjct: 75 LADLHNKLSPAERHLVSRLVAFFATGDTIVANNLVLNLYEHINSPEARLYLSRQLFEEAV 134 Query: 119 HSRSYTHIIRNIVNDPSVVFDDI---VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGT 175 H + Y ++ V D + F+ I+ +AE ++ D + Sbjct: 135 HVQFYLTLLDTYVPDEAERFEAFAAVENIPSIRTKAEFCFTWIDSI-------------- 180 Query: 176 HTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLI 235 + + ++ L + +E + FY +FA + R L+ G A + Sbjct: 181 ---ENLGQLETKEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWV 237 Query: 236 ARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG 295 RDE++H+ ++ +RS D E + + ++A E +A+ L G Sbjct: 238 FRDESMHMAFAFEVVETVRSEEPD----LFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMG 293 Query: 296 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 + GL+ + Y+E + + R +G+ + T NP+ ++ V E VS Sbjct: 294 -VAGLSVADMRAYLENVADRRAVQLGMPEIYGT-KNPLAFMELQDV--QELSNFFERRVS 349 Query: 356 SYLVGQIDSEVDTDDL 371 +Y VG S +D Sbjct: 350 AYQVGVEGSVSFDEDF 365 >UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Bacillales RepID=C6IYS7_9BACL Length = 343 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 72/373 (19%), Positives = 145/373 (38%), Gaps = 36/373 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M T T+ + G+ + ++ + KL + L W +E+ +++D Sbjct: 1 MQLQTIFNTEAPNKSTRIIGGECSGILNWNDIRMPHMYKLYKVLLLNHWIADEIPMAKDA 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E+ F N+ +LDS+Q + + LE E +H+ Sbjct: 61 QQFALLDPEEQRTFKINISLLAVLDSMQT-MFVGDVKRYFTDSSLEAISAIIGQQEVVHN 119 Query: 121 RSYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ +IV++ +F+ + + R + I++ Y + + Sbjct: 120 QSYSYVLSSIVSEQEQKEIFEYWKHDPVLLDRNKFIANIYQNFRDEPT------------ 167 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + + L++ LE I FY +FA + A + M G +++I I RD Sbjct: 168 ------------PQSFFEALVADLILEGIFFYSTFAFFYNLARDQKMMGTSQMISYIQRD 215 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H + L + +E Y +A + E +WA Y ++ Sbjct: 216 ENQHCYFFAEVFKQLLIDYPE----LNTKENIDYAYRTIDRAVELETNWAHYTLKNVP-- 269 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLV--SDNVQVAPQEVEVS 355 G++ + L Y++YI N R+ +GL+ + N +PWI + + + E + Sbjct: 270 GIDLNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSR 329 Query: 356 SYLVGQIDSEVDT 368 +Y D+ D Sbjct: 330 NYGKVGDDNGFDD 342 >UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Bacteria RepID=B0U5P0_XYLFM Length = 349 Score = 247 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 76/372 (20%), Positives = 144/372 (38%), Gaps = 35/372 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + +N + G+ + ++ Y F + ++ + FW P+EVD+ D+ Sbjct: 8 LDRIKILEPRNPNRSTGIINGKTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDK 67 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 Y L EK+ + + + LDS Q R + I+ P E IH+ Sbjct: 68 RQYGELSAREKNAYDAIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHN 126 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 SY++++ +I + + + VF+ T+ I KR I YD+ + + Sbjct: 127 ESYSYVLASITDLANQNRVFEIARTHPTILKRNAPIMQAYDDFMREKTA----------- 175 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L L+ + LE I FY FA + + M G KII I RD Sbjct: 176 -------------ETLLYSLIQSSILEGINFYSGFAYFYNLVRQNRMTGTGKIISFINRD 222 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H ++ + + + + F A + E W + + Sbjct: 223 ELAHTKFISEVIRAIVGENPELQTDA----LTDYVHQAFAHAIELETQWTGEVLN--GID 276 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVS-DNVQVAPQEVEVSS 356 G++ + + +YV+Y N +G++ + +T N +PWI + + + E+ +S Sbjct: 277 GIDVEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEMRNAS 336 Query: 357 YLVGQIDSEVDT 368 Y +D+ D Sbjct: 337 YKKTNVDNCFDD 348 >UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=B4D9U7_9BACT Length = 390 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 133/359 (37%), Gaps = 27/359 (7%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHI 73 + + G KY ++ ++ + W P+ +D++RD + L E+ I Sbjct: 55 KRVINGLRSAELNVLPLKYHEAYRIYKQMKANHWEPDVIDMTRDSQQWNTGALSPKERWI 114 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 + Y + + I G S + ++ EL+ E+IH S HII ++ D Sbjct: 115 IEMGVGYFSAAEGIVGDSVLHVIEDNLTAAELKHASLRHIAEESIHMDSLLHIIGSLNID 174 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 V +Q++ I+ + EL + ++ K+K Sbjct: 175 LDEVTAKFSDIPSVQRKNAFITRHMPEL------------------KMGIDLTQTANKQK 216 Query: 194 LYLCLMSVN-ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + + +E +FY FA + + M G ++ + RDE+ H+ +++L Sbjct: 217 FAKAIFGITQVMEGTQFYALFAMILSLHRQNKMTGIGQMFQYTLRDESNHIELGRYILTQ 276 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 L + D E + E + + + EK++ + + G+ + YVEY Sbjct: 277 LIAENPD----IWTPEFRAELVEFMREGVELEKEFVRDCLPEDGV-GMTQADFLTYVEYN 331 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + R+ + L ++NP W++ + + E V+ Y DDL Sbjct: 332 ADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEK-NFFETRVTEYQTSGSLKNTAEDDL 389 >UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=Proteobacteria RepID=Q2S729_HAHCH Length = 405 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 135/339 (39%), Gaps = 26/339 (7%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQT 82 ++ + KY + W P ++++S+D DY L EKH++ + L Y T Sbjct: 88 TDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKHVYENVLAYLT 147 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV 142 D + R+ +A++ +S PEL+ + + E++H+ +Y H I I D S +++ Sbjct: 148 TSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIETIGLDQSEIYNRYR 207 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 I ++ + + L+ + +L+ + + Sbjct: 208 VTPAIYRKIKMGNERISALLRPDIN----------------LRNRDDLETFVMAYIFFAG 251 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 E FY F+ FA R LM+G + ++ I RDE +H ++ + Sbjct: 252 IFEGCWFYNGFSPIFALQRRGLMKGTGEQLQYIMRDEVMHCAFGIRVVKQIIKE------ 305 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 E + L+ +A E +A +L ++ ++G + + +I N R + + L Sbjct: 306 -EGVTLDPKAIKTLWEEAEAAETGYAHFLLKE-PILGYTAEDHIEQFRFIANRRAKQLKL 363 Query: 323 DLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 D PF N +PW++ + E V+ Y G Sbjct: 364 DEPFPGAGNALPWLDEQASMRKEK-NFFETRVTEYQTGA 401 >UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI5_9CAUD Length = 367 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 161/369 (43%), Positives = 212/369 (57%), Gaps = 14/369 (3%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 ++ F + N+ FFG PV++ RYD + +K EK LS FWRPEEVD+++D+ Sbjct: 6 QFSVFDPSSNNTGLP--FFGDPVSIQRYDIVAWPFVQKWYEKGLSQFWRPEEVDITKDKA 63 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY L EK I+ SNLK QT+LDSIQG +P A P S PE++ V W E IHS Sbjct: 64 DYATLTPAEKRIYESNLKRQTMLDSIQGAAPFEAFGPWASTPEMQFAVLEWTRQEAIHSL 123 Query: 122 SYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 SYTHI+RN VNDP +VFD ++ +I A IS++YD+ + G Sbjct: 124 SYTHILRNTVNDPGIVFDHVLDVAEIVDCAHQISTHYDD--------MVRYSGMRMAGRA 175 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEA 240 + K+ + L + N LE IRFYVSFACS+AF + ++ MEGNAKIIR IARDE Sbjct: 176 FTREDIMNAKRAFWRALFAANTLEGIRFYVSFACSWAFTQFQKKMEGNAKIIRQIARDEQ 235 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 HL TQ +LN L DP+ I EE + E +F+ QEK WADYLF+DGSM+GL Sbjct: 236 DHLILTQTLLNRLPG--MDPDFEIIREELRGEMTQMFLDVGNQEKQWADYLFQDGSMLGL 293 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSN-PIPWINTWLVSDNVQVAPQEVEVSSYLV 359 N IL V+++ RM A+G P + R P+PWIN WL + +Q A QE E YL+ Sbjct: 294 NAKILHHMVDWLLTHRMGAIGHPYPGEPRKECPVPWINEWLNNKTMQYALQEAEAPDYLM 353 Query: 360 GQIDSEVDT 368 G + V Sbjct: 354 GVLTGSVSD 362 >UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain n=68 Tax=Alphaproteobacteria RepID=B3CU68_ORITI Length = 359 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 116/342 (33%), Gaps = 35/342 (10%) Query: 28 RYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDS 86 Y Y K Q W PEEV ++ D D++ L EKH+ ++ T D Sbjct: 24 IYKPFSYPWAYKAWHTQQKIHWLPEEVPLADDIKDWKYNLTPGEKHLLTQIFRFFTQADI 83 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 + E++ + ++ ETIH +Y+H++ I P + + + Sbjct: 84 EVNNCYMKHYARVFQPTEVQMMLSAFSNMETIHIAAYSHLLDTIG-MPETEYQAFMKYKA 142 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 ++ + + + + ++ ++ + E Sbjct: 143 MKDKYDYMQRF----------------------------NVDNKEEIATTLAVFGAFTEG 174 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 ++ + SFA F M+G +II RDE LH + + Sbjct: 175 VQLFASFAILLNFPRYNKMKGMGQIITWSVRDETLHTNSIITLFKTFIQEYPEV----WT 230 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 E+ K Y+ E + D F G + GL + +Y+ YI + R+ +GL + Sbjct: 231 EQLKSRIYEACCTIIHFEDAFIDLAFEVGGVEGLEARDVKKYIRYIADRRLLQLGLKENY 290 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+ W++ L E V+ Y D Sbjct: 291 LIEQNPLTWLDQILN-GVEHTNFFENRVTEYTRSATTGSWDE 331 >UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_SYNY3 Length = 355 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 168/373 (45%), Gaps = 44/373 (11%) Query: 5 TFSQTKNDQ-LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ T ND ++FG N+ + + +Y+ L ++ FW P+ +D+++D DY Sbjct: 17 IFNPTGNDSVENRTIWFGNTTNLMQLNDVRYNWAVGLYQQMRENFWIPQRLDITQDVTDY 76 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 L E++ F L Y T LDS+Q + L ++ PE+ + E +H++SY Sbjct: 77 WNLTNEERYAFDGILSYLTFLDSVQTCNI-PHLKSSVTAPEISLCMAEQISQEGMHNQSY 135 Query: 124 THIIRNIVNDP--SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 ++I I+ V++ T+ +++R E I+ Y + ++ + Sbjct: 136 QYMIETIIPTEKRDKVYEFWRTDRVLKERCEYIAMLYQKYVDHPT--------------- 180 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 ++ ++ LM+ LE + FY F + A R LM G+A I ++I RDE Sbjct: 181 ---------QENYFIALMADYLLEGLYFYNGFIYFYNLASRMLMPGSADIFKMINRDELS 231 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H+ Q ++ PE ++ + Y++F +A + E W +++ + +++G+ Sbjct: 232 HVRLYQKLI---------PEAMQVFTHSTDQIYEMFDKAVEFECRWTNHIVGN-NILGIT 281 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTR---SNPIPWINTWLVSDNV---QVAPQEVEVS 355 + QY +Y+ N R++A+GLD + +P + + + + E V+ Sbjct: 282 ESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEAHTKANFFEATVT 341 Query: 356 SYLVGQIDSEVDT 368 SY++ S D Sbjct: 342 SYVMSSGVSGWDE 354 >UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Bacteria RepID=C6D5U5_PAESJ Length = 318 Score = 240 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 72/349 (20%), Positives = 142/349 (40%), Gaps = 38/349 (10%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 +++ D ++ + FW EE+ +S D++D+ + + E+ ++ + L TLL Sbjct: 2 KAVNWNRPDDDFTLTFWQQNVMQFWTDEEIPLSDDKMDWMEMSDTERTVYKNVLGGLTLL 61 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFDDIV 142 D+IQG +L + + + + + E IH++SY+ I + + +F + Sbjct: 62 DTIQGGVGMPKILEHVDGLQRKAVLAFMSMMEQIHAKSYSSIFTTLASTEEIDAIFQWVE 121 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 TNEQ+QK+A +SS+Y + E K++LY + + Sbjct: 122 TNEQLQKKATLVSSWYQGI---------------------------ETKQQLYKAMAASV 154 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 LE+ FY F A + M + +II LI RDE++H + L + E Sbjct: 155 FLESYLFYSGFFYPLYLAGQGKMTSSGEIIDLILRDESIHGLYVGVLAQELFNQFTPEEQ 214 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + K+E + L + E + D L+ + ++ + YV Y N + +G Sbjct: 215 ----AQLKEEVFALLNTLYENEVVYTDNLYSPIGL----QEDVKAYVRYNANKALMNLGF 266 Query: 323 DLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + F P + + + Q + + Y+ ++ +D Sbjct: 267 EPYFPEEP-VNPIVFNGISTHTKQHDFFSKKGNGYVRTVHIEQLRDEDF 314 >UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 Length = 419 Score = 240 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 135/348 (38%), Gaps = 50/348 (14%) Query: 21 GQPVNVARYD---QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 ++ + +Y +L +KQ + FW EE+D+S D D++ EKH Sbjct: 101 EDFDRFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLV 160 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV- 136 L + LD I + + I IP++ +E +H SY+ +I+ D Sbjct: 161 LAFFASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQ 220 Query: 137 --VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 V I T I+K+A + + L Sbjct: 221 RHVMRSIQTMPIIEKKALWAEKWMN-----------------------------PETASL 251 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 L+ LE ++F SF + +R+ +G + LIARDE LH T + + L+ Sbjct: 252 AERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIARDEGLHATASVLIYKHLK 311 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 + ++ +++F A E ++ ++IG+++ + +Y++++ + Sbjct: 312 NRLP-----------RERVHEIFKHAVSVECEFISSALP-VALIGISEKSMTEYIKFVAD 359 Query: 315 IRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + +G D + +NP W++ ++S + E V+ Y + Sbjct: 360 YWLNQLGYDKVYNC-ANPFEWMD--MISLQGKTNFFENRVAEYSKPGV 404 >UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subunit n=9 Tax=Bacteria RepID=B0RGP8_CLAMS Length = 331 Score = 240 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 66/345 (19%), Positives = 134/345 (38%), Gaps = 23/345 (6%) Query: 17 PMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFIS 76 + Y L ++ ++ W P E+ + D D++ + + E+H Sbjct: 3 KILGTGIQEGLLLKPVNYQWAMDLYDQAVANTWFPNEIQLGEDIADFKKMTDEERHAITF 62 Query: 77 NLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 + Y + + ++ + P I+ PE ++ + E H S+ +++ D Sbjct: 63 LMSYFNPNELLVNKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETFPIDREA 122 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 ++ V + ++ E + + E T + K + Sbjct: 123 AYNSHVDIPSMARKEEFEVKFIKRMTEQTLDI----------------TTTEGKKDFVRN 166 Query: 197 CLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 + LE I FY F S +F +R L+ ++ I RDE+LHL +++ + Sbjct: 167 LVAYNVILEGIWFYSGFMVSLSFRQRNLLRNFGSLMDWIVRDESLHLKFGINLILTVLEE 226 Query: 257 ADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIR 316 D + EE E + + A + E+ + L +G ++GLN + + QYV+Y+ + R Sbjct: 227 NPDLQT----EEFAAEIKQMILDAVEMEEQYNRDLLPNG-ILGLNANYINQYVKYLADRR 281 Query: 317 MQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ +G + ++ SNP W+ T V E +SY Sbjct: 282 LEELGFEAEYKV-SNPAKWMAT-ANDTLQLVNFFESTNTSYESNA 324 >UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C3B1_9GAMM Length = 374 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 66/366 (18%), Positives = 137/366 (37%), Gaps = 28/366 (7%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + + + G+ +V + KY + FW P E+ + D+ Sbjct: 27 LDAISIGTKRPSSSDIKIIGGRGYDVRQPIPVKYTSVRERFLNARKNFWIPNEIPMGEDK 86 Query: 61 IDYQA--LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 + + L E E +F SN+ Y T D++ + + A+L I+ E+ + E+ Sbjct: 87 LQWNTGLLTEAEMWLFKSNISYLTASDNLVPDNLDNAILKHITANEMRQYFRHQIMEESN 146 Query: 119 HSRSYTHIIRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGT 175 H SY I+ + D +F+ + ++ ++ + Sbjct: 147 HIESYLFILESFGLDEKGQGQIFNLYQEVPALTEKLNWNLTFTN---------------- 190 Query: 176 HTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLI 235 V E + L L+S E + F + F+ FA A + + A+ I Sbjct: 191 -NVVNSEAPRGTLEANRALLEDLISYYIFEYLFFPLGFSQIFALARKGKLRNTAQQYSYI 249 Query: 236 ARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG 295 RDE LH + ++ + ++ + +A + E D+A +G Sbjct: 250 WRDENLHSSNGLWLIKQIIQEN----HELWDSTMQERSRAIVSEAVKLETDYAHASMPEG 305 Query: 296 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 ++GL ++ ++ + + +G+ F+ R +P+PWI+ + ++ +V E V Sbjct: 306 GIVGLPVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEYELNH--EVNFFEGRVR 363 Query: 356 SYLVGQ 361 Y G Sbjct: 364 EYQTGS 369 >UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain n=8 Tax=Fungi/Metazoa group RepID=B7XP84_ENTBH Length = 336 Score = 238 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 113/325 (34%), Gaps = 48/325 (14%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHI 73 EP+ + +Y + + S FW EEVD++ D + L +E+ Sbjct: 24 GYEPLLDEAKKRYVIF-PIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFF 82 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 L + D I + + I E + + E IHS Y+ +I ++ D Sbjct: 83 IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142 Query: 134 PSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 +F+ I I+K+A + Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIAS------------------------------ 172 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 ++ +E I F SFA F +R LM G LI+RDE LH + Sbjct: 173 DTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLH 232 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + + D+ +A E+++ S+IG+N ++CQY+E Sbjct: 233 KYINNKCT-------------VIEDIVREAVAIEQEFLSESLP-VSLIGMNCKLMCQYIE 278 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPW 335 ++ + + A+G + ++ I W Sbjct: 279 FVADRLLFALGERKIYTFLTHSISW 303 >UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase small subunit 048L n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR2_IIV3 Length = 376 Score = 237 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 118/341 (34%), Gaps = 18/341 (5%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 + +Y + W +E+++ D D+ L E EK + L++ T D Sbjct: 53 FKPFEYPGCYDKWDTHEHAHWSFKELNMQDDVHDWHNRLSEAEKTFLVQILRFFTQGDVD 112 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 L L PE+ + ++ E +H SY+H+I + P V + + + + + Sbjct: 113 VAVGYV-QYLQLFQQPEVRMMLFSFGAREAMHIASYSHLISTLNL-PDVTYQEFLKYKAM 170 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + E + + L++ + +E + Sbjct: 171 KDKHEFV-----------FNSRFKSTTVGRFFNYLLFGYDTHLEEIAVKIALFSAFIEGV 219 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + SF F LM+ +II+ DE H + + L Sbjct: 220 QLFSSFIMLLNFTRHGLMKKMGQIIQWSIADETHHTNSMMELFSTLVVENKS---HIRLG 276 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 + D + Q E + D F G M L D + Y+ YITN R+Q +G + Sbjct: 277 VLEARVRDTARKIVQLEDGFIDLAFSMGEMRQLTADDVKSYIRYITNRRLQTMGYLPLYS 336 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+PW+ L + + E + + Y + + Sbjct: 337 VVENPLPWVEDLLNAPS-HTNFFENKPTEYAKASLTGDWPW 376 >UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=Alphabaculovirus RepID=A0EZ20_9ABAC Length = 341 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 126/348 (36%), Gaps = 23/348 (6%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQG 89 + ++ + + W+ EE D+SRD D+ L E+ L + D+I Sbjct: 13 PIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASADTIVN 72 Query: 90 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQ 146 + + + E + + E +HS Y+ ++ + + + + + Sbjct: 73 INLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAFDRIDC 132 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 I+K+A+ + + W + + KL +++ +E Sbjct: 133 IKKKAQWALKWTES------KWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFAIVEG 186 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 I F SFA F + LM G LI+RDE LH N + Sbjct: 187 IFFSGSFAAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYYNNYIPINE-------- 238 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + Q+ +F++A EK++ ++G+N +C+Y+E++ + + + F Sbjct: 239 KLSPQQILSMFIEAVDIEKEFFTTALP-CYLLGINATEMCKYIEFVADRLLVELRQPKHF 297 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNF 374 T NP ++ +S + E V Y +V + L F Sbjct: 298 NT-PNPFNFMTN--ISLEGKTNFFERRVGEYKRFGAGQDV-YEILEEF 341 >UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain n=7 Tax=African swine fever virus RepID=RIR2_ASFB7 Length = 334 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 132/361 (36%), Gaps = 46/361 (12%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E + + ++ +K S W +EVD+ +D D++A+P+ ++ + Sbjct: 9 EELLIENSQRFTIF-PIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYK 67 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 L + + D I + + I + E+ + A E +HS +Y+ ++ ++ D Sbjct: 68 QILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEK 127 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +F I + I+K A+ + + D + Sbjct: 128 EQQRIFSGIEKHPIIKKMAQWVRQWMD-----------------------------PDRN 158 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L L+ A+E I F F E+ +M G I+RDE +H + +++ Sbjct: 159 TLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNEFISRDEGVHCSFACFLISN 218 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFR--DGSMIGLNKDILCQYVE 310 + + + + +A + ++ +Y F G + G +K++L QY+ Sbjct: 219 YVYNIPEE----------KIIHKILKEAVELVDEFINYAFDKARGRVPGFSKEMLFQYIR 268 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 Y T+ + ++ NP P + + +++ + E+ + Y D Sbjct: 269 YFTDNLCFMMQCKSIYKV-GNPFPQMTKFFLNEVEKTNFFELRPTQYQNCVKDDAFAFKL 327 Query: 371 L 371 Sbjct: 328 F 328 >UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subunit n=7 Tax=Ranavirus RepID=Q8QYZ8_RTRV Length = 387 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 122/349 (34%), Gaps = 40/349 (11%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDS 86 + +Y E + K W E+++ D D+++ + EK L+ T LD Sbjct: 73 FKPFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEKAFVSCVLRLFTQLDV 132 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 G L + E+ + ++A E IH ++Y+ + + P + + Sbjct: 133 EVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLG-MPDCEYQAFADYVE 191 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 + + + + L L+ E Sbjct: 192 MTDKLDFMREM-----------------------------DCSTLPGLARSLLRAVLNEG 222 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + +F F M+G K++ RDE +H+ G + L S +I Sbjct: 223 VSLFAAFVMLLTFQRSGKMKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDII 282 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRD-GSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 E K++ + A+ E+ + D F++ G + L + YV Y+ N+R +GL Sbjct: 283 ELFKED----AERVAELEEAFVDLAFQECGPVCELEPKQVKDYVLYVINLRAANMGLPKL 338 Query: 326 FQ--TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + + PIPW+ WL+ E V+ Y G + + L Sbjct: 339 IERAPEACPIPWV-KWLIDGADLTNFFENHVTEYETGGLTGSWSYEPLD 386 >UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Propionibacterineae RepID=D1YE85_PROAC Length = 328 Score = 234 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 128/344 (37%), Gaps = 23/344 (6%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 + Y L + ++ W P E+ + D D+ + E H Sbjct: 2 ILGSGIQEGLLLKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHL 61 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV 137 + Y + + ++ + P ++ E ++ + E H ++ +++ D Sbjct: 62 MSYFNPNELLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEA 121 Query: 138 FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 + + + ++ ++ + E T ++ + + Sbjct: 122 YRSHIHVPSMARKEAFEVAFIKRMTEQTLDI----------------TTVEGKQDFVRNL 165 Query: 198 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 + LE I FY F + +F +R L+ +I + RDE+LHL +++ + Sbjct: 166 IAYNIILEGIWFYSGFMVALSFRQRNLLRNFGSLIDWVVRDESLHLKFGMNLILTVLEEN 225 Query: 258 DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRM 317 + +E E +D+ VQ + E+ + + G ++G+N D + YV+Y+ + R+ Sbjct: 226 PE----IATDEFAAEIHDMIVQGVEMEEQYNRDMLPRG-ILGMNADYVNDYVKYLADRRL 280 Query: 318 QAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 + +G + ++ NP W+ T V E +SY V Sbjct: 281 EELGFEPEYRV-VNPAKWMAT-ANDTLQVVNFFEATNTSYEVNA 322 >UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 Tax=root RepID=Q7Y4S0_BPR69 Length = 390 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 179/387 (46%), Positives = 242/387 (62%), Gaps = 15/387 (3%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 T F+ + D L EPMFFG + +ARYD Q++ +FE+LIE LSFFWRPEEV++ D Sbjct: 2 STVFNTQQVDVLNEPMFFGSGLGLARYDIQRHKVFEELIE-ILSFFWRPEEVNLMLDSAQ 60 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 + LP+ ++ I +NLKYQ+LLDSIQGR+P+ L+ LIS P L+TWV TW FSETIHSRS Sbjct: 61 FNKLPQFQQDICTNNLKYQSLLDSIQGRAPSAVLMALISDPSLDTWVATWTFSETIHSRS 120 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 YTHI+RN+ DPS VFD+IV +E I KRAE I YYD+++ T W E G Sbjct: 121 YTHIMRNLYTDPSKVFDEIVLDEAIMKRAESIGKYYDDVLVKTRNWENAKEVYECSIGSC 180 Query: 183 VTVS-----------LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER-ELMEGNAK 230 R+L K LYLCL +NALEAIRFYVSFAC+F F + E+MEGNAK Sbjct: 181 QQNDIEMYEEIMFNAKRDLMKSLYLCLHVINALEAIRFYVSFACTFNFHKNMEIMEGNAK 240 Query: 231 IIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADY 290 I++ IARDE LHL + ++ + ++ + + K+WA + Sbjct: 241 IMKFIARDEQLHLRVLSTLSVNFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKYKEWAAH 300 Query: 291 LFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ--TRSNPIPWINTWLVSDNVQVA 348 LF+DG+ G+N +C +V+Y+T RM+ GL P +P PWI +L SD VQ A Sbjct: 301 LFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLNSDLVQAA 360 Query: 349 PQEVEVSSYLVGQIDSEVDTDDLSNFQ 375 PQEVE+SSYLV QID++VD + +++++ Sbjct: 361 PQEVEISSYLVAQIDNDVDQNVINSYK 387 >UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=cellular organisms RepID=Q2RUE9_RHORT Length = 358 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 122/355 (34%), Gaps = 48/355 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY--QALPEHEKHIFISNLKYQTLLDS 86 Y+ ++Y + +KQ W EEV + D D+ + + E+++ ++ T D Sbjct: 26 YNVERYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWASDRVSDQERNLLTQIFRFFTQSDV 85 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 + +P+ E++ + + ETIH +Y ++ + P F Sbjct: 86 EVSDNYLKRYMPIFQPLEIQMMMAAFTNMETIHIDAYALLLTTLG-MPRTEFSAFRDYAA 144 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 ++ +A+ + ++ + S M E Sbjct: 145 MRDKADYMHTFGVGTMADVSRT----------------------------LAMFGAFTEG 176 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + SFA F M+G +I+ RDE+LH G + + + Sbjct: 177 MALFASFAMLLNFPRHNKMKGMGQIVTWSVRDESLHCQGIIRLFHEWNRE-----TGALT 231 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + + D+ E+ + D F G++ G+ + + YV Y+ + R+ + L + + Sbjct: 232 KPVRDDILDVATTMVGLEEKFVDLAFELGAIEGMRAEDIKSYVRYVADWRLTQLKLPILY 291 Query: 327 Q-----------TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 R +P+PW+ L E + Y D D Sbjct: 292 GHFRETEAGYEQLRPHPLPWLVEILN-GVEHANFFEQRSTEYSKAATQGAWDGPD 345 >UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Bacteria RepID=C9XQ14_CLODC Length = 323 Score = 228 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 145/350 (41%), Gaps = 38/350 (10%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TL Sbjct: 9 HNAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTL 68 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND--PSVVFDDI 141 LD+ QG + +++ L + + + E IH++SY+ I ++++ +F+ I Sbjct: 69 LDTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWI 128 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 T +Q++A+ + + Y+ ++ LYL +++ Sbjct: 129 ETEPTLQRKADLVLAQYE---------------------------NTTNQEGLYLSMVTS 161 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F + + M + +II LI RDE+LH + + D + Sbjct: 162 VFLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLAQEIYDSFDKMD 221 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 + +++ Y + + E ++ + ++R+ + + +++Y N ++ +G Sbjct: 222 ----KKMLEEKMYSILYSLMENEIEYTNVIYRESGLE----KEVVNFLKYNANRALENLG 273 Query: 322 LDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + + + P + L ++ + + Y G + D D + Sbjct: 274 FEKLYTVDA-INPIVLNGLSTETKTHDFFSTKGNGYQKGVYEELEDEDFI 322 >UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subunit n=4 Tax=Myoviridae RepID=A2PYM8_9CAUD Length = 348 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 151/373 (40%), Gaps = 44/373 (11%) Query: 5 TFSQTKNDQ-LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ + +D K +F G P N+ KY L + + W P+ D++ D +Y Sbjct: 8 IFNPSGDDSPQKRRLFGGNPTNIINLKDVKYKWASHLFTEMRANIWIPQATDLTPDINNY 67 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 +P + + F L Y T LDS+Q R L+P+I+ PE+ + E +HS+SY Sbjct: 68 VTMPPNMRRAFDGMLSYLTFLDSLQTRVL-PLLMPVITAPEVSICMGEQLSQEQVHSQSY 126 Query: 124 THIIRNIVND--PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 +II ++ +++ + + KR E I + YD I + Sbjct: 127 AYIIETVIPTDKRDYIYELWREDPVLLKRCEYIQNLYDRYIHEMT--------------- 171 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + + ++S LE I F+ F +A A M A II+LI RDE Sbjct: 172 ---------MENYTISMVSDFLLEGIYFFPGFRLFYAIANERYMSATADIIKLIERDEQT 222 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL +++ + E DLF +AA+ E +W ++ + G+N Sbjct: 223 HLKLISNIIRTGLAEGTLMWD-------TDEIIDLFRKAAEYEIEWGLHI--GLGVNGIN 273 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRS---NPIPWINTWLVSDNV----QVAPQEVEV 354 + QY +Y+ NIR +A+GL F+ R NP + + + + E V Sbjct: 274 ATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGEDSITRDNFFESGV 333 Query: 355 SSYLVGQIDSEVD 367 ++ D Sbjct: 334 IYRNPAKVVDGWD 346 >UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD Length = 352 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 74/370 (20%), Positives = 150/370 (40%), Gaps = 36/370 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + + + G+ + ++ + +I+ + + + FWRP E+ + D Sbjct: 12 LKRPRLLEPSHPNRGTKIVGGECSGLLNWND-EDEIWYDISQTLEANFWRPVEIKMKEDE 70 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + +L E+ F+ LDS+Q ++ ++ + L A E H+ Sbjct: 71 KMWDSLTPIEQDTFLRVGTALACLDSLQVKAILE-VIRFTTNSALANISAFIAQQEATHT 129 Query: 121 RSYTHIIRNIVNDP--SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 SY++I ++V P + F++ + + + KR + + Y++ E S Sbjct: 130 TSYSYITSSLVRLPVQNQYFNETMKHPVLAKRNKLVLDVYEDFAENPS------------ 177 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L+ L+ LE I FY FA + A ++ M ++ +I I RD Sbjct: 178 ------------LQNLFRMLVQSINLEGIYFYSGFAFFYWLASQQKMMKSSTMISYIQRD 225 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H ++ L + + +E Q D +A EK+WA + D + Sbjct: 226 EMQHAYFIGLLIRRLLTENPE----LNTQENAQYIVDSLKEAVATEKEWAGEILAD--IE 279 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLV--SDNVQVAPQEVEVSS 356 GL+ + Y+EY+ N R++ +G+D ++ R NP+PWI + ++ + E + Sbjct: 280 GLDLEEFDHYIEYLANKRVRQLGMDNIYEERGNPMPWIQVFSDEMMEHTKTDQFENKSRD 339 Query: 357 YLVGQIDSEV 366 Y + Sbjct: 340 YSGATKKNNF 349 >UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta subunit n=2 Tax=Granulicatella RepID=C8NFG6_9LACT Length = 346 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 72/371 (19%), Positives = 135/371 (36%), Gaps = 45/371 (12%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 F++ + +P+ + ++Q + I + EK FW + VS D Sbjct: 13 TKRYFNEILSQNSTQPV---EYYKAIDWNQVEDMIDKLTWEKLTEQFWLDTRIPVSNDLD 69 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 D++ L EK + TLLD++Q + + E F E++H++ Sbjct: 70 DWRTLSPAEKDVVGKVFGGLTLLDTLQSEEGASLMKDYVRTQHEEAVWNNIQFMESVHAK 129 Query: 122 SYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 SY+ I + + +F+ NE +Q +A+ I+ Y Sbjct: 130 SYSTIFSTLHTKAEIEDIFEWTNNNEYLQFKAKKINEIYQS------------------- 170 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 K ++ LE FY F + + A+II+LI RDE Sbjct: 171 ------------KDALKMKVASTMLETFLFYSGFFTPLYYLGNNKLANVAEIIKLIIRDE 218 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 ++H T T + + + E EE K Y+L ++ Q E + ++ Sbjct: 219 SVHGTYTGYKFQQGYNELSEQEQ----EEMKMWVYNLCLELYQNEVKYTQSIYDQVGWT- 273 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 + + ++ Y N +Q +G D F T + P + + + + YL Sbjct: 274 ---EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFFSQVGNGYL 330 Query: 359 VGQIDSEVDTD 369 +G +++ D D Sbjct: 331 LGSVEAMDDED 341 >UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR2_MIMIV Length = 417 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 140/378 (37%), Gaps = 52/378 (13%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 + +KEP+ + + KY + Q+ +W EEVD+++D D Sbjct: 86 KHAIDFENDVIMKEPILSLKSEQYTVH-PIKYQKVWDNYKDQMKNYWTVEEVDLAKDVND 144 Query: 63 YQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 + L + +++ + L + D I + L+ ++ I E E E H Sbjct: 145 WNNHLSDDDRNFIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGE 204 Query: 122 SYTHIIRNIVND---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 Y+ ++ V D + + + I T I+K+A+ + + Sbjct: 205 MYSLMLTTFVKDDALRNKLINSIKTMPSIKKKADWCNKWIKS------------------ 246 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAEREL--MEGNAKIIRLIA 236 K L++ + +E + F SFA F RE+ M G + IA Sbjct: 247 ------------DKTYAHKLVAFSIVEGVFFSGSFASIFWLKTREMHVMPGLIISNQFIA 294 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 RDE H+ M +LL + + + +I +E + + + Sbjct: 295 RDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFINDSL------------PCK 342 Query: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 ++G+N +++ QY++Y+ + + +G F NP ++ V V+ E + Sbjct: 343 LLGMNSELMSQYIKYVADRLLVDLGYRKKFNVD-NPFEYMKKIDVF--VKANFFEKRNDA 399 Query: 357 YLVGQIDSEVDTDDLSNF 374 Y ID+E L NF Sbjct: 400 YSNANIDNEKKIVFLENF 417 >UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase small subunit 376L n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR2_IIV6 Length = 360 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 122/361 (33%), Gaps = 37/361 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 Y Y F +K W P EV + D D++ L ++++ + ++ T D Sbjct: 10 YKPFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVD 69 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + LP +PE+ + +A E +H +Y++++ + P + + + E++ Sbjct: 70 VASAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLETLG-MPEATYKEFLMYEEM 128 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + + I + D H + ++ + + + E + Sbjct: 129 KDKQDYIKKFSDS--------------RHILGKGEENLTTEDKEHIAAGIALFSGFTEGM 174 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + +FA F M+G +I+ DE H G + + + Sbjct: 175 QLFSTFAMLLIFPLNGFMKGMGQIVTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPS 234 Query: 268 ECKQECYDLFVQAAQQEKDWADYLF-----------------RDGSMIGLNKDILCQYVE 310 ++ Y + + E+ + D +F + GL L Y++ Sbjct: 235 VLQETVYKIAKEMVGLEEAFIDLVFKKYKDEPINDDNDLETKDNKDFFGLTPQRLKAYIK 294 Query: 311 YITNIRMQAVGLDLPFQTRS---NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 YI + R+ +G F NP+P + +++ E + Y Sbjct: 295 YIADRRLNLMGYKSIFNLEPYPTNPLPELE-IMINAPTHTNFFENRSTDYANVSTKGTWS 353 Query: 368 T 368 Sbjct: 354 E 354 >UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase beta chain n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QU02_9CAUD Length = 365 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 103/372 (27%), Positives = 181/372 (48%), Gaps = 18/372 (4%) Query: 1 MAYTTFSQTKNDQL--KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSR 58 M+ T F+ + L P+F GQP+ + + Y L ++Q + W +EV++ Sbjct: 1 MSSTVFNHKNDAYLTASYPLFMGQPLAMYDSMNKIYPELFDLYKQQKAQDWSEDEVNLEN 60 Query: 59 DRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 RID+Q + E + I NL +Q DS R+ L P IS E V E + Sbjct: 61 SRIDFQTAAKSEIEVCIENLLWQWEADSRVSRNIITLLAPFISNNEFAAMVTKQTEIENL 120 Query: 119 HSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 H+ +Y+ I+R ++DP+ + ++ N+ + R+ I EL + + L E Sbjct: 121 HALTYSEIVRQCISDPTEMIKRVMDNQAVLDRSSTIDDVMAELEILGAKKRLGYE----- 175 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + +++ L ++S+ ALE + F SFAC+FA A+R L G A++++ I D Sbjct: 176 ------LDDEHIRQTLIKFMVSILALEGLEFIASFACTFALAQRGLFMGVAQLVQKIMLD 229 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SM 297 E LH L++L DP + + CK + + + + E +WADY+F +G S+ Sbjct: 230 EILHSKMDFAALDIL---LKDPVWFQSYQNCKGDVQRILDEVMENESNWADYIFSEGRSV 286 Query: 298 IGLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 +GLN +L ++V Y + LD + NP+P+++ W+ D+ Q A QE + S Sbjct: 287 VGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNIDSQQNANQEQDNSQ 346 Query: 357 YLVGQIDSEVDT 368 YL+ + ++ + Sbjct: 347 YLLNTMVNDDED 358 >UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit beta n=111 Tax=root RepID=RIR2_BACSU Length = 329 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 143/350 (40%), Gaps = 37/350 (10%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 + A + + + D + + + FW PEE+ ++ D + ++ L ++E+ ++ L TL Sbjct: 5 YDAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTL 64 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSET-IHSRSYTHIIRNIVNDP--SVVFDD 140 LD+ QG + + + + + + A E +H++SY++I + + VF+ Sbjct: 65 LDTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEW 124 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 + N+ +QK+A+ I Y + ++ + L+ +++ Sbjct: 125 VKQNKYLQKKAQMIVGLYKAI-------------------------QKDDEISLFKAMVA 159 Query: 201 VNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 LE+ FY F F + + + +II LI RDEA+H + + + + Sbjct: 160 SVYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEE 219 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 + E ++ DL Q + E ++ + L+ + + +++ Y N + + Sbjct: 220 K----KAELREFAIDLLNQLYENELEYTEDLYDQVGL----SHDVKKFIRYNANKALMNL 271 Query: 321 GLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 G D F+ + P + L + ++ + Y ++ D D Sbjct: 272 GFDPYFE-EEDINPIVLNGLNTKTKSHDFFSMKGNGYKKATVEPLKDDDF 320 >UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain 2 n=7 Tax=Saccharomycetaceae RepID=RIR4_YEAST Length = 345 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 124/359 (34%), Gaps = 47/359 (13%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 K + E + + KY +K + FW EE+++++D D+Q L Sbjct: 17 DMKEAEKDEILLMENSRRFVMF-PIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLT 75 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + +K + L D++ + + PE +++ E I+S Y+ ++ Sbjct: 76 DDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMV 135 Query: 128 RNIVNDPSVV--FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 DP + F +I +++ +A I + Sbjct: 136 DAFFKDPKNIPLFKEIANLPEVKHKAAFIERWIS-------------------------- 169 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 L++ A E I ++A F ++++M G A R I RD + Sbjct: 170 ---NDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDF 226 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 + + LR+ + + +A + EK++ G++ + Sbjct: 227 SCLLFAHLRTKPNPK-----------IIEKIITEAVEIEKEYYSNSLP-VEKFGMDLKSI 274 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDS 364 Y+E++ + +Q G + + NP ++ V+ + E +VS Y S Sbjct: 275 HTYIEFVADGLLQGFGNEKYYNA-VNPFEFME--DVATAGKTTFFEKKVSDYQKASDMS 330 >UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E3 Length = 309 Score = 217 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 69/334 (20%), Positives = 139/334 (41%), Gaps = 34/334 (10%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGR 90 K+ + ++++ + W P V+++ D Y L ++ +F L + + LD IQ Sbjct: 5 PMKHTWAKGILDRMENNTWFPHVVNMADDVASYNRLNAADRFMFDKALAFLSNLDGIQFN 64 Query: 91 SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKR 150 + N + ++ PE+ + A+ E +H +SY II + DP V+ + + ++ Sbjct: 65 NINQNIAKHVTSPEVSMCLSRQAWEEALHVKSYATIIETVSLDPMSVYMTFERDGLLAQK 124 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + I ++ + + + L +S LE + F+ Sbjct: 125 NQFILK------------------------QSRLLGEKFSAEGFALSCVSNVLLEGVYFF 160 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARD-EALHLTGTQHMLNLLRSGADDPEMAEIAEEC 269 F + A++ M G+A +IR I RD E HL HML+ LR D + Sbjct: 161 SGFLSFYLLADKGEMLGSADMIRYIQRDEEGTHLDLFAHMLDTLRHENKDV----FTQSF 216 Query: 270 KQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL-PFQT 328 + ++F+ +++ E W Y+ + + N + Y++++ N+R + + P+ Sbjct: 217 WNKALEVFLTSSEMEISWGKYITKGVT----NPKAIEDYIKHLANLRAEQIQAPFVPYPG 272 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 NP PW+ + + + E V+ Y VG Sbjct: 273 VKNPFPWVEQFSKPNTSEKNFFETRVTDYKVGGA 306 >UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subunit n=4 Tax=Aquificales RepID=C0QUH3_PERMH Length = 329 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 139/326 (42%), Gaps = 21/326 (6%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSP 92 +Y +F+++ KQ W PEE+++ +D +DY++L EK +F +++ Y + + Sbjct: 23 RYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKSLTPTEKDLFDTSVGYFASSELLVQNVL 82 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 P+++ P + T F E IHS + I+ D +++ + ++ + ++ E Sbjct: 83 GNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTFEMDRKRIYNITLEDKLLMEKQE 142 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 I D + GK +L K+ L L++ E + FY + Sbjct: 143 LIIRAVDRITY----------------GKADPDTLEGKKQILTAILLNNIIQEGMFFYSA 186 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 FA FA + M+ + LI DE+LHL + + + E+ + Sbjct: 187 FAHFFAMKDTGKMKNVVSGVELILIDESLHLQNGIEAILTIVEENPEIVDD---EKFVEN 243 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNP 332 + + A + E ++ F ++ G++ L +Y++YI + R++ +G D F+ NP Sbjct: 244 IKETIIDAVELELNYLKTKFGGTTIFGVSYKELEKYMKYIADRRLEELGFDPQFKIDQNP 303 Query: 333 IPWINTWLVSDNVQVAPQEVEVSSYL 358 + ++ V EV + Y Sbjct: 304 LKFLQKEDV--KKLTNFFEVSSTEYT 327 >UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit beta n=504 Tax=root RepID=RIR2_MYCLE Length = 325 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 133/355 (37%), Gaps = 45/355 (12%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 V+ ++ + D ++ ++ FW PE+V VS D + L EK + + Sbjct: 10 DRVSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTASEKQLTMRVFTGL 69 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN--DPSVVFD 139 TLLD+IQG V+L+P P E AF E++H++SY+ I + + + F Sbjct: 70 TLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTAEIDEAFR 129 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 N +Q++A+ + YY + + Sbjct: 130 WSEENNNLQRKAKIVMEYYRGDEPLKRK-------------------------------V 158 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE+ FY F ++ R + A +IRLI RDEA+H + DD Sbjct: 159 ASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLVLVDD 218 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 E K+ Y+L + E ++ L+ + + + +++ Y N + Sbjct: 219 ----ARRAELKEYTYELLFELYDNEVEYTQDLYDRVGLT----EDVKKFLRYNANKALMN 270 Query: 320 VGLDLPFQTRS-NPIPWINTWLVSDN-VQVAPQEVEVSSYL--VGQIDSEVDTDD 370 +G + F + P I + L + SSY+ + + D D Sbjct: 271 LGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYVIGKAVVTEDEDWDF 325 >UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate reductase, small subunit n=2 Tax=Siphoviridae RepID=Q6QGJ3_BPT5 Length = 381 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 117/377 (31%), Positives = 204/377 (54%), Gaps = 11/377 (2%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 TT D + +F G + +A Y + + E+L S FW E+ + D+ + Sbjct: 2 TTLLNLNWDHTNKDLFLGDSLGIADYVRVAHPELERLALLARSQFWTETEISLEADKKQW 61 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 LP + I + NL +QT DS R+P A++PL+S PELE ++ W++ E +HSR+Y Sbjct: 62 PNLPREIQEITLLNLAWQTQTDSFISRAPEAAIMPLVSRPELEGMLKQWSYFEDLHSRAY 121 Query: 124 THIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLG--EGTHTVNGK 181 ++IIRN++ DP+ D + N++ R +DEL ++ Y+ + G +T Sbjct: 122 SNIIRNVLTDPAEFIDSVTKNQEAFARIADSVELFDELYQLGQYFIAVRDHRGDNTYPET 181 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 RE + KL ++ LEA++FY SFAC+FA AE ++++G AK ++LIA+DEAL Sbjct: 182 EFPEVKRETQAKLLDAYFAIYGLEAMQFYASFACTFALAENDILQGIAKNLQLIAKDEAL 241 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H ++ ++ ++ D ++ +E + ++ + E +W ++F+ S+IGLN Sbjct: 242 HTQMSKAIIQIMFQQFDK----DLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLN 297 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVE-VSSY 357 ++L +Y+ ++ +G++ P NPIPWI WL + ++Q APQE++ ++Y Sbjct: 298 AELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDTTSLQPAPQEIQIGAAY 357 Query: 358 LVGQIDSEVDTDDLSNF 374 VGQ+ E TD L + Sbjct: 358 RVGQVT-ETSTDTLKDL 373 >UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib beta subunit n=23 Tax=root RepID=A5VIB8_LACRD Length = 339 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 124/351 (35%), Gaps = 40/351 (11%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 +++ I + EK FW + V+ D D++ L + + Sbjct: 10 NQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRELDDDHQWTVGHVFGGL 69 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND--PSVVFD 139 TLLD++Q + AL + P + F E++H++SY+ I + +F+ Sbjct: 70 TLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIKEIFE 129 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 T E +Q +A I++ Y + + + Sbjct: 130 WSDTEEYLQNKAVKIANMYLDPSQDPLKKK-----------------------------V 160 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE FY F + + A+II+LI RDE++H T + + + Sbjct: 161 ANVFLETFLFYSGFYTPLYYLGHNKLNNVAEIIKLILRDESVHGTYIGYKFQVGLRDRTE 220 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + + K Y+ + E+ + L+ D + ++ Y N + Sbjct: 221 KQQQD----MKDWMYNFLYELYDNEEKYTHLLYDQVGWT----DDVLTFIRYNANKALMN 272 Query: 320 VGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 +G D F T S+ P + + + + Y +G +++ D+D Sbjct: 273 LGQDPLFPDTASDVNPVVMNGISTSTSNHDFFSQVGNGYRMGAVEAMNDSD 323 >UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diphosphate reductase small chain n=2 Tax=Hydra magnipapillata RepID=UPI00019243CE Length = 363 Score = 213 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 69/381 (18%), Positives = 139/381 (36%), Gaps = 55/381 (14%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + Y + K D +E + V + K+ + L +KQ +W EE+D S DR Sbjct: 25 LEYDANDEKKKDSEEEILNKDLSRLVVKPINSKHKVIWDLYKKQKDAYWTAEEIDFSNDR 84 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 D+ + ++ +H L + DSI + L I++ E E E HS Sbjct: 85 HDFLKVDKNIQHFIKRILAFFAGADSIVNINIKKKLSK-ITVKEAEIAYGFQQMMEDTHS 143 Query: 121 RSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 Y ++ I+ DP + + T I++ + + + Sbjct: 144 EVYADMLIKIITDPVERDELINAFKTVASIKRMIQWAQRWINS----------------- 186 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE---RELMEGNAKIIRL 234 K+++ ++ E + F +FA + + ++M+G + L Sbjct: 187 -------------KRRIGYSIVVFCIFEGLMFSGAFAGIYWLKKILGEDIMKGLIQSNNL 233 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 IA+DE +H + + E+ E+ +E + C A Sbjct: 234 IAKDEGMHTIFGCVIYTFIIYRLSFEEICELMKEAVEICKSFTKDAI------------C 281 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR-SNPIPWINTWLVSDNVQVAPQEVE 353 MIG+N +++ Y+EY+ + M +G + F T+ + +++T + + E Sbjct: 282 VDMIGMNVELMYNYIEYVADRLMVYLGYEKIFMTKIPDQFQFMDTIGFLN--KDNFFERR 339 Query: 354 VSSYLVGQID---SEVDTDDL 371 + Y D ++ + L Sbjct: 340 ATEYQKAYNDRNRADWNFKLL 360 >UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=UPI0001976997 Length = 347 Score = 213 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 78/375 (20%), Positives = 162/375 (43%), Gaps = 39/375 (10%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 F++ ++ + F + +D ++ +LI++ FW P+EV +S+D++ Sbjct: 7 QVRVFNENLPNKGER--MFDDVSGILFWDDIINQVYYELIKEMREVFWIPDEVSMSKDKV 64 Query: 62 DYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + + E E+ +F++ + +LDSI + I ++ + A ETIH+ Sbjct: 65 QWATEMNEMEQELFLNAIGILAVLDSIAT-YFDNVAAYYIRDSAIKALMAFVAAMETIHN 123 Query: 121 RSYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 SYT+I+ ++ + VF+ NE + +R + + +DE I+ + Sbjct: 124 ESYTYILSSVSSKAVSLDVFERPKKNEFMIRRNKLMMDLFDEFIQNPT------------ 171 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++++ LE + F F + F M G +I+ I RD Sbjct: 172 ------------PETFAKGLVAMSGLEGLCFVNGFTPFYHFNRNGKMFGTGTVIQYIQRD 219 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H ++ + + + EE + YD F + Q E+++ + L+++ Sbjct: 220 EMKHSYFQTILVRDILTQYPE----LNTEEFSEFVYDFFTELVQLEREFCEDLYKNTP-- 273 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTW--LVSDNVQVAPQEVEVSS 356 ++ + + +Y+ Y N+ + +GLD F + NP+PWI + +N + E + + Sbjct: 274 DIDIEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKRDFFEDKEVN 333 Query: 357 YLVGQIDSEVDTDDL 371 Y + + D DDL Sbjct: 334 YGKAN-EQKNDWDDL 347 >UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ8_9CAUD Length = 346 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 125/359 (34%), Gaps = 47/359 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP-EHEKHIFISNLKYQTLLDSI 87 Y Y F L+ K W +E ++ D D++ + E+ L T D + Sbjct: 17 YKPFLYQEFYDLMTKHEDAHWVKQEAELGDDVNDWRNRSSDDERSFIKEILTVFTQGDVV 76 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + +P E+ W+ A E IH +Y P +F +++ Sbjct: 77 VADNYKSIFIPAFKNNEVSNWLVGVAAREVIHQDAYAMANETFGL-PDSMFGRFREYQEM 135 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 ++R + +++ YD + + L + L+ E + Sbjct: 136 RERNDLMATQYD----------------------------PSMVEGLAMGLVHTTFNEGV 167 Query: 208 RFYVSFACSFAFAE---------RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD 258 +FA F R +G KI + RDE +H+ G+ + + Sbjct: 168 CLMGAFANLLQFNRFDVPGFNGYRGRYKGLTKINKWSLRDEGIHVEGSSLLYRKVMGEHP 227 Query: 259 DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQ 318 + +E K++ YDL E + D F+ + + KD YV Y+ N R+ Sbjct: 228 ----WLMTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLT-MTKDESKAYVRYMMNRRLL 282 Query: 319 AVGLDLPFQTRSNPIPWINTWLVSDNVQ--VAPQEVEVSSYLV-GQIDSEVDTDDLSNF 374 +G F+ + P PWI L + E V +Y G + E+D ++ Sbjct: 283 QLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQASGALVGELDWSKVNQL 341 >UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystivirus RepID=Q678G9_9VIRU Length = 374 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 131/355 (36%), Gaps = 42/355 (11%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--ALPEHEK 71 LK +F Y Y +L + W +E+ ++ D D++ L + EK Sbjct: 60 LKRRLFEYNAS----YKPFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEK 115 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 L+ T LD G+ + +P+ E+ + ++A E H ++Y + + Sbjct: 116 KFITQILRLFTQLDVSVGQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDTLG 175 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 P + + +Q+ + + +S + I Sbjct: 176 L-PESDYSAFLKYKQMTDKTDFMSDMRTDTIG---------------------------- 206 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 + L+ E + + +F F +M+G K++ RDE +H+ G + Sbjct: 207 -NVAFSLVKAVYNEGVSLFAAFVMLLNFQRFGVMKGMGKVVEWSIRDENVHVEGLCKLFK 265 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + S + ++ + L + + E + D +F + + L + + YV+Y Sbjct: 266 TIVSEYP----FILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKNLKRVDVINYVKY 321 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 I R +GL + NPI W+ +WL+S E V+ Y VG ++ + Sbjct: 322 ILQRRTVQLGLSNKTDLQ-NPILWV-SWLISGRDVTNFFENRVTEYDVGGLEGDW 374 >UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9V1_HYDS0 Length = 319 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 134/327 (40%), Gaps = 35/327 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSI 87 D Y L K + +W PEE D++ D+ ++ + L + E+H + + + + + Sbjct: 25 LDSVVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGW 84 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 G++ + I E ++ E H ++ +I+ + P V+ ++I Sbjct: 85 VGQNILE-ISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLDLKPHEVYAMHENVKEI 143 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +++A+ L E + +L+ + + LE + Sbjct: 144 KRKADFEVKRAMALCEEPTEENLIED-----------------------IFVYYAILEGL 180 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 F+ F AF R +++ A ++R I +DE HL ++LN L + Sbjct: 181 FFFSGFVTPLAFGRRGVLKNVAALVRWILKDETRHLAFGIYLLNELLKDKNK-------N 233 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 + K + L +A E ++A + +IGL+ + YV+Y+ + RM+++G D + Sbjct: 234 DYKDKFRVLMEEAVDIETEYARVAMPE-KIIGLSFETYTSYVKYLADRRMRSLGFDAIYG 292 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEV 354 + NP+ W+ T ++ E +V Sbjct: 293 -QKNPMKWLTTQTDLPDL-TNFFEAKV 317 >UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bacillaceae RepID=B1HSG7_LYSSC Length = 318 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 130/351 (37%), Gaps = 39/351 (11%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 +++ ++ + ++Q W PEE+ VS+D +++ + + TL Sbjct: 2 YEAVNWNKATSELAQIFWDQQWKQIWFPEEIAVSKDIQQWKSF--EHQDTYKKVFAGLTL 59 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP--SVVFDDI 141 LD++Q + + + + + E IH++SY++I + + +F+ + Sbjct: 60 LDTVQTNIGMNRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWV 119 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 NE +Q +A I+ Y+ + E + L+ + S Sbjct: 120 KKNEYLQYKANKIADIYNSIEEG-------------------------DAESLWKAMFSS 154 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F + + +A+II LI RDE++H L + Sbjct: 155 VMLESFLFYSGFFYPLYLGGQGFLRNSAEIISLILRDESIHGVAVGFFAQNLYKQFSKEK 214 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 E + Y+L + Q E + + ++ + + + YV Y N + VG Sbjct: 215 Q----EALQLWGYELLLDLYQNEMKYTEDIYAETGL----SPEVKAYVRYNANKALMNVG 266 Query: 322 LDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + F P + + ++ + ++Y ++ + + D + Sbjct: 267 FEAMFP-EEEVNPIVMNGIRNEGSTYDFFSQKGATYAKAKV-APITDDTFN 315 >UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0JA50_BLASP Length = 357 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 125/350 (35%), Gaps = 36/350 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLD 85 + +Y + KQ + W E+++ D D+ L + EK++ LK + Sbjct: 8 LNFKPFEYQWAYEYWFKQQNAHWLHTEINMQSDIYDWNKNLTDQEKNVIGDILKGFAQTE 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 + G + + IPE++ + + ETIH+ +Y+++ + D F + ++ Sbjct: 68 TEVGNYWSEMIPKWFPIPEIKMMGQAFGSFETIHAAAYSYLNDILGLD---NFHAFLEDD 124 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I + + + + ++ + A E Sbjct: 125 VIMNKLKSLMDV-----------------------RNSDHGKYNKEEIARSVALFSAAAE 161 Query: 206 AIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 ++ + SFA +F + ++G + I RDE+LH + + Sbjct: 162 GVQLFSSFAVLLSFRKSNRLKGVGQQIIFSVRDESLHSEAGCKIFRTFCEENK-----GL 216 Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 E ++ Y A + E + D +F + + ++ L +++ N++++ +G Sbjct: 217 KEIVERSVYHGVDLALKNEFVFIDKIFGGRDLCTIKREELKNFMKDRANMKLRELGFFDS 276 Query: 326 FQTRSNPIPWINTWL--VSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSN 373 + + +N + +S Q + + Y + + D S+ Sbjct: 277 YHVDRRMLDNMNWFYITISGEQQTDFFDNRETGYSKPN--EDWNEDLFSS 324 >UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6V3_SULNB Length = 337 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 72/375 (19%), Positives = 146/375 (38%), Gaps = 44/375 (11%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 ++ + L E ++ G P +++ KY + + + W P EV+ S ++ + Sbjct: 4 KHYYNPQGEEILDEKIYGGSPTGFVDFNRSKYRWDSNIYDLMNANTWFPSEVNTSTEKKN 63 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 ++AL ++E+ I+ + DS Q L + +++ + E HS+S Sbjct: 64 FEALTDNEQSIYKMTFAQLSFNDSAQ-EEYLSDFRRLANNRLVKSVISLQIMQEVNHSKS 122 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 Y ++ + VF+ + + K+ ++ + + I+ S Sbjct: 123 YAVLLDACG-NSEEVFNLYKYDAALNKKNLQVAEQFAKYIDGGSA--------------- 166 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE-AL 241 K+ L M+ LE I F + F+ + + + G +I+ IARDE Sbjct: 167 ---------DKMLLSAMASVNLEGIYFLLGFSYIYLLG--DKVPGARDMIKFIARDELNT 215 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL ++ ++ + IA Y + A + E ++ YL ++G+ Sbjct: 216 HLPLFANIFKTIQKENN------IATSTIDAAYKMIQDAVKIELEYGHYLLDQFPIMGVT 269 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRSNPI--PWINTWLVSDNVQVAPQEVEVSSYLV 359 +++ Q V N R++ +GLD F + + L + V+ E VS+Y Sbjct: 270 HELMEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKSNFFESNVSNYAK 329 Query: 360 GQIDSEVDTDDLSNF 374 I DL++F Sbjct: 330 SSI-------DLNDF 337 >UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=C7NA19_LEPBD Length = 335 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 69/351 (19%), Positives = 131/351 (37%), Gaps = 34/351 (9%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 ++ + D E E+ L FW E S+D + +L K ++ L TL Sbjct: 6 YEAVNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVLGGLTL 65 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDI 141 LD++Q + ++ I + + + ETIH++SY+ I + + F + Sbjct: 66 LDTLQSHTGMPKIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWV 125 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 N +Q +A I +YY ++ + K+ + + L + Sbjct: 126 QENPHLQYKANKIDTYYQKM-----------------------NNPEASKRDIAMALAAS 162 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE FY F A + M + II+ I DE++H + L + + E Sbjct: 163 VYLETYLFYSGFFLPLWLAGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEE 222 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 A++ E K+ L + E + D ++ D + G + +Y+ Y N + +G Sbjct: 223 KADMRAELKK----LMYDLYENETRYTDEIYGDLGLTG----NVKEYIRYNANKALMNLG 274 Query: 322 LDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + F+ N P + L + Q + ++Y + DD Sbjct: 275 FEEEFEV-KNVNPIVLNGLNVETTQHDFFSKKSTNYEKALEVVHLHDDDFK 324 >UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chain n=4 Tax=unclassified Myoviridae RepID=C5H7Q1_9CAUD Length = 357 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 82/362 (22%), Positives = 164/362 (45%), Gaps = 10/362 (2%) Query: 13 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKH 72 + P+F G + Y +L ++Q + W +E + R+D++++P Sbjct: 2 INQHPIFLGGERKTFDSLNKHYPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSG 61 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 + + LK+Q D+ +S A P IS T + + E +H+ +Y+ I+R + Sbjct: 62 VMLEILKWQWEADTQVAKSLAFAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIK 121 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +P + D+I N +Q R + ++ +EL++ + L ++ K Sbjct: 122 NPETILDEINQNVAVQDRLKTVNRVLEELLDEGINYRLSYVRDSLLD-----KDPLHFHK 176 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + L +V ALE I F SFAC+FA ++ +G A+ ++ I DE LH + + Sbjct: 177 VILKGLFAVTALEGISFMASFACTFALDAQDKFQGIAQAVQKIMLDEILHTK---IDIEV 233 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLNKDILCQYVEY 311 L+ D E + ++ E + + + E+ W+ Y+F +G +++GLN +L ++V Y Sbjct: 234 LKETLRDDEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAVVGLNTKLLHEWVYY 293 Query: 312 ITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 G+ F + P+ ++ + D Q A QE + +YL+ + ++++ Sbjct: 294 NAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGAYLLNTVVDDLNSGF 353 Query: 371 LS 372 L Sbjct: 354 LE 355 >UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Deinococcus RepID=Q1IXG4_DEIGD Length = 319 Score = 208 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 118/349 (33%), Gaps = 44/349 (12%) Query: 23 PVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQT 82 + + + + +Q + W EE+ ++ D D++AL E+ + Sbjct: 2 SKSATNWSEVGDGFTQAFYIQQQAQLWFSEEIPIASDAADWRALSPAERTCYTRVSAGLN 61 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV--NDPSVVFDD 140 +D++QG L + + + +AF E +H+RSY+ + + ++ F+ Sbjct: 62 AMDTLQGEVGMPLLAAGEDDHQRKATLAMFAFMENVHARSYSMANKTFLSASEEREAFEW 121 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 I +Q++ Y+E +++ Sbjct: 122 IEMQPHLQRKITVFRRLYEEGDA-------------------------------LTRMLA 150 Query: 201 VNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 LE FY F A + M ++ LI DEALH + + + Sbjct: 151 SCLLETALFYSGFFYPLYLAGQGKMSHMGEVFTLICADEALHGSYVGLLFQERFAALPQG 210 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 E A + +Q L + + E + D ++ + + + +V Y NI + Sbjct: 211 EQAAVRARFEQ----LAREFYENECAYTDEVYAEVGL----ASEVKTFVRYNFNICCDNL 262 Query: 321 GLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVS-SYLVGQIDSEVD 367 GL+ F NP+ +N + ++ + Y + D Sbjct: 263 GLERLFPEEEVNPL-VLNGIRATGGTTHDFFSIKGAGGYAKITAEPLTD 310 >UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta subunit n=83 Tax=root RepID=Q5HMW6_STAEQ Length = 340 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 70/368 (19%), Positives = 140/368 (38%), Gaps = 43/368 (11%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 M +D+ I ++ + W EE S+D ++ L E+ ++ Sbjct: 1 MTREIKARATNWDK-DNSIALTYWKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKA 59 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV 137 L T LD+ QG L + E IH +SY+HI +++ Sbjct: 60 LSGLTGLDTTQGTEGMPLLAFHYPEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTH 119 Query: 138 F---DDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 + + + N+ + K+ + I++ Y +L+ +++ Sbjct: 120 YYLKEWVPANKYLNKKTKLITTNYYKLL-----------------------KPNPTDREI 156 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 Y+ + S LE+ F+ F A + M + +IIR I DE +H +GT + ++ Sbjct: 157 YVAMASSIFLESFLFFSGFYYPLYLAGQGKMVHSGEIIRKIILDETIHGSGTGYAAQVIF 216 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 E +I +E +LF Q E ++A L+ + + + +Y++Y N Sbjct: 217 DKFSKEEQEDIRKEL----MELFDQLYFNEVEYAASLYDKLGLT----EDVIRYIQYNGN 268 Query: 315 IRMQAVGLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI-----DSEVDT 368 + +G + F NPI + L +D V+ Y + D + D Sbjct: 269 RALMNLGWETVFNPEPFNPI--VENGLRTDTTNHDFFSVKGDGYTLALNQVPLRDKDFDF 326 Query: 369 DDLSNFQL 376 +++ +++L Sbjct: 327 NNVISYEL 334 >UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain n=1 Tax=Escherichia phage rv5 RepID=B3RGP5_9CAUD Length = 362 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 89/364 (24%), Positives = 166/364 (45%), Gaps = 15/364 (4%) Query: 11 NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 + P+F GQ + + +KY +L +KQ W +EVD+S+ D+ + Sbjct: 11 HKTGDYPLFLGQQMGMYDSINKKYPQLFELYKKQKEQDWAEDEVDLSQSISDFVTCSKST 70 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 + + L +Q DS+ RS P I+ EL T + + E +H+ +Y+ I+R Sbjct: 71 YDVMVQTLMWQWEADSVAARSIICLFSPFITNSELFTLLMKQSEIEVLHALTYSEIVRQC 130 Query: 131 VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 + + + ++I N+ + R+ I Y EL + + + L + + Sbjct: 131 LPNAREIIEEIQENQNVLSRSGVIVKYMQELEVIGAKYRLDPSSVKEDIVRKCILRALFA 190 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 L E+I F SFAC+FA AE+ + A++++ I DE LH G ++ Sbjct: 191 LLAL----------ESIEFIASFACTFAVAEQGIFVQVAQLVQKIMLDEMLHSKGDFAII 240 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLNKDILCQYV 309 ++L +DP + E K E ++ + +E W+DY+F +G ++IGLN +L ++V Sbjct: 241 DIL---LNDPAWEKSFLEIKGELKEILDEVRTKEYGWSDYIFSEGRAIIGLNSPLLKEWV 297 Query: 310 EYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 +Y + G+D F +P+P++ W+ Q A QE+ + Y V ++ + Sbjct: 298 DYNCSPIYDYYGIDKDFVPPTKDPLPFMQVWMKPSLQQTANQEMSNTDYRVNTTVNDAEE 357 Query: 369 DDLS 372 + Sbjct: 358 EIWE 361 >UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Bacteria RepID=RIR2_MYCGE Length = 340 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 68/374 (18%), Positives = 134/374 (35%), Gaps = 44/374 (11%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 F ++ + F + ++ + ++ + + FW PE++ VS D Sbjct: 6 KKYFLESFSPLGYVKNNFQGNLRSVNWNLVDDEKDLEVWNRIVQNFWLPEKIPVSNDIPS 65 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 ++ L + + + TLLD+IQ ++ + + +AF +H+RS Sbjct: 66 WKKLSKDWQDLITKTFTGLTLLDTIQATIGDICQIDHALTDHEQVIYANFAFMVGVHARS 125 Query: 123 YTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Y I + + + +V E +QKRA+ + YY + S Sbjct: 126 YGTIFSTLCTSEQINAAHEWVVNTESLQKRAKALIPYYTGNDPLKSK------------- 172 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 ++ + Y F F + R+ + + IIRLI RD+ Sbjct: 173 ------------------VAAALMPGFLLYGGFYLPFYLSSRKQLPNTSDIIRLILRDKV 214 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 +H + + +E K ++L + + EKD+ L+ ++ Sbjct: 215 IHNYYSGYKYQRKLEKLP----LAKQKEMKAFVFELMYRLIELEKDYLKELYEGFGIV-- 268 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVS-DNVQVAPQEVEVSSYL 358 D ++ Y +Q +G D PF + P I L + + SSY+ Sbjct: 269 --DDAIKFSVYNAGKFLQNLGYDSPFTAAETRIKPEIFAQLSARADENHDFFSGNGSSYV 326 Query: 359 VGQIDSEVDTDDLS 372 +G + E + DD + Sbjct: 327 MG-VSEETNDDDWN 339 >UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Bacteria RepID=A1XG51_BORHD Length = 321 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 124/355 (34%), Gaps = 38/355 (10%) Query: 20 FGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLK 79 Q +++ + ++ + FW EE+ +S D++ + L E+ ++ L Sbjct: 1 MKQNREAINWNRLNNSYTKMFWDQNIRQFWVDEEIPISDDKLVWNTLDGEERDVYEKVLG 60 Query: 80 YQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVV 137 TLLD+ QG L I + + + E +H++SY+ I ++ ++ + Sbjct: 61 GLTLLDTEQGSVGMPRLALAIDNLDYKPVLGFMGAMEHMHAKSYSSIFSSLSNIDRIDHI 120 Query: 138 FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 F + T Q + + I Y+ + + LY Sbjct: 121 FGWVKTYRNFQDKLDLILGKYNSI---------------------------HDRMSLYKA 153 Query: 198 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 L + LE FY F A + M + +II LI RDE++H + + Sbjct: 154 LCTSVFLETFLFYSGFFYPLYLAGQGKMVNSGEIINLILRDESVHGVFVGLLAQEEFNKM 213 Query: 258 DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRM 317 E ++E + + E + L+ + G + +V Y + + Sbjct: 214 TFKEQ----AFAQREATLILERLYYLESAYTKDLYSSIGLEGA----VDVFVRYNADKAL 265 Query: 318 QAVGLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 +G D F R + P + L ++ + + Y+ + DD Sbjct: 266 MNLGFDSAFNIRDIDVNPLVLNGLRTNTKTHDFFSTKGNGYIKPMRVEPLQDDDF 320 >UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7_9CAUD Length = 387 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 81/392 (20%), Positives = 158/392 (40%), Gaps = 35/392 (8%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + F+ K+D + G + Y +L ++ W E D S Sbjct: 7 LPKKIFNVAKSDYHLPEIILGDDPGLLDSIHTHYPKMWELYKRLKMLDWDELEFDFSTCL 66 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 ++++ + + I L +Q DS+ RS L P+++ + +E +H+ Sbjct: 67 VEFETCDKSTYDMMIKTLAWQWEADSVASRSIVNILSPVMTDSRVWAGYVRINDNEDVHA 126 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 +Y+ I+RN DP V+ D+I+ E+ Q+R ++ E + + L Sbjct: 127 LTYSEIVRNSFKDPKVILDEILRVEEAQERMVAVARTMGEAHDAVHAYAL---------- 176 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE- 239 + +EL K+++ +++ LE I+F SFA +FA + A ++ IA+DE Sbjct: 177 -NQVPNDQELYNKVFMFFIALYFLERIQFMASFAVTFAIGRTGAFQQIAAAVKKIAQDEF 235 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMI 298 +H Q ++ L +CK + +L + + E W +YLF +G + Sbjct: 236 EIHAQYGQEVIRAL---LATERGKLAYSQCKDKIIELLWEIVKTEVTWINYLFSEGRELT 292 Query: 299 GLNKDILCQYVEYITNIRMQAV------------------GLDLPFQTRSNPIPWINTWL 340 G+N L +V + N + G D + NP+ ++ +L Sbjct: 293 GVNATKLINWVLFNANAAATFLSIENDVVEQYQVEFKESAGFDFVWP-EKNPLLYMEDYL 351 Query: 341 VSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + Q +PQE E Y+V ++ + ++ Sbjct: 352 DISSTQASPQEEEKPDYMVNVVNDVGEEEEFE 383 >UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Brachyspira RepID=C0QY28_BRAHW Length = 356 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 83/358 (23%), Positives = 154/358 (43%), Gaps = 19/358 (5%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 E +FFG + R D +++ KL E W +EVD D+ + +LPE + F Sbjct: 12 NEKIFFGDFGHYLRIDSVSHEVARKLKEASEGNTWFSKEVDYKSDKTRFSSLPEDAQRAF 71 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRN-IVND 133 N+ YQTL+DS + L +++ A E IH+ SY++ + ++ Sbjct: 72 KLNIAYQTLMDSGVTSGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHE 131 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 + D + +E ++ R E L G N + +L E K+ Sbjct: 132 ATDTLDLVYNDEFVKHRME-------------KEVELFGNVDELCNLENSPATLDEKKQA 178 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAER--ELMEGNAKIIRLIARDE-ALHLTGTQHML 250 + L+ + LE+++F SF +F + G K I+LIA DE H+ ++++ Sbjct: 179 VLKLLIGIYLLESVKFPFSFLVTFTINNNYDNAIAGFTKTIKLIAHDELNTHVPTGKNVM 238 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQA-AQQEKDWADYLFRDGSMIGLNKDILCQYV 309 N+LR + E + +E WA YLF + G+N + ++ Sbjct: 239 NILRKENEQGFTHLFKSGWFNETARAMAEFTVNEEIKWAKYLFDGYQVAGINSSVSEHFI 298 Query: 310 EYITNIRMQAVGLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 +Y +R++ +G++ P+ + + I W N++ + A QE +SY G + +++ Sbjct: 299 KYWAGVRLRDLGVESPYNEKKSDVIDWFNSYRDINKQNAALQETTNTSYQKGALKNDL 356 >UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TFJ9_VANPO Length = 351 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 118/345 (34%), Gaps = 49/345 (14%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--A 65 + K Q E + + KY +K+ + FW EE+D S+D ++ Sbjct: 18 ELKELQKDESILTENKRRFVLF-PIKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDK 76 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 + + EK FI L D + + L PE + + + IH Y Sbjct: 77 ITKDEKEYFIRLLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGI 135 Query: 126 IIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +I ++V D +F++I I+++ E S+++ Sbjct: 136 LIDSLVKDDEKRTSMFEEIKDLTNIKEKIEYAKSWFE----------------------- 172 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L++ A+ I ++ +F + L+ G + + RD LH Sbjct: 173 ------NEDNLFGEKLIAEAAVLGIFSLSAYVSVLSFQKGGLIPGFVTGVDNMLRDRGLH 226 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 + M L++ D + + V A + EK + L Sbjct: 227 VDFCCLMYAHLKNQIDS-----------EIVQKIIVDAVEIEKKSLLKALPIIKV-NLKI 274 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQV 347 D + Q++EY+ + + A G + + NP ++ ++ N Sbjct: 275 DEMNQFIEYVADSILVAFGNEKHYNAT-NPYEFMENVVLPGNTNS 318 >UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), beta subunit n=6 Tax=Bacteroidetes RepID=C6X1E6_FLAB3 Length = 324 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 136/348 (39%), Gaps = 39/348 (11%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 Y +Y + +E FW EVD + D D+Q+ L HEK+ + L ++ Sbjct: 10 YKPFEYPEIMQFVEAINKSFWVHSEVDFTADVQDFQSQLEPHEKNAVKNALLAIAQIEVS 69 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 ++ L + PEL T+A E HS +Y+ ++ + + F+ +V I Sbjct: 70 V-KTFWGNLYNHLPKPELNGLGSTFAECEFRHSEAYSRLLEVLGYN--DAFNHVVEIPAI 126 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +KR + +S+ + K+ + L+ +E + Sbjct: 127 KKRIDFLSNVLKHA------------------------NSTTPKEYVSSLLLFSILIENV 162 Query: 208 RFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + FA +F + M+ + II + DE +H +++N +R D + Sbjct: 163 SLFSQFAIILSFTRFKGYMKNVSNIIAWTSVDEQIHANAGIYLINKIREEQPD----LLT 218 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + ++ Y L + + E + D++F G + ++K+ L +++Y + ++ +G+ + Sbjct: 219 DSDIEDIYTLVDHSIELEAEILDWIFEMGEIDNVSKENLLNFMKYRVDDSLKKIGMQTRY 278 Query: 327 QT---RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 P+ W + ++++ Y D + +DL Sbjct: 279 NVSGDEYRPMVWFEEEVFANSM-DDFFAKRPVDYTKH--DKSITENDL 323 >UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P4N2_FUSNV Length = 245 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 28/248 (11%) Query: 3 YTTFSQTKNDQLK-EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 F+ +D L + G N+ + +Y +L ++ FW PE+VD+++D+ Sbjct: 8 KKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 67 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY+ L E+ + L + LDSIQ + + ++ PE+ + F E IHS+ Sbjct: 68 DYENLTVPEREAYDGILSFLIFLDSIQTNNI-PNISDHVTAPEVNLLLAIQTFQEAIHSQ 126 Query: 122 SYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 SY +II +I+ +++D ++ + +R I+ Y + I+ Sbjct: 127 SYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFID---------------- 170 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 + + +++ LE++ FY F + A R M G + IIRLI RDE Sbjct: 171 --------EQSDENFAKVIIANYLLESLYFYNGFNFFYLLASRNKMVGTSDIIRLINRDE 222 Query: 240 ALHLTGTQ 247 H+ + Sbjct: 223 LSHVVLFR 230 >UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436B Length = 322 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 124/342 (36%), Gaps = 37/342 (10%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGR 90 Y + + Q S FW +E++V +D D + + E E H I+ L+ TL + + GR Sbjct: 13 FDYPEAIQFAKVQSSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLFTLYELVAGR 72 Query: 91 SPN-VALLPLISIPELETWVETWAFSE-TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 +L P++E T+ F E +H+ Y I ++ + + V + ++ Sbjct: 73 DYWLGRVLKTFPRPDIERMAATFGFFELNVHAPFYNKINEALMLNTDEFYLAYVNDPILK 132 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 +R E + S +E L + + +E Sbjct: 133 ERMEFVDSLVEEDDP-------------------------------LYSLGAFSMVEGAV 161 Query: 209 FYVSFACS--FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 Y SFA F + + + I RDE LH G + N L+ E I Sbjct: 162 LYSSFAFLKHFQAKGKNKLMNVVRGINFSVRDENLHCEGGAWLYNTLKQEIKS-EGGYIN 220 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + + A+ E D +F G M G+ + + +V+ NI + +G++ F Sbjct: 221 PNLEYDLANCAHTIAEHEFRIVDMIFEKGEMEGITAEQMKTFVKSRVNICLAQLGIEPVF 280 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 + +N + ++ + +SY + + Sbjct: 281 EVSNNIVAEWFYDGINGVMFHDFFSGIGNSYNRSWDEKGFNW 322 >UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 Tax=Caenorhabditis elegans RepID=Q20993_CAEEL Length = 500 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 33/224 (14%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 EP+ + + + +K ++ FW EEVD+ +D ++ L E+ Sbjct: 307 EPLLAPNNNRFVVH-PIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFIS 365 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 S L + D I + + + E + E IHS Y ++ + D + Sbjct: 366 SILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDA 425 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +F+ I T + I+ +A+ + + Sbjct: 426 ERNILFNAITTFKFIKAKADWCLRWISDHNAP---------------------------- 457 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 L +V A+E I F SFA F +R L+ G LI+ Sbjct: 458 -FSERLAAVAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELIS 500 >UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Ostreid herpesvirus 1 RepID=RIR2_OSHV1 Length = 579 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 131/388 (33%), Gaps = 67/388 (17%) Query: 2 AYTTFSQTKNDQL---KEPMFFGQPVNVAR---------YDQQKYDIFEKLIEKQLSFFW 49 + + + ++ P++ G + Y K S W Sbjct: 35 QFEILNTSYDELTEFDDHPLYGGATDHHKDIVGKYDHALLKPAVYQQLRDFATKMESSSW 94 Query: 50 RPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWV 109 + E+D D ++ + E+E+ L + + D++ +PE + ++ Sbjct: 95 QQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKDRIA-IFADEFPLPECKDFI 153 Query: 110 ETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ-----IQKRAEGISSYYDELIEM 164 + +E +H R Y + + +V D + D + + I+K+ + + + Sbjct: 154 DWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPEFAPIKKKVDWLGKIISVENDS 213 Query: 165 TSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAEREL 224 ++ EAI F SFA F Sbjct: 214 R-----------------------------GEMVVGQVCTEAIMFAASFAILLKF-RAPY 243 Query: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284 M I RDE LH +L L+ D + +L +A + E Sbjct: 244 MRALVLGNEFIRRDETLHFRFYAELLRLMPDRPSD-----------ERIAELLTEATEIE 292 Query: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF-----QTRSNPIPWINTW 339 ++A+Y+ +G + + KD L Q+V+ TN + + ++ + +P+ ++NT Sbjct: 293 LEFAEYVVPEG-VKYITKDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNT- 350 Query: 340 LVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 + ++ E + + Y Q + + Sbjct: 351 -LESEQKINFFEGKATEYNTKQYKVDFN 377 >UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome shotgun sequence. (Fragment) n=2 Tax=Euteleostomi RepID=Q4TC55_TETNG Length = 369 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 4/147 (2%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + +Y ++ +K + FW EEVD+S+D +++L + E+ Sbjct: 1 EEPLLKENPRRFVIF-PIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFI 59 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + + E + E IHS Y+ +I + +P Sbjct: 60 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEP 119 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYY 158 S +F+ I T ++K+A+ ++ Sbjct: 120 SEREYLFNAIETLPCVKKKADWALNWI 146 Score = 47.4 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 13/42 (30%), Gaps = 2/42 (4%) Query: 330 SNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 NP ++ +S + E V Y + + + Sbjct: 324 ENPFDFMEN--ISLEGKTNFFEKRVGEYQRMGVMAGAADNTF 363 >UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=Q19CR4_9CAUD Length = 332 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 113/345 (32%), Gaps = 39/345 (11%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQG 89 KY F KL ++Q+ FW +E V D D + L E + + LK T+ + G Sbjct: 18 IIKYPEFGKLADEQMHAFWPWDEPVVDNDIQDLRTKLTPGELNGITTVLKLFTIYERKVG 77 Query: 90 RSPNV-ALLPLISIPELETWVETWAFSETI-HSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + PE+ ++ E H+ Y + + D + +E++ Sbjct: 78 EDYWSGRIAHTFGRPEINRMATLFSAVEGNSHAPFYNKVNEVLYLDDEAFYTSWKESEEL 137 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +R + + ++ + + +E Sbjct: 138 SRRIQFVGKSVNDPDD-------------------------------AKSFAAFTFIEGA 166 Query: 208 RFYVSFACSFAF----AERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 Y SFA F ++LM + + L DE H G + L + Sbjct: 167 VLYSSFAFLKHFQAQECGKDLMRNICRGVDLSVADEHHHSIGGAMLFQTLCREMKEKYGE 226 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 ++ + K + ++ Q E D +F + + G+ D L +V+ N+ ++ +G + Sbjct: 227 DVRAKLKNDIINMARQVFDHESGIIDLVFAE-PIDGITADELRVFVKSRINLCLENLGYE 285 Query: 324 LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 F+ +NPI ++ S Y + Sbjct: 286 PIFEIENNPIADWFYRTINAKKFHDFFTGSGSEYNINWNREGFSD 330 >UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TLQ4_VANPO Length = 361 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 121/335 (36%), Gaps = 47/335 (14%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QA 65 + + Q KEP+ K+ +K+ + FW EE+D S D I++ + Sbjct: 31 LEVEESQSKEPILMENKSRFV-LMPIKFHTVYDGYKKREALFWPAEEIDFSHDIINWGKK 89 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 +H+K I +L + + + + IPE + + E IH Y+ Sbjct: 90 ASDHDKSIIKKSLAFLCSS-VLGSFYLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYSL 148 Query: 126 IIRNIVNDPSVV---FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 I +V++ + F D+ + I+++ ++D+ Sbjct: 149 AIDQLVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDK---------------------- 186 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L++ +++EAI VSF + +++++ G I+LI +D +H Sbjct: 187 -------ESSLFAEKLVAFSSIEAIFSLVSFFSIMSLEKKDIIPGLISGIKLILKDHIVH 239 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 + + L+ D + +A + E + + + + + K Sbjct: 240 CDFQMSIYSELKKRLDPG-----------IIERIVTEAVEIELETLEDDYFNKQLDKETK 288 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 + +EY+ + + G F + +NP + Sbjct: 289 ADIKNVIEYVGDRVLMGFGNQKHFHS-ANPYDNLE 322 >UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ5_FLAJ1 Length = 324 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 123/347 (35%), Gaps = 37/347 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLD 85 Y +Y + E +W EVD + D D+ L EK ++L ++ Sbjct: 8 VNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHAHLSLAEKTAVKNSLLAIAQIE 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 +S + PE T+A E HS +Y+ ++ + + F+ ++ Sbjct: 68 VAV-KSFWGNIYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDE--FEKLLDVP 124 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I++R + +S+ + ++ +K + ++ +E Sbjct: 125 VIRRRVDYLSNVLKD------------------------TKSQDNRKYMVSLILFSILIE 160 Query: 206 AIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 + + FA +F + M+ + II + DE +H G +++N +R D Sbjct: 161 NVSLFSQFAILLSFTRFKGYMKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPD----Y 216 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 EE + + E D D++F +G + + K L ++++ + ++ + + + Sbjct: 217 FDEETLALVRETVKDSIAVESDILDWIFEEGEIESIKKGDLVNFMKFRIDESLKQINIPV 276 Query: 325 PFQT---RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 F + W + ++++ Y + Sbjct: 277 IFDVKVEDYKALAWFEEEVFANSL-DDFFAKRPVEYTKHDKSITAND 322 >UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subunit 1 n=23 Tax=cellular organisms RepID=Q3IM05_NATPD Length = 336 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 46/346 (13%), Positives = 122/346 (35%), Gaps = 35/346 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLD 85 + +Y F + + +W E + S D D++ EK + + ++ Sbjct: 20 TQLKPYEYADFLDYKDAIRNSYWVHTEFNFSGDVQDFRTNTTPAEKTVIKRTMLAIAQIE 79 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 +Q ++ + + E+ T+A SE H +Y+H++ + F+++ Sbjct: 80 -VQVKTFWADIYDEMPKTEVGNVGMTFAESEVRHMDAYSHLLDILGITED--FEEVTDVP 136 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I+ R E + Y ++ + ++ + L+ +E Sbjct: 137 AIEDRIEYLDKYLEK------------------------SESDDKQEYVMSILLFSTFVE 172 Query: 206 AIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 + + F +F + ++ +G A + +++E +H ++ +R D Sbjct: 173 HVSLFSQFLIMMSFDKYKKKFKGIANAVEATSKEEQIHGLFGVELVETIREENPD----L 228 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 E+ ++E +A + E D++F +G + L + + ++ N ++ VG++ Sbjct: 229 FDEDFEEEVQAACQRAFEAEMKILDWIFGEGELEFLPRTHVDAFLRDRFNQSLENVGVEP 288 Query: 325 PFQTRSNPIPWINTW--LVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 F+ + + + ++Y + Sbjct: 289 IFEPDDGLLEETRWFDEDIMMTKDNDFFSKRSTTYNKHAQSVTAED 334 >UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Environmental halophage 1 AAJ-2005 RepID=Q2XUY1_9VIRU Length = 358 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 121/344 (35%), Gaps = 35/344 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSI 87 +Y F ++ + +W +E + D DY+ E+ + ++ + Sbjct: 44 LKPYEYTDFLDYVDAVRNSYWVHDEFNFDGDIQDYRVNTTPAEQTTIKRTMLAIAQIE-V 102 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 Q ++ + + E+ T+A SE H +Y+H++ + + F+ I + Sbjct: 103 QVKTFWSDIYEDMPKAEVGNVGMTFAESEVRHMDAYSHLLDVLGIEDE--FEQITEVPAV 160 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 Q+R E + Y + S ++ + LM +E + Sbjct: 161 QQRIEYLDEYLE------------------------MGSSENKQESVMGILMFSTFVEHV 196 Query: 208 RFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + F +F + + +G A + +++E +H Q ++ +R D Sbjct: 197 SLFSQFLIMTSFDKHEKKFKGIANAVEATSKEEQIHGLFGQELVETIREENPD----LFD 252 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 ++ E D QA + E + D++ DG + L ++ + +++ N + G+D F Sbjct: 253 DDFTDEIQDACQQAYEAESEILDWILEDGELDFLPREHIDAFLKDRFNQSLDNAGVDPVF 312 Query: 327 QTRSNPIPWINTW--LVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 + + + + + ++Y D Sbjct: 313 DPDEDVVDETRWFDEDIMMTKENDFFSKRSTTYNKHTQSVTADD 356 >UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD86 Length = 224 Score = 167 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 29/233 (12%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TL Sbjct: 9 HNAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTL 68 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND--PSVVFDDI 141 LD+ QG + +++ L + + + E IH++SY+ I ++++ +F+ I Sbjct: 69 LDTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWI 128 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 T +Q++A+ + + Y+ ++ LYL +++ Sbjct: 129 ETEPTLQRKADLVLAQYE---------------------------NTTNQEGLYLSMVTS 161 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 LE+ FY F + + M + +II LI RDE+LH + + Sbjct: 162 VFLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLAQEIY 214 >UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain n=247 Tax=Herpesviridae RepID=RIR2_HHV1K Length = 340 Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 100/336 (29%), Gaps = 46/336 (13%) Query: 35 DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 L + W E+ D D L E E + + + D + + Sbjct: 44 PDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLG- 102 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV----TNEQIQKR 150 L L ++ + E HSR Y I + ++ + V + I+ + Sbjct: 103 GLSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVAGTINHPAIRAK 162 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + + + E + + + +E I F Sbjct: 163 VDWLEARVRECASVPEK------------------------------FILMILIEGIFFA 192 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 SFA L+ + LI+RDEA+H T + ++ N G P Sbjct: 193 ASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPPP-------- 244 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI--LCQYVEYITNIRMQAVGLDLPFQT 328 Y LF QA + E + S I + + YV + + + + + F Sbjct: 245 DRVYGLFRQAVEIEIGFIRSQAPTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSA 304 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDS 364 P L+S + E +SY ++ Sbjct: 305 PP-PDASFPLSLMSTDKHTNFFECRSTSYAGAVVND 339 >UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_AQUAE Length = 696 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 112/279 (40%), Gaps = 30/279 (10%) Query: 3 YTTFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ-LSFFWRPEEVDVSRDR 60 F+ + + K + G P N+ ++ KY L + + FW PEE+ + DR Sbjct: 12 KLIFNPQGDREASKRKIIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDR 71 Query: 61 IDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIH 119 Y+ L ++EK + L + LDS Q +I+ PE+E + F E++H Sbjct: 72 KQYETVLSDYEKRAYELVLSFLIALDSFQVDMLKE-FGRMITAPEVEMAITAQEFQESVH 130 Query: 120 SRSYTHIIRNIVND--PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 + SY I+ ++V+ +++ +E++ +R + I+ Y+E I + Sbjct: 131 AYSYQFILESVVDPVKADEIYNYWREDERLLERNKVIAELYNEFIRKPN----------- 179 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIAR 237 ++ + LE++ FY FA + + M + I+ I R Sbjct: 180 -------------EENFIKATIGNYILESLYFYSGFAFFYTLGRQGKMRNTVQQIKYINR 226 Query: 238 DEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 DE + GT+ + + ++ + E ++ Sbjct: 227 DELCFIEGTEVLTKRGFVDFRELREDDLVAQYDIETGEI 265 Score = 93.3 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 H+T ++++N LR + E ++ + F A +E W Y+ ++ ++G Sbjct: 575 NCHVTLFRNIINTLRKENPE----LFTPEIEKWIVEYFKYAVNEEIKWGQYVTQN-QILG 629 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 +N ++ +Y++Y+ N+R+ +G D + NP+ WI+ + +N + + + +Y Sbjct: 630 INDVLIERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYS 689 Query: 359 VGQ 361 Sbjct: 690 KAN 692 >UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VB17_NAEGR Length = 330 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 111/350 (31%), Gaps = 52/350 (14%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSF-FWRPEEVD--VSRDR 60 SQ K + E + P + +Y ++ +K+L+ W E+ D + D Sbjct: 3 ELHSQLKQLEKSEEILSENPHRFTLF-PIQYPKLWEIYKKRLASSIWSVEQFDQIIRNDI 61 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + + L + Q + A I I E + + + IH Sbjct: 62 SKLSEICNSDHSFIKIILAFLVAN-CKQKTNLWGAFKD-IQILEAKHFHGFRLAMKNIHY 119 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Y ++ + + K+++ + + Sbjct: 120 EMYCNLFEILTEETERSELIEKMINSTMKKSQYTKKWLNS-------------------- 159 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 L+ + +E I SF F +R LM LI RDE Sbjct: 160 ----------DNLFSERLIGLVCIEQIFLSASFFSIFWLKKRGLMSALTISNDLIFRDEE 209 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 H + + L+ ++ + + L +A EK++ L +I L Sbjct: 210 FHSNFLYSLYSNLKH----------SKLPQTLVHSLVKEAVDIEKEFITSL--PTELIEL 257 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQ 350 +++ + QYVE +++ + + G + F T N WI L++ + Sbjct: 258 DRNSMYQYVEVVSDNILISFGYEKLFHTE-NQCSWIQDMLMN---KSGFF 303 >UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib beta subunit n=7 Tax=Lactobacillus RepID=Q040X9_LACGA Length = 320 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 101/342 (29%), Gaps = 43/342 (12%) Query: 13 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKH 72 M + ++ + + + + P V + DR ++ LP+ E+ Sbjct: 2 TSGRKMNKKSYYKTSNWNAVEDQVDRSAWARLNDIVYEPRRVPIHEDRDEFSHLPKTEQT 61 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 + + + L ++Q + + E + E+I++++Y H + Sbjct: 62 MLLHSFGSLALSSTLQMKVSLSKIKQDAENSEEAAVYNALQYLESINNKAYGHALTEFST 121 Query: 133 D---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRE 189 F+ N +QK+ +++ Y + Sbjct: 122 SNEQRDEAFNWANQNPYLQKKMRLLNTVYQSDNAIQKKA--------------------- 160 Query: 190 LKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHM 249 + + ++ SF + + A++I+ R L+ T Sbjct: 161 ----------AHVFISTGLYHSSFFGPLYLFGQHKLPRTAELIKYALRITTLNGIYTGIK 210 Query: 250 LNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYV 309 E I + YDL + E + L+ D + D + Y+ Sbjct: 211 FRRDFFNLSKEEQKNIHK----WVYDLCDRLYANELNHIHLLYEDTGLE----DKVEHYI 262 Query: 310 EYITNIRMQAVGLDLPFQTRSNPI-PWINTWLVSDNVQVAPQ 350 Y N + +G + + + P + T L+ + Sbjct: 263 HYTLNKALMNLGQEPKYPENVETLDPTLTTGLMESAMIEDFF 304 >UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Marseillevirus RepID=D2XAR5_9VIRU Length = 280 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 104/306 (33%), Gaps = 44/306 (14%) Query: 60 RIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI--PELETWVETWAFSET 117 D+ L + EK L + D I + +S E+E + A +E Sbjct: 1 MSDWSKLTKGEKKFVKLELAFFAQFDGIVVENLVRNFQQEVSSYAKEIEWFYILQAANEL 60 Query: 118 IHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEG 174 IH+ +Y ++I N++ P D I I+ A + + D I + Sbjct: 61 IHNETYMNLIDNLLPSPKKREKALDAISNYPSIRLIANWVERWMDRRIPLPE-------- 112 Query: 175 THTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRL 234 +++ ALE + F SFA F ++G K Sbjct: 113 ----------------------RIIAFAALEGVIFTGSFAAIHYFTITNRLKGLRKANEW 150 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 I++DEALH + + + + ++ ++ A + Sbjct: 151 ISKDEALHQRFAEAVYRYIV-----DVIKAFPRVSQERVQEILGSAIDAVSPFIHDCL-R 204 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEV 354 + ++ + + Y++ + ++G + F + S+ + ++ + + + E V Sbjct: 205 FKNVNIDAERMIGYMKNAADGLAFSLGYEKFFNSDSS-LDYMLLIGMDN--KTNFFEEVV 261 Query: 355 SSYLVG 360 + Y G Sbjct: 262 ADYAKG 267 >UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M646_CANTT Length = 252 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 5/157 (3%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-AL 66 + K + +EP+ + KY +K + FW EEVD+S+D D+ L Sbjct: 82 KLKQLEAEEPLLQENKRRYVMF-PIKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWNNKL 140 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 ++E++ L + D I G + + PE +++ E IHS Y+ + Sbjct: 141 NDNERYFVSRVLAFFAASDGIVGENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLL 200 Query: 127 IRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDE 160 I V DP +F+ I I K+AE + + Sbjct: 201 IETYVKDPQEADFLFNAIENIPCITKKAEWAIKWIQD 237 >UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomycetales RepID=RIR2H_RHOSR Length = 324 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 107/354 (30%), Gaps = 42/354 (11%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 +T + + F +D +L K + FW P ++D SRD D+ Sbjct: 2 STLTPGRPYAPGRQGFSSLRAGGLNWDAFP----LRLFTKGNAKFWNPTDLDFSRDAEDW 57 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPE--LETWVETWAFSETIHSR 121 + L ++ + + + + + E ++ + F E H++ Sbjct: 58 EGLNSEQQRNSTYLVAQFIAGEEAVTEDIQPFMKAMAAEGRFGDEMYLTQFCFEEAKHTQ 117 Query: 122 SYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 + + + + + + + +Y+EL Sbjct: 118 VFRLWMDAVGLTRDL-------HPFVAENPYYRQLFYEEL----------------PGSL 154 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFA-ERELMEGNAKIIRLIARDEA 240 V + ++ + + +E + R ++ G +++R I DE Sbjct: 155 KVLETDPSPVNQVRASVTYNHVIEGSLALTGYYAWQKVCTTRGILPGMQELVRRIGDDER 214 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 H+ R A D + +E E L + W + F + GL Sbjct: 215 RHMAWGT--FTCRRHVAADDSNWGVVQERMAELMPLALGMID----WVNKQF-EVQPYGL 267 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEV 354 + ++ Y + + +G R P+ I+ + ++ E + Sbjct: 268 DDQE---FIAYAADRAQRRLG--AIESARGRPVEEIDLDYSPEALEEKFGEEDA 316 >UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain n=9 Tax=Lactobacillus RepID=D0R5X4_LACJF Length = 313 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 105/336 (31%), Gaps = 42/336 (12%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 M ++ + + + + P V + +D+ ++ LP++E+ + + + Sbjct: 1 MNKRPYYKANNWNTVEEQVDHSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHS 60 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV--NDPS 135 TL ++Q + + E + E+I++++Y++++ Sbjct: 61 FGSLTLSSTLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQE 120 Query: 136 VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLY 195 ++ N +QK+ + +++ Y + Sbjct: 121 DAYEWANQNPYLQKKMKFLNTVYQSGNAIQKKA--------------------------- 153 Query: 196 LCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRS 255 + L ++ SF + + A++I+ R L+ T Sbjct: 154 ----AHVFLSTGLYHSSFFGPLYLFGQHKLPRTAELIKYALRITTLNGIYTGIKFRRDFF 209 Query: 256 GADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNI 315 E ++ YDL E L+++ + D + Y+ Y N Sbjct: 210 KLSKKEQNKVH----DWVYDLCDNLYDNELSHIKLLYQNTDLE----DKVEHYIHYTLNK 261 Query: 316 RMQAVGLDLPFQTRSNPI-PWINTWLVSDNVQVAPQ 350 + +G + + + P + T L+ + Sbjct: 262 ALMNLGQEPKYPENVETLDPILTTGLMESAMIKDFF 297 >UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomycetales RepID=RIR2H_MYCTA Length = 314 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 104/328 (31%), Gaps = 41/328 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 + KL + FW P ++D +RDR D++ L + E+ Sbjct: 12 GGLNWASLP----LKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAG 67 Query: 85 DSIQGRSPNVAL--LPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV 142 + + + E ++ +AF E H++ + + + + Sbjct: 68 EEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDL------ 121 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 + + +Y EL E + ++ + + Sbjct: 122 -HRYLDDLPAYRQIFYAELPE----------------CLNALSADPSPAAQVRASVTYNH 164 Query: 203 ALEAIRFYVSFACSFAFA-ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 +E + + ER ++ G +++R I DE H+ R A D Sbjct: 165 IVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDA 222 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 + E E L ++ E+ +A L+ D L+KD +++Y T+ M+ G Sbjct: 223 NWTVFETRMNELIPLALRLI--EEGFA--LYGDQPPFDLSKDD---FLQYSTDKGMRRFG 275 Query: 322 LDLPFQTRSNPIPWINTWLVSDNVQVAP 349 R P+ I+ ++ Sbjct: 276 --TISNARGRPVAEIDVDYSPAQLEDTF 301 >UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepID=C8WQL9_ALIAD Length = 317 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 96/294 (32%), Gaps = 35/294 (11%) Query: 38 EKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 +L K W P ++D ++D+ D+Q + E E+ + + + + Sbjct: 25 MRLYHKAKKLGTWDPRDIDFTKDKEDWQGMNEAERRVILRLCSLFVAGEEAVTLDLLPLI 84 Query: 97 LPLISI--PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGI 154 + + E E ++ T+ F E H+ + + + + S + + + Sbjct: 85 MAVAREGRLEEEMYLTTFLFEEAKHTEVFRRFLDEVAGETSDL--------SVFHKDHYR 136 Query: 155 SSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFA 214 +Y+ L + V + + + +E + + Sbjct: 137 KIFYEYLPQ----------------AMGRLVHDPSPEAQAEASVTYNMVVEGVLAETGYY 180 Query: 215 CSF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD------DPEMAEIAE 267 + A + + G + IRL+ RDE+ H+ ++L+ L S + + + Sbjct: 181 AFYTALQKENKLPGLIQAIRLLQRDESRHIGYGTYLLSRLISENAHIWDVVNRRINLLLP 240 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSM-IGLNKDILCQYVEYITNIRMQAV 320 DL + +E + GLN D Y + R+ + Sbjct: 241 HAIGVVQDLNAELDTEEAQKLAEELGITDVPFGLNPDEFVAYAQKQFATRLGVL 294 >UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain n=21 Tax=root RepID=RIR2_SHV21 Length = 305 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 117/337 (34%), Gaps = 54/337 (16%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 F +L ++ W P +V + D L E + + + + + + + L Sbjct: 16 FLELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINI-EDL 74 Query: 97 LPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND-PSVVFD---DIVTNEQIQKRAE 152 L ++ + E IH + Y +I+ + + + V+ DI+ + +Q++ Sbjct: 75 LSQFDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKLR 134 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 ++ E + L +E I F S Sbjct: 135 WLNGRVTEASDKAEKILL------------------------------FLLVEGIFFISS 164 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 F F R +M G IARDE LH + + N + ++ P + Sbjct: 165 FFSIGLFRVRGIMNGICLANDYIARDEMLHTSAAALLYNTMTKSSERPS--------EDW 216 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF---QTR 329 Y LF +A + E + + + +N + Q+++ + ++++ L+ + Sbjct: 217 IYKLFREAVEVEFKFI--AAKGYGVSLVNVHEIRQFLQATADRILESINLNPIYGSLPPE 274 Query: 330 SNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 + P+ + S V E + S Y G + +++ Sbjct: 275 NCPLAY-----TSSTKSVNFFERDNSDYT-GTLTNDL 305 >UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain n=3 Tax=Thermus RepID=Q745Z4_THET2 Length = 324 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 105/344 (30%), Gaps = 35/344 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQ 88 Y +Y + + +W E D D+ E E+ + L ++ Sbjct: 10 YRPYEYPELLRFRDAIRHSYWVHTEFSFQSDLQDHALADEKERSLVERALLAIAQVELAV 69 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + + PE+ T+A SE H+ +Y H Sbjct: 70 -KLFWARVYDRFPKPEIAEVGLTFAESEVRHANAYAH----------------------- 105 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 + + + L + + ++L++ + E + Sbjct: 106 --LLELLGLEEAFGQALEGASALRDRAQALGEALRRAQGKDLREYALALFLFSAFTEHVS 163 Query: 209 FYVSFACSFAFAERE-LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + F A R +G + I +++E +H +L LLR+ + + E Sbjct: 164 LFSQFYVLMALNRRGNRYKGISNAIEATSKEENVHGLFGVELLRLLRTEHPE----ALGE 219 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 ++E L + E+ D+LF G + ++++ N + GL PF Sbjct: 220 GFQEEALRLAQGLFRAEEALLDWLFSAGEPALVGHRETLEFLKGRYNQVLALHGLPPPFP 279 Query: 328 TRSNPI---PWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 + W L++D +V +Y + + Sbjct: 280 VDEKALRDTEWFTLELLAD-KEVDFFNKRSVAYARRVQSFDPEE 322 >UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomycetales RepID=RIR2H_MYCA1 Length = 311 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 104/328 (31%), Gaps = 42/328 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 +D KL + FW P ++D SRDR D++ L + E+ Sbjct: 12 GGLNWDSLP----LKLFAGGNAKFWNPADIDFSRDRADWERLTDDERSYATRLCAEFIAG 67 Query: 85 DSIQGRSPNVALLPLISIPEL--ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV 142 + + + + + L E ++ +AF E H + + + + + Sbjct: 68 EESVTQDIQPFMAAMRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGVTDDL------ 121 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 + + + +Y+EL + ++ + + Sbjct: 122 -HHFLDDVPSYRTIFYEELPD----------------CLNALTIDPSPAAQVRASVTYNH 164 Query: 203 ALEAIRFYVSFACSFAFA-ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 +E + + ER ++ G +++R I DE H+ R A D Sbjct: 165 MVEGMLALTGYFGWHKICVERGILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDA 222 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 + E E L ++ E+ +A Y + + +++ Y ++ M+ G Sbjct: 223 NWGVFETRMNELMPLGLRLI--EEGFALYDPMPFDL------SVDEFMAYASDKGMRRFG 274 Query: 322 LDLPFQTRSNPIPWINTWLVSDNVQVAP 349 R P+ I+ ++ Sbjct: 275 --TIASARGRPLAEIDLDYTPVQLEDTF 300 >UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae RepID=A5UUQ7_ROSS1 Length = 297 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 85/294 (28%), Gaps = 39/294 (13%) Query: 33 KYDIFEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRS 91 + + +L EK W P ++D S+D D+Q L E+ + + + Sbjct: 15 RDTVPMRLFEKAKRLGVWNPSDIDFSQDVRDWQTLTADERDLVLRLTSLFQAGEEAVTLD 74 Query: 92 PNVALLPLISI--PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 149 + + + E E ++ ++ + E H+ + + + Sbjct: 75 LLPLVATIAAEGRIEEELFLTSFLWEEAKHTDFFNRFLTEVTG----------------- 117 Query: 150 RAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRF 209 +L + + + + L +E + Sbjct: 118 -------VTGDLSHYHTSNYRALIHEALPAAMGRLRDDPSPEAQAIASLTYNMIVEGVLA 170 Query: 210 YVSF-ACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 + A R+LM G K I L+ +DE+ H+ ++L+ L + Sbjct: 171 ETGYHAYFTMLERRDLMPGTRKGIGLLKQDESRHIAYGVYLLSRLINAEPR--------- 221 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSM--IGLNKDILCQYVEYITNIRMQAV 320 + + D F + GL+ D + R+ + Sbjct: 222 LWDVIVERMNELVVYAMGVIDDAFACYEVVPFGLSHDDFMHFAMGQFQRRLDRI 275 >UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1H3S0_VITVI Length = 269 Score = 151 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 67/181 (37%), Gaps = 15/181 (8%) Query: 187 LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGT 246 L++ +E I F SF F ++ LM G LI+R E LH Sbjct: 91 PLCSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFA 150 Query: 247 QHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILC 306 + +LL+ Q+ + + +A + E + ++IG+ ++ Sbjct: 151 CLLYSLLQKQLP-----------WQKVHHIVHEAMEIETQFICEALP-CALIGMKATLMS 198 Query: 307 QYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 Y++++ + + A+G + + NP W+ + + + Y I S + Sbjct: 199 HYIKFVVDRLLVALGYERKYNVE-NPFDWMEF--IFLQGNANFFQRRMGDYQKASIMSSL 255 Query: 367 D 367 D Sbjct: 256 D 256 >UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative n=10 Tax=Plasmodium RepID=B3L3V1_PLAKH Length = 335 Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 121/366 (33%), Gaps = 52/366 (14%) Query: 11 NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 + Q + + + KY F ++ S FW E+ + +D+ +++ ++ Sbjct: 14 DAQNNDDILKENQFRWVMF-PIKYKTFWSYYKEVESLFWTAEDYNFDKDKKFLESIDKNM 72 Query: 71 KHIFISNLKYQTLLDSIQGRS---PNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + + +L D +L +I IPE + E IH Y I Sbjct: 73 LVKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIF 132 Query: 128 RNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 + D + + ++ + + K+ + ++ ++ I + L+ NG Sbjct: 133 ETYIPDAKQKRTIINKVIQLDSVLKKQKWLTELFETNIPFYNKLVLIYISKVLFNGTLNI 192 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 + E ++ + I RDE LH Sbjct: 193 L------------------------------IGYCKENSILPCLCNVHEKIHRDEYLHGD 222 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 + N L + + D F A + E +A + D S++ + K+ Sbjct: 223 FSVMCCNHLNNKLK-----------YERLLDYFKMAVKLEYQFAIEML-DLSVLKIKKEQ 270 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPIPW--INTWLVSDNVQVAPQEVEVSSYLVGQI 362 + ++EY+ + + + F ++ P W N +VS+N + + Y QI Sbjct: 271 VKSFLEYLADTMLVNLKHPKYFNSKY-PFTWPEFNKIVVSENQKTESVKKAEDIYGERQI 329 Query: 363 DSEVDT 368 + D Sbjct: 330 VLDEDF 335 >UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae RepID=C9RTF8_GEOSY Length = 302 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 83/288 (28%), Gaps = 28/288 (9%) Query: 37 FEKLIEKQLSFF-WRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 KL EK W P ++D S+D+ D+ L EK + + + + Sbjct: 20 MYKLYEKAKRNGKWNPADIDFSQDKEDFARLTSEEKIAALPLVAGFSAGEEAVTLDILPM 79 Query: 96 LLPLISI--PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEG 153 L E ++ T+ E H ++ + + + + Sbjct: 80 AHALARQGRLEDVMFLTTFMHDEAKHVEMFSRWQQEVGIGAMDL--------SVFHNDHY 131 Query: 154 ISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSF 213 +Y+ L E + + + + +E + Sbjct: 132 KRIFYEALPE----------------AMNRLYTDDSPEAVIRAATVYNMIVEGTLAESGY 175 Query: 214 ACSFAFAER-ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 ++ L G + I + DE H+ + + L + + I + Sbjct: 176 YTFRQIYKKAGLFPGLLQGIDYLNMDEGRHIQFGLYTIQRLVNENERYYDLFIQYMDELW 235 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 + + A E + ++ D+L YV NIR + + Sbjct: 236 PHVVGYVAYLTELGKRQQQLARTYALEIDYDMLNNYVVKQFNIRKKQI 283 >UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Brugia malayi RepID=A8PTX7_BRUMA Length = 288 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 1/133 (0%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 T + + + E + P + K+ +K L+ FW +EVD+S+D D+ Sbjct: 34 TATTTVRYESNGEILLAENPNRFVIF-PIKFHDIWDFYKKALASFWTVDEVDLSKDYRDW 92 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + L + E+H L + D I + + +PE + E IHS Y Sbjct: 93 ENLNDGERHFISRVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENIHSEMY 152 Query: 124 THIIRNIVNDPSV 136 + +I + D Sbjct: 153 SKMIDTYIRDQKQ 165 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 28/232 (12%), Positives = 72/232 (31%), Gaps = 19/232 (8%) Query: 150 RAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRF 209 + I +Y + + + + + + R ++ + + + Sbjct: 62 KFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISRVLAFFAASDGIVNENL 121 Query: 210 YVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA------ 263 F+ E G +I E +H M++ + Sbjct: 122 VNRFSQEVQVPEARFFYGFQIMI------ENIHSEMYSKMIDTYIRDQKQKKFRKFCVTL 175 Query: 264 ---EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 EI ++ +F ++++ +IG+N ++CQY+EY+ + + + Sbjct: 176 CFLEINLSNYKKFTSMFNACIDAKQEYLTEALP-VDLIGINCKLMCQYIEYVADHLLTEL 234 Query: 321 GLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + + NP ++ + + E VS Y + S + + Sbjct: 235 HCAKIYHSD-NPFDFMERISI--EAKTNFFEKRVSEYQKAGVLSSEEGKSFN 283 >UniRef50_D2S309 Ribonucleotide reductase beta subunit-like protein n=3 Tax=Halobacteriaceae RepID=D2S309_9EURY Length = 302 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 85/288 (29%), Gaps = 28/288 (9%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 + + W P E+D+ DR LP+ +L + L Sbjct: 20 HRYYRNAVEKHWDPHEIDLEADREGATDLPDPAFEGLKQSLALFGAGEESVTEDLAP-LA 78 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ E + ++ T + E+ H+ + R +++ +++ +K + Sbjct: 79 VVLEDIEDQLFITTQLYEESKHTDFFDRYWREVIHAEEERRGQELSSPADEK---WFNEP 135 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 YDEL E + T + L +E I + Sbjct: 136 YDELFERNERAMVQLLEEDTPKNRAKAHCHYHLT------------IEGILAQTGYYGLT 183 Query: 218 AFAEREL-----MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 + + G + ++L+ DE H+ L L ++ + E Sbjct: 184 LAYGEQEPDLPDLPGLVEGLKLVRSDEGRHVGFGMAQLKSLVIDG--EVDPDVLRDTVDE 241 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 L + E +G G + L +Y RM+ + Sbjct: 242 LVPLVQDSLAGE---GGASTEEGP--GPSPSDLAEYAYTKHEQRMRQI 284 >UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0R0_9EURY Length = 296 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 91/292 (31%), Gaps = 24/292 (8%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSP 92 ++ +L+ + + W P +DV D+ L E L + Sbjct: 25 EHPK--RLVRSAIEYHWDPAAIDVRADQEAVSELSRVEFTRLRGLLAQFGAGERAVTTDL 82 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L ++ + + ++ T + E H+ + + ++ I T + Sbjct: 83 AP-LAVVLDGSDEQRYIATQLYDEARHTELFDRYWKRVIRPEEESRGLIPTEPMADR--- 138 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 Y EL + TS T + L + L + +E Y Sbjct: 139 WSHDDYRELFDRTSNAMARLLERDTSETRARAFCHYHLTVEGILAQTAYRWVETR--YSG 196 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 + G R + RDE H++ + L DPE Sbjct: 197 -----ELEAVPELPGLVNGFRYLRRDEGRHVSFGVTKVRKLVDKGVDPET---------- 241 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 + + + D + RDGS+ G +++ + ++ + R++ VG+ Sbjct: 242 IVETIDELVPLVETTIDQMVRDGSI-GADRNGILNRIDTARDRRLEQVGVVP 292 >UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS Length = 369 Score = 141 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 40/372 (10%), Positives = 105/372 (28%), Gaps = 35/372 (9%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 + S + ++ + + + + Y + + +W E + D Sbjct: 13 KSALSLPRLEEDLPEYNNSETLVLKIWPP-TYAPSWHYYQLHQANYWSATEHEPLEDVSG 71 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 + L + + + + D + + L + + ETIH Sbjct: 72 FIKLDSQWQKAVLHSFAILAIGDDAVMQFIDENDLEWEECTQW--MFKDQGARETIHKIV 129 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 Y ++ A+ S + ++ Y + + + + Sbjct: 130 YNKML---------------------HLADHSSEFTTSMLTSKKYINYILHNNSDLKLQK 168 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 + +KK L+ + E F F E + +I + +DE +H Sbjct: 169 YKLEDEVMKK--AAFLIKMIFCERYLFATPFLVINLMGESGFLNNCVRINMQVMKDEHVH 226 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 + L+ +D +E + +D+ + + ++ + + K Sbjct: 227 YLHAVQLFRDLKPKSDQ------IDEINKLFFDMAQEFVEIVENMIMKI--GAGLESKYK 278 Query: 303 DILCQYVEYITNIRMQAVGLD-LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 + + + G+D P+I + + E + Y + Sbjct: 279 QGFLDHSRFTLHTIYSDCGIDVPQSLAEYTTTPFIVFDKNTGADKFNLMESNSTVYKAVR 338 Query: 362 IDSEVDTDDLSN 373 D ++L + Sbjct: 339 AQYVPDWNNLQD 350 >UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus RepID=C3MUE4_SULIM Length = 308 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 102/323 (31%), Gaps = 48/323 (14%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 ++ K F + KL + FW P +D+S+D D++ L + EK Sbjct: 6 EEYKHEYFKSIKSGGLNWSLFP----MKLYQLGKKLFWDPANIDLSKDAEDWKKLNDLEK 61 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIP--ELETWVETWAFSETIHSRSYTHIIRN 129 I+ + + ++ L+ E ++E + + E+ H ++ Sbjct: 62 MFIINVGSKFAAGEEAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAFRRFFDA 121 Query: 130 IVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRE 189 + + + +S Y ++ Sbjct: 122 VNVMED-----------LSTYTKDLSPNYKKIF-----------YEELPKAMWNLSRDPS 159 Query: 190 LKKKLYLCLMSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQH 248 + ++ + +E + + R+++ G AK++ LIA DE+ H+ + Sbjct: 160 PENQVRAVVTYNLIVEGVAAEGGYNIFRQITNTRKILPGLAKMVNLIATDESRHIAFGIY 219 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSM-------IGLN 301 ++ L +E + Y + +A +F + +M L Sbjct: 220 LITRLV------------KEYGEGVYKAAMDHINYLAPYAIGIFSEPTMPQVESLPFNLT 267 Query: 302 KDILCQYVEYITNIRMQAVGLDL 324 L Y + + N R+ A+ Sbjct: 268 NIELVDYAKKLLNTRIDAINRAK 290 >UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=Cryptosporidium RepID=A3FPS5_CRYPV Length = 339 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 102/340 (30%), Gaps = 26/340 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + Q E + P + KY L +K FW E + D+ + Sbjct: 7 ELLEQQKNESILLDNPFRWVLF-PIKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMD 65 Query: 68 EHEKHIFISNLKYQTLLDS--IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 E + +D+ + LL + +PE + E I Y Sbjct: 66 EKLLDYIEMAFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENI----YKE 121 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAE------GISSYYDELIEMTSYWHLLGEGTHTVN 179 + N V + I ++++K+ E Y+ +E + Sbjct: 122 LFMNYVEMIRKNKEKIERTDEVEKKDENNLNSKISKEEYEYNLEKKLNELEDFTKMKELV 181 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 G +K +Y ++ +I +E EL + I RDE Sbjct: 182 GNFYDEDTLFSEKLIYYVIIKKIFSSSIHLLRLSFSMRNISESELPTQLCDGLDRIRRDE 241 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 + + +++ + + +L QA EK++ + ++ Sbjct: 242 QYQVEFCLSIAKSMKTKPSN-----------DQVVNLLEQAIMLEKNFIFSIVDP-QVLQ 289 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTW 339 + ++ + ++ + + + + F SNP I Sbjct: 290 IEREDIVAFLLFNADEILVDLKYPRQFNV-SNPFINIMND 328 >UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theileria RepID=Q4UJ43_THEAN Length = 332 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 128/372 (34%), Gaps = 49/372 (13%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + YT+ + +ND E + + ++D F L ++ + FW E+ + D Sbjct: 6 LPYTSILKVQND---EILLKENHNRWVMF-PIEHDTFWILYKEVENNFWAAEDFIFTDDI 61 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDS---IQGRSPNVALLPLISIPELETWVETWAFSET 117 LP+ + ++ L + LD+ + + LL + I E + E Sbjct: 62 KLLYQLPKPIFNTLLNLLSFHINLDNKLICRPVDITLDLLSEVQIAEARAFYGFQLTDEN 121 Query: 118 IHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 IH+ + + + +F+ + + +SSY + Sbjct: 122 IHTETISSMF--------QLFNQQLDTNIVSSNTLFLSSYGMD--------------KII 159 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF-AFAERELMEGNAKIIRLIA 236 + K+ L L +M + FY S + +L+ I Sbjct: 160 WLYNECENNKCFFKRVLLLVIMK------LLFYCSINILRDYLLKEKLLPTFITAFDSIT 213 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 D +H LL++ + + E ++ QA + E + + Sbjct: 214 NDRIIHTRFAHCTFRLLQN-----------KMLESEVLEIIKQALKLEYQFI-LQYFTIQ 261 Query: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 L+ +++ Y+E+I N + G + + + I W+N ++ N+Q +++ + Sbjct: 262 FFNLSTNVIKSYLEWIGNNILLVCGYKTLYTSEFD-IDWLNHPIIDLNIQKQTNKIQKHN 320 Query: 357 YLVGQIDSEVDT 368 + I + D Sbjct: 321 ENLNDIKFDEDF 332 >UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Corynebacterium phage P1201 RepID=A7IYE3_9CAUD Length = 237 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 92/265 (34%), Gaps = 34/265 (12%) Query: 109 VETWAFSETIHSRSYTHIIRNIV--NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTS 166 ++ F E +H++SY+ + + D F + N+ Q + YD Sbjct: 1 MKQIGFMEEVHAKSYSSVFSTLFGSEDIDGAFAWVENNKATQVKKLVFDEAYDISDYNDR 60 Query: 167 YWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELME 226 G S LE+ FY F FA + + Sbjct: 61 RVEYYGAIIR----------------------ASSVLLESFLFYTGFYLPLHFASQGKLT 98 Query: 227 GNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKD 286 A +IRLI RDE +H + + + + K+ +L + E Sbjct: 99 NTADLIRLIMRDEGVHGYYLGYKFQ----KVMEGALPYERDAVKERVTNLACRLFVNEIP 154 Query: 287 WADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR-SNPIPWINTWLVSDNV 345 + ++ +GL+ + ++ Y N MQ +GL+ F + P I + L D+ Sbjct: 155 LIEEIY---EPLGLSAQ-VQTFLRYNLNKAMQNLGLENVFPAEMTRVEPRILSQLSVDSE 210 Query: 346 QV-APQEVEVSSYLVGQIDSEVDTD 369 + SSY++GQ + D D Sbjct: 211 ETHDFFSGSGSSYVIGQAEETTDDD 235 >UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C317CA Length = 306 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 85/286 (29%), Gaps = 23/286 (8%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 +L W +++D ++D++D+ E E+ + L + + L+ Sbjct: 38 ELYSLWERQHWAVQDLDFTQDKLDWHERFDEEERFARMYGLSAFFIGEQRVAAELGP-LM 96 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ ++ T E H + + D++ E ++++ S + Sbjct: 97 RAAPQEDMRLFLCTQIADEARHVAFFDRFYSEV---------DVLGVEGLEEKLAATSEH 147 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSF-ACS 216 + + L +L+ + + +E + Sbjct: 148 LNPEFGVLFDEMLKSRVDRLATE------PEDLETLVEAITIYHMVIEGMLALTGQHFII 201 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 + G + +ARDE H+ L + DP + E + Sbjct: 202 DYNEREGTLPGFVEGFINVARDEHRHVAFGARFLRDMAR--SDPRHVAAIQRTLGEIAPV 259 Query: 277 FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + WA D + G++ + RM+ +GL Sbjct: 260 AEGVLKP--KWAPDD-DDFEIFGISVTETRAFAFRALERRMKVIGL 302 >UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n=2 Tax=Streptococcaceae RepID=A4VCA2_9LACT Length = 317 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 97/326 (29%), Gaps = 41/326 (12%) Query: 23 PVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQT 82 ++ + + + E+ S FW + + D ++ L E+ L T Sbjct: 7 YYRAINWNIVEDEFDNAVWERATSLFWLDTRIPIENDFTNWIKLNLEEQGQLKCLLILLT 66 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP--SVVFDD 140 L + Q + + + F E +++++Y I+ + F+ Sbjct: 67 NLSTNQSIEVGEIVRNGKCSQQEVAILNNIQFIEMVNTKAYNRILLTFDKEINLEKSFEW 126 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 + + ++ + I++ Y E L Sbjct: 127 VDNDSRVLEYLNDINTVYRE-------------------------------SSLIKKRFI 155 Query: 201 VNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 +E + Y + F + ++ +I R+E+LH H + LL +D Sbjct: 156 ALCVEGLLNYAYLSHLFELWINKEFNNLGTMLEMIIRNESLHCFYFSHKVKLLLKESDPK 215 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 E E K Y+ + + D + +K I + N + + Sbjct: 216 E----VERFKAWSYETVNHFVKLGLNIIDDFYYLKE----SKKIAKNLILQEANNILMGI 267 Query: 321 GLDLPFQTRSNPIPWINTWLVSDNVQ 346 GL F + IN L + Sbjct: 268 GLKEQFGFNDEVLKGINYRLNNLRRH 293 >UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WK83_ACTMD Length = 320 Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 36/325 (11%), Positives = 94/325 (28%), Gaps = 31/325 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-AL 66 + + + + + ++ D +K + L ++ + W ++D S+D +D++ + Sbjct: 13 EQSSLEELKDVNIDDMIDYVHKDLKKLPEYIDLYKRYFTHRWNAYDLDFSQDAVDWRTKM 72 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 + E+ F + + L E + ++ T E H+ + Sbjct: 73 TDVERKAFTEIAAAFHHAERQVEVEL-PIFM-LTGSEEAKMYLCTQLEDEARHTLFFDRF 130 Query: 127 IRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVS 186 R +V P + + G + + V Sbjct: 131 YREVVGLPGDS----------------VEELLASSFPHVPETFVGAFGLLSYLADDLRVD 174 Query: 187 LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTG 245 K++ +E + + + + + G RDEA H+ Sbjct: 175 PENPAKRVRYATAYFMWIEGVLALTIMKLTLTYCRTKGYLPGYYTGFIASCRDEARHVQF 234 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 L E ++ + + + +G +++ + Sbjct: 235 GMRFLRDSVQEDPR---------LLHEIHETLRT--ELAMNGGASVPAPLEPLGFSEEEV 283 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRS 330 ++ N ++ VG+ LP + Sbjct: 284 VHFMIRQVNNKLSDVGISLPPDIQE 308 >UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, beta subunit 2 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IMN4_NATPD Length = 306 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 79/295 (26%), Gaps = 36/295 (12%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQAL------PEHEKHIFISNLKYQTLLDSIQGRS 91 + + W P ++++ DR + +A PE S + + Sbjct: 18 MRYYRNAVERHWDPHDIELDTDRENLKAFLDSTDTPETYLDGLRSGVARFGAGEQAVTED 77 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 L + + + +V T + E H+ + R +++ + Sbjct: 78 LAP-LATALGSIDDQMFVTTQIYEEAKHTDFFDRYWREVIHPVEDALGL---DPSSPTDE 133 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 + Y+EL + T L +E I Sbjct: 134 TWFNDAYEELFDRNEEAMERLLAAPTAEQFAKAYCHYHL------------VIEGILAQT 181 Query: 212 SFACSFA------FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 + + E + G I +DE H+ L L ++ Sbjct: 182 GYYGMQQSYSADSYPELPHLPGLCDGFTKIRQDEGRHVGFGMAKLKALVGDGK--VDPQL 239 Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 ++ E L D D F D +G+ + L + RM+ + Sbjct: 240 LDDIVGELLPLVDDIT---TDVGDESFDD---VGIPPEELEAFAAEKHTERMEQI 288 >UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyostelium discoideum RepID=Q54E77_DICDI Length = 257 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 92/244 (37%), Gaps = 43/244 (17%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARY------DQQKYDIFEKLIEKQLSFFWRPEEVDV 56 T + K L +F + +A++ ++ K+ +K L+ W EE++ Sbjct: 47 KHTITDNKIYILINSIFKDNNLKMAQFIFKNFENEISPLDIWKMYKKTLANQWVVEEIES 106 Query: 57 SRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFS 115 S D +D++ L E+ F + L + I ++ + + IPE + + Sbjct: 107 SDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-NRFMSKVQIPEAKCFYNYQIHI 165 Query: 116 ETIHSRSYTHIIRNIVND---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLG 172 + +HS +Y+ +I + D +F+ I T ++K+AE + +E E Sbjct: 166 KYLHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKAEWALKWINESFE--------- 216 Query: 173 EGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKII 232 L+++ A E+I F SF +R LM+G Sbjct: 217 -----------------------KRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSN 253 Query: 233 RLIA 236 LI Sbjct: 254 ELIN 257 >UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subunit, putative n=1 Tax=Babesia bovis RepID=A7AR36_BABBO Length = 329 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 95/309 (30%), Gaps = 54/309 (17%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 +Q E + + YD + ++ + FW E+ + +R Y +LP + Sbjct: 17 EQHNETLLKENANRWVMF-PIHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELR 75 Query: 72 HIFISNLKYQTLLD-SIQGR--SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 + + + Y LD S R + + LL IPE + E IHS + + Sbjct: 76 QLVVKLISYHNRLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIMSS 135 Query: 129 NIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 I + + E ++ + + V L+ Sbjct: 136 AIPGTID--------VPEADAKIEWLTRNLTST-----------------SCFYIKVILQ 170 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 + K ++ I + + + +A+D ++HL Sbjct: 171 CISKAIFRSAF------GILA-------DYLRNSKKLPTLLSALDTVAKDVSIHLKFAMA 217 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 L L+ ++ +L A E + + M GL++ L QY Sbjct: 218 ALEHLKLRPT-----------RETVMELLNSAYDLEMAYCRSVLPMDHM-GLSEYHLSQY 265 Query: 309 VEYITNIRM 317 ++ N + Sbjct: 266 IKNNVNQCL 274 >UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC3_9VIRU Length = 400 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 38/271 (14%) Query: 16 EPMFFGQPVNVAR---YDQQ-KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE- 70 E + + Y K+ L K S FW E D S DR ++ + E Sbjct: 34 EDILDPDNLKHRNQTLYPPARKFKDTYDLWLKHQSCFWSVHENDPSVDRDRFETMTPKEF 93 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 + I + + + DSI L ++ EL+ E IH + Y++++ Sbjct: 94 QEILLCTVGCIAIGDSIVLDRIANGLKERVTSIELKAMFSDQEAREFIHKKMYSNMLD-- 151 Query: 131 VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 V++ R+E + Y ++E + + +G Sbjct: 152 -----------VSHRANYYRSEEFKNEYMSVLETLADKYDIGYVQVQ------------- 187 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 + + E I F F A + + L+ RDE +H + Sbjct: 188 -------MFFIMMCEIILFTPMFQTICYAACKGYCPKLCDLNLLVMRDEYIHYENARLQS 240 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAA 281 ++ D + E + LF + Sbjct: 241 FKFKTKLDRKFARTVLAEFSELTLQLFAKII 271 >UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus RepID=Q91ES7_GVCP Length = 362 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 82/352 (23%), Gaps = 38/352 (10%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 + + Y + + W E D + + ++ + + + Sbjct: 34 NRLKIWPP-TYTPSWNYLVEHQINHWYANEHKPMDDLNGFDKIDSAWQNALLQSFAVLAI 92 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 D + + + + A ET H Y ++ Sbjct: 93 GDDKVMDLISNSDIEWEEST--KWMFADQAARETTHKIVYNRMLELAC------------ 138 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 +S Y + + ++ + K L+L M Sbjct: 139 ----------VSRSYTVNTLTSGDFSHYIMDCRVLDEFQLPERNEVNDKVLFLSTM--IL 186 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-EM 262 E F F E + KI + +DE +H +L L+ G + E+ Sbjct: 187 CERYLFAAPFLIINLMGESGFINKCVKINMQVMKDEHVHYKHAVQLLMDLKRGVTNEVEI 246 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 E+ L L + + + + + + Sbjct: 247 NELFRGLSGAFMVLVESMV---MKICIDLTYQQKI------SVLHHTRFTLRDIFVTLQI 297 Query: 323 DLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSN 373 + P + P+ + E + Y D L Sbjct: 298 EPPPAVVQYTITPFKVFDKNCGEDKFNLMESTSTVYNASNSIYYPAWDVLDE 349 >UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=D1VPU5_9ACTO Length = 396 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 78/316 (24%), Gaps = 72/316 (22%) Query: 35 DIFEKLIEKQLSFFWRP-EEVDVSRDRI------------------DYQALPEHEKHIFI 75 + L +K W +D S D + + + E+ Sbjct: 35 ERLLALYQKGKDKQWDAGTRIDWSLDVPYGRPLGLPDESVALFGTPVWDKMNDRERDEVR 94 Query: 76 SNLK---YQTLLDSIQGRSPNV-ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 +L + L QG ++ + + + + T E H Y + Sbjct: 95 RHLASWQFSQFLHGEQGAMICSARIVESVPDLDAKFYATTQTIDEARHVEVYARFLHE-- 152 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 L + K + Sbjct: 153 -------------------------------------KLGLVYPINDHLKALLDQTLSDS 175 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 + L +E +F + +++ + +DEA H+ + L Sbjct: 176 RWDIPYLGMQVLIEG-LALAAFGVLRDLTP---LPLPKQVLAYVMQDEARHVAFGRLALR 231 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL--NKDILCQYV 309 D E AE E + CY L + + WA L D + + Sbjct: 232 DYYRQLSDAERAEREEFAAEGCY-LMYERINGSEVWATLGLDIAESTELVKRSDYMRMFQ 290 Query: 310 EYITNIR---MQAVGL 322 + + M+ +GL Sbjct: 291 TLLFSRIVPCMRDIGL 306 >UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S8_SULAC Length = 330 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 88/290 (30%), Gaps = 34/290 (11%) Query: 5 TFSQTKNDQLKEPMF---FGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 S+ N + + F V ++ +L E F W E+D S+DR Sbjct: 2 INSEYGNTTKEGKILHNKFKSTVEGLDWNTFP----MRLFEIGEKFRWTAYELDFSKDRE 57 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV--ALLPLISIPELETWVETWAFSETIH 119 D++ L ++ Y + R + + + E ++ +A E H Sbjct: 58 DWKKLKPSDRTQNKIISSYFLAGEECVARDILPLANAMEELGLIEEALYLTQFARDEANH 117 Query: 120 SRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 + ++ ++ + + K +Y+ Sbjct: 118 TVAFRKWFESVGETEGI-------YDFTYKNEPYRRLFYE----------------IIPT 154 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER--ELMEGNAKIIRLIAR 237 + + + + E I + E+ + G K+++LI R Sbjct: 155 DMRRLYNDPSPENIVRAVVSYNFVAEGILAETGYYGYVKGYEKILPALPGLYKMVKLITR 214 Query: 238 DEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDW 287 DEA H++ ++ L+ S D + E Q ++ + + Sbjct: 215 DEARHISFGAYVAALMISMHGDSVLNEFNRYFGQLTQEIGFPLIEANRKI 264 >UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S5_SULAC Length = 345 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 111/342 (32%), Gaps = 50/342 (14%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVD--VSRDRIDYQALPEHEKHIFISNLKYQT 82 ++ Y +L K FW P + + +D+ D++ + E E+ I + Sbjct: 23 KGIDWN--SYP--MRLWAKSNELFWSPLQFKELIQQDKQDWETMSESEREISEYIATAFS 78 Query: 83 LLDSIQGRSPNVALL--PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDD 140 + R ++ + E ++ + ET H+ ++ + +I D Sbjct: 79 AGEEAVSRYLAELVIALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDSIGMDKDT---- 134 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 +K I+ Y EL + G + L Sbjct: 135 -------EKWTTEINPSYYELFYVALPSAAYGVKA-----------NPSPESILRFTATY 176 Query: 201 VNALEAIRFYVSFACSFAFAEREL-MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + ++E I F ER ++G +I++ +A DE+ HL ++ +L Sbjct: 177 MFSIEGIAAETGFYFWRTMWERGRHLKGIYEIVKRVAADESRHLAFGTYLTTMLIGEDQS 236 Query: 260 PEMAEIAEECKQE--CYDLFVQAAQQEKD-----------WADYLFRD---GSMIGLNKD 303 + L +Q+ + + ++++++ GS++ Sbjct: 237 LYDKFLEYFNYAGGLAVRLIGTIVEQQVNKWEPYKEKWGRYFEWVYKENGLGSLVDYAAK 296 Query: 304 ILCQYVEYITNIRMQAVGLDLP-FQTRSNPIPWINTWLVSDN 344 ++ + Y+ R++ + + + P I + + Sbjct: 297 MVQHRLFYV--NRLRNANREKLRYMPLNEAAPVIENFDTVEK 336 >UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH Length = 231 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 2/108 (1%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHI 73 +EP+ P + +Y ++ +K + FW EEVD+S+D D++ L E+H Sbjct: 6 EEPILTPTPDRFCMF-PIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHF 64 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 L + D I + + + + I E + E IHS Sbjct: 65 IKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE 112 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 72/228 (31%), Gaps = 32/228 (14%) Query: 154 ISSYYDELIEMTSYWHLLGEGTHTVNGKTVT-VSLRELKKKLYLCLMSVNALEAIRFYVS 212 I Y + + + + R K + + + + Sbjct: 27 IWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAASDGIVLENLSTR 86 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 F +E G I E +H E+ + + Sbjct: 87 FMSDVQISEARAFYGFQIAI------ENIHS-----------------EILLRTKFDEDR 123 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNP 332 + A + E+++ +++G+N++++ QY+E++ + + A+G + NP Sbjct: 124 LKAIVCDAVEIEREFVCDALS-CALVGMNRELMSQYIEFVADRLLAALGCGKVYGVT-NP 181 Query: 333 IPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD----TDDLSNFQL 376 W+ L+S + E V Y + S V +D F+L Sbjct: 182 FDWME--LISLQGKTNFFEKRVGEYQKASVMSSVHGNAAFNDDHVFKL 227 >UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like protein n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZF52_NATMA Length = 309 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 98/312 (31%), Gaps = 38/312 (12%) Query: 31 QQKY---DIFEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 Y + +L K W P++ D+++DR D++ E E+H F++ + Sbjct: 2 PIDYSNREKSYELYRKGKREGTWDPDDYDLTQDREDWEQFSEAEQHRFLATCSGFYDGEE 61 Query: 87 IQGRSPNVALLPL---------ISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV 137 R+ ++ L + E ++ + E H+ ++ + + Sbjct: 62 DVTRTLAPYMMALDALPNDELPFDTVQEEMYLAQQVYEEAKHTDLFSRYFEEVFGTQNTA 121 Query: 138 FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 ++ + + D+L+ + + + E + Sbjct: 122 PYREGGYQEQGYSTDDLYDTADDLLAAVNSGDRTELVYSLGEAYLNYMGIVEAQLARGGY 181 Query: 198 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 L +E + ++E + I + +DE H+ + ++ L Sbjct: 182 LSFDQMIE--------LKATQMGRDSVLESFQQAIGKVRQDETRHIENGRWVMKQLAIAE 233 Query: 258 DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY--------V 309 D + Y+ ++ + + +D L+ D G + D + + Sbjct: 234 PD---------IVADVYEPRMEEYVENRLLSDPLYDDQPFEGYDPDRIGHQLVQYLQDTI 284 Query: 310 EYITNIRMQAVG 321 +YI R G Sbjct: 285 DYIGAERFDQYG 296 >UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Geobacillus kaustophilus RepID=Q5QL41_GEOKA Length = 292 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 93/280 (33%), Gaps = 30/280 (10%) Query: 37 FEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 KL + + F W P+E+D+S D+ ++ L E + I + Sbjct: 32 AWKLYQMAIRFGTWNPQEIDLSEDKKHFKQLDEQRRAYLIHFCTGFWNAEENVALKFCPW 91 Query: 96 LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGIS 155 ++ + E + ++ T E H+ + ++ V + ++ + +RA + Sbjct: 92 IM-IAPSIEQQAFLSTQLVDEFKHTEFFIRYFAEVLQTDREVKVLNLVHDTLDERARQLL 150 Query: 156 SYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 S D+ E L G +E I+ V + Sbjct: 151 SVLDKGPEEREIAMLEGLVH------------------------YQGVIEGIQAMVGYEV 186 Query: 216 SFAFAER-ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECY 274 A + L G + + I RDE H+ L +++ + +P A+ +E +E Sbjct: 187 FEAVYGQYGLFPGLKEGFKQIKRDEGRHVGYG---LRMMKYLSKNPSYAKRIKELFEEFL 243 Query: 275 DLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 + QE + + + + + Y + + Sbjct: 244 PKILVRYDQEIVVNGKRYDIPAEVNGKERLTRMYQRRLKD 283 >UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, beta subunit 3 n=2 Tax=Halobacteriaceae RepID=Q3INJ5_NATPD Length = 316 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 87/284 (30%), Gaps = 20/284 (7%) Query: 40 LIEKQLSFFWRP-EEVD---VSRDRI---DYQALPEHEKHIFISNLKYQTLLDSIQGRSP 92 + + W P E+++ + +DR D E E + L + Sbjct: 22 YFKHAVYNHWDPYEDIEKALIEQDRKRLIDADEFGETEFEDLMRTLALFGAGEEAVTEDL 81 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L+ ++ + +V + + E H++ + R +++ + Q+ Sbjct: 82 AP-LMLVVDDINDQMFVSSQIYEEAKHTQFFDRYWREVIHPVADARGFERRAPTDQR--- 137 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 Y +L + T + + +++ I +S Sbjct: 138 FFVDGYVDLFDRTEAAMERLLEPGEDTPTNRVRAYCHYHLTV-ESVLAQTGYWGIVSSMS 196 Query: 213 FACSFAFAEREL--MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 S A E + +EG K I I DE H+ + + D + E Sbjct: 197 PRGSEALREDGMPHLEGLVKGISFIRSDEGRHVGFGMQKVQSHLAE--DGVDESVVRETL 254 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 QE L + D + ++ + L + +E IT+ Sbjct: 255 QELLPLVAETVSA----TDEVTDPEPLVEYASEKLTRRIEVITD 294 >UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Tortoise herpesvirus RepID=Q4VWF1_9HERP Length = 215 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 72/236 (30%), Gaps = 35/236 (14%) Query: 35 DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 + L + W +E + D D+ L + + + D + Sbjct: 11 EDLNILRNLAIKNRWAEDEFMYTDDIKDFSRLDPEALDFYRFIFTFLSAADDKVNINL-D 69 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV----FDDIVTNEQIQKR 150 L L ++ + T E +HSR+Y + + N+ + V++ I+ + Sbjct: 70 QLKQLFPQKDVHHYYATQEDIECVHSRTYAGVQLALFNNDDDARRRYIEANVSHPTIETK 129 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + +++ E + + L + +E I F Sbjct: 130 FDWLNTKIMENESVPEKYLL------------------------------MILVEGIFFV 159 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 SFA + LI+RDEA+H + + N + P I Sbjct: 160 ASFASIAYLRNHGGFNSVCRSNDLISRDEAIHTQASCCIFNNYLKDHEMPTDERIR 215 >UniRef50_Q2J7V6 Putative uncharacterized protein n=1 Tax=Frankia sp. CcI3 RepID=Q2J7V6_FRASC Length = 372 Score = 116 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 86/322 (26%), Gaps = 73/322 (22%) Query: 35 DIFEKLIEKQLSFFWRPE-EVDVSRDRI------------------DYQALPEHEKHIFI 75 + L + W E ++D S D ++ LPE E+ Sbjct: 32 EQMLNLYSRGKQRQWDAETQLDWSHDVDPDNPLGLPDEFIWIAGTRVWERLPEAERTTVR 91 Query: 76 SNLKYQ---TLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 ++ L QG A ++ + + + T E H +Y +++ + Sbjct: 92 QHIAGWLYSQFLHGEQGGLVCSAKVVQAVPDIASKFYAATQVMDEARHVEAYQRMLQAKI 151 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 + + + ++ Sbjct: 152 K---------------------------------------VHYPISTGLRGLLEAIIGDS 172 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELM--EGNAKIIRLIARDEALHLTGTQHM 249 + L +E +F+ +R+ M + + +DEA H+ + Sbjct: 173 RWDITYLGMQVMIEG-LALAAFSI-----QRDRMRDPLAQALNAYVLQDEARHVAFGRLA 226 Query: 250 LNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI--LCQ 307 L S E+ E + + C+ L + +E W + I L + Sbjct: 227 LRDYYSQLSTAELREREDFAVEACWVLKDRFVGEEM-WRKLDYGAEECIALANRSPAQRE 285 Query: 308 YVEYITNIRMQAVGLDLPFQTR 329 + + + + F R Sbjct: 286 FRRRVFTRIVPTLKDINLFGPR 307 >UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318F2 Length = 419 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 67/239 (28%), Gaps = 22/239 (9%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 L + WR E+D + D + + E+ + N + + + + Sbjct: 14 DLYARWERGNWRATEIDFTADSEQWQERFDAFERRAALWNYSLFFHGEDAVADNLSPYI- 72 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 + E + ++ T E H+ + + + +G + Sbjct: 73 DAAPLEEQKYFLTTQQVDEARHAVFFKRFMHEVC-----------------DVGDGTMAG 115 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 I+ W R K + +EA Sbjct: 116 GLAAIQPDLTWGFRRVFDRLDTMADELRRDRSKPKLAAALALYHLIVEATLAQSGQHFIT 175 Query: 218 -AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYD 275 +R+++ G +R + DE H+ +L L+ DPE E E +E Sbjct: 176 GYLEQRDVLPGFYGGMRNVEFDEQRHIGFGVKLLYDLQRE--DPECKEAVAELLREVLP 232 >UniRef50_C7Q987 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q987_CATAD Length = 430 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 91/350 (26%), Gaps = 75/350 (21%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPE-EVDVSR- 58 M TT + D G V A YD +L W + +D SR Sbjct: 1 MTVTTPTPADTDWTAP--LGGTAVLAADYDT-HDQQLLRLYALGKQRQWNSDSRLDWSRP 57 Query: 59 -DRID----------------YQALPEHEKHIFISNLKYQTLLDSIQGRSP----NVALL 97 D + + LP E + + + G + Sbjct: 58 VDPDNPLGMPDSFVWIAGSDLWDKLPTAEHSVLRRHAAAWASSQLLHGEQFSLVAVSKIA 117 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 + + + T E H+ ++ Sbjct: 118 QTAPEADAKLFAATQIMDEARHTEVINRLLTE---------------------------- 149 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 + T + ++ ++ + + + L LE + + A Sbjct: 150 -----------KIGLRYGLTGSLASLFENVVQDARWDFCALGVQVVLENL----ALATLT 194 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 +R + + +DEA H+ + ML E+ E + + C+ L Sbjct: 195 VQRDRTTEPLIRSLTTYVMQDEARHVAFGRIMLRRTYRDLTSAELREREDFVVESCWSL- 253 Query: 278 VQAAQQEKDWADYLFRDGSMIGLNKDI--LCQYVEYITNIR---MQAVGL 322 + E W + I + + L QY + ++ +GL Sbjct: 254 REGFVGEAIWNTLDYGAQECIAIARTSPALRQYRRRLFMRIVPALRDIGL 303 >UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXC9_CATAD Length = 353 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 63/216 (29%), Gaps = 23/216 (10%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 L + S W +D++RDR + L + +S L + +S R+ AL Sbjct: 50 DLYNRWESRQWSVAGLDLARDRRRFAELRPFARREILSALAELEIGESCVTRTL-SALAD 108 Query: 99 LISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYY 158 ++ T E H R + + A + Sbjct: 109 HAPDEADRLYLCTQMADEARHVRFFQSYLS--------------------DVAGIAAEQL 148 Query: 159 DELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL--EAIRFYVSFACS 216 + M + T V R ++++ + L E + Sbjct: 149 EPHGAMGGESGFGVVYDPLLTRHTAAVRTRPDDRRVWHVAVVSYHLLAEGLLAVAGLRAL 208 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 A A+ + ++ + + RDEA H+T Sbjct: 209 RALAKSCELTALSEGLANVVRDEARHVTFGLAATRR 244 >UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187E616 Length = 184 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 2/114 (1%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + + +EP+ + +Y ++ +K + FW EE+D+S+D Sbjct: 72 LRKQFVGDIELPESEEPLLKESKRRFVLF-PIQYPEIWQMYKKAEASFWTAEEMDLSKDL 130 Query: 61 IDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWA 113 D+ + ++E+H L + D I + + E + Sbjct: 131 HDWNNRMNDNERHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQI 184 >UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Lactobacillus fermentum RepID=B2GEC7_LACF3 Length = 306 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 95/325 (29%), Gaps = 45/325 (13%) Query: 23 PVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQT 82 +D+Q+ + + K + FW V ++ D+ + AL ++ L + Sbjct: 5 YYKAINWDEQEDQVDQATWLKLTNNFWLDTRVPITDDQPSWHALTAQQQAQVGHALAGRA 64 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV 142 LL + Q +L + E + F E++H+++ T I R + + Sbjct: 65 LLSAFQSELGAPSLRAGRRTQQEEAVLNLITFMESVHTKAVTTIFRRLTD---------- 114 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 +E W + + L L++ Sbjct: 115 ----------------EETTAAYYAWADGQAPLQAALTDLTKGIEGDDLMRRGLFLIADT 158 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 L A + ++++ LI RD + + + Sbjct: 159 VLCAGFDWAVLTQPALAQTNQMLKNILTGN-LIFRD------YLAYKFRQGIAELPFAKQ 211 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + + + L A QQ + + G D+ V++ + + A+GL Sbjct: 212 EALVAQLTKGAQSLIKLAHQQNEALLEDA-------GAANDL----VDFQWRMLLVALGL 260 Query: 323 DLPFQTRSNPIPWINTWLVSDNVQV 347 S P+ L + + Sbjct: 261 GEQ-PAESGPVAHQIDQLANQAQET 284 >UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q16J81_AEDAE Length = 244 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 3/103 (2%) Query: 53 EVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETW 112 EVD+S+D D++ L EKH L + D + + + E + Sbjct: 142 EVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYGFQ 201 Query: 113 AFSETIHSRSYTHIIRNIVND---PSVVFDDIVTNEQIQKRAE 152 E +HS Y+ +I + D +F+ I ++K+AE Sbjct: 202 IAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKAE 244 >UniRef50_A4X8S2 Putative uncharacterized protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4X8S2_SALTO Length = 321 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 91/327 (27%), Gaps = 82/327 (25%) Query: 27 ARYD-QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLD 85 +D + L E+ S W+ +VD + D + LP+ S D Sbjct: 13 LNWDYEATDPRLMALYERAKSAQWKVSDVDWTVDVPFGEPLPDD------SAFAMAAFAD 66 Query: 86 S---IQGRSPNVALLPLIS--------------------------IPELETWVETWAFSE 116 S +GR+ + + T A E Sbjct: 67 SPLAARGRAAWDDFRWEFQSWMVSQFLHGEQAAMVVAARLVAAVPDLDSKFCAATQAVDE 126 Query: 117 TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTH 176 H ++ +R + +P V Sbjct: 127 ARHVEVFSRYLREKIPEPYEV--------------------------------------- 147 Query: 177 TVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 + + + + + L +EAI SF S + L++ RL+A Sbjct: 148 SPPLRELLTDILSDSRWDVTALGMQIMVEAI-AMASFRLSNSSFHDPLIKNLT---RLVA 203 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFR--D 294 RDEA H+T L L E AE E+ E L Q W + Sbjct: 204 RDEARHVTFGVLSLRGLYGQLTTAERAER-EDLVLEAASLIRQRFLLGDIWQRLEVDRAE 262 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVG 321 G + +++ Y + + + A+G Sbjct: 263 GVSFAASHELMIMYRQAVFSRVAAALG 289 >UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L226_9VIRU Length = 371 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 92/322 (28%), Gaps = 42/322 (13%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 KQ++ W PEE+ +S+D+ + PE K I L + D+I ++ + Sbjct: 72 YNFWLKQVALAWSPEEISLSKDKATFHRAPEQLKKISACMLGMLAIGDNIVLQNL-SDVS 130 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 +I+ + + E HS Y+ + + + V+ K I++ Sbjct: 131 EIITNNYVLNAISRQEDVEKTHSDFYSRSLDVLNDVGKSVY---------YKSEHFINNE 181 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 ++ + + L + E + F +F Sbjct: 182 LYDIQQFSKK---------------------HSTNNLNKIAFFIMICERLYFLPAFVTVA 220 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 A R + RDE LH +++ + E I E + Sbjct: 221 YLGITGYAPHTALGNRYVMRDENLHYNLWRNISANFEYKMNKQEALNILNEFEYILKCTI 280 Query: 278 VQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 + + DI+ + + GL ++ P + Sbjct: 281 KNIFKNYSS---------KDSKFSLDIMLDILRFAFEDFRITNGLIP-YKENKKPKTDLL 330 Query: 338 TWLVSDNVQVAPQEVEVSSYLV 359 +L + E +Y Sbjct: 331 NYLSYETD-FNLMESTSVNYKT 351 >UniRef50_B2H6U3 Conserved protein n=8 Tax=Bacteria RepID=B2H6U3_BURPS Length = 361 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 69/267 (25%), Gaps = 29/267 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 + + + + W P + D +D A +++ ++ D Sbjct: 47 LEWK-IETPKLYDIYDSARDAGWSPHTLPW--DTLDVNAFTLDQRYAIAYWFALLSVFDG 103 Query: 87 IQGRSPNVALLPLISIPE---LETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 A++ E + + E H IR + D + ++ Sbjct: 104 SGPTVFARAMIHTYESKEEDPVRKCFFSVVRDEMNHEEVCGRAIRLLTPDGPLGYEPETA 163 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 ++ + L G+ G V L L A Sbjct: 164 LGKLARNN---------------VEWLYYNGSRYWTGFNRAVDKYPLPILFTSFLFGEVA 208 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 + F+ + + + + R I +DE HL +L L D + Sbjct: 209 -SSTLFHGMY-------QNTTIPVFKEAFRRIGQDEGRHLGICLTVLQKLLPQLTDQDKE 260 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADY 290 I + + L + + D Sbjct: 261 MITIQLRAGFVFLSGILHEPPAQFWDL 287 >UniRef50_A6GD89 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GD89_9DELT Length = 384 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 36/334 (10%), Positives = 83/334 (24%), Gaps = 82/334 (24%) Query: 26 VARYD-QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA------------------- 65 + + +L + W +++ D + Sbjct: 55 HFDWSYPADFPEMAELYTRAKQGQWNGDDLPWHTDVDPFNPEVPLLPKSFLAAGDLSQEL 114 Query: 66 ---LPEHEKH-----IFISNLKYQTLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSE 116 L E+ + L + QG A + + + + + T E Sbjct: 115 GMLLSPKEQRELAYSVICWMLSQFLHGE--QGALFAAAQVTEAVQFFDGKLYGATQVMDE 172 Query: 117 TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTH 176 H +T + L Sbjct: 173 GRHIEVFTRYLDQ---------------------------------------KLGRLYQI 193 Query: 177 TVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 N + SL + L + +E +F + L+ +++R++ Sbjct: 194 NDNLFVILDSLMTDSRWDMKFLGTQIMIEG-LALGAFGVLYKVTGEPLL---RELLRMVI 249 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQ---AAQQEKDWADYLFR 293 +DEA H+ L + A + E+ E L A + ++W + Sbjct: 250 QDEARHVHYGVLALREHFTKALSERERQEREDWAFEVALLMRNRFMAYEVYEEWFEGRMS 309 Query: 294 DGSMIGL--NKDILCQYVEYITNIR---MQAVGL 322 + + + + + ++A+GL Sbjct: 310 REQWRQFITRAPGMKMFRQVMFSRLVPNLRAIGL 343 >UniRef50_B4R8K9 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Proteobacteria RepID=B4R8K9_PHEZH Length = 367 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 34/330 (10%), Positives = 82/330 (24%), Gaps = 70/330 (21%) Query: 16 EPMFFGQPVNVARYD-QQKYDIFEKLIEKQLSFFWRPE-EVDVS---------------- 57 +F +D + +L E F W E +VD Sbjct: 35 REIFRTPLTGSYNWDYEAANARIRRLYELGKRFNWNSELDVDWGLQMPAPEGAPPEPEGF 94 Query: 58 RDRIDYQALPEHE-----KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETW 112 D ++AL + + L + L+ + + + + Sbjct: 95 ADHPKWKALSPEQKADFMRRTTAQTLSQFLHGEQG-ALMVASQLVSCAPTHDAKLYAASQ 153 Query: 113 AFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLG 172 F E H + + + Sbjct: 154 TFDEARHVEVFHRYLMERCHMI-------------------------------------- 175 Query: 173 EGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKII 232 N K + + ++ + +E +F L++ +++ Sbjct: 176 -YPINPNLKFLLDKVLTDERWDLKFIGMQILIEG-LALAAFQTIHETTPDPLLK---QVV 230 Query: 233 RLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLF 292 L+ RDE H+ + L E+ E A+ + C + + ++ F Sbjct: 231 GLVMRDEGRHVAFGVNYLEDWIRALPQAEIEERAQFAYEACVVMKNRLISTNVA-EEFGF 289 Query: 293 RDGSMIGLNKDIL--CQYVEYITNIRMQAV 320 + +N + +++ + + Sbjct: 290 TREEALEINAKTQGGQAFRKFLFERMIPNL 319 >UniRef50_UPI0001AF6C58 hypothetical protein MkanA1_14310 n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6C58 Length = 423 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 86/321 (26%), Gaps = 78/321 (24%) Query: 33 KYDIFEKLIEKQLSFFWR-----PEEVDVSRDRIDYQALPE------------------H 69 + L + +S W P E+DV+ D D Q LP Sbjct: 82 DFAEMYDLYRRAVSKQWDGNADLPWELDVTPDNPDAQILPRSFVPFKEIEGFGVRLTALE 141 Query: 70 EK----HIFISNLKYQTLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSETIHSRSYT 124 E+ I L + QG A + + + + + T E H + Sbjct: 142 ERNLTWDIAAWLLSQFMHGE--QGALFASAQVTECVHWTDAKLYGATQVMDEGRHLEVFL 199 Query: 125 HIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 + + E I + D L + G Sbjct: 200 RYLDT--------------------KLEKIYTVNDNLFVLIDELMTDG------------ 227 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 + + L +E +F F L++ ++++++ +DEA H+ Sbjct: 228 -------RWDFKFLGMQIMIEG-LALGAFTTIFQQTREPLLK---QLLKMVIQDEARHVH 276 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAA---QQEKDWADYLFRDGSMIG-- 299 L + + E+ E L + ++W + Sbjct: 277 YGVLALRDHITQNISEKERREREDWVYEVALLMRNRFLMHEVYEEWFSHKVPLKVWDQQM 336 Query: 300 LNKDILCQYVEYITNIRMQAV 320 L+ + ++ + + + Sbjct: 337 LDSPSMVKFRSIMFERLIPNL 357 >UniRef50_B2HNZ6 Putative uncharacterized protein n=7 Tax=Bacteria RepID=B2HNZ6_MYCMM Length = 366 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 34/315 (10%), Positives = 83/315 (26%), Gaps = 71/315 (22%) Query: 36 IFEKLIEKQLSFFWRPE-EVDVSRDR------------------IDYQALPEHEKHIFIS 76 L +K W + +D +D + A E + Sbjct: 36 RLLSLYQKGKDKQWDAQSRIDWGQDVDPMNAIALPDEFHPLFGSPMWNAADEARRSEMRQ 95 Query: 77 NLK---YQTLLDSIQGRSP-NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 + + + L QG ++ ++ + + + T E H +++ ++ Sbjct: 96 HFQAWQFSQFLHGEQGAMVCAAKIVEVVPDLDAKFYAATQTMDEARHVEAFSRFLQE--- 152 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 + + + + Sbjct: 153 ------------------------------------KIGLVYPINKHLTALLDDTLRDSR 176 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L +E +F A E + +++ + +DEA H+ + L Sbjct: 177 WDMPYLGMQVLIEG-LALAAFGVLRDMAAPESL--AKQVLAYVMQDEARHVAFGRISLKD 233 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL--NKDILCQYVE 310 S + E E E CY L + E+ + + ++ Q+ Sbjct: 234 YYSALTEAEREEREEFVVDACY-LMRDRFRGEEVFETLGMDVKACAEWVDTSPLMIQFRS 292 Query: 311 YITNI---RMQAVGL 322 ++ + ++ +GL Sbjct: 293 HLFSRIVPIVKDIGL 307 >UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacteria RepID=D2B211_STRRD Length = 371 Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 29/274 (10%), Positives = 71/274 (25%), Gaps = 66/274 (24%) Query: 35 DIFEKLIEKQLSFFWR-PEEVDVSRDR------------------IDYQALPEHEKHIFI 75 D L +K W + +D + + + ++ Sbjct: 35 DRMLALYQKGKDKQWDSVKRIDWGLEVDPYNVLGIPDNTIAIHGTPLWDRMDARQRQEVR 94 Query: 76 SNLK---YQTLLDSIQGRSPNV-ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 + + L QG ++ + + + + T E H+ +Y ++ Sbjct: 95 LHGAAWQFSQFLHGEQGAMICSARIVESVPDLDSKFYAATQTMDEARHAETYARFLQE-- 152 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 + + K + + Sbjct: 153 -------------------------------------KVGLAYPINEHLKALLDNTLSDS 175 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 + L +E +F + L + +I+ + +DEA H+ + L Sbjct: 176 RWDMPYLGMQVLIEG-LALAAFGVMRDITTKPLPK---QILAYVMQDEARHVAFGRMALR 231 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEK 285 S + E+ E + + CY + + +E Sbjct: 232 DYYSQLTETELREREDFVIEGCYLMRDRLRGRET 265 >UniRef50_A9G4H5 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G4H5_SORC5 Length = 413 Score = 98.7 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 36/332 (10%), Positives = 78/332 (23%), Gaps = 77/332 (23%) Query: 33 KYDIFEKLIEKQLSFFWRP-EEVDVSRDR--------------------IDYQALPEHEK 71 +L + W ++D SR + L E E+ Sbjct: 99 DDPDMARLYHLAKTSQWDAATDLDWSRSVDWLDPAMPLLPDGWMPPSKLPAWGRLSERER 158 Query: 72 HI-----FISNLKYQTLLDSIQGRSPN-VALLPLISIPELETWVETWAFSETIHSRSYTH 125 L + QG + + + + + T E H + Sbjct: 159 ATQRHGLLSWMLSQFLHGE--QGALFAASQITECVPSLDAKLYGSTQVADEGRHVEVF-- 214 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 + + ++ E + D L + G Sbjct: 215 ------------------HAYLTQKLEKLYEINDNLYVVIDAIMSDG------------- 243 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + L +E +F L++ ++R + DEA H+ Sbjct: 244 ------RWDMKFLGMQIMIEG-LALGAFGSIRQVTSEPLLK---DVLRSVITDEARHVHY 293 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQ---AAQQEKDWADYLFRDGSMIG--L 300 L+ D E+ + L A + ++ + + L Sbjct: 294 GVLALSRFYREGIDERARREREDWAFDLSVLLRNRFLAHEFYDEFYAHRMTRCAWDELML 353 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNP 332 D++ + + + + R P Sbjct: 354 QSDLMGFFRRTMFRRIVPNLKRIGLLSARMRP 385 >UniRef50_Q47J53 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q47J53_DECAR Length = 342 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 82/269 (30%), Gaps = 32/269 (11%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 ++ K +++ E L W PE++ D +D + E+ ++ D+ Sbjct: 26 LSWNS-KTKKLQEVWEASLRENWDPEKLPW--DTLDVDSYTWEERESIAYWWSLLSVFDA 82 Query: 87 IQGRSPNVALLPLISIPE---LETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 AL+ + E + + E H I ++ P + + T Sbjct: 83 SAPPVFAEALIKTYEVHEEDPVRKCFFSVTRDEQNHEIMCGLAITKMLGHPDPITYEPKT 142 Query: 144 N--EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 + ++QK + + G+ G V +L LM Sbjct: 143 DLGRRLQKNVKWL----------------YFNGSRYWTGYKQAVPKYDLAVLFSSFLMGE 186 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 I F F + + + + + I RDE H+ ++ G + Sbjct: 187 -----IAAATIFKQMFDNSREAVFK---EGFKNIGRDEGRHMAICMAVMERDYPGLKEET 238 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADY 290 A + ++ + L + ++ D Sbjct: 239 KAIVTKQIRAGYLFLSAVLFEPPMEFWDL 267 >UniRef50_D0LTN7 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTN7_HALO1 Length = 408 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 39/332 (11%), Positives = 81/332 (24%), Gaps = 78/332 (23%) Query: 26 VARYD-QQKYDIFEKLIEKQLSFFWR-----PEEVDVSRD-----------------RID 62 + +L + W P ++DV + Sbjct: 71 HFNWSYPSDNGEMAELYARAKQGQWDGDSYLPWDIDVDPENPERAIIPEQFFAFELLAEF 130 Query: 63 YQALPEHEKHIFISNLKYQ---TLLDSIQGR-SPNVALLPLISIPELETWVETWAFSETI 118 L E E+ + ++ L QG + + + + + T E Sbjct: 131 GVRLSERERRQLLHSMAAWMLSQFLHGEQGALMAAAQVTEAVQFFDGKLYGSTQVVDEGR 190 Query: 119 HSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 H + + L Sbjct: 191 HVEVFHRYLDT---------------------------------------KLEKLYQIND 211 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 N + +L E + L +E +F + L++ +++R++ +D Sbjct: 212 NLFVIIDALMEDSRWDMKFLGMQIMVEG-LALGAFGVLYQNTREPLLK---ELLRMVIQD 267 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQ---AAQQEKDWADYLFRDG 295 EA H+ L A E+ E L A + ++W + F Sbjct: 268 EARHVHYGVLALREHFREALSERERIEREDWAFEVALLMRNRFMAYEVYEEWFEGSFSRD 327 Query: 296 SM--IGLNKDILCQYVEYITNIR---MQAVGL 322 Q+ + N ++ +GL Sbjct: 328 QWRRFVAASPGFEQFRHVMFNRLVPNLREIGL 359 >UniRef50_B4EPX9 Putative uncharacterized protein n=30 Tax=Burkholderia RepID=B4EPX9_BURCJ Length = 327 Score = 91.0 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 70/297 (23%), Gaps = 75/297 (25%) Query: 37 FEKLIEKQLSFFWR-PEEVDVSRDR------------------IDYQALPEHEKHIFISN 77 +L EK + W +VD D + L + +K + Sbjct: 35 LNRLYEKAKAAQWDVATDVDWRHDLDPANPLGMPDPTLLIYGTELWGKLADADKREVRHH 94 Query: 78 ---LKYQTLLDSIQGRSP-NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 +L Q L + E H +Y ++ Sbjct: 95 AQGWLLSQILHGEQAALICASKLASAENGLSARLCAAAQMMDEARHVEAYAKLV------ 148 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 L + + K + Sbjct: 149 ---------------------------------NEKLDVSYPMSRSLKGLLHDTITSSAL 175 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLL 253 L +E I F A++ ++ + I RDEA H + L + Sbjct: 176 DMTNLGMQVLVEGI-ALSIFQSVVAYSTDPFIK---DLFLRIQRDEARHFAVGRITLCRV 231 Query: 254 RSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + E+ E E + A E AD ++ +GL++ V Sbjct: 232 YAEMSSHELREREEFICEGA------AVLYEHLCADDIW---EPMGLSRRECSAMVR 279 >UniRef50_Q4J6K5 Conserved protein n=13 Tax=Sulfolobaceae RepID=Q4J6K5_SULAC Length = 342 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 80/291 (27%), Gaps = 33/291 (11%) Query: 9 TKNDQLKEPMFFGQPVNVARYD------QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 + E + F + Y+ + +L + W + +D R + Sbjct: 1 MSKENKYESINFEESPTYPEYNIYPPIWDFDNERAWQLYRRAKKEQWDEDNIDWRR-VKE 59 Query: 63 YQA-LPEHEKHIFISNLKYQTLLD--SIQGRSPNVALLPLISIPELETWVETWAFSETIH 119 + + L ++ + D + V + + T + E H Sbjct: 60 WMSGLDRKQRLAIAYWYGLLSNFDHATPVFAYAVVKSFEHHLDTAVRGILTTITWDENRH 119 Query: 120 SRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 + I+N + + F ++K+A M + + G+ Sbjct: 120 NLVCGLAIKNAMEGFPLNFKPQDD---LEKKA------------MLNVQWVWWNGSRYWK 164 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 L +M A + + + E +KI + A DE Sbjct: 165 AYLDAYKKYALDVLFTSFMMGEAAATTVF--------TSMGKNAKNEEFSKIFKNTAVDE 216 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADY 290 H T ++ ++ + ++ + L + + K++ Sbjct: 217 TRHYAFTHLIMTQNAPNMNEDRKKLVTKQIRAGFVFLSLITYKPPKEFWKL 267 >UniRef50_C5CMN9 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CMN9_VARPS Length = 302 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 62/239 (25%), Gaps = 44/239 (18%) Query: 31 QQKYDIFEKLIEKQLSFFWRP-EEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQG 89 + +Y +L + W P ++D S D LP + + ++ Sbjct: 21 KIEYPEVWRLCTQARDLAWNPIADIDYS-DLQK-ADLPPEVRKAGAEWWSLRAWMEHGAT 78 Query: 90 RSPNVALLPLI---SIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 L I E++ + + E H + I + + Sbjct: 79 PYGAERLREAIFQHQPFEVKQHITNFIAEEFRHHEASFRIADAL--------AEYEPMP- 129 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 R++ + + + +VN L Sbjct: 130 ---RSDYFKDIIPRFHDESDEKAMSFFAGLSVNTLFEQ-------------------LSG 167 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 + E + ++ RLI RDEA H+ + ++ S E I Sbjct: 168 DLLQARY-------ENARFDSIREVCRLILRDEARHIQFGRIIMRRFFSELPSEEKRLI 219 >UniRef50_A9C0R4 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C0R4_DELAS Length = 422 Score = 88.3 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 84/300 (28%), Gaps = 64/300 (21%) Query: 37 FEKLIEKQLSFFWRPE-EVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS---IQGRSP 92 L + ++ W + ++D D LP + + + Y ++ + Sbjct: 158 AADLYAQAVAAQWNADTDIDW----CDAPELPAPVEDAIVQLMTYMVENENAALLVPARF 213 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L P EL+ + E H +T IR +P Sbjct: 214 LGQLHPHYR--ELQAALAIQVADEARHIDVFTRRIRRHGREP------------------ 253 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 T G+ SL + + E Sbjct: 254 ---------------------ALSTAGGQASLKSLLDETDFSVAGFLLSVLGEGT----- 287 Query: 213 FACSFAFAERELM-EGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 F F + E +I RL ARDEA H+ L L R + ++A+ +Q Sbjct: 288 FVHLLQFLQTEAPDPLTRQICRLAARDEARHVALGMSHL-LYRLQHEPGFQHQLAQAVEQ 346 Query: 272 ECYDLFVQAAQQEKDWADYLFR-----DGSMIGLNKDILCQYVEYITNIR---MQAVGLD 323 +L + E+ + + + + Q + + + R + +G + Sbjct: 347 RFDNLAGTSGLNEEVFDALILIAAGALTPEALARGAARVQQLMRDMADGRFSKLLRLGFE 406 >UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TH71_TETNG Length = 441 Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 3/108 (2%) Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQIQK 149 + + E + E IHS Y+ +I + +PS +F+ I T ++K Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKK 293 Query: 150 RAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 +A+ ++ T T L + + LC Sbjct: 294 KADWALNWIGNQKASTVSARPTLRAAPTRRRPHSLPVLCSRRARGGLC 341 >UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=C7J3K0_ORYSJ Length = 162 Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +N D++ QY+E++ + + A+G + +NP W+ L+S + E V Y Sbjct: 83 MNGDLMSQYIEFVADRLLMALGCKKMYNV-ANPFDWME--LISLQGKTNFFEKRVGDYQK 139 Query: 360 GQIDSEVD 367 + S ++ Sbjct: 140 ASVMSSLN 147 >UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K5J6_9ALVE Length = 157 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 45/95 (47%), Gaps = 4/95 (4%) Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 ++ + K E + + A E+++ G +IG+N +++ +Y+E++ + + A Sbjct: 18 QDLRDWETLTKNEQHFIKNSAVNVEREFITDALPVG-LIGMNAELMGRYIEFVADRLLVA 76 Query: 320 VGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEV 354 +G + + +NP W+ ++S + E V Sbjct: 77 LGYAKIYNS-ANPFDWMT--MISLQGKTNFFEKRV 108 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 23/37 (62%) Query: 41 IEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 ++ + FW EE+D+ +D D++ L ++E+H ++ Sbjct: 1 YKQHEASFWTAEEIDLGQDLRDWETLTKNEQHFIKNS 37 >UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD87 Length = 104 Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 + +++ Y + + E ++ + ++R+ + + +++Y N ++ +G + Sbjct: 3 KKMLEEKMYSILYSLMENEIEYTNVIYRESGLE----KEVVNFLKYNANRALENLGFEKL 58 Query: 326 FQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + + P + L ++ + + Y G + D D + Sbjct: 59 YTVDA-INPIVLNGLSTETKTHDFFSTKGNGYQKGVYEELEDEDFI 103 >UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42088_ARATH Length = 83 Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPE 68 + + +EP+ Q + +Y ++ +K + FW EEVD+S D ++AL + Sbjct: 1 MEEGESEEPLLMAQNQRFTMF-PIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTD 59 Query: 69 HE 70 E Sbjct: 60 SE 61 >UniRef50_C7PXD9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXD9_CATAD Length = 390 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 28/235 (11%), Positives = 54/235 (22%), Gaps = 58/235 (24%) Query: 21 GQPVNVARYDQQKYDIFE---KLIEKQLSFFWRP-EEVDVSRDRIDYQALPEHEKHIFIS 76 G P+ + + + +L + + W P +D + + +P+ + + Sbjct: 107 GGPLLSVDWVDRDLVWADVAPRLYSRAAAEQWDPATAIDWAS----HADVPDEVEDAVVQ 162 Query: 77 NLKYQTLLDSIQ---GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 + Y + L P E+ E H +T Sbjct: 163 IMTYLIENEQAALMLPARLLARLHPHFR--EVMQLFAVQIADEARHVEVFTR-------- 212 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 + G G+ +L + Sbjct: 213 -------------------------------RALLSRDELGVSGAGGRASLQTLLDEPDF 241 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAERELM-EGNAKIIRLIARDEALHLTGTQ 247 + E SF F A + L+ RDEA H+ Sbjct: 242 TLASFLLSVLGEG-----SFLDLLRFLNVHAPDPITATMTSLVGRDEARHVAFGV 291 >UniRef50_C1V565 Putative uncharacterized protein n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V565_9EURY Length = 130 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 11/114 (9%), Positives = 33/114 (28%), Gaps = 4/114 (3%) Query: 56 VSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFS 115 ++ DR L + + + L + + +V + + Sbjct: 1 MAADRAAISDLGRSAFTQLRATIAMFGAGEENVTEDLVP-LAATTTNKTDQRFVASHIYE 59 Query: 116 ETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWH 169 E H+ + ++++ T+ + ++ Y+E+ T Sbjct: 60 EAKHAAFFERYWKDVIRPAEDARGLDPTDPTADR---WFTAAYEEIFNRTETAM 110 >UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=5 Tax=rosids RepID=D1II58_VITVI Length = 301 Score = 54.4 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 + +F F +R LM G LI+RDE LH + + Sbjct: 6 LFLVFNFCDIFW-KKRGLMPGLTFSNELISRDEGLHCDFACLLYKNRKPQ 54 >UniRef50_B6BHF4 Putative uncharacterized protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHF4_9PROT Length = 419 Score = 54.4 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 86/335 (25%), Gaps = 69/335 (20%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFE-----KLIEKQLSFFWRPE-EVDVSRDRI 61 + + + + KL E+ + W ++ + Sbjct: 121 PPNHGLMGRGTIIENGSIEYDFGINHKEQLWAEPVSKLYEEAKNAQWNATSDIAW-NEIP 179 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQ---GRSPNVALLPLISIPELETWVETWAFSETI 118 DY P+ E+ + Y + + P + E+ ++ + E Sbjct: 180 DYD--PKFEQ-AICQIMTYLIENEFSALYIPGKFISQMNPYYT--EIPLFLGSLMNDEAR 234 Query: 119 HSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 H +T KR + G + Sbjct: 235 HIEVFT------------------------KRVH---------------ANGGGMQYSSS 255 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELME--GNAKIIRLIA 236 + SL + + E F F E M KI++ + Sbjct: 256 VTQRSLYSLFNEDDYVKSSFLLHVMGEGT-----FIDLLKFLEE-YMPDATTKKILQYVR 309 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEEC--KQECYDLFVQAAQQEKDWADYLFRD 294 RDE+ H+ L + A K+ +L ++ + + + D Sbjct: 310 RDESRHVAYGMAHLKSVLEQNPKKINALKEAAFKRKEFMDELNGESTLLLEAMSTLVGGD 369 Query: 295 GSMIGLNK-----DILCQYVEYITNIRMQAVGLDL 324 S+ K L + ++ R+ +G+D Sbjct: 370 DSIASYKKGYEAVTELKKRMDINRVKRLVDIGIDE 404 >UniRef50_C6WBU0 Putative uncharacterized protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WBU0_ACTMD Length = 315 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/232 (10%), Positives = 57/232 (24%), Gaps = 28/232 (12%) Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 + I ++T+ + R+ + + + T E H+R + I + Sbjct: 69 RDALIQEFAFRTIAEEKVTRALGHLVAA-APNRVMTEFFSTQLLDEARHARVFRDHIIEV 127 Query: 131 VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 + V D I + +++ + + Sbjct: 128 GVPEAEVDDVITEV---------AGKAIETVLDPLEAFGVSVIRDQGD------------ 166 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 + +E + + E + A+I R DE HL+ ++ Sbjct: 167 --FYGGVITLTILVEGVLAPFGELSERKWVELD--PAGAEIERGAGMDEIRHLSVGSSVI 222 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 M + E Q L+ Q + + Sbjct: 223 KRHLQEQPGERMRVL--ELIQRGRALWEGLPMQPVLFQRESLFQQGLEEWGH 272 >UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1II57_VITVI Length = 75 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 340 +N ++ QY++++ + + A+G + + NP W+ Sbjct: 1 MNATLMSQYIKFVADHLLVAIGYERKYNVE-NPFDWMEFIS 40 >UniRef50_Q7NUN8 Probable phenylacetic acid degradation protein paaA n=1 Tax=Chromobacterium violaceum RepID=Q7NUN8_CHRVO Length = 259 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 73/271 (26%), Gaps = 54/271 (19%) Query: 51 PEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVE 110 P EV + ++P+ + I L + G + + PL + Sbjct: 22 PHEVSLET----IDSMPDEYRDTLIHQLLANGEGELSAGDTYIDSFYPLAPDADERYICA 77 Query: 111 TWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHL 170 +A E H R ++ ++ + D S + QK+AE Sbjct: 78 QFAAEEVDHFRRFSRLLAELEVDTSHMLS--------QKKAE------------------ 111 Query: 171 LGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAK 230 S+ + E + A+ Sbjct: 112 --------RRYFAAESMTTDFRSWEERAAFSFLCE----LEGHYQIKEMVSSSYLPLRAE 159 Query: 231 IIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAA--------Q 282 + ++EA H + ++ A D + A++ Y + + Sbjct: 160 A-EAVLKEEARHFSHGALLMRR---AAKDGDARARAQDALDRLYPMAMDMFGRSDSHRSD 215 Query: 283 QEKDWADYLFRDGSMIGLNKDILCQYVEYIT 313 W + +G + +D + +++ + Sbjct: 216 AAVSWGLRQYTNGQLRDRYRDDVRGHIQRLG 246 >UniRef50_Q970H5 Putative uncharacterized protein ST1620 n=1 Tax=Sulfolobus tokodaii RepID=Q970H5_SULTO Length = 212 Score = 43.6 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 63/192 (32%), Gaps = 15/192 (7%) Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 I++ + + + + + + I++ +++E + + ++ + Sbjct: 34 ILKKLSFEKAKIIANYSLQQVIEEIEHF--DFFNEYFKEDPLTTVRLPPSYIKLFDGLVE 91 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + + + + E + V + + + + I+ I DEA H++ Sbjct: 92 DFQSSRWRENIATRFHMITEGVLATVGLKILNETSRKYNLLKFNEGIKRIIEDEARHVSF 151 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 ++ E + +LF A Q K+ D + G I +++ Sbjct: 152 GLSLIED-------------KEYAVKRVEELFPLAVQIVKEGKDKIEPLGYSIQELVNLM 198 Query: 306 CQYVEYITNIRM 317 + + N + Sbjct: 199 EELKKARINKIL 210 >UniRef50_A4YGC3 Putative uncharacterized protein n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGC3_METS5 Length = 209 Score = 40.9 bits (94), Expect = 0.081, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 16/53 (30%) Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 E I ER + + I+ I DEA H+ ++ Sbjct: 105 FHLVTEGILATTGLNVLRNAGERYGLTRFTQGIKHIIEDEARHINFGLSLVTD 157 >UniRef50_B1W0E8 Putative uncharacterized protein n=4 Tax=Streptomyces RepID=B1W0E8_STRGG Length = 311 Score = 40.5 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 17/164 (10%), Positives = 47/164 (28%), Gaps = 18/164 (10%) Query: 48 FWRPEEVDVSRDRIDYQALPEHEK-HIFISNLKYQTLL----DSIQGRSPNVALLPL-IS 101 FW PE + + + + E ++ + L + I + + ++ Sbjct: 56 FWPPELLSLYG-TPLWDRMSEEQRLDLSRHEGAALASLGIWFEIILMQLLVRHVYDKPVT 114 Query: 102 IPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDEL 161 + + T E HS + +I + T + + ++ + Sbjct: 115 SNHVR-YALTEIADECRHSIMFGRMID---------WGGAPTYP-VPRVYHNLARVLKTV 163 Query: 162 IEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 + G ++ E + L + ++ +E Sbjct: 164 STTPGSFAATLLGEEVLDWMQRLTFPDERVQTLVRGVTRIHVIE 207 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.127 0.333 Lambda K H 0.267 0.0388 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,687,463,430 Number of Sequences: 3077464 Number of extensions: 54327369 Number of successful extensions: 221105 Number of sequences better than 1.0e-01: 182 Number of HSP's better than 0.1 without gapping: 446 Number of HSP's successfully gapped in prelim test: 80 Number of HSP's that attempted gapping in prelim test: 218785 Number of HSP's gapped (non-prelim): 659 length of query: 376 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 246 effective length of database: 640,326,036 effective search space: 157520204856 effective search space used: 157520204856 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 94 (40.9 bits)