BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (376 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit b... 784 0.0 UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit bet... 676 0.0 UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit bet... 615 e-174 UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 T... 341 2e-92 UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 T... 297 5e-79 UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate redu... 211 4e-53 UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase be... 145 2e-33 UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit bet... 130 6e-29 UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepI... 125 2e-27 UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain ... 121 4e-26 UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit bet... 119 3e-25 UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subuni... 115 2e-24 UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_S... 112 2e-23 UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subuni... 110 8e-23 UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subun... 109 2e-22 UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chai... 108 4e-22 UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subun... 107 5e-22 UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain ... 102 2e-20 UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 97 8e-19 UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subun... 97 9e-19 UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit bet... 96 1e-18 UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=r... 96 2e-18 UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subuni... 94 7e-18 UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit bet... 93 2e-17 UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7... 92 4e-17 UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=roo... 92 4e-17 UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subun... 91 7e-17 UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD 91 1e-16 UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subu... 90 1e-16 UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subu... 89 2e-16 UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Ba... 87 9e-16 UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit bet... 83 2e-14 UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit bet... 82 2e-14 UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Ba... 82 4e-14 UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subun... 81 5e-14 UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain ... 80 1e-13 UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=... 80 1e-13 UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subun... 79 2e-13 UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subuni... 79 3e-13 UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Pr... 76 2e-12 UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain ... 75 5e-12 UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 74 1e-11 UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclass... 72 4e-11 UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta sub... 71 5e-11 UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase sm... 70 2e-10 UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 T... 69 2e-10 UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit bet... 69 3e-10 UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subun... 69 4e-10 UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subuni... 68 4e-10 UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=S... 67 7e-10 UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subun... 67 8e-10 UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 ... 67 1e-09 UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=... 66 2e-09 UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornu... 65 4e-09 UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit bet... 65 6e-09 UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 ... 64 8e-09 UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 64 1e-08 UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprino... 62 2e-08 UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 62 3e-08 UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain... 62 3e-08 UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_... 62 3e-08 UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative... 62 5e-08 UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 60 1e-07 UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta sub... 60 2e-07 UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=ce... 60 2e-07 UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain ... 60 2e-07 UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosph... 59 3e-07 UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit bet... 59 3e-07 UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Ver... 59 4e-07 UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib be... 57 1e-06 UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 56 2e-06 UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subun... 56 3e-06 UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase sm... 55 4e-06 UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain... 54 1e-05 UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diph... 53 1e-05 UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystiviru... 52 3e-05 UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subuni... 50 1e-04 UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Dei... 45 0.003 UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=A... 45 0.005 UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain... 45 0.005 UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Coryne... 41 0.077 UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Ba... 41 0.079 UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Bru... 41 0.081 >UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit beta n=294 Tax=root RepID=RIR2_ECO57 Length = 376 Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/376 (100%), Positives = 376/376 (100%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR Sbjct: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS Sbjct: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG Sbjct: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA Sbjct: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL Sbjct: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDSEVDTDDLSNFQL Sbjct: 361 QIDSEVDTDDLSNFQL 376 >UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit beta n=58 Tax=root RepID=RIR2_HAEIN Length = 376 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/376 (85%), Positives = 346/376 (92%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQ KNDQLKEPMFFGQ VNVARYDQQKY+ FEKLIEKQLSFFWRPEEVDVS+DR Sbjct: 1 MAYTTFSQNKNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDY ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPL+SIPELETW+ETW FSETIHS Sbjct: 61 IDYAALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPS+VFDDIVTNE+I KRA+ ISSYYD+LI + + L GEGT+TV+G Sbjct: 121 RSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYGLYGEGTYTVDG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K V+LR LKK+LYLCLMSVNALEAIRFYVSFACSFAFAER LMEGNAKII+ IARDEA Sbjct: 181 KECVVTLRSLKKQLYLCLMSVNALEAIRFYVSFACSFAFAERRLMEGNAKIIKFIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQH+LN++ +G DDPEMAEIAEECKQE YDLFV AA+QEK WADYLF+DGSMIGL Sbjct: 241 LHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N+DIL QYVEYITNIRMQAVGL LPFQTRSNPIPWIN WLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDS+VDT+D +F L Sbjct: 361 QIDSKVDTNDFDDFSL 376 >UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit beta n=48 Tax=root RepID=RIR2_BUCBP Length = 376 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 275/376 (73%), Positives = 333/376 (88%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M YTTFS+ KN+QL EPMFFGQ VN++RYDQQKY+IFEKLIEKQLSFFWRPEEVD+SRD Sbjct: 1 MTYTTFSKNKNNQLYEPMFFGQSVNISRYDQQKYEIFEKLIEKQLSFFWRPEEVDLSRDY 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 ID+Q LP+HEKHIF+SNLKYQTLLDSIQGRSPN+ALLP++S+PELETW+ETW+FSETIHS Sbjct: 61 IDFQNLPQHEKHIFVSNLKYQTLLDSIQGRSPNIALLPIVSLPELETWIETWSFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNI+N PS++FDDI+ N+ I RA+ I+ YYD+LIE+TSYWHL GEG HT+NG Sbjct: 121 RSYTHIIRNIINTPSLIFDDIIDNKNIANRAKDIAKYYDDLIELTSYWHLFGEGKHTING 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K + + L ELKKKLYLCL+SVNALEAIRFYVSFACSFAFAERE MEGNAKIIRLIARDEA Sbjct: 181 KKIKIDLHELKKKLYLCLISVNALEAIRFYVSFACSFAFAEREKMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLT TQH+LN+L + ++ M++I++EC +ECY LF++ + QEK WA YLF++GSM+GL Sbjct: 241 LHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGSMLGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N++IL QY+EYITNIRM+A+GL PF+ SNPIPWIN+WL+SDNVQVAPQE+ VSSYL+G Sbjct: 301 NQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWINSWLISDNVQVAPQEISVSSYLIG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QI+SE++ D F+L Sbjct: 361 QINSEINDSDFEKFKL 376 >UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 Tax=root RepID=Q7Y4S0_BPR69 Length = 390 Score = 341 bits (875), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 183/390 (46%), Positives = 250/390 (64%), Gaps = 23/390 (5%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 T F+ + D L EPMFFG + +ARYD Q++ +FE+LIE LSFFWRPEEV++ D + Sbjct: 3 TVFNTQQVDVLNEPMFFGSGLGLARYDIQRHKVFEELIEI-LSFFWRPEEVNLMLDSAQF 61 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 LP+ ++ I +NLKYQ+LLDSIQGR+P+ L+ LIS P L+TWV TW FSETIHSRSY Sbjct: 62 NKLPQFQQDICTNNLKYQSLLDSIQGRAPSAVLMALISDPSLDTWVATWTFSETIHSRSY 121 Query: 124 THIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT- 182 THI+RN+ DPS VFD+IV +E I KRAE I YYD+++ T W E G Sbjct: 122 THIMRNLYTDPSKVFDEIVLDEAIMKRAESIGKYYDDVLVKTRNWENAKEVYECSIGSCQ 181 Query: 183 ----------VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER-ELMEGNAKI 231 + + R+L K LYLCL +NALEAIRFYVSFAC+F F + E+MEGNAKI Sbjct: 182 QNDIEMYEEIMFNAKRDLMKSLYLCLHVINALEAIRFYVSFACTFNFHKNMEIMEGNAKI 241 Query: 232 IRLIARDEALHLTGTQHMLNLLRSGADDPEMA----EIAEECKQECYDLFVQAAQQEKDW 287 ++ IARDE LHL +L+ L + MA ++ + ++ + + K+W Sbjct: 242 MKFIARDEQLHL----RVLSTLSVNFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKYKEW 297 Query: 288 ADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF--QTRSNPIPWINTWLVSDNV 345 A +LF+DG+ G+N +C +V+Y+T RM+ GL P +P PWI +L SD V Sbjct: 298 AAHLFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLNSDLV 357 Query: 346 QVAPQEVEVSSYLVGQIDSEVDTDDLSNFQ 375 Q APQEVE+SSYLV QID++VD + +++++ Sbjct: 358 QAAPQEVEISSYLVAQIDNDVDQNVINSYK 387 >UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI5_9CAUD Length = 367 Score = 297 bits (760), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 159/350 (45%), Positives = 208/350 (59%), Gaps = 12/350 (3%) Query: 19 FFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNL 78 FFG PV++ RYD + +K EK LS FWRPEEVD+++D+ DY L EK I+ SNL Sbjct: 21 FFGDPVSIQRYDIVAWPFVQKWYEKGLSQFWRPEEVDITKDKADYATLTPAEKRIYESNL 80 Query: 79 KYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVF 138 K QT+LDSIQG +P A P S PE++ V W E IHS SYTHI+RN VNDP +VF Sbjct: 81 KRQTMLDSIQGAAPFEAFGPWASTPEMQFAVLEWTRQEAIHSLSYTHILRNTVNDPGIVF 140 Query: 139 DDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCL 198 D ++ +I A IS++YD+++ + G + K+ + L Sbjct: 141 DHVLDVAEIVDCAHQISTHYDDMVRYS--------GMRMAGRAFTREDIMNAKRAFWRAL 192 Query: 199 MSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 + N LE IRFYVSFACS+AF + ++ MEGNAKIIR IARDE HL TQ +LN R Sbjct: 193 FAANTLEGIRFYVSFACSWAFTQFQKKMEGNAKIIRQIARDEQDHLILTQTLLN--RLPG 250 Query: 258 DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRM 317 DP+ I EE + E +F+ QEK WADYLF+DGSM+GLN IL V+++ RM Sbjct: 251 MDPDFEIIREELRGEMTQMFLDVGNQEKQWADYLFQDGSMLGLNAKILHHMVDWLLTHRM 310 Query: 318 QAVGLDLPFQTRSN-PIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 A+G P + R P+PWIN WL + +Q A QE E YL+G + V Sbjct: 311 GAIGHPYPGEPRKECPVPWINEWLNNKTMQYALQEAEAPDYLMGVLTGSV 360 >UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate reductase, small subunit n=2 Tax=Siphoviridae RepID=Q6QGJ3_BPT5 Length = 381 Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 119/378 (31%), Positives = 210/378 (55%), Gaps = 13/378 (3%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 TT D + +F G + +A Y + + E+L S FW E+ + D+ + Sbjct: 2 TTLLNLNWDHTNKDLFLGDSLGIADYVRVAHPELERLALLARSQFWTETEISLEADKKQW 61 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 LP + I + NL +QT DS R+P A++PL+S PELE ++ W++ E +HSR+Y Sbjct: 62 PNLPREIQEITLLNLAWQTQTDSFISRAPEAAIMPLVSRPELEGMLKQWSYFEDLHSRAY 121 Query: 124 THIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGE--GTHTVNGK 181 ++IIRN++ DP+ D + N++ R +DEL ++ Y+ + + G +T Sbjct: 122 SNIIRNVLTDPAEFIDSVTKNQEAFARIADSVELFDELYQLGQYFIAVRDHRGDNTYPET 181 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 RE + KL ++ LEA++FY SFAC+FA AE ++++G AK ++LIA+DEAL Sbjct: 182 EFPEVKRETQAKLLDAYFAIYGLEAMQFYASFACTFALAENDILQGIAKNLQLIAKDEAL 241 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H ++ ++ ++ D ++ +E + ++ + E +W ++F+ S+IGLN Sbjct: 242 HTQMSKAIIQIMFQQFDK----DLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLN 297 Query: 302 KDILCQYVEYITNIRMQAVGLD----LPFQTRSNPIPWINTWLVSDNVQVAPQEVEV-SS 356 ++L +Y+ ++ +G++ LP T+ NPIPWI WL + ++Q APQE+++ ++ Sbjct: 298 AELLEEYLYFVGRNAFMHIGVEWPSHLPVITK-NPIPWIMNWLDTTSLQPAPQEIQIGAA 356 Query: 357 YLVGQIDSEVDTDDLSNF 374 Y VGQ+ +E TD L + Sbjct: 357 YRVGQV-TETSTDTLKDL 373 >UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase beta chain n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QU02_9CAUD Length = 365 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 106/368 (28%), Positives = 178/368 (48%), Gaps = 22/368 (5%) Query: 1 MAYTTFSQTKNDQLKE--PMFFGQPVNVARYDQQK--YDIFEKLIEKQLSFFWRPEEVDV 56 M+ T F+ + L P+F GQP +A YD Y L ++Q + W +EV++ Sbjct: 1 MSSTVFNHKNDAYLTASYPLFMGQP--LAMYDSMNKIYPELFDLYKQQKAQDWSEDEVNL 58 Query: 57 SRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSE 116 RID+Q + E + I NL +Q DS R+ L P IS E V E Sbjct: 59 ENSRIDFQTAAKSEIEVCIENLLWQWEADSRVSRNIITLLAPFISNNEFAAMVTKQTEIE 118 Query: 117 TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTH 176 +H+ +Y+ I+R ++DP+ + ++ N+ + R+ I EL +LG Sbjct: 119 NLHALTYSEIVRQCISDPTEMIKRVMDNQAVLDRSSTIDDVMAEL-------EILGAKKR 171 Query: 177 TVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 + +++ L ++S+ ALE + F SFAC+FA A+R L G A++++ I Sbjct: 172 L----GYELDDEHIRQTLIKFMVSILALEGLEFIASFACTFALAQRGLFMGVAQLVQKIM 227 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG- 295 DE LH L++L DP + + CK + + + + E +WADY+F +G Sbjct: 228 LDEILHSKMDFAALDILLK---DPVWFQSYQNCKGDVQRILDEVMENESNWADYIFSEGR 284 Query: 296 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEV 354 S++GLN +L ++V Y + LD + NP+P+++ W+ D+ Q A QE + Sbjct: 285 SVVGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNIDSQQNANQEQDN 344 Query: 355 SSYLVGQI 362 S YL+ + Sbjct: 345 SQYLLNTM 352 >UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit beta n=4 Tax=Campylobacterales RepID=C3XIX4_9HELI Length = 351 Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 88/350 (25%), Positives = 170/350 (48%), Gaps = 30/350 (8%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 +F G P + ++ KY L+ + W PEEV++++D+ DY L EK + Sbjct: 31 IFGGNPTAIFELNKIKYQWAYNLLRTMFANTWFPEEVNMNQDKRDYMELTLQEKQGYDRA 90 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV 137 L +DS+Q + + P I+ PE+ + AF E++H++SY ++ +I + + Sbjct: 91 LAQLIFMDSLQTNNLTDNINPYITCPEINMLLVRQAFEESLHAQSYAVMVDSISANTDEI 150 Query: 138 FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 + +++++ + + I+ Y +L + + +L+ Sbjct: 151 YQMWRKDDKLRSKNDYIADVYTDLAKNPTETNLIK------------------------A 186 Query: 198 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 + + LE I FY FA + A M+ +A++IR I RDE HLT Q M ++ + Sbjct: 187 MFANQILEGIYFYSGFAFFYTLARSGKMQNSAEMIRFIQRDEITHLTIFQQM--IISTRK 244 Query: 258 DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRM 317 + P++ + + E ++F QA E W +Y+ + G ++GL I+ QY+EY+ + R+ Sbjct: 245 ERPDL--FTQALQDEVMEMFRQAVDLESSWGEYITQ-GQILGLTAKIIRQYIEYLADKRL 301 Query: 318 QAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 +AV + + T+ NPI W++ + +N + E +V +Y G++ E D Sbjct: 302 KAVDYPILYNTQ-NPIQWVDEQVNFNNQRTNFFEAKVRNYTRGELKFEDD 350 >UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepID=D1BPH6_VEIPT Length = 342 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 94/364 (25%), Positives = 178/364 (48%), Gaps = 38/364 (10%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 D+ + M G N+ +++ KYD ++ L+ FW PEE+ ++ D + L ++E+ Sbjct: 12 DRGTQSMIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDVKQFPYLTDYER 71 Query: 72 HIFISNLKYQTLLDSIQGRS-PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 F + + LDSIQ + PN++ I+ E+ + + AF E IH++SY++I+ + Sbjct: 72 RAFDKIIAFLNFLDSIQSENLPNLS--RYITASEVASLLNIQAFQEEIHAQSYSYILDTV 129 Query: 131 VNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 N + ++D+ T++ + +R I+ Y + S +L+ HT+ + Sbjct: 130 TNPITRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEANLI----HTIIANYI----- 180 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 LE I FY F+ + A + M + I + I RDE HL Q+ Sbjct: 181 ---------------LEGIYFYSGFSFFYTLARQGKMTATSTIFKYINRDEVTHLVLFQN 225 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 ++ LR + P++ E + + D+ Q A+ E W Y+ D ++GLN ++ +Y Sbjct: 226 IIRELRR--ERPDL--FTPELEAKITDMIRQGAENEIAWGQYI-TDDKILGLNNVLIERY 280 Query: 309 VEYITNIRMQAVGL-DLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 ++Y+ NIR++A+GL L + + NP+ WI ++ ++ + E +V++Y + D Sbjct: 281 IKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA---AAFD 337 Query: 368 TDDL 371 DDL Sbjct: 338 FDDL 341 >UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain n=1 Tax=Escherichia phage rv5 RepID=B3RGP5_9CAUD Length = 362 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 93/346 (26%), Positives = 172/346 (49%), Gaps = 15/346 (4%) Query: 17 PMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFIS 76 P+F GQ + + +KY +L +KQ W +EVD+S+ D+ + + + Sbjct: 17 PLFLGQQMGMYDSINKKYPQLFELYKKQKEQDWAEDEVDLSQSISDFVTCSKSTYDVMVQ 76 Query: 77 NLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 L +Q DS+ RS P I+ EL T + + E +H+ +Y+ I+R + + Sbjct: 77 TLMWQWEADSVAARSIICLFSPFITNSELFTLLMKQSEIEVLHALTYSEIVRQCLPNARE 136 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 + ++I N+ + R+ I Y EL ++G + ++ +V + ++K + Sbjct: 137 IIEEIQENQNVLSRSGVIVKYMQEL-------EVIG-AKYRLDPSSVKEDI--VRKCILR 186 Query: 197 CLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 L ++ ALE+I F SFAC+FA AE+ + A++++ I DE LH G ++++L Sbjct: 187 ALFALLALESIEFIASFACTFAVAEQGIFVQVAQLVQKIMLDEMLHSKGDFAIIDIL--- 243 Query: 257 ADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLNKDILCQYVEYITNI 315 +DP + E K E ++ + +E W+DY+F +G ++IGLN +L ++V+Y + Sbjct: 244 LNDPAWEKSFLEIKGELKEILDEVRTKEYGWSDYIFSEGRAIIGLNSPLLKEWVDYNCSP 303 Query: 316 RMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 G+D F +P+P++ W+ Q A QE+ + Y V Sbjct: 304 IYDYYGIDKDFVPPTKDPLPFMQVWMKPSLQQTANQEMSNTDYRVN 349 >UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Epsilonproteobacteria RepID=RIR2_HELPJ Length = 341 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 160/345 (46%), Gaps = 30/345 (8%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 +F G P ++ ++ KY + L + L+ W EEV ++ D+ DY L EK + Sbjct: 22 IFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLSAEEKIGYDRA 81 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV 137 L +DS+Q + + P I+ PE+ + A+ E +HS +Y ++ +I + + Sbjct: 82 LAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEI 141 Query: 138 FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 +D + Q++ + + I+ Y EL + + ++L Sbjct: 142 YDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILK------------------------A 177 Query: 198 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 L + LE I FY F+ + A M G+A++IR I RDE HL Q+M+N LR+ Sbjct: 178 LFANQILEGIYFYSGFSYFYTLARSGKMLGSAQMIRFIQRDEVTHLILFQNMINALRNER 237 Query: 258 DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRM 317 D + E ++F +A + E W DY+ G ++GL ++ QY++++ + R+ Sbjct: 238 ADL----FTPQLINEVIEMFKKAVEIEASWGDYI-TQGKILGLTSSLIEQYIQFLADSRL 292 Query: 318 QAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 VG+ + + +PI W+ ++ + + E VS+Y G + Sbjct: 293 SKVGIAKVYGVQ-HPIKWVESFSSFNEQRSNFFEARVSNYAKGSV 336 >UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subunit n=4 Tax=Myoviridae RepID=A2PYM8_9CAUD Length = 348 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 89/317 (28%), Positives = 146/317 (46%), Gaps = 36/317 (11%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 K +F G P N+ KY L + + W P+ D++ D +Y +P + + F Sbjct: 19 KRRLFGGNPTNIINLKDVKYKWASHLFTEMRANIWIPQATDLTPDINNYVTMPPNMRRAF 78 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV--N 132 L Y T LDS+Q R + L+P+I+ PE+ + E +HS+SY +II ++ + Sbjct: 79 DGMLSYLTFLDSLQTRVLPL-LMPVITAPEVSICMGEQLSQEQVHSQSYAYIIETVIPTD 137 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +++ + + KR E I + YD I H + + T+S Sbjct: 138 KRDYIYELWREDPVLLKRCEYIQNLYDRYI-------------HEMTMENYTIS------ 178 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 ++S LE I F+ F +A A M A II+LI RDE HL + + N+ Sbjct: 179 -----MVSDFLLEGIYFFPGFRLFYAIANERYMSATADIIKLIERDEQTHL---KLISNI 230 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 +R+G + + + E DLF +AA+ E +W L + G+N + QY +Y+ Sbjct: 231 IRTGLAEGTLMWDTD----EIIDLFRKAAEYEIEWG--LHIGLGVNGINATTIEQYAKYL 284 Query: 313 TNIRMQAVGLDLPFQTR 329 NIR +A+GL F+ R Sbjct: 285 CNIRARAIGLPTVFEGR 301 >UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_SYNY3 Length = 355 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 91/368 (24%), Positives = 174/368 (47%), Gaps = 52/368 (14%) Query: 6 FSQTKNDQLK-EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F+ T ND ++ ++FG N+ + + +Y+ L ++ FW P+ +D+++D DY Sbjct: 18 FNPTGNDSVENRTIWFGNTTNLMQLNDVRYNWAVGLYQQMRENFWIPQRLDITQDVTDYW 77 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSETIHSRSY 123 L E++ F L Y T LDS+Q + N+ L ++ PE+ + E +H++SY Sbjct: 78 NLTNEERYAFDGILSYLTFLDSVQ--TCNIPHLKSSVTAPEISLCMAEQISQEGMHNQSY 135 Query: 124 THIIRNIVNDPSVVFDDIV----TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 ++I I+ P+ D + T+ +++R E I+ Y + ++ + Sbjct: 136 QYMIETII--PTEKRDKVYEFWRTDRVLKERCEYIAMLYQKYVDHPT------------- 180 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 ++ ++ LM+ LE + FY F + A R LM G+A I ++I RDE Sbjct: 181 -----------QENYFIALMADYLLEGLYFYNGFIYFYNLASRMLMPGSADIFKMINRDE 229 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 H+ Q ++ PE ++ + Y++F +A + E W +++ + +++G Sbjct: 230 LSHVRLYQKLI---------PEAMQVFTHSTDQIYEMFDKAVEFECRWTNHIVGN-NILG 279 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQT--RSNPIPWINTWLVSDNVQVAPQ-----EV 352 + + QY +Y+ N R++A+GLD P T R P+ + SD + A E Sbjct: 280 ITESSTEQYTKYLANSRLRAIGLD-PLYTDARYGKSPYTHLERFSDTKKEAHTKANFFEA 338 Query: 353 EVSSYLVG 360 V+SY++ Sbjct: 339 TVTSYVMS 346 >UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67SN7_SYMTH Length = 346 Score = 110 bits (275), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 95/364 (26%), Positives = 163/364 (44%), Gaps = 39/364 (10%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 D K + G P N+ KY+ +KL + L FW PEEV + D Y L E+ Sbjct: 18 DWGKRRIIGGNPTNIMELTNVKYEWAQKLSDIMLRNFWIPEEVPLLDDAKQYLELTADEQ 77 Query: 72 HIFISNLKYQTLLDSIQGRS-PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 + L + +DSI S PN L+ ++ PE+ + F E +HS+SY +++ ++ Sbjct: 78 WAYDRMLSFVIFMDSILTVSMPN--LINYVTAPEINMCLSIHNFHEALHSKSYGYVLESV 135 Query: 131 V--NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 V ++D + Q+ +R I++ + + + H + Sbjct: 136 VPAERRQYIYDLWREDRQLLERNRYIANTFQLFADNPTDEHFVR---------------- 179 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 M+ LE I FY FA +A A M+G A I+ I RDE H+ Q+ Sbjct: 180 --------ACMAQYVLEGIYFYSGFAFFYALARMGKMKGTATEIQFINRDEITHVAVFQN 231 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI-GLNKDILCQ 307 +LN LR + P++ + + + QAA+ E WA Y G+ I GL+ ++L Sbjct: 232 ILNGLRQ--ERPQL--FTPQLDADLRAMIRQAAEHEMAWAAYCV--GNRIQGLSGEVLQG 285 Query: 308 YVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 YV+++ + R +A+G + + NPI W+ ++ + + E V++Y + +D Sbjct: 286 YVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKS---TNID 342 Query: 368 TDDL 371 DDL Sbjct: 343 LDDL 346 >UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Firmicutes RepID=C9LBQ7_RUMHA Length = 359 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 82/346 (23%), Positives = 163/346 (47%), Gaps = 37/346 (10%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 M G N+ ++ +Y + + ++ FW PEE+++S+DR DY L E+ + Sbjct: 35 MIGGNTTNLNDFNNMRYGWVKGWYRQAMNNFWIPEEINLSQDRKDYGELLGKERQAYDKI 94 Query: 78 LKYQTLLDSIQGRSPNVALLP-LISIPELETWVETWAFSETIHSRSYTHIIRNIVN--DP 134 L + LDSIQ S N+ + I+ E+ + F E +HS+SY++++ I + Sbjct: 95 LSFLVFLDSIQ--SANLPCIGEYITANEINLCLSIQTFQECVHSQSYSYMLDTICSPEKR 152 Query: 135 SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 + + T+E++ KR I Y+E +++ L Sbjct: 153 NEILYQWKTDERLLKRNTFIGELYNEF------------------------QMKKDSFTL 188 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 +M+ LE I FY F + + M G+A+ IR I RDE HL ++M +L+ Sbjct: 189 LKVMMANYILEGIYFYSGFMFFYNLSRNGKMPGSAQEIRYINRDENTHLWLFRNM--ILQ 246 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 ++PE+ +E Q ++ ++ +QE W Y+ D + G++K+++ +Y++Y+ N Sbjct: 247 LKEEEPEL--FTKENIQALKEMLMEGVEQEIAWGHYVLGD-DIPGISKEMITEYIKYLGN 303 Query: 315 IRMQAVGLDL---PFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSY 357 +R +G D+ ++ + W++ + ++ V+ E + ++Y Sbjct: 304 LRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAY 349 >UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chain n=4 Tax=unclassified Myoviridae RepID=C5H7Q1_9CAUD Length = 357 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 86/361 (23%), Positives = 166/361 (45%), Gaps = 15/361 (4%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 + P+F G + Y +L ++Q + W +E + R+D++++P + Sbjct: 4 QHPIFLGGERKTFDSLNKHYPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSGVM 63 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 + LK+Q D+ +S A P IS T + + E +H+ +Y+ I+R + +P Sbjct: 64 LEILKWQWEADTQVAKSLAFAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIKNP 123 Query: 135 SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 + D+I N +Q R + ++ +EL++ + L V + K + Sbjct: 124 ETILDEINQNVAVQDRLKTVNRVLEELLDEGINYRL-----SYVRDSLLDKDPLHFHKVI 178 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 L +V ALE I F SFAC+FA ++ +G A+ ++ I DE LH T+ + +L+ Sbjct: 179 LKGLFAVTALEGISFMASFACTFALDAQDKFQGIAQAVQKIMLDEILH---TKIDIEVLK 235 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLNKDILCQYVEYIT 313 D E + ++ E + + + E+ W+ Y+F +G +++GLN +L ++V Y Sbjct: 236 ETLRDDEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAVVGLNTKLLHEWVYYNA 295 Query: 314 NIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 G+ F + P+ ++ + D Q A QE + +YL+ + DDL+ Sbjct: 296 APLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGAYLLNTV-----VDDLN 350 Query: 373 N 373 + Sbjct: 351 S 351 >UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Brachyspira RepID=C0QY28_BRAHW Length = 356 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 85/356 (23%), Positives = 155/356 (43%), Gaps = 17/356 (4%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E +FFG + R D +++ KL E W +EVD D+ + +LPE + F Sbjct: 13 EKIFFGDFGHYLRIDSVSHEVARKLKEASEGNTWFSKEVDYKSDKTRFSSLPEDAQRAFK 72 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 N+ YQTL+DS + L +++ A E IH+ SY++ + + + Sbjct: 73 LNIAYQTLMDSGVTSGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHEA 132 Query: 136 VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLY 195 D+V N++ K M L G N + +L E K+ + Sbjct: 133 TDTLDLVYNDEFVKH------------RMEKEVELFGNVDELCNLENSPATLDEKKQAVL 180 Query: 196 LCLMSVNALEAIRFYVSFACSFAFAER--ELMEGNAKIIRLIARDE-ALHLTGTQHMLNL 252 L+ + LE+++F SF +F + G K I+LIA DE H+ ++++N+ Sbjct: 181 KLLIGIYLLESVKFPFSFLVTFTINNNYDNAIAGFTKTIKLIAHDELNTHVPTGKNVMNI 240 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQ-AAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 LR + E + +E WA YLF + G+N + +++Y Sbjct: 241 LRKENEQGFTHLFKSGWFNETARAMAEFTVNEEIKWAKYLFDGYQVAGINSSVSEHFIKY 300 Query: 312 ITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 +R++ +G++ P+ + +S+ I W N++ + A QE +SY G + +++ Sbjct: 301 WAGVRLRDLGVESPYNEKKSDVIDWFNSYRDINKQNAALQETTNTSYQKGALKNDL 356 >UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain n=43 Tax=Bacteria RepID=B4E5V8_BURCJ Length = 403 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 26/293 (8%) Query: 49 WRPEEVDVSRDRI---DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105 W P+E+++SRD D L E E+ I NL + DS+ + + I+ PE Sbjct: 105 WMPQEINMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPEC 164 Query: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMT 165 ++ AF E IH+ +Y +I+ ++ D +F+ Y E+ + Sbjct: 165 RQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNA-----------------YHEVTSIR 207 Query: 166 SYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA-LEAIRFYVSFACSFAFAEREL 224 + L HT+ E +KL L+ +E + FYV F A + Sbjct: 208 AKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIVFACIMEGLFFYVGFTQILALGRQNK 267 Query: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284 M G A+ + I RDE++H ++N ++ ++P + E + E +LF QA + E Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIK--LENPHL--WTAEFRAEIRELFKQAVELE 323 Query: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 +A+ G ++GLN + Y+ +I+N R Q +GLD F NP PW++ Sbjct: 324 YRYAEDTMPRG-VLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMS 375 >UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C8WWZ0_ALIAD Length = 369 Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 83/358 (23%), Positives = 170/358 (47%), Gaps = 41/358 (11%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQAL 66 ++ D K + G N+ + KY+ KL ++ FW PEE+ ++ D Y L Sbjct: 35 AEGDRDWGKRRIIGGNTTNMIELNNIKYEWAYKLYRAMMNNFWIPEEIPLADDARQYDLL 94 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRS-PNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 + E+ + L + +DS+ + PN+ I+ PE+ + AF E +HS+SY + Sbjct: 95 SDDERRSYNKVLSFLIFMDSLLTHNLPNIN--EYITAPEVNLCLTVHAFQEAVHSQSYGY 152 Query: 126 IIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 ++ ++VN + ++++ ++ + +R + I+ ++E IE + +L+ KT+ Sbjct: 153 VLDSVVNPATRDQIYNEWRNDDHLLRRNQFITDLFEEFIENPTDRNLM---------KTI 203 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 + LE + FY F F + M G I+ I RDE HL Sbjct: 204 VANY---------------ILEGVYFYAGFGFFFVLGRQGKMLGTVSEIKFIQRDELTHL 248 Query: 244 TGTQHMLN-LLRS--GADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 +++ + ++R G P+M E E ++ A Q E W Y+ + G ++GL Sbjct: 249 AIFRNLYHEIIRENPGIVTPDMEE-------EFVEMMRTAVQHEIAWGQYVTQ-GKIVGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSY 357 ++ Y++Y+ N+R+Q++ L + + + + +P+PW++++ ++ + E V++Y Sbjct: 301 TDALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNY 358 >UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB3_9FIRM Length = 347 Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 35/324 (10%) Query: 21 GQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKY 80 G N+ ++ KY + ++ FW PEE+++ +D DY+ LP E+ + L + Sbjct: 26 GNTTNMNDFNNLKYTWTADWYRQAMNNFWIPEEINLGQDVKDYRQLPAAERRAYDKILSF 85 Query: 81 QTLLDSIQGRS-PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFD 139 LDS+Q + PNV+ I+ E++ + +F E +HS+SY++++ I + Sbjct: 86 LVFLDSVQSANLPNVS--AYITANEVDLCLTIQSFQECVHSQSYSYMLDTIASP------ 137 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 +R E I + D+ HLL T G +E ++ +L ++ Sbjct: 138 --------DERQEIIFQWKDDE-------HLLARNTFI--GDLYNEFQQEQSRENFLRVL 180 Query: 200 SVN-ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD 258 N LE I FY F + M G+ + IR I RDE HL +++L LR A+ Sbjct: 181 IANYILEGIYFYSGFMFFYNLGRIGRMPGSVQEIRYINRDENTHLWLFRNILRDLR--AE 238 Query: 259 DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQ 318 +P++ E ++ ++ + +QE W Y + + GLN+ ++ YV Y+ N R + Sbjct: 239 EPDL--FTPEREEMMREMIREGVRQEIAWGKYAIGN-EVEGLNEKMIEDYVHYLGNARAE 295 Query: 319 AVGLDL---PFQTRSNPIPWINTW 339 ++GL F+ + + W++ + Sbjct: 296 SIGLGTLYEGFEEEPSSMRWVSQY 319 >UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit beta n=80 Tax=Bacteria RepID=RIR2_TREPA Length = 351 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 86/352 (24%), Positives = 159/352 (45%), Gaps = 43/352 (12%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 K M G N+ ++ KY K + ++ FW PEE+++S D DY+ L EK + Sbjct: 24 KRRMVGGNTTNLNDFNNMKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYRNLSAIEKTAY 83 Query: 75 ISNLKYQTLLDSIQGRS-PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV-- 131 L + LDSIQ + PN+ I+ E+ + AF E +HS+SY++++ I Sbjct: 84 DKILSFLIFLDSIQTANLPNIG--QYITANEINLCLTIQAFQEAVHSQSYSYMLDTICSP 141 Query: 132 ---NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 ND + D +E + R + I + Y+E + K+V L+ Sbjct: 142 EERNDILYQWKD---DEHLLARNKFIGNLYNEFQD----------------DKSVLALLK 182 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 ++ LE I FY F + M G+ + IR I RDE HL + Sbjct: 183 --------VAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENTHLWLFRS 234 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 ++ L+ ++P++ + D+ + +QE W DY+ D + GLN+ ++ Y Sbjct: 235 IIQELQK--EEPQV--FTARNVRLFRDMIREGCEQEIKWGDYVIGD-QIPGLNRHMVADY 289 Query: 309 VEYITNIRMQAVGLDLPFQT-RSNP--IPWINTWLVSDNVQVAPQEVEVSSY 357 + Y+ N+R + +G + ++ R P + W++ + ++ ++ E + ++Y Sbjct: 290 IRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAY 341 >UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=root RepID=B7GK18_ANOFW Length = 345 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/321 (25%), Positives = 147/321 (45%), Gaps = 38/321 (11%) Query: 21 GQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKY 80 G+ + ++ KY F + + L FW P E+++S D + AL E E+ F+ + Sbjct: 23 GKASGILNWNDIKYSHFYDIYKMLLGNFWTPFEINMSDDIKQWHALSERERDAFLHIIGL 82 Query: 81 QTLLDSIQGRSPNV--ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSV 136 ++LDS+Q PN A+ I+ P ++ E +H++SY++++ +I +++ Sbjct: 83 LSILDSVQ---PNFIGAMKEYITDPSVKAIFSIIEQQEVVHNQSYSYVLASIEKLSEQHR 139 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 F+ TN I KR E + Y+ E TV R L L Sbjct: 140 AFEMARTNPHIYKRNEHVIRVYEAFREQP----------------TVETFCRALVASL-- 181 Query: 197 CLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 LE I FY FA + A + M + +I I +DE H + + L+R+ Sbjct: 182 ------VLEGINFYSGFAFFYNLARNQKMLKTSTMISYINKDELCH---SYFISQLVRAV 232 Query: 257 A-DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNI 315 ++P++ E YD +A + E +W+ ++ RD + G++ + +Y+EY+ N Sbjct: 233 LWENPQIDENG-AFSAWIYDYIDEAIRYETEWSRFVLRD--IDGIDVIEMEKYIEYLGNK 289 Query: 316 RMQAVGLDLPFQTRSNPIPWI 336 R++ +GLD + N +PWI Sbjct: 290 RLRMLGLDDRYDADENSMPWI 310 >UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subunit n=9 Tax=Bacteria RepID=B0RGP8_CLAMS Length = 331 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 76/328 (23%), Positives = 148/328 (45%), Gaps = 36/328 (10%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 +PVN Q D++++ + W P E+ + D D++ + + E+H + Y Sbjct: 16 KPVNY----QWAMDLYDQAVANT----WFPNEIQLGEDIADFKKMTDEERHAITFLMSYF 67 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDI 141 + + ++ + P I+ PE ++ + E H S+ +++ D ++ Sbjct: 68 NPNELLVNKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETFPIDREAAYNSH 127 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 V + ++ E + + E +T+ ++ E KK L++ Sbjct: 128 VDIPSMARKEEFEVKFIKRMTE-----------------QTLDITTTEGKKDFVRNLVAY 170 Query: 202 NA-LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT-GTQHMLNLLRSGADD 259 N LE I FY F S +F +R L+ ++ I RDE+LHL G +L +L D Sbjct: 171 NVILEGIWFYSGFMVSLSFRQRNLLRNFGSLMDWIVRDESLHLKFGINLILTVLEENP-D 229 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + E A E KQ + + A + E+ + L +G ++GLN + + QYV+Y+ + R++ Sbjct: 230 LQTEEFAAEIKQ----MILDAVEMEEQYNRDLLPNG-ILGLNANYINQYVKYLADRRLEE 284 Query: 320 VGLDLPFQTRSNPIPWINTWLVSDNVQV 347 +G + ++ SNP W+ T +D +Q+ Sbjct: 285 LGFEAEYKV-SNPAKWMAT--ANDTLQL 309 >UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit beta n=13 Tax=Bacillales RepID=RIR2_BACHD Length = 345 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 77/324 (23%), Positives = 144/324 (44%), Gaps = 37/324 (11%) Query: 21 GQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKY 80 G+ NV +D ++ L + L+ FW P E+++S D + L E E+ F + Sbjct: 24 GKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGL 83 Query: 81 QTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDD 140 LDS+Q ++ ++ L + +F E +H++SY++++ ++V P D+ Sbjct: 84 LAFLDSVQ-TDYSMRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLV--PKATQDE 140 Query: 141 IVT----NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 I ++ +++R E I Y++ ++ + L + V Sbjct: 141 IFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDV------------------ 182 Query: 197 CLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 LE + FY FA + A + M + +I I RDE LH+ ++ L Sbjct: 183 ------ILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELL-- 234 Query: 257 ADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIR 316 + PE+ EE K ++AA EKDW Y+ D + G+N + + Y+ +I N R Sbjct: 235 VEFPELN--TEETKTFVKTTLMKAADLEKDWFRYIIGD-KIPGINPEDMETYISFIANKR 291 Query: 317 MQAVGLDLPF-QTRSNPIPWINTW 339 +G++ P+ + + NP+ WI + Sbjct: 292 AVQLGMEKPYPEIKHNPMKWIRAY 315 >UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7_9CAUD Length = 387 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 79/338 (23%), Positives = 150/338 (44%), Gaps = 41/338 (12%) Query: 49 WRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETW 108 W E D S ++++ + + I L +Q DS+ RS L P+++ + Sbjct: 55 WDELEFDFSTCLVEFETCDKSTYDMMIKTLAWQWEADSVASRSIVNILSPVMTDSRVWAG 114 Query: 109 VETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYW 168 +E +H+ +Y+ I+RN DP V+ D+I+ E+ Q+R M + Sbjct: 115 YVRINDNEDVHALTYSEIVRNSFKDPKVILDEILRVEEAQER-------------MVAVA 161 Query: 169 HLLGEGTHTVNGKTV--TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELME 226 +GE V+ + + +EL K+++ +++ LE I+F SFA +FA + Sbjct: 162 RTMGEAHDAVHAYALNQVPNDQELYNKVFMFFIALYFLERIQFMASFAVTFAIGRTGAFQ 221 Query: 227 GNAKIIRLIARDE-ALHLTGTQHMLNLLRSGADDPEMAEIA-EECKQECYDLFVQAAQQE 284 A ++ IA+DE +H Q ++ L + E ++A +CK + +L + + E Sbjct: 222 QIAAAVKKIAQDEFEIHAQYGQEVIRALLA----TERGKLAYSQCKDKIIELLWEIVKTE 277 Query: 285 KDWADYLFRDG-SMIGLNKDILCQYVEYITNIRM------------------QAVGLDLP 325 W +YLF +G + G+N L +V + N ++ G D Sbjct: 278 VTWINYLFSEGRELTGVNATKLINWVLFNANAAATFLSIENDVVEQYQVEFKESAGFDFV 337 Query: 326 FQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + NP+ ++ +L + Q +PQE E Y+V ++ Sbjct: 338 WPEK-NPLLYMEDYLDISSTQASPQEEEKPDYMVNVVN 374 >UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=root RepID=C4L4U4_EXISA Length = 346 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 82/322 (25%), Positives = 149/322 (46%), Gaps = 33/322 (10%) Query: 21 GQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKY 80 G+ ++ ++ Y F + ++ LS FW P+E+ +S+D + L E E+ F + Sbjct: 23 GETSSIVNWNDIAYPQFYTIYKQLLSNFWIPDEISMSKDMQQWPQLTEREQDAFKRIIGL 82 Query: 81 QTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV--NDPSVVF 138 ++LDS+Q R + S + + A E +H++SY++++ ++V + + +F Sbjct: 83 LSILDSVQTRYI-LESSMFSSDSSVHAVLAVIAQQEVVHNQSYSYVLSSLVPLAEQNRIF 141 Query: 139 DDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCL 198 + +E + KR + I Y+ E T N + SL + Sbjct: 142 NIAKDDEMVMKRNQFILDLYEAFRE-------------TPNAENFAKSL----------V 178 Query: 199 MSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD 258 SV LE I FY FA + A + M G + +I I RDE H +L + + + Sbjct: 179 ASV-ILEGINFYSGFAYFYNLARHQKMVGTSTMISYIQRDEMQHSYFISQLLRAVLT--E 235 Query: 259 DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQ 318 +P++ E + Q YD +A E +W +Y+ RD + GL+ + YV+Y+ N R++ Sbjct: 236 NPKIDENG-QFSQFVYDTMAEAVDLEIEWCEYVLRD--LDGLDVSEMRDYVKYLANKRLR 292 Query: 319 AVGL-DLPFQTRSNPIPWINTW 339 +GL DL + +PWI + Sbjct: 293 VIGLNDLYEGFDEDVMPWIRAY 314 >UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subunit n=4 Tax=Aquificales RepID=C0QUH3_PERMH Length = 329 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 82/351 (23%), Positives = 166/351 (47%), Gaps = 36/351 (10%) Query: 14 LKEPMFFGQPV---NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 +K+ F G+ N+ + +Y +F+++ KQ W PEE+++ +D +DY++L E Sbjct: 1 MKKLQFIGKTSVKDNIRLTENPRYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKSLTPTE 60 Query: 71 KHIFISNLKY----QTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 K +F +++ Y + L+ ++ G P+++ P + T F E IHS + I Sbjct: 61 KDLFDTSVGYFASSELLVQNVLGN----GFFPVLTDPYAKMSFSTQMFMENIHSDFFEII 116 Query: 127 IRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVS 186 + D +++ + ++ + ++ E I D + +Y GK + Sbjct: 117 LNTFEMDRKRIYNITLEDKLLMEKQELIIRAVDRI----TY------------GKADPDT 160 Query: 187 LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL-TG 245 L K+ L L++ E + FY +FA FA + M+ + LI DE+LHL G Sbjct: 161 LEGKKQILTAILLNNIIQEGMFFYSAFAHFFAMKDTGKMKNVVSGVELILIDESLHLQNG 220 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 + +L ++ ++PE+ + E+ + + + A + E ++ F ++ G++ L Sbjct: 221 IEAILTIVE---ENPEIVD-DEKFVENIKETIIDAVELELNYLKTKFGGTTIFGVSYKEL 276 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 +Y++YI + R++ +G D F+ NP+ +L ++V+ EVSS Sbjct: 277 EKYMKYIADRRLEELGFDPQFKIDQNPLK----FLQKEDVKKLTNFFEVSS 323 >UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD Length = 352 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 43/296 (14%) Query: 48 FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELET 107 FWRP E+ + D + +L E+ F+ LDS+Q + A+L +I Sbjct: 58 FWRPVEIKMKEDEKMWDSLTPIEQDTFLRVGTALACLDSLQVK----AILEVIRFTTNSA 113 Query: 108 WVETWAF---SETIHSRSYTHIIRNIVNDP--SVVFDDIVTNEQIQKRAEGISSYYDELI 162 AF E H+ SY++I ++V P + F++ + + + KR + + Y++ Sbjct: 114 LANISAFIAQQEATHTTSYSYITSSLVRLPVQNQYFNETMKHPVLAKRNKLVLDVYEDFA 173 Query: 163 EMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER 222 E S L+ + + S+N LE I FY FA + A + Sbjct: 174 ENPS-----------------------LQNLFRMLVQSIN-LEGIYFYSGFAFFYWLASQ 209 Query: 223 ELMEGNAKIIRLIARDEALHLTGTQHMLNLL--RSGADDPEMAEIAEECKQECYDLFVQA 280 + M ++ +I I RDE H + + LL R ++PE+ +E Q D +A Sbjct: 210 QKMMKSSTMISYIQRDEMQH----AYFIGLLIRRLLTENPELN--TQENAQYIVDSLKEA 263 Query: 281 AQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWI 336 EK+WA + D + GL+ + Y+EY+ N R++ +G+D ++ R NP+PWI Sbjct: 264 VATEKEWAGEILAD--IEGLDLEEFDHYIEYLANKRVRQLGMDNIYEERGNPMPWI 317 >UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=UPI0001976997 Length = 347 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/307 (24%), Positives = 143/307 (46%), Gaps = 34/307 (11%) Query: 36 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 ++ +LI++ FW P+EV +S+D++ + + E E+ +F++ + +LDSI NV Sbjct: 39 VYYELIKEMREVFWIPDEVSMSKDKVQWATEMNEMEQELFLNAIGILAVLDSIATYFDNV 98 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAE 152 A I ++ + A ETIH+ SYT+I+ ++ + VF+ NE + +R + Sbjct: 99 AAY-YIRDSAIKALMAFVAAMETIHNESYTYILSSVSSKAVSLDVFERPKKNEFMIRRNK 157 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 + +DE I+ + + L++++ LE + F Sbjct: 158 LMMDLFDEFIQNPT------------------------PETFAKGLVAMSGLEGLCFVNG 193 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 F + F M G +I+ I RDE H ++ + + PE+ EE + Sbjct: 194 FTPFYHFNRNGKMFGTGTVIQYIQRDEMKHSYFQTILVRDILTQY--PELN--TEEFSEF 249 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNP 332 YD F + Q E+++ + L+++ I + + + +Y+ Y N+ + +GLD F + NP Sbjct: 250 VYDFFTELVQLEREFCEDLYKNTPDIDIEE--VKEYIGYRANLILDNLGLDQIFSAKKNP 307 Query: 333 IPWINTW 339 +PWI + Sbjct: 308 MPWITAF 314 >UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E3 Length = 309 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/314 (24%), Positives = 142/314 (45%), Gaps = 34/314 (10%) Query: 49 WRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETW 108 W P V+++ D Y L ++ +F L + + LD IQ + N + ++ PE+ Sbjct: 23 WFPHVVNMADDVASYNRLNAADRFMFDKALAFLSNLDGIQFNNINQNIAKHVTSPEVSMC 82 Query: 109 VETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYW 168 + A+ E +H +SY II + DP V+ +T E+ +G+ + ++ I S Sbjct: 83 LSRQAWEEALHVKSYATIIETVSLDPMSVY---MTFER-----DGLLAQKNQFILKQS-- 132 Query: 169 HLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGN 228 LLGE + G ++ C+ +V LE + F+ F + A++ M G+ Sbjct: 133 RLLGE-KFSAEGFALS------------CVSNV-LLEGVYFFSGFLSFYLLADKGEMLGS 178 Query: 229 AKIIRLIARD-EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDW 287 A +IR I RD E HL HML+ LR D + + ++F+ +++ E W Sbjct: 179 ADMIRYIQRDEEGTHLDLFAHMLDTLRHENKDV----FTQSFWNKALEVFLTSSEMEISW 234 Query: 288 ADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD-LPFQTRSNPIPWINTWLVSDNVQ 346 Y+ + + N + Y++++ N+R + + +P+ NP PW+ + + + Sbjct: 235 GKYITKGVT----NPKAIEDYIKHLANLRAEQIQAPFVPYPGVKNPFPWVEQFSKPNTSE 290 Query: 347 VAPQEVEVSSYLVG 360 E V+ Y VG Sbjct: 291 KNFFETRVTDYKVG 304 >UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Bacteria RepID=C6D5U5_PAESJ Length = 318 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 38/289 (13%) Query: 48 FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELET 107 FW EE+ +S D++D+ + + E+ ++ + L TLLD+IQG +L + + + Sbjct: 25 FWTDEEIPLSDDKMDWMEMSDTERTVYKNVLGGLTLLDTIQGGVGMPKILEHVDGLQRKA 84 Query: 108 WVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMT 165 + + E IH++SY+ I + + + +F + TNEQ+QK+A +SS+Y + Sbjct: 85 VLAFMSMMEQIHAKSYSSIFTTLASTEEIDAIFQWVETNEQLQKKATLVSSWYQGI---- 140 Query: 166 SYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELM 225 E K++LY + + LE+ FY F A + M Sbjct: 141 -----------------------ETKQQLYKAMAASVFLESYLFYSGFFYPLYLAGQGKM 177 Query: 226 EGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEK 285 + +II LI RDE++H + L + E A++ K+E + L + E Sbjct: 178 TSSGEIIDLILRDESIHGLYVGVLAQELFNQFTPEEQAQL----KEEVFALLNTLYENEV 233 Query: 286 DWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPI 333 + D L+ S IGL +D+ YV Y N + +G + F + NPI Sbjct: 234 VYTDNLY---SPIGLQEDVKA-YVRYNANKALMNLGFEPYFPEEPVNPI 278 >UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit beta n=182 Tax=cellular organisms RepID=RIR2_CHLTR Length = 346 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 141/293 (48%), Gaps = 28/293 (9%) Query: 49 WRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELE 106 W P E+ + +D +++ L E E+ + + NL + + +S+ G + +A+ ++ PE Sbjct: 51 WLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEAR 110 Query: 107 TWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTS 166 ++ AF E +H+ ++ +I ++ D +F+ NE+ +A+ D +E+T Sbjct: 111 QYLLRQAFEEAVHTHTFLYICESLGLDEKEIFN--AYNERAAIKAKD-----DFQMEITG 163 Query: 167 YWHLLGEGTHTVNGKTVTVSLRELKKKL--YLCLMSVNALEAIRFYVSFACSFAFAEREL 224 T +V G L+E K L Y +M E I FY F +F + Sbjct: 164 KVLDPNFRTDSVEG------LQEFVKNLVGYYIIM-----EGIFFYSGFVMILSFHRQNK 212 Query: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284 M G + + I RDE +HL ++N ++ ++PE+ E +QE +L +A E Sbjct: 213 MIGIGEQYQYILRDETIHLNFGIDLINGIKE--ENPEIW--TPELQQEIVELIKRAVDLE 268 Query: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 ++A G ++GL + YV++I + R++ +GL + T+ NP PW++ Sbjct: 269 IEYAQDCLPRG-ILGLRASMFIDYVQHIADRRLERIGLKPIYHTK-NPFPWMS 319 >UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit beta n=504 Tax=root RepID=RIR2_MYCLE Length = 325 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/292 (26%), Positives = 122/292 (41%), Gaps = 48/292 (16%) Query: 48 FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELET 107 FW PE+V VS D + L EK + + TLLD+IQG V+L+P P E Sbjct: 36 FWLPEKVPVSNDLPSWGTLTASEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEA 95 Query: 108 WVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYY--DELIE 163 AF E++H++SY+ I + + + F N +Q++A+ + YY DE Sbjct: 96 VYTNIAFMESVHAKSYSSIFSTLCSTAEIDEAFRWSEENNNLQRKAKIVMEYYRGDE--- 152 Query: 164 MTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERE 223 LK+K+ L LE+ FY F ++ R Sbjct: 153 -------------------------PLKRKVASTL-----LESFLFYSGFYLPMYWSSRA 182 Query: 224 LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQ 283 + A +IRLI RDEA+H + DD AE+ E + ++L+ + Sbjct: 183 KLTNTADMIRLIIRDEAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVEY 242 Query: 284 EKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF---QTRSNP 332 +D D +GL +D+ +++ Y N + +G + F +T NP Sbjct: 243 TQDLYD-------RVGLTEDV-KKFLRYNANKALMNLGYEALFPRDETDVNP 286 >UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Bacteria RepID=B0U5P0_XYLFM Length = 349 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 78/337 (23%), Positives = 142/337 (42%), Gaps = 38/337 (11%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + +N + G+ + ++ Y F + ++ + FW P+EVD+ D+ Y L Sbjct: 15 EPRNPNRSTGIINGKTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDKRQYGELS 74 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSP-NVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 EK+ + + + LDS Q R NVA I+ P E IH+ SY+++ Sbjct: 75 AREKNAYDAIIGLLATLDSPQTRFIYNVA--EYITDPAAHANAAIIGQQEVIHNESYSYV 132 Query: 127 IRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 + +I + + + VF+ T+ I KR I YD+ + Sbjct: 133 LASITDLANQNRVFEIARTHPTILKRNAPIMQAYDDFMR--------------------- 171 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 + + L L+ + LE I FY FA + + M G KII I RDE H Sbjct: 172 ---EKTAETLLYSLIQSSILEGINFYSGFAYFYNLVRQNRMTGTGKIISFINRDELAH-- 226 Query: 245 GTQHMLNLLRS-GADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 T+ + ++R+ ++PE+ + + F A + E W + + G++ + Sbjct: 227 -TKFISEVIRAIVGENPELQ--TDALTDYVHQAFAHAIELETQWTGEVL--NGIDGIDVE 281 Query: 304 ILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTW 339 + +YV+Y N +G++ + +T N +PWI + Sbjct: 282 EMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAY 318 >UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Propionibacterineae RepID=D1YE85_PROAC Length = 328 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/316 (20%), Positives = 139/316 (43%), Gaps = 32/316 (10%) Query: 34 YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPN 93 YD++ + + W P E+ + D D+ + E H + Y + + ++ Sbjct: 22 YDLYNQAVANT----WFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNELLVNKALA 77 Query: 94 VALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEG 153 + P ++ E ++ + E H ++ +++ D + + + ++ Sbjct: 78 FGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVPSMARKEAF 137 Query: 154 ISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA-LEAIRFYVS 212 ++ + E +T+ ++ E K+ L++ N LE I FY Sbjct: 138 EVAFIKRMTE-----------------QTLDITTVEGKQDFVRNLIAYNIILEGIWFYSG 180 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLT-GTQHMLNLLRSGADDPEMAEIAEECKQ 271 F + +F +R L+ +I + RDE+LHL G +L +L ++PE+A +E Sbjct: 181 FMVALSFRQRNLLRNFGSLIDWVVRDESLHLKFGMNLILTVLE---ENPEIA--TDEFAA 235 Query: 272 ECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSN 331 E +D+ VQ + E+ + + G ++G+N D + YV+Y+ + R++ +G + ++ N Sbjct: 236 EIHDMIVQGVEMEEQYNRDMLPRG-ILGMNADYVNDYVKYLADRRLEELGFEPEYRV-VN 293 Query: 332 PIPWINTWLVSDNVQV 347 P W+ T +D +QV Sbjct: 294 PAKWMAT--ANDTLQV 307 >UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P4N2_FUSNV Length = 245 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 29/227 (12%) Query: 21 GQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKY 80 G N+ + +Y +L ++ FW PE+VD+++D+ DY+ L E+ + L + Sbjct: 27 GNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKNDYENLTVPEREAYDGILSF 86 Query: 81 QTLLDSIQGRS-PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VV 137 LDSIQ + PN++ ++ PE+ + F E IHS+SY +II +I+ S ++ Sbjct: 87 LIFLDSIQTNNIPNIS--DHVTAPEVNLLLAIQTFQEAIHSQSYQYIIESILPKQSRDLI 144 Query: 138 FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197 +D ++ + +R I+ Y + I+ E + K + + YL Sbjct: 145 YDKWRDDKVLFERNSFIAKIYQDFID---------EQSDENFAKVIIAN--------YL- 186 Query: 198 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 LE++ FY F + A R M G + IIRLI RDE H+ Sbjct: 187 ------LESLYFYNGFNFFYLLASRNKMVGTSDIIRLINRDELSHVV 227 >UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=Proteobacteria RepID=Q2S729_HAHCH Length = 405 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 131/296 (44%), Gaps = 37/296 (12%) Query: 49 WRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELET 107 W P ++++S+D DY L EKH++ + L Y T D + R+ +A++ +S PEL+ Sbjct: 113 WTPLDINMSQDVYDYHHKLTLEEKHVYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQI 172 Query: 108 WVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSY 167 + + E++H+ +Y H I I D S +++ I ++ + + L+ Sbjct: 173 YQARQVYEESLHTWTYQHCIETIGLDQSEIYNRYRVTPAIYRKIKMGNERISALLR---- 228 Query: 168 WHLLGEGTHTVNGKTVTVSLR---ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAEREL 224 ++LR +L+ + + E FY F+ FA R L Sbjct: 229 ---------------PDINLRNRDDLETFVMAYIFFAGIFEGCWFYNGFSPIFALQRRGL 273 Query: 225 MEGNAKIIRLIARDEALHLT-GTQHMLNLLRSGAD--DPEMAEIAEECKQECYDLFVQAA 281 M+G + ++ I RDE +H G + + +++ DP+ + L+ +A Sbjct: 274 MKGTGEQLQYIMRDEVMHCAFGIRVVKQIIKEEGVTLDPKAIKT----------LWEEAE 323 Query: 282 QQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 E +A +L ++ ++G + + +I N R + + LD PF N +PW++ Sbjct: 324 AAETGYAHFLLKE-PILGYTAEDHIEQFRFIANRRAKQLKLDEPFPGAGNALPWLD 378 >UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K6_THERP Length = 328 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/293 (24%), Positives = 140/293 (47%), Gaps = 32/293 (10%) Query: 49 WRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELET 107 W PEEV + D D+ + L + E+ L + ++S+ + ++L ++ PE Sbjct: 36 WFPEEVPLHDDVRDWHERLSDEERRAVEMFLGFFNPMESLVTTNLLLSLYRAVTAPEARL 95 Query: 108 WVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIE--MT 165 ++ A+ E H ++ ++I+ + D VF V + + + EL + + Sbjct: 96 YLARQAWEEANHVMAFEYVIKTLPLDRERVFGLHVEHPAVAAK---------ELFQRQLA 146 Query: 166 SYWHLLGEGTHTVNGKTVTVSLRELKKKL--YLCLMSVNALEAIRFYVSFACSFAFAERE 223 W L+ +V G L+ L + L Y + LE I FY FA + AF +R Sbjct: 147 EQW-LVTPDVESVEG------LQRLVRNLVGYFVI-----LEGIFFYSGFALALAFRQRN 194 Query: 224 LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQ 283 L+ G I+ + +DE+LHL+ H++ + + PE+ A ++ +L ++A + Sbjct: 195 LLRGLCTIVDWVLKDESLHLSFGIHLITTILE--EHPEIMSAA--FGRQLRELILRAVEL 250 Query: 284 EKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWI 336 E+ + + + +IGL+ D+L +YV YI + R++ +GL + F NP+ W+ Sbjct: 251 EEAYNRAVLPE-PLIGLDADVLNRYVRYIADRRLEELGLPIAF-GEPNPLRWM 301 >UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Halobacteriaceae RepID=B0R7R4_HALS3 Length = 331 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 78/333 (23%), Positives = 137/333 (41%), Gaps = 33/333 (9%) Query: 34 YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDSIQGRS 91 YD + ++ ++ W PEEV + D +Q L + E+ + NL + + +S+ + Sbjct: 20 YDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAESLTANN 79 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 +A+ ++ PE ++ A+ E +H+ ++ + ++ DP Sbjct: 80 IVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGFDP----------------- 122 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA-LEAIRFY 210 E + YD + + + T V+ + T+ + + L+ +E I FY Sbjct: 123 EHMYGMYDRIPSIAEKDEFVVGLTRAVDDQAFTIDTDDDLRDFLRDLVGFYVIMEGIFFY 182 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 FA A R M G + I RDE+LHL ++N +R D A+ E Sbjct: 183 AGFAMMLALKRRGKMVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVN 242 Query: 271 QECYDLFVQAAQQEKDWADYLFRDG---SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 L A E+ +A RD ++G++ + YVEY+ + R Q + +D P Sbjct: 243 S----LMRDAVDLEQLYA----RDACPDDLLGMSSEQFADYVEYVADRRFQQLRMD-PVY 293 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 NP PW+ T V N + E VS Y G Sbjct: 294 GTDNPFPWM-TEQVDLNTETNFFERNVSEYQQG 325 >UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Proteobacteria RepID=B0TZS9_FRAP2 Length = 410 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/321 (22%), Positives = 138/321 (42%), Gaps = 37/321 (11%) Query: 49 WRPEEVDVSRDRIDYQ--ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELE 106 W +E+D+S D D++ + + EK + L+ T D G++ +PL E+ Sbjct: 120 WIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDVAVGQNYYDQFIPLFKNNEVR 179 Query: 107 TWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTS 166 + ++A E IH R+Y ++ND + D S Y +E Sbjct: 180 NMLGSFAAREGIHQRAYA-----LLNDTLGLPD----------------SEYHAFLE--- 215 Query: 167 YWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELME 226 Y + + ++ T ++ L LCL E + + SFA F M+ Sbjct: 216 YKAMTDKIDFMMDANPNT------RRGLGLCLAKTVFNEGVALFASFAMLLNFQRFGKMK 269 Query: 227 GNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKD 286 G K++ RDE++H+ G + + ++P + + + K+E Y + +A + E Sbjct: 270 GMGKVVEWSIRDESMHVEGNAALFRIYCQ--ENPYIVD--NQFKKEIYLMASKAVELEDK 325 Query: 287 WADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQ 346 + D + G++ GL D + +Y+ +IT+ R+ +GL+ + NP+ W+ W+++ Sbjct: 326 FIDLAYEIGTIEGLKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLE-WILNGADH 384 Query: 347 VAPQEVEVSSYLVGQIDSEVD 367 E V+ Y V + D Sbjct: 385 TNFFENRVTEYEVAGLTGNWD 405 >UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Bacteria RepID=C9XQ14_CLODC Length = 323 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 68/312 (21%), Positives = 142/312 (45%), Gaps = 38/312 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TLL Sbjct: 10 NAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLL 69 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIV 142 D+ QG + +++ L + + + E IH++SY+ I ++++ + +F+ I Sbjct: 70 DTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIE 129 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 T +Q++A+ + + Y+ +T N ++ LYL +++ Sbjct: 130 TEPTLQRKADLVLAQYE----------------NTTN-----------QEGLYLSMVTSV 162 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 LE+ FY F + + M + +II LI RDE+LH + LL D Sbjct: 163 FLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLH----GKYIGLLAQEIYDSFD 218 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + +++ Y + + E ++ + ++R+ GL K++ +++Y N ++ +G Sbjct: 219 KMDKKMLEEKMYSILYSLMENEIEYTNVIYRES---GLEKEV-VNFLKYNANRALENLGF 274 Query: 323 DLPFQTRS-NPI 333 + + + NPI Sbjct: 275 EKLYTVDAINPI 286 >UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 Length = 419 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/315 (22%), Positives = 135/315 (42%), Gaps = 48/315 (15%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 + + + D+F+ L +KQ + FW EE+D+S D D++ EKH L + LD Sbjct: 111 GKTEHEYADVFQ-LYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAFFASLDQ 169 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 I + + I IP++ +E +H SY+ +I+ D T EQ Sbjct: 170 IVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRD---------TEEQ 220 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 R S +IE + W +N +T +++ R L+ LE Sbjct: 221 ---RHVMRSIQTMPIIEKKALW-----AEKWMNPETASLAER---------LVGFTCLEG 263 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGT----QHMLNLLRSGADDPEM 262 ++F SF + +R+ +G + LIARDE LH T + +H+ N L Sbjct: 264 VQFSGSFCAIYWLKKRQKFKGLSFANSLIARDEGLHATASVLIYKHLKNRLP-------- 315 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 ++ +++F A E ++ ++IG+++ + +Y++++ + + +G Sbjct: 316 -------RERVHEIFKHAVSVECEFISSAL-PVALIGISEKSMTEYIKFVADYWLNQLGY 367 Query: 323 DLPFQTRSNPIPWIN 337 D + +NP W++ Sbjct: 368 DKVYNC-ANPFEWMD 381 >UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclassified Phycodnaviridae RepID=C7U0I3_9PHYC Length = 389 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 77/323 (23%), Positives = 135/323 (41%), Gaps = 51/323 (15%) Query: 49 WRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETW 108 W EEVD+S+D D++ L E+E+ L + D I + N + I E ++ Sbjct: 106 WTAEEVDLSKDLDDWKTLNENEQKFIKYILAFFAGSDGIVFENINNNFADEVQISEARSF 165 Query: 109 VETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMT 165 +E +H +Y+ +I + DPS +F+ I T I+K+A+ ++D Sbjct: 166 YAYQCHNEMVHGETYSKLIDKYIKDPSEKKELFEAIQTVPCIEKKAQWAMKWFD------ 219 Query: 166 SYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELM 225 T + S E L + +E I F SF F +R LM Sbjct: 220 ----------------TKSRSFAER-------LFAFACVEGIFFSGSFCAIFWLKKRGLM 256 Query: 226 EGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEK 285 G LI+RDE LH + LR+ + I E A EK Sbjct: 257 PGLCFSNELISRDEGLHQEFAVELFKTLRNRPGVDTIHAIVRE-----------AVDIEK 305 Query: 286 DWA-DYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344 + D L ++IG+N + + +Y+EY+++ ++ +G+ + ++ NP ++ +S + Sbjct: 306 GFILDAL--PCNLIGMNSEKMSEYIEYVSDRLLKQIGVPTIWNSK-NPFDFMEN--ISLD 360 Query: 345 VQVAPQEVEVSSYLVGQIDSEVD 367 + E V Y G++D + D Sbjct: 361 GKTNFFEKRVGDY--GKLDDDTD 381 >UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta subunit n=83 Tax=root RepID=Q5HMW6_STAEQ Length = 340 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 48/295 (16%) Query: 49 WRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI--PELE 106 W EE S+D ++ L E+ ++ L T LD+ QG +PL++ PE E Sbjct: 31 WTEEEFKPSKDLSVWKTLSADEQETYVKALSGLTGLDTTQGTEG----MPLLAFHYPE-E 85 Query: 107 TWVETWAFS---ETIHSRSYTHIIRNIVNDPSVVF---DDIVTNEQIQKRAEGISSYYDE 160 W +AF E IH +SY+HI +++ + + + N+ + K+ + I+ Sbjct: 86 IWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKEWVPANKYLNKKTKLIT----- 140 Query: 161 LIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFA 220 T+Y+ LL +++Y+ + S LE+ F+ F A Sbjct: 141 ----TNYYKLLKPNP--------------TDREIYVAMASSIFLESFLFFSGFYYPLYLA 182 Query: 221 ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQA 280 + M + +IIR I DE +H +GT + ++ D E E+ ++E +LF Q Sbjct: 183 GQGKMVHSGEIIRKIILDETIHGSGTGYAAQVIF----DKFSKEEQEDIRKELMELFDQL 238 Query: 281 AQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW 335 E ++A L+ +GL +D++ +Y++Y N + ++L ++T NP P+ Sbjct: 239 YFNEVEYAASLY---DKLGLTEDVI-RYIQYNGNRAL----MNLGWETVFNPEPF 285 >UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase small subunit 048L n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR2_IIV3 Length = 376 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 21/291 (7%) Query: 49 WRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELET 107 W +E+++ D D+ L E EK + L++ T D + V L L PE+ Sbjct: 73 WSFKELNMQDDVHDWHNRLSEAEKTFLVQILRFFTQGD-VDVAVGYVQYLQLFQQPEVRM 131 Query: 108 WVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGI--SSYYDELIEMT 165 + ++ E +H SY+H+I + N P V + + + + ++ + E + S + + Sbjct: 132 MLFSFGAREAMHIASYSHLISTL-NLPDVTYQEFLKYKAMKDKHEFVFNSRFKSTTVGRF 190 Query: 166 SYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELM 225 + L G TH L E+ K+ L S +E ++ + SF F LM Sbjct: 191 FNYLLFGYDTH----------LEEIAVKI--ALFSA-FIEGVQLFSSFIMLLNFTRHGLM 237 Query: 226 EGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEK 285 + +II+ DE H T M+ L + + + + D + Q E Sbjct: 238 KKMGQIIQWSIADETHH---TNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQLED 294 Query: 286 DWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWI 336 + D F G M L D + Y+ YITN R+Q +G + NP+PW+ Sbjct: 295 GFIDLAFSMGEMRQLTADDVKSYIRYITNRRLQTMGYLPLYSVVENPLPWV 345 >UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD86 Length = 224 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 29/220 (13%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TLL Sbjct: 10 NAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLL 69 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIV 142 D+ QG + +++ L + + + E IH++SY+ I ++++ + +F+ I Sbjct: 70 DTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIE 129 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 T +Q++A+ + + Y+ +T N ++ LYL +++ Sbjct: 130 TEPTLQRKADLVLAQYE----------------NTTN-----------QEGLYLSMVTSV 162 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 LE+ FY F + + M + +II LI RDE+LH Sbjct: 163 FLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLH 202 >UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit beta n=111 Tax=root RepID=RIR2_BACSU Length = 329 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/313 (21%), Positives = 139/313 (44%), Gaps = 37/313 (11%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 + A + + + D + + + FW PEE+ ++ D + ++ L ++E+ ++ L TLL Sbjct: 6 DAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLL 65 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSE-TIHSRSYTHIIRNIVNDPSV--VFDDI 141 D+ QG + + + + + + A E +H++SY++I + ++ VF+ + Sbjct: 66 DTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWV 125 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 N+ +QK+A+ I Y + ++ + L+ +++ Sbjct: 126 KQNKYLQKKAQMIVGLYKAI-------------------------QKDDEISLFKAMVAS 160 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F F + + + +II LI RDEA+H + LL + + Sbjct: 161 VYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGV----YVGLLAQEIYNKQ 216 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 E E ++ DL Q + E ++ + L+ +GL+ D+ +++ Y N + +G Sbjct: 217 TEEKKAELREFAIDLLNQLYENELEYTEDLY---DQVGLSHDV-KKFIRYNANKALMNLG 272 Query: 322 LDLPFQTRS-NPI 333 D F+ NPI Sbjct: 273 FDPYFEEEDINPI 285 >UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Bacillales RepID=C6IYS7_9BACL Length = 343 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 138/332 (41%), Gaps = 46/332 (13%) Query: 49 WRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETW 108 W +E+ +++D + L E+ F N+ +LDS+Q + + LE Sbjct: 49 WIADEIPMAKDAQQFALLDPEEQRTFKINISLLAVLDSMQTMFVG-DVKRYFTDSSLEAI 107 Query: 109 VETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYW 168 E +H++SY++++ +IV+ EQ QK E+ YW Sbjct: 108 SAIIGQQEVVHNQSYSYVLSSIVS------------EQEQK-------------EIFEYW 142 Query: 169 H----LLGEGTHTVNGKTVTVSLRE--LKKKLYLCLMSVNALEAIRFYVSFACSFAFAER 222 LL N + + R+ + + L++ LE I FY +FA + A Sbjct: 143 KHDPVLLDRNKFIAN---IYQNFRDEPTPQSFFEALVADLILEGIFFYSTFAFFYNLARD 199 Query: 223 ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQ 282 + M G +++I I RDE H + L D PE+ +E Y +A + Sbjct: 200 QKMMGTSQMISYIQRDENQHCYFFAEVFKQLL--IDYPELN--TKENIDYAYRTIDRAVE 255 Query: 283 QEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS-NPIPWINTWLV 341 E +WA Y ++ I LN+ L Y++YI N R+ +GL+ + N +PWI + Sbjct: 256 LETNWAHYTLKNVPGIDLNE--LSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPF-- 311 Query: 342 SDNVQVAPQE--VEVSSYLVGQIDSEVDTDDL 371 SD A + E S G++ + DDL Sbjct: 312 SDEALNATKTDFFEAKSRNYGKVGDDNGFDDL 343 >UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C3B1_9GAMM Length = 374 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 28/318 (8%) Query: 48 FWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105 FW P E+ + D++ + L E E +F SN+ Y T D++ + + A+L I+ E+ Sbjct: 74 FWIPNEIPMGEDKLQWNTGLLTEAEMWLFKSNISYLTASDNLVPDNLDNAILKHITANEM 133 Query: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMT 165 + E+ H SY I+ + D +K I + Y E+ +T Sbjct: 134 RQYFRHQIMEESNHIESYLFILESFGLD--------------EKGQGQIFNLYQEVPALT 179 Query: 166 SY--WHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERE 223 W+L + VN + +L E + L L+S E + F + F+ FA A + Sbjct: 180 EKLNWNLTFT-NNVVNSEAPRGTL-EANRALLEDLISYYIFEYLFFPLGFSQIFALARKG 237 Query: 224 LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFV-QAAQ 282 + A+ I RDE LH + ++ + E E+ + QE V +A + Sbjct: 238 KLRNTAQQYSYIWRDENLHSSNGLWLIKQIIQ-----ENHELWDSTMQERSRAIVSEAVK 292 Query: 283 QEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVS 342 E D+A +G ++GL ++ ++ + + +G+ F+ R +P+PWI+ + ++ Sbjct: 293 LETDYAHASMPEGGIVGLPVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEYELN 352 Query: 343 DNVQVAPQEVEVSSYLVG 360 V E V Y G Sbjct: 353 HEVNFF--EGRVREYQTG 368 >UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=Shrimp white spot syndrome virus RepID=Q9INE3_WSSV Length = 413 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 47/304 (15%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 ++ +K+++ FW EE+D RD D++ L + EK + L + D I + L Sbjct: 79 EMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQILAFFASSDGIVIENLTTRLRQ 138 Query: 99 LISIPELETWVETWAFSETIHSRSYTHIIRNIV---NDPSVVFDDIVTNEQIQKRAEGIS 155 + IPE ++ + E+IH Y +I +V D +++F+ I+K+ + Sbjct: 139 VAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKAILFNAAQHFPAIKKKEQ--- 195 Query: 156 SYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 W +N L EL +++ A+E I F +FA Sbjct: 196 ------------W--------AINWMQSNNDLAEL-------IVAFAAVEGIFFSGAFAS 228 Query: 216 SFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG-ADDPEMAEIAEECKQECY 274 F R ++ G I+RDE LH LL+ G D P ++ Sbjct: 229 IFWIKNRGILPGLTSSNEFISRDEGLH---RDFACMLLKKGFVDTP--------SRERIL 277 Query: 275 DLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP 334 ++ +A + E+++ ++G+N ++ QY+E++ + + +GL+ + +NP P Sbjct: 278 EIVTEAVRIEQEFLTVSL-PVKLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNV-TNPFP 335 Query: 335 WINT 338 +++ Sbjct: 336 FMDN 339 >UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subunit n=2 Tax=Eukaryota RepID=A8IKH1_CHLRE Length = 493 Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 69/307 (22%), Positives = 124/307 (40%), Gaps = 46/307 (14%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSP 92 KY + ++ ++ FW EEVD + D ID+ L E+ L + D I + Sbjct: 183 KYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRFIKYVLAFFAASDGIVMENL 242 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQK 149 + I +PE + E +HS Y+ ++ + V +P + +FD I T + K Sbjct: 243 AARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVREPEERNQLFDAIHTIPTVAK 302 Query: 150 RAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRF 209 +AE W + + V + L+ +E I F Sbjct: 303 KAE---------------WAMRWISSSNVFAER---------------LVGFACVEGIHF 332 Query: 210 YVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEEC 269 SF F +R LM G + LI+RDE LH + + L++ + +I +E Sbjct: 333 SGSFCSIFWLKKRCLMPGLSFSNVLISRDEGLHCDFACCLYSHLKNRLSRERVLQIVDEA 392 Query: 270 KQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR 329 Q + +A E ++G+N D++ QY+ ++ + + ++G + + TR Sbjct: 393 VQLEDEFCTEALSCE------------LLGMNADLMRQYIRFVADRLLVSLGYEKHYNTR 440 Query: 330 SNPIPWI 336 NP W+ Sbjct: 441 -NPFDWM 446 >UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 B n=134 Tax=root RepID=RIR2B_HUMAN Length = 351 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 79/338 (23%), Positives = 132/338 (39%), Gaps = 53/338 (15%) Query: 7 SQTKNDQLK---EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 S T ++K EP+ + Q DI++ + Q SF W EEVD+S+D + Sbjct: 20 SDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASF-WTAEEVDLSKDLPHW 78 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 L EK+ L + D I + + +PE + E +HS Y Sbjct: 79 NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMY 138 Query: 124 THIIRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHL--LGEGTHTV 178 + +I + DP +F+ I T ++K+A+ W L + + T Sbjct: 139 SLLIDTYIRDPKKREFLFNAIETMPYVKKKAD---------------WALRWIADRKSTF 183 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + V + A+E + F SFA F +R LM G LI+RD Sbjct: 184 GERVVAFA----------------AVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRD 227 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E LH M L + + + EI V A + E+++ G +I Sbjct: 228 EGLHCDFACLMFQYLVNKPSEERVREI-----------IVDAVKIEQEFLTEALPVG-LI 275 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWI 336 G+N ++ QY+E++ + + +G FQ NP ++ Sbjct: 276 GMNCILMKQYIEFVADRLLVELGFSKVFQA-ENPFDFM 312 >UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=Actinomycetales RepID=C7NLI2_KYTSD Length = 365 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/344 (22%), Positives = 151/344 (43%), Gaps = 36/344 (10%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRID-YQALPEHEKHIFISNLKYQTLLDSIQGR 90 Q Y++F I+ W EE+D+ D D + L E+H+ + + D+I Sbjct: 51 QFYEMFRDAIKNT----WTVEEIDLHSDLADLHNKLSPAERHLVSRLVAFFATGDTIVAN 106 Query: 91 SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI--- 147 + + L I+ PE ++ F E +H + Y ++ V D + F+ E I Sbjct: 107 NLVLNLYEHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYVPDEAERFEAFAAVENIPSI 166 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN-ALEA 206 + +AE ++ D + LG+ + +E +++ L L+ +E Sbjct: 167 RTKAEFCFTWIDSI-------ENLGQ-----------LETKEQRRQFLLNLICFGTCIEG 208 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + FY +FA + R L+ G A + RDE++H+ ++ +RS D AE+A Sbjct: 209 LFFYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFEVVETVRSEEPDLFDAEMA 268 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + +Q + ++A E +A+ L G + GL+ + Y+E + + R +G+ + Sbjct: 269 GQVRQ----MLMEAVDAEAQFAEDLLGMG-VAGLSVADMRAYLENVADRRAVQLGMPEIY 323 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 T+ NP+ ++ V + E VS+Y VG ++ V D+ Sbjct: 324 GTK-NPLAFMELQDVQELSNFF--ERRVSAYQVG-VEGSVSFDE 363 >UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPK4_PHATR Length = 409 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/309 (21%), Positives = 127/309 (41%), Gaps = 47/309 (15%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQGRS 91 ++D + ++ ++ FW +E+D+S D D+ + L ++E+H L + D I + Sbjct: 100 EHDDLWGMYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLAFFAGADGIVVEN 159 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS---VVFDDIVTNEQIQ 148 +++PE + E IH +Y +I + ++DP ++F ++ Sbjct: 160 LAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFAAHTKVPSVE 219 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 K+A Y G + + R L++ A+E I Sbjct: 220 KKARWAQRYI---------------------GSDASFAER---------LVAFAAVEGIF 249 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 F +F F +R LM G LI+RDE LH + + + L + +M Sbjct: 250 FSGAFCSIFWLKKRGLMPGLTFSNELISRDEGLHCSFACQLYSKLERKLSETDM------ 303 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQT 328 + L +A + EK + G +IG+N ++ QYVE++ + + +G + + Sbjct: 304 -----HKLIGEAVEVEKGFVCDALPVG-LIGMNASLMSQYVEFVADRLLHDLGYRTLYGS 357 Query: 329 RSNPIPWIN 337 + NP W++ Sbjct: 358 K-NPFDWMD 365 >UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Bacteria RepID=RIR2_MYCGE Length = 340 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 56/312 (17%) Query: 30 DQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQG 89 D++ +++ ++++ FW PE++ VS D ++ L + + + TLLD+IQ Sbjct: 37 DEKDLEVWNRIVQN----FWLPEKIPVSNDIPSWKKLSKDWQDLITKTFTGLTLLDTIQA 92 Query: 90 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQI 147 ++ + + +AF +H+RSY I + + + +V E + Sbjct: 93 TIGDICQIDHALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSEQINAAHEWVVNTESL 152 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 QKRA+ + YY T N LK K+ LM Sbjct: 153 QKRAKALIPYY------------------TGND--------PLKSKVAAALMP-----GF 181 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALH--LTGTQHMLNLLRSGADDPEMAEI 265 Y F F + R+ + + IIRLI RD+ +H +G ++ L E + Sbjct: 182 LLYGGFYLPFYLSSRKQLPNTSDIIRLILRDKVIHNYYSGYKYQRKL--------EKLPL 233 Query: 266 A--EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 A +E K ++L + + EKD+ L+ ++ D ++ Y +Q +G D Sbjct: 234 AKQKEMKAFVFELMYRLIELEKDYLKELYEGFGIV----DDAIKFSVYNAGKFLQNLGYD 289 Query: 324 LPF---QTRSNP 332 PF +TR P Sbjct: 290 SPFTAAETRIKP 301 >UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 n=93 Tax=root RepID=RIR2_HUMAN Length = 389 Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 73/323 (22%), Positives = 130/323 (40%), Gaps = 50/323 (15%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 EP+ P + + +DI++ + +K + FW EEVD+S+D +++L E++ Sbjct: 70 EPLLRENPRRFVIFPIEYHDIWQ-MYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFIS 128 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 L + D I + + I E + E IHS Y+ +I + DP Sbjct: 129 HVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 188 Query: 136 ---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHL--LGEGTHTVNGKTVTVSLREL 190 +F+ I T ++K+A+ W L +G+ T + V + Sbjct: 189 EREFLFNAIETMPCVKKKAD---------------WALRWIGDKEATYGERVVAFA---- 229 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 A+E I F SFA F +R LM G LI+RDE LH M Sbjct: 230 ------------AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMF 277 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 L + + ++ ++ + A + E+++ +IG+N ++ QY+E Sbjct: 278 KHL-----------VHKPSEERVREIIINAVRIEQEFLTEAL-PVKLIGMNCTLMKQYIE 325 Query: 311 YITNIRMQAVGLDLPFQTRSNPI 333 ++ + M +G F+ NP Sbjct: 326 FVADRLMLELGFSKVFRV-ENPF 347 >UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=A4XD08_SALTO Length = 350 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/346 (21%), Positives = 150/346 (43%), Gaps = 45/346 (13%) Query: 34 YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPN 93 +D F++ I+ W EEVD+ D D L E+H+ + + D+I + Sbjct: 39 FDRFKEAIKNT----WTVEEVDLHSDLGDLAKLSSAERHLVSRLVAFFATGDTIVANNLV 94 Query: 94 VALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ---IQKR 150 + L ++ PE ++ F E +H + Y +++ V + F E I ++ Sbjct: 95 LNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEKERFAAFAAVENIPSIARK 154 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL-----KKKLYLCLMSVNA-L 204 AE + D + E LREL ++ L L+ A + Sbjct: 155 AEFCFRWIDSIFE-----------------------LRELRTQADRRAFLLNLICFAACI 191 Query: 205 EAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 E + FY +FA + R L+ G A + RDE++H+ +++ +R A++P++ + Sbjct: 192 EGLFFYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTVR--AEEPDLFD 249 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 + +++ ++ +A E +A+ L G + GL+ + +Y++++ + R+ +G+ Sbjct: 250 --ADLERQVKEMVAEAVDCEVQFAEDLLEQG-VSGLSLADMREYLQHVADRRLVTLGI-A 305 Query: 325 PFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 P +NP ++ V + E VS+Y +G + V DD Sbjct: 306 PMYGSANPFAFMELQDVQELSNFF--ERRVSAYQMG-VSGSVTFDD 348 >UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NX45_COPC7 Length = 386 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 93/231 (40%), Gaps = 33/231 (14%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + Y Q +I+ Q SF W EE+D+S D +D+ L E+H Sbjct: 32 EEPLLKPSPKRLTLYPIQYPEIWTHYKRAQASF-WTAEEIDLSHDMMDWSKLTNAERHFL 90 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + +PE + E +HS +Y+ +I + DP Sbjct: 91 SRILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDP 150 Query: 135 S---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 +F I T IQ++AE W L + K+ T + R Sbjct: 151 EERDFLFRAIETIPSIQRKAE---------------WALTW-----TSDKSTTFAER--- 187 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L++ +E + F SFA F +R L+ G LI+RDE +H Sbjct: 188 ------LVAFAVVEGVFFSGSFAAIFWMRKRGLLPGLTFSNELISRDEGMH 232 >UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=B4D9U7_9BACT Length = 390 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 38/298 (12%) Query: 49 WRPEEVDVSRDRIDYQ--ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELE 106 W P+ +D++RD + AL E+ I + Y + + I G S + ++ EL+ Sbjct: 88 WEPDVIDMTRDSQQWNTGALSPKERWIIEMGVGYFSAAEGIVGDSVLHVIEDNLTAAELK 147 Query: 107 TWVETWAFSETIHSRSYTHIIRNI---VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIE 163 E+IH S HII ++ +++ + F DI + +Q++ I+ + EL Sbjct: 148 HASLRHIAEESIHMDSLLHIIGSLNIDLDEVTAKFSDIPS---VQRKNAFITRHMPEL-- 202 Query: 164 MTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN-ALEAIRFYVSFACSFAFAER 222 + + T T N K+K + + +E +FY FA + + Sbjct: 203 -----KMGIDLTQTAN-----------KQKFAKAIFGITQVMEGTQFYALFAMILSLHRQ 246 Query: 223 ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQ 282 M G ++ + RDE+ H+ +++L L A++P++ E + E + + + Sbjct: 247 NKMTGIGQMFQYTLRDESNHIELGRYILTQLI--AENPDI--WTPEFRAELVEFMREGVE 302 Query: 283 QEKDWA-DYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQT--RSNPIPWIN 337 EK++ D L DG +G+ + YVEY + R+ GLDLP + ++NP W++ Sbjct: 303 LEKEFVRDCLPEDG--VGMTQADFLTYVEYNADRRL--AGLDLPALSGVKTNPFAWLD 356 >UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain 1 n=151 Tax=root RepID=RIR2_YEAST Length = 399 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 45/278 (16%) Query: 48 FWRPEEVDVSRDRIDYQALPEHEKHIFISN-LKYQTLLDSIQGRSPNVALLPLISIPELE 106 FW EE+D+S+D D+ + FIS L + D I + + IPE + Sbjct: 107 FWTAEEIDLSKDIHDWNNRMNENERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAK 166 Query: 107 TWVETWAFSETIHSRSYTHIIRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIE 163 ++ E IHS +Y+ +I + DP +F+ I T +I ++AE + + Sbjct: 167 SFYGFQIMIENIHSETYSLLIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADA 226 Query: 164 MTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERE 223 L GE L++ ++E + F SFA F +R Sbjct: 227 ------LFGER-----------------------LVAFASIEGVFFSGSFASIFWLKKRG 257 Query: 224 LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQ 283 +M G LI RDE LH + L++ D + +I E + F+ A Sbjct: 258 MMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPV 317 Query: 284 EKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 +++G+N D++ QYVE++ + + A G Sbjct: 318 ------------ALLGMNADLMNQYVEFVADRLLVAFG 343 >UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_AQUAE Length = 696 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 55/308 (17%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKY----DIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 Q + K + G P N+ ++ KY D+++ + + FW PEE+ + DR Y Sbjct: 18 QGDREASKRKIIKGNPTNIFELNEIKYSWAFDLYKLM---GFTNFWIPEEIQMLEDRKQY 74 Query: 64 QA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP----LISIPELETWVETWAFSETI 118 + L ++EK + L + LDS Q V +L +I+ PE+E + F E++ Sbjct: 75 ETVLSDYEKRAYELVLSFLIALDSFQ-----VDMLKEFGRMITAPEVEMAITAQEFQESV 129 Query: 119 HSRSYTHIIRNIVNDPSVVFDDIVT----NEQIQKRAEGISSYYDELIEMTSYWHLLGEG 174 H+ SY I+ ++V DP V D+I +E++ +R + I+ Y+E I + Sbjct: 130 HAYSYQFILESVV-DP-VKADEIYNYWREDERLLERNKVIAELYNEFIRKPN-------- 179 Query: 175 THTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRL 234 ++ + LE++ FY FA + + M + I+ Sbjct: 180 ----------------EENFIKATIGNYILESLYFYSGFAFFYTLGRQGKMRNTVQQIKY 223 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 I RDE + GT+ L + G D E+ E+ YD+ K +A Y+ RD Sbjct: 224 INRDELCFIEGTEV---LTKRGFVD--FRELREDDLVAQYDIETGEISWTKPYA-YVERD 277 Query: 295 --GSMIGL 300 GSM L Sbjct: 278 YEGSMYRL 285 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 62/115 (53%), Gaps = 11/115 (9%) Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H+T ++++N LR ++PE+ E ++ + F A +E W Y+ ++ ++G+N Sbjct: 577 HVTLFRNIINTLRK--ENPEL--FTPEIEKWIVEYFKYAVNEEIKWGQYVTQN-QILGIN 631 Query: 302 KDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNV-----QVAPQ 350 ++ +Y++Y+ N+R+ +G D + + NP+ WI+ + +N Q PQ Sbjct: 632 DVLIERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQ 686 >UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative n=11 Tax=root RepID=Q5K9L8_CRYNE Length = 430 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 75/319 (23%), Positives = 120/319 (37%), Gaps = 59/319 (18%) Query: 48 FWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELE 106 FW EE+D D ID+ + E E+ + L + D I G + + I E Sbjct: 131 FWTAEELDFGHDLIDWHDRMTEQERFFILRILAFFAASDGIVGENIVSQFALEVQIAEAR 190 Query: 107 TWVETWAFSETIHSRSYTHIIRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYY-DELI 162 + + E +HS +Y+ +I V D +F + I+++A+ Y DEL Sbjct: 191 AFYSFQSMIEQVHSETYSLLIETYVRDAQEKDFLFRGMTNIPCIKQKADWALKYITDELP 250 Query: 163 EMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER 222 T L++ +E I F SFA F +R Sbjct: 251 FRTR-------------------------------LVAFACVEGIFFSGSFAAIFWLKKR 279 Query: 223 ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEEC----KQECYDLFV 278 LM G LI+RDE +H + N L+ E+ I E KQ D Sbjct: 280 GLMPGLTFSNELISRDEGMHTDFACLLYNHLKHRCSTDEVHHIVSEALVIEKQFLTDALP 339 Query: 279 QAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINT 338 A +IG+N ++CQY+E++ + + +G + +NP W+ Sbjct: 340 CA----------------LIGINAHLMCQYMEFVADRLVVDLGYPKIYNA-TNPFDWME- 381 Query: 339 WLVSDNVQVAPQEVEVSSY 357 L+S + E VS+Y Sbjct: 382 -LISLQGKANFFESRVSAY 399 >UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9V1_HYDS0 Length = 319 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/303 (21%), Positives = 130/303 (42%), Gaps = 40/303 (13%) Query: 40 LIEKQLSFFWRPEEVDVSRDRID-YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 L K + +W PEE D++ D+ + Y+ L + E+H + + + + + G++ + + Sbjct: 36 LYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGWVGQNI-LEISK 94 Query: 99 LISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYY 158 I E ++ E H ++ +I+ + P V+ ++I+++A+ Sbjct: 95 RIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLDLKPHEVYAMHENVKEIKRKAD------ 148 Query: 159 DELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFA 218 E+ L E T + + V Y + LE + F+ F A Sbjct: 149 ---FEVKRAMALCEEPTEENLIEDIFV---------YYAI-----LEGLFFFSGFVTPLA 191 Query: 219 FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL-- 276 F R +++ A ++R I +DE HL ++LN L + + + +E D+ Sbjct: 192 FGRRGVLKNVAALVRWILKDETRHLAFGIYLLNELLKDKNKNDYKDKFRVLMEEAVDIET 251 Query: 277 -FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW 335 + + A EK +IGL+ + YV+Y+ + RM+++G D + + NP+ W Sbjct: 252 EYARVAMPEK-----------IIGLSFETYTSYVKYLADRRMRSLGFDAIYGQK-NPMKW 299 Query: 336 INT 338 + T Sbjct: 300 LTT 302 >UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta subunit n=2 Tax=Granulicatella RepID=C8NFG6_9LACT Length = 346 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 117/295 (39%), Gaps = 42/295 (14%) Query: 35 DIFEKLI-EKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPN 93 D+ +KL EK FW + VS D D++ L EK + TLLD++Q Sbjct: 42 DMIDKLTWEKLTEQFWLDTRIPVSNDLDDWRTLSPAEKDVVGKVFGGLTLLDTLQSEEGA 101 Query: 94 VALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQIQKRA 151 + + E F E++H++SY+ I + + +F+ NE +Q +A Sbjct: 102 SLMKDYVRTQHEEAVWNNIQFMESVHAKSYSTIFSTLHTKAEIEDIFEWTNNNEYLQFKA 161 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 + I+ Y S LK K+ + LE FY Sbjct: 162 KKINEIYQ--------------------------SKDALKMKV-----ASTMLETFLFYS 190 Query: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 F + + A+II+LI RDE++H T T + + G ++ E EE K Sbjct: 191 GFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYTGYK---FQQGYNELSEQE-QEEMKM 246 Query: 272 ECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 Y+L ++ Q E + ++ +G + + ++ Y N +Q +G D F Sbjct: 247 WVYNLCLELYQNEVKYTQSIY---DQVGWTEKVKV-FIRYNANKALQNLGFDPLF 297 >UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=cellular organisms RepID=Q2RUE9_RHORT Length = 358 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/321 (19%), Positives = 123/321 (38%), Gaps = 47/321 (14%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDS 86 Y+ ++Y + +KQ W EEV + D D+ + + + E+++ ++ T D Sbjct: 26 YNVERYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWASDRVSDQERNLLTQIFRFFTQSDV 85 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 + +P+ E++ + + ETIH +Y ++ + P F Sbjct: 86 EVSDNYLKRYMPIFQPLEIQMMMAAFTNMETIHIDAYA-LLLTTLGMPRTEFSAFRDYAA 144 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 ++ +A+ Y H G GT +T+ M E Sbjct: 145 MRDKAD--------------YMHTFGVGTMADVSRTLA--------------MFGAFTEG 176 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + SFA F M+G +I+ RDE+LH G + + + E + Sbjct: 177 MALFASFAMLLNFPRHNKMKGMGQIVTWSVRDESLHCQGIIRLFHEW-----NRETGALT 231 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + + D+ E+ + D F G++ G+ + + YV Y+ + R+ + L + + Sbjct: 232 KPVRDDILDVATTMVGLEEKFVDLAFELGAIEGMRAEDIKSYVRYVADWRLTQLKLPILY 291 Query: 327 -----------QTRSNPIPWI 336 Q R +P+PW+ Sbjct: 292 GHFRETEAGYEQLRPHPLPWL 312 >UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain n=68 Tax=Alphaproteobacteria RepID=B3CU68_ORITI Length = 359 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/302 (20%), Positives = 119/302 (39%), Gaps = 38/302 (12%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 K Q W PEEV ++ D D++ L EKH+ ++ T D Sbjct: 35 KAWHTQQKIHWLPEEVPLADDIKDWKYNLTPGEKHLLTQIFRFFTQADIEVNNCYMKHYA 94 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 + E++ + ++ ETIH +Y+H++ + + P + + + ++ + + + + Sbjct: 95 RVFQPTEVQMMLSAFSNMETIHIAAYSHLL-DTIGMPETEYQAFMKYKAMKDKYDYMQRF 153 Query: 158 -YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 D E+ + + G T E ++ + SFA Sbjct: 154 NVDNKEEIATTLAVFGAFT-----------------------------EGVQLFASFAIL 184 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD-PEMAEIAEECKQECYD 275 F M+G +II RDE LH T ++ L ++ + PE+ E+ K Y+ Sbjct: 185 LNFPRYNKMKGMGQIITWSVRDETLH---TNSIITLFKTFIQEYPEVW--TEQLKSRIYE 239 Query: 276 LFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW 335 E + D F G + GL + +Y+ YI + R+ +GL + NP+ W Sbjct: 240 ACCTIIHFEDAFIDLAFEVGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTW 299 Query: 336 IN 337 ++ Sbjct: 300 LD 301 >UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ8_9CAUD Length = 346 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 79/342 (23%), Positives = 135/342 (39%), Gaps = 41/342 (11%) Query: 34 YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN-LKYQTLLDSIQGRSP 92 Y F L+ K W +E ++ D D++ ++ FI L T D + + Sbjct: 22 YQEFYDLMTKHEDAHWVKQEAELGDDVNDWRNRSSDDERSFIKEILTVFTQGDVVVADNY 81 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 +P E+ W+ A E IH +Y + P +F +++++R + Sbjct: 82 KSIFIPAFKNNEVSNWLVGVAAREVIHQDAYA-MANETFGLPDSMFGRFREYQEMRERND 140 Query: 153 GISSYYD-ELIEMTSYWHLLGEG-THTVNGKTVTVSLRELKKKLYLCLMSV--NALEAIR 208 +++ YD ++E L G HT + V CLM N L+ R Sbjct: 141 LMATQYDPSMVEG------LAMGLVHTTFNEGV-------------CLMGAFANLLQFNR 181 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 F V + R +G KI + RDE +H+ G+ L + + P + + +E Sbjct: 182 FDVPGFNGY----RGRYKGLTKINKWSLRDEGIHVEGSS--LLYRKVMGEHPWL--MTDE 233 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQT 328 K++ YDL E + D F+ + + KD YV Y+ N R+ +G F+ Sbjct: 234 HKKQVYDLARAVVAAEDLFLDLAFKKYQLT-MTKDESKAYVRYMMNRRLLQLGHKAIFEV 292 Query: 329 RSNPIPWINTWLV-------SDNVQVAPQEVEVSSYLVGQID 363 + P PWI L S+ + + S LVG++D Sbjct: 293 QGIPCPWIEEILGGAGGKRDSNFFETRVDNYQASGALVGELD 334 >UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bacillaceae RepID=B1HSG7_LYSSC Length = 318 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/295 (23%), Positives = 126/295 (42%), Gaps = 52/295 (17%) Query: 49 WRPEEVDVSRDRIDYQALPEHE---KHIFISNLKYQTLLDSIQ---GRSPNVALLPLISI 102 W PEE+ VS+D +++ EH+ K +F TLLD++Q G + A + Sbjct: 27 WFPEEIAVSKDIQQWKSF-EHQDTYKKVFAG----LTLLDTVQTNIGMNRVAAYTDDLQE 81 Query: 103 PELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDE 160 + T + + E IH++SY++I + + + +F+ + NE +Q +A I+ Y+ Sbjct: 82 KAVLTVFDAF---EAIHAKSYSYIFTTLCTNEEIDELFEWVKKNEYLQYKANKIADIYNS 138 Query: 161 LIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFA 220 + E + + L+ + S LE+ FY F Sbjct: 139 IEEGDA-------------------------ESLWKAMFSSVMLESFLFYSGFFYPLYLG 173 Query: 221 ERELMEGNAKIIRLIARDEALHLTGTQHML-NLLRSGADDPEMAEIAEECKQECYDLFVQ 279 + + +A+II LI RDE++H NL + + + + E + Y+L + Sbjct: 174 GQGFLRNSAEIISLILRDESIHGVAVGFFAQNLYKQFSKEKQ-----EALQLWGYELLLD 228 Query: 280 AAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPI 333 Q E + + ++ + GL+ ++ YV Y N + VG + F + NPI Sbjct: 229 LYQNEMKYTEDIYAE---TGLSPEVKA-YVRYNANKALMNVGFEAMFPEEEVNPI 279 >UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Verrucomicrobia RepID=C0ACD0_9BACT Length = 362 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 71/320 (22%), Positives = 135/320 (42%), Gaps = 50/320 (15%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDR---IDYQALPEHEKHIFISNLKYQTLLDSI 87 Q YD++ + W PE++ + +D D +A+ + E+ I + Y + + I Sbjct: 45 QWAYDLYRTMKANH----WEPEDIPMGKDIEQWRDPRAVTDQERWIIRMGIGYFSAAEGI 100 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVT- 143 G + L++ PEL+ + A E IH+ S ++I ++ +P +F+DI T Sbjct: 101 VGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGINPHECEAMFEDIPTI 160 Query: 144 ---NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 NE + K + + D T + + L + ++L Sbjct: 161 VRKNEFVVKNSRQLRRDLD---------------------LTQPENKQLLARNMFLF--- 196 Query: 201 VNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 +E +FY F + + G ++ R RDE+ H+ +++L L ++P Sbjct: 197 GQCMEGTQFYGLFGMILSLYRQNKFPGIGQMFRYTLRDESNHIEVFRNLLMDLVE--ENP 254 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG---SMIGLNKDILCQYVEYITNIRM 317 E+ K+E + +A EK++ RD + +GL D Y++YI + R+ Sbjct: 255 EIWTPG--FKEELRETMREAVTLEKEF----IRDCLPVNAVGLAVDEFLTYIDYIADRRL 308 Query: 318 QAVGL-DLPFQTRSNPIPWI 336 + VGL + NP+PW+ Sbjct: 309 EGVGLAPISATPIKNPLPWL 328 >UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib beta subunit n=23 Tax=root RepID=A5VIB8_LACRD Length = 339 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/304 (22%), Positives = 121/304 (39%), Gaps = 50/304 (16%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 +EKL E+ FW + V+ D D++ L + + TLLD++Q + AL Sbjct: 29 WEKLTEQ----FWLDTRIPVANDMDDWRELDDDHQWTVGHVFGGLTLLDTVQSEAGLTAL 84 Query: 97 LPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQIQKRAEG 153 + P + F E++H++SY+ I + N P +F+ T E +Q +A Sbjct: 85 KEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTL-NTPDQIKEIFEWSDTEEYLQNKAVK 143 Query: 154 ISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSF 213 I++ Y + S LKKK+ LE FY F Sbjct: 144 IANMY------------------------LDPSQDPLKKKVANVF-----LETFLFYSGF 174 Query: 214 ACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL-LRSGADDPEMAEIAEECKQE 272 + + A+II+LI RDE++H T + + LR + + ++ K Sbjct: 175 YTPLYYLGHNKLNNVAEIIKLILRDESVHGTYIGYKFQVGLRDRTEKQQ-----QDMKDW 229 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS-- 330 Y+ + E+ + L+ +G D+L ++ Y N + +G D F + Sbjct: 230 MYNFLYELYDNEEKYTHLLY---DQVGWTDDVLT-FIRYNANKALMNLGQDPLFPDTASD 285 Query: 331 -NPI 333 NP+ Sbjct: 286 VNPV 289 >UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=C7NA19_LEPBD Length = 335 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 125/302 (41%), Gaps = 34/302 (11%) Query: 35 DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 D E E+ L FW E S+D + +L K ++ L TLLD++Q + Sbjct: 17 DYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVLGGLTLLDTLQSHTGMP 76 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAE 152 ++ I + + + ETIH++SY+ I + + + F + N +Q +A Sbjct: 77 KIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWVQENPHLQYKAN 136 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 I +YY ++ N + K+ + + L + LE FY Sbjct: 137 KIDTYYQKM-----------------NNPEAS------KRDIAMALAASVYLETYLFYSG 173 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 F A + M + II+ I DE++H + L + + E A++ E K+ Sbjct: 174 FFLPLWLAGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKADMRAELKKL 233 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS-N 331 YDL+ + E + D ++ D + G K +Y+ Y N + +G + F+ ++ N Sbjct: 234 MYDLY----ENETRYTDEIYGDLGLTGNVK----EYIRYNANKALMNLGFEEEFEVKNVN 285 Query: 332 PI 333 PI Sbjct: 286 PI 287 >UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6V3_SULNB Length = 337 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 74/357 (20%), Positives = 143/357 (40%), Gaps = 45/357 (12%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHI 73 L E ++ G P +++ KY + + + W P EV+ S ++ +++AL ++E+ I Sbjct: 15 LDEKIYGGSPTGFVDFNRSKYRWDSNIYDLMNANTWFPSEVNTSTEKKNFEALTDNEQSI 74 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 + + DS Q + L + +++ + E HS+SY ++ + + Sbjct: 75 YKMTFAQLSFNDSAQEEYLS-DFRRLANNRLVKSVISLQIMQEVNHSKSYA-VLLDACGN 132 Query: 134 PSVVFD----DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRE 189 VF+ D N++ + AE + Y D G + Sbjct: 133 SEEVFNLYKYDAALNKKNLQVAEQFAKYID--------------------GGSA------ 166 Query: 190 LKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE-ALHLTGTQH 248 K+ L M+ LE I F + F+ + ++ + G +I+ IARDE HL + Sbjct: 167 --DKMLLSAMASVNLEGIYFLLGFSYIYLLGDK--VPGARDMIKFIARDELNTHLPLFAN 222 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 + ++ + IA Y + A + E ++ YL ++G+ +++ Q Sbjct: 223 IFKTIQKENN------IATSTIDAAYKMIQDAVKIELEYGHYLLDQFPIMGVTHELMEQT 276 Query: 309 VEYITNIRMQAVGLDLPFQTRSNPI--PWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 V N R++ +GLD F + + L + V+ E VS+Y ID Sbjct: 277 VYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKSNFFESNVSNYAKSSID 333 >UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase small subunit 376L n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR2_IIV6 Length = 360 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/311 (18%), Positives = 120/311 (38%), Gaps = 44/311 (14%) Query: 49 WRPEEVDVSRDRIDYQALPEHEKHIFISNL-KYQTLLDSIQGRSPNVALLPLISIPELET 107 W P EV + D D++ + F++N+ ++ T D + LP +PE+ Sbjct: 30 WLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVDVASAYYTQYLPFFKLPEVTM 89 Query: 108 WVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSY 167 + +A E +H +Y++++ + P + + + E+++ + + I + D Sbjct: 90 MMGGFAGREGVHIDAYSYLLETL-GMPEATYKEFLMYEEMKDKQDYIKKFSDSR------ 142 Query: 168 WHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL-EAIRFYVSFACSFAFAERELME 226 H+LG+G + E K+ + + + E ++ + +FA F M+ Sbjct: 143 -HILGKGEENLT--------TEDKEHIAAGIALFSGFTEGMQLFSTFAMLLIFPLNGFMK 193 Query: 227 GNAKIIRLIARDEALHLTGTQHMLNLL---RSGADDPEMAEIAEECKQECYDLFVQAAQQ 283 G +I+ DE H G + + D P + +E Y + + Sbjct: 194 GMGQIVTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPSVLQET---VYKIAKEMVGL 250 Query: 284 EKDWADYLFR-----------------DGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 E+ + D +F+ + GL L Y++YI + R+ +G F Sbjct: 251 EEAFIDLVFKKYKDEPINDDNDLETKDNKDFFGLTPQRLKAYIKYIADRRLNLMGYKSIF 310 Query: 327 QTR---SNPIP 334 +NP+P Sbjct: 311 NLEPYPTNPLP 321 >UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain n=7 Tax=African swine fever virus RepID=RIR2_ASFB7 Length = 334 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/309 (20%), Positives = 126/309 (40%), Gaps = 57/309 (18%) Query: 46 SFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105 S W +EVD+ +D D++A+P+ ++ + L + + D I + + I + E+ Sbjct: 38 SLTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEV 97 Query: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELI 162 + A E +HS +Y+ ++ ++ D +F I + I+K A+ + + D Sbjct: 98 LYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSGIEKHPIIKKMAQWVRQWMD--- 154 Query: 163 EMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER 222 + LGE L+ A+E I F F E+ Sbjct: 155 ---PDRNTLGER-----------------------LVGFAAVEGILFQNHFVAIQFLKEQ 188 Query: 223 ELMEGNAKIIRLIARDEALHLTGTQHML-NLLRSGADDPEMAEIAEECKQECYDLFVQAA 281 +M G I+RDE +H + ++ N + + ++ + +I +E A Sbjct: 189 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKE-----------AV 237 Query: 282 QQEKDWADYLFRD--GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS-----NPIP 334 + ++ +Y F G + G +K++L QY+ Y T+ L Q +S NP P Sbjct: 238 ELVDEFINYAFDKARGRVPGFSKEMLFQYIRYFTD------NLCFMMQCKSIYKVGNPFP 291 Query: 335 WINTWLVSD 343 + + +++ Sbjct: 292 QMTKFFLNE 300 >UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diphosphate reductase small chain n=2 Tax=Hydra magnipapillata RepID=UPI00019243CE Length = 363 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/311 (20%), Positives = 124/311 (39%), Gaps = 49/311 (15%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 +P+N K+ + L +KQ +W EE+D S DR D+ + ++ +H L + Sbjct: 52 KPIN------SKHKVIWDLYKKQKDAYWTAEEIDFSNDRHDFLKVDKNIQHFIKRILAFF 105 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDI 141 DSI + L I++ E E E HS Y ++ I+ DP Sbjct: 106 AGADSIVNINIKKK-LSKITVKEAEIAYGFQQMMEDTHSEVYADMLIKIITDP------- 157 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 V +++ + ++S +I+ W +N K+++ ++ Sbjct: 158 VERDELINAFKTVAS-IKRMIQWAQRW---------INS----------KRRIGYSIVVF 197 Query: 202 NALEAIRFYVSFACSFAFAE---RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD 258 E + F +FA + + ++M+G + LIA+DE +H + + Sbjct: 198 CIFEGLMFSGAFAGIYWLKKILGEDIMKGLIQSNNLIAKDEGMHTIFGCVIYTFIIYRLS 257 Query: 259 DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQ 318 E+ E+ +E + C A + MIG+N +++ Y+EY+ + M Sbjct: 258 FEEICELMKEAVEICKSFTKDAICVD------------MIGMNVELMYNYIEYVADRLMV 305 Query: 319 AVGLDLPFQTR 329 +G + F T+ Sbjct: 306 YLGYEKIFMTK 316 >UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystivirus RepID=Q678G9_9VIRU Length = 374 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/322 (19%), Positives = 127/322 (39%), Gaps = 44/322 (13%) Query: 49 WRPEEVDVSRDRIDYQ--ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELE 106 W +E+ ++ D D++ L + EK L+ T LD G+ + +P+ E+ Sbjct: 91 WTEKEISLADDVTDWKIGKLLDVEKKFITQILRLFTQLDVSVGQLYHNTFIPIFKNNEIR 150 Query: 107 TWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTS 166 + ++A E H ++Y ++ + + P + + +Q+ + + +S + I + Sbjct: 151 NMLCSFACREGTHQQAYA-LLNDTLGLPESDYSAFLKYKQMTDKTDFMSDMRTDTIGNVA 209 Query: 167 YWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELME 226 + L K +Y E + + +F F +M+ Sbjct: 210 F---------------------SLVKAVYN--------EGVSLFAAFVMLLNFQRFGVMK 240 Query: 227 GNAKIIRLIARDEALHLTGTQHMLNLLRSGAD---DPEMAEIAEECKQECYDLFVQAAQQ 283 G K++ RDE +H+ G + + S + + E +QE L Sbjct: 241 GMGKVVEWSIRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKL------- 293 Query: 284 EKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSD 343 E + D +F + + L + + YV+YI R +GL + NPI W+ +WL+S Sbjct: 294 ETAFVDLVFIEDKLKNLKRVDVINYVKYILQRRTVQLGLSNKTDLQ-NPILWV-SWLISG 351 Query: 344 NVQVAPQEVEVSSYLVGQIDSE 365 E V+ Y VG ++ + Sbjct: 352 RDVTNFFENRVTEYDVGGLEGD 373 >UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subunit n=7 Tax=Ranavirus RepID=Q8QYZ8_RTRV Length = 387 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 65/314 (20%), Positives = 125/314 (39%), Gaps = 40/314 (12%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDSIQGR 90 +Y E + K W E+++ D D+++ + EK L+ T LD G Sbjct: 77 RYTWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEKAFVSCVLRLFTQLDVEVGA 136 Query: 91 SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKR 150 L + E+ + ++A E IH ++Y+ + +D + + + Sbjct: 137 LYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYS------------LLNDTLGMPDCEYQ 184 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 A + + +EMT + E + +L L + L +++ E + + Sbjct: 185 A------FADYVEMTDKLDFMREMDCS--------TLPGLARSLLRAVLN----EGVSLF 226 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 +F F M+G K++ RDE +H+ G + L S +I E K Sbjct: 227 AAFVMLLTFQRSGKMKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDIIELFK 286 Query: 271 QECYDLFVQAAQQEKDWADYLFRD-GSMIGLNKDILCQYVEYITNIRMQAVGLD--LPFQ 327 ++ + A+ E+ + D F++ G + L + YV Y+ N+R +GL + Sbjct: 287 EDAE----RVAELEEAFVDLAFQECGPVCELEPKQVKDYVLYVINLRAANMGLPKLIERA 342 Query: 328 TRSNPIPWINTWLV 341 + PIPW+ WL+ Sbjct: 343 PEACPIPWVK-WLI 355 >UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Deinococcus RepID=Q1IXG4_DEIGD Length = 319 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 63/298 (21%), Positives = 118/298 (39%), Gaps = 50/298 (16%) Query: 43 KQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI 102 +Q + W EE+ ++ D D++AL E+ + +D++QG +PL++ Sbjct: 22 QQQAQLWFSEEIPIASDAADWRALSPAERTCYTRVSAGLNAMDTLQGEVG----MPLLAA 77 Query: 103 PE----LETWVETWAFSETIHSRSYTHIIRNIV--NDPSVVFDDIVTNEQIQKRAEGISS 156 E + + +AF E +H+RSY+ + + ++ F+ I +Q++ Sbjct: 78 GEDDHQRKATLAMFAFMENVHARSYSMANKTFLSASEEREAFEWIEMQPHLQRK------ 131 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 +T + L EG L + L CL LE FY F Sbjct: 132 -------ITVFRRLYEEGD-------------ALTRMLASCL-----LETALFYSGFFYP 166 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 A + M ++ LI DEALH + + + E A + +Q + Sbjct: 167 LYLAGQGKMSHMGEVFTLICADEALHGSYVGLLFQERFAALPQGEQAAVRARFEQLAREF 226 Query: 277 FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPI 333 + + E + D ++ + +GL ++ +V Y NI +GL+ F + NP+ Sbjct: 227 Y----ENECAYTDEVYAE---VGLASEVK-TFVRYNFNICCDNLGLERLFPEEEVNPL 276 >UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=Alphabaculovirus RepID=A0EZ20_9ABAC Length = 341 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 39/280 (13%) Query: 49 WRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLI--SIPEL 105 W+ EE D+SRD D++ L E+ L + D+I N+ L+ + ++PEL Sbjct: 31 WKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASADTI----VNINLIDYVRAAVPEL 86 Query: 106 ET--WVETWAFSETIHSRSYTHIIRNIV------NDPSVVFDDIVTNEQIQKRAEGISSY 157 E + + E +HS Y+ ++ + N FD I + I+K+A+ + Sbjct: 87 EARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAFDRI---DCIKKKAQW-ALK 142 Query: 158 YDELIEMTSYW--HLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 + E YW +LG K+ KL +++ +E I F SFA Sbjct: 143 WTESKWWQDYWVDPVLGCVQRRFRNKSYP-------SKLARRMIAFAIVEGIFFSGSFAA 195 Query: 216 SFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK-QECY 274 F + LM G LI+RDE LH N I E+ Q+ Sbjct: 196 IFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYYN---------NYIPINEKLSPQQIL 246 Query: 275 DLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 +F++A EK++ ++G+N +C+Y+E++ + Sbjct: 247 SMFIEAVDIEKEFFTTAL-PCYLLGINATEMCKYIEFVAD 285 >UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Ostreid herpesvirus 1 RepID=RIR2_OSHV1 Length = 579 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 75/328 (22%), Positives = 136/328 (41%), Gaps = 58/328 (17%) Query: 26 VARYDQQ--KYDIFEKLIE---KQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKY 80 V +YD K ++++L + K S W+ E+D D ++ + E+E+ L + Sbjct: 66 VGKYDHALLKPAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAF 125 Query: 81 QTLLDSIQGRSPNVALLP-LISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFD 139 + D++ +A+ +PE + +++ +E +H R Y + + +V D + Sbjct: 126 FAVGDTLV--KDRIAIFADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYL-- 181 Query: 140 DIVTNEQIQKRAEGISSYYD-ELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCL 198 A+ +++Y D E + LG+ N + + ++ Sbjct: 182 -----------ADLVNAYKDPEFAPIKKKVDWLGKIISVENDSRGEMVVGQV-------- 222 Query: 199 MSVNALEAIRFYVSFACSFAFAE---RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRS 255 EAI F SFA F R L+ GN I RDE LH + LLR Sbjct: 223 ----CTEAIMFAASFAILLKFRAPYMRALVLGN----EFIRRDETLHF---RFYAELLRL 271 Query: 256 GADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNI 315 D P IAE L +A + E ++A+Y+ +G + KD L Q+V+ TN Sbjct: 272 MPDRPSDERIAE--------LLTEATEIELEFAEYVVPEGVKY-ITKDRLIQHVKANTNQ 322 Query: 316 RMQAVGLD-LPFQTRSN----PIPWINT 338 + + ++ + F + N P+ ++NT Sbjct: 323 VCEMLDINPIYFDQKGNVLLSPLLYMNT 350 >UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Corynebacterium phage P1201 RepID=A7IYE3_9CAUD Length = 237 Score = 40.8 bits (94), Expect = 0.077, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 10/168 (5%) Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 LE+ FY F FA + + A +IRLI RDE +H + + GA E Sbjct: 76 LESFLFYTGFYLPLHFASQGKLTNTADLIRLIMRDEGVHGYYLGYKFQKVMEGALPYERD 135 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 + E LFV ++ + L GL+ + ++ Y N MQ +GL+ Sbjct: 136 AVKERVTNLACRLFVNEIPLIEEIYEPL-------GLSAQVQT-FLRYNLNKAMQNLGLE 187 Query: 324 LPFQTRSNPI-PWINTWLVSDNVQVAP-QEVEVSSYLVGQIDSEVDTD 369 F + P I + L D+ + SSY++GQ + D D Sbjct: 188 NVFPAEMTRVEPRILSQLSVDSEETHDFFSGSGSSYVIGQAEETTDDD 235 >UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Bacteria RepID=A1XG51_BORHD Length = 321 Score = 40.8 bits (94), Expect = 0.079, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 29/197 (14%) Query: 48 FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELET 107 FW EE+ +S D++ + L E+ ++ L TLLD+ QG L I + + Sbjct: 29 FWVDEEIPISDDKLVWNTLDGEERDVYEKVLGGLTLLDTEQGSVGMPRLALAIDNLDYKP 88 Query: 108 WVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMT 165 + E +H++SY+ I ++ N + +F + T Q + + I Y+ + + Sbjct: 89 VLGFMGAMEHMHAKSYSSIFSSLSNIDRIDHIFGWVKTYRNFQDKLDLILGKYNSIHDRM 148 Query: 166 SYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELM 225 S LY L + LE FY F A + M Sbjct: 149 S---------------------------LYKALCTSVFLETFLFYSGFFYPLYLAGQGKM 181 Query: 226 EGNAKIIRLIARDEALH 242 + +II LI RDE++H Sbjct: 182 VNSGEIINLILRDESVH 198 >UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Brugia malayi RepID=A8PTX7_BRUMA Length = 288 Score = 40.8 bits (94), Expect = 0.081, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 42/92 (45%) Query: 42 EKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLIS 101 +K L+ FW +EVD+S+D D++ L + E+H L + D I + + Sbjct: 71 KKALASFWTVDEVDLSKDYRDWENLNDGERHFISRVLAFFAASDGIVNENLVNRFSQEVQ 130 Query: 102 IPELETWVETWAFSETIHSRSYTHIIRNIVND 133 +PE + E IHS Y+ +I + D Sbjct: 131 VPEARFFYGFQIMIENIHSEMYSKMIDTYIRD 162 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit b... 456 e-127 UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit bet... 432 e-120 UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit bet... 405 e-111 UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepI... 321 3e-86 UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subuni... 317 6e-85 UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 T... 316 7e-85 UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit bet... 315 1e-84 UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit bet... 313 7e-84 UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit bet... 312 1e-83 UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subun... 312 1e-83 UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 T... 311 2e-83 UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain ... 306 7e-82 UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 306 1e-81 UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subun... 303 6e-81 UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subun... 303 7e-81 UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit bet... 288 2e-76 UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=roo... 286 7e-76 UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate redu... 285 2e-75 UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit bet... 285 2e-75 UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 ... 284 3e-75 UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornu... 282 1e-74 UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_S... 280 7e-74 UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=r... 280 9e-74 UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase be... 279 1e-73 UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 ... 278 2e-73 UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subun... 276 9e-73 UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subuni... 276 1e-72 UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Ba... 274 4e-72 UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subun... 273 1e-71 UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Pr... 267 5e-70 UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Ver... 264 3e-69 UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative... 263 7e-69 UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclass... 263 7e-69 UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=... 262 1e-68 UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subuni... 262 2e-68 UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subu... 259 9e-68 UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 258 2e-67 UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD 258 3e-67 UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain ... 258 4e-67 UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subun... 258 4e-67 UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 257 5e-67 UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain ... 256 9e-67 UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subuni... 255 1e-66 UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chai... 255 1e-66 UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subuni... 254 4e-66 UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain... 254 5e-66 UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=... 253 6e-66 UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=ce... 253 8e-66 UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subun... 251 3e-65 UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprino... 249 1e-64 UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 246 1e-63 UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subuni... 245 1e-63 UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=S... 245 2e-63 UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subun... 240 7e-62 UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase sm... 236 1e-60 UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Ba... 236 1e-60 UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subu... 233 1e-59 UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subun... 228 2e-58 UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosph... 226 1e-57 UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain ... 226 1e-57 UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystiviru... 225 2e-57 UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 223 6e-57 UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase sm... 223 7e-57 UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit bet... 222 1e-56 UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain... 221 5e-56 UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain ... 217 5e-55 UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit bet... 214 4e-54 UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7... 213 6e-54 UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 213 1e-53 UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit bet... 210 7e-53 UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta sub... 207 4e-52 UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib be... 207 5e-52 UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diph... 206 2e-51 UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_... 203 8e-51 UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta sub... 202 1e-50 UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit bet... 189 1e-46 UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 T... 184 5e-45 Sequences not found previously or not previously below threshold: UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain... 219 1e-55 UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain... 207 4e-52 UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=A... 199 2e-49 UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Dei... 182 1e-44 UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Ba... 180 1e-43 UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain... 174 7e-42 UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 ... 160 5e-38 UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subuni... 160 7e-38 UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome s... 156 1e-36 UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderw... 145 3e-33 UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, s... 143 1e-32 UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Mar... 140 5e-32 UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida... 140 8e-32 UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain... 138 4e-31 UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderw... 134 4e-30 UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseud... 132 2e-29 UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclass... 129 1e-28 UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), ... 127 6e-28 UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Bru... 126 2e-27 UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Coryne... 121 3e-26 UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain... 121 3e-26 UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium ... 119 2e-25 UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyos... 117 9e-25 UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH 112 2e-23 UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain... 109 2e-22 UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Envi... 108 3e-22 UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes a... 108 3e-22 UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepI... 107 7e-22 UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib be... 106 2e-21 UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative ... 105 2e-21 UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain ... 105 3e-21 UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subun... 105 4e-21 UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=M... 99 2e-19 UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment... 97 1e-18 UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepI... 94 1e-17 UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC... 89 2e-16 UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain ... 87 7e-16 UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n... 86 2e-15 UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus Rep... 84 7e-15 UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subuni... 83 1e-14 UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae... 82 2e-14 UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=G... 82 5e-14 UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theil... 81 5e-14 UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=C... 81 7e-14 UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Ge... 78 6e-13 UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomy... 77 7e-13 UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sa... 75 4e-12 UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain... 75 5e-12 UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomyc... 74 8e-12 UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae Rep... 70 1e-10 UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Su... 70 1e-10 UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subuni... 69 2e-10 UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome s... 69 3e-10 UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like prote... 69 4e-10 UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomy... 68 6e-10 UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolo... 66 2e-09 UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS 65 5e-09 UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena t... 64 1e-08 UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexiba... 63 1e-08 UniRef50_D2S309 Ribonucleotide reductase beta subunit-like prote... 62 3e-08 UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema m... 59 3e-07 UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenul... 57 8e-07 UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Con... 55 4e-06 UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment... 55 5e-06 UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, s... 54 8e-06 UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 T... 54 8e-06 UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus... 51 7e-05 UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, s... 50 2e-04 UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, b... 47 0.001 UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, b... 45 0.003 UniRef50_A4CGF1 2-oxoglutarate dehydrogenase, E1 component n=27 ... 44 0.007 >UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit beta n=294 Tax=root RepID=RIR2_ECO57 Length = 376 Score = 456 bits (1173), Expect = e-127, Method: Composition-based stats. Identities = 376/376 (100%), Positives = 376/376 (100%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR Sbjct: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS Sbjct: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG Sbjct: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA Sbjct: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL Sbjct: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDSEVDTDDLSNFQL Sbjct: 361 QIDSEVDTDDLSNFQL 376 >UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit beta n=58 Tax=root RepID=RIR2_HAEIN Length = 376 Score = 432 bits (1112), Expect = e-120, Method: Composition-based stats. Identities = 321/376 (85%), Positives = 346/376 (92%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQ KNDQLKEPMFFGQ VNVARYDQQKY+ FEKLIEKQLSFFWRPEEVDVS+DR Sbjct: 1 MAYTTFSQNKNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDY ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPL+SIPELETW+ETW FSETIHS Sbjct: 61 IDYAALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPS+VFDDIVTNE+I KRA+ ISSYYD+LI + + L GEGT+TV+G Sbjct: 121 RSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYGLYGEGTYTVDG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K V+LR LKK+LYLCLMSVNALEAIRFYVSFACSFAFAER LMEGNAKII+ IARDEA Sbjct: 181 KECVVTLRSLKKQLYLCLMSVNALEAIRFYVSFACSFAFAERRLMEGNAKIIKFIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQH+LN++ +G DDPEMAEIAEECKQE YDLFV AA+QEK WADYLF+DGSMIGL Sbjct: 241 LHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N+DIL QYVEYITNIRMQAVGL LPFQTRSNPIPWIN WLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDS+VDT+D +F L Sbjct: 361 QIDSKVDTNDFDDFSL 376 >UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit beta n=48 Tax=root RepID=RIR2_BUCBP Length = 376 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 275/376 (73%), Positives = 333/376 (88%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M YTTFS+ KN+QL EPMFFGQ VN++RYDQQKY+IFEKLIEKQLSFFWRPEEVD+SRD Sbjct: 1 MTYTTFSKNKNNQLYEPMFFGQSVNISRYDQQKYEIFEKLIEKQLSFFWRPEEVDLSRDY 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 ID+Q LP+HEKHIF+SNLKYQTLLDSIQGRSPN+ALLP++S+PELETW+ETW+FSETIHS Sbjct: 61 IDFQNLPQHEKHIFVSNLKYQTLLDSIQGRSPNIALLPIVSLPELETWIETWSFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNI+N PS++FDDI+ N+ I RA+ I+ YYD+LIE+TSYWHL GEG HT+NG Sbjct: 121 RSYTHIIRNIINTPSLIFDDIIDNKNIANRAKDIAKYYDDLIELTSYWHLFGEGKHTING 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K + + L ELKKKLYLCL+SVNALEAIRFYVSFACSFAFAERE MEGNAKIIRLIARDEA Sbjct: 181 KKIKIDLHELKKKLYLCLISVNALEAIRFYVSFACSFAFAEREKMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLT TQH+LN+L + ++ M++I++EC +ECY LF++ + QEK WA YLF++GSM+GL Sbjct: 241 LHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGSMLGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N++IL QY+EYITNIRM+A+GL PF+ SNPIPWIN+WL+SDNVQVAPQE+ VSSYL+G Sbjct: 301 NQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWINSWLISDNVQVAPQEISVSSYLIG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QI+SE++ D F+L Sbjct: 361 QINSEINDSDFEKFKL 376 >UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepID=D1BPH6_VEIPT Length = 342 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 91/371 (24%), Positives = 172/371 (46%), Gaps = 37/371 (9%) Query: 5 TFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F++ D+ + M G N+ +++ KYD ++ L+ FW PEE+ ++ D + Sbjct: 6 IFNENG-DRGTQSMIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDVKQFP 64 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L ++E+ F + + LDSIQ + L I+ E+ + + AF E IH++SY+ Sbjct: 65 YLTDYERRAFDKIIAFLNFLDSIQSENL-PNLSRYITASEVASLLNIQAFQEEIHAQSYS 123 Query: 125 HIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +I+ + N ++D+ T++ + +R I+ Y + S +L+ Sbjct: 124 YILDTVTNPITRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEANLIHT--------- 174 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 +++ LE I FY F+ + A + M + I + I RDE H Sbjct: 175 ---------------IIANYILEGIYFYSGFSFFYTLARQGKMTATSTIFKYINRDEVTH 219 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 L Q+++ LR D E + + D+ Q A+ E W Y+ D ++GLN Sbjct: 220 LVLFQNIIRELRRERPD----LFTPELEAKITDMIRQGAENEIAWGQYITDD-KILGLNN 274 Query: 303 DILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ +Y++Y+ NIR++A+GL + + + NP+ WI ++ ++ + E +V++Y Sbjct: 275 VLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKAA 334 Query: 362 IDSEVDTDDLS 372 D DDL Sbjct: 335 ---AFDFDDLE 342 >UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67SN7_SYMTH Length = 346 Score = 317 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 91/366 (24%), Positives = 160/366 (43%), Gaps = 35/366 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + D K + G P N+ KY+ +KL + L FW PEEV + D Y L Sbjct: 14 HGERDWGKRRIIGGNPTNIMELTNVKYEWAQKLSDIMLRNFWIPEEVPLLDDAKQYLELT 73 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 E+ + L + +DSI S L+ ++ PE+ + F E +HS+SY +++ Sbjct: 74 ADEQWAYDRMLSFVIFMDSILTVS-MPNLINYVTAPEINMCLSIHNFHEALHSKSYGYVL 132 Query: 128 RNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 ++V ++D + Q+ +R I++ + + + H Sbjct: 133 ESVVPAERRQYIYDLWREDRQLLERNRYIANTFQLFADNPTDEH---------------- 176 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 M+ LE I FY FA +A A M+G A I+ I RDE H+ Sbjct: 177 --------FVRACMAQYVLEGIYFYSGFAFFYALARMGKMKGTATEIQFINRDEITHVAV 228 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 Q++LN LR + P++ + + + QAA+ E WA Y + + GL+ ++L Sbjct: 229 FQNILNGLRQ--ERPQL--FTPQLDADLRAMIRQAAEHEMAWAAYCVGN-RIQGLSGEVL 283 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSE 365 YV+++ + R +A+G + + NPI W+ ++ + + E V++Y + Sbjct: 284 QGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKS---TN 340 Query: 366 VDTDDL 371 +D DDL Sbjct: 341 IDLDDL 346 >UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI5_9CAUD Length = 367 Score = 316 bits (810), Expect = 7e-85, Method: Composition-based stats. Identities = 160/367 (43%), Positives = 214/367 (58%), Gaps = 14/367 (3%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 ++ F + N+ FFG PV++ RYD + +K EK LS FWRPEEVD+++D+ D Sbjct: 7 FSVFDPSSNNTG--LPFFGDPVSIQRYDIVAWPFVQKWYEKGLSQFWRPEEVDITKDKAD 64 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 Y L EK I+ SNLK QT+LDSIQG +P A P S PE++ V W E IHS S Sbjct: 65 YATLTPAEKRIYESNLKRQTMLDSIQGAAPFEAFGPWASTPEMQFAVLEWTRQEAIHSLS 124 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 YTHI+RN VNDP +VFD ++ +I A IS++YD+++ + G Sbjct: 125 YTHILRNTVNDPGIVFDHVLDVAEIVDCAHQISTHYDDMVRYS--------GMRMAGRAF 176 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEAL 241 + K+ + L + N LE IRFYVSFACS+AF + ++ MEGNAKIIR IARDE Sbjct: 177 TREDIMNAKRAFWRALFAANTLEGIRFYVSFACSWAFTQFQKKMEGNAKIIRQIARDEQD 236 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL TQ +LN L DP+ I EE + E +F+ QEK WADYLF+DGSM+GLN Sbjct: 237 HLILTQTLLNRL--PGMDPDFEIIREELRGEMTQMFLDVGNQEKQWADYLFQDGSMLGLN 294 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQT-RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 IL V+++ RM A+G P + + P+PWIN WL + +Q A QE E YL+G Sbjct: 295 AKILHHMVDWLLTHRMGAIGHPYPGEPRKECPVPWINEWLNNKTMQYALQEAEAPDYLMG 354 Query: 361 QIDSEVD 367 + V Sbjct: 355 VLTGSVS 361 >UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Epsilonproteobacteria RepID=RIR2_HELPJ Length = 341 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 85/358 (23%), Positives = 163/358 (45%), Gaps = 30/358 (8%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + + +F G P ++ ++ KY + L + L+ W EEV ++ D+ DY L Sbjct: 12 NSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLS 71 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 EK + L +DS+Q + + P I+ PE+ + A+ E +HS +Y ++ Sbjct: 72 AEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMV 131 Query: 128 RNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 +I + ++D + Q++ + + I+ Y EL + + Sbjct: 132 ESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTE-------------------- 171 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 + + L + LE I FY F+ + A M G+A++IR I RDE HL Q Sbjct: 172 ----ENILKALFANQILEGIYFYSGFSYFYTLARSGKMLGSAQMIRFIQRDEVTHLILFQ 227 Query: 248 HMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQ 307 +M+N LR+ D + E ++F +A + E W DY+ + G ++GL ++ Q Sbjct: 228 NMINALRNERAD----LFTPQLINEVIEMFKKAVEIEASWGDYITQ-GKILGLTSSLIEQ 282 Query: 308 YVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSE 365 Y++++ + R+ VG+ + + +PI W+ ++ + + E VS+Y G + + Sbjct: 283 YIQFLADSRLSKVGIAKVYGVQ-HPIKWVESFSSFNEQRSNFFEARVSNYAKGSVSFD 339 >UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit beta n=80 Tax=Bacteria RepID=RIR2_TREPA Length = 351 Score = 313 bits (801), Expect = 7e-84, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 156/362 (43%), Gaps = 36/362 (9%) Query: 6 FSQTKNDQL-KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F++ + +L K M G N+ ++ KY K + ++ FW PEE+++S D DY+ Sbjct: 14 FNEAGDIELHKRRMVGGNTTNLNDFNNMKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYR 73 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L EK + L + LDSIQ + + I+ E+ + AF E +HS+SY+ Sbjct: 74 NLSAIEKTAYDKILSFLIFLDSIQTANL-PNIGQYITANEINLCLTIQAFQEAVHSQSYS 132 Query: 125 HIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +++ I + + +E + R + I + Y+E + S Sbjct: 133 YMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFQDDKSVL-------------- 178 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L ++ LE I FY F + M G+ + IR I RDE H Sbjct: 179 ----------ALLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENTH 228 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 L + ++ L+ ++P++ + D+ + +QE W DY+ D + GLN+ Sbjct: 229 LWLFRSIIQELQK--EEPQV--FTARNVRLFRDMIREGCEQEIKWGDYVIGD-QIPGLNR 283 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 ++ Y+ Y+ N+R + +G + ++ + W++ + ++ ++ E + ++Y Sbjct: 284 HMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYAK 343 Query: 360 GQ 361 Sbjct: 344 SS 345 >UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit beta n=4 Tax=Campylobacterales RepID=C3XIX4_9HELI Length = 351 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 88/361 (24%), Positives = 172/361 (47%), Gaps = 30/361 (8%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + + +F G P + ++ KY L+ + W PEEV++++D+ DY L Sbjct: 21 HSTESVNERRIFGGNPTAIFELNKIKYQWAYNLLRTMFANTWFPEEVNMNQDKRDYMELT 80 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 EK + L +DS+Q + + P I+ PE+ + AF E++H++SY ++ Sbjct: 81 LQEKQGYDRALAQLIFMDSLQTNNLTDNINPYITCPEINMLLVRQAFEESLHAQSYAVMV 140 Query: 128 RNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 +I + ++ +++++ + + I+ Y +L + + +L+ Sbjct: 141 DSISANTDEIYQMWRKDDKLRSKNDYIADVYTDLAKNPTETNLI---------------- 184 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 + + LE I FY FA + A M+ +A++IR I RDE HLT Q Sbjct: 185 --------KAMFANQILEGIYFYSGFAFFYTLARSGKMQNSAEMIRFIQRDEITHLTIFQ 236 Query: 248 HMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQ 307 M+ + + + P++ + + E ++F QA E W +Y+ + G ++GL I+ Q Sbjct: 237 QMI--ISTRKERPDL--FTQALQDEVMEMFRQAVDLESSWGEYITQ-GQILGLTAKIIRQ 291 Query: 308 YVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 Y+EY+ + R++AV + + T+ NPI W++ + +N + E +V +Y G++ E D Sbjct: 292 YIEYLADKRLKAVDYPILYNTQ-NPIQWVDEQVNFNNQRTNFFEAKVRNYTRGELKFEDD 350 Query: 368 T 368 Sbjct: 351 F 351 >UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Firmicutes RepID=C9LBQ7_RUMHA Length = 359 Score = 312 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 81/358 (22%), Positives = 161/358 (44%), Gaps = 35/358 (9%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPE 68 D M G N+ ++ +Y + + ++ FW PEE+++S+DR DY L Sbjct: 26 GDTDVRFRRMIGGNTTNLNDFNNMRYGWVKGWYRQAMNNFWIPEEINLSQDRKDYGELLG 85 Query: 69 HEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 E+ + L + LDSIQ + + I+ E+ + F E +HS+SY++++ Sbjct: 86 KERQAYDKILSFLVFLDSIQSANL-PCIGEYITANEINLCLSIQTFQECVHSQSYSYMLD 144 Query: 129 NIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVS 186 I + + + T+E++ KR I Y+E Sbjct: 145 TICSPEKRNEILYQWKTDERLLKRNTFIGELYNEF------------------------Q 180 Query: 187 LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGT 246 +++ L +M+ LE I FY F + + M G+A+ IR I RDE HL Sbjct: 181 MKKDSFTLLKVMMANYILEGIYFYSGFMFFYNLSRNGKMPGSAQEIRYINRDENTHLWLF 240 Query: 247 QHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILC 306 ++M+ L+ ++PE+ +E Q ++ ++ +QE W Y+ D + G++K+++ Sbjct: 241 RNMILQLKE--EEPEL--FTKENIQALKEMLMEGVEQEIAWGHYVLGD-DIPGISKEMIT 295 Query: 307 QYVEYITNIRMQAVGLD---LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 +Y++Y+ N+R +G D ++ + W++ + ++ V+ E + ++Y Sbjct: 296 EYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYAKST 353 >UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 Tax=root RepID=Q7Y4S0_BPR69 Length = 390 Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats. Identities = 179/387 (46%), Positives = 242/387 (62%), Gaps = 15/387 (3%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 T F+ + D L EPMFFG + +ARYD Q++ +FE+LIE LSFFWRPEEV++ D Sbjct: 2 STVFNTQQVDVLNEPMFFGSGLGLARYDIQRHKVFEELIEI-LSFFWRPEEVNLMLDSAQ 60 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 + LP+ ++ I +NLKYQ+LLDSIQGR+P+ L+ LIS P L+TWV TW FSETIHSRS Sbjct: 61 FNKLPQFQQDICTNNLKYQSLLDSIQGRAPSAVLMALISDPSLDTWVATWTFSETIHSRS 120 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 YTHI+RN+ DPS VFD+IV +E I KRAE I YYD+++ T W E G Sbjct: 121 YTHIMRNLYTDPSKVFDEIVLDEAIMKRAESIGKYYDDVLVKTRNWENAKEVYECSIGSC 180 Query: 183 VTVS-----------LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER-ELMEGNAK 230 R+L K LYLCL +NALEAIRFYVSFAC+F F + E+MEGNAK Sbjct: 181 QQNDIEMYEEIMFNAKRDLMKSLYLCLHVINALEAIRFYVSFACTFNFHKNMEIMEGNAK 240 Query: 231 IIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADY 290 I++ IARDE LHL + ++ + ++ + + K+WA + Sbjct: 241 IMKFIARDEQLHLRVLSTLSVNFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKYKEWAAH 300 Query: 291 LFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF--QTRSNPIPWINTWLVSDNVQVA 348 LF+DG+ G+N +C +V+Y+T RM+ GL P +P PWI +L SD VQ A Sbjct: 301 LFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLNSDLVQAA 360 Query: 349 PQEVEVSSYLVGQIDSEVDTDDLSNFQ 375 PQEVE+SSYLV QID++VD + +++++ Sbjct: 361 PQEVEISSYLVAQIDNDVDQNVINSYK 387 >UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain n=43 Tax=Bacteria RepID=B4E5V8_BURCJ Length = 403 Score = 306 bits (784), Expect = 7e-82, Method: Composition-based stats. Identities = 84/359 (23%), Positives = 154/359 (42%), Gaps = 28/359 (7%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA- 65 ++ + + + + GQ +V + KY + + W P+E+++SRD ++ Sbjct: 64 TEARVNVADKRIINGQ-TDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDP 122 Query: 66 --LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 L E E+ I NL + DS+ + + I+ PE ++ AF E IH+ +Y Sbjct: 123 NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 182 Query: 124 THIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 +I+ ++ D +F+ I+ + E + + HT+ Sbjct: 183 QYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFI-----------------HTLTDPAF 225 Query: 184 TVSLRELKKKLYLCLMSVNA-LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 E +KL L+ +E + FYV F A + M G A+ + I RDE++H Sbjct: 226 KTGTLEADQKLLKSLIVFACIMEGLFFYVGFTQILALGRQNKMTGAAEQYQYILRDESMH 285 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 ++N ++ ++P + E + E +LF QA + E +A+ G ++GLN Sbjct: 286 CNFGIDLINQIK--LENPHLW--TAEFRAEIRELFKQAVELEYRYAEDTMPRG-VLGLNA 340 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 + Y+ +I+N R Q +GLD F NP PW++ ++ + E V Y G Sbjct: 341 SMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSE-MIDLKKERNFFETRVIEYQTGG 398 >UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C8WWZ0_ALIAD Length = 369 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 167/368 (45%), Gaps = 36/368 (9%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQAL 66 ++ D K + G N+ + KY+ KL ++ FW PEE+ ++ D Y L Sbjct: 35 AEGDRDWGKRRIIGGNTTNMIELNNIKYEWAYKLYRAMMNNFWIPEEIPLADDARQYDLL 94 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 + E+ + L + +DS+ + + I+ PE+ + AF E +HS+SY ++ Sbjct: 95 SDDERRSYNKVLSFLIFMDSLLTHNL-PNINEYITAPEVNLCLTVHAFQEAVHSQSYGYV 153 Query: 127 IRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 + ++VN ++++ ++ + +R + I+ ++E IE + Sbjct: 154 LDSVVNPATRDQIYNEWRNDDHLLRRNQFITDLFEEFIENPTD----------------- 196 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 + L +++ LE + FY F F + M G I+ I RDE HL Sbjct: 197 -------RNLMKTIVANYILEGVYFYAGFGFFFVLGRQGKMLGTVSEIKFIQRDELTHLA 249 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 +++ + + + + ++E ++ A Q E W Y+ + G ++GL + Sbjct: 250 IFRNLYHEIIRENP----GIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQ-GKIVGLTDAL 304 Query: 305 LCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + Y++Y+ N+R+Q++ L + + + + +P+PW++++ ++ + E V++Y Sbjct: 305 IDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA--- 361 Query: 364 SEVDTDDL 371 ++ DDL Sbjct: 362 GNLNWDDL 369 >UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB3_9FIRM Length = 347 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 151/359 (42%), Gaps = 35/359 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + D + + G N+ ++ KY + ++ FW PEE+++ +D DY+ LP Sbjct: 13 EGDIDVTQRRLIGGNTTNMNDFNNLKYTWTADWYRQAMNNFWIPEEINLGQDVKDYRQLP 72 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 E+ + L + LDS+Q + + I+ E++ + +F E +HS+SY++++ Sbjct: 73 AAERRAYDKILSFLVFLDSVQSANL-PNVSAYITANEVDLCLTIQSFQECVHSQSYSYML 131 Query: 128 RNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 I + + + +E + R I Y+E + Sbjct: 132 DTIASPDERQEIIFQWKDDEHLLARNTFIGDLYNEFQQ---------------------- 169 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + ++ L++ LE I FY F + M G+ + IR I RDE HL Sbjct: 170 --EQSRENFLRVLIANYILEGIYFYSGFMFFYNLGRIGRMPGSVQEIRYINRDENTHLWL 227 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 +++L LR+ D E ++ ++ + +QE W Y + + GLN+ ++ Sbjct: 228 FRNILRDLRAEEPD----LFTPEREEMMREMIREGVRQEIAWGKYAIGN-EVEGLNEKMI 282 Query: 306 CQYVEYITNIRMQAVGLDLPF---QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 YV Y+ N R +++GL + + + + W++ + + ++ E ++Y Sbjct: 283 EDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYAKST 341 >UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subunit n=2 Tax=Eukaryota RepID=A8IKH1_CHLRE Length = 493 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 134/363 (36%), Gaps = 49/363 (13%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHI 73 L E + P + KY + ++ ++ FW EEVD + D ID+ L E+ Sbjct: 165 LDEDLLRENPNRFTLFP-IKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRF 223 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 L + D I + + I +PE + E +HS Y+ ++ + V + Sbjct: 224 IKYVLAFFAASDGIVMENLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVRE 283 Query: 134 PSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 P +FD I T + K+AE + Sbjct: 284 PEERNQLFDAIHTIPTVAKKAEWAMRWISS------------------------------ 313 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 L+ +E I F SF F +R LM G + LI+RDE LH + Sbjct: 314 SNVFAERLVGFACVEGIHFSGSFCSIFWLKKRCLMPGLSFSNVLISRDEGLHCDFACCLY 373 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + L++ ++ + +A Q E ++ ++G+N D++ QY+ Sbjct: 374 SHLKNRLS-----------RERVLQIVDEAVQLEDEFCTEALS-CELLGMNADLMRQYIR 421 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 ++ + + ++G + + TR NP W+ ++S + E V Y + + + Sbjct: 422 FVADRLLVSLGYEKHYNTR-NPFDWME--MISLQGKANFFERRVGEYQRAGVMGGNNGNS 478 Query: 371 LSN 373 + Sbjct: 479 ARD 481 >UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit beta n=13 Tax=Bacillales RepID=RIR2_BACHD Length = 345 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 77/367 (20%), Positives = 155/367 (42%), Gaps = 35/367 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 T + G+ NV +D ++ L + L+ FW P E+++S D + L Sbjct: 11 DTTASNASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLT 70 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 E E+ F + LDS+Q ++ ++ L + +F E +H++SY++++ Sbjct: 71 ETEQEAFKKIIGLLAFLDSVQTD-YSMRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVL 129 Query: 128 RNIVND--PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 ++V +F+ ++ +++R E I Y++ ++ + Sbjct: 130 SSLVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPT------------------- 170 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 K ++ LE + FY FA + A + M + +I I RDE LH+ Sbjct: 171 -----PKTFLESIVYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRDEQLHVYL 225 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 ++ L + EE K ++AA EKDW Y+ D + G+N + + Sbjct: 226 FTNIFKELLVEFPE----LNTEETKTFVKTTLMKAADLEKDWFRYIIGD-KIPGINPEDM 280 Query: 306 CQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDS 364 Y+ +I N R +G++ P+ + + NP+ WI + ++ + E + Y ++ + Sbjct: 281 ETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQY--AKVSA 338 Query: 365 EVDTDDL 371 + D+L Sbjct: 339 DNGFDEL 345 >UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=root RepID=C4L4U4_EXISA Length = 346 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 81/371 (21%), Positives = 161/371 (43%), Gaps = 37/371 (9%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 K+ + G+ ++ ++ Y F + ++ LS FW P+E+ +S+D + Sbjct: 8 LLSPKHPNRATAIIGGETSSIVNWNDIAYPQFYTIYKQLLSNFWIPDEISMSKDMQQWPQ 67 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L E E+ F + ++LDS+Q R + + + + A E +H++SY++ Sbjct: 68 LTEREQDAFKRIIGLLSILDSVQTRYILESSMFSSDS-SVHAVLAVIAQQEVVHNQSYSY 126 Query: 126 IIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 ++ ++V + + +F+ +E + KR + I Y+ E + Sbjct: 127 VLSSLVPLAEQNRIFNIAKDDEMVMKRNQFILDLYEAFRETPN----------------- 169 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 + L++ LE I FY FA + A + M G + +I I RDE H Sbjct: 170 -------AENFAKSLVASVILEGINFYSGFAYFYNLARHQKMVGTSTMISYIQRDEMQHS 222 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 +L + + ++P++ E + Q YD +A E +W +Y+ RD + GL+ Sbjct: 223 YFISQLLRAVLT--ENPKIDENG-QFSQFVYDTMAEAVDLEIEWCEYVLRD--LDGLDVS 277 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQT-RSNPIPWINTWLVS--DNVQVAPQEVEVSSYLVG 360 + YV+Y+ N R++ +GL+ ++ + +PWI + + + E + SY Sbjct: 278 EMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSDFFEQKSRSY--A 335 Query: 361 QIDSEVDTDDL 371 ++ DDL Sbjct: 336 KVTDANGFDDL 346 >UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate reductase, small subunit n=2 Tax=Siphoviridae RepID=Q6QGJ3_BPT5 Length = 381 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 117/377 (31%), Positives = 206/377 (54%), Gaps = 11/377 (2%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 TT D + +F G + +A Y + + E+L S FW E+ + D+ + Sbjct: 2 TTLLNLNWDHTNKDLFLGDSLGIADYVRVAHPELERLALLARSQFWTETEISLEADKKQW 61 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 LP + I + NL +QT DS R+P A++PL+S PELE ++ W++ E +HSR+Y Sbjct: 62 PNLPREIQEITLLNLAWQTQTDSFISRAPEAAIMPLVSRPELEGMLKQWSYFEDLHSRAY 121 Query: 124 THIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGE--GTHTVNGK 181 ++IIRN++ DP+ D + N++ R +DEL ++ Y+ + + G +T Sbjct: 122 SNIIRNVLTDPAEFIDSVTKNQEAFARIADSVELFDELYQLGQYFIAVRDHRGDNTYPET 181 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 RE + KL ++ LEA++FY SFAC+FA AE ++++G AK ++LIA+DEAL Sbjct: 182 EFPEVKRETQAKLLDAYFAIYGLEAMQFYASFACTFALAENDILQGIAKNLQLIAKDEAL 241 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H ++ ++ ++ D ++ +E + ++ + E +W ++F+ S+IGLN Sbjct: 242 HTQMSKAIIQIMFQQFD----KDLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLN 297 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVS-SY 357 ++L +Y+ ++ +G++ P NPIPWI WL + ++Q APQE+++ +Y Sbjct: 298 AELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDTTSLQPAPQEIQIGAAY 357 Query: 358 LVGQIDSEVDTDDLSNF 374 VGQ+ +E TD L + Sbjct: 358 RVGQV-TETSTDTLKDL 373 >UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit beta n=182 Tax=cellular organisms RepID=RIR2_CHLTR Length = 346 Score = 285 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 150/354 (42%), Gaps = 27/354 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-- 65 Q + + + + V+V + KY + + W P E+ + +D +++ Sbjct: 10 QKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDR 69 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L E E+ + + NL + + +S+ G + +A+ ++ PE ++ AF E +H+ ++ + Sbjct: 70 LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLY 129 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 I ++ D +F+ I+ + + E T V Sbjct: 130 ICESLGLDEKEIFNAYNERAAIKAKDDFQM-----------------EITGKVLDPNFRT 172 Query: 186 SLRELKKKLYLCLMSVN-ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 E ++ L+ +E I FY F +F + M G + + I RDE +HL Sbjct: 173 DSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLN 232 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 ++N ++ ++PE+ E +QE +L +A E ++A G ++GL + Sbjct: 233 FGIDLINGIKE--ENPEIW--TPELQQEIVELIKRAVDLEIEYAQDCLPRG-ILGLRASM 287 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 YV++I + R++ +GL + T+ NP PW++ + + + E V Y Sbjct: 288 FIDYVQHIADRRLERIGLKPIYHTK-NPFPWMSETIDLNKEK-NFFETRVIEYQ 339 >UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 n=93 Tax=root RepID=RIR2_HUMAN Length = 389 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 136/360 (37%), Gaps = 48/360 (13%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 EP+ P + + +DI++ + +K + FW EEVD+S+D +++L E++ Sbjct: 69 DEPLLRENPRRFVIFPIEYHDIWQ-MYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + I E + E IHS Y+ +I + DP Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 +F+ I T ++K+A+ + + + Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGD-----------------------------KE 218 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 +++ A+E I F SFA F +R LM G LI+RDE LH M Sbjct: 219 ATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFK 278 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 L + + ++ + A + E+++ +IG+N ++ QY+E+ Sbjct: 279 HLVHKPSE-----------ERVREIIINAVRIEQEFLTEALP-VKLIGMNCTLMKQYIEF 326 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + + M +G F+ NP ++ +S + E V Y + S + Sbjct: 327 VADRLMLELGFSKVFRVE-NPFDFMEN--ISLEGKTNFFEKRVGEYQRMGVMSSPTENSF 383 >UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPK4_PHATR Length = 409 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 68/342 (19%), Positives = 134/342 (39%), Gaps = 49/342 (14%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQGR 90 ++D + ++ ++ FW +E+D+S D D+ + L ++E+H L + D I Sbjct: 99 IEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLAFFAGADGIVVE 158 Query: 91 SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQI 147 + +++PE + E IH +Y +I + ++DP ++F + Sbjct: 159 NLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFAAHTKVPSV 218 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +K+A Y L++ A+E I Sbjct: 219 EKKARWAQRYI------------------------------GSDASFAERLVAFAAVEGI 248 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 F +F F +R LM G LI+RDE LH + + + L + +M + Sbjct: 249 FFSGAFCSIFWLKKRGLMPGLTFSNELISRDEGLHCSFACQLYSKLERKLSETDMHK--- 305 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 L +A + EK + G +IG+N ++ QYVE++ + + +G + Sbjct: 306 --------LIGEAVEVEKGFVCDALPVG-LIGMNASLMSQYVEFVADRLLHDLGYRTLYG 356 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 ++ NP W++ ++S + E V Y + + + D Sbjct: 357 SK-NPFDWMD--MISLEGKTNFFEKRVGEYQKSGVMASLSDD 395 >UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_SYNY3 Length = 355 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 170/372 (45%), Gaps = 44/372 (11%) Query: 5 TFSQTKNDQL-KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ T ND + ++FG N+ + + +Y+ L ++ FW P+ +D+++D DY Sbjct: 17 IFNPTGNDSVENRTIWFGNTTNLMQLNDVRYNWAVGLYQQMRENFWIPQRLDITQDVTDY 76 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 L E++ F L Y T LDS+Q + L ++ PE+ + E +H++SY Sbjct: 77 WNLTNEERYAFDGILSYLTFLDSVQTCNI-PHLKSSVTAPEISLCMAEQISQEGMHNQSY 135 Query: 124 THIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 ++I I+ V++ T+ +++R E I+ Y + ++ + Sbjct: 136 QYMIETIIPTEKRDKVYEFWRTDRVLKERCEYIAMLYQKYVDHPT--------------- 180 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 ++ ++ LM+ LE + FY F + A R LM G+A I ++I RDE Sbjct: 181 ---------QENYFIALMADYLLEGLYFYNGFIYFYNLASRMLMPGSADIFKMINRDELS 231 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H+ Q ++ PE ++ + Y++F +A + E W +++ + +++G+ Sbjct: 232 HVRLYQKLI---------PEAMQVFTHSTDQIYEMFDKAVEFECRWTNHIVGN-NILGIT 281 Query: 302 KDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDN-----VQVAPQEVEVS 355 + QY +Y+ N R++A+GLD + R P+ + SD + E V+ Sbjct: 282 ESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEAHTKANFFEATVT 341 Query: 356 SYLVGQIDSEVD 367 SY++ S D Sbjct: 342 SYVMSSGVSGWD 353 >UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=root RepID=B7GK18_ANOFW Length = 345 Score = 280 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 79/375 (21%), Positives = 155/375 (41%), Gaps = 36/375 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + + + G+ + ++ KY F + + L FW P E+++S D Sbjct: 3 LTKVKLLEPSHPNKATSIINGKASGILNWNDIKYSHFYDIYKMLLGNFWTPFEINMSDDI 62 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + AL E E+ F+ + ++LDS+Q A+ I+ P ++ E +H+ Sbjct: 63 KQWHALSERERDAFLHIIGLLSILDSVQPNFIG-AMKEYITDPSVKAIFSIIEQQEVVHN 121 Query: 121 RSYTHIIRNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ +I +++ F+ TN I KR E + Y+ E + Sbjct: 122 QSYSYVLASIEKLSEQHRAFEMARTNPHIYKRNEHVIRVYEAFREQPT------------ 169 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++ LE I FY FA + A + M + +I I +D Sbjct: 170 ------------VETFCRALVASLVLEGINFYSGFAFFYNLARNQKMLKTSTMISYINKD 217 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H ++ + ++P++ E YD +A + E +W+ ++ RD + Sbjct: 218 ELCHSYFISQLVRAVL--WENPQIDENGA-FSAWIYDYIDEAIRYETEWSRFVLRD--ID 272 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL--VSDNVQVAPQEVEVSS 356 G++ + +Y+EY+ N R++ +GLD + N +PWI + + + E S Sbjct: 273 GIDVIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGKTDFFEARPRS 332 Query: 357 YLVGQIDSEVDTDDL 371 Y D+L Sbjct: 333 YTK--TTDVNGFDEL 345 >UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase beta chain n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QU02_9CAUD Length = 365 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 102/371 (27%), Positives = 180/371 (48%), Gaps = 18/371 (4%) Query: 1 MAYTTFSQTKNDQLKE--PMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSR 58 M+ T F+ + L P+F GQP+ + + Y L ++Q + W +EV++ Sbjct: 1 MSSTVFNHKNDAYLTASYPLFMGQPLAMYDSMNKIYPELFDLYKQQKAQDWSEDEVNLEN 60 Query: 59 DRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 RID+Q + E + I NL +Q DS R+ L P IS E V E + Sbjct: 61 SRIDFQTAAKSEIEVCIENLLWQWEADSRVSRNIITLLAPFISNNEFAAMVTKQTEIENL 120 Query: 119 HSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 H+ +Y+ I+R ++DP+ + ++ N+ + R+ I EL + + L Sbjct: 121 HALTYSEIVRQCISDPTEMIKRVMDNQAVLDRSSTIDDVMAELEILGAKKRL-------- 172 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + +++ L ++S+ ALE + F SFAC+FA A+R L G A++++ I D Sbjct: 173 ---GYELDDEHIRQTLIKFMVSILALEGLEFIASFACTFALAQRGLFMGVAQLVQKIMLD 229 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SM 297 E LH L++L DP + + CK + + + + E +WADY+F +G S+ Sbjct: 230 EILHSKMDFAALDILLK---DPVWFQSYQNCKGDVQRILDEVMENESNWADYIFSEGRSV 286 Query: 298 IGLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 +GLN +L ++V Y + LD + NP+P+++ W+ D+ Q A QE + S Sbjct: 287 VGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNIDSQQNANQEQDNSQ 346 Query: 357 YLVGQIDSEVD 367 YL+ + ++ + Sbjct: 347 YLLNTMVNDDE 357 >UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 B n=134 Tax=root RepID=RIR2B_HUMAN Length = 351 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 75/373 (20%), Positives = 142/373 (38%), Gaps = 48/373 (12%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 + + ++++ +EP+ + Q Y K+ ++ + FW EEVD+S+D Sbjct: 18 SSSDTNESEIKSNEEPLLRKSSRRFVIFPIQ-YPDIWKMYKQAQASFWTAEEVDLSKDLP 76 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 + L EK+ L + D I + + +PE + E +HS Sbjct: 77 HWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSE 136 Query: 122 SYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 Y+ +I + DP +F+ I T ++K+A+ + + Sbjct: 137 MYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIAD------------------ 178 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 K +++ A+E + F SFA F +R LM G LI+RD Sbjct: 179 -----------RKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRD 227 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E LH M L + + + ++ V A + E+++ G +I Sbjct: 228 EGLHCDFACLMFQYLVNKPSE-----------ERVREIIVDAVKIEQEFLTEALPVG-LI 275 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 G+N ++ QY+E++ + + +G FQ NP ++ +S + E VS Y Sbjct: 276 GMNCILMKQYIEFVADRLLVELGFSKVFQAE-NPFDFMEN--ISLEGKTNFFEKRVSEYQ 332 Query: 359 VGQIDSEVDTDDL 371 + +E + Sbjct: 333 RFAVMAETTDNVF 345 >UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Bacillales RepID=C6IYS7_9BACL Length = 343 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 153/376 (40%), Gaps = 38/376 (10%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M T T+ + G+ + ++ + KL + L W +E+ +++D Sbjct: 1 MQLQTIFNTEAPNKSTRIIGGECSGILNWNDIRMPHMYKLYKVLLLNHWIADEIPMAKDA 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E+ F N+ +LDS+Q + + LE E +H+ Sbjct: 61 QQFALLDPEEQRTFKINISLLAVLDSMQTMFVGD-VKRYFTDSSLEAISAIIGQQEVVHN 119 Query: 121 RSYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ +IV++ +F+ + + R + I++ Y + + Sbjct: 120 QSYSYVLSSIVSEQEQKEIFEYWKHDPVLLDRNKFIANIYQNFRDEPT------------ 167 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + + L++ LE I FY +FA + A + M G +++I I RD Sbjct: 168 ------------PQSFFEALVADLILEGIFFYSTFAFFYNLARDQKMMGTSQMISYIQRD 215 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H + L D PE+ +E Y +A + E +WA Y ++ + Sbjct: 216 ENQHCYFFAEVFKQLL--IDYPELN--TKENIDYAYRTIDRAVELETNWAHYTLKN--VP 269 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLV--SDNVQVAPQEVEVS 355 G++ + L Y++YI N R+ +GL+ + N +PWI + + + E + Sbjct: 270 GIDLNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSR 329 Query: 356 SYLVGQIDSEVDTDDL 371 +Y G++ + DDL Sbjct: 330 NY--GKVGDDNGFDDL 343 >UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Halobacteriaceae RepID=B0R7R4_HALS3 Length = 331 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 135/333 (40%), Gaps = 27/333 (8%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY--QALPEHEKHIFISNLKYQTLLDSIQG 89 YD + ++ ++ W PEEV + D + L + E+ + NL + + +S+ Sbjct: 18 IDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAESLTA 77 Query: 90 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 149 + +A+ ++ PE ++ A+ E +H+ ++ + ++ DP ++ I + Sbjct: 78 NNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGFDPEHMYGMYDRIPSIAE 137 Query: 150 RAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN-ALEAIR 208 + E + T V+ + T+ + + L+ +E I Sbjct: 138 KDEFVVGL-----------------TRAVDDQAFTIDTDDDLRDFLRDLVGFYVIMEGIF 180 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 FY FA A R M G + I RDE+LHL ++N +R D + Sbjct: 181 FYAGFAMMLALKRRGKMVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVW----TAD 236 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQT 328 + E L A E+ +A D ++G++ + YVEY+ + R Q + +D + T Sbjct: 237 FEAEVNSLMRDAVDLEQLYARDACPD-DLLGMSSEQFADYVEYVADRRFQQLRMDPVYGT 295 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 NP PW+ + + + E VS Y G Sbjct: 296 D-NPFPWMTEQVDLNT-ETNFFERNVSEYQQGG 326 >UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Bacteria RepID=B0U5P0_XYLFM Length = 349 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 80/368 (21%), Positives = 149/368 (40%), Gaps = 37/368 (10%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + +N + G+ + ++ Y F + ++ + FW P+EVD+ D+ Y L Sbjct: 15 EPRNPNRSTGIINGKTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDKRQYGELS 74 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 EK+ + + + LDS Q R + I+ P E IH+ SY++++ Sbjct: 75 AREKNAYDAIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHNESYSYVL 133 Query: 128 RNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 +I + + + VF+ T+ I KR I YD+ + Sbjct: 134 ASITDLANQNRVFEIARTHPTILKRNAPIMQAYDDFMR---------------------- 171 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + + L L+ + LE I FY FA + + M G KII I RDE H Sbjct: 172 --EKTAETLLYSLIQSSILEGINFYSGFAYFYNLVRQNRMTGTGKIISFINRDELAHTKF 229 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 ++ + ++PE+ + + F A + E W + + G++ + + Sbjct: 230 ISEVIRAIV--GENPELQ--TDALTDYVHQAFAHAIELETQWTGEVLNG--IDGIDVEEM 283 Query: 306 CQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVS-DNVQVAPQEVEVSSYLVGQID 363 +YV+Y N +G++ + +T N +PWI + + + E+ +SY +D Sbjct: 284 IRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKKTNVD 343 Query: 364 SEVDTDDL 371 + DDL Sbjct: 344 N--CFDDL 349 >UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K6_THERP Length = 328 Score = 273 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 149/349 (42%), Gaps = 27/349 (7%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKH 72 + + G P+ + +++ W PEEV + D D+ + L + E+ Sbjct: 1 MARRLLGGDPLAAVELFPLSHPWAYAHVQQAKHNTWFPEEVPLHDDVRDWHERLSDEERR 60 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 L + ++S+ + ++L ++ PE ++ A+ E H ++ ++I+ + Sbjct: 61 AVEMFLGFFNPMESLVTTNLLLSLYRAVTAPEARLYLARQAWEEANHVMAFEYVIKTLPL 120 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 D VF V + + + L T V E + Sbjct: 121 DRERVFGLHVEHPAVAAK------------------ELFQRQLAEQWLVTPDVESVEGLQ 162 Query: 193 KLYLCLMS-VNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 +L L+ LE I FY FA + AF +R L+ G I+ + +DE+LHL+ H++ Sbjct: 163 RLVRNLVGYFVILEGIFFYSGFALALAFRQRNLLRGLCTIVDWVLKDESLHLSFGIHLIT 222 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + + PE+ ++ ++ +L ++A + E+ + + + +IGL+ D+L +YV Y Sbjct: 223 TILE--EHPEI--MSAAFGRQLRELILRAVELEEAYNRAVLPE-PLIGLDADVLNRYVRY 277 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 I + R++ +GL + F NP+ W+ + + V E Y VG Sbjct: 278 IADRRLEELGLPIAF-GEPNPLRWMVAQVDMPEI-VNFFEARNIHYEVG 324 >UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Proteobacteria RepID=B0TZS9_FRAP2 Length = 410 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 138/336 (41%), Gaps = 37/336 (11%) Query: 34 YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--ALPEHEKHIFISNLKYQTLLDSIQGRS 91 Y L K W +E+D+S D D++ + + EK + L+ T D G++ Sbjct: 105 YPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDVAVGQN 164 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 +PL E+ + ++A E IH R+Y ++ + + P + + + + + Sbjct: 165 YYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYA-LLNDTLGLPDSEYHAFLEYKAMTDKI 223 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 + + + ++ L LCL E + + Sbjct: 224 DFMMD-----------------------------ANPNTRRGLGLCLAKTVFNEGVALFA 254 Query: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 SFA F M+G K++ RDE++H+ G + + ++P + + + K+ Sbjct: 255 SFAMLLNFQRFGKMKGMGKVVEWSIRDESMHVEGNAALFRIYCQ--ENPYIVD--NQFKK 310 Query: 272 ECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSN 331 E Y + +A + E + D + G++ GL D + +Y+ +IT+ R+ +GL+ + N Sbjct: 311 EIYLMASKAVELEDKFIDLAYEIGTIEGLKADEVKEYIRHITDRRLNQLGLNEIYNIDKN 370 Query: 332 PIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 P+ W+ W+++ E V+ Y V + D Sbjct: 371 PLTWLE-WILNGADHTNFFENRVTEYEVAGLTGNWD 405 >UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Verrucomicrobia RepID=C0ACD0_9BACT Length = 362 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 137/361 (37%), Gaps = 29/361 (8%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKH 72 + + G+ KY L + W PE++ + +D ++ A+ + E+ Sbjct: 26 KRVINGRETMTFNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERW 85 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 I + Y + + I G + L++ PEL+ + A E IH+ S ++I ++ Sbjct: 86 IIRMGIGYFSAAEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGI 145 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +P I ++ E + + + ++ E K+ Sbjct: 146 NPHECEAMFEDIPTIVRKNEFVVK------------------NSRQLRRDLDLTQPENKQ 187 Query: 193 KLYLCLMSV-NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 L + +E +FY F + + G ++ R RDE+ H+ +++L Sbjct: 188 LLARNMFLFGQCMEGTQFYGLFGMILSLYRQNKFPGIGQMFRYTLRDESNHIEVFRNLLM 247 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 L ++PE+ K+E + +A EK++ + +GL D Y++Y Sbjct: 248 DLVE--ENPEIW--TPGFKEELRETMREAVTLEKEFIRDCLP-VNAVGLAVDEFLTYIDY 302 Query: 312 ITNIRMQAVGLDLP-FQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 I + R++ VGL NP+PW+ + Q E V+ Y + D+ Sbjct: 303 IADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQ-NFFEGRVTEYQKASSLAVTHDDE 361 Query: 371 L 371 L Sbjct: 362 L 362 >UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative n=11 Tax=root RepID=Q5K9L8_CRYNE Length = 430 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 70/351 (19%), Positives = 128/351 (36%), Gaps = 50/351 (14%) Query: 17 PMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFI 75 + + KY+ + + + FW EE+D D ID+ + E E+ + Sbjct: 101 DILRESESRFVLFP-IKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQERFFIL 159 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 L + D I G + + I E + + E +HS +Y+ +I V D Sbjct: 160 RILAFFAASDGIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQ 219 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +F + I+++A+ Y + + + Sbjct: 220 EKDFLFRGMTNIPCIKQKADWALKYITDELPFRTR------------------------- 254 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L++ +E I F SFA F +R LM G LI+RDE +H + N Sbjct: 255 -----LVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLYNH 309 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 L+ E + + +A EK + ++IG+N ++CQY+E++ Sbjct: 310 LKHRCST-----------DEVHHIVSEALVIEKQFLTDALP-CALIGINAHLMCQYMEFV 357 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + +G + NP W+ L+S + E VS+Y + Sbjct: 358 ADRLVVDLGYPKIYNAT-NPFDWME--LISLQGKANFFESRVSAYQKANVS 405 >UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclassified Phycodnaviridae RepID=C7U0I3_9PHYC Length = 389 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 74/352 (21%), Positives = 137/352 (38%), Gaps = 49/352 (13%) Query: 19 FFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNL 78 +N KY +L +K W EEVD+S+D D++ L E+E+ L Sbjct: 76 ILASTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQKFIKYIL 135 Query: 79 KYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---S 135 + D I + N + I E ++ +E +H +Y+ +I + DP Sbjct: 136 AFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDPSEKK 195 Query: 136 VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLY 195 +F+ I T I+K+A+ ++D + Sbjct: 196 ELFEAIQTVPCIEKKAQWAMKWFDT-----------------------------KSRSFA 226 Query: 196 LCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRS 255 L + +E I F SF F +R LM G LI+RDE LH + LR+ Sbjct: 227 ERLFAFACVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHQEFAVELFKTLRN 286 Query: 256 GADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNI 315 + + +A EK + ++IG+N + + +Y+EY+++ Sbjct: 287 RPG-----------VDTIHAIVREAVDIEKGFILDALP-CNLIGMNSEKMSEYIEYVSDR 334 Query: 316 RMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 ++ +G+ + ++ NP ++ +S + + E V Y G++D + D Sbjct: 335 LLKQIGVPTIWNSK-NPFDFMEN--ISLDGKTNFFEKRVGDY--GKLDDDTD 381 >UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=Actinomycetales RepID=C7NLI2_KYTSD Length = 365 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 76/376 (20%), Positives = 156/376 (41%), Gaps = 33/376 (8%) Query: 1 MAYTTFSQTK-NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRD 59 M T ++ D +K+ P +Y F ++ + W EE+D+ D Sbjct: 15 MTSETHLESDLRDAVKQGSSLLDPGMSLTLRPMRYPQFYEMFRDAIKNTWTVEEIDLHSD 74 Query: 60 RID-YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 D + L E+H+ + + D+I + + L I+ PE ++ F E + Sbjct: 75 LADLHNKLSPAERHLVSRLVAFFATGDTIVANNLVLNLYEHINSPEARLYLSRQLFEEAV 134 Query: 119 HSRSYTHIIRNIVNDPSVVFDDI---VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGT 175 H + Y ++ V D + F+ I+ +AE ++ D + + Sbjct: 135 HVQFYLTLLDTYVPDEAERFEAFAAVENIPSIRTKAEFCFTWIDSIENLGQ--------- 185 Query: 176 HTVNGKTVTVSLRELKKKLYLCLMSV-NALEAIRFYVSFACSFAFAERELMEGNAKIIRL 234 + +E +++ L L+ +E + FY +FA + R L+ G A Sbjct: 186 ---------LETKEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRGLLNGLASGTNW 236 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 + RDE++H+ ++ +RS ++P++ + E + + ++A E +A+ L Sbjct: 237 VFRDESMHMAFAFEVVETVRS--EEPDLFD--AEMAGQVRQMLMEAVDAEAQFAEDLLGM 292 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEV 354 G + GL+ + Y+E + + R +G+ + T+ NP+ ++ V + E V Sbjct: 293 G-VAGLSVADMRAYLENVADRRAVQLGMPEIYGTK-NPLAFMELQDVQEL--SNFFERRV 348 Query: 355 SSYLVGQIDSEVDTDD 370 S+Y VG ++ V D+ Sbjct: 349 SAYQVG-VEGSVSFDE 363 >UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subunit n=9 Tax=Bacteria RepID=B0RGP8_CLAMS Length = 331 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 70/331 (21%), Positives = 140/331 (42%), Gaps = 25/331 (7%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRS 91 Y L ++ ++ W P E+ + D D++ + + E+H + Y + + ++ Sbjct: 18 VNYQWAMDLYDQAVANTWFPNEIQLGEDIADFKKMTDEERHAITFLMSYFNPNELLVNKA 77 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 + P I+ PE ++ + E H S+ +++ D ++ V + ++ Sbjct: 78 LAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETFPIDREAAYNSHVDIPSMARKE 137 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN-ALEAIRFY 210 E + + E +T+ ++ E KK L++ N LE I FY Sbjct: 138 EFEVKFIKRMTE-----------------QTLDITTTEGKKDFVRNLVAYNVILEGIWFY 180 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 F S +F +R L+ ++ I RDE+LHL +++ + D + EE Sbjct: 181 SGFMVSLSFRQRNLLRNFGSLMDWIVRDESLHLKFGINLILTVLEENPDLQ----TEEFA 236 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS 330 E + + A + E+ + L +G ++GLN + + QYV+Y+ + R++ +G + ++ S Sbjct: 237 AEIKQMILDAVEMEEQYNRDLLPNG-ILGLNANYINQYVKYLADRRLEELGFEAEYKV-S 294 Query: 331 NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 NP W+ T V E +SY Sbjct: 295 NPAKWMAT-ANDTLQLVNFFESTNTSYESNA 324 >UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E3 Length = 309 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 72/332 (21%), Positives = 138/332 (41%), Gaps = 34/332 (10%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRS 91 K+ + ++++ + W P V+++ D Y L ++ +F L + + LD IQ + Sbjct: 6 MKHTWAKGILDRMENNTWFPHVVNMADDVASYNRLNAADRFMFDKALAFLSNLDGIQFNN 65 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 N + ++ PE+ + A+ E +H +SY II + DP V+ + + ++ Sbjct: 66 INQNIAKHVTSPEVSMCLSRQAWEEALHVKSYATIIETVSLDPMSVYMTFERDGLLAQKN 125 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 + I L E S + L +S LE + F+ Sbjct: 126 QFILKQSRLLGEKFS------------------------AEGFALSCVSNVLLEGVYFFS 161 Query: 212 SFACSFAFAERELMEGNAKIIRLIARD-EALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 F + A++ M G+A +IR I RD E HL HML+ LR D + Sbjct: 162 GFLSFYLLADKGEMLGSADMIRYIQRDEEGTHLDLFAHMLDTLRHENKDV----FTQSFW 217 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL-PFQTR 329 + ++F+ +++ E W Y+ + + N + Y++++ N+R + + P+ Sbjct: 218 NKALEVFLTSSEMEISWGKYITKGVT----NPKAIEDYIKHLANLRAEQIQAPFVPYPGV 273 Query: 330 SNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 NP PW+ + + + E V+ Y VG Sbjct: 274 KNPFPWVEQFSKPNTSEKNFFETRVTDYKVGG 305 >UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=A4XD08_SALTO Length = 350 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 146/343 (42%), Gaps = 31/343 (9%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRS 91 +Y F ++ + W EEVD+ D D L E+H+ + + D+I + Sbjct: 33 MRYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAKLSSAERHLVSRLVAFFATGDTIVANN 92 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQIQ 148 + L ++ PE ++ F E +H + Y +++ V + F + I Sbjct: 93 LVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEKERFAAFAAVENIPSIA 152 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN-ALEAI 207 ++AE + D + E+ + ++ L L+ +E + Sbjct: 153 RKAEFCFRWIDSIFELRELR------------------TQADRRAFLLNLICFAACIEGL 194 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 FY +FA + R L+ G A + RDE++H+ +++ +R+ ++P++ + Sbjct: 195 FFYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTVRA--EEPDLFD--A 250 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 + +++ ++ +A E +A+ L G + GL+ + +Y++++ + R+ +G+ + Sbjct: 251 DLERQVKEMVAEAVDCEVQFAEDLLEQG-VSGLSLADMREYLQHVADRRLVTLGIAPMY- 308 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 +NP ++ V + E VS+Y +G + V DD Sbjct: 309 GSANPFAFMELQDVQEL--SNFFERRVSAYQMG-VSGSVTFDD 348 >UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD Length = 352 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 76/365 (20%), Positives = 154/365 (42%), Gaps = 36/365 (9%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 + + + G+ + ++ + +I+ + + + FWRP E+ + D + + Sbjct: 17 LLEPSHPNRGTKIVGGECSGLLNWNDED-EIWYDISQTLEANFWRPVEIKMKEDEKMWDS 75 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L E+ F+ LDS+Q ++ + ++ + L A E H+ SY++ Sbjct: 76 LTPIEQDTFLRVGTALACLDSLQVKAI-LEVIRFTTNSALANISAFIAQQEATHTTSYSY 134 Query: 126 IIRNIVNDP--SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 I ++V P + F++ + + + KR + + Y++ E S Sbjct: 135 ITSSLVRLPVQNQYFNETMKHPVLAKRNKLVLDVYEDFAENPSL---------------- 178 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 + L+ L+ LE I FY FA + A ++ M ++ +I I RDE H Sbjct: 179 --------QNLFRMLVQSINLEGIYFYSGFAFFYWLASQQKMMKSSTMISYIQRDEMQHA 230 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 ++ L + ++PE+ +E Q D +A EK+WA + D + GL+ + Sbjct: 231 YFIGLLIRRLLT--ENPELN--TQENAQYIVDSLKEAVATEKEWAGEILAD--IEGLDLE 284 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLV--SDNVQVAPQEVEVSSYLVGQ 361 Y+EY+ N R++ +G+D ++ R NP+PWI + ++ + E + Y Sbjct: 285 EFDHYIEYLANKRVRQLGMDNIYEERGNPMPWIQVFSDEMMEHTKTDQFENKSRDYSGAT 344 Query: 362 IDSEV 366 + Sbjct: 345 KKNNF 349 >UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain n=68 Tax=Alphaproteobacteria RepID=B3CU68_ORITI Length = 359 Score = 258 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 116/335 (34%), Gaps = 35/335 (10%) Query: 34 YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSP 92 Y K Q W PEEV ++ D D++ L EKH+ ++ T D Sbjct: 30 YPWAYKAWHTQQKIHWLPEEVPLADDIKDWKYNLTPGEKHLLTQIFRFFTQADIEVNNCY 89 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 + E++ + ++ ETIH +Y+H++ I P + + + ++ + + Sbjct: 90 MKHYARVFQPTEVQMMLSAFSNMETIHIAAYSHLLDTI-GMPETEYQAFMKYKAMKDKYD 148 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 + + ++ ++ + E ++ + S Sbjct: 149 YMQRF----------------------------NVDNKEEIATTLAVFGAFTEGVQLFAS 180 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 FA F M+G +II RDE LH + + E+ K Sbjct: 181 FAILLNFPRYNKMKGMGQIITWSVRDETLHTNSIITLFKTFIQEYPEVW----TEQLKSR 236 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNP 332 Y+ E + D F G + GL + +Y+ YI + R+ +GL + NP Sbjct: 237 IYEACCTIIHFEDAFIDLAFEVGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNP 296 Query: 333 IPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 + W++ L + E V+ Y D Sbjct: 297 LTWLDQIL-NGVEHTNFFENRVTEYTRSATTGSWD 330 >UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Propionibacterineae RepID=D1YE85_PROAC Length = 328 Score = 258 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 138/331 (41%), Gaps = 25/331 (7%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRS 91 Y L + ++ W P E+ + D D+ + E H + Y + + ++ Sbjct: 16 VTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNELLVNKA 75 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 + P ++ E ++ + E H ++ +++ D + + + ++ Sbjct: 76 LAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVPSMARKE 135 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN-ALEAIRFY 210 ++ + E +T+ ++ E K+ L++ N LE I FY Sbjct: 136 AFEVAFIKRMTE-----------------QTLDITTVEGKQDFVRNLIAYNIILEGIWFY 178 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 F + +F +R L+ +I + RDE+LHL +++ + ++PE+A +E Sbjct: 179 SGFMVALSFRQRNLLRNFGSLIDWVVRDESLHLKFGMNLILTVLE--ENPEIA--TDEFA 234 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS 330 E +D+ VQ + E+ + + G ++G+N D + YV+Y+ + R++ +G + ++ Sbjct: 235 AEIHDMIVQGVEMEEQYNRDMLPRG-ILGMNADYVNDYVKYLADRRLEELGFEPEYRVV- 292 Query: 331 NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 NP W+ T V E +SY V Sbjct: 293 NPAKWMAT-ANDTLQVVNFFEATNTSYEVNA 322 >UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=B4D9U7_9BACT Length = 390 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 138/359 (38%), Gaps = 27/359 (7%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHI 73 + + G KY ++ ++ + W P+ +D++RD + L E+ I Sbjct: 55 KRVINGLRSAELNVLPLKYHEAYRIYKQMKANHWEPDVIDMTRDSQQWNTGALSPKERWI 114 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 + Y + + I G S + ++ EL+ E+IH S HII ++ D Sbjct: 115 IEMGVGYFSAAEGIVGDSVLHVIEDNLTAAELKHASLRHIAEESIHMDSLLHIIGSLNID 174 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 V +Q++ I+ + EL + ++ K+K Sbjct: 175 LDEVTAKFSDIPSVQRKNAFITRHMPEL------------------KMGIDLTQTANKQK 216 Query: 194 LYLCLMSVN-ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + + +E +FY FA + + M G ++ + RDE+ H+ +++L Sbjct: 217 FAKAIFGITQVMEGTQFYALFAMILSLHRQNKMTGIGQMFQYTLRDESNHIELGRYILTQ 276 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 L + ++P++ E + E + + + EK++ + + G+ + YVEY Sbjct: 277 LIA--ENPDIW--TPEFRAELVEFMREGVELEKEFVRDCLPEDGV-GMTQADFLTYVEYN 331 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + R+ + L ++NP W++ ++ + E V+ Y DDL Sbjct: 332 ADRRLAGLDLPALSGVKTNPFAWLDE-VIFLRKEKNFFETRVTEYQTSGSLKNTAEDDL 389 >UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain n=1 Tax=Escherichia phage rv5 RepID=B3RGP5_9CAUD Length = 362 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 94/365 (25%), Positives = 173/365 (47%), Gaps = 17/365 (4%) Query: 5 TFSQTKNDQ--LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 F+ P+F GQ + + +KY +L +KQ W +EVD+S+ D Sbjct: 3 VFNAENTAHKTGDYPLFLGQQMGMYDSINKKYPQLFELYKKQKEQDWAEDEVDLSQSISD 62 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 + + + + L +Q DS+ RS P I+ EL T + + E +H+ + Sbjct: 63 FVTCSKSTYDVMVQTLMWQWEADSVAARSIICLFSPFITNSELFTLLMKQSEIEVLHALT 122 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 Y+ I+R + + + ++I N+ + R+ I Y EL + + + L Sbjct: 123 YSEIVRQCLPNAREIIEEIQENQNVLSRSGVIVKYMQELEVIGAKYRL----------DP 172 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 +V ++K + L ++ ALE+I F SFAC+FA AE+ + A++++ I DE LH Sbjct: 173 SSVKEDIVRKCILRALFALLALESIEFIASFACTFAVAEQGIFVQVAQLVQKIMLDEMLH 232 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLN 301 G ++++L + DP + E K E ++ + +E W+DY+F +G ++IGLN Sbjct: 233 SKGDFAIIDILLN---DPAWEKSFLEIKGELKEILDEVRTKEYGWSDYIFSEGRAIIGLN 289 Query: 302 KDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 +L ++V+Y + G+D F +P+P++ W+ Q A QE+ + Y V Sbjct: 290 SPLLKEWVDYNCSPIYDYYGIDKDFVPPTKDPLPFMQVWMKPSLQQTANQEMSNTDYRVN 349 Query: 361 QIDSE 365 ++ Sbjct: 350 TTVND 354 >UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C3B1_9GAMM Length = 374 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 72/347 (20%), Positives = 140/347 (40%), Gaps = 22/347 (6%) Query: 17 PMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIF 74 + G+ +V + KY + FW P E+ + D++ + L E E +F Sbjct: 43 KIIGGRGYDVRQPIPVKYTSVRERFLNARKNFWIPNEIPMGEDKLQWNTGLLTEAEMWLF 102 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 SN+ Y T D++ + + A+L I+ E+ + E+ H SY I+ + D Sbjct: 103 KSNISYLTASDNLVPDNLDNAILKHITANEMRQYFRHQIMEESNHIESYLFILESFGLDE 162 Query: 135 SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 K I + Y E+ +T + T+ V E + L Sbjct: 163 --------------KGQGQIFNLYQEVPALTEKLNWNLTFTNNVVNSEAPRGTLEANRAL 208 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 L+S E + F + F+ FA A + + A+ I RDE LH + ++ + Sbjct: 209 LEDLISYYIFEYLFFPLGFSQIFALARKGKLRNTAQQYSYIWRDENLHSSNGLWLIKQII 268 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 ++ E+ + ++ + +A + E D+A +G ++GL ++ ++ + Sbjct: 269 Q--ENHELWDST--MQERSRAIVSEAVKLETDYAHASMPEGGIVGLPVKTYIKFSHFVAD 324 Query: 315 IRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 + +G+ F+ R +P+PWI+ + ++ V E V Y G Sbjct: 325 NICKNLGIKPLFRVREHPMPWISEYELNHEV--NFFEGRVREYQTGS 369 >UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chain n=4 Tax=unclassified Myoviridae RepID=C5H7Q1_9CAUD Length = 357 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 86/361 (23%), Positives = 166/361 (45%), Gaps = 15/361 (4%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 + P+F G + Y +L ++Q + W +E + R+D++++P + Sbjct: 4 QHPIFLGGERKTFDSLNKHYPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSGVM 63 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 + LK+Q D+ +S A P IS T + + E +H+ +Y+ I+R + +P Sbjct: 64 LEILKWQWEADTQVAKSLAFAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIKNP 123 Query: 135 SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 + D+I N +Q R + ++ +EL++ + L V + K + Sbjct: 124 ETILDEINQNVAVQDRLKTVNRVLEELLDEGINYRL-----SYVRDSLLDKDPLHFHKVI 178 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 L +V ALE I F SFAC+FA ++ +G A+ ++ I DE LH T+ + +L+ Sbjct: 179 LKGLFAVTALEGISFMASFACTFALDAQDKFQGIAQAVQKIMLDEILH---TKIDIEVLK 235 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLNKDILCQYVEYIT 313 D E + ++ E + + + E+ W+ Y+F +G +++GLN +L ++V Y Sbjct: 236 ETLRDDEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAVVGLNTKLLHEWVYYNA 295 Query: 314 NIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 G+ F + P+ ++ + D Q A QE + +YL+ + DDL+ Sbjct: 296 APLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGAYLLNTV-----VDDLN 350 Query: 373 N 373 + Sbjct: 351 S 351 >UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subunit n=4 Tax=Myoviridae RepID=A2PYM8_9CAUD Length = 348 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 93/373 (24%), Positives = 156/373 (41%), Gaps = 44/373 (11%) Query: 5 TFSQTKNDQ-LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ + +D K +F G P N+ KY L + + W P+ D++ D +Y Sbjct: 8 IFNPSGDDSPQKRRLFGGNPTNIINLKDVKYKWASHLFTEMRANIWIPQATDLTPDINNY 67 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 +P + + F L Y T LDS+Q R + L+P+I+ PE+ + E +HS+SY Sbjct: 68 VTMPPNMRRAFDGMLSYLTFLDSLQTRVLPL-LMPVITAPEVSICMGEQLSQEQVHSQSY 126 Query: 124 THIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 +II ++ +++ + + KR E I + YD I + Sbjct: 127 AYIIETVIPTDKRDYIYELWREDPVLLKRCEYIQNLYDRYIHEMT--------------- 171 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + + ++S LE I F+ F +A A M A II+LI RDE Sbjct: 172 ---------MENYTISMVSDFLLEGIYFFPGFRLFYAIANERYMSATADIIKLIERDEQT 222 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL + N++R+G + + +E DLF +AA+ E +W L + G+N Sbjct: 223 HLKL---ISNIIRTGLAEGTLMWDTDE----IIDLFRKAAEYEIEWG--LHIGLGVNGIN 273 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRS---NPIPWINTWL----VSDNVQVAPQEVEV 354 + QY +Y+ NIR +A+GL F+ R NP + + + E V Sbjct: 274 ATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGEDSITRDNFFESGV 333 Query: 355 SSYLVGQIDSEVD 367 ++ D Sbjct: 334 IYRNPAKVVDGWD 346 >UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain 1 n=151 Tax=root RepID=RIR2_YEAST Length = 399 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 137/352 (38%), Gaps = 49/352 (13%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHI 73 +EP+ + + ++I++ ++ + FW EE+D+S+D D+ + E+E+ Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQ-AYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFF 133 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 L + D I + + IPE +++ E IHS +Y+ +I + D Sbjct: 134 ISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKD 193 Query: 134 PSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 P +F+ I T +I ++AE + + Sbjct: 194 PKESEFLFNAIHTIPEIGEKAEWALRWIQD-----------------------------A 224 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 L++ ++E + F SFA F +R +M G LI RDE LH + Sbjct: 225 DALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLF 284 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 L++ D + +A + E+ + +++G+N D++ QYVE Sbjct: 285 AHLKNKPDP-----------AIVEKIVTEAVEIEQRYFLDALP-VALLGMNADLMNQYVE 332 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 ++ + + A G ++ NP ++ +S + E VS Y + Sbjct: 333 FVADRLLVAFGNKKYYKVE-NPFDFMEN--ISLAGKTNFFEKRVSDYQKAGV 381 >UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=Proteobacteria RepID=Q2S729_HAHCH Length = 405 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 135/339 (39%), Gaps = 26/339 (7%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQT 82 ++ + KY + W P ++++S+D DY L EKH++ + L Y T Sbjct: 88 TDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKHVYENVLAYLT 147 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV 142 D + R+ +A++ +S PEL+ + + E++H+ +Y H I I D S +++ Sbjct: 148 TSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIETIGLDQSEIYNRYR 207 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 I ++ + + L+ + +L+ + + Sbjct: 208 VTPAIYRKIKMGNERISALLRPDINLR----------------NRDDLETFVMAYIFFAG 251 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 E FY F+ FA R LM+G + ++ I RDE +H ++ + Sbjct: 252 IFEGCWFYNGFSPIFALQRRGLMKGTGEQLQYIMRDEVMHCAFGIRVVKQIIKE------ 305 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 E + L+ +A E +A +L ++ ++G + + +I N R + + L Sbjct: 306 -EGVTLDPKAIKTLWEEAEAAETGYAHFLLKE-PILGYTAEDHIEQFRFIANRRAKQLKL 363 Query: 323 DLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 D PF N +PW++ + E V+ Y G Sbjct: 364 DEPFPGAGNALPWLDEQASMRKEK-NFFETRVTEYQTGA 401 >UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=cellular organisms RepID=Q2RUE9_RHORT Length = 358 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 130/355 (36%), Gaps = 48/355 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDS 86 Y+ ++Y + +KQ W EEV + D D+ + + + E+++ ++ T D Sbjct: 26 YNVERYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWASDRVSDQERNLLTQIFRFFTQSDV 85 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 + +P+ E++ + + ETIH +Y ++ + P F Sbjct: 86 EVSDNYLKRYMPIFQPLEIQMMMAAFTNMETIHIDAYALLLTTL-GMPRTEFSAFRDYAA 144 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 ++ +A+ + H G GT +T+ M E Sbjct: 145 MRDKADYM--------------HTFGVGTMADVSRTLA--------------MFGAFTEG 176 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + SFA F M+G +I+ RDE+LH G + + + E + Sbjct: 177 MALFASFAMLLNFPRHNKMKGMGQIVTWSVRDESLHCQGIIRLFHEW-----NRETGALT 231 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + + D+ E+ + D F G++ G+ + + YV Y+ + R+ + L + + Sbjct: 232 KPVRDDILDVATTMVGLEEKFVDLAFELGAIEGMRAEDIKSYVRYVADWRLTQLKLPILY 291 Query: 327 -----------QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 Q R +P+PW+ L + E + Y D D Sbjct: 292 GHFRETEAGYEQLRPHPLPWLVEIL-NGVEHANFFEQRSTEYSKAATQGAWDGPD 345 >UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subunit n=4 Tax=Aquificales RepID=C0QUH3_PERMH Length = 329 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 75/348 (21%), Positives = 153/348 (43%), Gaps = 24/348 (6%) Query: 14 LKEPMFFGQPV---NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 +K+ F G+ N+ + +Y +F+++ KQ W PEE+++ +D +DY++L E Sbjct: 1 MKKLQFIGKTSVKDNIRLTENPRYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKSLTPTE 60 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 K +F +++ Y + + P+++ P + T F E IHS + I+ Sbjct: 61 KDLFDTSVGYFASSELLVQNVLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTF 120 Query: 131 VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 D +++ + ++ + ++ E I D + GK +L Sbjct: 121 EMDRKRIYNITLEDKLLMEKQELIIRAVDRI----------------TYGKADPDTLEGK 164 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 K+ L L++ E + FY +FA FA + M+ + LI DE+LHL + Sbjct: 165 KQILTAILLNNIIQEGMFFYSAFAHFFAMKDTGKMKNVVSGVELILIDESLHLQNGIEAI 224 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + ++PE+ + E+ + + + A + E ++ F ++ G++ L +Y++ Sbjct: 225 LTIVE--ENPEIVDD-EKFVENIKETIIDAVELELNYLKTKFGGTTIFGVSYKELEKYMK 281 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 YI + R++ +G D F+ NP+ ++ V EV + Y Sbjct: 282 YIADRRLEELGFDPQFKIDQNPLKFLQKEDVKKL--TNFFEVSSTEYT 327 >UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NX45_COPC7 Length = 386 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 119/352 (33%), Gaps = 70/352 (19%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + Y Q Y ++ + FW EE+D+S D +D+ L E+H Sbjct: 32 EEPLLKPSPKRLTLYPIQ-YPEIWTHYKRAQASFWTAEEIDLSHDMMDWSKLTNAERHFL 90 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + +PE + E +HS +Y+ +I + DP Sbjct: 91 SRILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDP 150 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 +F I T IQ++AE ++ + Sbjct: 151 EERDFLFRAIETIPSIQRKAEWALTW-----------------------------TSDKS 181 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 L++ +E + F SFA F +R L+ G LI+RDE +H + Sbjct: 182 TTFAERLVAFAVVEGVFFSGSFAAIFWMRKRGLLPGLTFSNELISRDEGMHTDFACLLFA 241 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 LR + +A + EK++ + Sbjct: 242 YLRKRP-----------HSDTILAIVTEAVEIEKEF-----------------------F 267 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + ++G D + NP ++ L+S + E VS Y + Sbjct: 268 SADRLLTSLGNDKHYHVD-NPFDFME--LISMEGKANFFEKRVSDYAKANVS 316 >UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 Length = 419 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 70/348 (20%), Positives = 137/348 (39%), Gaps = 54/348 (15%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 +F G+ + +Y +L +KQ + FW EE+D+S D D++ EKH Sbjct: 108 LFNGKT-------EHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLV 160 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV- 136 L + LD I + + I IP++ +E +H SY+ +I+ D Sbjct: 161 LAFFASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQ 220 Query: 137 --VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 V I T I+K+A + + L Sbjct: 221 RHVMRSIQTMPIIEKKALWAEKWMN-----------------------------PETASL 251 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 L+ LE ++F SF + +R+ +G + LIARDE LH T + + L+ Sbjct: 252 AERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIARDEGLHATASVLIYKHLK 311 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 + ++ +++F A E ++ ++IG+++ + +Y++++ + Sbjct: 312 NRLP-----------RERVHEIFKHAVSVECEFISSALP-VALIGISEKSMTEYIKFVAD 359 Query: 315 IRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + +G D + +NP W++ ++S + E V+ Y + Sbjct: 360 YWLNQLGYDKVYNC-ANPFEWMD--MISLQGKTNFFENRVAEYSKPGV 404 >UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subunit n=7 Tax=Ranavirus RepID=Q8QYZ8_RTRV Length = 387 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 128/345 (37%), Gaps = 40/345 (11%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDSIQGR 90 +Y E + K W E+++ D D+++ + EK L+ T LD G Sbjct: 77 RYTWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEKAFVSCVLRLFTQLDVEVGA 136 Query: 91 SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKR 150 L + E+ + ++A E IH ++Y+ ++ + + P + ++ + Sbjct: 137 LYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYS-LLNDTLGMPDCEYQAFADYVEMTDK 195 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + + +L L + L +++ E + + Sbjct: 196 LDFMREM-------------------------DCSTLPGLARSLLRAVLN----EGVSLF 226 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 +F F M+G K++ RDE +H+ G + L S +I E K Sbjct: 227 AAFVMLLTFQRSGKMKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDIIELFK 286 Query: 271 QECYDLFVQAAQQEKDWADYLFRD-GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ-- 327 ++ + A+ E+ + D F++ G + L + YV Y+ N+R +GL + Sbjct: 287 EDA----ERVAELEEAFVDLAFQECGPVCELEPKQVKDYVLYVINLRAANMGLPKLIERA 342 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + PIPW+ WL+ E V+ Y G + + L Sbjct: 343 PEACPIPWV-KWLIDGADLTNFFENHVTEYETGGLTGSWSYEPLD 386 >UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=Shrimp white spot syndrome virus RepID=Q9INE3_WSSV Length = 413 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 142/361 (39%), Gaps = 48/361 (13%) Query: 10 KNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEH 69 + D K + P ++ ++ +K+++ FW EE+D RD D++ L + Sbjct: 51 QVDTFKHLLTRENPNRFVSRPIV-HEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQD 109 Query: 70 EKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRN 129 EK + L + D I + L + IPE ++ + E+IH Y +I Sbjct: 110 EKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDR 169 Query: 130 IVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVS 186 +V D ++F+ I+K+ + ++ Sbjct: 170 LVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQS-------------------------- 203 Query: 187 LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGT 246 L +++ A+E I F +FA F R ++ G I+RDE LH Sbjct: 204 ----NNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGLTSSNEFISRDEGLHRDFA 259 Query: 247 QHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILC 306 +L + D P ++ ++ +A + E+++ ++G+N ++ Sbjct: 260 CMLLK--KGFVDTP--------SRERILEIVTEAVRIEQEFLTVSLP-VKLVGMNCKLMS 308 Query: 307 QYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 QY+E++ + + +GL+ + NP P+++ + + + E V+ Y Q+ + + Sbjct: 309 QYIEFVADKLLVEMGLEKHYNVT-NPFPFMDNISLEN--KTNFFEKRVAEYQRAQVMASI 365 Query: 367 D 367 + Sbjct: 366 N 366 >UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Brachyspira RepID=C0QY28_BRAHW Length = 356 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 84/357 (23%), Positives = 153/357 (42%), Gaps = 17/357 (4%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 E +FFG + R D +++ KL E W +EVD D+ + +LPE + F Sbjct: 12 NEKIFFGDFGHYLRIDSVSHEVARKLKEASEGNTWFSKEVDYKSDKTRFSSLPEDAQRAF 71 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 N+ YQTL+DS + L +++ A E IH+ SY++ + + Sbjct: 72 KLNIAYQTLMDSGVTSGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHE 131 Query: 135 SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 + D+V N++ K M L G N + +L E K+ + Sbjct: 132 ATDTLDLVYNDEFVKH------------RMEKEVELFGNVDELCNLENSPATLDEKKQAV 179 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAER--ELMEGNAKIIRLIARDE-ALHLTGTQHMLN 251 L+ + LE+++F SF +F + G K I+LIA DE H+ ++++N Sbjct: 180 LKLLIGIYLLESVKFPFSFLVTFTINNNYDNAIAGFTKTIKLIAHDELNTHVPTGKNVMN 239 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQ-AAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 +LR + E + +E WA YLF + G+N + +++ Sbjct: 240 ILRKENEQGFTHLFKSGWFNETARAMAEFTVNEEIKWAKYLFDGYQVAGINSSVSEHFIK 299 Query: 311 YITNIRMQAVGLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 Y +R++ +G++ P+ + + I W N++ + A QE +SY G + +++ Sbjct: 300 YWAGVRLRDLGVESPYNEKKSDVIDWFNSYRDINKQNAALQETTNTSYQKGALKNDL 356 >UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase small subunit 048L n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR2_IIV3 Length = 376 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 122/335 (36%), Gaps = 18/335 (5%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRS 91 +Y + W +E+++ D D+ L E EK + L++ T D Sbjct: 57 EYPGCYDKWDTHEHAHWSFKELNMQDDVHDWHNRLSEAEKTFLVQILRFFTQGDVDVA-V 115 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 V L L PE+ + ++ E +H SY+H+I + N P V + + + + ++ + Sbjct: 116 GYVQYLQLFQQPEVRMMLFSFGAREAMHIASYSHLISTL-NLPDVTYQEFLKYKAMKDKH 174 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 E + + + L++ + +E ++ + Sbjct: 175 EFVFN-----------SRFKSTTVGRFFNYLLFGYDTHLEEIAVKIALFSAFIEGVQLFS 223 Query: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 SF F LM+ +II+ DE H + + L + + + Sbjct: 224 SFIMLLNFTRHGLMKKMGQIIQWSIADETHHTNSMMELFSTL---VVENKSHIRLGVLEA 280 Query: 272 ECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSN 331 D + Q E + D F G M L D + Y+ YITN R+Q +G + N Sbjct: 281 RVRDTARKIVQLEDGFIDLAFSMGEMRQLTADDVKSYIRYITNRRLQTMGYLPLYSVVEN 340 Query: 332 PIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 P+PW+ L++ E + + Y + + Sbjct: 341 PLPWVED-LLNAPSHTNFFENKPTEYAKASLTGDW 374 >UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Bacteria RepID=C6D5U5_PAESJ Length = 318 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 76/337 (22%), Positives = 143/337 (42%), Gaps = 40/337 (11%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 + +++ D ++ + FW EE+ +S D++D+ + + E+ ++ + L TL Sbjct: 1 MKAVNWNRPDDDFTLTFWQQNVMQFWTDEEIPLSDDKMDWMEMSDTERTVYKNVLGGLTL 60 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDI 141 LD+IQG +L + + + + + E IH++SY+ I + + + +F + Sbjct: 61 LDTIQGGVGMPKILEHVDGLQRKAVLAFMSMMEQIHAKSYSSIFTTLASTEEIDAIFQWV 120 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 TNEQ+QK+A +SS+Y + E K++LY + + Sbjct: 121 ETNEQLQKKATLVSSWYQGI---------------------------ETKQQLYKAMAAS 153 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F A + M + +II LI RDE++H + L + E Sbjct: 154 VFLESYLFYSGFFYPLYLAGQGKMTSSGEIIDLILRDESIHGLYVGVLAQELFNQFTPEE 213 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 + K+E + L + E + D L+ IGL ++ + YV Y N + +G Sbjct: 214 ----QAQLKEEVFALLNTLYENEVVYTDNLYSP---IGL-QEDVKAYVRYNANKALMNLG 265 Query: 322 LDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSY 357 + F NPI + + + Q + + Y Sbjct: 266 FEPYFPEEPVNPI--VFNGISTHTKQHDFFSKKGNGY 300 >UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=UPI0001976997 Length = 347 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 82/372 (22%), Positives = 164/372 (44%), Gaps = 39/372 (10%) Query: 5 TFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F++ ++ + F + +D ++ +LI++ FW P+EV +S+D++ + Sbjct: 10 VFNENLPNKGER--MFDDVSGILFWDDIINQVYYELIKEMREVFWIPDEVSMSKDKVQWA 67 Query: 65 A-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + E E+ +F++ + +LDSI NVA I ++ + A ETIH+ SY Sbjct: 68 TEMNEMEQELFLNAIGILAVLDSIATYFDNVAAY-YIRDSAIKALMAFVAAMETIHNESY 126 Query: 124 THIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 T+I+ ++ + VF+ NE + +R + + +DE I+ + Sbjct: 127 TYILSSVSSKAVSLDVFERPKKNEFMIRRNKLMMDLFDEFIQNPT--------------- 171 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + L++++ LE + F F + F M G +I+ I RDE Sbjct: 172 ---------PETFAKGLVAMSGLEGLCFVNGFTPFYHFNRNGKMFGTGTVIQYIQRDEMK 222 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H ++ + + + EE + YD F + Q E+++ + L+++ I + Sbjct: 223 HSYFQTILVRDILTQYPE----LNTEEFSEFVYDFFTELVQLEREFCEDLYKNTPDIDI- 277 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTW--LVSDNVQVAPQEVEVSSYLV 359 + + +Y+ Y N+ + +GLD F + NP+PWI + +N + E + +Y Sbjct: 278 -EEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336 Query: 360 GQIDSEVDTDDL 371 + + D DDL Sbjct: 337 AN-EQKNDWDDL 347 >UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6V3_SULNB Length = 337 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 142/361 (39%), Gaps = 37/361 (10%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 ++ + L E ++ G P +++ KY + + + W P EV+ S ++ +++A Sbjct: 7 YNPQGEEILDEKIYGGSPTGFVDFNRSKYRWDSNIYDLMNANTWFPSEVNTSTEKKNFEA 66 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L ++E+ I+ + DS Q L + +++ + E HS+SY Sbjct: 67 LTDNEQSIYKMTFAQLSFNDSAQ-EEYLSDFRRLANNRLVKSVISLQIMQEVNHSKSYAV 125 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 ++ + VF+ + + K+ ++ + + I+ S Sbjct: 126 LLD-ACGNSEEVFNLYKYDAALNKKNLQVAEQFAKYIDGGS------------------- 165 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE-ALHLT 244 K+ L M+ LE I F + F+ + + + G +I+ IARDE HL Sbjct: 166 -----ADKMLLSAMASVNLEGIYFLLGFSYIYLLG--DKVPGARDMIKFIARDELNTHLP 218 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 ++ ++ + IA Y + A + E ++ YL ++G+ ++ Sbjct: 219 LFANIFKTIQKENN------IATSTIDAAYKMIQDAVKIELEYGHYLLDQFPIMGVTHEL 272 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPI--PWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + Q V N R++ +GLD F + + L + V+ E VS+Y I Sbjct: 273 MEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKSNFFESNVSNYAKSSI 332 Query: 363 D 363 D Sbjct: 333 D 333 >UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ8_9CAUD Length = 346 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 69/354 (19%), Positives = 128/354 (36%), Gaps = 47/354 (13%) Query: 34 YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP-EHEKHIFISNLKYQTLLDSIQGRSP 92 Y F L+ K W +E ++ D D++ + E+ L T D + + Sbjct: 22 YQEFYDLMTKHEDAHWVKQEAELGDDVNDWRNRSSDDERSFIKEILTVFTQGDVVVADNY 81 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 +P E+ W+ A E IH +Y + P +F +++++R + Sbjct: 82 KSIFIPAFKNNEVSNWLVGVAAREVIHQDAYA-MANETFGLPDSMFGRFREYQEMRERND 140 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 +++ YD + + L + L+ E + + Sbjct: 141 LMATQYD----------------------------PSMVEGLAMGLVHTTFNEGVCLMGA 172 Query: 213 FACSFAFAE---------RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 FA F R +G KI + RDE +H+ G+ + + + P + Sbjct: 173 FANLLQFNRFDVPGFNGYRGRYKGLTKINKWSLRDEGIHVEGSSLLYR--KVMGEHPWL- 229 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 + +E K++ YDL E + D F+ + + KD YV Y+ N R+ +G Sbjct: 230 -MTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLT-MTKDESKAYVRYMMNRRLLQLGHK 287 Query: 324 LPFQTRSNPIPWINTWLVSDNVQ--VAPQEVEVSSYLV-GQIDSEVDTDDLSNF 374 F+ + P PWI L + E V +Y G + E+D ++ Sbjct: 288 AIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQASGALVGELDWSKVNQL 341 >UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Bacteria RepID=C9XQ14_CLODC Length = 323 Score = 226 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 147/348 (42%), Gaps = 40/348 (11%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TLL Sbjct: 10 NAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLL 69 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIV 142 D+ QG + +++ L + + + E IH++SY+ I ++++ +F+ I Sbjct: 70 DTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIE 129 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 T +Q++A+ + + Y+ ++ LYL +++ Sbjct: 130 TEPTLQRKADLVLAQYENTTN---------------------------QEGLYLSMVTSV 162 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 LE+ FY F + + M + +II LI RDE+LH + + D + Sbjct: 163 FLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLAQEIYDSFDKMD- 221 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + +++ Y + + E ++ + ++R+ + + + +++Y N ++ +G Sbjct: 222 ---KKMLEEKMYSILYSLMENEIEYTNVIYRESGL----EKEVVNFLKYNANRALENLGF 274 Query: 323 DLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 + + + NPI + L ++ + + Y G + D D Sbjct: 275 EKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQKGVYEELEDED 320 >UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystivirus RepID=Q678G9_9VIRU Length = 374 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 133/355 (37%), Gaps = 42/355 (11%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--ALPEHEK 71 LK +F Y Y +L + W +E+ ++ D D++ L + EK Sbjct: 60 LKRRLFEYNAS----YKPFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEK 115 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 L+ T LD G+ + +P+ E+ + ++A E H ++Y ++ + + Sbjct: 116 KFITQILRLFTQLDVSVGQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYA-LLNDTL 174 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 P + + +Q+ + + +S + I Sbjct: 175 GLPESDYSAFLKYKQMTDKTDFMSDMRTDTIGN--------------------------- 207 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 + L+ E + + +F F +M+G K++ RDE +H+ G + Sbjct: 208 --VAFSLVKAVYNEGVSLFAAFVMLLNFQRFGVMKGMGKVVEWSIRDENVHVEGLCKLFK 265 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + S + ++ + L + + E + D +F + + L + + YV+Y Sbjct: 266 TIVSEYP----FILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKNLKRVDVINYVKY 321 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 I R +GL + NPI W+ +WL+S E V+ Y VG ++ + Sbjct: 322 ILQRRTVQLGLSNKTDLQ-NPILWV-SWLISGRDVTNFFENRVTEYDVGGLEGDW 374 >UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9V1_HYDS0 Length = 319 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 136/329 (41%), Gaps = 35/329 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID-YQALPEHEKHIFISNLKYQTLLD 85 + D Y L K + +W PEE D++ D+ + Y+ L + E+H + + + + + Sbjct: 23 YKLDSVVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAE 82 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 G++ + + I E ++ E H ++ +I+ + P V+ + Sbjct: 83 GWVGQNI-LEISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLDLKPHEVYAMHENVK 141 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 +I+++A+ L E + +L+ + + LE Sbjct: 142 EIKRKADFEVKRAMALCEEPTEENLIEDI-----------------------FVYYAILE 178 Query: 206 AIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 + F+ F AF R +++ A ++R I +DE HL ++LN L + + Sbjct: 179 GLFFFSGFVTPLAFGRRGVLKNVAALVRWILKDETRHLAFGIYLLNELLKDKNKNDY--- 235 Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 K + L +A E ++A + +IGL+ + YV+Y+ + RM+++G D Sbjct: 236 ----KDKFRVLMEEAVDIETEYARVAMPE-KIIGLSFETYTSYVKYLADRRMRSLGFDAI 290 Query: 326 FQTRSNPIPWINTWLVSDNVQVAPQEVEV 354 + + NP+ W+ T ++ E +V Sbjct: 291 Y-GQKNPMKWLTTQTDLPDL-TNFFEAKV 317 >UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase small subunit 376L n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR2_IIV6 Length = 360 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 123/356 (34%), Gaps = 39/356 (10%) Query: 34 YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSP 92 Y F +K W P EV + D D++ L ++++ + ++ T D + Sbjct: 15 YPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVDVASAY 74 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 LP +PE+ + +A E +H +Y++++ + P + + + E+++ + + Sbjct: 75 YTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLETL-GMPEATYKEFLMYEEMKDKQD 133 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL-EAIRFYV 211 I + D + GK E K+ + + + E ++ + Sbjct: 134 YIKKFSDS---------------RHILGKGEENLTTEDKEHIAAGIALFSGFTEGMQLFS 178 Query: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 +FA F M+G +I+ DE H G + + + ++ Sbjct: 179 TFAMLLIFPLNGFMKGMGQIVTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPSVLQE 238 Query: 272 ECYDLFVQAAQQEKDWADYLFRDG-----------------SMIGLNKDILCQYVEYITN 314 Y + + E+ + D +F+ GL L Y++YI + Sbjct: 239 TVYKIAKEMVGLEEAFIDLVFKKYKDEPINDDNDLETKDNKDFFGLTPQRLKAYIKYIAD 298 Query: 315 IRMQAVGLDLPFQTRS---NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 R+ +G F NP+P + +++ E + Y Sbjct: 299 RRLNLMGYKSIFNLEPYPTNPLPELE-IMINAPTHTNFFENRSTDYANVSTKGTWS 353 >UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit beta n=111 Tax=root RepID=RIR2_BACSU Length = 329 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 69/349 (19%), Positives = 148/349 (42%), Gaps = 39/349 (11%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 + A + + + D + + + FW PEE+ ++ D + ++ L ++E+ ++ L TLL Sbjct: 6 DAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLL 65 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSE-TIHSRSYTHIIRNIVNDP--SVVFDDI 141 D+ QG + + + + + + A E +H++SY++I + + VF+ + Sbjct: 66 DTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWV 125 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 N+ +QK+A+ I Y + ++ + L+ +++ Sbjct: 126 KQNKYLQKKAQMIVGLYKAI-------------------------QKDDEISLFKAMVAS 160 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F F + + + +II LI RDEA+H + + + + Sbjct: 161 VYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIY----NKQ 216 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 E E ++ DL Q + E ++ + L+ +GL+ D + +++ Y N + +G Sbjct: 217 TEEKKAELREFAIDLLNQLYENELEYTEDLYDQ---VGLSHD-VKKFIRYNANKALMNLG 272 Query: 322 LDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 D F+ NPI + L + ++ + Y ++ D D Sbjct: 273 FDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKKATVEPLKDDD 319 >UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain n=7 Tax=African swine fever virus RepID=RIR2_ASFB7 Length = 334 Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 133/358 (37%), Gaps = 46/358 (12%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E + + Q + +K S W +EVD+ +D D++A+P+ ++ + Sbjct: 9 EELLIENSQRFTIFPIQ-HPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYK 67 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 L + + D I + + I + E+ + A E +HS +Y+ ++ ++ D Sbjct: 68 QILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEK 127 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +F I + I+K A+ + + D + Sbjct: 128 EQQRIFSGIEKHPIIKKMAQWVRQWMD-----------------------------PDRN 158 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L L+ A+E I F F E+ +M G I+RDE +H + +++ Sbjct: 159 TLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNEFISRDEGVHCSFACFLISN 218 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD--GSMIGLNKDILCQYVE 310 + ++ + + +A + ++ +Y F G + G +K++L QY+ Sbjct: 219 YVYNIPEEKI----------IHKILKEAVELVDEFINYAFDKARGRVPGFSKEMLFQYIR 268 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 Y T+ + ++ NP P + + +++ + E+ + Y D Sbjct: 269 YFTDNLCFMMQCKSIYKV-GNPFPQMTKFFLNEVEKTNFFELRPTQYQNCVKDDAFAF 325 >UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain n=8 Tax=Fungi/Metazoa group RepID=B7XP84_ENTBH Length = 336 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 113/325 (34%), Gaps = 48/325 (14%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHI 73 EP+ + Q Y + + S FW EEVD++ D + L +E+ Sbjct: 24 GYEPLLDEAKKRYVIFPIQ-YPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFF 82 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 L + D I + + I E + + E IHS Y+ +I ++ D Sbjct: 83 IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142 Query: 134 PSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 +F+ I I+K+A + Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIAS------------------------------ 172 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 ++ +E I F SFA F +R LM G LI+RDE LH + Sbjct: 173 DTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLH 232 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + + D+ +A E+++ S+IG+N ++CQY+E Sbjct: 233 KYINNKCT-------------VIEDIVREAVAIEQEFLSESLP-VSLIGMNCKLMCQYIE 278 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPW 335 ++ + + A+G + ++ I W Sbjct: 279 FVADRLLFALGERKIYTFLTHSISW 303 >UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P4N2_FUSNV Length = 245 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 28/245 (11%) Query: 6 FSQTKNDQLK-EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F+ +D L + G N+ + +Y +L ++ FW PE+VD+++D+ DY+ Sbjct: 11 FNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKNDYE 70 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L E+ + L + LDSIQ + + ++ PE+ + F E IHS+SY Sbjct: 71 NLTVPEREAYDGILSFLIFLDSIQTNNI-PNISDHVTAPEVNLLLAIQTFQEAIHSQSYQ 129 Query: 125 HIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +II +I+ S ++D ++ + +R I+ Y + I+ S Sbjct: 130 YIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSD--------------- 174 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 + +++ LE++ FY F + A R M G + IIRLI RDE H Sbjct: 175 ---------ENFAKVIIANYLLESLYFYNGFNFFYLLASRNKMVGTSDIIRLINRDELSH 225 Query: 243 LTGTQ 247 + + Sbjct: 226 VVLFR 230 >UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit beta n=504 Tax=root RepID=RIR2_MYCLE Length = 325 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 81/354 (22%), Positives = 142/354 (40%), Gaps = 49/354 (13%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 V+ ++ + D ++ ++ FW PE+V VS D + L EK + + TL Sbjct: 12 VSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTASEKQLTMRVFTGLTL 71 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDI 141 LD+IQG V+L+P P E AF E++H++SY+ I + + F Sbjct: 72 LDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTAEIDEAFRWS 131 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 N +Q++A+ + YY LK+K ++ Sbjct: 132 EENNNLQRKAKIVMEYY--------------------------RGDEPLKRK-----VAS 160 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F ++ R + A +IRLI RDEA+H + DD Sbjct: 161 TLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLVLVDDAR 220 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 A E K+ Y+L + E ++ L+ +GL + + +++ Y N + +G Sbjct: 221 RA----ELKEYTYELLFELYDNEVEYTQDLYDR---VGLT-EDVKKFLRYNANKALMNLG 272 Query: 322 LDLPF---QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI----DSEVDT 368 + F +T NP ++ + + SSY++G+ D + D Sbjct: 273 YEALFPRDETDVNP-AILSALSPNADENHDFFSGSGSSYVIGKAVVTEDEDWDF 325 >UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7_9CAUD Length = 387 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 81/388 (20%), Positives = 159/388 (40%), Gaps = 35/388 (9%) Query: 5 TFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F+ K+D + G + Y +L ++ W E D S ++++ Sbjct: 11 IFNVAKSDYHLPEIILGDDPGLLDSIHTHYPKMWELYKRLKMLDWDELEFDFSTCLVEFE 70 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 + + I L +Q DS+ RS L P+++ + +E +H+ +Y+ Sbjct: 71 TCDKSTYDMMIKTLAWQWEADSVASRSIVNILSPVMTDSRVWAGYVRINDNEDVHALTYS 130 Query: 125 HIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 I+RN DP V+ D+I+ E+ Q+R ++ E + + L Sbjct: 131 EIVRNSFKDPKVILDEILRVEEAQERMVAVARTMGEAHDAVHAYAL-----------NQV 179 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE-ALHL 243 + +EL K+++ +++ LE I+F SFA +FA + A ++ IA+DE +H Sbjct: 180 PNDQELYNKVFMFFIALYFLERIQFMASFAVTFAIGRTGAFQQIAAAVKKIAQDEFEIHA 239 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLNK 302 Q ++ L + +CK + +L + + E W +YLF +G + G+N Sbjct: 240 QYGQEVIRALLAT---ERGKLAYSQCKDKIIELLWEIVKTEVTWINYLFSEGRELTGVNA 296 Query: 303 DILCQYVEYITNIRMQAV------------------GLDLPFQTRSNPIPWINTWLVSDN 344 L +V + N + G D + + NP+ ++ +L + Sbjct: 297 TKLINWVLFNANAAATFLSIENDVVEQYQVEFKESAGFDFVWPEK-NPLLYMEDYLDISS 355 Query: 345 VQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 Q +PQE E Y+V ++ + ++ Sbjct: 356 TQASPQEEEKPDYMVNVVNDVGEEEEFE 383 >UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=C7NA19_LEPBD Length = 335 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 72/349 (20%), Positives = 135/349 (38%), Gaps = 36/349 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 ++ + D E E+ L FW E S+D + +L K ++ L TLLD+ Sbjct: 9 VNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVLGGLTLLDT 68 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIVTN 144 +Q + ++ I + + + ETIH++SY+ I + + F + N Sbjct: 69 LQSHTGMPKIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWVQEN 128 Query: 145 EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL 204 +Q +A I +YY ++ + K+ + + L + L Sbjct: 129 PHLQYKANKIDTYYQKM-----------------------NNPEASKRDIAMALAASVYL 165 Query: 205 EAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 E FY F A + M + II+ I DE++H + L + + E A+ Sbjct: 166 ETYLFYSGFFLPLWLAGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKAD 225 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 + E K+ YDL + E + D ++ D + G + +Y+ Y N + +G + Sbjct: 226 MRAELKKLMYDL----YENETRYTDEIYGDLGLTG----NVKEYIRYNANKALMNLGFEE 277 Query: 325 PFQTR-SNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 F+ + NPI + L + Q + ++Y + DD Sbjct: 278 EFEVKNVNPI--VLNGLNVETTQHDFFSKKSTNYEKALEVVHLHDDDFK 324 >UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bacillaceae RepID=B1HSG7_LYSSC Length = 318 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 134/349 (38%), Gaps = 41/349 (11%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 +++ ++ + ++Q W PEE+ VS+D +++ + + TLLD+ Sbjct: 5 VNWNKATSELAQIFWDQQWKQIWFPEEIAVSKDIQQWKSF--EHQDTYKKVFAGLTLLDT 62 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIVTN 144 +Q + + + + + E IH++SY++I + + +F+ + N Sbjct: 63 VQTNIGMNRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWVKKN 122 Query: 145 EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL 204 E +Q +A I+ Y+ + E + L+ + S L Sbjct: 123 EYLQYKANKIADIYNSIEEG-------------------------DAESLWKAMFSSVML 157 Query: 205 EAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 E+ FY F + + +A+II LI RDE++H L E Sbjct: 158 ESFLFYSGFFYPLYLGGQGFLRNSAEIISLILRDESIHGVAVGFFAQNLYKQFS----KE 213 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 E + Y+L + Q E + + ++ + GL+ + + YV Y N + VG + Sbjct: 214 KQEALQLWGYELLLDLYQNEMKYTEDIYAE---TGLSPE-VKAYVRYNANKALMNVGFEA 269 Query: 325 PFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 F NPI + + ++ + ++Y ++ D D + Sbjct: 270 MFPEEEVNPI--VMNGIRNEGSTYDFFSQKGATYAKAKVAPITD-DTFN 315 >UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta subunit n=2 Tax=Granulicatella RepID=C8NFG6_9LACT Length = 346 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 129/346 (37%), Gaps = 42/346 (12%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 ++Q + I + EK FW + VS D D++ L EK + TLLD+ Sbjct: 35 IDWNQVEDMIDKLTWEKLTEQFWLDTRIPVSNDLDDWRTLSPAEKDVVGKVFGGLTLLDT 94 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTN 144 +Q + + E F E++H++SY+ I + + +F+ N Sbjct: 95 LQSEEGASLMKDYVRTQHEEAVWNNIQFMESVHAKSYSTIFSTLHTKAEIEDIFEWTNNN 154 Query: 145 EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL 204 E +Q +A+ I+ Y K ++ L Sbjct: 155 EYLQFKAKKINEIYQS-------------------------------KDALKMKVASTML 183 Query: 205 EAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 E FY F + + A+II+LI RDE++H T T + + + E Sbjct: 184 ETFLFYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYTGYKFQQGYNELSEQE--- 240 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 EE K Y+L ++ Q E + ++ +G + + ++ Y N +Q +G D Sbjct: 241 -QEEMKMWVYNLCLELYQNEVKYTQSIYDQ---VGWTEK-VKVFIRYNANKALQNLGFDP 295 Query: 325 PFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 F T + P + + + + YL+G +++ D D Sbjct: 296 LFPDTAEDVDPIVMNGISTGTSNHDFFSQVGNGYLLGSVEAMDDED 341 >UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR2_MIMIV Length = 417 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 73/371 (19%), Positives = 140/371 (37%), Gaps = 52/371 (14%) Query: 10 KNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPE 68 + +KEP+ + + KY + Q+ +W EEVD+++D D+ L + Sbjct: 93 NDVIMKEPILSLKSEQYTVHP-IKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSD 151 Query: 69 HEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 +++ + L + D I + L+ ++ I E E E H Y+ ++ Sbjct: 152 DDRNFIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLT 211 Query: 129 NIVND---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 V D + + + I T I+K+A+ + + Sbjct: 212 TFVKDDALRNKLINSIKTMPSIKKKADWCNKWIKS------------------------- 246 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAEREL--MEGNAKIIRLIARDEALHL 243 K L++ + +E + F SFA F RE+ M G + IARDE H+ Sbjct: 247 -----DKTYAHKLVAFSIVEGVFFSGSFASIFWLKTREMHVMPGLIISNQFIARDENKHV 301 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 M +LL + + + +I +E + + + ++G+N + Sbjct: 302 ELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFINDSL------------PCKLLGMNSE 349 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 ++ QY++Y+ + + +G F NP ++ V V+ E +Y ID Sbjct: 350 LMSQYIKYVADRLLVDLGYRKKFNVD-NPFEYMKKIDV--FVKANFFEKRNDAYSNANID 406 Query: 364 SEVDTDDLSNF 374 +E L NF Sbjct: 407 NEKKIVFLENF 417 >UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib beta subunit n=23 Tax=root RepID=A5VIB8_LACRD Length = 339 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 68/353 (19%), Positives = 133/353 (37%), Gaps = 44/353 (12%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 +++ I + EK FW + V+ D D++ L + + Sbjct: 10 NQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRELDDDHQWTVGHVFGGL 69 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFD 139 TLLD++Q + AL + P + F E++H++SY+ I + + +F+ Sbjct: 70 TLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIKEIFE 129 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 T E +Q +A I++ Y + S LKKK + Sbjct: 130 WSDTEEYLQNKAVKIANMY------------------------LDPSQDPLKKK-----V 160 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE FY F + + A+II+LI RDE++H T + + + Sbjct: 161 ANVFLETFLFYSGFYTPLYYLGHNKLNNVAEIIKLILRDESVHGTYIGYKFQVGLRDRTE 220 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + ++ K Y+ + E+ + L+ +G D+L ++ Y N + Sbjct: 221 KQ----QQDMKDWMYNFLYELYDNEEKYTHLLYDQ---VGWTDDVLT-FIRYNANKALMN 272 Query: 320 VGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 +G D F + NP+ + + + + Y +G +++ D+D Sbjct: 273 LGQDPLFPDTASDVNPV--VMNGISTSTSNHDFFSQVGNGYRMGAVEAMNDSD 323 >UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diphosphate reductase small chain n=2 Tax=Hydra magnipapillata RepID=UPI00019243CE Length = 363 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 134/367 (36%), Gaps = 52/367 (14%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + Y + K D +E + V + K+ + L +KQ +W EE+D S DR Sbjct: 25 LEYDANDEKKKDSEEEILNKDLSRLVVKPINSKHKVIWDLYKKQKDAYWTAEEIDFSNDR 84 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 D+ + ++ +H L + DSI + L I++ E E E HS Sbjct: 85 HDFLKVDKNIQHFIKRILAFFAGADSIVNINIKKKLSK-ITVKEAEIAYGFQQMMEDTHS 143 Query: 121 RSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 Y ++ I+ DP + + T I++ + + + Sbjct: 144 EVYADMLIKIITDPVERDELINAFKTVASIKRMIQWAQRWINS----------------- 186 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE---RELMEGNAKIIRL 234 K+++ ++ E + F +FA + + ++M+G + L Sbjct: 187 -------------KRRIGYSIVVFCIFEGLMFSGAFAGIYWLKKILGEDIMKGLIQSNNL 233 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 IA+DE +H + + E+ E+ +E + C A Sbjct: 234 IAKDEGMHTIFGCVIYTFIIYRLSFEEICELMKEAVEICKSFTKDAICV----------- 282 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR-SNPIPWINTWLVSDNVQVAPQEVE 353 MIG+N +++ Y+EY+ + M +G + F T+ + +++T + + E Sbjct: 283 -DMIGMNVELMYNYIEYVADRLMVYLGYEKIFMTKIPDQFQFMDTIGFLN--KDNFFERR 339 Query: 354 VSSYLVG 360 + Y Sbjct: 340 ATEYQKA 346 >UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_AQUAE Length = 696 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 109/273 (39%), Gaps = 29/273 (10%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ-LSFFWRPEEVDVSRDRIDYQA- 65 Q + K + G P N+ ++ KY L + + FW PEE+ + DR Y+ Sbjct: 18 QGDREASKRKIIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQYETV 77 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L ++EK + L + LDS Q +I+ PE+E + F E++H+ SY Sbjct: 78 LSDYEKRAYELVLSFLIALDSFQVDMLKE-FGRMITAPEVEMAITAQEFQESVHAYSYQF 136 Query: 126 IIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 I+ ++V+ +++ +E++ +R + I+ Y+E I + Sbjct: 137 ILESVVDPVKADEIYNYWREDERLLERNKVIAELYNEFIRKPNE---------------- 180 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 + + LE++ FY FA + + M + I+ I RDE + Sbjct: 181 --------ENFIKATIGNYILESLYFYSGFAFFYTLGRQGKMRNTVQQIKYINRDELCFI 232 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 GT+ + + ++ + E ++ Sbjct: 233 EGTEVLTKRGFVDFRELREDDLVAQYDIETGEI 265 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 64/122 (52%), Gaps = 6/122 (4%) Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 H+T ++++N LR ++PE+ E ++ + F A +E W Y+ ++ ++G Sbjct: 575 NCHVTLFRNIINTLRK--ENPEL--FTPEIEKWIVEYFKYAVNEEIKWGQYVTQN-QILG 629 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 +N ++ +Y++Y+ N+R+ +G D + + NP+ WI+ + +N + + + +Y Sbjct: 630 INDVLIERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYS 689 Query: 359 VG 360 Sbjct: 690 KA 691 >UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta subunit n=83 Tax=root RepID=Q5HMW6_STAEQ Length = 340 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 140/346 (40%), Gaps = 42/346 (12%) Query: 40 LIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPL 99 ++ + W EE S+D ++ L E+ ++ L T LD+ QG L Sbjct: 22 YWKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKALSGLTGLDTTQGTEGMPLLAFH 81 Query: 100 ISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVF---DDIVTNEQIQKRAEGISS 156 + E IH +SY+HI +++ + + + N+ + K+ + I++ Sbjct: 82 YPEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKEWVPANKYLNKKTKLITT 141 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 Y +L++ +++Y+ + S LE+ F+ F Sbjct: 142 NYYKLLK-----------------------PNPTDREIYVAMASSIFLESFLFFSGFYYP 178 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 A + M + +IIR I DE +H +GT + ++ E +I +E +L Sbjct: 179 LYLAGQGKMVHSGEIIRKIILDETIHGSGTGYAAQVIFDKFSKEEQEDIRKELM----EL 234 Query: 277 FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS-NPIPW 335 F Q E ++A L+ +GL +D++ +Y++Y N + +G + F NPI Sbjct: 235 FDQLYFNEVEYAASLYDK---LGLTEDVI-RYIQYNGNRALMNLGWETVFNPEPFNPI-- 288 Query: 336 INTWLVSDNVQVAPQEVEVSSY-----LVGQIDSEVDTDDLSNFQL 376 + L +D V+ Y V D + D +++ +++L Sbjct: 289 VENGLRTDTTNHDFFSVKGDGYTLALNQVPLRDKDFDFNNVISYEL 334 >UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=Alphabaculovirus RepID=A0EZ20_9ABAC Length = 341 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 122/334 (36%), Gaps = 22/334 (6%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 ++ + + W+ EE D+SRD D+ L E+ L + D+I + Sbjct: 19 LWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASADTIVNINLIDY 78 Query: 96 LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQIQKRAE 152 + + E + + E +HS Y+ ++ + + + + + I+K+A+ Sbjct: 79 VRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAFDRIDCIKKKAQ 138 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 + + W + + KL +++ +E I F S Sbjct: 139 WALKWTES------KWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFAIVEGIFFSGS 192 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 FA F + LM G LI+RDE LH N + + Q+ Sbjct: 193 FAAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYYNNYIPINE--------KLSPQQ 244 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNP 332 +F++A EK++ ++G+N +C+Y+E++ + + + F T NP Sbjct: 245 ILSMFIEAVDIEKEFFTTALP-CYLLGINATEMCKYIEFVADRLLVELRQPKHFNT-PNP 302 Query: 333 IPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 ++ +S + E V Y +V Sbjct: 303 FNFMTN--ISLEGKTNFFERRVGEYKRFGAGQDV 334 >UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Bacteria RepID=RIR2_MYCGE Length = 340 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 73/359 (20%), Positives = 133/359 (37%), Gaps = 47/359 (13%) Query: 19 FFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNL 78 F G + ++ + ++ + + FW PE++ VS D ++ L + + + Sbjct: 23 FQGN-LRSVNWNLVDDEKDLEVWNRIVQNFWLPEKIPVSNDIPSWKKLSKDWQDLITKTF 81 Query: 79 KYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV-- 136 TLLD+IQ ++ + + +AF +H+RSY I + + Sbjct: 82 TGLTLLDTIQATIGDICQIDHALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSEQINA 141 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 + +V E +QKRA+ + YY LK K+ Sbjct: 142 AHEWVVNTESLQKRAKALIPYY--------------------------TGNDPLKSKVAA 175 Query: 197 CLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 LM Y F F + R+ + + IIRLI RD+ +H + + Sbjct: 176 ALMP-----GFLLYGGFYLPFYLSSRKQLPNTSDIIRLILRDKVIHNYYSGYKYQRKLEK 230 Query: 257 ADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIR 316 +E K ++L + + EKD+ L+ ++ D ++ Y Sbjct: 231 LP----LAKQKEMKAFVFELMYRLIELEKDYLKELYEGFGIV----DDAIKFSVYNAGKF 282 Query: 317 MQAVGLDLPF---QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 +Q +G D PF +TR P + +D SSY++G + E + DD + Sbjct: 283 LQNLGYDSPFTAAETRIKPEIFAQLSARADE-NHDFFSGNGSSYVMG-VSEETNDDDWN 339 >UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD86 Length = 224 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 29/235 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TLL Sbjct: 10 NAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLL 69 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIV 142 D+ QG + +++ L + + + E IH++SY+ I ++++ +F+ I Sbjct: 70 DTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIE 129 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 T +Q++A+ + + Y+ ++ LYL +++ Sbjct: 130 TEPTLQRKADLVLAQYENTTN---------------------------QEGLYLSMVTSV 162 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 LE+ FY F + + M + +II LI RDE+LH + + Sbjct: 163 FLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLAQEIYDSF 217 >UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Deinococcus RepID=Q1IXG4_DEIGD Length = 319 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 110/314 (35%), Gaps = 42/314 (13%) Query: 23 PVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQT 82 + + + + +Q + W EE+ ++ D D++AL E+ + Sbjct: 2 SKSATNWSEVGDGFTQAFYIQQQAQLWFSEEIPIASDAADWRALSPAERTCYTRVSAGLN 61 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV--NDPSVVFDD 140 +D++QG L + + + +AF E +H+RSY+ + + ++ F+ Sbjct: 62 AMDTLQGEVGMPLLAAGEDDHQRKATLAMFAFMENVHARSYSMANKTFLSASEEREAFEW 121 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 I +Q++ Y+E +T +++ Sbjct: 122 IEMQPHLQRKITVFRRLYEEGDALTR-------------------------------MLA 150 Query: 201 VNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 LE FY F A + M ++ LI DEALH + + + Sbjct: 151 SCLLETALFYSGFFYPLYLAGQGKMSHMGEVFTLICADEALHGSYVGLLFQERFAALPQG 210 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 E A + +Q + + E + D ++ + + + +V Y NI + Sbjct: 211 EQAAVRARFEQLAREF----YENECAYTDEVYAEVGL----ASEVKTFVRYNFNICCDNL 262 Query: 321 GLDLPFQTRS-NPI 333 GL+ F NP+ Sbjct: 263 GLERLFPEEEVNPL 276 >UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Bacteria RepID=A1XG51_BORHD Length = 321 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 126/355 (35%), Gaps = 42/355 (11%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 Q +++ + ++ + FW EE+ +S D++ + L E+ ++ L Sbjct: 3 QNREAINWNRLNNSYTKMFWDQNIRQFWVDEEIPISDDKLVWNTLDGEERDVYEKVLGGL 62 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFD 139 TLLD+ QG L I + + + E +H++SY+ I ++ ++ +F Sbjct: 63 TLLDTEQGSVGMPRLALAIDNLDYKPVLGFMGAMEHMHAKSYSSIFSSLSNIDRIDHIFG 122 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 + T Q + + I Y+ + + LY L Sbjct: 123 WVKTYRNFQDKLDLILGKYNSI---------------------------HDRMSLYKALC 155 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE FY F A + M + +II LI RDE++H LL + Sbjct: 156 TSVFLETFLFYSGFFYPLYLAGQGKMVNSGEIINLILRDESVHGVFVG----LLAQEEFN 211 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + ++E + + E + L+ + G + +V Y + + Sbjct: 212 KMTFKEQAFAQREATLILERLYYLESAYTKDLYSSIGLEG----AVDVFVRYNADKALMN 267 Query: 320 VGLDLPFQTRS---NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 +G D F R NP+ + L ++ + + Y+ + DD Sbjct: 268 LGFDSAFNIRDIDVNPL--VLNGLRTNTKTHDFFSTKGNGYIKPMRVEPLQDDDF 320 >UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain 2 n=7 Tax=Saccharomycetaceae RepID=RIR4_YEAST Length = 345 Score = 174 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 125/356 (35%), Gaps = 47/356 (13%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 K + E + + KY +K + FW EE+++++D D+Q L Sbjct: 17 DMKEAEKDEILLMENSRRFVMFP-IKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLT 75 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + +K + L D++ + + PE +++ E I+S Y+ ++ Sbjct: 76 DDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMV 135 Query: 128 RNIVNDPSVV--FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 DP + F +I +++ +A I + Sbjct: 136 DAFFKDPKNIPLFKEIANLPEVKHKAAFIERWIS-------------------------- 169 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 L++ A E I ++A F ++++M G A R I RD + Sbjct: 170 ---NDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDF 226 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 + + LR+ + + + + +A + EK++ G++ + Sbjct: 227 SCLLFAHLRTKPNPKIIEK-----------IITEAVEIEKEYYSNSLP-VEKFGMDLKSI 274 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 Y+E++ + +Q G + + NP ++ V+ + E +VS Y Sbjct: 275 HTYIEFVADGLLQGFGNEKYYNAV-NPFEFMED--VATAGKTTFFEKKVSDYQKAS 327 >UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 Tax=Caenorhabditis elegans RepID=Q20993_CAEEL Length = 500 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 33/224 (14%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 EP+ + + + +K ++ FW EEVD+ +D ++ L E+ Sbjct: 307 EPLLAPNNNRFVVHPIV-HRDIWEFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFIS 365 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND-- 133 S L + D I + + + E + E IHS Y ++ + D Sbjct: 366 SILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDA 425 Query: 134 -PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +++F+ I T + I+ +A+ + + Sbjct: 426 ERNILFNAITTFKFIKAKADWCLRWISD-----------------------------HNA 456 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 L +V A+E I F SFA F +R L+ G LI+ Sbjct: 457 PFSERLAAVAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELIS 500 >UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0JA50_BLASP Length = 357 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 132/350 (37%), Gaps = 36/350 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLD 85 + +Y + KQ + W E+++ D D+ + L + EK++ LK + Sbjct: 8 LNFKPFEYQWAYEYWFKQQNAHWLHTEINMQSDIYDWNKNLTDQEKNVIGDILKGFAQTE 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 + G + + IPE++ + + ETIH+ +Y+++ + D F + ++ Sbjct: 68 TEVGNYWSEMIPKWFPIPEIKMMGQAFGSFETIHAAAYSYLNDILGLD---NFHAFLEDD 124 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I + + + N + E+ + + L + E Sbjct: 125 VIMNKLKSLMDV--------------------RNSDHGKYNKEEIARSVALFSAAA---E 161 Query: 206 AIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 ++ + SFA +F + ++G + I RDE+LH + E + Sbjct: 162 GVQLFSSFAVLLSFRKSNRLKGVGQQIIFSVRDESLHSEAGCKIFRTFCE-----ENKGL 216 Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 E ++ Y A + E + D +F + + ++ L +++ N++++ +G Sbjct: 217 KEIVERSVYHGVDLALKNEFVFIDKIFGGRDLCTIKREELKNFMKDRANMKLRELGFFDS 276 Query: 326 FQTRSNPIPWINTW--LVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSN 373 + + +N + +S Q + + Y + + + + D S+ Sbjct: 277 YHVDRRMLDNMNWFYITISGEQQTDFFDNRETGY--SKPNEDWNEDLFSS 324 >UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome shotgun sequence. (Fragment) n=2 Tax=Euteleostomi RepID=Q4TC55_TETNG Length = 369 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 4/147 (2%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + Q Y ++ +K + FW EEVD+S+D +++L + E+ Sbjct: 1 EEPLLKENPRRFVIFPIQ-YQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFI 59 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + + E + E IHS Y+ +I + +P Sbjct: 60 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEP 119 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYY 158 S +F+ I T ++K+A+ ++ Sbjct: 120 SEREYLFNAIETLPCVKKKADWALNWI 146 >UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TFJ9_VANPO Length = 351 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 123/347 (35%), Gaps = 53/347 (15%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--A 65 + K Q E + + KY +K+ + FW EE+D S+D ++ Sbjct: 18 ELKELQKDESILTENKRRFVLFP-IKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDK 76 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 + + EK FI L D + + L PE + + + IH Y Sbjct: 77 ITKDEKEYFIRLLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGI 135 Query: 126 IIRNIVND---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +I ++V D + +F++I I+++ E S+++ Sbjct: 136 LIDSLVKDDEKRTSMFEEIKDLTNIKEKIEYAKSWFE----------------------- 172 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L++ A+ I ++ +F + L+ G + + RD LH Sbjct: 173 ------NEDNLFGEKLIAEAAVLGIFSLSAYVSVLSFQKGGLIPGFVTGVDNMLRDRGLH 226 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 + M L++ D + + V A + EK L + +I +N Sbjct: 227 VDFCCLMYAHLKNQID-----------SEIVQKIIVDAVEIEKK---SLLKALPIIKVNL 272 Query: 303 --DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQV 347 D + Q++EY+ + + A G + + NP ++ ++ N Sbjct: 273 KIDEMNQFIEYVADSILVAFGNEKHYNAT-NPYEFMENVVLPGNTNS 318 >UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1H3S0_VITVI Length = 269 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 67/174 (38%), Gaps = 15/174 (8%) Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLL 253 L++ +E I F SF F ++ LM G LI+R E LH + +LL Sbjct: 98 FAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFACLLYSLL 157 Query: 254 RSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYIT 313 + Q+ + + +A + E + ++IG+ ++ Y++++ Sbjct: 158 QKQLPW-----------QKVHHIVHEAMEIETQFICEALP-CALIGMKATLMSHYIKFVV 205 Query: 314 NIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 + + A+G + + NP W+ + + + Y I S +D Sbjct: 206 DRLLVALGYERKYNVE-NPFDWME--FIFLQGNANFFQRRMGDYQKASIMSSLD 256 >UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Marseillevirus RepID=D2XAR5_9VIRU Length = 280 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 105/306 (34%), Gaps = 44/306 (14%) Query: 60 RIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLIS--IPELETWVETWAFSET 117 D+ L + EK L + D I + +S E+E + A +E Sbjct: 1 MSDWSKLTKGEKKFVKLELAFFAQFDGIVVENLVRNFQQEVSSYAKEIEWFYILQAANEL 60 Query: 118 IHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEG 174 IH+ +Y ++I N++ P D I I+ A + + D I + Sbjct: 61 IHNETYMNLIDNLLPSPKKREKALDAISNYPSIRLIANWVERWMDRRIPLPER------- 113 Query: 175 THTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRL 234 +++ ALE + F SFA F ++G K Sbjct: 114 -----------------------IIAFAALEGVIFTGSFAAIHYFTITNRLKGLRKANEW 150 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 I++DEALH + + + + ++ ++ A + R Sbjct: 151 ISKDEALHQRFAEAVYRYIVDV-----IKAFPRVSQERVQEILGSAIDAVSPFIHDCLR- 204 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEV 354 + ++ + + Y++ + ++G + F + S + ++ L+ + + E V Sbjct: 205 FKNVNIDAERMIGYMKNAADGLAFSLGYEKFFNSDS-SLDYM--LLIGMDNKTNFFEEVV 261 Query: 355 SSYLVG 360 + Y G Sbjct: 262 ADYAKG 267 >UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M646_CANTT Length = 252 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 5/152 (3%) Query: 13 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEK 71 + +EP+ + + ++I+ +K + FW EEVD+S+D D+ L ++E+ Sbjct: 87 EAEEPLLQENKRRYVMFPIKYHEIWN-FYKKAEASFWTCEEVDLSKDLDDWNNKLNDNER 145 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 + L + D I G + + PE +++ E IHS Y+ +I V Sbjct: 146 YFVSRVLAFFAASDGIVGENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLLIETYV 205 Query: 132 NDPSV---VFDDIVTNEQIQKRAEGISSYYDE 160 DP +F+ I I K+AE + + Sbjct: 206 KDPQEADFLFNAIENIPCITKKAEWAIKWIQD 237 >UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Ostreid herpesvirus 1 RepID=RIR2_OSHV1 Length = 579 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 67/371 (18%), Positives = 132/371 (35%), Gaps = 56/371 (15%) Query: 15 KEPMFFGQPVNVARYDQQK---------YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 P++ G + + Y K S W+ E+D D ++ Sbjct: 51 DHPLYGGATDHHKDIVGKYDHALLKPAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQ 110 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 + E+E+ L + + D++ + +PE + +++ +E +H R Y + Sbjct: 111 ISENERDCVRKVLAFFAVGDTLVKDRIAI-FADEFPLPECKDFIDWQTVNEGVHQRVYNN 169 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 + +V D + D + + E + LG+ N + Sbjct: 170 YLDALVKDKIYLADLVNAYKD------------PEFAPIKKKVDWLGKIISVENDSRGEM 217 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 ++ EAI F SFA F M I RDE LH Sbjct: 218 ------------VVGQVCTEAIMFAASFAILLKF-RAPYMRALVLGNEFIRRDETLHFRF 264 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 +L L+ D + +L +A + E ++A+Y+ +G + + KD L Sbjct: 265 YAELLRLMPDRPSD-----------ERIAELLTEATEIELEFAEYVVPEG-VKYITKDRL 312 Query: 306 CQYVEYITNIRMQAVGLDLPF-QTRSN----PIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 Q+V+ TN + + ++ + + N P+ ++NT + ++ E + + Y Sbjct: 313 IQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNT--LESEQKINFFEGKATEYNTK 370 Query: 361 QIDSEVDTDDL 371 Q VD ++L Sbjct: 371 QYK--VDFNNL 379 >UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TLQ4_VANPO Length = 361 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 138/379 (36%), Gaps = 67/379 (17%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QAL 66 + + Q KEP+ + + +++ +K+ + FW EE+D S D I++ + Sbjct: 32 EVEESQSKEPILMENKSRFVLMPIKFHTVYDG-YKKREALFWPAEEIDFSHDIINWGKKA 90 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNV-ALLPLISIPELETWVETWAFSETIHSRSYTH 125 +H+K I +L + S+ G + + IPE + + E IH Y+ Sbjct: 91 SDHDKSIIKKSLAFLCS--SVLGSFYLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYSL 148 Query: 126 IIRNIVNDPSVV---FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 I +V++ + F D+ + I+++ ++D+ + Sbjct: 149 AIDQLVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDKESSL------------------ 190 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L++ +++EAI VSF + +++++ G I+LI +D +H Sbjct: 191 -----------FAEKLVAFSSIEAIFSLVSFFSIMSLEKKDIIPGLISGIKLILKDHIVH 239 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 + + L+ D + + +A + E + + + + + K Sbjct: 240 CDFQMSIYSELKKRLDPGIIE-----------RIVTEAVEIELETLEDDYFNKQLDKETK 288 Query: 303 DILCQYVEYITNIRMQAVGLDLPF-----------QTRSNPIPWINTWLVSDNVQVAPQE 351 + +EY+ + + G F + N IP + + + + E Sbjct: 289 ADIKNVIEYVGDRVLMGFGNQKHFHSANPYDNLEHECFENVIPKTESSDSQNTTKFSKTE 348 Query: 352 VEVSSYLVGQIDSEVDTDD 370 +S E+ DD Sbjct: 349 KIAAS--------EISFDD 359 >UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436B Length = 322 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 116/303 (38%), Gaps = 37/303 (12%) Query: 34 YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSP 92 Y + + Q S FW +E++V +D D + + E E H I+ L+ TL + + GR Sbjct: 15 YPEAIQFAKVQSSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLFTLYELVAGRDY 74 Query: 93 NV-ALLPLISIPELETWVETWAFSE-TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKR 150 + +L P++E T+ F E +H+ Y I ++ + + V + +++R Sbjct: 75 WLGRVLKTFPRPDIERMAATFGFFELNVHAPFYNKINEALMLNTDEFYLAYVNDPILKER 134 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 E + S +E L + + +E Y Sbjct: 135 MEFVDSLVEE-------------------------------DDPLYSLGAFSMVEGAVLY 163 Query: 211 VSFACS--FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 SFA F + + + I RDE LH G + N L+ E I Sbjct: 164 SSFAFLKHFQAKGKNKLMNVVRGINFSVRDENLHCEGGAWLYNTLKQEI-KSEGGYINPN 222 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQT 328 + + + A+ E D +F G M G+ + + +V+ NI + +G++ F+ Sbjct: 223 LEYDLANCAHTIAEHEFRIVDMIFEKGEMEGITAEQMKTFVKSRVNICLAQLGIEPVFEV 282 Query: 329 RSN 331 +N Sbjct: 283 SNN 285 >UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=Q19CR4_9CAUD Length = 332 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 115/339 (33%), Gaps = 43/339 (12%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQG 89 KY F KL ++Q+ FW +E V D D + L E + + LK T+ + G Sbjct: 18 IIKYPEFGKLADEQMHAFWPWDEPVVDNDIQDLRTKLTPGELNGITTVLKLFTIYERKVG 77 Query: 90 RSPNVALLPL-ISIPELETWVETWAFSETI-HSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + PE+ ++ E H+ Y + + D + +E++ Sbjct: 78 EDYWSGRIAHTFGRPEINRMATLFSAVEGNSHAPFYNKVNEVLYLDDEAFYTSWKESEEL 137 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +R + + ++ + + +E Sbjct: 138 SRRIQFVGKSVNDPDD-------------------------------AKSFAAFTFIEGA 166 Query: 208 RFYVSFACSFAFAER----ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 Y SFA F + +LM + + L DE H G + L + Sbjct: 167 VLYSSFAFLKHFQAQECGKDLMRNICRGVDLSVADEHHHSIGGAMLFQTLCREMKEKYGE 226 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 ++ + K + ++ Q E D +F + + G+ D L +V+ N+ ++ +G + Sbjct: 227 DVRAKLKNDIINMARQVFDHESGIIDLVFAE-PIDGITADELRVFVKSRINLCLENLGYE 285 Query: 324 LPFQTRSNPI-PWINTWLVSDNVQV-APQEVEVSSYLVG 360 F+ +NPI W + + + S Y + Sbjct: 286 PIFEIENNPIADWF--YRTINAKKFHDFFTGSGSEYNIN 322 >UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), beta subunit n=6 Tax=Bacteroidetes RepID=C6X1E6_FLAB3 Length = 324 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 136/344 (39%), Gaps = 39/344 (11%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRS 91 +Y + +E FW EVD + D D+Q+ L HEK+ + L ++ ++ Sbjct: 14 EYPEIMQFVEAINKSFWVHSEVDFTADVQDFQSQLEPHEKNAVKNALLAIAQIEVSV-KT 72 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 L + PEL T+A E HS +Y+ ++ + + F+ +V I+KR Sbjct: 73 FWGNLYNHLPKPELNGLGSTFAECEFRHSEAYSRLLEVLGYN--DAFNHVVEIPAIKKRI 130 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 + +S+ + K+ + L+ +E + + Sbjct: 131 DFLSNVLK------------------------HANSTTPKEYVSSLLLFSILIENVSLFS 166 Query: 212 SFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 FA +F + M+ + II + DE +H +++N +R D + + Sbjct: 167 QFAIILSFTRFKGYMKNVSNIIAWTSVDEQIHANAGIYLINKIREEQPD----LLTDSDI 222 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS 330 ++ Y L + + E + D++F G + ++K+ L +++Y + ++ +G+ + Sbjct: 223 EDIYTLVDHSIELEAEILDWIFEMGEIDNVSKENLLNFMKYRVDDSLKKIGMQTRYNVSG 282 Query: 331 N---PIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + P+ W + ++++ Y D + +DL Sbjct: 283 DEYRPMVWFEEEVFANSMD-DFFAKRPVDYTKH--DKSITENDL 323 >UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Brugia malayi RepID=A8PTX7_BRUMA Length = 288 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E + P + + +DI+ +K L+ FW +EVD+S+D D++ L + E+H Sbjct: 46 EILLAENPNRFVIFPIKFHDIW-DFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFIS 104 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 L + D I + + +PE + E IHS Y+ +I + D Sbjct: 105 RVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENIHSEMYSKMIDTYIRDQK 164 Query: 136 V 136 Sbjct: 165 Q 165 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 51/143 (35%), Gaps = 13/143 (9%) Query: 239 EALHLTGTQHMLNLLRSGADDPEMA---------EIAEECKQECYDLFVQAAQQEKDWAD 289 E +H M++ + EI ++ +F ++++ Sbjct: 145 ENIHSEMYSKMIDTYIRDQKQKKFRKFCVTLCFLEINLSNYKKFTSMFNACIDAKQEYLT 204 Query: 290 YLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAP 349 +IG+N ++CQY+EY+ + + + + + NP ++ +S + Sbjct: 205 EALP-VDLIGINCKLMCQYIEYVADHLLTELHCAKIYHSD-NPFDFME--RISIEAKTNF 260 Query: 350 QEVEVSSYLVGQIDSEVDTDDLS 372 E VS Y + S + + Sbjct: 261 FEKRVSEYQKAGVLSSEEGKSFN 283 >UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Corynebacterium phage P1201 RepID=A7IYE3_9CAUD Length = 237 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 94/265 (35%), Gaps = 34/265 (12%) Query: 109 VETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTS 166 ++ F E +H++SY+ + + + F + N+ Q + YD Sbjct: 1 MKQIGFMEEVHAKSYSSVFSTLFGSEDIDGAFAWVENNKATQVKKLVFDEAYDISDYNDR 60 Query: 167 YWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELME 226 G S LE+ FY F FA + + Sbjct: 61 RVEYYGAIIRA----------------------SSVLLESFLFYTGFYLPLHFASQGKLT 98 Query: 227 GNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKD 286 A +IRLI RDE +H + + GA + + K+ +L + E Sbjct: 99 NTADLIRLIMRDEGVHGYYLGYKFQKVMEGA----LPYERDAVKERVTNLACRLFVNEIP 154 Query: 287 WADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR-SNPIPWINTWLVSDNV 345 + ++ +GL+ + ++ Y N MQ +GL+ F + P I + L D+ Sbjct: 155 LIEEIYEP---LGLSAQ-VQTFLRYNLNKAMQNLGLENVFPAEMTRVEPRILSQLSVDSE 210 Query: 346 QV-APQEVEVSSYLVGQIDSEVDTD 369 + SSY++GQ + D D Sbjct: 211 ETHDFFSGSGSSYVIGQAEETTDDD 235 >UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain n=21 Tax=root RepID=RIR2_SHV21 Length = 305 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 112/337 (33%), Gaps = 54/337 (16%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 F +L ++ W P +V + D L E + + + + + + + L Sbjct: 16 FLELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIEDLL 75 Query: 97 LPLISIPELETWVETWAFSETIHSRSYTHIIRNIV-NDPSVVFD---DIVTNEQIQKRAE 152 ++ + E IH + Y +I+ + N+ + V+ DI+ + +Q++ Sbjct: 76 SQ-FDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKLR 134 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 ++ E + L + Sbjct: 135 WLNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGL------------------------ 170 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 F R +M G IARDE LH + + N + ++ P + Sbjct: 171 ------FRVRGIMNGICLANDYIARDEMLHTSAAALLYNTMTKSSERP--------SEDW 216 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF---QTR 329 Y LF +A + E + + + +N + Q+++ + ++++ L+ + Sbjct: 217 IYKLFREAVEVEFKFI--AAKGYGVSLVNVHEIRQFLQATADRILESINLNPIYGSLPPE 274 Query: 330 SNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 + P+ + S V E + S Y G + +++ Sbjct: 275 NCPLAY-----TSSTKSVNFFERDNSDYT-GTLTNDL 305 >UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ5_FLAJ1 Length = 324 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 130/351 (37%), Gaps = 41/351 (11%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLD 85 Y +Y + E +W EVD + D D+ A L EK ++L ++ Sbjct: 8 VNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHAHLSLAEKTAVKNSLLAIAQIE 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 +S + PE T+A E HS +Y+ ++ + + F+ ++ Sbjct: 68 VAV-KSFWGNIYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDE--FEKLLDVP 124 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL- 204 I++R + +S+ + + + +K + L+ + L Sbjct: 125 VIRRRVDYLSNVLKD-------------------------TKSQDNRKYMVSLILFSILI 159 Query: 205 EAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 E + + FA +F + M+ + II + DE +H G +++N +R D Sbjct: 160 ENVSLFSQFAILLSFTRFKGYMKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPD---- 215 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 EE + + E D D++F +G + + K L ++++ + ++ + + Sbjct: 216 YFDEETLALVRETVKDSIAVESDILDWIFEEGEIESIKKGDLVNFMKFRIDESLKQINIP 275 Query: 324 LPFQTRSN---PIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + F + + W + ++++ Y D + +DL Sbjct: 276 VIFDVKVEDYKALAWFEEEVFANSLD-DFFAKRPVEYTKH--DKSITANDL 323 >UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyostelium discoideum RepID=Q54E77_DICDI Length = 257 Score = 117 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 83/211 (39%), Gaps = 37/211 (17%) Query: 30 DQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQ 88 ++ K+ +K L+ W EE++ S D +D+ + L E+ F + L + I Sbjct: 80 NEISPLDIWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGII 139 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNE 145 ++ N + + IPE + + + +HS +Y+ +I + D ++ +F+ I T Sbjct: 140 NKNLN-RFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIP 198 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 ++K+AE + +E L+++ A E Sbjct: 199 CVKKKAEWALKWINE--------------------------------SFEKRLVALVAFE 226 Query: 206 AIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 +I F SF +R LM+G LI Sbjct: 227 SIFFSGSFRIISLLKKRSLMQGLTFSNELIN 257 >UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH Length = 231 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHI 73 +EP+ P + Q Y ++ +K + FW EEVD+S+D D++ L E+H Sbjct: 6 EEPILTPTPDRFCMFPIQ-YPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHF 64 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 L + D I + + + + I E + E IHS Sbjct: 65 IKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE 112 Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%) Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + E+ + + + A + E+++ +++G+N++++ QY+E+ Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALS-CALVGMNRELMSQYIEF 161 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL----VGQIDSEVD 367 + + + A+G + NP W+ L+S + E V Y + + Sbjct: 162 VADRLLAALGCGKVYGVT-NPFDWME--LISLQGKTNFFEKRVGEYQKASVMSSVHGNAA 218 Query: 368 TDDLSNFQL 376 +D F+L Sbjct: 219 FNDDHVFKL 227 >UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain n=247 Tax=Herpesviridae RepID=RIR2_HHV1K Length = 340 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 96/339 (28%), Gaps = 52/339 (15%) Query: 35 DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 L + W E+ D D L E E + + + D + + Sbjct: 44 PDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLG- 102 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV----TNEQIQKR 150 L L ++ + E HSR Y I + ++ + V + I+ + Sbjct: 103 GLSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVAGTINHPAIRAK 162 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + + + E + + L+ + Sbjct: 163 VDWLEARVRECASVPEKFILMILIEGIFFAASFAAIA----------------------- 199 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 L+ + LI+RDEA+H T + ++ N G P Sbjct: 200 -------YLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPP--------P 244 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL---CQYVEYITNIRMQAVGLDLPF- 326 Y LF QA + E + S I L+ L YV + + + + + F Sbjct: 245 DRVYGLFRQAVEIEIGFIRSQAPTDSHI-LSPAALAAIENYVRFSADRLLGLIHMKPLFS 303 Query: 327 -QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDS 364 P L+S + E +SY ++ Sbjct: 304 APPPDASFP---LSLMSTDKHTNFFECRSTSYAGAVVND 339 >UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Environmental halophage 1 AAJ-2005 RepID=Q2XUY1_9VIRU Length = 358 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 126/344 (36%), Gaps = 39/344 (11%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRS 91 +Y F ++ + +W +E + D DY+ E+ + ++ +Q ++ Sbjct: 48 EYTDFLDYVDAVRNSYWVHDEFNFDGDIQDYRVNTTPAEQTTIKRTMLAIAQIE-VQVKT 106 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 + + E+ T+A SE H +Y+H++ + + F+ I +Q+R Sbjct: 107 FWSDIYEDMPKAEVGNVGMTFAESEVRHMDAYSHLLDVLGIEDE--FEQITEVPAVQQRI 164 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 E + Y + S ++ + LM +E + + Sbjct: 165 EYLDEYLE------------------------MGSSENKQESVMGILMFSTFVEHVSLFS 200 Query: 212 SFACSFAFAER-ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 F +F + + +G A + +++E +H Q ++ +R D + +E Sbjct: 201 QFLIMTSFDKHEKKFKGIANAVEATSKEEQIHGLFGQELVETIREENPDLFDDDFTDE-- 258 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS 330 D QA + E + D++ DG + L ++ + +++ N + G+D F Sbjct: 259 --IQDACQQAYEAESEILDWILEDGELDFLPREHIDAFLKDRFNQSLDNAGVDPVFDPDE 316 Query: 331 NPIP---WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + + W + + + ++Y + V DD+ Sbjct: 317 DVVDETRWFDE-DIMMTKENDFFSKRSTTY--NKHTQSVTADDM 357 >UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q16J81_AEDAE Length = 244 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 3/104 (2%) Query: 52 EEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVET 111 +EVD+S+D D++ L EKH L + D + + + E + Sbjct: 141 KEVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYGF 200 Query: 112 WAFSETIHSRSYTHIIRNIVND---PSVVFDDIVTNEQIQKRAE 152 E +HS Y+ +I + D +F+ I ++K+AE Sbjct: 201 QIAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKAE 244 >UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VB17_NAEGR Length = 330 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 113/340 (33%), Gaps = 47/340 (13%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVD--VSRDRIDYQ 64 SQ K + E + P + Q ++E ++ S W E+ D + D Sbjct: 6 SQLKQLEKSEEILSENPHRFTLFPIQYPKLWEIYKKRLASSIWSVEQFDQIIRNDISKLS 65 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 + + L + + Q + A I I E + + + IH Y Sbjct: 66 EICNSDHSFIKIILAFLV-ANCKQKTNLWGAFKD-IQILEAKHFHGFRLAMKNIHYEMYC 123 Query: 125 HIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 ++ + + R+E I + ++ + Y + Sbjct: 124 NLFEILTEETE--------------RSELIEKMINSTMKKSQYTKKWLNSDNL------- 162 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 L+ + +E I SF F +R LM LI RDE H Sbjct: 163 ---------FSERLIGLVCIEQIFLSASFFSIFWLKKRGLMSALTISNDLIFRDEEFHSN 213 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 + + L+ + + + L +A EK++ L +I L+++ Sbjct: 214 FLYSLYSNLKHS----------KLPQTLVHSLVKEAVDIEKEFITSL--PTELIELDRNS 261 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344 + QYVE +++ + + G + F T N WI L++ + Sbjct: 262 MYQYVEVVSDNILISFGYEKLFHTE-NQCSWIQDMLMNKS 300 >UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib beta subunit n=7 Tax=Lactobacillus RepID=Q040X9_LACGA Length = 320 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 92/304 (30%), Gaps = 42/304 (13%) Query: 28 RYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSI 87 ++ + + + + P V + DR ++ LP+ E+ + + + L ++ Sbjct: 17 NWNAVEDQVDRSAWARLNDIVYEPRRVPIHEDRDEFSHLPKTEQTMLLHSFGSLALSSTL 76 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND---PSVVFDDIVTN 144 Q + + E + E+I++++Y H + F+ N Sbjct: 77 QMKVSLSKIKQDAENSEEAAVYNALQYLESINNKAYGHALTEFSTSNEQRDEAFNWANQN 136 Query: 145 EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL 204 +QK+ +++ Y + + T + Sbjct: 137 PYLQKKMRLLNTVYQSDNAIQKKAAHVFISTGLYH------------------------- 171 Query: 205 EAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 SF + + A++I+ R L+ T E Sbjct: 172 ------SSFFGPLYLFGQHKLPRTAELIKYALRITTLNGIYTGIKFRRDFFNLSKEE--- 222 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 + + YDL + E + L+ D + +D + Y+ Y N + +G + Sbjct: 223 -QKNIHKWVYDLCDRLYANELNHIHLLYEDTGL----EDKVEHYIHYTLNKALMNLGQEP 277 Query: 325 PFQT 328 + Sbjct: 278 KYPE 281 >UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative n=10 Tax=Plasmodium RepID=B3L3V1_PLAKH Length = 335 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 122/349 (34%), Gaps = 57/349 (16%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQAL 66 +Q +D LKE F + KY F ++ S FW E+ + +D+ +++ Sbjct: 15 AQNNDDILKENQF-----RWVMFP-IKYKTFWSYYKEVESLFWTAEDYNFDKDKKFLESI 68 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRS---PNVALLPLISIPELETWVETWAFSETIHSRSY 123 ++ + + +L D +L +I IPE + E IH Y Sbjct: 69 DKNMLVKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVY 128 Query: 124 THIIRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 I + D + + ++ + + K+ + ++ ++ I + L+ NG Sbjct: 129 ACIFETYIPDAKQKRTIINKVIQLDSVLKKQKWLTELFETNIPFYNKLVLIYISKVLFNG 188 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 + + + CL +V+ I RDE Sbjct: 189 TLNILIGYCKENSILPCLCNVH------------------------------EKIHRDEY 218 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LH + N L + + D F A + E +A + D S++ + Sbjct: 219 LHGDFSVMCCNHLNNKLK-----------YERLLDYFKMAVKLEYQFAIEML-DLSVLKI 266 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW--INTWLVSDNVQV 347 K+ + ++EY+ + + + F ++ P W N +VS+N + Sbjct: 267 KKEQVKSFLEYLADTMLVNLKHPKYFNSKY-PFTWPEFNKIVVSENQKT 314 >UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain n=9 Tax=Lactobacillus RepID=D0R5X4_LACJF Length = 313 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 98/304 (32%), Gaps = 41/304 (13%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 ++ + + + + P V + +D+ ++ LP++E+ + + + TL + Sbjct: 10 NNWNTVEEQVDHSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHSFGSLTLSST 69 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFDDIVTN 144 +Q + + E + E+I++++Y++++ ++ N Sbjct: 70 LQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDAYEWANQN 129 Query: 145 EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL 204 +QK+ + +++ Y + + L Sbjct: 130 PYLQKKMKFLNTVYQSGNAIQKK-------------------------------AAHVFL 158 Query: 205 EAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 ++ SF + + A++I+ R L+ T E + Sbjct: 159 STGLYHSSFFGPLYLFGQHKLPRTAELIKYALRITTLNGIYTGIKFRRDFFKLSKKEQNK 218 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 + YDL E L+++ + +D + Y+ Y N + +G + Sbjct: 219 VH----DWVYDLCDNLYDNELSHIKLLYQNTDL----EDKVEHYIHYTLNKALMNLGQEP 270 Query: 325 PFQT 328 + Sbjct: 271 KYPE 274 >UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subunit 1 n=23 Tax=cellular organisms RepID=Q3IM05_NATPD Length = 336 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 121/332 (36%), Gaps = 37/332 (11%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRS 91 +Y F + + +W E + S D D++ EK + + ++ +Q ++ Sbjct: 26 EYADFLDYKDAIRNSYWVHTEFNFSGDVQDFRTNTTPAEKTVIKRTMLAIAQIE-VQVKT 84 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 + + E+ T+A SE H +Y+H++ + F+++ I+ R Sbjct: 85 FWADIYDEMPKTEVGNVGMTFAESEVRHMDAYSHLLDILGITED--FEEVTDVPAIEDRI 142 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 E + Y ++ + ++ + L+ +E + + Sbjct: 143 EYLDKYLEK------------------------SESDDKQEYVMSILLFSTFVEHVSLFS 178 Query: 212 SFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 F +F + ++ +G A + +++E +H ++ +R D E+ + Sbjct: 179 QFLIMMSFDKYKKKFKGIANAVEATSKEEQIHGLFGVELVETIREENPD----LFDEDFE 234 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS 330 +E +A + E D++F +G + L + + ++ N ++ VG++ F+ Sbjct: 235 EEVQAACQRAFEAEMKILDWIFGEGELEFLPRTHVDAFLRDRFNQSLENVGVEPIFEPDD 294 Query: 331 NPI---PWINTWLVSDNVQVAPQEVEVSSYLV 359 + W + + ++Y Sbjct: 295 GLLEETRWFDE-DIMMTKDNDFFSKRSTTYNK 325 >UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187E616 Length = 184 Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 2/103 (1%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHE 70 + +EP+ + Q Y ++ +K + FW EE+D+S+D D+ + ++E Sbjct: 83 PESEEPLLKESKRRFVLFPIQ-YPEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRMNDNE 141 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWA 113 +H L + D I + + E + Sbjct: 142 RHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQI 184 >UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Tortoise herpesvirus RepID=Q4VWF1_9HERP Length = 215 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 71/231 (30%), Gaps = 35/231 (15%) Query: 40 LIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPL 99 L + W +E + D D+ L + + + D + L L Sbjct: 16 LRNLAIKNRWAEDEFMYTDDIKDFSRLDPEALDFYRFIFTFLSAADDKVNINL-DQLKQL 74 Query: 100 ISIPELETWVETWAFSETIHSRSYTHIIRNIVND----PSVVFDDIVTNEQIQKRAEGIS 155 ++ + T E +HSR+Y + + N+ + V++ I+ + + ++ Sbjct: 75 FPQKDVHHYYATQEDIECVHSRTYAGVQLALFNNDDDARRRYIEANVSHPTIETKFDWLN 134 Query: 156 SYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 + E + + L+ +E I F SFA Sbjct: 135 TKIMENESVPEKYLLM------------------------------ILVEGIFFVASFAS 164 Query: 216 SFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + LI+RDEA+H + + N + P I Sbjct: 165 IAYLRNHGGFNSVCRSNDLISRDEAIHTQASCCIFNNYLKDHEMPTDERIR 215 >UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepID=C8WQL9_ALIAD Length = 317 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 100/298 (33%), Gaps = 37/298 (12%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKY 80 Q + R + + +L K W P ++D ++D+ D+Q + E E+ + + Sbjct: 11 QTTSEKRLNHSILPM--RLYHKAKKLGTWDPRDIDFTKDKEDWQGMNEAERRVILRLCSL 68 Query: 81 QTLLDSIQGRSPNVALLPLISI--PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVF 138 + ++ + E E ++ T+ F E H+ + + + + S + Sbjct: 69 FVAGEEAVTLDLLPLIMAVAREGRLEEEMYLTTFLFEEAKHTEVFRRFLDEVAGETSDL- 127 Query: 139 DDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCL 198 + + +Y+ L + +G H + + + + Sbjct: 128 -------SVFHKDHYRKIFYEYLPQ------AMGRLVHDPSPEAQAEA----------SV 164 Query: 199 MSVNALEAIRFYVSFACSF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 +E + + + A + + G + IRL+ RDE+ H+ ++L+ L S Sbjct: 165 TYNMVVEGVLAETGYYAFYTALQKENKLPGLIQAIRLLQRDESRHIGYGTYLLSRLISEN 224 Query: 258 ------DDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI-GLNKDILCQY 308 + + + DL + +E + GLN D Y Sbjct: 225 AHIWDVVNRRINLLLPHAIGVVQDLNAELDTEEAQKLAEELGITDVPFGLNPDEFVAY 282 >UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC3_9VIRU Length = 400 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 82/250 (32%), Gaps = 34/250 (13%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE-KHIFISNLKYQTLLDSIQGRS 91 K+ L K S FW E D S DR ++ + E + I + + + DSI Sbjct: 55 KFKDTYDLWLKHQSCFWSVHENDPSVDRDRFETMTPKEFQEILLCTVGCIAIGDSIVLDR 114 Query: 92 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 L ++ EL+ E IH + Y++++ V++ R+ Sbjct: 115 IANGLKERVTSIELKAMFSDQEAREFIHKKMYSNMLD-------------VSHRANYYRS 161 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 E + Y ++E + + +G + + + + E I F Sbjct: 162 EEFKNEYMSVLETLADKYDIGY--------------------VQVQMFFIMMCEIILFTP 201 Query: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 F A + + L+ RDE +H + ++ D + E + Sbjct: 202 MFQTICYAACKGYCPKLCDLNLLVMRDEYIHYENARLQSFKFKTKLDRKFARTVLAEFSE 261 Query: 272 ECYDLFVQAA 281 LF + Sbjct: 262 LTLQLFAKII 271 >UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain n=3 Tax=Thermus RepID=Q745Z4_THET2 Length = 324 Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 102/330 (30%), Gaps = 35/330 (10%) Query: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSP 92 +Y + + +W E D D+ E E+ + L ++ + Sbjct: 14 EYPELLRFRDAIRHSYWVHTEFSFQSDLQDHALADEKERSLVERALLAIAQVELAV-KLF 72 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 + PE+ T+A SE H+ +Y H Sbjct: 73 WARVYDRFPKPEIAEVGLTFAESEVRHANAYAH-------------------------LL 107 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 + + + L + + ++L++ + E + + Sbjct: 108 ELLGLEEAFGQALEGASALRDRAQALGEALRRAQGKDLREYALALFLFSAFTEHVSLFSQ 167 Query: 213 FACSFAFAERE-LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 F A R +G + I +++E +H +L LLR+ + + E ++ Sbjct: 168 FYVLMALNRRGNRYKGISNAIEATSKEENVHGLFGVELLRLLRTEHPE----ALGEGFQE 223 Query: 272 ECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSN 331 E L + E+ D+LF G + ++++ N + GL PF Sbjct: 224 EALRLAQGLFRAEEALLDWLFSAGEPALVGHRETLEFLKGRYNQVLALHGLPPPFPVDEK 283 Query: 332 PI---PWINTWLVSDNVQVAPQEVEVSSYL 358 + W L++D +V +Y Sbjct: 284 ALRDTEWFTLELLADK-EVDFFNKRSVAYA 312 >UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n=2 Tax=Streptococcaceae RepID=A4VCA2_9LACT Length = 317 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 98/320 (30%), Gaps = 41/320 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++ + + + E+ S FW + + D ++ L E+ L T L Sbjct: 9 RAINWNIVEDEFDNAVWERATSLFWLDTRIPIENDFTNWIKLNLEEQGQLKCLLILLTNL 68 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN--DPSVVFDDIV 142 + Q + + + F E +++++Y I+ + F+ + Sbjct: 69 STNQSIEVGEIVRNGKCSQQEVAILNNIQFIEMVNTKAYNRILLTFDKEINLEKSFEWVD 128 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 + ++ + I++ Y E L Sbjct: 129 NDSRVLEYLNDINTVYRE-------------------------------SSLIKKRFIAL 157 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 +E + Y + F + ++ +I R+E+LH H + LL +D E+ Sbjct: 158 CVEGLLNYAYLSHLFELWINKEFNNLGTMLEMIIRNESLHCFYFSHKVKLLLKESDPKEV 217 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 E K Y+ + + D + +K I + N + +GL Sbjct: 218 ----ERFKAWSYETVNHFVKLGLNIIDDFYYLKE----SKKIAKNLILQEANNILMGIGL 269 Query: 323 DLPFQTRSNPIPWINTWLVS 342 F + IN L + Sbjct: 270 KEQFGFNDEVLKGINYRLNN 289 >UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus RepID=C3MUE4_SULIM Length = 308 Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 103/292 (35%), Gaps = 42/292 (14%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 KL + FW P +D+S+D D++ L + EK I+ + + ++ Sbjct: 29 KLYQLGKKLFWDPANIDLSKDAEDWKKLNDLEKMFIINVGSKFAAGEEAVALDLHPLIVT 88 Query: 99 LISIPELE--TWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISS 156 L+ +E ++E + + E+ H ++ FD + E + + +S Sbjct: 89 LVKEGRVEEVMYLEQFVYEESKHVEAF-----------RRFFDAVNVMEDLSTYTKDLSP 137 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 Y ++ + V + Y ++ A E Y F Sbjct: 138 NYKKIFYEELPKAMWNLSRDPSPENQVRAVVT------YNLIVEGVAAEGG--YNIFRQI 189 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 R+++ G AK++ LIA DE+ H+ +++ L +E + Y Sbjct: 190 TN--TRKILPGLAKMVNLIATDESRHIAFGIYLITRL------------VKEYGEGVYKA 235 Query: 277 FVQAAQQEKDWADYLFRDGSMI-------GLNKDILCQYVEYITNIRMQAVG 321 + +A +F + +M L L Y + + N R+ A+ Sbjct: 236 AMDHINYLAPYAIGIFSEPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAIN 287 >UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subunit, putative n=1 Tax=Babesia bovis RepID=A7AR36_BABBO Length = 329 Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 97/306 (31%), Gaps = 54/306 (17%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 +Q E + + YD + ++ + FW E+ + +R Y +LP + Sbjct: 17 EQHNETLLKENANRWVMFP-IHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELR 75 Query: 72 HIFISNLKYQTLLD-SIQGR--SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 + + + Y LD S R + + LL IPE + E IHS + + Sbjct: 76 QLVVKLISYHNRLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIMSS 135 Query: 129 NIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 I + + + E ++ + + + V L+ Sbjct: 136 AIPG--------TIDVPEADAKIEWLTR-----------------NLTSTSCFYIKVILQ 170 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 + K ++ + A + + + +A+D ++HL Sbjct: 171 CISKAIFRSAFGILAD-------------YLRNSKKLPTLLSALDTVAKDVSIHLKFAMA 217 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 L L+ ++ +L A E + + M GL++ L QY Sbjct: 218 ALEHLKLRP-----------TRETVMELLNSAYDLEMAYCRSVLPMDHM-GLSEYHLSQY 265 Query: 309 VEYITN 314 ++ N Sbjct: 266 IKNNVN 271 >UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae RepID=A5UUQ7_ROSS1 Length = 297 Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 92/291 (31%), Gaps = 41/291 (14%) Query: 23 PVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQT 82 R D +FEK + W P ++D S+D D+Q L E+ + + Sbjct: 9 TSRGLRRDTVPMRLFEKAKRLGV---WNPSDIDFSQDVRDWQTLTADERDLVLRLTSLFQ 65 Query: 83 LLDSIQGRSPNVALLPLISIP--ELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDD 140 + + + + E E ++ ++ + E H+ F+ Sbjct: 66 AGEEAVTLDLLPLVATIAAEGRIEEELFLTSFLWEEAKHTDF---------------FNR 110 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 +T ++ +L + + + + L Sbjct: 111 FLTE---------VTGVTGDLSHYHTSNYRALIHEALPAAMGRLRDDPSPEAQAIASLTY 161 Query: 201 VNALEAIRFYVSF-ACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 +E + + A R+LM G K I L+ +DE+ H+ ++L+ L + + Sbjct: 162 NMIVEGVLAETGYHAYFTMLERRDLMPGTRKGIGLLKQDESRHIAYGVYLLSRLINA--E 219 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI--GLNKDILCQY 308 P + ++ + + D F ++ GL+ D + Sbjct: 220 PRLWDV-------IVERMNELVVYAMGVIDDAFACYEVVPFGLSHDDFMHF 263 >UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L226_9VIRU Length = 371 Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 75/233 (32%), Gaps = 31/233 (13%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 KQ++ W PEE+ +S+D+ + PE K I L + D+I ++ + + Sbjct: 72 YNFWLKQVALAWSPEEISLSKDKATFHRAPEQLKKISACMLGMLAIGDNIVLQNLSD-VS 130 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 +I+ + + E HS Y+ + + + V+ K I++ Sbjct: 131 EIITNNYVLNAISRQEDVEKTHSDFYSRSLDVLNDVGKSVY---------YKSEHFINNE 181 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 ++ + S + L + E + F +F Sbjct: 182 LYDIQQ---------------------FSKKHSTNNLNKIAFFIMICERLYFLPAFVTVA 220 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 A R + RDE LH +++ + E I E + Sbjct: 221 YLGITGYAPHTALGNRYVMRDENLHYNLWRNISANFEYKMNKQEALNILNEFE 273 >UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theileria RepID=Q4UJ43_THEAN Length = 332 Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 128/373 (34%), Gaps = 51/373 (13%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + YT+ + +ND++ + + ++D F L ++ + FW E+ + D Sbjct: 6 LPYTSILKVQNDEI---LLKENHNRWVMFP-IEHDTFWILYKEVENNFWAAEDFIFTDDI 61 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQ---GRSPNVALLPLISIPELETWVETWAFSET 117 LP+ + ++ L + LD+ + LL + I E + E Sbjct: 62 KLLYQLPKPIFNTLLNLLSFHINLDNKLICRPVDITLDLLSEVQIAEARAFYGFQLTDEN 121 Query: 118 IHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 IH+ + + + +F+ + + +SSY G Sbjct: 122 IHTETISSMF--------QLFNQQLDTNIVSSNTLFLSSY--------------GMDKII 159 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF--AFAERELMEGNAKIIRLI 235 + K+ L L +M + FY S + +L+ I Sbjct: 160 WLYNECENNKCFFKRVLLLVIMK------LLFYCS-INILRDYLLKEKLLPTFITAFDSI 212 Query: 236 ARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG 295 D +H LL++ + + E ++ QA + E + + Sbjct: 213 TNDRIIHTRFAHCTFRLLQN-----------KMLESEVLEIIKQALKLEYQFI-LQYFTI 260 Query: 296 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 L+ +++ Y+E+I N + G + + + I W+N ++ N+Q +++ Sbjct: 261 QFFNLSTNVIKSYLEWIGNNILLVCGYKTLYTSEFD-IDWLNHPIIDLNIQKQTNKIQKH 319 Query: 356 SYLVGQIDSEVDT 368 + + I + D Sbjct: 320 NENLNDIKFDEDF 332 >UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=Cryptosporidium RepID=A3FPS5_CRYPV Length = 339 Score = 80.9 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 102/331 (30%), Gaps = 26/331 (7%) Query: 11 NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 Q E + P + KY L +K FW E + D+ + E Sbjct: 10 EQQKNESILLDNPFRWVLFP-IKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMDEKL 68 Query: 71 KHIFISNLKYQTLLDS--IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 + +D+ + LL + +PE + E I Y + Sbjct: 69 LDYIEMAFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENI----YKELFM 124 Query: 129 NIVNDPSVVFDDIVTNEQIQKR------AEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 N V + I ++++K+ ++ Y+ +E + G Sbjct: 125 NYVEMIRKNKEKIERTDEVEKKDENNLNSKISKEEYEYNLEKKLNELEDFTKMKELVGNF 184 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 +K +Y ++ +I +E EL + I RDE Sbjct: 185 YDEDTLFSEKLIYYVIIKKIFSSSIHLLRLSFSMRNISESELPTQLCDGLDRIRRDEQYQ 244 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 + + +++ + + +L QA EK++ + D ++ + + Sbjct: 245 VEFCLSIAKSMKTKPSN-----------DQVVNLLEQAIMLEKNFI-FSIVDPQVLQIER 292 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQTRSNPI 333 + + ++ + + + + F SNP Sbjct: 293 EDIVAFLLFNADEILVDLKYPRQFNV-SNPF 322 >UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Geobacillus kaustophilus RepID=Q5QL41_GEOKA Length = 292 Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 87/254 (34%), Gaps = 34/254 (13%) Query: 36 IFEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 + KL + + F W P+E+D+S D+ ++ L E + I + + + Sbjct: 31 LAWKLYQMAIRFGTWNPQEIDLSEDKKHFKQLDEQRRAYLIHFCTGFWNAE----ENVAL 86 Query: 95 ALLPLISIP---ELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRA 151 P I I E + ++ T E H+ + ++ V + ++ + +RA Sbjct: 87 KFCPWIMIAPSIEQQAFLSTQLVDEFKHTEFFIRYFAEVLQTDREVKVLNLVHDTLDERA 146 Query: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 + S D+ E L G + + + ++ EA+ Sbjct: 147 RQLLSVLDKGPEEREIAMLEGLVHYQGVIEGIQ------------AMVGYEVFEAVY--- 191 Query: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 + L G + + I RDE H+ M+ L +P A+ +E + Sbjct: 192 --------GQYGLFPGLKEGFKQIKRDEGRHVGYGLRMMKYLSK---NPSYAKRIKELFE 240 Query: 272 ECYDLFVQAAQQEK 285 E + QE Sbjct: 241 EFLPKILVRYDQEI 254 >UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomycetales RepID=RIR2H_MYCTA Length = 314 Score = 77.4 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 100/290 (34%), Gaps = 43/290 (14%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 KL + FW P ++D +RDR D++ L + E+ + + Sbjct: 22 KLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQP-FMS 80 Query: 99 LISI---PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGIS 155 + E ++ +AF E H++ VF + A GIS Sbjct: 81 AMRAEGRLADEMYLTQFAFEEAKHTQ---------------VFRMWLD-------AVGIS 118 Query: 156 SYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 ++ + + ++ + + + + +E + + Sbjct: 119 EDLHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQ-VRASVTYNHIVEGMLALTGY-- 175 Query: 216 SFAFAE----RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 +A+ + R ++ G +++R I DE H+ R A D + E Sbjct: 176 -YAWHKICVERAILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDANWTVFETRMN 232 Query: 272 ECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 E L ++ E+ +A L+ D L+KD +++Y T+ M+ G Sbjct: 233 ELIPLALRLI--EEGFA--LYGDQPPFDLSKDD---FLQYSTDKGMRRFG 275 >UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=C7J3K0_ORYSJ Length = 162 Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +N D++ QY+E++ + + A+G + +NP W+ L+S + E V Y Sbjct: 83 MNGDLMSQYIEFVADRLLMALGCKKMYNV-ANPFDWME--LISLQGKTNFFEKRVGDYQK 139 Query: 360 GQIDSEVD 367 + S ++ Sbjct: 140 ASVMSSLN 147 >UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K5J6_9ALVE Length = 157 Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 45/95 (47%), Gaps = 4/95 (4%) Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 ++ + K E + + A E+++ G +IG+N +++ +Y+E++ + + A+ Sbjct: 19 DLRDWETLTKNEQHFIKNSAVNVEREFITDALPVG-LIGMNAELMGRYIEFVADRLLVAL 77 Query: 321 GLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 G + + +NP W+ ++S + E V Sbjct: 78 GYAKIYNS-ANPFDWMT--MISLQGKTNFFEKRVG 109 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 22/36 (61%) Query: 41 IEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFIS 76 ++ + FW EE+D+ +D D++ L ++E+H + Sbjct: 1 YKQHEASFWTAEEIDLGQDLRDWETLTKNEQHFIKN 36 >UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomycetales RepID=RIR2H_RHOSR Length = 324 Score = 73.9 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 102/320 (31%), Gaps = 36/320 (11%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 +L K + FW P ++D SRD D++ L ++ + + + Sbjct: 33 RLFTKGNAKFWNPTDLDFSRDAEDWEGLNSEQQRNSTYLVAQFIAGEEAVTEDIQPFMKA 92 Query: 99 LISIPEL--ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISS 156 + + E ++ + F E H++ + + + + + + + Sbjct: 93 MAAEGRFGDEMYLTQFCFEEAKHTQVFRLWMDAVGLTRDL-------HPFVAENPYYRQL 145 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 +Y+EL + V + E L L A + + Sbjct: 146 FYEELPGSLKVLETDPSPVNQVRASVTYNHVIEGS----LALTGYYAWQKVC-------- 193 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 R ++ G +++R I DE H+ R A D + +E E L Sbjct: 194 ---TTRGILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDSNWGVVQERMAELMPL 248 Query: 277 FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWI 336 + W + F + GL+ +++ Y + + +G R P+ I Sbjct: 249 ALGMID----WVNKQF-EVQPYGLDDQ---EFIAYAADRAQRRLG--AIESARGRPVEEI 298 Query: 337 NTWLVSDNVQVAPQEVEVSS 356 + + ++ E + + Sbjct: 299 DLDYSPEALEEKFGEEDAKA 318 >UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae RepID=C9RTF8_GEOSY Length = 302 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 94/308 (30%), Gaps = 48/308 (15%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++ Y ++EK W P ++D S+D+ D+ L EK + + + Sbjct: 12 GTIDWEHPMYKLYEKAKRNGK---WNPADIDFSQDKEDFARLTSEEKIAALPLVAGFSAG 68 Query: 85 DSIQGRSPNVALLPLISIPELE--TWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV 142 + L LE ++ T+ E H ++ Sbjct: 69 EEAVTLDILPMAHALARQGRLEDVMFLTTFMHDEAKHVEMFS-----------------R 111 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 +++ A +S ++++ + Y L + +R + Sbjct: 112 WQQEVGIGAMDLSVFHNDHYKRIFYEALPEAMNRLYTDDSPEAVIR-------AATVYNM 164 Query: 203 ALEAIRFYVSFACS-FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 +E + + + L G + I + DE H+ + + L + + Sbjct: 165 IVEGTLAESGYYTFRQIYKKAGLFPGLLQGIDYLNMDEGRHIQFGLYTIQRLVNENER-- 222 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSM---------IGLNKDILCQYVEYI 312 + Q +L+ + YL G + ++ D+L YV Sbjct: 223 ---YYDLFIQYMDELWPHVV----GYVAYLTELGKRQQQLARTYALEIDYDMLNNYVVKQ 275 Query: 313 TNIRMQAV 320 NIR + + Sbjct: 276 FNIRKKQI 283 >UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S8_SULAC Length = 330 Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 82/245 (33%), Gaps = 33/245 (13%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV--AL 96 +L E F W E+D S+DR D++ L ++ Y + R Sbjct: 35 RLFEIGEKFRWTAYELDFSKDREDWKKLKPSDRTQNKIISSYFLAGEECVARDILPLANA 94 Query: 97 LPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISS 156 + + + E ++ +A E H+ ++ ++ + Sbjct: 95 MEELGLIEEALYLTQFARDEANHTVAFRKWFESVGETEGI-------------------- 134 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL-EAIRFYVSFAC 215 YD + Y L E T + + + ++S N + E I + Sbjct: 135 -YDFTYKNEPYRRLFYEIIPTDMRRLYN---DPSPENIVRAVVSYNFVAEGILAETGYYG 190 Query: 216 SFAFAEREL----MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 E + G K+++LI RDEA H++ ++ L+ S D + E Q Sbjct: 191 --YVKGYEKILPALPGLYKMVKLITRDEARHISFGAYVAALMISMHGDSVLNEFNRYFGQ 248 Query: 272 ECYDL 276 ++ Sbjct: 249 LTQEI 253 >UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Lactobacillus fermentum RepID=B2GEC7_LACF3 Length = 306 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 47/110 (42%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 +D+Q+ + + K + FW V ++ D+ + AL ++ L + LL + Sbjct: 9 INWDEQEDQVDQATWLKLTNNFWLDTRVPITDDQPSWHALTAQQQAQVGHALAGRALLSA 68 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 Q +L + E + F E++H+++ T I R + ++ + Sbjct: 69 FQSELGAPSLRAGRRTQQEEAVLNLITFMESVHTKAVTTIFRRLTDEETT 118 >UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TH71_TETNG Length = 441 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 3/69 (4%) Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQIQK 149 + + E + E IHS Y+ +I + +PS +F+ I T ++K Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKK 293 Query: 150 RAEGISSYY 158 +A+ ++ Sbjct: 294 KADWALNWI 302 >UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like protein n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZF52_NATMA Length = 309 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 99/302 (32%), Gaps = 35/302 (11%) Query: 38 EKLIEKQL-SFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 +L K W P++ D+++DR D++ E E+H F++ + R+ + Sbjct: 12 YELYRKGKREGTWDPDDYDLTQDREDWEQFSEAEQHRFLATCSGFYDGEEDVTRTLAPYM 71 Query: 97 LPL---------ISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + L + E ++ + E H+ ++ + + ++ Sbjct: 72 MALDALPNDELPFDTVQEEMYLAQQVYEEAKHTDLFSRYFEEVFGTQNTAPYREGGYQEQ 131 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + D+L+ + + + E + L +E Sbjct: 132 GYSTDDLYDTADDLLAAVNSGDRTELVYSLGEAYLNYMGIVEAQLARGGYLSFDQMIE-- 189 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + ++E + I + +DE H+ + ++ L A Sbjct: 190 ------LKATQMGRDSVLESFQQAIGKVRQDETRHIENGRWVMKQL---------AIAEP 234 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD----ILCQY----VEYITNIRMQA 319 + + Y+ ++ + + +D L+ D G + D L QY ++YI R Sbjct: 235 DIVADVYEPRMEEYVENRLLSDPLYDDQPFEGYDPDRIGHQLVQYLQDTIDYIGAERFDQ 294 Query: 320 VG 321 G Sbjct: 295 YG 296 >UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomycetales RepID=RIR2H_MYCA1 Length = 311 Score = 67.8 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 96/293 (32%), Gaps = 50/293 (17%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 KL + FW P ++D SRDR D++ L + E+ + + + Sbjct: 22 KLFAGGNAKFWNPADIDFSRDRADWERLTDDERSYATRLCAEFIAGEESVTQDIQP-FMA 80 Query: 99 LISIPELE----TWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGI 154 + E ++ +AF E H + VF + A G+ Sbjct: 81 AMRA-EGRLGDEMYLTQFAFEEAKHVQ---------------VFRMWLD-------AVGV 117 Query: 155 SSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFA 214 + ++ + + +T+ + + + + +E + A Sbjct: 118 TDDLHHFLDDVPSYRTIFYEELPDCLNALTIDPSPAAQ-VRASVTYNHMVEGML-----A 171 Query: 215 CSFAFA------ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 + F ER ++ G +++R I DE H+ R A D + E Sbjct: 172 LTGYFGWHKICVERGILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDANWGVFET 229 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 E L ++ E+ +A Y + + +++ Y ++ M+ G Sbjct: 230 RMNELMPLGLRLI--EEGFALYDPMPFDL------SVDEFMAYASDKGMRRFG 274 >UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S5_SULAC Length = 345 Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 31/232 (13%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVD--VSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++ Y + +L K FW P + + +D+ D++ + E E+ I + Sbjct: 25 IDWNS--YPM--RLWAKSNELFWSPLQFKELIQQDKQDWETMSESEREISEYIATAFSAG 80 Query: 85 DSIQGRSPNVALL--PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV 142 + R ++ + E ++ + ET H+ ++ + +I D + Sbjct: 81 EEAVSRYLAELVIALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDSIGMDKDT--EKWT 138 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 T I + Y G S + + + S+ Sbjct: 139 TE-----------------INPSYYELFYVALPSAAYGVKANPSPESILRFTATYMFSI- 180 Query: 203 ALEAIRFYVSFACSFAFAEREL-MEGNAKIIRLIARDEALHLTGTQHMLNLL 253 E I F ER ++G +I++ +A DE+ HL ++ +L Sbjct: 181 --EGIAAETGFYFWRTMWERGRHLKGIYEIVKRVAADESRHLAFGTYLTTML 230 >UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS Length = 369 Score = 64.7 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 31/256 (12%), Positives = 79/256 (30%), Gaps = 31/256 (12%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 + + +W E + D + L + + + + D + + L Sbjct: 47 WHYYQLHQANYWSATEHEPLEDVSGFIKLDSQWQKAVLHSFAILAIGDDAVMQFIDENDL 106 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 + + ETIH +V++ ++ A+ S + Sbjct: 107 EWEECTQW--MFKDQGARETIH---------------KIVYN------KMLHLADHSSEF 143 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 ++ Y + + + + + +KK L+ + E F F Sbjct: 144 TTSMLTSKKYINYILHNNSDLKLQKYKLEDEVMKK--AAFLIKMIFCERYLFATPFLVIN 201 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD-----DPEMAEIAEECKQE 272 E + +I + +DE +H + L+ +D + ++A+E + Sbjct: 202 LMGESGFLNNCVRINMQVMKDEHVHYLHAVQLFRDLKPKSDQIDEINKLFFDMAQEFVEI 261 Query: 273 CYDLFVQA-AQQEKDW 287 ++ ++ A E + Sbjct: 262 VENMIMKIGAGLESKY 277 >UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0R0_9EURY Length = 296 Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 91/285 (31%), Gaps = 22/285 (7%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 ++L+ + + W P +DV D+ L E L + L Sbjct: 28 KRLVRSAIEYHWDPAAIDVRADQEAVSELSRVEFTRLRGLLAQFGAGERAVTTDLAP-LA 86 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ + + ++ T + E H+ + + ++ I T + R Sbjct: 87 VVLDGSDEQRYIATQLYDEARHTELFDRYWKRVIRPEEESRGLIPTEP-MADR--WSHDD 143 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 Y EL + TS T + L + L + +E Y Sbjct: 144 YRELFDRTSNAMARLLERDTSETRARAFCHYHLTVEGILAQTAYRWVETR--YSG----- 196 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 + G R + RDE H++ + L DPE + Sbjct: 197 ELEAVPELPGLVNGFRYLRRDEGRHVSFGVTKVRKLVDKGVDPET----------IVETI 246 Query: 278 VQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + + D + RDGS+ G +++ + ++ + R++ VG+ Sbjct: 247 DELVPLVETTIDQMVRDGSI-GADRNGILNRIDTARDRRLEQVGV 290 >UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C317CA Length = 306 Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 90/289 (31%), Gaps = 29/289 (10%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 +L W +++D ++D++D+ + E E+ + L + + L+ Sbjct: 38 ELYSLWERQHWAVQDLDFTQDKLDWHERFDEEERFARMYGLSAFFIGEQRVAAELGP-LM 96 Query: 98 PLISIPELETWVETWAFSETIHS----RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEG 153 ++ ++ T E H R Y+ + D++ E ++++ Sbjct: 97 RAAPQEDMRLFLCTQIADEARHVAFFDRFYSEV-------------DVLGVEGLEEKLAA 143 Query: 154 ISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSF 213 S + + + L +L E ++ + + AL F Sbjct: 144 TSEHLNPEFGVLFDEMLKSRVDRLATEPEDLETLVEAITIYHMVIEGMLALTGQHF---- 199 Query: 214 ACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQEC 273 + G + +ARDE H+ L + DP + E Sbjct: 200 -IIDYNEREGTLPGFVEGFINVARDEHRHVAFGARFLRDMAR--SDPRHVAAIQRTLGEI 256 Query: 274 YDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + + WA D + G++ + RM+ +GL Sbjct: 257 APVAEGVLKP--KWAPDD-DDFEIFGISVTETRAFAFRALERRMKVIGL 302 >UniRef50_D2S309 Ribonucleotide reductase beta subunit-like protein n=3 Tax=Halobacteriaceae RepID=D2S309_9EURY Length = 302 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 90/286 (31%), Gaps = 26/286 (9%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 + + W P E+D+ DR LP+ +L + L Sbjct: 21 RYYRNAVEKHWDPHEIDLEADREGATDLPDPAFEGLKQSLALFGAGEESVTEDLAP-LAV 79 Query: 99 LISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYY 158 ++ E + ++ T + E+ H+ + R +++ +++ +K + Y Sbjct: 80 VLEDIEDQLFITTQLYEESKHTDFFDRYWREVIHAEEERRGQELSSPADEK---WFNEPY 136 Query: 159 DELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFA 218 DEL E + T + L + L L + A Sbjct: 137 DELFERNERAMVQLLEEDTPKNRAKAHCHYHLTIEGILAQTGYYGL-----------TLA 185 Query: 219 FAERE----LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECY 274 + E+E + G + ++L+ DE H+ L L + ++ + E Sbjct: 186 YGEQEPDLPDLPGLVEGLKLVRSDEGRHVGFGMAQLKSLVIDGE--VDPDVLRDTVDELV 243 Query: 275 DLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 L + E +G G + L +Y RM+ + Sbjct: 244 PLVQDSLAGE---GGASTEEGP--GPSPSDLAEYAYTKHEQRMRQI 284 >UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WK83_ACTMD Length = 320 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 94/303 (31%), Gaps = 31/303 (10%) Query: 30 DQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQ 88 D +K + L ++ + W ++D S+D +D++ + + E+ F + Sbjct: 35 DLKKLPEYIDLYKRYFTHRWNAYDLDFSQDAVDWRTKMTDVERKAFTEIAAAFHHAERQV 94 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + + L E + ++ T E H+ + R +V P Sbjct: 95 --EVELPIFMLTGSEEAKMYLCTQLEDEARHTLFFDRFYREVVGLPG------------- 139 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 + + + G + + V K++ +E + Sbjct: 140 ---DSVEELLASSFPHVPETFVGAFGLLSYLADDLRVDPENPAKRVRYATAYFMWIEGVL 196 Query: 209 FYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + + + G RDEA H+ L S +DP + Sbjct: 197 ALTIMKLTLTYCRTKGYLPGYYTGFIASCRDEARHVQFGMRFLRD--SVQEDPRLLH--- 251 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 E ++ + + + +G +++ + ++ N ++ VG+ LP Sbjct: 252 ----EIHETLRT--ELAMNGGASVPAPLEPLGFSEEEVVHFMIRQVNNKLSDVGISLPPD 305 Query: 328 TRS 330 + Sbjct: 306 IQE 308 >UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXC9_CATAD Length = 353 Score = 57.4 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 66/210 (31%), Gaps = 23/210 (10%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 L + S W +D++RDR + L + +S L + +S R+ + AL Sbjct: 50 DLYNRWESRQWSVAGLDLARDRRRFAELRPFARREILSALAELEIGESCVTRTLS-ALAD 108 Query: 99 LISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYY 158 ++ T E H R + + ++ A + Sbjct: 109 HAPDEADRLYLCTQMADEARHVRFFQSYLSDV--------------------AGIAAEQL 148 Query: 159 DELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL--EAIRFYVSFACS 216 + M + T V R ++++ + L E + Sbjct: 149 EPHGAMGGESGFGVVYDPLLTRHTAAVRTRPDDRRVWHVAVVSYHLLAEGLLAVAGLRAL 208 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGT 246 A A+ + ++ + + RDEA H+T Sbjct: 209 RALAKSCELTALSEGLANVVRDEARHVTFG 238 >UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318F2 Length = 419 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 74/243 (30%), Gaps = 30/243 (12%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 +E L + WR E+D + D + + E+ + N + + Sbjct: 12 YEDLYARWERGNWRATEIDFTADSEQWQERFDAFERRAALWNYSLFFHGEDAVADN---- 67 Query: 96 LLPLISIP---ELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L P I E + ++ T E H+ V F + ++ + Sbjct: 68 LSPYIDAAPLEEQKYFLTTQQVDEARHA---------------VFFKRFMH--EVCDVGD 110 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 G + I+ W R K + +EA Sbjct: 111 GTMAGGLAAIQPDLTWGFRRVFDRLDTMADELRRDRSKPKLAAALALYHLIVEATLAQSG 170 Query: 213 --FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 F + +R+++ G +R + DE H+ +L L+ +DPE E E Sbjct: 171 QHFITGY-LEQRDVLPGFYGGMRNVEFDEQRHIGFGVKLLYDLQR--EDPECKEAVAELL 227 Query: 271 QEC 273 +E Sbjct: 228 REV 230 >UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42088_ARATH Length = 83 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 13 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 + +EP+ Q + +Y ++ +K + FW EEVD+S D ++AL + E Sbjct: 5 ESEEPLLMAQNQRFTMFP-IRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSE 61 >UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=5 Tax=rosids RepID=D1II58_VITVI Length = 301 Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%) Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 + +F F +R LM G LI+RDE LH + Sbjct: 6 LFLVFNFCDIFW-KKRGLMPGLTFSNELISRDEGLHCDFACLLYK 49 >UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD87 Length = 104 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 44/105 (41%), Gaps = 7/105 (6%) Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 + +++ Y + + E ++ + ++R+ + + + +++Y N ++ +G + Sbjct: 3 KKMLEEKMYSILYSLMENEIEYTNVIYRESGL----EKEVVNFLKYNANRALENLGFEKL 58 Query: 326 FQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 + + NPI + L ++ + + Y G + D D Sbjct: 59 YTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQKGVYEELEDED 101 >UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus RepID=Q91ES7_GVCP Length = 362 Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 31/249 (12%), Positives = 64/249 (25%), Gaps = 27/249 (10%) Query: 34 YDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPN 93 Y + + W E D + + ++ + + + D + Sbjct: 43 YTPSWNYLVEHQINHWYANEHKPMDDLNGFDKIDSAWQNALLQSFAVLAIGDDKVMDLIS 102 Query: 94 VALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEG 153 + + + A ET H Y ++ Sbjct: 103 NSDIEWEESTKW--MFADQAARETTHKIVYNRMLELAC---------------------- 138 Query: 154 ISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSF 213 +S Y + + ++ + K L+L M + E F F Sbjct: 139 VSRSYTVNTLTSGDFSHYIMDCRVLDEFQLPERNEVNDKVLFLSTMILC--ERYLFAAPF 196 Query: 214 ACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA-DDPEMAEIAEECKQE 272 E + KI + +DE +H +L L+ G ++ E+ E+ Sbjct: 197 LIINLMGESGFINKCVKINMQVMKDEHVHYKHAVQLLMDLKRGVTNEVEINELFRGLSGA 256 Query: 273 CYDLFVQAA 281 L Sbjct: 257 FMVLVESMV 265 >UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1II57_VITVI Length = 75 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 +N ++ QY++++ + + A+G + + NP W+ Sbjct: 1 MNATLMSQYIKFVADHLLVAIGYERKYNVE-NPFDWME 37 >UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, beta subunit 2 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IMN4_NATPD Length = 306 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 83/278 (29%), Gaps = 28/278 (10%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK------HIFISNLKYQTLLDSIQGRSP 92 + + W P ++++ DR + +A + S + + Sbjct: 19 RYYRNAVERHWDPHDIELDTDRENLKAFLDSTDTPETYLDGLRSGVARFGAGEQAVTEDL 78 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L SI + + +V T + E H+ + R +++ D + + Sbjct: 79 APLATALGSIDD-QMFVTTQIYEEAKHTDFFDRYWREVIHPVE---DALGLDPSSPTDET 134 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 + Y+EL + T L + L ++ + Y + Sbjct: 135 WFNDAYEELFDRNEEAMERLLAAPTAEQFAKAYCHYHLVIEGILAQTGYYGMQ--QSYSA 192 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR-SGADDPE-MAEIAEECK 270 + E + G I +DE H+ L L G DP+ + +I E Sbjct: 193 DSYP----ELPHLPGLCDGFTKIRQDEGRHVGFGMAKLKALVGDGKVDPQLLDDIVGELL 248 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 D+ D F D +G+ + L + Sbjct: 249 PLVDDITTDV-------GDESFDD---VGIPPEELEAF 276 >UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, beta subunit 3 n=2 Tax=Halobacteriaceae RepID=Q3INJ5_NATPD Length = 316 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 91/291 (31%), Gaps = 26/291 (8%) Query: 36 IFEKLIEKQLSFFWRP-EEVD---VSRDRI---DYQALPEHEKHIFISNLKYQTLLDSIQ 88 + + + W P E+++ + +DR D E E + L + Sbjct: 18 VAGGYFKHAVYNHWDPYEDIEKALIEQDRKRLIDADEFGETEFEDLMRTLALFGAGEEAV 77 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 L+ ++ + +V + + E H++ + R +++ + + Sbjct: 78 TEDLAP-LMLVVDDINDQMFVSSQIYEEAKHTQFFDRYWREVIHP-------VADARGFE 129 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 +RA ++ + G+ + +L + SV A Sbjct: 130 RRAPTDQRFFVDGYVDLFDRTEAAMERLLEPGEDTPTNRVRAYCHYHLTVESVLAQTGYW 189 Query: 209 FYVSFACSF---AFAEREL--MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 VS A E + +EG K I I DE H+ + A+D Sbjct: 190 GIVSSMSPRGSEALREDGMPHLEGLVKGISFIRSDEGRHVGFGMQKVQ--SHLAEDGVDE 247 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 + E QE L + D + ++ + L + +E IT+ Sbjct: 248 SVVRETLQELLPLVAETVSA----TDEVTDPEPLVEYASEKLTRRIEVITD 294 >UniRef50_A4CGF1 2-oxoglutarate dehydrogenase, E1 component n=27 Tax=cellular organisms RepID=A4CGF1_9FLAO Length = 940 Score = 44.3 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Query: 283 QEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVS 342 E+ + +F G +IG+ L + ++++T I A+G++ + + WI WL Sbjct: 117 LEESDLEKVFSAGDIIGIGPSTLREIIDHLTRIYCDAIGVEYMYIRSPERVEWIQQWLNV 176 Query: 343 DNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 ++ Y++ +++ V + Sbjct: 177 NDNHPNFSPERKK-YILRKLNEAVSFEGF 204 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit b... 356 6e-97 UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit bet... 345 2e-93 UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subun... 340 6e-92 UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit bet... 326 1e-87 UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 ... 320 6e-86 UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 ... 305 1e-81 UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornu... 300 6e-80 UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain ... 293 9e-78 UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative... 290 4e-77 UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain... 286 9e-76 UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit bet... 286 9e-76 UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepI... 284 3e-75 UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprino... 283 5e-75 UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit bet... 283 5e-75 UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit bet... 281 3e-74 UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclass... 280 5e-74 UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 280 7e-74 UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subun... 275 2e-72 UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit bet... 275 2e-72 UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subuni... 272 1e-71 UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subun... 271 3e-71 UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=S... 270 4e-71 UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=roo... 270 5e-71 UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=r... 265 2e-69 UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 T... 264 3e-69 UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Ver... 263 8e-69 UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=... 261 3e-68 UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subun... 261 4e-68 UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subun... 261 4e-68 UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit bet... 260 4e-68 UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Pr... 259 1e-67 UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subuni... 258 3e-67 UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Ba... 257 6e-67 UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 257 6e-67 UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 256 7e-67 UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_S... 255 3e-66 UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 255 3e-66 UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 T... 254 3e-66 UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=... 253 8e-66 UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain ... 251 3e-65 UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain... 249 1e-64 UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain... 246 1e-63 UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase be... 245 1e-63 UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Ba... 245 3e-63 UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase sm... 242 2e-62 UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subuni... 241 2e-62 UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=ce... 241 3e-62 UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subuni... 241 3e-62 UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=A... 241 4e-62 UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subuni... 240 5e-62 UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD 239 1e-61 UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate redu... 239 1e-61 UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subuni... 238 3e-61 UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subun... 236 8e-61 UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain ... 236 1e-60 UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain... 231 4e-59 UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subu... 228 2e-58 UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain... 226 8e-58 UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase sm... 225 2e-57 UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit bet... 224 3e-57 UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diph... 223 6e-57 UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chai... 223 7e-57 UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta sub... 223 9e-57 UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subun... 223 1e-56 UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit bet... 221 2e-56 UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib be... 221 2e-56 UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystiviru... 221 4e-56 UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subu... 219 1e-55 UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosph... 219 1e-55 UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain ... 219 1e-55 UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit bet... 217 5e-55 UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 217 6e-55 UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subun... 216 8e-55 UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 216 1e-54 UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta sub... 216 1e-54 UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Dei... 210 7e-53 UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subuni... 209 2e-52 UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Ba... 203 1e-50 UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7... 201 3e-50 UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit bet... 201 3e-50 UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subun... 199 1e-49 UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderw... 194 4e-48 UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain ... 191 2e-47 UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 ... 187 6e-46 UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome s... 186 9e-46 UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), ... 185 3e-45 UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderw... 182 2e-44 UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_... 181 5e-44 UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclass... 179 2e-43 UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain... 178 4e-43 UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 T... 177 7e-43 UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseud... 175 2e-42 UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium ... 173 1e-41 UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Mar... 172 2e-41 UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Envi... 171 5e-41 UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain... 170 7e-41 UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subun... 168 3e-40 UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida... 166 1e-39 UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain... 163 8e-39 UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepI... 163 1e-38 UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain ... 159 2e-37 UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib be... 158 3e-37 UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, s... 156 2e-36 UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative ... 152 2e-35 UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain ... 145 2e-33 UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=C... 143 9e-33 UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepI... 142 1e-32 UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Bru... 142 2e-32 UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomy... 142 3e-32 UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena t... 139 1e-31 UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theil... 139 2e-31 UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomyc... 137 4e-31 UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae... 137 5e-31 UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Coryne... 136 1e-30 UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subuni... 134 4e-30 UniRef50_D2S309 Ribonucleotide reductase beta subunit-like prote... 134 6e-30 UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomy... 133 9e-30 UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC... 131 4e-29 UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n... 131 5e-29 UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyos... 127 6e-28 UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH 127 7e-28 UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus Rep... 124 4e-27 UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexiba... 124 4e-27 UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema m... 124 7e-27 UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment... 123 1e-26 UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes a... 118 3e-25 UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS 118 4e-25 UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae Rep... 117 5e-25 UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=M... 117 6e-25 UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like prote... 114 5e-24 UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, b... 114 5e-24 UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Ge... 112 2e-23 UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=G... 107 8e-22 UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Su... 106 2e-21 UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus... 105 3e-21 UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolo... 104 7e-21 UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenul... 102 2e-20 UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Con... 101 5e-20 UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subuni... 88 5e-16 UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sa... 86 2e-15 UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain... 84 9e-15 UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome s... 81 6e-14 UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 T... 70 1e-10 UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment... 65 5e-09 UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, s... 57 1e-06 UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, s... 48 5e-04 Sequences not found previously or not previously below threshold: UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, b... 92 2e-17 UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia... 52 3e-05 UniRef50_B2H6U3 Conserved protein n=8 Tax=Bacteria RepID=B2H6U3_... 49 2e-04 UniRef50_UPI0001AF6C58 hypothetical protein MkanA1_14310 n=1 Tax... 47 0.001 UniRef50_C1V565 Putative uncharacterized protein n=1 Tax=Halogeo... 47 0.001 UniRef50_A4X8S2 Putative uncharacterized protein n=1 Tax=Salinis... 47 0.002 UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacter... 45 0.004 UniRef50_Q47J53 Putative uncharacterized protein n=3 Tax=Proteob... 44 0.008 UniRef50_Q4J6K5 Conserved protein n=13 Tax=Sulfolobaceae RepID=Q... 44 0.008 UniRef50_B2HNZ6 Putative uncharacterized protein n=7 Tax=Bacteri... 42 0.026 UniRef50_A4CGF1 2-oxoglutarate dehydrogenase, E1 component n=27 ... 42 0.026 UniRef50_A6GD89 Putative uncharacterized protein n=1 Tax=Plesioc... 42 0.031 >UniRef50_P69925 Ribonucleoside-diphosphate reductase 1 subunit beta n=294 Tax=root RepID=RIR2_ECO57 Length = 376 Score = 356 bits (914), Expect = 6e-97, Method: Composition-based stats. Identities = 376/376 (100%), Positives = 376/376 (100%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR Sbjct: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS Sbjct: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG Sbjct: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA Sbjct: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL Sbjct: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDSEVDTDDLSNFQL Sbjct: 361 QIDSEVDTDDLSNFQL 376 >UniRef50_P43755 Ribonucleoside-diphosphate reductase subunit beta n=58 Tax=root RepID=RIR2_HAEIN Length = 376 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 321/376 (85%), Positives = 346/376 (92%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 MAYTTFSQ KNDQLKEPMFFGQ VNVARYDQQKY+ FEKLIEKQLSFFWRPEEVDVS+DR Sbjct: 1 MAYTTFSQNKNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDR 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 IDY ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPL+SIPELETW+ETW FSETIHS Sbjct: 61 IDYAALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNIVNDPS+VFDDIVTNE+I KRA+ ISSYYD+LI + + L GEGT+TV+G Sbjct: 121 RSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYGLYGEGTYTVDG 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K V+LR LKK+LYLCLMSVNALEAIRFYVSFACSFAFAER LMEGNAKII+ IARDEA Sbjct: 181 KECVVTLRSLKKQLYLCLMSVNALEAIRFYVSFACSFAFAERRLMEGNAKIIKFIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLTGTQH+LN++ +G DDPEMAEIAEECKQE YDLFV AA+QEK WADYLF+DGSMIGL Sbjct: 241 LHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGSMIGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N+DIL QYVEYITNIRMQAVGL LPFQTRSNPIPWIN WLVSDNVQVAPQEVEVSSYLVG Sbjct: 301 NRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSSYLVG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QIDS+VDT+D +F L Sbjct: 361 QIDSKVDTNDFDDFSL 376 >UniRef50_A8IKH1 Ribonucleoside-diphosphate reductase small subunit n=2 Tax=Eukaryota RepID=A8IKH1_CHLRE Length = 493 Score = 340 bits (871), Expect = 6e-92, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 134/363 (36%), Gaps = 49/363 (13%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHI 73 L E + P + KY + ++ ++ FW EEVD + D ID+ L E+ Sbjct: 165 LDEDLLRENPNRFTLFP-IKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRF 223 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 L + D I + + I +PE + E +HS Y+ ++ + V + Sbjct: 224 IKYVLAFFAASDGIVMENLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVRE 283 Query: 134 PSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 P +FD I T + K+AE + Sbjct: 284 PEERNQLFDAIHTIPTVAKKAEWAMRWISS------------------------------ 313 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 L+ +E I F SF F +R LM G + LI+RDE LH + Sbjct: 314 SNVFAERLVGFACVEGIHFSGSFCSIFWLKKRCLMPGLSFSNVLISRDEGLHCDFACCLY 373 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + L++ ++ + +A Q E ++ ++G+N D++ QY+ Sbjct: 374 SHLKNRLS-----------RERVLQIVDEAVQLEDEFCTEALS-CELLGMNADLMRQYIR 421 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 ++ + + ++G + + TR NP W+ ++S + E V Y + + + Sbjct: 422 FVADRLLVSLGYEKHYNTR-NPFDWME--MISLQGKANFFERRVGEYQRAGVMGGNNGNS 478 Query: 371 LSN 373 + Sbjct: 479 ARD 481 >UniRef50_Q89AS5 Ribonucleoside-diphosphate reductase subunit beta n=48 Tax=root RepID=RIR2_BUCBP Length = 376 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 275/376 (73%), Positives = 333/376 (88%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M YTTFS+ KN+QL EPMFFGQ VN++RYDQQKY+IFEKLIEKQLSFFWRPEEVD+SRD Sbjct: 1 MTYTTFSKNKNNQLYEPMFFGQSVNISRYDQQKYEIFEKLIEKQLSFFWRPEEVDLSRDY 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 ID+Q LP+HEKHIF+SNLKYQTLLDSIQGRSPN+ALLP++S+PELETW+ETW+FSETIHS Sbjct: 61 IDFQNLPQHEKHIFVSNLKYQTLLDSIQGRSPNIALLPIVSLPELETWIETWSFSETIHS 120 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 RSYTHIIRNI+N PS++FDDI+ N+ I RA+ I+ YYD+LIE+TSYWHL GEG HT+NG Sbjct: 121 RSYTHIIRNIINTPSLIFDDIIDNKNIANRAKDIAKYYDDLIELTSYWHLFGEGKHTING 180 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 K + + L ELKKKLYLCL+SVNALEAIRFYVSFACSFAFAERE MEGNAKIIRLIARDEA Sbjct: 181 KKIKIDLHELKKKLYLCLISVNALEAIRFYVSFACSFAFAEREKMEGNAKIIRLIARDEA 240 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LHLT TQH+LN+L + ++ M++I++EC +ECY LF++ + QEK WA YLF++GSM+GL Sbjct: 241 LHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGSMLGL 300 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 N++IL QY+EYITNIRM+A+GL PF+ SNPIPWIN+WL+SDNVQVAPQE+ VSSYL+G Sbjct: 301 NQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWINSWLISDNVQVAPQEISVSSYLIG 360 Query: 361 QIDSEVDTDDLSNFQL 376 QI+SE++ D F+L Sbjct: 361 QINSEINDSDFEKFKL 376 >UniRef50_P31350 Ribonucleoside-diphosphate reductase subunit M2 n=93 Tax=root RepID=RIR2_HUMAN Length = 389 Score = 320 bits (819), Expect = 6e-86, Method: Composition-based stats. Identities = 72/360 (20%), Positives = 133/360 (36%), Gaps = 48/360 (13%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 EP+ P + +Y ++ +K + FW EEVD+S+D +++L E++ Sbjct: 69 DEPLLRENPRRFVIFP-IEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + I E + E IHS Y+ +I + DP Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 +F+ I T ++K+A+ + + + Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGD-----------------------------KE 218 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 +++ A+E I F SFA F +R LM G LI+RDE LH M Sbjct: 219 ATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFK 278 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 L + + ++ + A + E+++ +IG+N ++ QY+E+ Sbjct: 279 HLVHKPSE-----------ERVREIIINAVRIEQEFLTEALP-VKLIGMNCTLMKQYIEF 326 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + + M +G F+ NP ++ +S + E V Y + S + Sbjct: 327 VADRLMLELGFSKVFRVE-NPFDFMEN--ISLEGKTNFFEKRVGEYQRMGVMSSPTENSF 383 >UniRef50_Q7LG56 Ribonucleoside-diphosphate reductase subunit M2 B n=134 Tax=root RepID=RIR2B_HUMAN Length = 351 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 75/373 (20%), Positives = 142/373 (38%), Gaps = 48/373 (12%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 + + ++++ +EP+ + Q Y K+ ++ + FW EEVD+S+D Sbjct: 18 SSSDTNESEIKSNEEPLLRKSSRRFVIFPIQ-YPDIWKMYKQAQASFWTAEEVDLSKDLP 76 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 + L EK+ L + D I + + +PE + E +HS Sbjct: 77 HWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSE 136 Query: 122 SYTHIIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 Y+ +I + DP +F+ I T ++K+A+ + + Sbjct: 137 MYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIAD------------------ 178 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 K +++ A+E + F SFA F +R LM G LI+RD Sbjct: 179 -----------RKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRD 227 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E LH M L + + + ++ V A + E+++ G +I Sbjct: 228 EGLHCDFACLMFQYLVNKPSE-----------ERVREIIVDAVKIEQEFLTEALPVG-LI 275 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 G+N ++ QY+E++ + + +G FQ NP ++ +S + E VS Y Sbjct: 276 GMNCILMKQYIEFVADRLLVELGFSKVFQAE-NPFDFMEN--ISLEGKTNFFEKRVSEYQ 332 Query: 359 VGQIDSEVDTDDL 371 + +E + Sbjct: 333 RFAVMAETTDNVF 345 >UniRef50_B7FPK4 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPK4_PHATR Length = 409 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 67/350 (19%), Positives = 134/350 (38%), Gaps = 50/350 (14%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQT 82 + + ++D + ++ ++ FW +E+D+S D D+ L ++E+H L + Sbjct: 92 SRFSLFP-IEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLAFFA 150 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFD 139 D I + +++PE + E IH +Y +I + ++DP ++F Sbjct: 151 GADGIVVENLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFA 210 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 ++K+A Y L+ Sbjct: 211 AHTKVPSVEKKARWAQRYIGS------------------------------DASFAERLV 240 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + A+E I F +F F +R LM G LI+RDE LH + + + L + Sbjct: 241 AFAAVEGIFFSGAFCSIFWLKKRGLMPGLTFSNELISRDEGLHCSFACQLYSKLERKLSE 300 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + + L +A + EK + G +IG+N ++ QYVE++ + + Sbjct: 301 TD-----------MHKLIGEAVEVEKGFVCDALPVG-LIGMNASLMSQYVEFVADRLLHD 348 Query: 320 VGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 +G + ++ NP W++ ++S + E V Y + + + D Sbjct: 349 LGYRTLYGSK-NPFDWMD--MISLEGKTNFFEKRVGEYQKSGVMASLSDD 395 >UniRef50_B4E5V8 Ribonucleoside-diphosphate reductase beta chain n=43 Tax=Bacteria RepID=B4E5V8_BURCJ Length = 403 Score = 293 bits (749), Expect = 9e-78, Method: Composition-based stats. Identities = 84/358 (23%), Positives = 152/358 (42%), Gaps = 28/358 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-- 65 + + + + + GQ +V + KY + + W P+E+++SRD ++ Sbjct: 65 EARVNVADKRIINGQT-DVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPN 123 Query: 66 -LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L E E+ I NL + DS+ + + I+ PE ++ AF E IH+ +Y Sbjct: 124 GLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQ 183 Query: 125 HIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 +I+ ++ D +F+ I+ + E + + HT+ Sbjct: 184 YIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFI-----------------HTLTDPAFK 226 Query: 185 VSLRELKKKLYLCLMSVNA-LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 E +KL L+ +E + FYV F A + M G A+ + I RDE++H Sbjct: 227 TGTLEADQKLLKSLIVFACIMEGLFFYVGFTQILALGRQNKMTGAAEQYQYILRDESMHC 286 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 ++N + ++P + E + E +LF QA + E +A+ G ++GLN Sbjct: 287 NFGIDLINQI--KLENPHLW--TAEFRAEIRELFKQAVELEYRYAEDTMPRG-VLGLNAS 341 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 + Y+ +I+N R Q +GLD F NP PW++ ++ + E V Y G Sbjct: 342 MFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSE-MIDLKKERNFFETRVIEYQTGG 398 >UniRef50_Q5K9L8 Ribonucleotide reductase small subunit, putative n=11 Tax=root RepID=Q5K9L8_CRYNE Length = 430 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 127/350 (36%), Gaps = 50/350 (14%) Query: 18 MFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFIS 76 + + KY+ + + + FW EE+D D ID+ + E E+ + Sbjct: 102 ILRESESRFVLFP-IKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQERFFILR 160 Query: 77 NLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 L + D I G + + I E + + E +HS +Y+ +I V D Sbjct: 161 ILAFFAASDGIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQE 220 Query: 137 ---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 +F + I+++A+ Y + + Sbjct: 221 KDFLFRGMTNIPCIKQKADWALKYITDELP------------------------------ 250 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLL 253 L++ +E I F SFA F +R LM G LI+RDE +H + N L Sbjct: 251 FRTRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLYNHL 310 Query: 254 RSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYIT 313 + E + + +A EK + ++IG+N ++CQY+E++ Sbjct: 311 KHRCST-----------DEVHHIVSEALVIEKQFLTDALP-CALIGINAHLMCQYMEFVA 358 Query: 314 NIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + +G + NP W+ L+S + E VS+Y + Sbjct: 359 DRLVVDLGYPKIYNAT-NPFDWME--LISLQGKANFFESRVSAYQKANVS 405 >UniRef50_P09938 Ribonucleoside-diphosphate reductase small chain 1 n=151 Tax=root RepID=RIR2_YEAST Length = 399 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 138/361 (38%), Gaps = 49/361 (13%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-L 66 + K + +EP+ + KY + ++ + FW EE+D+S+D D+ + Sbjct: 68 KLKEMEKEEPLLNEDKERTVLFP-IKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRM 126 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 E+E+ L + D I + + IPE +++ E IHS +Y+ + Sbjct: 127 NENERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLL 186 Query: 127 IRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 I + DP +F+ I T +I ++AE + + Sbjct: 187 IDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQD----------------------- 223 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 L++ ++E + F SFA F +R +M G LI RDE LH Sbjct: 224 ------ADALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHT 277 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 + L++ D + +A + E+ + +++G+N D Sbjct: 278 DFACLLFAHLKNKPDP-----------AIVEKIVTEAVEIEQRYFLDALP-VALLGMNAD 325 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 ++ QYVE++ + + A G ++ NP ++ +S + E VS Y + Sbjct: 326 LMNQYVEFVADRLLVAFGNKKYYKVE-NPFDFMEN--ISLAGKTNFFEKRVSDYQKAGVM 382 Query: 364 S 364 S Sbjct: 383 S 383 >UniRef50_Q9ZKC3 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Epsilonproteobacteria RepID=RIR2_HELPJ Length = 341 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 87/364 (23%), Positives = 165/364 (45%), Gaps = 34/364 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + + +F G P ++ ++ KY + L + L+ W EEV ++ D+ DY L Sbjct: 12 NSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLS 71 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 EK + L +DS+Q + + P I+ PE+ + A+ E +HS +Y ++ Sbjct: 72 AEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMV 131 Query: 128 RNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 +I + ++D + Q++ + + I+ Y EL + + Sbjct: 132 ESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPT--------------------- 170 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 ++ + L + LE I FY F+ + A M G+A++IR I RDE HL Q Sbjct: 171 ---EENILKALFANQILEGIYFYSGFSYFYTLARSGKMLGSAQMIRFIQRDEVTHLILFQ 227 Query: 248 HMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQ 307 +M+N LR+ D + E ++F +A + E W DY+ + G ++GL ++ Q Sbjct: 228 NMINALRNERAD----LFTPQLINEVIEMFKKAVEIEASWGDYITQ-GKILGLTSSLIEQ 282 Query: 308 YVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 Y++++ + R+ VG+ + + +PI W+ ++ + + E VS+Y G + Sbjct: 283 YIQFLADSRLSKVGIAKVYGVQ-HPIKWVESFSSFNEQRSNFFEARVSNYAKGSV----S 337 Query: 368 TDDL 371 DD Sbjct: 338 FDDF 341 >UniRef50_D1BPH6 Ribonucleotide reductase n=2 Tax=Firmicutes RepID=D1BPH6_VEIPT Length = 342 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 91/371 (24%), Positives = 169/371 (45%), Gaps = 37/371 (9%) Query: 5 TFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F++ D+ + M G N+ +++ KYD ++ L+ FW PEE+ ++ D + Sbjct: 6 IFNENG-DRGTQSMIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDVKQFP 64 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L ++E+ F + + LDSIQ + L I+ E+ + + AF E IH++SY+ Sbjct: 65 YLTDYERRAFDKIIAFLNFLDSIQSENL-PNLSRYITASEVASLLNIQAFQEEIHAQSYS 123 Query: 125 HIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +I+ + N ++D+ T++ + +R I+ Y + S Sbjct: 124 YILDTVTNPITRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEA-------------- 169 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L +++ LE I FY F+ + A + M + I + I RDE H Sbjct: 170 ----------NLIHTIIANYILEGIYFYSGFSFFYTLARQGKMTATSTIFKYINRDEVTH 219 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 L Q+++ LR D E + + D+ Q A+ E W Y+ D ++GLN Sbjct: 220 LVLFQNIIRELRRERPD----LFTPELEAKITDMIRQGAENEIAWGQYITDD-KILGLNN 274 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ +Y++Y+ NIR++A+GL + + NP+ WI ++ ++ + E +V++Y Sbjct: 275 VLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKAA 334 Query: 362 IDSEVDTDDLS 372 D DDL Sbjct: 335 ---AFDFDDLE 342 >UniRef50_A8NX45 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NX45_COPC7 Length = 386 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 119/352 (33%), Gaps = 70/352 (19%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + Y Q Y ++ + FW EE+D+S D +D+ L E+H Sbjct: 32 EEPLLKPSPKRLTLYPIQ-YPEIWTHYKRAQASFWTAEEIDLSHDMMDWSKLTNAERHFL 90 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + +PE + E +HS +Y+ +I + DP Sbjct: 91 SRILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDP 150 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 +F I T IQ++AE ++ + Sbjct: 151 EERDFLFRAIETIPSIQRKAEWALTW-----------------------------TSDKS 181 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 L++ +E + F SFA F +R L+ G LI+RDE +H + Sbjct: 182 TTFAERLVAFAVVEGVFFSGSFAAIFWMRKRGLLPGLTFSNELISRDEGMHTDFACLLFA 241 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 LR + +A + EK++ + Sbjct: 242 YLRKRP-----------HSDTILAIVTEAVEIEKEF-----------------------F 267 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + + ++G D + NP ++ L+S + E VS Y + Sbjct: 268 SADRLLTSLGNDKHYHVD-NPFDFME--LISMEGKANFFEKRVSDYAKANVS 316 >UniRef50_C3XIX4 Ribonucleotide-diphosphate reductase subunit beta n=4 Tax=Campylobacterales RepID=C3XIX4_9HELI Length = 351 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 85/361 (23%), Positives = 163/361 (45%), Gaps = 30/361 (8%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + + +F G P + ++ KY L+ + W PEEV++++D+ DY L Sbjct: 21 HSTESVNERRIFGGNPTAIFELNKIKYQWAYNLLRTMFANTWFPEEVNMNQDKRDYMELT 80 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 EK + L +DS+Q + + P I+ PE+ + AF E++H++SY ++ Sbjct: 81 LQEKQGYDRALAQLIFMDSLQTNNLTDNINPYITCPEINMLLVRQAFEESLHAQSYAVMV 140 Query: 128 RNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 +I + ++ +++++ + + I+ Y +L + + Sbjct: 141 DSISANTDEIYQMWRKDDKLRSKNDYIADVYTDLAKNPTET------------------- 181 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 L + + LE I FY FA + A M+ +A++IR I RDE HLT Sbjct: 182 -----NLIKAMFANQILEGIYFYSGFAFFYTLARSGKMQNSAEMIRFIQRDEITHLT--- 233 Query: 248 HMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQ 307 + + + + E ++F QA E W +Y+ + G ++GL I+ Q Sbjct: 234 -IFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWGEYITQ-GQILGLTAKIIRQ 291 Query: 308 YVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 Y+EY+ + R++AV + + T+ NPI W++ + +N + E +V +Y G++ E D Sbjct: 292 YIEYLADKRLKAVDYPILYNTQ-NPIQWVDEQVNFNNQRTNFFEAKVRNYTRGELKFEDD 350 Query: 368 T 368 Sbjct: 351 F 351 >UniRef50_O83092 Ribonucleoside-diphosphate reductase subunit beta n=80 Tax=Bacteria RepID=RIR2_TREPA Length = 351 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 149/366 (40%), Gaps = 36/366 (9%) Query: 6 FSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F++ + + K M G N+ ++ KY K + ++ FW PEE+++S D DY+ Sbjct: 14 FNEAGDIELHKRRMVGGNTTNLNDFNNMKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYR 73 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L EK + L + LDSIQ + + I+ E+ + AF E +HS+SY+ Sbjct: 74 NLSAIEKTAYDKILSFLIFLDSIQTANL-PNIGQYITANEINLCLTIQAFQEAVHSQSYS 132 Query: 125 HIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +++ I + + +E + R + I + Y+E + S Sbjct: 133 YMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFQDDKSVL-------------- 178 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L ++ LE I FY F + M G+ + IR I RDE H Sbjct: 179 ----------ALLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENTH 228 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 L + + E + D+ + +QE W DY+ D + GLN+ Sbjct: 229 L----WLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGD-QIPGLNR 283 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 ++ Y+ Y+ N+R + +G + ++ + W++ + ++ ++ E + ++Y Sbjct: 284 HMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYAK 343 Query: 360 GQIDSE 365 + Sbjct: 344 SSAMVD 349 >UniRef50_C7U0I3 Putative uncharacterized protein n=2 Tax=unclassified Phycodnaviridae RepID=C7U0I3_9PHYC Length = 389 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 75/360 (20%), Positives = 141/360 (39%), Gaps = 50/360 (13%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 ++ EP+ + KY +L +K W EEVD+S+D D++ L E+E+ Sbjct: 70 EEEYEPILASTLNRFTVFP-LKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQ 128 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 L + D I + N + I E ++ +E +H +Y+ +I + Sbjct: 129 KFIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYI 188 Query: 132 NDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 DP +F+ I T I+K+A+ ++D Sbjct: 189 KDPSEKKELFEAIQTVPCIEKKAQWAMKWFD----------------------------- 219 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 + L + +E I F SF F +R LM G LI+RDE LH Sbjct: 220 TKSRSFAERLFAFACVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHQEFAVE 279 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 + LR+ + + +A EK + ++IG+N + + +Y Sbjct: 280 LFKTLRNRPG-----------VDTIHAIVREAVDIEKGFILDALP-CNLIGMNSEKMSEY 327 Query: 309 VEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 +EY+++ ++ +G+ + ++ NP ++ +S + + E V Y G++D + D Sbjct: 328 IEYVSDRLLKQIGVPTIWNSK-NPFDFMEN--ISLDGKTNFFEKRVGDY--GKLDDDTDE 382 >UniRef50_C8WWZ0 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C8WWZ0_ALIAD Length = 369 Score = 280 bits (715), Expect = 7e-74, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 166/368 (45%), Gaps = 36/368 (9%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQAL 66 ++ D K + G N+ + KY+ KL ++ FW PEE+ ++ D Y L Sbjct: 35 AEGDRDWGKRRIIGGNTTNMIELNNIKYEWAYKLYRAMMNNFWIPEEIPLADDARQYDLL 94 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 + E+ + L + +DS+ + + I+ PE+ + AF E +HS+SY ++ Sbjct: 95 SDDERRSYNKVLSFLIFMDSLLTHNL-PNINEYITAPEVNLCLTVHAFQEAVHSQSYGYV 153 Query: 127 IRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 + ++VN ++++ ++ + +R + I+ ++E IE + Sbjct: 154 LDSVVNPATRDQIYNEWRNDDHLLRRNQFITDLFEEFIENPT------------------ 195 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 + L +++ LE + FY F F + M G I+ I RDE HL Sbjct: 196 ------DRNLMKTIVANYILEGVYFYAGFGFFFVLGRQGKMLGTVSEIKFIQRDELTHLA 249 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 +++ + + + + ++E ++ A Q E W Y+ + G ++GL + Sbjct: 250 IFRNLYHEIIRENP----GIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQ-GKIVGLTDAL 304 Query: 305 LCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 + Y++Y+ N+R+Q++ L + + + +P+PW++++ ++ + E V++Y Sbjct: 305 IDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA--- 361 Query: 364 SEVDTDDL 371 ++ DDL Sbjct: 362 GNLNWDDL 369 >UniRef50_C9LBQ7 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Firmicutes RepID=C9LBQ7_RUMHA Length = 359 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 79/362 (21%), Positives = 155/362 (42%), Gaps = 36/362 (9%) Query: 6 FSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F+ + + D M G N+ ++ +Y + + ++ FW PEE+++S+DR DY Sbjct: 22 FNPSGDTDVRFRRMIGGNTTNLNDFNNMRYGWVKGWYRQAMNNFWIPEEINLSQDRKDYG 81 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L E+ + L + LDSIQ + + I+ E+ + F E +HS+SY+ Sbjct: 82 ELLGKERQAYDKILSFLVFLDSIQSANL-PCIGEYITANEINLCLSIQTFQECVHSQSYS 140 Query: 125 HIIRNIV--NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +++ I + + T+E++ KR I Y+E + Sbjct: 141 YMLDTICSPEKRNEILYQWKTDERLLKRNTFIGELYNEFQMKKDSF-------------- 186 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L +M+ LE I FY F + + M G+A+ IR I RDE H Sbjct: 187 ----------TLLKVMMANYILEGIYFYSGFMFFYNLSRNGKMPGSAQEIRYINRDENTH 236 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 L + + + E +E Q ++ ++ +QE W Y+ D + G++K Sbjct: 237 L----WLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGD-DIPGISK 291 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQT---RSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +++ +Y++Y+ N+R +G D+ + + W++ + ++ V+ E + ++Y Sbjct: 292 EMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYAK 351 Query: 360 GQ 361 Sbjct: 352 ST 353 >UniRef50_O84835 Ribonucleoside-diphosphate reductase subunit beta n=182 Tax=cellular organisms RepID=RIR2_CHLTR Length = 346 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 70/357 (19%), Positives = 145/357 (40%), Gaps = 27/357 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-- 65 Q + + + + V+V + KY + + W P E+ + +D +++ Sbjct: 10 QKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDR 69 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L E E+ + + NL + + +S+ G + +A+ ++ PE ++ AF E +H+ ++ + Sbjct: 70 LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLY 129 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 I ++ D +F+ I+ + + T V Sbjct: 130 ICESLGLDEKEIFNAYNERAAIKAKDDFQME-----------------ITGKVLDPNFRT 172 Query: 186 SLRELKKKLYLCLMSVN-ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 E ++ L+ +E I FY F +F + M G + + I RDE +HL Sbjct: 173 DSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLN 232 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 ++N ++ + E +QE +L +A E ++A G ++GL + Sbjct: 233 FGIDLINGIKEENPE----IWTPELQQEIVELIKRAVDLEIEYAQDCLPRG-ILGLRASM 287 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 YV++I + R++ +GL + T+ NP PW++ + + + E V Y Sbjct: 288 FIDYVQHIADRRLERIGLKPIYHTK-NPFPWMSETIDLNKEK-NFFETRVIEYQHAA 342 >UniRef50_Q67SN7 Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67SN7_SYMTH Length = 346 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 89/366 (24%), Positives = 155/366 (42%), Gaps = 35/366 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + D K + G P N+ KY+ +KL + L FW PEEV + D Y L Sbjct: 14 HGERDWGKRRIIGGNPTNIMELTNVKYEWAQKLSDIMLRNFWIPEEVPLLDDAKQYLELT 73 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 E+ + L + +DSI S L+ ++ PE+ + F E +HS+SY +++ Sbjct: 74 ADEQWAYDRMLSFVIFMDSILTVS-MPNLINYVTAPEINMCLSIHNFHEALHSKSYGYVL 132 Query: 128 RNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 ++V ++D + Q+ +R I++ + + + Sbjct: 133 ESVVPAERRQYIYDLWREDRQLLERNRYIANTFQLFADNPT------------------- 173 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + M+ LE I FY FA +A A M+G A I+ I RDE H+ Sbjct: 174 -----DEHFVRACMAQYVLEGIYFYSGFAFFYALARMGKMKGTATEIQFINRDEITHVAV 228 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 Q++LN LR + + + QAA+ E WA Y + + GL+ ++L Sbjct: 229 FQNILNGLRQERPQ----LFTPQLDADLRAMIRQAAEHEMAWAAYCVGN-RIQGLSGEVL 283 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSE 365 YV+++ + R +A+G + + NPI W+ ++ + + E V++Y Sbjct: 284 QGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKST---N 340 Query: 366 VDTDDL 371 +D DDL Sbjct: 341 IDLDDL 346 >UniRef50_C9KMB3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB3_9FIRM Length = 347 Score = 271 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 151/359 (42%), Gaps = 35/359 (9%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + D + + G N+ ++ KY + ++ FW PEE+++ +D DY+ LP Sbjct: 13 EGDIDVTQRRLIGGNTTNMNDFNNLKYTWTADWYRQAMNNFWIPEEINLGQDVKDYRQLP 72 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 E+ + L + LDS+Q + + I+ E++ + +F E +HS+SY++++ Sbjct: 73 AAERRAYDKILSFLVFLDSVQSANL-PNVSAYITANEVDLCLTIQSFQECVHSQSYSYML 131 Query: 128 RNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 I ++ + +E + R I Y+E + Sbjct: 132 DTIASPDERQEIIFQWKDDEHLLARNTFIGDLYNEFQQ---------------------- 169 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 + ++ L++ LE I FY F + M G+ + IR I RDE HL Sbjct: 170 --EQSRENFLRVLIANYILEGIYFYSGFMFFYNLGRIGRMPGSVQEIRYINRDENTHLWL 227 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 +++L LR+ D E ++ ++ + +QE W Y + + GLN+ ++ Sbjct: 228 FRNILRDLRAEEPD----LFTPEREEMMREMIREGVRQEIAWGKYAIGN-EVEGLNEKMI 282 Query: 306 CQYVEYITNIRMQAVGLDLPF---QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 YV Y+ N R +++GL + + + + W++ + + ++ E ++Y Sbjct: 283 EDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYAKST 341 >UniRef50_Q9INE3 Ribonucleotide reductase small subunit n=3 Tax=Shrimp white spot syndrome virus RepID=Q9INE3_WSSV Length = 413 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 67/368 (18%), Positives = 142/368 (38%), Gaps = 48/368 (13%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 +T + D K + P ++ ++ +K+++ FW EE+D RD D Sbjct: 44 FTKKLIMQVDTFKHLLTRENPNRFVSRPIV-HEDLWEMYKKEVACFWTLEEIDFERDPKD 102 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 ++ L + EK + L + D I + L + IPE ++ + E+IH Sbjct: 103 WEKLTQDEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNV 162 Query: 123 YTHIIRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 Y +I +V D ++F+ I+K+ + ++ + Sbjct: 163 YGELIDRLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQSNND---------------- 206 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 L +++ A+E I F +FA F R ++ G I+RDE Sbjct: 207 --------------LAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGLTSSNEFISRDE 252 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 LH +L ++ ++ +A + E+++ ++G Sbjct: 253 GLHRDFACMLLKKGFVDTP----------SRERILEIVTEAVRIEQEFLTVSLP-VKLVG 301 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +N ++ QY+E++ + + +GL+ + NP P+++ +S + E V+ Y Sbjct: 302 MNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN--ISLENKTNFFEKRVAEYQR 358 Query: 360 GQIDSEVD 367 Q+ + ++ Sbjct: 359 AQVMASIN 366 >UniRef50_C4L4U4 Ribonucleoside-diphosphate reductase n=2 Tax=root RepID=C4L4U4_EXISA Length = 346 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 79/376 (21%), Positives = 156/376 (41%), Gaps = 37/376 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + K+ + G+ ++ ++ Y F + ++ LS FW P+E+ +S+D Sbjct: 3 IQKIKLLSPKHPNRATAIIGGETSSIVNWNDIAYPQFYTIYKQLLSNFWIPDEISMSKDM 62 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E E+ F + ++LDS+Q R + + + + A E +H+ Sbjct: 63 QQWPQLTEREQDAFKRIIGLLSILDSVQTRYILESSMFSSDSS-VHAVLAVIAQQEVVHN 121 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ ++V + + +F+ +E + KR + I Y+ E + Sbjct: 122 QSYSYVLSSLVPLAEQNRIFNIAKDDEMVMKRNQFILDLYEAFRETPN------------ 169 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++ LE I FY FA + A + M G + +I I RD Sbjct: 170 ------------AENFAKSLVASVILEGINFYSGFAYFYNLARHQKMVGTSTMISYIQRD 217 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H +L + + + + Q YD +A E +W +Y+ RD + Sbjct: 218 EMQHSYFISQLLRAVLTENPK---IDENGQFSQFVYDTMAEAVDLEIEWCEYVLRD--LD 272 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQT-RSNPIPWINTWLVS--DNVQVAPQEVEVS 355 GL+ + YV+Y+ N R++ +GL+ ++ + +PWI + + + E + Sbjct: 273 GLDVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSDFFEQKSR 332 Query: 356 SYLVGQIDSEVDTDDL 371 SY + DDL Sbjct: 333 SYAK--VTDANGFDDL 346 >UniRef50_B7GK18 Ribonucleotide reductase, beta subunit n=4 Tax=root RepID=B7GK18_ANOFW Length = 345 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 78/372 (20%), Positives = 154/372 (41%), Gaps = 34/372 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + + + + G+ + ++ KY F + + L FW P E+++S D Sbjct: 3 LTKVKLLEPSHPNKATSIINGKASGILNWNDIKYSHFYDIYKMLLGNFWTPFEINMSDDI 62 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + AL E E+ F+ + ++LDS+Q A+ I+ P ++ E +H+ Sbjct: 63 KQWHALSERERDAFLHIIGLLSILDSVQPNFIG-AMKEYITDPSVKAIFSIIEQQEVVHN 121 Query: 121 RSYTHIIRNI--VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ +I +++ F+ TN I KR E + Y+ E + Sbjct: 122 QSYSYVLASIEKLSEQHRAFEMARTNPHIYKRNEHVIRVYEAFREQPTV----------- 170 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + L++ LE I FY FA + A + M + +I I +D Sbjct: 171 -------------ETFCRALVASLVLEGINFYSGFAFFYNLARNQKMLKTSTMISYINKD 217 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H ++ + ++P++ E YD +A + E +W+ ++ RD + Sbjct: 218 ELCHSYFISQLVRAVL--WENPQIDENGA-FSAWIYDYIDEAIRYETEWSRFVLRD--ID 272 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL--VSDNVQVAPQEVEVSS 356 G++ + +Y+EY+ N R++ +GLD + N +PWI + + + E S Sbjct: 273 GIDVIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGKTDFFEARPRS 332 Query: 357 YLVGQIDSEVDT 368 Y + D Sbjct: 333 YTKTTDVNGFDE 344 >UniRef50_C8XUI5 NrdB ribonucleotide reductase subunit beta n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI5_9CAUD Length = 367 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 160/369 (43%), Positives = 213/369 (57%), Gaps = 14/369 (3%) Query: 2 AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRI 61 ++ F + N+ FFG PV++ RYD + +K EK LS FWRPEEVD+++D+ Sbjct: 6 QFSVFDPSSNNTGLP--FFGDPVSIQRYDIVAWPFVQKWYEKGLSQFWRPEEVDITKDKA 63 Query: 62 DYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 DY L EK I+ SNLK QT+LDSIQG +P A P S PE++ V W E IHS Sbjct: 64 DYATLTPAEKRIYESNLKRQTMLDSIQGAAPFEAFGPWASTPEMQFAVLEWTRQEAIHSL 123 Query: 122 SYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 SYTHI+RN VNDP +VFD ++ +I A IS++YD+++ G Sbjct: 124 SYTHILRNTVNDPGIVFDHVLDVAEIVDCAHQISTHYDDMVR--------YSGMRMAGRA 175 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEA 240 + K+ + L + N LE IRFYVSFACS+AF + ++ MEGNAKIIR IARDE Sbjct: 176 FTREDIMNAKRAFWRALFAANTLEGIRFYVSFACSWAFTQFQKKMEGNAKIIRQIARDEQ 235 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 HL TQ +LN L DP+ I EE + E +F+ QEK WADYLF+DGSM+GL Sbjct: 236 DHLILTQTLLNRL--PGMDPDFEIIREELRGEMTQMFLDVGNQEKQWADYLFQDGSMLGL 293 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQT-RSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 N IL V+++ RM A+G P + + P+PWIN WL + +Q A QE E YL+ Sbjct: 294 NAKILHHMVDWLLTHRMGAIGHPYPGEPRKECPVPWINEWLNNKTMQYALQEAEAPDYLM 353 Query: 360 GQIDSEVDT 368 G + V Sbjct: 354 GVLTGSVSD 362 >UniRef50_C0ACD0 Ribonucleoside-diphosphate reductase n=2 Tax=Verrucomicrobia RepID=C0ACD0_9BACT Length = 362 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 132/361 (36%), Gaps = 29/361 (8%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA---LPEHEKH 72 + + G+ KY L + W PE++ + +D ++ + + E+ Sbjct: 26 KRVINGRETMTFNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERW 85 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 I + Y + + I G + L++ PEL+ + A E IH+ S ++I ++ Sbjct: 86 IIRMGIGYFSAAEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGI 145 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +P I ++ E + + + ++ E K+ Sbjct: 146 NPHECEAMFEDIPTIVRKNEFVVK------------------NSRQLRRDLDLTQPENKQ 187 Query: 193 KLYLCLMSV-NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 L + +E +FY F + + G ++ R RDE+ H+ +++L Sbjct: 188 LLARNMFLFGQCMEGTQFYGLFGMILSLYRQNKFPGIGQMFRYTLRDESNHIEVFRNLLM 247 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 L + K+E + +A EK++ + +GL D Y++Y Sbjct: 248 DLVEENPE----IWTPGFKEELRETMREAVTLEKEFIRDCLP-VNAVGLAVDEFLTYIDY 302 Query: 312 ITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 I + R++ VGL NP+PW+ + Q E V+ Y + D+ Sbjct: 303 IADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQ-NFFEGRVTEYQKASSLAVTHDDE 361 Query: 371 L 371 L Sbjct: 362 L 362 >UniRef50_C7NLI2 Ribonucleotide reductase, beta subunit n=21 Tax=Actinomycetales RepID=C7NLI2_KYTSD Length = 365 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 74/375 (19%), Positives = 147/375 (39%), Gaps = 31/375 (8%) Query: 1 MAYTTFSQTK-NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRD 59 M T ++ D +K+ P +Y F ++ + W EE+D+ D Sbjct: 15 MTSETHLESDLRDAVKQGSSLLDPGMSLTLRPMRYPQFYEMFRDAIKNTWTVEEIDLHSD 74 Query: 60 RIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 D L E+H+ + + D+I + + L I+ PE ++ F E + Sbjct: 75 LADLHNKLSPAERHLVSRLVAFFATGDTIVANNLVLNLYEHINSPEARLYLSRQLFEEAV 134 Query: 119 HSRSYTHIIRNIVNDPSVVFDDI---VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGT 175 H + Y ++ V D + F+ I+ +AE ++ D + + Sbjct: 135 HVQFYLTLLDTYVPDEAERFEAFAAVENIPSIRTKAEFCFTWIDSIENLGQ--------- 185 Query: 176 HTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLI 235 + + ++ L + +E + FY +FA + R L+ G A + Sbjct: 186 --------LETKEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWV 237 Query: 236 ARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG 295 RDE++H+ ++ +RS D E + + ++A E +A+ L G Sbjct: 238 FRDESMHMAFAFEVVETVRSEEPD----LFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMG 293 Query: 296 SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 + GL+ + Y+E + + R +G+ + T+ NP+ ++ V + E VS Sbjct: 294 -VAGLSVADMRAYLENVADRRAVQLGMPEIYGTK-NPLAFMELQDVQEL--SNFFERRVS 349 Query: 356 SYLVGQIDSEVDTDD 370 +Y VG ++ V D+ Sbjct: 350 AYQVG-VEGSVSFDE 363 >UniRef50_B9L2K6 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K6_THERP Length = 328 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 72/349 (20%), Positives = 144/349 (41%), Gaps = 27/349 (7%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKH 72 + + G P+ + +++ W PEEV + D D+ L + E+ Sbjct: 1 MARRLLGGDPLAAVELFPLSHPWAYAHVQQAKHNTWFPEEVPLHDDVRDWHERLSDEERR 60 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 L + ++S+ + ++L ++ PE ++ A+ E H ++ ++I+ + Sbjct: 61 AVEMFLGFFNPMESLVTTNLLLSLYRAVTAPEARLYLARQAWEEANHVMAFEYVIKTLPL 120 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 D VF V + + + T V E + Sbjct: 121 DRERVFGLHVEHPAVAAKELF------------------QRQLAEQWLVTPDVESVEGLQ 162 Query: 193 KLYLCLM-SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 +L L+ LE I FY FA + AF +R L+ G I+ + +DE+LHL+ H++ Sbjct: 163 RLVRNLVGYFVILEGIFFYSGFALALAFRQRNLLRGLCTIVDWVLKDESLHLSFGIHLIT 222 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + + ++ ++ +L ++A + E+ + + + +IGL+ D+L +YV Y Sbjct: 223 TILEEHPE----IMSAAFGRQLRELILRAVELEEAYNRAVLPE-PLIGLDADVLNRYVRY 277 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 I + R++ +GL + F NP+ W+ + + V E Y VG Sbjct: 278 IADRRLEELGLPIAFG-EPNPLRWMVAQVDMPEI-VNFFEARNIHYEVG 324 >UniRef50_C6IYS7 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Bacillales RepID=C6IYS7_9BACL Length = 343 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 74/376 (19%), Positives = 150/376 (39%), Gaps = 38/376 (10%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 M T T+ + G+ + ++ + KL + L W +E+ +++D Sbjct: 1 MQLQTIFNTEAPNKSTRIIGGECSGILNWNDIRMPHMYKLYKVLLLNHWIADEIPMAKDA 60 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E+ F N+ +LDS+Q + + LE E +H+ Sbjct: 61 QQFALLDPEEQRTFKINISLLAVLDSMQTMFVGD-VKRYFTDSSLEAISAIIGQQEVVHN 119 Query: 121 RSYTHIIRNIVNDPS--VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ +IV++ +F+ + + R + I++ Y + + Sbjct: 120 QSYSYVLSSIVSEQEQKEIFEYWKHDPVLLDRNKFIANIYQNFRDEPT------------ 167 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + + L++ LE I FY +FA + A + M G +++I I RD Sbjct: 168 ------------PQSFFEALVADLILEGIFFYSTFAFFYNLARDQKMMGTSQMISYIQRD 215 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E H + L + +E Y +A + E +WA Y ++ + Sbjct: 216 ENQHCYFFAEVFKQLLIDYPE----LNTKENIDYAYRTIDRAVELETNWAHYTLKN--VP 269 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLV--SDNVQVAPQEVEVS 355 G++ + L Y++YI N R+ +GL+ + N +PWI + + + E + Sbjct: 270 GIDLNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSR 329 Query: 356 SYLVGQIDSEVDTDDL 371 +Y G++ + DDL Sbjct: 330 NY--GKVGDDNGFDDL 343 >UniRef50_Q9KFH7 Ribonucleoside-diphosphate reductase subunit beta n=13 Tax=Bacillales RepID=RIR2_BACHD Length = 345 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 77/374 (20%), Positives = 154/374 (41%), Gaps = 35/374 (9%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + T + G+ NV +D ++ L + L+ FW P E+++S D Sbjct: 4 LQKRKIYDTTASNASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDA 63 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + L E E+ F + LDS+Q ++ ++ L + +F E +H+ Sbjct: 64 KQFPTLTETEQEAFKKIIGLLAFLDSVQT-DYSMRAAEYLTDSSLAALMSVLSFQEVVHN 122 Query: 121 RSYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 +SY++++ ++V +F+ ++ +++R E I Y++ ++ + Sbjct: 123 QSYSYVLSSLVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPT------------ 170 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 K ++ LE + FY FA + A + M + +I I RD Sbjct: 171 ------------PKTFLESIVYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRD 218 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI 298 E LH+ ++ L + EE K ++AA EKDW Y+ D + Sbjct: 219 EQLHVYLFTNIFKELLVEFPE----LNTEETKTFVKTTLMKAADLEKDWFRYIIGD-KIP 273 Query: 299 GLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSY 357 G+N + + Y+ +I N R +G++ P+ + NP+ WI + ++ + E + Y Sbjct: 274 GINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQY 333 Query: 358 LVGQIDSEVDTDDL 371 + ++ D+L Sbjct: 334 AK--VSADNGFDEL 345 >UniRef50_B0TZS9 Ribonucleoside-diphosphate reductase n=20 Tax=Proteobacteria RepID=B0TZS9_FRAP2 Length = 410 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 68/342 (19%), Positives = 133/342 (38%), Gaps = 37/342 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--ALPEHEKHIFISNLKYQTLLDS 86 Y Y L K W +E+D+S D D++ + + EK + L+ T D Sbjct: 100 YKPFSYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDV 159 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 G++ +PL E+ + ++A E IH R+Y + + P + + + Sbjct: 160 AVGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGL-PDSEYHAFLEYKA 218 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 + + + + + ++ L LCL E Sbjct: 219 MTDKIDFMMD-----------------------------ANPNTRRGLGLCLAKTVFNEG 249 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + SFA F M+G K++ RDE++H+ G + + + Sbjct: 250 VALFASFAMLLNFQRFGKMKGMGKVVEWSIRDESMHVEGNAALFRIYCQENP----YIVD 305 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + K+E Y + +A + E + D + G++ GL D + +Y+ +IT+ R+ +GL+ + Sbjct: 306 NQFKKEIYLMASKAVELEDKFIDLAYEIGTIEGLKADEVKEYIRHITDRRLNQLGLNEIY 365 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+ W+ W+++ E V+ Y V + D Sbjct: 366 NIDKNPLTWLE-WILNGADHTNFFENRVTEYEVAGLTGNWDE 406 >UniRef50_B0R7R4 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Halobacteriaceae RepID=B0R7R4_HALS3 Length = 331 Score = 258 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 133/341 (39%), Gaps = 28/341 (8%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY--QALPEHEKHIFISNLKYQTLLDSIQ 88 YD + ++ ++ W PEEV + D + L + E+ + NL + + +S+ Sbjct: 17 PIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAESLT 76 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + +A+ ++ PE ++ A+ E +H+ ++ + ++ DP ++ I Sbjct: 77 ANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGFDPEHMYGMYDRIPSIA 136 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 ++ E + + + + + +E I Sbjct: 137 EKDEFVVGLTRAVDDQAFTIDTDDDLRDFLRDLVG----------------FYVIMEGIF 180 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 FY FA A R M G + I RDE+LHL ++N +R D A+ Sbjct: 181 FYAGFAMMLALKRRGKMVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVWTAD---- 236 Query: 269 CKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQT 328 + E L A E+ +A D ++G++ + YVEY+ + R Q + +D + T Sbjct: 237 FEAEVNSLMRDAVDLEQLYARDACPD-DLLGMSSEQFADYVEYVADRRFQQLRMDPVYGT 295 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 NP PW+ + + + E VS Y G +D D Sbjct: 296 D-NPFPWMTEQVDLNT-ETNFFERNVSEYQQG---GSLDWD 331 >UniRef50_B0U5P0 Ribonucleoside-diphosphate reductase n=41 Tax=Bacteria RepID=B0U5P0_XYLFM Length = 349 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 78/370 (21%), Positives = 146/370 (39%), Gaps = 37/370 (10%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 + +N + G+ + ++ Y F + ++ + FW P+EVD+ D+ Y Sbjct: 13 ILEPRNPNRSTGIINGKTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDKRQYGE 72 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L EK+ + + + LDS Q R + I+ P E IH+ SY++ Sbjct: 73 LSAREKNAYDAIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHNESYSY 131 Query: 126 IIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 ++ +I + + + VF+ T+ I KR I YD+ + + Sbjct: 132 VLASITDLANQNRVFEIARTHPTILKRNAPIMQAYDDFMREKT----------------- 174 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 + L L+ + LE I FY FA + + M G KII I RDE H Sbjct: 175 -------AETLLYSLIQSSILEGINFYSGFAYFYNLVRQNRMTGTGKIISFINRDELAHT 227 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 ++ + + + + + F A + E W + + G++ + Sbjct: 228 KFISEVIRAIVGENPELQT----DALTDYVHQAFAHAIELETQWTGEVLN--GIDGIDVE 281 Query: 304 ILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVS-DNVQVAPQEVEVSSYLVGQ 361 + +YV+Y N +G++ + +T N +PWI + + + E+ +SY Sbjct: 282 EMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKKTN 341 Query: 362 IDSEVDTDDL 371 +D+ DDL Sbjct: 342 VDN--CFDDL 349 >UniRef50_A4XD08 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=A4XD08_SALTO Length = 350 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 143/358 (39%), Gaps = 29/358 (8%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E P +Y F ++ + W EEVD+ D D L E+H+ Sbjct: 17 ERHLLLDPGMDLTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAKLSSAERHLVS 76 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 + + D+I + + L ++ PE ++ F E +H + Y +++ V + Sbjct: 77 RLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEK 136 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 F + I ++AE + D + E+ + + + Sbjct: 137 ERFAAFAAVENIPSIARKAEFCFRWIDSIFELRE-----------------LRTQADRRA 179 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L + +E + FY +FA + R L+ G A + RDE++H+ +++ Sbjct: 180 FLLNLICFAACIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDT 239 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 +R+ D + +++ ++ +A E +A+ L G + GL+ + +Y++++ Sbjct: 240 VRAEEPD----LFDADLERQVKEMVAEAVDCEVQFAEDLLEQG-VSGLSLADMREYLQHV 294 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 + R+ +G+ + + +NP ++ V + E VS+Y +G + V DD Sbjct: 295 ADRRLVTLGIAPMYGS-ANPFAFMELQDVQEL--SNFFERRVSAYQMG-VSGSVTFDD 348 >UniRef50_Q8QNF1 EsV-1-128 n=3 Tax=Phaeovirus RepID=Q8QNF1_ESV1 Length = 419 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 135/348 (38%), Gaps = 50/348 (14%) Query: 21 GQPVNVARYD---QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 ++ + +Y +L +KQ + FW EE+D+S D D++ EKH Sbjct: 101 EDFDRFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLV 160 Query: 78 LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV- 136 L + LD I + + I IP++ +E +H SY+ +I+ D Sbjct: 161 LAFFASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQ 220 Query: 137 --VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKL 194 V I T I+K+A + + L Sbjct: 221 RHVMRSIQTMPIIEKKALWAEKWMN-----------------------------PETASL 251 Query: 195 YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR 254 L+ LE ++F SF + +R+ +G + LIARDE LH T + + L+ Sbjct: 252 AERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIARDEGLHATASVLIYKHLK 311 Query: 255 SGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 + ++ +++F A E ++ ++IG+++ + +Y++++ + Sbjct: 312 NRLP-----------RERVHEIFKHAVSVECEFISSALP-VALIGISEKSMTEYIKFVAD 359 Query: 315 IRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + +G D + +NP W++ ++S + E V+ Y + Sbjct: 360 YWLNQLGYDKVYNC-ANPFEWMD--MISLQGKTNFFENRVAEYSKPGV 404 >UniRef50_P74732 Slr0591 protein n=35 Tax=Bacteria RepID=P74732_SYNY3 Length = 355 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 169/373 (45%), Gaps = 44/373 (11%) Query: 5 TFSQTKNDQL-KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ T ND + ++FG N+ + + +Y+ L ++ FW P+ +D+++D DY Sbjct: 17 IFNPTGNDSVENRTIWFGNTTNLMQLNDVRYNWAVGLYQQMRENFWIPQRLDITQDVTDY 76 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 L E++ F L Y T LDS+Q + L ++ PE+ + E +H++SY Sbjct: 77 WNLTNEERYAFDGILSYLTFLDSVQTCNI-PHLKSSVTAPEISLCMAEQISQEGMHNQSY 135 Query: 124 THIIRNIVNDP--SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 ++I I+ V++ T+ +++R E I+ Y + ++ + Sbjct: 136 QYMIETIIPTEKRDKVYEFWRTDRVLKERCEYIAMLYQKYVDHPT--------------- 180 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 ++ ++ LM+ LE + FY F + A R LM G+A I ++I RDE Sbjct: 181 ---------QENYFIALMADYLLEGLYFYNGFIYFYNLASRMLMPGSADIFKMINRDELS 231 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H+ Q ++ PE ++ + Y++F +A + E W +++ + +++G+ Sbjct: 232 HVRLYQKLI---------PEAMQVFTHSTDQIYEMFDKAVEFECRWTNHIVGN-NILGIT 281 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTR---SNPIPWINTWLVSDN---VQVAPQEVEVS 355 + QY +Y+ N R++A+GLD + +P + + + + E V+ Sbjct: 282 ESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEAHTKANFFEATVT 341 Query: 356 SYLVGQIDSEVDT 368 SY++ S D Sbjct: 342 SYVMSSGVSGWDE 354 >UniRef50_B4D9U7 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=B4D9U7_9BACT Length = 390 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 133/359 (37%), Gaps = 27/359 (7%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHI 73 + + G KY ++ ++ + W P+ +D++RD + L E+ I Sbjct: 55 KRVINGLRSAELNVLPLKYHEAYRIYKQMKANHWEPDVIDMTRDSQQWNTGALSPKERWI 114 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 + Y + + I G S + ++ EL+ E+IH S HII ++ D Sbjct: 115 IEMGVGYFSAAEGIVGDSVLHVIEDNLTAAELKHASLRHIAEESIHMDSLLHIIGSLNID 174 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 V +Q++ I+ + EL + ++ K+K Sbjct: 175 LDEVTAKFSDIPSVQRKNAFITRHMPEL------------------KMGIDLTQTANKQK 216 Query: 194 LYLCLMSVN-ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + + +E +FY FA + + M G ++ + RDE+ H+ +++L Sbjct: 217 FAKAIFGITQVMEGTQFYALFAMILSLHRQNKMTGIGQMFQYTLRDESNHIELGRYILTQ 276 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 L + D E + E + + + EK++ + + G+ + YVEY Sbjct: 277 LIAENPD----IWTPEFRAELVEFMREGVELEKEFVRDCLPEDGV-GMTQADFLTYVEYN 331 Query: 313 TNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + R+ + L ++NP W++ + + E V+ Y DDL Sbjct: 332 ADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEK-NFFETRVTEYQTSGSLKNTAEDDL 389 >UniRef50_Q7Y4S0 NrdB aerobic NDP reductase, small subunit n=17 Tax=root RepID=Q7Y4S0_BPR69 Length = 390 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 178/387 (45%), Positives = 242/387 (62%), Gaps = 15/387 (3%) Query: 3 YTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 T F+ + D L EPMFFG + +ARYD Q++ +FE+LI + LSFFWRPEEV++ D Sbjct: 2 STVFNTQQVDVLNEPMFFGSGLGLARYDIQRHKVFEELI-EILSFFWRPEEVNLMLDSAQ 60 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 + LP+ ++ I +NLKYQ+LLDSIQGR+P+ L+ LIS P L+TWV TW FSETIHSRS Sbjct: 61 FNKLPQFQQDICTNNLKYQSLLDSIQGRAPSAVLMALISDPSLDTWVATWTFSETIHSRS 120 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 YTHI+RN+ DPS VFD+IV +E I KRAE I YYD+++ T W E G Sbjct: 121 YTHIMRNLYTDPSKVFDEIVLDEAIMKRAESIGKYYDDVLVKTRNWENAKEVYECSIGSC 180 Query: 183 VTVS-----------LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER-ELMEGNAK 230 R+L K LYLCL +NALEAIRFYVSFAC+F F + E+MEGNAK Sbjct: 181 QQNDIEMYEEIMFNAKRDLMKSLYLCLHVINALEAIRFYVSFACTFNFHKNMEIMEGNAK 240 Query: 231 IIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADY 290 I++ IARDE LHL + ++ + ++ + + K+WA + Sbjct: 241 IMKFIARDEQLHLRVLSTLSVNFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKYKEWAAH 300 Query: 291 LFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ--TRSNPIPWINTWLVSDNVQVA 348 LF+DG+ G+N +C +V+Y+T RM+ GL P +P PWI +L SD VQ A Sbjct: 301 LFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLNSDLVQAA 360 Query: 349 PQEVEVSSYLVGQIDSEVDTDDLSNFQ 375 PQEVE+SSYLV QID++VD + +++++ Sbjct: 361 PQEVEISSYLVAQIDNDVDQNVINSYK 387 >UniRef50_Q2S729 Ribonucleotide reductase, beta subunit n=11 Tax=Proteobacteria RepID=Q2S729_HAHCH Length = 405 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 70/348 (20%), Positives = 138/348 (39%), Gaps = 27/348 (7%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHI 73 + + G ++ + KY + W P ++++S+D DY L EKH+ Sbjct: 80 DKRVVNG-MTDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKHV 138 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 + + L Y T D + R+ +A++ +S PEL+ + + E++H+ +Y H I I D Sbjct: 139 YENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIETIGLD 198 Query: 134 PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 S +++ I ++ + + L+ + +L+ Sbjct: 199 QSEIYNRYRVTPAIYRKIKMGNERISALLRPDINLR----------------NRDDLETF 242 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLL 253 + + E FY F+ FA R LM+G + ++ I RDE +H ++ + Sbjct: 243 VMAYIFFAGIFEGCWFYNGFSPIFALQRRGLMKGTGEQLQYIMRDEVMHCAFGIRVVKQI 302 Query: 254 RSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYIT 313 E + L+ +A E +A +L ++ ++G + + +I Sbjct: 303 IKE-------EGVTLDPKAIKTLWEEAEAAETGYAHFLLKE-PILGYTAEDHIEQFRFIA 354 Query: 314 NIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 N R + + LD PF N +PW++ + E V+ Y G Sbjct: 355 NRRAKQLKLDEPFPGAGNALPWLDEQASMRKEK-NFFETRVTEYQTGA 401 >UniRef50_B3CU68 Ribonucleoside-diphosphate reductase beta chain n=68 Tax=Alphaproteobacteria RepID=B3CU68_ORITI Length = 359 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 116/341 (34%), Gaps = 35/341 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSI 87 Y Y K Q W PEEV ++ D D++ L EKH+ ++ T D Sbjct: 25 YKPFSYPWAYKAWHTQQKIHWLPEEVPLADDIKDWKYNLTPGEKHLLTQIFRFFTQADIE 84 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + E++ + ++ ETIH +Y+H++ + P + + + + Sbjct: 85 VNNCYMKHYARVFQPTEVQMMLSAFSNMETIHIAAYSHLLDT-IGMPETEYQAFMKYKAM 143 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + + + + ++ ++ + E + Sbjct: 144 KDKYDYMQRF----------------------------NVDNKEEIATTLAVFGAFTEGV 175 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + SFA F M+G +II RDE LH + + E Sbjct: 176 QLFASFAILLNFPRYNKMKGMGQIITWSVRDETLHTNSIITLFKTFIQEYPEV----WTE 231 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 + K Y+ E + D F G + GL + +Y+ YI + R+ +GL + Sbjct: 232 QLKSRIYEACCTIIHFEDAFIDLAFEVGGVEGLEARDVKKYIRYIADRRLLQLGLKENYL 291 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+ W++ L E V+ Y D Sbjct: 292 IEQNPLTWLDQILN-GVEHTNFFENRVTEYTRSATTGSWDE 331 >UniRef50_B7XP84 Ribonucleoside-diphosphate reductase small chain n=8 Tax=Fungi/Metazoa group RepID=B7XP84_ENTBH Length = 336 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 113/325 (34%), Gaps = 48/325 (14%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHI 73 EP+ + Q Y + + S FW EEVD++ D + L +E+ Sbjct: 24 GYEPLLDEAKKRYVIFPIQ-YPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFF 82 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND 133 L + D I + + I E + + E IHS Y+ +I ++ D Sbjct: 83 IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142 Query: 134 PSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 +F+ I I+K+A + Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIAS------------------------------ 172 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 ++ +E I F SFA F +R LM G LI+RDE LH + Sbjct: 173 DTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLH 232 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + + D+ +A E+++ S+IG+N ++CQY+E Sbjct: 233 KYINNKCT-------------VIEDIVREAVAIEQEFLSESLP-VSLIGMNCKLMCQYIE 278 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPW 335 ++ + + A+G + ++ I W Sbjct: 279 FVADRLLFALGERKIYTFLTHSISW 303 >UniRef50_P42492 Ribonucleoside-diphosphate reductase small chain n=7 Tax=African swine fever virus RepID=RIR2_ASFB7 Length = 334 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 133/361 (36%), Gaps = 46/361 (12%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 E + + Q + +K S W +EVD+ +D D++A+P+ ++ + Sbjct: 9 EELLIENSQRFTIFPIQ-HPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYK 67 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 135 L + + D I + + I + E+ + A E +HS +Y+ ++ ++ D Sbjct: 68 QILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEK 127 Query: 136 V---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +F I + I+K A+ + + D + Sbjct: 128 EQQRIFSGIEKHPIIKKMAQWVRQWMD-----------------------------PDRN 158 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L L+ A+E I F F E+ +M G I+RDE +H + +++ Sbjct: 159 TLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNEFISRDEGVHCSFACFLISN 218 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD--GSMIGLNKDILCQYVE 310 + ++ + + +A + ++ +Y F G + G +K++L QY+ Sbjct: 219 YVYNIPEEKI----------IHKILKEAVELVDEFINYAFDKARGRVPGFSKEMLFQYIR 268 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 Y T+ + ++ NP P + + +++ + E+ + Y D Sbjct: 269 YFTDNLCFMMQCKSIYKV-GNPFPQMTKFFLNEVEKTNFFELRPTQYQNCVKDDAFAFKL 327 Query: 371 L 371 Sbjct: 328 F 328 >UniRef50_B8QU02 Putative ribonucleoside diphosphate reductase beta chain n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QU02_9CAUD Length = 365 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 102/372 (27%), Positives = 180/372 (48%), Gaps = 18/372 (4%) Query: 1 MAYTTFSQTKNDQL--KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSR 58 M+ T F+ + L P+F GQP+ + + Y L ++Q + W +EV++ Sbjct: 1 MSSTVFNHKNDAYLTASYPLFMGQPLAMYDSMNKIYPELFDLYKQQKAQDWSEDEVNLEN 60 Query: 59 DRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETI 118 RID+Q + E + I NL +Q DS R+ L P IS E V E + Sbjct: 61 SRIDFQTAAKSEIEVCIENLLWQWEADSRVSRNIITLLAPFISNNEFAAMVTKQTEIENL 120 Query: 119 HSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTV 178 H+ +Y+ I+R ++DP+ + ++ N+ + R+ I EL + + L Sbjct: 121 HALTYSEIVRQCISDPTEMIKRVMDNQAVLDRSSTIDDVMAELEILGAKKRL-------- 172 Query: 179 NGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARD 238 + +++ L ++S+ ALE + F SFAC+FA A+R L G A++++ I D Sbjct: 173 ---GYELDDEHIRQTLIKFMVSILALEGLEFIASFACTFALAQRGLFMGVAQLVQKIMLD 229 Query: 239 EALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SM 297 E LH L++L DP + + CK + + + + E +WADY+F +G S+ Sbjct: 230 EILHSKMDFAALDILLK---DPVWFQSYQNCKGDVQRILDEVMENESNWADYIFSEGRSV 286 Query: 298 IGLNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 +GLN +L ++V Y + LD + NP+P+++ W+ D+ Q A QE + S Sbjct: 287 VGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNIDSQQNANQEQDNSQ 346 Query: 357 YLVGQIDSEVDT 368 YL+ + ++ + Sbjct: 347 YLLNTMVNDDED 358 >UniRef50_C6D5U5 Ribonucleoside-diphosphate reductase n=14 Tax=Bacteria RepID=C6D5U5_PAESJ Length = 318 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 145/351 (41%), Gaps = 40/351 (11%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 + +++ D ++ + FW EE+ +S D++D+ + + E+ ++ + L TL Sbjct: 1 MKAVNWNRPDDDFTLTFWQQNVMQFWTDEEIPLSDDKMDWMEMSDTERTVYKNVLGGLTL 60 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDI 141 LD+IQG +L + + + + + E IH++SY+ I + + + +F + Sbjct: 61 LDTIQGGVGMPKILEHVDGLQRKAVLAFMSMMEQIHAKSYSSIFTTLASTEEIDAIFQWV 120 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 TNEQ+QK+A +SS+Y E K++LY + + Sbjct: 121 ETNEQLQKKATLVSSWYQ---------------------------GIETKQQLYKAMAAS 153 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F A + M + +II LI RDE++H + L + E Sbjct: 154 VFLESYLFYSGFFYPLYLAGQGKMTSSGEIIDLILRDESIHGLYVGVLAQELFNQFTPEE 213 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 + K+E + L + E + D L+ + ++ + YV Y N + +G Sbjct: 214 ----QAQLKEEVFALLNTLYENEVVYTDNLYSPIGL----QEDVKAYVRYNANKALMNLG 265 Query: 322 LDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + F NPI + + + Q + + Y+ ++ +D Sbjct: 266 FEPYFPEEPVNPIVF--NGISTHTKQHDFFSKKGNGYVRTVHIEQLRDEDF 314 >UniRef50_Q197B2 Probable ribonucleoside-diphosphate reductase small subunit 048L n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR2_IIV3 Length = 376 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 121/341 (35%), Gaps = 18/341 (5%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 + +Y + W +E+++ D D+ L E EK + L++ T D Sbjct: 53 FKPFEYPGCYDKWDTHEHAHWSFKELNMQDDVHDWHNRLSEAEKTFLVQILRFFTQGDVD 112 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 V L L PE+ + ++ E +H SY+H+I + N P V + + + + + Sbjct: 113 VA-VGYVQYLQLFQQPEVRMMLFSFGAREAMHIASYSHLISTL-NLPDVTYQEFLKYKAM 170 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + E + + + L++ + +E + Sbjct: 171 KDKHEFVFN-----------SRFKSTTVGRFFNYLLFGYDTHLEEIAVKIALFSAFIEGV 219 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + SF F LM+ +II+ DE H + + L Sbjct: 220 QLFSSFIMLLNFTRHGLMKKMGQIIQWSIADETHHTNSMMELFSTLVVENK---SHIRLG 276 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 + D + Q E + D F G M L D + Y+ YITN R+Q +G + Sbjct: 277 VLEARVRDTARKIVQLEDGFIDLAFSMGEMRQLTADDVKSYIRYITNRRLQTMGYLPLYS 336 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 NP+PW+ L + + E + + Y + + Sbjct: 337 VVENPLPWVEDLLNAPS-HTNFFENKPTEYAKASLTGDWPW 376 >UniRef50_A7C3B1 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C3B1_9GAMM Length = 374 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 138/358 (38%), Gaps = 28/358 (7%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--L 66 + + G+ +V + KY + FW P E+ + D++ + L Sbjct: 35 KRPSSSDIKIIGGRGYDVRQPIPVKYTSVRERFLNARKNFWIPNEIPMGEDKLQWNTGLL 94 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 E E +F SN+ Y T D++ + + A+L I+ E+ + E+ H SY I Sbjct: 95 TEAEMWLFKSNISYLTASDNLVPDNLDNAILKHITANEMRQYFRHQIMEESNHIESYLFI 154 Query: 127 IRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 + + D +F+ + ++ T+ V Sbjct: 155 LESFGLDEKGQGQIFNLYQEVPALTEKLNW-----------------NLTFTNNVVNSEA 197 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 E + L L+S E + F + F+ FA A + + A+ I RDE LH Sbjct: 198 PRGTLEANRALLEDLISYYIFEYLFFPLGFSQIFALARKGKLRNTAQQYSYIWRDENLHS 257 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 + ++ + ++ E+ + ++ + +A + E D+A +G ++GL Sbjct: 258 SNGLWLIKQIIQ--ENHELWDST--MQERSRAIVSEAVKLETDYAHASMPEGGIVGLPVK 313 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ ++ + + +G+ F+ R +P+PWI+ + ++ V E V Y G Sbjct: 314 TYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEYELNHE--VNFFEGRVREYQTGS 369 >UniRef50_Q2RUE9 Ribonucleoside-diphosphate reductase n=18 Tax=cellular organisms RepID=Q2RUE9_RHORT Length = 358 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 125/355 (35%), Gaps = 48/355 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDS 86 Y+ ++Y + +KQ W EEV + D D+ + + + E+++ ++ T D Sbjct: 26 YNVERYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWASDRVSDQERNLLTQIFRFFTQSDV 85 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 + +P+ E++ + + ETIH +Y ++ + P F Sbjct: 86 EVSDNYLKRYMPIFQPLEIQMMMAAFTNMETIHIDAYALLLTTL-GMPRTEFSAFRDYAA 144 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 ++ +A+ + ++ + S M E Sbjct: 145 MRDKADYMHTFGVGTMADVSRTL----------------------------AMFGAFTEG 176 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + SFA F M+G +I+ RDE+LH G + + + E + Sbjct: 177 MALFASFAMLLNFPRHNKMKGMGQIVTWSVRDESLHCQGIIRLFHEW-----NRETGALT 231 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + + D+ E+ + D F G++ G+ + + YV Y+ + R+ + L + + Sbjct: 232 KPVRDDILDVATTMVGLEEKFVDLAFELGAIEGMRAEDIKSYVRYVADWRLTQLKLPILY 291 Query: 327 Q-----------TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 R +P+PW+ L E + Y D D Sbjct: 292 GHFRETEAGYEQLRPHPLPWLVEILN-GVEHANFFEQRSTEYSKAATQGAWDGPD 345 >UniRef50_B0RGP8 Ribonucleoside-diphosphate reductase beta subunit n=9 Tax=Bacteria RepID=B0RGP8_CLAMS Length = 331 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 140/346 (40%), Gaps = 25/346 (7%) Query: 17 PMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFIS 76 + Y L ++ ++ W P E+ + D D++ + + E+H Sbjct: 3 KILGTGIQEGLLLKPVNYQWAMDLYDQAVANTWFPNEIQLGEDIADFKKMTDEERHAITF 62 Query: 77 NLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 + Y + + ++ + P I+ PE ++ + E H S+ +++ D Sbjct: 63 LMSYFNPNELLVNKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETFPIDREA 122 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 ++ V + ++ E + + E +T+ ++ E KK Sbjct: 123 AYNSHVDIPSMARKEEFEVKFIKRMTE-----------------QTLDITTTEGKKDFVR 165 Query: 197 CLMSV-NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRS 255 L++ LE I FY F S +F +R L+ ++ I RDE+LHL +++ + Sbjct: 166 NLVAYNVILEGIWFYSGFMVSLSFRQRNLLRNFGSLMDWIVRDESLHLKFGINLILTVLE 225 Query: 256 GADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNI 315 D + EE E + + A + E+ + L +G ++GLN + + QYV+Y+ + Sbjct: 226 ENPDLQT----EEFAAEIKQMILDAVEMEEQYNRDLLPNG-ILGLNANYINQYVKYLADR 280 Query: 316 RMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 R++ +G + ++ SNP W+ T V E +SY Sbjct: 281 RLEELGFEAEYKV-SNPAKWMAT-ANDTLQLVNFFESTNTSYESNA 324 >UniRef50_A0EZ20 Ribonucleotide reductase small subunit n=3 Tax=Alphabaculovirus RepID=A0EZ20_9ABAC Length = 341 Score = 241 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 123/340 (36%), Gaps = 22/340 (6%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQG 89 + ++ + + W+ EE D+SRD D+ L E+ L + D+I Sbjct: 13 PIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASADTIVN 72 Query: 90 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQ 146 + + + E + + E +HS Y+ ++ + + + + + Sbjct: 73 INLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAFDRIDC 132 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 I+K+A+ + + W + + KL +++ +E Sbjct: 133 IKKKAQWALKWTES------KWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFAIVEG 186 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 I F SFA F + LM G LI+RDE LH N + Sbjct: 187 IFFSGSFAAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYYNNYIPINE-------- 238 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + Q+ +F++A EK++ ++G+N +C+Y+E++ + + + F Sbjct: 239 KLSPQQILSMFIEAVDIEKEFFTTALP-CYLLGINATEMCKYIEFVADRLLVELRQPKHF 297 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 T NP ++ +S + E V Y +V Sbjct: 298 NT-PNPFNFMTN--ISLEGKTNFFERRVGEYKRFGAGQDV 334 >UniRef50_Q8QYZ8 Ribonucleoside-diphosphate reductase beta subunit n=7 Tax=Ranavirus RepID=Q8QYZ8_RTRV Length = 387 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 122/349 (34%), Gaps = 40/349 (11%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA--LPEHEKHIFISNLKYQTLLDS 86 + +Y E + K W E+++ D D+++ + EK L+ T LD Sbjct: 73 FKPFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEKAFVSCVLRLFTQLDV 132 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 G L + E+ + ++A E IH ++Y+ + + P + + Sbjct: 133 EVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTL-GMPDCEYQAFADYVE 191 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEA 206 + + + + L L+ E Sbjct: 192 MTDKLDFMREM-----------------------------DCSTLPGLARSLLRAVLNEG 222 Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + + +F F M+G K++ RDE +H+ G + L S +I Sbjct: 223 VSLFAAFVMLLTFQRSGKMKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDII 282 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRD-GSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 E K++ + A+ E+ + D F++ G + L + YV Y+ N+R +GL Sbjct: 283 ELFKED----AERVAELEEAFVDLAFQECGPVCELEPKQVKDYVLYVINLRAANMGLPKL 338 Query: 326 FQ--TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + + PIPW+ WL+ E V+ Y G + + L Sbjct: 339 IERAPEACPIPWV-KWLIDGADLTNFFENHVTEYETGGLTGSWSYEPLD 386 >UniRef50_A7KUZ8 Nrd beta subunit n=2 Tax=root RepID=A7KUZ8_9CAUD Length = 352 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 74/365 (20%), Positives = 149/365 (40%), Gaps = 36/365 (9%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 + + + G+ + ++ + +I+ + + + FWRP E+ + D + + Sbjct: 17 LLEPSHPNRGTKIVGGECSGLLNWND-EDEIWYDISQTLEANFWRPVEIKMKEDEKMWDS 75 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L E+ F+ LDS+Q ++ ++ + L A E H+ SY++ Sbjct: 76 LTPIEQDTFLRVGTALACLDSLQVKAILE-VIRFTTNSALANISAFIAQQEATHTTSYSY 134 Query: 126 IIRNIVNDP--SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTV 183 I ++V P + F++ + + + KR + + Y++ E S Sbjct: 135 ITSSLVRLPVQNQYFNETMKHPVLAKRNKLVLDVYEDFAENPSL---------------- 178 Query: 184 TVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHL 243 + L+ L+ LE I FY FA + A ++ M ++ +I I RDE H Sbjct: 179 --------QNLFRMLVQSINLEGIYFYSGFAFFYWLASQQKMMKSSTMISYIQRDEMQHA 230 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 ++ L + + +E Q D +A EK+WA + D + GL+ + Sbjct: 231 YFIGLLIRRLLTENPE----LNTQENAQYIVDSLKEAVATEKEWAGEILAD--IEGLDLE 284 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLV--SDNVQVAPQEVEVSSYLVGQ 361 Y+EY+ N R++ +G+D ++ R NP+PWI + ++ + E + Y Sbjct: 285 EFDHYIEYLANKRVRQLGMDNIYEERGNPMPWIQVFSDEMMEHTKTDQFENKSRDYSGAT 344 Query: 362 IDSEV 366 + Sbjct: 345 KKNNF 349 >UniRef50_Q6QGJ3 Putative aerobic ribonucleoside diphosphate reductase, small subunit n=2 Tax=Siphoviridae RepID=Q6QGJ3_BPT5 Length = 381 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 117/377 (31%), Positives = 204/377 (54%), Gaps = 11/377 (2%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 TT D + +F G + +A Y + + E+L S FW E+ + D+ + Sbjct: 2 TTLLNLNWDHTNKDLFLGDSLGIADYVRVAHPELERLALLARSQFWTETEISLEADKKQW 61 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 LP + I + NL +QT DS R+P A++PL+S PELE ++ W++ E +HSR+Y Sbjct: 62 PNLPREIQEITLLNLAWQTQTDSFISRAPEAAIMPLVSRPELEGMLKQWSYFEDLHSRAY 121 Query: 124 THIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLG--EGTHTVNGK 181 ++IIRN++ DP+ D + N++ R +DEL ++ Y+ + G +T Sbjct: 122 SNIIRNVLTDPAEFIDSVTKNQEAFARIADSVELFDELYQLGQYFIAVRDHRGDNTYPET 181 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 RE + KL ++ LEA++FY SFAC+FA AE ++++G AK ++LIA+DEAL Sbjct: 182 EFPEVKRETQAKLLDAYFAIYGLEAMQFYASFACTFALAENDILQGIAKNLQLIAKDEAL 241 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H ++ ++ ++ D ++ +E + ++ + E +W ++F+ S+IGLN Sbjct: 242 HTQMSKAIIQIMFQQFDK----DLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGLN 297 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVE-VSSY 357 ++L +Y+ ++ +G++ P NPIPWI WL + ++Q APQE++ ++Y Sbjct: 298 AELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDTTSLQPAPQEIQIGAAY 357 Query: 358 LVGQIDSEVDTDDLSNF 374 VGQ+ E TD L + Sbjct: 358 RVGQVT-ETSTDTLKDL 373 >UniRef50_A2PYM8 Ribonucleoside-diphosphate reductase beta subunit n=4 Tax=Myoviridae RepID=A2PYM8_9CAUD Length = 348 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 150/373 (40%), Gaps = 44/373 (11%) Query: 5 TFSQTKNDQ-LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 F+ + +D K +F G P N+ KY L + + W P+ D++ D +Y Sbjct: 8 IFNPSGDDSPQKRRLFGGNPTNIINLKDVKYKWASHLFTEMRANIWIPQATDLTPDINNY 67 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 +P + + F L Y T LDS+Q R L+P+I+ PE+ + E +HS+SY Sbjct: 68 VTMPPNMRRAFDGMLSYLTFLDSLQTRVL-PLLMPVITAPEVSICMGEQLSQEQVHSQSY 126 Query: 124 THIIRNIVND--PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 +II ++ +++ + + KR E I + YD I + Sbjct: 127 AYIIETVIPTDKRDYIYELWREDPVLLKRCEYIQNLYDRYIHEMT--------------- 171 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + + ++S LE I F+ F +A A M A II+LI RDE Sbjct: 172 ---------MENYTISMVSDFLLEGIYFFPGFRLFYAIANERYMSATADIIKLIERDEQT 222 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 HL +++ + E DLF +AA+ E +W ++ + G+N Sbjct: 223 HLKLISNIIRTGLAEGTLMWD-------TDEIIDLFRKAAEYEIEWGLHI--GLGVNGIN 273 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRS---NPIPWINTWL----VSDNVQVAPQEVEV 354 + QY +Y+ NIR +A+GL F+ R NP + + + E V Sbjct: 274 ATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGEDSITRDNFFESGV 333 Query: 355 SSYLVGQIDSEVD 367 ++ D Sbjct: 334 IYRNPAKVVDGWD 346 >UniRef50_D1YE85 Ribonucleoside-diphosphate reductase, beta subunit n=3 Tax=Propionibacterineae RepID=D1YE85_PROAC Length = 328 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 132/336 (39%), Gaps = 25/336 (7%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 Y L + ++ W P E+ + D D+ + E H + Y + Sbjct: 11 LLLKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNEL 70 Query: 87 IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQ 146 + ++ + P ++ E ++ + E H ++ +++ D + + Sbjct: 71 LVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVPS 130 Query: 147 IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV-NALE 205 + ++ ++ + E +T+ ++ E K+ L++ LE Sbjct: 131 MARKEAFEVAFIKRMTE-----------------QTLDITTVEGKQDFVRNLIAYNIILE 173 Query: 206 AIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 I FY F + +F +R L+ +I + RDE+LHL +++ + + Sbjct: 174 GIWFYSGFMVALSFRQRNLLRNFGSLIDWVVRDESLHLKFGMNLILTVLEENPE----IA 229 Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 +E E +D+ VQ + E+ + + G ++G+N D + YV+Y+ + R++ +G + Sbjct: 230 TDEFAAEIHDMIVQGVEMEEQYNRDMLPRG-ILGMNADYVNDYVKYLADRRLEELGFEPE 288 Query: 326 FQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 ++ NP W+ T V E +SY V Sbjct: 289 YRVV-NPAKWMAT-ANDTLQVVNFFEATNTSYEVNA 322 >UniRef50_C9XQ14 Ribonucleoside-diphosphate reductase beta chain n=8 Tax=Bacteria RepID=C9XQ14_CLODC Length = 323 Score = 236 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 147/349 (42%), Gaps = 40/349 (11%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TL Sbjct: 9 HNAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTL 68 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND--PSVVFDDI 141 LD+ QG + +++ L + + + E IH++SY+ I ++++ +F+ I Sbjct: 69 LDTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWI 128 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 T +Q++A+ + + Y+ ++ LYL +++ Sbjct: 129 ETEPTLQRKADLVLAQYE---------------------------NTTNQEGLYLSMVTS 161 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F + + M + +II LI RDE+LH + + D + Sbjct: 162 VFLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLAQEIYDSFDKMD 221 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 + +++ Y + + E ++ + ++R+ + + + +++Y N ++ +G Sbjct: 222 ----KKMLEEKMYSILYSLMENEIEYTNVIYRESGL----EKEVVNFLKYNANRALENLG 273 Query: 322 LDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 + + + NPI + L ++ + + Y G + D D Sbjct: 274 FEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQKGVYEELEDED 320 >UniRef50_Q7T6Y9 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR2_MIMIV Length = 417 Score = 231 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 72/371 (19%), Positives = 139/371 (37%), Gaps = 52/371 (14%) Query: 10 KNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPE 68 + +KEP+ + + KY + Q+ +W EEVD+++D D+ L + Sbjct: 93 NDVIMKEPILSLKSEQYTVHP-IKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSD 151 Query: 69 HEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 +++ + L + D I + L+ ++ I E E E H Y+ ++ Sbjct: 152 DDRNFIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLT 211 Query: 129 NIVND---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 V D + + + I T I+K+A+ + + Sbjct: 212 TFVKDDALRNKLINSIKTMPSIKKKADWCNKWIKS------------------------- 246 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAER--ELMEGNAKIIRLIARDEALHL 243 K L++ + +E + F SFA F R +M G + IARDE H+ Sbjct: 247 -----DKTYAHKLVAFSIVEGVFFSGSFASIFWLKTREMHVMPGLIISNQFIARDENKHV 301 Query: 244 TGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD 303 M +LL + + + +I +E + + + ++G+N + Sbjct: 302 ELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFINDSL------------PCKLLGMNSE 349 Query: 304 ILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQID 363 ++ QY++Y+ + + +G F NP ++ V V+ E +Y ID Sbjct: 350 LMSQYIKYVADRLLVDLGYRKKFNVD-NPFEYMKKIDVF--VKANFFEKRNDAYSNANID 406 Query: 364 SEVDTDDLSNF 374 +E L NF Sbjct: 407 NEKKIVFLENF 417 >UniRef50_UPI0001AF06E3 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E3 Length = 309 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 69/333 (20%), Positives = 139/333 (41%), Gaps = 34/333 (10%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGR 90 K+ + ++++ + W P V+++ D Y L ++ +F L + + LD IQ Sbjct: 5 PMKHTWAKGILDRMENNTWFPHVVNMADDVASYNRLNAADRFMFDKALAFLSNLDGIQFN 64 Query: 91 SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKR 150 + N + ++ PE+ + A+ E +H +SY II + DP V+ + + ++ Sbjct: 65 NINQNIAKHVTSPEVSMCLSRQAWEEALHVKSYATIIETVSLDPMSVYMTFERDGLLAQK 124 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + I ++ + + + L +S LE + F+ Sbjct: 125 NQFILK------------------------QSRLLGEKFSAEGFALSCVSNVLLEGVYFF 160 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARD-EALHLTGTQHMLNLLRSGADDPEMAEIAEEC 269 F + A++ M G+A +IR I RD E HL HML+ LR D + Sbjct: 161 SGFLSFYLLADKGEMLGSADMIRYIQRDEEGTHLDLFAHMLDTLRHENKDV----FTQSF 216 Query: 270 KQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL-PFQT 328 + ++F+ +++ E W Y+ + + N + Y++++ N+R + + P+ Sbjct: 217 WNKALEVFLTSSEMEISWGKYITKGVT----NPKAIEDYIKHLANLRAEQIQAPFVPYPG 272 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ 361 NP PW+ + + + E V+ Y VG Sbjct: 273 VKNPFPWVEQFSKPNTSEKNFFETRVTDYKVGG 305 >UniRef50_P49723 Ribonucleoside-diphosphate reductase small chain 2 n=7 Tax=Saccharomycetaceae RepID=RIR4_YEAST Length = 345 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 128/372 (34%), Gaps = 54/372 (14%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 K + E + + KY +K + FW EE+++++D D+Q L Sbjct: 17 DMKEAEKDEILLMENSRRFVMFP-IKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLT 75 Query: 68 EHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + +K + L D++ + + PE +++ E I+S Y+ ++ Sbjct: 76 DDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMV 135 Query: 128 RNIVNDPSVV--FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 DP + F +I +++ +A I + Sbjct: 136 DAFFKDPKNIPLFKEIANLPEVKHKAAFIERWI--------------------------- 168 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245 L++ A E I ++A F ++++M G A R I RD + Sbjct: 169 --SNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDF 226 Query: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305 + + LR+ + + +A + EK++ G++ + Sbjct: 227 SCLLFAHLRTKPNPK-----------IIEKIITEAVEIEKEYYSNSLP-VEKFGMDLKSI 274 Query: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQ---- 361 Y+E++ + +Q G + + NP ++ V+ + E +VS Y Sbjct: 275 HTYIEFVADGLLQGFGNEKYYNAV-NPFEFME--DVATAGKTTFFEKKVSDYQKASDMSK 331 Query: 362 ---IDSEVDTDD 370 E++ DD Sbjct: 332 SATPSKEINFDD 343 >UniRef50_Q91FE8 Probable ribonucleoside-diphosphate reductase small subunit 376L n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR2_IIV6 Length = 360 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 122/361 (33%), Gaps = 37/361 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 Y Y F +K W P EV + D D++ L ++++ + ++ T D Sbjct: 10 YKPFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVD 69 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + LP +PE+ + +A E +H +Y++++ + P + + + E++ Sbjct: 70 VASAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLETL-GMPEATYKEFLMYEEM 128 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + + I + D H + ++ + + + E + Sbjct: 129 KDKQDYIKKFSDS--------------RHILGKGEENLTTEDKEHIAAGIALFSGFTEGM 174 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + +FA F M+G +I+ DE H G + + + Sbjct: 175 QLFSTFAMLLIFPLNGFMKGMGQIVTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPS 234 Query: 268 ECKQECYDLFVQAAQQEKDWADYLF-----------------RDGSMIGLNKDILCQYVE 310 ++ Y + + E+ + D +F + GL L Y++ Sbjct: 235 VLQETVYKIAKEMVGLEEAFIDLVFKKYKDEPINDDNDLETKDNKDFFGLTPQRLKAYIK 294 Query: 311 YITNIRMQAVGLDLPFQTRS---NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367 YI + R+ +G F NP+P + +++ E + Y Sbjct: 295 YIADRRLNLMGYKSIFNLEPYPTNPLPELE-IMINAPTHTNFFENRSTDYANVSTKGTWS 353 Query: 368 T 368 Sbjct: 354 E 354 >UniRef50_P50621 Ribonucleoside-diphosphate reductase subunit beta n=111 Tax=root RepID=RIR2_BACSU Length = 329 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 144/349 (41%), Gaps = 39/349 (11%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 + A + + + D + + + FW PEE+ ++ D + ++ L ++E+ ++ L TLL Sbjct: 6 DAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLL 65 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSET-IHSRSYTHIIRNIVNDP--SVVFDDI 141 D+ QG + + + + + + A E +H++SY++I + + VF+ + Sbjct: 66 DTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWV 125 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 N+ +QK+A+ I Y + ++ + L+ +++ Sbjct: 126 KQNKYLQKKAQMIVGLYKAI-------------------------QKDDEISLFKAMVAS 160 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ FY F F + + + +II LI RDEA+H + + + + Sbjct: 161 VYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIY----NKQ 216 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 E E ++ DL Q + E ++ + L+ + + +++ Y N + +G Sbjct: 217 TEEKKAELREFAIDLLNQLYENELEYTEDLYDQVGL----SHDVKKFIRYNANKALMNLG 272 Query: 322 LDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 D F+ NPI + L + ++ + Y ++ D D Sbjct: 273 FDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKKATVEPLKDDD 319 >UniRef50_UPI00019243CE PREDICTED: similar to ribonucleoside-diphosphate reductase small chain n=2 Tax=Hydra magnipapillata RepID=UPI00019243CE Length = 363 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 69/381 (18%), Positives = 139/381 (36%), Gaps = 55/381 (14%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + Y + K D +E + V + K+ + L +KQ +W EE+D S DR Sbjct: 25 LEYDANDEKKKDSEEEILNKDLSRLVVKPINSKHKVIWDLYKKQKDAYWTAEEIDFSNDR 84 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 D+ + ++ +H L + DSI + L I++ E E E HS Sbjct: 85 HDFLKVDKNIQHFIKRILAFFAGADSIVNINIKKKLSK-ITVKEAEIAYGFQQMMEDTHS 143 Query: 121 RSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 Y ++ I+ DP + + T I++ + + + Sbjct: 144 EVYADMLIKIITDPVERDELINAFKTVASIKRMIQWAQRWINS----------------- 186 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAE---RELMEGNAKIIRL 234 K+++ ++ E + F +FA + + ++M+G + L Sbjct: 187 -------------KRRIGYSIVVFCIFEGLMFSGAFAGIYWLKKILGEDIMKGLIQSNNL 233 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 IA+DE +H + + E+ E+ +E + C A Sbjct: 234 IAKDEGMHTIFGCVIYTFIIYRLSFEEICELMKEAVEICKSFTKDAIC------------ 281 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR-SNPIPWINTWLVSDNVQVAPQEVE 353 MIG+N +++ Y+EY+ + M +G + F T+ + +++T + + E Sbjct: 282 VDMIGMNVELMYNYIEYVADRLMVYLGYEKIFMTKIPDQFQFMDTIGFLN--KDNFFERR 339 Query: 354 VSSYLVGQID---SEVDTDDL 371 + Y D ++ + L Sbjct: 340 ATEYQKAYNDRNRADWNFKLL 360 >UniRef50_C5H7Q1 Ribonucleoside triphosphate reductase, beta chain n=4 Tax=unclassified Myoviridae RepID=C5H7Q1_9CAUD Length = 357 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 82/362 (22%), Positives = 163/362 (45%), Gaps = 10/362 (2%) Query: 13 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKH 72 + P+F G + Y +L ++Q + W +E + R+D++++P Sbjct: 2 INQHPIFLGGERKTFDSLNKHYPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSG 61 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 + + LK+Q D+ +S A P IS T + + E +H+ +Y+ I+R + Sbjct: 62 VMLEILKWQWEADTQVAKSLAFAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIK 121 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +P + D+I N +Q R + ++ +EL++ + L + K Sbjct: 122 NPETILDEINQNVAVQDRLKTVNRVLEELLDEGINYRLSYVRDSL-----LDKDPLHFHK 176 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + L +V ALE I F SFAC+FA ++ +G A+ ++ I DE LH + + Sbjct: 177 VILKGLFAVTALEGISFMASFACTFALDAQDKFQGIAQAVQKIMLDEILHTK---IDIEV 233 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLNKDILCQYVEY 311 L+ D E + ++ E + + + E+ W+ Y+F +G +++GLN +L ++V Y Sbjct: 234 LKETLRDDEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAVVGLNTKLLHEWVYY 293 Query: 312 ITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDD 370 G+ F + P+ ++ + D Q A QE + +YL+ + ++++ Sbjct: 294 NAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGAYLLNTVVDDLNSGF 353 Query: 371 LS 372 L Sbjct: 354 LE 355 >UniRef50_C8NFG6 Ribonucleoside-diphosphate reductase 2, beta subunit n=2 Tax=Granulicatella RepID=C8NFG6_9LACT Length = 346 Score = 223 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 71/348 (20%), Positives = 129/348 (37%), Gaps = 42/348 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++Q + I + EK FW + VS D D++ L EK + TLL Sbjct: 33 KAIDWNQVEDMIDKLTWEKLTEQFWLDTRIPVSNDLDDWRTLSPAEKDVVGKVFGGLTLL 92 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIV 142 D++Q + + E F E++H++SY+ I + + +F+ Sbjct: 93 DTLQSEEGASLMKDYVRTQHEEAVWNNIQFMESVHAKSYSTIFSTLHTKAEIEDIFEWTN 152 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 NE +Q +A+ I+ Y K ++ Sbjct: 153 NNEYLQFKAKKINEIYQS-------------------------------KDALKMKVAST 181 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 LE FY F + + A+II+LI RDE++H T T + + + E Sbjct: 182 MLETFLFYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYTGYKFQQGYNELSEQE- 240 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 EE K Y+L ++ Q E + ++ +G + + ++ Y N +Q +G Sbjct: 241 ---QEEMKMWVYNLCLELYQNEVKYTQSIYDQ---VGWT-EKVKVFIRYNANKALQNLGF 293 Query: 323 DLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 D F T + P + + + + YL+G +++ D D Sbjct: 294 DPLFPDTAEDVDPIVMNGISTGTSNHDFFSQVGNGYLLGSVEAMDDED 341 >UniRef50_C0QUH3 Ribonucleoside-diphosphate reductase, beta subunit n=4 Tax=Aquificales RepID=C0QUH3_PERMH Length = 329 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 74/348 (21%), Positives = 151/348 (43%), Gaps = 24/348 (6%) Query: 14 LKEPMFFGQPV---NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 +K+ F G+ N+ + +Y +F+++ KQ W PEE+++ +D +DY++L E Sbjct: 1 MKKLQFIGKTSVKDNIRLTENPRYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKSLTPTE 60 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI 130 K +F +++ Y + + P+++ P + T F E IHS + I+ Sbjct: 61 KDLFDTSVGYFASSELLVQNVLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTF 120 Query: 131 VNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLREL 190 D +++ + ++ + ++ E I D GK +L Sbjct: 121 EMDRKRIYNITLEDKLLMEKQELIIRAVD----------------RITYGKADPDTLEGK 164 Query: 191 KKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHML 250 K+ L L++ E + FY +FA FA + M+ + LI DE+LHL + Sbjct: 165 KQILTAILLNNIIQEGMFFYSAFAHFFAMKDTGKMKNVVSGVELILIDESLHLQNGIEAI 224 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 + ++PE+ + + + + + A + E ++ F ++ G++ L +Y++ Sbjct: 225 LTIVE--ENPEIVDDEK-FVENIKETIIDAVELELNYLKTKFGGTTIFGVSYKELEKYMK 281 Query: 311 YITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 YI + R++ +G D F+ NP+ ++ V EV + Y Sbjct: 282 YIADRRLEELGFDPQFKIDQNPLKFLQKEDV--KKLTNFFEVSSTEYT 327 >UniRef50_Q9CBQ2 Ribonucleoside-diphosphate reductase subunit beta n=504 Tax=root RepID=RIR2_MYCLE Length = 325 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 134/355 (37%), Gaps = 47/355 (13%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 V+ ++ + D ++ ++ FW PE+V VS D + L EK + + Sbjct: 10 DRVSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSWGTLTASEKQLTMRVFTGL 69 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN--DPSVVFD 139 TLLD+IQG V+L+P P E AF E++H++SY+ I + + + F Sbjct: 70 TLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTAEIDEAFR 129 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 N +Q++A+ + YY + + Sbjct: 130 WSEENNNLQRKAKIVMEYYRGDEPLKRK-------------------------------V 158 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE+ FY F ++ R + A +IRLI RDEA+H + DD Sbjct: 159 ASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLVLVDD 218 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 E K+ Y+L + E ++ L+ + + + +++ Y N + Sbjct: 219 AR----RAELKEYTYELLFELYDNEVEYTQDLYDRVGLT----EDVKKFLRYNANKALMN 270 Query: 320 VGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL--VGQIDSEVDTD 369 +G + F T NP ++ + + SSY+ + + D D Sbjct: 271 LGYEALFPRDETDVNP-AILSALSPNADENHDFFSGSGSSYVIGKAVVTEDEDWD 324 >UniRef50_A5VIB8 Ribonucleoside-diphosphate reductase class Ib beta subunit n=23 Tax=root RepID=A5VIB8_LACRD Length = 339 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 128/353 (36%), Gaps = 44/353 (12%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 +++ I + EK FW + V+ D D++ L + + Sbjct: 10 NQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRELDDDHQWTVGHVFGGL 69 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFD 139 TLLD++Q + AL + P + F E++H++SY+ I + + +F+ Sbjct: 70 TLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIKEIFE 129 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 T E +Q +A I++ Y + + + Sbjct: 130 WSDTEEYLQNKAVKIANMYLDPSQDPLKKK-----------------------------V 160 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE FY F + + A+II+LI RDE++H T + + + Sbjct: 161 ANVFLETFLFYSGFYTPLYYLGHNKLNNVAEIIKLILRDESVHGTYIGYKFQVGLRDRTE 220 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + ++ K Y+ + E+ + L+ +G D + ++ Y N + Sbjct: 221 KQQQDM----KDWMYNFLYELYDNEEKYTHLLYDQ---VGWT-DDVLTFIRYNANKALMN 272 Query: 320 VGLDLPFQ---TRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 +G D F + NP+ + + + + Y +G +++ D+D Sbjct: 273 LGQDPLFPDTASDVNPV--VMNGISTSTSNHDFFSQVGNGYRMGAVEAMNDSD 323 >UniRef50_Q678G9 Ribonucleotide reductase n=2 Tax=Lymphocystivirus RepID=Q678G9_9VIRU Length = 374 Score = 221 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 131/355 (36%), Gaps = 42/355 (11%) Query: 14 LKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--ALPEHEK 71 LK +F Y Y +L + W +E+ ++ D D++ L + EK Sbjct: 60 LKRRLFEYNAS----YKPFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEK 115 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131 L+ T LD G+ + +P+ E+ + ++A E H ++Y + + Sbjct: 116 KFITQILRLFTQLDVSVGQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDTLG 175 Query: 132 NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELK 191 P + + +Q+ + + +S + I Sbjct: 176 L-PESDYSAFLKYKQMTDKTDFMSDMRTDTIG---------------------------- 206 Query: 192 KKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLN 251 + L+ E + + +F F +M+G K++ RDE +H+ G + Sbjct: 207 -NVAFSLVKAVYNEGVSLFAAFVMLLNFQRFGVMKGMGKVVEWSIRDENVHVEGLCKLFK 265 Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + S + ++ + L + + E + D +F + + L + + YV+Y Sbjct: 266 TIVSEYP----FILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKNLKRVDVINYVKY 321 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 I R +GL + NPI W+ +WL+S E V+ Y VG ++ + Sbjct: 322 ILQRRTVQLGLSNKTDLQ-NPILWV-SWLISGRDVTNFFENRVTEYDVGGLEGDW 374 >UniRef50_UPI0001976997 ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=UPI0001976997 Length = 347 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 78/372 (20%), Positives = 162/372 (43%), Gaps = 39/372 (10%) Query: 5 TFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F++ ++ + F + +D ++ +LI++ FW P+EV +S+D++ + Sbjct: 10 VFNENLPNKGER--MFDDVSGILFWDDIINQVYYELIKEMREVFWIPDEVSMSKDKVQWA 67 Query: 65 A-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + E E+ +F++ + +LDSI + I ++ + A ETIH+ SY Sbjct: 68 TEMNEMEQELFLNAIGILAVLDSIAT-YFDNVAAYYIRDSAIKALMAFVAAMETIHNESY 126 Query: 124 THIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 T+I+ ++ + VF+ NE + +R + + +DE I+ + Sbjct: 127 TYILSSVSSKAVSLDVFERPKKNEFMIRRNKLMMDLFDEFIQNPT--------------- 171 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 + L++++ LE + F F + F M G +I+ I RDE Sbjct: 172 ---------PETFAKGLVAMSGLEGLCFVNGFTPFYHFNRNGKMFGTGTVIQYIQRDEMK 222 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H ++ + + + EE + YD F + Q E+++ + L+++ ++ Sbjct: 223 HSYFQTILVRDILTQYPE----LNTEEFSEFVYDFFTELVQLEREFCEDLYKNTP--DID 276 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTW--LVSDNVQVAPQEVEVSSYLV 359 + + +Y+ Y N+ + +GLD F + NP+PWI + +N + E + +Y Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336 Query: 360 GQIDSEVDTDDL 371 + + D DDL Sbjct: 337 AN-EQKNDWDDL 347 >UniRef50_C9DFZ8 Bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ8_9CAUD Length = 346 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 125/359 (34%), Gaps = 47/359 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP-EHEKHIFISNLKYQTLLDSI 87 Y Y F L+ K W +E ++ D D++ + E+ L T D + Sbjct: 17 YKPFLYQEFYDLMTKHEDAHWVKQEAELGDDVNDWRNRSSDDERSFIKEILTVFTQGDVV 76 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + +P E+ W+ A E IH +Y P +F +++ Sbjct: 77 VADNYKSIFIPAFKNNEVSNWLVGVAAREVIHQDAYAMANETFGL-PDSMFGRFREYQEM 135 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 ++R + +++ YD + + L + L+ E + Sbjct: 136 RERNDLMATQYD----------------------------PSMVEGLAMGLVHTTFNEGV 167 Query: 208 RFYVSFACSFAFAE---------RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD 258 +FA F R +G KI + RDE +H+ G+ + + Sbjct: 168 CLMGAFANLLQFNRFDVPGFNGYRGRYKGLTKINKWSLRDEGIHVEGSSLLYRKVMGEHP 227 Query: 259 DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQ 318 + +E K++ YDL E + D F+ + + KD YV Y+ N R+ Sbjct: 228 ----WLMTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLT-MTKDESKAYVRYMMNRRLL 282 Query: 319 AVGLDLPFQTRSNPIPWINTWLVSDNVQ--VAPQEVEVSSYL-VGQIDSEVDTDDLSNF 374 +G F+ + P PWI L + E V +Y G + E+D ++ Sbjct: 283 QLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQASGALVGELDWSKVNQL 341 >UniRef50_B3RGP5 Ribonucleoside diphosphate reductase beta chain n=1 Tax=Escherichia phage rv5 RepID=B3RGP5_9CAUD Length = 362 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 93/372 (25%), Positives = 174/372 (46%), Gaps = 17/372 (4%) Query: 5 TFSQTK--NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 F+ + P+F GQ + + +KY +L +KQ W +EVD+S+ D Sbjct: 3 VFNAENTAHKTGDYPLFLGQQMGMYDSINKKYPQLFELYKKQKEQDWAEDEVDLSQSISD 62 Query: 63 YQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122 + + + + L +Q DS+ RS P I+ EL T + + E +H+ + Sbjct: 63 FVTCSKSTYDVMVQTLMWQWEADSVAARSIICLFSPFITNSELFTLLMKQSEIEVLHALT 122 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 Y+ I+R + + + ++I N+ + R+ I Y EL + + + L Sbjct: 123 YSEIVRQCLPNAREIIEEIQENQNVLSRSGVIVKYMQELEVIGAKYRLDPSSVKEDI--- 179 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 ++K + L ++ ALE+I F SFAC+FA AE+ + A++++ I DE LH Sbjct: 180 -------VRKCILRALFALLALESIEFIASFACTFAVAEQGIFVQVAQLVQKIMLDEMLH 232 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMIGLN 301 G ++++L + DP + E K E ++ + +E W+DY+F +G ++IGLN Sbjct: 233 SKGDFAIIDILLN---DPAWEKSFLEIKGELKEILDEVRTKEYGWSDYIFSEGRAIIGLN 289 Query: 302 KDILCQYVEYITNIRMQAVGLDLPF-QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG 360 +L ++V+Y + G+D F +P+P++ W+ Q A QE+ + Y V Sbjct: 290 SPLLKEWVDYNCSPIYDYYGIDKDFVPPTKDPLPFMQVWMKPSLQQTANQEMSNTDYRVN 349 Query: 361 QIDSEVDTDDLS 372 ++ + + Sbjct: 350 TTVNDAEEEIWE 361 >UniRef50_B1HSG7 Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bacillaceae RepID=B1HSG7_LYSSC Length = 318 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 135/350 (38%), Gaps = 41/350 (11%) Query: 26 VARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLD 85 +++ ++ + ++Q W PEE+ VS+D +++ + + TLLD Sbjct: 4 AVNWNKATSELAQIFWDQQWKQIWFPEEIAVSKDIQQWKSF--EHQDTYKKVFAGLTLLD 61 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIVT 143 ++Q + + + + + E IH++SY++I + + +F+ + Sbjct: 62 TVQTNIGMNRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWVKK 121 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 NE +Q +A I+ Y+ + E + L+ + S Sbjct: 122 NEYLQYKANKIADIYNSIEEG-------------------------DAESLWKAMFSSVM 156 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 LE+ FY F + + +A+II LI RDE++H L + Sbjct: 157 LESFLFYSGFFYPLYLGGQGFLRNSAEIISLILRDESIHGVAVGFFAQNLYKQFSKEK-- 214 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 E + Y+L + Q E + + ++ + GL+ + + YV Y N + VG + Sbjct: 215 --QEALQLWGYELLLDLYQNEMKYTEDIYAET---GLSPE-VKAYVRYNANKALMNVGFE 268 Query: 324 LPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 F NPI + + ++ + ++Y ++ + + D + Sbjct: 269 AMFPEEEVNPI--VMNGIRNEGSTYDFFSQKGATYAKAKV-APITDDTFN 315 >UniRef50_C7NA19 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=C7NA19_LEPBD Length = 335 Score = 217 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 71/349 (20%), Positives = 134/349 (38%), Gaps = 34/349 (9%) Query: 26 VARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLD 85 ++ + D E E+ L FW E S+D + +L K ++ L TLLD Sbjct: 8 AVNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVLGGLTLLD 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS--VVFDDIVT 143 ++Q + ++ I + + + ETIH++SY+ I + + F + Sbjct: 68 TLQSHTGMPKIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWVQE 127 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 N +Q +A I +YY ++ + K+ + + L + Sbjct: 128 NPHLQYKANKIDTYYQKM-----------------------NNPEASKRDIAMALAASVY 164 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 LE FY F A + M + II+ I DE++H + L + + E A Sbjct: 165 LETYLFYSGFFLPLWLAGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKA 224 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 ++ E K+ YDL + E + D ++ D + G + +Y+ Y N + +G + Sbjct: 225 DMRAELKKLMYDL----YENETRYTDEIYGDLGLTG----NVKEYIRYNANKALMNLGFE 276 Query: 324 LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 F+ + N P + L + Q + ++Y + DD Sbjct: 277 EEFEVK-NVNPIVLNGLNVETTQHDFFSKKSTNYEKALEVVHLHDDDFK 324 >UniRef50_A6Q6V3 Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6V3_SULNB Length = 337 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 72/372 (19%), Positives = 146/372 (39%), Gaps = 44/372 (11%) Query: 6 FSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 ++ + L E ++ G P +++ KY + + + W P EV+ S ++ +++A Sbjct: 7 YNPQGEEILDEKIYGGSPTGFVDFNRSKYRWDSNIYDLMNANTWFPSEVNTSTEKKNFEA 66 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 L ++E+ I+ + DS Q L + +++ + E HS+SY Sbjct: 67 LTDNEQSIYKMTFAQLSFNDSAQ-EEYLSDFRRLANNRLVKSVISLQIMQEVNHSKSYAV 125 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV 185 ++ + VF+ + + K+ ++ + + I+ S Sbjct: 126 LLDA-CGNSEEVFNLYKYDAALNKKNLQVAEQFAKYIDGGS------------------- 165 Query: 186 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE-ALHLT 244 K+ L M+ LE I F + F+ + + + G +I+ IARDE HL Sbjct: 166 -----ADKMLLSAMASVNLEGIYFLLGFSYIYLLG--DKVPGARDMIKFIARDELNTHLP 218 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 ++ ++ + IA Y + A + E ++ YL ++G+ ++ Sbjct: 219 LFANIFKTIQKENN------IATSTIDAAYKMIQDAVKIELEYGHYLLDQFPIMGVTHEL 272 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPI--PWINTWLVSDNVQVAPQEVEVSSYLVGQI 362 + Q V N R++ +GLD F + + L + V+ E VS+Y I Sbjct: 273 MEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKSNFFESNVSNYAKSSI 332 Query: 363 DSEVDTDDLSNF 374 DL++F Sbjct: 333 -------DLNDF 337 >UniRef50_B4U9V1 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9V1_HYDS0 Length = 319 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 134/327 (40%), Gaps = 35/327 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSI 87 D Y L K + +W PEE D++ D+ ++ + L + E+H + + + + + Sbjct: 25 LDSVVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGW 84 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 G++ + I E ++ E H ++ +I+ + P V+ ++I Sbjct: 85 VGQNILE-ISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLDLKPHEVYAMHENVKEI 143 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +++A+ L E + +L+ + + LE + Sbjct: 144 KRKADFEVKRAMALCEEPTEENLIEDI-----------------------FVYYAILEGL 180 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 F+ F AF R +++ A ++R I +DE HL ++LN L + + Sbjct: 181 FFFSGFVTPLAFGRRGVLKNVAALVRWILKDETRHLAFGIYLLNELLKDKNKND------ 234 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 K + L +A E ++A + +IGL+ + YV+Y+ + RM+++G D + Sbjct: 235 -YKDKFRVLMEEAVDIETEYARVAMPE-KIIGLSFETYTSYVKYLADRRMRSLGFDAIYG 292 Query: 328 TRSNPIPWINTWLVSDNVQVAPQEVEV 354 + NP+ W+ T ++ E +V Sbjct: 293 -QKNPMKWLTTQTDLPDL-TNFFEAKV 317 >UniRef50_Q5HMW6 Ribonucleoside-diphosphate reductase 2, beta subunit n=83 Tax=root RepID=Q5HMW6_STAEQ Length = 340 Score = 216 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 140/361 (38%), Gaps = 43/361 (11%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 +D + I ++ + W EE S+D ++ L E+ ++ L T L Sbjct: 8 RATNWD-KDNSIALTYWKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKALSGLTGL 66 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVF---DDI 141 D+ QG L + E IH +SY+HI +++ + + + Sbjct: 67 DTTQGTEGMPLLAFHYPEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKEWV 126 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 N+ + K+ + I++ Y +L++ +++Y+ + S Sbjct: 127 PANKYLNKKTKLITTNYYKLLK-----------------------PNPTDREIYVAMASS 163 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 LE+ F+ F A + M + +IIR I DE +H +GT + ++ E Sbjct: 164 IFLESFLFFSGFYYPLYLAGQGKMVHSGEIIRKIILDETIHGSGTGYAAQVIFDKFSKEE 223 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG 321 +I +E +LF Q E ++A L+ + + + +Y++Y N + +G Sbjct: 224 QEDIRKEL----MELFDQLYFNEVEYAASLYDKLGLT----EDVIRYIQYNGNRALMNLG 275 Query: 322 LDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSY-----LVGQIDSEVDTDDLSNFQ 375 + F NPI + L +D V+ Y V D + D +++ +++ Sbjct: 276 WETVFNPEPFNPI--VENGLRTDTTNHDFFSVKGDGYTLALNQVPLRDKDFDFNNVISYE 333 Query: 376 L 376 L Sbjct: 334 L 334 >UniRef50_Q1IXG4 Ribonucleoside-diphosphate reductase n=2 Tax=Deinococcus RepID=Q1IXG4_DEIGD Length = 319 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 117/349 (33%), Gaps = 44/349 (12%) Query: 23 PVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQT 82 + + + + +Q + W EE+ ++ D D++AL E+ + Sbjct: 2 SKSATNWSEVGDGFTQAFYIQQQAQLWFSEEIPIASDAADWRALSPAERTCYTRVSAGLN 61 Query: 83 LLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV--NDPSVVFDD 140 +D++QG L + + + +AF E +H+RSY+ + + ++ F+ Sbjct: 62 AMDTLQGEVGMPLLAAGEDDHQRKATLAMFAFMENVHARSYSMANKTFLSASEEREAFEW 121 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 I +Q++ Y+E +++ Sbjct: 122 IEMQPHLQRKITVFRRLYEEG-------------------------------DALTRMLA 150 Query: 201 VNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 LE FY F A + M ++ LI DEALH + + + Sbjct: 151 SCLLETALFYSGFFYPLYLAGQGKMSHMGEVFTLICADEALHGSYVGLLFQERFAALPQG 210 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 E A + +Q L + + E + D ++ + + + +V Y NI + Sbjct: 211 EQAAVRARFEQ----LAREFYENECAYTDEVYAEVGL----ASEVKTFVRYNFNICCDNL 262 Query: 321 GLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEV-SSYLVGQIDSEVD 367 GL+ F NP+ +N + ++ Y + D Sbjct: 263 GLERLFPEEEVNPLV-LNGIRATGGTTHDFFSIKGAGGYAKITAEPLTD 310 >UniRef50_D0JA50 Ribonucleotide-diphosphate reductase beta subunit n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0JA50_BLASP Length = 357 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 128/350 (36%), Gaps = 36/350 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLD 85 + +Y + KQ + W E+++ D D+ + L + EK++ LK + Sbjct: 8 LNFKPFEYQWAYEYWFKQQNAHWLHTEINMQSDIYDWNKNLTDQEKNVIGDILKGFAQTE 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 + G + + IPE++ + + ETIH+ +Y+++ + D F + ++ Sbjct: 68 TEVGNYWSEMIPKWFPIPEIKMMGQAFGSFETIHAAAYSYLNDILGLD---NFHAFLEDD 124 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I + + + + ++ + A E Sbjct: 125 VIMNKLKSLMDVRNS-----------------------DHGKYNKEEIARSVALFSAAAE 161 Query: 206 AIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEI 265 ++ + SFA +F + ++G + I RDE+LH + E + Sbjct: 162 GVQLFSSFAVLLSFRKSNRLKGVGQQIIFSVRDESLHSEAGCKIFRTFCE-----ENKGL 216 Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 E ++ Y A + E + D +F + + ++ L +++ N++++ +G Sbjct: 217 KEIVERSVYHGVDLALKNEFVFIDKIFGGRDLCTIKREELKNFMKDRANMKLRELGFFDS 276 Query: 326 FQTRSNPIPWINTWL--VSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSN 373 + + +N + +S Q + + Y + + + D S+ Sbjct: 277 YHVDRRMLDNMNWFYITISGEQQTDFFDNRETGYSK--PNEDWNEDLFSS 324 >UniRef50_A1XG51 Ribonucleotide reductase beta subunit n=6 Tax=Bacteria RepID=A1XG51_BORHD Length = 321 Score = 203 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 125/355 (35%), Gaps = 42/355 (11%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ 81 Q +++ + ++ + FW EE+ +S D++ + L E+ ++ L Sbjct: 3 QNREAINWNRLNNSYTKMFWDQNIRQFWVDEEIPISDDKLVWNTLDGEERDVYEKVLGGL 62 Query: 82 TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFD 139 TLLD+ QG L I + + + E +H++SY+ I ++ ++ +F Sbjct: 63 TLLDTEQGSVGMPRLALAIDNLDYKPVLGFMGAMEHMHAKSYSSIFSSLSNIDRIDHIFG 122 Query: 140 DIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLM 199 + T Q + + I Y+ + + LY L Sbjct: 123 WVKTYRNFQDKLDLILGKYNSI---------------------------HDRMSLYKALC 155 Query: 200 SVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 + LE FY F A + M + +II LI RDE++H + + Sbjct: 156 TSVFLETFLFYSGFFYPLYLAGQGKMVNSGEIINLILRDESVHGVFVGLLAQ----EEFN 211 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQA 319 + ++E + + E + L+ + G + +V Y + + Sbjct: 212 KMTFKEQAFAQREATLILERLYYLESAYTKDLYSSIGLEG----AVDVFVRYNADKALMN 267 Query: 320 VGLDLPFQTRS---NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 +G D F R NP+ + L ++ + + Y+ + DD Sbjct: 268 LGFDSAFNIRDIDVNPL--VLNGLRTNTKTHDFFSTKGNGYIKPMRVEPLQDDDF 320 >UniRef50_Q8SCK7 PHIKZ305 n=2 Tax=phiKZ-like viruses RepID=Q8SCK7_9CAUD Length = 387 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 81/392 (20%), Positives = 158/392 (40%), Gaps = 35/392 (8%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + F+ K+D + G + Y +L ++ W E D S Sbjct: 7 LPKKIFNVAKSDYHLPEIILGDDPGLLDSIHTHYPKMWELYKRLKMLDWDELEFDFSTCL 66 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 ++++ + + I L +Q DS+ RS L P+++ + +E +H+ Sbjct: 67 VEFETCDKSTYDMMIKTLAWQWEADSVASRSIVNILSPVMTDSRVWAGYVRINDNEDVHA 126 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 +Y+ I+RN DP V+ D+I+ E+ Q+R ++ E + + L Sbjct: 127 LTYSEIVRNSFKDPKVILDEILRVEEAQERMVAVARTMGEAHDAVHAYAL---------- 176 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE- 239 + +EL K+++ +++ LE I+F SFA +FA + A ++ IA+DE Sbjct: 177 -NQVPNDQELYNKVFMFFIALYFLERIQFMASFAVTFAIGRTGAFQQIAAAVKKIAQDEF 235 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG-SMI 298 +H Q ++ L +CK + +L + + E W +YLF +G + Sbjct: 236 EIHAQYGQEVIRALL---ATERGKLAYSQCKDKIIELLWEIVKTEVTWINYLFSEGRELT 292 Query: 299 GLNKDILCQYVEYITNIRMQAV------------------GLDLPFQTRSNPIPWINTWL 340 G+N L +V + N + G D + NP+ ++ +L Sbjct: 293 GVNATKLINWVLFNANAAATFLSIENDVVEQYQVEFKESAGFDFVWP-EKNPLLYMEDYL 351 Query: 341 VSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + Q +PQE E Y+V ++ + ++ Sbjct: 352 DISSTQASPQEEEKPDYMVNVVNDVGEEEEFE 383 >UniRef50_P47471 Ribonucleoside-diphosphate reductase subunit beta n=52 Tax=Bacteria RepID=RIR2_MYCGE Length = 340 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 132/359 (36%), Gaps = 47/359 (13%) Query: 19 FFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNL 78 F G + ++ + ++ + + FW PE++ VS D ++ L + + + Sbjct: 23 FQGN-LRSVNWNLVDDEKDLEVWNRIVQNFWLPEKIPVSNDIPSWKKLSKDWQDLITKTF 81 Query: 79 KYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV-- 136 TLLD+IQ ++ + + +AF +H+RSY I + + Sbjct: 82 TGLTLLDTIQATIGDICQIDHALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSEQINA 141 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 + +V E +QKRA+ + YY + S Sbjct: 142 AHEWVVNTESLQKRAKALIPYYTGNDPLKSK----------------------------- 172 Query: 197 CLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 ++ + Y F F + R+ + + IIRLI RD+ +H + + Sbjct: 173 --VAAALMPGFLLYGGFYLPFYLSSRKQLPNTSDIIRLILRDKVIHNYYSGYKYQRKLEK 230 Query: 257 ADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIR 316 +E K ++L + + EKD+ L+ ++ D ++ Y Sbjct: 231 LP----LAKQKEMKAFVFELMYRLIELEKDYLKELYEGFGIV----DDAIKFSVYNAGKF 282 Query: 317 MQAVGLDLPF---QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 +Q +G D PF +TR P + +D SSY++G + E + DD + Sbjct: 283 LQNLGYDSPFTAAETRIKPEIFAQLSARADE-NHDFFSGNGSSYVMG-VSEETNDDDWN 339 >UniRef50_C0QY28 Ribonucleoside-diphosphate reductase, beta subunit n=2 Tax=Brachyspira RepID=C0QY28_BRAHW Length = 356 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 83/358 (23%), Positives = 153/358 (42%), Gaps = 19/358 (5%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 E +FFG + R D +++ KL E W +EVD D+ + +LPE + F Sbjct: 12 NEKIFFGDFGHYLRIDSVSHEVARKLKEASEGNTWFSKEVDYKSDKTRFSSLPEDAQRAF 71 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 N+ YQTL+DS + L +++ A E IH+ SY++ + + Sbjct: 72 KLNIAYQTLMDSGVTSGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHE 131 Query: 135 -SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKK 193 + D + +E ++ R E L G N + +L E K+ Sbjct: 132 ATDTLDLVYNDEFVKHRME-------------KEVELFGNVDELCNLENSPATLDEKKQA 178 Query: 194 LYLCLMSVNALEAIRFYVSFACSFAFAER--ELMEGNAKIIRLIARDE-ALHLTGTQHML 250 + L+ + LE+++F SF +F + G K I+LIA DE H+ ++++ Sbjct: 179 VLKLLIGIYLLESVKFPFSFLVTFTINNNYDNAIAGFTKTIKLIAHDELNTHVPTGKNVM 238 Query: 251 NLLRSGADDPEMAEIAEECKQECYDLFVQ-AAQQEKDWADYLFRDGSMIGLNKDILCQYV 309 N+LR + E + +E WA YLF + G+N + ++ Sbjct: 239 NILRKENEQGFTHLFKSGWFNETARAMAEFTVNEEIKWAKYLFDGYQVAGINSSVSEHFI 298 Query: 310 EYITNIRMQAVGLDLPFQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 +Y +R++ +G++ P+ + + I W N++ + A QE +SY G + +++ Sbjct: 299 KYWAGVRLRDLGVESPYNEKKSDVIDWFNSYRDINKQNAALQETTNTSYQKGALKNDL 356 >UniRef50_A7TFJ9 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TFJ9_VANPO Length = 351 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 118/345 (34%), Gaps = 49/345 (14%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ--A 65 + K Q E + + KY +K+ + FW EE+D S+D ++ Sbjct: 18 ELKELQKDESILTENKRRFVLFP-IKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDK 76 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 + + EK FI L D + + L PE + + + IH Y Sbjct: 77 ITKDEKEYFIRLLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGI 135 Query: 126 IIRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +I ++V D +F++I I+++ E S+++ Sbjct: 136 LIDSLVKDDEKRTSMFEEIKDLTNIKEKIEYAKSWFE----------------------- 172 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 L++ A+ I ++ +F + L+ G + + RD LH Sbjct: 173 ------NEDNLFGEKLIAEAAVLGIFSLSAYVSVLSFQKGGLIPGFVTGVDNMLRDRGLH 226 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNK 302 + M L++ D + + V A + EK + L Sbjct: 227 VDFCCLMYAHLKNQID-----------SEIVQKIIVDAVEIEKKSLLKALPIIKV-NLKI 274 Query: 303 DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQV 347 D + Q++EY+ + + A G + + NP ++ ++ N Sbjct: 275 DEMNQFIEYVADSILVAFGNEKHYNAT-NPYEFMENVVLPGNTNS 318 >UniRef50_Q7P4N2 Ribonucleoside-diphosphate reductase beta chain n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P4N2_FUSNV Length = 245 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 28/246 (11%) Query: 6 FSQTKNDQLK-EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64 F+ +D L + G N+ + +Y +L ++ FW PE+VD+++D+ DY+ Sbjct: 11 FNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKNDYE 70 Query: 65 ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYT 124 L E+ + L + LDSIQ + + ++ PE+ + F E IHS+SY Sbjct: 71 NLTVPEREAYDGILSFLIFLDSIQTNNI-PNISDHVTAPEVNLLLAIQTFQEAIHSQSYQ 129 Query: 125 HIIRNIVND--PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +II +I+ +++D ++ + +R I+ Y + I+ Sbjct: 130 YIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFID------------------- 170 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 + + +++ LE++ FY F + A R M G + IIRLI RDE H Sbjct: 171 -----EQSDENFAKVIIANYLLESLYFYNGFNFFYLLASRNKMVGTSDIIRLINRDELSH 225 Query: 243 LTGTQH 248 + + Sbjct: 226 VVLFRS 231 >UniRef50_Q20993 Putative uncharacterized protein (Fragment) n=1 Tax=Caenorhabditis elegans RepID=Q20993_CAEEL Length = 500 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 33/224 (14%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 EP+ + + + +K ++ FW EEVD+ +D ++ L E+ Sbjct: 307 EPLLAPNNNRFVVHPIV-HRDIWEFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFIS 365 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND-- 133 S L + D I + + + E + E IHS Y ++ + D Sbjct: 366 SILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDA 425 Query: 134 -PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 +++F+ I T + I+ +A+ + + Sbjct: 426 ERNILFNAITTFKFIKAKADWCLRWISDHNAP---------------------------- 457 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 L +V A+E I F SFA F +R L+ G LI+ Sbjct: 458 -FSERLAAVAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELIS 500 >UniRef50_Q4TC55 Chromosome undetermined SCAF7053, whole genome shotgun sequence. (Fragment) n=2 Tax=Euteleostomi RepID=Q4TC55_TETNG Length = 369 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 4/147 (2%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74 +EP+ P + Q Y ++ +K + FW EEVD+S+D +++L + E+ Sbjct: 1 EEPLLKENPRRFVIFPIQ-YQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFI 59 Query: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134 L + D I + + + E + E IHS Y+ +I + +P Sbjct: 60 SHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEP 119 Query: 135 SV---VFDDIVTNEQIQKRAEGISSYY 158 S +F+ I T ++K+A+ ++ Sbjct: 120 SEREYLFNAIETLPCVKKKADWALNWI 146 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 13/43 (30%), Gaps = 2/43 (4%) Query: 330 SNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 NP ++ +S + E V Y + + + Sbjct: 324 ENPFDFMEN--ISLEGKTNFFEKRVGEYQRMGVMAGAADNTFR 364 >UniRef50_C6X1E6 Ribonucleotide reductase of class Ia (Aerobic), beta subunit n=6 Tax=Bacteroidetes RepID=C6X1E6_FLAB3 Length = 324 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 137/348 (39%), Gaps = 39/348 (11%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSI 87 Y +Y + +E FW EVD + D D+Q+ L HEK+ + L ++ Sbjct: 10 YKPFEYPEIMQFVEAINKSFWVHSEVDFTADVQDFQSQLEPHEKNAVKNALLAIAQIEVS 69 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 ++ L + PEL T+A E HS +Y+ ++ + + F+ +V I Sbjct: 70 V-KTFWGNLYNHLPKPELNGLGSTFAECEFRHSEAYSRLLEVLGYN--DAFNHVVEIPAI 126 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +KR + +S+ + K+ + L+ +E + Sbjct: 127 KKRIDFLSNVLK------------------------HANSTTPKEYVSSLLLFSILIENV 162 Query: 208 RFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + FA +F + M+ + II + DE +H +++N +R D + Sbjct: 163 SLFSQFAIILSFTRFKGYMKNVSNIIAWTSVDEQIHANAGIYLINKIREEQPD----LLT 218 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + ++ Y L + + E + D++F G + ++K+ L +++Y + ++ +G+ + Sbjct: 219 DSDIEDIYTLVDHSIELEAEILDWIFEMGEIDNVSKENLLNFMKYRVDDSLKKIGMQTRY 278 Query: 327 QTRSN---PIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + P+ W + ++++ Y D + +DL Sbjct: 279 NVSGDEYRPMVWFEEEVFANSMD-DFFAKRPVDYTKH--DKSITENDL 323 >UniRef50_A7TLQ4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TLQ4_VANPO Length = 361 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 62/380 (16%), Positives = 134/380 (35%), Gaps = 67/380 (17%) Query: 7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QA 65 + + Q KEP+ + + + +K+ + FW EE+D S D I++ + Sbjct: 31 LEVEESQSKEPILMENKSRFVLMPIKFHTV-YDGYKKREALFWPAEEIDFSHDIINWGKK 89 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNV-ALLPLISIPELETWVETWAFSETIHSRSYT 124 +H+K I +L + S+ G + + IPE + + E IH Y+ Sbjct: 90 ASDHDKSIIKKSLAFLCS--SVLGSFYLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYS 147 Query: 125 HIIRNIVNDPSVV---FDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGK 181 I +V++ + F D+ + I+++ ++D+ Sbjct: 148 LAIDQLVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDK--------------------- 186 Query: 182 TVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL 241 L++ +++EAI VSF + +++++ G I+LI +D + Sbjct: 187 --------ESSLFAEKLVAFSSIEAIFSLVSFFSIMSLEKKDIIPGLISGIKLILKDHIV 238 Query: 242 HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLN 301 H + + L+ D + +A + E + + + + + Sbjct: 239 HCDFQMSIYSELKKRLDP-----------GIIERIVTEAVEIELETLEDDYFNKQLDKET 287 Query: 302 KDILCQYVEYITNIRMQAVGLDLPFQTR-----------SNPIPWINTWLVSDNVQVAPQ 350 K + +EY+ + + G F + N IP + + + + Sbjct: 288 KADIKNVIEYVGDRVLMGFGNQKHFHSANPYDNLEHECFENVIPKTESSDSQNTTKFSKT 347 Query: 351 EVEVSSYLVGQIDSEVDTDD 370 E +S E+ DD Sbjct: 348 EKIAAS--------EISFDD 359 >UniRef50_O67475 Aae nrdB intein n=2 Tax=Aquificaceae RepID=RIR2_AQUAE Length = 696 Score = 181 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 112/277 (40%), Gaps = 30/277 (10%) Query: 5 TFSQTKN-DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ-LSFFWRPEEVDVSRDRID 62 F+ + + K + G P N+ ++ KY L + + FW PEE+ + DR Sbjct: 14 IFNPQGDREASKRKIIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQ 73 Query: 63 YQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 Y+ L ++EK + L + LDS Q +I+ PE+E + F E++H+ Sbjct: 74 YETVLSDYEKRAYELVLSFLIALDSFQVDMLKE-FGRMITAPEVEMAITAQEFQESVHAY 132 Query: 122 SYTHIIRNIVN--DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 SY I+ ++V+ +++ +E++ +R + I+ Y+E I + Sbjct: 133 SYQFILESVVDPVKADEIYNYWREDERLLERNKVIAELYNEFIRKPN------------- 179 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 ++ + LE++ FY FA + + M + I+ I RDE Sbjct: 180 -----------EENFIKATIGNYILESLYFYSGFAFFYTLGRQGKMRNTVQQIKYINRDE 228 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL 276 + GT+ + + ++ + E ++ Sbjct: 229 LCFIEGTEVLTKRGFVDFRELREDDLVAQYDIETGEI 265 Score = 97.5 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 H+T ++++N LR + E ++ + F A +E W Y+ ++ ++G Sbjct: 575 NCHVTLFRNIINTLRKENPE----LFTPEIEKWIVEYFKYAVNEEIKWGQYVTQN-QILG 629 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQ-TRSNPIPWINTWLVSDNVQVAPQEVEVSSYL 358 +N ++ +Y++Y+ N+R+ +G D + NP+ WI+ + +N + + + +Y Sbjct: 630 INDVLIERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYS 689 Query: 359 VGQ 361 Sbjct: 690 KAN 692 >UniRef50_Q19CR4 Putative uncharacterized protein n=3 Tax=unclassified T4-like viruses RepID=Q19CR4_9CAUD Length = 332 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 114/338 (33%), Gaps = 41/338 (12%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQG 89 KY F KL ++Q+ FW +E V D D + L E + + LK T+ + G Sbjct: 18 IIKYPEFGKLADEQMHAFWPWDEPVVDNDIQDLRTKLTPGELNGITTVLKLFTIYERKVG 77 Query: 90 RSPNVALLPL-ISIPELETWVETWAFSETI-HSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + PE+ ++ E H+ Y + + D + +E++ Sbjct: 78 EDYWSGRIAHTFGRPEINRMATLFSAVEGNSHAPFYNKVNEVLYLDDEAFYTSWKESEEL 137 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 +R + + ++ + + +E Sbjct: 138 SRRIQFVGKSVNDPDD-------------------------------AKSFAAFTFIEGA 166 Query: 208 RFYVSFACSFAFA----ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 Y SFA F ++LM + + L DE H G + L + Sbjct: 167 VLYSSFAFLKHFQAQECGKDLMRNICRGVDLSVADEHHHSIGGAMLFQTLCREMKEKYGE 226 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLD 323 ++ + K + ++ Q E D +F + + G+ D L +V+ N+ ++ +G + Sbjct: 227 DVRAKLKNDIINMARQVFDHESGIIDLVFAE-PIDGITADELRVFVKSRINLCLENLGYE 285 Query: 324 LPFQTRSNPI-PWINTWLVSDNVQVAPQEVEVSSYLVG 360 F+ +NPI W ++ S Y + Sbjct: 286 PIFEIENNPIADWF-YRTINAKKFHDFFTGSGSEYNIN 322 >UniRef50_Q6R7K3 Ribonucleoside-diphosphate reductase small chain n=1 Tax=Ostreid herpesvirus 1 RepID=RIR2_OSHV1 Length = 579 Score = 178 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 65/376 (17%), Positives = 130/376 (34%), Gaps = 66/376 (17%) Query: 15 KEPMFFGQPVNVAR---------YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA 65 P++ G + Y K S W+ E+D D ++ Sbjct: 51 DHPLYGGATDHHKDIVGKYDHALLKPAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQ 110 Query: 66 LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 + E+E+ L + + D++ +PE + +++ +E +H R Y + Sbjct: 111 ISENERDCVRKVLAFFAVGDTLVKDRIA-IFADEFPLPECKDFIDWQTVNEGVHQRVYNN 169 Query: 126 IIRNIVNDPSVVFDDIVTNEQ-----IQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 + +V D + D + + I+K+ + + + Sbjct: 170 YLDALVKDKIYLADLVNAYKDPEFAPIKKKVDWLGKIISVENDSR--------------- 214 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 ++ EAI F SFA F M I RDE Sbjct: 215 --------------GEMVVGQVCTEAIMFAASFAILLKF-RAPYMRALVLGNEFIRRDET 259 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 LH +L L+ D + +L +A + E ++A+Y+ +G + + Sbjct: 260 LHFRFYAELLRLMPDRPSD-----------ERIAELLTEATEIELEFAEYVVPEG-VKYI 307 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPF-QTRSN----PIPWINTWLVSDNVQVAPQEVEVS 355 KD L Q+V+ TN + + ++ + + N P+ ++NT + ++ E + + Sbjct: 308 TKDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNT--LESEQKINFFEGKAT 365 Query: 356 SYLVGQIDSEVDTDDL 371 Y Q VD ++L Sbjct: 366 EYNTKQYK--VDFNNL 379 >UniRef50_UPI00006DCD86 hypothetical protein CdifQ_04003426 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD86 Length = 224 Score = 177 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 29/236 (12%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 N +++++ + E+ + FW PEE+ VS+D + L EK ++ L TL Sbjct: 9 HNAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTL 68 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND--PSVVFDDI 141 LD+ QG + +++ L + + + E IH++SY+ I ++++ +F+ I Sbjct: 69 LDTKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWI 128 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 T +Q++A+ + + Y+ ++ LYL +++ Sbjct: 129 ETEPTLQRKADLVLAQYE---------------------------NTTNQEGLYLSMVTS 161 Query: 202 NALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 LE+ FY F + + M + +II LI RDE+LH + + Sbjct: 162 VFLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLAQEIYDSF 217 >UniRef50_UPI000155436B hypothetical protein ORF027 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436B Length = 322 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 125/342 (36%), Gaps = 37/342 (10%) Query: 32 QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGR 90 Y + + Q S FW +E++V +D D + + E E H I+ L+ TL + + GR Sbjct: 13 FDYPEAIQFAKVQSSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLFTLYELVAGR 72 Query: 91 SPNV-ALLPLISIPELETWVETWAFSE-TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + +L P++E T+ F E +H+ Y I ++ + + V + ++ Sbjct: 73 DYWLGRVLKTFPRPDIERMAATFGFFELNVHAPFYNKINEALMLNTDEFYLAYVNDPILK 132 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 +R E + S +E L + + +E Sbjct: 133 ERMEFVDSLVEEDDP-------------------------------LYSLGAFSMVEGAV 161 Query: 209 FYVSFACSFAF--AERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 Y SFA F + + + I RDE LH G + N L+ E I Sbjct: 162 LYSSFAFLKHFQAKGKNKLMNVVRGINFSVRDENLHCEGGAWLYNTLKQEI-KSEGGYIN 220 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 + + + A+ E D +F G M G+ + + +V+ NI + +G++ F Sbjct: 221 PNLEYDLANCAHTIAEHEFRIVDMIFEKGEMEGITAEQMKTFVKSRVNICLAQLGIEPVF 280 Query: 327 QTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDT 368 + +N + ++ + +SY + + Sbjct: 281 EVSNNIVAEWFYDGINGVMFHDFFSGIGNSYNRSWDEKGFNW 322 >UniRef50_A5FCJ5 Ribonucleotide reductase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ5_FLAJ1 Length = 324 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 127/350 (36%), Gaps = 39/350 (11%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLD 85 Y +Y + E +W EVD + D D+ L EK ++L ++ Sbjct: 8 VNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHAHLSLAEKTAVKNSLLAIAQIE 67 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 +S + PE T+A E HS +Y+ ++ + + F+ ++ Sbjct: 68 VAV-KSFWGNIYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDE--FEKLLDVP 124 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I++R + +S+ + ++ +K + ++ +E Sbjct: 125 VIRRRVDYLSNVLKD------------------------TKSQDNRKYMVSLILFSILIE 160 Query: 206 AIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 + + FA +F + M+ + II + DE +H G +++N +R D Sbjct: 161 NVSLFSQFAILLSFTRFKGYMKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPD----Y 216 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 EE + + E D D++F +G + + K L ++++ + ++ + + + Sbjct: 217 FDEETLALVRETVKDSIAVESDILDWIFEEGEIESIKKGDLVNFMKFRIDESLKQINIPV 276 Query: 325 PFQT---RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 F + W + ++++ Y D + +DL Sbjct: 277 IFDVKVEDYKALAWFEEEVFANSLD-DFFAKRPVEYTKH--DKSITANDL 323 >UniRef50_D2XAR5 Ribonucleotide reductase small chain n=1 Tax=Marseillevirus RepID=D2XAR5_9VIRU Length = 280 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 105/306 (34%), Gaps = 44/306 (14%) Query: 60 RIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLIS--IPELETWVETWAFSET 117 D+ L + EK L + D I + +S E+E + A +E Sbjct: 1 MSDWSKLTKGEKKFVKLELAFFAQFDGIVVENLVRNFQQEVSSYAKEIEWFYILQAANEL 60 Query: 118 IHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEG 174 IH+ +Y ++I N++ P D I I+ A + + D I + Sbjct: 61 IHNETYMNLIDNLLPSPKKREKALDAISNYPSIRLIANWVERWMDRRIPLPE-------- 112 Query: 175 THTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRL 234 +++ ALE + F SFA F ++G K Sbjct: 113 ----------------------RIIAFAALEGVIFTGSFAAIHYFTITNRLKGLRKANEW 150 Query: 235 IARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRD 294 I++DEALH + + + + ++ ++ A + R Sbjct: 151 ISKDEALHQRFAEAVYRYIVD-----VIKAFPRVSQERVQEILGSAIDAVSPFIHDCLR- 204 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEV 354 + ++ + + Y++ + ++G + F + S + ++ L+ + + E V Sbjct: 205 FKNVNIDAERMIGYMKNAADGLAFSLGYEKFFNSDS-SLDYM--LLIGMDNKTNFFEEVV 261 Query: 355 SSYLVG 360 + Y G Sbjct: 262 ADYAKG 267 >UniRef50_Q2XUY1 Ribonucleotide reductase beta chain n=1 Tax=Environmental halophage 1 AAJ-2005 RepID=Q2XUY1_9VIRU Length = 358 Score = 171 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 125/348 (35%), Gaps = 39/348 (11%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSI 87 +Y F ++ + +W +E + D DY+ E+ + ++ + Sbjct: 44 LKPYEYTDFLDYVDAVRNSYWVHDEFNFDGDIQDYRVNTTPAEQTTIKRTMLAIAQIE-V 102 Query: 88 QGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 Q ++ + + E+ T+A SE H +Y+H++ + + F+ I + Sbjct: 103 QVKTFWSDIYEDMPKAEVGNVGMTFAESEVRHMDAYSHLLDVLGIEDE--FEQITEVPAV 160 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 Q+R E + Y + S ++ + LM +E + Sbjct: 161 QQRIEYLDEYLE------------------------MGSSENKQESVMGILMFSTFVEHV 196 Query: 208 RFYVSFACSFAFAER-ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 + F +F + + +G A + +++E +H Q ++ +R D Sbjct: 197 SLFSQFLIMTSFDKHEKKFKGIANAVEATSKEEQIHGLFGQELVETIREENPD----LFD 252 Query: 267 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF 326 ++ E D QA + E + D++ DG + L ++ + +++ N + G+D F Sbjct: 253 DDFTDEIQDACQQAYEAESEILDWILEDGELDFLPREHIDAFLKDRFNQSLDNAGVDPVF 312 Query: 327 QTRSNPIP---WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 + + W + + + ++Y V DD+ Sbjct: 313 DPDEDVVDETRWFDE-DIMMTKENDFFSKRSTTYNKH--TQSVTADDM 357 >UniRef50_P06474 Ribonucleoside-diphosphate reductase small chain n=247 Tax=Herpesviridae RepID=RIR2_HHV1K Length = 340 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 101/336 (30%), Gaps = 46/336 (13%) Query: 35 DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 L + W E+ D D L E E + + + D + + Sbjct: 44 PDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLG- 102 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV----TNEQIQKR 150 L L ++ + E HSR Y I + ++ + V + I+ + Sbjct: 103 GLSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVAGTINHPAIRAK 162 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + + + E + + L + +E I F Sbjct: 163 VDWLEARVRECASVPEKFIL------------------------------MILIEGIFFA 192 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 SFA L+ + LI+RDEA+H T + ++ N G P Sbjct: 193 ASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPP--------P 244 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI--LCQYVEYITNIRMQAVGLDLPFQT 328 Y LF QA + E + S I + + YV + + + + + F Sbjct: 245 DRVYGLFRQAVEIEIGFIRSQAPTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSA 304 Query: 329 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDS 364 P L+S + E +SY ++ Sbjct: 305 PP-PDASFPLSLMSTDKHTNFFECRSTSYAGAVVND 339 >UniRef50_Q3IM05 Ribonucleoside-diphosphate reductase, beta subunit 1 n=23 Tax=cellular organisms RepID=Q3IM05_NATPD Length = 336 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 122/340 (35%), Gaps = 37/340 (10%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLD 85 + +Y F + + +W E + S D D++ EK + + ++ Sbjct: 20 TQLKPYEYADFLDYKDAIRNSYWVHTEFNFSGDVQDFRTNTTPAEKTVIKRTMLAIAQIE 79 Query: 86 SIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNE 145 +Q ++ + + E+ T+A SE H +Y+H++ + F+++ Sbjct: 80 -VQVKTFWADIYDEMPKTEVGNVGMTFAESEVRHMDAYSHLLDILGITED--FEEVTDVP 136 Query: 146 QIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE 205 I+ R E + Y ++ + ++ + L+ +E Sbjct: 137 AIEDRIEYLDKYLEK------------------------SESDDKQEYVMSILLFSTFVE 172 Query: 206 AIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 + + F +F + ++ +G A + +++E +H ++ +R D Sbjct: 173 HVSLFSQFLIMMSFDKYKKKFKGIANAVEATSKEEQIHGLFGVELVETIREENPD----L 228 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 E+ ++E +A + E D++F +G + L + + ++ N ++ VG++ Sbjct: 229 FDEDFEEEVQAACQRAFEAEMKILDWIFGEGELEFLPRTHVDAFLRDRFNQSLENVGVEP 288 Query: 325 PFQTRSNPIP---WINTWLVSDNVQVAPQEVEVSSYLVGQ 361 F+ + W + + ++Y Sbjct: 289 IFEPDDGLLEETRWFDE-DIMMTKDNDFFSKRSTTYNKHA 327 >UniRef50_C5M646 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M646_CANTT Length = 252 Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 5/157 (3%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-AL 66 + K + +EP+ + KY +K + FW EEVD+S+D D+ L Sbjct: 82 KLKQLEAEEPLLQENKRRYVMFP-IKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWNNKL 140 Query: 67 PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126 ++E++ L + D I G + + PE +++ E IHS Y+ + Sbjct: 141 NDNERYFVSRVLAFFAASDGIVGENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLL 200 Query: 127 IRNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDE 160 I V DP +F+ I I K+AE + + Sbjct: 201 IETYVKDPQEADFLFNAIENIPCITKKAEWAIKWIQD 237 >UniRef50_Q01038 Ribonucleoside-diphosphate reductase small chain n=21 Tax=root RepID=RIR2_SHV21 Length = 305 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 116/337 (34%), Gaps = 54/337 (16%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 F +L ++ W P +V + D L E + + + + + + + L Sbjct: 16 FLELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIEDLL 75 Query: 97 LPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND-PSVVFD---DIVTNEQIQKRAE 152 ++ + E IH + Y +I+ + + + V+ DI+ + +Q++ Sbjct: 76 SQ-FDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKLR 134 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 ++ E + L +E I F S Sbjct: 135 WLNGRVTEASDKAEKILL------------------------------FLLVEGIFFISS 164 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 F F R +M G IARDE LH + + N + ++ P + Sbjct: 165 FFSIGLFRVRGIMNGICLANDYIARDEMLHTSAAALLYNTMTKSSERPS--------EDW 216 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPF---QTR 329 Y LF +A + E + + + +N + Q+++ + ++++ L+ + Sbjct: 217 IYKLFREAVEVEFKFI--AAKGYGVSLVNVHEIRQFLQATADRILESINLNPIYGSLPPE 274 Query: 330 SNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 + P+ + S V E + S Y G + +++ Sbjct: 275 NCPLAY-----TSSTKSVNFFERDNSDYT-GTLTNDL 305 >UniRef50_D2VB17 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VB17_NAEGR Length = 330 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 111/350 (31%), Gaps = 52/350 (14%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSF-FWRPEEVD--VSRDR 60 SQ K + E + P + Q Y ++ +K+L+ W E+ D + D Sbjct: 3 ELHSQLKQLEKSEEILSENPHRFTLFPIQ-YPKLWEIYKKRLASSIWSVEQFDQIIRNDI 61 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS 120 + + L + Q + A I I E + + + IH Sbjct: 62 SKLSEICNSDHSFIKIILAFLVAN-CKQKTNLWGAFKD-IQILEAKHFHGFRLAMKNIHY 119 Query: 121 RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG 180 Y ++ + + K+++ + + Sbjct: 120 EMYCNLFEILTEETERSELIEKMINSTMKKSQYTKKWLNS-------------------- 159 Query: 181 KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA 240 L+ + +E I SF F +R LM LI RDE Sbjct: 160 ----------DNLFSERLIGLVCIEQIFLSASFFSIFWLKKRGLMSALTISNDLIFRDEE 209 Query: 241 LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL 300 H + + L+ ++ + + L +A EK++ L +I L Sbjct: 210 FHSNFLYSLYSNLKH----------SKLPQTLVHSLVKEAVDIEKEFITSL--PTELIEL 257 Query: 301 NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQ 350 +++ + QYVE +++ + + G + F T N WI L++ + Sbjct: 258 DRNSMYQYVEVVSDNILISFGYEKLFHTE-NQCSWIQDMLMNKSG---FF 303 >UniRef50_D0R5X4 Ribonucleoside-diphosphate reductase beta chain n=9 Tax=Lactobacillus RepID=D0R5X4_LACJF Length = 313 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 105/329 (31%), Gaps = 42/329 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++ + + + + P V + +D+ ++ LP++E+ + + + TL Sbjct: 8 KANNWNTVEEQVDHSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHSFGSLTLS 67 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNI--VNDPSVVFDDIV 142 ++Q + + E + E+I++++Y++++ ++ Sbjct: 68 STLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDAYEWAN 127 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 N +QK+ + +++ Y + + Sbjct: 128 QNPYLQKKMKFLNTVYQSGNAIQKKA-------------------------------AHV 156 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 L ++ SF + + A++I+ R L+ T E Sbjct: 157 FLSTGLYHSSFFGPLYLFGQHKLPRTAELIKYALRITTLNGIYTGIKFRRDFFKLSKKEQ 216 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 ++ YDL E L+++ + +D + Y+ Y N + +G Sbjct: 217 NKVH----DWVYDLCDNLYDNELSHIKLLYQNTDL----EDKVEHYIHYTLNKALMNLGQ 268 Query: 323 DLPFQTRSNPI-PWINTWLVSDNVQVAPQ 350 + + + P + T L+ + Sbjct: 269 EPKYPENVETLDPILTTGLMESAMIKDFF 297 >UniRef50_Q040X9 Ribonucleoside-diphosphate reductase class Ib beta subunit n=7 Tax=Lactobacillus RepID=Q040X9_LACGA Length = 320 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 102/339 (30%), Gaps = 43/339 (12%) Query: 16 EPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFI 75 M + ++ + + + + P V + DR ++ LP+ E+ + + Sbjct: 5 RKMNKKSYYKTSNWNAVEDQVDRSAWARLNDIVYEPRRVPIHEDRDEFSHLPKTEQTMLL 64 Query: 76 SNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVND-- 133 + L ++Q + + E + E+I++++Y H + Sbjct: 65 HSFGSLALSSTLQMKVSLSKIKQDAENSEEAAVYNALQYLESINNKAYGHALTEFSTSNE 124 Query: 134 -PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 F+ N +QK+ +++ Y + Sbjct: 125 QRDEAFNWANQNPYLQKKMRLLNTVYQSDNAIQKKA------------------------ 160 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 + + ++ SF + + A++I+ R L+ T Sbjct: 161 -------AHVFISTGLYHSSFFGPLYLFGQHKLPRTAELIKYALRITTLNGIYTGIKFRR 213 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYI 312 E I + YDL + E + L+ D + +D + Y+ Y Sbjct: 214 DFFNLSKEEQKNIHK----WVYDLCDRLYANELNHIHLLYEDTGL----EDKVEHYIHYT 265 Query: 313 TNIRMQAVGLDLPFQTRSNPI-PWINTWLVSDNVQVAPQ 350 N + +G + + + P + T L+ + Sbjct: 266 LNKALMNLGQEPKYPENVETLDPTLTTGLMESAMIEDFF 304 >UniRef50_D1H3S0 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1H3S0_VITVI Length = 269 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 67/181 (37%), Gaps = 15/181 (8%) Query: 187 LRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGT 246 L++ +E I F SF F ++ LM G LI+R E LH Sbjct: 91 PLCSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFA 150 Query: 247 QHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILC 306 + +LL+ Q+ + + +A + E + ++IG+ ++ Sbjct: 151 CLLYSLLQKQLP-----------WQKVHHIVHEAMEIETQFICEALP-CALIGMKATLMS 198 Query: 307 QYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 366 Y++++ + + A+G + + NP W+ + + + Y I S + Sbjct: 199 HYIKFVVDRLLVALGYERKYNVE-NPFDWME--FIFLQGNANFFQRRMGDYQKASIMSSL 255 Query: 367 D 367 D Sbjct: 256 D 256 >UniRef50_B3L3V1 Ribonucleotide reductase small subunit,putative n=10 Tax=Plasmodium RepID=B3L3V1_PLAKH Length = 335 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 118/345 (34%), Gaps = 52/345 (15%) Query: 11 NDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE 70 + Q + + + KY F ++ S FW E+ + +D+ +++ ++ Sbjct: 14 DAQNNDDILKENQFRWVMFP-IKYKTFWSYYKEVESLFWTAEDYNFDKDKKFLESIDKNM 72 Query: 71 KHIFISNLKYQTLLDSIQGRS---PNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127 + + +L D +L +I IPE + E IH Y I Sbjct: 73 LVKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIF 132 Query: 128 RNIVNDPSV---VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVT 184 + D + + ++ + + K+ + ++ ++ I + L+ NG Sbjct: 133 ETYIPDAKQKRTIINKVIQLDSVLKKQKWLTELFETNIPFYNKLVLIYISKVLFNGTLNI 192 Query: 185 VSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLT 244 + + + CL +V+ I RDE LH Sbjct: 193 LIGYCKENSILPCLCNVH------------------------------EKIHRDEYLHGD 222 Query: 245 GTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI 304 + N L + + D F A + E +A + D S++ + K+ Sbjct: 223 FSVMCCNHLNNKLK-----------YERLLDYFKMAVKLEYQFAIEML-DLSVLKIKKEQ 270 Query: 305 LCQYVEYITNIRMQAVGLDLPFQTRSNPIPW--INTWLVSDNVQV 347 + ++EY+ + + + F ++ P W N +VS+N + Sbjct: 271 VKSFLEYLADTMLVNLKHPKYFNSKY-PFTWPEFNKIVVSENQKT 314 >UniRef50_Q745Z4 Ribonucleoside-diphosphate reductase beta chain n=3 Tax=Thermus RepID=Q745Z4_THET2 Length = 324 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 103/335 (30%), Gaps = 35/335 (10%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQ 88 Y +Y + + +W E D D+ E E+ + L ++ Sbjct: 10 YRPYEYPELLRFRDAIRHSYWVHTEFSFQSDLQDHALADEKERSLVERALLAIAQVELAV 69 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + + PE+ T+A SE H+ +Y H Sbjct: 70 -KLFWARVYDRFPKPEIAEVGLTFAESEVRHANAYAH----------------------- 105 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 + + + L + + ++L++ + E + Sbjct: 106 --LLELLGLEEAFGQALEGASALRDRAQALGEALRRAQGKDLREYALALFLFSAFTEHVS 163 Query: 209 FYVSFACSFAFAERE-LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + F A R +G + I +++E +H +L LLR+ + + E Sbjct: 164 LFSQFYVLMALNRRGNRYKGISNAIEATSKEENVHGLFGVELLRLLRTEHPE----ALGE 219 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 ++E L + E+ D+LF G + ++++ N + GL PF Sbjct: 220 GFQEEALRLAQGLFRAEEALLDWLFSAGEPALVGHRETLEFLKGRYNQVLALHGLPPPFP 279 Query: 328 TRSNPI---PWINTWLVSDNVQVAPQEVEVSSYLV 359 + W L++D +V +Y Sbjct: 280 VDEKALRDTEWFTLELLAD-KEVDFFNKRSVAYAR 313 >UniRef50_A3FPS5 Ribonucleotide reductase small subunit n=3 Tax=Cryptosporidium RepID=A3FPS5_CRYPV Length = 339 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 104/339 (30%), Gaps = 26/339 (7%) Query: 8 QTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALP 67 + Q E + P + KY L +K FW E + D+ + Sbjct: 7 ELLEQQKNESILLDNPFRWVLFP-IKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMD 65 Query: 68 EHEKHIFISNLKYQTLLDS--IQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTH 125 E + +D+ + LL + +PE + E I Y Sbjct: 66 EKLLDYIEMAFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENI----YKE 121 Query: 126 IIRNIVNDPSVVFDDIVTNEQIQKR------AEGISSYYDELIEMTSYWHLLGEGTHTVN 179 + N V + I ++++K+ ++ Y+ +E + Sbjct: 122 LFMNYVEMIRKNKEKIERTDEVEKKDENNLNSKISKEEYEYNLEKKLNELEDFTKMKELV 181 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 G +K +Y ++ +I +E EL + I RDE Sbjct: 182 GNFYDEDTLFSEKLIYYVIIKKIFSSSIHLLRLSFSMRNISESELPTQLCDGLDRIRRDE 241 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIG 299 + + +++ + + +L QA EK++ + D ++ Sbjct: 242 QYQVEFCLSIAKSMKTKPSN-----------DQVVNLLEQAIMLEKNFIFSIV-DPQVLQ 289 Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINT 338 + ++ + ++ + + + + F SNP I Sbjct: 290 IEREDIVAFLLFNADEILVDLKYPRQFNV-SNPFINIMN 327 >UniRef50_C8WQL9 Ribonucleotide reductase n=3 Tax=Bacillales RepID=C8WQL9_ALIAD Length = 317 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 101/310 (32%), Gaps = 37/310 (11%) Query: 22 QPVNVARYDQQKYDIFEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKY 80 Q + R + + +L K W P ++D ++D+ D+Q + E E+ + + Sbjct: 11 QTTSEKRLNHSILPM--RLYHKAKKLGTWDPRDIDFTKDKEDWQGMNEAERRVILRLCSL 68 Query: 81 QTLLDSIQGRSPNVALLPLISI--PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVF 138 + ++ + E E ++ T+ F E H+ + + + + S + Sbjct: 69 FVAGEEAVTLDLLPLIMAVAREGRLEEEMYLTTFLFEEAKHTEVFRRFLDEVAGETSDL- 127 Query: 139 DDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCL 198 + + +Y+ L + V + + + Sbjct: 128 -------SVFHKDHYRKIFYEYLPQ----------------AMGRLVHDPSPEAQAEASV 164 Query: 199 MSVNALEAIRFYVSFACSF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257 +E + + + A + + G + IRL+ RDE+ H+ ++L+ L S Sbjct: 165 TYNMVVEGVLAETGYYAFYTALQKENKLPGLIQAIRLLQRDESRHIGYGTYLLSRLISEN 224 Query: 258 D------DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI-GLNKDILCQYVE 310 + + + DL + +E + GLN D Y + Sbjct: 225 AHIWDVVNRRINLLLPHAIGVVQDLNAELDTEEAQKLAEELGITDVPFGLNPDEFVAYAQ 284 Query: 311 YITNIRMQAV 320 R+ + Sbjct: 285 KQFATRLGVL 294 >UniRef50_A8PTX7 Ribonucleotide reductase 2, putative n=1 Tax=Brugia malayi RepID=A8PTX7_BRUMA Length = 288 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 1/133 (0%) Query: 4 TTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY 63 T + + + E + P + K+ +K L+ FW +EVD+S+D D+ Sbjct: 34 TATTTVRYESNGEILLAENPNRFVIFP-IKFHDIWDFYKKALASFWTVDEVDLSKDYRDW 92 Query: 64 QALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSY 123 + L + E+H L + D I + + +PE + E IHS Y Sbjct: 93 ENLNDGERHFISRVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENIHSEMY 152 Query: 124 THIIRNIVNDPSV 136 + +I + D Sbjct: 153 SKMIDTYIRDQKQ 165 Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 28/232 (12%), Positives = 72/232 (31%), Gaps = 19/232 (8%) Query: 150 RAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRF 209 + I +Y + + + + + + R ++ + + + Sbjct: 62 KFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISRVLAFFAASDGIVNENL 121 Query: 210 YVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA------ 263 F+ E G +I E +H M++ + Sbjct: 122 VNRFSQEVQVPEARFFYGFQIMI------ENIHSEMYSKMIDTYIRDQKQKKFRKFCVTL 175 Query: 264 ---EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 EI ++ +F ++++ +IG+N ++CQY+EY+ + + + Sbjct: 176 CFLEINLSNYKKFTSMFNACIDAKQEYLTEALP-VDLIGINCKLMCQYIEYVADHLLTEL 234 Query: 321 GLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + + NP ++ + + E VS Y + S + + Sbjct: 235 HCAKIYHSD-NPFDFMERISI--EAKTNFFEKRVSEYQKAGVLSSEEGKSFN 283 >UniRef50_A5TYV8 R2-like ligand binding oxidase n=16 Tax=Actinomycetales RepID=RIR2H_MYCTA Length = 314 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 104/314 (33%), Gaps = 37/314 (11%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 KL + FW P ++D +RDR D++ L + E+ + + Sbjct: 22 KLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSA 81 Query: 99 LISIPEL--ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISS 156 + + L E ++ +AF E H++ + + + IS Sbjct: 82 MRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVG----------------------ISE 119 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 ++ + + ++ + + + + +E + + Sbjct: 120 DLHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQ-VRASVTYNHIVEGMLALTGYYAW 178 Query: 217 FAFA-ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYD 275 ER ++ G +++R I DE H+ R A D + E E Sbjct: 179 HKICVERAILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDANWTVFETRMNELIP 236 Query: 276 LFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW 335 L ++ E+ +A L+ D L+KD +++Y T+ M+ G R P+ Sbjct: 237 LALRLI--EEGFA--LYGDQPPFDLSKDD---FLQYSTDKGMRRFG--TISNARGRPVAE 287 Query: 336 INTWLVSDNVQVAP 349 I+ ++ Sbjct: 288 IDVDYSPAQLEDTF 301 >UniRef50_D2S0R0 Ribonucleotide reductase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0R0_9EURY Length = 296 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 91/287 (31%), Gaps = 22/287 (7%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 ++L+ + + W P +DV D+ L E L + L Sbjct: 28 KRLVRSAIEYHWDPAAIDVRADQEAVSELSRVEFTRLRGLLAQFGAGERAVTTDLAP-LA 86 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ + + ++ T + E H+ + + ++ I T + R Sbjct: 87 VVLDGSDEQRYIATQLYDEARHTELFDRYWKRVIRPEEESRGLIPTEP-MADR--WSHDD 143 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 Y EL + TS T + L + L + +E Y Sbjct: 144 YRELFDRTSNAMARLLERDTSETRARAFCHYHLTVEGILAQTAYRWVETR--YSG----- 196 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 + G R + RDE H++ + L DPE + Sbjct: 197 ELEAVPELPGLVNGFRYLRRDEGRHVSFGVTKVRKLVDKGVDPET----------IVETI 246 Query: 278 VQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 + + D + RDGS+ G +++ + ++ + R++ VG+ Sbjct: 247 DELVPLVETTIDQMVRDGSI-GADRNGILNRIDTARDRRLEQVGVVP 292 >UniRef50_Q4UJ43 Ribonucleoside reductase, putative n=2 Tax=Theileria RepID=Q4UJ43_THEAN Length = 332 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 59/372 (15%), Positives = 127/372 (34%), Gaps = 49/372 (13%) Query: 1 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR 60 + YT+ + +ND E + + ++D F L ++ + FW E+ + D Sbjct: 6 LPYTSILKVQND---EILLKENHNRWVMFP-IEHDTFWILYKEVENNFWAAEDFIFTDDI 61 Query: 61 IDYQALPEHEKHIFISNLKYQTLLDSIQ---GRSPNVALLPLISIPELETWVETWAFSET 117 LP+ + ++ L + LD+ + LL + I E + E Sbjct: 62 KLLYQLPKPIFNTLLNLLSFHINLDNKLICRPVDITLDLLSEVQIAEARAFYGFQLTDEN 121 Query: 118 IHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHT 177 IH+ + + + +F+ + + +SSY G Sbjct: 122 IHTETISSMF--------QLFNQQLDTNIVSSNTLFLSSY--------------GMDKII 159 Query: 178 VNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF-AFAERELMEGNAKIIRLIA 236 + K+ L L +M + FY S + +L+ I Sbjct: 160 WLYNECENNKCFFKRVLLLVIMK------LLFYCSINILRDYLLKEKLLPTFITAFDSIT 213 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 D +H LL++ + + E ++ QA + E + + Sbjct: 214 NDRIIHTRFAHCTFRLLQN-----------KMLESEVLEIIKQALKLEYQFI-LQYFTIQ 261 Query: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356 L+ +++ Y+E+I N + G + + + I W+N ++ N+Q +++ + Sbjct: 262 FFNLSTNVIKSYLEWIGNNILLVCGYKTLYTSEFD-IDWLNHPIIDLNIQKQTNKIQKHN 320 Query: 357 YLVGQIDSEVDT 368 + I + D Sbjct: 321 ENLNDIKFDEDF 332 >UniRef50_Q0S392 R2-like ligand binding oxidase n=7 Tax=Actinomycetales RepID=RIR2H_RHOSR Length = 324 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 102/321 (31%), Gaps = 38/321 (11%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 +L K + FW P ++D SRD D++ L ++ + + + Sbjct: 33 RLFTKGNAKFWNPTDLDFSRDAEDWEGLNSEQQRNSTYLVAQFIAGEEAVTEDIQPFMKA 92 Query: 99 LISIPEL--ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISS 156 + + E ++ + F E H++ + + + + + + + Sbjct: 93 MAAEGRFGDEMYLTQFCFEEAKHTQVFRLWMDAVGLTRDL-------HPFVAENPYYRQL 145 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 +Y+EL V + ++ + + +E + Sbjct: 146 FYEELPGSLK----------------VLETDPSPVNQVRASVTYNHVIEGSLALTGYYAW 189 Query: 217 FAF-AERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYD 275 R ++ G +++R I DE H+ R A D + +E E Sbjct: 190 QKVCTTRGILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDSNWGVVQERMAELMP 247 Query: 276 LFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW 335 L + W + F + GL+ +++ Y + + +G R P+ Sbjct: 248 LALGMID----WVNKQF-EVQPYGLDDQ---EFIAYAADRAQRRLG--AIESARGRPVEE 297 Query: 336 INTWLVSDNVQVAPQEVEVSS 356 I+ + ++ E + + Sbjct: 298 IDLDYSPEALEEKFGEEDAKA 318 >UniRef50_A5UUQ7 Ribonucleotide reductase n=5 Tax=Chloroflexaceae RepID=A5UUQ7_ROSS1 Length = 297 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 92/303 (30%), Gaps = 41/303 (13%) Query: 23 PVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQT 82 R D +FEK + W P ++D S+D D+Q L E+ + + Sbjct: 9 TSRGLRRDTVPMRLFEKAKRLGV---WNPSDIDFSQDVRDWQTLTADERDLVLRLTSLFQ 65 Query: 83 LLDSIQGRSPNVALLPLISIP--ELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDD 140 + + + + E E ++ ++ + E H+ + + + Sbjct: 66 AGEEAVTLDLLPLVATIAAEGRIEEELFLTSFLWEEAKHTDFFNRFLTEVTG-------- 117 Query: 141 IVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMS 200 +L + + + + L Sbjct: 118 ----------------VTGDLSHYHTSNYRALIHEALPAAMGRLRDDPSPEAQAIASLTY 161 Query: 201 VNALEAIRFYVSF-ACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADD 259 +E + + A R+LM G K I L+ +DE+ H+ ++L+ L + + Sbjct: 162 NMIVEGVLAETGYHAYFTMLERRDLMPGTRKGIGLLKQDESRHIAYGVYLLSRLIN--AE 219 Query: 260 PEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI--GLNKDILCQYVEYITNIRM 317 P + ++ + + D F ++ GL+ D + R+ Sbjct: 220 PRLWDV-------IVERMNELVVYAMGVIDDAFACYEVVPFGLSHDDFMHFAMGQFQRRL 272 Query: 318 QAV 320 + Sbjct: 273 DRI 275 >UniRef50_A7IYE3 Putative ribonucleotide reductase n=1 Tax=Corynebacterium phage P1201 RepID=A7IYE3_9CAUD Length = 237 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 92/265 (34%), Gaps = 34/265 (12%) Query: 109 VETWAFSETIHSRSYTHIIRNIVNDPSV--VFDDIVTNEQIQKRAEGISSYYDELIEMTS 166 ++ F E +H++SY+ + + + F + N+ Q + YD Sbjct: 1 MKQIGFMEEVHAKSYSSVFSTLFGSEDIDGAFAWVENNKATQVKKLVFDEAYDISDYNDR 60 Query: 167 YWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELME 226 G S LE+ FY F FA + + Sbjct: 61 RVEYYGAIIR----------------------ASSVLLESFLFYTGFYLPLHFASQGKLT 98 Query: 227 GNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKD 286 A +IRLI RDE +H + + + + K+ +L + E Sbjct: 99 NTADLIRLIMRDEGVHGYYLGYKFQ----KVMEGALPYERDAVKERVTNLACRLFVNEIP 154 Query: 287 WADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTR-SNPIPWINTWLVSDNV 345 + ++ +GL+ + ++ Y N MQ +GL+ F + P I + L D+ Sbjct: 155 LIEEIY---EPLGLSAQ-VQTFLRYNLNKAMQNLGLENVFPAEMTRVEPRILSQLSVDSE 210 Query: 346 QV-APQEVEVSSYLVGQIDSEVDTD 369 + SSY++GQ + D D Sbjct: 211 ETHDFFSGSGSSYVIGQAEETTDDD 235 >UniRef50_A7AR36 Ribonucleoside-diphosphate reductase beta subunit, putative n=1 Tax=Babesia bovis RepID=A7AR36_BABBO Length = 329 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 96/309 (31%), Gaps = 54/309 (17%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 +Q E + + YD + ++ + FW E+ + +R Y +LP + Sbjct: 17 EQHNETLLKENANRWVMFP-IHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELR 75 Query: 72 HIFISNLKYQTLLD-SIQGR--SPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIR 128 + + + Y LD S R + + LL IPE + E IHS + + Sbjct: 76 QLVVKLISYHNRLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIMSS 135 Query: 129 NIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR 188 I + + E ++ + + V L+ Sbjct: 136 AIPGTID--------VPEADAKIEWLTRNLTS-----------------TSCFYIKVILQ 170 Query: 189 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 248 + K ++ + A + + + +A+D ++HL Sbjct: 171 CISKAIFRSAFGILA-------------DYLRNSKKLPTLLSALDTVAKDVSIHLKFAMA 217 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQY 308 L L+ ++ +L A E + + M GL++ L QY Sbjct: 218 ALEHLKLRP-----------TRETVMELLNSAYDLEMAYCRSVLPMDHM-GLSEYHLSQY 265 Query: 309 VEYITNIRM 317 ++ N + Sbjct: 266 IKNNVNQCL 274 >UniRef50_D2S309 Ribonucleotide reductase beta subunit-like protein n=3 Tax=Halobacteriaceae RepID=D2S309_9EURY Length = 302 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 91/288 (31%), Gaps = 28/288 (9%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 + + W P E+D+ DR LP+ +L + L Sbjct: 20 HRYYRNAVEKHWDPHEIDLEADREGATDLPDPAFEGLKQSLALFGAGEESVTEDLAP-LA 78 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ E + ++ T + E+ H+ + R +++ +++ +K + Sbjct: 79 VVLEDIEDQLFITTQLYEESKHTDFFDRYWREVIHAEEERRGQELSSPADEK---WFNEP 135 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFA-CS 216 YDEL E + T + L +E I + + Sbjct: 136 YDELFERNERAMVQLLEEDTPKNRAKAHCHYHLT------------IEGILAQTGYYGLT 183 Query: 217 FAFAERE----LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQE 272 A+ E+E + G + ++L+ DE H+ L L + ++ + E Sbjct: 184 LAYGEQEPDLPDLPGLVEGLKLVRSDEGRHVGFGMAQLKSLVIDGE--VDPDVLRDTVDE 241 Query: 273 CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 L + E +G G + L +Y RM+ + Sbjct: 242 LVPLVQDSLAGE---GGASTEEGP--GPSPSDLAEYAYTKHEQRMRQI 284 >UniRef50_A0QMC0 R2-like ligand binding oxidase n=10 Tax=Actinomycetales RepID=RIR2H_MYCA1 Length = 311 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 101/314 (32%), Gaps = 38/314 (12%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 KL + FW P ++D SRDR D++ L + E+ + + + Sbjct: 22 KLFAGGNAKFWNPADIDFSRDRADWERLTDDERSYATRLCAEFIAGEESVTQDIQPFMAA 81 Query: 99 LISIPEL--ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISS 156 + + L E ++ +AF E H + + + + ++ Sbjct: 82 MRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVG----------------------VTD 119 Query: 157 YYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACS 216 ++ + + +T+ + + + + +E + + Sbjct: 120 DLHHFLDDVPSYRTIFYEELPDCLNALTIDPSPAAQ-VRASVTYNHMVEGMLALTGYFGW 178 Query: 217 FAFA-ERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYD 275 ER ++ G +++R I DE H+ R A D + E E Sbjct: 179 HKICVERGILPGMQELVRRIGDDERRHMAWGT--FTCRRHVAADDANWGVFETRMNELMP 236 Query: 276 LFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPW 335 L ++ E+ +A Y + + +++ Y ++ M+ G R P+ Sbjct: 237 LGLRLI--EEGFALYDPMPFDL------SVDEFMAYASDKGMRRFG--TIASARGRPLAE 286 Query: 336 INTWLVSDNVQVAP 349 I+ ++ Sbjct: 287 IDLDYTPVQLEDTF 300 >UniRef50_B7SVC3 Rr2 n=1 Tax=Oryctes rhinoceros virus RepID=B7SVC3_9VIRU Length = 400 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 83/253 (32%), Gaps = 34/253 (13%) Query: 30 DQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE-KHIFISNLKYQTLLDSIQ 88 +K+ L K S FW E D S DR ++ + E + I + + + DSI Sbjct: 52 PARKFKDTYDLWLKHQSCFWSVHENDPSVDRDRFETMTPKEFQEILLCTVGCIAIGDSIV 111 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 L ++ EL+ E IH + Y++++ V++ Sbjct: 112 LDRIANGLKERVTSIELKAMFSDQEAREFIHKKMYSNMLD-------------VSHRANY 158 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 R+E + Y ++E + + +G + + + + E I Sbjct: 159 YRSEEFKNEYMSVLETLADKYDIGY--------------------VQVQMFFIMMCEIIL 198 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEE 268 F F A + + L+ RDE +H + ++ D + E Sbjct: 199 FTPMFQTICYAACKGYCPKLCDLNLLVMRDEYIHYENARLQSFKFKTKLDRKFARTVLAE 258 Query: 269 CKQECYDLFVQAA 281 + LF + Sbjct: 259 FSELTLQLFAKII 271 >UniRef50_A4VCA2 Putative ribonucleotide reductase subunit beta n=2 Tax=Streptococcaceae RepID=A4VCA2_9LACT Length = 317 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 98/324 (30%), Gaps = 41/324 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++ + + + E+ S FW + + D ++ L E+ L T L Sbjct: 9 RAINWNIVEDEFDNAVWERATSLFWLDTRIPIENDFTNWIKLNLEEQGQLKCLLILLTNL 68 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN--DPSVVFDDIV 142 + Q + + + F E +++++Y I+ + F+ + Sbjct: 69 STNQSIEVGEIVRNGKCSQQEVAILNNIQFIEMVNTKAYNRILLTFDKEINLEKSFEWVD 128 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 + ++ + I++ Y E L Sbjct: 129 NDSRVLEYLNDINTVYRE-------------------------------SSLIKKRFIAL 157 Query: 203 ALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM 262 +E + Y + F + ++ +I R+E+LH H + LL +D E+ Sbjct: 158 CVEGLLNYAYLSHLFELWINKEFNNLGTMLEMIIRNESLHCFYFSHKVKLLLKESDPKEV 217 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 E K Y+ + + D + +K I + N + +GL Sbjct: 218 ----ERFKAWSYETVNHFVKLGLNIIDDFYYLKE----SKKIAKNLILQEANNILMGIGL 269 Query: 323 DLPFQTRSNPIPWINTWLVSDNVQ 346 F + IN L + Sbjct: 270 KEQFGFNDEVLKGINYRLNNLRRH 293 >UniRef50_Q54E77 Ribonucleotide reductase-related n=1 Tax=Dictyostelium discoideum RepID=Q54E77_DICDI Length = 257 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 92/242 (38%), Gaps = 43/242 (17%) Query: 5 TFSQTKNDQLKEPMFFGQPVNVARY------DQQKYDIFEKLIEKQLSFFWRPEEVDVSR 58 T + K L +F + +A++ ++ K+ +K L+ W EE++ S Sbjct: 49 TITDNKIYILINSIFKDNNLKMAQFIFKNFENEISPLDIWKMYKKTLANQWVVEEIESSD 108 Query: 59 DRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSET 117 D +D++ L E+ F + L + I ++ + + IPE + + + Sbjct: 109 DGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-NRFMSKVQIPEAKCFYNYQIHIKY 167 Query: 118 IHSRSYTHIIRNIVND---PSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEG 174 +HS +Y+ +I + D +F+ I T ++K+AE + +E E Sbjct: 168 LHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKAEWALKWINESFE----------- 216 Query: 175 THTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRL 234 L+++ A E+I F SF +R LM+G L Sbjct: 217 ---------------------KRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNEL 255 Query: 235 IA 236 I Sbjct: 256 IN 257 >UniRef50_A1A6K4 At5g40942 n=2 Tax=rosids RepID=A1A6K4_ARATH Length = 231 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%) Query: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHI 73 +EP+ P + Q Y ++ +K + FW EEVD+S+D D++ L E+H Sbjct: 6 EEPILTPTPDRFCMFPIQ-YPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHF 64 Query: 74 FISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSR 121 L + D I + + + + I E + E IHS Sbjct: 65 IKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE 112 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 53/129 (41%), Gaps = 8/129 (6%) Query: 252 LLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEY 311 + E+ + + + A + E+++ +++G+N++++ QY+E+ Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALS-CALVGMNRELMSQYIEF 161 Query: 312 ITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD---- 367 + + + A+G + NP W+ L+S + E V Y + S V Sbjct: 162 VADRLLAALGCGKVYGVT-NPFDWME--LISLQGKTNFFEKRVGEYQKASVMSSVHGNAA 218 Query: 368 TDDLSNFQL 376 +D F+L Sbjct: 219 FNDDHVFKL 227 >UniRef50_C3MUE4 Ribonucleotide reductase n=11 Tax=Sulfolobus RepID=C3MUE4_SULIM Length = 308 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 106/320 (33%), Gaps = 48/320 (15%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71 ++ K F + KL + FW P +D+S+D D++ L + EK Sbjct: 6 EEYKHEYFKSIKSGGLNWSLFPM----KLYQLGKKLFWDPANIDLSKDAEDWKKLNDLEK 61 Query: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIP--ELETWVETWAFSETIHSRSYTHIIRN 129 I+ + + ++ L+ E ++E + + E+ H ++ Sbjct: 62 MFIINVGSKFAAGEEAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAF------ 115 Query: 130 IVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRE 189 FD + E + + +S Y ++ + Sbjct: 116 -----RRFFDAVNVMEDLSTYTKDLSPNYKKIFYEELPKAMWNLS-----------RDPS 159 Query: 190 LKKKLYLCLMSVNALEAIRFYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQH 248 + ++ + +E + + R+++ G AK++ LIA DE+ H+ + Sbjct: 160 PENQVRAVVTYNLIVEGVAAEGGYNIFRQITNTRKILPGLAKMVNLIATDESRHIAFGIY 219 Query: 249 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMI-------GLN 301 ++ L +E + Y + +A +F + +M L Sbjct: 220 LITRLV------------KEYGEGVYKAAMDHINYLAPYAIGIFSEPTMPQVESLPFNLT 267 Query: 302 KDILCQYVEYITNIRMQAVG 321 L Y + + N R+ A+ Sbjct: 268 NIELVDYAKKLLNTRIDAIN 287 >UniRef50_UPI0001C317CA ribonucleotide reductase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C317CA Length = 306 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 87/285 (30%), Gaps = 21/285 (7%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 +L W +++D ++D++D+ E E+ + L + + L+ Sbjct: 38 ELYSLWERQHWAVQDLDFTQDKLDWHERFDEEERFARMYGLSAFFIGEQRVAAELGP-LM 96 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 ++ ++ T E H + + D++ E ++++ S + Sbjct: 97 RAAPQEDMRLFLCTQIADEARHVAFFDRFYSEV---------DVLGVEGLEEKLAATSEH 147 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 + + L +L E ++ + + AL F Sbjct: 148 LNPEFGVLFDEMLKSRVDRLATEPEDLETLVEAITIYHMVIEGMLALTGQHF-----IID 202 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 + G + +ARDE H+ L + DP + E + Sbjct: 203 YNEREGTLPGFVEGFINVARDEHRHVAFGARFLRDMAR--SDPRHVAAIQRTLGEIAPVA 260 Query: 278 VQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 + WA D + G++ + RM+ +GL Sbjct: 261 EGVLKP--KWAPDD-DDFEIFGISVTETRAFAFRALERRMKVIGL 302 >UniRef50_C6WK83 Ribonucleotide reductase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WK83_ACTMD Length = 320 Score = 124 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 93/303 (30%), Gaps = 31/303 (10%) Query: 30 DQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQ 88 D +K + L ++ + W ++D S+D +D++ + + E+ F + Sbjct: 35 DLKKLPEYIDLYKRYFTHRWNAYDLDFSQDAVDWRTKMTDVERKAFTEIAAAFHHAERQV 94 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + L E + ++ T E H+ + R +V P Sbjct: 95 EVEL-PIFM-LTGSEEAKMYLCTQLEDEARHTLFFDRFYREVVGLPG------------- 139 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 + + + G + + V K++ +E + Sbjct: 140 ---DSVEELLASSFPHVPETFVGAFGLLSYLADDLRVDPENPAKRVRYATAYFMWIEGVL 196 Query: 209 FYVSFACSFAFAE-RELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + + + + G RDEA H+ L S +DP + Sbjct: 197 ALTIMKLTLTYCRTKGYLPGYYTGFIASCRDEARHVQFGMRFLRD--SVQEDPRLLH--- 251 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQ 327 E ++ + + + +G +++ + ++ N ++ VG+ LP Sbjct: 252 ----EIHETLRT--ELAMNGGASVPAPLEPLGFSEEEVVHFMIRQVNNKLSDVGISLPPD 305 Query: 328 TRS 330 + Sbjct: 306 IQE 308 >UniRef50_Q4VWF1 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Tortoise herpesvirus RepID=Q4VWF1_9HERP Length = 215 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 72/236 (30%), Gaps = 35/236 (14%) Query: 35 DIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 + L + W +E + D D+ L + + + D + Sbjct: 11 EDLNILRNLAIKNRWAEDEFMYTDDIKDFSRLDPEALDFYRFIFTFLSAADDKVNINL-D 69 Query: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVV----FDDIVTNEQIQKR 150 L L ++ + T E +HSR+Y + + N+ + V++ I+ + Sbjct: 70 QLKQLFPQKDVHHYYATQEDIECVHSRTYAGVQLALFNNDDDARRRYIEANVSHPTIETK 129 Query: 151 AEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFY 210 + +++ E + + L + +E I F Sbjct: 130 FDWLNTKIMENESVPEKYLL------------------------------MILVEGIFFV 159 Query: 211 VSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 266 SFA + LI+RDEA+H + + N + P I Sbjct: 160 ASFASIAYLRNHGGFNSVCRSNDLISRDEAIHTQASCCIFNNYLKDHEMPTDERIR 215 >UniRef50_Q16J81 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q16J81_AEDAE Length = 244 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 3/103 (2%) Query: 53 EVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETW 112 EVD+S+D D++ L EKH L + D + + + E + Sbjct: 142 EVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYGFQ 201 Query: 113 AFSETIHSRSYTHIIRNIVND---PSVVFDDIVTNEQIQKRAE 152 E +HS Y+ +I + D +F+ I ++K+AE Sbjct: 202 IAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKAE 244 >UniRef50_Q6QXF7 ORF38 n=4 Tax=Baculoviridae RepID=Q6QXF7_GVAS Length = 369 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 41/352 (11%), Positives = 99/352 (28%), Gaps = 47/352 (13%) Query: 29 YDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQ 88 + Y + + +W E + D + L + + + + D Sbjct: 39 WPP-TYAPSWHYYQLHQANYWSATEHEPLEDVSGFIKLDSQWQKAVLHSFAILAIGDDAV 97 Query: 89 GRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQ 148 + + L + + ETIH Y ++ Sbjct: 98 MQFIDENDLEWEECTQW--MFKDQGARETIHKIVYNKML--------------------- 134 Query: 149 KRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIR 208 A+ S + ++ Y + + + + + +KK L+ + E Sbjct: 135 HLADHSSEFTTSMLTSKKYINYILHNNSDLKLQKYKLEDEVMKK--AAFLIKMIFCERYL 192 Query: 209 FYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGAD-----DPEMA 263 F F E + +I + +DE +H + L+ +D + Sbjct: 193 FATPFLVINLMGESGFLNNCVRINMQVMKDEHVHYLHAVQLFRDLKPKSDQIDEINKLFF 252 Query: 264 EIAEECKQECYDLFVQA-AQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 ++A+E + ++ ++ A E + K + + + G+ Sbjct: 253 DMAQEFVEIVENMIMKIGAGLESKY--------------KQGFLDHSRFTLHTIYSDCGI 298 Query: 323 D-LPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSN 373 D P+I + + E + Y + D ++L + Sbjct: 299 DVPQSLAEYTTTPFIVFDKNTGADKFNLMESNSTVYKAVRAQYVPDWNNLQD 350 >UniRef50_C9RTF8 Ribonucleotide reductase n=5 Tax=Bacillaceae RepID=C9RTF8_GEOSY Length = 302 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 84/300 (28%), Gaps = 32/300 (10%) Query: 25 NVARYDQQKYDIFEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 ++ Y KL EK W P ++D S+D+ D+ L EK + + + Sbjct: 12 GTIDWEHPMY----KLYEKAKRNGKWNPADIDFSQDKEDFARLTSEEKIAALPLVAGFSA 67 Query: 84 LDSIQGRSPNVALLPLISIPELE--TWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDI 141 + L LE ++ T+ E H ++ + + Sbjct: 68 GEEAVTLDILPMAHALARQGRLEDVMFLTTFMHDEAKHVEMFSRWQQEVGIGA------- 120 Query: 142 VTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSV 201 +L + + + + + + Sbjct: 121 -----------------MDLSVFHNDHYKRIFYEALPEAMNRLYTDDSPEAVIRAATVYN 163 Query: 202 NALEAIRFYVSFACSFAFAER-ELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP 260 +E + ++ L G + I + DE H+ + + L + + Sbjct: 164 MIVEGTLAESGYYTFRQIYKKAGLFPGLLQGIDYLNMDEGRHIQFGLYTIQRLVNENERY 223 Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 I + + + A E + ++ D+L YV NIR + + Sbjct: 224 YDLFIQYMDELWPHVVGYVAYLTELGKRQQQLARTYALEIDYDMLNNYVVKQFNIRKKQI 283 >UniRef50_UPI000187E616 hypothetical protein MPER_06792 n=2 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187E616 Length = 184 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 2/103 (1%) Query: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA-LPEHE 70 + +EP+ + Q Y ++ +K + FW EE+D+S+D D+ + ++E Sbjct: 83 PESEEPLLKESKRRFVLFPIQ-YPEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRMNDNE 141 Query: 71 KHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWA 113 +H L + D I + + E + Sbjct: 142 RHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQI 184 >UniRef50_B9ZF52 Ribonucleotide reductase beta subunit-like protein n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZF52_NATMA Length = 309 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 99/302 (32%), Gaps = 35/302 (11%) Query: 38 EKLIEKQL-SFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVAL 96 +L K W P++ D+++DR D++ E E+H F++ + R+ + Sbjct: 12 YELYRKGKREGTWDPDDYDLTQDREDWEQFSEAEQHRFLATCSGFYDGEEDVTRTLAPYM 71 Query: 97 LPL---------ISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 + L + E ++ + E H+ ++ + + ++ Sbjct: 72 MALDALPNDELPFDTVQEEMYLAQQVYEEAKHTDLFSRYFEEVFGTQNTAPYREGGYQEQ 131 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + + D+L+ + + + E + L +E Sbjct: 132 GYSTDDLYDTADDLLAAVNSGDRTELVYSLGEAYLNYMGIVEAQLARGGYLSFDQMIE-- 189 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 + ++E + I + +DE H+ + ++ L A Sbjct: 190 ------LKATQMGRDSVLESFQQAIGKVRQDETRHIENGRWVMKQL---------AIAEP 234 Query: 268 ECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKD----ILCQY----VEYITNIRMQA 319 + + Y+ ++ + + +D L+ D G + D L QY ++YI R Sbjct: 235 DIVADVYEPRMEEYVENRLLSDPLYDDQPFEGYDPDRIGHQLVQYLQDTIDYIGAERFDQ 294 Query: 320 VG 321 G Sbjct: 295 YG 296 >UniRef50_Q3IMN4 Probable ribonucleoside-diphosphate reductase, beta subunit 2 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IMN4_NATPD Length = 306 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 84/290 (28%), Gaps = 28/290 (9%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHE------KHIFISNLKYQTLLDSIQGRSP 92 + + W P ++++ DR + +A + S + + Sbjct: 19 RYYRNAVERHWDPHDIELDTDRENLKAFLDSTDTPETYLDGLRSGVARFGAGEQAVTEDL 78 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L SI + + +V T + E H+ + R +++ D + + Sbjct: 79 APLATALGSIDD-QMFVTTQIYEEAKHTDFFDRYWREVIHPVE---DALGLDPSSPTDET 134 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 + Y+EL + T L + L ++ + Y + Sbjct: 135 WFNDAYEELFDRNEEAMERLLAAPTAEQFAKAYCHYHLVIEGILAQTGYYGMQ--QSYSA 192 Query: 213 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLR--SGADDPEMAEIAEECK 270 + E + G I +DE H+ L L D + +I E Sbjct: 193 DSYP----ELPHLPGLCDGFTKIRQDEGRHVGFGMAKLKALVGDGKVDPQLLDDIVGELL 248 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 D+ D F D +G+ + L + RM+ + Sbjct: 249 PLVDDITTDV-------GDESFDD---VGIPPEELEAFAAEKHTERMEQI 288 >UniRef50_Q5QL41 Ribonuleotide reductase small subunit n=1 Tax=Geobacillus kaustophilus RepID=Q5QL41_GEOKA Length = 292 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 30/251 (11%) Query: 37 FEKLIEKQLSF-FWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 KL + + F W P+E+D+S D+ ++ L E + I + Sbjct: 32 AWKLYQMAIRFGTWNPQEIDLSEDKKHFKQLDEQRRAYLIHFCTGFWNAEENVALKFCPW 91 Query: 96 LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGIS 155 ++ + E + ++ T E H+ + ++ V + ++ + +RA + Sbjct: 92 IM-IAPSIEQQAFLSTQLVDEFKHTEFFIRYFAEVLQTDREVKVLNLVHDTLDERARQLL 150 Query: 156 SYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 S D+ E L G + +E I+ V + Sbjct: 151 SVLDKGPEEREIAMLEGLVHYQG------------------------VIEGIQAMVGYEV 186 Query: 216 SFA-FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECY 274 A + + L G + + I RDE H+ L +++ + +P A+ +E +E Sbjct: 187 FEAVYGQYGLFPGLKEGFKQIKRDEGRHVGYG---LRMMKYLSKNPSYAKRIKELFEEFL 243 Query: 275 DLFVQAAQQEK 285 + QE Sbjct: 244 PKILVRYDQEI 254 >UniRef50_A4L226 Ribonucleotide reductase small subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L226_9VIRU Length = 371 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 31/246 (12%) Query: 38 EKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL 97 KQ++ W PEE+ +S+D+ + PE K I L + D+I ++ + + Sbjct: 72 YNFWLKQVALAWSPEEISLSKDKATFHRAPEQLKKISACMLGMLAIGDNIVLQNLSD-VS 130 Query: 98 PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSY 157 +I+ + + E HS Y+ + + + V+ K I++ Sbjct: 131 EIITNNYVLNAISRQEDVEKTHSDFYSRSLDVLNDVGKSVY---------YKSEHFINNE 181 Query: 158 YDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSF 217 ++ + + L + E + F +F Sbjct: 182 LYDIQQFSKK---------------------HSTNNLNKIAFFIMICERLYFLPAFVTVA 220 Query: 218 AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLF 277 A R + RDE LH +++ + E I E + Sbjct: 221 YLGITGYAPHTALGNRYVMRDENLHYNLWRNISANFEYKMNKQEALNILNEFEYILKCTI 280 Query: 278 VQAAQQ 283 + Sbjct: 281 KNIFKN 286 >UniRef50_Q4J6S8 Ribonucleotide reductase, small chain n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S8_SULAC Length = 330 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 85/266 (31%), Gaps = 33/266 (12%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 ++ +L E F W E+D S+DR D++ L ++ Y + Sbjct: 27 LDWNTFPM----RLFEIGEKFRWTAYELDFSKDREDWKKLKPSDRTQNKIISSYFLAGEE 82 Query: 87 IQGRSPNV--ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTN 144 R + + + E ++ +A E H+ ++ ++ + Sbjct: 83 CVARDILPLANAMEELGLIEEALYLTQFARDEANHTVAFRKWFESVGETEGI-------- 134 Query: 145 EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL 204 YD + Y L E T + + + ++S N + Sbjct: 135 -------------YDFTYKNEPYRRLFYEIIPTDMRRLY---NDPSPENIVRAVVSYNFV 178 Query: 205 -EAIRFYVSFACSF--AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 E I + + G K+++LI RDEA H++ ++ L+ S D Sbjct: 179 AEGILAETGYYGYVKGYEKILPALPGLYKMVKLITRDEARHISFGAYVAALMISMHGDSV 238 Query: 262 MAEIAEECKQECYDLFVQAAQQEKDW 287 + E Q ++ + + Sbjct: 239 LNEFNRYFGQLTQEIGFPLIEANRKI 264 >UniRef50_Q91ES7 ORF128 RR2A n=1 Tax=Cydia pomonella granulovirus RepID=Q91ES7_GVCP Length = 362 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 38/353 (10%), Positives = 81/353 (22%), Gaps = 42/353 (11%) Query: 24 VNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTL 83 + + Y + + W E D + + ++ + + + Sbjct: 34 NRLKIWPP-TYTPSWNYLVEHQINHWYANEHKPMDDLNGFDKIDSAWQNALLQSFAVLAI 92 Query: 84 LDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 D + + + + A ET H Y ++ Sbjct: 93 GDDKVMDLISNSDIEWEEST--KWMFADQAARETTHKIVYNRMLELAC------------ 138 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 +S Y + + ++ + K L+L M Sbjct: 139 ----------VSRSYTVNTLTSGDFSHYIMDCRVLDEFQLPERNEVNDKVLFLSTM--IL 186 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-EM 262 E F F E + KI + +DE +H +L L+ G + E+ Sbjct: 187 CERYLFAAPFLIINLMGESGFINKCVKINMQVMKDEHVHYKHAVQLLMDLKRGVTNEVEI 246 Query: 263 AEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL 322 E+ L L + + + + + + Sbjct: 247 NELFRGLSGAFMVLVESMV---MKICIDLTYQQKI------SVLHHTRFTLRDIFVTLQI 297 Query: 323 DLPFQTRS---NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLS 372 + P P + + E + Y D L Sbjct: 298 EPPPAVVQYTITPFKVFDK--NCGEDKFNLMESTSTVYNASNSIYYPAWDVLD 348 >UniRef50_Q4J6S5 Putative uncharacterized protein n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6S5_SULAC Length = 345 Score = 104 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 117/342 (34%), Gaps = 54/342 (15%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVD--VSRDRIDYQALPEHEKHIFISNLKYQTLL 84 ++ Y + +L K FW P + + +D+ D++ + E E+ I + Sbjct: 25 IDWNS--YPM--RLWAKSNELFWSPLQFKELIQQDKQDWETMSESEREISEYIATAFSAG 80 Query: 85 DSIQGRSPNVALL--PLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIV 142 + R ++ + E ++ + ET H+ ++ + +I D + Sbjct: 81 EEAVSRYLAELVIALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDSIGMDKDT--EKWT 138 Query: 143 TNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN 202 T I+ Y EL + G + + + + Sbjct: 139 TE---------INPSYYELFYVALPSAAYGVKANPSPESILRFT-----------ATYMF 178 Query: 203 ALEAIRFYVSFACSFAFAEREL-MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 261 ++E I F ER ++G +I++ +A DE+ HL ++ +L +D Sbjct: 179 SIEGIAAETGFYFWRTMWERGRHLKGIYEIVKRVAADESRHLAFGTYLTTMLI--GEDQS 236 Query: 262 MAEIAEECKQE----CYDLFVQAAQQEKD-----------WADYLFRD---GSMIGLNKD 303 + + E L +Q+ + + ++++++ GS++ Sbjct: 237 LYDKFLEYFNYAGGLAVRLIGTIVEQQVNKWEPYKEKWGRYFEWVYKENGLGSLVDYAAK 296 Query: 304 ILCQYVEYITNIRMQAVGLDLP-FQTRSNPIPWINTWLVSDN 344 ++ + Y+ R++ + + + P I + + Sbjct: 297 MVQHRLFYV--NRLRNANREKLRYMPLNEAAPVIENFDTVEK 336 >UniRef50_C7PXC9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXC9_CATAD Length = 353 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 65/216 (30%), Gaps = 23/216 (10%) Query: 39 KLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLP 98 L + S W +D++RDR + L + +S L + +S R+ AL Sbjct: 50 DLYNRWESRQWSVAGLDLARDRRRFAELRPFARREILSALAELEIGESCVTRTL-SALAD 108 Query: 99 LISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYY 158 ++ T E H R + + ++ A + Sbjct: 109 HAPDEADRLYLCTQMADEARHVRFFQSYLSDV--------------------AGIAAEQL 148 Query: 159 DELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL--EAIRFYVSFACS 216 + M + T V R ++++ + L E + Sbjct: 149 EPHGAMGGESGFGVVYDPLLTRHTAAVRTRPDDRRVWHVAVVSYHLLAEGLLAVAGLRAL 208 Query: 217 FAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 A A+ + ++ + + RDEA H+T Sbjct: 209 RALAKSCELTALSEGLANVVRDEARHVTFGLAATRR 244 >UniRef50_UPI0001C318F2 Sterol-binding domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318F2 Length = 419 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 70/241 (29%), Gaps = 22/241 (9%) Query: 37 FEKLIEKQLSFFWRPEEVDVSRDRIDY-QALPEHEKHIFISNLKYQTLLDSIQGRSPNVA 95 +E L + WR E+D + D + + E+ + N + + + Sbjct: 12 YEDLYARWERGNWRATEIDFTADSEQWQERFDAFERRAALWNYSLFFHGEDAVADNLSPY 71 Query: 96 LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGIS 155 + + E + ++ T E H+ + + + +G Sbjct: 72 I-DAAPLEEQKYFLTTQQVDEARHAVFFKRFMHEVC-----------------DVGDGTM 113 Query: 156 SYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFAC 215 + I+ W R K + +EA Sbjct: 114 AGGLAAIQPDLTWGFRRVFDRLDTMADELRRDRSKPKLAAALALYHLIVEATLAQSGQHF 173 Query: 216 SF-AFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECY 274 +R+++ G +R + DE H+ +L L+ +DPE E E +E Sbjct: 174 ITGYLEQRDVLPGFYGGMRNVEFDEQRHIGFGVKLLYDLQR--EDPECKEAVAELLREVL 231 Query: 275 D 275 Sbjct: 232 P 232 >UniRef50_Q3INJ5 Probable ribonucleoside-diphosphate reductase, beta subunit 3 n=2 Tax=Halobacteriaceae RepID=Q3INJ5_NATPD Length = 316 Score = 92.5 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 87/284 (30%), Gaps = 20/284 (7%) Query: 40 LIEKQLSFFWRP-EEVD---VSRDRI---DYQALPEHEKHIFISNLKYQTLLDSIQGRSP 92 + + W P E+++ + +DR D E E + L + Sbjct: 22 YFKHAVYNHWDPYEDIEKALIEQDRKRLIDADEFGETEFEDLMRTLALFGAGEEAVTEDL 81 Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAE 152 L+ ++ + +V + + E H++ + R +++ + Q+ Sbjct: 82 AP-LMLVVDDINDQMFVSSQIYEEAKHTQFFDRYWREVIHPVADARGFERRAPTDQR--- 137 Query: 153 GISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVS 212 Y +L + T + + +++ I +S Sbjct: 138 FFVDGYVDLFDRTEAAMERLLEPGEDTPTNRVRAYCHYHLTV-ESVLAQTGYWGIVSSMS 196 Query: 213 FACSFAFAERE--LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECK 270 S A E +EG K I I DE H+ + A+D + E Sbjct: 197 PRGSEALREDGMPHLEGLVKGISFIRSDEGRHVGFGMQKVQS--HLAEDGVDESVVRETL 254 Query: 271 QECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITN 314 QE L + D + ++ + L + +E IT+ Sbjct: 255 QELLPLVAETVSA----TDEVTDPEPLVEYASEKLTRRIEVITD 294 >UniRef50_B2GEC7 Ribonucleoside-diphosphate reductase beta subunit n=3 Tax=Lactobacillus fermentum RepID=B2GEC7_LACF3 Length = 306 Score = 87.9 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 77/267 (28%), Gaps = 33/267 (12%) Query: 25 NVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLL 84 +D+Q+ + + K + FW V ++ D+ + AL ++ L + LL Sbjct: 7 KAINWDEQEDQVDQATWLKLTNNFWLDTRVPITDDQPSWHALTAQQQAQVGHALAGRALL 66 Query: 85 DSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTN 144 + Q +L + E + F E++H+++ T I R + + Sbjct: 67 SAFQSELGAPSLRAGRRTQQEEAVLNLITFMESVHTKAVTTIFRRLTD------------ 114 Query: 145 EQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNAL 204 +E W + + L L++ L Sbjct: 115 --------------EETTAAYYAWADGQAPLQAALTDLTKGIEGDDLMRRGLFLIADTVL 160 Query: 205 EAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAE 264 A + ++++ LI RD + + + Sbjct: 161 CAGFDWAVLTQPALAQTNQMLKNILTGN-LIFRD------YLAYKFRQGIAELPFAKQEA 213 Query: 265 IAEECKQECYDLFVQAAQQEKDWADYL 291 + + + L A QQ + + Sbjct: 214 LVAQLTKGAQSLIKLAHQQNEALLEDA 240 >UniRef50_C7J3K0 Os06g0257450 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=C7J3K0_ORYSJ Length = 162 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLV 359 +N D++ QY+E++ + + A+G + +NP W+ L+S + E V Y Sbjct: 83 MNGDLMSQYIEFVADRLLMALGCKKMYNV-ANPFDWME--LISLQGKTNFFEKRVGDYQK 139 Query: 360 GQIDSEVD 367 + S ++ Sbjct: 140 ASVMSSLN 147 >UniRef50_C5K5J6 Ribonucleoside-diphosphate reductase small chain, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K5J6_9ALVE Length = 157 Score = 84.0 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 45/95 (47%), Gaps = 4/95 (4%) Query: 261 EMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAV 320 ++ + K E + + A E+++ G +IG+N +++ +Y+E++ + + A+ Sbjct: 19 DLRDWETLTKNEQHFIKNSAVNVEREFITDALPVG-LIGMNAELMGRYIEFVADRLLVAL 77 Query: 321 GLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVS 355 G + + +NP W+ ++S + E V Sbjct: 78 GYAKIYNS-ANPFDWMT--MISLQGKTNFFEKRVG 109 Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 23/37 (62%) Query: 41 IEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISN 77 ++ + FW EE+D+ +D D++ L ++E+H ++ Sbjct: 1 YKQHEASFWTAEEIDLGQDLRDWETLTKNEQHFIKNS 37 >UniRef50_Q4TH71 Chromosome undetermined SCAF3173, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TH71_TETNG Length = 441 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 3/69 (4%) Query: 93 NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV---VFDDIVTNEQIQK 149 + + E + E IHS Y+ +I + +PS +F+ I T ++K Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKK 293 Query: 150 RAEGISSYY 158 +A+ ++ Sbjct: 294 KADWALNWI 302 >UniRef50_UPI00006DCD87 hypothetical protein CdifQ_04003425 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCD87 Length = 104 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 266 AEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLP 325 + +++ Y + + E ++ + ++R+ + + +++Y N ++ +G + Sbjct: 3 KKMLEEKMYSILYSLMENEIEYTNVIYRESGLE----KEVVNFLKYNANRALENLGFEKL 58 Query: 326 FQTRS-NPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTD 369 + + NPI + L ++ + + Y G + D D Sbjct: 59 YTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQKGVYEELEDED 101 >UniRef50_Q42088 Ribonucleotide reductase small subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42088_ARATH Length = 83 Score = 64.8 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPE 68 + + +EP+ Q + +Y ++ +K + FW EEVD+S D ++AL + Sbjct: 1 MEEGESEEPLLMAQNQRFTMFP-IRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTD 59 Query: 69 HE 70 E Sbjct: 60 SE 61 >UniRef50_D1II58 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=5 Tax=rosids RepID=D1II58_VITVI Length = 301 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 207 IRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 + +F F +R LM G LI+RDE LH + + Sbjct: 6 LFLVFNFCDIFW-KKRGLMPGLTFSNELISRDEGLHCDFACLLYKNRKPQ 54 >UniRef50_D1VPU5 Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=D1VPU5_9ACTO Length = 396 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 68/277 (24%), Gaps = 67/277 (24%) Query: 40 LIEKQLSFFWRP-EEVDVSRDRI------------------DYQALPEHEKHIFISNLK- 79 L +K W +D S D + + + E+ +L Sbjct: 40 LYQKGKDKQWDAGTRIDWSLDVPYGRPLGLPDESVALFGTPVWDKMNDRERDEVRRHLAS 99 Query: 80 --YQTLLDSIQGRSP-NVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSV 136 + L QG + ++ + + + + T E H Y + Sbjct: 100 WQFSQFLHGEQGAMICSARIVESVPDLDAKFYATTQTIDEARHVEVYARFL--------- 150 Query: 137 VFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYL 196 + L + K + + Sbjct: 151 ------------------------------HEKLGLVYPINDHLKALLDQTLSDSRWDIP 180 Query: 197 CLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSG 256 L +E +F + +++ + +DEA H+ + L Sbjct: 181 YLGMQVLIEG-LALAAFGVLRDLTP---LPLPKQVLAYVMQDEARHVAFGRLALRDYYRQ 236 Query: 257 ADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFR 293 D E AE E + CY L + + WA Sbjct: 237 LSDAERAEREEFAAEGCY-LMYERINGSEVWATLGLD 272 >UniRef50_B2H6U3 Conserved protein n=8 Tax=Bacteria RepID=B2H6U3_BURPS Length = 361 Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 65/244 (26%), Gaps = 28/244 (11%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGR 90 + + + + W P + D +D A +++ ++ D Sbjct: 50 KIETPKLYDIYDSARDAGWSPHTLPW--DTLDVNAFTLDQRYAIAYWFALLSVFDGSGPT 107 Query: 91 SPNVALLPLISIPE---LETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI 147 A++ E + + E H IR + D + ++ ++ Sbjct: 108 VFARAMIHTYESKEEDPVRKCFFSVVRDEMNHEEVCGRAIRLLTPDGPLGYEPETALGKL 167 Query: 148 QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAI 207 + L G+ G V L L A + Sbjct: 168 ARNN---------------VEWLYYNGSRYWTGFNRAVDKYPLPILFTSFLFGEVA-SST 211 Query: 208 RFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAE 267 F+ + + + + R I +DE HL +L L D + I Sbjct: 212 LFHGMYQNTT-------IPVFKEAFRRIGQDEGRHLGICLTVLQKLLPQLTDQDKEMITI 264 Query: 268 ECKQ 271 + + Sbjct: 265 QLRA 268 >UniRef50_D1II57 Whole genome shotgun sequence of line PN40024, scaffold_426.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1II57_VITVI Length = 75 Score = 48.2 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 300 LNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337 +N ++ QY++++ + + A+G + + NP W+ Sbjct: 1 MNATLMSQYIKFVADHLLVAIGYERKYNVE-NPFDWME 37 >UniRef50_UPI0001AF6C58 hypothetical protein MkanA1_14310 n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6C58 Length = 423 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 73/272 (26%), Gaps = 78/272 (28%) Query: 36 IFEKLIEKQLSFFWR-----PEEVDVSRDRIDYQALPE------------------HEK- 71 L + +S W P E+DV+ D D Q LP E+ Sbjct: 85 EMYDLYRRAVSKQWDGNADLPWELDVTPDNPDAQILPRSFVPFKEIEGFGVRLTALEERN 144 Query: 72 ---HIFISNLKYQTLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSETIHSRSYTHII 127 I L + QG A + + + + + T E H + + Sbjct: 145 LTWDIAAWLLSQFMHGE--QGALFASAQVTECVHWTDAKLYGATQVMDEGRHLEVFLRYL 202 Query: 128 RNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSL 187 + E I + D L + G G Sbjct: 203 DT--------------------KLEKIYTVNDNLFVLIDELMTDGRWDFKFLGMQ----- 237 Query: 188 RELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQ 247 +E +F F L++ ++++++ +DEA H+ Sbjct: 238 --------------IMIEG-LALGAFTTIFQQTREPLLK---QLLKMVIQDEARHVHYGV 279 Query: 248 HMLN-LLRSGADDPEMAEIAEECKQECYDLFV 278 L + + E E + Y++ + Sbjct: 280 LALRDHITQNISEKE----RREREDWVYEVAL 307 >UniRef50_C1V565 Putative uncharacterized protein n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V565_9EURY Length = 130 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 11/114 (9%), Positives = 33/114 (28%), Gaps = 4/114 (3%) Query: 56 VSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFS 115 ++ DR L + + + L + + +V + + Sbjct: 1 MAADRAAISDLGRSAFTQLRATIAMFGAGEENVTEDLVP-LAATTTNKTDQRFVASHIYE 59 Query: 116 ETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWH 169 E H+ + ++++ T+ + ++ Y+E+ T Sbjct: 60 EAKHAAFFERYWKDVIRPAEDARGLDPTDPTADR---WFTAAYEEIFNRTETAM 110 >UniRef50_A4X8S2 Putative uncharacterized protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4X8S2_SALTO Length = 321 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 91/327 (27%), Gaps = 82/327 (25%) Query: 27 ARYD-QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLD 85 +D + L E+ S W+ +VD + D + LP+ S D Sbjct: 13 LNWDYEATDPRLMALYERAKSAQWKVSDVDWTVDVPFGEPLPDD------SAFAMAAFAD 66 Query: 86 S---IQGRSPNVALLPLIS--------------------------IPELETWVETWAFSE 116 S +GR+ + + T A E Sbjct: 67 SPLAARGRAAWDDFRWEFQSWMVSQFLHGEQAAMVVAARLVAAVPDLDSKFCAATQAVDE 126 Query: 117 TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTH 176 H ++ +R + +P V Sbjct: 127 ARHVEVFSRYLREKIPEPYEV--------------------------------------- 147 Query: 177 TVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 + + + + + L +EAI SF S + L++ RL+A Sbjct: 148 SPPLRELLTDILSDSRWDVTALGMQIMVEAI-AMASFRLSNSSFHDPLIKNLT---RLVA 203 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFR--D 294 RDEA H+T L L E AE E+ E L Q W + Sbjct: 204 RDEARHVTFGVLSLRGLYGQLTTAERAER-EDLVLEAASLIRQRFLLGDIWQRLEVDRAE 262 Query: 295 GSMIGLNKDILCQYVEYITNIRMQAVG 321 G + +++ Y + + + A+G Sbjct: 263 GVSFAASHELMIMYRQAVFSRVAAALG 289 >UniRef50_D2B211 Putative uncharacterized protein n=15 Tax=Bacteria RepID=D2B211_STRRD Length = 371 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 71/254 (27%), Gaps = 60/254 (23%) Query: 63 YQALPEHEKHIFI-----SNLKYQTLLDSIQGRSP-NVALLPLISIPELETWVETWAFSE 116 + + ++ + QG + ++ + + + + T E Sbjct: 82 WDRMDARQRQEVRLHGAAWQFSQFLHGE--QGAMICSARIVESVPDLDSKFYAATQTMDE 139 Query: 117 TIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTH 176 H+ +Y + V NE ++ Sbjct: 140 ARHAETYARFL------QEKVGLAYPINEHLK---------------------------- 165 Query: 177 TVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIA 236 + + + L +E +F + L + +I+ + Sbjct: 166 -----ALLDNTLSDSRWDMPYLGMQVLIEG-LALAAFGVMRDITTKPLPK---QILAYVM 216 Query: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296 +DEA H+ + L S + E+ E + + CY + + +E Sbjct: 217 QDEARHVAFGRMALRDYYSQLTETELREREDFVIEGCYLMRDRLRGRET---------WE 267 Query: 297 MIGLNKDILCQYVE 310 IGLN+ + + +E Sbjct: 268 TIGLNRSEVAEAME 281 >UniRef50_Q47J53 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q47J53_DECAR Length = 342 Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 86/293 (29%), Gaps = 45/293 (15%) Query: 27 ARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDS 86 ++ + +++ E L W PE++ D +D + E+ ++ D+ Sbjct: 26 LSWNSKT-KKLQEVWEASLRENWDPEKLPW--DTLDVDSYTWEERESIAYWWSLLSVFDA 82 Query: 87 IQGRSPNVALLPLISIPE---LETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVT 143 AL+ + E + + E H I ++ P + + T Sbjct: 83 SAPPVFAEALIKTYEVHEEDPVRKCFFSVTRDEQNHEIMCGLAITKMLGHPDPITYEPKT 142 Query: 144 NEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 203 + + +R + + L G+ G V +L LM Sbjct: 143 D--LGRRLQKNVKW------------LYFNGSRYWTGYKQAVPKYDLAVLFSSFLMGE-- 186 Query: 204 LEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA 263 I F F + + + + + I RDE H+ ++ Sbjct: 187 ---IAAATIFKQMFDNSREAVFK---EGFKNIGRDEGRHMAICMAVMER----------- 229 Query: 264 EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIR 316 K+E + + + + + + M + ++I N R Sbjct: 230 -DYPGLKEETKAIVTKQIRAGYLFLSAVLFEPPMEFWDLPE-----DFIANQR 276 >UniRef50_Q4J6K5 Conserved protein n=13 Tax=Sulfolobaceae RepID=Q4J6K5_SULAC Length = 342 Score = 44.0 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 29/272 (10%), Positives = 72/272 (26%), Gaps = 33/272 (12%) Query: 9 TKNDQLKEPMFFGQPVNVARYDQ------QKYDIFEKLIEKQLSFFWRPEEVDVSRDRID 62 + E + F + Y+ + +L + W + +D R + Sbjct: 1 MSKENKYESINFEESPTYPEYNIYPPIWDFDNERAWQLYRRAKKEQWDEDNIDWRR-VKE 59 Query: 63 YQA-LPEHEKHIFISNLKYQTLLD--SIQGRSPNVALLPLISIPELETWVETWAFSETIH 119 + + L ++ + D + V + + T + E H Sbjct: 60 WMSGLDRKQRLAIAYWYGLLSNFDHATPVFAYAVVKSFEHHLDTAVRGILTTITWDENRH 119 Query: 120 SRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVN 179 + I+N + + + ++K+A + G+ Sbjct: 120 NLVCGLAIKNAM---EGFPLNFKPQDDLEKKAMLNVQWV------------WWNGSRYWK 164 Query: 180 GKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDE 239 L +M A + + + E +KI + A DE Sbjct: 165 AYLDAYKKYALDVLFTSFMMGEAAATTVF--------TSMGKNAKNEEFSKIFKNTAVDE 216 Query: 240 ALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271 H T ++ ++ + ++ + Sbjct: 217 TRHYAFTHLIMTQNAPNMNEDRKKLVTKQIRA 248 >UniRef50_B2HNZ6 Putative uncharacterized protein n=7 Tax=Bacteria RepID=B2HNZ6_MYCMM Length = 366 Score = 42.4 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 28/298 (9%), Positives = 72/298 (24%), Gaps = 76/298 (25%) Query: 37 FEKLIEKQLSFFWRPE-EVDVSRDRI------------------DYQALPEHEK-----H 72 L +K W + +D +D + A E + H Sbjct: 37 LLSLYQKGKDKQWDAQSRIDWGQDVDPMNAIALPDEFHPLFGSPMWNAADEARRSEMRQH 96 Query: 73 IFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVN 132 + ++ ++ + + + T E H +++ ++ + Sbjct: 97 FQAWQFSQFLHGEQGAMVC-AAKIVEVVPDLDAKFYAATQTMDEARHVEAFSRFLQEKIG 155 Query: 133 DPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKK 192 + + + + Y + + + Sbjct: 156 ---------LVYPINKHLTALLDDTLRDSRWDMPYLGMQVLIEGLALAAFGVLRDMAAPE 206 Query: 193 KLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNL 252 L +++ + +DEA H+ + L Sbjct: 207 SLAKQVLA---------------------------------YVMQDEARHVAFGRISLKD 233 Query: 253 LRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVE 310 S + E E E CY L + E+ + +G++ ++V+ Sbjct: 234 YYSALTEAEREEREEFVVDACY-LMRDRFRGEEVF--------ETLGMDVKACAEWVD 282 >UniRef50_A4CGF1 2-oxoglutarate dehydrogenase, E1 component n=27 Tax=cellular organisms RepID=A4CGF1_9FLAO Length = 940 Score = 42.4 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Query: 283 QEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVS 342 E+ + +F G +IG+ L + ++++T I A+G++ + + WI WL Sbjct: 117 LEESDLEKVFSAGDIIGIGPSTLREIIDHLTRIYCDAIGVEYMYIRSPERVEWIQQWLNV 176 Query: 343 DNVQVAPQEVEVSSYLVGQIDSEVDTDDL 371 ++ Y++ +++ V + Sbjct: 177 NDNHPNFSPERKK-YILRKLNEAVSFEGF 204 >UniRef50_A6GD89 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GD89_9DELT Length = 384 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 72/288 (25%), Gaps = 76/288 (26%) Query: 31 QQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ----------------------ALPE 68 + +L + W +++ D + L Sbjct: 61 PADFPEMAELYTRAKQGQWNGDDLPWHTDVDPFNPEVPLLPKSFLAAGDLSQELGMLLSP 120 Query: 69 HEKH-----IFISNLKYQTLLDSIQGRSPNVA-LLPLISIPELETWVETWAFSETIHSRS 122 E+ + L + QG A + + + + + T E H Sbjct: 121 KEQRELAYSVICWMLSQFLHGE--QGALFAAAQVTEAVQFFDGKLYGATQVMDEGRHIEV 178 Query: 123 YTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKT 182 +T + + + Y N Sbjct: 179 FTRYLD-----------------------QKLGRLYQ----------------INDNLFV 199 Query: 183 VTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH 242 + SL + L + +E +F + L+ +++R++ +DEA H Sbjct: 200 ILDSLMTDSRWDMKFLGTQIMIEG-LALGAFGVLYKVTGEPLLR---ELLRMVIQDEARH 255 Query: 243 LTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQ---AAQQEKDW 287 + L + A + E+ E L A + ++W Sbjct: 256 VHYGVLALREHFTKALSERERQEREDWAFEVALLMRNRFMAYEVYEEW 303 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.128 0.343 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,036,475,112 Number of Sequences: 3077464 Number of extensions: 77667159 Number of successful extensions: 243451 Number of sequences better than 1.0e-01: 167 Number of HSP's better than 0.1 without gapping: 312 Number of HSP's successfully gapped in prelim test: 94 Number of HSP's that attempted gapping in prelim test: 241791 Number of HSP's gapped (non-prelim): 513 length of query: 376 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 246 effective length of database: 640,326,036 effective search space: 157520204856 effective search space used: 157520204856 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 94 (40.9 bits)