454 d1vr6a1 Probab=41.26   E-value=26  Score=15.59  Aligned_columns=162  Identities=14%

Q ss_pred             HHHHHHHHHCCCCEE-EECCCCCCHH-----HHHHHHHHHHHHHHHHCCEEEEC----CCHHHHHHCCCCEEEECHHH-C
Q ss_conf             999999996799799-9849777889-----99999999999998729989997----98578773158889987577-9
Q batch____        22 VQWIERLLDAGVRTL-QLRIKDRRDE-----EVEADVVAAIALGRRYNARLFIN----DYWRLAIKHQAYGVHLGQED-L   90 (211)
Q Consensus        22 ~~~le~~l~~Gv~~i-qlR~k~~~~~-----e~~~~a~~l~~l~~~~~~~lii~----~~~~~a~~~~adGvHl~~~d-~   90 (211)
                      .+..+++.+.|++++ -+-.|..+.+     --.+-.+.++++++++|.+++-.    .+++...++ +|-+.+++.+ .
T Consensus       111 ~~~A~~l~~~g~~~~r~~~~KpRTs~~~f~G~g~~gl~~L~e~~~~~Glpv~tev~d~~~~~~v~~~-vd~lqIGAr~~~  189 (338)
T d1vr6a1         111 METAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY-ADIIQIGARNAQ  189 (338)
T ss_dssp             HHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH-CSEEEECGGGTT
T ss_pred             HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH-HHHHHCCCCCCC
T ss_conf             9999999861343557135257788763367727889999999987089089630698778888863-214211733445


Q ss_pred             CHHHHHHHCCCCCEEEEEEC---CHHHHHHH----HHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEE
Q ss_conf             97799872299958999758---99999999----844998999823246777688755459899999998327996999
Q batch____        91 QATDLNAIRAAGLRLGVSTH---DDMEIDVA----LAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYPTVA  163 (211)
Q Consensus        91 ~~~~~~~~~~~~~iiG~S~h---~~~e~~~A----~~~gadyi~~~p~f~t~sk~~~~~~~g~~~l~~~~~~~~~~pv~a  163 (211)
                      +...++..-..++-+++|..   +.+|...|    ...|...+.+...--++..+.......+..+ ...+...+.||+.
T Consensus       190 n~~lL~~~a~~gkPV~lk~G~~~ti~e~~~Ave~i~~~GN~~v~L~~RG~~t~~~~~~~~~dl~~i-~~lk~~~~~PVi~  268 (338)
T d1vr6a1         190 NFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAV-PIIRKESHLPILV  268 (338)
T ss_dssp             CHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHH-HHHHHHBSSCEEE
T ss_pred             CHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHH-HHHHHCCCCCEEE
T ss_conf             999999863179829995898899999999999999679984999950655799998101387789-9998316998899


Q ss_pred             E---CCCCHHHHHHH----HHCCCCEEEE
Q ss_conf             6---36798989999----9749999998
Q batch____       164 I---GGISLARAPAV----IATGVGSIAV  185 (211)
Q Consensus       164 i---GGi~~~ni~~l----~~~Ga~gvav  185 (211)
                      .   |--..+-...+    .++||+|+.+
T Consensus       269 D~sHg~s~~~~~~~~~~AAvA~Ga~G~iI  297 (338)
T d1vr6a1         269 DPSHSGGRRDLVIPLSRAAIAVGAHGIIV  297 (338)
T ss_dssp             CHHHHHCSGGGHHHHHHHHHHHTCSEEEE
T ss_pred             ECCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf             62556787302468989999708987999