BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (334 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B3HUU9 DNA polymerase III subunit delta' n=6 Tax=Entero... 471 e-131 UniRef50_C9Y1I8 DNA polymerase III subunit delta' n=2 Tax=Cronob... 414 e-114 UniRef50_UPI000191451E DNA polymerase III subunit delta'''' n=1 ... 324 3e-87 UniRef50_O69170 DNA polymerase III subunit delta' n=152 Tax=Ente... 323 6e-87 UniRef50_C0B0Z4 Putative uncharacterized protein n=2 Tax=Enterob... 273 7e-72 UniRef50_Q2NU34 DNA polymerase III delta prime subunit n=2 Tax=G... 269 1e-70 UniRef50_Q8K9J2 DNA polymerase III subunit delta' n=4 Tax=Buchne... 213 6e-54 UniRef50_Q7VR24 DNA polymerase III, delta prime subunit n=2 Tax=... 203 8e-51 UniRef50_P43748 DNA polymerase III subunit delta' n=23 Tax=Paste... 196 9e-49 UniRef50_B8F7F9 DNA polymerase III subunit delta n=9 Tax=Pasteur... 194 3e-48 UniRef50_A6FHN9 HolB n=1 Tax=Moritella sp. PE36 RepID=A6FHN9_9GAMM 187 6e-46 UniRef50_C6APV7 DNA polymerase III subunit delta' n=1 Tax=Aggreg... 182 1e-44 UniRef50_A0KKI0 DNA polymerase III, delta' subunit n=2 Tax=Aerom... 169 1e-40 UniRef50_Q89AG8 DNA polymerase III subunit delta' n=1 Tax=Buchne... 163 6e-39 UniRef50_A1STW9 DNA polymerase III, delta prime subunit n=2 Tax=... 159 2e-37 UniRef50_Q3JAL5 DNA polymerase III, delta prime subunit n=2 Tax=... 156 8e-37 UniRef50_A7K5T9 DNA polymerase III delta prime subunit n=12 Tax=... 154 4e-36 UniRef50_C5BU66 DNA polymerase III subunit delta prime n=1 Tax=T... 152 1e-35 UniRef50_A1WSZ0 DNA polymerase III, delta prime subunit n=1 Tax=... 152 2e-35 UniRef50_Q0VQM5 DNA polymerase III, delta prime subunit n=2 Tax=... 151 2e-35 UniRef50_A0YGP8 DNA polymerase III subunit delta n=1 Tax=marine ... 149 9e-35 UniRef50_A9NBZ0 DNA polymerase III, delta' subunit n=6 Tax=Coxie... 149 1e-34 UniRef50_B3PHI9 DNA polymerase III, delta prime subunit n=1 Tax=... 149 2e-34 UniRef50_A5F6P8 DNA polymerase III, delta prime subunit n=35 Tax... 148 2e-34 UniRef50_D0IB97 DNA polymerase III delta prime subunit n=7 Tax=V... 148 3e-34 UniRef50_Q1N4U3 DNA polymerase III subunit delta n=1 Tax=Bermane... 146 9e-34 UniRef50_A6D7X6 DNA polymerase III subunit delta' n=1 Tax=Vibrio... 146 1e-33 UniRef50_C4L8D9 DNA polymerase III, delta prime subunit n=1 Tax=... 146 1e-33 UniRef50_Q2BG76 DNA polymerase III subunit delta n=1 Tax=Neptuni... 145 2e-33 UniRef50_B4S1N1 DNA polymerase III subunit delta n=2 Tax=Alterom... 144 4e-33 UniRef50_Q15U04 DNA-directed DNA polymerase n=1 Tax=Pseudoaltero... 144 5e-33 UniRef50_Q21K67 DNA polymerase III, delta prime subunit n=1 Tax=... 142 2e-32 UniRef50_A8PMJ4 DNA polymerase III subunit delta' n=1 Tax=Ricket... 141 3e-32 UniRef50_A8H3V9 DNA polymerase III, delta prime subunit n=7 Tax=... 141 3e-32 UniRef50_B7VLY9 DNA polymerase III delta' subunit n=5 Tax=Vibrio... 141 4e-32 UniRef50_Q1YTP5 DNA polymerase III, delta prime subunit n=1 Tax=... 140 6e-32 UniRef50_A4BDY7 DNA polymerase III subunit delta n=1 Tax=Reineke... 139 1e-31 UniRef50_UPI0000E0FA0C DNA polymerase III subunit delta n=1 Tax=... 139 2e-31 UniRef50_A3WQJ1 DNA polymerase III, delta prime subunit, ATPase ... 137 7e-31 UniRef50_A4BMM6 DNA polymerase III, delta prime subunit n=1 Tax=... 135 2e-30 UniRef50_A4CAL1 Putative DNA polymerase III delta' subunit n=1 T... 135 2e-30 UniRef50_Q5QZ33 DNA polymerase III, delta prime subunit, ATPase ... 135 3e-30 UniRef50_P52024 DNA polymerase III subunit delta' n=22 Tax=Pseud... 133 9e-30 UniRef50_B5FG33 DNA polymerase III, delta' subunit n=3 Tax=Aliiv... 132 1e-29 UniRef50_Q2SIR6 DNA polymerase III delta prime subunit n=1 Tax=H... 131 4e-29 UniRef50_B8KGN9 DNA polymerase III, delta prime subunit n=1 Tax=... 130 7e-29 UniRef50_Q8D3A6 HolB protein n=1 Tax=Wigglesworthia glossinidia ... 129 2e-28 UniRef50_Q1QX48 DNA polymerase III, delta prime subunit n=1 Tax=... 128 2e-28 UniRef50_Q0A8S3 DNA polymerase III, delta prime subunit n=1 Tax=... 128 4e-28 UniRef50_Q606M1 DNA polymerase III, delta prime subunit n=1 Tax=... 125 2e-27 UniRef50_Q057L1 DNA polymerase III, d' subunit n=1 Tax=Buchnera ... 124 5e-27 UniRef50_C5S6L9 DNA polymerase III, delta prime subunit n=1 Tax=... 123 9e-27 UniRef50_A0Z287 DNA polymerase III subunit delta n=1 Tax=marine ... 122 1e-26 UniRef50_A7BV86 DNA polymerase III, delta prime subunit n=1 Tax=... 122 2e-26 UniRef50_C9LSD1 DNA polymerase III, delta prime subunit n=1 Tax=... 121 4e-26 UniRef50_B8KQW7 DNA polymerase III, delta prime subunit n=1 Tax=... 120 6e-26 UniRef50_B5JVJ6 DNA polymerase III, delta prime subunit n=1 Tax=... 120 9e-26 UniRef50_A5D691 DNA polymerase III, gamma/tau subunits n=1 Tax=P... 119 2e-25 UniRef50_B9ZR24 DNA-directed DNA polymerase n=1 Tax=Thioalkalivi... 119 2e-25 UniRef50_A6VXK9 DNA polymerase III, delta prime subunit n=1 Tax=... 119 2e-25 UniRef50_C7RBH1 DNA-directed DNA polymerase n=1 Tax=Kangiella ko... 118 3e-25 UniRef50_A3YHR7 DNA polymerase III subunit delta n=1 Tax=Marinom... 116 1e-24 UniRef50_B8GSK5 DNA-directed DNA polymerase n=1 Tax=Thioalkalivi... 116 1e-24 UniRef50_A4J0K7 DNA polymerase III, delta prime subunit n=1 Tax=... 115 2e-24 UniRef50_C1DCQ8 HolB n=2 Tax=Neisseriaceae RepID=C1DCQ8_LARHH 115 2e-24 UniRef50_A4XHH7 DNA polymerase III, delta prime subunit n=2 Tax=... 114 4e-24 UniRef50_Q7NRQ8 DNA-directed DNA polymerase III, delta subunit n... 114 7e-24 UniRef50_B7S3H8 Putative uncharacterized protein n=1 Tax=marine ... 113 1e-23 UniRef50_A0L8T4 DNA polymerase III, delta prime subunit n=1 Tax=... 112 3e-23 UniRef50_A4A8H5 DNA polymerase III, delta prime subunit n=1 Tax=... 111 3e-23 UniRef50_Q1H170 DNA polymerase III, delta prime subunit n=1 Tax=... 111 4e-23 UniRef50_C5V2Y1 DNA polymerase III, delta prime subunit n=1 Tax=... 110 5e-23 UniRef50_C0N2D2 Putative uncharacterized protein n=1 Tax=Methylo... 110 8e-23 UniRef50_B2A325 DNA-directed DNA polymerase n=1 Tax=Natranaerobi... 109 1e-22 UniRef50_C6XDK0 DNA polymerase III, delta prime subunit n=2 Tax=... 109 1e-22 UniRef50_Q081I0 DNA polymerase III, delta prime subunit n=14 Tax... 109 2e-22 UniRef50_Q47DZ6 DNA polymerase III, delta prime subunit n=1 Tax=... 108 2e-22 UniRef50_D0L216 DNA-directed DNA polymerase n=1 Tax=Halothiobaci... 108 3e-22 UniRef50_A9A090 DNA polymerase III, delta prime subunit n=1 Tax=... 108 3e-22 UniRef50_A6SZH8 DNA polymerase III delta' subunit n=2 Tax=Oxalob... 108 4e-22 UniRef50_Q0F3S2 DNA polymerase III subunit delta n=1 Tax=Maripro... 108 4e-22 UniRef50_Q482J4 DNA polymerase III, delta prime subunit n=1 Tax=... 107 5e-22 UniRef50_Q31HQ8 DNA polymerase III, delta prime subunit n=1 Tax=... 107 6e-22 UniRef50_UPI0001BCD908 DNA polymerase III, delta prime subunit n... 107 9e-22 UniRef50_Q3IHC2 Putative DNA polymerase III delta' subunit n=2 T... 106 9e-22 UniRef50_B1Y019 DNA polymerase III, delta prime subunit n=3 Tax=... 106 1e-21 UniRef50_C9RA67 DNA polymerase III, delta prime subunit n=1 Tax=... 106 1e-21 UniRef50_C9KNC0 DNA polymerase III, delta prime subunit n=1 Tax=... 105 2e-21 UniRef50_B2V5N0 DNA polymerase III, subunits gamma and tau n=4 T... 104 4e-21 UniRef50_B4RK44 DNA polymerase III subunit delta n=28 Tax=Neisse... 104 5e-21 UniRef50_C0WCP0 DNA polymerase III delta' subunit n=1 Tax=Acidam... 103 1e-20 UniRef50_Q1GTQ0 DNA polymerase III, delta prime subunit n=1 Tax=... 103 1e-20 UniRef50_Q2RMF7 DNA-directed DNA polymerase n=1 Tax=Moorella the... 103 1e-20 UniRef50_B0MFK9 Putative uncharacterized protein n=2 Tax=Clostri... 102 2e-20 UniRef50_Q3SIN0 DNA polymerase III delta prime subunit n=1 Tax=T... 102 2e-20 UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 T... 102 2e-20 UniRef50_C4V4M8 DNA polymerase III, delta prime subunit n=1 Tax=... 102 3e-20 UniRef50_Q6AQ60 Related to DNA polymerase III, delta subunit n=1... 101 3e-20 UniRef50_Q7UK75 DNA polymerase III, tau/gamma subunit n=1 Tax=Rh... 101 3e-20 UniRef50_Q12AK7 DNA-directed DNA polymerase n=5 Tax=Comamonadace... 101 4e-20 UniRef50_UPI00016C36A8 DNA polymerase III, delta prime subunit n... 100 7e-20 UniRef50_C1CYE9 Putative DNA polymerase III, subunits gamma and ... 100 8e-20 UniRef50_Q8EU50 DNA polymerase III delta subunit n=1 Tax=Oceanob... 100 8e-20 UniRef50_Q1IWF5 DNA polymerase III, subunits gamma and tau n=3 T... 100 1e-19 UniRef50_A8W216 Dihydropteroate synthase n=2 Tax=Bacillus RepID=... 100 1e-19 UniRef50_Q5P0G2 DNA-directed DNA polymerase III, delta subunit n... 100 1e-19 UniRef50_B0TB70 DNA polymerase iii delta prime subunit, putative... 100 1e-19 UniRef50_B0U3X0 DNA-directed DNA polymerase n=23 Tax=Xanthomonad... 100 1e-19 UniRef50_D1B9W0 DNA polymerase III, subunits gamma and tau n=1 T... 100 1e-19 UniRef50_C8W2Q8 DNA polymerase III, delta prime subunit n=1 Tax=... 99 1e-19 UniRef50_A5G697 DNA polymerase III, delta prime subunit n=7 Tax=... 99 2e-19 UniRef50_UPI0001BC30A0 DNA polymerase III, delta prime subunit n... 99 2e-19 UniRef50_C5SNN8 DNA polymerase III, delta prime subunit n=2 Tax=... 99 2e-19 UniRef50_UPI00016A2E07 DNA polymerase III subunit delta'''' n=1 ... 99 2e-19 UniRef50_A3UCJ6 DNA polymerase III, delta prime subunit n=1 Tax=... 99 3e-19 UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcu... 99 3e-19 UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 T... 98 3e-19 UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Ta... 98 5e-19 UniRef50_A1U0Y9 DNA polymerase III, delta prime subunit n=3 Tax=... 98 5e-19 UniRef50_C3X9N7 DNA polymerase III subunit delta n=2 Tax=Oxaloba... 97 6e-19 UniRef50_A0LEK6 DNA polymerase III, delta prime subunit n=1 Tax=... 97 7e-19 UniRef50_B3E2K6 DNA polymerase III, delta prime subunit n=2 Tax=... 97 8e-19 UniRef50_B9CMB1 DNA polymerase III subunit gamma/tau n=1 Tax=Ato... 97 1e-18 UniRef50_Q5WLY0 DNA polymerase III delta' subunit HolB n=3 Tax=B... 97 1e-18 UniRef50_A5WF95 DNA polymerase III, delta prime subunit n=1 Tax=... 96 1e-18 UniRef50_A6LMU3 DNA polymerase III, subunits gamma and tau n=1 T... 96 1e-18 UniRef50_C2D9N9 DNA polymerase III gamma and tau subunits n=1 Ta... 96 1e-18 UniRef50_D1CBV2 DNA polymerase III, delta prime subunit n=1 Tax=... 96 1e-18 UniRef50_C4GC81 Putative uncharacterized protein n=1 Tax=Shuttle... 96 2e-18 UniRef50_C7RR77 DNA polymerase III, delta prime subunit n=1 Tax=... 96 2e-18 UniRef50_UPI0000E8800C DNA polymerase III subunit delta n=1 Tax=... 96 2e-18 UniRef50_B9L1A1 DNA polymerase III tau and gamma subunits n=2 Ta... 96 2e-18 UniRef50_Q6MP27 DNA polymerase III delta' subunit n=1 Tax=Bdello... 96 3e-18 UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 T... 96 3e-18 UniRef50_C0GUE6 DNA polymerase III, subunits gamma and tau n=1 T... 96 3e-18 UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenel... 95 3e-18 UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=De... 95 3e-18 UniRef50_C0QI37 HolB n=1 Tax=Desulfobacterium autotrophicum HRM2... 95 3e-18 UniRef50_Q1NUY3 DNA-directed DNA polymerase n=5 Tax=Deltaproteob... 95 3e-18 UniRef50_C6NVZ6 DNA polymerase III delta prime subunit n=1 Tax=A... 95 4e-18 UniRef50_D2BNT0 DNA polymerase III, delta prime subunit n=4 Tax=... 95 4e-18 UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdema... 95 4e-18 UniRef50_A1HPS4 DNA polymerase III, delta prime subunit n=1 Tax=... 94 5e-18 UniRef50_B1I166 DNA polymerase III, delta prime subunit n=1 Tax=... 94 6e-18 UniRef50_B0K122 DNA polymerase III, delta prime subunit n=10 Tax... 94 6e-18 UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Co... 94 7e-18 UniRef50_Q0BT78 DNA polymerase III, delta' subunit n=4 Tax=Aceto... 94 8e-18 UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 94 9e-18 UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacte... 94 9e-18 UniRef50_C6NZM0 DNA polymerase III, delta prime subunit n=1 Tax=... 94 9e-18 UniRef50_D0LEI8 DNA polymerase III, delta prime subunit n=3 Tax=... 93 1e-17 UniRef50_B1C8Q2 Putative uncharacterized protein n=1 Tax=Anaerof... 93 1e-17 UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 T... 93 1e-17 UniRef50_C1ZK45 Putative uncharacterized protein n=1 Tax=Plancto... 93 1e-17 UniRef50_C4LLH9 DNA polymerase III, delta' subunit n=12 Tax=Cory... 93 1e-17 UniRef50_C0W271 DNA polymerase III, delta prime subunit n=4 Tax=... 93 1e-17 UniRef50_Q5M0Z8 DNA polymerase III delta prime subunit n=34 Tax=... 93 1e-17 UniRef50_C8WQ66 DNA polymerase III, subunits gamma and tau n=2 T... 93 1e-17 UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 T... 92 2e-17 UniRef50_A4E9Y5 Putative uncharacterized protein n=2 Tax=Collins... 92 2e-17 UniRef50_C2MCK6 DNA polymerase III, subunits gamma and tau n=2 T... 92 2e-17 UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lys... 92 2e-17 UniRef50_Q3A3X2 DNA polymerase III, delta prime subunit n=2 Tax=... 92 2e-17 UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 T... 92 3e-17 UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=D... 92 3e-17 UniRef50_UPI00016C0463 DNA polymerase III, delta prime subunit n... 92 3e-17 UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 T... 92 3e-17 UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Ta... 92 3e-17 UniRef50_C7D0N7 DNA polymerase III delta prime subunit n=38 Tax=... 92 3e-17 UniRef50_A6BZZ4 DNA polymerase III, tau/gamma subunit n=1 Tax=Pl... 92 3e-17 UniRef50_D0LQE3 DNA-directed DNA polymerase n=1 Tax=Haliangium o... 92 3e-17 UniRef50_A1WGM6 DNA-directed DNA polymerase n=10 Tax=Comamonadac... 92 4e-17 UniRef50_A3DH83 DNA polymerase III, delta prime subunit n=3 Tax=... 91 4e-17 UniRef50_B9L692 DNA polymerase III, subunits gamma and tau n=1 T... 91 4e-17 UniRef50_A8SS16 Putative uncharacterized protein n=1 Tax=Coproco... 91 4e-17 UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Be... 91 5e-17 UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=ce... 91 5e-17 UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 91 6e-17 UniRef50_Q1D8K6 DNA polymerase III, delta' subunit n=2 Tax=Cysto... 91 6e-17 UniRef50_C8NKG7 DNA polymerase III, delta' subunit n=3 Tax=Coryn... 91 6e-17 UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 T... 91 6e-17 UniRef50_B0SRY5 DNA polymerase III gamma subunit n=6 Tax=Leptosp... 91 6e-17 UniRef50_C8X0H8 DNA polymerase III, subunits gamma and tau n=1 T... 91 6e-17 UniRef50_D1AJH2 DNA polymerase III, subunits gamma and tau n=2 T... 91 7e-17 UniRef50_Q0EXX3 DNA polymerase III subunits gamma and tau n=1 Ta... 91 8e-17 UniRef50_A8U6Y2 DNA polymerase III subunit delta' n=1 Tax=Carnob... 91 8e-17 UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseria... 90 9e-17 UniRef50_A6LPM5 DNA polymerase III delta' subunit n=3 Tax=Clostr... 90 9e-17 UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 T... 90 9e-17 UniRef50_Q2Y982 DNA polymerase III, delta prime subunit n=2 Tax=... 90 1e-16 UniRef50_Q1ATA7 DNA polymerase III, subunits gamma and tau n=1 T... 90 1e-16 UniRef50_UPI0001BC5C50 DNA polymerase III subunits gamma and tau... 90 1e-16 UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 T... 90 1e-16 UniRef50_A8F5Y2 DNA polymerase III, subunits gamma and tau n=1 T... 90 1e-16 UniRef50_A6TJF9 DNA polymerase III, delta prime subunit n=2 Tax=... 90 1e-16 UniRef50_C8W7S8 DNA-directed DNA polymerase n=2 Tax=Atopobium Re... 90 1e-16 UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 T... 89 2e-16 UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymera... 89 2e-16 UniRef50_C5C8W4 DNA polymerase III, delta' subunit n=4 Tax=Micro... 89 2e-16 UniRef50_A6DD60 DNA polymerase III subunits gamma and tau n=1 Ta... 89 2e-16 UniRef50_Q67JB2 DNA polymerase III delta' subunit n=1 Tax=Symbio... 89 2e-16 UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydroba... 89 2e-16 UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 T... 89 2e-16 UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteri... 89 2e-16 UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 T... 89 2e-16 UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymera... 89 2e-16 UniRef50_Q1YNM8 DNA polymerase III, delta prime subunit domain p... 89 2e-16 UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n... 89 2e-16 UniRef50_B4UA58 DNA polymerase III, subunits gamma and tau n=3 T... 89 2e-16 UniRef50_C6PER6 DNA polymerase III, delta prime subunit n=1 Tax=... 89 2e-16 UniRef50_C8NXE7 DNA polymerase III, delta' subunit n=2 Tax=Coryn... 89 2e-16 UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 T... 89 3e-16 UniRef50_C9M8I9 DNA polymerase III gamma and tau subunit n=1 Tax... 89 3e-16 UniRef50_Q73FH7 DNA polymerase III, delta prime subunit n=68 Tax... 89 3e-16 UniRef50_Q30Q97 DNA polymerase III, tau subunit n=4 Tax=Epsilonp... 89 3e-16 UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Ta... 88 3e-16 UniRef50_C7MGG0 DNA polymerase III, gamma/tau subunit n=1 Tax=Br... 88 3e-16 UniRef50_C7ND36 DNA polymerase III, subunits gamma and tau n=3 T... 88 4e-16 UniRef50_B6IMK3 ATPase i n=1 Tax=Rhodospirillum centenum SW RepI... 88 4e-16 UniRef50_A9HZ16 DNA polymerase III subunit Tau n=6 Tax=Bordetell... 88 4e-16 UniRef50_Q11HZ8 DNA polymerase III, delta prime subunit n=4 Tax=... 88 4e-16 UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragm... 88 5e-16 UniRef50_B1L8C0 DNA polymerase III, subunits gamma and tau n=6 T... 88 5e-16 UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax... 88 5e-16 UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=C... 88 5e-16 UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 T... 88 5e-16 UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, puta... 88 5e-16 UniRef50_C0ET70 Putative uncharacterized protein n=1 Tax=Eubacte... 88 5e-16 UniRef50_B8FKB9 DNA-directed DNA polymerase n=1 Tax=Desulfatibac... 88 5e-16 UniRef50_B6BKU4 DNA polymerase III gamma and tau subunits DnaX n... 88 5e-16 UniRef50_B8FY25 DNA-directed DNA polymerase n=2 Tax=Desulfitobac... 88 6e-16 UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Ta... 87 6e-16 UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicr... 87 6e-16 UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 T... 87 6e-16 UniRef50_A9INK7 DNA polymerase III, delta' subunit n=11 Tax=Burk... 87 6e-16 UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 T... 87 7e-16 UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Ta... 87 7e-16 UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, puta... 87 8e-16 UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Ta... 87 8e-16 UniRef50_B0B7Q2 DNA polymerase III subunit gamma/tau n=15 Tax=Ch... 87 9e-16 UniRef50_Q1WSU8 DNA polymerase III, delta' subunit n=2 Tax=Lacto... 87 9e-16 UniRef50_C7GZE0 DNA polymerase III, subunit gamma and tau n=1 Ta... 87 9e-16 UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 ... 87 9e-16 UniRef50_B1VI07 DNA polymerase III, delta' subunit n=2 Tax=Actin... 87 9e-16 UniRef50_Q8NTJ5 ATPase involved in DNA replication n=8 Tax=Coryn... 87 9e-16 UniRef50_Q2STA6 DNA polymerase III gamma-tau subunits n=3 Tax=My... 87 1e-15 UniRef50_C0WUL6 DNA polymerase III subunit delta' n=3 Tax=Lactob... 87 1e-15 UniRef50_Q0APP2 DNA polymerase III, delta prime subunit n=1 Tax=... 87 1e-15 UniRef50_C3JWH0 DNA polymerase III subunit delta n=3 Tax=Coryneb... 87 1e-15 UniRef50_Q1NDV9 DNA polymerase III delta prime subunit n=1 Tax=S... 87 1e-15 >UniRef50_B3HUU9 DNA polymerase III subunit delta' n=6 Tax=Enterobacteriaceae RepID=B3HUU9_ECOLX Length = 278 Score = 471 bits (1212), Expect = e-131, Method: Compositional matrix adjust. Identities = 238/243 (97%), Positives = 239/243 (98%), Gaps = 1/243 (0%) Query: 92 AVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERL 151 A+R VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERL Sbjct: 37 AIR-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERL 95 Query: 152 LATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQ 211 LATLRSRCRLHYLAPPPEQYAV WLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQ Sbjct: 96 LATLRSRCRLHYLAPPPEQYAVIWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQ 155 Query: 212 ARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVP 271 ARETLCQALAYSV SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVP Sbjct: 156 ARETLCQALAYSVQSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVP 215 Query: 272 GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPV 331 GLV ELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPV Sbjct: 216 GLVVELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPV 275 Query: 332 PHL 334 PHL Sbjct: 276 PHL 278 >UniRef50_C9Y1I8 DNA polymerase III subunit delta' n=2 Tax=Cronobacter RepID=C9Y1I8_CROTZ Length = 342 Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust. Identities = 211/335 (62%), Positives = 254/335 (75%), Gaps = 1/335 (0%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M+WYPWLRP FE LV ++QAGRGHHA+LI ALPGMGDDALIYALSR+ +CQQPQG KSCG Sbjct: 8 MKWYPWLRPSFEHLVGNWQAGRGHHAVLIHALPGMGDDALIYALSRWRMCQQPQGQKSCG 67 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 CR CQLMQAGTHPDYY PEKGK+TLG+DA+R+++EKL + ARLGGAKVVW+ +AA L Sbjct: 68 ECRACQLMQAGTHPDYYQAEPEKGKSTLGIDAIRDISEKLYDRARLGGAKVVWIKEAAQL 127 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T+AAANALLKTLEEPP TWF L REPE+L ATLRSRC +LAPP +YA WL+RE+ Sbjct: 128 TEAAANALLKTLEEPPENTWFLLGCREPEQLPATLRSRCFSWHLAPPETRYAEAWLAREI 187 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ 240 + AALRL+ G+P AAL L Q + WQ R L + + ++ SGDW SLL ALNHEQ Sbjct: 188 QAEPSRINAALRLTGGAPAAALELLQPEQWQQRVALGEKITAALTSGDWLSLLPALNHEQ 247 Query: 241 APARLHWLATLLMDALKRHHGA-AQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 AP RLHWLA LMDALK HGA A + N D P LVA+LA SP+ QA+L + R++ Sbjct: 248 APFRLHWLAAFLMDALKWRHGAQAALVNTDYPVLVAQLAQRFSPAVTQAMLDSLFRCRDR 307 Query: 300 LMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL 334 L++V +NRELL+T+LLL E Y++P VLP HL Sbjct: 308 LLNVAAVNRELLLTELLLTWERYMRPDAVLPSYHL 342 >UniRef50_UPI000191451E DNA polymerase III subunit delta'''' n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. M223 RepID=UPI000191451E Length = 219 Score = 324 bits (830), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 167/198 (84%), Positives = 184/198 (92%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M+WYPWLRP +EKLV SYQAGRGHHALLIQALPGMGD+AL YALSRYLLCQQP+GHKSCG Sbjct: 1 MKWYPWLRPAYEKLVESYQAGRGHHALLIQALPGMGDEALCYALSRYLLCQQPEGHKSCG 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 HCRGCQLMQAGTHPDYYTL P+KGK++LGVDAVREV+EKL EH+RLGGAKVVW+ DAALL Sbjct: 61 HCRGCQLMQAGTHPDYYTLTPDKGKSSLGVDAVREVSEKLYEHSRLGGAKVVWIADAALL 120 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 TDAAANALLKTLEEPP +TWFFLA+ EP RLLATLRSRCRLH+LAPP E YA++WLSREV Sbjct: 121 TDAAANALLKTLEEPPEQTWFFLASPEPARLLATLRSRCRLHHLAPPSESYAMSWLSREV 180 Query: 181 TMSQDALLAALRLSAGSP 198 T SQ+ALL ALRL+AG P Sbjct: 181 TASQEALLTALRLNAGRP 198 >UniRef50_O69170 DNA polymerase III subunit delta' n=152 Tax=Enterobacteriaceae RepID=HOLB_YERPE Length = 340 Score = 323 bits (827), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 173/340 (50%), Positives = 222/340 (65%), Gaps = 6/340 (1%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M WYPWL + +LV + GRGHHALL+ +LPG G+DALIYALSR+L+CQQ QG KSCG Sbjct: 1 MNWYPWLNAPYRQLVGQHSTGRGHHALLLHSLPGNGEDALIYALSRWLMCQQRQGEKSCG 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C+LM AG HPD+Y L PEKGK+++GV+ VR++ +KL HA+ GGAKVVW+ A +L Sbjct: 61 ECHSCRLMLAGNHPDWYVLTPEKGKSSIGVELVRQLIDKLYSHAQQGGAKVVWLPHAEVL 120 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS--- 177 TDAAANALLKTLEEPP +T+F L +P LLATLRSRC YLA P + WL+ Sbjct: 121 TDAAANALLKTLEEPPEKTYFLLDCHQPASLLATLRSRCFYWYLACPDTAICLQWLNLQW 180 Query: 178 --REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAA 235 R++ + A+LAAL+LS G+P AA L Q + W R LC L ++ D SLL Sbjct: 181 RKRQIPVEPVAMLAALKLSEGAPLAAERLLQPERWSIRSALCSGLREALNRSDLLSLLPQ 240 Query: 236 LNHEQAPARLHWLATLLMDALKRHHGAAQV-TNVDVPGLVAELANHLSPSRLQAILGDVC 294 LNH+ A RL WL++LL+DALK GA + N D LV +LA+ + L + + Sbjct: 241 LNHDDAAERLQWLSSLLLDALKWQQGAGEFAVNQDQLPLVQQLAHIAATPVLLQLAKQLA 300 Query: 295 HIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL 334 H R QL+SV G+NRELL+T+ LL E L G +P L Sbjct: 301 HCRHQLLSVVGVNRELLLTEQLLSWETALSTGTYSTLPSL 340 >UniRef50_C0B0Z4 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C0B0Z4_9ENTR Length = 328 Score = 273 bits (698), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 154/331 (46%), Positives = 206/331 (62%), Gaps = 8/331 (2%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M WYPWL + +L++ YQ GRGHHALL+ A+ GMG +AL Y LSR+L+CQ QG KSC Sbjct: 1 MNWYPWLNQAYRQLISIYQEGRGHHALLLHAIEGMGGEALSYGLSRWLMCQNRQGLKSCN 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C+LM A THPD++ L EKGK+++G++AVR+VTEKL HA+ G +VVW+ D L Sbjct: 61 ECHSCRLMLAETHPDWHILQSEKGKSSIGIEAVRKVTEKLEHHAQQSGFRVVWIKDVEAL 120 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T+AAANALLKTLEEPP +T+F L + PE LLATLRSRC ++LA P Q+A WL +++ Sbjct: 121 TEAAANALLKTLEEPPKDTYFLLNCQHPEVLLATLRSRCFYYHLATPNLQHATHWLQQQL 180 Query: 181 -TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHE 239 + + AL LS +P AL+L + D W+ RE CQAL S+ D YS L LN + Sbjct: 181 PNIPYANSVTALNLSQNAPVLALSLLK-DEWKEREIFCQALYTSIQQHDLYSFLPQLNQD 239 Query: 240 QAPARLHWLATLLMDALKRHHGAAQV--TNVDVPGLVAELANHLSPSRLQAILG-DVCHI 296 A RL+ L+ ++ AQV N D L+ L+ S L I G C Sbjct: 240 NAERRLY-WLLSLLLDALKYQTNAQVYCVNQDQQALIMALSQWSSDILLSTIDGWKQC-- 296 Query: 297 REQLMSVTGINRELLITDLLLRIEHYLQPGV 327 R QLM++ +NRELL+ + LL E+ L + Sbjct: 297 RYQLMTIPALNRELLLVEQLLDWENQLTTKI 327 >UniRef50_Q2NU34 DNA polymerase III delta prime subunit n=2 Tax=Gammaproteobacteria RepID=Q2NU34_SODGM Length = 332 Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 152/323 (47%), Positives = 193/323 (59%), Gaps = 2/323 (0%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M+WYPWL + +++A YQ GHHALL+ + PG G+ L YALSR+L+C+QP G KSCG Sbjct: 1 MKWYPWLNGPYRQILARYQQASGHHALLLHSQPGNGEAPLCYALSRWLMCRQPDGSKSCG 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C+LM AG HPD+Y PEKG+ +LGVD +R + + + AR GG KVVW+ A LL Sbjct: 61 VCHSCRLMMAGNHPDFYQPEPEKGRQSLGVDNIRAIIDSVYGRARQGGVKVVWLPHAELL 120 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T+ AANALLKTLEEPP +T+F L + P RLL TLRSRC L P E + WL + Sbjct: 121 TEQAANALLKTLEEPPTDTYFLLGCQTPSRLLPTLRSRCLYWPLPAPDEALGLRWLRQAG 180 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALN-HE 239 + ALRL A +P AA AL Q WQ R LC AL + SGD+ +LL LN ++ Sbjct: 181 FDDPLSACTALRLCANAPLAAEALLQPGRWQERLALCAALYEAHVSGDFLTLLPVLNWYK 240 Query: 240 QAPARLHWLATLLMDALKRHHGA-AQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 + L+WL +LL DALK GA A + N D LVA LA L A Sbjct: 241 KDDGPLYWLLSLLTDALKWQQGAQASLVNADRAELVAALAARWPAGVLHAQWQLWLQCLR 300 Query: 299 QLMSVTGINRELLITDLLLRIEH 321 Q ++G+NRELL+T LL E Sbjct: 301 QWQEISGVNRELLLTHYLLNWEQ 323 >UniRef50_Q8K9J2 DNA polymerase III subunit delta' n=4 Tax=Buchnera aphidicola RepID=HOLB_BUCAP Length = 328 Score = 213 bits (543), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 173/308 (56%), Gaps = 2/308 (0%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M+WYPWL ++K++ ++ + HHA+LI+ GMG L++ +S++LLC +P+G C Sbjct: 1 MKWYPWLIKPYKKIIRLHERKKAHHAILIKTQKGMGVFKLVWFISKWLLCLKPKGTNFCD 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 +C GC+LM A HPD++T+ EK + VD++R + EK+ + A+ G K++++ + L Sbjct: 61 NCHGCKLMSANNHPDWHTIINEKN-DVFDVDSIRVINEKIFKRAQQGNNKIIFLPNVHKL 119 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T++A NALLK LEEPP + WFFL +L +TL+SRC L+ L P E+ ++ WL Sbjct: 120 TESAVNALLKILEEPPEKNWFFLIDYNYLKLHSTLKSRCFLYRLPLPLEKESLNWLKNNN 179 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ 240 + L +LR++ SP +A + D W R+ L ++L++S+ + +L L + Sbjct: 180 KKDNISNLTSLRINQDSPISAKNFIESDLWDERKNLYKSLSHSIKDKNLLKILPVLCKKN 239 Query: 241 APARLHWLATLLMDALKRHHGA-AQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 ++ W+ LL DA+K + ++ N D L+ + + L + R Sbjct: 240 TIMKIDWICLLLFDAVKTNFNERKKLINCDQIKLINFFSKKYNNILLNKSIRKWTKCRYI 299 Query: 300 LMSVTGIN 307 L SV+ IN Sbjct: 300 LSSVSSIN 307 >UniRef50_Q7VR24 DNA polymerase III, delta prime subunit n=2 Tax=Candidatus Blochmannia RepID=Q7VR24_BLOFL Length = 333 Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 110/319 (34%), Positives = 162/319 (50%), Gaps = 4/319 (1%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL + +++ SY +GHHALL+ + G+D LI +++R+L+C+ K C C Sbjct: 4 YPWLNTIYNQILFSYDIKKGHHALLLYSTQNNGEDILINSIARWLICKNSFKIKYCNSCS 63 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C LM G HPDYY L + ++GVD++R+ + + + +K+V++ LTD Sbjct: 64 DCYLMNIGQHPDYYQLDLKYQAQSIGVDSIRDCIDSIYRFTQYSKSKIVFIQYIEYLTDE 123 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 A N LLK LEEPP T+FF +R+ + TL SRC + PP E + WL + Sbjct: 124 AVNMLLKILEEPPDNTYFFFRSRKIINIPLTLLSRCVKWVVTPPVESLGIEWLINNQKLD 183 Query: 184 QDALL-AALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAAL-NHEQA 241 L ALRL+ GSP A + Q D W+AR LC + + +G++ LL L N E Sbjct: 184 NILFLTTALRLNYGSPIEAKVMLQSDQWKARVELCNHINDVIKNGNFLQLLPILKNKEHR 243 Query: 242 PARLHWLATLLMDALKRHHGAAQ--VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 + WL TLL+DALK G + N+D L+ ++ + L L + Sbjct: 244 YIFISWLITLLVDALKYRQGVKEKFFINLDQLQLILNISVYWKVLSLHNQLSQWIILFYY 303 Query: 300 LMSVTGINRELLITDLLLR 318 IN ELL+T LL Sbjct: 304 FQRFDNINHELLLTCRLLN 322 >UniRef50_P43748 DNA polymerase III subunit delta' n=23 Tax=Pasteurellaceae RepID=HOLB_HAEIN Length = 327 Score = 196 bits (498), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 112/317 (35%), Positives = 173/317 (54%), Gaps = 3/317 (0%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL P + ++ ++ G GHHA+LI+A G+G ++L AL++ ++C QG K CG C Sbjct: 5 YPWLMPIYHQIAQTFDEGLGHHAVLIKADSGLGVESLFNALAQKIMCV-AQGDKPCGQCH 63 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C LMQA +HPDY+ L+P GK+ +GVD VR++ E + +HA+ G KVV+V A LT+A Sbjct: 64 SCHLMQAHSHPDYHELSPINGKD-IGVDQVRDINEMVAQHAQQNGNKVVYVQGAERLTEA 122 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANALLKTLEEP T+F L LLAT+ SRC++ L+ P E+ A WL + + Sbjct: 123 AANALLKTLEEPRPNTYFLLQADSSASLLATIYSRCQVWNLSVPNEEIAFEWLKSKSAVE 182 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPA 243 +L AL ++ G P AL Q + R+ + LL + E+ Sbjct: 183 NQEILTALAMNLGRPLLALETLQEGFIEQRKNFLRQFWVFYRRRSPLELLPLFDKERYVQ 242 Query: 244 RLHWLATLLMDALKRHHGAAQVTNV-DVPGLVAELANHLSPSRLQAILGDVCHIREQLMS 302 ++ W+ L D LK V D+ + + ++ + L + + +R L++ Sbjct: 243 QVDWILAFLSDCLKHKLEIDSHRQVADLGRGIEQFSDEQTALGLLQAIKIMQKVRSDLLT 302 Query: 303 VTGINRELLITDLLLRI 319 + G+N EL++ D L R+ Sbjct: 303 INGVNVELMLLDGLTRL 319 >UniRef50_B8F7F9 DNA polymerase III subunit delta n=9 Tax=Pasteurellaceae RepID=B8F7F9_HAEPS Length = 329 Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/323 (34%), Positives = 168/323 (52%), Gaps = 5/323 (1%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M YPW + ++ +++Q GRGHHALL + G+G + LI + +LLC PQ ++ CG Sbjct: 1 MNLYPWHKQTHHQITSTFQQGRGHHALLFKTDSGLGTEQLIRHFAHWLLCHTPQQNQPCG 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C+ C L Q+G HPD++ LAP K+ +G+D VRE+T KL + A+ GG VV++ A L Sbjct: 61 QCKSCLLWQSGNHPDFHLLAPIDDKD-IGIDQVREITAKLQQFAQQGGNAVVYLAGAERL 119 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T+AAANALLKTLEEP +F L +LAT++SRC+ + P WL E Sbjct: 120 TEAAANALLKTLEEPNQNVYFLLEAPLQATMLATIQSRCQTWLVHTPESSQTFEWLQTEC 179 Query: 181 TMSQDA-LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNH- 238 +Q + + ALRL P + D +R+T Q S D + L +A + Sbjct: 180 PTAQSSEIETALRLCHNRPLLCKTFLETDRLPSRKTFLQTFWRFYKSRDVFLLFSAFDKE 239 Query: 239 -EQAPARLHWLATLLMDALK-RHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHI 296 EQ +L WL + DALK + A N D+ + + L+ L + Sbjct: 240 PEQVQQQLEWLGSFFSDALKAKMQIATGWLNPDLQNGILPFSQQLTAQGLLKGHQIIQQT 299 Query: 297 REQLMSVTGINRELLITDLLLRI 319 + L V +N+EL++ D L ++ Sbjct: 300 QRDLREVNAVNQELMLLDCLSKL 322 >UniRef50_A6FHN9 HolB n=1 Tax=Moritella sp. PE36 RepID=A6FHN9_9GAMM Length = 323 Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 103/322 (31%), Positives = 170/322 (52%), Gaps = 4/322 (1%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL P +EK AGR HHAL I + GMG + L++ LLC++P G + C C Sbjct: 3 YPWLLPYWEKQQTQMTAGRLHHALFITSASGMGKLSYAQTLAQTLLCKEPIGWEPCHRCH 62 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 CQL + HPDYY ++ E GK +GVD +R +++KLNEH++LGG KVV + A A Sbjct: 63 PCQLFETSVHPDYYLVSTEPGK-VIGVDRIRHISQKLNEHSQLGGNKVVIIEHAESFNLA 121 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 +ANALLKTLEEP ++ L ++L T+ SRC+ +L P EQ ++ WL ++ + Sbjct: 122 SANALLKTLEEPSNGSYLILLAENKSQVLPTIYSRCQKLHLPAPAEQESMAWLQQQFPI- 180 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPA 243 + L A+R++ G+P L+ + R+ + + + L + ++ Sbjct: 181 ESPTLTAIRINHGAPLHTLSYLNNGDDDLRKEIFSNITLLTTQPAAITRLCEIISDRTLE 240 Query: 244 RLHWLATLLMDALKRHHGAA--QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 +L WL +L+D K G + + N D + + LS ++ + ++ +R+ LM Sbjct: 241 KLSWLQFILLDLQKVKRGVSIDYIVNTDQLEWLTHFSTQLSQDKITQLQSELTALRQLLM 300 Query: 302 SVTGINRELLITDLLLRIEHYL 323 + E L+ L++++ Y+ Sbjct: 301 QNNNLTAETLVLSFLIKLKRYI 322 >UniRef50_C6APV7 DNA polymerase III subunit delta' n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6APV7_AGGAN Length = 356 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 125/351 (35%), Positives = 183/351 (52%), Gaps = 41/351 (11%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL P + K+ ++ GHHALL++A G+G L AL++ L+C P G ++CG C Sbjct: 5 YPWLAPTYHKITGAFDEALGHHALLLRADVGLGVAQLCEALAQRLMCLTPNGDEACGQCH 64 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C LMQA +HPD+ +AP + K+ +G+D +R + E+ +HA+ G KV+++ A LT+A Sbjct: 65 SCHLMQANSHPDFQHIAPIENKD-IGIDQIRAMNEQATQHAQQNGNKVIYIEQAHRLTEA 123 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANA+LKTLEEP T+F L LL T+ SRC++ L PP + A+ WL +V+ Sbjct: 124 AANAILKTLEEPRPNTYFILHCDIQTALLPTIYSRCQVWNLLPPETEVALQWLQSQVSAE 183 Query: 184 Q--------------------DA-------LLAALRLSAGSPGAALALFQGDNW-QARET 215 DA + ALR++ G P ALA+ Q + Q RE Sbjct: 184 TLEMLFASSPTRLLTPDGAIGDANVQNPLDFVTALRVNYGRPLLALAMLQQNQLEQRREF 243 Query: 216 LCQA-LAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTN----VDV 270 L Q + Y S A + A +L WL L DALK QV N D+ Sbjct: 244 LRQFWVFYRRRSPLELFPFFAKEKDMALQQLDWLLAFLSDALK---AKLQVKNGWICQDI 300 Query: 271 PGLVAELANHLS-PSRLQAILGDVCH-IREQLMSVTGINRELLITDLLLRI 319 V + A LS P+ LQA G++ +R L ++ +N+EL++ D L R+ Sbjct: 301 ERGVIQFAQGLSAPALLQA--GNIVQKVRSDLQTINAVNQELILLDGLTRL 349 >UniRef50_A0KKI0 DNA polymerase III, delta' subunit n=2 Tax=Aeromonas RepID=A0KKI0_AERHH Length = 315 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 106/285 (37%), Positives = 145/285 (50%), Gaps = 7/285 (2%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL PD+ L + AGR HA L+ PG+G + L L+R LC +P+ + CG C Sbjct: 2 YPWLIPDWHALSQTAAAGRLGHAWLLLGDPGLGKEQLAEQLARLHLCHRPERGEPCGQCH 61 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 CQL + G HPD TL E T+GV+A+RE+ +L A+LG KVV + DA +T++ Sbjct: 62 SCQLFEKGHHPDLGTLTTES--KTIGVEAIREICSRLQNSAQLGRGKVVIIPDAERMTES 119 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANALLKTLEEP ++ L + RLL T+ SRC H P E V WL+ + Sbjct: 120 AANALLKTLEEPAGDSLLLLIASQVSRLLPTILSRCHKHVCQLPAEGETVRWLAEQ---G 176 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPA 243 A LA +R+ G+P L + AR L ++ + + + L Sbjct: 177 HQATLAQVRICQGAPLRVLRYIEEQQDSARRDLLESFLALAQTPTRANHVCGLLASDTQV 236 Query: 244 RLHWLATLLMDALKRHHGAA--QVTNVDVPGLVAELANHLSPSRL 286 RLHWL L DALK G Q+ D+ L +LA S +L Sbjct: 237 RLHWLQLFLCDALKTQAGCGHHQLAMPDLTALSLQLAELHSSEKL 281 >UniRef50_Q89AG8 DNA polymerase III subunit delta' n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=HOLB_BUCBP Length = 336 Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 95/338 (28%), Positives = 171/338 (50%), Gaps = 19/338 (5%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M YPWL+ +++++ + +GHH++++++ +G L +S +LLCQ+ +KS Sbjct: 1 MNLYPWLQHSYKQIIYPHYINKGHHSIILESHKNIGITCLAKHISLWLLCQKK--NKSIY 58 Query: 61 HCR---GCQLMQAGTHPDYY-----TLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 HC+ CQLM + HPD++ T + T+GV+ VR T + A+ G K+V Sbjct: 59 HCKTCHSCQLMNSKNHPDWHYFGSNTCLSKNSSKTIGVNEVRNFTNTIFNSAQQGQNKIV 118 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 ++ + LT+ A N+LLK +EEPP T+F L P +++ TLRSRC +H L P ++ Sbjct: 119 YIPNIKKLTEFAINSLLKIIEEPPQNTYFLLINYLPHKIITTLRSRCIIHNLYGPTKENR 178 Query: 173 VTWLSRE-VTMSQD---ALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGD 228 + WL + + +Q ++L + +S S F +Q R + L S + Sbjct: 179 IEWLKEQNINTNQKIHMSMLYSNEISFISKCKHSLFFL---YQERLNFFETLLTSFQEKN 235 Query: 229 WYSLLAALNHEQAPARLH-WLATLLMDALK-RHHGAAQVTNVDVPGLVAELANHLSPSRL 286 + +L LN+++ ++ W+ +++D++K +H + N D ++ LA++ S L Sbjct: 236 FLKMLNVLNNKKCLDQIFIWICGIILDSIKWKHDINTIIINTDQTKIIQILASNFSILSL 295 Query: 287 QAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 + + ++ GIN ELL LL E L Sbjct: 296 DNSYKSWIYCYNNIKNIPGINIELLFVKQLLYWEEILN 333 >UniRef50_A1STW9 DNA polymerase III, delta prime subunit n=2 Tax=Psychromonas RepID=A1STW9_PSYIN Length = 342 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 118/336 (35%), Positives = 169/336 (50%), Gaps = 22/336 (6%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PWL P F++L+ ++QAGR HALL G+G L L++YLLC Q SCGHC Sbjct: 13 PWLTPVFKQLINTFQAGRFAHALLFTGCAGIGKFELGKHLAKYLLCSNKQA-ASCGHCHS 71 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 CQL +A H D++ L E K ++G++ VR + KLNE LG KVV + +A LLT AA Sbjct: 72 CQLFEAQNHLDFHLLQNETNK-SIGIEQVRNLIAKLNERPHLGDNKVVIIKNANLLTTAA 130 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 ANALLKTLEEP ++ L TR +L+ TL SR + +L P + WL+ + Q Sbjct: 131 ANALLKTLEEPQGNSYLILLTRSHHQLMPTLLSRVQHTHLHTPEDTELFAWLALQGFNIQ 190 Query: 185 DALLAALRLSAGSPGAALALFQ------GDNWQARETLCQALAYSVPSGDWYSLLAALNH 238 D + LRL SP A L+ Q GD+ R + L Y + + + Sbjct: 191 D--IGLLRLYQNSPFALLSHLQSVRAETGDD--ERRECVEGLFYLLSHPETLFTFSVFLA 246 Query: 239 EQAPARLHWLATLLMDALKRHHGAA------QVTNVDVPGL----VAELANHLSPSRLQA 288 EQA RL L LL D K Q+ + V G + N +S L+ Sbjct: 247 EQAEQRLLLLFYLLHDLHKLKLAECIAGNEIQLESDAVYGFAYPQLQIWKNRISLKSLRF 306 Query: 289 ILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 + ++ R L+ + + +ELLI LL++I++ + Sbjct: 307 LCDELLQTRNLLVEHSALKKELLINALLIKIKNEFK 342 >UniRef50_Q3JAL5 DNA polymerase III, delta prime subunit n=2 Tax=Nitrosococcus oceani RepID=Q3JAL5_NITOC Length = 337 Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 108/323 (33%), Positives = 164/323 (50%), Gaps = 9/323 (2%) Query: 3 WYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGH 61 +YPW + + L+AS A R HA+L+ GMG + L + L C+ PQ G CG Sbjct: 4 FYPWHQSHWNSLMASQIAKRMPHAILLMGPEGMGKRSFASNLIQALSCEYPQKGGHGCGS 63 Query: 62 CRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 C GC+L AG+HPD TL P +GK T+ V+ +R++ L AR K V + A +T Sbjct: 64 CAGCRLQLAGSHPDNLTLFPREGKQTISVNQIRQLHSHLALKARQSLFKTVIIYPAEEMT 123 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV- 180 +AAN+LLK LEEPP T L T RL T+RSRC+ + Q WL + + Sbjct: 124 LSAANSLLKILEEPPGRTVLLLITSASLRLPITIRSRCQQLFFTISKSQEVKMWLQQRLP 183 Query: 181 -TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSG--DWYSLLAALN 237 +M+ DA + LRLS G P AL + + R+ L +S+ G D + ++ + Sbjct: 184 PSMNLDA-VTLLRLSGGGPLRALEYVEQNFLFYRKEFINNL-FSLTQGKLDLFEMVRSCL 241 Query: 238 HEQAPARLHWLATLLMDALKRHHGAAQ--VTNVDVPGLVAELANHLSPSRLQAILGDVCH 295 + L+W++TL+ D ++ G ++ + N DV + LA S L A+L Sbjct: 242 KDNLGEPLYWISTLVEDTIRLRSGVSKRFLVNHDVANSLQLLARRASFEMLFALLKKASC 301 Query: 296 IREQLMSVTGINRELLITDLLLR 318 RE IN +LL+ ++L++ Sbjct: 302 NREIWKGQININPQLLLEEILIQ 324 >UniRef50_A7K5T9 DNA polymerase III delta prime subunit n=12 Tax=Vibrio RepID=A7K5T9_VIBSE Length = 320 Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 112/324 (34%), Positives = 170/324 (52%), Gaps = 14/324 (4%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL+P ++ L ++ R ALL+Q+ G+G + LI S+ LLCQ ++CG C Sbjct: 5 YPWLQPVWDNLKVGLESDRIPGALLLQSEQGLGIEKLIEFFSQALLCQN-YASEACGFCH 63 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 CQL Q+ HPD + + PEK + VD VR E ++L G ++ + A + ++ Sbjct: 64 SCQLNQSHNHPDLHWIKPEKEGKAITVDQVRACNRLAQESSQLNGYRLFVIEPADSMNES 123 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 A+NALLKTLEEP A+ F L T ERLL T+RSRC+ +APP + A+ W+ + + Sbjct: 124 ASNALLKTLEEPGAKCLFLLVTHNQERLLPTIRSRCQHWVVAPPSTEQAMQWMREQ--GA 181 Query: 184 QDALLAALRLSAGSPGAAL-ALFQG--DNWQARE-TLCQALAYSVPSGDWYSLLAALNHE 239 Q AL+L+ GSP L AL G D + A E T +A+ S P+ D S A+L + Sbjct: 182 QQVPAYALKLNMGSPIKTLDALNNGDLDAYLAFERTFIKAM--SSPASD-ISECASLMAK 238 Query: 240 QAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 + L W LL DA K G ++ +PG + N+ + L + + ++ Q Sbjct: 239 HSEQSLDWAWYLLTDAQKVQFGVSEAQM--LPGAIKFQPNNY--NGLYSSAKALMDLKAQ 294 Query: 300 LMSVTGINRELLITDLLLRIEHYL 323 + + G+N ELL + L+ L Sbjct: 295 VQAFPGLNLELLSMNWLIESREVL 318 >UniRef50_C5BU66 DNA polymerase III subunit delta prime n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BU66_TERTT Length = 339 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 100/325 (30%), Positives = 162/325 (49%), Gaps = 13/325 (4%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPW + + G HA+L+Q + G+G ++L A++ +L+C P +CG C+ Sbjct: 8 YPWQNTYWHQFAGQVTQGHLPHAILLQGVAGIGTESLARAMAEFLMCSSPVEQAACGQCK 67 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C+L+Q+ HPD + L+PE+ + VD VR++TE + + ++ GG K+V + A + A Sbjct: 68 VCRLLQSHNHPDLFLLSPEEKSVVIKVDQVRQLTEFVAKTSQQGGRKLVIIEPAEAMNIA 127 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANALLK EEP +T F L RLL T+RSRC H L P AV+WL TM Sbjct: 128 AANALLKCFEEPSGDTVFILVCHHANRLLPTIRSRCACHTLPVPERALAVSWLE---TMG 184 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAAL------N 237 ++ L + G+P A + D +++ C+ L ++ + + +A Sbjct: 185 VESAALLLDETHGAPLTAHQWSRDDVIASQDKACELLVAALQTQKPVTTVAGTLAGECSG 244 Query: 238 HEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIR 297 E A ++WL L+ + R G+ + LV +A LS L + C + Sbjct: 245 LELAELLINWLEQLIRE---RTRGSRRSLLAHWEPLVG-VAQALSTVELFKLREVYCQRK 300 Query: 298 EQLMSVTGINRELLITDLLLRIEHY 322 QL++ +N ++I DLLL + Y Sbjct: 301 AQLLANPNLNANMVIEDLLLEWQRY 325 >UniRef50_A1WSZ0 DNA polymerase III, delta prime subunit n=1 Tax=Halorhodospira halophila SL1 RepID=A1WSZ0_HALHL Length = 351 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/263 (38%), Positives = 138/263 (52%), Gaps = 7/263 (2%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH--KSCGHC 62 PWL P+ ++L+ + GR HHALL+ G+G L L+R LLCQ +G + CG C Sbjct: 22 PWLLPELDRLLTLHDQGRLHHALLLTGRTGLGKRLLAGVLARALLCQADEGGGARPCGQC 81 Query: 63 RGCQLMQAGTHPDYYTLAPEK--GKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 RGC L G+HPD TL+P + + VD+VR + + L+ A+ GG++V + L Sbjct: 82 RGCHLTGGGSHPDLRTLSPSSRGERGEIVVDSVRGLVDFLHLSAQRGGSRVAVIVPCDRL 141 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 AAAN+LLKTLEEPP + LAT P RL T+RSRC + L PP A WL+ Sbjct: 142 NRAAANSLLKTLEEPPPGVFLILATGRPGRLPPTVRSRCTVRGLTPPAWDAARRWLAERA 201 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ 240 ++ + AL L+ G P A + + E+L Q L GD + A E Sbjct: 202 GGAEGRVDKALALAGGMPLTAEQILHEQGLEGYESLLQQLHRLSAGGD--PVKEAEAWEG 259 Query: 241 APARLHWLAT-LLMDALKRHHGA 262 AP L T +L D L++ HGA Sbjct: 260 APEALADAVTAILADLLRQRHGA 282 >UniRef50_Q0VQM5 DNA polymerase III, delta prime subunit n=2 Tax=Alcanivorax RepID=Q0VQM5_ALCBS Length = 335 Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/318 (33%), Positives = 157/318 (49%), Gaps = 12/318 (3%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW +L+ + GR HALL+ G+G L +L++ LLC++P CGHC+G Sbjct: 13 PWHSDAMAQLLDQHARGRLPHALLLSGPKGIGKLRLAESLAQTLLCEKPSAGLPCGHCQG 72 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 CQL AGTHPD Y L+PE+ T+ +D VR++ A+ G +V ++ A L A Sbjct: 73 CQLSTAGTHPDLYRLSPEEKSKTIKIDQVRKLVAFATRTAQYSGYRVAIISPAEALNRNA 132 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 NALLKTLEEP +T L + +P LL T+RSRC+ L P +++A+ WL +V S Sbjct: 133 QNALLKTLEEPGTQTLLLLVSDQPTLLLPTIRSRCQQRILPLPVKEHALQWLQSQVGESA 192 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPAR 244 +LL A + G+P ALAL Q + + R L L + + + + P Sbjct: 193 ASLLDA---AQGAPLRALALEQAEWFADRTRLLDTLVRVAEGRQSVAQASPVLAKHDPTE 249 Query: 245 LH-----WLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 + WL+ +L + Q ++ + L+ L + P+RL V R Sbjct: 250 MASVIYGWLSR----SLNQRFSGQQSSDALLAPLLERLNKAVPPARLLRAAQRVLEGRRA 305 Query: 300 LMSVTGINRELLITDLLL 317 L+S N+ELL LL Sbjct: 306 LLSGANPNKELLYEQWLL 323 >UniRef50_A0YGP8 DNA polymerase III subunit delta n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGP8_9GAMM Length = 334 Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 115/212 (54%), Gaps = 1/212 (0%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW + +++ + A R HA L+ PG G + +L YL+CQ P +CG CR Sbjct: 13 PWQNEQWHRIIDLHGAERLPHAFLLAGSPGTGKHRFLLSLCHYLMCQAPLAGAACGKCRQ 72 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 CQL+ G HPD LAPE+ + VD VR V E L+ ++ GG K+ +T A + A Sbjct: 73 CQLLATGDHPDLKWLAPEEKSRQIKVDQVRAVVEFLSHTSQQGGYKIGVITPAEAMNINA 132 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 ANALLK+LEEP +T FL + P +LL T+RSRC+ PPE+ ++ WLS V Q Sbjct: 133 ANALLKSLEEPSDKTLLFLVSDSPGQLLPTIRSRCQQVSFPVPPEEESLQWLS-TVVPGQ 191 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETL 216 LR ++G P AL L D + R+ L Sbjct: 192 AETNTLLREASGQPLTALDLLSNDGLERRKQL 223 >UniRef50_A9NBZ0 DNA polymerase III, delta' subunit n=6 Tax=Coxiella burnetii RepID=A9NBZ0_COXBR Length = 319 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 149/292 (51%), Gaps = 3/292 (1%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPW + +++++ Y+ GR HALL+ PG+G A++ ++LC+ G CG CR Sbjct: 3 YPWQQTQWQEILTRYRQGRLPHALLLTGSPGLGKFDFAKAVAEFILCEAQDGG-VCGSCR 61 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 GCQL +AG HPD++ L PE+ + + +RE+ LN+ A+ G +V + A + A Sbjct: 62 GCQLFRAGNHPDFFKLIPEEKSKNIKIAQIRELMNALNQTAQHDGYQVAIIYPAEAMNRA 121 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANA LKTLEEP + + L + +P LL T+ SRC+ + V WL +++ Sbjct: 122 AANAFLKTLEEPCGQIFLILISHQPGALLPTILSRCQRLAFTASANEPTVQWLQKQIEGD 181 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQ-ALAYSVPSGDWYSLLAALNHEQAP 242 + + L ++ +P AL L + + R+ L Q + + + S+ L E P Sbjct: 182 RREAIQLLTAASYAPLQALQLKSLNYTEVRDRLLQLIINLTAQRENAVSVAGTLLKEDLP 241 Query: 243 ARLHWLATLLMDALKRHHGAAQ-VTNVDVPGLVAELANHLSPSRLQAILGDV 293 L L + MD L+ A V N D L+ EL+ L +++ +L ++ Sbjct: 242 FVLQVLILIAMDLLRLQLKATNFVVNSDQLILLQELSTALPQNKIMLLLQEL 293 >UniRef50_B3PHI9 DNA polymerase III, delta prime subunit n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI9_CELJU Length = 337 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 106/318 (33%), Positives = 156/318 (49%), Gaps = 23/318 (7%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPW ++++L A + HAL++ G+G AL++ LLCQ P+ +CG CR Sbjct: 9 YPWQLGEWQQLAQLIAARKLPHALMLAGPRGIGKRHFAEALAQLLLCQAPREGGACGQCR 68 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 GC+L +A THPD L PE+ + VD VRE+T+ L + A+L G KVV + A + Sbjct: 69 GCELNKAATHPDLLWLEPEEAGKAIKVDQVRELTDALGKTAQLSGYKVVVLEPAEAMNTN 128 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT-- 181 AANALLK+LEEP A T L + P +L T+RSRC+L +A P ++ V WLS + Sbjct: 129 AANALLKSLEEPAANTLLILVSHTPSAVLPTIRSRCQLRAMAMPRQEQVVRWLSPLLVGR 188 Query: 182 -MSQDALLAALRLSAGSPGAALALFQGD---------NWQARETLCQALAYSVPSGDWYS 231 + D LL+A R G+P AL+L +GD R +L Q A + + +W++ Sbjct: 189 DIPADELLSAAR---GAPLIALSLLEGDALEQREQQLQQLTRMSLGQLSAIEL-AANWHT 244 Query: 232 LLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILG 291 AP + W L + G P + E + S L L Sbjct: 245 -------GDAPGLMEWFLGFLHTLARWRAGVDDPQAQRWPTELRERLQGVELSLLHRYLE 297 Query: 292 DVCHIREQLMSVTGINRE 309 V H + L+S N++ Sbjct: 298 KVLHAKRLLLSGANPNKQ 315 >UniRef50_A5F6P8 DNA polymerase III, delta prime subunit n=35 Tax=Vibrio RepID=A5F6P8_VIBC3 Length = 324 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 105/319 (32%), Positives = 158/319 (49%), Gaps = 12/319 (3%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL P ++ A AG+ A LIQA G+G ++L+ ++R L+C Q + CG C Sbjct: 8 YPWLVPVWQPWQAGLAAGKISSATLIQASEGVGVESLVELMARTLMCTSSQS-EPCGFCH 66 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C LMQ+G HPD++ + PEK ++ V+ +R++ E ++L G +++ + A + ++ Sbjct: 67 SCGLMQSGNHPDFHVVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPADAMNES 126 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 +ANALLKTLEEP F L T + LL T+ SRC+ L P V WL + + Sbjct: 127 SANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVVEWLKGQGITT 186 Query: 184 QDALLAALRLSAGSPGAALA-LFQGDNWQARETLCQALAYSVPSGDWYSLLA--ALNHEQ 240 AL L A SP A + +G + E Q + + SGD + L AL Sbjct: 187 PA---YALHLCADSPLKTRAFMLEGGAEKYHELESQLM--NALSGDVNAQLKCIALIDAD 241 Query: 241 APARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 L+W+ +L DA K H G Q P A LA + S+L + + EQL Sbjct: 242 LTTHLYWVWCVLTDAQKIHFGVQQDY---YPPASAALAGRFTYSKLHVQTASLERLMEQL 298 Query: 301 MSVTGINRELLITDLLLRI 319 +G+N ELL+ L + Sbjct: 299 NQFSGLNTELLLLQWLYQF 317 >UniRef50_D0IB97 DNA polymerase III delta prime subunit n=7 Tax=Vibrionaceae RepID=D0IB97_VIBHO Length = 322 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 161/315 (51%), Gaps = 6/315 (1%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPW + ++ R HHA+L+ A G G L L++ +LC+ + CG C Sbjct: 6 YPWHQEIWQSWQQLLGQDRLHHAILLSAPTGSGKIELAAMLAKTILCKNGVT-EPCGICH 64 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 CQL A THPD++ L PE LGVDA+R + E ++LGG +V+ + +A + +A Sbjct: 65 SCQLFDADTHPDFHWLKPEAEGKQLGVDAIRAGNQYAWETSQLGGQRVILIQNADRMGEA 124 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANALLKTLEEPP+ F L ++ + +L T+ SRC P E W+ E + Sbjct: 125 AANALLKTLEEPPSHCHFILLSQSMDTMLPTVVSRCNKWKPKLPEESVVKRWVEGE--LF 182 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALA-YSVPSGDWYSLLAALNHEQAP 242 + L LR++ G+P AA A + + + + A + + +++ + Q Sbjct: 183 ESVPLQVLRINRGAPLAAKAFVENGSVARHKAVVDGFASFVIQKQGLFTVTEQVVKAQQE 242 Query: 243 ARLHWLATLLMDALKRHHGAAQ-VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 L WL+ LL+D +K G+ + + + D + LA+ L S++ A L + ++ +L Sbjct: 243 G-LQWLSFLLLDVVKIQQGSDEAIVHCDEMKTLQTLASSLPHSQVMAQLMGLNRMKAELA 301 Query: 302 SVTGINRELLITDLL 316 TG+N ELLI+ L Sbjct: 302 RHTGLNSELLISRWL 316 >UniRef50_Q1N4U3 DNA polymerase III subunit delta n=1 Tax=Bermanella marisrubri RepID=Q1N4U3_9GAMM Length = 328 Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 94/318 (29%), Positives = 159/318 (50%), Gaps = 11/318 (3%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PWL+ ++ L + R HA+L+ G+G + ++ +LC Q + CG C Sbjct: 8 PWLQSQWQTLSQQLSSQRLGHAVLLTGQQGVGKRVFLKEFAQLVLCHQGEQQTPCGECAS 67 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C+L AG HPD+ T+ PE+ + +D +R VT+ +N A G KVV + A ++ A Sbjct: 68 CRLFTAGNHPDFITVEPEETGKAIKIDQIRRVTDFVNTTASQGQRKVVLLGPAEVMNINA 127 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE-QYAVTWLSREVTMS 183 +NALLK+LEEP ++ L + +P RLLAT++SRC+ Y AP P+ Q + WL + Sbjct: 128 SNALLKSLEEPSSQVTMLLYSHQPSRLLATIKSRCQ-QYSAPTPKFQDGLMWLQQ--NSQ 184 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALA-YSVPSGDWYSLLAALNHEQAP 242 + L + LRL+ G+P + + + D CQ + + S W +++ + Sbjct: 185 ESGLDSLLRLAQGAPLKVIEMIEQDVHVQYMQFCQDMQDLANHSVVWQGVVSKWKNWSVE 244 Query: 243 ARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE---LANHLSPSRLQAILGDVCHIREQ 299 L W LL+D + G V + +P L + ++ +S + IL + ++ Sbjct: 245 YLLDWFYGLLLDVQRCKSG---VQDRLIPELNMQTELVSKRMSVAEADGILSAIYESKKA 301 Query: 300 LMSVTGINRELLITDLLL 317 ++S + N LLI LL+ Sbjct: 302 VVSGSNPNPTLLIERLLV 319 >UniRef50_A6D7X6 DNA polymerase III subunit delta' n=1 Tax=Vibrio shilonii AK1 RepID=A6D7X6_9VIBR Length = 318 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 161/323 (49%), Gaps = 16/323 (4%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M+ YPWL P + KL + + A+LIQA G+ +++I L+CQ + + CG Sbjct: 1 MQVYPWLVPTWSKLKDNLERQHVPGAMLIQAKVGLAPESMIERYVAGLMCQNDKS-EPCG 59 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C L++A HPD + + PEK K +L V+ +R+ + E ++ G +V+ + A + Sbjct: 60 FCHCCDLLKASGHPDVHYVLPEKDKKSLSVEQIRQANKWALESSQFGHYRVIVIPQADRM 119 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 +AANALLKTLEEPPA+ F L+T + LL T+RSRC + +++ P EQ + W+S+E+ Sbjct: 120 NASAANALLKTLEEPPAQCLFILSTENTKLLLPTIRSRCEVWHVSSPSEQMCIDWVSQEI 179 Query: 181 TMS---QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSG--DWYSLLAA 235 S ALL P + + + + L A + S D + Sbjct: 180 GKSVPRHSALLCHFE-----PISTRQFVESGQDKEYQALIGAFIGFIRSDGLDTNEFITT 234 Query: 236 L--NHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDV 293 L N + +L+WL LL A K G T++ +AE+ + S L + Sbjct: 235 LMKNSSELSTQLNWLWLLLSCAQKSSLGIDIRTSLPEASQIAEVYGYES---LYTHSQSL 291 Query: 294 CHIREQLMSVTGINRELLITDLL 316 + EQL S G+N ELL+ D L Sbjct: 292 QSLSEQLRSFPGLNTELLVADWL 314 >UniRef50_C4L8D9 DNA polymerase III, delta prime subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8D9_TOLAT Length = 319 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/279 (34%), Positives = 138/279 (49%), Gaps = 5/279 (1%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL P + + + + R HA L+ G+G AL + LC+QPQ + CG C Sbjct: 2 YPWLMPYWLRFQQVFASKRLPHAFLLVGPAGIGKSALAVQWASLFLCEQPQQNTPCGKCH 61 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 CQL THPD++ + K ++GVD +R+++ +L +LG KV + A +T+A Sbjct: 62 ACQLSGKQTHPDWHVYGADDAK-SIGVDIIRQLSAQLMNSPQLGRGKVAVILQAERMTEA 120 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 A NALLKTLEEPP + L +LL T+ SRC++ L EQ A+TWL +++ Sbjct: 121 AENALLKTLEEPPGNSLLILQAESAMKLLPTIVSRCQVWTLQ-AEEQQALTWLQQQLP-G 178 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPA 243 ++ A LRL+ G+P L Q R + AL S L P Sbjct: 179 REITPALLRLNQGAPLRTLEYLNEGGEQQRLAVINALDAYRQQPWTISSLTKCWVSAMPV 238 Query: 244 RLHWLATLLMDALKRHHGAA--QVTNVDVPGLVAELANH 280 WL+ LL+DALK G Q+ D P L++ LA Sbjct: 239 TFEWLSRLLLDALKLQQGVVMQQLPFADHPALLSFLAQR 277 >UniRef50_Q2BG76 DNA polymerase III subunit delta n=1 Tax=Neptuniibacter caesariensis RepID=Q2BG76_9GAMM Length = 295 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 120/218 (55%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPW + L ++ R HALLI + G+G + ++ LLCQQP+ K+CG C+ Sbjct: 8 YPWFAERNKHLAELHRQKRLPHALLIHGMQGIGKALFAKSFAQMLLCQQPESGKACGVCK 67 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C+L AG+HPD + L PE+ L VD VR + E + A+ GG +VV + A + A Sbjct: 68 SCELNAAGSHPDLFILQPEEAGKQLKVDQVRALGEFIYSTAQQGGYRVVVIDPADSMNIA 127 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 +ANALLK LEEP ++T L T + ++L T++SRC+ P + A++WL E + Sbjct: 128 SANALLKMLEEPGSDTLLLLVTSKMGQVLPTIKSRCQHIECVTPDTEVAISWLMSEGDLD 187 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALA 221 ++ L ++ G+P ALA + + R L + LA Sbjct: 188 EERARGVLTINRGAPKEALAYLNNNLGEDRAQLIRGLA 225 >UniRef50_B4S1N1 DNA polymerase III subunit delta n=2 Tax=Alteromonas macleodii RepID=B4S1N1_ALTMD Length = 295 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 77/187 (41%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW + L++ Y A + HH LL+ + G+G + L LS LLC+ P C C+ Sbjct: 5 PWFTATYTSLISRYLAKKLHHGLLLTGVSGIGKNQLALGLSNTLLCKHPSVDGPCEQCQS 64 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C L QAG HPD++ L EK LGVD +RE KL+ A++GG KV+ + A +T+AA Sbjct: 65 CHLRQAGNHPDFHILESEK---QLGVDKIREGIAKLSGTAQMGGNKVLLIPKADTMTEAA 121 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-SREVTMS 183 ANALLKTLEEP T+ L T +L+ T+ SRC L+ P ++ +L ++ V + Sbjct: 122 ANALLKTLEEPTNNTFLLLITDSVNKLMPTILSRCERQVLSLPSVSESLNYLKAKGVEDA 181 Query: 184 QDALLAA 190 DALLAA Sbjct: 182 SDALLAA 188 >UniRef50_Q15U04 DNA-directed DNA polymerase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15U04_PSEA6 Length = 300 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 95/260 (36%), Positives = 137/260 (52%), Gaps = 12/260 (4%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC-QQPQGHKS---- 58 Y WL ++L HHALL++ G+G L R+LLC +P K Sbjct: 2 YSWLHASLQQLSQRAATLSLHHALLLKGEKGIGKTEFAQQLGRFLLCANKPALSKDNLGP 61 Query: 59 CGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAA 118 CGHC+ C L AG HPD Y + +K +GVDA+R+ +KL+ A+L GAKV+ + DA Sbjct: 62 CGHCQSCLLSAAGNHPDLYEIRSDK---QIGVDAIRDAIKKLSGSAQLSGAKVLLIHDAH 118 Query: 119 LLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR 178 +T+++ANALLKTLEEP T+ L + PERLL T+ SRC L P +Q + WL++ Sbjct: 119 TMTESSANALLKTLEEPTNNTFLLLLSSHPERLLPTILSRCEKVALFSPTQQECIDWLNK 178 Query: 179 EVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAY-SVPSGDWYSLLAALN 237 E + D A LRL SP + + + L + L Y +V + D + LA Sbjct: 179 EGYANVDD--ALLRLYGTSPLVLIEHLKTPPKVNYQELVENLGYLNVGTAD-PAALATKW 235 Query: 238 HEQAPARLHWLATLLMDALK 257 ++A + WL L++ LK Sbjct: 236 QDEAITIVKWLQVWLVNQLK 255 >UniRef50_Q21K67 DNA polymerase III, delta prime subunit n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21K67_SACD2 Length = 331 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 71/173 (41%), Positives = 100/173 (57%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL +++ R HALLI G+G D L A+ + LLC P +CG CR Sbjct: 9 YPWLESVWDEFAEKLAQKRVPHALLITGQEGLGSDTLAKAMGQLLLCLSPLEGIACGKCR 68 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 CQL+QAG+HPD +APE+ + +D +R VTE +++ A+ GG KVV VT + + Sbjct: 69 ACQLLQAGSHPDLLWIAPEEAGKQIKIDQIRRVTEFVSKTAQQGGKKVVVVTPTEAMNNN 128 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL 176 ++NALLK+LEEP +T L T + ++L T+RSRC L P A +WL Sbjct: 129 SSNALLKSLEEPAGDTVLILITFQESQILPTIRSRCARIVLTTPSYDVAQSWL 181 >UniRef50_A8PMJ4 DNA polymerase III subunit delta' n=1 Tax=Rickettsiella grylli RepID=A8PMJ4_9COXI Length = 324 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 76/194 (39%), Positives = 111/194 (57%), Gaps = 3/194 (1%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW +++L S+Q GR HALL G+G ++ LLC+QP+ ++C CR Sbjct: 9 PWHTQQWQQLYRSHQEGRLSHALLFAGQMGLGKSLFALHFAKTLLCKQPKQSRACQACRD 68 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C L+ AGTHPD L EK + +D +R++T+KLN H K++ + A L AA Sbjct: 69 CILVAAGTHPDLSLLTTEKSTQGIKIDQIRDITDKLN-HTSQATYKIIVINPADSLLVAA 127 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 + ALLK+LEEP + F L T + E LL T+RSRC+L PP + A+ WL++++ S Sbjct: 128 SQALLKSLEEPSCRSLFILLTEKREHLLPTIRSRCQLIRFNPPKKSLAMAWLAQQLPAS- 186 Query: 185 DALLAALRLSAGSP 198 AL LS+G+P Sbjct: 187 -ALDTLYHLSSGAP 199 >UniRef50_A8H3V9 DNA polymerase III, delta prime subunit n=7 Tax=Shewanella RepID=A8H3V9_SHEPA Length = 305 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/277 (30%), Positives = 136/277 (49%), Gaps = 4/277 (1%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M PWL+P +K + R HA L+ G G ++L+ L++ LC Q +CG Sbjct: 1 MTALPWLQPTLDKFSEQLKTARVGHAYLVGMDAGYGGESLVLELAKMSLCHQLGQGGACG 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C+ CQL++A HPD Y + E + + VD +RE+ +KL ++ GG +V + ++ L Sbjct: 61 FCKACQLIEANNHPDLYLVEAEGAQ--IKVDQIRELCQKLTTTSQQGGRRVAVILNSERL 118 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 A+ NALLKTLEEP +T L T P RL+AT+ SRC+ + P + WL ++ Sbjct: 119 NQASGNALLKTLEEPGKDTILLLQTNAPSRLIATISSRCQRLRVELPNKMQVKQWLKEQL 178 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ 240 T D + G P A L+ + + ++ + S+ SG + L +N +Q Sbjct: 179 TTQDDP--SWCLPVVGGPMAVLSAIETERYKTLIDYRKGWTQSLSSGHLCASLINVNEKQ 236 Query: 241 APARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAEL 277 L L +L AL + + +T V + A++ Sbjct: 237 VSDALKVLYLVLHRALVKQQDSDPLTRVKIANFSAKV 273 >UniRef50_B7VLY9 DNA polymerase III delta' subunit n=5 Tax=Vibrionales RepID=B7VLY9_VIBSL Length = 321 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 97/315 (30%), Positives = 156/315 (49%), Gaps = 7/315 (2%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 Y WL P + + S A R +++++ A G+G +AL+ L+ L+C + ++CG C Sbjct: 5 YSWLTPVWSEWKKSLDAERFPNSVIVNAPEGLGVEALVSQLTDALMCVNYES-EACGFCH 63 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C+LM++G+HPD++ + PEK ++ VD VR + ++LGG +V+ + A + ++ Sbjct: 64 SCELMKSGSHPDFHVIEPEKEGKSITVDQVRASNRWAQQSSQLGGLRVILLNPAEAMNES 123 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 A+NALLKTLEEP + F L+TR RL+ T+ SRC+ + P WL+ EV + Sbjct: 124 ASNALLKTLEEPASNCIFILSTRNSNRLMPTILSRCQQFNVVCPQLDAGSAWLNGEVGKT 183 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAP- 242 + L L+ +P A A+F +A + L + + P Sbjct: 184 VPQYI--LTLNDNAPLKAKAMFDQGGVEASTKALDGFVDVIKGTQPDMLKFSTELSKDPL 241 Query: 243 ARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMS 302 +L WL LL D K H G A + +P A L +S A + + EQL Sbjct: 242 IQLSWLWHLLSDVQKLHFGLA--NHAIIPSAKA-LCEVMSYQSAYAASNKLLILIEQLKQ 298 Query: 303 VTGINRELLITDLLL 317 G+N ELLI + L+ Sbjct: 299 HPGLNTELLIMNWLI 313 >UniRef50_Q1YTP5 DNA polymerase III, delta prime subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTP5_9GAMM Length = 311 Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 86/231 (37%), Positives = 121/231 (52%), Gaps = 2/231 (0%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW + L +S +GR HA+LI G+G L AL++ L+C +CG C+ Sbjct: 7 PWHEDAWASLNSSIDSGRLPHAVLISGDQGIGKLRLATALAQRLICSAEMVKYACGTCKT 66 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C L AG+HPD L PE+ + +D VR++ E L++ A+ GG KV + A + A Sbjct: 67 CNLFSAGSHPDITYLEPEEKGKAIKIDPVRKLCESLSKTAQQGGWKVAIIAPAEAMNINA 126 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 ANALLK LEEP ++T L + P RL AT+RSRC+ + P A+ WL+ +VT + Sbjct: 127 ANALLKNLEEPQSKTLLILVSHRPSRLSATIRSRCQKLSMPTPEADIALQWLT-DVTNDR 185 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAA 235 A L L+ G P AL Q DN + R + L V G L+AA Sbjct: 186 IAAEQVLPLAGGRPLLALDYLQSDNLEQRRQF-ETLVAEVADGSLSPLVAA 235 >UniRef50_A4BDY7 DNA polymerase III subunit delta n=1 Tax=Reinekea blandensis MED297 RepID=A4BDY7_9GAMM Length = 320 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 8/209 (3%) Query: 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGC 65 WL P L + GR H LL+ PG G + L++ LLC + ++ CG C+ C Sbjct: 7 WLTPTMSALSQQFIEGRLPHGLLLVGHPGNGANLFSTNLAQRLLCLD-KANQPCGRCKSC 65 Query: 66 QLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAA 125 L+ +G HPD + PE T+ V+A+REV + E A+ GG KVVW+ A + AA Sbjct: 66 LLIASGHHPDLKVVEPEGKSQTIKVEAIREVIRRATETAQQGGNKVVWLKSAETMNVNAA 125 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ- 184 NALLK LEEPP T+ + + RLL T+RSRCR+ LA P A+++LS ++Q Sbjct: 126 NALLKVLEEPPENTFLLVQAAQMARLLPTVRSRCRIVQLAQPERSDALSYLSAHNQLNQP 185 Query: 185 -DALLAALRLSAGSPGAALALFQG--DNW 210 D LL+ + +G P AL L Q D W Sbjct: 186 VDVLLS---MVSGRPLDALDLTQEQIDTW 211 >UniRef50_UPI0000E0FA0C DNA polymerase III subunit delta n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0FA0C Length = 298 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/251 (35%), Positives = 129/251 (51%), Gaps = 9/251 (3%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPW + + QA HHA+L+ A PGMG A ++ L+ LLC + +CG C+ Sbjct: 5 YPWFTEIHTQFMRHAQANTLHHAILLHAKPGMGKHAYVHQLADDLLCHHLKFGHACGQCQ 64 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C L QA +HPD Y +A +K + V+ +RE KL EHA+L K++ + A +T++ Sbjct: 65 SCLLNQASSHPDRYVIASDKQ---ISVNEIREALTKLQEHAQLRQRKILIIEHADTMTES 121 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANALLKTLEEP T+ L + +RLL T+ SRC + L P WL+ ++ Sbjct: 122 AANALLKTLEEPSLNTFLLLTVSDIQRLLPTILSRCEKNTLIIPSLDMIRAWLNEHYQIT 181 Query: 184 -QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALN-HEQA 241 D L+ A + + S AL N+ A + Q L ++ G SL A H QA Sbjct: 182 AADDLMRAYQFAPLSIVNALTEDTEMNYNAFK---QDLG-AIKQGQLNSLEFAQKWHSQA 237 Query: 242 PARLHWLATLL 252 L WL +L Sbjct: 238 HQSLGWLQLML 248 >UniRef50_A3WQJ1 DNA polymerase III, delta prime subunit, ATPase n=1 Tax=Idiomarina baltica OS145 RepID=A3WQJ1_9GAMM Length = 294 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 67/168 (39%), Positives = 103/168 (61%), Gaps = 1/168 (0%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 +PW+R ++ L+A+++A R HA + P G +AL LLC+QP G ++CG C+ Sbjct: 3 FPWMRQPWQHLLAAFKAQRLSHAYYFKQAPEQGTEALAQEFISLLLCRQP-GQRACGRCK 61 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C L QA HPD ++ +TLGVD VR +T +++ A GG +V+++ +T+ Sbjct: 62 ACLLRQANNHPDVIQFNVDEKHSTLGVDEVRRLTRFIHQTANQGGRRVIYLEVMDRMTEQ 121 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQY 171 AANA+LK LEEPP + L+ +PER+LATLRSR + ++A P +Y Sbjct: 122 AANAILKILEEPPENVVWLLSVEQPERILATLRSRMQWIHIALPKPEY 169 >UniRef50_A4BMM6 DNA polymerase III, delta prime subunit n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMM6_9GAMM Length = 357 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 106/319 (33%), Positives = 156/319 (48%), Gaps = 13/319 (4%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH-KSCGHCR 63 PW +P +++L A ++ GR HA+ + G+G L ++ LLC P+ CG CR Sbjct: 10 PWHQPVWDRLAACHRRGRVPHAIAVVGSAGLGKSRLAIRFAQALLCASPRSDGDGCGRCR 69 Query: 64 GCQLMQAGTHPDYYTLAPE-KGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD 122 C L AG+HPD+Y + PE + + +D +R + E L ++ GG +V V A +T Sbjct: 70 CCHLQAAGSHPDHYAVHPESEPGGPIKIDQIRRLIEFLMRSSQYGGYRVTLVDPADRMTL 129 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM 182 AAAN+LLKTLEEPPA L R+ +L ATLRSRCRL L PPP A WL+ Sbjct: 130 AAANSLLKTLEEPPAAAVLILVARQFSQLPATLRSRCRLVQLQPPPAVLAREWLAEHCPE 189 Query: 183 SQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAP 242 + + L L+ G+P A+A Q + R A ++ G +LAA N Sbjct: 190 A----IGLLALAGGAPLRAMAYAQAGT-EGRYAALIADLLAIVEGHRSPVLAAQNWTGIG 244 Query: 243 ARLHWLATLLMDALKRHHGAAQVTNVD-VPGL--VAELANHLSPSRLQAILGDVCHIREQ 299 R W+ L + + A +D +PG + L + S L + +V R Sbjct: 245 LR-DWIELLQLALAELARAAFTECELDRIPGRADLQTLTERIDHSCLHDYMEEVVATRRI 303 Query: 300 LMSVTGINRELLITDLLLR 318 L +N +L+I DL +R Sbjct: 304 LDQP--LNEQLVIEDLFIR 320 >UniRef50_A4CAL1 Putative DNA polymerase III delta' subunit n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAL1_9GAMM Length = 302 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/323 (30%), Positives = 152/323 (47%), Gaps = 26/323 (8%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL + L + Q + HHALL+Q + G+G + L+ LLC Q +CG C+ Sbjct: 3 YPWLGASHQMLADASQNKKLHHALLLQGVQGIGKQTMAVHLAGALLCPNQQNLTACGQCK 62 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C L+ A +HPDY L E+ T+GVD VR++ + A GAKVV V DA L+T A Sbjct: 63 SCHLLAAQSHPDYLVLGHEQ--KTIGVDEVRKIADFCQTSAGQRGAKVVVVNDADLMTTA 120 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANALLKTLEEP + L + + ERL AT+ SRC L+ Q W++ + Sbjct: 121 AANALLKTLEEPANNRFLILVSAQAERLPATVLSRCSQVTLSVDDAQLVEQWMAETDS-- 178 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPA 243 + + WQ E +++ + + Y L+ L + + Sbjct: 179 ------KIDWQSWQHLFLHQPLLLLKWQQNED------HTILT-NLYELVQQLKNGIS-- 223 Query: 244 RLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE--LANHLSPSRLQAILGDVCHIREQLM 301 A LL+D L++ + V + V V + L L Q L + + ++ + Sbjct: 224 -----AQLLVDILQQKSEYSSVFYIFVCDYVKQALLKQQLDFKAYQICLQHLLNFQQAVK 278 Query: 302 SVTGINRELLITDLLLRIEHYLQ 324 V G+N L ++DL+ ++ L+ Sbjct: 279 QVLGLNFPLAVSDLVFALQQQLK 301 >UniRef50_Q5QZ33 DNA polymerase III, delta prime subunit, ATPase n=1 Tax=Idiomarina loihiensis RepID=Q5QZ33_IDILO Length = 286 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 7/189 (3%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 +PWLR + +LVAS +AGR HA +Q G I L+++LLC+QP G +CG C+ Sbjct: 3 FPWLREPWLRLVASAEAGRLAHAYYLQHNVEGGSTEFIQRLNQFLLCKQP-GKSACGKCK 61 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C L +G HPD +T+ + N +GVD VRE+ + + + A G KV + +A +T+ Sbjct: 62 SCLLYLSGNHPDTWTIDGAQ-VNRIGVDTVRELQQNVTQTANQNGLKVAVILEAEKMTEQ 120 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 A NALLK LEEPPA+T + ++T++ ERLL TLRSR + +A Y T S E Sbjct: 121 AGNALLKVLEEPPADTHWLVSTKDAERLLPTLRSRMQWLSIA-----YPTTAQSDEQVTF 175 Query: 184 QDALLAALR 192 LLA LR Sbjct: 176 AKQLLAGLR 184 >UniRef50_P52024 DNA polymerase III subunit delta' n=22 Tax=Pseudomonadaceae RepID=HOLB_PSEAE Length = 328 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 106/336 (31%), Positives = 164/336 (48%), Gaps = 25/336 (7%) Query: 4 YPWLRPDFEKLVASYQAGRGHHA--LLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGH 61 YPW + + +L GR HA L+ G+G AL + LLCQ+P +CG Sbjct: 5 YPWQQALWSQL-----GGRAQHAHAYLLYGPAGIGKRALAEHWAAQLLCQRPAAAGACGE 59 Query: 62 CRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 C+ CQL+ AGTHPDY+ L PE+ + + VD VR++ + + A+LGG KVV + A + Sbjct: 60 CKACQLLAAGTHPDYFVLEPEEAEKPIRVDQVRDLVGFVVQTAQLGGRKVVLLEPAEAMN 119 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV- 180 AANALLK+LEEP +T L + +P RLL T++SRC P ++ WL+R + Sbjct: 120 VNAANALLKSLEEPSGDTVLLLISHQPSRLLPTIKSRCVQQACPLPGAAASLEWLARALP 179 Query: 181 TMSQDALLAALRLSAGSPGAALALF-QGDNWQ-------ARETLCQALAYSVPSGDWYSL 232 +AL L LS GSP A L QG Q ++ L Q +A S + W S+ Sbjct: 180 DEPAEALEELLALSGGSPLTAQRLHGQGVREQRAQVVEGVKKLLKQQIAASPLAESWNSV 239 Query: 233 LAALNHEQAPARLHWLATLLMDALKRH--HGAAQVTNVDVPGLVAELANHLSPSRLQAIL 290 P W + L+ H + D+ ++ L + +++ A+ Sbjct: 240 -------PLPLLFDWFCDWTLGILRYQLTHDEEGLGLADMRKVIQYLGDKSGQAKVLAMQ 292 Query: 291 GDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 + R+++++ +NR LL+ LL++ PG Sbjct: 293 DWLLQQRQKVLNKANLNRVLLLEALLVQWASLPGPG 328 >UniRef50_B5FG33 DNA polymerase III, delta' subunit n=3 Tax=Aliivibrio RepID=B5FG33_VIBFM Length = 327 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 13/324 (4%) Query: 2 RWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGH 61 + YPW +++ Q R HA+L G G +AL+ + LLC QG + CG Sbjct: 4 KLYPWQTSLWQQWQQLIQNDRLPHAILCAMPIGAGREALVQYFADTLLCL-TQGIEPCGF 62 Query: 62 CRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 C C+L+++ THPD + + PE ++ V+ +R+ E ++ +V+ + A +T Sbjct: 63 CHSCELIKSQTHPDLHWIKPETEGKSISVEQIRQCNSWALESSQFNAKRVIIIDPAEKMT 122 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT 181 ++AANALLKTLE PP F L P +LL T+RSRC++ + + + WL Sbjct: 123 ESAANALLKTLEAPPKNCQFVLLADSPHQLLPTIRSRCQVWHQSKIDAESITIWLKETEN 182 Query: 182 MSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPS-----GDWYSLLAAL 236 +S + ++ L+ P A + +Q + L V S D + L Sbjct: 183 LS--VSMQSIALNDSLPLAVKSFYQDKKQALHKQLLSDFESCVKSDFCQTADIVKTVLKL 240 Query: 237 NHEQAPARLHWLATLLMDALKRHHGAAQV-TNVDVPGLVAELANHLSPSRLQAILGDVCH 295 E L WL+ LL D KR G Q + D L+ LA LS + + + Sbjct: 241 ESE----GLTWLSYLLADIQKRQMGIMQPWVHCDEIKLIESLAKTLSSNVVYKQYIALNS 296 Query: 296 IREQLMSVTGINRELLITDLLLRI 319 ++EQL S G+N+ELL+T + Sbjct: 297 LQEQLDSFPGLNKELLLTQWMFEF 320 >UniRef50_Q2SIR6 DNA polymerase III delta prime subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIR6_HAHCH Length = 335 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 90/318 (28%), Positives = 154/318 (48%), Gaps = 10/318 (3%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG-HKSCGHCR 63 PWL + V + A+L+ G+G + L +++LLC+Q + + CG CR Sbjct: 13 PWLSKTWRDWVGLAHNDKVPSAILVAGQSGVGKNRLTSEYAKFLLCEQAKRLERPCGDCR 72 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C+L++AGTHPD +APE G + +D VR + + + ++ ++ +T A + Sbjct: 73 SCKLIEAGTHPDLQWVAPEDGAKAIKIDQVRGLGDFIYAKPQISRRRICVLTPAEAMNAY 132 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 +ANA+LKTLEEPPA L +++ LL T+RSRC+++ LA P + V WL+ ++ + Sbjct: 133 SANAILKTLEEPPASVVILLVSQQISLLLPTIRSRCQIYTLAAPDRESVVNWLT-QLDVP 191 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQAR-ETLCQALAYSVPSGDWYSLLAALNHEQAP 242 ++ + + G P ALA D + R E L L Y D ++L + Sbjct: 192 KERAYSLTESAGGRPLTALAWHSQDILELRAEVLADWLNYLEGRVDAFTLAETWSKLDLE 251 Query: 243 ARLHWLATL---LMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 WLA L+ A + G T + G+ A L +L ++ ++ I+ Sbjct: 252 RLADWLAIWLKQLLTATQIGEGEGSETEATLAGVGA----RLDTQQLVSLYAELIEIKRS 307 Query: 300 LMSVTGINRELLITDLLL 317 L+ +N +L++ LL Sbjct: 308 LVEQRNLNPQLMLESWLL 325 >UniRef50_B8KGN9 DNA polymerase III, delta prime subunit n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KGN9_9GAMM Length = 331 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 109/210 (51%), Gaps = 3/210 (1%) Query: 2 RWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGH 61 R PW + + L A GR HA+L++ PG G + L +L+RYLLC +CG Sbjct: 15 RCLPWHQETWINLQAQCANGRLPHAMLLEGTPGTGRNRLALSLARYLLCGDMSAQGNCGS 74 Query: 62 CRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 C+ C L +G HPD T+ P + +G+DA+REV LG +KV+ ++ A LT Sbjct: 75 CKTCTLSASGAHPDLLTVMPAETGKAIGIDAIREVIRFAAGTPTLGRSKVMLISPAESLT 134 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT 181 AA NA LK LEEP +ET+ + + L AT+RSRC+ L P + + WL ++ Sbjct: 135 QAAFNAFLKCLEEPSSETFIVMVSASGYPLPATIRSRCQRWKLPSPSLKESRAWLQEALS 194 Query: 182 MSQD---ALLAALRLSAGSPGAALALFQGD 208 D ++ A L LS G P AL D Sbjct: 195 GDADGAASIDAMLELSGGRPLYALEKLHSD 224 >UniRef50_Q8D3A6 HolB protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D3A6_WIGBR Length = 329 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/318 (24%), Positives = 157/318 (49%), Gaps = 8/318 (2%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 Y WL + ++++ Y +LIQ+ G G L + + +LC +P SC +C+ Sbjct: 3 YEWLVKPYREIISYYIRSNTSSVILIQSNTGCGIKNLYLYIVKRILCLKPNNFISCNNCK 62 Query: 64 GCQLMQAGTHPDYYTLAPEKG-KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD 122 C ++ +HPD++ + + KNT+G+D VR + + L ++ L KV+ + + LT+ Sbjct: 63 SCNFIKENSHPDFFNILTKNYLKNTIGIDDVRFICKNLLLNSHLNKGKVILIENLEKLTN 122 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV-T 181 A++ALLKTLEEP +T+F L + +L ++ SR ++ + + ++ WL ++ Sbjct: 123 QASHALLKTLEEPTIKTYFILGCKNIYCILPSIISRSQIWKVIINKKD-SLKWLEKKGHD 181 Query: 182 MSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW-YSLLAALNHEQ 240 ++ ++ +L+L SP A + + W+ R+ L L + +SLL ++ Sbjct: 182 VNSKKVIISLKLCNWSPVIANKIILSNFWKERKKLIFTLNNIFLKKEIAFSLLEYF--KK 239 Query: 241 APARLHWLATLLMDALKRHHGAA-QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 L +L++D +K + + N D L+ ++ + S L + + ++ Sbjct: 240 IDMFFLILRSLILDTIKYNSNIMFNIINYDCFYLIKNISKNFSSEYLYEQWKFLLNFKKL 299 Query: 300 LMSVTGINREL-LITDLL 316 + IN+E+ LI ++L Sbjct: 300 KKEIPRINKEIFLIKNIL 317 >UniRef50_Q1QX48 DNA polymerase III, delta prime subunit n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QX48_CHRSD Length = 323 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 8/317 (2%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW R + +LV A R HALLI G+G L AL LC P G +CG C Sbjct: 5 PWQRDLWTRLVRQQDAQRLPHALLISGPHGVGKHDLADALIARTLCHAP-GETACGECHA 63 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C ++ +G HPD ++P + + + +D +R+V +++ A+ GG +V+ + A + AA Sbjct: 64 CHMLASGYHPDLLDISPAEKRRQIRIDPIRQVNAFVSQTAQQGGHRVIRLHPAEAMNVAA 123 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 +NALLK+LEEP T F L P R+L T+RSRC+ L P + A+ WLS + ++ Sbjct: 124 SNALLKSLEEPGERTLFVLLADIPSRMLPTIRSRCQHWSLGVPDAESALPWLSERLEDAE 183 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPAR 244 A LR++ G P AL L +G R+ L + V + + A L+ Q+ R Sbjct: 184 QARF-WLRVAGGLPQFALELVEGR--ALRQELRELFDALVRGAEPVAEAARLD-PQSLDR 239 Query: 245 LHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ--LMS 302 + W + ++ L R A +V P L+ + +R++ + + REQ L++ Sbjct: 240 VLWYGIVWLEDLIRLGVAGDAEHVRNPDLLPLYRQAVKNARVRDWFRLLDYAREQRRLIA 299 Query: 303 VTGI-NRELLITDLLLR 318 G N +L++ L+R Sbjct: 300 AGGNPNAQLVLEAWLVR 316 >UniRef50_Q0A8S3 DNA polymerase III, delta prime subunit n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8S3_ALHEH Length = 337 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP-QGHKSCGHCRG 64 WL +L+ +G+ HALL+ G G L L R LLC QP +G ++CG C Sbjct: 24 WLDDRLSELLRQAASGQLPHALLLAGPAGTGKSLLGGHLVRALLCHQPGEGGRACGRCES 83 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C+ + G HPD+ LAPE+ + + VDAVR + LN AR GG ++ + A LT A Sbjct: 84 CRALARGLHPDFRHLAPEE-RAVITVDAVRALGRFLNLSARFGGWRIALIDPADTLTVNA 142 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 AN+LLKTLEEPPA T L + P +L AT+RSRCR + PP + A++ L + Sbjct: 143 ANSLLKTLEEPPATTLLVLVSSRPAQLPATIRSRCRHLTIPVPPAERALSGLRGQGLTVT 202 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQ 211 + LA L+ G+P F+G W+ Sbjct: 203 ERTLA---LAGGAP------FRGLAWE 220 >UniRef50_Q606M1 DNA polymerase III, delta prime subunit n=1 Tax=Methylococcus capsulatus RepID=Q606M1_METCA Length = 335 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 102/321 (31%), Positives = 153/321 (47%), Gaps = 12/321 (3%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL P +L A +AGR LLI G+G L +R LLC P +CG C Sbjct: 8 YPWLAPARRRLRAYLEAGRLPQGLLISGAAGVGKGVLADDFARRLLCASPPAEGACGTCH 67 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C+L+ AG HPDY + PE+ + V+ VR + ++L+ + G ++VV + A + A Sbjct: 68 ACRLVVAGNHPDYLHIEPEEAGKRITVELVRRLIDRLSLKPQYGASRVVVIRPAHAMNMA 127 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE-VTM 182 AAN+LLKTLEEP T F L + P +L AT+ SRC+ + P + A+ WL + V Sbjct: 128 AANSLLKTLEEPDPHTLFLLISERPAQLPATVLSRCQRLDVRLPEREEALRWLRGQGVGE 187 Query: 183 SQDALLAALRLSAGSPGAALALFQGDNWQARETLC--QALAYSVPSGDWYSLLAALNHEQ 240 +ALLA ++ G+P A+ L G + R + +A D ++ E Sbjct: 188 EAEALLA---MAGGAPVRAVELHGGGDLAQRRRMLFDDWVAVLRDESDPLAVAERWAKED 244 Query: 241 APARLHWLATLLMDALKRHHGAAQV----TNVDVPGLVAELANHLSPSRLQAILGDVCHI 296 L WL + D ++ A V N D+ + + A L L A L V Sbjct: 245 GETVLIWLRGWIADLIRISSTEASVPLRLANADLEPGLRKAAAGLDLRALFACLDGVDAA 304 Query: 297 REQLMSVTGINRELLITDLLL 317 R L NR+L++ ++L+ Sbjct: 305 RRNLEGQA--NRQLVMEEILI 323 >UniRef50_Q057L1 DNA polymerase III, d' subunit n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057L1_BUCCC Length = 325 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 6/273 (2%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M YPWL ++ ++ Y + H +LI + G G LI + +++LC K C Sbjct: 1 MNLYPWLVNYYKNIIKKYHISKLHPIILINSPIGTGISNLILNICQWILCLYKNKEKYCN 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 +C C L++ HPD+Y + K + ++ +R + + + + ++ G K+++ + L Sbjct: 61 NCSSCLLIKNNVHPDFYFIKNSFRKKYIKINKIRNIIKCIYQMSQQGKEKIIYFQNINYL 120 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-SRE 179 T A+++LLKTLEEPP T FFL T ++ T++SR ++Y+ E + WL + Sbjct: 121 TPEASSSLLKTLEEPPKNTIFFLRTTNISKIDHTIKSRSIIYYINTLDENKNLFWLKKKN 180 Query: 180 VTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALN-- 237 + +L ALR++ P R+ + + + +L+ +N Sbjct: 181 KNYKKKKILTALRINNNIPLITHKFLNTYLLNERKNFMLEIYNNTINKSNVNLIQLINTY 240 Query: 238 HEQAPARLHWLATLLMDALK-RHHGAAQVTNVD 269 HE A +W+ L++D +K + + + ++ N+D Sbjct: 241 HEDKIA--NWIICLILDVIKYKTYNSKKIINLD 271 >UniRef50_C5S6L9 DNA polymerase III, delta prime subunit n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S6L9_CHRVI Length = 359 Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 108/320 (33%), Positives = 151/320 (47%), Gaps = 11/320 (3%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK-SCGHCR 63 PW + +L A+ A R H LLI G+G AL AL++ LLCQ P +CG C Sbjct: 26 PWTDAIWSRLQAARAADRLAHGLLISGPNGVGKRALARALAQSLLCQTPSAQGLACGQCA 85 Query: 64 GCQLMQAGTHPDYYTLAP--EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 C+L+ AG+HPD + P E + +DAVR E+ + KVV + A L Sbjct: 86 DCRLLAAGSHPDLIEVGPDPESKSGEIPIDAVRLFAERESLTPSRALFKVVLIDPADRLN 145 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT 181 AAANALLKTLEEP T L RL AT+RSRC L + P E A++WL+ Sbjct: 146 QAAANALLKTLEEPTGHTVLCLIGERIGRLPATIRSRCLLIPVPIPDEAQALSWLASRAP 205 Query: 182 MSQDALLAALRLSAGSPGAALALFQGDNW--QARETLCQALAYSVPSGDWYSLLAALNHE 239 + L LRL+ G+P ALA Q + L L + GD ++ N Sbjct: 206 RADWPL--RLRLAHGAPLRALAEAADSARLEQRGQCLDGLLEIARGRGDPVTIAGRWNEI 263 Query: 240 QAPARLHWLATLLMDALKRHHGAA--QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIR 297 A L WLA ++ D L+ A ++ + D +A LA L P+ L + R Sbjct: 264 GAGRILDWLAGIMGDLLRLGVCATPPRLDHPDRQDDLAALAQRLDPAAAHRFLKRILETR 323 Query: 298 EQLMSVTGINRELLITDLLL 317 + + +N++LL+ L L Sbjct: 324 A--LGESNLNQQLLLESLAL 341 >UniRef50_A0Z287 DNA polymerase III subunit delta n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z287_9GAMM Length = 322 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 1/216 (0%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW E+L + Q + HA+L+ G+G L + + LLC+ +G + CG C Sbjct: 16 PWQHGTLERLSSLEQQEKLPHAILLTGARGLGKTQLAASFATGLLCE-ARGVEPCGSCAS 74 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 CQL G H D+ +APE+GK +GVDA+R + + + G KV+ + A +T AA Sbjct: 75 CQLAGGGAHGDFRWIAPEEGKRAIGVDAIRSAVTFMQQTSGYGSHKVLVIEPAEAMTAAA 134 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 ANALLKTLEEPP + L + L AT+RSRC+ + L P +TWL+ + + S+ Sbjct: 135 ANALLKTLEEPPGKALLILVSHRSGELPATVRSRCQRYNLPHPSRSSTLTWLAEQTSCSE 194 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQAL 220 A L+ P A+ L +G++ ++E L AL Sbjct: 195 PVAERAYSLAQAQPLTAVQLIRGEDLASKEALIMAL 230 >UniRef50_A7BV86 DNA polymerase III, delta prime subunit n=1 Tax=Beggiatoa sp. PS RepID=A7BV86_9GAMM Length = 334 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 11/293 (3%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH-KSCGHCR 63 PW ++++ + R HALL+ GMG L+ LLC+QPQ ++CGHC+ Sbjct: 6 PWHDALWQQIQSRVMQNRLPHALLLSGPQGMGKALFAQRLAENLLCEQPQADGQTCGHCK 65 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C L+ A THPD + + P + + V+ +RE+ + A +++ V A + Sbjct: 66 PCHLLLANTHPDLFKVEPVEAGKQISVNQIRELIQFSTLTASYNRHQIIIVNPAEAMNRN 125 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AAN+LLK LEEP ++T L + + + LLAT+RSRC+ + P TWL +++ Sbjct: 126 AANSLLKLLEEPSSDTVIMLVSHQYQALLATIRSRCQRIDFSHPEPTVTQTWLHNQLSTK 185 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSG--DWYSLLAALNHEQA 241 + L L LS +P AALAL Q D R+ L ++L +P+G D + + N + Sbjct: 186 INIQL-LLNLSNQAPLAALALAQTDGMAKRQILFESLT-QLPTGKDDPIRIAESWNQLEV 243 Query: 242 PARLHWLATLLMDALKRHHGAAQ----VTNVDVPGLVAELANHLSPSRLQAIL 290 L W+ MD ++ +G + + N D + LA +P +L +L Sbjct: 244 VQVLEWMLLWTMDIIR--YGITEQRHSIINQDHQQTLQRLAKQFNPLKLFELL 294 >UniRef50_C9LSD1 DNA polymerase III, delta prime subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSD1_9FIRM Length = 336 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 110/321 (34%), Positives = 157/321 (48%), Gaps = 19/321 (5%) Query: 10 DFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQ 69 + +L + GR HALL + G+G + L+ LLC + CG C C+ Sbjct: 16 NIHRLRTMLRDGRLPHALLFSGISGVGKKKVARLLAAALLCGREDA--PCGVCPSCRAFL 73 Query: 70 AGTHPDYYTLAPE---KGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 AGTH DY APE KG L +DAVRE+ +K L G VV V DA + +AAAN Sbjct: 74 AGTHSDYVEAAPESRGKGVRVLRIDAVREIEKKAARKPLLSGRFVVLVDDADAMNEAAAN 133 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCR-LHYLAPPPEQYAVTWLSREVTMSQD 185 +LLKTLEEP +F L T + LL T+ SR R +H+ A PE L+R V + Sbjct: 134 SLLKTLEEPQGAVFFLLVTAKRTALLPTILSRVRDMHFGALSPEGIEEALLARGVESRKA 193 Query: 186 ALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSL------LAALNHE 239 LA + GS G AL LF+G Q E Q L +S+ + + +SL L L + Sbjct: 194 HSLAM--AADGSLGHALLLFEGGGLQLMEDAAQTL-FSLSALNMFSLWAKAEELGKLPRD 250 Query: 240 QAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 +A L L+ LL D L G ++ + + G +LA+ L+ I + +RE Sbjct: 251 RAEEWLLALSRLLRDMLALLSGRGRLYHEEKRG---DLAHALADFPETHIFACLALVRET 307 Query: 300 LMSV-TGINRELLITDLLLRI 319 L + + + +LL LL+R+ Sbjct: 308 LGRLRSNASVQLLFEGLLMRL 328 >UniRef50_B8KQW7 DNA polymerase III, delta prime subunit n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KQW7_9GAMM Length = 321 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 94/181 (51%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW + + R HAL++ PG G L ++L+ LLC +P CG C Sbjct: 14 PWHHDTVASVYHDSEQDRIPHALMLVGAPGTGRRQLAWSLAAMLLCSRPSVAGGCGTCDV 73 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C+ +G H D L PE K +G+D VR + L + A GG KV+ + A +T AA Sbjct: 74 CRQFMSGAHGDSRWLEPEPEKRAIGIDQVRGAVQFLQQTAAYGGRKVLVIAPADAMTSAA 133 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 ANALLKTLEEP ++ L + ERL AT+RSRC+ L+ P + +TWL V + Sbjct: 134 ANALLKTLEEPAGDSVMLLVSDYGERLPATVRSRCQRRVLSHPSREQGLTWLKSVVEPAG 193 Query: 185 D 185 D Sbjct: 194 D 194 >UniRef50_B5JVJ6 DNA polymerase III, delta prime subunit n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVJ6_9GAMM Length = 343 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGC 65 W P ++ + + GR HALL+Q G+G L+R LLCQ G +CG C+ C Sbjct: 15 WHTPHWQSVAEQREQGRLPHALLLQGAAGVGKGLFARQLARGLLCQNAAGVAACGQCQDC 74 Query: 66 QLMQAGTHPDYYTLAPEKGKN-----TLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 L G HPD++ + E+ K + VD +R +++ L+ + G KV + A + Sbjct: 75 HLSAIGQHPDWHEVTFERTKEGKLSREIRVDQIRALSDSLSLKSHSAGGKVAVIYPAHKM 134 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 AAN++LKTLEEP A+T+ L T P RLL T+RSRC+ P A WL+ V Sbjct: 135 NVNAANSVLKTLEEPSADTFLLLVTDAPSRLLPTIRSRCQSIRFDVPSADQAEQWLASVV 194 Query: 181 T-MSQDALLAALRLSAGSP 198 S ALLA +S G+P Sbjct: 195 ADQSPQALLA---MSGGAP 210 >UniRef50_A5D691 DNA polymerase III, gamma/tau subunits n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D691_PELTS Length = 335 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 8/293 (2%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L+ + GR HA L G+G A +R LLC P+G +CG CR C+ ++ H Sbjct: 17 LMNAVACGRVAHAYLFAGPAGVGKKTTALAFARALLCPVPEGGDACGTCRQCRQVEHRNH 76 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD Y + P T+ ++ +RE+ + GG K+ + A +T AAN LLKTLE Sbjct: 77 PDLYIVNPSGA--TIKIEQIRELQHRAPYRPYQGGRKLFLICRAETMTAEAANCLLKTLE 134 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRL 193 EPP +T L + +P+ LL T+ SRC+ + P L+ ++Q+ L A + Sbjct: 135 EPPHDTVLILVSDQPQSLLPTVLSRCQQCFFKSIPLSELSGSLTARHGLAQEEALLAAAM 194 Query: 194 SAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAA----LNHEQAPARLHWLA 249 S GS G ALA G + R +G +L A + E+A L L Sbjct: 195 SGGSMGKALAYASGSLAERRNAAGALAGALKTAGPLEALEMAGKISEDREEALLILEMLI 254 Query: 250 TLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 D L + AA + N D GLV + A P RL I+ D+ R ++ Sbjct: 255 CWFRDLLVYRETEDAALLFNADRAGLVKKEAQSFQPGRLVEIIEDIEATRNKI 307 >UniRef50_B9ZR24 DNA-directed DNA polymerase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR24_9GAMM Length = 324 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/178 (39%), Positives = 97/178 (54%), Gaps = 3/178 (1%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK-SCGHCR 63 PWL P ++LV + GR +LI PG+G L ++ + LLCQ+ G++ +CG C Sbjct: 6 PWLEPIRKRLVRRGRDGRLPSGILITGSPGLGKTLLTTSVVQSLLCQRASGNEPACGECN 65 Query: 64 GCQLMQAGTHPDYYTLAP-EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD 122 C+ ++ G HP+ L P E GK+ L VDAVR+ TE L G + + + A L Sbjct: 66 ACRSLEGGVHPEVRLLEPAEPGKDIL-VDAVRDATEFLTLSGSGGALRALIIRPADALNV 124 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 AANALLKTLEEPPA FL P L AT+RSRC+ + P + WL+ E Sbjct: 125 NAANALLKTLEEPPAGATLFLEAARPASLPATIRSRCQQVDVVSPSIEQVHEWLAAET 182 >UniRef50_A6VXK9 DNA polymerase III, delta prime subunit n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VXK9_MARMS Length = 312 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 3/174 (1%) Query: 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGC 65 WL P ++ Q HALLI G+G + L + + + L+C++ Q +CG C C Sbjct: 7 WLIPCLRQVQVLKQTNSLSHALLITGADGVGQEELAHEMVKNLMCEKNQA-AACGTCHSC 65 Query: 66 QLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAA 125 QLM A THPD+ L E +T+ VD VR + ++++ ++G KVV +T A + AA Sbjct: 66 QLMSADTHPDFRVLDGEA--STIKVDQVRLLVRQISQKPQVGQNKVVLITHAQAMNINAA 123 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE 179 NA+LK LEEP T+F L + + L+ T+RSRC L + P +WL ++ Sbjct: 124 NAVLKALEEPADRTFFVLTSSQSSSLMPTIRSRCLLVNVPTPSMNEVKSWLMQQ 177 >UniRef50_C7RBH1 DNA-directed DNA polymerase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBH1_KANKD Length = 332 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 5/253 (1%) Query: 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGC 65 W + F+++ +Q G HA+L+ G+G + +L+ +LLC Q ++CG C+ C Sbjct: 7 WNQGRFKRVQDQFQQGSLPHAILLMGPEGIGRENFAQSLAEWLLCLNRQ-DEACGECKSC 65 Query: 66 QLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAA 125 L +AG HPDY+ L E+ K + V VRE+ + E + GG KV +T+ + ++ Sbjct: 66 FLFEAGHHPDYHLLDIEQDKTQISVGQVRELITAMQESSHQGGWKVANITNVQAMNASSF 125 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-SREVTMSQ 184 NALLKTLEEP T L T + + + T+RSR +L L+ + WL R+ M+Q Sbjct: 126 NALLKTLEEPQDNTLLILQTSQLQGVPLTIRSRAQLLSLSVDGSEEVKAWLIERQGNMTQ 185 Query: 185 DALLAALRLSAGSPGAALAL-FQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPA 243 AL AA+ L +P A GD + E + Q G +A HE+ Sbjct: 186 -ALEAAINLFPQAPYKAEDFGVNGDTLKYAEFIVQINDLVAGKGSPIE-MAQFWHEELAD 243 Query: 244 RLHWLATLLMDAL 256 + W+ ++ D L Sbjct: 244 AVFWMQLMVRDIL 256 >UniRef50_A3YHR7 DNA polymerase III subunit delta n=1 Tax=Marinomonas sp. MED121 RepID=A3YHR7_9GAMM Length = 322 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/153 (40%), Positives = 87/153 (56%), Gaps = 2/153 (1%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HALL+ G G L ++ +LC Q Q + +CG C C+L AGTHPDY+ L ++G Sbjct: 31 HALLLMGKDGGGQHLLATQIAYDILCDQKQLNSACGECHSCRLNHAGTHPDYHLLDGQEG 90 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 T+ VD +R++ K+ ++ AKVV + AA + AANA+LK LEEPP+ T+F L Sbjct: 91 --TIKVDQIRQIITKVATSPQVSHAKVVILAQAASMNINAANAVLKALEEPPSGTYFILT 148 Query: 145 TREPERLLATLRSRCRLHYLAPPPEQYAVTWLS 177 +L+AT+RSRC L L P W S Sbjct: 149 ADASSQLIATVRSRCLLINLPEPSSAQIEEWFS 181 >UniRef50_B8GSK5 DNA-directed DNA polymerase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSK5_THISH Length = 321 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 6/198 (3%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKS-CGHC 62 YPWL + +L+ GR HALL+ G+G AL +L+ LC P + CGHC Sbjct: 5 YPWLEDAYRQLLGRLAGGRLPHALLLTGPVGIGKRALAESLALAALCTAPGVEGAPCGHC 64 Query: 63 RGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD 122 C+L +A THPD + + K + VD +RE++E + +G +V + A + Sbjct: 65 DSCRLYRADTHPDLTRVTIPEDKTQIVVDQIRELSETMGLSRSMGAHRVALLWPAEAMNP 124 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE-VT 181 AAN+LLKTLEEPP T L + EP RL AT+RSRC+ + PP++ WL+ + V Sbjct: 125 NAANSLLKTLEEPPERTLMILVSAEPSRLPATIRSRCQTLAVPLPPDEITRAWLAGQGVQ 184 Query: 182 MSQ-DALLAALRLSAGSP 198 Q DALL L+ G+P Sbjct: 185 AGQVDALLC---LARGAP 199 >UniRef50_A4J0K7 DNA polymerase III, delta prime subunit n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0K7_DESRM Length = 335 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/322 (28%), Positives = 147/322 (45%), Gaps = 17/322 (5%) Query: 11 FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQA 70 + L + Q R HA L PG+G + + ++ LLC+ PQG +CG+C+ C+ Sbjct: 14 IQTLKNAVQKSRVAHAYLFMGPPGIGKQTVARSFAQVLLCEAPQGGDACGNCKSCRQTDG 73 Query: 71 GTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLK 130 G HPD + L P T+ ++ +RE+ ++ G V + + +T AAN LK Sbjct: 74 GNHPDLHLLRP--SGVTIKIEQIRELQRQVQYKPYQGIRHVFILEKSETMTQEAANCFLK 131 Query: 131 TLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAA 190 TLEEP + T F L + +P LL T+ SRC+ Q L +++D Sbjct: 132 TLEEPGSATVFILLSDQPYGLLPTILSRCQQLQFRSLSNQEVSEGLRVLCQVARDRAEEL 191 Query: 191 LRLSAGSPGAALALFQG-DNWQARETLCQALAYSVPSGDWYSLLAA---LNHEQAPA--- 243 L++GS G A+ L G D W RE L P Y L A L+++++ A Sbjct: 192 APLASGSIGRAIQLAGGEDQWPLREKAL-WLVQRFPQMSQYQALQAAEELSNDRSAAVEA 250 Query: 244 ---RLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 L W LL+ R + N D + E N +PS++ I+ ++ +E+L Sbjct: 251 LEIMLLWFRDLLVYHYTRQKEI--LINQDKIDTLLEQENWYAPSKVVEIIEEIKLAKERL 308 Query: 301 MSVTGINRELLITDLLLRIEHY 322 M+ N + + ++L+I Y Sbjct: 309 MA--NANTRMALEVMMLKINSY 328 >UniRef50_C1DCQ8 HolB n=2 Tax=Neisseriaceae RepID=C1DCQ8_LARHH Length = 329 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 90/246 (36%), Positives = 124/246 (50%), Gaps = 18/246 (7%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP-QGHKSC 59 M+ PW + D+ +L ++ G ALL+ G+G D L++ LLC+QP H +C Sbjct: 1 MKLLPWQQADWHQLAHGFERLPG--ALLLAGPQGIGKDRFARFLAQSLLCEQPVADHAAC 58 Query: 60 GHCRGCQLMQAGTHPDYYTLAPEKGKNTLG--------VDAVREVTEKLNEHARLGGAKV 111 G C C+ AG HPDY LAPE ++ G ++A+R++ + A GG +V Sbjct: 59 GECEACRWFAAGNHPDYRYLAPESREDDKGARRLAQIKIEAIRDMIDFAQLTAHRGGRRV 118 Query: 112 VWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQY 171 + + A L AAANALLK LEEPP + F L P RLL TL SRCR L PP + Sbjct: 119 IVLEPAEALNLAAANALLKILEEPPEDVHFILVAHHPRRLLPTLLSRCRTLVLTPPDAEQ 178 Query: 172 AVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYS 231 A+ WL+ LA AG GA AL + + RE L LA+ +G S Sbjct: 179 ALDWLTANGVADAGQELA----HAG--GAPFALTEPERIPLRERLIDTLAHP-DAGQILS 231 Query: 232 LLAALN 237 + A L+ Sbjct: 232 VAAELD 237 >UniRef50_A4XHH7 DNA polymerase III, delta prime subunit n=2 Tax=Clostridia RepID=A4XHH7_CALS8 Length = 320 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 20/278 (7%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA + + G G L S+++LC+ SCG C+ C+L +A +HPD++ + ++ Sbjct: 25 HAYIFEGEKGFGKKLLARVFSKHILCENKS---SCGVCKSCRLFEASSHPDFHIIKRQED 81 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 K + V+++RE+ + L+ KV + + L+ +A NALLKTLEEPP F + Sbjct: 82 KKEISVESIREIIKDLSRGPIFSDKKVFIIEEGEELSISAQNALLKTLEEPPTYALFIIT 141 Query: 145 TREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAA---LRLSAGSPGAA 201 ERLL T+ SR + ++Y+ + +++ + Q+ L ++L G+P A Sbjct: 142 CNNIERLLPTVLSRS----IVLSFKRYSASEIAK--ILEQNGLEPKDYIVKLCKGNPKIA 195 Query: 202 LALFQGDNWQARETLC-QALAYSVPSGDWYSLLAALNHEQAPARLHWLAT----LLMDAL 256 L + + R+ + + L Y S D + + E+ +L L DAL Sbjct: 196 LDFYNKEVQNKRDYIFDKLLCYDGASFDLIKEFES-DFEKLKNDFEFLFKNIIYFLRDAL 254 Query: 257 --KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGD 292 K+ +TN D + E +N + S + +L D Sbjct: 255 FYKKTKSIELITNTDKLEKIIEFSNKHTISHIYKLLQD 292 >UniRef50_Q7NRQ8 DNA-directed DNA polymerase III, delta subunit n=1 Tax=Chromobacterium violaceum RepID=Q7NRQ8_CHRVO Length = 334 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 107/200 (53%), Gaps = 16/200 (8%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGHC 62 YPW D+ +L A + G A L G+G A L++ LLC+ P GH+ CG C Sbjct: 3 YPWQSADWTRLSAERERMPG--AWLFTGAAGIGKLAFAEHLAQSLLCESPAAGHQPCGQC 60 Query: 63 RGCQLMQAGTHPDYYTLAP-----EKGKNT--------LGVDAVREVTEKLNEHARLGGA 109 +GC+ +GTHPD+ L+P E+GK + ++AVREV + + A G Sbjct: 61 QGCRWFHSGTHPDFRRLSPFADEEEEGKEAKTTRKLPQIKIEAVREVIDFAHLTAHRAGR 120 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 +V+ V A L AAANALLK LEEPP F L + P+RLL T+RSRCR L P E Sbjct: 121 RVILVEPAESLNLAAANALLKILEEPPEAVLFLLVSHAPQRLLPTIRSRCRQFALTRPAE 180 Query: 170 QYAVTWLSREVTMSQDALLA 189 A+ WL + + +A LA Sbjct: 181 SAALAWLKEQGVANAEAELA 200 >UniRef50_B7S3H8 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S3H8_9GAMM Length = 329 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 99/322 (30%), Positives = 146/322 (45%), Gaps = 20/322 (6%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW + + G HAL++ LPG G L AL+R LLC P G +CG C Sbjct: 14 PWQGTTWARFNQQLADGNLPHALVLAGLPGSGKSRLALALARLLLCHAPNGGLNCGKCHS 73 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C++ AG+H D+ L PE+ + +D VREV + A G K+V + A + A Sbjct: 74 CEMSAAGSHGDFRWLQPEEKSRAIKIDQVREVVTFTTKTASFGDRKIVVLAPADAMNTNA 133 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 AN LLK+LEEP T+ L + L AT+RSRC+L + P + WL + T Sbjct: 134 ANGLLKSLEEPSPGTFLILVCDQLHGLPATVRSRCQLIKVPAPSLDSSRAWLD-QATGDS 192 Query: 185 DALLAALRLSAGSPGAALALFQ---GDNWQARETLCQALAYSVPSGDWYSLLAALNHEQA 241 D L L+ G P A A++Q G+ A C+ LA +G + AA +A Sbjct: 193 DESARLLDLADGMPMLAEAMYQRADGEKLIAIRAACRGLA----AGKLSANQAATMLAEA 248 Query: 242 PARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 P + +AL++ A+ + L E N + L L +V I+ + Sbjct: 249 P---------MDEALEQM---ARTARGSIKALDKENLNGQTGRCLYEFLDEVGKIQRAVR 296 Query: 302 SVTGINRELLITDLLLRIEHYL 323 NR+LL LL +++ L Sbjct: 297 GGANPNRQLLTEVLLEKLQSVL 318 >UniRef50_A0L8T4 DNA polymerase III, delta prime subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8T4_MAGSM Length = 343 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 14/330 (4%) Query: 11 FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-------PQGHK---SCG 60 + L + + GR H LL G+G AL R LCQQ G + CG Sbjct: 14 MDALTGAVRTGRLAHGLLFYGPAGVGKRLTARALVRRTLCQQVAEGALNAAGDRLLDGCG 73 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C+ ++ G HPD + E+G+ L VD +RE+ + + L KV + + +L+ Sbjct: 74 VCASCKRVEGGGHPDLLWMEKEQGRTRLRVDQIRELAQFVALTPLLSPYKVAVIDEVSLM 133 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 +AANALLKTLEEPP + L T P LL T+RSRC+ P EQ L + Sbjct: 134 NASAANALLKTLEEPPPHSLLILTTCTPGALLPTIRSRCQAVRFVPLDEQTLGQLLRQHT 193 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ 240 ++ + +A+ ++ GS G AL L G R+ L Q L + G + + + Sbjct: 194 SLEPGMVESAMEMAGGSIGRALELCDGTLLNQRQELWQGLVL-LQRGAGLDTVCEMAAQW 252 Query: 241 APARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 A +L++ ++H A + + D P + + + + L C + E Sbjct: 253 GSAERFENTVMLLEFWFQNHIRASLRDYD-PSVNQQELQASNRAWLSLAQQFACMVDE-- 309 Query: 301 MSVTGINRELLITDLLLRIEHYLQPGVVLP 330 + +NR L++ L +RI LP Sbjct: 310 ARIFNLNRPLMLEHLFIRISRLATQEGCLP 339 >UniRef50_A4A8H5 DNA polymerase III, delta prime subunit n=1 Tax=Congregibacter litoralis KT71 RepID=A4A8H5_9GAMM Length = 288 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 102/186 (54%), Gaps = 3/186 (1%) Query: 27 LLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKN 86 +L++ PG G + L AL+R+LLC QP +CG C+ C L +G PD ++ P + Sbjct: 1 MLLEGQPGTGRNRLALALARFLLCSQPGVEGNCGECKTCTLSASGALPDLLSVGPAEEGK 60 Query: 87 TLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATR 146 +G++A+REV LG KV+ +T A LT AA NA LK LEEP +ET+ L + Sbjct: 61 AIGINAIREVIRFAAGTPSLGRYKVILITPAESLTTAAFNAFLKCLEEPASETFIILVSA 120 Query: 147 EPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAA---LRLSAGSPGAALA 203 L AT+RSRC+ L P E+ A WL +E+ +A AA L L G P AL+ Sbjct: 121 RGFPLPATIRSRCQRWQLPSPEEEAAQEWLKKELGQQAEADGAASAMLELCNGRPLDALS 180 Query: 204 LFQGDN 209 QG+ Sbjct: 181 KLQGEE 186 >UniRef50_Q1H170 DNA polymerase III, delta prime subunit n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H170_METFK Length = 334 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 99/194 (51%), Gaps = 21/194 (10%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK-SCGHC 62 YPW +++L S + R HHALL++ G+G A L+ +LCQ P +CGHC Sbjct: 6 YPWHASAWQRLQRSSE--RRHHALLLKGKQGIGKLAFASTLANAMLCQSPSADGYACGHC 63 Query: 63 RGCQLMQAGTHPDYYTLAPE---------------KGKNTLGVDAVREVTE--KLNEHAR 105 C +HPDY L+PE + + V +RE+ +L+ H + Sbjct: 64 ISCGWFVQNSHPDYRLLSPEQEDIPETPAASKKPVRKSTQISVTQIRELAGFLELSSH-Q 122 Query: 106 LGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLA 165 G +VV + A L +ANALLK LEEPPA+ F L T P+ LL T+ SRC+ + Sbjct: 123 SHGMRVVVIHPADALNQTSANALLKMLEEPPADVMFILVTSHPQSLLPTIMSRCQQLEMP 182 Query: 166 PPPEQYAVTWLSRE 179 P EQ A+ WL ++ Sbjct: 183 VPSEQEALAWLEQQ 196 >UniRef50_C5V2Y1 DNA polymerase III, delta prime subunit n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2Y1_9PROT Length = 331 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/167 (38%), Positives = 87/167 (52%), Gaps = 13/167 (7%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK-SCGHC 62 YPW + D+ +L A + R LL Q + G+G L + +R LLCQ P G+ SCG C Sbjct: 5 YPWQKDDWTRLQALRE--RASQGLLFQGMKGIGKLDLAISYARALLCQHPSGNGFSCGVC 62 Query: 63 RGCQLMQAGTHPDYYTLAPE----------KGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 C G+HPD+ + PE K + VD +R +++ + A GG +VV Sbjct: 63 PSCHWFIQGSHPDFRMVQPESETEEVEAGKKPSRQISVDQIRALSDFMGMTAHQGGRRVV 122 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRC 159 + A + AANALLK LEEPP F L T +PE LL TL SRC Sbjct: 123 IIHPAEAMNTNAANALLKNLEEPPPGLLFILVTHKPEVLLPTLLSRC 169 >UniRef50_C0N2D2 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2D2_9GAMM Length = 308 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 2/187 (1%) Query: 18 YQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH-KSCGHCRGCQLMQAGTHPDY 76 +QA R HA+L+ + G+G A L LLCQQ ++CGHC CQL+ AG+H D+ Sbjct: 2 HQAQRMPHAILLSGIQGLGKRAFADTLIASLLCQQQTDQFEACGHCHSCQLLAAGSHSDH 61 Query: 77 YTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPP 136 + PE + VD +RE+ ++ K V +T A + +A N+LLK LEEP Sbjct: 62 TLITPEDIGKQIKVDQIRELKASQTLMPKVSHGKTVLITHADQMNLSAYNSLLKLLEEPQ 121 Query: 137 AETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV-TMSQDALLAALRLSA 195 + L + ++L T++SRC+ +A P E+ ++ WL ++ + + L+L+ Sbjct: 122 PNSVLILISENSQQLPITIKSRCQKIVIATPNEEESLDWLEQQAPHHDRKTWQSLLKLAH 181 Query: 196 GSPGAAL 202 G+P AL Sbjct: 182 GAPLHAL 188 >UniRef50_B2A325 DNA-directed DNA polymerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A325_NATTJ Length = 320 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 143/329 (43%), Gaps = 26/329 (7%) Query: 1 MRWYPWLRPDF---EKLVASY----QAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ- 52 + + W F EK+V + +G HA + G G +L + LLC+ Sbjct: 8 INFQTWSFDKFIGQEKIVKNLLRQLTSGNTGHAYMFVGPEGQGKGSLARIFAAGLLCESV 67 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 + CG C C ++ HPD T+ E ++ ++ VR+V + +N K+ Sbjct: 68 DENSGPCGICYSCSKLKKSIHPDLVTIGSES--KSIKIEEVRKVKQYINYRPTDSKKKIY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + A +T AN++LK LEEPP F L E ER+L T+ SRC++H P E+ Sbjct: 126 LIESAENMTREGANSILKMLEEPPEYVVFLLTVNELERMLPTVISRCQIHQFLPLTEEQL 185 Query: 173 VTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSL 232 LS SQ+ L A+ LS G G LA+ Q +++ Y + +S Sbjct: 186 YKALSNRTHASQEQLELAVSLSGGMIGRGLAILQDESY-----------YDMIK-KAHSF 233 Query: 233 LAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGD 292 + P L W + D++ ++ N+ ++E S ++L I+ Sbjct: 234 VEKFEKLTLPELLDWAEKI--DSMDNCEEFLELLNIVFKQKLSENQTSDSINKLARIMEI 291 Query: 293 VCHIREQLMSVTGINRELLITDLLLRIEH 321 + + QL+ T +NR L + ++++I+ Sbjct: 292 ILETKGQLL--TNVNRLLALEAMMVKIKE 318 >UniRef50_C6XDK0 DNA polymerase III, delta prime subunit n=2 Tax=Methylophilaceae RepID=C6XDK0_METSD Length = 340 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 89/253 (35%), Positives = 122/253 (48%), Gaps = 29/253 (11%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ--GHKSCGH 61 +PW + L+A Q HA+L++ G+G ALS+ LLCQQPQ GH +CG Sbjct: 8 FPWQHAVWAGLIA--QRKTLPHAMLLRGPAGIGKLQFAQALSKALLCQQPQADGH-ACGV 64 Query: 62 CRGCQLMQAGTHPDYYTLAPEKG---------------KNTLGVDAVREVTE--KLNEHA 104 C C G+HPD+ LAPE+ K + V VRE+ +L+ H Sbjct: 65 CASCGWFAQGSHPDFRLLAPEQDQADEDAPAPAKPTTKKTQISVAQVRELGGFLELSSHH 124 Query: 105 RLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYL 164 G ++ + A L A+ANALLK LEEPP F L +P+RLL T+ SRCR + Sbjct: 125 N-DGVRIALICPAEGLNVASANALLKMLEEPPPGVVFLLVAHQPQRLLPTITSRCRKVDM 183 Query: 165 APPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSV 224 P Q A++WL+ + + LA + GSP AA Q + + E + LA Sbjct: 184 PVPDMQGALSWLNGQGVDQAEVRLA---YAGGSPMAARD--QAEGSKPLELILAQLARGA 238 Query: 225 PSGDWYSLLAALN 237 D YSL LN Sbjct: 239 -GADAYSLATMLN 250 >UniRef50_Q081I0 DNA polymerase III, delta prime subunit n=14 Tax=Shewanella RepID=Q081I0_SHEFN Length = 327 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 94/313 (30%), Positives = 144/313 (46%), Gaps = 23/313 (7%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PWL ++ V + G+ HA L +G D L A ++ +LCQQ +CG C+ Sbjct: 10 PWLADPHQRFVDQHYRGKSSHAHLFNIDKALGGDKLAKAAAQTVLCQQLTPVGACGQCKS 69 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C L+ AG HPD Y + P+ N + VD +R++ + L + A+ GGA+V + +A L AA Sbjct: 70 CLLLAAGNHPDLYIIEPDG--NQIKVDQIRQLCQALTQTAQQGGARVAIIVNAERLNLAA 127 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM-- 182 ANALLKTLEEP + L T +LLAT+ SRC+ P + WL+ + + Sbjct: 128 ANALLKTLEEPGDDVVLILQTNTSAQLLATITSRCQTLNFVEPTKHEIHQWLATQQLLPP 187 Query: 183 -SQDALLAALRLSAGSPGAALAL---FQGDNWQARETLCQALAYSVPSGDWYSLLAALNH 238 + D + + G LAL ++Q T Q A S+ +G + L ++ Sbjct: 188 ANADGKIHDVTWCLSVVGGPLALANSLTSQHYQQLLTFRQDWAQSLQTGHLSNSLLKVSE 247 Query: 239 EQAPARLHWL------ATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGD 292 +Q L+ L L + +K + + Q N V V ELA + Sbjct: 248 QQIVDALNVLYLYLRQYVLKSNKVKTENTSRQSLNPLVQSKVIELAGRVMT--------- 298 Query: 293 VCHIREQLMSVTG 305 +CH E + SV Sbjct: 299 MCHRLETMPSVNA 311 >UniRef50_Q47DZ6 DNA polymerase III, delta prime subunit n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DZ6_DECAR Length = 339 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 97/194 (50%), Gaps = 17/194 (8%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHK-SCGHCRGCQLMQAGTHPDYYTLAP-- 81 H+LL+ G+G L + LLC+ PQ + +CG C C + G HPD+ L P Sbjct: 23 HSLLLVGQKGLGKFELARRFAASLLCESPQSNGLACGKCLACNWFEQGNHPDFRLLQPDA 82 Query: 82 -------EKGKNT----LGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLK 130 E GK + +D VR + E N GG ++V V + + AN+LLK Sbjct: 83 LGEDVEVEDGKKKPSQQITIDQVRALDEFFNVGTHRGGLRIVIVNPTEAMNRSTANSLLK 142 Query: 131 TLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAA 190 TLEEP A+T F L + EP RLL T+RSRC++ + P + A L+ E + LA Sbjct: 143 TLEEPSADTLFLLVSSEPMRLLPTIRSRCQVVPVPVPSAKLAGKILADEGLQQSERWLA- 201 Query: 191 LRLSAGSPGAALAL 204 L+ GSP AL L Sbjct: 202 --LAGGSPVLALDL 213 >UniRef50_D0L216 DNA-directed DNA polymerase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L216_HALNC Length = 361 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 26/231 (11%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP----QGHKSCG 60 PWLR +++ + ++ R H LL+ G+G L ++ YLLC P ++CG Sbjct: 40 PWLRAPWDRFLLMHRQDRLPHGLLVTGASGLGSLTLAREMAAYLLCADPVTTPGAERACG 99 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C+L AGTHPD L + + V+ +R + E+ + R G +V + A + Sbjct: 100 QCAACRLRLAGTHPDIQLLVRDNASKDISVEDIRTLIERFS-LTRYGPLRVALIEQAERM 158 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 +AAN LLK LEEPPA + F + + + L +T+RSR + + P V WL++ Sbjct: 159 NRSAANGLLKLLEEPPAGSLFLMTSERADLLPSTIRSRIQRLTMTVPRRAVIVDWLTQRY 218 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYS 231 +S + A L F GD+ + + S PS DW S Sbjct: 219 GLSTEE-------------AELLWFIGDD--------RLMDGSPPSWDWQS 248 >UniRef50_A9A090 DNA polymerase III, delta prime subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A090_DESOH Length = 332 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 90/294 (30%), Positives = 134/294 (45%), Gaps = 21/294 (7%) Query: 25 HALLIQALPGMGDDALIYALSRYLLC-----QQP--------QGHKSCGHCRGCQLMQAG 71 HA L + G+G + + C ++P G CG CR C+ + AG Sbjct: 21 HAFLFTGIDGIGKRSAAMGFAMACNCLAAVQEKPLPVPVPGDSGLPFCGTCRICRAIAAG 80 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 THPD T+APE N + + +RE+ EK+ + V ++DA + AANALLK+ Sbjct: 81 THPDVITIAPEG--NAIKIGRIRELIEKVAFRPHEAKMRAVIISDAWAMNPEAANALLKS 138 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAAL 191 LEEPP +T FFL LL T+ SRCR AP +L + + + A +A Sbjct: 139 LEEPPPQTLFFLTAEHASDLLPTVVSRCRHIRFAPVSADRIAAFLQQHHGVDEKAARSAA 198 Query: 192 RLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLA-----ALNHEQAPARLH 246 +S GS ALAL R+ L LA ++PS +LA N +Q L Sbjct: 199 LMSGGSVARALALTDVPLGAWRQWLAAELA-ALPSRPVPLVLAFAEKLQKNKDQIGQWLG 257 Query: 247 WLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + T L DA+ + ++ N+D+ VA L+ S + L + V + + L Sbjct: 258 MIQTCLYDAVVWKYQPGRIMNIDMTDAVAALSEQESIASLGRKIDAVVAMEKAL 311 >UniRef50_A6SZH8 DNA polymerase III delta' subunit n=2 Tax=Oxalobacteraceae RepID=A6SZH8_JANMA Length = 344 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 113/261 (43%), Gaps = 36/261 (13%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQP--QGHKSCGHCRGCQLMQAGTHPDYYTLAPE 82 HA+L G+G A A ++ LLC+ P GH +CG C C +HPDY + PE Sbjct: 25 HAILFHGAEGIGKTAFAEAFAQSLLCETPAADGH-ACGSCIACGWFTQYSHPDYRRVRPE 83 Query: 83 -------------------KGKNT------LGVDAVREVTEKLNEHARLGGAKVVWVTDA 117 K K T + +D +R + + +N G +VV + A Sbjct: 84 ILDDGDSAEGEDAEAADTKKAKTTKAPSKEIKIDQIRALGDFMNISTHRSGMRVVVLYPA 143 Query: 118 ALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS 177 +L AAAN+LLK LEEPP +T F L + +RLL T+ SRCR LA P A+ WL Sbjct: 144 EVLNTAAANSLLKMLEEPPPQTMFLLVSNSLDRLLPTILSRCRKFALALPGRDEALQWLK 203 Query: 178 REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAA-- 235 + D LA GA LA F RET+ L G +L AA Sbjct: 204 SQQVSEADGWLAE------QGGAPLAAFDASQAGMRETMDDFLRQLAQPGVDGALKAADR 257 Query: 236 LNHEQAPARLHWLATLLMDAL 256 L P + WL L D L Sbjct: 258 LQKTPVPELVAWLQRWLYDVL 278 >UniRef50_Q0F3S2 DNA polymerase III subunit delta n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3S2_9PROT Length = 324 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/231 (32%), Positives = 110/231 (47%), Gaps = 21/231 (9%) Query: 13 KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT 72 + + + R HHA L+ + G+G L L+ L+C H CG C GC+++ AG+ Sbjct: 16 RFTEALKQQRMHHAWLLYGMKGIGKRMLAERLTGLLMCD---SHNDCGECHGCRMLAAGS 72 Query: 73 HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTL 132 HPD Y + +GK + ++ VR++ L+ G +VV + DA L AANALLK L Sbjct: 73 HPDVYRVGLAEGKRDVNIEQVRQMLGFLSLSGSEGERRVVILDDAERLNHQAANALLKGL 132 Query: 133 EEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQD-----AL 187 EEP A + + + ERL AT+RSRC L P E L + + L Sbjct: 133 EEPSAGSVLLMVCADLERLPATIRSRCMLQQCMPLAEHDVRRILDASLMEGDNKPDVATL 192 Query: 188 LAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNH 238 A+ L+ G PG +L Q ++ LA W +L+A L+H Sbjct: 193 ELAVELAEGCPGMVASL------QDKKIADALLA-------WQALIAQLDH 230 >UniRef50_Q482J4 DNA polymerase III, delta prime subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q482J4_COLP3 Length = 331 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 97/192 (50%), Gaps = 27/192 (14%) Query: 13 KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG----------HKSCGHC 62 +L YQ HA++IQ + G G AL L L+CQ P ++CG C Sbjct: 11 QLSRQYQQDTLAHAIIIQGIEGAGQGALAKWLIELLICQNPLSTTNAAGTETISEACGQC 70 Query: 63 RGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD 122 + C L ++ +PD+ L E TLGVD +R L + A LG K + + A ++T Sbjct: 71 KACLLKKSDNYPDHLLLKSEN--KTLGVDDIRRGNAFLEKTAHLGKVKTILIPQAQVMTI 128 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM 182 AAANALLKTLEEP A ++ L T + + LL T+ SRC ++ + P M Sbjct: 129 AAANALLKTLEEPSANSYIVLITDDLDSLLPTIISRCAVYAIRP---------------M 173 Query: 183 SQDALLAALRLS 194 +ALLA L++S Sbjct: 174 IGEALLAQLKVS 185 >UniRef50_Q31HQ8 DNA polymerase III, delta prime subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HQ8_THICR Length = 325 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 100/181 (55%), Gaps = 9/181 (4%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQP--QGHKSCGHCRGCQLMQAGTHPDYYT 78 G+G+ L+ G+G +++ LLCQ QG ++C HC Q QA THPD++ Sbjct: 21 GQGY---LLSGAEGIGLSEFAMSMAEGLLCQTNALQGCQNCVHCH--QFAQA-THPDFFQ 74 Query: 79 LAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAE 138 L + K + +D +R +T+K+ + GG KV + LL +A NALLKTLEEPPA+ Sbjct: 75 LTVLEDKKEISIDQIRALTDKIYTTSHQGGYKVALIEQVELLNVSAFNALLKTLEEPPAK 134 Query: 139 TWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALL-AALRLSAGS 197 T L + + L AT+ SRCR A PP + A+ WL + + + LL AL+++ G Sbjct: 135 TILILTSYQTSLLPATIISRCRKIAFASPPREEALAWLQQALPQADMPLLKKALKINWGG 194 Query: 198 P 198 P Sbjct: 195 P 195 >UniRef50_UPI0001BCD908 DNA polymerase III, delta prime subunit n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD908 Length = 350 Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 80/241 (33%), Positives = 113/241 (46%), Gaps = 15/241 (6%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPE-- 82 HALL G+G + L+R LLC + G CGHC C+ M+AG HPDY+ PE Sbjct: 48 HALLFTGAEGVGKRRTAHVLARTLLCAK-GGDAPCGHCDSCRTMEAGVHPDYFEAVPEAR 106 Query: 83 -KGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWF 141 KG + DAVRE+ + +++ + DA + + AAN LLKTLEEP E F Sbjct: 107 GKGAAAIRTDAVREILVAASGAPISARRRIILIDDADRMNETAANRLLKTLEEPSGEVIF 166 Query: 142 FLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAA 201 L T E +L T+RSR P T L+ T + + + A L+ GS G A Sbjct: 167 ILVTSACEAILPTIRSRAVRIAFGALPRTELETALAERGTDNGETIAA---LADGSLGRA 223 Query: 202 LALFQGDNWQARETLCQALAYSVPSGDWYSL------LAALNHEQAPARLHWLATLLMDA 255 AL + R+ + LA +P+ + + A HE+ A L + T + D Sbjct: 224 YAL-AAEGLSLRDDALRVLA-ELPALSMEDIWRYAEKIGAYTHEERRAWLGYFQTAMRDL 281 Query: 256 L 256 L Sbjct: 282 L 282 >UniRef50_Q3IHC2 Putative DNA polymerase III delta' subunit n=2 Tax=Alteromonadales RepID=Q3IHC2_PSEHT Length = 304 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 10/163 (6%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC----QQPQGHKS-- 58 PWL ++L S++A R HHA L G+G A L+ LLC +Q KS Sbjct: 4 PWLHDIEQRLTQSFKAQRFHHAQLFSGPIGVGKFAFASQLANALLCNNIAEQVAAKKSVL 63 Query: 59 --CGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTD 116 CG C+ C L++AGTHPD L G+ ++GVD +R +++ ++ A G KV + + Sbjct: 64 SACGQCKSCLLIKAGTHPDK-RLTQVDGQ-SIGVDDIRGISDFMHHSAAQNGNKVAIIEN 121 Query: 117 AALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRC 159 +T AAANALLKTLEEP + L + + +L AT+ SRC Sbjct: 122 CEKMTTAAANALLKTLEEPSQSRFLILTSSQATQLPATVLSRC 164 >UniRef50_B1Y019 DNA polymerase III, delta prime subunit n=3 Tax=Proteobacteria RepID=B1Y019_LEPCP Length = 360 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 109/241 (45%), Gaps = 37/241 (15%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK----SCG 60 PWL + +A+ ++ HALL+ G+G + AL+R LC+ P G + +CG Sbjct: 25 PWLAEPLAQTLATQRS----HALLVHGPTGVGQFEMALALARSWLCETPAGERPAGLACG 80 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLG----------------------VDAVREVTE 98 C C L+ +HPD L PE + +G V+ +R Sbjct: 81 RCGSCHLVDEHSHPDLRLLVPEAMRAQVGLDADDAASDDDGKKRKPSREIKVEQIRAAIN 140 Query: 99 KLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSR 158 A KV+ V A L AANALLKTLEEPP F LA+ P+ L AT+RSR Sbjct: 141 FSELTAGRASLKVLVVYPAEALNTVAANALLKTLEEPPGTLRFVLASAAPQALPATVRSR 200 Query: 159 CRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARE 214 C+ L PPP A+ WL + LLAA S P AALA Q G +W A Sbjct: 201 CQSVPLRPPPADQALAWLESQGVAQAGVLLAA---SGQQPLAALAHHQAGLDGASWLALP 257 Query: 215 T 215 T Sbjct: 258 T 258 >UniRef50_C9RA67 DNA polymerase III, delta prime subunit n=1 Tax=Ammonifex degensii KC4 RepID=C9RA67_AMMDK Length = 320 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 96/187 (51%), Gaps = 7/187 (3%) Query: 19 QAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYT 78 + GR HA L G+G + +LC P+ + CG CR C+L + G HP+YY Sbjct: 21 ETGRIAHAYLFSGPEGVGKRTTAEFFACSILCLAPR-ERPCGECRSCRLFRMGNHPNYYF 79 Query: 79 LAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAE 138 LAPE+G +LG+ V+E+ K+ A G +V + A LT A NA+LK LEEPP Sbjct: 80 LAPEQG-GSLGIALVKELLSKVYRSA--SGYRVAVIDQAESLTLEAQNAMLKLLEEPPRL 136 Query: 139 TWFFLATREPERLLATLRSRCR-LHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGS 197 F L T + E LL T+ SRCR + + P A R + A LA+ LS GS Sbjct: 137 VCFLLVTSQKEALLPTVVSRCREVKFGRLPRSVVAACLKERGFPPEEAACLAS--LSGGS 194 Query: 198 PGAALAL 204 G AL L Sbjct: 195 LGKALTL 201 >UniRef50_C9KNC0 DNA polymerase III, delta prime subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNC0_9FIRM Length = 334 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 97/319 (30%), Positives = 152/319 (47%), Gaps = 19/319 (5%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 E L + GR HALL G+G + L+ +LC G CGHC C+ MQ G Sbjct: 16 EALRTMLREGRLPHALLFTGPDGIGKRMVGRVLAAAILCDAEDG--PCGHCESCRAMQLG 73 Query: 72 THPDYYTLAPEK-GKNT--LGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANAL 128 +HPDY + PE+ GK+ + ++A+R + +++ + L + V + DA + +AA N+L Sbjct: 74 SHPDYLEVVPEQNGKSAAQIRIEAIRSMQTQVSRYPVLAKRRTVLIDDADRMNEAAQNSL 133 Query: 129 LKTLEEPPAETWFFLATREPERLLATLRSRCR-LHYLAPPPEQYAVTWLSREVTMSQDAL 187 LKTLEEP F L T LL T+ SRC + + P++ L +V ++ A Sbjct: 134 LKTLEEPEGPVTFILVTSARSALLDTILSRCMPVAFGMLSPQEMRSVLLQHDVPEAEAAE 193 Query: 188 LAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSL------LAALNHEQA 241 LAA LS GS G AL L + + R+ LA +PS D + + A + E Sbjct: 194 LAA--LSDGSLGRALLLHEHEGLHLRDEALDFLA-QLPSFDMERVWSLAADMGARDRESL 250 Query: 242 PARLHWLATLLMD--ALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 +L LL D L G+ + + D+ + L R+ A+L +V ++ + Sbjct: 251 REYFLYLNMLLRDLLVLAEDGGSPLLYHGDIRAKLLALLPTYPEGRVFALLAEVREVQRR 310 Query: 300 LMSVTGINRELLITDLLLR 318 L + +N LL+ L+R Sbjct: 311 LQA--NVNLRLLMEGFLIR 327 >UniRef50_B2V5N0 DNA polymerase III, subunits gamma and tau n=4 Tax=Hydrogenothermaceae RepID=B2V5N0_SULSY Length = 501 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 9/193 (4%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA 80 R HA + G+G + LS+ L C+ P ++SC C C + G+ PD Y + Sbjct: 35 DRVSHAYIFSGPRGVGKTTIARILSKVLNCKNPVDYESCNQCENCIEIDKGSFPDMYEID 94 Query: 81 PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETW 140 + G+D +R + + + G KV + +A +LT A NALLKTLEEPP Sbjct: 95 AASNR---GIDDIRMIRDNVGYQPIKGKYKVYIIDEAHMLTKEAFNALLKTLEEPPPRNI 151 Query: 141 FFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR-----EVTMSQDAL-LAALRLS 194 F LAT E ++ T++SRC+ PP ++ +L R ++ +DA+ L A L Sbjct: 152 FILATTELYKIPETIKSRCQTFIFKPPTKEQIKNYLLRILNNEKIPYEEDAVELLAQELE 211 Query: 195 AGSPGAALALFQG 207 G +A L Q Sbjct: 212 GGMRDSASLLDQA 224 >UniRef50_B4RK44 DNA polymerase III subunit delta n=28 Tax=Neisseriaceae RepID=B4RK44_NEIG2 Length = 325 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 18/227 (7%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGHC 62 YPW + + + +A + R + A L G G A ++ LLC+ P G K CG C Sbjct: 3 YPWHQEQWRQ-IAEHWTSRPN-AWLFVGKKGTGKTAFARFAAKALLCETPAPGCKPCGEC 60 Query: 63 RGCQLMQAGTHPDYYTLAP-----EKGKNTL--GVDAVREVTEKLNEHARLGGAKVVWVT 115 C L G+HPD+Y + P E G+ L +DAVRE+ + + + GG +V+ + Sbjct: 61 MSCHLFGRGSHPDFYEITPLADEPENGRKLLRIKIDAVREIIDNVYLTSVRGGLRVILIH 120 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 A + AAN+LLK LEEPP + F L + +++L T++SRCR L P A+ + Sbjct: 121 PAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTIKSRCRKKVLPAPSHGEALAY 180 Query: 176 L-SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALA 221 L R V ++ L A GA L +G+ + R L + LA Sbjct: 181 LRDRGVAEPEERL-------AFHSGAPLFQEEGELRELRAKLLEILA 220 >UniRef50_C0WCP0 DNA polymerase III delta' subunit n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCP0_9FIRM Length = 326 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 90/315 (28%), Positives = 140/315 (44%), Gaps = 18/315 (5%) Query: 19 QAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYT 78 Q R ALL G+G L Y +R LC H C CR C+ +HPD+ Sbjct: 20 QGERKTPALLFYGPDGIGKKKLAYEFARSFLCLDDPTHDDC-KCRSCRAFCGESHPDFIY 78 Query: 79 LAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAE 138 + + ++ + ++ ++EV +K L KV + A + + A+N+LLK LEEPP Sbjct: 79 VEGQGARHDILIEQIKEVEKKAVFSPVLSPYKVCLIDGADRMREEASNSLLKLLEEPPTY 138 Query: 139 TWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSP 198 F L E R+L T+RSR P + AV + E+++ Q LA RLS GSP Sbjct: 139 WLFILVASEISRILPTIRSRLMAIRFEPLHREKAVRVME-ELSVPQGETLA--RLSDGSP 195 Query: 199 GAALALFQGDN--WQARETLCQA------LAYSVPSGDWYSLLAALNHEQAPARLHWLAT 250 G AL L + + W+ R L S+ +W L ++ +Q L L Sbjct: 196 GKALHLAEAEALMWRERALFIMEGIEDPYLMASLARLEW---LGDMDVDQTQTFLEMLLL 252 Query: 251 LLMDALKRHHGAAQVT-NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRE 309 +L DA+ G+ + N D +A + + S L+ L + R L G+N Sbjct: 253 ILRDAMMIQEGSGLLLYNEDERERIASIFASFTLSALKKSLLETE--RFYLGLNKGVNTR 310 Query: 310 LLITDLLLRIEHYLQ 324 +++ L L I +L+ Sbjct: 311 MILEALFLEIHTFLK 325 >UniRef50_Q1GTQ0 DNA polymerase III, delta prime subunit n=1 Tax=Sphingopyxis alaskensis RepID=Q1GTQ0_SPHAL Length = 326 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/231 (32%), Positives = 101/231 (43%), Gaps = 13/231 (5%) Query: 17 SYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH------KSCGHCRGCQLMQA 70 +Q GR HHA L+ GMG +R+L+ G G +L+ A Sbjct: 14 GWQGGRLHHAWLLAGPQGMGKGDFAERAARFLVTHGAGGGRAAVALDDRGDDAAARLVDA 73 Query: 71 GTHPDYYTLAPEKGKNT------LGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 G HP+ L + T + +D VR+V +L+ LG +V+ V L Sbjct: 74 GNHPEIIRLTRQPKDKTKELARNITIDQVRQVIRRLHLSLSLGDWRVIIVDAVDDLESDG 133 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-SREVTMS 183 ANALLKTLEEPPA T F L + P RLL T+RSRCR+ P V+WL + Sbjct: 134 ANALLKTLEEPPARTLFLLVSHSPGRLLPTIRSRCRILRFQPIDRDVMVSWLHDLRPMLD 193 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLA 234 + A + S G PG ALAL D ++ L A P LA Sbjct: 194 MPEVRAIVAASGGVPGKALALIDSDVASMQKKLLAIAASGDPENRLREALA 244 >UniRef50_Q2RMF7 DNA-directed DNA polymerase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RMF7_MOOTA Length = 284 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 84/149 (56%), Gaps = 2/149 (1%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 ++L + AG+ HA L+ G A L+ L C+ QG + CG C C+ M G Sbjct: 5 QQLKQALLAGKLAHAYLLVGGSEEGRRAEAIYLATALNCRYLQGGEPCGSCHSCRQMAGG 64 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 HPD+Y L P +G N L + +RE+ +L A GG KV + A +T+AAAN LLKT Sbjct: 65 NHPDFYLLEP-RGTN-LKIAQIRELEARLALQAFQGGVKVAVLAGADTMTEAAANCLLKT 122 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCR 160 LEEPP T+ L +P+ LL T+RSRC+ Sbjct: 123 LEEPPEGTYLILLAAQPDPLLPTIRSRCQ 151 >UniRef50_B0MFK9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MFK9_9FIRM Length = 335 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 107/234 (45%), Gaps = 18/234 (7%) Query: 19 QAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYT 78 Q G+ HA L+ G G L A ++ LLC++ H+ CG C C+ G HPD Sbjct: 27 QTGQISHAYLLNGEDGSGKMTLAKAFAKALLCEK---HEGCGQCTPCRQADTGNHPDLIY 83 Query: 79 LAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPA 137 + EK + + VD +R+ + E ++ K+ V DA + A NALLKTLEEPP Sbjct: 84 ITHEKYE--IRVDEIRQGINETIDIKPYSSNYKIYIVDDADRMNVGAQNALLKTLEEPPE 141 Query: 138 ETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGS 197 L T +RLL T+ SRC L PE +L +D + A+ S G+ Sbjct: 142 YAVILLLTNNKDRLLETILSRCVCMSLGTVPEDQIRDYLKEHTQADEDMIDFAVSFSLGN 201 Query: 198 PGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLATL 251 G A+ + + + E L +AL +L ++H + + +L TL Sbjct: 202 LGKAVHV--AETKEFHEMLNEALG----------MLGYIHHIELHEMISYLKTL 243 >UniRef50_Q3SIN0 DNA polymerase III delta prime subunit n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIN0_THIDA Length = 327 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 111/228 (48%), Gaps = 15/228 (6%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKS-CGHC 62 YPWL P +++L+A+ R ALL+ G+G AL +R LLC+ P+ S CG C Sbjct: 5 YPWLEPVWQRLLATRS--RPAQALLLAGPRGVGKSALALEWARALLCEAPRPDGSACGVC 62 Query: 63 RGCQLMQAGTHPDYYTLAPEKGKNTLG---------VDAVREVTEKLNEHARLGGAKVVW 113 C + G HPD+ + ++ + G VD R+ + + G +VV Sbjct: 63 PACHWFETGAHPDFRRVGLQEKTSKEGETRLATAIEVDQARDAVDFVQLSTYRAGYRVVL 122 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 V A L AAANALLK LEEPP T F L +P RLL T+RSRC + P A Sbjct: 123 VDPADSLNLAAANALLKVLEEPPLNTVFVLVADQPRRLLPTIRSRCTRLDVGLPALAQAT 182 Query: 174 TWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALA 221 WL + LLA L+ G+P AAL +G+ R + + LA Sbjct: 183 AWLGEQGVDDAPTLLA---LAGGTPLAALGWCEGEVLDERRGVLEGLA 227 >UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUL1_HALO1 Length = 649 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 8/196 (4%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L ++ R HHA L G+G L + L C++ + CG C C+ + GT Sbjct: 28 LANAFAKDRVHHAFLFCGPRGVGKTTAARILGKALNCERGPTAEPCGSCVACETITNGTA 87 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 DY+ + G + G+DA+RE+TE + + KV + + +LT A NALLKTLE Sbjct: 88 VDYFEM---DGASNRGIDAIRELTEAVRYQPAVLRKKVYVIDEVHMLTTEAFNALLKTLE 144 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLH--YLAPPP---EQYAVTWLSREVTMSQDALL 188 EPP F LAT EP ++ T+ SRC+ + L P P E + + E+ + A+ Sbjct: 145 EPPPHVSFVLATTEPHKVPNTILSRCQRYDFKLVPAPKLIEHLRRIFAAEEIEVDSGAIS 204 Query: 189 AALRLSAGSPGAALAL 204 +R S GS +L+L Sbjct: 205 LIVRESGGSVRDSLSL 220 >UniRef50_C4V4M8 DNA polymerase III, delta prime subunit n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4M8_9FIRM Length = 346 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 86/273 (31%), Positives = 123/273 (45%), Gaps = 24/273 (8%) Query: 20 AGRGH--HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYY 77 A GH HAL+ G+G L+R LLC +G+ CG C C++ AG HPDY+ Sbjct: 38 AADGHLPHALIFTGAAGIGKRRTARVLARTLLCA-AEGNAPCGRCDDCRMTAAGVHPDYF 96 Query: 78 TLAPE---KGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEE 134 + PE KG + DAVR++ +E + G +++ + + + AAN LLKTLEE Sbjct: 97 EVIPEARGKGAAMIRADAVRDILIAASESPQRAGRRIILIDGVHSMNEVAANRLLKTLEE 156 Query: 135 PPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLS 194 PPA F L T + +L T+RSR P P L R + + A L+ Sbjct: 157 PPATVLFLLVTDAWDAVLPTIRSRAVRIAFGPLPRAEIAAELQRRGIAHAETIAA---LA 213 Query: 195 AGSPG-----AALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLA 249 GS G AA L D+ + T+ + L D + L R WL Sbjct: 214 DGSLGRAETLAAEGLSLRDDALSFLTILETLRIE----DIWKHAEQLGGRSYDERAAWLG 269 Query: 250 TLLMDALK-----RHHGAAQVTNVDVPGLVAEL 277 L M AL+ R + AA++ +VD + EL Sbjct: 270 YLQM-ALRDLLVLRENAAAELYHVDRRAELTEL 301 >UniRef50_Q6AQ60 Related to DNA polymerase III, delta subunit n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ60_DESPS Length = 338 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 8/192 (4%) Query: 17 SYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDY 76 + +A R HA L + G+G ++ L C++ QG +CGHC C+ + +G HPDY Sbjct: 27 AIEADRVPHAYLFKGPDGVGKKLFARGVAAALNCRERQGAFACGHCVSCRKLLSGNHPDY 86 Query: 77 YTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPP 136 + P+KG + +D VR + L+ +VV + D + AAN+LLKTLEEPP Sbjct: 87 TVVQPDKG--AIKIDQVRSLCRDLSFPPYESPVRVVVLEDVHTMRREAANSLLKTLEEPP 144 Query: 137 AETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE----VTMSQDALLAALR 192 L +L T+ SRC++ P E T L + + ++ LLA R Sbjct: 145 QNNVLILTAESSCEILTTISSRCQVVSFYPLTENEVSTALQGKELPPLAENEQGLLA--R 202 Query: 193 LSAGSPGAALAL 204 L+ GSPG L L Sbjct: 203 LAEGSPGKMLLL 214 >UniRef50_Q7UK75 DNA polymerase III, tau/gamma subunit n=1 Tax=Rhodopirellula baltica RepID=Q7UK75_RHOBA Length = 376 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 109/237 (45%), Gaps = 24/237 (10%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK--SCGHCRGCQLMQAG 71 L A+ + GR +LL G+G + L++ LLC++ CG C C ++ G Sbjct: 43 LTAAIRQGRLGGSLLFVGPNGVGKTSAAILLTQTLLCERSTARDMAPCGECPSCVQVRVG 102 Query: 72 THPDYYTLAPEKGKNTLGVDA-VREVTEKLNE------HARLGGA--KVVWVTDAALLTD 122 THPD+ + K + ++ + V +L E H R A KV + DA L + Sbjct: 103 THPDFIQVRKPDDKTLIPLELLIGPVDARLQEGFCHDVHLRPMQAQRKVAILHDADFLNE 162 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV-- 180 AN LLKTLEEPPA L +R L T+RSRC++ PP + L +++ Sbjct: 163 EGANCLLKTLEEPPANALIILIGSSEQRQLPTIRSRCQVLRFQTPPGEAGRALLRKQLDH 222 Query: 181 -----------TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPS 226 TMS DAL AA+ LSAG A L +G Q RE L LA VP Sbjct: 223 YQSQHEEESLPTMSDDALDAAIELSAGDMHVAARLARGGGEQIREALWNQLAAPVPD 279 >UniRef50_Q12AK7 DNA-directed DNA polymerase n=5 Tax=Comamonadaceae RepID=Q12AK7_POLSJ Length = 379 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 86/199 (43%), Gaps = 28/199 (14%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PWL+ E L+A RGH A L+ G+G L AL+R LC+QP +CGHC Sbjct: 21 PWLQTQLESLLAQ----RGH-AWLLSGPSGLGQFDLAQALARAWLCEQPTPQGACGHCGS 75 Query: 65 CQLMQAGTHPDYYTLAPE-----------------------KGKNTLGVDAVREVTEKLN 101 C + TH D L PE K + VDA RE Sbjct: 76 CHAVDVHTHADLCLLVPETLSLALGWPLDEKTQDELDSKKRKPSKEIKVDAAREAVSFTQ 135 Query: 102 EHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRL 161 G KVV V A + AN LLKTLEEPP F LAT +LL T+RSRC Sbjct: 136 FTRSRGTTKVVLVFPAERMNHITANTLLKTLEEPPGPVKFILATDAAHQLLPTIRSRCLG 195 Query: 162 HYLAPPPEQYAVTWLSREV 180 H + P A WL +E Sbjct: 196 HTMLWPDFAQASAWLQQEA 214 >UniRef50_UPI00016C36A8 DNA polymerase III, delta prime subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C36A8 Length = 338 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 82/265 (30%), Positives = 117/265 (44%), Gaps = 18/265 (6%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH-KSCGHCRGCQLMQAGT 72 A+ +AGR H+ L+ G+G L++ LC+ P +C C C + GT Sbjct: 16 FAAALEAGRLAHSYLLVGPDGVGKRQFARELAKAFLCEHPPAKLTACDRCPACAQVNVGT 75 Query: 73 HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTL 132 HPD L + K+ L VD +R ++ G K+ V DA ++AN+ LKTL Sbjct: 76 HPDLLFLRTPEDKHELPVDEMRAFCAQIALKPTRGPRKIGIVEDADDFNASSANSFLKTL 135 Query: 133 EEPPAETWFFLATREPERLLATLRSRCRLHYLAP--PPEQYAV-TWLSREVTMSQDALLA 189 EEPP L +R L+T+ SRC++ AP P + AV + + +D L Sbjct: 136 EEPPQGALLLLIGTSIDRQLSTILSRCQIVRFAPLSPADLKAVLAEQGIDDPVKRDRL-- 193 Query: 190 ALRLSAGSPGAALALFQGDNWQARETLCQALAYSVP-----SGDWYSLLAALNHEQAPAR 244 +L AGS ALAL WQ R+ L + L P + W E AP R Sbjct: 194 -AKLGAGSVTRALALDDDSIWQVRQKLLEGLMSPRPPFQQLADVWARFNEEAGKETAPQR 252 Query: 245 ------LHWLATLLMDALKRHHGAA 263 L +L + +ALK GAA Sbjct: 253 LRTSLVLQFLIEAVQNALKLSLGAA 277 >UniRef50_C1CYE9 Putative DNA polymerase III, subunits gamma and tau n=1 Tax=Deinococcus deserti VCD115 RepID=C1CYE9_DEIDV Length = 762 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 5/150 (3%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L A+ + GR HA L G+G ++ C P K CG C C ++AG+H Sbjct: 26 LRAALEQGRVGHAYLFSGPRGVGKTTTARLIAMTANCSGPL-PKPCGECESCLSVRAGSH 84 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + + VD VR++ EK++ A GG K+ + +A +++ AA NALLKTLE Sbjct: 85 PDVLEI---DAASNNSVDDVRDLREKVSLAAMRGGKKIYILDEAHMMSRAAFNALLKTLE 141 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHY 163 EPP+ F LAT EPE+++ T+ SRC+ HY Sbjct: 142 EPPSHVIFILATTEPEKIIPTILSRCQ-HY 170 >UniRef50_Q8EU50 DNA polymerase III delta subunit n=1 Tax=Oceanobacillus iheyensis RepID=Q8EU50_OCEIH Length = 329 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 9/214 (4%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 ++ S GR HA L+Q G G + L++YL C +G C C C+ + +G H Sbjct: 18 IINSINKGRVSHAYLLQGERGTGKRDIALLLAKYLFCLHREGANPCHTCNNCKRIDSGNH 77 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + + P+ ++ ++ VR + ++ KV + DA LT AAN LLK LE Sbjct: 78 PDLHWIEPDG--QSIKIEQVRNLQKEFTYSGMESNQKVYVIQDADTLTVNAANRLLKFLE 135 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAP-PPEQYAVTWLSREVTMSQDALLAALR 192 EP +T + T +L+T+RSRC++ L P PP+ V + LL+AL Sbjct: 136 EPSKQTTAIMLTENGHSILSTIRSRCQIIELQPLPPDVMNQRLQDEGVHHLEANLLSAL- 194 Query: 193 LSAGSPGAALALFQGDNW--QARETLCQALAYSV 224 + AL+L Q D W AR+ + Q + V Sbjct: 195 --TNNTKEALSLHQ-DEWFAGARKIVVQLIEMYV 225 >UniRef50_Q1IWF5 DNA polymerase III, subunits gamma and tau n=3 Tax=Deinococcus RepID=Q1IWF5_DEIGD Length = 737 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 5/150 (3%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L A+ + GR HA L G+G ++ C P K CG C C ++ G+H Sbjct: 26 LKAALEQGRVGHAYLFSGPRGVGKTTTARLIAMTANCTGPS-PKPCGECESCLAVRNGSH 84 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + + VD VR++ EK+ A GG K+ + +A +++ AA NALLKTLE Sbjct: 85 PDVLEI---DAASNNSVDDVRDLREKVGLAAMRGGKKIYILDEAHMMSRAAFNALLKTLE 141 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHY 163 EPPA F LAT EPE+++ T+ SRC+ HY Sbjct: 142 EPPAHVIFILATTEPEKIIPTILSRCQ-HY 170 >UniRef50_A8W216 Dihydropteroate synthase n=2 Tax=Bacillus RepID=A8W216_9BACI Length = 330 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 23/287 (8%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L + + R HA L + G G + +++ LCQ + CG C C+ + +G H Sbjct: 19 LKRTIEKNRLAHAYLFEGSRGTGKQEIAKLVAKAFLCQVRESADPCGDCGDCRRVDSGNH 78 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + + P+ T+ V+ +R + ++ + G KV V DA L+T +A N+LLK LE Sbjct: 79 PDVHLIEPDG--TTIKVEQIRGLKKEFSMRGMESGRKVYLVQDADLMTASAGNSLLKFLE 136 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAP-PPEQYAVTWLSREVTMSQDALLAALR 192 EP E L T P+R+L T+ SR ++ P P+++ T ++ +V +DALL + R Sbjct: 137 EPDGEALAILMTTRPQRILKTILSRVQVLSFHPLAPDEFVKTLVNHDVK-ERDALLLS-R 194 Query: 193 LSAGSPGAALALFQGDNW--QARETLCQAL-------AYSVPS--GDWYSLLAALNHEQA 241 +++ + AL++ + D W +AR + Q + YS+ S DW Q Sbjct: 195 MTS-NLDEALSMTEED-WIAEARNKVIQLIDDLVTRPGYSLISLQDDWIPFFKEKTDVQL 252 Query: 242 PARLH--WLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRL 286 L W +L + + Q+ VD + + A LS RL Sbjct: 253 GIDLMTLWYRDVLRTKVDQME---QIVYVDQEDRLQKQAFSLSEERL 296 >UniRef50_Q5P0G2 DNA-directed DNA polymerase III, delta subunit n=3 Tax=Rhodocyclaceae RepID=Q5P0G2_AZOSE Length = 353 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 111/236 (47%), Gaps = 33/236 (13%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK-SCGHC 62 +PWL+ +++LVA + R HALL G+G L AL+ LLC P+ +C C Sbjct: 3 HPWLQETWQRLVALGE--RLPHALLFVGPAGLGKRDLADALAARLLCATPRPDGCACDRC 60 Query: 63 RGCQLMQAGTHPDYYTLAP-------------EKGKNTLG----------VDAVREVTEK 99 CQL ++G HPD + + P E G+ +G ++ +R++ + Sbjct: 61 TTCQLRRSGNHPDLFMIVPAADMEAGNGDESREGGERDIGSAKKKSTQIVIEQIRDLQQS 120 Query: 100 LNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRC 159 L+ G +V+ V A + ANALLK LEEPPA F L + P RLL T+RSRC Sbjct: 121 LSVTGHQSGRRVIVVDPAEAMNPYTANALLKLLEEPPAGCLFVLVSSAPRRLLPTIRSRC 180 Query: 160 RLHYLAPPPEQYAVTWLSREVTMSQDAL-------LAALRLSAGSPGAALALFQGD 208 + + P WL + + D L LAA RL+ GA LA F D Sbjct: 181 QQWSFSQPATDVVGQWLGTQEAPAADLLALTGGMPLAAQRLAGQGAGALLARFVRD 236 >UniRef50_B0TB70 DNA polymerase iii delta prime subunit, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TB70_HELMI Length = 340 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 2/160 (1%) Query: 20 AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTL 79 A R HA L G+G A ++ +LC + G +C C C+ Q G+HPD ++L Sbjct: 24 ANRVAHAYLFSGPQGVGKKTAARAFAQSVLCLERAGGDACASCPACRQFQGGSHPDLFSL 83 Query: 80 APEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAET 139 +PE TL ++ +R + +++ L +VV + A + +ANALLK LEEPP T Sbjct: 84 SPEG--TTLKIEQIRNLQKRIRYRPYLSSHQVVLIEQAETMQGPSANALLKILEEPPGPT 141 Query: 140 WFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE 179 F L T +L T+RSRC Y P P +L + Sbjct: 142 VFILITDRGHGILPTIRSRCLPVYFQPVPSGEIARFLKEK 181 >UniRef50_B0U3X0 DNA-directed DNA polymerase n=23 Tax=Xanthomonadaceae RepID=B0U3X0_XYLFM Length = 330 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 10/204 (4%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW + ++++VA+ AG H LL+ G+G A+ A + +L +G R Sbjct: 18 PWQQRAYDQMVAALDAGHLGHGLLLCGPEGLGQRAVALAFADAVL---GKGLTEVARQRC 74 Query: 65 CQLMQAGTHPDYY------TLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAA 118 QL+ AGTHPD T +K + + ++ +R+++EKL + G A+VV + A Sbjct: 75 RQLITAGTHPDLQLVSFIPTKTADKLRTEIVIEQIRDLSEKLVLTPQYGQAQVVIIDPAD 134 Query: 119 LLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR 178 + AA NALLKTLEEP + + +L + +P RL T+RSRC+ PP A+ WL Sbjct: 135 AINPAACNALLKTLEEPASGCYLWLISPQPARLPVTIRSRCQRLEFKLPPLHEALAWLVA 194 Query: 179 EVTMSQDALLAALRLSAGSPGAAL 202 + ++++ + AL + G PG A+ Sbjct: 195 Q-GITEEVAVEALDAARGHPGLAM 217 >UniRef50_D1B9W0 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9W0_THEAS Length = 580 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 5/153 (3%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP-QGHKSCGHCRGCQLMQA 70 E LV S ++GR HA L G G + L++ L C P + +SCG C C+ +Q Sbjct: 25 EALVGSLRSGRIPHAFLFSGPRGCGKTSAARLLAKRLNCASPAEDGESCGTCVNCEAIQR 84 Query: 71 GTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLK 130 G H D + G + G++ +R + +++ KV + + +LT+AA NALLK Sbjct: 85 GGHLDVVEI---DGASNRGIEEIRSLKDQVALAPFQAPNKVYIIDEVHMLTEAAFNALLK 141 Query: 131 TLEEPPAETWFFLATREPERLLATLRSRCRLHY 163 TLEEPP+ +F LAT EP+++ T+RSRC +H+ Sbjct: 142 TLEEPPSRVYFVLATTEPQKVPVTIRSRC-VHF 173 >UniRef50_C8W2Q8 DNA polymerase III, delta prime subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2Q8_DESAS Length = 358 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 3/196 (1%) Query: 20 AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTL 79 GR HA L G+G ALS LLC + +CG C C+ + G HPD + + Sbjct: 48 TGRVAHAYLFSGQHGVGKKTTALALSASLLCDFNRSGDACGKCTSCRQLVNGNHPDLHII 107 Query: 80 APEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAET 139 +P+ ++ ++ +R++ +K + ++ + A +T AAN LK LEEPP +T Sbjct: 108 SPDGA--SIKIEQIRDLQQKARYKSYQNKHQIFIIDQAEGMTREAANCFLKILEEPPEQT 165 Query: 140 WFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPG 199 F L + EPE LL T+ SRC+ + + L + ++Q+ A +++ GS G Sbjct: 166 VFILISAEPELLLPTVISRCQPMSFKDLGLEEISSLLIQLSGVNQEKAGLAAQMARGSIG 225 Query: 200 AALALFQGD-NWQARE 214 AL+ F D ++ RE Sbjct: 226 RALSYFNDDQQYKLRE 241 >UniRef50_A5G697 DNA polymerase III, delta prime subunit n=7 Tax=Geobacter RepID=A5G697_GEOUR Length = 320 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 134/309 (43%), Gaps = 16/309 (5%) Query: 17 SYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDY 76 S GR HA L + G+G A AL + C + +G CG C C+ + A HPD Sbjct: 19 SLATGRLAHAYLFEGTEGVGKKATALALIEAVFCGKEEG---CGACPSCRKIAALQHPDL 75 Query: 77 YTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPP 136 + + P+ + +D +R++ + L K + A AA NALLKTLEEPP Sbjct: 76 HLVEPDGA--FIKIDQIRDLQKDLAYRPFEAPKKACIIDGAERFNQAAGNALLKTLEEPP 133 Query: 137 AETWFFLATREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSA 195 L T + +L T+ SRC RLH+ P E A +L R + A +AA L+ Sbjct: 134 GNALIILVTAQSSGVLPTILSRCQRLHFQTLPEETIA-AYLGRNGIDGEAARIAA-SLAG 191 Query: 196 GSPGAALALFQGDNWQARETLCQ-----ALAYSVPSGDWYSLLAALNHEQAPARLHWLAT 250 GS AL + + R+ + +L P LAA + ++ L L + Sbjct: 192 GSMKKALEISKETTLSDRKQFLERLIGLSLREITPLFSAAEELAA-DKDKVMELLELLTS 250 Query: 251 LLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINREL 310 L D L G + N D+ ++ A LS + + +G V R L+ +N L Sbjct: 251 FLRDILLLKGGGEGIVNADLLPILEREAGRLSQTGIMERIGHVAAARHALLR--NVNARL 308 Query: 311 LITDLLLRI 319 + L +R+ Sbjct: 309 TLEVLFMRL 317 >UniRef50_UPI0001BC30A0 DNA polymerase III, delta prime subunit n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC30A0 Length = 329 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 3/222 (1%) Query: 13 KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT 72 +L+++ + +HA + G G + L A ++ LLC++ QG + CG C C+ ++G+ Sbjct: 16 QLISAVSMSKINHAYIFNGPDGSGKNMLAKAFAQALLCEK-QGPEGCGECHFCKQTESGS 74 Query: 73 HPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 +PD + K +N + VD +RE + + + G KV + +A LT A NALLKT Sbjct: 75 NPDLIYIRHSK-ENIISVDDIRESLVQDIQIKPYNGLYKVYIIDEAEKLTVQAQNALLKT 133 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAAL 191 +EEPP + T + L T+ SRC + L P + +L + ++ Sbjct: 134 IEEPPEYSVIIFLTNNADIFLQTILSRCIVFNLKPLRDDVITDYLIKTYKIADYEAKVCS 193 Query: 192 RLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLL 233 + G G A+ LF+ +++ + L ++ S + Y L+ Sbjct: 194 SFAQGILGKAIRLFESEDFNGVKEAAVRLVKNIYSYEIYDLI 235 >UniRef50_C5SNN8 DNA polymerase III, delta prime subunit n=2 Tax=Caulobacteraceae RepID=C5SNN8_9CAUL Length = 336 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 106/214 (49%), Gaps = 8/214 (3%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLC-QQPQGHKSCGHCR---GCQLMQAGTHPDY 76 GR HHA L+ G+G L Y +RYL+ Q+ +G G +L+ A +HPD Sbjct: 36 GRLHHAWLLCGPEGVGKATLAYRAARYLMGHQRDRGFGILGMSEEDPDARLIVAQSHPDL 95 Query: 77 YTLAPE----KGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTL 132 L E K + + VDAVREV E ++ +V V L +ANALLK L Sbjct: 96 LVLEREQKDGKTRKNITVDAVREVVEFFSKAPSRSAYRVCIVDAVDDLNINSANALLKIL 155 Query: 133 EEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALR 192 EEPP FL + P +LLAT+RSRCR +P ++ ++S +S + L + Sbjct: 156 EEPPERGLLFLISHSPGKLLATIRSRCRRLGFSPWDDEAVQRFISARADLSPEQLERLVV 215 Query: 193 LSAGSPGAALALFQGDNWQARETLCQALAYSVPS 226 ++ GSPG L L++ + E + L+ + P+ Sbjct: 216 MAKGSPGKGLRLWEEGALEMDELAARLLSDAQPA 249 >UniRef50_UPI00016A2E07 DNA polymerase III subunit delta'''' n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A2E07 Length = 215 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 98/215 (45%), Gaps = 33/215 (15%) Query: 4 YPWLRPDFEKLVASYQAGRGH--HALLIQALPGMGDDALIYALSRYLLCQQPQGH-KSCG 60 YPW D+ +L Q R HALL+ G+G L++ LC+ PQ + + CG Sbjct: 3 YPWQTDDWNRL----QQLRAQWPHALLLHGQAGIGKLQFAQHLAQGFLCETPQANGEPCG 58 Query: 61 HCRGCQLMQAGTHPDYYTLAPEK--------------------GKNT------LGVDAVR 94 C C G HPDY + PE GK T + ++ VR Sbjct: 59 ACAACTWFVQGNHPDYRIVLPEALAGEAPGAVDDARPADADDGGKKTRAPSKEIKIEQVR 118 Query: 95 EVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLAT 154 + + + GGA+VV + A L AA+NALLKTLEEPPA F L + +RLL T Sbjct: 119 ALLDFCGVGSHRGGARVVVLYPAEALNVAASNALLKTLEEPPAGVVFLLVSARIDRLLPT 178 Query: 155 LRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLA 189 + SRCR + P A WL+ + ALLA Sbjct: 179 IISRCRQWPMTVPAPDEAAAWLAAQGVADAPALLA 213 >UniRef50_A3UCJ6 DNA polymerase III, delta prime subunit n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UCJ6_9RHOB Length = 346 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 95/202 (47%), Gaps = 9/202 (4%) Query: 16 ASYQAGRGHHALLIQALPGMGDDALIYALSRYLL---CQQPQGHKSCGHCRGCQLMQAGT 72 A+ +GR HHA ++ G+G + Y L+R LL G S C+ ++A + Sbjct: 36 AAISSGRMHHAWMVSGPKGVGKASFAYRLARRLLGARATDEAGLASDPDDPVCRRLEALS 95 Query: 73 HPDY------YTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 HPD+ Y K K + V+ R E ++ A G +V V A L +AN Sbjct: 96 HPDFLLIRRPYNDKTGKLKGEIPVEEARRAPEFFSKSASGKGWRVCIVDSADELNVNSAN 155 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDA 186 ALLKTLEEPP L P RLL T+RSRCR L P + WL MS D Sbjct: 156 ALLKTLEEPPQRGLLILIVNTPGRLLPTIRSRCRRLILRAPSIEATTQWLMDRHQMSADE 215 Query: 187 LLAALRLSAGSPGAALALFQGD 208 A L+ G+PG ALAL + D Sbjct: 216 AQRAAMLAQGAPGRALALAETD 237 >UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcus oceani RepID=Q3J800_NITOC Length = 529 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 106/232 (45%), Gaps = 12/232 (5%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L GR HHA L G+G L L++ L C++ CG C+ CQ + G Sbjct: 28 LTNGLDKGRLHHAFLFTGTRGVGKTTLARILAKSLNCKEGVRSTPCGKCQNCQAIDGG-- 85 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 ++ L + GVD RE+ E ++ G KV + + + + ++ NALLKTLE Sbjct: 86 -NFVDLIEVDAASRTGVDDTRELLENVHYAPSRGHYKVYLIDEVHMFSTSSFNALLKTLE 144 Query: 134 EPPAETWFFLATREPERLLATLRSRC---RLHYLAPP--PEQYAVTWLSREVTMSQDALL 188 EPP F LAT EP++L T+ SRC L + P E + E+ AL Sbjct: 145 EPPPHIKFLLATTEPKKLPVTVLSRCLQFNLRRITPKAIAEHLNSILEAEEIPSESYALT 204 Query: 189 AALRLSAGSPGAALALF-QGDNWQARETL---CQALAYSVPSGDWYSLLAAL 236 R + GS AL+L Q N+ + + + + S+ GD + LL AL Sbjct: 205 LIARAAEGSVRDALSLLDQAINYGRGQVMVADVRTMLGSIEQGDLFILLDAL 256 >UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W8W3_ATOPD Length = 755 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 4/137 (2%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA L G G + L++ +LC + GH G C CQL+ AG HPD + + + Sbjct: 37 HAYLFCGPRGTGKTTMARLLAKAILCHEAPGHLPDGTCEDCQLIAAGQHPDVFEI--DAA 94 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAA-LLTDAAANALLKTLEEPPAETWFFL 143 NT GVD VRE +A + G V++ D +LT AA NALLKTLEEPP+ F + Sbjct: 95 SNT-GVDNVREEIISRASYAPVCGKGKVYIIDEVHMLTSAAFNALLKTLEEPPSHVTFIM 153 Query: 144 ATREPERLLATLRSRCR 160 T +P+++LAT+ SR + Sbjct: 154 CTTDPQKILATILSRVQ 170 >UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Tax=Thermosipho africanus TCF52B RepID=B7IDS2_THEAB Length = 480 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 8/198 (4%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 + S + G HA + G G + L++ L C+ G + C C CQ + G+ Sbjct: 26 FLNSLKNGEISHAYIFAGPRGTGKTTVARILAKSLNCENKNGVEPCNKCNTCQSIDNGSF 85 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + + G+D +R++ E + HA G KV + + +LT A NALLKTLE Sbjct: 86 MDVLEIDAASNR---GIDEIRKIRETVGYHAAQGNYKVYIIDEVHMLTKEAFNALLKTLE 142 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALL 188 EPP+ F LAT PE++ T+ SRC++ + + L + +SQ+AL Sbjct: 143 EPPSNVVFILATTNPEKIPQTIISRCQVIDFKNLTIEDIIKRLEFVCKKENINISQEALN 202 Query: 189 AALRLSAGSPGAALALFQ 206 + + G AL + + Sbjct: 203 EIAKRANGGMRDALTILE 220 >UniRef50_A1U0Y9 DNA polymerase III, delta prime subunit n=3 Tax=Marinobacter RepID=A1U0Y9_MARAV Length = 343 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 96/329 (29%), Positives = 137/329 (41%), Gaps = 23/329 (6%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK-----SC 59 PWL + + R HALL+ G+G A A++ LLC Q G +C Sbjct: 9 PWLGRAWSTVQQRLAQDRLPHALLVVGEQGVGKRAWAEAVAGLLLCDQQVGLDDGAPIAC 68 Query: 60 GHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAAL 119 G CR CQL+ A +HPD +PEK + + VD +R ++ ++ KV V A Sbjct: 69 GQCRQCQLIAANSHPDVRVYSPEKSR-MVKVDQIRALSTFAVASPQVAHRKVAIVDRADQ 127 Query: 120 LTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE 179 L AANALLKTLEEP + L +L T+RSRC+ + P + A WLS Sbjct: 128 LNINAANALLKTLEEPLPDVTLLLLQESGRPVLPTIRSRCQALTIPLPDAEDAGRWLSAR 187 Query: 180 VTM-------SQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVPSGD 228 V+ S D L +L L+ +P AL G+ +A E Q + + GD Sbjct: 188 VSELEESIRPSPDTLAKSLMLAGNAPRLALEYATGEFLAQRDEAFEAFRQFMKGQMTVGD 247 Query: 229 WYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQA 288 L + WL L R +V + + ++ LA P R Sbjct: 248 AARRFKTLGLDDT----LWLFESWAADLARCSAGGEVQDPEAADMLGYLARANPPWRAHQ 303 Query: 289 ILGDVCHIREQLMSVTGINRELLITDLLL 317 ++ V R + + EL T LLL Sbjct: 304 LMERVRESRS--AGIYNASPELEATQLLL 330 >UniRef50_C3X9N7 DNA polymerase III subunit delta n=2 Tax=Oxalobacter formigenes RepID=C3X9N7_OXAFO Length = 355 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 35/228 (15%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ--QPQGHKSCGH 61 YPW R ++E LV + HALL G G ++ + ++ LC+ QP G+ +CG Sbjct: 10 YPWHRKNWEYLVR--LESKLPHALLFYGPAGTGVESFAESFAKARLCENRQPDGN-ACGG 66 Query: 62 CRGCQLMQAGTHPDYYTLAPE-----KG----------------------KNTLGVDAVR 94 C+ C +HPD+ + PE KG +G++ +R Sbjct: 67 CQSCHWFDQNSHPDFRQILPETLEIAKGLDDPDKKTDDDSGASDKKTREPSKKIGIERIR 126 Query: 95 EVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLAT 154 + + +N GG +VV V A +T ++N+LLK LEEPPA T F L T + LL T Sbjct: 127 SLADFINISTHRGGLRVVSVYPAEAMTTESSNSLLKMLEEPPANTLFILTTNHLDALLPT 186 Query: 155 LRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAAL 202 + SRC P A+ WL + ++ LA G+P AL Sbjct: 187 ILSRCSKLAFPMPETSMAIGWLKEQGVDEAESWLAE---QGGAPVTAL 231 >UniRef50_A0LEK6 DNA polymerase III, delta prime subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LEK6_SYNFM Length = 335 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 84/315 (26%), Positives = 139/315 (44%), Gaps = 20/315 (6%) Query: 19 QAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYT 78 +AG HA+L + G+G + L++ + C +P+ +SC C C+ + G HPD + Sbjct: 21 RAGTLPHAVLFSGMAGVGKLRVARELAKLVNCLEPRDDESCDRCISCRKIDEGHHPDLFV 80 Query: 79 LAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAE 138 + E + +D +RE+ E++ G +VV + +A L D + NALLK LEEPP Sbjct: 81 IRSEG--TFIKLDRIRELRERVRFRPFEGRFRVVIIENAQHLHDESGNALLKVLEEPPRA 138 Query: 139 TWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSP 198 F L EP+ LL T+ SRC L P ++ L+ + + + RLS GS Sbjct: 139 NLFLLTAIEPQMLLPTIVSRCSHLRLQPLEDEVIAGELAASLKIPEAQARELTRLSGGSL 198 Query: 199 GAALALFQGDNWQARETLCQALAYSVPSGD---------WYSLLAALNHEQAPARLHWLA 249 A L + ++ + + + L S SG W L + +L W+ Sbjct: 199 DRAQWLAREEHLSHWKEIVENLRKSERSGTADVLAMAGRWAQQKEDLEQDLECVKL-WVR 257 Query: 250 TLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTG-INR 308 LL+ + G Q D P V +SP L + + E + + G N+ Sbjct: 258 DLLLSRV--IDGYRQAFEPDDPCAVC--GGEVSPDSLLTLYD---RVEESIGRLRGNANK 310 Query: 309 ELLITDLLLRIEHYL 323 +L++ + L I+ L Sbjct: 311 QLVMESICLNIKDVL 325 >UniRef50_B3E2K6 DNA polymerase III, delta prime subunit n=2 Tax=Desulfuromonadales RepID=B3E2K6_GEOLS Length = 331 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 2/214 (0%) Query: 11 FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP-QGHKSCGHCRGCQLMQ 69 + L S A R HA L + G G AL + L C++P G +CG+C C+ + Sbjct: 13 LDALKRSIAANRVAHAYLFEGPDGCGRRTTALALMQALFCKEPLDGGDACGNCSSCRKLA 72 Query: 70 AGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALL 129 +G HPD + L+P K + ++ +RE+ ++L+ K + A + + +ANALL Sbjct: 73 SGNHPDLHLLSPLPDKRDISIEQIRELQQQLSLRPFEAKRKACLIEPAERMNEKSANALL 132 Query: 130 KTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLA 189 KTLEEPP L + + + LL+T+RSRC+ H P + V L + M D Sbjct: 133 KTLEEPPGHAIIVLLSTQADLLLSTIRSRCQ-HLRFSPLDDGVVADLLIQQGMDPDKARE 191 Query: 190 ALRLSAGSPGAALALFQGDNWQARETLCQALAYS 223 L+ GS A L + + R+ L L+ + Sbjct: 192 LAPLAEGSMERASTLEEESDAVRRQELLTVLSKA 225 >UniRef50_B9CMB1 DNA polymerase III subunit gamma/tau n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CMB1_9ACTN Length = 723 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 4/141 (2%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA 80 G+ HA L G G + L++ LLC++ G G C CQL+ AG HPD + Sbjct: 33 GKVSHAYLFCGPRGTGKTTMARLLAKALLCRKAPGQLPDGTCEECQLIAAGNHPDVVEI- 91 Query: 81 PEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAET 139 + NT GVD VRE + + N G KV + + +LT AA NALLKTLEEPPA Sbjct: 92 -DAASNT-GVDNVREEIISRANYAPVRGKGKVYIIDEVHMLTTAAFNALLKTLEEPPAHV 149 Query: 140 WFFLATREPERLLATLRSRCR 160 F L T +P+++L T+ SR + Sbjct: 150 TFILCTTDPQKVLGTVLSRVQ 170 >UniRef50_Q5WLY0 DNA polymerase III delta' subunit HolB n=3 Tax=Bacillus RepID=Q5WLY0_BACSK Length = 332 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 7/207 (3%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 LVAS Q R HA L + G G + +++ C++ G + C C C ++ G H Sbjct: 21 LVASIQKNRLAHAYLFEGEAGSGKHEVALLMAKRFFCKEHNGAEPCHACSDCLRIEHGNH 80 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + +AP+ ++ + + + ++ AKV V+ +T +AAN+LLK LE Sbjct: 81 PDVHQVAPD--GQSIKKEQIEYLQKEFTYRGMESAAKVYIVSHVDKMTASAANSLLKFLE 138 Query: 134 EPPAETWFFLATREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSREVTMSQDALLAALR 192 EP +T L T +L T+RSR ++ +L P Q A ++ + +Q LAAL Sbjct: 139 EPQGQTLAILLTENGASILPTIRSRAQQMRFLPPSQTQIASKLVAEGIEENQALFLAAL- 197 Query: 193 LSAGSPGAALALFQGD-NWQARETLCQ 218 G+ A AL +GD ++QAR + Q Sbjct: 198 --TGNKAYAKALAEGDWSFQARTVVLQ 222 >UniRef50_A5WF95 DNA polymerase III, delta prime subunit n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WF95_PSYWF Length = 374 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 52/259 (20%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC---QQPQGHK-SCG 60 PW + ++ L+A Y+ R H LL + G+G A ++ +LLC +QP + +CG Sbjct: 14 PWQQTAWDNLIARYE--RLPHGLLFAGMQGIGKRAFVWRFVAWLLCDNREQPSSQQGACG 71 Query: 61 HCRGCQLMQAGTHPDYYTL--------------APEKGKN-----------------TLG 89 C+ CQ + +GTHPD L A + GK+ ++ Sbjct: 72 QCQSCQWLASGTHPDLQVLPISSLPSLEVEAATATKGGKSNTKKASENEAAKASVKLSIK 131 Query: 90 VDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPE 149 +D +RE+ +++ + G +V + A +T AAANALLKTLEEP L + P Sbjct: 132 IDDIRELQPFISQGS--SGRRVCVIDYADKMTVAAANALLKTLEEPREGIHLLLISDMPT 189 Query: 150 RLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS-------------QDALLAALRLSAG 196 +LL T+RSR + + P + V +L V+ + + AL+LS G Sbjct: 190 KLLPTIRSRVQQVAMDPMAHEQVVAYLENHVSQHTQNPAQSDNAAPLSEQVAQALKLSNG 249 Query: 197 SPGAALALFQGDNWQARET 215 +P AAL + +Q R T Sbjct: 250 APLAALEMLSSAWYQQRGT 268 >UniRef50_A6LMU3 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LMU3_THEM4 Length = 460 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 8/198 (4%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 V S + HA + G G + L++ L C+ PQ + C C C + G Sbjct: 26 FVNSLKNKEISHAYIFAGPRGTGKTTVARILAKSLNCENPQEIEPCNMCNACISIDKGNF 85 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D L + G+D +R++ E +N H G KV + +A +LT A NALLKTLE Sbjct: 86 MDVLELDAASNR---GIDEIRKIRETVNYHTAQGKYKVYIIDEAHMLTKEAFNALLKTLE 142 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALL 188 EPP+ F LAT PE++ T+ SRC++ + + L + + +S +A++ Sbjct: 143 EPPSNVVFILATTNPEKIPQTIISRCQVIDFKNISNKDIIKRLEFVCENEGIKISHEAIV 202 Query: 189 AALRLSAGSPGAALALFQ 206 + + G AL + + Sbjct: 203 EISKRANGGLRDALTILE 220 >UniRef50_C2D9N9 DNA polymerase III gamma and tau subunits n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9N9_9ACTN Length = 742 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 76/136 (55%), Gaps = 6/136 (4%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA L G G + ++ LLC PQ CG C C+ + G HPD + L Sbjct: 37 HAYLFCGPRGTGKTTMARLFAKALLCTSPQNGLPCGVCETCKNIAQGIHPDVFEL---DA 93 Query: 85 KNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAA-LLTDAAANALLKTLEEPPAETWFF 142 + GVD VRE + +++N +A L GA +++ D +LT +A NALLKTLEEPP+ F Sbjct: 94 ASRTGVDNVREEIIDRVN-YAPLKGAYKIYIIDEVHMLTASAFNALLKTLEEPPSHVVFI 152 Query: 143 LATREPERLLATLRSR 158 L T EP ++LAT+ SR Sbjct: 153 LCTTEPHKILATILSR 168 >UniRef50_D1CBV2 DNA polymerase III, delta prime subunit n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBV2_THET1 Length = 345 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 97/226 (42%), Gaps = 18/226 (7%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L A+ R + L P +G L + LLC CG C C+ + G+H Sbjct: 19 LSAAKAKNRASGSWLFTGPPSVGKSTLARWFAALLLCSDETSDYPCGQCIHCRKIYHGSH 78 Query: 74 PDYYTL-----APEKGKNT--LGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 PD T+ A + GK + +G+D++R + E++ KV + DA+ +T+ AAN Sbjct: 79 PDVETISLALQAEQSGKPSREIGIDSIRNIIERIYLRPFEANRKVYLIEDASTMTEEAAN 138 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDA 186 A LKTLEEPP L + L T+RSRC L P P +L + Q+ Sbjct: 139 AFLKTLEEPPDFVTIVLIAIDDYSLPETIRSRCYRVNLQPVPHSEITRYLVNSLGFEQEE 198 Query: 187 LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSL 232 LS G PG W R T +AL V + DW L Sbjct: 199 ANMIATLSNGRPG----------WAIRATHDRALVAQV-NDDWKYL 233 >UniRef50_C4GC81 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GC81_9FIRM Length = 330 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 83/309 (26%), Positives = 133/309 (43%), Gaps = 12/309 (3%) Query: 19 QAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYT 78 Q + HA +I G G L A ++ LLC++ +G +CGHC C+ + PD Sbjct: 21 QNQKVSHAYIISGEEGSGKRMLAEAFAQTLLCEE-KGADACGHCHHCRQTMSHNQPDIIY 79 Query: 79 LAPEKGKNTLGVDAVR-EVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPA 137 L EK T+ VD +R ++ + KV V +A + + A NALLKT+EEPP+ Sbjct: 80 LTHEKPA-TISVDDIRSQINSDIVIRPYNSDYKVYIVDEAEKMNEQAQNALLKTIEEPPS 138 Query: 138 ETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGS 197 L T + L T+RSRC L P P+ L + + ++ + G+ Sbjct: 139 YAVILLLTTNAQAFLPTIRSRCILLETKPVPDALVRGELMKRYEIPDYQADMSVAFAQGN 198 Query: 198 PGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPAR-----LHWLATLL 252 G A+AL Q + R+ + +L + + +A + +A L L Sbjct: 199 MGKAIALAQSQEFADRKEMVLSLIRHISEMTYADRIAWIREMEAKKEPLTDYLDLLMVFY 258 Query: 253 MDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINREL 310 D L K A ++ D V LA+ LS L+ I V R + +N +L Sbjct: 259 RDVLLYKATGQADRLIFADQVYQVKRLADGLSYRHLEEIFEGVESCRRK--DAANVNTDL 316 Query: 311 LITDLLLRI 319 ++ L+ R+ Sbjct: 317 ILQQLMERM 325 >UniRef50_C7RR77 DNA polymerase III, delta prime subunit n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RR77_9PROT Length = 348 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 93/202 (46%), Gaps = 25/202 (12%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQ--PQGHKSCGHCRGCQLMQAGTHPDYYTLAPE 82 HALLI G+G L + LLC+ P G +CG C C + G HPD L P+ Sbjct: 23 HALLITGQRGIGKFDLARRFAESLLCENVTPAG-SACGSCLACGWLAQGNHPDLRLLQPD 81 Query: 83 --------------------KGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD 122 K + +D VR + L+ G +VV ++ A + Sbjct: 82 ALAENESSEAVEGEGGGGRKKASQQITIDQVRGLDAFLHLGTHRHGVRVVLLSPAEAMNR 141 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM 182 A ANALLK+LEEP A T F L EP RLL T+RSRC+ + P AV WL + Sbjct: 142 ATANALLKSLEEPIANTLFILVASEPHRLLPTIRSRCQSVPVRRPSRHLAVQWLGQAGV- 200 Query: 183 SQDALLAALRLSAGSPGAALAL 204 DA+ L L+ GSP A+ L Sbjct: 201 -NDAIDDWLALAGGSPLLAVEL 221 >UniRef50_UPI0000E8800C DNA polymerase III subunit delta n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E8800C Length = 318 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 13/226 (5%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 MR YPW + +E L + R HAL+I A D L LLCQ +CG Sbjct: 1 MRQYPWYQEQWETLFHDLE--RFPHALIIHAQDNAVCDDFAQNLCHALLCQNRLADDACG 58 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNT---LGVDAVREVTE--KLNEHARLGGAKVVWVT 115 C C + +HPD++++ E + T + V +R + +L H + G K+ ++ Sbjct: 59 ACDNCLWVNNHSHPDFFSVDEEGNETTDKLIPVKVIRSLKNFFELTSH-QSHGKKIAYIA 117 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 A + ++NALLK +EEPP + L+T + + ++ T++SR RL +L P ++ + + Sbjct: 118 RAHRMNKESSNALLKIVEEPPNDCLIILSTSQLDAIIPTVKSRSRLVHLHQPVQEDGLAY 177 Query: 176 LSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALA 221 L T++ D + L SP AA+ + D + +++ +AL+ Sbjct: 178 LH---TLNLDMDASTLAFFGNSPVAAIN--ERDTFAHAKSIVRALS 218 >UniRef50_B9L1A1 DNA polymerase III tau and gamma subunits n=2 Tax=Thermomicrobia (class) RepID=B9L1A1_THERP Length = 350 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 80/158 (50%), Gaps = 3/158 (1%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L + ++G+ HHA L+ G+G L + ++ LLC+ + CG CR CQ + H Sbjct: 28 LARAIESGQVHHAYLLAGPAGIGRTTLAFVFAQALLCEGAAEQRPCGTCRSCQRIARRVH 87 Query: 74 PDYYTLAPEKGK---NTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLK 130 PD + + G + +D VRE+ L+ G +V V DA L+ AA+ALLK Sbjct: 88 PDVTRIGLDTGAEEAKQVSIDQVRELRASLSLRPLEGAWRVAIVDDAERLSREAADALLK 147 Query: 131 TLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPP 168 TLEEPP L + + L T+RSRC+ L P P Sbjct: 148 TLEEPPPYAVLVLVAEDAQALPETIRSRCQTIVLQPLP 185 >UniRef50_Q6MP27 DNA polymerase III delta' subunit n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MP27_BDEBA Length = 314 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 85/285 (29%), Positives = 127/285 (44%), Gaps = 22/285 (7%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 +K+V S++ G+ L G+G L++ LLC P + CG C C + G Sbjct: 16 KKMVESFENGKPGQTFLFVGPGGIGKKLTAMGLAQALLC--PSSPRGCGKCPSCFRISQG 73 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 +H +AP G N + ++ +EV E L+ + L G +V+ + A L AAN+LLKT Sbjct: 74 SHEGLKLIAP-NGAN-IKMEQAKEVLEFLSLKS-LTGNRVIVIDQAQTLNPQAANSLLKT 130 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAAL 191 LEEPP T+FFL +L T+RSR R+ P ++ L + V A AL Sbjct: 131 LEEPPEGTFFFLIAPSVAGILPTIRSRSRIVQFRPLTQED----LGKRV----KAPAWAL 182 Query: 192 RLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAAL------NHEQAPARL 245 + + GS L G + RE + L + D+ LL L + Q + Sbjct: 183 KAAGGSFEKLAQLQDGPEQEVREKAVELLTLFIQDADF--LLNELWRNEFKDRAQGQRMI 240 Query: 246 HWLATLLMDALKRHHGA-AQVTNVDVPGLVAELANHLSPSRLQAI 289 + L DA+ GA Q+ N+D L+ LA P L I Sbjct: 241 SYWIGFLKDAICLQEGAKTQIVNLDQAPLIKVLAELERPRILNLI 285 >UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 Tax=Xanthomonadaceae RepID=B0RYK4_XANCB Length = 752 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 97/213 (45%), Gaps = 15/213 (7%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L + +GR HHA L G+G + ++ L C+ CG C C + AG + Sbjct: 127 LSNALDSGRVHHAFLFTGTRGVGKTTIARIFAKSLNCETGTSADPCGTCPACLDIDAGRY 186 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + + NT GVD VREV E G KV + + +L+ AA NALLKTLE Sbjct: 187 IDLLEI--DAASNT-GVDDVREVIENAQYMPSRGKFKVYLIDEVHMLSKAAFNALLKTLE 243 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRL 193 EPP F LAT +P++L T+ SRC Q+ + L + Q + A Sbjct: 244 EPPEHVKFLLATTDPQKLPVTVLSRCL---------QFNLKRLDEDQIQGQMTRILAAEE 294 Query: 194 SAGSPGAALALFQGDNWQARETLC---QALAYS 223 P A + L + + R+ L QA+AY+ Sbjct: 295 IESDPSAIVQLSKAADGSLRDGLSLLDQAIAYA 327 >UniRef50_C0GUE6 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUE6_9DELT Length = 561 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 82/157 (52%), Gaps = 6/157 (3%) Query: 10 DFEKLVASYQAG--RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQL 67 DF K + S AG R HA L G+G L LS+ + C + C C C+ Sbjct: 22 DFIKSILSRAAGQDRPSHAYLFSGTRGVGKTTLARILSKAINCYNGPAPEPCNQCSSCEQ 81 Query: 68 MQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANA 127 + G PD + + + GVD VR++ E + G KVV + +A +L+ +A NA Sbjct: 82 ITRGASPDVWEI---DAASHTGVDNVRKLREDVAYSPMSGRYKVVIIDEAHMLSTSAFNA 138 Query: 128 LLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYL 164 LLKTLEEPPA F +AT PE+ AT+ SRC+ HY+ Sbjct: 139 LLKTLEEPPAHCVFIMATTAPEKFPATVISRCQ-HYV 174 >UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DT09_EIKCO Length = 754 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 10/165 (6%) Query: 2 RWYPWLRPDF---EKLVASYQ----AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D E +V + Q GR HHA L+ G+G + L++ L C+ P Sbjct: 9 KWRPKTFADLVGQEHVVKALQNALGKGRLHHAYLLTGTRGVGKTTIARILAKSLNCETPH 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C+ + AG D + + NT G+D +REV E G KV + Sbjct: 69 EGEPCGQCQSCRDIDAGRFVDLLEI--DAASNT-GIDNIREVLENAQYAPTAGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRC 159 + +L+ +A NA+LKTLEEPP F LAT +P ++ T+ SRC Sbjct: 126 DEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRC 170 >UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKL9_9BACT Length = 534 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 94/196 (47%), Gaps = 8/196 (4%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L S + GR HA L G+G + L++ + C +P G C C C + +GT Sbjct: 28 LKNSIEMGRVAHAYLFTGPRGVGKTSAARILAKAVNCLEPVGSNPCNKCENCTEITSGTS 87 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + G + G+D +RE+ E + KV + + +LT+ A NALLKTLE Sbjct: 88 MDVVEI---DGASNRGIDEIRELREAVRFLPVKCKFKVYIIDEVHMLTEHAFNALLKTLE 144 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALL 188 EPP F LAT +P+RL AT+ SRC+ + P + L + + +DAL Sbjct: 145 EPPDYVMFILATTDPQRLPATIISRCQKYDFNKIPFEIMYDSLAGAMDTEGIEYDKDALN 204 Query: 189 AALRLSAGSPGAALAL 204 +R S G +L+L Sbjct: 205 LVVRNSDGCMRDSLSL 220 >UniRef50_C0QI37 HolB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI37_DESAH Length = 345 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 79/309 (25%), Positives = 138/309 (44%), Gaps = 16/309 (5%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK--SCGHCRGCQLMQ 69 + LVA + +ALL P +G A +R L CQ + + +C CR C+ + Sbjct: 21 QDLVALLATLKIPNALLFVGNPDLGKVETALAFARALNCQGEKRNDGLACDQCRSCKKIL 80 Query: 70 AGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALL 129 + HPD +AP K + + + +RE+ ++ ++V + A + A+NALL Sbjct: 81 SSMHPDIICVAPVKER--IKISQIREIYGQIKAKPHEAKFRMVLIQGAEAMNPEASNALL 138 Query: 130 KTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLA 189 K LEEPP T+F L T + LL T+ SRCR +P + L R+ + Sbjct: 139 KILEEPPERTFFILTTERTDGLLPTILSRCRQVTFSPMDQGKIEQILVRDHGIDTTTAGI 198 Query: 190 ALRLSAGSPGAAL---ALFQGD---NW-QARETLCQALAYSVPSGD-WYSLLAALNHEQA 241 A S GS AL + + D +W + R + A++ + + +LL A Q Sbjct: 199 AASWSQGSLQKALKFTGIVKSDDTTDWPERRRWMITAISTLIRGANPGVALLLAEKINQN 258 Query: 242 P----ARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIR 297 P L L + D + + ++ N D L+ E + +S R+ + + ++ H+ Sbjct: 259 PELLGGTLAILESFFRDMVVFKYNTEKIINSDFQTLLTETDSGISTQRVLSWITELHHVE 318 Query: 298 EQLMSVTGI 306 +++ + GI Sbjct: 319 KKIKANAGI 327 >UniRef50_Q1NUY3 DNA-directed DNA polymerase n=5 Tax=Deltaproteobacteria RepID=Q1NUY3_9DELT Length = 706 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 8 RPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGHCRGCQ 66 RP L + + R HA+L + G+G L +++ L CQ+P+ + C C+ CQ Sbjct: 22 RPVVRTLQNALRLQRVAHAMLFAGVRGVGKTTLARLMAKALNCQEPEPASRPCNQCKSCQ 81 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + AG D + + G + G+ +RE+ E + K+V + + +LT A N Sbjct: 82 EINAGAAVDLHEI---DGASNRGIQEIRELKENIRFLPVSASYKIVIIDEVHMLTTEAFN 138 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR-----EVT 181 ALLKTLEEPPA +F AT E ++ T+ SRC+ + L + + + EVT Sbjct: 139 ALLKTLEEPPAHVYFMFATTELHKIPITILSRCQRYELTRVAYDELLAFFRQVAAREEVT 198 Query: 182 MSQDALLAALRLSAGSPGAALALF 205 +S+ AL R + GS L+L Sbjct: 199 ISEAALAMISREADGSVRDGLSLL 222 >UniRef50_C6NVZ6 DNA polymerase III delta prime subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVZ6_9GAMM Length = 327 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 87/292 (29%), Positives = 129/292 (44%), Gaps = 21/292 (7%) Query: 11 FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG-HKSCGHCRGCQLMQ 69 + +L+ AGR +LL Q P ++ LC +P H +CG CR C L+ Sbjct: 14 YAQLLQQMFAGRLPQSLLAQGHPDSFLPQILEDFEAAALCLEPGADHAACGQCRSCLLLT 73 Query: 70 AGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALL 129 HPDY LAP + ++ +G+DAVR+ E L +LG + + + A L+ AAANALL Sbjct: 74 HAEHPDYRRLAPLEDRD-IGIDAVRDALEFLAYRPQLGARRWLRIDSAERLSVAAANALL 132 Query: 130 KTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE---------- 179 K LEEP L++ RLL T+RSRC P WL + Sbjct: 133 KGLEEPAPGAHLLLSSAASARLLPTIRSRCLRLPAMPKDPAAGRAWLVEQGVTAEEAAQL 192 Query: 180 VTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNH- 238 + D LL A+RL + G A E L + L + + + L+ + Sbjct: 193 IQFCSDRLLLAMRLHTQG-------WLGQRHIALEKLLE-LRHRPQANALFRLVDHWSKS 244 Query: 239 EQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAIL 290 EQ P + ++ D L H G ++ NVD + + A H + S + A L Sbjct: 245 EQLPFFRELMLSVYGDMLSLHLGLDKIRNVDYIQALRDAAAHWAVSHIWAEL 296 >UniRef50_D2BNT0 DNA polymerase III, delta prime subunit n=4 Tax=Lactococcus lactis RepID=D2BNT0_LACLK Length = 286 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 12/203 (5%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 P L F ++ Q G+ HA L G G L LS+ L C+ P+ CGHCR Sbjct: 8 PQLYKQFSTIL---QHGKLSHAYLFSG--GFGSFELAIWLSQALFCENPENSLPCGHCRS 62 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C+L+ D + + P+ T+ +RE+T+ NE G +V+ + +A + A Sbjct: 63 CRLVAQQEFTDLHIVEPDG--QTIKTAQIRELTQVFNESGYEGKQQVILIKEAEKMHPNA 120 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE-VTMS 183 ANALLK++EEP E FL T +L T++SR ++ P QY +L + + + Sbjct: 121 ANALLKSIEEPETEIVVFLLTDNENMILQTIKSRTQIINF-PKNVQYLQDFLEKNGILKT 179 Query: 184 QDALLAALRLSAGSPGAALALFQ 206 Q LLA + S AL L Q Sbjct: 180 QAELLAEI---CNSTDKALELAQ 199 >UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y576_9FIRM Length = 613 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 22/219 (10%) Query: 4 YPWLRPD-FEKLVA----------SYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ 52 Y RP FE++V + + + HA L G G + L++ + C+ Sbjct: 7 YRTYRPSSFEEVVGQQHIVTTLKNAVKQNKIAHAYLFCGPRGTGKTTIAKLLAKAVNCED 66 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 Q + C CR C +Q G HPD + + GVD VRE+ EK+ ++A L G V Sbjct: 67 -QQNAPCNQCRSCLAIQQGNHPDIVEI---DAASNNGVDEVRELIEKV-KYAPLEGRYKV 121 Query: 113 WVTDAA-LLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQY 171 ++ D +++ A NALLKTLEEPP+ F LAT EP+++L T+ SRC+ + + + Sbjct: 122 YIIDEVHMMSSGAFNALLKTLEEPPSHVIFILATTEPQKVLPTIISRCQRYDFSKVGQNE 181 Query: 172 AVTWL-----SREVTMSQDALLAALRLSAGSPGAALALF 205 +T + + +AL +L+ G AL++ Sbjct: 182 IITRVRCVLEQEHIECEDEALRLVAQLADGGMRDALSIM 220 >UniRef50_A1HPS4 DNA polymerase III, delta prime subunit n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPS4_9FIRM Length = 338 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 111/227 (48%), Gaps = 13/227 (5%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA 80 GR HALL G+G + A + LLCQ+ CG C C+ HP + Sbjct: 23 GRLPHALLFAGPEGVGKTLVAKAFAAALLCQEAAA--PCGRCLICRQAAEFAHPALQVIV 80 Query: 81 PEKGKNTLGVDAVREVTEKLNEHARLGGA--KVVWVTDAALLTDAAANALLKTLEEPPAE 138 P NT+ +D +R++ +E A GG ++ + +T AAN+LLK LEEPP Sbjct: 81 P--AGNTIKIDQIRQLQ---HEAALAGGDEWRLCIIEQVERMTAQAANSLLKLLEEPPPR 135 Query: 139 TWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSP 198 F L T P +L+T+RSRC++ AP P + LSR + A +AA RLS G Sbjct: 136 LIFILLTALPHAVLSTIRSRCQVLRFAPLPPEVLAAALSRRGYGEEAARVAA-RLSGGRM 194 Query: 199 GAALALFQGDNWQARETLCQALAYSVPSGDWYSL--LAALNHEQAPA 243 G ALAL R+ LA ++P+ + ++ L A+ + APA Sbjct: 195 GTALALLTPGGMALRDQAAAILA-NLPAANMETVWSLVAMLDKLAPA 240 >UniRef50_B1I166 DNA polymerase III, delta prime subunit n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I166_DESAP Length = 338 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 95/185 (51%), Gaps = 5/185 (2%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA L G+G +L AL++ L+C + + SCG C C++ AG+HPD L + Sbjct: 26 HAYLFHGPAGVGKKSLARALAQALVCNTAE-NNSCGLCPACRMFLAGSHPDLRVL--DGA 82 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 + ++G+ VRE+ + L + G + V +A LT AANALLKTLEEPP F L Sbjct: 83 EKSIGIAQVRELQQALV-YRPYGARHLCLVQEAEGLTAEAANALLKTLEEPPGPVLFILT 141 Query: 145 TREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALAL 204 + PERL T+ SRC L P + +T + D + A RL+ GS G A L Sbjct: 142 SARPERLPPTVVSRC-LKIPFRPLTRDEITSGLETMGFKGDMVPLAARLAGGSLGRAAEL 200 Query: 205 FQGDN 209 G + Sbjct: 201 AAGGD 205 >UniRef50_B0K122 DNA polymerase III, delta prime subunit n=10 Tax=Thermoanaerobacteraceae RepID=B0K122_THEPX Length = 324 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 74/304 (24%), Positives = 128/304 (42%), Gaps = 13/304 (4%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA 80 + +A L G+G + + + C+ + K C C C + HPD + + Sbjct: 21 NKISNAYLFVGEEGLGKRFMAEYFAMMINCK-GETAKPCFKCSSCLKVMDKNHPDVFFIK 79 Query: 81 PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETW 140 PE+ N++ VD +R +T ++N K+ + A +T AA NA LKTLEEPP Sbjct: 80 PEE--NSIKVDTIRYITNEINIRPYEANKKIFIIDQADKMTAAAQNAFLKTLEEPPLYGL 137 Query: 141 FFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGA 200 F L + + LL T+ SRC + +L E +S+ ++ G+ Sbjct: 138 FILIASQQQELLPTIVSRCNIVRFNKENRNTIKNYLMFEHDISEKEAEVLAHIADGNFAQ 197 Query: 201 ALALFQGD--NWQARETLCQALAYSVPSGDWYSLLAAL---NHEQAPARLHWLATLLMDA 255 A L + N++ RET+ + G N + L L + + D Sbjct: 198 ANKLTNNEYLNFR-RETIQEIEKILTIKGFEVIEEFEFFDKNKDNIEEILKILLSYMRDL 256 Query: 256 L--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLIT 313 L K A+ + N+D + E+ + L+ ++L I+ + Q+ S IN +L + Sbjct: 257 LVFKATKDASFIKNIDFLNRIQEMESRLTINKLNNIINRIEQFNSQINS--NINYQLAVE 314 Query: 314 DLLL 317 +L L Sbjct: 315 NLFL 318 >UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Coriobacteriaceae RepID=C7MLT3_CRYCD Length = 900 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 116/238 (48%), Gaps = 13/238 (5%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA L G G + L++ LLC++ + G CR CQ + G HPD Y L Sbjct: 38 HAYLFCGPRGTGKTTMARLLAKALLCEKGPTSEPDGSCRECQEIAEGVHPDVYEL---DA 94 Query: 85 KNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFL 143 + GV+ VRE + ++N G AK+ + + +L+ AA NALLKTLEEPPA F L Sbjct: 95 ASRTGVENVREEIIGRVNFAPTRGKAKIYIIDEVHMLSIAAFNALLKTLEEPPAHVVFIL 154 Query: 144 ATREPERLLATLRSRCR---LHYLAPPP--EQYAVTWLSREVTMSQDAL-LAALRLSAGS 197 T +P+++ T+ SRC+ H L+ + ++ V +AL L A R G Sbjct: 155 CTTDPQKVPETIHSRCQRFDFHRLSNEEIVSRLGAVCVAENVEFEGEALDLIAHRADGGM 214 Query: 198 PGAALALFQGDNW-QARETLCQA--LAYSVPSGDWYSLLAALNHEQAPARLHWLATLL 252 A AL Q + + + T+ A L S+ S D ++AA+ A A W+A+ + Sbjct: 215 RNALTALEQLIAFGEGKVTVAGAEDLLGSLDSSDLAEIMAAVGVRDAAACFSWVASYV 272 >UniRef50_Q0BT78 DNA polymerase III, delta' subunit n=4 Tax=Acetobacteraceae RepID=Q0BT78_GRABC Length = 342 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 104/217 (47%), Gaps = 23/217 (10%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG--------- 64 L +S ++GR HHA L+ G+G L Y +R+LL P+G S + Sbjct: 22 LASSVRSGRLHHAWLLTGPAGIGKATLAYRFARWLLAGAPEGGSSQHEKKADSPLWLSPE 81 Query: 65 ---CQLMQAGTHPDYYTLAP------EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + + A TH D ++ ++ + + VD VRE+ L+ GG +VV V Sbjct: 82 HPVFRRVAADTHADLLSIEAGWDERRKRQRTEIVVDDVREIASFLHLTPAEGGWRVVIVD 141 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRC---RLHYLAPPPEQYA 172 A L AANALLK LEEPP L+ P RLL T+RSRC RL L P Q Sbjct: 142 GADTLNRHAANALLKVLEEPPPRAILLLSCSSPGRLLPTIRSRCRMLRLQALEAAPMQDV 201 Query: 173 VTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDN 209 + L ++ ++ LLA L+ G+PG AL L + D Sbjct: 202 LATLLPDLAAAERDLLAG--LAEGAPGRALQLAKEDG 236 >UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5D8_LARHH Length = 769 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 3/138 (2%) Query: 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 R HHA L+ G+G + L++ L C++ G + CG C C+ + AG D + Sbjct: 36 RLHHAYLLTGTRGVGKTTIARILAKSLNCERGVGAEPCGECAACRQIDAGRFVDLLEI-- 93 Query: 82 EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWF 141 + NT G+D +REV E G KV + + +L+ +A NA+LKTLEEPPA F Sbjct: 94 DAASNT-GIDNIREVIENAQYAPTAGRYKVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKF 152 Query: 142 FLATREPERLLATLRSRC 159 LAT +P+++ T+ SRC Sbjct: 153 ILATTDPQKVPVTVLSRC 170 >UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG9_9FIRM Length = 587 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 9/189 (4%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA 80 R HA L G G ++ ++ L C Q CG C C++ G+HPD + Sbjct: 35 NRIAHAYLFCGPRGTGKTSIAKIFAKTLNCTNSQD-APCGVCENCKMAANGSHPDIIEID 93 Query: 81 PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETW 140 GVD VR + +K+ G K+ + + ++T A NALLKT+EEPPA Sbjct: 94 AASNN---GVDEVRNLIDKVKYAPMQGKYKIYIIDEVHMMTSGAFNALLKTIEEPPAHVI 150 Query: 141 FFLATREPERLLATLRSRCR---LHYLAPPPEQYAVTWLSRE--VTMSQDALLAALRLSA 195 F AT EP ++L T+ SRC+ + ++ +Y ++ + + + + QD L +L+ Sbjct: 151 FIFATTEPNKVLPTIISRCQRFDFNKVSVNDIKYRLSVVCKNEGIEIDQDGLTLIAQLAD 210 Query: 196 GSPGAALAL 204 G AL++ Sbjct: 211 GGMRDALSI 219 >UniRef50_C6NZM0 DNA polymerase III, delta prime subunit n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZM0_9PROT Length = 335 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 18/192 (9%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH-KSCGHC 62 YPW ++ L R HA+L++ G+G L ++ LLC++P +C C Sbjct: 5 YPWQSESWQALQGLR--NRLPHAVLLKGAQGIGKLDLAMNFAQSLLCEKPNADGTACHTC 62 Query: 63 RGCQLMQAGTHPDYYTLAPE---------------KGKNTLGVDAVREVTEKLNEHARLG 107 C + HPD+ + P+ K + VD +R ++ N A G Sbjct: 63 NSCHWFEQENHPDFRLVQPDALSSADEGDEKQGGKKPSREISVDQIRNLSNFANLSAHCG 122 Query: 108 GAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPP 167 G +VV + A + + AAN+LLKTLEEP F L + +P++LL T+ SRC ++ P Sbjct: 123 GYRVVLIHPAESMNNNAANSLLKTLEEPTDNLLFLLISHKPQQLLPTILSRCLGFTVSTP 182 Query: 168 PEQYAVTWLSRE 179 + WL ++ Sbjct: 183 TRELGTAWLEQQ 194 >UniRef50_D0LEI8 DNA polymerase III, delta prime subunit n=3 Tax=Actinomycetales RepID=D0LEI8_GORB4 Length = 431 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 5/146 (3%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGHCRGCQLMQAGTHPDYYTLAPEK 83 H+ L PG G + L CQ CG CR C + AGTH D ++AP+ Sbjct: 64 HSWLFTGPPGSGRSVAATCFAAALQCQADDPADIGCGQCRACVTVMAGTHADVRSIAPDG 123 Query: 84 GKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFL 143 TL V ++RE+ + + G ++V V DA LT+ AANALLK +EEPP+ T F L Sbjct: 124 --LTLSVKSMREIVQTASRRPGTGRWQIVIVEDADRLTEQAANALLKVVEEPPSRTVFLL 181 Query: 144 A--TREPERLLATLRSRCRLHYLAPP 167 + +P+ + TLRSRCR L P Sbjct: 182 CAPSVDPDDISVTLRSRCRHVALTSP 207 >UniRef50_B1C8Q2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8Q2_9FIRM Length = 645 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 27/235 (11%) Query: 4 YPWLRP-DFEKLVAS----------YQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ 52 Y RP +FE+++ + HA L + G G + ++ + C Sbjct: 7 YREFRPKNFEEIIGQDNIVNILKNQIKNDSISHAYLFSGIRGTGKTSTAKVFAKSICCLN 66 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 + ++C C C + G D + + G+D +R++ EK+N G KV Sbjct: 67 NKEGEACNECASCNDINIGDGADIVEIDAASNR---GIDEIRDLKEKVNYMPNFGRYKVY 123 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +LT A NALLKTLEEPP+ F AT EP ++L T+ SRC+ + Sbjct: 124 IIDEVHMLTTEAFNALLKTLEEPPSHIVFIFATTEPNKILPTILSRCQRFDFNRIDSEVV 183 Query: 173 VTWLS-----REVTMSQDAL-LAALRLSAGSPGAALALFQ------GDNWQARET 215 V L+ +E+ ++AL L AL + G+ AL+L DN +ET Sbjct: 184 VNHLASILDKKEIEYEKEALELIALN-TEGALRDALSLLDKAISVVKDNKITKET 237 >UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 Tax=Neisseria RepID=B4RLX5_NEIG2 Length = 736 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 10/165 (6%) Query: 2 RWYPWLRPDF---EKLVASYQ----AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D E +V + Q GR HHA L+ G+G + L++ L C+ Q Sbjct: 38 KWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAKSLNCENAQ 97 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C + AG + D + + NT G+D +REV E G KV + Sbjct: 98 HGEPCGVCQSCTQIDAGRYVDLLEI--DAASNT-GIDNIREVLENAQYAPTAGKYKVYII 154 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRC 159 + +L+ +A NA+LKTLEEPP F LAT +P ++ T+ SRC Sbjct: 155 DEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRC 199 >UniRef50_C1ZK45 Putative uncharacterized protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZK45_PLALI Length = 365 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 18/266 (6%) Query: 11 FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK--SCGHCRGCQLM 68 E+L + + GR H L G+G + ++ +LC++ + H+ +CG C C+ Sbjct: 14 IEQLRKAVERGRLAHGYLFVGPQGVGKRLVAQKFAQAILCKERKPHELEACGTCTSCRPF 73 Query: 69 QAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARL---------GGAKVVWVTDAAL 119 AG HPD+ + +GK + +D + E + G K+ + DA L Sbjct: 74 LAGNHPDFQVVECPEGKREIPIDLLVGSKENRGQEGLCHGLSLKPLSGSRKIAIIDDAHL 133 Query: 120 LTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE 179 L DA ANA+LKTLEEPP L E +L T+RSRC L + LS E Sbjct: 134 LNDAGANAILKTLEEPPELAVLILVASTLETVLPTIRSRCHLVRFQQLGYEDIEALLSAE 193 Query: 180 VTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGD-----WYSLLA 234 ++ + ++ GS A + W+ R+TL + L G +S L Sbjct: 194 GSIETGMVKEVSQMCDGSLSMAKEMLDPALWELRKTLRKTLCERRIPGQKTAQMIFSYLE 253 Query: 235 ALNHEQAPAR--LHWLATLLMDALKR 258 + + E + R + + ++D L+R Sbjct: 254 SHSSETSAQRESIQHIFRFVIDDLRR 279 >UniRef50_C4LLH9 DNA polymerase III, delta' subunit n=12 Tax=Corynebacterineae RepID=C4LLH9_CORK4 Length = 452 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 6/154 (3%) Query: 16 ASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPD 75 +++Q+ HA L PG G A + L+C++ CG C C+ AGTH D Sbjct: 75 SAHQSAHMTHAWLFTGPPGAGRSVAAKAFAASLMCKEET--PGCGQCEACRTALAGTHTD 132 Query: 76 YYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEP 135 T+ PE + V VR++ E + +VV V DA L DA ANALLK++EEP Sbjct: 133 IVTIVPEG--VVIPVKQVRDMIEAASRMPTTAQWRVVIVEDADRLNDAGANALLKSIEEP 190 Query: 136 PAETWFFLA--TREPERLLATLRSRCRLHYLAPP 167 P T F L + +P+ + T+RSRCR Y+ P Sbjct: 191 PPRTVFILCAPSTDPDDVHVTIRSRCRHVYIPTP 224 >UniRef50_C0W271 DNA polymerase III, delta prime subunit n=4 Tax=Actinomycetales RepID=C0W271_9ACTO Length = 390 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 81/167 (48%), Gaps = 4/167 (2%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA L+ PG G A L C PQ CG C GC+ + A THPD A EK Sbjct: 40 HAWLVTGPPGSGRSTAARAFVAALQCTHPQV-IGCGECDGCRHVMAKTHPDVTDFATEK- 97 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 + + ++ VR G +V+ + DA + + +N LLK +EEPPA T + L Sbjct: 98 -SIISIEEVRAFMHNAQSAPSQGKWRVILLEDADRMQERTSNLLLKAIEEPPARTVWVLC 156 Query: 145 TREPERLLATLRSRCR-LHYLAPPPEQYAVTWLSREVTMSQDALLAA 190 PE L+ T+RSRCR ++ PP +Q A + R +DA AA Sbjct: 157 APSPEDLITTIRSRCRQVNLRIPPVKQVAQLLMRRHGVSYEDAYQAA 203 >UniRef50_Q5M0Z8 DNA polymerase III delta prime subunit n=34 Tax=Streptococcus RepID=Q5M0Z8_STRT1 Length = 291 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 9/198 (4%) Query: 8 RPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQL 67 R FE+ + R HA L G D A+ A SR+ C P+ C HCR C+L Sbjct: 8 RKLFEEFSQIIRENRLSHAYLFSGDFGSLDMAIWLAQSRF--CLTPEDGLPCSHCRPCRL 65 Query: 68 MQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANA 127 + G D + P+ + D +R++T + ++ + G A+V + DA + AAN+ Sbjct: 66 IAQGDFSDVKLVEPQG--QIIKTDIIRQLTREFSQSSFEGHAQVFIIRDADKMHVNAANS 123 Query: 128 LLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE-VTMSQDA 186 LLK +EEP ++ + FL T + R+L T++SR +L Y P + Y L RE + ++Q Sbjct: 124 LLKFIEEPQSQIYIFLLTADDSRILPTIKSRAQLFYF-PKNKAYLEDLLQREGLLLTQAK 182 Query: 187 LLAALRLSAGSPGAALAL 204 +LA A AL+L Sbjct: 183 VLADF---AKDETQALSL 197 >UniRef50_C8WQ66 DNA polymerase III, subunits gamma and tau n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQ66_ALIAD Length = 586 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 117/237 (49%), Gaps = 17/237 (7%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGHCRGCQLMQA 70 + L + ++G+ HA L G G + L++ + C QP+ G + C C C +Q Sbjct: 26 QTLTNALKSGQLAHAYLFCGPRGTGKTSTAKLLAKAVNCLQPRDGFEPCNACEACTSIQR 85 Query: 71 GTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLK 130 G++ D + + GVD +R++ + ++ + KV V + +LT A NALLK Sbjct: 86 GSNVDVQEI---DAASNRGVDEIRDLRDHVHYLPTMAKKKVYIVDEVHMLTPEAFNALLK 142 Query: 131 TLEEPPAETWFFLATREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSREVTMSQ--DAL 187 TLEEPPA F LAT EP RL AT+ SRC R + PE A+ R V SQ +A Sbjct: 143 TLEEPPAHVLFVLATTEPHRLPATIISRCQRFDFRRIAPE--AIVERLRLVAQSQGIEAA 200 Query: 188 LAAL-RLSAGSPGA---ALALFQG----DNWQARETLCQALAYSVPSGDWYSLLAAL 236 +AL RL+ + G ALALF+ N + +T + SV G +L+ L Sbjct: 201 DSALWRLAEAADGGLRDALALFEQAAAFGNGRIDDTTVADVVGSVDIGSLVALVGDL 257 >UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z526_9NEIS Length = 657 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/138 (36%), Positives = 75/138 (54%), Gaps = 3/138 (2%) Query: 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 R HHA L+ G+G + L++ L C+ G + CG C C+ + AG D + Sbjct: 57 RLHHAYLLTGTRGVGKTTIARILAKSLNCEAGVGAEPCGECSACRQIDAGRFVDLLEI-- 114 Query: 82 EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWF 141 + NT G+D +REV E G KV + + +L+ +A NA+LKTLEEPPA F Sbjct: 115 DAASNT-GIDNIREVLENAQYAPTSGRYKVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKF 173 Query: 142 FLATREPERLLATLRSRC 159 LAT +P+++ T+ SRC Sbjct: 174 ILATTDPQKVPVTVLSRC 191 >UniRef50_A4E9Y5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9Y5_9ACTN Length = 825 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 12/149 (8%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQ-----QPQGHKSC---GHCRGCQLMQAGT 72 GR HA L G G + L++ LLC+ + +G C G C C+L+ G Sbjct: 33 GRLSHAYLFCGPRGTGKTTMARILAKALLCRNAEAARAEGASGCLPDGACEECELIAEGN 92 Query: 73 HPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 HPD Y L + GVD VRE + +N G K+ + + +LT AA NALLKT Sbjct: 93 HPDVYEL---DAASRTGVDNVREEIINSVNFAPVRGKYKIYIIDEVHMLTTAAFNALLKT 149 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCR 160 LEEPPA F L T +P+++L T+ SRC+ Sbjct: 150 LEEPPAHVIFVLCTTDPQKILETILSRCQ 178 >UniRef50_C2MCK6 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteroidales RepID=C2MCK6_9PORP Length = 429 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 7/162 (4%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ--PQGHKSCGHCRGCQLMQAG 71 L ++ Q G+ HA L G+G + L+R + C+Q PQG ++CG C CQ A Sbjct: 30 LKSAIQQGKIAHAYLFCGPRGVGKTSAARILARTINCEQLTPQG-EACGVCANCQ---AA 85 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 H + + + VD +R + E + + G KV + + +L+ A NA LKT Sbjct: 86 LHQRAFNIYELDAASNNSVDDIRRLNEDVYIRPQQGKYKVYIIDEVHMLSSGAFNAFLKT 145 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAP-PPEQYA 172 LEEPP F LAT E +++L T+ SRC+++ P PPEQ A Sbjct: 146 LEEPPGYVVFILATTEKDKVLPTILSRCQVYDFKPIPPEQIA 187 >UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0B5_LYSSC Length = 636 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L S + + HA L G G + ++ L CQ P + CG C CQ ++ Sbjct: 30 LENSIKHNKVAHAYLFTGPRGTGKTSAAKIFAKLLNCQSPIDYNPCGECVCCQ----DSN 85 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + GVD +R++ EK+N G KV + + +L+ AA NALLKTLE Sbjct: 86 TDIIEMDAASNN---GVDDIRDLREKVNYAPAFGKKKVYIIDEVHMLSTAAFNALLKTLE 142 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALL 188 EPPA F LAT EP ++ AT+ SRC+ + + V + + V + + AL Sbjct: 143 EPPAHIVFILATTEPHKIPATILSRCQRYDFRRISQDDIVHRMKTIVEAESVEIEEQALR 202 Query: 189 AALRLSAGSPGAALAL 204 +++AG AL+L Sbjct: 203 LISQIAAGGMRDALSL 218 >UniRef50_Q3A3X2 DNA polymerase III, delta prime subunit n=2 Tax=Desulfuromonadales RepID=Q3A3X2_PELCD Length = 321 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 148/321 (46%), Gaps = 28/321 (8%) Query: 11 FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQA 70 EK V+S R HA L + G+G + AL++ L C SCG C C + Sbjct: 15 LEKAVSS---KRLPHAYLFEGPEGIGKRLVALALTKILFCA---NGNSCGDCPACHKVDH 68 Query: 71 GTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLK 130 HPD + L P+ +++ ++ +R + ++L+ KV + A + AAANALLK Sbjct: 69 HNHPDLHQLGPDG--SSIKIEQIRALQKELSYRPLEAPYKVSIIDGAEKMNPAAANALLK 126 Query: 131 TLEEPPAETWFFLATREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSR-EVTMSQDALL 188 TLEEP ++T L T P+ +L T+RSRC RL + P E+ + + + +Q +L Sbjct: 127 TLEEPRSQTLLILLTPAPDAVLPTIRSRCQRLPFSRIPRERLQEVLVEQLNIEDAQAHIL 186 Query: 189 AALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPAR---- 244 A LS GS AL + Q R+ L + L ++ SG S++ LN Q A Sbjct: 187 AT--LSEGSFKKALGKDRELYLQRRKELLKNLT-ALSSG---SIIPLLNLAQKFAEEKDL 240 Query: 245 ----LHWLATLLMDALKRHHG--AAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 L + D L HG + NVD+ + ++ + S L L + R Sbjct: 241 LFDILEIIQAFYRDLLLLQHGRPMDDLVNVDMLETLQSVSRRENVSSLLGKLDALMTSRR 300 Query: 299 QLMSVTGINRELLITDLLLRI 319 L +NR+L + LLLR+ Sbjct: 301 HLER--NVNRQLAMEVLLLRL 319 >UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJR0_FERNB Length = 517 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 3/154 (1%) Query: 24 HHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEK 83 +HA + G G L++ L C++ Q + C C CQ + G+H D L Sbjct: 36 NHAYIFAGPRGTGKTTTARILAKSLNCEKNQFGEPCNECTSCQAIDNGSHLDVIELDAAS 95 Query: 84 GKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFL 143 + G+D +R++ E +N +G KV + + +LT A NALLKTLEEPP F L Sbjct: 96 NR---GIDEIRKIKEGVNFTPVMGKYKVYIIDEVHMLTREAFNALLKTLEEPPQHIVFIL 152 Query: 144 ATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS 177 AT PE++ T+ SRC + E+ ++ L Sbjct: 153 ATTNPEKIPPTIMSRCHVLEFRNISEENIISKLK 186 >UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=Desulfuromonadales RepID=Q3A7L0_PELCD Length = 582 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 12/225 (5%) Query: 17 SYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDY 76 + + GR HHA L G+G + ++ L C+Q + C C+ C+ + AG D Sbjct: 31 AIKTGRVHHAFLFTGARGVGKTSAARIFAKALNCEQGLSPQPCNVCQSCREISAGQGLDV 90 Query: 77 YTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPP 136 + + G + GVD +RE+ E + K+ + + +L+ A NALLKTLEEPP Sbjct: 91 FEI---DGASNTGVDDIRELRENIRYLPSRSRYKIFIIDEVHMLSTNAFNALLKTLEEPP 147 Query: 137 AETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAG 196 F AT EP ++ T+ SRC+ P V L +E+ ++ + +S Sbjct: 148 EHAKFIFATTEPHKIPITILSRCQRFDFRKIPLPLIVARL-KEIAAAE-----GISISER 201 Query: 197 SPGAALALFQGDNWQARETLCQALAY---SVPSGDWYSLLAALNH 238 S G +G A+ T Q +A+ +V D LL ++ Sbjct: 202 SLGLVARRGEGSMRDAQSTFDQVIAFCGDAVGEDDVQGLLGMVDR 246 >UniRef50_UPI00016C0463 DNA polymerase III, delta prime subunit n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0463 Length = 323 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 6/154 (3%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 ++ F+K++ + + H+ + + G+G +L +++ LLC+ +CG C C+ Sbjct: 9 IKDYFKKVI---KINKISHSYIFEGNKGVGKKSLAAEIAKILLCEDAIDEIACGKCSACK 65 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAA 125 +M A HPD+ + EK ++ ++E + ++++ G K+ + +A L Sbjct: 66 MMDAKVHPDF--IQIEKDTKITKIETIKEKLLKEVSIKPYKGKYKIFVIAEAETLRSVGQ 123 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRC 159 NA+LKT+EEPP FL T E LL T+RSRC Sbjct: 124 NAILKTIEEPPTYALIFLVTTNIEMLLPTIRSRC 157 >UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 Tax=Exiguobacterium RepID=B1YGC8_EXIS2 Length = 561 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 21/212 (9%) Query: 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 R HA L G G +L +++ + C+Q ++ C C C+ + G+ PD + + Sbjct: 36 RMSHAYLFSGPRGTGKTSLAKIIAKAINCEQAPVNEPCNECPTCRAITEGSSPDVFEI-- 93 Query: 82 EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWF 141 + GVD +RE+ +K+ KV + + +L+ A NALLKTLEEPPA F Sbjct: 94 -DAASNNGVDEIREIRDKVKYPPSEAAYKVYIIDEVHMLSTGAFNALLKTLEEPPAHAIF 152 Query: 142 FLATREPERLLATLRSRC-----RLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAG 196 LAT EP ++ AT+ SRC + H + E+ + + ++ AL R + G Sbjct: 153 ILATTEPHKIPATIISRCQRFDVKRHEVDQLMERMQYILSDQTIGYTETALRLIARAADG 212 Query: 197 SPGAALALFQGDNWQARETLCQALAYSVPSGD 228 AL+L L QA+A+S +GD Sbjct: 213 GMRDALSL-----------LDQAVAFS--NGD 231 >UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LV54_9FIRM Length = 691 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 3/144 (2%) Query: 17 SYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDY 76 + AGR HA L G G + L++ L C++ + CG C+ C + GT D Sbjct: 58 AISAGRIAHAYLFSGPRGTGKTSTAKILAKSLNCEKGPTPEPCGVCKNCTKIADGTALDV 117 Query: 77 YTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPP 136 + + + G+D +R++ EK+ G KV + + +LT A NALLKTLEEPP Sbjct: 118 FEI---DAASNRGIDEMRDLREKVKFTPAEGRYKVYIIDEVHMLTTEAFNALLKTLEEPP 174 Query: 137 AETWFFLATREPERLLATLRSRCR 160 A F LAT EP ++ AT++SRC+ Sbjct: 175 AHVVFILATTEPHKVPATIQSRCQ 198 >UniRef50_C7D0N7 DNA polymerase III delta prime subunit n=38 Tax=Enterococcus RepID=C7D0N7_ENTFA Length = 324 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 8/225 (3%) Query: 11 FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQA 70 +++L S++ GR HA L + G G +++++ C + C C C + Sbjct: 23 YKQLQKSFEHGRLAHAYLFEGDTGTGKQEFGLWMAKHVFCTNLVNQQPCNECHNCVRINE 82 Query: 71 GTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLK 130 HPD +AP+ T+ V+ +RE+ + ++ KV + +A ++ AAN+LLK Sbjct: 83 NEHPDVLRIAPDG--QTIKVNQIRELKAEFSKSGVETAKKVFLIQEADKMSTGAANSLLK 140 Query: 131 TLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAA 190 LEEP + L T R+L T++SRC+ + P ++ + L ++ + A+L A Sbjct: 141 FLEEPEGQILAILETTSLSRILPTIQSRCQTLHFQPLVKKTLIDRLIKQGIGEKTAILLA 200 Query: 191 LRLSAGSPGAALALFQGDNW--QARETLCQALAYSVPSGDWYSLL 233 ++ ++ D W +ARE + Q Y + S D + + Sbjct: 201 ELTNSFEKAVEIS---QDEWFNEAREIILQWFNY-LKSNDLQAFI 241 >UniRef50_A6BZZ4 DNA polymerase III, tau/gamma subunit n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZZ4_9PLAN Length = 353 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 102/216 (47%), Gaps = 13/216 (6%) Query: 9 PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC-QQPQGHKSCGH-CRGCQ 66 P E L + R HALL G+G + L++ L C Q P SC C C+ Sbjct: 13 PILEMLDRALSRSRLPHALLFSGAAGIGKKRVALHLAQCLFCLQTPADELSCCRTCDSCK 72 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAV--------RE-VTEKLNEHARLGGAKVVWVTDA 117 M AGTHPD ++ KN L + + RE V +++ +G ++ + DA Sbjct: 73 QMAAGTHPDLISIECPPDKNILPLSLIIGDDDHRGREGVCYEMSLRPMVGDRRIAIIDDA 132 Query: 118 ALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRL-HYLAPPPEQYAVTWL 176 + +ANALLKTLEEP A L E + +L T+RSRC+L + E A + Sbjct: 133 DKMNAESANALLKTLEEPSANYLMILIASELDAILPTIRSRCQLIRFNRLTQEDVAALLI 192 Query: 177 SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQA 212 +++ S+D + RLSAGS A L +N Q+ Sbjct: 193 DQQLVESEDQAIEIARLSAGSLNIARQLLD-ENLQS 227 >UniRef50_D0LQE3 DNA-directed DNA polymerase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQE3_HALO1 Length = 298 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 79/155 (50%), Gaps = 2/155 (1%) Query: 13 KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT 72 +L + + R HA L+ G+G AL+ + C G + CG C C + AG Sbjct: 27 RLRRALEQNRVAHAYLLSGPAGVGKLTTAVALTAAIECIDAPG-QGCGTCSACSKIAAGI 85 Query: 73 HPDYYTLAPEKGKNTLGVDAVR-EVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 HPD L + + ++ +R +V +L G A+V + +A L +ANALLKT Sbjct: 86 HPDVQLLERQGAAQIIPIETIRTQVIPRLAMPPHEGAARVFLIDEANALPGPSANALLKT 145 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAP 166 LEEPP T FFL T P+ LL T+RSRC+ AP Sbjct: 146 LEEPPPRTHFFLCTTAPDLLLPTIRSRCQRVAFAP 180 >UniRef50_A1WGM6 DNA-directed DNA polymerase n=10 Tax=Comamonadaceae RepID=A1WGM6_VEREI Length = 351 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/267 (32%), Positives = 113/267 (42%), Gaps = 49/267 (18%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP----------- 53 PW+ +L+A RGH A L+ G+G AL L R LC P Sbjct: 11 PWIAAQRSRLLAQ----RGH-AWLLHGPSGLGQYALGMELVRAWLCDAPIAPGDVPIAPG 65 Query: 54 -----QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLG------------------- 89 QG +CG C C + TH D L PE LG Sbjct: 66 NAPAAQG-AACGQCGSCHAIDVRTHADLCVLMPEVQMMALGWPLSEKAQAEIDDKKRKPS 124 Query: 90 ----VDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLAT 145 V+A+R+ E A G K V V A + ANALLKTLEEPP + F LA+ Sbjct: 125 REIRVEAMRDALEFAQRTAGRGRGKAVLVYPAEQMNQITANALLKTLEEPPGQIRFVLAS 184 Query: 146 REPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALF 205 LL T+RSRC H + P WL + ++ +A + LR + G P ALAL Sbjct: 185 EAAHLLLPTIRSRCLGHAMVWPAPVQMQAWLQAQ-GLAPEAAASFLRAAGGRPDDALALA 243 Query: 206 Q-GDNWQARETLCQALAYSVPS--GDW 229 Q G + QA +L QA+A + GDW Sbjct: 244 QSGRSPQAWASLPQAMARGEVAALGDW 270 >UniRef50_A3DH83 DNA polymerase III, delta prime subunit n=3 Tax=Clostridium thermocellum RepID=A3DH83_CLOTH Length = 329 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 15/285 (5%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 E L R HA + G+G + + L+C KSCG+CR C+L + Sbjct: 14 ESLKRFIDNNRIGHAYIFSGPEGIGKSTVAKIFASILMCDDAAVDKSCGNCRSCRLFENR 73 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 T+PD+ L E ++GVD +R + + + KV + +A +T A N LLKT Sbjct: 74 TNPDFGVL--ETRGLSIGVDEIRNLQQDICIRPLYSKRKVYLIREAEKMTVQAQNCLLKT 131 Query: 132 LEEPPAETWFFLATREPERLLATLRSR-CRLHYLAPPPEQYAVTWLSRE-VTMSQDALLA 189 LEEPP LAT E LL T+RSR R+++ ++ +SR Q +A Sbjct: 132 LEEPPEYAVIILATSNYESLLETIRSRSVRINFAKNTFDEVKRFIVSRAGGDFEQADFIA 191 Query: 190 ALRLSAGSPGAALALFQGDNWQA-RETLCQALAYSVPSGDWYSLLAAL-----NHEQAPA 243 A + G G A+ L + + ++ RE A A + D+ +L N E + Sbjct: 192 A--YADGVIGRAVELMESERFKELREKAIDA-AVRLSGSDFEDMLNISRMFDENKEDVDS 248 Query: 244 RLHWLATLLMDALK--RHHGAAQVTNVDVPGLVAELANHLSPSRL 286 L + D L + + N D ++ + A S +L Sbjct: 249 ILDVILLFYRDLLMAGKFGNEKLLINSDKKDIILKYAGRFSAGKL 293 >UniRef50_B9L692 DNA polymerase III, subunits gamma and tau n=1 Tax=Nautilia profundicola AmH RepID=B9L692_NAUPA Length = 493 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 82/335 (24%), Positives = 138/335 (41%), Gaps = 47/335 (14%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 LV S R HA L L G G ++ L C C C C + H Sbjct: 25 LVNSLDKNRIAHAYLFSGLRGAGKTTTARIFAKALQCDHGPTSNPCEECENCIMANESRH 84 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + + ++ +RE+ E +G K+ + + +LT+ A NALLKTLE Sbjct: 85 IDIIEMDAASNRK---IEDIRELIEHTKYKPSVGKYKIFIIDEVHMLTNEAFNALLKTLE 141 Query: 134 EPPAETWFFLATREPERLLATLRSRC---RLHYLAP-PPEQYAVTWLSRE-VTMSQDALL 188 EPP F +AT +P +L AT+ SR R + + E Y + L+ E V ++AL Sbjct: 142 EPPEYVKFIMATTDPLKLPATILSRVQHFRFNKIKNGIIENYLIKILAIENVEFDEEALR 201 Query: 189 AALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYS---LLAALNHEQAPARL 245 ++ + GS +L L L QA+A+S D S +L +N E Sbjct: 202 LIIKAAKGSVRDSLTL-----------LDQAIAFSKGKIDLDSVVDMLGVINPE------ 244 Query: 246 HWLATLLMDALKRHHG------AAQVTNVDVPGLVAELANHLSPS---------RLQAIL 290 + + DA+K ++ + D+ ++ E+ +L + +Q Sbjct: 245 --IINEIFDAVKNSDKKRIKEIVGEIKDYDIESIIDEVIIYLKDALFEGSLPLITVQRFF 302 Query: 291 GDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 V ++E + T + E ++T + LR+ ++P Sbjct: 303 NIVADVKELIKYNT--DNEFVLTLMFLRMSEAVKP 335 >UniRef50_A8SS16 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS16_9FIRM Length = 330 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/288 (22%), Positives = 128/288 (44%), Gaps = 20/288 (6%) Query: 16 ASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPD 75 +S + G+ +I G G L AL + L C++ G + C HC+ C + G PD Sbjct: 19 SSIELGKISQGYIINGETGSGKKTLTRALVKTLQCEEG-GTEPCNHCKSCLQCETGNQPD 77 Query: 76 YYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEE 134 + +K N + V+ +R+ V ++ K+ + DA LL A NALLKT+EE Sbjct: 78 IIWVTHDKP-NVISVEEIRDQVNSDIDIKPYSSRYKIYVIEDAQLLNVNAQNALLKTIEE 136 Query: 135 PPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLS 194 P+ L T +++L T++SRC + + P E + +L E+ + + + + Sbjct: 137 APSYAIIILLTNNIDKMLQTIQSRCIVLNVKPVREHDILDYLMNELKLDKQKADFCMDFA 196 Query: 195 AGSPGAALALFQGDNWQA------------RETLCQALAYSVPSGDWYSLLAALNHEQAP 242 G+ G A+ L D ++ RE + +++ + + Y L + + Sbjct: 197 QGNLGKAIRLATSDEYREIKENVVKIMRHLREMSVDDMLFAIKNMELYKLKIS---DYID 253 Query: 243 ARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAIL 290 + W +LM LK + ++ + + + ++H+S ++ +L Sbjct: 254 LMMMWYRDVLM--LKVSNNPGRLMFKEYYSDIRKQSSHISYEGIEKVL 299 >UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Betaproteobacteria RepID=Q3SLE5_THIDA Length = 581 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 82/172 (47%), Gaps = 10/172 (5%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + GR HHA L+ G+G L L++ L C+ Sbjct: 18 KWRPRAFADLRGQEHVVQALSNALTQGRLHHAYLLTGTRGVGKTTLARILAKCLNCESGV 77 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + AG D L + NT GVD +REV + +G KV + Sbjct: 78 SATPCGTCSACTQIDAGRFVDLLEL--DAASNT-GVDNMREVLDNAQYAPTVGRYKVYII 134 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAP 166 + +L+ A N++LKTLEEPPA F LAT +P+++ T+ SRC L P Sbjct: 135 DEVHMLSKPAFNSMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKP 186 >UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=cellular organisms RepID=Q7NXL6_CHRVO Length = 639 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 3/138 (2%) Query: 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 R HHA L+ G+G + L++ L C+ + CG C+ C+ + +G D + Sbjct: 36 RLHHAYLLTGTRGVGKTTIARILAKSLNCETGTTAEPCGECQACRQIDSGRFVDLLEI-- 93 Query: 82 EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWF 141 + NT G+D +REV E +G KV + + +L+ +A NA+LKTLEEPP F Sbjct: 94 DAASNT-GIDNIREVLENAQYAPTMGRFKVYIIDEVHMLSKSAFNAMLKTLEEPPGHVKF 152 Query: 142 FLATREPERLLATLRSRC 159 LAT +P+++ T+ SRC Sbjct: 153 ILATTDPQKVPVTVLSRC 170 >UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ4_9FIRM Length = 593 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 11/187 (5%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA L G G ++ ++ + C+ + HK C C C +Q G+HPD + Sbjct: 45 HAYLFCGPRGTGKTSIAKIFAKVINCESKE-HKPCLQCDNCLAVQNGSHPDIIEIDAASN 103 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAA-LLTDAAANALLKTLEEPPAETWFFL 143 GV+ VR + EK+ ++A L G V++ D +++ A NALLKT+EEPP F L Sbjct: 104 N---GVEEVRNLIEKV-KYAPLKGKYKVYIIDEVHMMSAGAFNALLKTIEEPPEHVIFIL 159 Query: 144 ATREPERLLATLRSRCRLHYLAPPPEQYAV----TWLSRE-VTMSQDALLAALRLSAGSP 198 AT EP ++L T+ SRC+ P+ V T L +E + D + +L+ G Sbjct: 160 ATTEPHKVLPTIISRCQRFDFTKVPKNEIVSRIHTILEKEHIECDDDVIELIAQLADGGL 219 Query: 199 GAALALF 205 AL++ Sbjct: 220 RDALSIL 226 >UniRef50_Q1D8K6 DNA polymerase III, delta' subunit n=2 Tax=Cystobacterineae RepID=Q1D8K6_MYXXD Length = 344 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 19/211 (9%) Query: 11 FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC-QQPQGHKSCGHCRGCQLMQ 69 + L A+ ++G HHA L G+G + L++ L C +QP CG C CQ ++ Sbjct: 13 VDALQAALRSGAVHHAYLFAGPEGVGKELAAVGLAQALTCPEQPD--VGCGACASCQRVE 70 Query: 70 AGTHPDYYTLAPEKGKNTLG----------------VDAVREVTEKLNEHARLGGAKVVW 113 G HPD + P+ + + G V+ VR++ E++ KV Sbjct: 71 RGLHPDVTWVMPDDERVSRGLAGRSDFTGTPSRELRVEQVRQLQERIALRGLESRRKVAL 130 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + A + A NA LKTLEEPP++T L +RLL T+RSRC + P P Sbjct: 131 IVSAQTMNVQAQNAFLKTLEEPPSDTTIILVASAIDRLLPTIRSRCGKVHFGPLPVDMVA 190 Query: 174 TWLSREVTMSQDALLAALRLSAGSPGAALAL 204 ++ + + + A ++ GS G A+AL Sbjct: 191 QRVAEARKLDAETAMLAAVMAGGSLGRAMAL 221 >UniRef50_C8NKG7 DNA polymerase III, delta' subunit n=3 Tax=Corynebacterium RepID=C8NKG7_COREF Length = 417 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 94/207 (45%), Gaps = 7/207 (3%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 H+ L PG G A + L+C P CG C C+ A TH D + P + Sbjct: 56 HSWLFTGPPGSGRSVAARAFAAALVCSDPD-EVGCGRCEHCRATLADTHGDVVFIQPHE- 113 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 ++G+D +R V + + +V+ + +A LT+ A NALLKT+EEPP T L Sbjct: 114 -LSIGIDLMRTVVDDAARLPTVSNWRVIILENADRLTEPAGNALLKTVEEPPERTIIILC 172 Query: 145 --TREPERLLATLRSRCRLHYL-APPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAA 201 + +PE ++ TLRSRCR Y+ P EQ +S DA LAA S G G A Sbjct: 173 APSTDPEDIMVTLRSRCRHVYIPTPTIEQVTRILVSEGGVAEDDARLAAAS-SGGHIGRA 231 Query: 202 LALFQGDNWQARETLCQALAYSVPSGD 228 L Q R L+ + GD Sbjct: 232 RHLVHNQKVQVRRANILNLSELIFHGD 258 >UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJR0_9GAMM Length = 587 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 102/234 (43%), Gaps = 28/234 (11%) Query: 2 RWYPWLRPDFEKLVA----------SYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ 51 +W P FE LV + R HHA L G+G + L+R L C+ Sbjct: 9 KWRPGR---FEDLVGQPHVVRALANALSGDRLHHAYLFAGTRGVGKTTIARILARCLNCE 65 Query: 52 QPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKV 111 CG CR C + G H D + + VD RE+ + ++ G KV Sbjct: 66 TGITATPCGECRSCVEIAEGRHLDLIEV---DAASRTRVDDTRELLDNVSYAPTAGRFKV 122 Query: 112 VWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQY 171 + + +L++ + NALLKTLEEPP F LAT +P++L T+ SRC L P P Sbjct: 123 YLIDEVHMLSEKSFNALLKTLEEPPDHVKFLLATTDPQKLPVTVLSRCLQFNLKPMPPAL 182 Query: 172 AVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLC---QALAY 222 L+R +L A L A PGA L L + R+ L QA+AY Sbjct: 183 IAEHLTR--------ILEAEGLQA-EPGALLRLGEAAEGSMRDALSLTDQAIAY 227 >UniRef50_B0SRY5 DNA polymerase III gamma subunit n=6 Tax=Leptospira RepID=B0SRY5_LEPBP Length = 497 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 9/171 (5%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L ++++ + HA + G+G + L++ L C++P G + C C C + G Sbjct: 35 LQNAFKSKKIGHAYIFIGPRGVGKTTIARILAKRLNCERPDGVEPCNECTSCLEITKGNS 94 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAA-LLTDAAANALLKTL 132 D + + + N+ GVD +RE+ E + +A +GG V++ D +L+ AA NALLKTL Sbjct: 95 NDVFEI--DAASNS-GVDNIRELRENVKFNA-MGGKYRVYILDEVHMLSGAAFNALLKTL 150 Query: 133 EEPPAETWFFLATREPERLLATLRSRCR-LHYLAPPP---EQYAVTWLSRE 179 EEPPA F LAT E ++ T+ SRC+ H+ P + Y T ++E Sbjct: 151 EEPPAHVVFILATTEYHKIPETILSRCQDFHFRKVPVTVLQNYIETLCTKE 201 >UniRef50_C8X0H8 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0H8_DESRD Length = 538 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 26 ALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGK 85 A L G+G + L++ + C+Q + C CR C+ + GT D + G Sbjct: 40 AYLFSGTRGVGKTTVARILAKAINCEQGPASEPCNQCRHCREITQGTGVDVVEI---DGA 96 Query: 86 NTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLAT 145 + GVD VR++ E + KV+ + +A +L+ AA NALLKTLEEPP + F +AT Sbjct: 97 SHTGVDHVRKLKEDVGYAPLSCRYKVIIIDEAHMLSKAAFNALLKTLEEPPPQAIFIMAT 156 Query: 146 REPERLLATLRSRCRLHYLAPPPEQYAVTWLSR-----EVTMSQDALLAALRLSAGSPGA 200 EP R AT+ SRC+ H ++ L R + M +A+ R AGS Sbjct: 157 TEPHRFPATIISRCQHHIFQRLRQEELTDHLRRVLENEAIEMDAEAVRLIARKGAGSVRD 216 Query: 201 ALALF 205 A++L Sbjct: 217 AMSLL 221 >UniRef50_D1AJH2 DNA polymerase III, subunits gamma and tau n=2 Tax=Fusobacteriaceae RepID=D1AJH2_SEBTE Length = 496 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 32/235 (13%) Query: 4 YPWLRP-DFEKLVASYQAGRGH---------------HALLIQALPGMGDDALIYALSRY 47 Y RP +FE++ AG+GH HA L G+G + +++ Sbjct: 6 YRKYRPQNFEEI-----AGQGHIVKAIRNSLKENKLSHAYLFNGPRGVGKTTIARLIAKG 60 Query: 48 LLC-QQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARL 106 + C CG C C+ + AG D + + G+D +RE+ EK+N Sbjct: 61 VNCLTNGISDHPCGTCDNCREIAAGISMDMVEIDAASNR---GIDEIRELKEKINYQPVN 117 Query: 107 GGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAP 166 G KV + + +LT A NALLKTLEEPP+ F LAT E +++ T+ SRC+ + P Sbjct: 118 GNKKVYIIDEVHMLTKEAFNALLKTLEEPPSHVIFILATTEVDKIPDTVISRCQRYDFLP 177 Query: 167 PPEQYAVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQ--GDNWQARE 214 + L + + +++L R S GS + ++F+ N+ E Sbjct: 178 LNMNDIIEMLKMVAEKENIKIDEESLKLIYRKSEGSARDSFSIFEQVASNFSGEE 232 >UniRef50_Q0EXX3 DNA polymerase III subunits gamma and tau n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX3_9PROT Length = 561 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 10/166 (6%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 RW P D L + +G HA L+ + G+G + ++ C+QP+ Sbjct: 9 RWRPQQFSDLVGQDVVVRTLKNALASGNLAHAYLLCGIRGVGKTTIARLMAMAANCEQPE 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C+ + G++ D + + GVD VRE+ + + +V + Sbjct: 69 DGEPCGRCKACRGIADGSNLDVQEM---DAASHTGVDDVREILDGVRYPPSSLKTRVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR 160 +A +L+ +A NALLKTLEEPPA F LAT E E+L T+RSRC+ Sbjct: 126 DEAHMLSKSAFNALLKTLEEPPAHVLFILATTESEKLPVTVRSRCQ 171 >UniRef50_A8U6Y2 DNA polymerase III subunit delta' n=1 Tax=Carnobacterium sp. AT7 RepID=A8U6Y2_9LACT Length = 328 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 8/207 (3%) Query: 6 WLRPDFEK-LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 WL+P K + Q + HA L + + G G + L+ LLCQ + + C C+ Sbjct: 9 WLQPVLVKQFTKTVQQKQLAHAYLFEGISGTGKKEMSLWLAASLLCQDGEANLPCEKCQN 68 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C+ + HPD + P+ ++ V+ VR + + ++ K+ + D +T A Sbjct: 69 CRRVFEHQHPDVIEIIPDGL--SIKVEQVRNLKAEFSKSGVESHQKIFIIEDVEKMTTGA 126 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRL-HYLAPPPEQYAVTWLSREVTMS 183 AN+LLK LEEP FL T +R+L T+ SRC+L H+ A ++ ++ ++++ Sbjct: 127 ANSLLKFLEEPEGSAVAFLLTTAKQRILPTILSRCQLVHFQALTKKKLMAELETKGLSIN 186 Query: 184 QDALLAALRLSAGSPGAALALFQGDNW 210 Q +LL L S AL + GD W Sbjct: 187 QASLLVQL---TNSVEEALEM-NGDEW 209 >UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseriaceae RepID=C5TP18_NEIFL Length = 666 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 3/139 (2%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA 80 GR HHA L+ G+G + L++ L C+ + CG C C + +G + D + Sbjct: 35 GRLHHAYLLTGTRGVGKTTIARILAKSLNCENAVHGEPCGQCESCTQIDSGRYVDLLEI- 93 Query: 81 PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETW 140 + NT G+D +REV E G KV + + +L+ +A NA+LKTLEEPP Sbjct: 94 -DAASNT-GIDNIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVK 151 Query: 141 FFLATREPERLLATLRSRC 159 F LAT +P ++ T+ SRC Sbjct: 152 FILATTDPHKVPITVLSRC 170 >UniRef50_A6LPM5 DNA polymerase III delta' subunit n=3 Tax=Clostridium RepID=A6LPM5_CLOB8 Length = 310 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 10/240 (4%) Query: 86 NTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLAT 145 N+ GVD VR + ++N+ G KV+ + LT A NALLKT+EEPP L + Sbjct: 68 NSFGVDDVRNIISEVNKKPYEGDKKVLILYKCDKLTVQAQNALLKTIEEPPRGVHLILLS 127 Query: 146 REPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV-TMSQDALLAALRLSAGSPGAALAL 204 E +L T++SRC+++ L P ++ +++L + +S+D AAL SAG PG Sbjct: 128 DSLEVILDTIKSRCQIYRLTPLNKEEILSYLEEKYNNLSEDDKKAALAYSAGIPGNVDRF 187 Query: 205 FQGDNWQARETLCQALAYSVPSGD-----WYSLLAALNHEQAPARLHWLATLLMDA--LK 257 F D + +C L + S Y L E L+ L + + D LK Sbjct: 188 FSDDKLRNLRDICIELFEDIVSRQKGIILKYEELLKSAKEDKLELLNILLSYIRDILLLK 247 Query: 258 RHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLL 317 + + V N D + ++ +S +L ++L + R S T N ++I+ LL+ Sbjct: 248 ELNDSELVVNFDKIYKIKNISRGISYKKLNSMLEYIKEARINFNSNT--NYSMVISVLLM 305 >UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZX2_HALOH Length = 588 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 14/171 (8%) Query: 1 MRWYPWLRP-DFEKLVASY----------QAGRGHHALLIQALPGMGDDALIYALSRYLL 49 + Y RP +F LV + ++GR HA L G G + + L Sbjct: 4 LSLYRKYRPQNFNDLVGQHHVVRTLKNALESGRIAHAYLFAGPRGTGKTSTAKVFAMALN 63 Query: 50 CQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 C + CG C C+ +Q G D + + G+D +RE+ EK+ + G Sbjct: 64 CIHGPTTEPCGQCENCRKIQKGQSIDVIEIDAASNR---GIDEIRELREKVKFYPNEGEY 120 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR 160 KV + + +LT A NALLKTLEEPP + F LAT EP +++ T+ SRC+ Sbjct: 121 KVYIIDEVHMLTKGAFNALLKTLEEPPEKVVFILATTEPHQVINTILSRCQ 171 >UniRef50_Q2Y982 DNA polymerase III, delta prime subunit n=2 Tax=Nitrosomonadaceae RepID=Q2Y982_NITMU Length = 368 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 93/362 (25%), Positives = 145/362 (40%), Gaps = 63/362 (17%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH-KSCGHC 62 Y W + KL G HALL++ G+G A L++ LC+ K+C C Sbjct: 5 YGWQEEVWRKLT-----GALGHALLLRGRKGLGKLAFARYLAKSRLCENRSVEGKACEVC 59 Query: 63 RGCQLMQAGTHPDYYTLAPE-------------------------------------KGK 85 C + G HPD+ + PE GK Sbjct: 60 ASCHWFEQGNHPDFCLVEPEAATATSVSGEGAGEEGVETGDEAEVQSLPRAVNQLSGSGK 119 Query: 86 NT------LGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAET 139 +T + + +RE+ + +N + G K++ + A ++ AAA+ALLK LEEPP +T Sbjct: 120 STKKPSRQISISQIRELGDFVNITSHQNGYKIILIHPAETMSTAAASALLKNLEEPPLQT 179 Query: 140 WFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAG-SP 198 F L T + + LL T+RSRCR + P A WL ++ + + LA SAG +P Sbjct: 180 LFILITHQAQYLLPTIRSRCRQIIMPAPDAASAALWLKQQGVKAPERCLA----SAGYAP 235 Query: 199 GAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAP---ARLHWLATLLMDA 255 AL D Q + S PSG + +LA Q + WL D Sbjct: 236 LTALEFANEDYLVRHSAFIQQI--STPSG--FDVLARAEEMQKSDLVMVVSWLQKWCYDL 291 Query: 256 LKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDL 315 + + D+ + LA+ L P + L + + Q ++ +N L + +L Sbjct: 292 MSFRMAQKVRYHPDMLAQIKPLASGLDPYSMATYLRAL--DKTQQLARHPLNPRLFLEEL 349 Query: 316 LL 317 L Sbjct: 350 LF 351 >UniRef50_Q1ATA7 DNA polymerase III, subunits gamma and tau n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATA7_RUBXD Length = 567 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 92/208 (44%), Gaps = 15/208 (7%) Query: 2 RWYPWL-------RPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 RW P P L + + GR HA L G G + L+ L C Q Sbjct: 9 RWRPRTFGEIAGQEPVVRTLRRAIETGRVAHAYLFSGPRGTGKTSTAKVLAMGLNCAQGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + AG+ D + + G+D +RE+ +++N G AKV + Sbjct: 69 TPEPCGRCESCRSIVAGSSMDVIEM---DAASNRGIDEIRELRDRVNLAPAAGRAKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLK LEEPP F LAT E ++L T+ SRC+ P V Sbjct: 126 DEVHMLTTEAFNALLKMLEEPPEHVVFVLATTEKHKVLPTIISRCQSFDFRRPGVGTLVE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGS 197 LS + ++AL A R S GS Sbjct: 186 KLSEIARAEGIEAEREALTAIARASGGS 213 >UniRef50_UPI0001BC5C50 DNA polymerase III subunits gamma and tau n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC5C50 Length = 468 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 4/128 (3%) Query: 34 GMGDDALIYALSRYLLCQQPQGH-KSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDA 92 G+G + +++ + C +P+ ++CG C C Q G+ D + + G+D Sbjct: 47 GVGKTTIARLIAKSVNCLEPKEDGEACGVCENCTSFQEGSFLDLVEIDAASNR---GIDE 103 Query: 93 VREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLL 152 +R + EK+N G KV + + +LT A NALLKTLEEPPA F LAT EP+++L Sbjct: 104 IRLLKEKINYQPSQGKKKVYIIDEVHMLTKEAFNALLKTLEEPPAHVIFILATTEPDKIL 163 Query: 153 ATLRSRCR 160 T+ SRC+ Sbjct: 164 PTIISRCQ 171 >UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 Tax=Brachyspira RepID=C0QV83_BRAHW Length = 527 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 3/136 (2%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA L G+G +L +++ L C K CG C C ++ GT D + G Sbjct: 41 HAYLFSGAHGVGKTSLARIIAKALNCVNGPTDKPCGVCPSCTQIENGTPLDVIEI---DG 97 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 + G++ +R + E + G KV + + +T+ A NALLKTLEEPPA F LA Sbjct: 98 ASNRGIENIRTIIENVRISPVAGKYKVYIIDEVHQITNEAFNALLKTLEEPPAHVVFILA 157 Query: 145 TREPERLLATLRSRCR 160 T E ER+L T+RSRC+ Sbjct: 158 TTEAERVLPTIRSRCQ 173 >UniRef50_A8F5Y2 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermotoga lettingae TMO RepID=A8F5Y2_THELT Length = 465 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 14/169 (8%) Query: 4 YPWLRP-DFEKLVASYQA----------GRGHHALLIQALPGMGDDALIYALSRYLLCQQ 52 Y RP +F++++ QA + HA + G G ++ L++ L C Sbjct: 5 YRKYRPKNFDQIIDQLQAKLVLQNALLKNKISHAYIFSGPRGTGKTSVARILAKALNCSN 64 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 +G++ C C C + GTHPD L + G+D +R++ + + L K+ Sbjct: 65 RKGYEPCCECESCLSIDRGTHPDVIELDAASNR---GIDEIRKIRDAVGFKPMLSSHKIY 121 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRL 161 + + +LT A NALLKTLEEPP + F LAT ER+ T+ SRC++ Sbjct: 122 IIDEFHMLTREAFNALLKTLEEPPEKVLFVLATTNLERVPQTIISRCQV 170 >UniRef50_A6TJF9 DNA polymerase III, delta prime subunit n=2 Tax=Alkaliphilus RepID=A6TJF9_ALKMQ Length = 329 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 9/197 (4%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 H + + + G+G + + L++ L C G + C C C+ + HPD + G Sbjct: 27 HGYIFEGIEGLGKHLVAFELAKALCCT-GTGDQPCNQCNSCKKLSHQNHPDVIWIT---G 82 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 + ++ ++ +R++ + + KV + A +T A NALLKTLEEPP+ L Sbjct: 83 EGSIKINTIRDLQKDTQQKPYESRKKVYIIEKAEKMTVQAQNALLKTLEEPPSYVTLILL 142 Query: 145 TREPERLLATLRSRCRLHYLAPPPEQY--AVTWLSREVTMSQDALLAALRLSAGSPGAAL 202 T LL T+ SRC++ P P A L + V + + L+A LS G G AL Sbjct: 143 TANSHSLLPTITSRCQIIKFQPVPLDVIQAFLMLEKNVDLEKAKLMAT--LSNGVVGKAL 200 Query: 203 ALFQGDNWQ-ARETLCQ 218 L + ++Q RE L Q Sbjct: 201 KLLEDPSFQNQREGLIQ 217 >UniRef50_C8W7S8 DNA-directed DNA polymerase n=2 Tax=Atopobium RepID=C8W7S8_ATOPD Length = 389 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 7/212 (3%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA L PG G AL++ +LC Q G +C C + GTHPD + L P Sbjct: 43 HAYLFVGAPGSGKGLAAKALAQCVLCAQG-GDAACDDCIR---ISRGTHPDVHVLTPASA 98 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 L ++ +R++T ++ K+ + A LL + +ANALLKT+EEPPA+T F L+ Sbjct: 99 NGYL-IEQIRQLTADVSLAPMRSTHKIYVIDRADLLRENSANALLKTIEEPPADTIFILS 157 Query: 145 TREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALAL 204 R +L T+ SRC++ + A + RE++ ++ AL + G+P A+ Sbjct: 158 ARSSSAVLPTIVSRCQVVAFRTLTDAVAKAAIMREISATEQEARIAL-AATGTPSRAVEF 216 Query: 205 FQGDNWQ-ARETLCQALAYSVPSGDWYSLLAA 235 Q + R L + + W L++A Sbjct: 217 LQSSTRKNIRRQLIDVFGNLLRNDSWDVLISA 248 >UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A300_NATTJ Length = 589 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 100/227 (44%), Gaps = 14/227 (6%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA 80 R HA L G G ++ ++ L C Q ++ CG C C GT D + Sbjct: 35 SRISHAYLFSGPRGTGKTSVAKVFAKALNCDHSQDNEPCGQCSRCIEHDRGTFMDILEID 94 Query: 81 PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETW 140 + G+D +RE+ + + G KV V + +LT A NALLKTLEEPP Sbjct: 95 AASNR---GIDEIREIRDHVAYSPSEGNYKVYIVDEVHMLTTEAFNALLKTLEEPPDYVI 151 Query: 141 FFLATREPERLLATLRSRC-RLHY----LAPPPEQYAVTWLSREVTMSQDALLAALRLSA 195 F LAT EP +L T+ SRC R + + +Q S+ ++ ++++L + S Sbjct: 152 FILATTEPHKLPMTVLSRCQRFDFYRLSTSKIEKQLQNVIDSKNLSATKESLSIIAKKSD 211 Query: 196 GSPGAALAL------FQGDNWQARETLCQALAYSVPSGDWYSLLAAL 236 G AL+L F G Q + + +V +Y LL AL Sbjct: 212 GGMRDALSLLDQSLSFLGSGEQLKVDHVLEVTGTVSEDTFYDLLMAL 258 >UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=2 Tax=Psychrobacter RepID=A5WFF8_PSYWF Length = 751 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/316 (28%), Positives = 133/316 (42%), Gaps = 33/316 (10%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L+ + R HHA L G+G + LS+ L C+ CG C C + G Sbjct: 30 LINAIDHNRLHHAYLFTGTRGVGKTTIARILSKCLNCETGVTSTPCGVCSSCVAIDQGRF 89 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + + V+ RE+ + + G KV + + +L+ + NALLKTLE Sbjct: 90 IDLIEI---DAASRTKVEDTRELIDNVPYAPTQGRYKVYLIDEVHMLSTHSFNALLKTLE 146 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQ----YAVTWLSRE-VTMSQDALL 188 EPPA F LAT +P++L T+ SRC L P P+Q + L++E + +Q AL Sbjct: 147 EPPAHVKFLLATTDPQKLPITIISRCLQFVLRPLPQQALSDHIANLLTQENIDFTQPALW 206 Query: 189 AALRLSAGSPGAALALFQ-----GDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAP- 242 + GS AL+L G ET+ L + S D SLL + AP Sbjct: 207 QLANAAKGSVRDALSLTDQAIAFGQGRLTDETVNDMLGL-IDSADLISLLLDIYQGNAPA 265 Query: 243 --ARLHWLATLLMDALKRHHGAAQV------------TNVDVPGLVAE----LANHLSPS 284 A + + L+DA G A + +++V L A+ LA + P Sbjct: 266 LSAHIEQMRAQLVDAGSMFDGLADLLHQIAMVQLLPNVSLNVNDLQAQQITALAAQIGPD 325 Query: 285 RLQAILGDVCHIREQL 300 LQ V REQ+ Sbjct: 326 VLQLYYQIVIQGREQI 341 >UniRef50_C5C8W4 DNA polymerase III, delta' subunit n=4 Tax=Micrococcaceae RepID=C5C8W4_MICLC Length = 396 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 98/219 (44%), Gaps = 4/219 (1%) Query: 20 AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGHCRGCQLMQAGTHPDYYT 78 A R HA + PG G A + L C+ + CG C C+ + GTHPD Sbjct: 28 ADRPTHAWMFTGPPGSGRSTAARAFAAALQCEVADPAARGCGECHACRTVLGGTHPDVTV 87 Query: 79 LAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAE 138 LA E + ++ VR + E G ++ + DA +T+ A N LLK +EEPPA Sbjct: 88 LATEA--VSYRIEDVRALVEAGQSTPATGRWRIFLMEDADRMTERATNVLLKAIEEPPAR 145 Query: 139 TWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSP 198 T + L T P +L T+RSRCRL L+ P + L R + ++ L R+S Sbjct: 146 TIWMLCTPSPADVLPTVRSRCRLITLSIPAVEQVAELLHRRDGLDRETALTTARISQSHV 205 Query: 199 GAALALFQG-DNWQARETLCQALAYSVPSGDWYSLLAAL 236 G A L + + + RE + + D +L A L Sbjct: 206 GMARRLARDPEALERRERILSLPLQATAVSDAMALAATL 244 >UniRef50_A6DD60 DNA polymerase III subunits gamma and tau n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DD60_9PROT Length = 487 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 19/215 (8%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L+ S + R +A L L G G S+ L C++ C C C+L H Sbjct: 25 LINSLNSNRIANAYLFSGLRGSGKTTTARIFSKALQCEKGISSSPCEECESCKLANENRH 84 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + + ++ +RE+ E + K+ + + +LT+ A NALLKTLE Sbjct: 85 IDIIEMDAASNR---KIEDIRELIEHTKYKPSISRFKIFIIDEVHMLTNEAFNALLKTLE 141 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR-----EVTMSQDALL 188 EPP F +AT +P +L AT+ SR + PE+ ++L + V +AL Sbjct: 142 EPPEYVKFIMATTDPLKLPATILSRVQHFRFNKIPEKEIESFLQKVLIKENVKFEDEALR 201 Query: 189 AALRLSAGSPGAALALFQGDNWQARETLCQALAYS 223 ++ + GS +L L L QA+AYS Sbjct: 202 LIVKSAKGSVRDSLTL-----------LDQAIAYS 225 >UniRef50_Q67JB2 DNA polymerase III delta' subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67JB2_SYMTH Length = 332 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 120/295 (40%), Gaps = 21/295 (7%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG--THPDYYT 78 GR HA L G+G + L+R L C +P+ ++CG CR C + A HPD Sbjct: 23 GRVAHAYLFAGPAGVGKRLVALELARSLNCLEPRAGEACGACRSCLKLSAEPPVHPDVTV 82 Query: 79 LAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAE 138 + PE + + +R+V ++ G KVV + A + + N LLK LEEPP Sbjct: 83 VEPEG--RMIRTEQMRQVQNEVYARPTEGRYKVVIIDGAERMNAESGNRLLKVLEEPPPY 140 Query: 139 TWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSP 198 F L T +L T+ SRC++ + +P P + L + + LS GS Sbjct: 141 ACFVLLTTNAAGVLPTIVSRCQIVHFSPLPAEAIAAVLQEKAGIGPGEARLFASLSGGSV 200 Query: 199 GAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPA----------RLHWL 248 GAALA+ R +L + D LL EQA A RL Sbjct: 201 GAALAMAANPEVGRRRDEALSLLLRLGEMDDADLL-----EQAAAWEKEKDHLEERLEMA 255 Query: 249 ATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 A L DAL R V N D V LA L A L + R+ L+ Sbjct: 256 AFWLRDALLVAREAPERLVVNADRLPEVRTLAGRYGGEGLVAALESLSRARDALL 310 >UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYL7_9GAMM Length = 697 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 17/255 (6%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L+ + R HHA L G+G + L++ L C+ + CG C CQ + +G Sbjct: 27 LINAIHNQRLHHAYLFTGTRGVGKTTIARILAKCLNCETGVTSEPCGVCGVCQSIDSGRF 86 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + + V+ RE+ + + G KV + + +L+ + NALLKTLE Sbjct: 87 IDLIEI---DAASRTKVEDTRELLDNVPYAPTQGRYKVYLIDEVHMLSTHSFNALLKTLE 143 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE----QYAVTWLSRE-VTMSQDALL 188 EPPA F LAT +P++L T+ SRC L P P+ +Y T L++E ++ DAL Sbjct: 144 EPPAHVKFLLATTDPQKLPITIISRCLQFVLRPLPQVALAEYLGTILNKEQISYESDALW 203 Query: 189 AALRLSAGSPGAALALFQ-----GDNWQARETLCQALAYSVPSGDWYSLLAAL---NHEQ 240 + GS AL+L G+ E + Q L + D ++LA + N +Q Sbjct: 204 QLSSSAKGSVRDALSLTDQAIAFGNGNVTDEVIRQMLGL-IDQADVIAILANIYQQNTQQ 262 Query: 241 APARLHWLATLLMDA 255 + L ++DA Sbjct: 263 LTQSIQLLREQVVDA 277 >UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V121_9FIRM Length = 615 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 10/168 (5%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 RW P D L + +G+ HA L G G + L+R L C + Sbjct: 9 RWRPERFADLVGQEHISRTLSRAVTSGQISHAYLFTGPRGTGKTSTAKILARALNCAEGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CGHC C+ + G+ D + + + G+D +R++ E + G K+ + Sbjct: 69 TLTPCGHCDSCRSISDGSSMDVFEI---DAASNRGIDEIRDLRESVKFAPTEGLYKIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLH 162 + +LT A NALLKTLEEPP F LAT EP ++ AT++SRC+ + Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPERVIFILATTEPHKVPATIQSRCQRY 173 >UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N205_9FIRM Length = 640 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 85/281 (30%), Positives = 125/281 (44%), Gaps = 34/281 (12%) Query: 19 QAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYT 78 + R HA L G G + L++ L C + C C C+ + G HPD Sbjct: 33 KENRISHAYLFAGPRGTGKTTVAKLLAKALNCTGE--NPPCDQCPNCKAITVGEHPDVIE 90 Query: 79 LAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAA-LLTDAAANALLKTLEEPPA 137 + GVD VR++ +K+ ++A + G V++ D +++ A NALLKTLEEPPA Sbjct: 91 IDAASNN---GVDEVRDLIDKV-KYAPINGKYKVYIIDEVHMMSTGAFNALLKTLEEPPA 146 Query: 138 ETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGS 197 F LAT EP ++L T+ SRC+ + E + + V S++ LSA Sbjct: 147 HIVFVLATTEPHKILPTIISRCQ-RFDFKKVENHDIISRLEYVLKSEN---KKYELSALE 202 Query: 198 PGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLATLL-MDAL 256 A LA +G A L Q LAY N+E ++ + LL MD Sbjct: 203 SVAKLA--EGGMRDALSILEQCLAY--------------NNELTVESVNMVYGLLSMD-- 244 Query: 257 KRHHGAAQVTNVDVPGLVAELANHLSPS----RLQAILGDV 293 + Q+ + D+ G++ L N LS S RL L DV Sbjct: 245 NKISFIKQLLSKDIKGVLTSLDNMLSGSIDIKRLTFDLVDV 285 >UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB01_KANKD Length = 773 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 23/235 (9%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGHCRGCQLMQAGT 72 LV + ++GR HHA L G+G + LS+ L C+ K CG C C + G Sbjct: 28 LVNAIESGRLHHAYLFTGTRGVGKTTIARILSKCLNCETNGLTSKPCGECGSCVEIDEGR 87 Query: 73 HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTL 132 D + + VD RE+ E + G KV + + +L++++ NALLKTL Sbjct: 88 FVDLIEV---DAASRTKVDDTRELLENVQYKPTRGRYKVYLIDEVHMLSNSSFNALLKTL 144 Query: 133 EEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REVTMSQDAL 187 EEPP F LAT +P++L T+ SRC +L EQ L+ + AL Sbjct: 145 EEPPEHVIFLLATTDPQKLPVTVLSRCLQFHLKHMEEQTISKHLAYILQQESIDFETPAL 204 Query: 188 LAALRLSAGSPGAALALFQGDNWQARETLCQALAY---SVPSGDWYSLLAALNHE 239 R + GS AL+L L QA+A+ V D ++L ++H+ Sbjct: 205 ELISRSAEGSMRDALSL-----------LDQAIAFGQGKVQEEDIRTMLGTIDHQ 248 >UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=15 Tax=Betaproteobacteria RepID=Q1LLG8_RALME Length = 795 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 87/290 (30%), Positives = 125/290 (43%), Gaps = 46/290 (15%) Query: 2 RWYPWLRPDFEKLVASYQAGRG----------HHALLIQALPGMGDDALIYALSRYLLCQ 51 +W P DF LV R HHA L G+G L L++ L C Sbjct: 9 KWRPR---DFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAKALNCT 65 Query: 52 QPQGH-----KSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARL 106 P G+ + CG C+ C + +G DY + + GVD + ++ +K Sbjct: 66 GPDGNGGITAQPCGQCKACTEIDSGRFVDYIEM---DAASNRGVDEMAQLLDKAIYAPTA 122 Query: 107 GGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAP 166 G KV + + +LT+ A NA+LKTLEEPP F LAT +P+++ T+ SRC L Sbjct: 123 GRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQ 182 Query: 167 PPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALF-QGDNWQARETLC---QALAY 222 P + V+ L D +LA +S G+AL L Q + R+ L QA+AY Sbjct: 183 MPPGHIVSHL--------DHILAQEGISHD--GSALRLLAQAAHGSMRDALSLTDQAIAY 232 Query: 223 S---VPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 S V +L A++ +L LL DAL GA + D Sbjct: 233 SAGQVSEEAVRGMLGAIDQS-------YLVQLL-DALAAEDGATMLGIAD 274 >UniRef50_Q1YNM8 DNA polymerase III, delta prime subunit domain protein, putative n=2 Tax=Aurantimonadaceae RepID=Q1YNM8_MOBAS Length = 352 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 85/269 (31%), Positives = 126/269 (46%), Gaps = 30/269 (11%) Query: 8 RPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC-------QQPQGHKSCG 60 R +F +L ++ AGR HHA L Q G+G +A +R+LL + P + Sbjct: 31 RREFAELASAEAAGRLHHAWLFQGPRGVGKATTAFAFARHLLSPAYAKGTEPPVFDPADP 90 Query: 61 HCRGCQLMQAGTHPD--YYTLAP-EKG---KNTLGVDAVREVTEKLNEHARLGGAKVVW- 113 R L GT+P + T P EKG + + V+ VR KLN + G++ W Sbjct: 91 AMRQIAL---GTYPGLVHVTRPPVEKGTGFRTQITVEGVR----KLNRFFQATGSRTSWR 143 Query: 114 ---VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQ 170 + A + +AANALLK LEEPPA + F + P RLL T+RSRCR P + Sbjct: 144 IAIIDPADDMNRSAANALLKILEEPPARSVFLIMNHTPGRLLPTIRSRCRTLRFEPLGDH 203 Query: 171 YAVTWLSREV-TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 + + + +D + AAL LS GS A++L + R++L +A P DW Sbjct: 204 DLAAATAAALPSAGKDEIAAALPLSEGSARQAISLIAYGGIEIRQSLQTLIAADRP--DW 261 Query: 230 ---YSLLAALNHEQAPARLHWLATLLMDA 255 +S+ AL + +L T L+ A Sbjct: 262 NSIHSMADALTQKGREQAYEFLITALLSA 290 >UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR83_9FIRM Length = 638 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 9/217 (4%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 ++ +++ R HA L G G ++ L++ + C + C C C+ + G Sbjct: 28 ILRAFEQNRLAHAYLFSGPRGTGKTSMARILAKAVNCLDLKNGNPCNECANCKSINTGAS 87 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D Y + G + GVD +R + E + G KV + + +LT A NALLKTLE Sbjct: 88 MDVYEI---DGASARGVDEIRVLRESVRTLPVAGNKKVYIIDEVHMLTKEAFNALLKTLE 144 Query: 134 EPPAETWFFLATREPERLLATLRSRCR---LHYLAPPPEQYAVTWLSREVTMS---QDAL 187 EPPA F LAT EP ++ T+ SRC+ H ++ + + +S+E +S + A Sbjct: 145 EPPAHVLFILATTEPAKIPLTILSRCQRYEFHRISVNDIKEHLLHISQESHLSLTPEAAA 204 Query: 188 LAALRLSAGSPGAALALFQGDNWQARETLCQALAYSV 224 L A+R G A L Q A L + Y + Sbjct: 205 LIAVRAEGGLRDALSLLDQCSGASAGNELSAEIVYDL 241 >UniRef50_B4UA58 DNA polymerase III, subunits gamma and tau n=3 Tax=Aquificaceae RepID=B4UA58_HYDS0 Length = 421 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 3/155 (1%) Query: 24 HHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEK 83 HHA + G G ++ L C PQ + C C CQ ++ GT D + Sbjct: 38 HHAYIFAGHKGTGKTTTARIFAKVLNCLNPQEGEPCNACPNCQAIEKGTFVDLIEMDAAS 97 Query: 84 GKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFL 143 + G+D +R V E + G KV + +A +LT A NALLKT+EEPP F L Sbjct: 98 NR---GIDEIRAVREGASYLPMQGKYKVYIIDEAHMLTKEAFNALLKTIEEPPPSLIFIL 154 Query: 144 ATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR 178 T E +++L T++SRC+ + ++ T+L R Sbjct: 155 CTTEFDKILPTIQSRCQKLVFSRASKENIKTYLRR 189 >UniRef50_C6PER6 DNA polymerase III, delta prime subunit n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PER6_CLOTS Length = 320 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 20/318 (6%) Query: 11 FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQA 70 F K+V+S + +A L G G + + + + C+ G K C C C M + Sbjct: 14 FNKIVSSQKIA---NAYLFIGESGFGKEFMAKYFAMMINCKN--GSKPCLSCPSCIQMIS 68 Query: 71 GTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA--KVVWVTDAALLTDAAANAL 128 G HPD + + P+ ++ V+ +R V N + + + K+ + +A +T+ A N++ Sbjct: 69 GNHPDIFFIEPDGI--SIKVETLRNVVIN-NAYVKPYNSYKKIFIIKEAEKMTEQAQNSI 125 Query: 129 LKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALL 188 LKTLEEPP F L + + E LL T+ SRC + ++ +L E + + Sbjct: 126 LKTLEEPPEYGLFILTSSKMEGLLPTIVSRCEIIRFTRESDEVIEDYLINEKKIDRSKAK 185 Query: 189 AALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAAL-----NHEQAPA 243 ++ G+ G A L + R L L Y+V + D L + N E Sbjct: 186 KIASIANGNYGKANLLIDEGYSRIRSELGDIL-YNVINQDKALRLESFKFFDENREMIDD 244 Query: 244 RLHWLATLLMD--ALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 + + + L D LK + N D+ + + +++L+ +L I+ ++ + L Sbjct: 245 IIDIMFSYLRDLMILKLLGSEEYIINKDMVDKLKDFSDNLTGFKLNNIINEIGELAFNLK 304 Query: 302 SVTGINRELLITDLLLRI 319 S +N +L I LL I Sbjct: 305 S--NVNYQLAIEKFLLNI 320 >UniRef50_C8NXE7 DNA polymerase III, delta' subunit n=2 Tax=Corynebacterium RepID=C8NXE7_9CORY Length = 439 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 100/217 (46%), Gaps = 8/217 (3%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 H+ L PG G A + L+C+ P CGHC+ C+ + AG H D + PE Sbjct: 51 HSWLFTGPPGAGRSTAAVAFAAALVCESPADALGCGHCQACRDVFAGAHTDVVHIVPE-- 108 Query: 85 KNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFL 143 T+ +D VR+ + + +V+ + DA + A A+LKT+EEPP T + Sbjct: 109 GMTISIDTVRDTIIPAATRLPTVANWRVIIIEDADRFSREAPEAILKTVEEPPETTVIIM 168 Query: 144 A--TREPERLLATLRSRCRLHYL-APPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGA 200 + +P+ TLRSRCR Y+ AP ++ +S E DA LAA+ S G Sbjct: 169 CAPSTDPQDFSVTLRSRCRHLYVPAPSVDEIVRILVSEEGAAEPDARLAAV-TSLRHIGR 227 Query: 201 ALALFQGDNWQARETLCQALAYSVPSGDW-YSLLAAL 236 A L D Q R +A V GD + +AAL Sbjct: 228 ARRLVNSDASQKRRAAAINIAELVFHGDQAFQGVAAL 264 >UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1Z8_ERYRH Length = 600 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 17/249 (6%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L S + HA L G G ++ +R + C+ P CG C C + GTH Sbjct: 28 LKNSITKNKISHAYLFCGPRGTGKTSIAKLFARAVNCENP-DQVICGTCDNCLAVADGTH 86 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + GVD +R + EK+ LG KV + + +L+ A NALLKTLE Sbjct: 87 PDLIEIDAASNN---GVDEIRGLIEKVKYTPILGKYKVYIIDEVHMLSQGAFNALLKTLE 143 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE-------QYAVTWLSREVTMSQDA 186 EPP+ F LAT E ++L T+ SRC+ + E Y + + E Sbjct: 144 EPPSHVVFILATTEIHKVLPTIISRCQRYDFNRIGEVDIAKRLDYVLNNENVEAEQGVSK 203 Query: 187 LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS----VPSGDWYSLLAALNHEQAP 242 L+A+ LS G AL + + A + + Y + D +L ++ +Q Sbjct: 204 LIAS--LSGGGLRNALTILEQAIVLADDQITVNQIYDTNGIITDQDKINLFDSIREQQME 261 Query: 243 ARLHWLATL 251 A ++ +A + Sbjct: 262 ALVNQIAMM 270 >UniRef50_C9M8I9 DNA polymerase III gamma and tau subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8I9_9BACT Length = 648 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 6/157 (3%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 + S +GR HA L G G + L++ + C G + CG C+ C ++ G Sbjct: 27 ITRSLSSGRIGHAYLFSGPRGCGKTTVARLLAKAVNCTARNGAEPCGQCQSCLAIRDGRS 86 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + G + VD VRE+ + + G KV + + +L+ +A NALLKTLE Sbjct: 87 LDVVEI---DGASNNTVDEVRELKANVGLASFGGNWKVYIIDEVHMLSASAFNALLKTLE 143 Query: 134 EPPAETWFFLATREPERLLATLRSRCR---LHYLAPP 167 EPP F LAT EP ++ AT+RSRC+ H L+ P Sbjct: 144 EPPERVMFILATTEPHKVPATIRSRCQHIPFHGLSVP 180 >UniRef50_Q73FH7 DNA polymerase III, delta prime subunit n=68 Tax=Bacillus RepID=Q73FH7_BACC1 Length = 327 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 102/213 (47%), Gaps = 12/213 (5%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L+ S R HA L++ G G A +++ LC Q G + C C C+ + +G H Sbjct: 19 LMNSIAKERISHAYLLEGGKGTGKFATAIQMAKSFLCSQRNGVEPCHVCTNCKRIDSGNH 78 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 P+ + + P+ ++ + ++ E+ ++ KV + A +T AAN LLK LE Sbjct: 79 PNLHIVKPDGL--SIKKQQIHDLQEEFSKTGLEANKKVYVIEHADRMTANAANTLLKFLE 136 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSRE-VTMSQDALLAALR 192 EP ++T L T + ++L T+ SRC++ P P + + L E VT S L A L Sbjct: 137 EPSSDTTAILLTEQSHQILNTILSRCQVVTFRPLPTESLIRRLQDEGVTTSLSTLAAQL- 195 Query: 193 LSAGSPGAALALFQGDNW--QARE---TLCQAL 220 S ALAL D W QAR LC+AL Sbjct: 196 --TNSFDEALALC-SDEWFAQARALVIKLCEAL 225 >UniRef50_Q30Q97 DNA polymerase III, tau subunit n=4 Tax=Epsilonproteobacteria RepID=Q30Q97_SULDN Length = 543 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 4/144 (2%) Query: 20 AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTL 79 A R HA L L G G + S+ L+C++ HK CG C+ C L H D + Sbjct: 36 ANRLSHAYLFSGLRGSGKTSTARIFSKALICEKGISHKPCGVCQNCILALENRHIDIVEM 95 Query: 80 APEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAET 139 G ++ +D +R++ E+ K+ + + +LT A NALLKTLEEPP+ Sbjct: 96 ---DGASSRKIDDIRDLIEQTKYKPATARFKIFIIDEVHMLTKEAFNALLKTLEEPPSYV 152 Query: 140 WFFLATREPERLLATLRSRCRLHY 163 F LAT +P +L AT+ SR + H+ Sbjct: 153 KFILATTDPLKLPATILSRTQ-HF 175 >UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE33_ACHLI Length = 564 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 8/208 (3%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA + G G ++ +++ L C + + CG C C + G PD + + Sbjct: 39 HAYIFSGPRGTGKTSVAKIVAKALNCLEAPAKEPCGKCDVCLGVDRGDVPDIIEI--DAA 96 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 N GVD +R++ +K+ +G KV + + +LT AA NALLKTLEEPP F LA Sbjct: 97 SNN-GVDEIRDLRDKVKYAPSIGKYKVYIIDEVHMLTTAAFNALLKTLEEPPKYVVFILA 155 Query: 145 TREPERLLATLRSRC-RLHYLAPPPEQYAVTW---LSRE-VTMSQDALLAALRLSAGSPG 199 T EP ++ AT+ SRC R + +Q +++E + ++ +AL A R + G Sbjct: 156 TTEPHKVPATILSRCQRFDFKNIEMDQIEENLKQIINKENLKITPEALTAIARTAEGGMR 215 Query: 200 AALALFQGDNWQARETLCQALAYSVPSG 227 AL+L + + + Y+V G Sbjct: 216 DALSLLDQVVSFTNDEITEEDIYTVSGG 243 >UniRef50_C7MGG0 DNA polymerase III, gamma/tau subunit n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MGG0_BRAFD Length = 394 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 81/178 (45%), Gaps = 5/178 (2%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 A L+ PG G A + L C+Q G CG CR C+ A THPD +A +K Sbjct: 44 QAWLVTGPPGSGRSTAARAFAATLQCEQGTG---CGQCRACRTTLANTHPDVTVVATDK- 99 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 ++ + VR + G +VV + DA ++ N LLK++EEPP T + L Sbjct: 100 -LSIAKEEVRALVMTAQRAPATGNRRVVIIEDADRMSAGTFNVLLKSIEEPPPATVWMLC 158 Query: 145 TREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAAL 202 E L T+RSRCRL LA P L R + + + A R + G G AL Sbjct: 159 APSAEDLAPTIRSRCRLVTLAVPSSAVVADLLRRRDGIDEQLAVRAARAAQGHIGLAL 216 >UniRef50_C7ND36 DNA polymerase III, subunits gamma and tau n=3 Tax=Leptotrichia RepID=C7ND36_LEPBD Length = 524 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 10/197 (5%) Query: 17 SYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG--HKSCGHCRGCQLMQAGTHP 74 S + + HA L G+G + +++ + C + CG C C+ + G Sbjct: 30 SLRENKLSHAYLFTGPRGVGKTTIARLIAKGVNCLNSENVTDNPCGECENCREISQGISM 89 Query: 75 DYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEE 134 D + + G+D +RE+ EK+N G K+ + + +LT A NALLKTLEE Sbjct: 90 DMIEIDAASNR---GIDEIRELKEKINYQPVKGRKKIYIIDEVHMLTKEAFNALLKTLEE 146 Query: 135 PPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALLA 189 PP+ F LAT E +++ T+ SRC+ + P ++ L ++T+ + +L Sbjct: 147 PPSHVIFILATTEIDKIPDTVISRCQRYDFLPIDKKDIKKLLKNVAEKEKITIDEASLDL 206 Query: 190 ALRLSAGSPGAALALFQ 206 R S GS + ++F+ Sbjct: 207 IYRKSEGSARDSFSIFE 223 >UniRef50_B6IMK3 ATPase i n=1 Tax=Rhodospirillum centenum SW RepID=B6IMK3_RHOCS Length = 372 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 99/212 (46%), Gaps = 21/212 (9%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSC-------------- 59 L+ S+ +GR HHA LI PG+G L + ++R++L Q G+ + Sbjct: 30 LLESWTSGRMHHAWLIGGPPGIGKATLAFRMARFVLKQGTGGNDAALFGAPPPPVTLAVD 89 Query: 60 GHCRGCQLMQAGTHPDYYTL------APEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + + AG H D T+ ++ K L VD VR + L + GG +VV Sbjct: 90 TEHPVARRIAAGGHADLLTVQRTWDEKRKRFKRDLPVDEVRRIAPFLRLTSAEGGWRVVV 149 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 V A + + NALLK LEEPPA + +A LL T+RSR R L P PE V Sbjct: 150 VDGADQMNLSGQNALLKILEEPPARSLILMAADNVGSLLPTIRSRSRKLMLEPLPEATVV 209 Query: 174 TWLSREV-TMSQDALLAALRLSAGSPGAALAL 204 L R + ++A A RL+ GS G AL L Sbjct: 210 GLLGRYAPELDREAQTALARLAEGSIGRALDL 241 >UniRef50_A9HZ16 DNA polymerase III subunit Tau n=6 Tax=Bordetella RepID=A9HZ16_BORPD Length = 736 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 95/205 (46%), Gaps = 15/205 (7%) Query: 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 R HHA L G+G L L++ L C+ K CG CR C + AG DY L Sbjct: 63 RLHHAWLFTGTRGVGKTTLSRILAKSLNCETGITSKPCGQCRACTEIDAGRFVDYLEL-- 120 Query: 82 EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWF 141 + GV+ + ++ E+ G KV + + +LT A NA+LKTLEEPP F Sbjct: 121 -DAASNRGVEEMTQLLEQAVYAPGAGRYKVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKF 179 Query: 142 FLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDAL---LAALRLSAGSP 198 LAT +P+++ T+ SRC L P V L + + +A+ L ALRL A + Sbjct: 180 ILATTDPQKIPVTVLSRCLQFNLKQMPPDAIVGHL--QAVLGDEAVACELPALRLIAQAA 237 Query: 199 GAALALFQGDNWQARETLCQALAYS 223 G G A QA+AYS Sbjct: 238 G-------GSMRDALSLTDQAIAYS 255 >UniRef50_Q11HZ8 DNA polymerase III, delta prime subunit n=4 Tax=cellular organisms RepID=Q11HZ8_MESSB Length = 354 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 81/165 (49%), Gaps = 12/165 (7%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-----PQGHKSCG-HCRGCQL 67 L ++Y+AG+ HHALL PG+G L + L+ +L P + + +L Sbjct: 35 LASAYRAGKLHHALLFAGRPGIGKATLAFHLAHHLFTNPDHRLGPLDFSDIDTNSQDFRL 94 Query: 68 MQAGTHPDYYTLA------PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 G HP L +K K + VD +R V L+ GG +VV V A + Sbjct: 95 AAQGAHPGVLHLTRPFVERDKKFKTVITVDEIRRVARFLSLTPPDGGYRVVIVDPADDMN 154 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAP 166 AANALLK LEEPP T F L T RLL T+RSRC+++ L P Sbjct: 155 ANAANALLKNLEEPPPRTIFILITHSFGRLLPTIRSRCQVYKLDP 199 >UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragment) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CH16_9PLAN Length = 484 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 8/199 (4%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L + + R HA L G+G ++ L++ L C Q CG C CQ + G Sbjct: 31 QALQNAIRGDRVAHAYLFTGARGVGKTSMARILAKALNCPHTQDGIPCGECEVCQNIAVG 90 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 + D + G + G+D +R + +N + K+ + + +LT A NALLKT Sbjct: 91 SDVDVLEI---DGASNRGIDDIRSLRANVNVRSMRSKYKIYIIDEVHMLTKEAFNALLKT 147 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR-----EVTMSQDA 186 LEEPP F T EP +L T+ SRC+ E L + +V+++ DA Sbjct: 148 LEEPPPNVKFIFCTTEPNKLPDTILSRCQRFDFGYIEENSICDRLKQIAEAEQVSVADDA 207 Query: 187 LLAALRLSAGSPGAALALF 205 + R + GS + ++F Sbjct: 208 IQLVARRAGGSMRDSQSIF 226 >UniRef50_B1L8C0 DNA polymerase III, subunits gamma and tau n=6 Tax=Thermotogaceae RepID=B1L8C0_THESQ Length = 478 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 74/310 (23%), Positives = 130/310 (41%), Gaps = 31/310 (10%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 ++ + Q H + G G L L++ L C+ +G + C CR C+ + GT Sbjct: 26 IIGAIQKNSVAHGYIFAGPRGTGKTTLARILAKSLNCENRKGVEPCNSCRACREIDEGTF 85 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D L + G+D +R + + + G KV + + +LT A NALLKTLE Sbjct: 86 MDVIELDAASNR---GIDEIRRIRDAVGYRPMEGKYKVYIIDEVHMLTKEAFNALLKTLE 142 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALL 188 EPP+ F LAT E++ T+ SRC++ P++ L + + + ++AL Sbjct: 143 EPPSHVVFVLATTNLEKVPPTIISRCQVFEFRNIPDELIEKRLQEVAEAEGIEIDREALS 202 Query: 189 AALRLSAGSPGAALALFQGDNWQAR------ETLCQALAY-----------SVPSGDWYS 231 + ++G AL + + W+ ET+ +AL ++ SGD Sbjct: 203 FIAKRASGGLRDALTMLE-QVWKFSEGKIDLETVHRALGLIPIQVVRDYVNAIFSGDVKR 261 Query: 232 LLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRL 286 + L+ + + L++ L+R G QV+ D+ + +L N L + Sbjct: 262 VFTVLDDVYYSGKDYEVLIQEAVEDLVEDLERERGVYQVSANDIVQVSRQLLNLLREIKF 321 Query: 287 QAILGDVCHI 296 VC + Sbjct: 322 AEEKRLVCKV 331 >UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD9 Length = 600 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 10/187 (5%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA L G G + L++ + C K CG C C+ ++ GTHPD + + Sbjct: 41 HAYLFCGPRGTGKTTVAKLLAKAVNC--TGNPKPCGECENCKQIENGTHPD--VIEIDAA 96 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 N GV+ VR + +K+ G KV + + +++ A NALLKTLEEPPA F LA Sbjct: 97 SNN-GVEEVRSLIDKVKYAPTQGQYKVYIIDEVHMMSPGAFNALLKTLEEPPAHVIFILA 155 Query: 145 TREPERLLATLRSRCRLHYLAPPPEQYAVT----WLSREVTMSQDALLAAL-RLSAGSPG 199 T EP ++L T+ SRC+ +Q V L E D L + RL+ G Sbjct: 156 TTEPHKILPTIISRCQRFDFTRLTDQEMVQRMQYVLKEEGKTYDDGSLELIARLANGGMR 215 Query: 200 AALALFQ 206 AL++ + Sbjct: 216 DALSILE 222 >UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJV5_9BACT Length = 533 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 3/157 (1%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 E L ++ R HA L G+G +L L++ L C C C C + AG Sbjct: 26 EILQSAIATNRIAHAYLFTGPRGVGKTSLARILAKSLNCVNGPTTTPCNACSNCLEITAG 85 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 T PD + G + VD +RE+ +L A K+ + + +L+ A NALLKT Sbjct: 86 TSPDVIEI---DGASNTSVDDIRELQRELLYPASSSNYKIYIIDEVHMLSKNAFNALLKT 142 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPP 168 LEEPP F AT EP+++L T+ SRC+ + P Sbjct: 143 LEEPPDNVIFIFATTEPQKVLPTIISRCQRYDFKRIP 179 >UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q0VNM5_ALCBS Length = 615 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 76/241 (31%), Positives = 112/241 (46%), Gaps = 16/241 (6%) Query: 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 R HHA L G+G + LSR L C+Q + CG C CQ + G D + Sbjct: 36 RLHHAYLFTGTRGVGKTTIARILSRCLNCEQGVSARPCGVCPTCQEITDGRFVDLIEV-- 93 Query: 82 EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWF 141 + V+ RE+ + + G KV + + +L+ + NALLKTLEEPP F Sbjct: 94 -DAASRTKVEDTRELLDNVQYAPTRGRYKVYLIDEVHMLSAHSFNALLKTLEEPPPHVKF 152 Query: 142 FLATREPERLLATLRSRC-RLHYLAPPPEQYA---VTWLSRE-VTMSQDALLAALRLSAG 196 LAT +P++L T+ SRC + A P EQ A T L +E + + ALL+ + + G Sbjct: 153 LLATTDPQKLPVTVLSRCLQFSLKALPAEQIAGHLKTLLDKEMIRYDEPALLSLGKAAEG 212 Query: 197 SPGAALAL------FQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLAT 250 S AL+L F G+ Q A+ +V +LL AL ++ L LA+ Sbjct: 213 SMRDALSLTDQAIAFGGE--QLSSEAVNAMLGTVDRNHVLTLLVALAEQEPGGVLQALAS 270 Query: 251 L 251 + Sbjct: 271 V 271 >UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4U2_9GAMM Length = 635 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 110/239 (46%), Gaps = 12/239 (5%) Query: 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 R HHA L G+G + LSR L C+Q + CG C CQ + G D + Sbjct: 36 RLHHAYLFTGTRGVGKTTIARILSRCLNCEQGVSARPCGVCPTCQEITDGRFVDLIEV-- 93 Query: 82 EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWF 141 + V+ RE+ + + G KV + + +L+ + NALLKTLEEPP F Sbjct: 94 -DAASRTKVEDTRELLDNVQYAPTRGRYKVYLIDEVHMLSAHSFNALLKTLEEPPPHVKF 152 Query: 142 FLATREPERLLATLRSRC-RLHYLAPPPEQYA---VTWLSRE-VTMSQDALLAALRLSAG 196 LAT +P++L T+ SRC + A P EQ A T L +E + + ALL+ + + G Sbjct: 153 LLATTDPQKLPVTVLSRCLQFSLKALPAEQIAGHLKTLLDKEMIRYEEPALLSLGKAAQG 212 Query: 197 SPGAALAL----FQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLATL 251 S AL+L + Q A+ +V +LL AL ++ L LAT+ Sbjct: 213 SMRDALSLTDQAIAFGSEQLSSEAVNAMLGTVDRNHVLTLLVALAEQEPGGVLQALATV 271 >UniRef50_C0ET70 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ET70_9FIRM Length = 340 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 5/204 (2%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH---KSCGHCRGCQLM 68 E + + + HA +++ G G L A S+ L C+ + +SCG C C M Sbjct: 15 EHFITAVHHKKISHAYIMEGDKGSGKKMLAEAFSKILQCEGRETTGLVESCGKCESCIQM 74 Query: 69 QAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAA-NA 127 + HPD ++ EK N + V +RE E G +++ D A +AAA NA Sbjct: 75 EYHDHPDVIWVSHEKP-NVISVGEIREQIVNTVEIMPYKGPYKIYIVDEAEKMNAAAQNA 133 Query: 128 LLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDAL 187 +LKT+EEPP FL T L T+ SRC L P P +L + ++S++ Sbjct: 134 ILKTIEEPPEYAVIFLLTTNRGAFLDTILSRCILLATRPVPGTAVEKYLVEKCSVSKEEA 193 Query: 188 LAALRLSAGSPGAALALFQGDNWQ 211 A S G+ G A A+ + +Q Sbjct: 194 EFAAGFSLGNIGKAEAIISSEEFQ 217 >UniRef50_B8FKB9 DNA-directed DNA polymerase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FKB9_DESAA Length = 330 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 85/309 (27%), Positives = 135/309 (43%), Gaps = 21/309 (6%) Query: 25 HALLIQALPGMGDD--ALIYALSRYLLCQQPQGHKS--------CGHCRGCQLMQAGTHP 74 HAL+ G+G A+ +A++R C+ +S CG C C+ + +G HP Sbjct: 25 HALVFTGDAGLGKRQAAVHFAMARN--CEGTPDPESAMFGSQGPCGVCGSCRKILSGNHP 82 Query: 75 DYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEE 134 D L EK ++ ++ +R++ L G +VV ++ A +T +++NALLK LEE Sbjct: 83 D--VLFVEKRGASIKIEQIRDLLSVLAMRPSEGKTRVVLISGAGDMTASSSNALLKALEE 140 Query: 135 PPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLS 194 P T F L + LL T+ SRC+ +P P + + L + + D A ++ Sbjct: 141 PSDTTCFVLLAGQKSELLPTVVSRCQEIRFSPLPVSFLIESLEND-GVDPDLAHACAFIA 199 Query: 195 AGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLL----AALNHEQAPARLHWLAT 250 +GS A AL R L L G +LL A + A L+W+ T Sbjct: 200 SGSLDKARALASDQGLARRNWLVNQLCALEDQGMGQALLLAEFLAKDKNAAQEDLNWIRT 259 Query: 251 LLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINREL 310 L D L + +V N D+ GLV + +P L L V L +N L Sbjct: 260 WLRDLLVSRYAPQRVINRDLMGLVNSRSAKTAPEVLLEKLQAVADCENDL--TRNVNTRL 317 Query: 311 LITDLLLRI 319 + +L +R+ Sbjct: 318 SMENLCMRL 326 >UniRef50_B6BKU4 DNA polymerase III gamma and tau subunits DnaX n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKU4_9PROT Length = 585 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 19/209 (9%) Query: 20 AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTL 79 + R HA L L G G + ++ L+C+Q H+ CG C+ C+L H D + Sbjct: 36 SNRLSHAYLFSGLRGSGKTSTARIFAKALICEQGMSHEPCGVCQNCKLAVENRHMDIVEM 95 Query: 80 APEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAET 139 ++ +D +R++ E+ K+ + + +LT A NALLKTLEEPPA Sbjct: 96 ---DAASSRKIDDIRDLIEQTKYRPASARFKIFIIDEVHMLTKEAFNALLKTLEEPPAYV 152 Query: 140 WFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REVTMSQDALLAALRLS 194 F LAT +P +L AT+ SR + + + L+ E+ DAL R Sbjct: 153 KFILATTDPLKLPATILSRTQHFRFKSIATKKIIDHLAHILNLEEIKYETDALEILARSG 212 Query: 195 AGSPGAALALFQGDNWQARETLCQALAYS 223 GS L L L QA+ YS Sbjct: 213 NGSLRDTLTL-----------LDQAIIYS 230 >UniRef50_B8FY25 DNA-directed DNA polymerase n=2 Tax=Desulfitobacterium hafniense RepID=B8FY25_DESHD Length = 282 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 9/243 (3%) Query: 19 QAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYT 78 Q GR H LL G ++R + C Q CGHC C+ + +G HPD Sbjct: 13 QEGRLAHLLLFHGGSGPERRKAGLEIARRINCTSGQD-APCGHCPSCKKILSGNHPDVEV 71 Query: 79 LAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAE 138 + P K ++G++ + + E++ G KV + +A LT AANALLK +EEPP Sbjct: 72 VKP--AKASIGIEQILDWQERVYRKHYEGNYKVFILEEADKLTIPAANALLKVIEEPPER 129 Query: 139 TWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-SREVTMSQDALLAALRLSAGS 197 T L+ + E LL T++SR + Y P + WL S E ++ A RLS+ + Sbjct: 130 TLIVLSAQNAEVLLPTIQSRAQAVYF---PFRGEEEWLKSLEESLDPWEAREAFRLSSHN 186 Query: 198 PGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALK 257 P A + + +E + + +V GD+ L E+ A L +L L + + Sbjct: 187 PELAYEILTLGVEKVKEWI-RGFEQAVEEGDFLKLFPLFPVEKKEAEL-YLHILALGIAQ 244 Query: 258 RHH 260 +H Sbjct: 245 KHQ 247 >UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Tax=Bacteria RepID=B4RU47_ALTMD Length = 930 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 12/163 (7%) Query: 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 R HHA L G+G + S+ L C++ QG CG C C+ ++ G + D + Sbjct: 36 RLHHAYLFTGTRGVGKTTIARIFSKSLNCEEGQGANPCGQCNTCKEIEQGNYVDLLEI-- 93 Query: 82 EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWF 141 + V+ RE+ + + G KV + + +L+ + NALLKTLEEPP F Sbjct: 94 -DAASRTKVEDTRELLDNVQYKPTRGRYKVYLIDEVHMLSKHSFNALLKTLEEPPPHVKF 152 Query: 142 FLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 LAT +P++L T+ SRC Q+ + +SRE + Q Sbjct: 153 LLATTDPQKLPITILSRCL---------QFNLKAMSREQIVGQ 186 >UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31I98_THICR Length = 696 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 82/283 (28%), Positives = 122/283 (43%), Gaps = 24/283 (8%) Query: 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTL-A 80 R HHA L G+G + S+ L C+Q K CG C C+ + G D + A Sbjct: 36 RLHHAYLFTGTRGVGKTTIARIFSKALNCEQGITSKPCGVCSTCRSIDEGRFVDLIEVDA 95 Query: 81 PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETW 140 K K V+ RE+ E + G KV + + +L+ ++ NALLKTLEEPP Sbjct: 96 ASKTK----VEDTRELLENVQYAPVQGRYKVYLIDEVHMLSKSSFNALLKTLEEPPEHVK 151 Query: 141 FFLATREPERLLATLRSRC---RLHYLAPPPEQYAVTWL--SREVTMSQDALLAALRLSA 195 F LAT +P +L T+ SRC L L P Q + ++ +VT + AL + + Sbjct: 152 FLLATTDPHKLPITVLSRCLQFNLMRLTLPQIQQHLAYILQQEQVTFEETALAMIAKSAD 211 Query: 196 GSPGAALALFQGDNWQARETLCQALAY---SVPSGDWYSLLAALNHEQAPARLHWLATLL 252 GS +L++ L QA+AY V ++L ++ + L LA Sbjct: 212 GSARDSLSI-----------LDQAIAYGGGKVQYDAVQAMLGLVDQQFTLNILSALANES 260 Query: 253 MDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCH 295 D LK + VD L +L L + +LGD+ Sbjct: 261 ADELKEVIQQLALMGVDYTALNGQLIEALHQMSMLQVLGDLTE 303 >UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C4ZNJ5_THASP Length = 716 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 106/235 (45%), Gaps = 14/235 (5%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA 80 GR HHA L G+G + L++ L C+ + CG C C+ + A PDY + Sbjct: 35 GRLHHAWLFTGTRGVGKTTISRILAKALNCETGITAEPCGICDACRAIDADRFPDYVEM- 93 Query: 81 PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETW 140 + GV+ + + +K G KV + + +LT A NA+LKTLEEPP Sbjct: 94 --DAASNRGVEEMAALLDKAVYAPVQGRFKVYMIDEVHMLTGHAFNAMLKTLEEPPEHVK 151 Query: 141 FFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR-----EVTMSQDALLAALRLSA 195 F LAT +P+++ T+ SRC L P+ + V L+R EV AL + ++ Sbjct: 152 FILATTDPQKIPVTVLSRCLQFNLKQMPQGHIVDHLTRILQAEEVAFEPGALRHLAKAAS 211 Query: 196 GSPGAALALFQ-----GDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARL 245 GS AL+L G E + L +V Y++L AL PA L Sbjct: 212 GSMRDALSLLDQAIAHGAGRVEEEQVSHMLG-TVGDDHLYAVLDALAAGDVPALL 265 >UniRef50_A9INK7 DNA polymerase III, delta' subunit n=11 Tax=Burkholderiales RepID=A9INK7_BORPD Length = 368 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 79/186 (42%), Gaps = 28/186 (15%) Query: 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 R HA L+ + G+G A + LLC+ P+ H +CG C C + +G HPD + P Sbjct: 40 RFAHAWLVHGVAGIGKLQFASAAAASLLCESPRDHLACGQCPACAWVASGNHPDLRRIRP 99 Query: 82 E----------------------------KGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 E + +D +R + N GG +V Sbjct: 100 EAIALQEGAEAAEGAEEAEPAGGGAAAKRAPSKEIRIDQIRTLESWFNTATHRGGWRVAL 159 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + A L +ANALLK LEEPP T F L P+RLL TL SRCR L P A+ Sbjct: 160 LYPAHALNAISANALLKVLEEPPPHTVFLLVADAPDRLLPTLVSRCRRLPLPAPEAAQAL 219 Query: 174 TWLSRE 179 WL + Sbjct: 220 QWLQEQ 225 >UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKH0_FIBSS Length = 575 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 10/166 (6%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + Q GR HHA L G+G L+R L C+ Sbjct: 9 KWRPQSFSDMVGQEHIAKTLENAIQGGRLHHAFLFTGTRGVGKTTSARILARTLNCKGSD 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D Y + + NT VD +R+V E++ +G K+ + Sbjct: 69 PLHPCGECDSCKDIAGGNPMDVYEI--DAASNT-SVDNIRDVIERVQYPPVIGKYKIFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR 160 + +L+ A NALLKTLEEPPA F AT E ++ T+ SR + Sbjct: 126 DEVHMLSTGAFNALLKTLEEPPAHVIFIFATTEVNKVPQTILSRVQ 171 >UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHA0_BREBN Length = 565 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA 80 R HA L G G + +++ + C+QP + C C C+ + G+ D + Sbjct: 35 NRLSHAYLFNGPRGTGKTSAAKIMAKAVNCEQPIDGEPCNQCDTCRAISNGSVTDVLEID 94 Query: 81 PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETW 140 + GV+ +R++ +K+ KV + + +LT A NALLKTLEEPP+ Sbjct: 95 AASNR---GVEEIRDIRDKVKFAPSDVRYKVYIIDEVHMLTTEAFNALLKTLEEPPSHVI 151 Query: 141 FFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR-----EVTMSQDALLAALRLSA 195 F LAT EP +L AT+ SRC+ P + V L R V + + AL +++ Sbjct: 152 FILATTEPHKLPATIISRCQRFDFHRIPLRVMVDLLQRICQSQGVQVEEQALQLVAKMAE 211 Query: 196 GSPGAALALFQGDNWQARETLCQALAYS 223 G AL+L L QA++YS Sbjct: 212 GGARDALSL-----------LDQAISYS 228 >UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y5_9GAMM Length = 569 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 111/258 (43%), Gaps = 30/258 (11%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L+ R HHA L G+G L ++ L C+Q CG C+ C + +G Sbjct: 28 LINGLDQNRLHHAFLFSGTRGVGKTTLARIFAKSLNCEQGVSSTPCGVCQSCTEVDSGRF 87 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + + VD RE+ + + G KV + + +L+ ++ NALLKTLE Sbjct: 88 VDLIEV---DAASRTKVDDTRELLDNVQYAPSQGRYKVYLIDEVHMLSTSSFNALLKTLE 144 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDAL--LAAL 191 EPP F AT +P++L T+ SRC Q+ + L E+T D L L Sbjct: 145 EPPPHVKFLFATTDPQKLPVTILSRCL---------QFNLRRL--ELTQISDHLRYLLEQ 193 Query: 192 RLSAGSPGAALALFQGDNWQARETLC---QALAY---SVPSGDWYSLLAALNHEQAPARL 245 P A L + + R+ L QA+A+ V S + +L +++ +Q Sbjct: 194 ETIKAEPEALEQLARAADGSMRDALSLLDQAIAFGGGEVTSESVFQMLGSISQDQ----- 248 Query: 246 HWLATLLMDALKRHHGAA 263 L++DAL + G A Sbjct: 249 ---LILILDALLKQDGKA 263 >UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Tax=Symbiobacterium thermophilum RepID=Q67TJ5_SYMTH Length = 570 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 3/140 (2%) Query: 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA 80 GR HHA L+ G G + L++ + C PQ + C C C+ + +G D + Sbjct: 35 GRLHHAYLLSGPRGTGKTTVARILAKAVNCLNPQDGEPCNECEACRRITSGEALDLIEI- 93 Query: 81 PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETW 140 + G+D +R++ +K+N KV + + +LT+ A NALLKTLEEPPA Sbjct: 94 --DAASNRGIDEIRDLRDKVNFAPVELKYKVYIIDEVHMLTEPAFNALLKTLEEPPAHVL 151 Query: 141 FFLATREPERLLATLRSRCR 160 F LAT E ++L T+ SRC+ Sbjct: 152 FVLATTEKQKLPITILSRCQ 171 >UniRef50_B0B7Q2 DNA polymerase III subunit gamma/tau n=15 Tax=Chlamydiaceae RepID=B0B7Q2_CHLT2 Length = 466 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP-QGHKSCGHCRGCQLMQAGT 72 L S + R HA + + G G L ++ L CQ P Q + C C C+ + GT Sbjct: 29 LKNSLRLNRAAHAYIFSGIRGTGKTTLARVFAKALNCQNPTQDQEPCNQCAICKEISLGT 88 Query: 73 HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTL 132 D + G + G++ +R++ E + K+ + + +LT A N+LLKTL Sbjct: 89 SMDVIEI---DGASHRGIEDIRQINETVLFVPSKSRYKIYIIDEVHMLTKEAFNSLLKTL 145 Query: 133 EEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS----REVT-MSQDAL 187 EEPPA FFLAT E ++ T+ SRC+ L E+ + L+ +E T S++AL Sbjct: 146 EEPPAHVKFFLATTEIAKIPNTISSRCQKMLLKRISEETIIDKLATIAKQEGTETSREAL 205 Query: 188 LAALRLSAGSPGAALALF 205 L + + GS A +L+ Sbjct: 206 LPIAKAAQGSLRDAESLY 223 >UniRef50_Q1WSU8 DNA polymerase III, delta' subunit n=2 Tax=Lactobacillus salivarius RepID=Q1WSU8_LACS1 Length = 330 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 5/156 (3%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 P+L F KL+ + + HA L+ G G L +++ + C Q C C Sbjct: 10 PFLTKHFAKLI---RENKLVHAYLLSGAEGTGKIELAKWIAKGIFCLNSQNGVPCLKCSE 66 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C ++ HPD T+ P+ ++ V+ +R + + N+ KV + DA ++ A Sbjct: 67 CNRIENNNHPDVVTIMPDGL--SIKVEQIRYLKSEFNKSGVESDRKVFIIQDAQKMSIGA 124 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCR 160 AN+LLK LEEP FL T EP++LL T+ SRC+ Sbjct: 125 ANSLLKFLEEPSGNITAFLLTSEPQKLLPTIISRCQ 160 >UniRef50_C7GZE0 DNA polymerase III, subunit gamma and tau n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZE0_9FIRM Length = 473 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 24/222 (10%) Query: 3 WYPWLRPD-FEKLVAS----------YQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ 51 Y RP+ F++++ +AG HA L+ + G G L +++ + C Sbjct: 8 LYTRFRPNTFDEVIGQENIIKVFLNQLKAGSVSHAYLLCGIRGTGKTTLARLMAKAVNCL 67 Query: 52 QPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKV 111 PQ K CG C C+ + +H D + GVD VRE+ + + + KV Sbjct: 68 DPQ-KKPCGACENCRSITEESHMDVIEIDAASNN---GVDDVRELIDTVAYPPSVAEKKV 123 Query: 112 VWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQY 171 + + +L+ A NALLKTLEEPP+ F AT +P ++ T+ SRC L E Sbjct: 124 YIIDEVHMLSQGAFNALLKTLEEPPSHVIFIFATTDPNKIPKTILSRCMRFDLRRITESD 183 Query: 172 AVTWL-------SREVTMSQDALLAALRLSAGSPGAALALFQ 206 V L SRE+ +DAL + GS AL++ + Sbjct: 184 LVKRLGFVCESCSREI--EEDALKLIAVNAEGSLRDALSILE 223 >UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 Tax=Proteobacteria RepID=A3NA70_BURP6 Length = 826 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 100/229 (43%), Gaps = 21/229 (9%) Query: 6 WLRPDFEKLVA----------SYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W DF LV + GR HHA L G+G L ++ L C+ Sbjct: 10 WRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAKALNCETGVT 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + CG CR C+ + G DY + + GVD + + E+ KV + Sbjct: 70 SQPCGVCRACREIDEGRFVDYVEM---DAASNRGVDEMAALLERAVYAPVDARFKVYMID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT+ A NA+LKTLEEPP F LAT +P+++ T+ SRC L P + V+ Sbjct: 127 EVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPAGHIVSH 186 Query: 176 LSREVTMSQDALLA-ALRLSAGSPGAALALFQGDNWQARETLCQALAYS 223 L R + + A ALRL A + QG A QA+AYS Sbjct: 187 LERILGEERIAFEPQALRLLARA-------AQGSMRDALSLTDQAIAYS 228 >UniRef50_B1VI07 DNA polymerase III, delta' subunit n=2 Tax=Actinomycetales RepID=B1VI07_CORU7 Length = 448 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 9/150 (6%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 H+ L PG G A + L+C P G CG C CQ GTHPD +A Sbjct: 58 HSWLFTGPPGSGRSIAAKAFATGLVC--PNG--GCGECEQCQSAATGTHPDIVWIATTG- 112 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 + + V+ VREV + +VV V DA L +A +NALLK++EEPPA T F L Sbjct: 113 -SVIPVEDVREVISSAASMPTVSRWRVVVVEDADRLNEAGSNALLKSVEEPPAHTVFVLC 171 Query: 145 --TREPERLLATLRSRCRLHYL-APPPEQY 171 + +P + TLRSRCR Y+ P P+Q Sbjct: 172 APSTDPLDISITLRSRCRHVYIPTPSPQQV 201 >UniRef50_Q8NTJ5 ATPase involved in DNA replication n=8 Tax=Corynebacterium RepID=Q8NTJ5_CORGL Length = 419 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 73/154 (47%), Gaps = 5/154 (3%) Query: 33 PGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDA 92 PG G + L+C P CG C C+ G+HPD + P++ ++GVDA Sbjct: 66 PGSGRSVAAKVFAATLVCSNPD-VVGCGQCEDCRAAMGGSHPDIEHIVPQQ--LSIGVDA 122 Query: 93 VREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA--TREPER 150 REV + G +VV +A LT AANALLKT+EEP T L T +P Sbjct: 123 AREVIKAAAVSPVAGNWRVVIFENADRLTMQAANALLKTVEEPTESTVMILCAPTTDPRD 182 Query: 151 LLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 + TLRSRCR Y+ P L E +SQ Sbjct: 183 IAITLRSRCRHLYIPTPSIAEVARILVAEGNVSQ 216 >UniRef50_Q2STA6 DNA polymerase III gamma-tau subunits n=3 Tax=Mycoplasma mycoides group RepID=Q2STA6_MYCCT Length = 669 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 12/202 (5%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 E L + R +HALL G G ++ ++ + C G K+C C C+L Sbjct: 28 EILEKQIKDNRINHALLFSGQRGTGKTSVARIFAKTVNCLNLTGSKACEQCNNCKLANEN 87 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 D + GVD +RE+ ++ KV + + +LT A NALLKT Sbjct: 88 QLIDIIEIDAASNN---GVDEIREIKNSVSTLPINSKYKVYIIDEVHMLTKQAFNALLKT 144 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE-------QYAVTWLSREVTMSQ 184 LEEPP T F LAT E ++ T+ SRC++ + QY V + ++ + Sbjct: 145 LEEPPVYTIFILATTEFNKIPQTILSRCQIFNFTKIDKNSLKNRLQYIVNQENYQI--EK 202 Query: 185 DALLAALRLSAGSPGAALALFQ 206 + L LS GS A+ + + Sbjct: 203 EVLDEIFYLSEGSLRDAINILE 224 >UniRef50_C0WUL6 DNA polymerase III subunit delta' n=3 Tax=Lactobacillus RepID=C0WUL6_LACBU Length = 336 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 21/322 (6%) Query: 11 FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQA 70 FE+ + HA L G G +A+ ++ L C + CG C C + Sbjct: 17 FEQFMRLVDRNELSHAYLFTGEDGAGQNAVAMGVAMRLFCTNVKDGYPCGKCAECTRIMN 76 Query: 71 GTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLK 130 HPD P+ ++ VD +R V + + A G KV ++DA +T AAN+LLK Sbjct: 77 HDHPDVVITKPDGL--SIKVDQIRHVKSEFTKSAMEGSKKVFIISDADKMTTGAANSLLK 134 Query: 131 TLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM-SQDALLA 189 +EEP FL ++ +L T+ SR ++ + L + + SQ LL Sbjct: 135 FIEEPTGNVVSFLISQNRNLILPTIVSRTQVVEFPSIGKDVMNQELRKSGILPSQINLL- 193 Query: 190 ALRLSAGSPGAALALFQGDNWQA--RETLCQALAYSVPSGDW---YSLLAAL----NHEQ 240 +S + + + +Q DNW + +E + + Y V Y +A + N E+ Sbjct: 194 ---MSMTNSLSEIKRWQADNWFSSLQEVVSKWFGYLVKGNLMAMPYIQMALMPLITNKER 250 Query: 241 APARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAEL---ANHLSPSRLQAILGDVCHIR 297 L + + + L+ +G + P +++E A S +L +L ++ + R Sbjct: 251 QQVALSMMIGVFDETLEIKYGTLKKDTTKFPDIISETKQAAQEWSSDQLMTMLEELLNTR 310 Query: 298 EQLMSVTGINRELLITDLLLRI 319 LM +N + +I + L++ Sbjct: 311 GSLM--VNVNFQNVIESVTLKM 330 >UniRef50_Q0APP2 DNA polymerase III, delta prime subunit n=1 Tax=Maricaulis maris MCS10 RepID=Q0APP2_MARMM Length = 349 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 11/205 (5%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK----SCGHCRGCQLMQ 69 ++ +GR HHA +I G+G +L + +R +L +P + C++++ Sbjct: 34 FATAWDSGRLHHAWMITGPRGVGKASLAWRAARRVLGARPMPEAGPLGTSAEDPVCKVIE 93 Query: 70 AGTHPDYYTL------APEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 A PD L ++ + + V+ R + GG +V V A + + Sbjct: 94 AQATPDLLVLRRPWDDKRKRWRGEITVEEARRAPHFFEMSSGGGGWRVCIVDCADDMNNN 153 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANALLKTLEEPP + FL T P RL AT+RSRCR L P WL + + Sbjct: 154 AANALLKTLEEPPKQGVLFLVTHTPGRLPATIRSRCRRLALRAPDIDATAEWLEQTGGAA 213 Query: 184 QDALLAAL-RLSAGSPGAALALFQG 207 A RL+ G+PG ALAL G Sbjct: 214 DTGAAMAASRLAGGAPGRALALIAG 238 >UniRef50_C3JWH0 DNA polymerase III subunit delta n=3 Tax=Corynebacterineae RepID=C3JWH0_RHOER Length = 405 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 84/183 (45%), Gaps = 7/183 (3%) Query: 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 HA L PG G + L C G CG C C GTH D + P+ Sbjct: 38 HAWLFTGPPGSGRSVAALCFAAALQCTS-DGAPGCGECHACTTTMGGTHGDVRRIIPDG- 95 Query: 85 KNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLA 144 ++ V +RE+ + G +V+ V DA LT+ AANALLK +EEPP T L Sbjct: 96 -LSISVKGMREIVNIASRRPTTGRWQVIVVEDADRLTEGAANALLKVVEEPPDRTVILLC 154 Query: 145 --TREPERLLATLRSRCR-LHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAA 201 T +PE + TLRSRCR + + P E A + R+ + A +AA +S G G A Sbjct: 155 APTTDPEDMSVTLRSRCRHMPLVTPSVESIAQVLIDRDGLDPERARIAA-SISGGHVGRA 213 Query: 202 LAL 204 L Sbjct: 214 RRL 216 >UniRef50_Q1NDV9 DNA polymerase III delta prime subunit n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NDV9_9SPHN Length = 322 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 93/186 (50%), Gaps = 8/186 (4%) Query: 66 QLMQAGTHPDYYTLAP-EKGKNT---LGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 +L++A HPDY LAP EK T + VD VR + + L ++V V A L Sbjct: 72 RLIEATAHPDYAELAPIEKDGVTARNISVDQVRGLQRLIQSAPSLSPRRIVVVDSADDLE 131 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR-LHYLAPPPEQYAVTWLSREV 180 AANALLKTLEEPP++ F L + P RLL T+RSRCR L + A + + Sbjct: 132 RGAANALLKTLEEPPSDMLFLLVSHAPGRLLPTIRSRCRTLRFDALNDAAMRRVLIEAQP 191 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWY--SLLAALNH 238 +S + A + GSPG A+ F G N ET LA G+ +L+ AL+ Sbjct: 192 GLSDVEMTALVHAGEGSPGQAM-RFAGLNLAEIETALGELATGADEGNSKRLALVKALSA 250 Query: 239 EQAPAR 244 + A AR Sbjct: 251 KSAKAR 256 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C9Y1I8 DNA polymerase III subunit delta' n=2 Tax=Cronob... 377 e-103 UniRef50_O69170 DNA polymerase III subunit delta' n=152 Tax=Ente... 364 3e-99 UniRef50_Q2NU34 DNA polymerase III delta prime subunit n=2 Tax=G... 340 3e-92 UniRef50_C0B0Z4 Putative uncharacterized protein n=2 Tax=Enterob... 317 3e-85 UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymera... 307 5e-82 UniRef50_Q1N4U3 DNA polymerase III subunit delta n=1 Tax=Bermane... 305 1e-81 UniRef50_B8F7F9 DNA polymerase III subunit delta n=9 Tax=Pasteur... 305 1e-81 UniRef50_Q3JAL5 DNA polymerase III, delta prime subunit n=2 Tax=... 303 5e-81 UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 303 6e-81 UniRef50_A4J0K7 DNA polymerase III, delta prime subunit n=1 Tax=... 303 6e-81 UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=C... 303 7e-81 UniRef50_A6VYC4 DNA polymerase III, subunits gamma and tau n=1 T... 301 2e-80 UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau sub... 301 3e-80 UniRef50_D0IB97 DNA polymerase III delta prime subunit n=7 Tax=V... 300 3e-80 UniRef50_Q0VQM5 DNA polymerase III, delta prime subunit n=2 Tax=... 300 4e-80 UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 T... 300 4e-80 UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydroba... 300 6e-80 UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Ta... 299 9e-80 UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, puta... 298 2e-79 UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymera... 298 2e-79 UniRef50_A6FHN9 HolB n=1 Tax=Moritella sp. PE36 RepID=A6FHN9_9GAMM 298 2e-79 UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 T... 297 3e-79 UniRef50_Q1QAW7 DNA polymerase III, gamma subunit / DNA polymera... 297 3e-79 UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 T... 297 4e-79 UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 T... 297 4e-79 UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Ta... 297 4e-79 UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicr... 297 5e-79 UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 T... 296 5e-79 UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymera... 296 6e-79 UniRef50_D0WGG2 DNA polymerase III, subunit gamma and tau n=1 Ta... 296 7e-79 UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 T... 295 1e-78 UniRef50_A5D691 DNA polymerase III, gamma/tau subunits n=1 Tax=P... 295 2e-78 UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 T... 295 2e-78 UniRef50_B1L8C0 DNA polymerase III, subunits gamma and tau n=6 T... 294 2e-78 UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax... 294 3e-78 UniRef50_P43748 DNA polymerase III subunit delta' n=23 Tax=Paste... 294 3e-78 UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Ta... 294 3e-78 UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 T... 294 3e-78 UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Sl... 293 5e-78 UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Ta... 293 5e-78 UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Ha... 293 5e-78 UniRef50_A3DH83 DNA polymerase III, delta prime subunit n=3 Tax=... 293 7e-78 UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseria... 293 7e-78 UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdema... 292 1e-77 UniRef50_B9L692 DNA polymerase III, subunits gamma and tau n=1 T... 292 1e-77 UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 T... 292 1e-77 UniRef50_C5BU66 DNA polymerase III subunit delta prime n=1 Tax=T... 292 1e-77 UniRef50_P52024 DNA polymerase III subunit delta' n=22 Tax=Pseud... 292 1e-77 UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 T... 292 2e-77 UniRef50_B5FFM6 DNA polymerase III subunit tau n=2 Tax=Vibrio fi... 292 2e-77 UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Co... 292 2e-77 UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 ... 291 2e-77 UniRef50_A3YHQ6 DNA polymerase III subunits gamma and tau n=1 Ta... 291 2e-77 UniRef50_C4GC81 Putative uncharacterized protein n=1 Tax=Shuttle... 291 2e-77 UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 ... 291 2e-77 UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacte... 291 2e-77 UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteri... 291 2e-77 UniRef50_C5S6L9 DNA polymerase III, delta prime subunit n=1 Tax=... 291 2e-77 UniRef50_A5F6P8 DNA polymerase III, delta prime subunit n=35 Tax... 291 2e-77 UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella a... 291 3e-77 UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 T... 290 3e-77 UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D... 290 3e-77 UniRef50_B0MFK9 Putative uncharacterized protein n=2 Tax=Clostri... 290 3e-77 UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 290 3e-77 UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase... 290 3e-77 UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 T... 290 4e-77 UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 T... 290 4e-77 UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 T... 290 5e-77 UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 T... 290 6e-77 UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 ... 289 8e-77 UniRef50_B3PHI9 DNA polymerase III, delta prime subunit n=1 Tax=... 289 8e-77 UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 289 8e-77 UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, puta... 289 9e-77 UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 T... 289 1e-76 UniRef50_Q0A8H8 DNA polymerase III, tau subunit / DNA polymerase... 289 1e-76 UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 T... 288 2e-76 UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W... 288 2e-76 UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 T... 287 3e-76 UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 T... 287 3e-76 UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Ta... 287 3e-76 UniRef50_A7K5T9 DNA polymerase III delta prime subunit n=12 Tax=... 287 3e-76 UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 T... 287 4e-76 UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 T... 287 4e-76 UniRef50_A0KKI0 DNA polymerase III, delta' subunit n=2 Tax=Aerom... 287 4e-76 UniRef50_Q13Z80 DNA-directed DNA polymerase n=48 Tax=Burkholderi... 287 4e-76 UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Ta... 287 5e-76 UniRef50_A9NBZ0 DNA polymerase III, delta' subunit n=6 Tax=Coxie... 287 5e-76 UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase... 287 5e-76 UniRef50_Q47HW9 AAA ATPase, central region n=3 Tax=Betaproteobac... 286 7e-76 UniRef50_A1SX03 DNA polymerase III, tau subunit / DNA polymerase... 286 8e-76 UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 T... 286 9e-76 UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, puta... 286 9e-76 UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 T... 285 1e-75 UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 T... 285 1e-75 UniRef50_A5G697 DNA polymerase III, delta prime subunit n=7 Tax=... 285 1e-75 UniRef50_Q7MIV2 DNA polymerase III, subunits gamma and tau n=41 ... 285 1e-75 UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcu... 285 1e-75 UniRef50_Q3A3X2 DNA polymerase III, delta prime subunit n=2 Tax=... 285 1e-75 UniRef50_A9D7T4 DNA polymerase III, gamma and tau subunits n=2 T... 285 1e-75 UniRef50_C6APV7 DNA polymerase III subunit delta' n=1 Tax=Aggreg... 285 2e-75 UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 285 2e-75 UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 T... 284 2e-75 UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Ta... 284 2e-75 UniRef50_A4C5P9 Putative DnaX, DNA polymerase III, gamma/tau sub... 284 3e-75 UniRef50_B1ZQU6 DNA polymerase III, subunits gamma and tau n=3 T... 284 3e-75 UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 T... 284 3e-75 UniRef50_Q1ATA7 DNA polymerase III, subunits gamma and tau n=1 T... 284 3e-75 UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Ta... 284 3e-75 UniRef50_UPI0001BC30A0 DNA polymerase III, delta prime subunit n... 284 3e-75 UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenel... 284 3e-75 UniRef50_P43746 DNA polymerase III subunit gamma/tau n=23 Tax=Pa... 284 4e-75 UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus Rep... 284 4e-75 UniRef50_A0L8F3 DNA polymerase III, gamma subunit / DNA polymera... 284 4e-75 UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 T... 284 4e-75 UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=ce... 284 4e-75 UniRef50_A9A090 DNA polymerase III, delta prime subunit n=1 Tax=... 284 4e-75 UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=roo... 284 5e-75 UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma ... 283 5e-75 UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 T... 283 5e-75 UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1... 283 5e-75 UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lys... 283 5e-75 UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostri... 283 5e-75 UniRef50_Q2SIR6 DNA polymerase III delta prime subunit n=1 Tax=H... 283 6e-75 UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 283 6e-75 UniRef50_Q606M1 DNA polymerase III, delta prime subunit n=1 Tax=... 283 7e-75 UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 T... 283 7e-75 UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Ta... 283 8e-75 UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 T... 282 8e-75 UniRef50_B5FG33 DNA polymerase III, delta' subunit n=3 Tax=Aliiv... 282 9e-75 UniRef50_A6GQQ4 AAA ATPase, central region n=1 Tax=Limnobacter s... 282 9e-75 UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Ta... 282 1e-74 UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clo... 282 1e-74 UniRef50_A0YC05 DNA polymerase III subunits gamma and tau n=1 Ta... 282 1e-74 UniRef50_A0L8T4 DNA polymerase III, delta prime subunit n=1 Tax=... 282 1e-74 UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Ta... 282 1e-74 UniRef50_C8W2Q8 DNA polymerase III, delta prime subunit n=1 Tax=... 282 1e-74 UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau... 282 2e-74 UniRef50_B7VL96 DNA polymerase III subunit tau n=11 Tax=Vibriona... 282 2e-74 UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Ta... 282 2e-74 UniRef50_A7BV86 DNA polymerase III, delta prime subunit n=1 Tax=... 281 2e-74 UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 T... 281 2e-74 UniRef50_B8KYG2 DNA polymerase III, gamma and tau subunit n=1 Ta... 281 2e-74 UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 T... 281 2e-74 UniRef50_Q8K9J2 DNA polymerase III subunit delta' n=4 Tax=Buchne... 281 2e-74 UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 T... 281 2e-74 UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=De... 281 2e-74 UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 T... 281 3e-74 UniRef50_C5AFH6 DNA polymerase III, subunits gamma and tau n=1 T... 280 3e-74 UniRef50_B5EJD9 DNA polymerase III, subunits gamma and tau n=3 T... 280 4e-74 UniRef50_B0MPA0 Putative uncharacterized protein n=1 Tax=Eubacte... 280 4e-74 UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Ta... 280 5e-74 UniRef50_P06710 DNA polymerase III subunit gamma n=112 Tax=Enter... 280 5e-74 UniRef50_A0YGP8 DNA polymerase III subunit delta n=1 Tax=marine ... 280 6e-74 UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Be... 280 6e-74 UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 T... 279 7e-74 UniRef50_Q67JB2 DNA polymerase III delta' subunit n=1 Tax=Symbio... 279 8e-74 UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, puta... 279 8e-74 UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Ta... 279 9e-74 UniRef50_C1CYE9 Putative DNA polymerase III, subunits gamma and ... 279 1e-73 UniRef50_A5EY35 DNA polymerase III, subunits gamma and tau n=1 T... 279 1e-73 UniRef50_Q21K67 DNA polymerase III, delta prime subunit n=1 Tax=... 279 1e-73 UniRef50_Q1QX48 DNA polymerase III, delta prime subunit n=1 Tax=... 279 1e-73 UniRef50_C4Z189 DNA polymerase n=20 Tax=Bacteria RepID=C4Z189_EUBE2 279 1e-73 UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA ... 278 2e-73 UniRef50_D0ZED4 DNA polymerase III, subunits gamma and tau n=2 T... 278 2e-73 UniRef50_Q47XQ9 DNA polymerase III, gamma/tau subunit n=1 Tax=Co... 278 2e-73 UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 T... 278 2e-73 UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymera... 278 2e-73 UniRef50_A6DD60 DNA polymerase III subunits gamma and tau n=1 Ta... 278 2e-73 UniRef50_A5FRM9 DNA polymerase III, subunits gamma and tau n=5 T... 278 2e-73 UniRef50_C8PKZ6 DNA polymerase III subunit tau n=1 Tax=Campyloba... 278 2e-73 UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 T... 278 2e-73 UniRef50_A6TJF9 DNA polymerase III, delta prime subunit n=2 Tax=... 278 2e-73 UniRef50_A6DLE8 DNA polymerase III, gamma and tau subunits n=1 T... 278 3e-73 UniRef50_Q1YTP5 DNA polymerase III, delta prime subunit n=1 Tax=... 277 3e-73 UniRef50_B0K122 DNA polymerase III, delta prime subunit n=10 Tax... 277 3e-73 UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 T... 277 3e-73 UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bac... 277 3e-73 UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 T... 277 4e-73 UniRef50_Q0B0W5 DNA-directed DNA polymerase n=1 Tax=Syntrophomon... 277 4e-73 UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 T... 277 5e-73 UniRef50_Q6FAW7 DNA polymerase III, tau and gamma subunits (DNA ... 276 6e-73 UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Ta... 276 7e-73 UniRef50_B4UA58 DNA polymerase III, subunits gamma and tau n=3 T... 276 7e-73 UniRef50_A6QBX8 DNA polymerase III, gamma/tau subunits n=1 Tax=S... 276 7e-73 UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 T... 276 8e-73 UniRef50_Q7VR24 DNA polymerase III, delta prime subunit n=2 Tax=... 276 9e-73 UniRef50_B9CMB1 DNA polymerase III subunit gamma/tau n=1 Tax=Ato... 275 1e-72 UniRef50_B8DQU3 DNA polymerase III, subunits gamma and tau n=2 T... 275 1e-72 UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 T... 275 1e-72 UniRef50_C9RAG1 DNA polymerase III, subunits gamma and tau n=1 T... 275 1e-72 UniRef50_C5S1I5 DNA polymerase III subunits gamma and tau n=2 Ta... 275 1e-72 UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=D... 275 2e-72 UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Ta... 275 2e-72 UniRef50_A5KMD2 Putative uncharacterized protein n=3 Tax=Clostri... 275 2e-72 UniRef50_C7GZE0 DNA polymerase III, subunit gamma and tau n=1 Ta... 274 2e-72 UniRef50_B2V5N0 DNA polymerase III, subunits gamma and tau n=4 T... 274 2e-72 UniRef50_A6LMU3 DNA polymerase III, subunits gamma and tau n=1 T... 274 2e-72 UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=P... 274 3e-72 UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 T... 274 3e-72 UniRef50_A9HZ16 DNA polymerase III subunit Tau n=6 Tax=Bordetell... 274 4e-72 UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 T... 274 4e-72 UniRef50_C2D9N9 DNA polymerase III gamma and tau subunits n=1 Ta... 274 5e-72 UniRef50_B1WS93 DNA polymerase III gamma and tau subunits n=6 Ta... 273 5e-72 UniRef50_C0GUE6 DNA polymerase III, subunits gamma and tau n=1 T... 273 5e-72 UniRef50_C4XU00 DNA polymerase III gamma and tau subunit n=2 Tax... 273 5e-72 UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 T... 273 5e-72 UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragm... 273 6e-72 UniRef50_Q2BG76 DNA polymerase III subunit delta n=1 Tax=Neptuni... 273 6e-72 UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2... 273 7e-72 UniRef50_B6BKU4 DNA polymerase III gamma and tau subunits DnaX n... 273 8e-72 UniRef50_C3XBH9 DNA polymerase III subunit gamma n=2 Tax=Oxaloba... 272 9e-72 UniRef50_Q2RZH6 DNA polymerase III, subunits gamma and tau, puta... 272 1e-71 UniRef50_B2A325 DNA-directed DNA polymerase n=1 Tax=Natranaerobi... 272 1e-71 UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 T... 272 1e-71 UniRef50_C7H4D6 DNA polymerase III, gamma/tau subunit n=3 Tax=Ru... 272 1e-71 UniRef50_C4L8D9 DNA polymerase III, delta prime subunit n=1 Tax=... 272 1e-71 UniRef50_A0LEK6 DNA polymerase III, delta prime subunit n=1 Tax=... 272 1e-71 UniRef50_B6BTP5 DNA polymerase subunits gamma and tau n=1 Tax=be... 272 1e-71 UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 T... 272 1e-71 UniRef50_C6NZM0 DNA polymerase III, delta prime subunit n=1 Tax=... 272 1e-71 UniRef50_UPI0001BC5C50 DNA polymerase III subunits gamma and tau... 272 2e-71 UniRef50_B5JVJ6 DNA polymerase III, delta prime subunit n=1 Tax=... 271 2e-71 UniRef50_B3HUU9 DNA polymerase III subunit delta' n=6 Tax=Entero... 271 2e-71 UniRef50_A4BMM6 DNA polymerase III, delta prime subunit n=1 Tax=... 271 2e-71 UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobac... 271 2e-71 UniRef50_D1AZL2 DNA polymerase III, subunits gamma and tau n=1 T... 271 2e-71 UniRef50_A3ZPF5 DNA polymerase III gamma and tau subunits n=1 Ta... 271 2e-71 Sequences not found previously or not previously below threshold: UniRef50_B6EJ42 DNA polymerase III subunit tau n=8 Tax=Vibrionac... 288 2e-76 UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 T... 285 2e-75 UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 T... 284 2e-75 UniRef50_C9PPQ1 DNA polymerase III subunit gamma/tau n=1 Tax=Pas... 284 3e-75 UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 T... 283 5e-75 UniRef50_C0CSD7 Putative uncharacterized protein n=2 Tax=Clostri... 282 1e-74 UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dic... 281 2e-74 UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and ta... 280 3e-74 UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Ba... 280 5e-74 UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Ba... 277 5e-73 UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=unc... 276 8e-73 UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 T... 275 1e-72 UniRef50_UPI00016C46EC DNA polymerase III gamma and tau subunits... 275 2e-72 UniRef50_UPI0001C37DC8 DNA polymerase III subunits gamma and tau... 275 2e-72 UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79... 274 2e-72 UniRef50_C4LG88 DNA polymerase III, gamma and tau subunit n=1 Ta... 273 6e-72 UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subuni... 273 8e-72 UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacill... 273 8e-72 UniRef50_A5VIC2 DNA polymerase III, subunits gamma and tau n=39 ... 272 1e-71 UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 T... 272 2e-71 UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bactero... 271 2e-71 UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clo... 271 2e-71 >UniRef50_C9Y1I8 DNA polymerase III subunit delta' n=2 Tax=Cronobacter RepID=C9Y1I8_CROTZ Length = 342 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 211/335 (62%), Positives = 254/335 (75%), Gaps = 1/335 (0%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M+WYPWLRP FE LV ++QAGRGHHA+LI ALPGMGDDALIYALSR+ +CQQPQG KSCG Sbjct: 8 MKWYPWLRPSFEHLVGNWQAGRGHHAVLIHALPGMGDDALIYALSRWRMCQQPQGQKSCG 67 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 CR CQLMQAGTHPDYY PEKGK+TLG+DA+R+++EKL + ARLGGAKVVW+ +AA L Sbjct: 68 ECRACQLMQAGTHPDYYQAEPEKGKSTLGIDAIRDISEKLYDRARLGGAKVVWIKEAAQL 127 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T+AAANALLKTLEEPP TWF L REPE+L ATLRSRC +LAPP +YA WL+RE+ Sbjct: 128 TEAAANALLKTLEEPPENTWFLLGCREPEQLPATLRSRCFSWHLAPPETRYAEAWLAREI 187 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ 240 + AALRL+ G+P AAL L Q + WQ R L + + ++ SGDW SLL ALNHEQ Sbjct: 188 QAEPSRINAALRLTGGAPAAALELLQPEQWQQRVALGEKITAALTSGDWLSLLPALNHEQ 247 Query: 241 APARLHWLATLLMDALKRHHGA-AQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 AP RLHWLA LMDALK HGA A + N D P LVA+LA SP+ QA+L + R++ Sbjct: 248 APFRLHWLAAFLMDALKWRHGAQAALVNTDYPVLVAQLAQRFSPAVTQAMLDSLFRCRDR 307 Query: 300 LMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL 334 L++V +NRELL+T+LLL E Y++P VLP HL Sbjct: 308 LLNVAAVNRELLLTELLLTWERYMRPDAVLPSYHL 342 >UniRef50_O69170 DNA polymerase III subunit delta' n=152 Tax=Enterobacteriaceae RepID=HOLB_YERPE Length = 340 Score = 364 bits (934), Expect = 3e-99, Method: Composition-based stats. Identities = 173/340 (50%), Positives = 221/340 (65%), Gaps = 6/340 (1%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M WYPWL + +LV + GRGHHALL+ +LPG G+DALIYALSR+L+CQQ QG KSCG Sbjct: 1 MNWYPWLNAPYRQLVGQHSTGRGHHALLLHSLPGNGEDALIYALSRWLMCQQRQGEKSCG 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C+LM AG HPD+Y L PEKGK+++GV+ VR++ +KL HA+ GGAKVVW+ A +L Sbjct: 61 ECHSCRLMLAGNHPDWYVLTPEKGKSSIGVELVRQLIDKLYSHAQQGGAKVVWLPHAEVL 120 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL---- 176 TDAAANALLKTLEEPP +T+F L +P LLATLRSRC YLA P + WL Sbjct: 121 TDAAANALLKTLEEPPEKTYFLLDCHQPASLLATLRSRCFYWYLACPDTAICLQWLNLQW 180 Query: 177 -SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAA 235 R++ + A+LAAL+LS G+P AA L Q + W R LC L ++ D SLL Sbjct: 181 RKRQIPVEPVAMLAALKLSEGAPLAAERLLQPERWSIRSALCSGLREALNRSDLLSLLPQ 240 Query: 236 LNHEQAPARLHWLATLLMDALKRHHGAAQV-TNVDVPGLVAELANHLSPSRLQAILGDVC 294 LNH+ A RL WL++LL+DALK GA + N D LV +LA+ + L + + Sbjct: 241 LNHDDAAERLQWLSSLLLDALKWQQGAGEFAVNQDQLPLVQQLAHIAATPVLLQLAKQLA 300 Query: 295 HIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL 334 H R QL+SV G+NRELL+T+ LL E L G +P L Sbjct: 301 HCRHQLLSVVGVNRELLLTEQLLSWETALSTGTYSTLPSL 340 >UniRef50_Q2NU34 DNA polymerase III delta prime subunit n=2 Tax=Gammaproteobacteria RepID=Q2NU34_SODGM Length = 332 Score = 340 bits (873), Expect = 3e-92, Method: Composition-based stats. Identities = 152/323 (47%), Positives = 192/323 (59%), Gaps = 2/323 (0%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M+WYPWL + +++A YQ GHHALL+ + PG G+ L YALSR+L+C+QP G KSCG Sbjct: 1 MKWYPWLNGPYRQILARYQQASGHHALLLHSQPGNGEAPLCYALSRWLMCRQPDGSKSCG 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C+LM AG HPD+Y PEKG+ +LGVD +R + + + AR GG KVVW+ A LL Sbjct: 61 VCHSCRLMMAGNHPDFYQPEPEKGRQSLGVDNIRAIIDSVYGRARQGGVKVVWLPHAELL 120 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T+ AANALLKTLEEPP +T+F L + P RLL TLRSRC L P E + WL + Sbjct: 121 TEQAANALLKTLEEPPTDTYFLLGCQTPSRLLPTLRSRCLYWPLPAPDEALGLRWLRQAG 180 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNH-E 239 + ALRL A +P AA AL Q WQ R LC AL + SGD+ +LL LN + Sbjct: 181 FDDPLSACTALRLCANAPLAAEALLQPGRWQERLALCAALYEAHVSGDFLTLLPVLNWYK 240 Query: 240 QAPARLHWLATLLMDALKRHHGA-AQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 + L+WL +LL DALK GA A + N D LVA LA L A Sbjct: 241 KDDGPLYWLLSLLTDALKWQQGAQASLVNADRAELVAALAARWPAGVLHAQWQLWLQCLR 300 Query: 299 QLMSVTGINRELLITDLLLRIEH 321 Q ++G+NRELL+T LL E Sbjct: 301 QWQEISGVNRELLLTHYLLNWEQ 323 >UniRef50_C0B0Z4 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C0B0Z4_9ENTR Length = 328 Score = 317 bits (813), Expect = 3e-85, Method: Composition-based stats. Identities = 157/329 (47%), Positives = 209/329 (63%), Gaps = 4/329 (1%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M WYPWL + +L++ YQ GRGHHALL+ A+ GMG +AL Y LSR+L+CQ QG KSC Sbjct: 1 MNWYPWLNQAYRQLISIYQEGRGHHALLLHAIEGMGGEALSYGLSRWLMCQNRQGLKSCN 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C+LM A THPD++ L EKGK+++G++AVR+VTEKL HA+ G +VVW+ D L Sbjct: 61 ECHSCRLMLAETHPDWHILQSEKGKSSIGIEAVRKVTEKLEHHAQQSGFRVVWIKDVEAL 120 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T+AAANALLKTLEEPP +T+F L + PE LLATLRSRC ++LA P Q+A WL +++ Sbjct: 121 TEAAANALLKTLEEPPKDTYFLLNCQHPEVLLATLRSRCFYYHLATPNLQHATHWLQQQL 180 Query: 181 TMSQDA-LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHE 239 A + AL LS +P AL+L + D W+ RE CQAL S+ D YS L LN + Sbjct: 181 PNIPYANSVTALNLSQNAPVLALSLLK-DEWKEREIFCQALYTSIQQHDLYSFLPQLNQD 239 Query: 240 QAPARLHWLATLLMDALKRHHGAAQV-TNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 A RL+WL +LL+DALK A N D L+ L+ S L + + R Sbjct: 240 NAERRLYWLLSLLLDALKYQTNAQVYCVNQDQQALIMALSQ-WSSDILLSTIDGWKQCRY 298 Query: 299 QLMSVTGINRELLITDLLLRIEHYLQPGV 327 QLM++ +NRELL+ + LL E+ L + Sbjct: 299 QLMTIPALNRELLLVEQLLDWENQLTTKI 327 >UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=2 Tax=Psychrobacter RepID=A5WFF8_PSYWF Length = 751 Score = 307 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 87/337 (25%), Positives = 130/337 (38%), Gaps = 35/337 (10%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L+ + R HHA L G+G + LS+ L C+ CG C C + G Sbjct: 28 KALINAIDHNRLHHAYLFTGTRGVGKTTIARILSKCLNCETGVTSTPCGVCSSCVAIDQG 87 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 D + + V+ RE+ + + G KV + + +L+ + NALLKT Sbjct: 88 RFIDLIEI---DAASRTKVEDTRELIDNVPYAPTQGRYKVYLIDEVHMLSTHSFNALLKT 144 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPPA F LAT +P++L T+ SRC L P P+Q + + +Q A Sbjct: 145 LEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPLPQQALSDHIANLLTQENIDFTQPA 204 Query: 187 LLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPSGDWYSLLAALNHEQAP 242 L + GS AL+L + + + + S D SLL + AP Sbjct: 205 LWQLANAAKGSVRDALSLTDQAIAFGQGRLTDETVNDMLGLIDSADLISLLLDIYQGNAP 264 Query: 243 AR---LHWLATLLMDALKRHHGAAQV----------------TNVDVPGLVAELANHLSP 283 A + + L+DA G A + N + LA + P Sbjct: 265 ALSAHIEQMRAQLVDAGSMFDGLADLLHQIAMVQLLPNVSLNVNDLQAQQITALAAQIGP 324 Query: 284 SRLQAILGDVCHIREQLMSVTGINREL-LITDLLLRI 319 LQ V REQ+ N L + LLR+ Sbjct: 325 DVLQLYYQIVIQGREQIKL---ANTPLQALEMCLLRL 358 >UniRef50_Q1N4U3 DNA polymerase III subunit delta n=1 Tax=Bermanella marisrubri RepID=Q1N4U3_9GAMM Length = 328 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 89/322 (27%), Positives = 154/322 (47%), Gaps = 3/322 (0%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PWL+ ++ L + R HA+L+ G+G + ++ +LC Q + CG C Sbjct: 8 PWLQSQWQTLSQQLSSQRLGHAVLLTGQQGVGKRVFLKEFAQLVLCHQGEQQTPCGECAS 67 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C+L AG HPD+ T+ PE+ + +D +R VT+ +N A G KVV + A ++ A Sbjct: 68 CRLFTAGNHPDFITVEPEETGKAIKIDQIRRVTDFVNTTASQGQRKVVLLGPAEVMNINA 127 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 +NALLK+LEEP ++ L + +P RLLAT++SRC+ + P Q + WL + + Sbjct: 128 SNALLKSLEEPSSQVTMLLYSHQPSRLLATIKSRCQQYSAPTPKFQDGLMWLQQN--SQE 185 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQAL-AYSVPSGDWYSLLAALNHEQAPA 243 L + LRL+ G+P + + + D CQ + + S W +++ + Sbjct: 186 SGLDSLLRLAQGAPLKVIEMIEQDVHVQYMQFCQDMQDLANHSVVWQGVVSKWKNWSVEY 245 Query: 244 RLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSV 303 L W LL+D + G ++ ++ +S + IL + ++ ++S Sbjct: 246 LLDWFYGLLLDVQRCKSGVQDRLIPELNMQTELVSKRMSVAEADGILSAIYESKKAVVSG 305 Query: 304 TGINRELLITDLLLRIEHYLQP 325 + N LLI LL+ L+ Sbjct: 306 SNPNPTLLIERLLVDWLGQLRQ 327 >UniRef50_B8F7F9 DNA polymerase III subunit delta n=9 Tax=Pasteurellaceae RepID=B8F7F9_HAEPS Length = 329 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 112/323 (34%), Positives = 167/323 (51%), Gaps = 5/323 (1%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M YPW + ++ +++Q GRGHHALL + G+G + LI + +LLC PQ ++ CG Sbjct: 1 MNLYPWHKQTHHQITSTFQQGRGHHALLFKTDSGLGTEQLIRHFAHWLLCHTPQQNQPCG 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C+ C L Q+G HPD++ LAP K+ +G+D VRE+T KL + A+ GG VV++ A L Sbjct: 61 QCKSCLLWQSGNHPDFHLLAPIDDKD-IGIDQVREITAKLQQFAQQGGNAVVYLAGAERL 119 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T+AAANALLKTLEEP +F L +LAT++SRC+ + P WL E Sbjct: 120 TEAAANALLKTLEEPNQNVYFLLEAPLQATMLATIQSRCQTWLVHTPESSQTFEWLQTEC 179 Query: 181 TMSQ-DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNH- 238 +Q + ALRL P + D +R+T Q S D + L +A + Sbjct: 180 PTAQSSEIETALRLCHNRPLLCKTFLETDRLPSRKTFLQTFWRFYKSRDVFLLFSAFDKE 239 Query: 239 -EQAPARLHWLATLLMDALK-RHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHI 296 EQ +L WL + DALK + A N D+ + + L+ L + Sbjct: 240 PEQVQQQLEWLGSFFSDALKAKMQIATGWLNPDLQNGILPFSQQLTAQGLLKGHQIIQQT 299 Query: 297 REQLMSVTGINRELLITDLLLRI 319 + L V +N+EL++ D L ++ Sbjct: 300 QRDLREVNAVNQELMLLDCLSKL 322 >UniRef50_Q3JAL5 DNA polymerase III, delta prime subunit n=2 Tax=Nitrosococcus oceani RepID=Q3JAL5_NITOC Length = 337 Score = 303 bits (777), Expect = 5e-81, Method: Composition-based stats. Identities = 104/322 (32%), Positives = 157/322 (48%), Gaps = 5/322 (1%) Query: 3 WYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGH 61 +YPW + + L+AS A R HA+L+ GMG + L + L C+ PQ G CG Sbjct: 4 FYPWHQSHWNSLMASQIAKRMPHAILLMGPEGMGKRSFASNLIQALSCEYPQKGGHGCGS 63 Query: 62 CRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 C GC+L AG+HPD TL P +GK T+ V+ +R++ L AR K V + A +T Sbjct: 64 CAGCRLQLAGSHPDNLTLFPREGKQTISVNQIRQLHSHLALKARQSLFKTVIIYPAEEMT 123 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT 181 +AAN+LLK LEEPP T L T RL T+RSRC+ + Q WL + + Sbjct: 124 LSAANSLLKILEEPPGRTVLLLITSASLRLPITIRSRCQQLFFTISKSQEVKMWLQQRLP 183 Query: 182 MSQD-ALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSG-DWYSLLAALNHE 239 S + + LRLS G P AL + + R+ L D + ++ + + Sbjct: 184 PSMNLDAVTLLRLSGGGPLRALEYVEQNFLFYRKEFINNLFSLTQGKLDLFEMVRSCLKD 243 Query: 240 QAPARLHWLATLLMDALKRHHGAAQ--VTNVDVPGLVAELANHLSPSRLQAILGDVCHIR 297 L+W++TL+ D ++ G ++ + N DV + LA S L A+L R Sbjct: 244 NLGEPLYWISTLVEDTIRLRSGVSKRFLVNHDVANSLQLLARRASFEMLFALLKKASCNR 303 Query: 298 EQLMSVTGINRELLITDLLLRI 319 E IN +LL+ ++L++ Sbjct: 304 EIWKGQININPQLLLEEILIQW 325 >UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8CMY6_SHEPW Length = 946 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 79/332 (23%), Positives = 117/332 (35%), Gaps = 36/332 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 9 KWRPAKFEQMVGQSHVLHALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAKGLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TATPCGQCSACVEIAEGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPSRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P+RL T+ SRC L + Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQDEISD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + AL + + GS AL+L Q + L Q + S+ Sbjct: 186 QLTNVLTAESLEFEATALTLLAKAANGSMRDALSLTDQAIAFGAGQVKLELVQTMLGSID 245 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTNV 268 +LL AL A + L LL A Sbjct: 246 EKQVIALLEALAKADVMALMQVSAGVLSFGAEPEEVLRSLLELLHQITLTQFAPAAAQMS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + A LSP ++Q + R+ L Sbjct: 306 LYSEQIKAFAQQLSPEQVQLYYQLLLTGRKDL 337 >UniRef50_A4J0K7 DNA polymerase III, delta prime subunit n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0K7_DESRM Length = 335 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 89/324 (27%), Positives = 144/324 (44%), Gaps = 13/324 (4%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + + L + Q R HA L PG+G + + ++ LLC+ PQG +CG+C+ C+ Sbjct: 10 HQQIIQTLKNAVQKSRVAHAYLFMGPPGIGKQTVARSFAQVLLCEAPQGGDACGNCKSCR 69 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 G HPD + L P T+ ++ +RE+ ++ G V + + +T AAN Sbjct: 70 QTDGGNHPDLHLLRPSG--VTIKIEQIRELQRQVQYKPYQGIRHVFILEKSETMTQEAAN 127 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDA 186 LKTLEEP + T F L + +P LL T+ SRC+ Q L +++D Sbjct: 128 CFLKTLEEPGSATVFILLSDQPYGLLPTILSRCQQLQFRSLSNQEVSEGLRVLCQVARDR 187 Query: 187 LLAALRLSAGSPGAALALFQG-DNWQARETLCQALAYSVPSGDWYSLLAAL-----NHEQ 240 L++GS G A+ L G D W RE L P Y L A + Sbjct: 188 AEELAPLASGSIGRAIQLAGGEDQWPLREKAL-WLVQRFPQMSQYQALQAAEELSNDRSA 246 Query: 241 APARLHWLATLLMDALKRHHGAAQ--VTNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 A L + D L H+ + + N D + E N +PS++ I+ ++ +E Sbjct: 247 AVEALEIMLLWFRDLLVYHYTRQKEILINQDKIDTLLEQENWYAPSKVVEIIEEIKLAKE 306 Query: 299 QLMSVTGINRELLITDLLLRIEHY 322 +LM+ N + + ++L+I Y Sbjct: 307 RLMA--NANTRMALEVMMLKINSY 328 >UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJV5_9BACT Length = 533 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 80/352 (22%), Positives = 138/352 (39%), Gaps = 39/352 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + E L ++ R HA L G+G +L L++ L C Sbjct: 9 KYRPQNFKEVYAQEHITEILQSAIATNRIAHAYLFTGPRGVGKTSLARILAKSLNCVNGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C + AGT PD + G + VD +RE+ +L A K+ + Sbjct: 69 TTTPCNACSNCLEITAGTSPDVIEI---DGASNTSVDDIRELQRELLYPASSSNYKIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F AT EP+++L T+ SRC+ + P V Sbjct: 126 DEVHMLSKNAFNALLKTLEEPPDNVIFIFATTEPQKVLPTIISRCQRYDFKRIPIASIVQ 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L + + ++L R + G AL+L + + + +P Sbjct: 186 RLQEISVLEGIKIDSESLYLIARKADGGMRDALSLMDQAISYCLNNITIDKVRQIFGMIP 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLL---MDA---------------LKRHHGAAQVTN 267 + + L + ++ ++ L + +D L++ + N Sbjct: 246 NQVYQKFLTLIYNKDTQGLINELHLIFEQGIDLQEFIANMQEFVRILILRKLQVQIKDIN 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D L ELA ++L IL + R L + N L++ L++++ Sbjct: 306 PDELSLFDELAELFGQNKLLYILSYLIACRNDLRGSS--NPYLILEALMIKL 355 >UniRef50_A6VYC4 DNA polymerase III, subunits gamma and tau n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VYC4_MARMS Length = 752 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 87/353 (24%), Positives = 134/353 (37%), Gaps = 40/353 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ-QP 53 +W P + LV + + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPQTFLEMAGQDHVLQALVNALRQQRLHHAYLFTGTRGVGKTTIARIFAKCLNCETNG 68 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + CG C C+ + G D + + V+ RE+ E + G KV Sbjct: 69 ISPEPCGTCDSCREIAEGRFVDLIEV---DAASRTKVEDTRELLENVQYAPTRGRFKVYL 125 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ + NALLKTLEEPPA F LAT +P++L T+ SRC L Q V Sbjct: 126 IDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMSPQRVV 185 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 +L EV Q AL + + GS AL+L N E+ A+ V Sbjct: 186 DYLQTVLTTEEVNFDQPALWQIGQAANGSMRDALSLTDQAIAFGNGTISESGVTAMLGLV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATL-------------LMDALKRHHGAAQVTNVDVP 271 LL ++ + A L + L L+D L R QV + Sbjct: 246 NQAQVLDLLESVASKNAAQVLTRIEQLADYQPDFTAICGSLLDVLHRVAIEQQVPGALMD 305 Query: 272 GL-----VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 L + +A +S +Q + + R L + L+LR+ Sbjct: 306 QLGDLARIQAIAASVSSEEIQIMYQSLLIGRRDLHLAH--SARAGFEMLMLRL 356 >UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau subunits n=2 Tax=Alteromonadales RepID=Q3IKN4_PSEHT Length = 842 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 84/355 (23%), Positives = 138/355 (38%), Gaps = 45/355 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + LV + R HHA L G+G + ++ L C + Sbjct: 9 KWRPQTFHELVGQSHVKQALVNALTQNRLHHAYLFTGTRGVGKTTIARIFAKSLNCDEGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++AG + D + + V+ RE+ + + G KV + Sbjct: 69 SANPCGQCSSCKDIEAGRYIDLLEI---DAASRTKVEDTREILDNVQYAPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L + T Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNALSQSEIKT 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L ++ DAL + + GS AL+L N Q + + Sbjct: 186 QLEHVLTHEKLNFDDDALRIIAKAADGSMRDALSLTDQAIAQTNGDINNQAVQTMLGLMD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLA----------TLLMDALKRHH-----------GAAQ 264 + SLLAAL + A + +A LL D + H A Sbjct: 246 THYSQSLLAALLAQDGAALMKEVANVASRNPNYVALLDDLIALTHLTQLSQLVPEAAALD 305 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 TN D + +A + +P ++Q + + ++ L L ++LR+ Sbjct: 306 ETNADY---ITHVAQNTNPQQIQIYYQLLLNGKKDLQWAPE--PRLGFEMIMLRL 355 >UniRef50_D0IB97 DNA polymerase III delta prime subunit n=7 Tax=Vibrionaceae RepID=D0IB97_VIBHO Length = 322 Score = 300 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 4/319 (1%) Query: 2 RWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGH 61 + YPW + ++ R HHA+L+ A G G L L++ +LC+ + CG Sbjct: 4 KRYPWHQEIWQSWQQLLGQDRLHHAILLSAPTGSGKIELAAMLAKTILCKNGVT-EPCGI 62 Query: 62 CRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 C CQL A THPD++ L PE LGVDA+R + E ++LGG +V+ + +A + Sbjct: 63 CHSCQLFDADTHPDFHWLKPEAEGKQLGVDAIRAGNQYAWETSQLGGQRVILIQNADRMG 122 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT 181 +AAANALLKTLEEPP+ F L ++ + +L T+ SRC P E W+ E Sbjct: 123 EAAANALLKTLEEPPSHCHFILLSQSMDTMLPTVVSRCNKWKPKLPEESVVKRWV--EGE 180 Query: 182 MSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQA 241 + + L LR++ G+P AA A + + + + A V + + Sbjct: 181 LFESVPLQVLRINRGAPLAAKAFVENGSVARHKAVVDGFASFVIQKQGLFTVTEQVVKAQ 240 Query: 242 PARLHWLATLLMDALKRHHGAAQ-VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 L WL+ LL+D +K G+ + + + D + LA+ L S++ A L + ++ +L Sbjct: 241 QEGLQWLSFLLLDVVKIQQGSDEAIVHCDEMKTLQTLASSLPHSQVMAQLMGLNRMKAEL 300 Query: 301 MSVTGINRELLITDLLLRI 319 TG+N ELLI+ L Sbjct: 301 ARHTGLNSELLISRWLTEF 319 >UniRef50_Q0VQM5 DNA polymerase III, delta prime subunit n=2 Tax=Alcanivorax RepID=Q0VQM5_ALCBS Length = 335 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 101/316 (31%), Positives = 156/316 (49%), Gaps = 4/316 (1%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW +L+ + GR HALL+ G+G L +L++ LLC++P CGHC+G Sbjct: 13 PWHSDAMAQLLDQHARGRLPHALLLSGPKGIGKLRLAESLAQTLLCEKPSAGLPCGHCQG 72 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 CQL AGTHPD Y L+PE+ T+ +D VR++ A+ G +V ++ A L A Sbjct: 73 CQLSTAGTHPDLYRLSPEEKSKTIKIDQVRKLVAFATRTAQYSGYRVAIISPAEALNRNA 132 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 NALLKTLEEP +T L + +P LL T+RSRC+ L P +++A+ WL +V Sbjct: 133 QNALLKTLEEPGTQTLLLLVSDQPTLLLPTIRSRCQQRILPLPVKEHALQWLQSQVG--- 189 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPAR 244 ++ + L + G+P ALAL Q + + R L L + + + + P Sbjct: 190 ESAASLLDAAQGAPLRALALEQAEWFADRTRLLDTLVRVAEGRQSVAQASPVLAKHDPTE 249 Query: 245 L-HWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSV 303 + + L +L + Q ++ + L+ L + P+RL V R L+S Sbjct: 250 MASVIYGWLSRSLNQRFSGQQSSDALLAPLLERLNKAVPPARLLRAAQRVLEGRRALLSG 309 Query: 304 TGINRELLITDLLLRI 319 N+ELL LL + Sbjct: 310 ANPNKELLYEQWLLVL 325 >UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 Tax=Bacillales RepID=C6CST5_PAESJ Length = 590 Score = 300 bits (769), Expect = 4e-80, Method: Composition-based stats. Identities = 80/353 (22%), Positives = 133/353 (37%), Gaps = 42/353 (11%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P R + L + + R HA L G G L++ + C++ Sbjct: 10 WRPQTFQDMVGQRHIIQTLQNAIREDRVSHAYLFNGPRGTGKTTAAKVLAKAVNCERGPA 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + AG D + + G+D +R++ +K+ KV + Sbjct: 70 EEPCNECDACRGITAGHIMDVIEI---DAASNRGIDEIRDIRDKVRYAPSEVRYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP F LAT EP +L AT+ SRC+ + Sbjct: 127 EVHMLTSEAFNALLKTLEEPPGHVIFILATTEPHKLPATIISRCQRFDFRQVSLEEQSER 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQ--GDNWQARETLCQ---------- 218 L + +DA+ RLS G A++L + +R TL Sbjct: 187 LFEICRDEGIEAEEDAIAYIARLSEGGMRDAISLLEQVAAFGGSRITLDGAVDVTGGMAA 246 Query: 219 ----ALAYSVPSGDWYSLLAALN-----HEQAPARLHWLATLLMDALKRH---HGAAQVT 266 ALA ++ + +++ + + A + L D L GA Sbjct: 247 DQFYALAEAIRDRNVAAIMPLVEGLTQAGKSADKCMENLIFYFRDLLVLKLAPQGAVTER 306 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 VD +A+ S RL ++ + + + + + L L++I Sbjct: 307 VVD-AERFRGMADAFSSERLFKMIDTLNTYQSDMKHASQ--PQTLFEVALMKI 356 >UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYL7_9GAMM Length = 697 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 83/337 (24%), Positives = 134/337 (39%), Gaps = 35/337 (10%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L+ + R HHA L G+G + L++ L C+ + CG C CQ + +G Sbjct: 25 KALINAIHNQRLHHAYLFTGTRGVGKTTIARILAKCLNCETGVTSEPCGVCGVCQSIDSG 84 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 D + + V+ RE+ + + G KV + + +L+ + NALLKT Sbjct: 85 RFIDLIEI---DAASRTKVEDTRELLDNVPYAPTQGRYKVYLIDEVHMLSTHSFNALLKT 141 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPPA F LAT +P++L T+ SRC L P P+ +L +++ DA Sbjct: 142 LEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPLPQVALAEYLGTILNKEQISYESDA 201 Query: 187 LLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPSGDWYSLLAAL---NHE 239 L + GS AL+L N + + + + + D ++LA + N + Sbjct: 202 LWQLSSSAKGSVRDALSLTDQAIAFGNGNVTDEVIRQMLGLIDQADVIAILANIYQQNTQ 261 Query: 240 QAPARLHWLATLLMDA----------------LKRHHGAAQVTNVDVPGLVAELANHLSP 283 Q + L ++DA L+ N + +LA L Sbjct: 262 QLTQSIQLLREQVVDAKAVFDRLAETLHQLAILQALPNFDLQINRQQSEQLQQLAQKLPA 321 Query: 284 SRLQAILGDVCHIREQLMSVTGINREL-LITDLLLRI 319 LQ V RE L N + + LLR+ Sbjct: 322 ELLQLYYDIVVKSRENLAL---ANTPMQALEMCLLRL 355 >UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Tax=Veillonellaceae RepID=C9KLC0_9FIRM Length = 631 Score = 299 bits (766), Expect = 9e-80, Method: Composition-based stats. Identities = 77/349 (22%), Positives = 135/349 (38%), Gaps = 25/349 (7%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + +G HA L G G + L++ L C+ Sbjct: 9 KWRPQTFKDLVGQEHISRTLANAITSGHIGHAYLFAGPRGTGKTSTAKILAKALNCEHGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + G+ D + + + G+D +R++ E + G KV + Sbjct: 69 TPEPCGQCEQCRKIADGSSMDVFEI---DAASNRGIDEIRDLRETVKFAPVDGRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPPA F LAT E ++ T++SRC+ + + + Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPAHVVFILATTEAHKVPPTIQSRCQRYDFKRITVEEIES 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L ++ +AL + G AL++ A T+ + + V Sbjct: 186 RLRYITAEMKMEAEDEALAMIAIQADGGMRDALSILDQCAALAEGTITAERVRQILGLVG 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 Y + AL L LA LL D ++++ ++ + A + Sbjct: 246 HDWIYKMTKALAARNVQEALQILAELLRDGKDLKQILSELSLHLRSLMIFQAAGTVEAMD 305 Query: 286 LQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL 334 L A DV + +L + ++ ++ R+ + P P + Sbjct: 306 LYAEPQDVLQDQAKLFAPE------VLPRMIARLHEAMTEMKWSPQPRI 348 >UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y5_9GAMM Length = 569 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 77/334 (23%), Positives = 119/334 (35%), Gaps = 40/334 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L+ R HHA L G+G L ++ L C+Q Sbjct: 9 KWRPKSFEEVVGQQHVLRALINGLDQNRLHHAFLFSGTRGVGKTTLARIFAKSLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C+ C + +G D + + VD RE+ + + G KV + Sbjct: 69 SSTPCGVCQSCTEVDSGRFVDLIEV---DAASRTKVDDTRELLDNVQYAPSQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F AT +P++L T+ SRC L Sbjct: 126 DEVHMLSTSSFNALLKTLEEPPPHVKFLFATTDPQKLPVTILSRCLQFNLRRLELTQISD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + +AL R + GS AL+L + + S+ Sbjct: 186 HLRYLLEQETIKAEPEALEQLARAADGSMRDALSLLDQAIAFGGGEVTSESVFQMLGSIS 245 Query: 226 SGDWYSLLAALNHEQAPARL-------------HWLATLLMDALKRHHGAAQVTNVDVPG 272 +L AL + A L H + L+ AL A D+ Sbjct: 246 QDQLILILDALLKQDGKALLAQSAELAALGRDFHVVFDFLLSAL--QQIATLQLVPDLEP 303 Query: 273 L------VAELANHLSPSRLQAILGDVCHIREQL 300 + + ELA P +Q + H + L Sbjct: 304 VEANSPQLTELAAQFDPETIQLLYQIALHGKRDL 337 >UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=4 Tax=Gammaproteobacteria RepID=A1U128_MARAV Length = 637 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 88/353 (24%), Positives = 132/353 (37%), Gaps = 41/353 (11%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L+ + + R HHA L G+G + L+R L C+ Sbjct: 9 KWRPRTFEDMVGQEHVLQALIHALEHQRLHHAYLFTGTRGVGKTTIGRLLARCLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + D + + GVD +RE+T+ + G KV + Sbjct: 69 TPNPCGECDSCKEILENRFVDLIEI---DAASRTGVDDMRELTDNVQYAPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ + NA LKTLEEPP F LAT +P++L T+ SRC L ++ V Sbjct: 126 DEVHMLTNQSFNAFLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRMTPEHIVG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L ++ AL R + GS AL+L E L + ++ Sbjct: 186 HLKHVLTEEQIPFEDPALWLLARAADGSMRDALSLTDQAIAFGNENLAASDVSNMLGTID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLAT----------LLMDALKRHH---------GAAQVT 266 D ++ AL P L + +L D L H G+A Sbjct: 246 QRDIQRIVNALVERDGPGLLSEINRISDFAPDYGVILSDMLSLFHRVTMEQVVPGSADNA 305 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D V ELA LS Q R+ L + + LLR+ Sbjct: 306 MGDAAQ-VQELARRLSAEDAQLFYQTALIGRKDLSVTP--DARMGFEMTLLRM 355 >UniRef50_A6FHN9 HolB n=1 Tax=Moritella sp. PE36 RepID=A6FHN9_9GAMM Length = 323 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 103/324 (31%), Positives = 168/324 (51%), Gaps = 4/324 (1%) Query: 3 WYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHC 62 YPWL P +EK AGR HHAL I + GMG + L++ LLC++P G + C C Sbjct: 2 LYPWLLPYWEKQQTQMTAGRLHHALFITSASGMGKLSYAQTLAQTLLCKEPIGWEPCHRC 61 Query: 63 RGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD 122 CQL + HPDYY ++ E GK +GVD +R +++KLNEH++LGG KVV + A Sbjct: 62 HPCQLFETSVHPDYYLVSTEPGK-VIGVDRIRHISQKLNEHSQLGGNKVVIIEHAESFNL 120 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM 182 A+ANALLKTLEEP ++ L ++L T+ SRC+ +L P EQ ++ WL ++ + Sbjct: 121 ASANALLKTLEEPSNGSYLILLAENKSQVLPTIYSRCQKLHLPAPAEQESMAWLQQQFPI 180 Query: 183 SQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAP 242 L A+R++ G+P L+ + R+ + + + L + ++ Sbjct: 181 ESPTL-TAIRINHGAPLHTLSYLNNGDDDLRKEIFSNITLLTTQPAAITRLCEIISDRTL 239 Query: 243 ARLHWLATLLMDALKRHHG--AAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 +L WL +L+D K G + N D + + LS ++ + ++ +R+ L Sbjct: 240 EKLSWLQFILLDLQKVKRGVSIDYIVNTDQLEWLTHFSTQLSQDKITQLQSELTALRQLL 299 Query: 301 MSVTGINRELLITDLLLRIEHYLQ 324 M + E L+ L++++ Y+ Sbjct: 300 MQNNNLTAETLVLSFLIKLKRYIN 323 >UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A300_NATTJ Length = 589 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 85/357 (23%), Positives = 134/357 (37%), Gaps = 47/357 (13%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + R HA L G G ++ ++ L C Q Sbjct: 9 QWRPKYFRDLVGQEHVVTTLKNAISQSRISHAYLFSGPRGTGKTSVAKVFAKALNCDHSQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 ++ CG C C GT D + + G+D +RE+ + + G KV V Sbjct: 69 DNEPCGQCSRCIEHDRGTFMDILEI---DAASNRGIDEIREIRDHVAYSPSEGNYKVYIV 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F LAT EP +L T+ SRC+ Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPDYVIFILATTEPHKLPMTVLSRCQRFDFYRLSTSKIEK 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQ------GDNWQARETLCQALAYS 223 L + ++ ++++L + S G AL+L G Q + + + Sbjct: 186 QLQNVIDSKNLSATKESLSIIAKKSDGGMRDALSLLDQSLSFLGSGEQLKVDHVLEVTGT 245 Query: 224 VPSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDAL--KRHHGAAQ 264 V +Y LL AL L+ L L D L K + Q Sbjct: 246 VSEDTFYDLLMALKEGDLAQILNIVQQLSDSGKDFGQFLNDLIVYLRDLLLFKLKGPSDQ 305 Query: 265 VT--NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + +VD V +L + + L +++ + ++ + NR L++ RI Sbjct: 306 LLWGSVD---SVKKLHKYFTKDELISMIDFLSEKQQAMKWSQ--NRRLIVEMAFYRI 357 >UniRef50_Q1QAW7 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QAW7_PSYCK Length = 685 Score = 297 bits (761), Expect = 3e-79, Method: Composition-based stats. Identities = 77/318 (24%), Positives = 122/318 (38%), Gaps = 31/318 (9%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L+ + R HHA L G+G + LS+ L C CG C C + G Sbjct: 28 QALINAIDYNRLHHAYLFTGTRGVGKTTIARILSKCLNCDTGITSTPCGVCDNCVAIDQG 87 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 D + + V+ RE+ + + G KV + + +L+ + NALLKT Sbjct: 88 RFIDLIEI---DAASRTKVEDTRELLDNVPYAPSQGRYKVYLIDEVHMLSTHSFNALLKT 144 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPP F LAT +P++L T+ SRC L P + L +V +Q A Sbjct: 145 LEEPPEHVKFLLATTDPQKLPITIISRCLQFVLRPLSQSLLSEHLANVLTQEQVGYTQPA 204 Query: 187 LLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPSGDWYSLLAAL---NHE 239 L + GS AL+L + ++ + + D SL+ + + Sbjct: 205 LWQLASAAKGSVRDALSLTDQAIAFGQGALDDVTVNSMLGLIDAADLVSLITDIYNHDKP 264 Query: 240 QAPARLHWLATLLMDALKRHHGAAQV----------------TNVDVPGLVAELANHLSP 283 A + + ++DA G A++ N + +LA H+SP Sbjct: 265 AVAAHIEQMRAQMVDASSMFDGLAELLHQLALCQLLPEVALNVNEAQAQHIDQLAQHMSP 324 Query: 284 SRLQAILGDVCHIREQLM 301 LQ V RE + Sbjct: 325 DVLQLYYEIVVQAREGVK 342 >UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM15_SYNFM Length = 602 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 126/340 (37%), Gaps = 40/340 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + ++ R H+ L G+G ++ L++ L C+ Sbjct: 9 KWRPQTFEEVVGQPHVTRTLQNAIRSSRIAHSYLFTGARGVGKTSIARILAKALNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C ++ G D + G + G+D+VRE+ E + KV + Sbjct: 69 TPTPCNVCSNCTEIRQGNAVDVLEI---DGASNRGIDSVRELRETVRYRPAKSRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F AT EP ++ AT+ SRC+ P V Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPEHVVFIFATTEPHKIPATILSRCQRFDFRRIPSHMLVD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQA---------- 219 L +V +S+ L A R + GS A +L + +R+ L Sbjct: 186 HLRHIAAQEDVALSEGVLYAIAREADGSMRDAQSLLEQMLSFSRDGLSDEEVLDVLGVID 245 Query: 220 ------LAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 +V GD + L + L + L G + Sbjct: 246 RRSIHRTGTAVLEGDVRTCLDVVEDIYRRGMDIRRFCRQLCDYFRNLLVVAFGEGDSRRL 305 Query: 269 DVP----GLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 D+P L+AE A +P L V E++ T Sbjct: 306 DLPSDEKQLLAEAAGKTTPESLYLYFQTVLKSEEEIRRST 345 >UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB01_KANKD Length = 773 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 85/349 (24%), Positives = 136/349 (38%), Gaps = 37/349 (10%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ-QP 53 +W P + + LV + ++GR HHA L G+G + LS+ L C+ Sbjct: 9 KWRPKNFDELQGQEHVSRALVNAIESGRLHHAYLFTGTRGVGKTTIARILSKCLNCETNG 68 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 K CG C C + G D + + VD RE+ E + G KV Sbjct: 69 LTSKPCGECGSCVEIDEGRFVDLIEV---DAASRTKVDDTRELLENVQYKPTRGRYKVYL 125 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L++++ NALLKTLEEPP F LAT +P++L T+ SRC +L EQ Sbjct: 126 IDEVHMLSNSSFNALLKTLEEPPEHVIFLLATTDPQKLPVTVLSRCLQFHLKHMEEQTIS 185 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 L + AL R + GS AL+L + +E + + ++ Sbjct: 186 KHLAYILQQESIDFETPALELISRSAEGSMRDALSLLDQAIAFGQGKVQEEDIRTMLGTI 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATL------LMDALKRH---------HGAAQVTNVD 269 LL AL ++ + + +A + DALK + V Sbjct: 246 DHQFMVKLLEALANKDSAEAIKAVAEMSHYPVDFADALKELLSRIHQVAIFQSTGVLLDQ 305 Query: 270 VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINR--ELLITDLL 316 V + A+ ++ LQ H R L + E+ + +L Sbjct: 306 AAPYVEDFASKIASDDLQLYYQMGLHARRDLEWAPSPRQGLEMALLRML 354 >UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Tax=Clostridiales RepID=C7GFD5_9FIRM Length = 526 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 70/357 (19%), Positives = 134/357 (37%), Gaps = 45/357 (12%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L +A R HA L G G + ++ + C+ P Sbjct: 9 KFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKIFAKAVNCEHPV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + AG + + + GVD +R++ E++ G KV + Sbjct: 69 DGSPCGECPACRAIAAGNSMNVIEI---DAASNNGVDNIRQIREEVEYRPTEGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP+ F LAT E ++ T+ SRC+ + + Sbjct: 126 DEVHMLSIGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRISIETISA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG------DNWQARETLCQALAYS 223 L +VT+ + A+ + + GS AL+L + + + L + Sbjct: 186 RLMELMEKEQVTVEERAIRYIAKAADGSMRDALSLLDQCIAFYLGQDLTYDKVLETL-GA 244 Query: 224 VPSGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAAQVT 266 V + + LL + + + + + L + + Sbjct: 245 VDTEIFSRLLRQILEKNVTGAIGVIDEMVIEGRELGQFVNDFTWYLRNLMLVQSSDDMED 304 Query: 267 NVDV----PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 +D+ L+ E A + L + + Q+ + + +LI ++++ Sbjct: 305 VLDISTENLALLKEEAQMVDTDILMRYIRIFSELSNQIR--YAVQKRILIEIAVIKL 359 >UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31I98_THICR Length = 696 Score = 297 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 84/348 (24%), Positives = 133/348 (38%), Gaps = 41/348 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + R HHA L G+G + S+ L C+Q Sbjct: 9 KWRPKNFSELVGQTHVMQALSNALDQQRLHHAYLFTGTRGVGKTTIARIFSKALNCEQGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C+ + G D + + V+ RE+ E + G KV + Sbjct: 69 TSKPCGVCSTCRSIDEGRFVDLIEV---DAASKTKVEDTRELLENVQYAPVQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P +L T+ SRC L Sbjct: 126 DEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPHKLPITVLSRCLQFNLMRLTLPQIQQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS---VPS 226 L +VT + AL + + GS +L++ L QA+AY V Sbjct: 186 HLAYILQQEQVTFEETALAMIAKSADGSARDSLSI-----------LDQAIAYGGGKVQY 234 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRL 286 ++L ++ + L LA D LK + VD L +L L + Sbjct: 235 DAVQAMLGLVDQQFTLNILSALANESADELKEVIQQLALMGVDYTALNGQLIEALHQMSM 294 Query: 287 QAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL 334 +LGD+ L+ ++L ++ L P + + + Sbjct: 295 LQVLGDLTES------------SLIEVEMLQKLSEQLSPERIQVLYQI 330 >UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 Tax=Bacteria RepID=A3QF53_SHELP Length = 1113 Score = 296 bits (759), Expect = 5e-79, Method: Composition-based stats. Identities = 76/332 (22%), Positives = 114/332 (34%), Gaps = 36/332 (10%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 9 KWRPATFEQVVGQSHVLHALTNALSQNRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TATPCGQCASCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P+RL T+ SRC L Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTLDEICV 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +V A+ + + GS AL+L Q R T Q + ++ Sbjct: 186 QLGHILAQEQVGYDDGAVKLLAKAANGSMRDALSLTDQAIAFGAGQVRLTQVQTMLGTID 245 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTNV 268 LL AL + L LL + Sbjct: 246 EHHVIVLLKALCDGDVDLLMKVTGDVLSFGADPHEVLRSLLELLHQITLTQFAPSAAQLS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + A L P ++Q + + R+ L Sbjct: 306 QYAEQIKAFAKQLRPEQVQLYYQLLLNGRQDL 337 >UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=8 Tax=Gammaproteobacteria RepID=Q21L32_SACD2 Length = 690 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 135/365 (36%), Gaps = 40/365 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L+ + GR HHA L G+G ++ L++ L C+ Sbjct: 9 KWRPRTFREMIGQEHVLRALINALDHGRLHHAYLFTGTRGVGKTSIARILAKCLNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C + G D + + V+ RE+ + + G K+ + Sbjct: 69 SSEPCGECSACVEISEGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTRGRYKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L++ + NALLKTLEEPP F LAT +P++L T+ SRC L + V Sbjct: 126 DEVHMLSNHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKNMSPERIVG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----------------NWQAR 213 L + + AL R + GS AL+L Sbjct: 186 HLSHILEKEVIPFEESALWQLARSADGSMRDALSLTDQSISFGGGKVSEDEVASMLGTID 245 Query: 214 ETLCQALAYSVPSGDWYSLLAALNH--EQAPARLHWLATLLMDALKRHHGAAQVTNVDV- 270 L Q L ++ +GD +L ++ E AP LA L+ + A +D Sbjct: 246 HKLVQNLVGALIAGDGSQILTSVAKFAEHAPDFDVALADLITLLHRIAIAQALPDALDNS 305 Query: 271 ---PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + E A+ L+P +Q R L + LLR+ +P Sbjct: 306 YGDRTQILEFASKLAPEDVQLFYQTALIGRRDLSLSP--DPRSGFEMTLLRM-LAFKPQG 362 Query: 328 VLPVP 332 V VP Sbjct: 363 VADVP 367 >UniRef50_D0WGG2 DNA polymerase III, subunit gamma and tau n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGG2_9ACTN Length = 862 Score = 296 bits (758), Expect = 7e-79, Method: Composition-based stats. Identities = 90/369 (24%), Positives = 143/369 (38%), Gaps = 44/369 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + + ++ R HA L G G + L++ LLC++ Sbjct: 8 KYRPQTFDDVVGQIHIERTIKNALESDRVSHAYLFCGPRGTGKTTMARLLAKALLCEKGP 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 G C C + GTHPD + + GV+ VRE + ++ G K+ Sbjct: 68 TPAPDGECEQCLAIAEGTHPDVNEM---DAASRTGVENVREEIIGRVQFAPVRGRYKIYI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ AA NALLKTLEEPP+ F L T +P ++ AT+ SRC+ + + Sbjct: 125 IDEVHMLSTAAFNALLKTLEEPPSHVVFILCTTDPHKVPATIHSRCQRFDFHRLANEEII 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG--DNWQARETLCQAL--AYSV 224 L S V +AL A + + G AL + + R T+ AL ++ Sbjct: 185 ARLGAVCASEGVEFEAEALELAAKRAQGGMRDALTTLEQLIAFGEGRVTMQVALDVLGAL 244 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMD--ALKRHHGAAQV 265 S D ++A + A A W LA+ + D A GA + Sbjct: 245 DSNDMTDIVARIARRDAAACFTWVAEYVETGADLAQFARDLASYVRDLYAFILTDGALEP 304 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + +A A P RL +L + + +L S N L L R+ P Sbjct: 305 RSSATNEQLAAQAGLFGPDRLAHVLSILGDVCAELRSSA--NPRLSFEIALTRMAR---P 359 Query: 326 GVVLPVPHL 334 L + L Sbjct: 360 ESDLTLASL 368 >UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 Tax=Shewanella RepID=A1RIP8_SHESW Length = 984 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 117/332 (35%), Gaps = 36/332 (10%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 36 KWRPATFEQMVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGV 95 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 96 TATPCGVCGSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 152 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L + T Sbjct: 153 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQDEIGT 212 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +AL + + GS AL+L T Q + S+ Sbjct: 213 QLNHILTQEQLPFEVEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLTQVQTMLGSID 272 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 +LL AL A L L LL A Sbjct: 273 EQHVIALLKALTDADITVLMQTSAQVLAYGADAQEVLRSLLELLHQITLTQFAPACAQQS 332 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + A L+P ++Q + R+ L Sbjct: 333 LYSAQIRAFAEQLTPEQVQLYYQILLTGRKDL 364 >UniRef50_A5D691 DNA polymerase III, gamma/tau subunits n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D691_PELTS Length = 335 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 95/314 (30%), Positives = 141/314 (44%), Gaps = 10/314 (3%) Query: 13 KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT 72 L+ + GR HA L G+G A +R LLC P+G +CG CR C+ ++ Sbjct: 16 ALMNAVACGRVAHAYLFAGPAGVGKKTTALAFARALLCPVPEGGDACGTCRQCRQVEHRN 75 Query: 73 HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTL 132 HPD Y + P T+ ++ +RE+ + GG K+ + A +T AAN LLKTL Sbjct: 76 HPDLYIVNPSGA--TIKIEQIRELQHRAPYRPYQGGRKLFLICRAETMTAEAANCLLKTL 133 Query: 133 EEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALR 192 EEPP +T L + +P+ LL T+ SRC+ + P L+ ++Q+ L A Sbjct: 134 EEPPHDTVLILVSDQPQSLLPTVLSRCQQCFFKSIPLSELSGSLTARHGLAQEEALLAAA 193 Query: 193 LSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAA----LNHEQAPARLHWL 248 +S GS G ALA G + R +G +L A + E+A L L Sbjct: 194 MSGGSMGKALAYASGSLAERRNAAGALAGALKTAGPLEALEMAGKISEDREEALLILEML 253 Query: 249 ATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGI 306 D L + AA + N D GLV + A P RL I+ D+ R ++ Sbjct: 254 ICWFRDLLVYRETEDAALLFNADRAGLVKKEAQSFQPGRLVEIIEDIEATRNKI--EANA 311 Query: 307 NRELLITDLLLRIE 320 + L + L LR+ Sbjct: 312 STRLALEALFLRLS 325 >UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 Tax=Neisseria RepID=B4RLX5_NEIG2 Length = 736 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 80/337 (23%), Positives = 132/337 (39%), Gaps = 37/337 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + GR HHA L+ G+G + L++ L C+ Q Sbjct: 38 KWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAKSLNCENAQ 97 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C + AG + D + + G+D +REV E G KV + Sbjct: 98 HGEPCGVCQSCTQIDAGRYVDLLEI---DAASNTGIDNIREVLENAQYAPTAGKYKVYII 154 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPP F LAT +P ++ T+ SRC L Q Sbjct: 155 DEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTAQQVAD 214 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ ++ AL R +AGS AL+L + + E + + +V Sbjct: 215 HLAHVLDSEKIAYDPPALQLLGRAAAGSMRDALSLLDQAIALGSGKVAENDVRQMIGAVD 274 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQ-----------------VTNV 268 Y LL + ++ A L + A+ + + + + Sbjct: 275 KQYLYELLTGIVNQDGEALLAKAQEMAACAVGFDNALGELAILLQQLALIQAVPSALAHD 334 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 D ++ LA +S ++Q H + L Sbjct: 335 DPDSDILHRLAQTISGEQIQLYYQIAVHGKRDLGLAP 371 >UniRef50_B1L8C0 DNA polymerase III, subunits gamma and tau n=6 Tax=Thermotogaceae RepID=B1L8C0_THESQ Length = 478 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 74/328 (22%), Positives = 133/328 (40%), Gaps = 36/328 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + ++ + Q H + G G L L++ L C+ + Sbjct: 7 KYRPKTFSEVVDQDHVKKAIIGAIQKNSVAHGYIFAGPRGTGKTTLARILAKSLNCENRK 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G + C CR C+ + GT D L + G+D +R + + + G KV + Sbjct: 67 GVEPCNSCRACREIDEGTFMDVIEL---DAASNRGIDEIRRIRDAVGYRPMEGKYKVYII 123 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP+ F LAT E++ T+ SRC++ P++ Sbjct: 124 DEVHMLTKEAFNALLKTLEEPPSHVVFVLATTNLEKVPPTIISRCQVFEFRNIPDELIEK 183 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQAL---- 220 L + + ++AL + ++G AL + + + ET+ +AL Sbjct: 184 RLQEVAEAEGIEIDREALSFIAKRASGGLRDALTMLEQVWKFSEGKIDLETVHRALGLIP 243 Query: 221 -------AYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 ++ SGD + L+ + + L++ L+R G QV+ Sbjct: 244 IQVVRDYVNAIFSGDVKRVFTVLDDVYYSGKDYEVLIQEAVEDLVEDLERERGVYQVSAN 303 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHI 296 D+ + +L N L + VC + Sbjct: 304 DIVQVSRQLLNLLREIKFAEEKRLVCKV 331 >UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD9 Length = 600 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 114/282 (40%), Gaps = 23/282 (8%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 L + + HA L G G + L++ + C K CG C C+ Sbjct: 23 QEAIITTLKHAIDEKKIAHAYLFCGPRGTGKTTVAKLLAKAVNCTG--NPKPCGECENCK 80 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 ++ GTHPD + + GV+ VR + +K+ G KV + + +++ A N Sbjct: 81 QIENGTHPDVIEI---DAASNNGVEEVRSLIDKVKYAPTQGQYKVYIIDEVHMMSPGAFN 137 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW----LSREV-T 181 ALLKTLEEPPA F LAT EP ++L T+ SRC+ +Q V L E T Sbjct: 138 ALLKTLEEPPAHVIFILATTEPHKILPTIISRCQRFDFTRLTDQEMVQRMQYVLKEEGKT 197 Query: 182 MSQDALLAALRLSAGSPGAALALFQ------GDNWQARETLCQALAYSVPSGDWYSLLAA 235 +L RL+ G AL++ + D+ + + V D +LL Sbjct: 198 YDDGSLELIARLANGGMRDALSILEQCLAYNDDHLSIND--IHTIYGIVSMDDKTNLLKV 255 Query: 236 LNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAEL 277 L + L L D + + + D+ ++ ++ Sbjct: 256 LLSKNMSESLKIL-----DKMDKSGIDIKRLTFDLIDILKDI 292 >UniRef50_P43748 DNA polymerase III subunit delta' n=23 Tax=Pasteurellaceae RepID=HOLB_HAEIN Length = 327 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 111/318 (34%), Positives = 172/318 (54%), Gaps = 3/318 (0%) Query: 3 WYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHC 62 YPWL P + ++ ++ G GHHA+LI+A G+G ++L AL++ ++C QG K CG C Sbjct: 4 LYPWLMPIYHQIAQTFDEGLGHHAVLIKADSGLGVESLFNALAQKIMCV-AQGDKPCGQC 62 Query: 63 RGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD 122 C LMQA +HPDY+ L+P GK+ +GVD VR++ E + +HA+ G KVV+V A LT+ Sbjct: 63 HSCHLMQAHSHPDYHELSPINGKD-IGVDQVRDINEMVAQHAQQNGNKVVYVQGAERLTE 121 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM 182 AAANALLKTLEEP T+F L LLAT+ SRC++ L+ P E+ A WL + + Sbjct: 122 AAANALLKTLEEPRPNTYFLLQADSSASLLATIYSRCQVWNLSVPNEEIAFEWLKSKSAV 181 Query: 183 SQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAP 242 +L AL ++ G P AL Q + R+ + LL + E+ Sbjct: 182 ENQEILTALAMNLGRPLLALETLQEGFIEQRKNFLRQFWVFYRRRSPLELLPLFDKERYV 241 Query: 243 ARLHWLATLLMDALKRHHGAAQ-VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 ++ W+ L D LK D+ + + ++ + L + + +R L+ Sbjct: 242 QQVDWILAFLSDCLKHKLEIDSHRQVADLGRGIEQFSDEQTALGLLQAIKIMQKVRSDLL 301 Query: 302 SVTGINRELLITDLLLRI 319 ++ G+N EL++ D L R+ Sbjct: 302 TINGVNVELMLLDGLTRL 319 >UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHA0_BREBN Length = 565 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 82/352 (23%), Positives = 132/352 (37%), Gaps = 41/352 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P D L + + R HA L G G + +++ + C+QP Sbjct: 10 YRPQTFQDVVGQEHVTTTLRNALRENRLSHAYLFNGPRGTGKTSAAKIMAKAVNCEQPID 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G+ D + + GV+ +R++ +K+ KV + Sbjct: 70 GEPCNQCDTCRAISNGSVTDVLEI---DAASNRGVEEIRDIRDKVKFAPSDVRYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP+ F LAT EP +L AT+ SRC+ P + V Sbjct: 127 EVHMLTTEAFNALLKTLEEPPSHVIFILATTEPHKLPATIISRCQRFDFHRIPLRVMVDL 186 Query: 176 LSR-----EVTMSQDALLAALRLSAGSPGAALALFQ------------GDNWQARETLCQ 218 L R V + + AL +++ G AL+L D Q T+ Q Sbjct: 187 LQRICQSQGVQVEEQALQLVAKMAEGGARDALSLLDQAISYSKDEVRASDIMQITGTVAQ 246 Query: 219 A----LAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 + LA + D ++ + + LH D L V+ Sbjct: 247 SYFSVLARHIAENDIAQVMEQFDKVMVQGKDPEQFLHDFLYYYRDMLLLKTAPQLEEIVE 306 Query: 270 ---VPGLVAELANHLSPSRLQAILGDVCHIREQLM--SVTGINRELLITDLL 316 + AE+A S L A + QL + + EL + + Sbjct: 307 RTMIDDQFAEVAKLYSFPVLYAAIETCNQALSQLKWSTYARVLVELTLVKMC 358 >UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridium RepID=B8I549_CLOCE Length = 562 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 77/358 (21%), Positives = 134/358 (37%), Gaps = 46/358 (12%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + ++GR HA L G G + +R + C P+ Sbjct: 9 KWRPLVFEDVVEQEHVVRTIKNTVKSGRIAHAYLFCGTRGTGKTTMAKIFARAINCINPK 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + + D + + VD VRE+ +++ KV + Sbjct: 69 DGNPCNECEVCRGILDESILDVVEI---DAASNNSVDNVREIRDEVVYAPSQARYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F LAT +P +L AT+ SRC+ Sbjct: 126 DEVHMLSSGAFNALLKTLEEPPGHVVFILATTDPHKLPATILSRCQRFDFKKITPAGIAE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALF-----QGDNWQARETLCQALAYSV 224 + + + + D L RL+ G+ AL++ +G + + A+ + Sbjct: 186 RVKLIAQASGINIDDDGALLIARLADGALRDALSILDQCIAEGSTTITYQNVLDAIG--I 243 Query: 225 PSGDWYSL----LAALNHEQAPARLHWLATLLMDAL----------------KRHHGAAQ 264 S D+ S + + N E A + L+ D L K Sbjct: 244 VSDDFISEIVDNIESKNVEGLVASVEMLSAEGRDILRFASDLVLYFRNLLICKLSKNPEN 303 Query: 265 VTNVDVPGLVAELAN--HLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIE 320 + +V L +A + RL I+ ++ QL +N+ + + +L+ I Sbjct: 304 ILDVGKQYLDKMIAQSEAFTKERLIGIIKELSSFETQLK--YALNQRVFLEVMLISIS 359 >UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N1K9_SLAHD Length = 807 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 90/371 (24%), Positives = 135/371 (36%), Gaps = 46/371 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D L + Q HA L G G + L++ LLC+ Sbjct: 8 KYRPQTFDDVVGQTHVERTLKNALQQDHVSHAYLFCGPRGTGKTTMARLLAKALLCEHGP 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 G C CQL+ G HPD L + GVD VRE + ++ G K+ Sbjct: 68 TPSPDGTCEECQLIAEGAHPDVNEL---DAASRTGVDNVREEIIGRVQFAPTRGRYKIYI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT A NALLKTLEEPPA F + T +P+++ T+ SRC+ + V Sbjct: 125 IDEVHMLTVPAFNALLKTLEEPPAHVVFVMCTTDPQKIPETILSRCQRFDFHRLSNEEIV 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 + L + +V +AL R + G AL + + A S+ Sbjct: 185 SRLGAVCMAEDVPFEGEALDLIARRAQGGMRDALTALEQLIAFGAGNVTMDVANAALGSL 244 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDA--LKRHHGAAQV 265 D + + A A W LA+ + D GA + Sbjct: 245 DVNDMSEIAGHIGRRDAAACFTWMAEYVETGADLAQFARDLASYVRDMYVFSLTDGAVGL 304 Query: 266 --TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 + +AE A RL IL + + L S T N L L R+ + Sbjct: 305 SSASSSNQQQLAEDAKLYGTDRLAYILDVLGDLNTSLRSST--NPRLSFEIALTRM---V 359 Query: 324 QPGVVLPVPHL 334 +P L + L Sbjct: 360 RPQSDLTLEAL 370 >UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Tax=Reinekea blandensis MED297 RepID=A4BJR3_9GAMM Length = 677 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 74/302 (24%), Positives = 122/302 (40%), Gaps = 29/302 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + LV + R HHA L G+G + L++ L C+Q Sbjct: 9 KWRPGTFDEMVGQVHVLKALVNALDQERLHHAYLFTGTRGVGKTTIARLLAKSLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C+ + G D + + V+ RE+ E + G KV + Sbjct: 69 SSKPCGQCASCREIAEGRFVDLIEV---DAASRTKVEDTRELLENVQYAPTRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L ++ V Sbjct: 126 DEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKNMSREHIVQ 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAY---SVPS 226 L+ +V + +L A + GS AL+L QA+A+ ++ Sbjct: 186 HLNHILTVEQVPFDEPSLWAIAEGAQGSMRDALSLTD-----------QAIAFGHGALAE 234 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRL 286 + ++L ++ ++ + L D L D L+ EL + L + Sbjct: 235 QEVAAMLGTVDLKRVLNLVRALLQKDADGLLAMVSELDEHTPDYQTLLTELMSTLHRVAI 294 Query: 287 QA 288 Sbjct: 295 AQ 296 >UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIX1_HAHCH Length = 735 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 84/353 (23%), Positives = 133/353 (37%), Gaps = 41/353 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + R HHA L G+G + ++ L C+Q Sbjct: 9 KWRPGNFAEMAGQEHVLKALTNALNQDRLHHAYLFTGTRGVGKTTVARIFAKCLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ +RE+ + + K+ + Sbjct: 69 SAIPCGECGVCREIAEGRFVDLIEI---DAASRTKVEDMRELLDNVQYAPTRSRYKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L++++ NALLKTLEEPP F LAT +P++L T+ SRC L Q V+ Sbjct: 126 DEVHMLSNSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKNLSPQRIVS 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQALA--- 221 L + V + AL R + GS A++L GD + + + L Sbjct: 186 HLTHVLQAENVPAEEAALWELARAAEGSMRDAMSLTDQAIAFGDGKLEAKDVIEMLGTIE 245 Query: 222 --------YSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHHGAAQVTNV 268 ++ + D ++LA +NH L LA LL V N Sbjct: 246 KHVVIDLLRTIAAQDCAAMLAQVNHMAQFAPDYAYVLQALAELLHRVAVEQAVPGGVDNS 305 Query: 269 --DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D V+ELA L+ Q R+ L + LLR+ Sbjct: 306 FGDQQQ-VSELAQTLTAEDTQLYYQIALMGRKDLALAP--DPRTGFEMALLRM 355 >UniRef50_A3DH83 DNA polymerase III, delta prime subunit n=3 Tax=Clostridium thermocellum RepID=A3DH83_CLOTH Length = 329 Score = 293 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 123/322 (38%), Gaps = 11/322 (3%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + E L R HA + G+G + + L+C KSCG+CR C+ Sbjct: 9 QKSVVESLKRFIDNNRIGHAYIFSGPEGIGKSTVAKIFASILMCDDAAVDKSCGNCRSCR 68 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 L + T+PD+ L ++GVD +R + + + KV + +A +T A N Sbjct: 69 LFENRTNPDFGVLETRG--LSIGVDEIRNLQQDICIRPLYSKRKVYLIREAEKMTVQAQN 126 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDA 186 LLKTLEEPP LAT E LL T+RSR A ++ + Sbjct: 127 CLLKTLEEPPEYAVIILATSNYESLLETIRSRSVRINFAKNTFDEVKRFIVSRAGGDFEQ 186 Query: 187 LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLA-----ALNHEQA 241 + G G A+ L + + ++ A + D+ +L N E Sbjct: 187 ADFIAAYADGVIGRAVELMESERFKELREKAIDAAVRLSGSDFEDMLNISRMFDENKEDV 246 Query: 242 PARLHWLATLLMDALK--RHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 + L + D L + + N D ++ + A S +L + + R Sbjct: 247 DSILDVILLFYRDLLMAGKFGNEKLLINSDKKDIILKYAGRFSAGKLLNNIEIIEETRRN 306 Query: 300 LMSVTGINRELLITDLLLRIEH 321 + N +L + +L++++ Sbjct: 307 IKQ--NANYQLAVEVMLMKLQE 326 >UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseriaceae RepID=C5TP18_NEIFL Length = 666 Score = 293 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 82/333 (24%), Positives = 129/333 (38%), Gaps = 37/333 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + GR HHA L+ G+G + L++ L C+ Sbjct: 9 KWRPKTFADLVGQEHVVKALRNALDEGRLHHAYLLTGTRGVGKTTIARILAKSLNCENAV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C + +G + D + + G+D +REV E G KV + Sbjct: 69 HGEPCGQCESCTQIDSGRYVDLLEI---DAASNTGIDNIREVLENAQYAPTAGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPP F LAT +P ++ T+ SRC L Q Sbjct: 126 DEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPITVLSRCLQFVLRNMTTQQVAE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ V AL R +AGS AL+L + + E + + +V Sbjct: 186 HLAHVLDRENVPYQPQALQLLGRAAAGSMRDALSLLDQAIAMGSGKVAEQDVRQMIGAVD 245 Query: 226 SGDWYSLLAALNHEQAPARLH-----------------WLATLLMDALKRHHGAAQVTNV 268 + LL + ++ A L LA LL + + N Sbjct: 246 KQYLFELLEGIINQNGEALLEKAQEMSARAIGFDSALAELAMLLQRLALIQTIPSALAND 305 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQL 300 D + L+ LS ++Q H ++ L Sbjct: 306 DPERETLLRLSQALSGEQIQLYYQCAIHGKQDL 338 >UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y576_9FIRM Length = 613 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 77/327 (23%), Positives = 133/327 (40%), Gaps = 30/327 (9%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + L + + + HA L G G + L++ + C+ Q + C CR C Sbjct: 21 QQHIVTTLKNAVKQNKIAHAYLFCGPRGTGKTTIAKLLAKAVNCED-QQNAPCNQCRSCL 79 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 +Q G HPD + + GVD VRE+ EK+ G KV + + +++ A N Sbjct: 80 AIQQGNHPDIVEI---DAASNNGVDEVRELIEKVKYAPLEGRYKVYIIDEVHMMSSGAFN 136 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVT 181 ALLKTLEEPP+ F LAT EP+++L T+ SRC+ + + + +T + + Sbjct: 137 ALLKTLEEPPSHVIFILATTEPQKVLPTIISRCQRYDFSKVGQNEIITRVRCVLEQEHIE 196 Query: 182 MSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS---VPSGDWYSLLAALNH 238 +AL +L+ G AL++ Q +AY+ + + + Sbjct: 197 CEDEALRLVAQLADGGMRDALSIMD-----------QCIAYAQNHITAAHVNEIYGITTV 245 Query: 239 EQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 + L W+ +L VD+ L ++L L + DV + + Sbjct: 246 SEKIEMLQWIFQHQAQSLLEKIRLLNEKGVDIKRLTSDLIEILKECVIFIYTQDVTLLNK 305 Query: 299 QLMSVTG--INRE-----LLITDLLLR 318 + IN + L + D+L+ Sbjct: 306 INETEANAIINGKSSRDLLALIDILME 332 >UniRef50_B9L692 DNA polymerase III, subunits gamma and tau n=1 Tax=Nautilia profundicola AmH RepID=B9L692_NAUPA Length = 493 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 74/349 (21%), Positives = 129/349 (36%), Gaps = 42/349 (12%) Query: 1 MRWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P + LV S R HA L L G G ++ L C Sbjct: 5 LKYRPKRFEEIIGQDAIVKTLVNSLDKNRIAHAYLFSGLRGAGKTTTARIFAKALQCDHG 64 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 C C C + H D + + ++ +RE+ E +G K+ Sbjct: 65 PTSNPCEECENCIMANESRHIDIIEM---DAASNRKIEDIRELIEHTKYKPSVGKYKIFI 121 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT+ A NALLKTLEEPP F +AT +P +L AT+ SR + Sbjct: 122 IDEVHMLTNEAFNALLKTLEEPPEYVKFIMATTDPLKLPATILSRVQHFRFNKIKNGIIE 181 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS---VP 225 +L V ++AL ++ + GS +L L L QA+A+S + Sbjct: 182 NYLIKILAIENVEFDEEALRLIIKAAKGSVRDSLTL-----------LDQAIAFSKGKID 230 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE--------- 276 +L +N E + D + ++ + D+ ++ E Sbjct: 231 LDSVVDMLGVINPEIINEIFDAVKN--SDKKRIKEIVGEIKDYDIESIIDEVIIYLKDAL 288 Query: 277 LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 L +Q V ++E + + E ++T + LR+ ++P Sbjct: 289 FEGSLPLITVQRFFNIVADVKELIK--YNTDNEFVLTLMFLRMSEAVKP 335 >UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8U6_TOLAT Length = 760 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 80/306 (26%), Positives = 127/306 (41%), Gaps = 29/306 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + L + GR HHA L G+G + L++ L C+ Sbjct: 9 KWRPRNFHEVMGQQHVLQALSNALDQGRLHHAYLFSGTRGVGKTTIARILAKCLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + G D + + V+ R++ + + G K+ + Sbjct: 69 TSRPCGQCSACREIDQGNFVDLLEI---DAASRTKVEDTRDLLDNVQYKPARGRFKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + V Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALTREQIVE 185 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAY---SVPS 226 L R ++T AL + + GS AL+L QA+AY + + Sbjct: 186 QLQRVLQAEQLTYEPAALSLLAKAAQGSMRDALSLSD-----------QAIAYGNGLLQA 234 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRL 286 +L L+H Q L LA AL + G+ D L ELA+ L + + Sbjct: 235 ETVQQMLGTLDHRQLYQILSLLAARDGAALMQQIGSLAELAPDYDQLHVELASLLHRTAM 294 Query: 287 QAILGD 292 +LG Sbjct: 295 WQLLGQ 300 >UniRef50_C5BU66 DNA polymerase III subunit delta prime n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BU66_TERTT Length = 339 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 100/325 (30%), Positives = 162/325 (49%), Gaps = 13/325 (4%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPW + + G HA+L+Q + G+G ++L A++ +L+C P +CG C+ Sbjct: 8 YPWQNTYWHQFAGQVTQGHLPHAILLQGVAGIGTESLARAMAEFLMCSSPVEQAACGQCK 67 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C+L+Q+ HPD + L+PE+ + VD VR++TE + + ++ GG K+V + A + A Sbjct: 68 VCRLLQSHNHPDLFLLSPEEKSVVIKVDQVRQLTEFVAKTSQQGGRKLVIIEPAEAMNIA 127 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANALLK EEP +T F L RLL T+RSRC H L P AV+WL TM Sbjct: 128 AANALLKCFEEPSGDTVFILVCHHANRLLPTIRSRCACHTLPVPERALAVSWLE---TMG 184 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNH----- 238 ++ L + G+P A + D +++ C+ L ++ + + +A Sbjct: 185 VESAALLLDETHGAPLTAHQWSRDDVIASQDKACELLVAALQTQKPVTTVAGTLAGECSG 244 Query: 239 -EQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIR 297 E A ++WL L+ + R G+ + LV +A LS L + C + Sbjct: 245 LELAELLINWLEQLIRE---RTRGSRRSLLAHWEPLVG-VAQALSTVELFKLREVYCQRK 300 Query: 298 EQLMSVTGINRELLITDLLLRIEHY 322 QL++ +N ++I DLLL + Y Sbjct: 301 AQLLANPNLNANMVIEDLLLEWQRY 325 >UniRef50_P52024 DNA polymerase III subunit delta' n=22 Tax=Pseudomonadaceae RepID=HOLB_PSEAE Length = 328 Score = 292 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 100/327 (30%), Positives = 159/327 (48%), Gaps = 7/327 (2%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPW + + +L Q HA L+ G+G AL + LLCQ+P +CG C+ Sbjct: 5 YPWQQALWSQLGGRAQH---AHAYLLYGPAGIGKRALAEHWAAQLLCQRPAAAGACGECK 61 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 CQL+ AGTHPDY+ L PE+ + + VD VR++ + + A+LGG KVV + A + Sbjct: 62 ACQLLAAGTHPDYFVLEPEEAEKPIRVDQVRDLVGFVVQTAQLGGRKVVLLEPAEAMNVN 121 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANALLK+LEEP +T L + +P RLL T++SRC P ++ WL+R + Sbjct: 122 AANALLKSLEEPSGDTVLLLISHQPSRLLPTIKSRCVQQACPLPGAAASLEWLARALPDE 181 Query: 184 Q-DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYS-LLAALNHEQA 241 +AL L LS GSP A L + R + + + + S L + N Sbjct: 182 PAEALEELLALSGGSPLTAQRLHGQGVREQRAQVVEGVKKLLKQQIAASPLAESWNSVPL 241 Query: 242 PARLHWLATLLMDALKRH--HGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 P W + L+ H + D+ ++ L + +++ A+ + R++ Sbjct: 242 PLLFDWFCDWTLGILRYQLTHDEEGLGLADMRKVIQYLGDKSGQAKVLAMQDWLLQQRQK 301 Query: 300 LMSVTGINRELLITDLLLRIEHYLQPG 326 +++ +NR LL+ LL++ PG Sbjct: 302 VLNKANLNRVLLLEALLVQWASLPGPG 328 >UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridiales RepID=C4ZB56_EUBR3 Length = 523 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 123/325 (37%), Gaps = 31/325 (9%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L +A R HA L G G + ++ + C+ P Sbjct: 9 KFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTVAKIFAKAVNCEHPV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G+ + + + GVD +R++ E++ G KV + Sbjct: 69 DGSPCGECPSCRAITEGSSMNVIEI---DAASNNGVDNIRQIREEVTYRPTEGRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP+ F LAT E ++ T+ SRC+ + + Sbjct: 126 DEVHMLSAGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFHRISIDTIAS 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 L V + + A+ + GS AL+L + + L + + Sbjct: 186 RLSDLMEQEHVEVEERAIRYVAKAGDGSMRDALSLLD-------QCIAFHLGEKLTYENV 238 Query: 230 YSLLAALNHEQAPARLHWLAT--------LLMDALKRHHGAAQVTNVDVPGLVAELANHL 281 +L A++ E L + +L + + +Q+ N D + L Sbjct: 239 LEVLGAVDTEVFSRLLRRILDEDVTGAIRILGELIDEGRELSQLVN-DFTWYMRNLLLLQ 297 Query: 282 SPSRLQAILGDVCHIREQLMSVTGI 306 S ++ +L E L + Sbjct: 298 SSDDMEEVLDISKDNLEALKEEAAL 322 >UniRef50_B5FFM6 DNA polymerase III subunit tau n=2 Tax=Vibrio fischeri RepID=B5FFM6_VIBFM Length = 709 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 128/352 (36%), Gaps = 39/352 (11%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + R HHA L G+G + ++ L C++ Sbjct: 9 KWRPHHFKDVVGQPHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAKGLNCEEGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ RE+ + + G KV + Sbjct: 69 TSTPCGVCSTCKEIDEGRFVDLLEI---DAASRTKVEDTRELLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKHISVDQIHE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L EV+ AL + GS AL+L N + A+ ++ Sbjct: 186 QLDFVLDKEEVSKEARALGLIAHAADGSMRDALSLTDQAIALGNGSVTAEIVSAMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDV--------------- 270 + +L A++ + ++ + L ++ A ++ N Sbjct: 246 TDQAIRILEAISTKNMQTLMNCVNDLADIGVEWDGLAKELANQLHKLAMYQALPATLDKT 305 Query: 271 ---PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + L+ LSP +Q V R+ L N +LLR+ Sbjct: 306 QPDAERIELLSTQLSPQEVQLFYQIVLQSRKDLPLAP--NERTGAEMMLLRM 355 >UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Coriobacteriaceae RepID=C7MLT3_CRYCD Length = 900 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 94/371 (25%), Positives = 150/371 (40%), Gaps = 47/371 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + D L + + + HA L G G + L++ LLC++ Sbjct: 8 KYRPQVFGDVVGQEHIERTLKNAIEQDKVSHAYLFCGPRGTGKTTMARLLAKALLCEKGP 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 + G CR CQ + G HPD Y L + GV+ VRE + ++N G AK+ Sbjct: 68 TSEPDGSCRECQEIAEGVHPDVYEL---DAASRTGVENVREEIIGRVNFAPTRGKAKIYI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ AA NALLKTLEEPPA F L T +P+++ T+ SRC+ + V Sbjct: 125 IDEVHMLSIAAFNALLKTLEEPPAHVVFILCTTDPQKVPETIHSRCQRFDFHRLSNEEIV 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 + L + V +AL + G AL + + + L S+ Sbjct: 185 SRLGAVCVAENVEFEGEALDLIAHRADGGMRNALTALEQLIAFGEGKVTVAGAEDLLGSL 244 Query: 225 PSGDWYSLLAALNHEQAPARLHW----------LATLLMDA-----------LKRHHGAA 263 S D ++AA+ A A W LA D L A Sbjct: 245 DSSDLAEIMAAVGVRDAAACFSWVASYVETGADLAQFTRDMAQQVRNLYVMSLAGTDAAL 304 Query: 264 QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 VT+ + L +EL P+RL +L + + +L + + N+ L L R+ + Sbjct: 305 DVTDAERRELASEL-KLFGPNRLTHLLSILGELSSELRTAS--NQRLAFEIALTRM---I 358 Query: 324 QPGVVLPVPHL 334 +P L + L Sbjct: 359 RPESDLTLEAL 369 >UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 Tax=Pseudomonadaceae RepID=Q48KQ6_PSE14 Length = 737 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 78/351 (22%), Positives = 130/351 (37%), Gaps = 39/351 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L+ + + R HHA L G+G + +++ L C+ Sbjct: 9 KWRPRSFREMVGQAHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAKCLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ RE+ + + G KV + Sbjct: 69 TSTPCGTCSVCKEIDEGRFVDLIEI---DAASRTKVEDTRELLDNVQYAPSRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L AT+ SRC L + V Sbjct: 126 DEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTPERVVE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ V DAL R + GS A++L + +A+ ++ Sbjct: 186 HLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE--------- 276 G + +L AL A L + L + +++ NV +A+ Sbjct: 246 HGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPEGVDNG 305 Query: 277 ---------LANHLSPSRLQAILGDVCHIREQLMSVTGIN--RELLITDLL 316 LA L +Q R L E+++ +L Sbjct: 306 HGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRML 356 >UniRef50_A3YHQ6 DNA polymerase III subunits gamma and tau n=1 Tax=Marinomonas sp. MED121 RepID=A3YHQ6_9GAMM Length = 823 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 84/353 (23%), Positives = 130/353 (36%), Gaps = 40/353 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ-QP 53 +W P + LV + + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPQNFIELAGQDHVLQALVNALKQQRLHHAYLFTGTRGVGKTTIARIFAKCLNCETNG 68 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + CG C C + G D + + V+ RE+ E + G KV Sbjct: 69 ISPEPCGTCGSCVEIAEGRFVDLIEV---DAASRTKVEDTRELLENVQYTPTRGRFKVYL 125 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ + NALLKTLEEPPA F LAT +P++L T+ SRC L V Sbjct: 126 IDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMSPGRVV 185 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 +L +++ + L + + GS AL+L N ET ++ V Sbjct: 186 NYLEKVLTTEQLSYDEAGLWQIGQAANGSMRDALSLTDQAIAFGNGHISETDVTSMLGLV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATL-------------LMDALKRHHGAAQVTNV--D 269 LL A+ A L + L L+D L R QV D Sbjct: 246 NQAQVVGLLDAIVQSDAANLLKLVNDLADYQPDFVAICASLLDLLHRIAIEQQVPGALED 305 Query: 270 VPGLVAE---LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 G +A+ +A + +Q + + L LLLR+ Sbjct: 306 QLGDLAKVKLIAQQVPSEVIQLFYQTMLIGKRDLPLAHSPKAG--FEMLLLRL 356 >UniRef50_C4GC81 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GC81_9FIRM Length = 330 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 133/316 (42%), Gaps = 12/316 (3%) Query: 13 KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT 72 L + Q + HA +I G G L A ++ LLC++ +G +CGHC C+ + Sbjct: 15 HLQNALQNQKVSHAYIISGEEGSGKRMLAEAFAQTLLCEE-KGADACGHCHHCRQTMSHN 73 Query: 73 HPDYYTLAPEKGKNTLGVDAVR-EVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 PD L EK T+ VD +R ++ + KV V +A + + A NALLKT Sbjct: 74 QPDIIYLTHEKPA-TISVDDIRSQINSDIVIRPYNSDYKVYIVDEAEKMNEQAQNALLKT 132 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAAL 191 +EEPP+ L T + L T+RSRC L P P+ L + + ++ Sbjct: 133 IEEPPSYAVILLLTTNAQAFLPTIRSRCILLETKPVPDALVRGELMKRYEIPDYQADMSV 192 Query: 192 RLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAAL-----NHEQAPARLH 246 + G+ G A+AL Q + R+ + +L + + +A + E L Sbjct: 193 AFAQGNMGKAIALAQSQEFADRKEMVLSLIRHISEMTYADRIAWIREMEAKKEPLTDYLD 252 Query: 247 WLATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 L D L K A ++ D V LA+ LS L+ I V R Sbjct: 253 LLMVFYRDVLLYKATGQADRLIFADQVYQVKRLADGLSYRHLEEIFEGVESCRR--KDAA 310 Query: 305 GINRELLITDLLLRIE 320 +N +L++ L+ R+ Sbjct: 311 NVNTDLILQQLMERMR 326 >UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 Tax=cellular organisms RepID=A3D5Q4_SHEB5 Length = 1147 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 116/332 (34%), Gaps = 36/332 (10%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 36 KWRPATFDQMVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGV 95 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 96 TATPCGACGSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 152 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L + T Sbjct: 153 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQGEIGT 212 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + +A+ + + GS AL+L T Q + S+ Sbjct: 213 QLNHILTQEQFPFDAEAIKLLAKAANGSMRDALSLTDQAIAFGGGNVMLTQVQTMLGSID 272 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 +LL AL A L L LL A Sbjct: 273 EQHVVALLKALTDADIGVLMHTCAQVLAYGADAQEVLRSLLELLHQITLTQFAPAAAQQS 332 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + A L+P ++Q + R+ L Sbjct: 333 LYSAQIRAFAEQLTPEQVQLYYQILLTGRKDL 364 >UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG9_9FIRM Length = 587 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 71/349 (20%), Positives = 126/349 (36%), Gaps = 45/349 (12%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + L + R HA L G G ++ ++ L C Q CG C C+ Sbjct: 21 QTHIIQTLKNAIIQNRIAHAYLFCGPRGTGKTSIAKIFAKTLNCTNSQDA-PCGVCENCK 79 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + G+HPD + + GVD VR + +K+ G K+ + + ++T A N Sbjct: 80 MAANGSHPDIIEI---DAASNNGVDEVRNLIDKVKYAPMQGKYKIYIIDEVHMMTSGAFN 136 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REVT 181 ALLKT+EEPPA F AT EP ++L T+ SRC+ LS + Sbjct: 137 ALLKTIEEPPAHVIFIFATTEPNKVLPTIISRCQRFDFNKVSVNDIKYRLSVVCKNEGIE 196 Query: 182 MSQDALLAALRLSAGSPGAALALFQG---------DNWQARETLCQALAYSVPSGDWYSL 232 + QD L +L+ G AL++ D R+ + + S D L Sbjct: 197 IDQDGLTLIAQLADGGMRDALSILDQCVAYCTSHIDVNDIRK-----IYGVITSEDIGQL 251 Query: 233 LAALNHEQAPARLHWLA-----------------TLLMDALKRHHGAAQVTNVDV-PGLV 274 +++ + + + +L D+L + D+ ++ Sbjct: 252 FSSIYKKDVDRFIKDIQKYSDMGMDIKRLTADFIHMLKDSLILDYSENSTLVSDMNKDMI 311 Query: 275 AELANHLSPSRLQAILGDVCHIREQLMSVTG-INRELLITDLLLRIEHY 322 + + ++ + + ++ + LL+I Y Sbjct: 312 RKYFKSAPIHFRIQCMEELMDTYNKYTYASNALDY---LEASLLKISSY 357 >UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N205_9FIRM Length = 640 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 79/343 (23%), Positives = 128/343 (37%), Gaps = 33/343 (9%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 L + + R HA L G G + L++ L C + C C C+ Sbjct: 21 QEHIVTTLKNAIKENRISHAYLFAGPRGTGKTTVAKLLAKALNCTG--ENPPCDQCPNCK 78 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + G HPD + + GVD VR++ +K+ G KV + + +++ A N Sbjct: 79 AITVGEHPDVIEI---DAASNNGVDEVRDLIDKVKYAPINGKYKVYIIDEVHMMSTGAFN 135 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REVT 181 ALLKTLEEPPA F LAT EP ++L T+ SRC+ ++ L Sbjct: 136 ALLKTLEEPPAHIVFVLATTEPHKILPTIISRCQRFDFKKVENHDIISRLEYVLKSENKK 195 Query: 182 MSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQA--LAYSVPSGD-WYSLLAALNH 238 AL + +L+ G AL++ + E ++ + Y + S D S + L Sbjct: 196 YELSALESVAKLAEGGMRDALSILEQCLAYNNELTVESVNMVYGLLSMDNKISFIKQLLS 255 Query: 239 EQAPARLHWLATL-------------LMDALK-----RHHGAAQVTNVDVPGLVAELANH 280 + L L + L+D LK ++ + V V LA + Sbjct: 256 KDIKGVLTSLDNMLSGSIDIKRLTFDLVDVLKDIIIYKNTQDVSILFVLTQQDVDNLAPY 315 Query: 281 LSPSRLQAILGDVCHIREQLMSVTGINR--ELLITDLLLRIEH 321 + I+ + N EL + + RI+ Sbjct: 316 ILVEEAFEIIDILIEASSHYSQSLDANTYFELAMLKICNRIKE 358 >UniRef50_C5S6L9 DNA polymerase III, delta prime subunit n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S6L9_CHRVI Length = 359 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 108/325 (33%), Positives = 152/325 (46%), Gaps = 11/325 (3%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHK-SCGHCR 63 PW + +L A+ A R H LLI G+G AL AL++ LLCQ P +CG C Sbjct: 26 PWTDAIWSRLQAARAADRLAHGLLISGPNGVGKRALARALAQSLLCQTPSAQGLACGQCA 85 Query: 64 GCQLMQAGTHPDYYTL--APEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 C+L+ AG+HPD + PE + +DAVR E+ + KVV + A L Sbjct: 86 DCRLLAAGSHPDLIEVGPDPESKSGEIPIDAVRLFAERESLTPSRALFKVVLIDPADRLN 145 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT 181 AAANALLKTLEEP T L RL AT+RSRC L + P E A++WL+ Sbjct: 146 QAAANALLKTLEEPTGHTVLCLIGERIGRLPATIRSRCLLIPVPIPDEAQALSWLASRAP 205 Query: 182 MSQDALLAALRLSAGSPGAALAL-FQGDNWQAR-ETLCQALAYSVPSGDWYSLLAALNHE 239 + L LRL+ G+P ALA + R + L L + GD ++ N Sbjct: 206 RADWPLR--LRLAHGAPLRALAEAADSARLEQRGQCLDGLLEIARGRGDPVTIAGRWNEI 263 Query: 240 QAPARLHWLATLLMDALKRHHGAA--QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIR 297 A L WLA ++ D L+ A ++ + D +A LA L P+ L + R Sbjct: 264 GAGRILDWLAGIMGDLLRLGVCATPPRLDHPDRQDDLAALAQRLDPAAAHRFLKRILETR 323 Query: 298 EQLMSVTGINRELLITDLLLRIEHY 322 + + +N++LL+ L L Sbjct: 324 A--LGESNLNQQLLLESLALDWARI 346 >UniRef50_A5F6P8 DNA polymerase III, delta prime subunit n=35 Tax=Vibrio RepID=A5F6P8_VIBC3 Length = 324 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 104/322 (32%), Positives = 155/322 (48%), Gaps = 10/322 (3%) Query: 2 RWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGH 61 YPWL P ++ A AG+ A LIQA G+G ++L+ ++R L+C Q + CG Sbjct: 6 SLYPWLVPVWQPWQAGLAAGKISSATLIQASEGVGVESLVELMARTLMCTSSQ-SEPCGF 64 Query: 62 CRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 C C LMQ+G HPD++ + PEK ++ V+ +R++ E ++L G +++ + A + Sbjct: 65 CHSCGLMQSGNHPDFHVVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPADAMN 124 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT 181 +++ANALLKTLEEP F L T + LL T+ SRC+ L P V WL + Sbjct: 125 ESSANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVVEWLKGQGI 184 Query: 182 MSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLA--ALNHE 239 + AL L A SP A + L L ++ SGD + L AL Sbjct: 185 TTP---AYALHLCADSPLKTRAFMLEGGAEKYHELESQLMNAL-SGDVNAQLKCIALIDA 240 Query: 240 QAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 L+W+ +L DA K H G Q P A LA + S+L + + EQ Sbjct: 241 DLTTHLYWVWCVLTDAQKIHFGVQQDY---YPPASAALAGRFTYSKLHVQTASLERLMEQ 297 Query: 300 LMSVTGINRELLITDLLLRIEH 321 L +G+N ELL+ L + Sbjct: 298 LNQFSGLNTELLLLQWLYQFSD 319 >UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S561_SHEAM Length = 909 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 121/336 (36%), Gaps = 36/336 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 9 KWRPANFAEVVGQSHVLHALTNALGQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + VD RE+ + + G KV + Sbjct: 69 TATPCGQCSACREIAEGRFVDLIEV---DAASRTKVDDTREILDNVQYRPSRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L + Sbjct: 126 DEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKALTQPQIQA 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ + +DAL + +AGS AL+L + R Q + ++ Sbjct: 186 QLAAVLSGEGLGFDEDALSLLAKAAAGSMRDALSLTDQAIAFGGGEVRLAQVQTMLGAID 245 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 G +L AL A L L LL A + Sbjct: 246 KGQILNLFDALCQGDIETLLTTARTAMGFGADADEVLRALLELLHQISLAQFAPATASIS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 D V A L P ++Q + R+ L Sbjct: 306 DNGAAVLAWAQALKPEQVQLYYQILLSGRKDLPYAP 341 >UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q0VNM5_ALCBS Length = 615 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 88/356 (24%), Positives = 135/356 (37%), Gaps = 34/356 (9%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L+ + R HHA L G+G + LSR L C+Q Sbjct: 9 KYRPRTFDELVGQEHVSRALMHALDQDRLHHAYLFTGTRGVGKTTIARILSRCLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C CQ + G D + + V+ RE+ + + G KV + Sbjct: 69 SARPCGVCPTCQEITDGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L P + Sbjct: 126 DEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKALPAEQIAG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + ALL+ + + GS AL+L Q A+ +V Sbjct: 186 HLKTLLDKEMIRYDEPALLSLGKAAEGSMRDALSLTDQAIAFGGEQLSSEAVNAMLGTVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL---------LMDAL---KRHHGAAQVTNVDVPGL 273 +LL AL ++ L LA++ L+D L Q Sbjct: 246 RNHVLTLLVALAEQEPGGVLQALASVSEHCPGELALLDELISQLHQLAVCQAVPGSYDET 305 Query: 274 VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVL 329 +LA L+ ++Q R L + + LLLR+ P VL Sbjct: 306 QQQLAAALTAEQIQLYYDVALRGRRDLQDAP--DSRAALEMLLLRM-VLFTPKGVL 358 >UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD56_9FIRM Length = 628 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 72/303 (23%), Positives = 115/303 (37%), Gaps = 32/303 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 W P + L + ++GR HA L G G + L++ L C++ Sbjct: 9 TWRPQDFDGLVGQEHIRKALTNALESGRISHAYLFTGPRGTGKTSTARILAKALNCEKGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + GT D + + G+D +R++ E+++ KV + Sbjct: 69 TPHPCNTCDHCREITEGTSADVIEI---DAASNRGIDEIRKLREQVHFAPVSSRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + ++T A NALLKTLEEPP F LAT EP+++ T+ SRC+ Sbjct: 126 DEVHMITADAFNALLKTLEEPPEHVVFILATTEPQKIPTTIHSRCQRFDFRRVTVDDIAA 185 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + DAL + G A+ L N ET+ Q L + Sbjct: 186 HLQKVAEGSNINAEPDALRLMAIQADGGMRDAVGLLDQCSIMANPVTAETVRQVLGIA-G 244 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 +L+ + PA L L L+ D DV ++ EL ++ Sbjct: 245 RDTMRALVEKIGRRDLPAALDLLNQLMDDG------------KDVTQVLTELLEYMRALL 292 Query: 286 LQA 288 L Sbjct: 293 LYQ 295 >UniRef50_B0MFK9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MFK9_9FIRM Length = 335 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 80/323 (24%), Positives = 133/323 (41%), Gaps = 15/323 (4%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + + + Q G+ HA L+ G G L A ++ LLC++ H+ CG C C+ Sbjct: 15 HKKIIQHFEEAIQTGQISHAYLLNGEDGSGKMTLAKAFAKALLCEK---HEGCGQCTPCR 71 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAA 125 G HPD + EK + VD +R+ + E ++ K+ V DA + A Sbjct: 72 QADTGNHPDLIYITHEKY--EIRVDEIRQGINETIDIKPYSSNYKIYIVDDADRMNVGAQ 129 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQD 185 NALLKTLEEPP L T +RLL T+ SRC L PE +L +D Sbjct: 130 NALLKTLEEPPEYAVILLLTNNKDRLLETILSRCVCMSLGTVPEDQIRDYLKEHTQADED 189 Query: 186 ALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALN-----HEQ 240 + A+ S G+ G A+ + + + + + + + +++ L EQ Sbjct: 190 MIDFAVSFSLGNLGKAVHVAETKEFHEMLNEALGMLGYIHHIELHEMISYLKTLTKYKEQ 249 Query: 241 APARLHWLATLLMD--ALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 L + D LK + D + E +++ L I+ ++ R Sbjct: 250 IYDFLDIMTDWYRDMLILKTTGSVNLLIFKDKYRQLKEQEIYITFEGLTHIMDEIQKARV 309 Query: 299 QLMSVTGINRELLITDLLLRIEH 321 +L +N E+ + LLL ++ Sbjct: 310 RL--NANVNFEVTMEMLLLTMKE 330 >UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina loihiensis RepID=Q5QWS2_IDILO Length = 681 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 79/351 (22%), Positives = 130/351 (37%), Gaps = 38/351 (10%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + L + R HHA L G+G + L++ L C++ Sbjct: 9 KWRPSQFAEVVGQQHVLKPLEHALDKQRLHHAYLFTGTRGVGKTTIARILAKALNCEEGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C ++ G D + + V+ RE+ + + G KV + Sbjct: 69 TATPCGKCSACLEIEQGRFVDLLEI---DAASRTKVEDTRELLDNVQYRPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKALSNDDITQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 L +V +AL R + GS AL+L + + +VP Sbjct: 186 QLSYVLSQEQVQADSEALPLLARSARGSMRDALSLTDQAIAQGGGSVSIDSVRRMLGNVP 245 Query: 226 SGDWYSLLAALNHEQAPARLHW----------LATLLMDALKRHHGAAQVTNVDVP---- 271 D +LL ++ A A + L+++L++ H A V V Sbjct: 246 VADIAALLESVLEGDAEAVMQRVDSMVSMVPDLSSVLVELQSLLHQLALVQQVPSAANVF 305 Query: 272 ---GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 ++ L + +Q V R + I+ + LLR+ Sbjct: 306 ENSDVLKPLLRRMPAELIQVFYRTVLEGRRE--QAYAIDARSGLEMTLLRL 354 >UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15RT3_PSEA6 Length = 914 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 118/312 (37%), Gaps = 31/312 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + R HHA L G+G + S+ L C+ Sbjct: 9 KWRPNNFSELVGQEHVVAAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSKSLNCELGM 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G K CG C C ++ G D + + V+ RE+ + + G KV + Sbjct: 69 GSKPCGKCSTCVEIEQGNFVDLLEI---DAASRTKVEDTRELLDNVQYRPSRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSRAQIAQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 L ++ + +AL R + GS AL+L N ++ + + Sbjct: 186 QLQHVFAQEQLQNAPEALAQIARAAQGSMRDALSLSDQAIAQGNGNVSLSIVTDMLGLMD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 LL A+ ++Q + L+D + VD ++ EL + L Sbjct: 246 KTQVLKLLNAVLNKQNESVFE-----LVDFMSEQA-------VDYSQVLNELMSLLHQVA 293 Query: 286 LQAILGDVCHIR 297 L + D C + Sbjct: 294 LTQFVPDACKLE 305 >UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 Tax=Bacteria RepID=C9L9Q0_RUMHA Length = 538 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 72/356 (20%), Positives = 133/356 (37%), Gaps = 43/356 (12%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L +A R HA L G G + L+R + C+ P Sbjct: 9 KFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKILARAVNCEHPV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C+ C+ + GT + + + GVD +RE+ E++ G KV + Sbjct: 69 DGSPCNTCKTCRAINEGTSMNVIEI---DAASNNGVDNIREIREEVAYRPTTGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP+ F LAT E ++ T+ SRC+ + Sbjct: 126 DEVHMLSTGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRITADTIAA 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD--------------------- 208 L + + A+ + + GS AL+L Sbjct: 186 RLQELMDKEGNDVEEKAIRYIAKAADGSMRDALSLLDQCIAFYLGEKLTYEKVLENLGAV 245 Query: 209 -----NWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAA 263 + R+ L Q A ++ + D + + + +L LL+ + H A Sbjct: 246 DTQVFSRMLRQILQQDTAGTIKTLDEIIIQGRELGQFVTDFIWYLRNLLLISTSEHPEEA 305 Query: 264 QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + + + E ++ + L + + Q+ + + +L+ L+++ Sbjct: 306 VDASAENLERMKEESSMVDAETLMRYIRIFSELSNQIKYASQ--KRVLVEIALIKL 359 >UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 Tax=Xanthomonadaceae RepID=B0RYK4_XANCB Length = 752 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 79/308 (25%), Positives = 123/308 (39%), Gaps = 31/308 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + +GR HHA L G+G + ++ L C+ Sbjct: 108 KWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAKSLNCETGT 167 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + AG + D + + GVD VREV E G KV + Sbjct: 168 SADPCGTCPACLDIDAGRYIDLLEI---DAASNTGVDDVREVIENAQYMPSRGKFKVYLI 224 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPP F LAT +P++L T+ SRC L E Sbjct: 225 DEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDEDQIQG 284 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 + + E+ A++ + + GS L+L RE + + + +V Sbjct: 285 QMTRILAAEEIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTMLGTVD 344 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 ++L AL+ L +A L + D G++ LA L + Sbjct: 345 RTQVGAMLQALSDGDGAQLLKVVAAL------------AEFSPDWSGVLEALAEALHRIQ 392 Query: 286 LQAILGDV 293 +Q ++ V Sbjct: 393 VQQLVPSV 400 >UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 Tax=Gammaproteobacteria RepID=Q0HHZ2_SHESM Length = 1071 Score = 290 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 117/332 (35%), Gaps = 36/332 (10%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C++ Sbjct: 9 KWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEKGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TASPCGVCGSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L +Q T Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQQEIGT 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +AL + + GS AL+L Q++ S+ Sbjct: 186 QLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSMLGSID 245 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 LL AL A L L LL A Sbjct: 246 EQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPAAAQQS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + A L+P ++Q + R+ L Sbjct: 306 LYSAQIQAFAEQLAPEQVQLYYQILLTGRKDL 337 >UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 Tax=Staphylococcus RepID=B9DLF5_STACT Length = 583 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 72/347 (20%), Positives = 131/347 (37%), Gaps = 26/347 (7%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P D + L + G+ HA + G G ++ ++ + C Sbjct: 10 YRPQSFDDVVGQEHVTKTLRNAIAKGKQSHAYIFSGPRGTGKTSIAKVFAKAINCPNSVD 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G++ D + + GVD +R + +K+ KV + Sbjct: 70 GEPCNECDICKSITQGSNSDVIEI---DAASNNGVDEIRNIRDKVKYAPSQSKYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPPA F LAT EP ++ T+ SR + + Sbjct: 127 EVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGLDQIIER 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQG--DNWQARETLCQAL--AYSVPS 226 L S+ + +A+ + S G AL++ TL AL SV Sbjct: 187 LRYVAESQHIEYDDEAIAFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALNVTGSVDE 246 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANH------ 280 +LL + + Q + + + + + ++ + A Sbjct: 247 ASLNALLNDVANGQVKDAFARYHQFIAEGKEVNRLINDLIYFVRDTIMNKTAQRETEYDA 306 Query: 281 LSPSRLQAILGDVCHIREQLMSVT-GINRELLITDLLLRIEHYLQPG 326 L L + + I + L+SV +N+ + LL+++ ++ G Sbjct: 307 LMAFDLDTLYKMIDLINDTLVSVRFSVNQNVHFEVLLVKMAELIKEG 353 >UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 Tax=Proteobacteria RepID=A3NA70_BURP6 Length = 826 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 89/347 (25%), Positives = 128/347 (36%), Gaps = 51/347 (14%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L G+G L ++ L C+ Sbjct: 9 KWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAKALNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG CR C+ + G DY + + GVD + + E+ KV + Sbjct: 69 TSQPCGVCRACREIDEGRFVDYVEM---DAASNRGVDEMAALLERAVYAPVDARFKVYMI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NA+LKTLEEPP F LAT +P+++ T+ SRC L P + V+ Sbjct: 126 DEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPAGHIVS 185 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS---VPS 226 L R + AL R + GS AL+L QA+AYS V Sbjct: 186 HLERILGEERIAFEPQALRLLARAAQGSMRDALSLTD-----------QAIAYSANEVTE 234 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRL 286 +L L+ L+DAL G + D L LS S Sbjct: 235 TAVSGMLGTLDQTYMVR--------LLDALAAADGPQILAVADEMAL-----RSLSFSAA 281 Query: 287 QAILGDVCHIREQLMSVTGINRELLITDL-----LLRIEHYLQPGVV 328 L + H R + ++ + L R L P V Sbjct: 282 LQDLASLLH-RIAWAQFAPAS---VLDEWPEAADLRRFAELLSPEQV 324 >UniRef50_B3PHI9 DNA polymerase III, delta prime subunit n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI9_CELJU Length = 337 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 104/308 (33%), Positives = 150/308 (48%), Gaps = 1/308 (0%) Query: 3 WYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHC 62 YPW ++++L A + HAL++ G+G AL++ LLCQ P+ +CG C Sbjct: 8 LYPWQLGEWQQLAQLIAARKLPHALMLAGPRGIGKRHFAEALAQLLLCQAPREGGACGQC 67 Query: 63 RGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD 122 RGC+L +A THPD L PE+ + VD VRE+T+ L + A+L G KVV + A + Sbjct: 68 RGCELNKAATHPDLLWLEPEEAGKAIKVDQVRELTDALGKTAQLSGYKVVVLEPAEAMNT 127 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM 182 AANALLK+LEEP A T L + P +L T+RSRC+L +A P ++ V WLS + Sbjct: 128 NAANALLKSLEEPAANTLLILVSHTPSAVLPTIRSRCQLRAMAMPRQEQVVRWLSPLLVG 187 Query: 183 SQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAY-SVPSGDWYSLLAALNHEQA 241 L + G+P AL+L +GD + RE Q L S+ L A + A Sbjct: 188 RDIPADELLSAARGAPLIALSLLEGDALEQREQQLQQLTRMSLGQLSAIELAANWHTGDA 247 Query: 242 PARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 P + W L + G P + E + S L L V H + L+ Sbjct: 248 PGLMEWFLGFLHTLARWRAGVDDPQAQRWPTELRERLQGVELSLLHRYLEKVLHAKRLLL 307 Query: 302 SVTGINRE 309 S N++ Sbjct: 308 SGANPNKQ 315 >UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina baltica OS145 RepID=A3WNZ0_9GAMM Length = 640 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 78/351 (22%), Positives = 131/351 (37%), Gaps = 38/351 (10%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P E L + + R HHA L G+G + L++ L C++ Sbjct: 9 KWRPMQFDQVVGQQHVLEPLFHALEQQRLHHAYLFTGTRGVGKTTIARILAKALNCERGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ ++ G D + + V+ RE+ + + G KV + Sbjct: 69 SARPCGECPSCEEIEQGRFVDLIEV---DAASRTKVEDTRELLDNVQYRPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L + V Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVVSRCLQFNLRALDREQIVG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 L V AL + + GS AL+L + + Q + + Sbjct: 186 QLEYVLENENVPHDAQALTLLAQSAKGSMRDALSLTDQAIAQGQGKVQVESVQRMLGHLA 245 Query: 226 SGDWYSLLAALNHEQAP---ARLHWLATLLMDALKRHHGAAQVTNV-------------- 268 + LL AL + + L +L+ D L + +V + Sbjct: 246 DAHVHPLLDALASGDSGSVFEKFDELKSLVPDPLMILNELQRVIHRIALIQQIPAMMGAE 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D L L LQ V +++ + ++ + + LLR+ Sbjct: 306 DKTNTTEALLRKLPAEVLQLYYRIVIEGKKE--APYAVDPQSAVEMTLLRL 354 >UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4U2_9GAMM Length = 635 Score = 289 bits (740), Expect = 9e-77, Method: Composition-based stats. Identities = 89/356 (25%), Positives = 136/356 (38%), Gaps = 34/356 (9%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L+ + R HHA L G+G + LSR L C+Q Sbjct: 9 KYRPRTFDELVGQEHVSRALMHALDQDRLHHAYLFTGTRGVGKTTIARILSRCLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C CQ + G D + + V+ RE+ + + G KV + Sbjct: 69 SARPCGVCPTCQEITDGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L P + Sbjct: 126 DEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKALPAEQIAG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + ALL+ + + GS AL+L + Q A+ +V Sbjct: 186 HLKTLLDKEMIRYEEPALLSLGKAAQGSMRDALSLTDQAIAFGSEQLSSEAVNAMLGTVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL---------LMDAL---KRHHGAAQVTNVDVPGL 273 +LL AL ++ L LAT+ L+D L Q Sbjct: 246 RNHVLTLLVALAEQEPGGVLQALATVSEHCPGELALLDELISQLHQLAVCQAVPGSYDET 305 Query: 274 VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVL 329 +LA L+ ++Q R L + + LLLR+ P VL Sbjct: 306 QQQLAAALTAEQIQLYYDVALRGRRDLQDAP--DSRAALEMLLLRM-VLFTPKGVL 358 >UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 Tax=Shewanella RepID=Q12LL5_SHEDO Length = 921 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 78/335 (23%), Positives = 119/335 (35%), Gaps = 42/335 (12%) Query: 2 RWYPWLRPDFEK----------LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ 51 +W P FE+ L + R HHA L G+G +L ++ L C+ Sbjct: 9 KWRP---AKFEQMVGQSHVLLALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCE 65 Query: 52 QPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKV 111 CG C C + G D + + VD RE+ + + G KV Sbjct: 66 TGVTASPCGTCSSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYKPARGRFKV 122 Query: 112 VWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQY 171 + + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L + Sbjct: 123 YLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLSQDE 182 Query: 172 AVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAY 222 L ++ AL + + GS AL+L + Q T Q + Sbjct: 183 ISQQLEFILGQEQLPFESQALTLLAKAANGSMRDALSLTDQAIAFGSGQVMLTQVQTMLG 242 Query: 223 SVPSGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQV 265 S+ LL +L A L L LL A Sbjct: 243 SIDERQVIGLLKSLCDADIAHLMQTTAQVLSFGADADEVLRSLLELLHQITLSQFAPAAA 302 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + + A L P ++Q + R++L Sbjct: 303 QHSLYSEQILAFAKQLKPEQVQLYYQILLTGRKEL 337 >UniRef50_Q0A8H8 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q0A8H8_ALHEH Length = 648 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 83/351 (23%), Positives = 128/351 (36%), Gaps = 39/351 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P LV + + R HHA L G+G + L++ L C+Q Sbjct: 9 KWRPRTFSEMAGQEHVLRALVNALEQQRLHHAYLFTGTRGVGKTTVARILAKCLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + AG D + + V+ RE+ + + G K+ + Sbjct: 69 TAEPCGTCDACRELDAGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTRGRYKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L P Sbjct: 126 DEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKNLPGGLVAD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 +L V AL + + GS AL+L RE A+ ++ Sbjct: 186 YLHTVVEQEGVAAEPQALARLGQAAKGSMRDALSLLDQAIAFGAGAVREDEVCAMLGTID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDALKRHHGAAQVTNVDV----- 270 G L AL A L A + L + L H A + V Sbjct: 246 RGFVLEALEALAAGDGRALLAVTARMSERAPDFSDALDELLHCLHQLALLQVVPEALPAG 305 Query: 271 ---PGLVAELANHLSPSRLQAILGDVCHIREQLMSVT--GINRELLITDLL 316 + +LA L +Q + R L E+++ +L Sbjct: 306 DPDADRLRDLAARLPAEDVQLYYQIALNGRRDLPLAPEGRTGFEMVLLRML 356 >UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 Tax=Pasteurellaceae RepID=A6VMZ2_ACTSZ Length = 699 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 80/347 (23%), Positives = 131/347 (37%), Gaps = 35/347 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G ++ L++ L C Sbjct: 9 KWRPQNFHQVIGQEHILTALANGLKENRLHHAYLFSGTRGVGKTSIARLLAKGLNCIHGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ ++ G D + + V+ RE+ + + G KV + Sbjct: 69 TAEPCGECEHCKAIENGNFIDLIEI---DAASRTKVEDTRELLDNVQYKPVQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L +Q Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALSQQQIAQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ AL + + GS +L+L N R + + + Sbjct: 186 HLANILTQEKIPFEPTALGKIAKAAQGSVRDSLSLTDQAIAMSNADIRVDVVNIMLGLLD 245 Query: 226 SGDWYSLLAALNHEQAPARL-------------HWLATLLMDALKRHHGAAQVTN-VDVP 271 +L AL+ + L + +AL + + N +D Sbjct: 246 DNQPIEILYALHQGNGEKLMQGIQAVADNGADWDELLIEVGEALHQIAMLQLLPNRIDEE 305 Query: 272 GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 + LA H+SP +Q V R++L NR + LLR Sbjct: 306 SQLGFLAKHISPENIQFFYQIVTMGRKEL--AFAPNRRIGAEMTLLR 350 >UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W2_EUBE2 Length = 561 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 124/342 (36%), Gaps = 46/342 (13%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L A R HA L G G ++ ++ + C+ P Sbjct: 25 KWRPDNFNDVKGQDTIVTTLRNQINADRIGHAYLFCGTRGTGKTSVAKIFAKAVNCEHPV 84 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + AGT + + + GVD +R++ E++ G KV + Sbjct: 85 DGNPCGECPTCKAIAAGTSMNVIEI---DAASNNGVDNIRQIREEVQYSPTEGRFKVYII 141 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPPA F LAT E ++ T+ SRC+ + + Sbjct: 142 DEVHMLSIGAFNALLKTLEEPPAYVIFILATTEVAKIPITILSRCQRYDFHRITIETIAG 201 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG------DNWQARETLCQALAYS 223 L + + + A+ + + GS AL+L E + L + Sbjct: 202 RLSELMKAEGLNVEDKAIKYVAKAADGSMRDALSLLDQCLAFYLGKDLKYENVLDVL-GA 260 Query: 224 VPSGDWYSLLAALNHEQAPARLHWLATLLMD-------------------ALKRHHGAAQ 264 V + + +L+ + + + L+M +K A + Sbjct: 261 VDTAVFSKMLSTILSGDVAVCMSLMEDLIMQGRDLSQFVTDFIWYLRNLLLIKTTKDAER 320 Query: 265 V-----TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 + + D + + A ++ L + + + L Sbjct: 321 IEDVIEVSADNLEDLKKDAQNVDIDTLMYYIRVLSELSNDLK 362 >UniRef50_B6EJ42 DNA polymerase III subunit tau n=8 Tax=Vibrionaceae RepID=B6EJ42_ALISL Length = 714 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 76/302 (25%), Positives = 115/302 (38%), Gaps = 25/302 (8%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + R HHA L G+G + ++ L C++ Sbjct: 9 KWRPHHFKDVVGQSHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAKGLNCEEGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ R++ + + G KV + Sbjct: 69 TSTPCGVCSTCKEIDEGRFVDLLEI---DAASRTKVEDTRDLLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLPVTILSRCLQFHLKHISVDQIHA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 L EV+ AL + GS AL+L AL + D Sbjct: 186 QLDLVLDKEEVSKDGRALGLIAHAADGSMRDALSLTDQAI---------ALGNGNVTADI 236 Query: 230 YS-LLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQA 288 S +L L+ +QA L ++T M L V+ GL E+A L + Sbjct: 237 VSMMLGTLDTDQAIRILEAISTKNMQTLMSCINDLADIGVEWDGLAKEIAAQLHKLAMYQ 296 Query: 289 IL 290 L Sbjct: 297 AL 298 >UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZX2_HALOH Length = 588 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 81/358 (22%), Positives = 134/358 (37%), Gaps = 44/358 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + ++GR HA L G G + + L C Sbjct: 9 KYRPQNFNDLVGQHHVVRTLKNALESGRIAHAYLFAGPRGTGKTSTAKVFAMALNCIHGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ +Q G D + + G+D +RE+ EK+ + G KV + Sbjct: 69 TTEPCGQCENCRKIQKGQSIDVIEI---DAASNRGIDEIRELREKVKFYPNEGEYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP + F LAT EP +++ T+ SRC+ + P + Sbjct: 126 DEVHMLTKGAFNALLKTLEEPPEKVVFILATTEPHQVINTILSRCQRFDFSLLPVREIQE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD-----------------NWQA 212 L EV ++AL R + G A++L + Sbjct: 186 RLRYICEKEEVEFEEEALNILARSANGGLRDAISLLDQAISYTGNNLNPIDVQGMLGKVS 245 Query: 213 RETLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTN 267 RE L Q + Y V +G+ L +N + L L Sbjct: 246 REVLSQFIKY-VLNGNSVEALKLVNRIISRGNNVGRLIGDLIEYGRQLLLVKECGPDSRI 304 Query: 268 VDVPGLVAE----LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 ++ P V E A + SRL I+ + + + L++ ++++ + Sbjct: 305 IEYPDEVLEKISGEARAIKTSRLIEIIDQLTVMERDIKYSDE--PRLILEVGIIKMAN 360 >UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLY2_ACIFE Length = 671 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 73/330 (22%), Positives = 119/330 (36%), Gaps = 39/330 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 W P P + L + + GR HA L G G + L++ L C++ Sbjct: 9 TWRPQDFDDLVGQAPIKKALTNALETGRISHAYLFAGPRGTGKTSTARILAKALNCEKGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + GT D + + G+D +R++ E++ KV + Sbjct: 69 TAHPCNQCSNCREITEGTCGDVVEI---DAASNRGIDEIRKLREQVYFAPTSCRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + ++T A NALLKTLEEPP F LAT EP+++L T+ SRC+ Sbjct: 126 DEVHMITTDAFNALLKTLEEPPEHVVFILATTEPQKILNTILSRCQRFDFRRATVDEIAE 185 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQG----------------DNWQAR 213 L + + +AL + G AL+L R Sbjct: 186 HLEKVAKGSHIQAEPEALRLMAIQADGGLRDALSLLDQCSVMASPVTAETVRQVLGLVGR 245 Query: 214 ETLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRH--HGAAQVT 266 E L + L + + L AL ++ L L L ++ Sbjct: 246 EKLRE-LVTRIGQKNLSGALDALGQLLEQGKEMEQILAELLEYFRALLLYQADREYQEIY 304 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHI 296 D +AE A+ + S++ A + + Sbjct: 305 LTDTREALAETASLFTSSQIVASVERIHEA 334 >UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7S3_COPPD Length = 522 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 105/270 (38%), Gaps = 25/270 (9%) Query: 1 MRWYPWLRPD-FEK----------LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLL 49 M Y RP FE+ L + + HA L G G + ++ L Sbjct: 1 MALYRKYRPQTFEEVVGQSHVTEILTKALDNQKISHAYLFAGPKGSGKTSCARIFAKGLN 60 Query: 50 CQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 C+ K C C C+L+ G D + + GVD +RE+ E++ Sbjct: 61 CETGITSKPCNECESCKLINEGHSLDVIEI---DAASNRGVDEIRELRERVKYRPAQSRY 117 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 KV + +A +LT A NALLKTLEEPP F LAT +P+++ T+ SRC+ Sbjct: 118 KVYIIDEAHMLTREAFNALLKTLEEPPEYVVFILATTDPQKIPPTVLSRCQRFRFKKLTS 177 Query: 170 QYAVTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQAL 220 L + ++AL +S G+ AL L + D + + L Sbjct: 178 DEVFQILENVCKSEGFSYQREALELIAEVSDGAVRDALNLLEQISVVDEGKVSIKTARFL 237 Query: 221 AYSVPSGDWYSLLAA--LNHEQAPARLHWL 248 V LL + ++A RL L Sbjct: 238 LNVVEDEVILDLLKTAFADMDEAVERLAEL 267 >UniRef50_A7K5T9 DNA polymerase III delta prime subunit n=12 Tax=Vibrio RepID=A7K5T9_VIBSE Length = 320 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 103/321 (32%), Positives = 161/321 (50%), Gaps = 8/321 (2%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL+P ++ L ++ R ALL+Q+ G+G + LI S+ LLCQ ++CG C Sbjct: 5 YPWLQPVWDNLKVGLESDRIPGALLLQSEQGLGIEKLIEFFSQALLCQN-YASEACGFCH 63 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 CQL Q+ HPD + + PEK + VD VR E ++L G ++ + A + ++ Sbjct: 64 SCQLNQSHNHPDLHWIKPEKEGKAITVDQVRACNRLAQESSQLNGYRLFVIEPADSMNES 123 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 A+NALLKTLEEP A+ F L T ERLL T+RSRC+ +APP + A+ W+ + + Sbjct: 124 ASNALLKTLEEPGAKCLFLLVTHNQERLLPTIRSRCQHWVVAPPSTEQAMQWMREQG--A 181 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPS-GDWYSLLAALNHEQAP 242 Q AL+L+ GSP L + A + ++ S S A+L + + Sbjct: 182 QQVPAYALKLNMGSPIKTLDALNNGDLDAYLAFERTFIKAMSSPASDISECASLMAKHSE 241 Query: 243 ARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMS 302 L W LL DA K G ++ +PG + N + + L + + ++ Q+ + Sbjct: 242 QSLDWAWYLLTDAQKVQFGVSEAQM--LPGAIKFQPN--NYNGLYSSAKALMDLKAQVQA 297 Query: 303 VTGINRELLITDLLLRIEHYL 323 G+N ELL + L+ L Sbjct: 298 FPGLNLELLSMNWLIESREVL 318 >UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 Tax=Proteobacteria RepID=A0KY06_SHESA Length = 1040 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 117/332 (35%), Gaps = 36/332 (10%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C++ Sbjct: 9 KWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEKGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TASPCGVCGSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L +Q T Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPKHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQQEIGT 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +AL + + GS AL+L Q++ S+ Sbjct: 186 QLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSMLGSID 245 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 LL AL A L L LL A Sbjct: 246 EQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPAAAQQS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + A L+P ++Q + R+ L Sbjct: 306 LYSAQIQAFAEQLAPEQVQLYYQILLTGRKDL 337 >UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RMH2_MOOTA Length = 589 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 91/312 (29%), Positives = 125/312 (40%), Gaps = 37/312 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + + GR HA L G G + L+R + C P+ Sbjct: 10 QWRPRTFAEVVGQEHITRTLRNALRTGRLVHAYLFCGPRGTGKTSTAKILARAINCLAPR 69 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ + AG D + + G+D +R + EK+ G KV + Sbjct: 70 EGEPCNECANCRRILAGNSLDVLEM---DAASNRGIDEIRNLIEKIPLGPVEGRYKVYII 126 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPPA F LAT EP ++L T+ SRC+ P Q Sbjct: 127 DEVHMLTQEAFNALLKTLEEPPAHAVFILATTEPRKVLPTILSRCQRFDFHPLTVQAIAG 186 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 L V + AL R +AG AL+L + L V +G Sbjct: 187 RLQEVAAANGVEIEPGALSLLSRKAAGGLRDALSLLD-------QILASGTRGPVTAGQV 239 Query: 230 YSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAI 289 L ARL L L DAL GA + VD LA+ + P RL Sbjct: 240 AVTLGT-------ARLDTLLA-LTDALATGDGAGVLNLVD-----KALASGIEPRRLLED 286 Query: 290 LGDVCHIREQLM 301 L + H R L+ Sbjct: 287 L--LDHTRNLLL 296 >UniRef50_A0KKI0 DNA polymerase III, delta' subunit n=2 Tax=Aeromonas RepID=A0KKI0_AERHH Length = 315 Score = 287 bits (734), Expect = 4e-76, Method: Composition-based stats. Identities = 109/318 (34%), Positives = 154/318 (48%), Gaps = 7/318 (2%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL PD+ L + AGR HA L+ PG+G + L L+R LC +P+ + CG C Sbjct: 2 YPWLIPDWHALSQTAAAGRLGHAWLLLGDPGLGKEQLAEQLARLHLCHRPERGEPCGQCH 61 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 CQL + G HPD TL E T+GV+A+RE+ +L A+LG KVV + DA +T++ Sbjct: 62 SCQLFEKGHHPDLGTLTTE--SKTIGVEAIREICSRLQNSAQLGRGKVVIIPDAERMTES 119 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANALLKTLEEP ++ L + RLL T+ SRC H P E V WL+ + Sbjct: 120 AANALLKTLEEPAGDSLLLLIASQVSRLLPTILSRCHKHVCQLPAEGETVRWLAEQGH-- 177 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPA 243 A LA +R+ G+P L + AR L ++ + + + L Sbjct: 178 -QATLAQVRICQGAPLRVLRYIEEQQDSARRDLLESFLALAQTPTRANHVCGLLASDTQV 236 Query: 244 RLHWLATLLMDALKRHHGAA--QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 RLHWL L DALK G Q+ D+ L +LA S +L + ++ Sbjct: 237 RLHWLQLFLCDALKTQAGCGHHQLAMPDLTALSLQLAELHSSEKLLEAEQQLVELKMACQ 296 Query: 302 SVTGINRELLITDLLLRI 319 N + + + L R Sbjct: 297 PGQLSNPTIHLMNWLTRW 314 >UniRef50_Q13Z80 DNA-directed DNA polymerase n=48 Tax=Burkholderiales RepID=Q13Z80_BURXL Length = 957 Score = 287 bits (734), Expect = 4e-76, Method: Composition-based stats. Identities = 79/314 (25%), Positives = 121/314 (38%), Gaps = 25/314 (7%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L G+G L ++ L C+ Sbjct: 9 KWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAKALNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG CR C+ + G DY + + GVD + + E+ KV + Sbjct: 69 TSTPCGVCRACREIDEGRFVDYVEM---DAASNRGVDEMAALLERAVYAPVDARFKVYMI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NA+LKTLEEPPA F LAT +P+++ T+ SRC L P + V+ Sbjct: 126 DEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPAGHIVS 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNW----QARETLCQALAYSVP 225 L +V AL R + GS AL+L Q E + + ++ Sbjct: 186 HLEHILGEEKVPYDVQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGMLGALD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELA-NHLSPS 284 LL AL A L + D + + D+ L+ +A +PS Sbjct: 246 QSYLIRLLDALADGDGAAVLS-----VADEMALRSLSFSTALQDLASLLHRIAWAQFAPS 300 Query: 285 RLQAILGDVCHIRE 298 + + +R Sbjct: 301 SVLDEWPEAGDLRR 314 >UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Tax=Bacilli RepID=Q4L3D4_STAHJ Length = 571 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 122/341 (35%), Gaps = 39/341 (11%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L + G+ HA + G G ++ ++ + C PQ + C C C+ + G Sbjct: 26 KTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVFAKAINCLNPQDGEPCNECAICKGITQG 85 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 T+ D + + GVD +R + +K+ KV + + +LT A NALLKT Sbjct: 86 TNGDVIEI---DAASNNGVDEIRNIRDKVKYAPSESKYKVYIIDEVHMLTTGAFNALLKT 142 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPPA F LAT EP ++ T+ SR + + L +++ +A Sbjct: 143 LEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGTEQITDRLRFVAEEQQLDYDNEA 202 Query: 187 LLAALRLSAGSPGAALALFQGD----------------NWQARETLCQALAYSVPSGDWY 230 L + S G AL++ E L V G+ Sbjct: 203 LEFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALDVTGSVDEAALNELFKDVIDGNVK 262 Query: 231 SLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 + + ++ ++ + + D + V N + + Sbjct: 263 NAFTRYHQFISEGKEVNRLINDMIYFVRDTIMNK----TVNNHAEFDALM----NFDLDM 314 Query: 286 LQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 L ++ + + +N+ + LL++I ++ Sbjct: 315 LYHMIDIINDTLVSIR--FSVNQNVHFEVLLVKIAEMVKSQ 353 >UniRef50_A9NBZ0 DNA polymerase III, delta' subunit n=6 Tax=Coxiella burnetii RepID=A9NBZ0_COXBR Length = 319 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 153/308 (49%), Gaps = 3/308 (0%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPW + +++++ Y+ GR HALL+ PG+G A++ ++LC+ G CG CR Sbjct: 3 YPWQQTQWQEILTRYRQGRLPHALLLTGSPGLGKFDFAKAVAEFILCEAQDGGV-CGSCR 61 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 GCQL +AG HPD++ L PE+ + + +RE+ LN+ A+ G +V + A + A Sbjct: 62 GCQLFRAGNHPDFFKLIPEEKSKNIKIAQIRELMNALNQTAQHDGYQVAIIYPAEAMNRA 121 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AANA LKTLEEP + + L + +P LL T+ SRC+ + V WL +++ Sbjct: 122 AANAFLKTLEEPCGQIFLILISHQPGALLPTILSRCQRLAFTASANEPTVQWLQKQIEGD 181 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQA-LAYSVPSGDWYSLLAALNHEQAP 242 + + L ++ +P AL L + + R+ L Q + + + S+ L E P Sbjct: 182 RREAIQLLTAASYAPLQALQLKSLNYTEVRDRLLQLIINLTAQRENAVSVAGTLLKEDLP 241 Query: 243 ARLHWLATLLMDALKRHHGAAQ-VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 L L + MD L+ A V N D L+ EL+ L +++ +L ++ Sbjct: 242 FVLQVLILIAMDLLRLQLKATNFVVNSDQLILLQELSTALPQNKIMLLLQELQEAWRLTK 301 Query: 302 SVTGINRE 309 + +N + Sbjct: 302 NSLSVNTQ 309 >UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q1QXJ7_CHRSD Length = 723 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 87/364 (23%), Positives = 137/364 (37%), Gaps = 41/364 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + LV + GR HHA L G+G L L++ L C+Q Sbjct: 9 KWRPRTFHELVGQEHVSRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAKCLNCRQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ RE+ + + G KV + Sbjct: 69 TSVPCGECETCREIDEGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L P + V Sbjct: 126 DEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFTLKNMPPERVVG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + V + AL + + GS A++L + R A+ ++ Sbjct: 186 HLSHILQAESVAYDEQALWLLGKAADGSMRDAMSLTDQAIAFGQGEVRHADVAAMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL---------LMDALK---RHHGAAQVT------- 266 +L AL A L +A+L ++D L AQ+ Sbjct: 246 HRHLLALAEALAEVDAARVLQEVASLAEQGPDFGGILDDLAGIFHRLAIAQMVPDALDNG 305 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 + D + LA + +Q R + S + + LLR+ + G Sbjct: 306 HGD-RDTLLPLAARFTAEDVQLYYQIALQGRGDMESAP--DPRTALEMTLLRMLAFRPQG 362 Query: 327 VVLP 330 V P Sbjct: 363 VPKP 366 >UniRef50_Q47HW9 AAA ATPase, central region n=3 Tax=Betaproteobacteria RepID=Q47HW9_DECAR Length = 537 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 84/337 (24%), Positives = 129/337 (38%), Gaps = 37/337 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G L L++ L C+ Sbjct: 9 KWRPRNFSTLVGQEHVVRALTHALSEQRLHHAYLFTGTRGVGKTTLARILAKSLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C CQ + +G D + VD +R++ E G KV + Sbjct: 69 TATPCGTCSACQEIDSGRFVDLLEV---DAATNTRVDEMRQLLENAVYAPTRGRFKVYVI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+++A NA+LKTLEEPP F LAT +P+++ T+ SRC L P Sbjct: 126 DEVHMLSNSAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPVLAITG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + Q AL R +AGS AL+L + E +++ +V Sbjct: 186 HLGHILQAEGIPFDQPALALVARSAAGSMRDALSLLDQAIAHGAGRVEEAQVRSMLGTVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------------LMDALKRHHGAAQVTNVD 269 +++L AL+ + A L A L L+ L+ + D Sbjct: 246 QDYLFTILEALHGAEPSALLQVAADLGIRSLSFSAALQELGALLTRLQIAQCVPGAIDDD 305 Query: 270 VP--GLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 P + LA LSP +Q V R +L + Sbjct: 306 EPERDRLKGLAAALSPEFVQLAYQIVNAGRNELAAAP 342 >UniRef50_A1SX03 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Psychromonas RepID=A1SX03_PSYIN Length = 774 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 133/350 (38%), Gaps = 38/350 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L S R HHA L G+G + L++ L C++ Sbjct: 9 KWRPGNFQEVVGQQHVLTALSNSLAQNRLHHAYLFSGTRGVGKTTIARILAKSLNCEKGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C CQ + G D + + VD RE+ + + G KV + Sbjct: 69 TATPCGACVHCQAIDQGRFVDLLEI---DAASRTKVDDTREMLDNVQYKPAQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L Q T Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPITVLSRCLQFHLKAILPQEIET 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQALAYSV 224 L+ + T AL + GS AL+L G A +++ + L S+ Sbjct: 186 QLAYILNHEQATFEHAALTVIATAAEGSMRDALSLTDQALAFGSGHIAYQSVLKML-GSI 244 Query: 225 PSGDWYSLL---AALNHEQAPARLHWLATLLMDALKRHHGAAQV------------TNVD 269 + + LL A+ N + ++ L D H A + NV Sbjct: 245 DNNHLHYLLHFIASGNVSKVFLKIDEFVHLGADFAMLHQTLASLCHEIALSQMQPKQNVT 304 Query: 270 VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 V LA L+P +Q ++ N ++ ++R+ Sbjct: 305 QKSAVQLLAERLTPEEVQLYYQ--IAVQGYKDYAFAPNGKIAFEMTVMRL 352 >UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJR0_FERNB Length = 517 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 68/309 (22%), Positives = 120/309 (38%), Gaps = 16/309 (5%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L + + + +HA + G G L++ L C++ Q + C C CQ + G+H Sbjct: 26 LTNALKLQKINHAYIFAGPRGTGKTTTARILAKSLNCEKNQFGEPCNECTSCQAIDNGSH 85 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D L + G+D +R++ E +N +G KV + + +LT A NALLKTLE Sbjct: 86 LDVIEL---DAASNRGIDEIRKIKEGVNFTPVMGKYKVYIIDEVHMLTREAFNALLKTLE 142 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALL 188 EPP F LAT PE++ T+ SRC + E+ ++ L ++ +AL Sbjct: 143 EPPQHIVFILATTNPEKIPPTIMSRCHVLEFRNISEENIISKLKSVCEKEGFDVTYEALK 202 Query: 189 AALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWL 248 + + G AL+ E + + V L ++ E + Sbjct: 203 KIAKRAEGGLRDALSTL--------EQVIRYTGGEVTEKIVDEALGLISEETIEKFIEAT 254 Query: 249 ATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINR 308 + +++ + D + +L + +L L + Sbjct: 255 LNNDRELIEKILNDIYIERGDFDTFINQLIEKTLEKKEDNMLKLASDFYNVLKEIRFAEE 314 Query: 309 ELLITDLLL 317 +LLI L+ Sbjct: 315 KLLIARLMF 323 >UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RU95_9GAMM Length = 591 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 138/350 (39%), Gaps = 35/350 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L+ + R HHA L G+G + L++ L C+Q Sbjct: 9 KWRPKSFGEMVGQEHVLQALINALDHDRLHHAYLFTGTRGVGKTTIARILAKCLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + V+ RE+ E + KV + Sbjct: 69 SSHPCGECGSCLEIAEGRSVDLLEV---DAASRTKVEDTRELLENVQYAPTRSRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L AT+ SRC L P + V Sbjct: 126 DEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPATVLSRCLQFNLKNMPPEQIVG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ V+ + AL R ++GS AL+L + + ET +++ SV Sbjct: 186 HLANVLEHEMVSFEEPALWLLGRAASGSMRDALSLTDQAIAFGSGKLIETDVRSMLGSVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE-----LANH 280 Y LL + L + + A ++ ++ VA+ + N Sbjct: 246 LSFVYQLLEGVAAGDPAELLAIVGRMAEHAPDFEGSTDELISMVHRVAVAQAVPDAIDNS 305 Query: 281 L-SPSRLQAILGDVCHIREQLMSVTGIN--RELLI--------TDLLLRI 319 R+ A+ + QL IN R++ + LLLR+ Sbjct: 306 WGDADRVAALAQSIGAEDAQLFYQIAINGKRDMALAPDPRSGFEMLLLRM 355 >UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2P9_DESAS Length = 527 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 77/334 (23%), Positives = 131/334 (39%), Gaps = 26/334 (7%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 R + L + + R HA L G G + L++ L C Q +G + C C C Sbjct: 21 QRHIVDTLENALKNNRIAHAYLFCGPRGTGKTSTAKILAKALNCHQIKGVEPCNKCSSCV 80 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + G+ D + + G+D +R++ E++ G KV V + +LT A N Sbjct: 81 SVAQGSAIDVIEI---DAASNRGIDEIRDLKERVKFAPTGGKYKVYIVDEVHMLTIEAFN 137 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR-----EVT 181 ALLKTLEEPP F LAT EP +L T+ SRC+ + + L +V Sbjct: 138 ALLKTLEEPPEHVIFVLATTEPHKLPLTILSRCQRFDFKSIGAEPMTSRLKDILQDLQVK 197 Query: 182 MSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQALAYSVPSGDWYSLLAAL 236 +S AL ++ + G AL++ + + E L +V SLL L Sbjct: 198 ISPAALELIVQAAEGGLRDALSILDQIITFNNTAEISEEDIHNLLGTVNERVINSLLEYL 257 Query: 237 NHEQAPARLHWLATLLMD--ALKRHHGA------AQVTNVDVPGLVAELA---NHLSPSR 285 A + L +A + ++ LK + P + + S Sbjct: 258 LRGDAGSSLQVIAEIFLEGKDLKMFVKGFASCVRDLLLQSIEPTAIKNFSRTDQIYSVEY 317 Query: 286 LQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 L A+L + + ++ + +++ L++ Sbjct: 318 LLALLDCLTELEPKMKFSSQ--PRVILELALIKF 349 >UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 Tax=Firmicutes RepID=D1BPK5_VEIPT Length = 895 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 116/320 (36%), Gaps = 25/320 (7%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L+ + + + HA L G G ++ +R + C+ Sbjct: 9 KYRPQTFTDVVGQHQVSDTLMRAIREDKVAHAYLFAGPRGTGKTSMAKIFARAINCEHGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + +G D + + G+D VR + E + G KV + Sbjct: 69 TDHPCNECSACRSILSGQSMDVLEI---DAASNRGIDEVRALRESVKFMPVEGRKKVFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT A NALLKT+EEPPA F AT E E+L T+ SRC+ + Sbjct: 126 DEAHMLTTEAWNALLKTIEEPPAHVMFIFATTEIEKLPVTIVSRCQRYTFRRITSDDIAQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + A + G AL++ + + L V Sbjct: 186 RLSYVAEKEGFDLDSAAAQLIAVHADGGLRDALSILDQCAGMATGSITPQVVEELIGLVS 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 L AL + P L + + DAL A Q+ + + A L ++P Sbjct: 246 KEWIIHFLDALRNGDGPKVLSY----VHDALAEGRDATQIMEALIQHVRALLVGKVAPDA 301 Query: 286 LQAILGDVCHIREQLMSVTG 305 L +++ ++ Sbjct: 302 --DELKVYDAFKDEFLAQAN 319 >UniRef50_A5G697 DNA polymerase III, delta prime subunit n=7 Tax=Geobacter RepID=A5G697_GEOUR Length = 320 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 81/312 (25%), Positives = 130/312 (41%), Gaps = 12/312 (3%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L S GR HA L + G+G A AL + C + +G CG C C+ + A H Sbjct: 16 LQRSLATGRLAHAYLFEGTEGVGKKATALALIEAVFCGKEEG---CGACPSCRKIAALQH 72 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + + P+ + +D +R++ + L K + A AA NALLKTLE Sbjct: 73 PDLHLVEPDGA--FIKIDQIRDLQKDLAYRPFEAPKKACIIDGAERFNQAAGNALLKTLE 130 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRL 193 EPP L T + +L T+ SRC+ + PE+ +L R + +A A L Sbjct: 131 EPPGNALIILVTAQSSGVLPTILSRCQRLHFQTLPEETIAAYLGRNG-IDGEAARIAASL 189 Query: 194 SAGSPGAALALFQGDNWQARETLCQALAYS----VPSGDWYSLLAALNHEQAPARLHWLA 249 + GS AL + + R+ + L + + A + ++ L L Sbjct: 190 AGGSMKKALEISKETTLSDRKQFLERLIGLSLREITPLFSAAEELAADKDKVMELLELLT 249 Query: 250 TLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRE 309 + L D L G + N D+ ++ A LS + + +G V R L+ +N Sbjct: 250 SFLRDILLLKGGGEGIVNADLLPILEREAGRLSQTGIMERIGHVAAARHALLR--NVNAR 307 Query: 310 LLITDLLLRIEH 321 L + L +R+ Sbjct: 308 LTLEVLFMRLAE 319 >UniRef50_Q7MIV2 DNA polymerase III, subunits gamma and tau n=41 Tax=Vibrio RepID=Q7MIV2_VIBVY Length = 730 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 79/352 (22%), Positives = 133/352 (37%), Gaps = 39/352 (11%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + + R HHA L G+G ++ ++ L C++ Sbjct: 9 KWRPRQFKEVVGQGHVLTALENALEHNRLHHAYLFSGTRGVGKTSIGRLFAKALNCEKGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ RE+ + + G KV + Sbjct: 69 TSAPCGQCDTCREIEEGRFVDLLEI---DAASRTKVEDTRELLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L P Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPITVDAIHQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L VT AL + GS AL+L N Q L + ++ Sbjct: 186 QLDFILAKEGVTAQARALGMIAHAADGSMRDALSLTDQAIALGNGQIETDLVSHMLGTID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLM-----DALKRHHGAA---------QVTNVDVP 271 + LL A++ +Q + + L D L + +++D Sbjct: 246 TDQAIHLLEAISSKQPQVAMDKIQQLAQNGAEWDGLLQQLATQLHRIAMYQLLPSSLDKA 305 Query: 272 G----LVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + L+ LSP +Q R+ L N + + ++LR+ Sbjct: 306 QPDAEKIELLSRALSPQDVQLFYQIALKGRDDLSLAP--NGRIGMEMIVLRM 355 >UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcus oceani RepID=Q3J800_NITOC Length = 529 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 85/351 (24%), Positives = 130/351 (37%), Gaps = 38/351 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L GR HHA L G+G L L++ L C++ Sbjct: 9 KWRPRDFTQVVGQEHVVRALTNGLDKGRLHHAFLFTGTRGVGKTTLARILAKSLNCKEGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C+ CQ + G D + + GVD RE+ E ++ G KV + Sbjct: 69 RSTPCGKCQNCQAIDGGNFVDLIEV---DAASRTGVDDTRELLENVHYAPSRGHYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + + + ++ NALLKTLEEPP F LAT EP++L T+ SRC L + Sbjct: 126 DEVHMFSTSSFNALLKTLEEPPPHIKFLLATTEPKKLPVTVLSRCLQFNLRRITPKAIAE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + E+ AL R + GS AL+L Q + + S+ Sbjct: 186 HLNSILEAEEIPSESYALTLIARAAEGSVRDALSLLDQAINYGRGQVMVADVRTMLGSIE 245 Query: 226 SGDWYSLLAALNHEQAPARLHW----------LATLLMD-------ALKRHHGAAQVTNV 268 GD + LL AL + ++++L D V ++ Sbjct: 246 QGDLFILLDALLAGNGQGLIEKVREICAYSVDISSILADLLHLLQRLALYQLAPDTVDDI 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D G+ + LA +P +Q L + +LLR+ Sbjct: 306 DERGIFSSLAARTTPEEVQLFYQIGLIGSRDL--TYAPDHHTAFEMILLRM 354 >UniRef50_Q3A3X2 DNA polymerase III, delta prime subunit n=2 Tax=Desulfuromonadales RepID=Q3A3X2_PELCD Length = 321 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 86/320 (26%), Positives = 139/320 (43%), Gaps = 15/320 (4%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + + L + + R HA L + G+G + AL++ L C SCG C C Sbjct: 8 HQRQKDLLEKAVSSKRLPHAYLFEGPEGIGKRLVALALTKILFCANGN---SCGDCPACH 64 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + HPD + L P+ +++ ++ +R + ++L+ KV + A + AAAN Sbjct: 65 KVDHHNHPDLHQLGPDG--SSIKIEQIRALQKELSYRPLEAPYKVSIIDGAEKMNPAAAN 122 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDA 186 ALLKTLEEP ++T L T P+ +L T+RSRC+ + P + L ++ + Sbjct: 123 ALLKTLEEPRSQTLLILLTPAPDAVLPTIRSRCQRLPFSRIPRERLQEVLVEQLNIEDAQ 182 Query: 187 LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLA-----ALNHEQA 241 LS GS AL + Q R+ L + L ++ SG LL A + Sbjct: 183 AHILATLSEGSFKKALGKDRELYLQRRKELLKNLT-ALSSGSIIPLLNLAQKFAEEKDLL 241 Query: 242 PARLHWLATLLMDALKRHHG--AAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 L + D L HG + NVD+ + ++ + S L L + R Sbjct: 242 FDILEIIQAFYRDLLLLQHGRPMDDLVNVDMLETLQSVSRRENVSSLLGKLDALMTSRRH 301 Query: 300 LMSVTGINRELLITDLLLRI 319 L +NR+L + LLLR+ Sbjct: 302 LER--NVNRQLAMEVLLLRL 319 >UniRef50_A9D7T4 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=A9D7T4_9GAMM Length = 882 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 79/335 (23%), Positives = 120/335 (35%), Gaps = 42/335 (12%) Query: 2 RWYPWLRPDFEK----------LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ 51 +W P FE+ L + R HHA L G+G +L ++ L C+ Sbjct: 9 KWRP---ATFEQMVGQSHVLLALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAKGLNCE 65 Query: 52 QPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKV 111 Q CG C C + G D + + VD RE+ + + G KV Sbjct: 66 QGITASPCGQCSSCVEIAEGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPSRGRFKV 122 Query: 112 VWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQY 171 + + +L+ ++ NALLKTLEEPP F LAT +P+RL T+ SRC L + Sbjct: 123 YLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQDE 182 Query: 172 AVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAY 222 L ++T AL + + GS AL+L + T Q + Sbjct: 183 ISAQLSYVLTQEQLTFDHAALTLLAKAANGSMRDALSLTDQAIAFGAGTVQLTQVQTMLG 242 Query: 223 SVPSGDWYSLLAALNHEQAPARLHWL----------ATLLMDALKRHHGAAQVTNVDVP- 271 S+ SL AL + + +L L+ H Sbjct: 243 SIDEKHVLSLFNALVQGDIENLMRMIGQILSFGADPEEVLRSLLELLHQITLSQFAPAAA 302 Query: 272 ------GLVAELANHLSPSRLQAILGDVCHIREQL 300 + A LSP ++Q + R+ L Sbjct: 303 QLSIYSEQIKAFAEQLSPEQVQLYYQLLLTGRKDL 337 >UniRef50_C6APV7 DNA polymerase III subunit delta' n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6APV7_AGGAN Length = 356 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 113/349 (32%), Positives = 170/349 (48%), Gaps = 31/349 (8%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 + YPWL P + K+ ++ GHHALL++A G+G L AL++ L+C P G ++CG Sbjct: 2 ISLYPWLAPTYHKITGAFDEALGHHALLLRADVGLGVAQLCEALAQRLMCLTPNGDEACG 61 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C LMQA +HPD+ +AP + K+ +G+D +R + E+ +HA+ G KV+++ A L Sbjct: 62 QCHSCHLMQANSHPDFQHIAPIENKD-IGIDQIRAMNEQATQHAQQNGNKVIYIEQAHRL 120 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T+AAANA+LKTLEEP T+F L LL T+ SRC++ L PP + A+ WL +V Sbjct: 121 TEAAANAILKTLEEPRPNTYFILHCDIQTALLPTIYSRCQVWNLLPPETEVALQWLQSQV 180 Query: 181 TMSQDALL---------------------------AALRLSAGSPGAALALFQGDNWQAR 213 + +L ALR++ G P ALA+ Q + + R Sbjct: 181 SAETLEMLFASSPTRLLTPDGAIGDANVQNPLDFVTALRVNYGRPLLALAMLQQNQLEQR 240 Query: 214 ETLCQALAYSVPSGDWYSLLA--ALNHEQAPARLHWLATLLMDALKRHHGAAQ-VTNVDV 270 + L A + A +L WL L DALK D+ Sbjct: 241 REFLRQFWVFYRRRSPLELFPFFAKEKDMALQQLDWLLAFLSDALKAKLQVKNGWICQDI 300 Query: 271 PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 V + A LS L V +R L ++ +N+EL++ D L R+ Sbjct: 301 ERGVIQFAQGLSAPALLQAGNIVQKVRSDLQTINAVNQELILLDGLTRL 349 >UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 Tax=Clostridia RepID=C7HNJ4_9THEO Length = 394 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 135/362 (37%), Gaps = 45/362 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + + HA L G G ++ ++ + C Sbjct: 8 KYRPKSFKEVVGQEHIVKTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFAKAVNCLNNT 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C CQ + T D + + V+ VRE+ E + KV + Sbjct: 68 DGEPCNSCEICQAINNNTTMDVLEI---DAASNNSVNDVRELRESVIYAPSQAKYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F LAT EP++L T+ SRC+ P + Sbjct: 125 DEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPDKLPDTILSRCQRFDFKRIPTRLIAQ 184 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQALAYSV 224 L R + + + L GS A++L + + E +C+ L + Sbjct: 185 NLDRICNDSGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEGLITYEDVCEMLGVA- 243 Query: 225 PSGDWYSLLAALNHEQAPARLHWLA-----------------TLLMDALKRHHGAAQVTN 267 +SLL +N + A L L +L D + G ++ Sbjct: 244 NDEVLFSLLDYMNAKDVAASLKQLDKILSYGIDVGNFLKSLTYILRDMVLYKTGGEELKE 303 Query: 268 VDVPGL--VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + + + E + + L L ++++++ I+ L+ +LR+ ++P Sbjct: 304 ILYSDVETIKERVQNFGTAFLTNALEKFTNLQKEVR--YAISPLTLLEVTILRL---IKP 358 Query: 326 GV 327 + Sbjct: 359 EI 360 >UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ4_9FIRM Length = 593 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 119/298 (39%), Gaps = 31/298 (10%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + + L + + + HA L G G ++ ++ + C+ + HK C C C Sbjct: 27 QKHIVKTLQNAVEQNKIAHAYLFCGPRGTGKTSIAKIFAKVINCESKE-HKPCLQCDNCL 85 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 +Q G+HPD + + GV+ VR + EK+ G KV + + +++ A N Sbjct: 86 AVQNGSHPDIIEI---DAASNNGVEEVRNLIEKVKYAPLKGKYKVYIIDEVHMMSAGAFN 142 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVT 181 ALLKT+EEPP F LAT EP ++L T+ SRC+ P+ V+ + + Sbjct: 143 ALLKTIEEPPEHVIFILATTEPHKVLPTIISRCQRFDFTKVPKNEIVSRIHTILEKEHIE 202 Query: 182 MSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQA 241 D + +L+ G AL++ L Q +AY+ + + Sbjct: 203 CDDDVIELIAQLADGGLRDALSI-----------LDQCIAYATNHIELQHINEIYGITTV 251 Query: 242 PARLHWLATL-------LMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGD 292 ++ + LMD L +D+P L +L L S + D Sbjct: 252 QEKMKLFHHIFNNEPVDLMDML----DGMLEKGLDIPRLTVDLIELLKESIIFEYTKD 305 >UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 Tax=Synechococcus RepID=Q2JLX3_SYNJB Length = 779 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 86/364 (23%), Positives = 136/364 (37%), Gaps = 41/364 (11%) Query: 1 MRWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P D + L + + GR A L G G + L++ L C+Q Sbjct: 12 LKYRPQRFADVVGQGAVVQTLANAIRLGRVAPAYLFCGPRGTGKTSSARILAKSLNCEQG 71 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 C C C+ + AG D + + GVD +RE+ E+ KV Sbjct: 72 PTPDPCQACSQCRAITAGASLDVLEI---DAASNTGVDNIRELIERAQFAPVNSRYKVYV 128 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L++AA NALLKTLEEPP F LAT +P+R+L T+ SRC+ P V Sbjct: 129 IDECHMLSNAAFNALLKTLEEPPPRVVFVLATTDPQRVLPTIVSRCQRFDFRRIPLDDMV 188 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQA---LAYSVP 225 L + ++ +AL +LS G A L + +A L +P Sbjct: 189 AHLGKIAAQEGIPITPEALQLVAQLSQGGLRDAERLLDQLSLLEGSITPEAVWDLVGGIP 248 Query: 226 S------------GDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 D ++L+ ++ A L L L D L Q V Sbjct: 249 EQQLLALMDALLAQDVQAVLSQTRQLLERGKEPLALLQNLVALYRDLLLVKTAPQQRELV 308 Query: 269 DVPG----LVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 V + + A S L A + Q+ +L + L+ + L+ Sbjct: 309 AVTDSTWAALQQRAPRYSVEILLAAQSHLRQCEPQIRQSGQ--PQLWLEIALVDLLGQLR 366 Query: 325 PGVV 328 P +V Sbjct: 367 PSMV 370 >UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE33_ACHLI Length = 564 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 74/327 (22%), Positives = 124/327 (37%), Gaps = 33/327 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 + P D + L + + HA + G G ++ +++ L C + Sbjct: 9 TYRPKFFKDVFGQKVIVQTLQNALLNEKIGHAYIFSGPRGTGKTSVAKIVAKALNCLEAP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C + G PD + + GVD +R++ +K+ +G KV + Sbjct: 69 AKEPCGKCDVCLGVDRGDVPDIIEI---DAASNNGVDEIRDLRDKVKYAPSIGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT AA NALLKTLEEPP F LAT EP ++ AT+ SRC+ Sbjct: 126 DEVHMLTTAAFNALLKTLEEPPKYVVFILATTEPHKVPATILSRCQRFDFKNIEMDQIEE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSG-- 227 L + ++ +AL A R + G AL+L + + + Y+V G Sbjct: 186 NLKQIINKENLKITPEALTAIARTAEGGMRDALSLLDQVVSFTNDEITEEDIYTVSGGLS 245 Query: 228 --DWYSLLAALNHEQAPARLHWLATLLMD-----------ALKRHHGAAQVTNVDVPGLV 274 LL + +Q L L ++ D L D Sbjct: 246 RRYINELLKVIYLKQPQKALDLLNQIIKDGKDIARMVSDIILALRDVLLDKIRPDKKYPD 305 Query: 275 AELANHLSPSRLQAILGDVCHIREQLM 301 + P+ + A L + ++++L Sbjct: 306 ---LKDIKPNLIYAYLDILNDLQQELK 329 >UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 Tax=Thermoanaerobacter RepID=B0K0Z9_THEPX Length = 518 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 135/362 (37%), Gaps = 45/362 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + + HA L G G ++ ++ + C Sbjct: 8 KYRPKSFKEVVGQEHIVKTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFAKAVNCLNNT 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C CQ + T D + + V+ VRE+ E + KV + Sbjct: 68 DGEPCNSCEICQAINNNTTMDVLEI---DAASNNSVNDVRELRESVIYAPSQAKYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F LAT EP++L T+ SRC+ P + Sbjct: 125 DEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPDKLPDTILSRCQRFDFKRIPTRLIAQ 184 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQALAYSV 224 L R + + + L GS A++L + + E +C+ L + Sbjct: 185 NLDRICNDSGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEGLITYEDVCEMLGVA- 243 Query: 225 PSGDWYSLLAALNHEQAPARLHWLA-----------------TLLMDALKRHHGAAQVTN 267 +SLL +N + A L L +L D + G ++ Sbjct: 244 NDEVLFSLLDYMNAKDVAASLKQLDKILSYGIDVGNFLKSLTYILRDMVLYKTGGEELKE 303 Query: 268 VDVPGL--VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + + + E + + L L ++++++ I+ L+ +LR+ ++P Sbjct: 304 ILYSDVETIKERVQNFGTAFLTNALEKFTNLQKEVR--YAISPLTLLEVTILRL---IKP 358 Query: 326 GV 327 + Sbjct: 359 EI 360 >UniRef50_A4C5P9 Putative DnaX, DNA polymerase III, gamma/tau subunits n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5P9_9GAMM Length = 820 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 78/356 (21%), Positives = 138/356 (38%), Gaps = 47/356 (13%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + LV + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPQNFHQLVGQEHVKQALVNALTQQRLHHAYLFTGTRGVGKTTIARIFAKSLNCELGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C ++AG + D + + V+ RE+ + + G KV + Sbjct: 69 TATPCGQCSACLDIEAGRYIDLLEI---DAASRTKVEDTREILDNVQYAPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L+ Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLSALSRPQIEQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L ++ +L + + GS AL+L N Q E+ +++ + Sbjct: 186 QLSFVLTEEQIHFEVASLALLAKAADGSMRDALSLTDQAIAQTNGQVNESQVKSMLGLMD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQV-------------------- 265 + LL ++ + L +L+ D +K++ A V Sbjct: 246 ASWAKRLLVSIVDKDGAELL----SLVADLVKQNANAKSVLDDLLSLTHLLLLTQLVPSA 301 Query: 266 --TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 N D + ++ LSP ++Q + ++ L + +L + +LLR+ Sbjct: 302 AAFNEDEADFIDAMSKSLSPEQVQVYYQLLLGGKKDLQWAP--DEKLGLEMVLLRL 355 >UniRef50_B1ZQU6 DNA polymerase III, subunits gamma and tau n=3 Tax=Verrucomicrobia RepID=B1ZQU6_OPITP Length = 395 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 75/339 (22%), Positives = 127/339 (37%), Gaps = 31/339 (9%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + R HA L G G + ++ L C Sbjct: 12 KWRPQTFDDVVGQDHVVRTLKNAIARNRIAHAYLFVGPRGTGKTSTARIFAKALNCTDGP 71 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C+ + G+H D + G + GVD VR++ + + G KV + Sbjct: 72 KADFDPNDPACKAIAEGSHLDVIEI---DGASNNGVDQVRDLRDTVQYAPAQGRYKVYII 128 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPP F AT +P+++L T+ SRC+ L P P + Sbjct: 129 DEVHMLSAAAFNALLKTLEEPPGHVKFVFATTDPQKVLPTIISRCQRFDLKPIPPDLIIA 188 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG-------DNWQARETLCQALAY 222 L ++T+S AL R++ G A ++ D +A L Sbjct: 189 RLKQIAASEKITISAAALECIARMADGGMRDAQSILDQMISFCGTDISEADVLDVYGLVS 248 Query: 223 SVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANH-- 280 + + LAA +H + A + T D ++ + +A+ Sbjct: 249 AEKIAELAGALAAGDHRKIVAIVDDCDTNGRDLVRLLSDLQAFVRAALLDAIAQGGRSAK 308 Query: 281 -----LSPSRLQAILGDVCHIREQLMSVTG--INRELLI 312 ++ +L +L + + IN E+ + Sbjct: 309 LGGEPMTTEQLTRMLDALREGEGAVKLGLAEKINFEVTL 347 >UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 Tax=Shewanella oneidensis RepID=Q8EFG0_SHEON Length = 1002 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 116/332 (34%), Gaps = 36/332 (10%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+ Sbjct: 9 KWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TASPCGVCGSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L +Q T Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQQEIGT 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +AL + + GS AL+L Q++ S+ Sbjct: 186 QLQHILTQEQLPFEHEALGLLAKSANGSMRDALSLTDQAIAFGGGTVMLNQVQSMLGSID 245 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 LL AL A L L LL A Sbjct: 246 EQHVLGLLKALTDADIGALMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPAAAQQS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + A L+P ++Q + R+ L Sbjct: 306 LYSAQIQAFAEQLAPEQVQLYYQILLTGRKDL 337 >UniRef50_Q1ATA7 DNA polymerase III, subunits gamma and tau n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATA7_RUBXD Length = 567 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 81/356 (22%), Positives = 131/356 (36%), Gaps = 41/356 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 RW P P L + + GR HA L G G + L+ L C Q Sbjct: 9 RWRPRTFGEIAGQEPVVRTLRRAIETGRVAHAYLFSGPRGTGKTSTAKVLAMGLNCAQGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + AG+ D + + G+D +RE+ +++N G AKV + Sbjct: 69 TPEPCGRCESCRSIVAGSSMDVIEM---DAASNRGIDEIRELRDRVNLAPAAGRAKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLK LEEPP F LAT E ++L T+ SRC+ P V Sbjct: 126 DEVHMLTTEAFNALLKMLEEPPEHVVFVLATTEKHKVLPTIISRCQSFDFRRPGVGTLVE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + ++AL A R S GS A + + L + L S Sbjct: 186 KLSEIARAEGIEAEREALTAIARASGGSFRDAEGMLDQISSFSEGRVTVALVRELLGSAG 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTN------------------ 267 AL+ +A L + L + AA++ + Sbjct: 246 PEMLAETADALHERRAADALRVVDRLSSEGRDLGQFAAELISHLRVLMLLPHAPEAALAE 305 Query: 268 --VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 + + E A + ++ + ++ G + +L + L++ Sbjct: 306 AGPEERPALEEQARRIPTGETVRMIEALGETSGRIRR--GGDPKLELELCFLKLAR 359 >UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTB0_9GAMM Length = 647 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 108/299 (36%), Gaps = 23/299 (7%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + L+ + R HHA L G+G + LS+ L C+ Sbjct: 9 KWRPRIFAEMAGQQHVLQALINALDHDRLHHAYLFTGTRGVGKTTIARILSKCLNCEVGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + GVD +RE+ + + G K+ + Sbjct: 69 SSVPCGECSSCTEIGEGRFIDLIEV---DAASRTGVDDMRELLDNVQYAPSRGRYKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ ALLKTLEEPP F AT +P++L T+ SRC L + Sbjct: 126 DEVHMLSKSSFAALLKTLEEPPPHVKFLFATTDPQKLPITVLSRCLQFNLKNLSAERITE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 L +V + AL + R + GS AL+L V G+ Sbjct: 186 HLQFVLGEEQVPFEEAALWSLARAADGSMRDALSLTDQAIGHG--------GGQVNEGEV 237 Query: 230 YSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQA 288 ++L + L + L G D + ++ + + Sbjct: 238 SAMLGTIERSYVVDICQALISGSGTELLAAIGRMAEQAPDYDAALTDILSVWHQVAIVQ 296 >UniRef50_UPI0001BC30A0 DNA polymerase III, delta prime subunit n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC30A0 Length = 329 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 140/323 (43%), Gaps = 12/323 (3%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 +L+++ + +HA + G G + L A ++ LLC++ QG + CG C C+ Sbjct: 10 HENIISQLISAVSMSKINHAYIFNGPDGSGKNMLAKAFAQALLCEK-QGPEGCGECHFCK 68 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAA 125 ++G++PD + K +N + VD +RE + + + G KV + +A LT A Sbjct: 69 QTESGSNPDLIYIRHSK-ENIISVDDIRESLVQDIQIKPYNGLYKVYIIDEAEKLTVQAQ 127 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQD 185 NALLKT+EEPP + T + L T+ SRC + L P + +L + ++ Sbjct: 128 NALLKTIEEPPEYSVIIFLTNNADIFLQTILSRCIVFNLKPLRDDVITDYLIKTYKIADY 187 Query: 186 ALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAAL-----NHEQ 240 + G G A+ LF+ +++ + L ++ S + Y L+ + N Sbjct: 188 EAKVCSSFAQGILGKAIRLFESEDFNGVKEAAVRLVKNIYSYEIYDLIEEVKMISQNKVN 247 Query: 241 APARLHWLATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 + L D + K + D + + A+ S L+ I+ + Sbjct: 248 INDFIDILEMWYRDVILFKVTKDPNNLIFKDEINYIRKSASKSSYEGLENIINGCEIAKS 307 Query: 299 QLMSVTGINRELLITDLLLRIEH 321 ++ + +N +L I +LL I+ Sbjct: 308 RIKA--NVNFDLAIELMLLNIKE 328 >UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DT09_EIKCO Length = 754 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 83/333 (24%), Positives = 131/333 (39%), Gaps = 37/333 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + GR HHA L+ G+G + L++ L C+ P Sbjct: 9 KWRPKTFADLVGQEHVVKALQNALGKGRLHHAYLLTGTRGVGKTTIARILAKSLNCETPH 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C+ + AG D + + G+D +REV E G KV + Sbjct: 69 EGEPCGQCQSCRDIDAGRFVDLLEI---DAASNTGIDNIREVLENAQYAPTAGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPP F LAT +P ++ T+ SRC L Q Sbjct: 126 DEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTAQQVSQ 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ ++ AL R +AGS AL+L + E + + +V Sbjct: 186 HLAHVLTSEQIPYEAPALALLGRAAAGSMRDALSLLDQAIAMGSGSVTEADVRQMIGAVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDAL------------------KRHHGAAQVTN 267 YSLL A ++ L + A+ + AA + Sbjct: 246 QHYLYSLLQAAANQDGAVLLATAQEMAGRAIGFDSALSELALLLQKLALIKTIPAAVPAD 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + +LA L ++Q V H ++ L Sbjct: 306 DPERDTLQQLAGQLGDEQIQLYYQCVIHGKQDL 338 >UniRef50_C9PPQ1 DNA polymerase III subunit gamma/tau n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PPQ1_9PAST Length = 741 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 126/359 (35%), Gaps = 37/359 (10%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + R HHA L G+G ++ ++ L C Sbjct: 9 KWRPKTFADVVGQSHILIALSNGLKENRLHHAYLFSGTRGVGKTSIARLFAKGLNCVNGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ ++ G D + + V+ RE+ + + G KV + Sbjct: 69 TAEPCGECEHCKAIEEGRFIDLIEI---DAASRTKVEDTRELLDNVQYKPVQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALEQTQIAQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + AL + + GS +L+L N + + + Sbjct: 186 HLEFILKQESIPFDFLALEKLAKAAQGSIRDSLSLADQAIAMSNGNITLNVVNEMLGLLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLAT----------LLMDALKRHHGAAQVT-----NVDV 270 +L L + + L D ++ H A +D Sbjct: 246 DNQAIDILYTLQQGNGENMMKIIQAIAEKGSDWDLFLRDIAEKLHQIAVKQLLPKDRLDE 305 Query: 271 PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVL 329 + LA ++P LQ + R++L + + LLR P ++ Sbjct: 306 SNQLDFLATLITPDDLQFFYQVIVAGRKEL--AFSPTPRIGVEMTLLR-ALAFHPKLIN 361 >UniRef50_P43746 DNA polymerase III subunit gamma/tau n=23 Tax=Pasteurellaceae RepID=DPO3X_HAEIN Length = 688 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 82/362 (22%), Positives = 135/362 (37%), Gaps = 37/362 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + R HHA L G+G ++ ++ L C Sbjct: 9 KWRPKTFADVVGQEHIITALANGLKDNRLHHAYLFSGTRGVGKTSIARLFAKGLNCVHGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ RE+ + + +G KV + Sbjct: 69 TATPCGECENCKAIEQGNFIDLIEI---DAASRTKVEDTRELLDNVQYKPVVGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L E Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKALDETQISQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + AL+ + + GS +L+L + Q + + + Sbjct: 186 HLAHILTQENIPFEDPALVKLAKAAQGSIRDSLSLTDQAIAMGDRQVTNNVVSNMLGLLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLAT----------LLMDALKRHHGAAQVT-----NVDV 270 +L AL+ + L LL + ++ H A + + D Sbjct: 246 DNYSVDILYALHQGNGELLMRTLQRVADAAGDWDKLLGECAEKLHQIALMQLLPQKSSDN 305 Query: 271 PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLP 330 + LA H+SP +Q + R+ L + NR + LLR P + Sbjct: 306 NEHFSFLAKHISPENVQFFYQVIVSGRKDLSNAP--NRRIGAEMTLLR-ALAFHPKFLTA 362 Query: 331 VP 332 VP Sbjct: 363 VP 364 >UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus RepID=A8W2Q1_9BACI Length = 600 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 126/335 (37%), Gaps = 39/335 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P + D L + + HA L G G + +++ + C+Q Sbjct: 10 WRPQVLKDVVGQEHITRTLRNALLQQKLSHAYLFSGPRGTGKTSAAKIIAKAVNCEQAPV 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C +Q G+ D + + GVD +R++ +K+ KV + Sbjct: 70 EEPCNTCSTCTGIQDGSIVDVIEI---DAASNNGVDEIRDIRDKVKFAPSGASYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP F LAT EP ++ T+ SRC+ + Sbjct: 127 EVHMLTTGAFNALLKTLEEPPRHVIFILATTEPHKIPLTIISRCQRFDFKRITAHTMIKR 186 Query: 176 LSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVPS 226 + ++ + DAL R S G AL+L A ++ ++ + Sbjct: 187 MEEIIEDGDLAVDPDALSMIARASEGGMRDALSLLDQAISYADTSVTLDDVLSIIGAASQ 246 Query: 227 GDWYSLLAALNHEQAPARLHWLATLL-----------------MDALKRHHGAAQVTNVD 269 Y ++ AL +Q L + L+ D L A + D Sbjct: 247 DLMYDVMEALLDQQVADGLTAIDRLMSDGKDPGRFMEDFIFLTRDLLMVQAAPALDESGD 306 Query: 270 VP---GLVAELANHLSPSRLQAILGDVCHIREQLM 301 LA+ S S L A++ + H ++Q+ Sbjct: 307 RKLGDQRFEILASKASQSWLFALMEKLNHFQQQMK 341 >UniRef50_A0L8F3 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8F3_MAGSM Length = 605 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 91/368 (24%), Positives = 138/368 (37%), Gaps = 46/368 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + + GR HA L + G+G L L+ L C Sbjct: 13 KWRPRRFEDLIGQEHTVQALRHALEQGRIPHAFLFTGIRGIGKTTLSRLLAMCLNCGTGV 72 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G HPD + + + V+ +RE+ + + L K+ + Sbjct: 73 TANPCGACDSCRAIVRGEHPDVFEV---DAASRTKVEQMRELLDGVAYTPSLSRYKIYIL 129 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F AT E ++L T+ SRC+ + L Sbjct: 130 DEVHMLSASSFNALLKTLEEPPTHVKFIFATTEVRKILPTILSRCQRYDLRRLDRDGLAR 189 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 +L+ ++ Q+ L A + GS AL+L + T L Sbjct: 190 YLAHVLDVEQIAYDQEGLAAISHAADGSVRDALSLLDQAIAHGGGRVDYTHVSGLLGLTD 249 Query: 226 SGDWYSLLAALNHEQAPARLHWLAT----------LLMDALKRHHGAAQVTNVDVPGLVA 275 +L A L + L A LL D L H + V V Sbjct: 250 RQAVVALFADLCRGRLLEMLERAAYFHRDGVEPVVLLNDLLDITHQVTRELAVGVGDAAQ 309 Query: 276 ELANH---------LSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 L+ H L LQ + + RE L + + R+ + LLLR H Sbjct: 310 ALSEHEGLKEVWPKLGLEHLQMLYQVLLRGREDLQ-MARLPRQ-ALEMLLLRAAHL---- 363 Query: 327 VVLPVPHL 334 PVP L Sbjct: 364 --RPVPPL 369 >UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteria RepID=B8FG14_DESAA Length = 706 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 84/359 (23%), Positives = 137/359 (38%), Gaps = 42/359 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + E L + R HAL + G G + L++ + C Sbjct: 9 KYRPQTFDEVVAQPHITETLKNAINQERVAHALCLSGPRGTGKTTVARILAKAMNCVNGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + A D + + G + V+ VRE+ E + LG KV + Sbjct: 69 TPEPCGVCASCKEIAASNAVDVFEI---DGASNNSVEQVRELRENVQYAPALGNYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPP F LAT E ++ T+ SRC+ + V Sbjct: 126 DEVHMLSQAAFNALLKTLEEPPPHVMFILATTESHKIPVTILSRCQRYDFKRISLDDIVG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQ------ 218 L+ T+ + +L A R S G AL+L + E + Sbjct: 186 HLAKLAGLENFTIEEQSLWAVARRSGGCMRDALSLLDQVMAYSTGEASFEKVLDILGVAG 245 Query: 219 -----ALAYSVPSGDWYSLLAALNHEQAPAR-LHWLATLLMDALKRHHGAAQVTNV---- 268 ALA ++ D + L A++ A L + L+D L+ V + Sbjct: 246 RKSLFALAQALLDRDVPACLTAVDQLYARGYDLKQVMADLLDHLRDLTVVKTVRDPGPLL 305 Query: 269 DVP----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 D+P + E + SP+ + +L + + L + L+RI Sbjct: 306 DIPPGEIQAMQEQVANASPAFVNQVLSLLFKEEAAVRLSPQ--PRLALEVALIRICEIT 362 >UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=cellular organisms RepID=Q7NXL6_CHRVO Length = 639 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 85/348 (24%), Positives = 136/348 (39%), Gaps = 41/348 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + + R HHA L+ G+G + L++ L C+ Sbjct: 9 KWRPKRFADLVGQEHVVRALSNALKEQRLHHAYLLTGTRGVGKTTIARILAKSLNCETGT 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C+ + +G D + + G+D +REV E +G KV + Sbjct: 69 TAEPCGECQACRQIDSGRFVDLLEI---DAASNTGIDNIREVLENAQYAPTMGRFKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPP F LAT +P+++ T+ SRC L Q + Sbjct: 126 DEVHMLSKSAFNAMLKTLEEPPGHVKFILATTDPQKVPVTVLSRCLQFSLRNMTPQQVSS 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ + AL R ++GS A +L + +E +A+ +V Sbjct: 186 HLAHMLDIEGIHYEAPALALLGRAASGSMRDAQSLLDQAIAYGLGEVKEDGVRAMLGAVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL------LMDALKRHHG------------AAQVTN 267 ++LL AL PA + L AL AA + Sbjct: 246 RRYLFTLLQALAASDGPALMAEADRLAERGVSFDSALSELAVLLQQLALAQTVPAALAAD 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLM----SVTGINRELL 311 + LA+ ++P +Q H R+ L G N LL Sbjct: 306 EPERDTLFALADAIAPQDVQLYYQIAIHGRKDLALAPDEHAGFNMTLL 353 >UniRef50_A9A090 DNA polymerase III, delta prime subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A090_DESOH Length = 332 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 93/334 (27%), Positives = 135/334 (40%), Gaps = 21/334 (6%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKS-------- 58 L G HA L + G+G + + C K Sbjct: 3 QEKPLRTLAGILARGDIPHAFLFTGIDGIGKRSAAMGFAMACNCLAAVQEKPLPVPVPGD 62 Query: 59 -----CGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 CG CR C+ + AGTHPD T+APE + + +RE+ EK+ + V Sbjct: 63 SGLPFCGTCRICRAIAAGTHPDVITIAPEGNA--IKIGRIRELIEKVAFRPHEAKMRAVI 120 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 ++DA + AANALLK+LEEPP +T FFL LL T+ SRCR AP Sbjct: 121 ISDAWAMNPEAANALLKSLEEPPPQTLFFLTAEHASDLLPTVVSRCRHIRFAPVSADRIA 180 Query: 174 TWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLL 233 +L + + + A +A +S GS ALAL R+ L LA L Sbjct: 181 AFLQQHHGVDEKAARSAALMSGGSVARALALTDVPLGAWRQWLAAELAALPSRPVPLVLA 240 Query: 234 AA----LNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAI 289 A N +Q L + T L DA+ + ++ N+D+ VA L+ S + L Sbjct: 241 FAEKLQKNKDQIGQWLGMIQTCLYDAVVWKYQPGRIMNIDMTDAVAALSEQESIASLGRK 300 Query: 290 LGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 + V + + L +N L L L + + L Sbjct: 301 IDAVVAMEKAL--NRNLNPRLATEKLALELANRL 332 >UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=root RepID=Q2LYB8_SYNAS Length = 588 Score = 284 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 124/355 (34%), Gaps = 42/355 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + L + + R HA L G+G ++ L++ + C+Q Sbjct: 9 KWRPQVFEDVVGQQHVVQTLKNAIRQERIAHAFLFSGPRGVGKTSIARILAKAINCEQGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + G D + G + G+D +RE+ E++ KV + Sbjct: 69 AGTPCNVCTNCREITEGISMDVREI---DGASNRGIDEIRELRERIRFLPVSCRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F AT E ++ AT+ SRC+ + Sbjct: 126 DEVHMLTREAFNALLKTLEEPPPHVVFIFATTETHKVPATILSRCQCFEFRRLSLRQIAE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +S L GS + ++F + + L Sbjct: 186 QLRKIAETEKIRISDAGLAWIAEAGDGSMRDSESIFDQVISYAGTAIEDEAVEELLGRTD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTN-----------------V 268 + L A+ A L + L + + + + Sbjct: 246 RRFLFQLSEAVLRRDAGQCLRIVEEGYYAGLDMTYFYTLLLHHFRNLLLVKIVGPQQELL 305 Query: 269 DVPG----LVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D+PG + +S LQ +L + E N L + ++ R+ Sbjct: 306 DLPGNDLSGIEAQVAEVSRETLQQLLDILLAEEESARRSH--NPRLHLEAIVCRM 358 >UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma and tau n=1 Tax=Moritella sp. PE36 RepID=A6FBQ8_9GAMM Length = 814 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 75/303 (24%), Positives = 118/303 (38%), Gaps = 27/303 (8%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + LV + + R HHA L+ G+G + ++ L C++ Sbjct: 9 KWRPHNFQQVVGQQHVLTALVNALEQDRLHHAYLLSGTRGVGKTTIARIFAKSLNCEKGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G + D + + V+ RE+ + + G KV + Sbjct: 69 TSTPCGECSTCVEIDQGCYVDLLEI---DAASRTKVEDTRELLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCLQFHLKCLTTEQISQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 L AL + + + GS AL+L A V Sbjct: 186 QLVHILSREHCQYELSALNSIAKAADGSMRDALSLTDQALSHG--------AGEVLYQTV 237 Query: 230 YSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTN--VDVPGLVAELANHLSPSRLQ 287 +L L+H L + + DA K A+V++ D L ELA+ L + Sbjct: 238 LDMLGTLDHSHMLQLLRLIVS--GDANKCMAKIAEVSSLGPDFDQLHVELASLLHRIAMA 295 Query: 288 AIL 290 IL Sbjct: 296 QIL 298 >UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 Tax=Clostridiales RepID=A9KQC7_CLOPH Length = 522 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 77/362 (21%), Positives = 127/362 (35%), Gaps = 49/362 (13%) Query: 1 MRWYPWLRPD-----------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLL 49 M Y RPD L +A R HA L G G + L++ + Sbjct: 4 MALYRKFRPDTFEDVKGQDHIVTTLKNQIKAKRIGHAYLFCGTRGTGKTTVAKILAKTVN 63 Query: 50 CQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 C+ P C C C+ +Q+ + + + + GVD +RE+ E++ G Sbjct: 64 CEHPIDGNPCNECAMCKAIQSQSSMNVIEI---DAASNNGVDNIREIVEEVKYSPTEGNY 120 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 KV + + +L+ A NALLKTLEEPP+ F LAT E ++ T+ SRC+ + Sbjct: 121 KVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTEVHKIPITILSRCQRYDFRRVTI 180 Query: 170 QYAVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG------DNWQARETLCQ 218 L + + AL R + GS AL+L + + Sbjct: 181 DEITKRLRVITEKEGIEAEEKALRYVARAADGSFRDALSLLDQCIAFYFGQSLTYDNVLD 240 Query: 219 ALAYSVPSGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHG 261 AL +V + LL + + L L L + L Sbjct: 241 AL-GTVDIEVFARLLRYIRKGSVTDCVAILEELIIQGRELTQFTIDFTWYLRNLLLAKTS 299 Query: 262 AA----QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLL 317 + D L+ + A L + + Q+ T + ++I L+ Sbjct: 300 EDMEEILEMSSDQLQLLKQEAQSCDTELLIRFIRIFSELSNQVKYATQ--KRVMIEVALV 357 Query: 318 RI 319 ++ Sbjct: 358 KL 359 >UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C334AE Length = 726 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 76/356 (21%), Positives = 128/356 (35%), Gaps = 43/356 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ--Q 52 ++ P + L + ++ R HA L G G + ++ + C Sbjct: 10 KYRPQTFDGLVGQKSIVLTLSNAIRSQRISHAYLFTGPRGTGKTSTARIFAKSINCLASD 69 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG+C CQ + G+ D + + GVD +RE+ E+ K+ Sbjct: 70 APSISPCGNCEACQTINKGSSLDVIEI---DAASNTGVDNIREIIEQAKFAPMQLRYKIY 126 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 V + +L+ AA NALLK LEEPP F LAT +P+R+L T+ SRC+ + Sbjct: 127 IVDECHMLSTAAFNALLKILEEPPKHVIFILATTDPQRVLPTIISRCQRFDYRRIAIEEI 186 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNW---QARETLCQALAYSV 224 V L + + DAL ++S G A +L + + L + Sbjct: 187 VQHLGKIAKEENINIEIDALNLVAKISNGGLRDAESLLDQLSLFTGKINSEKVNDLVGLI 246 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLL------MDALKRHHG---------------AA 263 D SLL A+ + + + L+ + L+ Sbjct: 247 SERDLLSLLQAIRSNNSKLIIEFCGQLINKGKEPLTILQNIANFHLNLLISKVSPQCPEL 306 Query: 264 QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + + D+ + A R+ + + QL S T L I +LL + Sbjct: 307 TMISKDIWKELCIEAEFWKTDRILKNQQKLRNSEIQLKSTTQ--PYLWIEIILLDL 360 >UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q117S8_TRIEI Length = 695 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 131/354 (37%), Gaps = 43/354 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ--Q 52 ++ P D + L + R A L G G + L++ L C Sbjct: 9 KYRPQTFADLVGQDVIAQTLTNAIHTKRIAPAYLFTGPRGTGKTSSARVLAKSLNCLSYD 68 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C + G+ D + + GVD +RE+ E+ KV Sbjct: 69 HPTPSPCGTCNVCVGITKGSTLDVIEI---DAASNTGVDNIRELIERSQFAPVQCRYKVY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ +A NALLKTLEEPP F LAT +P+R+LAT+ SRC+ P + Sbjct: 126 VIDEVHMLSVSAFNALLKTLEEPPKGVVFILATTDPQRVLATIISRCQRFDFRRIPLEAM 185 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ---ALAYSV 224 V L ++ ++ +A+ +++ G A +L + A E + L +V Sbjct: 186 VKHLHHIAIEEKIDITTEAIQMIAQIAQGGLRDAESLLDQLSLLAGEITVERVWDLVGAV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDAL--KRHHGAAQV 265 P D L+ A+ + + L LA D L K + + Sbjct: 246 PERDLMVLVEAIAADNSIKVLKCTRQIMDRGKEPIIVLQNLAGFYRDLLIAKTAPTSKNL 305 Query: 266 TNVDVP--GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLL 317 + P + + + + A + Q+ + T L + LL Sbjct: 306 VALTKPTWEKLCQFSQDWDIGTILAGQKHLQTSEVQIKNTTQ--PRLWLEVTLL 357 >UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0B5_LYSSC Length = 636 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 77/353 (21%), Positives = 137/353 (38%), Gaps = 44/353 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L S + + HA L G G + ++ L CQ P Sbjct: 11 KYRPQGFDNLIGQNHVKNTLENSIKHNKVAHAYLFTGPRGTGKTSAAKIFAKLLNCQSPI 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C CQ ++ D + + GVD +R++ EK+N G KV + Sbjct: 71 DYNPCGECVCCQ----DSNTDIIEM---DAASNNGVDDIRDLREKVNYAPAFGKKKVYII 123 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPPA F LAT EP ++ AT+ SRC+ + + V Sbjct: 124 DEVHMLSTAAFNALLKTLEEPPAHIVFILATTEPHKIPATILSRCQRYDFRRISQDDIVH 183 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 + + V + + AL +++AG AL+L + + + +V Sbjct: 184 RMKTIVEAESVEIEEQALRLISQIAAGGMRDALSLLDQAISKVEGKVTLQDIIEITGAVD 243 Query: 226 SGDWYSLLAALNHEQAP-----------------ARLHWLATLLMDAL--KRHHGAAQVT 266 + +L+ +N L + L D L ++ A + Sbjct: 244 TRKIGTLIQYINQSNIEGALEHFNTCFESGQEPHFFLEEMMIYLRDILVNRKLGEKATLK 303 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 E+AN + P ++ + + + + +LL+ ++ + Sbjct: 304 KGHNDPQFYEIANSVGPDKIYDYMDLLNKAHSNMKFHNDV--QLLMEMTIIEM 354 >UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUJ6_9CLOT Length = 564 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 76/354 (21%), Positives = 131/354 (37%), Gaps = 41/354 (11%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + D L +AGR HA L G G L++ + C + Sbjct: 11 KWRPQVFSDVVGQPQVTVTLQNELKAGRIAHAYLFTGSRGTGKTTCAKILAKAVNCLSLK 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G+ D + + GV+ +R + E+ + +V + Sbjct: 71 EGDPCGECESCVGIDNGSVMDVVEI---DAASNNGVENIRNLREEASFTPAAAKYRVYII 127 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPPA F LAT E +L AT+ SRC+ + Sbjct: 128 DEVHMLSIGAFNALLKTLEEPPAHVVFILATTEVHKLPATILSRCQRFDFHRIDPEVIAD 187 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQAL---AYSVPS 226 L + ++A L R++ G AL+L ++ E + + A Sbjct: 188 RLQFVAGEENAHLEREAALLIARIADGGMRDALSLLDQCMGRSSEITLEVVSETAGLAGR 247 Query: 227 GDWYSLLAAL---NHEQAPARLHWLATLLMDALKRHHGAA------------------QV 265 +SL + N QA ++ L D ++ A V Sbjct: 248 DHLFSLADTVLRQNGGQALEQIDELHKASKDMVRLCEELAGHFRNLMLLKTMKNPQNLIV 307 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + D + A + + + + +E++ G +R + + LL++ Sbjct: 308 VSQDEYQKLQVQAEAFTLAGTIHAIDVLQAAKERM--FRGFDRRVELEMALLKL 359 >UniRef50_Q2SIR6 DNA polymerase III delta prime subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIR6_HAHCH Length = 335 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 87/322 (27%), Positives = 153/322 (47%), Gaps = 4/322 (1%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG-HKSCGHCR 63 PWL + V + A+L+ G+G + L +++LLC+Q + + CG CR Sbjct: 13 PWLSKTWRDWVGLAHNDKVPSAILVAGQSGVGKNRLTSEYAKFLLCEQAKRLERPCGDCR 72 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C+L++AGTHPD +APE G + +D VR + + + ++ ++ +T A + Sbjct: 73 SCKLIEAGTHPDLQWVAPEDGAKAIKIDQVRGLGDFIYAKPQISRRRICVLTPAEAMNAY 132 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 +ANA+LKTLEEPPA L +++ LL T+RSRC+++ LA P + V WL+ ++ + Sbjct: 133 SANAILKTLEEPPASVVILLVSQQISLLLPTIRSRCQIYTLAAPDRESVVNWLT-QLDVP 191 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQAR-ETLCQALAYSVPSGDWYSLLAALNHEQAP 242 ++ + + G P ALA D + R E L L Y D ++L + Sbjct: 192 KERAYSLTESAGGRPLTALAWHSQDILELRAEVLADWLNYLEGRVDAFTLAETWSKLDLE 251 Query: 243 ARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMS 302 WLA L L + + +A + L +L ++ ++ I+ L+ Sbjct: 252 RLADWLAIWLKQLLTATQ-IGEGEGSETEATLAGVGARLDTQQLVSLYAELIEIKRSLVE 310 Query: 303 VTGINRELLITDLLLRIEHYLQ 324 +N +L++ LL + + Sbjct: 311 QRNLNPQLMLESWLLANKRVRK 332 >UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5D8_LARHH Length = 769 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 90/352 (25%), Positives = 135/352 (38%), Gaps = 39/352 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + R HHA L+ G+G + L++ L C++ Sbjct: 9 KWRPRRFADLVGQEHVVRALSNALAGQRLHHAYLLTGTRGVGKTTIARILAKSLNCERGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G + CG C C+ + AG D + + G+D +REV E G KV + Sbjct: 69 GAEPCGECAACRQIDAGRFVDLLEI---DAASNTGIDNIREVIENAQYAPTAGRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPPA F LAT +P+++ T+ SRC L Q Sbjct: 126 DEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFALRNMTPQQVSG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ + AL R ++GS AL+L RE +A+ +V Sbjct: 186 HLAHVLATEGIEFESPALALLARAASGSMRDALSLLDQAIAYGEGVVREDGVRAMLGAVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------------LMDALKRHHGAAQVTNVD 269 ++LLAAL A L L L + Q D Sbjct: 246 RRYLFTLLAALADGDGAAVLDEARELAARGIGFDAALEELAQLFYQIALMQAVPQAIADD 305 Query: 270 VP--GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 P +A LA ++P +Q L + +L LLR+ Sbjct: 306 EPEREALAALAGSMAPEDVQLYYQMAVQGGRDLPLAP--DEQLGFNMALLRM 355 >UniRef50_Q606M1 DNA polymerase III, delta prime subunit n=1 Tax=Methylococcus capsulatus RepID=Q606M1_METCA Length = 335 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 98/324 (30%), Positives = 150/324 (46%), Gaps = 10/324 (3%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL P +L A +AGR LLI G+G L +R LLC P +CG C Sbjct: 8 YPWLAPARRRLRAYLEAGRLPQGLLISGAAGVGKGVLADDFARRLLCASPPAEGACGTCH 67 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C+L+ AG HPDY + PE+ + V+ VR + ++L+ + G ++VV + A + A Sbjct: 68 ACRLVVAGNHPDYLHIEPEEAGKRITVELVRRLIDRLSLKPQYGASRVVVIRPAHAMNMA 127 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AAN+LLKTLEEP T F L + P +L AT+ SRC+ + P + A+ WL + Sbjct: 128 AANSLLKTLEEPDPHTLFLLISERPAQLPATVLSRCQRLDVRLPEREEALRWLRGQGVGE 187 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARET--LCQALAYSVPSGDWYSLLAALNHEQA 241 + A L ++ G+P A+ L G + R +A D ++ E Sbjct: 188 E--AEALLAMAGGAPVRAVELHGGGDLAQRRRMLFDDWVAVLRDESDPLAVAERWAKEDG 245 Query: 242 PARLHWLATLLMDALKRHHGAA----QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIR 297 L WL + D ++ A ++ N D+ + + A L L A L V R Sbjct: 246 ETVLIWLRGWIADLIRISSTEASVPLRLANADLEPGLRKAAAGLDLRALFACLDGVDAAR 305 Query: 298 EQLMSVTGINRELLITDLLLRIEH 321 L NR+L++ ++L+ Sbjct: 306 RNLEGQA--NRQLVMEEILINWNR 327 >UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V121_9FIRM Length = 615 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 81/355 (22%), Positives = 132/355 (37%), Gaps = 43/355 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 RW P D L + +G+ HA L G G + L+R L C + Sbjct: 9 RWRPERFADLVGQEHISRTLSRAVTSGQISHAYLFTGPRGTGKTSTAKILARALNCAEGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CGHC C+ + G+ D + + + G+D +R++ E + G K+ + Sbjct: 69 TLTPCGHCDSCRSISDGSSMDVFEI---DAASNRGIDEIRDLRESVKFAPTEGLYKIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F LAT EP ++ AT++SRC+ + Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPERVIFILATTEPHKVPATIQSRCQRYDFHRITVTEICD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALA-------LFQGDNWQAR--------- 213 L + +DAL + G AL+ L +G R Sbjct: 186 RLIYVCKESGIEAEEDALGIIAVQADGGMRDALSILDQCTALAEGTLTAERVQEALGLVG 245 Query: 214 ETLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHG----AAQ 264 + +A + + D +L+ L+ + L LA + G AA+ Sbjct: 246 RAWIRQMAEQIAARDAAALITQLSQLLQNGRELRQVLVELAQYFRSLMIAGVGGTISAAE 305 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + D + A S + IL + + L + + LL+ + Sbjct: 306 LCAGD-AEQLRADAAQFSEDEIMTILRRLNETMQDLRTSPQ--PRIAAETLLIEL 357 >UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MH32_BDEBA Length = 621 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 76/361 (21%), Positives = 129/361 (35%), Gaps = 43/361 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + + GR HALL G G + L++ L C Q Sbjct: 25 KWRPQSFTDVVGQNHITQTLSNALKNGRLPHALLFTGPRGTGKTSSARILAKALRCPNAQ 84 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C + G+ D + G + GVDA+RE+ + + G K+ + Sbjct: 85 NFVPCNDCYSCNEIAGGSSIDVIEI---DGASNNGVDAIRELRDTVAFMPSSGKYKIYII 141 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NALLKTLEEPPA F +AT E ++ T+ SRC+ + Sbjct: 142 DEVHMLSTSAFNALLKTLEEPPAHVVFIMATTEVHKIPQTILSRCQRFDFRRISTRSITE 201 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG-----------------DNWQA 212 L VT +AL R GS + +L Sbjct: 202 RLKLICDREGVTADDEALWVVARQGDGSMRDSQSLLDQVITFANGPLTRASVVEILGLTD 261 Query: 213 RETLCQALAYSVP--SGDWYSLLAALN------HEQAPARLHWLATLLMDALKRHHGAAQ 264 R L + L + S ++ + H + L + LL+ + + Sbjct: 262 RALLFETLNALIDRNSQAVLKVIEKIAAAGFEPHLYSQDLLEMIRNLLLIKVSEAQASQI 321 Query: 265 VTNVD-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 + D ++E+A L + + + + +++ LLR+ Sbjct: 322 LEMPDSELQALSEMAQRLPEEDIHMLFDMALKGGSDIPRAQ--DPRIVLEVTLLRMASAP 379 Query: 324 Q 324 + Sbjct: 380 K 380 >UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEE5_METSD Length = 610 Score = 282 bits (723), Expect = 8e-75, Method: Composition-based stats. Identities = 86/366 (23%), Positives = 136/366 (37%), Gaps = 41/366 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L L + + R HHA L G+G L L++ L C+ Sbjct: 9 KWRPKLFEALVGQEHVVRALTNALEQQRLHHAYLFTGTRGVGKTTLARILAKSLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD++RE+ + +G KV + Sbjct: 69 TAHPCGVCSACVDIDRGRFVDMLEV---DAASNTQVDSMRELLDNAQYAPTVGRFKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPPA F LAT +P+++ T+ SRC L + Sbjct: 126 DEVHMLSRSAFNAMLKTLEEPPAHVKFILATTDPQKMPVTVLSRCLQFNLRQMSTPAITS 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + AL R + GS AL+L + E+ +A+ ++ Sbjct: 186 HLQEVLAKENIPSDSIALQLISRAANGSMRDALSLLDQAIAYGGNRVNESEVRAMLGAID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDA------LKRHHGAAQVTNVD 269 Y LL AL + P+ + ++ L D L + +D Sbjct: 246 QSYLYGLLDALIAQDGPSLMAQAKSMEERSLSFDTALADLAQLLHHLAVAQTVPESIPLD 305 Query: 270 VPG--LVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELL-ITDLLLRIEHYLQPG 326 +P + +LA L ++Q R L E T LLR+ + Sbjct: 306 LPERTALLDLATKLPADKVQLYYQIALLGRRDLGLAPD---EFAGFTMCLLRMLAFSNES 362 Query: 327 VVLPVP 332 P P Sbjct: 363 TSKPAP 368 >UniRef50_B5FG33 DNA polymerase III, delta' subunit n=3 Tax=Aliivibrio RepID=B5FG33_VIBFM Length = 327 Score = 282 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 13/324 (4%) Query: 2 RWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGH 61 + YPW +++ Q R HA+L G G +AL+ + LLC QG + CG Sbjct: 4 KLYPWQTSLWQQWQQLIQNDRLPHAILCAMPIGAGREALVQYFADTLLCLT-QGIEPCGF 62 Query: 62 CRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT 121 C C+L+++ THPD + + PE ++ V+ +R+ E ++ +V+ + A +T Sbjct: 63 CHSCELIKSQTHPDLHWIKPETEGKSISVEQIRQCNSWALESSQFNAKRVIIIDPAEKMT 122 Query: 122 DAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT 181 ++AANALLKTLE PP F L P +LL T+RSRC++ + + + WL Sbjct: 123 ESAANALLKTLEAPPKNCQFVLLADSPHQLLPTIRSRCQVWHQSKIDAESITIWLKETEN 182 Query: 182 MSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSG-----DWYSLLAAL 236 +S + ++ L+ P A + +Q + L V S D + L Sbjct: 183 LS--VSMQSIALNDSLPLAVKSFYQDKKQALHKQLLSDFESCVKSDFCQTADIVKTVLKL 240 Query: 237 NHEQAPARLHWLATLLMDALKRHHGAAQ-VTNVDVPGLVAELANHLSPSRLQAILGDVCH 295 E L WL+ LL D KR G Q + D L+ LA LS + + + Sbjct: 241 ESEG----LTWLSYLLADIQKRQMGIMQPWVHCDEIKLIESLAKTLSSNVVYKQYIALNS 296 Query: 296 IREQLMSVTGINRELLITDLLLRI 319 ++EQL S G+N+ELL+T + Sbjct: 297 LQEQLDSFPGLNKELLLTQWMFEF 320 >UniRef50_A6GQQ4 AAA ATPase, central region n=1 Tax=Limnobacter sp. MED105 RepID=A6GQQ4_9BURK Length = 586 Score = 282 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 76/332 (22%), Positives = 115/332 (34%), Gaps = 36/332 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + R HHA L G+G + L+R + C+Q Sbjct: 12 KWRPRDFDSLVGQAHVVKALSHALDNQRLHHAYLFTGTRGVGKTTIARILARAVNCEQGI 71 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C+ C + G D + VD +R + E G KV + Sbjct: 72 SRTPCGKCQACVEISQGRFVDLLEV---DAATNTRVDEMRALLENAMYAPTAGRYKVYVI 128 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPP F LAT +P+++ AT+ SRC L P Sbjct: 129 DEVHMLSTSAFNAMLKTLEEPPGHVLFILATTDPQKIPATVLSRCLQFALRQLPPDQLAD 188 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ AL + + GS AL+L E + + ++ Sbjct: 189 HLAHILSEEQIAFEPGALRLLAKAARGSVRDALSLTDQAIAYSAGHVTEDTVRTMLGAID 248 Query: 226 SGDWYSLLAALNHEQAPARLHWL---------ATLLMDALK--------RHHGAAQVTNV 268 + LL AL A L ++D L H + Sbjct: 249 QQVVHQLLQALAQGDGKALLELSNALAAASAPFGAILDELAAIAYRLSVAHFAGGLDADD 308 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + L LQ I H R +L Sbjct: 309 PDQAALQNLQGAFGAEDLQLIYQIATHARAEL 340 >UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Tax=Gloeobacter violaceus RepID=Q7NK69_GLOVI Length = 632 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 84/352 (23%), Positives = 133/352 (37%), Gaps = 41/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P P L + +AGR HA L G G +++ L C Sbjct: 9 KYRPQRFGDVVGQGPIVTTLTNALKAGRIAHAYLFTGSRGTGKTTTARLIAKALNCIHGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G+ D + + GVD +RE+ E+ KV + Sbjct: 69 TPDPCGRCEQCLAIATGSALDVIEI---DAASNTGVDNIRELIERAQFAPVQSRQKVYIL 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA N LLKTLEEPPA F LAT +P+++L T+ SRC+ P V Sbjct: 126 DEVHMLSSAAFNCLLKTLEEPPAHVTFVLATTDPQKVLPTVISRCQRFDFRRIPLTDMVK 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAA------LALFQGDNWQAR---------E 214 L ++ + +A+ +++ G A LAL +G R E Sbjct: 186 HLEEIAWKEDIDIEHEAVELVAQIAQGGLRDAESLLDQLALLEGTIGAERIWQLVGAVPE 245 Query: 215 TLCQALAYSVPSGDWYSLLAAL-----NHEQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 + + +GD L+ + + ++ L L D L H + V Sbjct: 246 RELLVIGECIQAGDSTRLIEQVRRLLDSGKEPLQVLQDLLGFYRDLLIAHTAPDRRDLVA 305 Query: 270 VP----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLL 317 V + E A LS +L A+ + Q+ + T L + LL Sbjct: 306 VTAASWQQMCERAKTLSIPQLLALQERLRQAEPQIKTSTQ--PRLWLEVGLL 355 >UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clostridiales RepID=B0TAU1_HELMI Length = 606 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 86/354 (24%), Positives = 131/354 (37%), Gaps = 42/354 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P + L + R HA L G G L++ L C Sbjct: 10 WRPQSFQELVGQEHVSRTLQNAIAYQRIAHAYLFCGPRGTGKTTTAKILAKALNCSGHGP 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G D + + GVD +RE+ E++ + G KV + Sbjct: 70 VRPCNDCLNCRAINTGASHDVLEI---DAASNRGVDEIRELREQVKYAPQEGNYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPPA F LAT E ++ AT+ SRC+ V Sbjct: 127 EVHMLTTEAFNALLKTLEEPPANVIFVLATTEVHKIPATILSRCQRFDFRRLGVNEIVDR 186 Query: 176 LSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVPS 226 L R E+ S++ L R + G AL + A + A+ +V Sbjct: 187 LERICRHHEIAASRETLSFIARKAEGGMRDALGILDQCVSYAGNEIDSGDVTAILGAVAD 246 Query: 227 GDWYSLLAALNHEQAPARLHWLATLL----------MDA---------LKRHHGAAQVTN 267 Y + L ++ L L L+ D L+ GAA + + Sbjct: 247 EILYDMTQGLAEDRLSDVLMQLNDLINRGKEVRPLTRDLLGHYRDRLILRTVPGAADLVD 306 Query: 268 V--DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + D+ V E + S S LQA + + + T +L+ +RI Sbjct: 307 MPDDIAAKVKETGHVYSVSDLQACIALLSQAENDMKWTTH--PRILLEVAFVRI 358 >UniRef50_A0YC05 DNA polymerase III subunits gamma and tau n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YC05_9GAMM Length = 588 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 81/355 (22%), Positives = 132/355 (37%), Gaps = 37/355 (10%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + L+ + R HHA L G+G ++ L++ L C + CG C C Sbjct: 4 QEHVLKALINALDHNRLHHAYLFTGTRGVGKTSIARILAKCLNCDVGVSSEPCGQCSACL 63 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + G D + + V+ RE+ E + G KV + + +L+ + N Sbjct: 64 SISEGRFVDLIEV---DAASRTKVEDTRELLENVQYAPTAGRFKVYLIDEVHMLSTNSFN 120 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVT 181 ALLKTLEEPP F LAT +P++L AT+ SRC L + V L +T Sbjct: 121 ALLKTLEEPPPHVKFLLATTDPQKLPATILSRCLQFNLKNMSPERIVVHLQNVLEQEMIT 180 Query: 182 MSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPSGDWYSLLAAL- 236 + AL R + GS AL+L + + E +++ ++ Y ++ AL Sbjct: 181 YEEPALWLLGRSADGSMRDALSLTDQAISFGSGKLLEADVRSMLGTIDRSAVYEIVEALI 240 Query: 237 -------------NHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVP----GLVAELAN 279 E AP L L LLM + A D + ++ Sbjct: 241 AENGAQVLAAVNNMAEHAPDYLSALEELLMLLHRIAIAQAVPDATDNSFGDGAKIIAMSA 300 Query: 280 HLSPSRLQAILGDVCHIREQLMSVTGIN--RELLITDLLLRIEHYLQPGVVLPVP 332 L+ Q R L + E+++ +L +P + +P Sbjct: 301 LLTAEDTQLFYQLGLTGRRDLSLAPDLRSGFEMVLLRML-----AFKPAGIPQLP 350 >UniRef50_A0L8T4 DNA polymerase III, delta prime subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8T4_MAGSM Length = 343 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 91/335 (27%), Positives = 144/335 (42%), Gaps = 14/335 (4%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGH---------- 56 + + L + + GR H LL G+G AL R LCQQ Sbjct: 10 QQEAMDALTGAVRTGRLAHGLLFYGPAGVGKRLTARALVRRTLCQQVAEGALNAAGDRLL 69 Query: 57 KSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTD 116 CG C C+ ++ G HPD + E+G+ L VD +RE+ + + L KV + + Sbjct: 70 DGCGVCASCKRVEGGGHPDLLWMEKEQGRTRLRVDQIRELAQFVALTPLLSPYKVAVIDE 129 Query: 117 AALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL 176 +L+ +AANALLKTLEEPP + L T P LL T+RSRC+ P EQ L Sbjct: 130 VSLMNASAANALLKTLEEPPPHSLLILTTCTPGALLPTIRSRCQAVRFVPLDEQTLGQLL 189 Query: 177 SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAAL 236 + ++ + +A+ ++ GS G AL L G R+ L Q L + G + + Sbjct: 190 RQHTSLEPGMVESAMEMAGGSIGRALELCDGTLLNQRQELWQGLV-LLQRGAGLDTVCEM 248 Query: 237 NHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHI 296 + A +L++ ++H A + + D P + + + + L C + Sbjct: 249 AAQWGSAERFENTVMLLEFWFQNHIRASLRDYD-PSVNQQELQASNRAWLSLAQQFACMV 307 Query: 297 REQLMSVTGINRELLITDLLLRIEHYLQPGVVLPV 331 E + +NR L++ L +RI LP Sbjct: 308 DEA--RIFNLNRPLMLEHLFIRISRLATQEGCLPS 340 >UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LV54_9FIRM Length = 691 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 79/303 (26%), Positives = 118/303 (38%), Gaps = 31/303 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + AGR HA L G G + L++ L C++ Sbjct: 36 QWRPGSFKDLVGQTAVSRTLSHAISAGRIAHAYLFSGPRGTGKTSTAKILAKSLNCEKGP 95 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C + GT D + + + G+D +R++ EK+ G KV + Sbjct: 96 TPEPCGVCKNCTKIADGTALDVFEI---DAASNRGIDEMRDLREKVKFTPAEGRYKVYII 152 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPPA F LAT EP ++ AT++SRC+ + Sbjct: 153 DEVHMLTTEAFNALLKTLEEPPAHVVFILATTEPHKVPATIQSRCQRFDFRRITVEEIEA 212 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ ++AL R + G AL+L D + + Sbjct: 213 RLAYVAQEMKIPCEKEALRLIARQADGGMRDALSLLDQCASLDGDTLTAACVEENLGLIG 272 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 Y L A+ L +A LL D L+AEL HL Sbjct: 273 HEPIYRLTKAIGERAKGEVLETIAELLA------------LGKDPMQLLAELTIHLRSLM 320 Query: 286 LQA 288 + Sbjct: 321 IYE 323 >UniRef50_C8W2Q8 DNA polymerase III, delta prime subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2Q8_DESAS Length = 358 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 84/323 (26%), Positives = 133/323 (41%), Gaps = 11/323 (3%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + L + GR HA L G+G ALS LLC + +CG C C+ Sbjct: 35 HKSLIRGLEQAVATGRVAHAYLFSGQHGVGKKTTALALSASLLCDFNRSGDACGKCTSCR 94 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + G HPD + ++P+ ++ ++ +R++ +K + ++ + A +T AAN Sbjct: 95 QLVNGNHPDLHIISPDGA--SIKIEQIRDLQQKARYKSYQNKHQIFIIDQAEGMTREAAN 152 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDA 186 LK LEEPP +T F L + EPE LL T+ SRC+ + + L + ++Q+ Sbjct: 153 CFLKILEEPPEQTVFILISAEPELLLPTVISRCQPMSFKDLGLEEISSLLIQLSGVNQEK 212 Query: 187 LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAAL-----NHEQA 241 A +++ GS G AL+ F D L L+ S LL + Sbjct: 213 AGLAAQMARGSIGRALSYFNDDQQYKLRELVIRLSQSTRRSAISLLLQEVEELLGKKVNI 272 Query: 242 PARLHWLATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 L L+ D L K H V N D ++ A H + +L L + + Sbjct: 273 FEMLEMLSLWYRDLLIWKSSHNEKLVFNRDKLDVIDTEAEHYTLEKLVNALEMSEMTKYK 332 Query: 300 LMSVTGINRELLITDLLLRIEHY 322 LM NR + LLL + Sbjct: 333 LMR--NANRRAALDVLLLSLTRL 353 >UniRef50_C0CSD7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CSD7_9FIRM Length = 336 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 124/323 (38%), Gaps = 12/323 (3%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 E L + + G+ H+ + G G + + L C++ G + C C C+ Sbjct: 17 HEDVVEHLKNAIETGKVSHSYIFYGDKGAGKKLMASTFAMALQCEK-DGFEPCQTCDSCK 75 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAA 125 HPD + EK N++ +D +R+ + ++ K+ + +A +T A Sbjct: 76 KALGKNHPDIIQVTHEKP-NSISIDEIRQQLILDVDIKPYNSEYKIYIIPEADKMTPQAQ 134 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQD 185 NALLKT+EEPP+ L T + LL T++SRC + + +L + + Sbjct: 135 NALLKTIEEPPSYAVIILLTENVDGLLPTIQSRCIRLDMKVVDDALVKDYLMEHLQVPDY 194 Query: 186 ALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAAL-----NHEQ 240 + GS G A +++ + +V + + L+ A+ + + Sbjct: 195 QAEVDASYAQGSIGKAKEAATSEDFAKMTENVLHILKNVNRMEVFELVDAIKEISQDKQN 254 Query: 241 APARLHWLATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 L + D L K + + E A+ S L+ IL + + Sbjct: 255 VNDYLDMMMFWFRDVLMFKATREIDNLVFKQEINYIREQASERSYEGLEKILEALEKTKT 314 Query: 299 QLMSVTGINRELLITDLLLRIEH 321 +L + +N +L + L L I Sbjct: 315 RLRA--NVNFDLAMELLFLTIRE 335 >UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E6B7 Length = 834 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 116/333 (34%), Gaps = 35/333 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + R HHA L G+G + ++ L C Sbjct: 9 KWRPNKFSELVGQEHVVTAISNALDNNRLHHAYLFTGTRGVGKTTIARIFAKSLNCDTGL 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + VD RE+ + + G KV + Sbjct: 69 SANPCGECGTCRDIEQGRFVDLLEI---DAASRTKVDDTRELLDNVQYRPTQGDYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L + Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKALSREQIQQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L + AL R + GS AL+L Q + + + Sbjct: 186 QLSHVLTQEHINHEPAALAQLARAANGSMRDALSLTDQAIAQGNNQISTVVVSDMLGLMD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL---------LMDALK--RHHGAAQVTNVDVPGLV 274 +L ++ A + +L ++D L H A +V L Sbjct: 246 KNQILKILHSMIEGDKIAVFEQVESLAQTSPNYAHVLDELMSLLHQIAMTQVVPEVCKL- 304 Query: 275 AELANHLSPSRLQAILGDVCHIREQLMSVTGIN 307 +S + + G + QL+ +N Sbjct: 305 ----ETISARAIYKLAGSISKEHVQLLYQMALN 333 >UniRef50_B7VL96 DNA polymerase III subunit tau n=11 Tax=Vibrionales RepID=B7VL96_VIBSL Length = 752 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 116/304 (38%), Gaps = 29/304 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPTKFKEVVGQAHVLTALENALSQNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ RE+ + + G KV + Sbjct: 69 TSTPCGECATCKEIDEGRFVDLLEI---DAASRTKVEDTRELLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L P Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISVDNIHE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALA---YSVPS 226 L VT AL + GS AL+L QA+A +V + Sbjct: 186 QLDHILEQENVTSEPRALGMIAHAADGSMRDALSLSD-----------QAIALGNGNVVT 234 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRL 286 +L L+ +QA L +++ A V+ GL+++LA L + Sbjct: 235 DTVAHMLGTLDTDQAIHLLEAISSKQPQQAMACIQALAENGVEWDGLLSQLATQLHRLAM 294 Query: 287 QAIL 290 L Sbjct: 295 YQAL 298 >UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Tax=Cyanobacteria RepID=Q8DJU0_THEEB Length = 603 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 84/339 (24%), Positives = 125/339 (36%), Gaps = 41/339 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P D L + R A L G G + L++ L C + Sbjct: 9 KYRPQRFSDLVGQGAIATTLTQALLKERIAPAYLFCGPRGTGKTSSARILAKSLNCLRSS 68 Query: 54 -QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + GT D + + GVD +RE+ EK KV Sbjct: 69 KPTPDPCGQCEVCRQVANGTSLDVIEI---DAASHTGVDNIRELIEKAQFAPVQCRYKVY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ +A NALLKTLEEPP + F LAT +P+R+L T+ SRC+ P Sbjct: 126 VIDECHMLSVSAFNALLKTLEEPPPQVVFILATTDPQRVLPTIISRCQRFDFRRIPLGEM 185 Query: 173 VTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG-DNWQARETLCQ--ALAYSV 224 V L ++ + +AL +LS G A +L + R T+ Q L +V Sbjct: 186 VAHLQNIADKEQIDIEPEALTLVAQLSQGGLRDAESLLDQLSLYPERITVEQVWQLTGAV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLL---MDALKRHHGAAQVT-----------NVDV 270 P D LL A+ A + L LL D L A + D+ Sbjct: 246 PEQDLRQLLGAIARRDAVSVLEHTRQLLERGRDPLTILQNLASLYRDLLLAKTVPQRRDL 305 Query: 271 PGL-------VAELANHLSPSRLQAILGDVCHIREQLMS 302 L + LA S + + Q+ Sbjct: 306 VALTAETWQALIALAEAWSVEEILHAQEHLRTCEGQIKQ 344 >UniRef50_A7BV86 DNA polymerase III, delta prime subunit n=1 Tax=Beggiatoa sp. PS RepID=A7BV86_9GAMM Length = 334 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 89/319 (27%), Positives = 150/319 (47%), Gaps = 5/319 (1%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGHCR 63 PW ++++ + R HALL+ GMG L+ LLC+QPQ ++CGHC+ Sbjct: 6 PWHDALWQQIQSRVMQNRLPHALLLSGPQGMGKALFAQRLAENLLCEQPQADGQTCGHCK 65 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C L+ A THPD + + P + + V+ +RE+ + A +++ V A + Sbjct: 66 PCHLLLANTHPDLFKVEPVEAGKQISVNQIRELIQFSTLTASYNRHQIIIVNPAEAMNRN 125 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 AAN+LLK LEEP ++T L + + + LLAT+RSRC+ + P TWL +++ + Sbjct: 126 AANSLLKLLEEPSSDTVIMLVSHQYQALLATIRSRCQRIDFSHPEPTVTQTWLHNQLS-T 184 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS-VPSGDWYSLLAALNHEQAP 242 + + L LS +P AALAL Q D R+ L ++L D + + N + Sbjct: 185 KINIQLLLNLSNQAPLAALALAQTDGMAKRQILFESLTQLPTGKDDPIRIAESWNQLEVV 244 Query: 243 ARLHWLATLLMDALKRHHGAAQ--VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 L W+ MD ++ + + N D + LA +P +L +L + Sbjct: 245 QVLEWMLLWTMDIIRYGITEQRHSIINQDHQQTLQRLAKQFNPLKLFELLDLQTEAYRLI 304 Query: 301 MSVTGINRELLITDLLLRI 319 M T + + L+ + + Sbjct: 305 MGSTNVKPQGLLESIAIAW 323 >UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYU5_HALNC Length = 591 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 113/310 (36%), Gaps = 29/310 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPKSFAEMVGQGHVLQALTNALDQSRLHHAYLFTGTRGVGKTTVARIFAKALNCEHGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + GVD R++ E + G K+ + Sbjct: 69 SSTPCGVCSACVEIDQGRFVDLIEV---DAASRTGVDDTRDLLENVAYAPVRGRFKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + + + ++ NALLKTLEEPP F LAT +P++L T+ SRC L P Sbjct: 126 DEVHMFSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLRALPLSQIQQ 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGD- 228 L+ + AL + GS AL+L L QA+A++ D Sbjct: 186 HLADVLQKENIAFEPAALHLIAEAANGSMRDALSL-----------LDQAIAFTGGKLDT 234 Query: 229 --WYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRL 286 +L +H+ + L D L A V+ L+A+ + + Sbjct: 235 VQVSQILGLSDHQIIWDMIDALYQQSADRLFALVDEALDRAVEPAILLAQFIESIHQLAM 294 Query: 287 QAILGDVCHI 296 + + Sbjct: 295 GQWIQSMSAA 304 >UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dictyoglomus RepID=B5YCC7_DICT6 Length = 521 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 77/353 (21%), Positives = 124/353 (35%), Gaps = 42/353 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L S + HA L G G + L++ L C Q Sbjct: 8 KWRPQTFEEVVGQEHIVITLQNSLRYNHIGHAYLFAGPRGTGKTTIARILAKALNCVQGP 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C + G D + + G+D +R++ EK KV + Sbjct: 68 TPTPCLKCESCVEIAEGRSIDVIEI---DAASNRGIDEIRDIREKARLLPVRDRYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NALLK LEEPP F +AT EP+++ T+ SRC+ + Sbjct: 125 DEVHMLTNEAFNALLKILEEPPEHVVFIMATTEPQKVPLTILSRCQRFDFRRLTRDEVIK 184 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ +S+ AL S GS A++L + + + E L + L Sbjct: 185 QLAKIAEKEGAKISEGALRLIAIQSQGSMRDAISLLEQLLVYSDQEITEELARNLLGLPT 244 Query: 226 SGDWYSLLAALN---------------------HEQAPARLHWLATLLMDALKRHHGAAQ 264 Y+ AL + A L LL+ G Sbjct: 245 YEFTYNFAKALGEYNILEGYSLLQQIFQMGKNPQQFAKELLQHFRNLLLLKADERIGNLL 304 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLL 317 + + + + RLQ I+ + + +L +T N L++ +LL Sbjct: 305 SLTQEEFEELMQETKLYTIKRLQDIIDQLLILENRLRDLT--NAPLVMEMILL 355 >UniRef50_B8KYG2 DNA polymerase III, gamma and tau subunit n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KYG2_9GAMM Length = 672 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 129/352 (36%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + LV + R HHA L G+G + L++ L C Q Sbjct: 92 KWRPGNFQEMVGQQHVLRALVNALDNDRLHHAYLFTGTRGVGKTTVARILAKCLNCDQGV 151 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + V+ RE+ E + K+ + Sbjct: 152 SSTPCGTCDSCLEIAEGRSVDLLEV---DAASRTKVEDTRELLENVLYAPTRSRFKIYLI 208 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L AT+ SRC L + V Sbjct: 209 DEVHMLSGHSFNALLKTLEEPPPHAKFLLATTDPQKLPATVLSRCLQFNLKNMVPEEIVA 268 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L V +L R + GS AL+L + E+ +A+ +V Sbjct: 269 HLGKVLEEESVAFDNGSLALLARAAEGSMRDALSLTDQAIGFGDGGLAESDVRAMLGTVD 328 Query: 226 SGDWYSLLAAL---NHEQAPARLHWLATLLMDALKRHHGAAQVTNVD------------- 269 +L A+ + + A + +A+ D + A V + Sbjct: 329 RARVLDVLDAILDNDPKTLLAVIEQIASHAPDYVATLDDLASVLHQVTIAQWVPDAADPT 388 Query: 270 --VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 +A++A + +Q R ++ + + +LLR+ Sbjct: 389 ASQSERIAKVAASTTVDEVQLFYQFAAAGRPEVQRSP--DPRAALEMVLLRM 438 >UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 Tax=Aeromonas RepID=A4SMN2_AERS4 Length = 865 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 87/369 (23%), Positives = 139/369 (37%), Gaps = 41/369 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L+ G+G + L++ L C+Q Sbjct: 9 KWRPHTFEQVVGQHHVLTALTNALDQGRLHHAYLLSGTRGVGKTTIARILAKSLNCEQGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ RE+ + + G KV + Sbjct: 69 SSHPCGVCDTCREIDQGNFVDLLEI---DAASRTKVEDTRELLDNVQYRPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPITILSRCLQFHLKSLDQTQIAK 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ALLA + + GS AL+L N R A+ ++ Sbjct: 186 QLECVLDQEAQPFEPRALLALAKAADGSMRDALSLTDQALAHGNGSVRLESVLAMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAP---ARLHWLATLLMDALKRHHGAAQVTNVDVPGL--------- 273 + LL A+ + A A++ +ATL D + H + + Sbjct: 246 HRHLHQLLEAILRQDAAATMAKITEIATLGPDFDQLHAELEGLLHRVAMAQLLPATVQEQ 305 Query: 274 ------VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDL-LLRIE---HYL 323 + +LA +SP +Q V R+ L L +T L +L + Sbjct: 306 GADAESLLQLAQAMSPEEVQLCYQIVLGGRKDLPWAPDGRTSLEMTCLRMLAFSPRREAV 365 Query: 324 QPGVVLPVP 332 P + +P Sbjct: 366 HPANLTVLP 374 >UniRef50_Q8K9J2 DNA polymerase III subunit delta' n=4 Tax=Buchnera aphidicola RepID=HOLB_BUCAP Length = 328 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 173/308 (56%), Gaps = 2/308 (0%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M+WYPWL ++K++ ++ + HHA+LI+ GMG L++ +S++LLC +P+G C Sbjct: 1 MKWYPWLIKPYKKIIRLHERKKAHHAILIKTQKGMGVFKLVWFISKWLLCLKPKGTNFCD 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 +C GC+LM A HPD++T+ EK + VD++R + EK+ + A+ G K++++ + L Sbjct: 61 NCHGCKLMSANNHPDWHTIINEKN-DVFDVDSIRVINEKIFKRAQQGNNKIIFLPNVHKL 119 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 T++A NALLK LEEPP + WFFL +L +TL+SRC L+ L P E+ ++ WL Sbjct: 120 TESAVNALLKILEEPPEKNWFFLIDYNYLKLHSTLKSRCFLYRLPLPLEKESLNWLKNNN 179 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ 240 + L +LR++ SP +A + D W R+ L ++L++S+ + +L L + Sbjct: 180 KKDNISNLTSLRINQDSPISAKNFIESDLWDERKNLYKSLSHSIKDKNLLKILPVLCKKN 239 Query: 241 APARLHWLATLLMDALKRHHGA-AQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299 ++ W+ LL DA+K + ++ N D L+ + + L + R Sbjct: 240 TIMKIDWICLLLFDAVKTNFNERKKLINCDQIKLINFFSKKYNNILLNKSIRKWTKCRYI 299 Query: 300 LMSVTGIN 307 L SV+ IN Sbjct: 300 LSSVSSIN 307 >UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 Tax=Brachyspira RepID=C0QV83_BRAHW Length = 527 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 74/367 (20%), Positives = 141/367 (38%), Gaps = 49/367 (13%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + + S + HA L G+G +L +++ L C Sbjct: 11 KYRPQTFEEVIGQEHITKTISKSIAQKKIAHAYLFSGAHGVGKTSLARIIAKALNCVNGP 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C ++ GT D + G + G++ +R + E + G KV + Sbjct: 71 TDKPCGVCPSCTQIENGTPLDVIEI---DGASNRGIENIRTIIENVRISPVAGKYKVYII 127 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +T+ A NALLKTLEEPPA F LAT E ER+L T+RSRC+ + + Sbjct: 128 DEVHQITNEAFNALLKTLEEPPAHVVFILATTEAERVLPTIRSRCQQYTFKSLGIEDLEK 187 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ----------------------G 207 L + ++A+ + + GS + + + G Sbjct: 188 ILKGILDKENIKYDEEAIFLIAKQARGSVRDSETILEKMIAYTTDKKYITSADVNAVVGG 247 Query: 208 DNWQARETLCQALAYSVPSGDWYSLLAALNHE--QAPARLHWLATLLMDALKRHHGAAQV 265 +N+ + + ++ + L E ++ + + L G + Sbjct: 248 NNFSFVKGFFDIMIEG-DKRKYFEFVKKLFEEAVDPRTFINSIIEYIRVVLMIKSGIDDI 306 Query: 266 TNVDV----PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITD---LLLR 318 +++ + ANH + ++ IL + + E++ S + N + LLL Sbjct: 307 KLLEITENERDDLKTFANHYNDDEIERILDYILSVEERIRSAS--NTRTIFEMRMLLLLN 364 Query: 319 IEHYLQP 325 ++ ++P Sbjct: 365 TDNLIRP 371 >UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKL9_9BACT Length = 534 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 82/326 (25%), Positives = 130/326 (39%), Gaps = 46/326 (14%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 + P + L S + GR HA L G+G + L++ + C +P Sbjct: 9 KLRPQNFDELSGQEFVVTTLKNSIEMGRVAHAYLFTGPRGVGKTSAARILAKAVNCLEPV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G C C C + +GT D + G + G+D +RE+ E + KV + Sbjct: 69 GSNPCNKCENCTEITSGTSMDVVEI---DGASNRGIDEIRELREAVRFLPVKCKFKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NALLKTLEEPP F LAT +P+RL AT+ SRC+ + P + Sbjct: 126 DEVHMLTEHAFNALLKTLEEPPDYVMFILATTDPQRLPATIISRCQKYDFNKIPFEIMYD 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 L+ + +DAL +R S G +L+L L Q +A++ Sbjct: 186 SLAGAMDTEGIEYDKDALNLVVRNSDGCMRDSLSL-----------LDQIIAFTG----- 229 Query: 230 YSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAI 289 L+ + L + L+D L + + P + + LS + Sbjct: 230 ----GKLDEQSTSFLLGFSEKSLVDKLFA------LIIKEQPEEIPDAIEELSGKGVNFA 279 Query: 290 LGD---VCHIREQLMSV--TGINREL 310 + H R LM + N+EL Sbjct: 280 FATETLIGHTRNLLMQLITKKENKEL 305 >UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 Tax=Exiguobacterium RepID=B1YGC8_EXIS2 Length = 561 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 70/340 (20%), Positives = 127/340 (37%), Gaps = 34/340 (10%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + + R HA L G G +L +++ + C+Q ++ C C C+ + G Sbjct: 26 RTIQNALMEERMSHAYLFSGPRGTGKTSLAKIIAKAINCEQAPVNEPCNECPTCRAITEG 85 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 + PD + + + GVD +RE+ +K+ KV + + +L+ A NALLKT Sbjct: 86 SSPDVFEI---DAASNNGVDEIREIRDKVKYPPSEAAYKVYIIDEVHMLSTGAFNALLKT 142 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REVTMSQDA 186 LEEPPA F LAT EP ++ AT+ SRC+ + + + + + ++ A Sbjct: 143 LEEPPAHAIFILATTEPHKIPATIISRCQRFDVKRHEVDQLMERMQYILSDQTIGYTETA 202 Query: 187 LLAALRLSAGSPGAALALFQGD----------------NWQARETLCQALAYSVPSGDWY 230 L R + G AL+L + A+A ++ + Sbjct: 203 LRLIARAADGGMRDALSLLDQAVAFSNGDLTDDAVLEVTGAVEDEALLAVANALQAHQVD 262 Query: 231 SLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVDVP---GLVAELANHLS 282 LL L + + L D L V ++ + Sbjct: 263 QLLQTLEKMQRAGKDLKRFVEDLVFFYRDTLLLKTSPTAVDLLERARPTEAFKTFVETIE 322 Query: 283 PSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 I+ + ++Q M +T + +L+ ++I Sbjct: 323 TEACFHIIEQLHDCQQQ-MRLTN-HPRVLVEIAFIQIAEQ 360 >UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and tau n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C4B Length = 522 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 128/343 (37%), Gaps = 36/343 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L + R HA L G G +R + C+ Sbjct: 8 KYRPQKFSDMVGQEHITKTLKNQIKLNRIAHAYLFTGSRGTGKTTAAKIFARAINCKNSV 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K C C C+ + G + L + GVD +R++ E++ +G KV + Sbjct: 68 DGKPCEKCVVCKEIAEGAFVNIIEL---DAASHNGVDDIRQINEEVLYTPAVGVYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NA+LKTLEEPP F LAT +P+++ AT+ SRC+ Sbjct: 125 DEVHMLSPAAFNAMLKTLEEPPPYVVFILATTDPQKIPATVLSRCQRFDFRRISTSDICD 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 L + + ++A+ RL+ G AL++ + + + + + Sbjct: 185 CLLDYMQRENIEIEKEAVELIARLADGGMRDALSILE-------QCISFYIDEKITHSKV 237 Query: 230 YSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQV---------TNVDVPGLVAELANH 280 L+ A+++ ++ + MDA K ++ D+ L Sbjct: 238 LKLVGAVDNALLFEMMNAVIE--MDAAKAIAVCNEINQQGRNIKQFAKDLLMHTRNLLIA 295 Query: 281 LSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 + + IL +L EL I + I+++ Sbjct: 296 KTTEQKTEILDYTQEHVRELTQQAN---ELAIETIFRYIKNFT 335 >UniRef50_C5AFH6 DNA polymerase III, subunits gamma and tau n=1 Tax=Burkholderia glumae BGR1 RepID=C5AFH6_BURGB Length = 861 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 77/314 (24%), Positives = 120/314 (38%), Gaps = 25/314 (7%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L G+G L ++ L C+ Sbjct: 9 KWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAKALNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG CR C+ + G DY + + GVD + + E+ KV + Sbjct: 69 TSQPCGVCRACREIDEGRFVDYVEM---DAASNRGVDEMAALLERAVYAPVDARFKVYMI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NA+LKTLEEPP F LAT +P+++ T+ SRC L P + V Sbjct: 126 DEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPAGHIVM 185 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNW----QARETLCQALAYSVP 225 L R V AL R + GS AL+L + E + ++ Sbjct: 186 HLERILGEERVAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTEAAVSGMLGALD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELA-NHLSPS 284 LL A+ P L + D + + D+ GL+ +A +P+ Sbjct: 246 QTYMVRLLDAIASSDGPEILA-----IADEMALRSLSFSTALQDLAGLLHRIAWAQFAPA 300 Query: 285 RLQAILGDVCHIRE 298 + + +R Sbjct: 301 SVLDEWPEAADLRR 314 >UniRef50_B5EJD9 DNA polymerase III, subunits gamma and tau n=3 Tax=Acidithiobacillus RepID=B5EJD9_ACIF5 Length = 572 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 85/349 (24%), Positives = 125/349 (35%), Gaps = 37/349 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 RW P DF L + +GR HHA L G+G L L++ L C++ Sbjct: 10 RWRPQHFDDFVGQEAVVSALRHALDSGRIHHAFLFTGTRGVGKTTLARLLAKCLNCERGV 69 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + AG D + + VD R++ + + G K + Sbjct: 70 SSNPCGECSACRSIAAGNFVDLLEV---DAASRTRVDETRDLLDNVQYAPTAGRYKAYLI 126 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L Sbjct: 127 DEVHMLSAHSFNALLKTLEEPPEHVKFLLATTDPQKLPITVLSRCLQFNLRRLDVPQIQG 186 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +V AL R + GS AL+L R A+ Sbjct: 187 RLRQIMSLEQVPAEDAALQILSRAADGSLRDALSLLDQAIVHGGGAVRRDGVLAMLGRSG 246 Query: 226 SGDWYSLLAALNHEQAPARLHW-------------LATLLMDALKRHHGAAQV---TNVD 269 L+AAL A L L+++ L R A + + D Sbjct: 247 DDAVLGLIAALVDRDAAQVFAIVGDHLARGMDGPGLLDLVIEGLHRIALAQFLPADPDDD 306 Query: 270 VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 V L +SP LQ+ + R + + + LR Sbjct: 307 GAEAVVHLRGRISPLTLQSWYFLLLSARRDFALYP--DDRMALEMAFLR 353 >UniRef50_B0MPA0 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPA0_9FIRM Length = 743 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 12/247 (4%) Query: 13 KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT 72 L +AG HA L G G +++ + C P CG C C+ + AG Sbjct: 26 TLKNQIKAGTPAHAYLFTGSRGTGKTTCAKLMAKAVNCLSPVDGNPCGECESCKAIAAGC 85 Query: 73 HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTL 132 PD + + GVD VR + +++ + KV + + +L+ A NALLKT+ Sbjct: 86 -PDIIEM---DAASNNGVDDVRALRDEVMYAPTVCRYKVYIIDEVHMLSSQAFNALLKTI 141 Query: 133 EEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDAL 187 EEPP F LAT E ++ AT+ SRC+ + + + L V +++DA Sbjct: 142 EEPPPHVIFILATTEIHKVPATIASRCQQFRFSRIDVEESTKRLCEIAKKENVNITEDAA 201 Query: 188 LAALRLSAGSPGAALALFQ---GDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPAR 244 RLS G A++L + E + A + ++L ++ + AP Sbjct: 202 RLISRLSDGGMRDAVSLLDQCISVSADIDEETVRTTAGIAGTEHLFTLAQCIHEQNAPEA 261 Query: 245 LHWLATL 251 L L L Sbjct: 262 LKILDEL 268 >UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Tax=Bacteria RepID=B4RU47_ALTMD Length = 930 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 120/312 (38%), Gaps = 31/312 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + R HHA L G+G + S+ L C++ Q Sbjct: 9 KWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSKSLNCEEGQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G CG C C+ ++ G + D + + V+ RE+ + + G KV + Sbjct: 69 GANPCGQCNTCKEIEQGNYVDLLEI---DAASRTKVEDTRELLDNVQYKPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L + V Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKAMSREQIVG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 L ++ AL R + GS AL+L Q ++ + + Sbjct: 186 QLTHILQQEQLAFEAPALALLARAAQGSMRDALSLTDQAIAQGGNQVMASVVTDMLGLMD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 ++ A+ ++ L L++ + D + +ELA+ L Sbjct: 246 KNQLLKVIHAVVNKSPAEVLQ-----LVNDIAEQA-------PDYDNVHSELASLLHQIA 293 Query: 286 LQAILGDVCHIR 297 L + + C + Sbjct: 294 LTQWVPEACKLE 305 >UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Bacilli RepID=Q1WSU3_LACS1 Length = 579 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 70/335 (20%), Positives = 123/335 (36%), Gaps = 39/335 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P D + L + + HA L G G + ++ + C+ + Sbjct: 10 WRPQRFMDLVGQEMVTKTLKNAIITHQTSHAYLFTGPRGTGKTSAAKIFAKAINCRFSKE 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G D + + GV+ +R++ +K+ KV + Sbjct: 70 GEPCNECETCKAITEGRLNDVIEI---DAASNNGVEEIRDIRDKVKYAPTEADYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPPA F LAT EP ++ AT+ SR + + + Sbjct: 127 EVHMLSTGAFNALLKTLEEPPANVVFILATTEPHKIPATIISRTQRFDFKRITAESILQR 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQG--DNWQARETLCQAL-------- 220 + + V AL + + G AL+L TL AL Sbjct: 187 MIYILDQKNVDYDDKALKVIAKAAEGGMRDALSLLDQVISFGDNNVTLDNALLVTGSVTQ 246 Query: 221 ------AYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 V S D + L + + A + L D L V++ + Sbjct: 247 ESLFNYLKFVLSKDTTNALKEIQQIVEQGKDANRLIEDLINYCRDLLLYQQAPEMVSDGE 306 Query: 270 ---VPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 + EL+ ++ ++L I+ ++ +E + Sbjct: 307 LGLLDDKFKELSQQINVTQLYQIIDELNKQQENMR 341 >UniRef50_P06710 DNA polymerase III subunit gamma n=112 Tax=Enterobacteriaceae RepID=DPO3X_ECOLI Length = 643 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 87/369 (23%), Positives = 141/369 (38%), Gaps = 43/369 (11%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L GR HHA L G+G ++ L++ L C+ Sbjct: 9 KWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ R++ + + G KV + Sbjct: 69 TATPCGVCDNCREIEQGRFVDLIEI---DAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 L + AL R + GS AL+L + Q A+ ++ Sbjct: 186 QLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLD 245 Query: 226 SGDWYSLLA-----------ALNHEQAPARLHW------LATLLMDALKRHHGAAQVTNV 268 SL+ AL +E A + W + LL A + N Sbjct: 246 DDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGN- 304 Query: 269 DVPGL---VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 D+ + + ELA + P+ +Q + R++L +R + + LLR P Sbjct: 305 DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAP--DRRMGVEMTLLR-ALAFHP 361 Query: 326 GVVLPVPHL 334 + LP P + Sbjct: 362 RMPLPEPEV 370 >UniRef50_A0YGP8 DNA polymerase III subunit delta n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGP8_9GAMM Length = 334 Score = 280 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 97/315 (30%), Positives = 148/315 (46%), Gaps = 3/315 (0%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW + +++ + A R HA L+ PG G + +L YL+CQ P +CG CR Sbjct: 13 PWQNEQWHRIIDLHGAERLPHAFLLAGSPGTGKHRFLLSLCHYLMCQAPLAGAACGKCRQ 72 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 CQL+ G HPD LAPE+ + VD VR V E L+ ++ GG K+ +T A + A Sbjct: 73 CQLLATGDHPDLKWLAPEEKSRQIKVDQVRAVVEFLSHTSQQGGYKIGVITPAEAMNINA 132 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 ANALLK+LEEP +T FL + P +LL T+RSRC+ PPE+ ++ WLS V Q Sbjct: 133 ANALLKSLEEPSDKTLLFLVSDSPGQLLPTIRSRCQQVSFPVPPEEESLQWLS-TVVPGQ 191 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSV-PSGDWYSLLAALNHEQAPA 243 LR ++G P AL L D + R+ L + S + Sbjct: 192 AETNTLLREASGQPLTALDLLSNDGLERRKQLDGDYRVVLGGSASPLVIAEKWLEYDLEE 251 Query: 244 RLHWLATLLMDALKRHHGAAQVTNV-DVPGLVAELANHLSPSRLQAILGDVCHIREQLMS 302 L L LL +K + + + +L+ ++ + ++L + IR + Sbjct: 252 VLVRLIVLLTRLIKIKIVPSPLAAATNEEDSWYKLSQNVDIRDVYSLLDSIHSIRNAINR 311 Query: 303 VTGINRELLITDLLL 317 NR+L++ +L Sbjct: 312 GATPNRQLVLEQILF 326 >UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Betaproteobacteria RepID=Q3SLE5_THIDA Length = 581 Score = 280 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 83/314 (26%), Positives = 118/314 (37%), Gaps = 24/314 (7%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + GR HHA L+ G+G L L++ L C+ Sbjct: 18 KWRPRAFADLRGQEHVVQALSNALTQGRLHHAYLLTGTRGVGKTTLARILAKCLNCESGV 77 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + AG D L + GVD +REV + +G KV + Sbjct: 78 SATPCGTCSACTQIDAGRFVDLLEL---DAASNTGVDNMREVLDNAQYAPTVGRYKVYII 134 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A N++LKTLEEPPA F LAT +P+++ T+ SRC L P Sbjct: 135 DEVHMLSKPAFNSMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKPMTPALVAG 194 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L V AL R +AGS AL+L + +A+ +V Sbjct: 195 HLGDVLAQERVDAEPAALNLLARAAAGSMRDALSLTDQAIAYGGGRIEAAAVEAMLGTVR 254 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 + LL AL A + L A T D+ L+ +LA L Sbjct: 255 RDYLFDLLDALAAGDGDALMTQAR-----LLAERGIAFDATLQDLGNLLTQLALVLHAPG 309 Query: 286 LQAILGDVCHIREQ 299 D R Sbjct: 310 AVEDGADAERTRAA 323 >UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1Z8_ERYRH Length = 600 Score = 279 bits (715), Expect = 7e-74, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 31/309 (10%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L S + HA L G G ++ +R + C+ P CG C C + GTH Sbjct: 28 LKNSITKNKISHAYLFCGPRGTGKTSIAKLFARAVNCENPDQVI-CGTCDNCLAVADGTH 86 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + + GVD +R + EK+ LG KV + + +L+ A NALLKTLE Sbjct: 87 PDLIEI---DAASNNGVDEIRGLIEKVKYTPILGKYKVYIIDEVHMLSQGAFNALLKTLE 143 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALL 188 EPP+ F LAT E ++L T+ SRC+ + E L + V Q Sbjct: 144 EPPSHVVFILATTEIHKVLPTIISRCQRYDFNRIGEVDIAKRLDYVLNNENVEAEQGVSK 203 Query: 189 AALRLSAGSPGAALALFQGDNWQARETLCQALAYS----VPSGDWYSLLAALNHEQAPAR 244 LS G AL + + A + + Y + D +L ++ +Q A Sbjct: 204 LIASLSGGGLRNALTILEQAIVLADDQITVNQIYDTNGIITDQDKINLFDSIREQQMEAL 263 Query: 245 LHWLA----------TLLMDA--------LKRHHGAAQVTNVDVPGLVAELANHLSPSRL 286 ++ +A L+MD + H + + N + + LA L Sbjct: 264 VNQIAMMNEKSVNIDRLMMDLVSGLKDSIIYSHTKSDALVNENSLMFIHYLAETLQVHER 323 Query: 287 QAILGDVCH 295 ++ + Sbjct: 324 LKVIEKLLS 332 >UniRef50_Q67JB2 DNA polymerase III delta' subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67JB2_SYMTH Length = 332 Score = 279 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 85/308 (27%), Positives = 121/308 (39%), Gaps = 11/308 (3%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 R + L + GR HA L G+G + L+R L C +P+ ++CG CR C Sbjct: 9 QRMAVDLLRRAVAGGRVAHAYLFAGPAGVGKRLVALELARSLNCLEPRAGEACGACRSCL 68 Query: 67 LMQAG--THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 + A HPD + PE + + +R+V ++ G KVV + A + + Sbjct: 69 KLSAEPPVHPDVTVVEPEG--RMIRTEQMRQVQNEVYARPTEGRYKVVIIDGAERMNAES 126 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 N LLK LEEPP F L T +L T+ SRC++ + +P P + L + + Sbjct: 127 GNRLLKVLEEPPPYACFVLLTTNAAGVLPTIVSRCQIVHFSPLPAEAIAAVLQEKAGIGP 186 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAA-----LNHE 239 LS GS GAALA+ R +L + D LL + Sbjct: 187 GEARLFASLSGGSVGAALAMAANPEVGRRRDEALSLLLRLGEMDDADLLEQAAAWEKEKD 246 Query: 240 QAPARLHWLATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIR 297 RL A L DAL R V N D V LA L A L + R Sbjct: 247 HLEERLEMAAFWLRDALLVAREAPERLVVNADRLPEVRTLAGRYGGEGLVAALESLSRAR 306 Query: 298 EQLMSVTG 305 + L+ Sbjct: 307 DALLRNGN 314 >UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WR18_9SYNE Length = 745 Score = 279 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 80/356 (22%), Positives = 134/356 (37%), Gaps = 45/356 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P + L + + R A L G G + L++ L C Sbjct: 8 KYRPQTFSQLVGQDAIAQTLTHALEQKRIAPAYLFCGPRGTGKTSSARILAKSLNCLSSE 67 Query: 54 -QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 + CG C CQ + G D + + GVD +RE+ E+ K+ Sbjct: 68 VPTAQPCGQCDVCQAVIQGIALDVVEI---DAASNTGVDNIRELIERSQFAPVQCRYKLY 124 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ AA NALLKTLEEPP+ F LAT +P+R+L T+ SRC+ P Sbjct: 125 VLDEVHMLSTAAFNALLKTLEEPPSRVVFVLATTDPQRVLPTIISRCQRFDFRRIPLPSM 184 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQA---LAYSV 224 + L + + A+ ++S G A +L + QA + + L +V Sbjct: 185 IKHLSYISAEEAIQIEPSAIQLVAQISQGGLRDAESLLDQLSLQANKITVETVWDLVGAV 244 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQ--- 264 P D +L+ A+ + + A L L D L + Sbjct: 245 PERDLLNLVRAIAADDSTALLERVRHLMDKGREPLIVLQSLVGFYRDLLIAKRAPKRVDL 304 Query: 265 --VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM--SVTGINRELLITDLL 316 +T+ ++ A LS + L A + Q+ + + E+ +T LL Sbjct: 305 VAITSPTWAEMI-PFAQKLSAAALLASQQKLQSAEVQIKNTTQPRLWLEITLTGLL 359 >UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Tax=Thermosipho africanus TCF52B RepID=B7IDS2_THEAB Length = 480 Score = 279 bits (714), Expect = 9e-74, Method: Composition-based stats. Identities = 79/332 (23%), Positives = 128/332 (38%), Gaps = 52/332 (15%) Query: 2 RWYPWL------RPDFEKL-VASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + L + S + G HA + G G + L++ L C+ Sbjct: 7 KYRPKLFSEVVGQNHVKTLFLNSLKNGEISHAYIFAGPRGTGKTTVARILAKSLNCENKN 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G + C C CQ + G+ D + + G+D +R++ E + HA G KV + Sbjct: 67 GVEPCNKCNTCQSIDNGSFMDVLEI---DAASNRGIDEIRKIRETVGYHAAQGNYKVYII 123 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP+ F LAT PE++ T+ SRC++ + + Sbjct: 124 DEVHMLTKEAFNALLKTLEEPPSNVVFILATTNPEKIPQTIISRCQVIDFKNLTIEDIIK 183 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG---------DNWQARETL---- 216 L + +SQ+AL + + G AL + + RETL Sbjct: 184 RLEFVCKKENINISQEALNEIAKRANGGMRDALTILEQVSKSSSKDITIEDVRETLGLVP 243 Query: 217 ---CQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 + S+ GD + + L L + LK G ++ Sbjct: 244 IEVINEMIDSIKIGDIKKTTEIIEKVYFSGKDPEVFLMQLLEEM--ILKIESGDYELIEF 301 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 P L IL D+ + E+L Sbjct: 302 LKP--------------LSEILKDIKYSEEKL 319 >UniRef50_C1CYE9 Putative DNA polymerase III, subunits gamma and tau n=1 Tax=Deinococcus deserti VCD115 RepID=C1CYE9_DEIDV Length = 762 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 84/282 (29%), Positives = 122/282 (43%), Gaps = 16/282 (5%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L A+ + GR HA L G+G ++ C P K CG C C ++AG+H Sbjct: 26 LRAALEQGRVGHAYLFSGPRGVGKTTTARLIAMTANCSGPL-PKPCGECESCLSVRAGSH 84 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + + VD VR++ EK++ A GG K+ + +A +++ AA NALLKTLE Sbjct: 85 PDVLEI---DAASNNSVDDVRDLREKVSLAAMRGGKKIYILDEAHMMSRAAFNALLKTLE 141 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALL 188 EPP+ F LAT EPE+++ T+ SRC+ + + L V DAL Sbjct: 142 EPPSHVIFILATTEPEKIIPTILSRCQHYRFRRLTAEEIAGKLSGLAAKEGVRAEPDALQ 201 Query: 189 AALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPAR 244 RL+ G+ +L + R + +AL P + AL A + Sbjct: 202 LIGRLADGAMRDGESLLERMLAAGTAVTRVAVEEALGLP-PGERVRGIAGALVLGDAGSA 260 Query: 245 LHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRL 286 L A L D + + L AEL LS RL Sbjct: 261 LQGAAQLYRDGFAARTVVEGLVSALGTALHAEL--GLSGERL 300 >UniRef50_A5EY35 DNA polymerase III, subunits gamma and tau n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EY35_DICNV Length = 665 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 76/351 (21%), Positives = 127/351 (36%), Gaps = 38/351 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ-QP 53 +W P + + L + R HHA L G+G +L ++ L C Sbjct: 8 KWRPKTFRELVGQQHITQALSYALDHDRLHHAYLFTGTRGVGKTSLARIYAKSLNCLING 67 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + CG C C + G PD + + G+D +E+ + L G KV Sbjct: 68 TSAQPCGQCEHCLEIDQGRFPDLIEV---DAASRRGIDETKELLDNLPYAPVKGRYKVYL 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + + T + NALLKTLEEPP F LAT + +++ T+ SRC +L + Sbjct: 125 IDEVHMFTRESFNALLKTLEEPPPHVKFILATTDIQKVPTTVLSRCLQFHLKNINPEQLR 184 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 L+ + +AL+ + + GS L+ + L +V Sbjct: 185 QHLAHILQVERIDYEAEALVLLAQAARGSMRDGLSFLDQAIAYGQGVVKTDDVAYLLGAV 244 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATL------LMDALK------RHHGAAQVTNVDVPG 272 P+ Y LL + A A L L MD L+ + AQ+ P Sbjct: 245 PTAQIYRLLTKIAESDARAVRAILTELDAFSPDYMDVLRHVFQGLQQITVAQLQAQQNPN 304 Query: 273 LVAE----LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + + LA L +Q + + + + + + LR+ Sbjct: 305 EIDQTLVRLAQQLPVELVQLWYQIISDAWQSMPYQP--DMRVALEMTFLRM 353 >UniRef50_Q21K67 DNA polymerase III, delta prime subunit n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21K67_SACD2 Length = 331 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 96/328 (29%), Positives = 153/328 (46%), Gaps = 7/328 (2%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M YPWL +++ R HALLI G+G D L A+ + LLC P +CG Sbjct: 6 MPPYPWLESVWDEFAEKLAQKRVPHALLITGQEGLGSDTLAKAMGQLLLCLSPLEGIACG 65 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 CR CQL+QAG+HPD +APE+ + +D +R VTE +++ A+ GG KVV VT + Sbjct: 66 KCRACQLLQAGSHPDLLWIAPEEAGKQIKIDQIRRVTEFVSKTAQQGGKKVVVVTPTEAM 125 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 + ++NALLK+LEEP +T L T + ++L T+RSRC L P A +WL Sbjct: 126 NNNSSNALLKSLEEPAGDTVLILITFQESQILPTIRSRCARIVLTTPSYDVAQSWLQENG 185 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAY-SVPSGDWYSLLAALNHE 239 A + L + G+P + + + + R+ L + + S +A L Sbjct: 186 H---QAAIPLLGEAGGAPLKGVEWLKTEYVEQRQKAMACLEQLASQTRGPVSAVAQLGGI 242 Query: 240 QAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELAN---HLSPSRLQAILGDVCHI 296 AP + + L+ + + V + LA +S L +C Sbjct: 243 SAPVLVELMLNLVDSLITTKLAPSSVRAEQRQESIQPLAQYMARVSGQMLFRFRERLCEQ 302 Query: 297 REQLMSVTGINRELLITDLLLRIEHYLQ 324 + +L+ +N+ L I +LL+ + + Sbjct: 303 KLKLIRNANLNQTLFIEELLMDWQLVAK 330 >UniRef50_Q1QX48 DNA polymerase III, delta prime subunit n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QX48_CHRSD Length = 323 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 95/326 (29%), Positives = 150/326 (46%), Gaps = 6/326 (1%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M PW R + +LV A R HALLI G+G L AL LC P G +CG Sbjct: 1 MTPLPWQRDLWTRLVRQQDAQRLPHALLISGPHGVGKHDLADALIARTLCHAP-GETACG 59 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C ++ +G HPD ++P + + + +D +R+V +++ A+ GG +V+ + A + Sbjct: 60 ECHACHMLASGYHPDLLDISPAEKRRQIRIDPIRQVNAFVSQTAQQGGHRVIRLHPAEAM 119 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 AA+NALLK+LEEP T F L P R+L T+RSRC+ L P + A+ WLS + Sbjct: 120 NVAASNALLKSLEEPGERTLFVLLADIPSRMLPTIRSRCQHWSLGVPDAESALPWLSERL 179 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ 240 + LR++ G P AL L +G R+ L + V + + A L+ + Sbjct: 180 E-DAEQARFWLRVAGGLPQFALELVEG--RALRQELRELFDALVRGAEPVAEAARLDPQS 236 Query: 241 APARLHWLATLLMDALKR--HHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 L + L D ++ A V N D+ L + + +L R Sbjct: 237 LDRVLWYGIVWLEDLIRLGVAGDAEHVRNPDLLPLYRQAVKNARVRDWFRLLDYAREQRR 296 Query: 299 QLMSVTGINRELLITDLLLRIEHYLQ 324 + + N +L++ L+R L+ Sbjct: 297 LIAAGGNPNAQLVLEAWLVRWASLLR 322 >UniRef50_C4Z189 DNA polymerase n=20 Tax=Bacteria RepID=C4Z189_EUBE2 Length = 331 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 77/319 (24%), Positives = 134/319 (42%), Gaps = 13/319 (4%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 E L ++ G+ HA +I G G + ++ L C+ G + CG C C Sbjct: 15 EHLQSAISMGKVSHAYVISGGLGSGKKLIASTFAQTLQCEAG-GVEPCGVCHSCVQAAGR 73 Query: 72 THPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLK 130 PD + EK + +GVD +R+ + + K+ + +A LT AA NA+LK Sbjct: 74 NQPDIIWVGHEKPGS-IGVDDIRDQLVSDMQIKPYSSPYKIYIIDEADKLTVAAQNAMLK 132 Query: 131 TLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT-MSQDALLA 189 T+EEPPA L P+ L T+ SRC + L P + + +L +S Sbjct: 133 TIEEPPAYGIVILLANNPDVFLQTILSRCVVLDLKPLKDDIVIKYLKDHYDNISDYECKF 192 Query: 190 ALRLSAGSPGAALALFQGDNW-QARETLCQAL--AYSVPSGDWYSLLAALN--HEQAPAR 244 A R +AG G A+ + + + + R + + A + S D + + + Sbjct: 193 AARFAAGRIGRAMTMVESTEFAELRRDVMDVIKNAKDMDSTDIMTSVKRVTNYKLTIDDY 252 Query: 245 LHWLATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMS 302 L + D L K + + D L+ A +S LQ I+ + ++ +L + Sbjct: 253 LDLMLMWYRDVLMFKSTNDTNLLIFNDQMTLIKSQAQTMSYEGLQDIINSIDRVKVRLQA 312 Query: 303 VTGINRELLITDLLLRIEH 321 +N +L+I L++ I+ Sbjct: 313 --NVNFDLVIELLIMAIKE 329 >UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=B0VRL4_ACIBS Length = 682 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 126/353 (35%), Gaps = 40/353 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L ++ ++GR HHA L G+G + L++ L C+ Sbjct: 8 KYRPRNFNELVGQNHVSRALSSALESGRLHHAYLFTGTRGVGKTTIARILAKCLNCETGV 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + G D + + V+ RE+ + + G KV + Sbjct: 68 TSTPCEVCATCKAVNEGRFIDLIEI---DAASRTKVEDTRELLDNVPYAPTQGRFKVYLI 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F AT +P++L T+ SRC L P Sbjct: 125 DEVHMLSTHSFNALLKTLEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVDEITK 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ QDA+ + GS AL+L + + + Sbjct: 185 HLGAILEKEQIAADQDAIWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEMLGLID 244 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNV----------------- 268 Y L+ A++ Q L AL Q+ + Sbjct: 245 RTIIYDLILAVHQNQREKVSQLLLQFRYQALDVSLVLDQLISTLHELALLQYLPELGLKY 304 Query: 269 --DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 ++ + +L+ +S LQ C R L + +E +LR+ Sbjct: 305 SEEINAKILQLSKLISAQDLQLYYQIACKGRSDLQL--AVTQEQGFEMCVLRL 355 >UniRef50_D0ZED4 DNA polymerase III, subunits gamma and tau n=2 Tax=Enterobacteriaceae RepID=D0ZED4_EDWTE Length = 689 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 137/368 (37%), Gaps = 43/368 (11%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L GR HHA L G+G ++ L++ L C+ Sbjct: 46 KWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI 105 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ R++ + + G KV + Sbjct: 106 TATPCGVCDNCREIEQGRFVDLLEI---DAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 162 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 163 DEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLRALDHEQIRA 222 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +T AL R + GS AL+L Q + ++ Sbjct: 223 QLEKIAHAEALTAEPRALQLLARAAEGSMRDALSLTDQAIAMGQGQITADAVSQMLGTLD 282 Query: 226 SGDWYSLLAALNHEQ-----------APARLHWLATLLMDALKRHHGAAQV--------- 265 +L+ AL A + W LL++ L H A + Sbjct: 283 DEQPLALIEALTAADGTLVMARVEQAAGRGVDW-ENLLVEMLALLHRVAMLQLLPSALDS 341 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 V + ELA L P+ LQ + + R++L +R + + LLR P Sbjct: 342 QFAAVEPRLRELARMLPPADLQLFYQILLNGRKEL--AFAPDRRMGVEMTLLR-ALAFHP 398 Query: 326 GVVLPVPH 333 V+ P Sbjct: 399 KAVIAEPS 406 >UniRef50_Q47XQ9 DNA polymerase III, gamma/tau subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47XQ9_COLP3 Length = 715 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 73/333 (21%), Positives = 125/333 (37%), Gaps = 37/333 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPKNFQQLMGQEHVVNVLANALSQKRLHHAYLFTGTRGVGKTTIARIFAKSLNCELGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TDKPCGKCDACIDIDQGRFVDLLEI---DAASKTKVDDTREILDNVQYAPSRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFILATTDPQKLPITVLSRCLQFHLKALTVKQIED 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L+ +V+ Q L + + GS +L+L Q + + Q + + Sbjct: 186 KLAEILSHEQVSHEQGCLTLLAKAARGSMRDSLSLTDQAIAQGQGHINLTNIQQMLGGID 245 Query: 226 SGDWYSLLAALNHEQAPARLHW----------LATLLMDALKRHHGAAQVTNVDVP---- 271 Y L+ L + + A + + L + ++ H A + V+ P Sbjct: 246 QNWVYQLVITLLKQDSQALMTLSQEIASYAPSYSRLFAELIQLFHQIALMQIVEQPFDLP 305 Query: 272 ----GLVAELANHLSPSRLQAILGDVCHIREQL 300 L+ + + +S +Q + R+ L Sbjct: 306 ADLLALLKKFSQAMSAEDVQLYYQISLNGRKDL 338 >UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJR0_9GAMM Length = 587 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 86/354 (24%), Positives = 129/354 (36%), Gaps = 41/354 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + R HHA L G+G + L+R L C+ Sbjct: 9 KWRPGRFEDLVGQPHVVRALANALSGDRLHHAYLFAGTRGVGKTTIARILARCLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG CR C + G H D + + VD RE+ + ++ G KV + Sbjct: 69 TATPCGECRSCVEIAEGRHLDLIEV---DAASRTRVDDTRELLDNVSYAPTAGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L++ + NALLKTLEEPP F LAT +P++L T+ SRC L P P Sbjct: 126 DEVHMLSEKSFNALLKTLEEPPDHVKFLLATTDPQKLPVTVLSRCLQFNLKPMPPALIAE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQA----LAYSVP 225 L + + ALL + GS AL+L + L ++ + +P Sbjct: 186 HLTRILEAEGLQAEPGALLRLGEAAEGSMRDALSLTDQAIAYGGDRLTESDACDMLGLLP 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL---------LMD---ALKRHHGAAQVTNVD---- 269 LL A P + L L L+D AL Q+ + Sbjct: 246 RTRLTGLLDAAFAGDGPGLMQGLQELKGLGPDWSRLLDELAALVHRVAVEQLVRGEGGAE 305 Query: 270 ----VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 E A + LQ + H L + ++ + LLR+ Sbjct: 306 DDDAAERWARETAARIDAETLQLTYQILIHGARDL--PWAPDAQMGVEMTLLRL 357 >UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=15 Tax=Betaproteobacteria RepID=Q1LLG8_RALME Length = 795 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 83/331 (25%), Positives = 133/331 (40%), Gaps = 30/331 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + + R HHA L G+G L L++ L C P Sbjct: 9 KWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAKALNCTGPD 68 Query: 55 GH-----KSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 G+ + CG C+ C + +G DY + + GVD + ++ +K G Sbjct: 69 GNGGITAQPCGQCKACTEIDSGRFVDYIEM---DAASNRGVDEMAQLLDKAIYAPTAGRF 125 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 KV + + +LT+ A NA+LKTLEEPP F LAT +P+++ T+ SRC L P Sbjct: 126 KVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP 185 Query: 170 QYAVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQAL 220 + V+ L ++ AL + + GS AL+L Q E + + Sbjct: 186 GHIVSHLDHILAQEGISHDGSALRLLAQAAHGSMRDALSLTDQAIAYSAGQVSEEAVRGM 245 Query: 221 AYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANH 280 ++ LL AL E L +A + D GA Q D+ L+ ++A Sbjct: 246 LGAIDQSYLVQLLDALAAEDGATMLG-IADSMADRSLSFAGALQ----DLGSLLHKVALA 300 Query: 281 LS-PSRLQAILGDVCHIREQLMSVTGINREL 310 + P+ +Q + +R +L Sbjct: 301 QAVPASVQDEWPEAEDVRRLARQFDAQETQL 331 >UniRef50_A6DD60 DNA polymerase III subunits gamma and tau n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DD60_9PROT Length = 487 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 76/351 (21%), Positives = 132/351 (37%), Gaps = 46/351 (13%) Query: 1 MRWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P + L+ S + R +A L L G G S+ L C++ Sbjct: 5 LKYRPKKFEEIIGQDAIIQTLINSLNSNRIANAYLFSGLRGSGKTTTARIFSKALQCEKG 64 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 C C C+L H D + + ++ +RE+ E + K+ Sbjct: 65 ISSSPCEECESCKLANENRHIDIIEM---DAASNRKIEDIRELIEHTKYKPSISRFKIFI 121 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT+ A NALLKTLEEPP F +AT +P +L AT+ SR + PE+ Sbjct: 122 IDEVHMLTNEAFNALLKTLEEPPEYVKFIMATTDPLKLPATILSRVQHFRFNKIPEKEIE 181 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS---VP 225 ++L V +AL ++ + GS +L L L QA+AYS + Sbjct: 182 SFLQKVLIKENVKFEDEALRLIVKSAKGSVRDSLTL-----------LDQAIAYSNYNIT 230 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPG---------LVAE 276 +L +N P + + L+ D K+ D + E Sbjct: 231 LDKVVEMLGVIN----PEIISKIFKLIFDGDKKEIIEIIKQIKDYDIESIIDEIILYLKE 286 Query: 277 --LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 +L +Q + +E + N E +++ + R+ +P Sbjct: 287 AMFYGNLPLITMQRFFNIISDTKELIKYQ-NDN-EFILSLMFFRMIEATKP 335 >UniRef50_A5FRM9 DNA polymerase III, subunits gamma and tau n=5 Tax=Dehalococcoides RepID=A5FRM9_DEHSB Length = 570 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 76/347 (21%), Positives = 130/347 (37%), Gaps = 39/347 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + +GR A L G G + L++ + C Q Sbjct: 12 KWRPQTLADLVGQEHVAHTLKNALSSGRIAQAYLFCGPRGTGKTSTGRILAKAVNCTTNQ 71 Query: 55 G-HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 G + C C C + G+ D + + GVD +RE+ EK+ L KV Sbjct: 72 GKGEPCNTCPMCLSITEGSSMDIIEI---DAASNTGVDDIRELKEKVQYSPSLANYKVYI 128 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAP-----PP 168 + + +L+++A+NALLKTLEEPP F LAT E ++L T+ SRC+ Sbjct: 129 IDEVHMLSNSASNALLKTLEEPPPRVIFILATTEIHKVLPTIMSRCQRFDFHRVSLVDMT 188 Query: 169 EQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQ--GDNWQARETLCQALAYSVPS 226 + L+ + + +AL R + GS L Q + A +L Q A S Sbjct: 189 RKLGKISLAEGINVEPEALKLIARSAGGSFRDGENLLQQIATTYGAEISLSQVQAALGIS 248 Query: 227 GD--WYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTN----------------- 267 GD +L + + L L +L D L ++ + Sbjct: 249 GDERIKALAENILKKDIKNGLKTLNAVLADGLDLKQFRRELLDYLRQIMLVNSGSESSLE 308 Query: 268 --VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLI 312 D + +++ + + + + + + ++ EL + Sbjct: 309 LTADEKKALQKVSGITNLENITKAIKAFSQLDFSSDTASSLSFELAL 355 >UniRef50_C8PKZ6 DNA polymerase III subunit tau n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PKZ6_9PROT Length = 763 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 115/300 (38%), Gaps = 25/300 (8%) Query: 1 MRWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P + L + +GR HA L L G G + ++ LLC + Sbjct: 6 LKYRPKSFEQLIGQDAVAKSLAHALDSGRLSHAYLFSGLRGSGKTSTARIFAKALLCDKG 65 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 K C C C + G H D + + +D +RE+ E+ H K+ Sbjct: 66 PTGKPCEVCDNCVMANEGRHIDIIEM---DAASHRKIDDIRELIEQTKYHPASARFKIFI 122 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT A+NALLKTLEEPPA F LAT +P +L T+ SR + P + V Sbjct: 123 IDEVHMLTKEASNALLKTLEEPPAYVKFILATTDPLKLPVTVLSRTQHFRFKPIAKSAVV 182 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGD 228 L+ + AL R +GS L L +RE + Q Sbjct: 183 AHLAQILKTENIAYEDGALEILARSGSGSLRDTLTLLDQAIIFSREGITQ--------RA 234 Query: 229 WYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQA 288 +L L+ + L + D +V N + ++ E+ +L L+ Sbjct: 235 IADMLGLLDPAKIGEILDIVLR--QDRAGAIEIIKEVENYNAETIIDEMIANLKDKFLRR 292 >UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C4ZNJ5_THASP Length = 716 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 82/332 (24%), Positives = 126/332 (37%), Gaps = 36/332 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L G+G + L++ L C+ Sbjct: 9 KWRPKSFGTLVGQEHVVRALTHALATGRLHHAWLFTGTRGVGKTTISRILAKALNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + A PDY + + GV+ + + +K G KV + Sbjct: 69 TAEPCGICDACRAIDADRFPDYVEM---DAASNRGVEEMAALLDKAVYAPVQGRFKVYMI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NA+LKTLEEPP F LAT +P+++ T+ SRC L P+ + V Sbjct: 126 DEVHMLTGHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPQGHIVD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + EV AL + ++GS AL+L + E + +V Sbjct: 186 HLTRILQAEEVAFEPGALRHLAKAASGSMRDALSLLDQAIAHGAGRVEEEQVSHMLGTVG 245 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNV 268 Y++L AL PA L LATL+ + A + + Sbjct: 246 DDHLYAVLDALAAGDVPALLAVADGMEARSLSFDAALQALATLVHRVALAQYAPAAIADE 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + LQ H R++L Sbjct: 306 LERARILGYVERFDAEFLQLAYQVAVHGRDEL 337 >UniRef50_A6TJF9 DNA polymerase III, delta prime subunit n=2 Tax=Alkaliphilus RepID=A6TJF9_ALKMQ Length = 329 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 127/318 (39%), Gaps = 13/318 (4%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L S + H + + + G+G + + L++ L C G + C C C+ + H Sbjct: 16 LKQSIKQNTVGHGYIFEGIEGLGKHLVAFELAKALCC-TGTGDQPCNQCNSCKKLSHQNH 74 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + E ++ ++ +R++ + + KV + A +T A NALLKTLE Sbjct: 75 PDVIWITGEG---SIKINTIRDLQKDTQQKPYESRKKVYIIEKAEKMTVQAQNALLKTLE 131 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRL 193 EPP+ L T LL T+ SRC++ P P +L E + + L Sbjct: 132 EPPSYVTLILLTANSHSLLPTITSRCQIIKFQPVPLDVIQAFLMLEKNVDLEKAKLMATL 191 Query: 194 SAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALN-----HEQAPARLHWL 248 S G G AL L + ++Q + ++ + D + L + E L Sbjct: 192 SNGVVGKALKLLEDPSFQNQREGLIQISKDLFKKDKVAALQKFSFFEDHKESIEEILELY 251 Query: 249 ATLLMDALKRHHGAAQVT--NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGI 306 D L +V N+D + +N + ++ I+ + + +E + + Sbjct: 252 LVWYRDLLVYRDTQNKVLMFNIDQVEEIISQSNRIDLKKISNIISIIENTKENVRR--NV 309 Query: 307 NRELLITDLLLRIEHYLQ 324 +L I +LL I+ L Sbjct: 310 QFQLNIEVMLLNIQEVLS 327 >UniRef50_A6DLE8 DNA polymerase III, gamma and tau subunits n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLE8_9BACT Length = 890 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 76/359 (21%), Positives = 129/359 (35%), Gaps = 46/359 (12%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + + R HA + G+G ++ L C+ P+ Sbjct: 9 KWRPQTFDDLAGQDHITSTLTNAIRNQRVGHAYIFVGTRGIGKTTSARIFAKALNCETPR 68 Query: 55 GH-KSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 CG C C + G+ D + G + VD +R++ E K+ Sbjct: 69 ADLNPCGQCTNCTEITQGSSIDVIEI---DGASNNSVDDIRQIREGAQYTPARCPYKIFI 125 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L++AA NALLKTLEEPP F AT E R+L T+ SRC+ L P P Sbjct: 126 IDEVHMLSNAAWNALLKTLEEPPPHIKFLFATTEVHRVLPTILSRCQRLELKPIPRNVIA 185 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG--------DNWQARETL---- 216 L V + A+ A R + G L++ + ++ + Sbjct: 186 GRLKHICETENVAIEDSAINAISRTANGGMRDGLSILDQMISFCSGNEIISEQDVIDVFG 245 Query: 217 ------CQALAYSVPSGDWYSLLAALN-----HEQAPARLHWLATLLMDALKRHHGAAQV 265 + +A ++ +L+ A++ L L D + Q Sbjct: 246 MSSSNELKLIASAILQNQAPALIEAIDTLAKAARNMEQLYSELFQLFRDVMILLESPQQA 305 Query: 266 TNV-----DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 ++ + ELA + LQ +L ++ +N+ + LLRI Sbjct: 306 RSILDLEEVEIQQLYELAQLANNKLLQKLLNGFLDYDGKIR--HTLNKRTYLEVTLLRI 362 >UniRef50_Q1YTP5 DNA polymerase III, delta prime subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTP5_9GAMM Length = 311 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 96/322 (29%), Positives = 144/322 (44%), Gaps = 22/322 (6%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 PW + L +S +GR HA+LI G+G L AL++ L+C +CG C+ Sbjct: 7 PWHEDAWASLNSSIDSGRLPHAVLISGDQGIGKLRLATALAQRLICSAEMVKYACGTCKT 66 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C L AG+HPD L PE+ + +D VR++ E L++ A+ GG KV + A + A Sbjct: 67 CNLFSAGSHPDITYLEPEEKGKAIKIDPVRKLCESLSKTAQQGGWKVAIIAPAEAMNINA 126 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 ANALLK LEEP ++T L + P RL AT+RSRC+ + P A+ WL+ +VT + Sbjct: 127 ANALLKNLEEPQSKTLLILVSHRPSRLSATIRSRCQKLSMPTPEADIALQWLT-DVTNDR 185 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAA--LNHEQAP 242 A L L+ G P AL Q DN + R + L V G L+AA Sbjct: 186 IAAEQVLPLAGGRPLLALDYLQSDNLEQRRQF-ETLVAEVADGSLSPLVAAQQCQKLDGE 244 Query: 243 ARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMS 302 + W + + ELA+ + L + R ++S Sbjct: 245 QSIDWFSRYIHRL-----------------ATTELADK-PNTALFGFSDKLLLARNWILS 286 Query: 303 VTGINRELLITDLLLRIEHYLQ 324 N ++L +L + + Sbjct: 287 GNNPNPQMLWEELFMDWVMVFK 308 >UniRef50_B0K122 DNA polymerase III, delta prime subunit n=10 Tax=Thermoanaerobacteraceae RepID=B0K122_THEPX Length = 324 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 124/319 (38%), Gaps = 11/319 (3%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + +A L G+G + + + C + + K C C C Sbjct: 7 HETVLNIFKNVISQNKISNAYLFVGEEGLGKRFMAEYFAMMINC-KGETAKPCFKCSSCL 65 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + HPD + + PE+ N++ VD +R +T ++N K+ + A +T AA N Sbjct: 66 KVMDKNHPDVFFIKPEE--NSIKVDTIRYITNEINIRPYEANKKIFIIDQADKMTAAAQN 123 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDA 186 A LKTLEEPP F L + + LL T+ SRC + +L E +S+ Sbjct: 124 AFLKTLEEPPLYGLFILIASQQQELLPTIVSRCNIVRFNKENRNTIKNYLMFEHDISEKE 183 Query: 187 LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVP----SGDWYSLLAALNHEQAP 242 ++ G+ A L + R Q + + N + Sbjct: 184 AEVLAHIADGNFAQANKLTNNEYLNFRRETIQEIEKILTIKGFEVIEEFEFFDKNKDNIE 243 Query: 243 ARLHWLATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 L L + + D L K A+ + N+D + E+ + L+ ++L I+ + Q+ Sbjct: 244 EILKILLSYMRDLLVFKATKDASFIKNIDFLNRIQEMESRLTINKLNNIINRIEQFNSQI 303 Query: 301 MSVTGINRELLITDLLLRI 319 + IN +L + +L L + Sbjct: 304 --NSNINYQLAVENLFLDM 320 >UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W8W3_ATOPD Length = 755 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 83/359 (23%), Positives = 136/359 (37%), Gaps = 44/359 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + + HA L G G + L++ +LC + Sbjct: 7 KYRPQTFEQVVGQKHVVGTLKRAVLEQKLSHAYLFCGPRGTGKTTMARLLAKAILCHEAP 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 GH G C CQL+ AG HPD + + + GVD VRE + + + G KV Sbjct: 67 GHLPDGTCEDCQLIAAGQHPDVFEI---DAASNTGVDNVREEIISRASYAPVCGKGKVYI 123 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT AA NALLKTLEEPP+ F + T +P+++LAT+ SR + Sbjct: 124 IDEVHMLTSAAFNALLKTLEEPPSHVTFIMCTTDPQKILATILSRVQRFDFRSIAADEMA 183 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG---------DNWQARETLCQ- 218 L + T A+ +R + G AL+ + R+ L Q Sbjct: 184 EHLISVCKNEGFTYEDAAIDLIVRYARGGMRDALSSLEQLSVYGGGVISEQTVRDVLGQS 243 Query: 219 ------ALAYSVPSGDWYSLLAALNH--EQAPARLHWLATL---LMDALKRH----HGAA 263 + A ++ D SL +N E L + L + D A Sbjct: 244 SGSLINSAALALAQRDISSLFTTVNTLFEGGKDLLQFTRELAAHVRDLYVATAVGVDSPA 303 Query: 264 QVTNVDVPGLVAELANHL-SPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 + + + A S RL +L + Q+ T +N+ L++ ++ Sbjct: 304 LANSSASTEQLTKEAQAFGSVDRLSRVLTVLGDAANQMR--TAVNQRLVLEVTFTKLAR 360 >UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bacillus cereus group RepID=B7IZ38_BACC2 Length = 548 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 67/353 (18%), Positives = 133/353 (37%), Gaps = 50/353 (14%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-PQGHKSCGHCRGCQLMQA 70 + + + + + HA + G G + ++ L C+ + C C C+ ++ Sbjct: 25 QTIQNALKLAKFSHAYMFTGPRGTGKTTIAKLIATSLNCESLNNEGEPCNECSQCKAIRG 84 Query: 71 GTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLK 130 +H D + + GV+ +RE+ E++ G KV + + +L+ A NALLK Sbjct: 85 NSHADVLEI---DAASNNGVEQIREIREQVAYAPGTGKYKVYIIDEVHMLSTGAFNALLK 141 Query: 131 TLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQD 185 TLEEPP F LAT + ++ AT+ SRC+ + + L EV + +D Sbjct: 142 TLEEPPKHVIFILATTDVHKIPATIISRCQRFDFRRIGPRDIIERLRHVAIKEEVKIEED 201 Query: 186 ALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPA-- 243 AL L+ G AL+L +T+ A ++ D ++ ++ E+ A Sbjct: 202 ALQLLGMLAQGGMRDALSLMD-------QTIAFATNETITKDDVSEVVGRISIEKIEACI 254 Query: 244 ---------------------------RLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE 276 L L L D + + N+ L ++ Sbjct: 255 GDLLKGNTIEILNLINQVILNGKEPIYLLEDLIGYLRDLVISKAFEVKEDNITTAILNSK 314 Query: 277 LANHLSPSRLQA---ILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 L + ++ + ++ ++ + N ++ + L+++ Q Sbjct: 315 FYELLEEGEIHKMQMMIRKLTEVKNEMK-FSN-NAQVSLEVGLIQLATEAQEE 365 >UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C6MGX6_9PROT Length = 537 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 77/333 (23%), Positives = 122/333 (36%), Gaps = 37/333 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + + R HHA L+ G+G + L++ L C+ Sbjct: 10 KWRPRNFTELTGQEHVVRALTNALEQNRLHHAYLLTGTRGVGKTTIARILAKSLNCETGI 69 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + +G+ D L + VD +RE+ E G K+ + Sbjct: 70 TATPCGTCTTCVQIDSGSFIDLVEL---DAASNTQVDNMRELLENALYAPTCGRYKIYII 126 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPPA F LAT + +++ T+ SRC L P+ Sbjct: 127 DEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDQQKIPITVLSRCLQFNLKQIPQPQITD 186 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +L R + GS AL+L + E + + + Sbjct: 187 HLKKILAQEKIPCDILSLQLVARAAQGSMRDALSLLDQAIAFGAGKIEEASVRDMLGIID 246 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDA------LKRHHGAAQVTNVD 269 + LL AL + L + L D + Q D Sbjct: 247 HSYLFDLLDALTQKNGLKLLSLADEMEARCLSFDCALQDLAVILHRIALAQAIPQALGED 306 Query: 270 VPGLVA--ELANHLSPSRLQAILGDVCHIREQL 300 +P + LA L+P +Q H R L Sbjct: 307 IPDYIRINALAKILAPDDIQLFYQIALHGRGDL 339 >UniRef50_Q0B0W5 DNA-directed DNA polymerase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0W5_SYNWW Length = 499 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 73/363 (20%), Positives = 134/363 (36%), Gaps = 45/363 (12%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P L + + G+ HA L G G ++ +++ + C+ Sbjct: 10 WRPRRFAEVVGQEKTVTALRNAVREGKLSHAYLFSGPRGTGKTSIAKIIAKAVNCENLSE 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C CQ + G D + + G+D +R++ EK+ G KV + Sbjct: 70 GEPCNQCSSCQDINNGNFMDVIEI---DAASNRGIDEIRDLREKVRVLPAQGKNKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKT+EEPP F LAT E ++ AT+RSRC+++ Sbjct: 127 EVHMLTTEAFNALLKTIEEPPDAVIFILATTESHKIPATIRSRCQVYNFRRLTTAEITER 186 Query: 176 LS-----REVTMSQDALLAALRLSAGSPGAALALFQ------GDNWQARETLCQALAYSV 224 LS + + +ALL R + G AL++ G+N +++ + + + V Sbjct: 187 LSDVAANDGIILEPEALLLLARRANGGMRDALSMLDQIYSYKGNNSISKQDVLEVM-GLV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHW---------------------LATLLMDALKRHHGAA 263 L+AA+ + P+ + L L+ + Sbjct: 246 DDAFMAQLIAAVLSQDTPSIIGILGTAFSQGKEAQQLAREASMFLRDFLLYLVAGKEADL 305 Query: 264 QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 V + + + ++ L L + ++L G ++ L+ + I Sbjct: 306 VVAGEESQAFFEQQKSQINMQNLLRALRIMMDTADKLRFSEG--QKYLLEIAFMEIATLF 363 Query: 324 QPG 326 Sbjct: 364 SEE 366 >UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 Tax=Desulfuromonadales RepID=Q39Q40_GEOMG Length = 582 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 82/358 (22%), Positives = 133/358 (37%), Gaps = 42/358 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + +GR HA L G+G + L++ L C+Q Sbjct: 9 KWRPQTFSDLTGQEHVSQTLQNAIDSGRIAHAFLFTGARGVGKTSSARILAKALTCEQGM 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C + AGT D + G + GVD +RE+ E + K+ + Sbjct: 69 SPEPCNVCPACTEITAGTAVDVLEI---DGASNTGVDDIRELRENVKYLPSRLRYKIFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F AT EP ++ T+ SRC+ P V Sbjct: 126 DEVHMLSTNAFNALLKTLEEPPPHVKFIFATTEPHKVPITILSRCQRFDFRRIPLGKVVG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L + +S +L R GS +L++ Q R+ +L V Sbjct: 186 RLRHIVDQEGIAISDASLTMVARKGDGSMRDSLSVLDQVLAFCGDQVRDEEVVSLLGVVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-------------LMDALKRHHGAAQVTN-VDVP 271 AA+ L +A + L+D L+ V + D+ Sbjct: 246 RRLLLDATAAVFGRDTRTVLDIVARVDEFGYNMRQFCGELIDHLRNLLILKAVGDGTDLL 305 Query: 272 GL-------VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 L + + A + LQ L + +L + L++ L+++ Sbjct: 306 DLSEAELATLRQQAESVPLDDLQRHLTVLLRADGELGHTSF--PRLVLEMALVKMATL 361 >UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Bacillales RepID=DPO3X_BACSU Length = 563 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 120/335 (35%), Gaps = 39/335 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P D + L + + HA L G G + ++ + C+ Sbjct: 10 FRPQRFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAKAVNCEHAPV 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G+ D + + GVD +R++ +K+ KV + Sbjct: 70 DEPCNECAACKGITNGSISDVIEI---DAASNNGVDEIRDIRDKVKFAPSAVTYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPP F LAT EP ++ T+ SRC+ Q V Sbjct: 127 EVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITSQAIVGR 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQ------GDNWQARETLCQA----- 219 + + ++ + + +L + G AL+L GD + + L Sbjct: 187 MNKIVDAEQLQVEEGSLEIIASAADGGMRDALSLLDQAISFSGDILKVEDALLITGAVSQ 246 Query: 220 -----LAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQ---VT 266 LA S+ + L LN + + + D L + Sbjct: 247 LYIGKLAKSLHDKNVSDALETLNELLQQGKDPAKLIEDMIFYFRDMLLYKTAPGLEGVLE 306 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 V V EL+ + L ++ + +++ Sbjct: 307 KVKVDETFRELSEQIPAQALYEMIDILNKSHQEMK 341 >UniRef50_Q6FAW7 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=Q6FAW7_ACIAD Length = 711 Score = 276 bits (707), Expect = 6e-73, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 116/318 (36%), Gaps = 31/318 (9%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 L ++ + GR HHA L G+G + L++ L C+ C C C+ + G Sbjct: 25 RALTSALERGRLHHAYLFTGTRGVGKTTIARILAKCLNCETGITSTPCEVCATCKAVNEG 84 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 D + + V+ RE+ + + G KV + + +L+ + NALLKT Sbjct: 85 RFIDLIEI---DAASRTKVEDTRELLDNVPYAPTQGRFKVYLIDEVHMLSTHSFNALLKT 141 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPP F AT +P++L T+ SRC L P + L ++ +DA Sbjct: 142 LEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVDEITSHLTTILAKEQIEADKDA 201 Query: 187 LLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPSGDWYSLLAALNHEQAP 242 + + GS AL+L + + + Y L+ A++ Q Sbjct: 202 IWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEMLGLIDRTIIYDLILAIHQNQTA 261 Query: 243 ARLHWLATLLMDALKRHHGAAQVTNV-------------------DVPGLVAELANHLSP 283 L AL Q+ + ++ + +LA +S Sbjct: 262 RVSQLLMQFRQQALDVSLVLDQLISTLHELALLQYLPELSLKYSEEINQKILKLAKIVSA 321 Query: 284 SRLQAILGDVCHIREQLM 301 LQ C R +L Sbjct: 322 QDLQLYYQIACKGRSELQ 339 >UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBF2_9BACT Length = 638 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 128/345 (37%), Gaps = 37/345 (10%) Query: 13 KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP-QGHKSCGHCRGCQLMQAG 71 L + ++G+ HA L G+G ++ + C+ P + ++C C C+ Sbjct: 28 TLKNAVKSGKLAHAYLFCGPRGVGKTTCARIFAKAINCEHPREDGEACNECESCRAFNEQ 87 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 + + L + GVD ++ + E+ ++G KV + + +L+ AA NA LKT Sbjct: 88 RSYNIFEL---DAASNNGVDQIKVLMEQTRIPPQVGKYKVFIIDEVHMLSTAAFNAFLKT 144 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPP F LAT E ++L T+ SRC+++ + L + + A Sbjct: 145 LEEPPQHVIFILATTEKHKILPTILSRCQIYDFERMTVANTINHLKMVAEKEGIQYEEQA 204 Query: 187 LLAALRLSAGSPGAALALFQGDNWQ-----ARETLCQALAYSVPSGDWYSLLAALNHEQA 241 L + G AL++F + + + L + S +++ L+ + Sbjct: 205 LAVIAEKADGGMRDALSIFDQAASFCMGNITYQKVIEDLN-VLDSDNYFRLVDLALENKV 263 Query: 242 PARLHWLATLL---MDALKRHHGAAQ-----------------VTNVDVPGLVAELANHL 281 + L +L D G AQ T+ D A Sbjct: 264 AEMMVTLDGILNRGFDGGNMIQGLAQHVRNVMMAKDPQTLPLLETSDDQKAKFQAQAQKA 323 Query: 282 SPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 L L + + + N+ LL+ L++I QP Sbjct: 324 PTPFLYKALELMNQCDIHYRASS--NKRLLVELTLIQIGQITQPE 366 >UniRef50_B4UA58 DNA polymerase III, subunits gamma and tau n=3 Tax=Aquificaceae RepID=B4UA58_HYDS0 Length = 421 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 74/367 (20%), Positives = 135/367 (36%), Gaps = 40/367 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L ++ + HHA + G G ++ L C PQ Sbjct: 9 KYRPKTFKELIGQEIPATILKNAFLYQKIHHAYIFAGHKGTGKTTTARIFAKVLNCLNPQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C CQ ++ GT D + + G+D +R V E + G KV + Sbjct: 69 EGEPCNACPNCQAIEKGTFVDLIEM---DAASNRGIDEIRAVREGASYLPMQGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT A NALLKT+EEPP F L T E +++L T++SRC+ + ++ T Sbjct: 126 DEAHMLTKEAFNALLKTIEEPPPSLIFILCTTEFDKILPTIQSRCQKLVFSRASKENIKT 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 +L + + ++AL L+ S A +L N + + +++ V Sbjct: 186 YLRRIANQENIEIDEEALDVLSDLADDSMRDAASLLDQASTYGNNKVTIDIVKSMFGPVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL------LMDALKRHHGAAQVTNVDVPGLVAELAN 279 L L ++ L T+ + L ++ N+ + E Sbjct: 246 KASIRKFLELLIESDTKEAINMLNTINEKGYNVR--LFWEGVYKEIKNILKAFAIGEAEE 303 Query: 280 HLSPSRLQAILGDVCHIREQLMSVTGINRE----LLITDLLLR---------IEHYLQPG 326 L+ L ++ + + + L + +L+ I L+ Sbjct: 304 EFYKKMLEKPLEVFLYLEDIINQGFSAMYQKDPILALEITVLKASLIKDFVPISELLKES 363 Query: 327 VVLPVPH 333 + LP Sbjct: 364 LDLPTKS 370 >UniRef50_A6QBX8 DNA polymerase III, gamma/tau subunits n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QBX8_SULNB Length = 666 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 129/341 (37%), Gaps = 30/341 (8%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L + R HA L L G G + ++ LLC+Q Sbjct: 8 KYRPATFDDLIGQDSVSQTLSLALDGNRLSHAYLFSGLRGSGKTSTARIFAKALLCEQGT 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + H D + + G+D ++++ E K+ + Sbjct: 68 TSHPCGTCTHCVMAAENRHMDIIEM---DAASNRGIDDIKDLIEHTKYKPSSARYKIFII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F LAT +P +L AT+ SR + P+ ++ Sbjct: 125 DEVHMLTTQAFNALLKTLEEPPDFVKFILATTDPLKLPATILSRTQHFRFKKIPQNLVLS 184 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L ++ ++AL R AGS +L L ++ + + + Sbjct: 185 HLEHIMNLEKIEYEKEALEIIARSGAGSLRDSLTLLDQAIVYSKNFVDVGTVTGMLGIIE 244 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAEL---ANHLS 282 +LL + + L ++ L + A + + L L + L+ Sbjct: 245 PSLLEALLGNIVKKDTTKILEFIK------LASDYEAEMILDELTLYLKELLLTGSGKLN 298 Query: 283 PSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 P ++ + + L + + E +++ L ++ L Sbjct: 299 PMIIERFFRVIAESKSLLALGS--DGEFVLSLALFKMMEAL 337 >UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS6_UNCTG Length = 531 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 123/352 (34%), Gaps = 35/352 (9%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + L S R HA L G G + L++ L C+ Sbjct: 9 KFRPQNFDEVVGQEHISQTLKNSISEKRIAHAYLFSGPRGCGKTTMARILAKALNCKNGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C + + D + G + G+D +R + E + K+ + Sbjct: 69 TIKPCGVCENCVEISKSSSVDVLEI---DGASNNGIDDIRVLRENVKFSTASSKYKIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +T A NALLKTLEEPPA F +AT E ++ T+ SRC+ + V Sbjct: 126 DEAHQITAQAFNALLKTLEEPPAHVIFIMATTEQHKIPITILSRCQRYRFKLISGAEMVC 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 + + +AL S GS AL+L + + + L +P Sbjct: 186 AIKSIGQEEGFEIDDEALNIVTSASGGSMRDALSLLDQAVSSNTGRITGDYMRGLLGLLP 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLL---MDALKRHHGAAQVTNVDVPGLVAELANHLS 282 S+ + A L + + + L+ + + + +S Sbjct: 246 KDIIVSVTDNIAKGDIHAILKIVKEIYEQGYNILQFARDLREHLRNVMIYSINPAIAEIS 305 Query: 283 PS--RLQAILGDVCHIREQLMSVTGINREL-----------LITDLLLRIEH 321 ++ + + + + +++ L L+ LL++ Sbjct: 306 SEDKKIFDVQKSLFTVSRYVRMNNLLSKALEEMRWHDQPRILLEMYLLKMSE 357 >UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 Tax=Gammaproteobacteria RepID=A1AWB5_RUTMC Length = 529 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 75/329 (22%), Positives = 127/329 (38%), Gaps = 26/329 (7%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L+ + A HH L G+G + L++ + C+Q K C C C + G Sbjct: 28 KTLINALDANNLHHGFLFTGTRGVGKTTIARILAKSINCEQGISSKPCDKCATCVEIDKG 87 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 D L + GVD +R++ E K+ + + +L+ + NALLKT Sbjct: 88 QSIDLIEL---DAASHTGVDNMRDILENAQYMPSKNRYKIYLIDEVHMLSKNSFNALLKT 144 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPP F L T +P++L T+ SRC L + L + ++ + A Sbjct: 145 LEEPPEHVKFLLVTTDPQKLPVTVLSRCLQFTLQQLTHDEILEQLKFIMNAEVLSYEESA 204 Query: 187 LLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVPSGDWYSLLAALNHEQAP 242 L GS AL+L + T+ +A+ V D L L + A Sbjct: 205 LGQIADFGNGSMRDALSLLDQSISYGKGTVTNADIKAMLGLVHHDDIIKLTTHLFSQDAK 264 Query: 243 ARLHWLATL------LMDALK------RHHGAAQVTNVDVPGLVAELANHLSPSRLQAIL 290 A + ++ L L +ALK +Q+ N + + L+ +S LQ Sbjct: 265 AVIDFIKDLSRRGENLSNALKDLSSLFHKISISQIVNTESNKTIQNLSTQISNFDLQIFY 324 Query: 291 GDVCHIREQLMSVTGINRELLITDLLLRI 319 + + + + ++ LLR+ Sbjct: 325 QMSINGSKDMALAP--SEQIGFEMTLLRM 351 >UniRef50_Q7VR24 DNA polymerase III, delta prime subunit n=2 Tax=Candidatus Blochmannia RepID=Q7VR24_BLOFL Length = 333 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 111/325 (34%), Positives = 164/325 (50%), Gaps = 4/325 (1%) Query: 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60 M YPWL + +++ SY +GHHALL+ + G+D LI +++R+L+C+ K C Sbjct: 1 MIQYPWLNTIYNQILFSYDIKKGHHALLLYSTQNNGEDILINSIARWLICKNSFKIKYCN 60 Query: 61 HCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 C C LM G HPDYY L + ++GVD++R+ + + + +K+V++ L Sbjct: 61 SCSDCYLMNIGQHPDYYQLDLKYQAQSIGVDSIRDCIDSIYRFTQYSKSKIVFIQYIEYL 120 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 TD A N LLK LEEPP T+FF +R+ + TL SRC + PP E + WL Sbjct: 121 TDEAVNMLLKILEEPPDNTYFFFRSRKIINIPLTLLSRCVKWVVTPPVESLGIEWLINNQ 180 Query: 181 TMSQDA-LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAAL-NH 238 + L ALRL+ GSP A + Q D W+AR LC + + +G++ LL L N Sbjct: 181 KLDNILFLTTALRLNYGSPIEAKVMLQSDQWKARVELCNHINDVIKNGNFLQLLPILKNK 240 Query: 239 EQAPARLHWLATLLMDALKRHHGAAQ--VTNVDVPGLVAELANHLSPSRLQAILGDVCHI 296 E + WL TLL+DALK G + N+D L+ ++ + L L + Sbjct: 241 EHRYIFISWLITLLVDALKYRQGVKEKFFINLDQLQLILNISVYWKVLSLHNQLSQWIIL 300 Query: 297 REQLMSVTGINRELLITDLLLRIEH 321 IN ELL+T LL + Sbjct: 301 FYYFQRFDNINHELLLTCRLLNWQQ 325 >UniRef50_B9CMB1 DNA polymerase III subunit gamma/tau n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CMB1_9ACTN Length = 723 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 89/372 (23%), Positives = 148/372 (39%), Gaps = 47/372 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + G+ HA L G G + L++ LLC++ Sbjct: 7 KYRPQTFEQVVGQKHVVGTLKRAVLEGKVSHAYLFCGPRGTGKTTMARLLAKALLCRKAP 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 G G C CQL+ AG HPD + + GVD VRE + + N G KV Sbjct: 67 GQLPDGTCEECQLIAAGNHPDVVEI---DAASNTGVDNVREEIISRANYAPVRGKGKVYI 123 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT AA NALLKTLEEPPA F L T +P+++L T+ SR + + + Sbjct: 124 IDEVHMLTTAAFNALLKTLEEPPAHVTFILCTTDPQKVLGTVLSRVQRFDFHAIGNEEML 183 Query: 174 TWLSREVTM-----SQDALLAALRLSAGSPGAA----------------LALFQGDNWQA 212 + L + AL +R + G A LA+ Q +A Sbjct: 184 SHLQQVCEAESFQYDARALELIVRHARGGMRDALTSLEQLSVFGDGVVSLAIAQDFLGEA 243 Query: 213 RETLCQALAYSVPSGDWYSLLAALN--HEQAPARLHWLATL--------LMDALKRHHGA 262 +L ++ ++ D +L +N ++ L + L +M A+ A Sbjct: 244 SGSLLAHVSTAIAKRDVSTLFEQVNTLVDEGRDVLQFTRELAAHIRNAYVMAAVGPDTSA 303 Query: 263 AQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 +T+ + L E+ + S RL L + Q+ + + N+ L++ + Sbjct: 304 LTITDDERTQLAQEVREYRSADRLARALTILGDASNQMRTAS--NQRLVLE---IAFTRL 358 Query: 323 LQPGVVLPVPHL 334 +P L + L Sbjct: 359 ARPTSDLTLESL 370 >UniRef50_B8DQU3 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfovibrio RepID=B8DQU3_DESVM Length = 688 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 108/284 (38%), Gaps = 16/284 (5%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L + R A L G+G + L++ L C++ + C C C+ + G H Sbjct: 28 LSRAAAEDRVAPAYLFSGTRGVGKTTIARILAKALNCEKAPTGEPCNTCEQCRKVVMGNH 87 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D + G + G++ R + E + G KV + +A +LT A NALLKTLE Sbjct: 88 VDVVEI---DGASNRGIEDARRLREAIGYAPMEGRYKVFIIDEAHMLTREAFNALLKTLE 144 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALL 188 EPP F LAT EP + T+ SRC+ PE L A+ Sbjct: 145 EPPPRVTFVLATTEPHKFPVTIISRCQHFTFKRLPENELEAHLTGVLTREGQDFDPAAVR 204 Query: 189 AALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWL 248 R +AGS +++L + L A V L + A + Sbjct: 205 LIARRAAGSVRDSMSLLGQVLALGGDRLTVEGARGVLGLAGQELFFEVMQALASQDCVAV 264 Query: 249 ATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGD 292 + ++ D L + VD+ + ELA+ + G+ Sbjct: 265 SAVVRDLLDK--------GVDIGFFLRELASTWRNLFMLRQAGE 300 >UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z526_9NEIS Length = 657 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 113/260 (43%), Gaps = 19/260 (7%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + R HHA L+ G+G + L++ L C+ Sbjct: 30 KWRPKRFADLVGQEHVVRALTNALAGERLHHAYLLTGTRGVGKTTIARILAKSLNCEAGV 89 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G + CG C C+ + AG D + + G+D +REV E G KV + Sbjct: 90 GAEPCGECSACRQIDAGRFVDLLEI---DAASNTGIDNIREVLENAQYAPTSGRYKVYII 146 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPPA F LAT +P+++ T+ SRC L Q Sbjct: 147 DEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFSLRNMTPQQVAG 206 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+R +V+ AL R +AGS AL+L + E +A+ +V Sbjct: 207 HLARVLDVEQVSYEAPALALLGRAAAGSMRDALSLLDQAIAYGVGKVEEGGVRAMLGAVD 266 Query: 226 SGDWYSLLAALNHEQAPARL 245 Y+LL AL P + Sbjct: 267 RAYLYTLLEALAEADGPRLI 286 >UniRef50_C9RAG1 DNA polymerase III, subunits gamma and tau n=1 Tax=Ammonifex degensii KC4 RepID=C9RAG1_AMMDK Length = 427 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 82/339 (24%), Positives = 125/339 (36%), Gaps = 32/339 (9%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P L + GR HA L G G + L++ L C Q Sbjct: 11 WRPQQFAQVVGQAHVTRTLRNALAMGRIAHAYLFAGPRGTGKTSTARILAKALNCLQGPT 70 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 C C C + GT D + + G+D +RE+ E++ KV + Sbjct: 71 PVPCDTCPQCLSIMEGTSLDVLEI---DAASRRGIDEMRELRERVRLSPVHSRYKVYIID 127 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 +A +LT AANALLKTLEEPP + F LAT EP ++ T+ SRC+ P Sbjct: 128 EAHMLTSEAANALLKTLEEPPPQVVFILATTEPHKIPVTILSRCQRFDFRRLPTALIEEH 187 Query: 176 LSRE-----VTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPS 226 L+R V + ++AL + + GS AL+L + R L VPS Sbjct: 188 LARVAETFPVKVEREALRLLAQAAEGSMRDALSLLDQALAWAEGELRAIDVADLLGKVPS 247 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE------LANH 280 +L L L L++ ++ + D+ + E Sbjct: 248 QALEEMLTYLQKGDLAGALR-----LVNEIEERGKDLNLFVRDLILRLREEILRHLREER 302 Query: 281 LSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 +PS L L + + + L + L+R+ Sbjct: 303 KAPSWLLRSLAALHQALVDMRLSPL--KSLTLELALIRL 339 >UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfitobacterium hafniense RepID=B8FY14_DESHD Length = 554 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 79/365 (21%), Positives = 129/365 (35%), Gaps = 38/365 (10%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P D + L + + HA L G G L++ L C+ +G Sbjct: 10 WRPKNFKDMVGQDHVTKTLTNALMQSKVAHAYLFSGPRGTGKTTTAKVLAKALNCEHREG 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C + G+ + + + + G+D +R++ +K+ A KV + Sbjct: 70 VEPCNQCAFCLSIDQGSAMEVFEI---DAASNRGIDEIRDLRDKVRLSAGESKYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP F LAT E ++ T+ SR + P + + Sbjct: 127 EVHMLTTEAFNALLKTLEEPPERVVFILATTEVHKIPLTILSRVQRFEFHRIPLEQIHSH 186 Query: 176 LSR-----EVTMSQDALLAALRLSAGSPGAALALFQ-----------GDNWQAR----ET 215 L + + +AL + S G AL++ +Q E Sbjct: 187 LDKVCQTIGRDVEPEALQIIAQKSEGGLRDALSILDQCLLLDGKLGVEQVYQVLGMVGEE 246 Query: 216 LCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQV-TNVD 269 L + +GD+ L L + L + AL A Sbjct: 247 FSAQLVDHLLTGDYAKALGCLGEGINQGMDPRQIIRELLDYMRQALLYASTQAFPQVAPH 306 Query: 270 VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVL 329 + +A L L +G + QL N L LL+++ + QPG Sbjct: 307 LREHLAYQCQKLGLKTLLQWIGILLQGESQLK--YAANARLAAELLLVQVIYDSQPGYSK 364 Query: 330 PVPHL 334 P + Sbjct: 365 ESPQV 369 >UniRef50_C5S1I5 DNA polymerase III subunits gamma and tau n=2 Tax=Actinobacillus minor RepID=C5S1I5_9PAST Length = 698 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 123/329 (37%), Gaps = 33/329 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + GR HHA L G+G ++ ++ L C+ Sbjct: 9 KWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAKGLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ RE+ + + +G KV + Sbjct: 69 TATPCGECANCKAIEEGRFIDLIEI---DAASRTKVEDTRELLDNVQYKPTVGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALDQTQIAH 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L ++ A+ + + GS +L+L N + + + Sbjct: 186 HLEFILKAEQIPYETAAIEKLAKAAEGSIRDSLSLTDQAIAVTNANVTLSAVSQMLGLID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLA----------TLLMDALKRHHGAAQVTNVD----VP 271 L+ AL + + + LL D + H A + V Sbjct: 246 DHQPLELIMALANADGEKVMAVIQNVAEKGVDWNQLLNDVAEVLHQIAMLQLVKSAEQEE 305 Query: 272 GLVAELANHLSPSRLQAILGDVCHIREQL 300 + LA ++P +Q + +++L Sbjct: 306 SAIHFLAKQMAPEDIQFFYQVILMGKKEL 334 >UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=Desulfuromonadales RepID=Q3A7L0_PELCD Length = 582 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 80/360 (22%), Positives = 133/360 (36%), Gaps = 42/360 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L + + GR HHA L G+G + ++ L C+Q Sbjct: 9 KYRPQSFDDLVGQEHVSQTLGNAIKTGRVHHAFLFTGARGVGKTSAARIFAKALNCEQGL 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C+ C+ + AG D + + G + GVD +RE+ E + K+ + Sbjct: 69 SPQPCNVCQSCREISAGQGLDVFEI---DGASNTGVDDIRELRENIRYLPSRSRYKIFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F AT EP ++ T+ SRC+ P V Sbjct: 126 DEVHMLSTNAFNALLKTLEEPPEHAKFIFATTEPHKIPITILSRCQRFDFRKIPLPLIVA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L + +++S+ +L R GS A + F E Q L V Sbjct: 186 RLKEIAAAEGISISERSLGLVARRGEGSMRDAQSTFDQVIAFCGDAVGEDDVQGLLGMVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-------------LMDALKRHH--------GAAQ 264 L +L + LH + + L++ L+ A Sbjct: 246 RRLLVDTLESLLGHDSRRLLHCVCRVDELGHSFRQFCRELVETLRSLVVLKVVPEPEALL 305 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 D + L+ + L+ + + +L + L + LLR+ H Sbjct: 306 DATPDELEELRRLSATVELEDLERAVTVLVRTEAELAGSSF--PRLALEMALLRLAHLPS 363 >UniRef50_UPI00016C46EC DNA polymerase III gamma and tau subunits n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46EC Length = 614 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 78/357 (21%), Positives = 131/357 (36%), Gaps = 44/357 (12%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC--QQ 52 R+ P + LV + ++GR HA L G+G + L++ L C Sbjct: 23 RYRPQQFSELIGQEHVAGALVNALKSGRVAHAYLFTGARGVGKTSAARILAKALNCLKTD 82 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 C C C+ + G D + G + V+ VR++ + + G K+ Sbjct: 83 KATPTPCDECDSCRAVMTGDDVDVLEI---DGASNNKVEEVRDLRQNVGFRPARGRYKIY 139 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ +A NALLKTLEEPP F LAT E +++ T+ SRC+ A Sbjct: 140 IIDEVHMLSTSAFNALLKTLEEPPEHVKFILATTEVQKIPITILSRCQRFDFAHVGPGKI 199 Query: 173 VTWLSREVT-----MSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYS 223 L R V DAL R +AGS + +L + TL A+ + Sbjct: 200 FEQLKRIVEREGHQADDDALRLVARRAAGSMRDSQSLLDQLLASSSGTLTAGQVTAVLGT 259 Query: 224 VPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTN------------VDVP 271 L A+ L +A + L+ QV DV Sbjct: 260 AGDDRVIELAKAILANDPKTALDRIAEWVERGLQIGELIDQVVEYWRALMLVSCGGPDVR 319 Query: 272 GL---------VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 L + A +S + A L + + ++ + ++L+ ++R+ Sbjct: 320 ELPVSPNQHEAIRTQAKAVSLDTVLAGLEILTATKARMRGTPHV--QVLLEMAVVRL 374 >UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Tax=Symbiobacterium thermophilum RepID=Q67TJ5_SYMTH Length = 570 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 82/338 (24%), Positives = 132/338 (39%), Gaps = 35/338 (10%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 L + GR HHA L+ G G + L++ + C PQ + C C C+ + +G Sbjct: 26 RTLRNAIVQGRLHHAYLLSGPRGTGKTTVARILAKAVNCLNPQDGEPCNECEACRRITSG 85 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 D + + G+D +R++ +K+N KV + + +LT+ A NALLKT Sbjct: 86 EALDLIEI---DAASNRGIDEIRDLRDKVNFAPVELKYKVYIIDEVHMLTEPAFNALLKT 142 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPPA F LAT E ++L T+ SRC+ V L + + S +A Sbjct: 143 LEEPPAHVLFVLATTEKQKLPITILSRCQAFDYRRLSADEIVARLREVCGKQGLKASPEA 202 Query: 187 LLAALRLSAGSPGAALALFQ-----GDNWQARETLCQALAYSVPSGDWYSLLAALNHEQA 241 L A R + G AL+L + + A+ + P + +L L Sbjct: 203 LAAIARHADGGMRDALSLLDQVMAYAAEGEITLDMTLAVLGTAPLDQFLALDGHLLRGDV 262 Query: 242 PARLHWLATL-----------------LMDAL--KRHHGAAQV-TNVDVPGLVAELANHL 281 A L WL + L D L K GA + + + A Sbjct: 263 GAALLWLDEMVRAGKDLRQLVRDYLAHLRDLLLVKLEAGAQVLGLPAEALEQMRARAEPF 322 Query: 282 SPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + +L + + +L + LL+ L+R+ Sbjct: 323 AERQLIRAIRLLGQAETELRLSP--SPRLLVEVALIRL 358 >UniRef50_UPI0001C37DC8 DNA polymerase III subunits gamma and tau n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37DC8 Length = 539 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 126/355 (35%), Gaps = 42/355 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L +G+ HA L G G L++ + C+ + Sbjct: 8 KWRPMTFDDVISQQQTTDTLKNQIMSGKTAHAYLFTGSRGTGKTTCARILAKAVNCRNMK 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ +G D + + GVD +R++ + G K+ + Sbjct: 68 DGNPCLECDICRDADSGALTDIVEI---DAASNNGVDNIRDLRDAAVYTPDRGQYKIYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLK +EEPP F LAT E ++ AT+ SRC+ + Sbjct: 125 DEVHMLSAGAFNALLKIMEEPPPYVKFILATTEIHKVPATILSRCQRFDFRRIKPEDIAA 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG---DNWQARETLCQALAYSVPS 226 L E+T++ +L+ G A++L + E + A A Sbjct: 185 RLKYIAEQEELTLTDGGAAMIAKLADGGMRDAVSLLDRCSVGGEEIDEDVVSAAAGIAGR 244 Query: 227 GDWYSLLAALNHEQAPARLHWLATLL---MDALKRHHG-AAQVTN--------------- 267 + LL A+N L A+L D + +Q+ N Sbjct: 245 DYLFGLLEAINTGDTAKALSITASLYDMSKDIGRLCEELISQLRNIMLIKVSPDTAESLI 304 Query: 268 ---VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + + ELA+ + + + + + +NR + L+++ Sbjct: 305 VCVAEEMQKLRELADSTELDTIMSHISILQECSSNM--NRAMNRRVEFEMALIKL 357 >UniRef50_A5KMD2 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A5KMD2_9FIRM Length = 331 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 122/308 (39%), Gaps = 10/308 (3%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP-QGHKSCGHCRGC 65 + + + + A HA ++ G G L + L C+ + +CG CR C Sbjct: 10 HKNIIKYIQNAVTADAVSHAYILNGERGSGKKLLANLFAMSLQCENRDEDGDACGKCRSC 69 Query: 66 QLMQAGTHPDYYTLAPEKGKNTLGVDAVR-EVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 + G PD + EK NT+GV +R +V + + K+ + DA +++ A Sbjct: 70 RQAAGGNQPDIIRIMHEKP-NTIGVGDIRTQVNDDIMIRPYSSKYKIYIIADADMMSVEA 128 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 NALLKT+EEPP L T E LL T+RSRC + L +Q +L ++ + Sbjct: 129 QNALLKTIEEPPEYAVIMLLTENAETLLPTIRSRCVMMKLRNIKDQLVKKYLMEQLEVPD 188 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALN-----HE 239 + + G+ G A+ L + + + L ++ L+ A+ Sbjct: 189 YKADVCVAFAQGNMGKAIMLANSEYFNEIKEEVVHLLRNIDEMTVPDLMEAVKRCMIYKM 248 Query: 240 QAPARLHWLATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIR 297 + L +A D L K +V D + E A S ++ IL + + Sbjct: 249 EISDYLDMIAIWYRDVLIYKATRSVDRVVFSDQMKYIRERAKKSSYEGIENILDSLEKAK 308 Query: 298 EQLMSVTG 305 ++ + Sbjct: 309 ARMKANVN 316 >UniRef50_C7GZE0 DNA polymerase III, subunit gamma and tau n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZE0_9FIRM Length = 473 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 81/353 (22%), Positives = 144/353 (40%), Gaps = 42/353 (11%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + + +AG HA L+ + G G L +++ + C PQ K CG C C+ Sbjct: 23 QENIIKVFLNQLKAGSVSHAYLLCGIRGTGKTTLARLMAKAVNCLDPQ-KKPCGACENCR 81 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + +H D + + GVD VRE+ + + + KV + + +L+ A N Sbjct: 82 SITEESHMDVIEI---DAASNNGVDDVRELIDTVAYPPSVAEKKVYIIDEVHMLSQGAFN 138 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-------SRE 179 ALLKTLEEPP+ F AT +P ++ T+ SRC L E V L SRE Sbjct: 139 ALLKTLEEPPSHVIFIFATTDPNKIPKTILSRCMRFDLRRITESDLVKRLGFVCESCSRE 198 Query: 180 VTMSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQALAYSVPSGDWYSLLA 234 + +DAL + GS AL++ + + RE + ++L ++V G ++ Sbjct: 199 I--EEDALKLIAVNAEGSLRDALSILEQVMAIDEGIITREDVLESL-HAVGDGKIIEIMD 255 Query: 235 AL-----------------NHEQAPARLHWLATLLMDAL--KRHHGAAQVTN--VDVPGL 273 + + + L+ L L + + K + N D Sbjct: 256 GVLSNDLEKAIVTCNNAFDDGKDEKQFLNDLLIYLRNMMLAKVSGELDALINMHSDDINE 315 Query: 274 VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 + A+ +S ++ + ++ +R +S +LI L+++ + L P Sbjct: 316 LKRQASGVSMDFIERAIFEI--VRIIDLSKGASYPRILIEAGLIKVSNCLSPD 366 >UniRef50_B2V5N0 DNA polymerase III, subunits gamma and tau n=4 Tax=Hydrogenothermaceae RepID=B2V5N0_SULSY Length = 501 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 123/317 (38%), Gaps = 29/317 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + + R HA + G+G + LS+ L C+ P Sbjct: 9 KYRPKSFQEVIGQEHVVKTLKNAVKLDRVSHAYIFSGPRGVGKTTIARILSKVLNCKNPV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 ++SC C C + G+ PD Y + + G+D +R + + + G KV + Sbjct: 69 DYESCNQCENCIEIDKGSFPDMYEI---DAASNRGIDDIRMIRDNVGYQPIKGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT A NALLKTLEEPP F LAT E ++ T++SRC+ PP ++ Sbjct: 126 DEAHMLTKEAFNALLKTLEEPPPRNIFILATTELYKIPETIKSRCQTFIFKPPTKEQIKN 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 +L + ++ +DA+ + G + +L A L + D Sbjct: 186 YLLRILNNEKIPYEEDAVELLAQELEGGMRDSASLLDQAVTYAEGKLTR--------KDV 237 Query: 230 YSLLAALNHEQAPARLHWLATLLMD----ALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 +L + + L + L +D + NV L+ + L Sbjct: 238 EEILGIVPYSYVQKFLRNIKDLKVDENIKLIDTLEDEGYDINVFWKQLLEAIHKTLIDLA 297 Query: 286 LQAILGDVCHIREQLMS 302 L D +E L S Sbjct: 298 LDK--EDEIFSKEDLKS 312 >UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79 Tax=Bacillaceae RepID=Q65PK1_BACLD Length = 566 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 121/335 (36%), Gaps = 39/335 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P L D + L + + HA L G G + ++ + C++ Sbjct: 10 FRPQLFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKLFAKAVNCERAPV 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G+ D + + GVD +R++ +K+ KV + Sbjct: 70 SEPCNECSACKGITNGSISDVIEI---DAASNNGVDEIRDIRDKVKFAPSAVTYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPP F LAT EP ++ T+ SRC+ Q V Sbjct: 127 EVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITSQAIVGR 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVPS 226 + + ++ + AL + G AL+L + E L + +V Sbjct: 187 MKKIVEAEQLKVQDGALDIIASAADGGMRDALSLLDQAVSFSGEELTVDDALLITGAVSQ 246 Query: 227 GDWYSLLAALNHEQAPARLHWLATLL-----------------MDALKRHHGAAQVTNVD 269 L + L+ + L L LL D L ++ Sbjct: 247 HYIGKLASTLHEKNVSGALETLNELLQQGKDPAKLIEDMIFYFRDMLLYQTAPDLEGVLE 306 Query: 270 VPGLVAE---LANHLSPSRLQAILGDVCHIREQLM 301 + E L+ + S L ++ + +++ Sbjct: 307 KVKVDEEFQTLSRQIPASDLYEMIDILNKSHQEMK 341 >UniRef50_A6LMU3 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LMU3_THEM4 Length = 460 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 120/302 (39%), Gaps = 23/302 (7%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 V S + HA + G G + L++ L C+ PQ + C C C + G Sbjct: 26 FVNSLKNKEISHAYIFAGPRGTGKTTVARILAKSLNCENPQEIEPCNMCNACISIDKGNF 85 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 D L + G+D +R++ E +N H G KV + +A +LT A NALLKTLE Sbjct: 86 MDVLEL---DAASNRGIDEIRKIRETVNYHTAQGKYKVYIIDEAHMLTKEAFNALLKTLE 142 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REVTMSQDALL 188 EPP+ F LAT PE++ T+ SRC++ + + L + +S +A++ Sbjct: 143 EPPSNVVFILATTNPEKIPQTIISRCQVIDFKNISNKDIIKRLEFVCENEGIKISHEAIV 202 Query: 189 AALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPAR 244 + + G AL + + + + +P LL L + + Sbjct: 203 EISKRANGGLRDALTILEQVINSAGKDIKIEDVRETLGLIPDTIIEKLLENLENNDIKST 262 Query: 245 LHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQ------AILGDVCHIRE 298 L L+D + ++ + L + + + IL D+ + E Sbjct: 263 LK-----LIDEVYYSGKNLEIFLYQTIEKLISLVEENNHNYIHFLKPISEILKDIKYSEE 317 Query: 299 QL 300 ++ Sbjct: 318 KI 319 >UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=Peptococcaceae RepID=A5D6B1_PELTS Length = 558 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 77/347 (22%), Positives = 124/347 (35%), Gaps = 40/347 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P + L + +AGR HA + G G L++ L C +G Sbjct: 10 WRPRTFGEIIGQEHITRTLKNAVEAGRVGHAYIFCGARGTGKTTAAKVLAKALNCTGREG 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G D + + G+D +R++ EK+ G +V + Sbjct: 70 AEPCNRCESCRAVNEGISVDVIEI---DAASNRGIDEIRDLREKIRFAPAAGRYRVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP LAT EP R+ T+ SRC+ + Sbjct: 127 EVHMLTSEAFNALLKTLEEPPRHAVLILATTEPHRVPLTILSRCQRFDFRRIIPADIIKR 186 Query: 176 LSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDN----------------WQARE 214 L + + ++AL R + G AL++ R Sbjct: 187 LKEVAAGARLEVEEEALRLIARAAEGGLRDALSILDQAAAFGGMKVTEAGVHQILGTVRT 246 Query: 215 TLCQALAYSVPSGD---WYSLLAALNHEQAPARLH--WLATLLMDALKRHHGAAQVTNVD 269 +A + +G+ L++ L E RL LA L L Sbjct: 247 DALDRMAGCLAAGEAGRALRLVSELAGEGKDLRLFARELAGYLRALLLEKISPGTPAGEA 306 Query: 270 VPGL--VAELANHLSPSRLQAILGDVCHIREQLM--SVTGINRELLI 312 +A A S + L + + + + ++ GI EL + Sbjct: 307 WGDTARMAAQAAEFSEAGLVRAVEIIARAEQDMKWSAMPGIVLELAL 353 >UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKH0_FIBSS Length = 575 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 77/340 (22%), Positives = 127/340 (37%), Gaps = 23/340 (6%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + Q GR HHA L G+G L+R L C+ Sbjct: 9 KWRPQSFSDMVGQEHIAKTLENAIQGGRLHHAFLFTGTRGVGKTTSARILARTLNCKGSD 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D Y + + VD +R+V E++ +G K+ + Sbjct: 69 PLHPCGECDSCKDIAGGNPMDVYEI---DAASNTSVDNIRDVIERVQYPPVIGKYKIFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPPA F AT E ++ T+ SR + + Sbjct: 126 DEVHMLSTGAFNALLKTLEEPPAHVIFIFATTEVNKVPQTILSRVQRFDFKRLTVDQIRS 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 L + + +AL + GS L F + SV Sbjct: 186 RLRYICEQEGIKATDEALDIFAEKADGSMRDGLTYFDQAYAFTGNEMTAESVRSVLGIPP 245 Query: 230 YSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVD-----VPGLVAELANHLSPS 284 L +L + ++ DA+K G + +D + L+ + +P Sbjct: 246 VELFFSLIQSIENHDIKGCFRMVDDAVKI--GIEFIPLLDGFGKFLRNLLYARLDAFTPD 303 Query: 285 RLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 L + S+T + L I+ +L+ ++ L+ Sbjct: 304 ALNITEELYTKYKSCAQSLTNGDI-LRISKMLIDLQGTLR 342 >UniRef50_A9HZ16 DNA polymerase III subunit Tau n=6 Tax=Bordetella RepID=A9HZ16_BORPD Length = 736 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 85/333 (25%), Positives = 124/333 (37%), Gaps = 37/333 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + + R HHA L G+G L L++ L C+ Sbjct: 36 KWRPRSFDTLVGQDHVVRALTHALDSQRLHHAWLFTGTRGVGKTTLSRILAKSLNCETGI 95 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG CR C + AG DY L + GV+ + ++ E+ G KV + Sbjct: 96 TSKPCGQCRACTEIDAGRFVDYLEL---DAASNRGVEEMTQLLEQAVYAPGAGRYKVYMI 152 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NA+LKTLEEPP F LAT +P+++ T+ SRC L P V Sbjct: 153 DEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPPDAIVG 212 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L V AL + + GS AL+L E + + ++ Sbjct: 213 HLQAVLGDEAVACELPALRLIAQAAGGSMRDALSLTDQAIAYSAGNLTEDAVRGMLGTID 272 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMD--------ALKRHHGAAQVTN 267 LL AL A L L L D A+++ A + Sbjct: 273 QRHLVRLLEALPAGDATGVLAVADELSTRGLSYAGALADLAVLLSRVAIEQRVPGATPAD 332 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQL 300 + ++ LA L P +Q H R +L Sbjct: 333 DPLAADISRLAGVLHPDAVQLFYSVAVHSRGEL 365 >UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URG8_AKKM8 Length = 732 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 75/354 (21%), Positives = 140/354 (39%), Gaps = 43/354 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D L + + R HA L G G + ++ L C Sbjct: 9 KYRPLTFDDVLGQDHVVRTLKNAIEHNRLAHAYLFVGPRGTGKTSTARIFAKALNCSGGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 H C+ + G D + G + G+D +R++ + + G ++V++ Sbjct: 69 KVDFDPHEDICEEIAEGRSLDVLEI---DGASNRGIDHIRDLRDNVRFAPSRGNFRIVYI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT + NALLKTLEEPP F AT EP ++L T+ SRC+ L P P + Sbjct: 126 DEVHMLTKESFNALLKTLEEPPPHVKFIFATTEPHKILPTILSRCQRFDLRPIPSEIIAE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ------GDNWQA----------- 212 L + V++S++A A +++ G A ++ GD+ + Sbjct: 186 HLLHIASAEGVSLSREAAFAVAKVADGGMRDAQSMLDQLVSFCGDHIEEQQVLHIFGITS 245 Query: 213 RETLCQALAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHHGAAQVTN 267 RET+ ALA + + + SLL L+ + L + + + + L + Sbjct: 246 RETVAHALA-LILNKELPSLLHLLHEQAEAGRDMSQFLSEIISAVREILVSKVDPEASFD 304 Query: 268 V---DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 +AEL ++ ++ + +++ T N+ L + L++ Sbjct: 305 SLPESSKEELAELVKRTHTDKILRLVEVLAETEDKMRWST--NKRLHLEMGLIK 356 >UniRef50_C2D9N9 DNA polymerase III gamma and tau subunits n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9N9_9ACTN Length = 742 Score = 274 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 102/255 (40%), Gaps = 13/255 (5%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 L + + HA L G G + ++ LLC PQ CG C C+ Sbjct: 19 QTHVVSTLQNAVLEHKIGHAYLFCGPRGTGKTTMARLFAKALLCTSPQNGLPCGVCETCK 78 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAA 125 + G HPD + L + GVD VRE + +++N G K+ + + +LT +A Sbjct: 79 NIAQGIHPDVFEL---DAASRTGVDNVREEIIDRVNYAPLKGAYKIYIIDEVHMLTASAF 135 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REV 180 NALLKTLEEPP+ F L T EP ++LAT+ SR L Sbjct: 136 NALLKTLEEPPSHVVFILCTTEPHKILATILSRVMRFDFHRIKSDEMFVHLQKVCTLEHF 195 Query: 181 TMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPSGDWYSLLAAL 236 + +AL + + G AL+ + + L + + + + +L+ +L Sbjct: 196 SADDEALKLIVEHAQGGMRDALSSLEQISVFGKGVISKRLVEDMLGATSQTNLTALVQSL 255 Query: 237 NHEQAPARLHWLATL 251 +A+L Sbjct: 256 ALRDTKRLFEEIASL 270 >UniRef50_B1WS93 DNA polymerase III gamma and tau subunits n=6 Tax=Cyanobacteria RepID=B1WS93_CYAA5 Length = 683 Score = 273 bits (699), Expect = 5e-72, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 108/268 (40%), Gaps = 20/268 (7%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ--Q 52 ++ P D L + + R A L G G + L++ L C + Sbjct: 10 KYRPQTFADLVGQEAIATTLSNAIASQRIAPAYLFTGPRGTGKTSSARILAKSLNCLAVK 69 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + G+ D + + GVD +RE+ E+ KV Sbjct: 70 VPTASPCGQCEVCRAIARGSALDVIEI---DAASNTGVDNIREIIERSQFAPVQCRYKVY 126 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ AA NALLKTLEEPP F LAT +P+R+L T+ SRC+ P + Sbjct: 127 VIDECHMLSVAAFNALLKTLEEPPERVIFVLATTDPQRVLPTIISRCQRFDYRRIPLEAM 186 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ---ALAYSV 224 V L + + +AL +++ G A +L + + + L +V Sbjct: 187 VEHLTIIAQKENIEIEAEALTLVAQIANGGLRDAESLLDQLSLLSGGITPEKVWDLVGAV 246 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLL 252 P D SLL A+N + L+ Sbjct: 247 PERDLLSLLKAINSNNPELVIESCRKLM 274 >UniRef50_C0GUE6 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUE6_9DELT Length = 561 Score = 273 bits (699), Expect = 5e-72, Method: Composition-based stats. Identities = 82/353 (23%), Positives = 139/353 (39%), Gaps = 37/353 (10%) Query: 14 LVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 L + R HA L G+G L LS+ + C + C C C+ + G Sbjct: 28 LSRAAGQDRPSHAYLFSGTRGVGKTTLARILSKAINCYNGPAPEPCNQCSSCEQITRGAS 87 Query: 74 PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLE 133 PD + + + GVD VR++ E + G KVV + +A +L+ +A NALLKTLE Sbjct: 88 PDVWEI---DAASHTGVDNVRKLREDVAYSPMSGRYKVVIIDEAHMLSTSAFNALLKTLE 144 Query: 134 EPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALL 188 EPPA F +AT PE+ AT+ SRC+ + L + V+ ++A+ Sbjct: 145 EPPAHCVFIMATTAPEKFPATVISRCQHYVFKRLTHGELFAHLCFVLDTEGVSYEKEAVH 204 Query: 189 AALRLSAGSPGAALA-----LFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHE--QA 241 R +GS +++ L GD + + L + + L+ + + Sbjct: 205 LLTRRGSGSVRDSMSMLGQVLALGDEGLKTADVRRVLGLADQELFLRLMQHILDQDLVRL 264 Query: 242 PARLHWLATLLMDA---------------LKRHHGAAQVTNVDVP----GLVAELANHLS 282 +++L +D L G +D+P E+A + Sbjct: 265 HEMVNYLLEQGLDLGFFLQEMAQCWRNMFLLSQGGQEAGKVLDLPAEEVEKWREMAGMFA 324 Query: 283 PSRLQAILGDVCHIREQLMS--VTGINRELLITDLLLRIEHYLQPGVVLPVPH 333 S + A V R+ ++ GI+ EL++ + L + + P P Sbjct: 325 ASTIHAGWQMVLESRKSILGSYEPGISLELMLYN-LAYLPELIPVSGYAPEPQ 376 >UniRef50_C4XU00 DNA polymerase III gamma and tau subunit n=2 Tax=Desulfovibrio RepID=C4XU00_DESMR Length = 654 Score = 273 bits (699), Expect = 5e-72, Method: Composition-based stats. Identities = 79/339 (23%), Positives = 123/339 (36%), Gaps = 41/339 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D L + R A L G+G L L++ L C+ Sbjct: 9 KYRPQRFADVAGQDAVKRILSRAAAEDRIAPAYLFSGTRGVGKTTLARVLAKALNCETAP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ + AG PD + VD R + E + KV + Sbjct: 69 TGEPCNVCSQCRQITAGVSPDVIEI---DAATHGKVDDARRLKEDVGYAPLNSRYKVFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT AA NALLKTLEEPP F LAT EP + AT+ SRC+ + + Sbjct: 126 DEAHMLTTAAFNALLKTLEEPPGRVTFILATTEPHKFPATIISRCQHYLFKRLAQSELEA 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 LS V A+ R AGS +++L + E + + Sbjct: 186 HLSSVLMREAVPYEAKAVSLIARRGAGSVRDSMSLLAQVLALGGAELTEADARGVLGLAG 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLL---MDA---------------LKRHHGAAQVTN 267 ++ L+ A+ E PA + L +L +D L R G + Sbjct: 246 QEVFFGLIEAIRAEDGPAVVELLRQVLDKGLDIGFFLRELASMWRNLFLLRQAGERALPV 305 Query: 268 VDVPGLVA----ELANHLSPSRLQAILGDVCHIREQLMS 302 VD+P A A + + + A + ++ + Sbjct: 306 VDLPAEEAGEWLVWAGRIEAAHIHACWQMTLEGQRRVQT 344 >UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ85_9FIRM Length = 525 Score = 273 bits (699), Expect = 5e-72, Method: Composition-based stats. Identities = 71/253 (28%), Positives = 103/253 (40%), Gaps = 29/253 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + + R HA L G G + L++ + C++ Sbjct: 8 QWRPQFFADMVGQQHVARTLQNALEQDRLAHAYLFCGPRGTGKTSAAKILAKAINCEKGP 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ +QAG D + + G+D +RE+ EK KV V Sbjct: 68 SREPCNECAACRGIQAGRVMDVQEI---DAASNRGIDEIRELREKARYSPVEVRHKVYIV 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F LAT EP +L AT+ SRC+ Sbjct: 125 DEVHMLTQEAFNALLKTLEEPPGRVLFVLATTEPHKLPATIISRCQRLDFHLIGMTDIAE 184 Query: 175 WLSREVT-----MSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS---VPS 226 L V + DAL +AG AL+L + Q +AYS + Sbjct: 185 RLRSVVDDSGRSIQDDALYLIAEEAAGGLRDALSLLE-----------QIMAYSEGNISD 233 Query: 227 GDWYSLLAALNHE 239 D ++L A+ + Sbjct: 234 EDVLAVLGAVGRD 246 >UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragment) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CH16_9PLAN Length = 484 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 127/305 (41%), Gaps = 26/305 (8%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L + + R HA L G+G ++ L++ L C Q CG C CQ + G Sbjct: 31 QALQNAIRGDRVAHAYLFTGARGVGKTSMARILAKALNCPHTQDGIPCGECEVCQNIAVG 90 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 + D + G + G+D +R + +N + K+ + + +LT A NALLKT Sbjct: 91 SDVDVLEI---DGASNRGIDDIRSLRANVNVRSMRSKYKIYIIDEVHMLTKEAFNALLKT 147 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPP F T EP +L T+ SRC+ E L + +V+++ DA Sbjct: 148 LEEPPPNVKFIFCTTEPNKLPDTILSRCQRFDFGYIEENSICDRLKQIAEAEQVSVADDA 207 Query: 187 LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS---VPSGDWYSLLAALNHEQAPA 243 + R + GS + ++F Q L++ + + + +L + E+ Sbjct: 208 IQLVARRAGGSMRDSQSIFD-----------QLLSFGESHLTAESVHRILGTASDERLIE 256 Query: 244 RLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSV 303 + L D H AA V + V +L N+L + A + L+S+ Sbjct: 257 LIDALIEQKRDVALTHFDAALNAGVQLNEFVDQLLNYLRDLSVVAT----GASQVTLLSI 312 Query: 304 TGINR 308 + +NR Sbjct: 313 SEMNR 317 >UniRef50_Q2BG76 DNA polymerase III subunit delta n=1 Tax=Neptuniibacter caesariensis RepID=Q2BG76_9GAMM Length = 295 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 90/283 (31%), Positives = 141/283 (49%), Gaps = 3/283 (1%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPW + L ++ R HALLI + G+G + ++ LLCQQP+ K+CG C+ Sbjct: 8 YPWFAERNKHLAELHRQKRLPHALLIHGMQGIGKALFAKSFAQMLLCQQPESGKACGVCK 67 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 C+L AG+HPD + L PE+ L VD VR + E + A+ GG +VV + A + A Sbjct: 68 SCELNAAGSHPDLFILQPEEAGKQLKVDQVRALGEFIYSTAQQGGYRVVVIDPADSMNIA 127 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 +ANALLK LEEP ++T L T + ++L T++SRC+ P + A++WL E + Sbjct: 128 SANALLKMLEEPGSDTLLLLVTSKMGQVLPTIKSRCQHIECVTPDTEVAISWLMSEGDLD 187 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSV-PSGDWYSLLAALNHEQAP 242 ++ L ++ G+P ALA + + R L + LA + + A Sbjct: 188 EERARGVLTINRGAPKEALAYLNNNLGEDRAQLIRGLADILKQRRSPLEVAQAWQKLDLE 247 Query: 243 ARLHWLATLLMDALK--RHHGAAQVTNVDVPGLVAELANHLSP 283 L WL +LL D + V + D ++ +A L+P Sbjct: 248 LLLGWLYSLLTDIARGALCENDDSVRHEDARNMLNAVAKKLTP 290 >UniRef50_C4LG88 DNA polymerase III, gamma and tau subunit n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LG88_CORK4 Length = 990 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 83/363 (22%), Positives = 125/363 (34%), Gaps = 47/363 (12%) Query: 1 MRWYPWLRP-DFE----------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLL 49 M Y RP F L + AGR +HA L G G + L+R L Sbjct: 1 MALYRKYRPATFADVVGQEHVTVPLSRALDAGRINHAYLFSGPRGCGKTSSARILARSLN 60 Query: 50 CQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 C CG C C+ + G P + + GV+ +R++ ++ Sbjct: 61 CVHGPTSTPCGECESCRALAPGG-PGSLDVTELDAASHRGVEDMRDLRDRAIYAPAESRY 119 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 +V + +A ++T NALLK +EEPP F AT EPE++L T++SR + Sbjct: 120 RVFIIDEAHMITKEGFNALLKIVEEPPEHLVFIFATTEPEKVLTTIKSRTHQYPFRLLAP 179 Query: 170 QYAVTWLSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNWQARE---------- 214 L R +V + +R GSP +L++ A E Sbjct: 180 NDMRGLLERICSEEKVQVEDSVYPLVIRAGGGSPRDSLSVLDQLLAGADENGITYAHAAG 239 Query: 215 -------TLCQALAYSVPSGDWYSLLAA----LNHEQAPARLHW-LATLLMDALKRHHGA 262 L A SV + D L L+ P R L D L Sbjct: 240 VLGITDSALIDAAVESVANNDPAGLFTTINNVLDAGHDPRRFATDLVDRFRDLLVLQSIP 299 Query: 263 AQVTN------VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLL 316 +D +A+ A L P+ L V +L T + LL+ + Sbjct: 300 DAFDQGLVDAPLDQRETLADEAQSLGPATLTRCAAVVSDGLNELKGAT--SPRLLLEIMC 357 Query: 317 LRI 319 R+ Sbjct: 358 ARM 360 >UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAH1_DESAH Length = 590 Score = 273 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 69/309 (22%), Positives = 119/309 (38%), Gaps = 23/309 (7%) Query: 1 MRWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P + L + +GR HA+L+ G G + L++ + C+ Sbjct: 8 LKYRPQTFDEVVGQPHVTTTLKNAILSGRVPHAILLTGPRGTGKTTIARILAKAMNCETG 67 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 C C+ C + AG+ D + + G + VD VRE+ E + K+ Sbjct: 68 PTPTPCNICKTCTNITAGSAVDVFEI---DGASNNSVDQVRELRENVAYMPSSSKFKIYI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ AA NALLKTLEEPP F AT E ++ T+ SRC+ H L Sbjct: 125 IDEVHMLSMAAFNALLKTLEEPPDHVIFIFATTEVHKIPVTILSRCQRHDLGRISLAQIS 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGD 228 L + ++SQ++ + GS +L+L +T Q D Sbjct: 185 AHLMTLAAAEGFSISQESCDLLAGEADGSMRDSLSLLDRILGSQAQTSEQTSGPRAIDDD 244 Query: 229 WYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQA 288 +L L L DA+ ++ GA + VD + + L Sbjct: 245 --KILGTLGIIDKTLVFD-----LADAIIQNRGADIIDLVDRIHTLGLDLKRF-YASLIR 296 Query: 289 ILGDVCHIR 297 ++ ++ Sbjct: 297 HFRNLAVVK 305 >UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subunits n=3 Tax=Bacillus RepID=A8FAE4_BACP2 Length = 570 Score = 273 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 115/319 (36%), Gaps = 32/319 (10%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L + + HA L G G + ++ + C++ + C C C+ + G Sbjct: 26 KTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAKAVNCEKSPVSEPCNECDACKGITNG 85 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 + D + + GVD +R++ +K+ KV + + +L+ A NALLKT Sbjct: 86 SISDVIEI---DAASNNGVDEIRDIRDKVKFAPSAVTYKVYIIDEVHMLSIGAFNALLKT 142 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS-----QDA 186 LEEPPA F LAT EP ++ T+ SRC+ + V + + V + + Sbjct: 143 LEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITTKDIVGRMQKIVDAESLNVQEGS 202 Query: 187 LLAALRLSAGSPGAALALFQGD----------------NWQARETLCQALAYSVPSGDWY 230 L + G AL+L + LA ++ + Sbjct: 203 LEIIASAADGGMRDALSLLDQAISFSGEQLTIDDALLITGAVSQQFISQLAEAIFDQNIA 262 Query: 231 SLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE---LANHLS 282 L LN + A + + D L ++ + L++ ++ Sbjct: 263 VALDTLNELLQQGKDAAKLIEDMIFYFRDMLLYKTAPDLEGVLEKVKVDENFVTLSDRVT 322 Query: 283 PSRLQAILGDVCHIREQLM 301 P L + + +++ Sbjct: 323 PQFLYETIEVLNKSHQEMK 341 >UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacillales RepID=C2H810_ENTFC Length = 581 Score = 273 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 118/318 (37%), Gaps = 31/318 (9%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L + + + HA L G G + ++ + C + + C C C+ + AG Sbjct: 26 QTLKNAIVSHKTSHAYLFTGPRGTGKTSAAKIFAKAINCPNSKDGEPCNECEMCRSITAG 85 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 T D + + GV+ +R + ++ N KV + + +L+ A NALLKT Sbjct: 86 TQEDVIEI---DAASNNGVEEIRFIRDRANYAPTKAAYKVYIIDEVHMLSTGAFNALLKT 142 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEP F LAT EP ++ AT+ SR + V L + A Sbjct: 143 LEEPKESVIFILATTEPHKIPATIISRTQRFDFKRINTADIVEHLEFILKESTINYEPAA 202 Query: 187 LLAALRLSAGSPGAALALFQG--DNWQARETLCQAL--AYSVPSGDWYSLLAALNHEQAP 242 L R + G AL++ + TL A+ S+ S L+A ++ P Sbjct: 203 LNVIARSAEGGMRDALSILDQAISFSEGTITLDDAMQVTGSLTDEMMDSYLSACVKKEVP 262 Query: 243 ARLHWLATLL-----------------MDALKRHHGAAQV--TNVDVPGLVAELANHLSP 283 L L +L D L V + + ELA +S Sbjct: 263 EALEALNQILAAGKESRRFLEDMLQYCRDLLMYQQAPNLVEEQSSTIRSTFTELAQTVSA 322 Query: 284 SRLQAILGDVCHIREQLM 301 +L +++ + + ++ Sbjct: 323 DQLFSMIKILSDTQNEIR 340 >UniRef50_B6BKU4 DNA polymerase III gamma and tau subunits DnaX n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKU4_9PROT Length = 585 Score = 273 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 67/326 (20%), Positives = 122/326 (37%), Gaps = 25/326 (7%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L + + R HA L L G G + ++ L+C+Q H+ CG C+ C+L Sbjct: 28 QTLSLALDSNRLSHAYLFSGLRGSGKTSTARIFAKALICEQGMSHEPCGVCQNCKLAVEN 87 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 H D + ++ +D +R++ E+ K+ + + +LT A NALLKT Sbjct: 88 RHMDIVEM---DAASSRKIDDIRDLIEQTKYRPASARFKIFIIDEVHMLTKEAFNALLKT 144 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REVTMSQDA 186 LEEPPA F LAT +P +L AT+ SR + + + L+ E+ DA Sbjct: 145 LEEPPAYVKFILATTDPLKLPATILSRTQHFRFKSIATKKIIDHLAHILNLEEIKYETDA 204 Query: 187 LLAALRLSAGSPGAALALFQGDNWQARE----TLCQALAYSVPSGDWYSLLAALNHEQAP 242 L R GS L L ++ + V L +A+ + Sbjct: 205 LEILARSGNGSLRDTLTLLDQAIIYSKNHVDVNTVTDMLGLVDPKFIMDLFSAVFAKDYA 264 Query: 243 ARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE----LANHLSPSRLQAILGDVCHIRE 298 + + + L A++ ++ + E S L + + Sbjct: 265 SLVQYTKIL-------EDYEAEMVVDELIAYLKERMYNQDALFSTLVLDRFFRILSDSKS 317 Query: 299 QLMSVTGINRELLITDLLLRIEHYLQ 324 + +++ + ++ L+ Sbjct: 318 LF--SINADGSFVLSLIFFKMVEALR 341 >UniRef50_C3XBH9 DNA polymerase III subunit gamma n=2 Tax=Oxalobacter formigenes RepID=C3XBH9_OXAFO Length = 604 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 124/337 (36%), Gaps = 37/337 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + ++ R HHA L G+G L L++ L C++ Sbjct: 9 KYRPKNFENIVGQDHVVRALSHALESQRLHHAYLFTGTRGIGKTTLSRILAKSLNCEKGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + + DY + + G+ + ++ E+ KV + Sbjct: 69 TASPCGICEACKAIDSDRFVDYVEM---DAASNRGIADMLQLLEQAVYAPTAARFKVYMI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NA+LKTLEEPP F LAT +P+++ T+ SRC L P + V Sbjct: 126 DEVHMLTSQAFNAMLKTLEEPPEYVKFILATTDPQKIPVTVLSRCLQFNLKQMPVSHIVD 185 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 LSR + + AL + + GS AL+L + Q + ++ Sbjct: 186 HLSRILELENIPFEKPALRLLAQGAQGSMRDALSLADQAIAYTAGHVTDEAVQDMLGALD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDA-LKRHHGAAQVTNVDVP--- 271 LL L + + L + L D L A + D P Sbjct: 246 QTYLIRLLDHLANRDGTSLLKVADEMAFRSLSYSTALQDLGLLLQKIAMIQSVPDYPLDD 305 Query: 272 ----GLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 ++ LA SP LQ H R +L Sbjct: 306 IADSDNLSRLAAIFSPEELQLYYQIAIHGRNELGLAP 342 >UniRef50_Q2RZH6 DNA polymerase III, subunits gamma and tau, putative n=2 Tax=Rhodothermaceae RepID=Q2RZH6_SALRD Length = 728 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 82/362 (22%), Positives = 134/362 (37%), Gaps = 46/362 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P L + E L + + R HA L G+G L++ + C+ P Sbjct: 12 KYRPSLFTEVVAQEHVTETLKNAIRMERLAHAYLFSGPRGVGKTTAARILAKAINCETPR 71 Query: 54 ----QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 G + C C C+ +AG + + + + VD +RE+ EK+ + Sbjct: 72 EEREDGAEPCCECDSCESFEAGRSLNVFEM---DAASNNKVDDIRELREKVRIPPQGDQK 128 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 KV + + +L+ A NALLKTLEEPPA F AT EP ++L T+ SRC+ P Sbjct: 129 KVYILDEVHMLSKQAFNALLKTLEEPPAHALFIFATTEPHKVLPTILSRCQRFDFRRIPV 188 Query: 170 QYAVTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQ------------GDNWQA 212 V L V +++L+ R G+ AL+ F G+ QA Sbjct: 189 PEIVQRLREICETEGVEADEESLMLLARKGNGALRDALSAFDQALSLCGATLEYGELTQA 248 Query: 213 RETLCQALAYSVPS----GDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHH--- 260 + Q L + + D ++ + H L LA L + L H Sbjct: 249 LGVVDQDLYFRLTDHVAAQDTAGMIELVRHVVRSGYDLQEMLVGLAEHLRNLLVAHSLGG 308 Query: 261 GAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIE 320 A + A+ A + L +L + + L + LL++ Sbjct: 309 EALEEVAESTRTRYADEAERFDEADLLRLLTMAADTEDDIKQSPQ--PRLTLETTLLKMA 366 Query: 321 HY 322 Sbjct: 367 QL 368 >UniRef50_B2A325 DNA-directed DNA polymerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A325_NATTJ Length = 320 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 19/317 (5%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-PQGHKSCGHCRGC 65 + L+ +G HA + G G +L + LLC+ + CG C C Sbjct: 21 QEKIVKNLLRQLTSGNTGHAYMFVGPEGQGKGSLARIFAAGLLCESVDENSGPCGICYSC 80 Query: 66 QLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAA 125 ++ HPD T+ E ++ ++ VR+V + +N K+ + A +T A Sbjct: 81 SKLKKSIHPDLVTIGSE--SKSIKIEEVRKVKQYINYRPTDSKKKIYLIESAENMTREGA 138 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQD 185 N++LK LEEPP F L E ER+L T+ SRC++H P E+ LS SQ+ Sbjct: 139 NSILKMLEEPPEYVVFLLTVNELERMLPTVISRCQIHQFLPLTEEQLYKALSNRTHASQE 198 Query: 186 ALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARL 245 L A+ LS G G LA+ Q + +Y +S + P L Sbjct: 199 QLELAVSLSGGMIGRGLAILQDE------------SYYDMIKKAHSFVEKFEKLTLPELL 246 Query: 246 HWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTG 305 W + D++ ++ N+ ++E S ++L I+ + + QL+ T Sbjct: 247 DWAEKI--DSMDNCEEFLELLNIVFKQKLSENQTSDSINKLARIMEIILETKGQLL--TN 302 Query: 306 INRELLITDLLLRIEHY 322 +NR L + ++++I+ Sbjct: 303 VNRLLALEAMMVKIKEV 319 >UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZU40_DESOH Length = 570 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 83/373 (22%), Positives = 134/373 (35%), Gaps = 51/373 (13%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + +GR HA+L G G + L++ + C++ Sbjct: 9 KYRPQTFEEVVEQQQVTRTLTNAIASGRVAHAILFTGPRGTGKTTIARILAKAMNCEKGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C CR C + +G D + + G + VD VRE+ + K+ + Sbjct: 69 TPTPCCACRSCLEIASGNATDVFEI---DGASNNSVDQVRELRGNVKFMPAHSPYKIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPPA FF AT EP ++ T+ SRC+ H L+ V Sbjct: 126 DEVHMLSGPAFNALLKTLEEPPAHVMFFFATTEPHKIPVTILSRCQRHDLSFVGIDPLVA 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQAR---------------- 213 L + + + +L + GS +L+L A+ Sbjct: 186 HLETLCEKENIPIEKKSLELIAHEAGGSVRDSLSLLDQVMSSAQGPVSHEMVLEALGIID 245 Query: 214 ETLCQALAYSVPSGDWYSLLAALN------HEQAPARLHWLATLLMDALKRHHGAAQVTN 267 + L+ +V +GD L L+ H+ L D L G Sbjct: 246 REVIFGLSGAVLAGDMTGALDILDTVYRGGHDIKRFYAEMLGHF-RDLLMVKLGVRAERL 304 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHI------REQLMSVTGINRELLITDLLLRIEH 321 +PG E + + L + R + S I E++ LL Sbjct: 305 ASLPGWAVEKMQAQTRDVTELFLSQAMALMLAEEDRVRFSSQPKIAVEMVFVKLL----- 359 Query: 322 YLQPGVVLPVPHL 334 VLP+ L Sbjct: 360 --HTKPVLPIDTL 370 >UniRef50_C7H4D6 DNA polymerase III, gamma/tau subunit n=3 Tax=Ruminococcaceae RepID=C7H4D6_9FIRM Length = 625 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 15/217 (6%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P R L GR HA L + G G ++ + C PQ Sbjct: 15 KWRPQRFEDVVAQRGIVTALRNQIATGRVGHAYLFTGVRGTGKTTCAKIFAKAVNCLHPQ 74 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G+ D + + GVD +R++ ++ KV + Sbjct: 75 NGDPCGECEICRGIDNGSILDVVEM---DAASNNGVDDIRDLRDETAYTPSACHYKVYII 131 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPPA F LAT E +++ AT+ SRC+ + + Sbjct: 132 DEVHMLSTAAFNALLKTLEEPPAHVIFILATTEIQKVPATILSRCQRYDFTRIGPEDIAQ 191 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ 206 + + +S + RL+ G+ AL++ Sbjct: 192 RVEYIAGQEGLELSGEGAELISRLADGAMRDALSILD 228 >UniRef50_C4L8D9 DNA polymerase III, delta prime subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8D9_TOLAT Length = 319 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 96/279 (34%), Positives = 138/279 (49%), Gaps = 5/279 (1%) Query: 4 YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCR 63 YPWL P + + + + R HA L+ G+G AL + LC+QPQ + CG C Sbjct: 2 YPWLMPYWLRFQQVFASKRLPHAFLLVGPAGIGKSALAVQWASLFLCEQPQQNTPCGKCH 61 Query: 64 GCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123 CQL THPD++ + K+ +GVD +R+++ +L +LG KV + A +T+A Sbjct: 62 ACQLSGKQTHPDWHVYGADDAKS-IGVDIIRQLSAQLMNSPQLGRGKVAVILQAERMTEA 120 Query: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183 A NALLKTLEEPP + L +LL T+ SRC++ L EQ A+TWL +++ Sbjct: 121 AENALLKTLEEPPGNSLLILQAESAMKLLPTIVSRCQVWTLQA-EEQQALTWLQQQLP-G 178 Query: 184 QDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPA 243 ++ A LRL+ G+P L Q R + AL S L P Sbjct: 179 REITPALLRLNQGAPLRTLEYLNEGGEQQRLAVINALDAYRQQPWTISSLTKCWVSAMPV 238 Query: 244 RLHWLATLLMDALKRHHGA--AQVTNVDVPGLVAELANH 280 WL+ LL+DALK G Q+ D P L++ LA Sbjct: 239 TFEWLSRLLLDALKLQQGVVMQQLPFADHPALLSFLAQR 277 >UniRef50_A0LEK6 DNA polymerase III, delta prime subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LEK6_SYNFM Length = 335 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 87/335 (25%), Positives = 141/335 (42%), Gaps = 13/335 (3%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG 64 P L +AG HA+L + G+G + L++ + C +P+ +SC C Sbjct: 7 PGQERTKRLLKRMARAGTLPHAVLFSGMAGVGKLRVARELAKLVNCLEPRDDESCDRCIS 66 Query: 65 CQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA 124 C+ + G HPD + + E + +D +RE+ E++ G +VV + +A L D + Sbjct: 67 CRKIDEGHHPDLFVIRSEG--TFIKLDRIRELRERVRFRPFEGRFRVVIIENAQHLHDES 124 Query: 125 ANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQ 184 NALLK LEEPP F L EP+ LL T+ SRC L P ++ L+ + + + Sbjct: 125 GNALLKVLEEPPRANLFLLTAIEPQMLLPTIVSRCSHLRLQPLEDEVIAGELAASLKIPE 184 Query: 185 DALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSG--DWYSLLAALN--HEQ 240 RLS GS A L + ++ + + + L S SG D ++ E Sbjct: 185 AQARELTRLSGGSLDRAQWLAREEHLSHWKEIVENLRKSERSGTADVLAMAGRWAQQKED 244 Query: 241 APARLHWLATLLMDAL--KRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIRE 298 L + + D L + G Q D P V +SP L + V Sbjct: 245 LEQDLECVKLWVRDLLLSRVIDGYRQAFEPDDPCAVC--GGEVSPDSLLTLYDRVEESIG 302 Query: 299 QLMSVTGINRELLITDLLLRIEHYLQPGVV-LPVP 332 +L N++L++ + L I+ L P+P Sbjct: 303 RLRG--NANKQLVMESICLNIKDVLYGKGCWNPLP 335 >UniRef50_B6BTP5 DNA polymerase subunits gamma and tau n=1 Tax=beta proteobacterium KB13 RepID=B6BTP5_9PROT Length = 512 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 113/318 (35%), Gaps = 26/318 (8%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P E L S R HHA L+ G+G + ++ L C Sbjct: 9 KWRPKNFETIVGQEFIVEALKNSILGDRLHHAYLLSGTRGVGKTTIARIFAKCLNCHTGS 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C + D L + VD +RE+ E N K+ + Sbjct: 69 NPTPCCECSSCVEIDQSKSIDVIEL---DAASNTQVDNMRELLENANYQPTSSKYKIFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NA+LKTLEEPP F LAT +PE++ T+ SRC L Sbjct: 126 DEVHMLSKSSFNAMLKTLEEPPEHVIFILATTDPEKIPVTVISRCLHFNLMQMTNDEISG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQALAYSV 224 L + +A+ + + GS AL+L + + E L Q L Sbjct: 186 QLQNIFYEENIAYEDEAINMISKHADGSMRDALSLADRVINYTNGNVSLEKLTQIL-GIT 244 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPS 284 G LL + L L++ LK HH + + + + ++ + Sbjct: 245 SDGVIDELLTNILDNNKQKVLD-----LLNKLKEHHISYESALKVLSEKIFAISEEQTFG 299 Query: 285 RLQAILGDVCHIREQLMS 302 + + QL+ Sbjct: 300 GGNKSIQRGKQVSLQLLQ 317 >UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUL1_HALO1 Length = 649 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 128/320 (40%), Gaps = 34/320 (10%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 L ++ R HHA L G+G L + L C++ + CG C C+ + G Sbjct: 26 RTLANAFAKDRVHHAFLFCGPRGVGKTTAARILGKALNCERGPTAEPCGSCVACETITNG 85 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 T DY+ + G + G+DA+RE+TE + + KV + + +LT A NALLKT Sbjct: 86 TAVDYFEM---DGASNRGIDAIRELTEAVRYQPAVLRKKVYVIDEVHMLTTEAFNALLKT 142 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPP F LAT EP ++ T+ SRC+ + P + L + E+ + A Sbjct: 143 LEEPPPHVSFVLATTEPHKVPNTILSRCQRYDFKLVPAPKLIEHLRRIFAAEEIEVDSGA 202 Query: 187 LLAALRLSAGSPGAALALF-------------QGDNWQ----ARETLCQALAYSVPSGDW 229 + +R S GS +L+L + D + A +L + L ++ GD Sbjct: 203 ISLIVRESGGSVRDSLSLCDQVISYVGTSNIGESDVAEVLGVADRSLTRTLVSALAEGDA 262 Query: 230 YSLLAALNHEQAPARLHW-----LATLLMDALKRHHGAAQVTNVD----VPGLVAELANH 280 S L A+ A + L D +D + E A Sbjct: 263 KSALEAVEAADARGVDEVQLARAIVRYLRDLAVMQVAPEAEGLIDGSEEEAAELREHAGR 322 Query: 281 LSPSRLQAILGDVCHIREQL 300 LS R+ + + L Sbjct: 323 LSRERVTQMFDRMVQACNDL 342 >UniRef50_C6NZM0 DNA polymerase III, delta prime subunit n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZM0_9PROT Length = 335 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 133/340 (39%), Gaps = 24/340 (7%) Query: 1 MR-WYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKS 58 M+ YPW ++ L R HA+L++ G+G L ++ LLC++P + Sbjct: 1 MKPLYPWQSESWQALQGL--RNRLPHAVLLKGAQGIGKLDLAMNFAQSLLCEKPNADGTA 58 Query: 59 CGHCRGCQLMQAGTHPDYYTLAPE---------------KGKNTLGVDAVREVTEKLNEH 103 C C C + HPD+ + P+ K + VD +R ++ N Sbjct: 59 CHTCNSCHWFEQENHPDFRLVQPDALSSADEGDEKQGGKKPSREISVDQIRNLSNFANLS 118 Query: 104 ARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHY 163 A GG +VV + A + + AAN+LLKTLEEP F L + +P++LL T+ SRC Sbjct: 119 AHCGGYRVVLIHPAESMNNNAANSLLKTLEEPTDNLLFLLISHKPQQLLPTILSRCLGFT 178 Query: 164 LAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS 223 ++ P + WL ++ + LA S +P AL + ++ Sbjct: 179 VSTPTRELGTAWLEQQGVKNPAHALAQ---SGFAPLQALGWSESGEGAEERSILLNAIRQ 235 Query: 224 VPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSP 283 D +L L +H L D + G + +LAN +S Sbjct: 236 PSKMDALALADGLQRSAPIYSIHCLQQWCHDLTSAKLAGMVRYFPEQAGEITKLANGVSS 295 Query: 284 SRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 L ++ R + +N +L + LLL Sbjct: 296 DALLRFQKELLEARRA--AYHPLNPKLFLESLLLSYRQLF 333 >UniRef50_A5VIC2 DNA polymerase III, subunits gamma and tau n=39 Tax=Lactobacillales RepID=A5VIC2_LACRD Length = 611 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 71/369 (19%), Positives = 132/369 (35%), Gaps = 43/369 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P D L + + HA L G G + ++ + C + Sbjct: 10 WRPQRFDDLVGQQIVTRTLKNAIITHQISHAYLFAGPRGTGKTSAAKIFAKAVNCHHSKD 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G D + + GV+ +R++ +K KV + Sbjct: 70 GEPCNECEICKAITNGQLNDVIEI---DAASNNGVEEIRDIRDKAKYAPTQADYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPPA F LAT EP ++ T+ SR + + A Sbjct: 127 EVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPLTIISRVQRFDFRRISAEDAFNR 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQG--DNWQARETLCQAL--AYSVPS 226 + ++VT + AL + G AL++ L AL SV Sbjct: 187 MKYILDQKKVTYDEKALWVIANAAEGGMRDALSILDQVLSFSDNEVKLDDALLVTGSVTK 246 Query: 227 GDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 ++ + + L + + D L + + +V+ Sbjct: 247 QLLKKYFLEISKHEGATALDTMKDILDEGKDGQRFIEDLISFIRDILLYQE-SPSLISVE 305 Query: 270 VPGLVA----ELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 GL E+ S + L ++ ++ +I+E++ T ++ + L +++ Sbjct: 306 STGLKQEDFEEIVQLASSATLYRMIDELNNIQEEMRFTTH--PDVYLEVLTIKLAQIEPQ 363 Query: 326 GVVLPVPHL 334 + P + Sbjct: 364 KNLQSAPAV 372 >UniRef50_UPI0001BC5C50 DNA polymerase III subunits gamma and tau n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC5C50 Length = 468 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 111/283 (39%), Gaps = 26/283 (9%) Query: 8 RPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP-QGHKSCGHCRGCQ 66 + L + + + A L G+G + +++ + C +P + ++CG C C Sbjct: 21 QEIVRALKNALKNNQLSQAYLFTGPRGVGKTTIARLIAKSVNCLEPKEDGEACGVCENCT 80 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 Q G+ D + + G+D +R + EK+N G KV + + +LT A N Sbjct: 81 SFQEGSFLDLVEI---DAASNRGIDEIRLLKEKINYQPSQGKKKVYIIDEVHMLTKEAFN 137 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REVT 181 ALLKTLEEPPA F LAT EP+++L T+ SRC+ + Q L + Sbjct: 138 ALLKTLEEPPAHVIFILATTEPDKILPTIISRCQRYDFKTLSLQDMGNQLQYILSRENLE 197 Query: 182 MSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQALAYSVPSGDWYSLLAAL 236 M ++ S GS A+++ + + + + P L L Sbjct: 198 MEEEVKELIYEASGGSMRDAISVLERLIVSSSERKISLEESEKILGMTPIQKMEQFLHCL 257 Query: 237 NHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELAN 279 E+ L L L +VD+ + + A Sbjct: 258 LQEEKKTILRELDELW------------FQSVDMEAFLKDFAK 288 >UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 Tax=Thermoanaerobacterales RepID=C6PF43_CLOTS Length = 533 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 66/362 (18%), Positives = 138/362 (38%), Gaps = 46/362 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + GR HA L G G ++ ++ + C Sbjct: 8 KYRPRNFSEVLGQNHIVRTLKNQIKTGRIGHAYLFCGTRGTGKTSVAKIFAKAVNCPNSV 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C+ C+ + D + + VD VRE+ + + + KV + Sbjct: 68 EGEPCNRCQICESANNNSLIDIIEI---DAASNNSVDDVRELRDNIIYAPSICKYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NALLKTLEEPP+ F LAT EP ++ AT+ SRC+ P + Sbjct: 125 DEVHMLSGSAFNALLKTLEEPPSHAIFILATTEPNKIPATILSRCQRFDFKRIPSKVISQ 184 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 + + + + A+ R GS A+++ + ++ + +C L +V Sbjct: 185 NIGKIAKDSNINIENRAIAMIARHGNGSMRDAISILEQCVSYNDVLTYDDVCDIL-GTVN 243 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRH---HGAAQV 265 Y+L+ +N A ++ + + L D + + ++ Sbjct: 244 DDTLYTLVKRINDRNAKEVINQIDKLMLYGIDVSNLIKAMLSFLRDIVIYKTCGTESEEI 303 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 ++ + + A+ S L + + ++ ++ + +L +L++ + P Sbjct: 304 LETEINDKILK-ASEFDMSFLSNAIEKLIDLQGKIRYAQ--SPRILFEITVLKL---MNP 357 Query: 326 GV 327 + Sbjct: 358 EI 359 >UniRef50_B5JVJ6 DNA polymerase III, delta prime subunit n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVJ6_9GAMM Length = 343 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 98/331 (29%), Positives = 146/331 (44%), Gaps = 15/331 (4%) Query: 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGC 65 W P ++ + + GR HALL+Q G+G L+R LLCQ G +CG C+ C Sbjct: 15 WHTPHWQSVAEQREQGRLPHALLLQGAAGVGKGLFARQLARGLLCQNAAGVAACGQCQDC 74 Query: 66 QLMQAGTHPDYYTLAPE-----KGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL 120 L G HPD++ + E K + VD +R +++ L+ + G KV + A + Sbjct: 75 HLSAIGQHPDWHEVTFERTKEGKLSREIRVDQIRALSDSLSLKSHSAGGKVAVIYPAHKM 134 Query: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180 AAN++LKTLEEP A+T+ L T P RLL T+RSRC+ P A WL+ Sbjct: 135 NVNAANSVLKTLEEPSADTFLLLVTDAPSRLLPTIRSRCQSIRFDVPSADQAEQWLAS-- 192 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARET-LCQALAYSVPSGDWYSLLAALNHE 239 ++ + A L +S G+P A + RET Q L + + AA Sbjct: 193 VVADQSPQALLAMSGGAPLLARQAAEEGWLDERETWFEQLLDIARGKLNPVDAAAAAAGM 252 Query: 240 QAPA--RLHWLATLLMDALKR-HHGAAQVTNVDVPGLVAELANH---LSPSRLQAILGDV 293 + A L W + D ++ V N D +A LA H SP L D+ Sbjct: 253 EVAASRVLEWTVSFCSDLIRLVQKVPDSVQNKDHQSTLAALAEHRFANSPQPLYRWCDDL 312 Query: 294 CHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 S + +N + L D+LL+ + Sbjct: 313 LKAGRYAESAS-LNAQQLFEDVLLQWQDIQH 342 >UniRef50_B3HUU9 DNA polymerase III subunit delta' n=6 Tax=Enterobacteriaceae RepID=B3HUU9_ECOLX Length = 278 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 238/243 (97%), Positives = 239/243 (98%), Gaps = 1/243 (0%) Query: 92 AVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERL 151 A+R VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERL Sbjct: 37 AIR-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERL 95 Query: 152 LATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQ 211 LATLRSRCRLHYLAPPPEQYAV WLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQ Sbjct: 96 LATLRSRCRLHYLAPPPEQYAVIWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQ 155 Query: 212 ARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVP 271 ARETLCQALAYSV SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVP Sbjct: 156 ARETLCQALAYSVQSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVP 215 Query: 272 GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPV 331 GLV ELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPV Sbjct: 216 GLVVELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPV 275 Query: 332 PHL 334 PHL Sbjct: 276 PHL 278 >UniRef50_A4BMM6 DNA polymerase III, delta prime subunit n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMM6_9GAMM Length = 357 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 104/325 (32%), Positives = 152/325 (46%), Gaps = 13/325 (4%) Query: 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGHCR 63 PW +P +++L A ++ GR HA+ + G+G L ++ LLC P+ CG CR Sbjct: 10 PWHQPVWDRLAACHRRGRVPHAIAVVGSAGLGKSRLAIRFAQALLCASPRSDGDGCGRCR 69 Query: 64 GCQLMQAGTHPDYYTLAPE-KGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD 122 C L AG+HPD+Y + PE + + +D +R + E L ++ GG +V V A +T Sbjct: 70 CCHLQAAGSHPDHYAVHPESEPGGPIKIDQIRRLIEFLMRSSQYGGYRVTLVDPADRMTL 129 Query: 123 AAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM 182 AAAN+LLKTLEEPPA L R+ +L ATLRSRCRL L PPP A WL+ Sbjct: 130 AAANSLLKTLEEPPAAAVLILVARQFSQLPATLRSRCRLVQLQPPPAVLAREWLAEHCP- 188 Query: 183 SQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAP 242 + L L+ G+P A+A Q L L ++ G +LAA N Sbjct: 189 ---EAIGLLALAGGAPLRAMAYAQAGTEGRYAALIADLL-AIVEGHRSPVLAAQNWTGIG 244 Query: 243 ARLHWLATLLMDALKRHHGAAQVTNVDVPGL---VAELANHLSPSRLQAILGDVCHIREQ 299 R W+ L + + A +D + L + S L + +V R Sbjct: 245 LR-DWIELLQLALAELARAAFTECELDRIPGRADLQTLTERIDHSCLHDYMEEVVATRRI 303 Query: 300 LMSVTGINRELLITDLLLRIEHYLQ 324 L +N +L+I DL +R + Sbjct: 304 LDQP--LNEQLVIEDLFIRWRTATR 326 >UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobacteria RepID=Q31PS7_SYNE7 Length = 652 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 80/354 (22%), Positives = 121/354 (34%), Gaps = 43/354 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P D L + R A L G G + L++ L CQQ Sbjct: 9 KYRPQCFADLVGQEAIARTLSQALAQQRIAPAYLFTGPRGTGKTSSARILAKSLNCQQST 68 Query: 54 -QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + G D + + GVD +RE+ E+ KV Sbjct: 69 VPTASPCGECEACRAIARGNALDVIEI---DAASNTGVDNIRELIERAQFAPVQCRFKVY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ AA NALLKTLEEPP F LAT +P+R+L T+ SRC+ P Q Sbjct: 126 VIDECHMLSTAAFNALLKTLEEPPDRVVFVLATTDPQRVLPTIISRCQRFDFRRIPLQAM 185 Query: 173 VTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNW---QARETLCQALAYSV 224 L + + A+ +L+ G A +L L +V Sbjct: 186 TDHLQVIAQKESIEIEPTAIALVAQLAQGGLRDAESLLDQLGLLPPPVTPEAVWDLLGAV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLL-----------------MDALKRHHGAAQVTN 267 P LL A+ A L + LL D L + Sbjct: 246 PERQLLQLLEAIAANDPEALLTLIRQLLDRGREPLTVLQNLTAFSRDLLIARTAPQRRDL 305 Query: 268 VDVP----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLL 317 V + A +P ++ + + Q+ + T L + LL Sbjct: 306 TTVTEATWQELCTFAEDWTPEQILQLQQHLRQSELQIKNTTQ--PRLWLEVALL 357 >UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMX9_9BACE Length = 623 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 115/348 (33%), Gaps = 35/348 (10%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ-GHKSCGHCRGC 65 R L + + HA L G+G ++ + C P ++C C C Sbjct: 22 QRALTTTLKNAIANQKLAHAYLFCGPRGVGKTTCARIFAKTINCLHPTADGEACNECESC 81 Query: 66 QLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAA 125 + + + L + V+ +R + E++ ++G KV + + +L+ AA Sbjct: 82 RAFNEQRSYNIHEL---DAASNNSVEDIRSLIEQVRIPPQIGKYKVYIIDEVHMLSQAAF 138 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REV 180 NA LKTLEEPP F LAT E ++L T+ SRC+++ V L + Sbjct: 139 NAFLKTLEEPPHHAIFILATTEKHKILPTILSRCQIYDFNRISVNDTVEHLENVARKEHI 198 Query: 181 TMSQDALLAALRLSAGSPGAALALFQG--------------------DNWQARETLCQAL 220 +AL + + G AL++F +++ L A Sbjct: 199 EAEPEALNVIAQKADGGMRDALSIFDQVVSFTNGHITYQSVIENLNVLDYEYYFKLTDAF 258 Query: 221 AYSVPSGDWYSLLAALNHE-QAPARLHWLATLLMDALKRHHGAA---QVTNVDVPGLVAE 276 + S + L + L + D L + Sbjct: 259 LENRVSDCLLTFNEVLKKGFDGNHFITGLTSHFRDLLVSRDDETLQLLEVGASIRDRYQA 318 Query: 277 LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 A SP L + L N+ LL+ L+++ Sbjct: 319 QAQKCSPQFLYKAMKLCNDC--DLNYRVSKNKRLLVELTLIQLAQLTG 364 >UniRef50_D1AZL2 DNA polymerase III, subunits gamma and tau n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZL2_SULD5 Length = 546 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 121/334 (36%), Gaps = 33/334 (9%) Query: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 + L ++ R HA L L G G + ++ L+C+Q C C C Sbjct: 26 QTLSSALNQNRLSHAYLFSGLRGSGKTSTARIFAKALVCEQGPNATPCDVCEHCLSANEN 85 Query: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 H D + + G+D +RE+ E K+ + + +LT A NALLKT Sbjct: 86 RHIDIIEM---DAASNRGIDDIRELIESTKYKPSSARFKIFIIDEVHMLTTQAFNALLKT 142 Query: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDA 186 LEEPP+ F LAT +P +L AT+ SR + + + L ++ ++A Sbjct: 143 LEEPPSYVKFILATTDPLKLPATILSRVQHFRFKQIKQSDVINHLCHILNLEKIEYEKEA 202 Query: 187 LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYS---VPSGDWYSLLAALNHEQAPA 243 L R GS L L L QA+ YS + ++L L+ +Q Sbjct: 203 LEMLSRAGNGSLRDTLTL-----------LDQAIIYSKGYITPEHVATMLGLLDPKQLET 251 Query: 244 RLHWLA----TLLMDALKRHHGAAQVTNVD-VPGLVA----ELANHLSPSRLQAILGDVC 294 + T L+ +K +D + + E S + + Sbjct: 252 LFSAILNGNKTELLGLIKTLESYECEVVMDELIAYLKNAFFEQDRRFSTLLYERFFKILS 311 Query: 295 HIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 + L N +++ +L ++ + Sbjct: 312 EAKSLL--YINANNGFILSLVLFKMVEATHIKTI 343 >UniRef50_A3ZPF5 DNA polymerase III gamma and tau subunits n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZPF5_9PLAN Length = 618 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 70/290 (24%), Positives = 112/290 (38%), Gaps = 23/290 (7%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P + + L + + GR HA L G+G + L++ L CQ+ Sbjct: 24 RYRPQSFEELVGQSQVAQALKNAIERGRVGHAYLFTGARGVGKTSSARILAKALNCQRGP 83 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + G D + G + G++ +R++ +N K+ + Sbjct: 84 SATPCNECDICRSVTVGEDVDVLEI---DGASNRGIEEIRQLRSNVNIRPSRARFKIYII 140 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + + T A NALLKTLEEPP F T +PE++ T+ SRC+ VT Sbjct: 141 DEVHMFTKEAFNALLKTLEEPPEHVKFIFCTTDPEKIPITVLSRCQRFDFGGIRMDEIVT 200 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDW 229 L+ VT +AL R + GS + +L E L + D Sbjct: 201 RLAYIVENEGVTAEPEALRLLARKANGSMRDSQSLL--------EQLLAFGGREITVADV 252 Query: 230 YSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELAN 279 +L A EQ + LA A+ + A +D L+ +L Sbjct: 253 NQMLGAAGSEQIAVIMTALAARDAAAVLAYFDQALTRGIDPGQLIEQLLG 302 >UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clostridium RepID=C9XIC8_CLODC Length = 545 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 130/356 (36%), Gaps = 42/356 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P D + L + HA L G G + SR + C Sbjct: 9 YRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFSRAVNCLNKIN 68 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + D + + VD +RE+ E + KV + Sbjct: 69 EEPCNECEICESVLKDNTMDVVEI---DAASNNSVDDIRELRESVKYSPANAKYKVYIID 125 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPP+ F LAT EP ++ AT+ SRC+ + + Sbjct: 126 EVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRYDFKRVTVKDMTLR 185 Query: 176 LS-----REVTMSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQA------ 219 + + + AL R S G+ AL++ G++ + + + Sbjct: 186 MKKICEDEGIDIDDKALNLIARNSQGALRDALSILDQCMSFGESKIDYKDVVELMGSVNI 245 Query: 220 -----LAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDAL--KRHHGAAQVTN 267 L+ + D L LN + ++ L + + K ++ + Sbjct: 246 EQLFELSQCIVEQDTKKSLEILNEFVLWGKDIRNLINDLIDHFRNLMVCKVSSELDEIIS 305 Query: 268 V--DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 + + + + ++ + L IL + ++ + S + N +L+ +++I Sbjct: 306 LPEETIEQLKIQSKNIDINDLIRILNILSITQDDIKSSS--NPRVLVEITIMKIAQ 359 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymera... 389 e-107 UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 389 e-107 UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymera... 388 e-106 UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 T... 384 e-105 UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Ta... 384 e-105 UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, puta... 383 e-105 UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Ta... 382 e-105 UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 T... 382 e-104 UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau sub... 380 e-104 UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, puta... 379 e-104 UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Sl... 379 e-104 UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 ... 379 e-103 UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Ta... 378 e-103 UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 ... 378 e-103 UniRef50_A6VYC4 DNA polymerase III, subunits gamma and tau n=1 T... 378 e-103 UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 T... 377 e-103 UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Ha... 377 e-103 UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=C... 377 e-103 UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 T... 377 e-103 UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 T... 377 e-103 UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 T... 377 e-103 UniRef50_D0WGG2 DNA polymerase III, subunit gamma and tau n=1 Ta... 377 e-103 UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 T... 376 e-103 UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase... 375 e-102 UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Ta... 375 e-102 UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 375 e-102 UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymera... 375 e-102 UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 T... 375 e-102 UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 T... 374 e-102 UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 T... 374 e-102 UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase... 374 e-102 UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 T... 374 e-102 UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacte... 374 e-102 UniRef50_C9PPQ1 DNA polymerase III subunit gamma/tau n=1 Tax=Pas... 374 e-102 UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 T... 373 e-102 UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W... 372 e-102 UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 ... 372 e-102 UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 T... 372 e-102 UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydroba... 372 e-101 UniRef50_Q13Z80 DNA-directed DNA polymerase n=48 Tax=Burkholderi... 372 e-101 UniRef50_Q0A8H8 DNA polymerase III, tau subunit / DNA polymerase... 372 e-101 UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Ta... 372 e-101 UniRef50_B5FFM6 DNA polymerase III subunit tau n=2 Tax=Vibrio fi... 371 e-101 UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 T... 371 e-101 UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=roo... 371 e-101 UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma ... 371 e-101 UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 T... 371 e-101 UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseria... 371 e-101 UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 T... 370 e-101 UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 T... 370 e-101 UniRef50_P43746 DNA polymerase III subunit gamma/tau n=23 Tax=Pa... 370 e-101 UniRef50_A3YHQ6 DNA polymerase III subunits gamma and tau n=1 Ta... 370 e-101 UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bactero... 370 e-101 UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Co... 369 e-101 UniRef50_B6EJ42 DNA polymerase III subunit tau n=8 Tax=Vibrionac... 369 e-101 UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 T... 369 e-101 UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 T... 369 e-101 UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcu... 369 e-101 UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella a... 369 e-101 UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 T... 368 e-100 UniRef50_A9D7T4 DNA polymerase III, gamma and tau subunits n=2 T... 368 e-100 UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lys... 368 e-100 UniRef50_B8KYG2 DNA polymerase III, gamma and tau subunit n=1 Ta... 367 e-100 UniRef50_A0YC05 DNA polymerase III subunits gamma and tau n=1 Ta... 367 e-100 UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 T... 367 e-100 UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 T... 367 e-100 UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 T... 367 e-100 UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 T... 367 e-100 UniRef50_B7VL96 DNA polymerase III subunit tau n=11 Tax=Vibriona... 367 e-100 UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicr... 367 e-100 UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 T... 367 e-100 UniRef50_Q7MIV2 DNA polymerase III, subunits gamma and tau n=41 ... 366 e-100 UniRef50_P06710 DNA polymerase III subunit gamma n=112 Tax=Enter... 366 e-100 UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Ta... 366 e-100 UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 T... 366 e-100 UniRef50_Q1QAW7 DNA polymerase III, gamma subunit / DNA polymera... 366 e-100 UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, puta... 366 e-100 UniRef50_D0ZED4 DNA polymerase III, subunits gamma and tau n=2 T... 366 e-100 UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=D... 366 e-100 UniRef50_A1SX03 DNA polymerase III, tau subunit / DNA polymerase... 366 e-100 UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D... 366 e-100 UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Ta... 365 e-100 UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 365 e-100 UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax... 365 e-100 UniRef50_C6ITP2 DNA polymerase III subunit gamma/tau n=10 Tax=Ba... 365 1e-99 UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 365 2e-99 UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 T... 365 2e-99 UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 T... 364 2e-99 UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Ta... 364 2e-99 UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 T... 364 3e-99 UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostri... 364 3e-99 UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 T... 364 3e-99 UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteri... 364 3e-99 UniRef50_C3QNI8 DNA polymerase III subunit gamma/tau n=13 Tax=Ba... 364 3e-99 UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 T... 364 4e-99 UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus Rep... 363 5e-99 UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Ta... 363 5e-99 UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobac... 363 6e-99 UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=ce... 362 7e-99 UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 T... 362 9e-99 UniRef50_C5AFH6 DNA polymerase III, subunits gamma and tau n=1 T... 362 9e-99 UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clo... 362 1e-98 UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 T... 362 1e-98 UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Ba... 362 1e-98 UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 T... 362 2e-98 UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79... 361 2e-98 UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 T... 361 2e-98 UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Ta... 361 2e-98 UniRef50_Q2RZH6 DNA polymerase III, subunits gamma and tau, puta... 361 2e-98 UniRef50_C4G1W4 Putative uncharacterized protein n=1 Tax=Abiotro... 361 2e-98 UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau... 361 2e-98 UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Ta... 360 3e-98 UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Ba... 360 3e-98 UniRef50_A5VIC2 DNA polymerase III, subunits gamma and tau n=39 ... 360 3e-98 UniRef50_Q47HW9 AAA ATPase, central region n=3 Tax=Betaproteobac... 360 3e-98 UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clo... 360 3e-98 UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1... 360 5e-98 UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 T... 360 5e-98 UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Ta... 360 5e-98 UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 T... 359 6e-98 UniRef50_C3XBH9 DNA polymerase III subunit gamma n=2 Tax=Oxaloba... 359 7e-98 UniRef50_Q1ATA7 DNA polymerase III, subunits gamma and tau n=1 T... 359 7e-98 UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 T... 359 8e-98 UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 T... 359 8e-98 UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Ta... 359 8e-98 UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymera... 359 9e-98 UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dic... 359 1e-97 UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and ta... 359 1e-97 UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, puta... 358 1e-97 UniRef50_A6GQQ4 AAA ATPase, central region n=1 Tax=Limnobacter s... 358 2e-97 UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Ta... 358 2e-97 UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subuni... 358 2e-97 UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 T... 358 2e-97 UniRef50_Q6FAW7 DNA polymerase III, tau and gamma subunits (DNA ... 358 2e-97 UniRef50_A4C5P9 Putative DnaX, DNA polymerase III, gamma/tau sub... 357 2e-97 UniRef50_C5S1I5 DNA polymerase III subunits gamma and tau n=2 Ta... 357 3e-97 UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 T... 357 3e-97 UniRef50_UPI00016C46EC DNA polymerase III gamma and tau subunits... 357 3e-97 UniRef50_A5EY35 DNA polymerase III, subunits gamma and tau n=1 T... 357 4e-97 UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 T... 357 4e-97 UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA ... 357 5e-97 UniRef50_B1WS93 DNA polymerase III gamma and tau subunits n=6 Ta... 356 5e-97 UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenel... 356 5e-97 UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 T... 356 6e-97 UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdema... 356 7e-97 UniRef50_UPI0001C37DC8 DNA polymerase III subunits gamma and tau... 355 9e-97 UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=unc... 355 9e-97 UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits ... 355 9e-97 UniRef50_Q47XQ9 DNA polymerase III, gamma/tau subunit n=1 Tax=Co... 355 1e-96 UniRef50_B9CMB1 DNA polymerase III subunit gamma/tau n=1 Tax=Ato... 355 1e-96 UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=P... 354 2e-96 UniRef50_B1ZQU6 DNA polymerase III, subunits gamma and tau n=3 T... 354 2e-96 UniRef50_A3ZPF5 DNA polymerase III gamma and tau subunits n=1 Ta... 354 2e-96 UniRef50_B9L692 DNA polymerase III, subunits gamma and tau n=1 T... 354 2e-96 UniRef50_A6T0H3 DNA polymerase III gamma and tau subunit n=3 Tax... 353 3e-96 UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacill... 353 4e-96 UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 353 6e-96 UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 T... 353 6e-96 UniRef50_A0L8F3 DNA polymerase III, gamma subunit / DNA polymera... 353 7e-96 UniRef50_C6BXI6 DNA polymerase III, subunits gamma and tau n=1 T... 352 8e-96 UniRef50_B0MPA0 Putative uncharacterized protein n=1 Tax=Eubacte... 352 9e-96 UniRef50_C9RAG1 DNA polymerase III, subunits gamma and tau n=1 T... 352 1e-95 UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Mic... 352 1e-95 UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=De... 352 1e-95 UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Be... 352 1e-95 UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 T... 352 1e-95 UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 T... 352 1e-95 UniRef50_Q609A7 DNA polymerase III, gamma and tau subunits n=2 T... 351 2e-95 UniRef50_B5EJD9 DNA polymerase III, subunits gamma and tau n=3 T... 350 3e-95 UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 T... 350 3e-95 UniRef50_C7H4D6 DNA polymerase III, gamma/tau subunit n=3 Tax=Ru... 350 3e-95 UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 T... 350 4e-95 UniRef50_D1VUH2 DNA polymerase III, gamma and tau subunit n=1 Ta... 350 4e-95 UniRef50_A6LDQ5 DNA polymerase III subunit gamma/tau n=19 Tax=Ba... 350 5e-95 UniRef50_A6DLE8 DNA polymerase III, gamma and tau subunits n=1 T... 350 5e-95 UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 T... 350 6e-95 UniRef50_Q0B0W5 DNA-directed DNA polymerase n=1 Tax=Syntrophomon... 349 7e-95 UniRef50_A1WTL4 DNA polymerase III, subunits gamma and tau n=6 T... 348 1e-94 UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragm... 348 2e-94 UniRef50_C4LG88 DNA polymerase III, gamma and tau subunit n=1 Ta... 347 3e-94 UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Ta... 347 3e-94 UniRef50_A9HZ16 DNA polymerase III subunit Tau n=6 Tax=Bordetell... 347 3e-94 UniRef50_A5FRM9 DNA polymerase III, subunits gamma and tau n=5 T... 347 3e-94 UniRef50_A4E9Y5 Putative uncharacterized protein n=2 Tax=Collins... 347 3e-94 UniRef50_B1L8C0 DNA polymerase III, subunits gamma and tau n=6 T... 347 3e-94 UniRef50_C7PSN6 DNA polymerase III, subunits gamma and tau n=1 T... 347 4e-94 UniRef50_C7QXQ5 DNA polymerase III, subunits gamma and tau n=2 T... 347 4e-94 UniRef50_B1XPA0 DNA-directed DNA polymerase III chain dnaX n=2 T... 347 4e-94 UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 T... 347 4e-94 UniRef50_Q5X1E1 DNA polymerase III, gamma and tau subunits n=6 T... 347 5e-94 UniRef50_B8F323 DNA polymerase III subunits gamma and tau n=4 Ta... 346 5e-94 UniRef50_B6J935 DNA polymerase III subunit gamma/tau n=6 Tax=Cox... 346 6e-94 UniRef50_B2GFF0 DNA polymerase III gamma/tau subunit n=52 Tax=ce... 345 9e-94 UniRef50_C7NGE4 DNA polymerase III, subunit gamma/tau n=2 Tax=Mi... 345 1e-93 UniRef50_Q1Q394 Similar to DNA polymerase III subunit gamma/tau ... 345 1e-93 UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bac... 345 2e-93 UniRef50_B8DQU3 DNA polymerase III, subunits gamma and tau n=2 T... 345 2e-93 UniRef50_Q493A4 DNA polymerase III, tau and gamma subunits n=2 T... 345 2e-93 UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 T... 344 2e-93 UniRef50_A5N3V9 DnaX n=34 Tax=Clostridium RepID=A5N3V9_CLOK5 344 2e-93 UniRef50_C4XU00 DNA polymerase III gamma and tau subunit n=2 Tax... 344 2e-93 UniRef50_Q0BVJ3 DNA polymerase III subunit gamma/tau n=8 Tax=Alp... 344 3e-93 UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n... 344 3e-93 UniRef50_D1S8R6 DNA polymerase III, subunits gamma and tau n=1 T... 344 3e-93 UniRef50_C0GUE6 DNA polymerase III, subunits gamma and tau n=1 T... 344 3e-93 UniRef50_Q1G919 DNA polymerase III, gamma/tau subunit n=26 Tax=L... 343 3e-93 UniRef50_A9BMI7 DNA polymerase III, subunits gamma and tau n=18 ... 343 3e-93 UniRef50_C2D9N9 DNA polymerase III gamma and tau subunits n=1 Ta... 343 4e-93 UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 T... 343 4e-93 UniRef50_B4UA58 DNA polymerase III, subunits gamma and tau n=3 T... 343 4e-93 UniRef50_B7K934 DNA polymerase III, subunits gamma and tau n=1 T... 343 4e-93 UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2... 343 4e-93 UniRef50_Q6ABA1 DNA polymerase III subunit gamma n=4 Tax=Propion... 343 5e-93 UniRef50_A6QBX8 DNA polymerase III, gamma/tau subunits n=1 Tax=S... 343 5e-93 UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 T... 343 6e-93 UniRef50_C2MCK6 DNA polymerase III, subunits gamma and tau n=2 T... 343 7e-93 UniRef50_C8WB95 DNA polymerase III, subunits gamma and tau n=4 T... 342 8e-93 UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candida... 342 8e-93 UniRef50_B4CYL6 DNA polymerase III, subunits gamma and tau n=1 T... 342 1e-92 UniRef50_C5PXF7 DNA polymerase III, tau and gamma subunits n=1 T... 342 1e-92 UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Ta... 342 2e-92 UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 T... 341 2e-92 UniRef50_C0JZX8 DNA polymerase III subunit gamma/tau n=1 Tax=unc... 341 2e-92 UniRef50_C7Q5N1 DNA polymerase III, subunits gamma and tau n=2 T... 341 2e-92 UniRef50_B2RJ68 DNA polymerase III, gamma and tau subunits n=2 T... 341 2e-92 UniRef50_A4XJ39 DNA polymerase III, subunits gamma and tau n=2 T... 341 3e-92 UniRef50_C8WQ66 DNA polymerase III, subunits gamma and tau n=2 T... 340 3e-92 UniRef50_B6BKU4 DNA polymerase III gamma and tau subunits DnaX n... 340 3e-92 UniRef50_Q1MPV7 DNA polymerase III, gamma/tau subunits n=1 Tax=L... 340 3e-92 UniRef50_D1AZL2 DNA polymerase III, subunits gamma and tau n=1 T... 340 4e-92 UniRef50_UPI00017455DA DNA polymerase III, gamma and tau subunit... 340 6e-92 UniRef50_B8HBY1 DNA polymerase III, subunits gamma and tau n=1 T... 340 6e-92 UniRef50_Q1NUY3 DNA-directed DNA polymerase n=5 Tax=Deltaproteob... 339 7e-92 UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 T... 339 7e-92 UniRef50_Q3B0U5 DNA polymerase III, tau subunit n=14 Tax=Cyanoba... 339 9e-92 UniRef50_C1ZCQ4 DNA polymerase III, subunit gamma/tau n=1 Tax=Pl... 339 9e-92 UniRef50_B6BTP5 DNA polymerase subunits gamma and tau n=1 Tax=be... 339 1e-91 UniRef50_A8PNF7 DNA polymerase III subunit tau n=1 Tax=Rickettsi... 339 1e-91 UniRef50_C5ZV42 DNA polymerase III subunits gamma and tau n=2 Ta... 339 1e-91 UniRef50_A7HGU5 DNA polymerase III, subunits gamma and tau n=5 T... 338 1e-91 UniRef50_A7NLI5 DNA polymerase III, subunits gamma and tau n=2 T... 338 1e-91 UniRef50_C1CYE9 Putative DNA polymerase III, subunits gamma and ... 338 1e-91 UniRef50_B4S8V3 DNA polymerase III, subunits gamma and tau n=11 ... 338 2e-91 UniRef50_A1V9U7 DNA polymerase III, subunits gamma and tau n=5 T... 338 2e-91 UniRef50_C8PKZ6 DNA polymerase III subunit tau n=1 Tax=Campyloba... 338 2e-91 UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 T... 337 3e-91 UniRef50_A0JSD4 DNA polymerase III, subunits gamma and tau n=4 T... 337 3e-91 UniRef50_Q1JL73 DNA polymerase III subunit gamma/tau n=74 Tax=St... 337 3e-91 UniRef50_B5YKX9 DNA polymerase III subunit gamma/tau n=1 Tax=The... 337 3e-91 UniRef50_A6LMU3 DNA polymerase III, subunits gamma and tau n=1 T... 337 4e-91 Sequences not found previously or not previously below threshold: >UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=8 Tax=Gammaproteobacteria RepID=Q21L32_SACD2 Length = 690 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 83/367 (22%), Positives = 132/367 (35%), Gaps = 42/367 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L+ + GR HHA L G+G ++ L++ L C+ Sbjct: 9 KWRPRTFREMIGQEHVLRALINALDHGRLHHAYLFTGTRGVGKTSIARILAKCLNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C + G D + + V+ RE+ + + G K+ + Sbjct: 69 SSEPCGECSACVEISEGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTRGRYKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L++ + NALLKTLEEPP F LAT +P++L T+ SRC L + V Sbjct: 126 DEVHMLSNHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKNMSPERIVG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + AL R + GS AL+L + E ++ ++ Sbjct: 186 HLSHILEKEVIPFEESALWQLARSADGSMRDALSLTDQSISFGGGKVSEDEVASMLGTID 245 Query: 226 SGDWYSLLAALNHEQAPARLH-----------------WLATLLMDALKRHHGAAQVTNV 268 +L+ AL L L TLL + N Sbjct: 246 HKLVQNLVGALIAGDGSQILTSVAKFAEHAPDFDVALADLITLLHRIAIAQALPDALDNS 305 Query: 269 --DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 D ++ E A+ L+P +Q R L + LLR+ +P Sbjct: 306 YGDRTQIL-EFASKLAPEDVQLFYQTALIGRRDLSLSP--DPRSGFEMTLLRML-AFKPQ 361 Query: 327 VVLPVPH 333 V VP Sbjct: 362 GVADVPT 368 >UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8CMY6_SHEPW Length = 946 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 83/361 (22%), Positives = 125/361 (34%), Gaps = 38/361 (10%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 9 KWRPAKFEQMVGQSHVLHALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAKGLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TATPCGQCSACVEIAEGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPSRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P+RL T+ SRC L + Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQDEISD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + AL + + GS AL+L Q + L Q + S+ Sbjct: 186 QLTNVLTAESLEFEATALTLLAKAANGSMRDALSLTDQAIAFGAGQVKLELVQTMLGSID 245 Query: 226 SGDWYSLLAALNHEQA-----------------PARLHWLATLLMDALKRHHGAAQVTNV 268 +LL AL L L LL A Sbjct: 246 EKQVIALLEALAKADVMALMQVSAGVLSFGAEPEEVLRSLLELLHQITLTQFAPAAAQMS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 + A LSP ++Q + R+ L + + + LLR ++ V Sbjct: 306 LYSEQIKAFAQQLSPEQVQLYYQLLLTGRKDL--PHAPDPKSGLEMALLRAVTFVPEQPV 363 Query: 329 L 329 Sbjct: 364 S 364 >UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=4 Tax=Gammaproteobacteria RepID=A1U128_MARAV Length = 637 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 88/366 (24%), Positives = 132/366 (36%), Gaps = 40/366 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L+ + + R HHA L G+G + L+R L C+ Sbjct: 9 KWRPRTFEDMVGQEHVLQALIHALEHQRLHHAYLFTGTRGVGKTTIGRLLARCLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + D + + GVD +RE+T+ + G KV + Sbjct: 69 TPNPCGECDSCKEILENRFVDLIEI---DAASRTGVDDMRELTDNVQYAPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ + NA LKTLEEPP F LAT +P++L T+ SRC L ++ V Sbjct: 126 DEVHMLTNQSFNAFLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRMTPEHIVG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L ++ AL R + GS AL+L E L + ++ Sbjct: 186 HLKHVLTEEQIPFEDPALWLLARAADGSMRDALSLTDQAIAFGNENLAASDVSNMLGTID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLAT----------LLMDALKRHHGAAQVTNVD------ 269 D ++ AL P L + +L D L H V Sbjct: 246 QRDIQRIVNALVERDGPGLLSEINRISDFAPDYGVILSDMLSLFHRVTMEQVVPGSADNA 305 Query: 270 --VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 V ELA LS Q R+ L + + LLR+ +PG Sbjct: 306 MGDAAQVQELARRLSAEDAQLFYQTALIGRKDLSVTP--DARMGFEMTLLRML-AFRPGT 362 Query: 328 VLPVPH 333 P Sbjct: 363 DRREPP 368 >UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 Tax=Shewanella RepID=A1RIP8_SHESW Length = 984 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 123/350 (35%), Gaps = 38/350 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 36 KWRPATFEQMVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGV 95 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 96 TATPCGVCGSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 152 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L + T Sbjct: 153 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQDEIGT 212 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +AL + + GS AL+L T Q + S+ Sbjct: 213 QLNHILTQEQLPFEVEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLTQVQTMLGSID 272 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 +LL AL A L L LL A Sbjct: 273 EQHVIALLKALTDADITVLMQTSAQVLAYGADAQEVLRSLLELLHQITLTQFAPACAQQS 332 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 + A L+P ++Q + R+ L + + + LLR Sbjct: 333 LYSAQIRAFAEQLTPEQVQLYYQILLTGRKDL--PHAPDPKSGLEMALLR 380 >UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Tax=Clostridiales RepID=C7GFD5_9FIRM Length = 526 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 69/357 (19%), Positives = 131/357 (36%), Gaps = 45/357 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L +A R HA L G G + ++ + C+ P Sbjct: 9 KFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKIFAKAVNCEHPV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + AG + + + GVD +R++ E++ G KV + Sbjct: 69 DGSPCGECPACRAIAAGNSMNVIEI---DAASNNGVDNIRQIREEVEYRPTEGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP+ F LAT E ++ T+ SRC+ + + Sbjct: 126 DEVHMLSIGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRISIETISA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG------DNWQARETLCQALAYS 223 L +VT+ + A+ + + GS AL+L + + + L + Sbjct: 186 RLMELMEKEQVTVEERAIRYIAKAADGSMRDALSLLDQCIAFYLGQDLTYDKVLETL-GA 244 Query: 224 VPSGDWYSLLAALNHEQAPARLHWLAT-----------------LLMDALKRHHGAAQVT 266 V + + LL + + + + L + + Sbjct: 245 VDTEIFSRLLRQILEKNVTGAIGVIDEMVIEGRELGQFVNDFTWYLRNLMLVQSSDDMED 304 Query: 267 NVDV----PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 +D+ L+ E A + L + + Q+ + + +LI ++++ Sbjct: 305 VLDISTENLALLKEEAQMVDTDILMRYIRIFSELSNQIRYA--VQKRILIEIAVIKL 359 >UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y5_9GAMM Length = 569 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 75/351 (21%), Positives = 119/351 (33%), Gaps = 38/351 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L+ R HHA L G+G L ++ L C+Q Sbjct: 9 KWRPKSFEEVVGQQHVLRALINGLDQNRLHHAFLFSGTRGVGKTTLARIFAKSLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C+ C + +G D + + VD RE+ + + G KV + Sbjct: 69 SSTPCGVCQSCTEVDSGRFVDLIEV---DAASRTKVDDTRELLDNVQYAPSQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F AT +P++L T+ SRC L Sbjct: 126 DEVHMLSTSSFNALLKTLEEPPPHVKFLFATTDPQKLPVTILSRCLQFNLRRLELTQISD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + +AL R + GS AL+L + + S+ Sbjct: 186 HLRYLLEQETIKAEPEALEQLARAADGSMRDALSLLDQAIAFGGGEVTSESVFQMLGSIS 245 Query: 226 SGDWYSLLAALNHEQAPARL-----------------HWLATLLMDALKRHHGAAQVTNV 268 +L AL + A L +L + L Sbjct: 246 QDQLILILDALLKQDGKALLAQSAELAALGRDFHVVFDFLLSALQQIATLQLVPDLEPVE 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + ELA P +Q + H + L + + L+R+ Sbjct: 306 ANSPQLTELAAQFDPETIQLLYQIALHGKRDLSWAA--DPKSGFDMTLMRM 354 >UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Tax=Veillonellaceae RepID=C9KLC0_9FIRM Length = 631 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 70/356 (19%), Positives = 126/356 (35%), Gaps = 41/356 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + +G HA L G G + L++ L C+ Sbjct: 9 KWRPQTFKDLVGQEHISRTLANAITSGHIGHAYLFAGPRGTGKTSTAKILAKALNCEHGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + G+ D + + + G+D +R++ E + G KV + Sbjct: 69 TPEPCGQCEQCRKIADGSSMDVFEI---DAASNRGIDEIRDLRETVKFAPVDGRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPPA F LAT E ++ T++SRC+ + + + Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPAHVVFILATTEAHKVPPTIQSRCQRYDFKRITVEEIES 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +AL + G AL++ + + V Sbjct: 186 RLRYITAEMKMEAEDEALAMIAIQADGGMRDALSILDQCAALAEGTITAERVRQILGLVG 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQV-------------------- 265 Y + AL L LA LL D +++ Sbjct: 246 HDWIYKMTKALAARNVQEALQILAELLRDGKDLKQILSELSLHLRSLMIFQAAGTVEAMD 305 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 + ++ + A +P L ++ + ++ + + L+ + Sbjct: 306 LYAEPQDVLQDQAKLFAPEVLPRMIARLHEAMTEMKWSPQ--PRITVEVALMELCR 359 >UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 Tax=Bacteria RepID=A3QF53_SHELP Length = 1113 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 80/350 (22%), Positives = 120/350 (34%), Gaps = 38/350 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 9 KWRPATFEQVVGQSHVLHALTNALSQNRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TATPCGQCASCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P+RL T+ SRC L Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTLDEICV 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +V A+ + + GS AL+L Q R T Q + ++ Sbjct: 186 QLGHILAQEQVGYDDGAVKLLAKAANGSMRDALSLTDQAIAFGAGQVRLTQVQTMLGTID 245 Query: 226 SGDWYSLLAALNHEQAP-----------------ARLHWLATLLMDALKRHHGAAQVTNV 268 LL AL L L LL + Sbjct: 246 EHHVIVLLKALCDGDVDLLMKVTGDVLSFGADPHEVLRSLLELLHQITLTQFAPSAAQLS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 + A L P ++Q + + R+ L + + + LLR Sbjct: 306 QYAEQIKAFAKQLRPEQVQLYYQLLLNGRQDL--PHAPDPKSGLEMALLR 353 >UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau subunits n=2 Tax=Alteromonadales RepID=Q3IKN4_PSEHT Length = 842 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 82/352 (23%), Positives = 136/352 (38%), Gaps = 39/352 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + LV + R HHA L G+G + ++ L C + Sbjct: 9 KWRPQTFHELVGQSHVKQALVNALTQNRLHHAYLFTGTRGVGKTTIARIFAKSLNCDEGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++AG + D + + V+ RE+ + + G KV + Sbjct: 69 SANPCGQCSSCKDIEAGRYIDLLEI---DAASRTKVEDTREILDNVQYAPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L + T Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNALSQSEIKT 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L ++ DAL + + GS AL+L N Q + + Sbjct: 186 QLEHVLTHEKLNFDDDALRIIAKAADGSMRDALSLTDQAIAQTNGDINNQAVQTMLGLMD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLAT----------LLMDALKRHHGAAQVTNVDVPGLVA 275 + SLLAAL + A + +A LL D + H V + Sbjct: 246 THYSQSLLAALLAQDGAALMKEVANVASRNPNYVALLDDLIALTHLTQLSQLVPEAAALD 305 Query: 276 E--------LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 E +A + +P ++Q + + ++ L L ++LR+ Sbjct: 306 ETNADYITHVAQNTNPQQIQIYYQLLLNGKKDLQWAPE--PRLGFEMIMLRL 355 >UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RU95_9GAMM Length = 591 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 83/362 (22%), Positives = 133/362 (36%), Gaps = 40/362 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L+ + R HHA L G+G + L++ L C+Q Sbjct: 9 KWRPKSFGEMVGQEHVLQALINALDHDRLHHAYLFTGTRGVGKTTIARILAKCLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + V+ RE+ E + KV + Sbjct: 69 SSHPCGECGSCLEIAEGRSVDLLEV---DAASRTKVEDTRELLENVQYAPTRSRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L AT+ SRC L P + V Sbjct: 126 DEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPATVLSRCLQFNLKNMPPEQIVG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ V+ + AL R ++GS AL+L + + ET +++ SV Sbjct: 186 HLANVLEHEMVSFEEPALWLLGRAASGSMRDALSLTDQAIAFGSGKLIETDVRSMLGSVD 245 Query: 226 SGDWYSLLAALNHEQAPARL-----------------HWLATLLMDALKRHHGAAQVTNV 268 Y LL + L L +++ + N Sbjct: 246 LSFVYQLLEGVAAGDPAELLAIVGRMAEHAPDFEGSTDELISMVHRVAVAQAVPDAIDNS 305 Query: 269 -DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 VA LA + Q + + + + LLLR+ +P Sbjct: 306 WGDADRVAALAQSIGAEDAQLFYQIAINGKRDMALAP--DPRSGFEMLLLRML-AFRPAA 362 Query: 328 VL 329 V+ Sbjct: 363 VI 364 >UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N1K9_SLAHD Length = 807 Score = 379 bits (974), Expect = e-104, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 132/371 (35%), Gaps = 46/371 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D L + Q HA L G G + L++ LLC+ Sbjct: 8 KYRPQTFDDVVGQTHVERTLKNALQQDHVSHAYLFCGPRGTGKTTMARLLAKALLCEHGP 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 G C CQL+ G HPD L + GVD VRE + ++ G K+ Sbjct: 68 TPSPDGTCEECQLIAEGAHPDVNEL---DAASRTGVDNVREEIIGRVQFAPTRGRYKIYI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT A NALLKTLEEPPA F + T +P+++ T+ SRC+ + V Sbjct: 125 IDEVHMLTVPAFNALLKTLEEPPAHVVFVMCTTDPQKIPETILSRCQRFDFHRLSNEEIV 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 + L + +V +AL R + G AL + + A S+ Sbjct: 185 SRLGAVCMAEDVPFEGEALDLIARRAQGGMRDALTALEQLIAFGAGNVTMDVANAALGSL 244 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLL----------MDALKRHHGAAQVTNVD----- 269 D + + A A W+A + D + D Sbjct: 245 DVNDMSEIAGHIGRRDAAACFTWMAEYVETGADLAQFARDLASYVRDMYVFSLTDGAVGL 304 Query: 270 ------VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 +AE A RL IL + + L S T N L L R+ + Sbjct: 305 SSASSSNQQQLAEDAKLYGTDRLAYILDVLGDLNTSLRSST--NPRLSFEIALTRM---V 359 Query: 324 QPGVVLPVPHL 334 +P L + L Sbjct: 360 RPQSDLTLEAL 370 >UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 Tax=cellular organisms RepID=A3D5Q4_SHEB5 Length = 1147 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 80/350 (22%), Positives = 122/350 (34%), Gaps = 38/350 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 36 KWRPATFDQMVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGV 95 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 96 TATPCGACGSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 152 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L + T Sbjct: 153 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQGEIGT 212 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + +A+ + + GS AL+L T Q + S+ Sbjct: 213 QLNHILTQEQFPFDAEAIKLLAKAANGSMRDALSLTDQAIAFGGGNVMLTQVQTMLGSID 272 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 +LL AL A L L LL A Sbjct: 273 EQHVVALLKALTDADIGVLMHTCAQVLAYGADAQEVLRSLLELLHQITLTQFAPAAAQQS 332 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 + A L+P ++Q + R+ L + + + LLR Sbjct: 333 LYSAQIRAFAEQLTPEQVQLYYQILLTGRKDL--PHAPDPKSGLEMALLR 380 >UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHA0_BREBN Length = 565 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 78/355 (21%), Positives = 132/355 (37%), Gaps = 41/355 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P D L + + R HA L G G + +++ + C+QP Sbjct: 10 YRPQTFQDVVGQEHVTTTLRNALRENRLSHAYLFNGPRGTGKTSAAKIMAKAVNCEQPID 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G+ D + + GV+ +R++ +K+ KV + Sbjct: 70 GEPCNQCDTCRAISNGSVTDVLEI---DAASNRGVEEIRDIRDKVKFAPSDVRYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP+ F LAT EP +L AT+ SRC+ P + V Sbjct: 127 EVHMLTTEAFNALLKTLEEPPSHVIFILATTEPHKLPATIISRCQRFDFHRIPLRVMVDL 186 Query: 176 LS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQA----------- 219 L + V + + AL +++ G AL+L +++ + + Sbjct: 187 LQRICQSQGVQVEEQALQLVAKMAEGGARDALSLLDQAISYSKDEVRASDIMQITGTVAQ 246 Query: 220 -----LAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 LA + D ++ + + LH D L V+ Sbjct: 247 SYFSVLARHIAENDIAQVMEQFDKVMVQGKDPEQFLHDFLYYYRDMLLLKTAPQLEEIVE 306 Query: 270 V---PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 AE+A S L A + QL T +L+ L+++ Sbjct: 307 RTMIDDQFAEVAKLYSFPVLYAAIETCNQALSQLKWST--YARVLVELTLVKMCQ 359 >UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 Tax=Pseudomonadaceae RepID=Q48KQ6_PSE14 Length = 737 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 132/358 (36%), Gaps = 40/358 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L+ + + R HHA L G+G + +++ L C+ Sbjct: 9 KWRPRSFREMVGQAHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAKCLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ RE+ + + G KV + Sbjct: 69 TSTPCGTCSVCKEIDEGRFVDLIEI---DAASRTKVEDTRELLDNVQYAPSRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L AT+ SRC L + V Sbjct: 126 DEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTPERVVE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ V DAL R + GS A++L + +A+ ++ Sbjct: 186 HLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE--------- 276 G + +L AL A L + L + +++ NV +A+ Sbjct: 246 HGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPEGVDNG 305 Query: 277 ---------LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 LA L +Q R L + +LLR+ +P Sbjct: 306 HGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAP--DPRGGFEMVLLRML-AFRP 360 >UniRef50_A6VYC4 DNA polymerase III, subunits gamma and tau n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VYC4_MARMS Length = 752 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 90/367 (24%), Positives = 139/367 (37%), Gaps = 41/367 (11%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ-QP 53 +W P + LV + + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPQTFLEMAGQDHVLQALVNALRQQRLHHAYLFTGTRGVGKTTIARIFAKCLNCETNG 68 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + CG C C+ + G D + + V+ RE+ E + G KV Sbjct: 69 ISPEPCGTCDSCREIAEGRFVDLIEV---DAASRTKVEDTRELLENVQYAPTRGRFKVYL 125 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ + NALLKTLEEPPA F LAT +P++L T+ SRC L Q V Sbjct: 126 IDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMSPQRVV 185 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 +L EV Q AL + + GS AL+L N E+ A+ V Sbjct: 186 DYLQTVLTTEEVNFDQPALWQIGQAANGSMRDALSLTDQAIAFGNGTISESGVTAMLGLV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATL-------------LMDALKRHHGAAQVTNVDVP 271 LL ++ + A L + L L+D L R QV + Sbjct: 246 NQAQVLDLLESVASKNAAQVLTRIEQLADYQPDFTAICGSLLDVLHRVAIEQQVPGALMD 305 Query: 272 GL-----VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 L + +A +S +Q + + R L + L+LR+ +P Sbjct: 306 QLGDLARIQAIAASVSSEEIQIMYQSLLIGRRDLHLAH--SARAGFEMLMLRLI-AFRPA 362 Query: 327 VVLPVPH 333 + V H Sbjct: 363 PPMVVSH 369 >UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 Tax=Gammaproteobacteria RepID=Q0HHZ2_SHESM Length = 1071 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 80/350 (22%), Positives = 123/350 (35%), Gaps = 38/350 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C++ Sbjct: 9 KWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEKGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TASPCGVCGSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L +Q T Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQQEIGT 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +AL + + GS AL+L Q++ S+ Sbjct: 186 QLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSMLGSID 245 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 LL AL A L L LL A Sbjct: 246 EQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPAAAQQS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 + A L+P ++Q + R+ L + + + LLR Sbjct: 306 LYSAQIQAFAEQLAPEQVQLYYQILLTGRKDL--PHAPDPKSGLEMALLR 353 >UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIX1_HAHCH Length = 735 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 79/360 (21%), Positives = 128/360 (35%), Gaps = 40/360 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + R HHA L G+G + ++ L C+Q Sbjct: 9 KWRPGNFAEMAGQEHVLKALTNALNQDRLHHAYLFTGTRGVGKTTVARIFAKCLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ +RE+ + + K+ + Sbjct: 69 SAIPCGECGVCREIAEGRFVDLIEI---DAASRTKVEDMRELLDNVQYAPTRSRYKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L++++ NALLKTLEEPP F LAT +P++L T+ SRC L Q V+ Sbjct: 126 DEVHMLSNSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKNLSPQRIVS 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + V + AL R + GS A++L + + + ++ Sbjct: 186 HLTHVLQAENVPAEEAALWELARAAEGSMRDAMSLTDQAIAFGDGKLEAKDVIEMLGTIE 245 Query: 226 SGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHGAAQVTNV 268 LL + + A L LA LL V N Sbjct: 246 KHVVIDLLRTIAAQDCAAMLAQVNHMAQFAPDYAYVLQALAELLHRVAVEQAVPGGVDNS 305 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 V+ELA L+ Q R+ L + LLR+ +P + Sbjct: 306 FGDQQQVSELAQTLTAEDTQLYYQIALMGRKDLALAP--DPRTGFEMALLRMI-AFRPNI 362 >UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJV5_9BACT Length = 533 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 79/355 (22%), Positives = 133/355 (37%), Gaps = 39/355 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P E L ++ R HA L G+G +L L++ L C Sbjct: 9 KYRPQNFKEVYAQEHITEILQSAIATNRIAHAYLFTGPRGVGKTSLARILAKSLNCVNGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C + AGT PD + G + VD +RE+ +L A K+ + Sbjct: 69 TTTPCNACSNCLEITAGTSPDVIEI---DGASNTSVDDIRELQRELLYPASSSNYKIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F AT EP+++L T+ SRC+ + P V Sbjct: 126 DEVHMLSKNAFNALLKTLEEPPDNVIFIFATTEPQKVLPTIISRCQRYDFKRIPIASIVQ 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNW----QARETLCQALAYSVP 225 L + + ++L R + G AL+L + + +P Sbjct: 186 RLQEISVLEGIKIDSESLYLIARKADGGMRDALSLMDQAISYCLNNITIDKVRQIFGMIP 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQV------------------TN 267 + + L + ++ ++ L + + A + N Sbjct: 246 NQVYQKFLTLIYNKDTQGLINELHLIFEQGIDLQEFIANMQEFVRILILRKLQVQIKDIN 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 D L ELA ++L IL + R L + N L++ L++++ Sbjct: 306 PDELSLFDELAELFGQNKLLYILSYLIACRNDLRGSS--NPYLILEALMIKLCKL 358 >UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 Tax=Bacillales RepID=C6CST5_PAESJ Length = 590 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 124/355 (34%), Gaps = 40/355 (11%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P R + L + + R HA L G G L++ + C++ Sbjct: 10 WRPQTFQDMVGQRHIIQTLQNAIREDRVSHAYLFNGPRGTGKTTAAKVLAKAVNCERGPA 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + AG D + + G+D +R++ +K+ KV + Sbjct: 70 EEPCNECDACRGITAGHIMDVIEI---DAASNRGIDEIRDIRDKVRYAPSEVRYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP F LAT EP +L AT+ SRC+ + Sbjct: 127 EVHMLTSEAFNALLKTLEEPPGHVIFILATTEPHKLPATIISRCQRFDFRQVSLEEQSER 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPS 226 L + +DA+ RLS G A++L + + + + + Sbjct: 187 LFEICRDEGIEAEEDAIAYIARLSEGGMRDAISLLEQVAAFGGSRITLDGAVDVTGGMAA 246 Query: 227 GDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNVD 269 +Y+L A+ A + L D L Sbjct: 247 DQFYALAEAIRDRNVAAIMPLVEGLTQAGKSADKCMENLIFYFRDLLVLKLAPQGAVTER 306 Query: 270 V--PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 V +A+ S RL ++ + + + + L L++I Sbjct: 307 VVDAERFRGMADAFSSERLFKMIDTLNTYQSDMK--HASQPQTLFEVALMKICTI 359 >UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 Tax=Bacteria RepID=C9L9Q0_RUMHA Length = 538 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 128/359 (35%), Gaps = 45/359 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L +A R HA L G G + L+R + C+ P Sbjct: 9 KFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKILARAVNCEHPV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C+ C+ + GT + + + GVD +RE+ E++ G KV + Sbjct: 69 DGSPCNTCKTCRAINEGTSMNVIEI---DAASNNGVDNIREIREEVAYRPTTGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP+ F LAT E ++ T+ SRC+ + Sbjct: 126 DEVHMLSTGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRITADTIAA 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG------DNWQARETLCQALAYS 223 L + + A+ + + GS AL+L E + + L + Sbjct: 186 RLQELMDKEGNDVEEKAIRYIAKAADGSMRDALSLLDQCIAFYLGEKLTYEKVLENL-GA 244 Query: 224 VPSGDWYSLLAALNHEQ-----------------APARLHWLATLLMDALKR----HHGA 262 V + + +L + + + L + L H Sbjct: 245 VDTQVFSRMLRQILQQDTAGTIKTLDEIIIQGRELGQFVTDFIWYLRNLLLISTSEHPEE 304 Query: 263 AQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 A + + + E ++ + L + + Q+ + + +L+ L+++ Sbjct: 305 AVDASAENLERMKEESSMVDAETLMRYIRIFSELSNQIKYASQ--KRVLVEIALIKLCQ 361 >UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB01_KANKD Length = 773 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 86/350 (24%), Positives = 134/350 (38%), Gaps = 37/350 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ-QP 53 +W P LV + ++GR HHA L G+G + LS+ L C+ Sbjct: 9 KWRPKNFDELQGQEHVSRALVNAIESGRLHHAYLFTGTRGVGKTTIARILSKCLNCETNG 68 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 K CG C C + G D + + VD RE+ E + G KV Sbjct: 69 LTSKPCGECGSCVEIDEGRFVDLIEV---DAASRTKVDDTRELLENVQYKPTRGRYKVYL 125 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L++++ NALLKTLEEPP F LAT +P++L T+ SRC +L EQ Sbjct: 126 IDEVHMLSNSSFNALLKTLEEPPEHVIFLLATTDPQKLPVTVLSRCLQFHLKHMEEQTIS 185 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 L + AL R + GS AL+L + +E + + ++ Sbjct: 186 KHLAYILQQESIDFETPALELISRSAEGSMRDALSLLDQAIAFGQGKVQEEDIRTMLGTI 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATL------LMDALK---------RHHGAAQVTNVD 269 LL AL ++ + + +A + DALK + V Sbjct: 246 DHQFMVKLLEALANKDSAEAIKAVAEMSHYPVDFADALKELLSRIHQVAIFQSTGVLLDQ 305 Query: 270 VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 V + A+ ++ LQ H R L + + LLR+ Sbjct: 306 AAPYVEDFASKIASDDLQLYYQMGLHARRDLEWAP--SPRQGLEMALLRM 353 >UniRef50_D0WGG2 DNA polymerase III, subunit gamma and tau n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGG2_9ACTN Length = 862 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 85/369 (23%), Positives = 140/369 (37%), Gaps = 44/369 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + + ++ R HA L G G + L++ LLC++ Sbjct: 8 KYRPQTFDDVVGQIHIERTIKNALESDRVSHAYLFCGPRGTGKTTMARLLAKALLCEKGP 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 G C C + GTHPD + + GV+ VRE + ++ G K+ Sbjct: 68 TPAPDGECEQCLAIAEGTHPDVNEM---DAASRTGVENVREEIIGRVQFAPVRGRYKIYI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ AA NALLKTLEEPP+ F L T +P ++ AT+ SRC+ + + Sbjct: 125 IDEVHMLSTAAFNALLKTLEEPPSHVVFILCTTDPHKVPATIHSRCQRFDFHRLANEEII 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 L S V +AL A + + G AL + + + + ++ Sbjct: 185 ARLGAVCASEGVEFEAEALELAAKRAQGGMRDALTTLEQLIAFGEGRVTMQVALDVLGAL 244 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDA--LKRHHGAAQV 265 S D ++A + A A W LA+ + D GA + Sbjct: 245 DSNDMTDIVARIARRDAAACFTWVAEYVETGADLAQFARDLASYVRDLYAFILTDGALEP 304 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + +A A P RL +L + + +L S N L L R+ +P Sbjct: 305 RSSATNEQLAAQAGLFGPDRLAHVLSILGDVCAELRSSA--NPRLSFEIALTRMA---RP 359 Query: 326 GVVLPVPHL 334 L + L Sbjct: 360 ESDLTLASL 368 >UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridiales RepID=C4ZB56_EUBR3 Length = 523 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 126/358 (35%), Gaps = 43/358 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L +A R HA L G G + ++ + C+ P Sbjct: 9 KFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTVAKIFAKAVNCEHPV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G+ + + + GVD +R++ E++ G KV + Sbjct: 69 DGSPCGECPSCRAITEGSSMNVIEI---DAASNNGVDNIRQIREEVTYRPTEGRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP+ F LAT E ++ T+ SRC+ + + Sbjct: 126 DEVHMLSAGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFHRISIDTIAS 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD-----NWQARETLCQALAYSV 224 L V + + A+ + GS AL+L + + +V Sbjct: 186 RLSDLMEQEHVEVEERAIRYVAKAGDGSMRDALSLLDQCIAFHLGEKLTYENVLEVLGAV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAAQV-- 265 + + LL + E + L L + + L Sbjct: 246 DTEVFSRLLRRILDEDVTGAIRILGELIDEGRELSQLVNDFTWYMRNLLLLQSSDDMEEV 305 Query: 266 --TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 + D + E A + P L + + Q+ + + +++ ++++ Sbjct: 306 LDISKDNLEALKEEAALVKPETLIRYIRVFSELSSQVKFASQ--KRIMVEIAIIKLCR 361 >UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q1QXJ7_CHRSD Length = 723 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 81/366 (22%), Positives = 129/366 (35%), Gaps = 40/366 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + LV + GR HHA L G+G L L++ L C+Q Sbjct: 9 KWRPRTFHELVGQEHVSRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAKCLNCRQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ RE+ + + G KV + Sbjct: 69 TSVPCGECETCREIDEGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L P + V Sbjct: 126 DEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFTLKNMPPERVVG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + V + AL + + GS A++L + R A+ ++ Sbjct: 186 HLSHILQAESVAYDEQALWLLGKAADGSMRDAMSLTDQAIAFGQGEVRHADVAAMLGTLD 245 Query: 226 SGD---------------WYSLLAALNHE--QAPARLHWLATLLMDALKRHHGAAQVTNV 268 +A+L + L LA + + N Sbjct: 246 HRHLLALAEALAEVDAARVLQEVASLAEQGPDFGGILDDLAGIFHRLAIAQMVPDALDNG 305 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + LA + +Q R + S + + LLR+ +P Sbjct: 306 HGDRDTLLPLAARFTAEDVQLYYQIALQGRGDMESAP--DPRTALEMTLLRML-AFRPQG 362 Query: 328 VLPVPH 333 V P Sbjct: 363 VPKPPQ 368 >UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Tax=Reinekea blandensis MED297 RepID=A4BJR3_9GAMM Length = 677 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 83/369 (22%), Positives = 135/369 (36%), Gaps = 41/369 (11%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + LV + R HHA L G+G + L++ L C+Q Sbjct: 9 KWRPGTFDEMVGQVHVLKALVNALDQERLHHAYLFTGTRGVGKTTIARLLAKSLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C+ + G D + + V+ RE+ E + G KV + Sbjct: 69 SSKPCGQCASCREIAEGRFVDLIEV---DAASRTKVEDTRELLENVQYAPTRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L ++ V Sbjct: 126 DEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKNMSREHIVQ 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ +V + +L A + GS AL+L + E A+ +V Sbjct: 186 HLNHILTVEQVPFDEPSLWAIAEGAQGSMRDALSLTDQAIAFGHGALAEQEVAAMLGTVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAAQVTNV 268 +L+ AL + A L ++ L L + ++N Sbjct: 246 LKRVLNLVRALLQKDADGLLAMVSELDEHTPDYQTLLTELMSTLHRVAIAQAVPSAISNH 305 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIE--HYLQP 325 + LA +Q + +L + LLR+ P Sbjct: 306 KGDRDAIMALAKAGYAEDIQLYYQIAGKSKGELSLAP--SERAGFEMTLLRMLAFSQTPP 363 Query: 326 GVVLPVPHL 334 + +P L Sbjct: 364 SSIDTLPPL 372 >UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina loihiensis RepID=Q5QWS2_IDILO Length = 681 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 76/351 (21%), Positives = 124/351 (35%), Gaps = 38/351 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + R HHA L G+G + L++ L C++ Sbjct: 9 KWRPSQFAEVVGQQHVLKPLEHALDKQRLHHAYLFTGTRGVGKTTIARILAKALNCEEGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C ++ G D + + V+ RE+ + + G KV + Sbjct: 69 TATPCGKCSACLEIEQGRFVDLLEI---DAASRTKVEDTRELLDNVQYRPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKALSNDDITQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 L +V +AL R + GS AL+L + + +VP Sbjct: 186 QLSYVLSQEQVQADSEALPLLARSARGSMRDALSLTDQAIAQGGGSVSIDSVRRMLGNVP 245 Query: 226 SGDWYSLLAALNHEQAPARLH-----------------WLATLLMDALKRHHGAAQVTNV 268 D +LL ++ A A + L +LL + Sbjct: 246 VADIAALLESVLEGDAEAVMQRVDSMVSMVPDLSSVLVELQSLLHQLALVQQVPSAANVF 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + ++ L + +Q V R + I+ + LLR+ Sbjct: 306 ENSDVLKPLLRRMPAELIQVFYRTVLEGRRE--QAYAIDARSGLEMTLLRL 354 >UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=2 Tax=Psychrobacter RepID=A5WFF8_PSYWF Length = 751 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 88/360 (24%), Positives = 132/360 (36%), Gaps = 43/360 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + L+ + R HHA L G+G + LS+ L C+ Sbjct: 11 KYRPKNFHELVGQSHVSKALINAIDHNRLHHAYLFTGTRGVGKTTIARILSKCLNCETGV 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + V+ RE+ + + G KV + Sbjct: 71 TSTPCGVCSSCVAIDQGRFIDLIEI---DAASRTKVEDTRELIDNVPYAPTQGRYKVYLI 127 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPPA F LAT +P++L T+ SRC L P P+Q Sbjct: 128 DEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPLPQQALSD 187 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 + + +Q AL + GS AL+L + + + + Sbjct: 188 HIANLLTQENIDFTQPALWQLANAAKGSVRDALSLTDQAIAFGQGRLTDETVNDMLGLID 247 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHH--GAAQVT 266 S D SLL + APA LA LL + Sbjct: 248 SADLISLLLDIYQGNAPALSAHIEQMRAQLVDAGSMFDGLADLLHQIAMVQLLPNVSLNV 307 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINREL-LITDLLLRIEHYLQP 325 N + LA + P LQ V REQ+ N L + LLR+ +P Sbjct: 308 NDLQAQQITALAAQIGPDVLQLYYQIVIQGREQIKLA---NTPLQALEMCLLRLL-AFRP 363 >UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 Tax=Pasteurellaceae RepID=A6VMZ2_ACTSZ Length = 699 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 82/362 (22%), Positives = 134/362 (37%), Gaps = 36/362 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G ++ L++ L C Sbjct: 9 KWRPQNFHQVIGQEHILTALANGLKENRLHHAYLFSGTRGVGKTSIARLLAKGLNCIHGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ ++ G D + + V+ RE+ + + G KV + Sbjct: 69 TAEPCGECEHCKAIENGNFIDLIEI---DAASRTKVEDTRELLDNVQYKPVQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L +Q Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALSQQQIAQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L ++ AL + + GS +L+L N R + + + Sbjct: 186 HLANILTQEKIPFEPTALGKIAKAAQGSVRDSLSLTDQAIAMSNADIRVDVVNIMLGLLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLA----------TLLMDALKRHHGAAQVTN----VDVP 271 +L AL+ + + LL++ + H A + +D Sbjct: 246 DNQPIEILYALHQGNGEKLMQGIQAVADNGADWDELLIEVGEALHQIAMLQLLPNRIDEE 305 Query: 272 GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPV 331 + LA H+SP +Q V R++L NR + LLR P Sbjct: 306 SQLGFLAKHISPENIQFFYQIVTMGRKEL--AFAPNRRIGAEMTLLR-ALAFHPKFSRAE 362 Query: 332 PH 333 P Sbjct: 363 PA 364 >UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A300_NATTJ Length = 589 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 80/354 (22%), Positives = 127/354 (35%), Gaps = 41/354 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HA L G G ++ ++ L C Q Sbjct: 9 QWRPKYFRDLVGQEHVVTTLKNAISQSRISHAYLFSGPRGTGKTSVAKVFAKALNCDHSQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 ++ CG C C GT D + + G+D +RE+ + + G KV V Sbjct: 69 DNEPCGQCSRCIEHDRGTFMDILEI---DAASNRGIDEIREIRDHVAYSPSEGNYKVYIV 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F LAT EP +L T+ SRC+ Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPDYVIFILATTEPHKLPMTVLSRCQRFDFYRLSTSKIEK 185 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQG------DNWQARETLCQALAYS 223 L ++ ++++L + S G AL+L Q + + + Sbjct: 186 QLQNVIDSKNLSATKESLSIIAKKSDGGMRDALSLLDQSLSFLGSGEQLKVDHVLEVTGT 245 Query: 224 VPSGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHH-GAAQV 265 V +Y LL AL L+ + L L D L G + Sbjct: 246 VSEDTFYDLLMALKEGDLAQILNIVQQLSDSGKDFGQFLNDLIVYLRDLLLFKLKGPSDQ 305 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 V +L + + L +++ + ++ + NR L++ RI Sbjct: 306 LLWGSVDSVKKLHKYFTKDELISMIDFLSEKQQAMKWSQ--NRRLIVEMAFYRI 357 >UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 Tax=Proteobacteria RepID=A0KY06_SHESA Length = 1040 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 80/350 (22%), Positives = 123/350 (35%), Gaps = 38/350 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C++ Sbjct: 9 KWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEKGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TASPCGVCGSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L +Q T Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPKHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQQEIGT 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +AL + + GS AL+L Q++ S+ Sbjct: 186 QLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSMLGSID 245 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 LL AL A L L LL A Sbjct: 246 EQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPAAAQQS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 + A L+P ++Q + R+ L + + + LLR Sbjct: 306 LYSAQIQAFAEQLAPEQVQLYYQILLTGRKDL--PHAPDPKSGLEMALLR 353 >UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15RT3_PSEA6 Length = 914 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 75/364 (20%), Positives = 125/364 (34%), Gaps = 40/364 (10%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + R HHA L G+G + S+ L C+ Sbjct: 9 KWRPNNFSELVGQEHVVAAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSKSLNCELGM 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G K CG C C ++ G D + + V+ RE+ + + G KV + Sbjct: 69 GSKPCGKCSTCVEIEQGNFVDLLEI---DAASRTKVEDTRELLDNVQYRPSRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSRAQIAQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 L ++ + +AL R + GS AL+L N ++ + + Sbjct: 186 QLQHVFAQEQLQNAPEALAQIARAAQGSMRDALSLSDQAIAQGNGNVSLSIVTDMLGLMD 245 Query: 226 SGDWYSLLAALNHE-----------------QAPARLHWLATLLMDALKRHHGAAQVTNV 268 LL A+ ++ L+ L +LL Sbjct: 246 KTQVLKLLNAVLNKQNESVFELVDFMSEQAVDYSQVLNELMSLLHQVALTQFVPDACKLE 305 Query: 269 DVPGL-VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + + +LA + P +Q + + + + + LLR+ P Sbjct: 306 TISARAIYQLAKNALPEHIQLLYQIALQGKRDM--PFAADARTGLEMTLLRML-AFSPVQ 362 Query: 328 VLPV 331 V Sbjct: 363 VNTS 366 >UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 Tax=Shewanella RepID=Q12LL5_SHEDO Length = 921 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 80/361 (22%), Positives = 125/361 (34%), Gaps = 38/361 (10%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+ Sbjct: 9 KWRPAKFEQMVGQSHVLLALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TASPCGTCSSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L + Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLSQDEISQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ AL + + GS AL+L + Q T Q + S+ Sbjct: 186 QLEFILGQEQLPFESQALTLLAKAANGSMRDALSLTDQAIAFGSGQVMLTQVQTMLGSID 245 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 LL +L A L L LL A + Sbjct: 246 ERQVIGLLKSLCDADIAHLMQTTAQVLSFGADADEVLRSLLELLHQITLSQFAPAAAQHS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 + A L P ++Q + R++L + + + LLR ++ V Sbjct: 306 LYSEQILAFAKQLKPEQVQLYYQILLTGRKEL--AFAPDPKSGLEMALLRAVAFVPEKTV 363 Query: 329 L 329 Sbjct: 364 N 364 >UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG9_9FIRM Length = 587 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 71/356 (19%), Positives = 125/356 (35%), Gaps = 42/356 (11%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + R HA L G G ++ ++ L C Q Sbjct: 9 KYRPSNFDEVVGQTHIIQTLKNAIIQNRIAHAYLFCGPRGTGKTSIAKIFAKTLNCTNSQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C++ G+HPD + + GVD VR + +K+ G K+ + Sbjct: 69 DA-PCGVCENCKMAANGSHPDIIEI---DAASNNGVDEVRNLIDKVKYAPMQGKYKIYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + ++T A NALLKT+EEPPA F AT EP ++L T+ SRC+ Sbjct: 125 DEVHMMTSGAFNALLKTIEEPPAHVIFIFATTEPNKVLPTIISRCQRFDFNKVSVNDIKY 184 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNW----QARETLCQALAYSVP 225 LS + + QD L +L+ G AL++ + + + Sbjct: 185 RLSVVCKNEGIEIDQDGLTLIAQLADGGMRDALSILDQCVAYCTSHIDVNDIRKIYGVIT 244 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAAQVTNV 268 S D L +++ + + + L D+L + Sbjct: 245 SEDIGQLFSSIYKKDVDRFIKDIQKYSDMGMDIKRLTADFIHMLKDSLILDYSENSTLVS 304 Query: 269 DV-PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINREL-LITDLLLRIEHY 322 D+ ++ + + ++ + + L + LL+I Y Sbjct: 305 DMNKDMIRKYFKSAPIHFRIQCMEELMDTYNKYTYASNA---LDYLEASLLKISSY 357 >UniRef50_C9PPQ1 DNA polymerase III subunit gamma/tau n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PPQ1_9PAST Length = 741 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 73/359 (20%), Positives = 125/359 (34%), Gaps = 37/359 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G ++ ++ L C Sbjct: 9 KWRPKTFADVVGQSHILIALSNGLKENRLHHAYLFSGTRGVGKTSIARLFAKGLNCVNGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ ++ G D + + V+ RE+ + + G KV + Sbjct: 69 TAEPCGECEHCKAIEEGRFIDLIEI---DAASRTKVEDTRELLDNVQYKPVQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALEQTQIAQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L + AL + + GS +L+L N + + + Sbjct: 186 HLEFILKQESIPFDFLALEKLAKAAQGSIRDSLSLADQAIAMSNGNITLNVVNEMLGLLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLA----------TLLMDALKRHHGAAQVTN-----VDV 270 +L L + + L D ++ H A +D Sbjct: 246 DNQAIDILYTLQQGNGENMMKIIQAIAEKGSDWDLFLRDIAEKLHQIAVKQLLPKDRLDE 305 Query: 271 PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVL 329 + LA ++P LQ + R++L + + LLR P ++ Sbjct: 306 SNQLDFLATLITPDDLQFFYQVIVAGRKEL--AFSPTPRIGVEMTLLR-ALAFHPKLIN 361 >UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 Tax=Staphylococcus RepID=B9DLF5_STACT Length = 583 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 124/349 (35%), Gaps = 30/349 (8%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P D + L + G+ HA + G G ++ ++ + C Sbjct: 10 YRPQSFDDVVGQEHVTKTLRNAIAKGKQSHAYIFSGPRGTGKTSIAKVFAKAINCPNSVD 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G++ D + + GVD +R + +K+ KV + Sbjct: 70 GEPCNECDICKSITQGSNSDVIEI---DAASNNGVDEIRNIRDKVKYAPSQSKYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPPA F LAT EP ++ T+ SR + + Sbjct: 127 EVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGLDQIIER 186 Query: 176 LS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVPS 226 L + + +A+ + S G AL++ E L + SV Sbjct: 187 LRYVAESQHIEYDDEAIAFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALNVTGSVDE 246 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANH------ 280 +LL + + Q + + + + + ++ + A Sbjct: 247 ASLNALLNDVANGQVKDAFARYHQFIAEGKEVNRLINDLIYFVRDTIMNKTAQRETEYDA 306 Query: 281 ---LSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 L ++ + + +N+ + LL+++ ++ G Sbjct: 307 LMAFDLDTLYKMIDLINDTLVSVR--FSVNQNVHFEVLLVKMAELIKEG 353 >UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W2_EUBE2 Length = 561 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 125/361 (34%), Gaps = 46/361 (12%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L A R HA L G G ++ ++ + C+ P Sbjct: 25 KWRPDNFNDVKGQDTIVTTLRNQINADRIGHAYLFCGTRGTGKTSVAKIFAKAVNCEHPV 84 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + AGT + + + GVD +R++ E++ G KV + Sbjct: 85 DGNPCGECPTCKAIAAGTSMNVIEI---DAASNNGVDNIRQIREEVQYSPTEGRFKVYII 141 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPPA F LAT E ++ T+ SRC+ + + Sbjct: 142 DEVHMLSIGAFNALLKTLEEPPAYVIFILATTEVAKIPITILSRCQRYDFHRITIETIAG 201 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD-----NWQARETLCQALAYSV 224 L + + + A+ + + GS AL+L + + +V Sbjct: 202 RLSELMKAEGLNVEDKAIKYVAKAADGSMRDALSLLDQCLAFYLGKDLKYENVLDVLGAV 261 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAAQ--- 264 + + +L+ + + + L L + L Sbjct: 262 DTAVFSKMLSTILSGDVAVCMSLMEDLIMQGRDLSQFVTDFIWYLRNLLLIKTTKDAERI 321 Query: 265 ----VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIE 320 + D + + A ++ L + + + L T + + +++ Sbjct: 322 EDVIEVSADNLEDLKKDAQNVDIDTLMYYIRVLSELSNDLKFSTQ--KRVKTEITFIKLM 379 Query: 321 H 321 Sbjct: 380 R 380 >UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 Tax=Proteobacteria RepID=A3NA70_BURP6 Length = 826 Score = 372 bits (956), Expect = e-102, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 127/352 (36%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L G+G L ++ L C+ Sbjct: 9 KWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAKALNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG CR C+ + G DY + + GVD + + E+ KV + Sbjct: 69 TSQPCGVCRACREIDEGRFVDYVEM---DAASNRGVDEMAALLERAVYAPVDARFKVYMI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NA+LKTLEEPP F LAT +P+++ T+ SRC L P + V+ Sbjct: 126 DEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPAGHIVS 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNW----QARETLCQALAYSVP 225 L + AL R + GS AL+L + ET + ++ Sbjct: 186 HLERILGEERIAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTETAVSGMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNV 268 LL AL P L LA+LL A V + Sbjct: 246 QTYMVRLLDALAAADGPQILAVADEMALRSLSFSAALQDLASLLHRIAWAQFAPASVLDE 305 Query: 269 -DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + A LSP ++Q R +L T LLR+ Sbjct: 306 WPEAADLRRFAELLSPEQVQLYYQIATVGRGELGLAPDEYA--GFTMTLLRM 355 >UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteria RepID=B8FG14_DESAA Length = 706 Score = 372 bits (956), Expect = e-102, Method: Composition-based stats. Identities = 78/359 (21%), Positives = 124/359 (34%), Gaps = 42/359 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + E L + R HAL + G G + L++ + C Sbjct: 9 KYRPQTFDEVVAQPHITETLKNAINQERVAHALCLSGPRGTGKTTVARILAKAMNCVNGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + A D + + G + V+ VRE+ E + LG KV + Sbjct: 69 TPEPCGVCASCKEIAASNAVDVFEI---DGASNNSVEQVRELRENVQYAPALGNYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPP F LAT E ++ T+ SRC+ + V Sbjct: 126 DEVHMLSQAAFNALLKTLEEPPPHVMFILATTESHKIPVTILSRCQRYDFKRISLDDIVG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ T+ + +L A R S G AL+L +A + Sbjct: 186 HLAKLAGLENFTIEEQSLWAVARRSGGCMRDALSLLDQVMAYSTGEASFEKVLDILGVAG 245 Query: 226 SGDWYSLLAALNHEQAP-----------------ARLHWLATLLMDALKRHH----GAAQ 264 ++L AL P + L L D G Sbjct: 246 RKSLFALAQALLDRDVPACLTAVDQLYARGYDLKQVMADLLDHLRDLTVVKTVRDPGPLL 305 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 + E + SP+ + +L + + L + L+RI Sbjct: 306 DIPPGEIQAMQEQVANASPAFVNQVLSLLFKEEAAVRLSPQ--PRLALEVALIRICEIT 362 >UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYL7_9GAMM Length = 697 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 82/359 (22%), Positives = 137/359 (38%), Gaps = 41/359 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + L+ + R HHA L G+G + L++ L C+ Sbjct: 8 KYRPKNFHELLGQEHVSKALINAIHNQRLHHAYLFTGTRGVGKTTIARILAKCLNCETGV 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C CQ + +G D + + V+ RE+ + + G KV + Sbjct: 68 TSEPCGVCGVCQSIDSGRFIDLIEI---DAASRTKVEDTRELLDNVPYAPTQGRYKVYLI 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPPA F LAT +P++L T+ SRC L P P+ Sbjct: 125 DEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPLPQVALAE 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 +L +++ DAL + GS AL+L N + + + + + Sbjct: 185 YLGTILNKEQISYESDALWQLSSSAKGSVRDALSLTDQAIAFGNGNVTDEVIRQMLGLID 244 Query: 226 SGDWYSLLAALNHEQAPAR---LHWLATLLMDA----------------LKRHHGAAQVT 266 D ++LA + + + L ++DA L+ Sbjct: 245 QADVIAILANIYQQNTQQLTQSIQLLREQVVDAKAVFDRLAETLHQLAILQALPNFDLQI 304 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 N + +LA L LQ V RE L + + LLR+ +P Sbjct: 305 NRQQSEQLQQLAQKLPAELLQLYYDIVVKSRENLALANTPMQ--ALEMCLLRLM-AFKP 360 >UniRef50_Q13Z80 DNA-directed DNA polymerase n=48 Tax=Burkholderiales RepID=Q13Z80_BURXL Length = 957 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 88/352 (25%), Positives = 128/352 (36%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L G+G L ++ L C+ Sbjct: 9 KWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAKALNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG CR C+ + G DY + + GVD + + E+ KV + Sbjct: 69 TSTPCGVCRACREIDEGRFVDYVEM---DAASNRGVDEMAALLERAVYAPVDARFKVYMI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NA+LKTLEEPPA F LAT +P+++ T+ SRC L P + V+ Sbjct: 126 DEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPAGHIVS 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNW----QARETLCQALAYSVP 225 L +V AL R + GS AL+L Q E + + ++ Sbjct: 186 HLEHILGEEKVPYDVQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGMLGALD 245 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTNV 268 LL AL A L LA+LL + V + Sbjct: 246 QSYLIRLLDALADGDGAAVLSVADEMALRSLSFSTALQDLASLLHRIAWAQFAPSSVLDE 305 Query: 269 -DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 G + A LS ++Q R +L T LLR+ Sbjct: 306 WPEAGDLRRFAEALSAEQVQLFYQIATIGRSELGLAPDEYA--GFTMTLLRM 355 >UniRef50_Q0A8H8 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q0A8H8_ALHEH Length = 648 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 81/352 (23%), Positives = 122/352 (34%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P LV + + R HHA L G+G + L++ L C+Q Sbjct: 9 KWRPRTFSEMAGQEHVLRALVNALEQQRLHHAYLFTGTRGVGKTTVARILAKCLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + AG D + + V+ RE+ + + G K+ + Sbjct: 69 TAEPCGTCDACRELDAGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTRGRYKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L P Sbjct: 126 DEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKNLPGGLVAD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 +L V AL + + GS AL+L RE A+ ++ Sbjct: 186 YLHTVVEQEGVAAEPQALARLGQAAKGSMRDALSLLDQAIAFGAGAVREDEVCAMLGTID 245 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNV 268 G L AL A L L L + Sbjct: 246 RGFVLEALEALAAGDGRALLAVTARMSERAPDFSDALDELLHCLHQLALLQVVPEALPAG 305 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D + +LA L +Q + R L +LLR+ Sbjct: 306 DPDADRLRDLAARLPAEDVQLYYQIALNGRRDLPLAPEG--RTGFEMVLLRM 355 >UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MH32_BDEBA Length = 621 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 76/361 (21%), Positives = 126/361 (34%), Gaps = 43/361 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + + GR HALL G G + L++ L C Q Sbjct: 25 KWRPQSFTDVVGQNHITQTLSNALKNGRLPHALLFTGPRGTGKTSSARILAKALRCPNAQ 84 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C + G+ D + G + GVDA+RE+ + + G K+ + Sbjct: 85 NFVPCNDCYSCNEIAGGSSIDVIEI---DGASNNGVDAIRELRDTVAFMPSSGKYKIYII 141 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NALLKTLEEPPA F +AT E ++ T+ SRC+ + Sbjct: 142 DEVHMLSTSAFNALLKTLEEPPAHVVFIMATTEVHKIPQTILSRCQRFDFRRISTRSITE 201 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L VT +AL R GS + +L N + Sbjct: 202 RLKLICDREGVTADDEALWVVARQGDGSMRDSQSLLDQVITFANGPLTRASVVEILGLTD 261 Query: 226 SGDWYSLLAALNHEQAPARL-----------------HWLATLLMDALKRH----HGAAQ 264 + L AL + A L L ++ + L + Sbjct: 262 RALLFETLNALIDRNSQAVLKVIEKIAAAGFEPHLYSQDLLEMIRNLLLIKVSEAQASQI 321 Query: 265 VTNVD-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 + D ++E+A L + + + + +++ LLR+ Sbjct: 322 LEMPDSELQALSEMAQRLPEEDIHMLFDMALKGGSDIPRAQ--DPRIVLEVTLLRMASAP 379 Query: 324 Q 324 + Sbjct: 380 K 380 >UniRef50_B5FFM6 DNA polymerase III subunit tau n=2 Tax=Vibrio fischeri RepID=B5FFM6_VIBFM Length = 709 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 77/366 (21%), Positives = 130/366 (35%), Gaps = 40/366 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G + ++ L C++ Sbjct: 9 KWRPHHFKDVVGQPHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAKGLNCEEGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ RE+ + + G KV + Sbjct: 69 TSTPCGVCSTCKEIDEGRFVDLLEI---DAASRTKVEDTRELLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKHISVDQIHE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L EV+ AL + GS AL+L N + A+ ++ Sbjct: 186 QLDFVLDKEEVSKEARALGLIAHAADGSMRDALSLTDQAIALGNGSVTAEIVSAMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVP-------------- 271 + +L A++ + ++ + L ++ A ++ N Sbjct: 246 TDQAIRILEAISTKNMQTLMNCVNDLADIGVEWDGLAKELANQLHKLAMYQALPATLDKT 305 Query: 272 ----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + L+ LSP +Q V R+ L N +LLR+ +P Sbjct: 306 QPDAERIELLSTQLSPQEVQLFYQIVLQSRKDLPLAP--NERTGAEMMLLRMV-AFRPVH 362 Query: 328 VLPVPH 333 + Sbjct: 363 AQALEA 368 >UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 Tax=Shewanella oneidensis RepID=Q8EFG0_SHEON Length = 1002 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 80/350 (22%), Positives = 122/350 (34%), Gaps = 38/350 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+ Sbjct: 9 KWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TASPCGVCGSCVEIAQGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPTRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L +Q T Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQQEIGT 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +AL + + GS AL+L Q++ S+ Sbjct: 186 QLQHILTQEQLPFEHEALGLLAKSANGSMRDALSLTDQAIAFGGGTVMLNQVQSMLGSID 245 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 LL AL A L L LL A Sbjct: 246 EQHVLGLLKALTDADIGALMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPAAAQQS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 + A L+P ++Q + R+ L + + + LLR Sbjct: 306 LYSAQIQAFAEQLAPEQVQLYYQILLTGRKDL--PHAPDPKSGLEMALLR 353 >UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=root RepID=Q2LYB8_SYNAS Length = 588 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 74/370 (20%), Positives = 126/370 (34%), Gaps = 45/370 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + L + + R HA L G+G ++ L++ + C+Q Sbjct: 9 KWRPQVFEDVVGQQHVVQTLKNAIRQERIAHAFLFSGPRGVGKTSIARILAKAINCEQGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + G D + G + G+D +RE+ E++ KV + Sbjct: 69 AGTPCNVCTNCREITEGISMDVREI---DGASNRGIDEIRELRERIRFLPVSCRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F AT E ++ AT+ SRC+ + Sbjct: 126 DEVHMLTREAFNALLKTLEEPPPHVVFIFATTETHKVPATILSRCQCFEFRRLSLRQIAE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +S L GS + ++F + + L Sbjct: 186 QLRKIAETEKIRISDAGLAWIAEAGDGSMRDSESIFDQVISYAGTAIEDEAVEELLGRTD 245 Query: 226 SGDWYSLLAALNHEQAPARL-----------------HWLATLLMDALKRHHGAAQVTNV 268 + L A+ A L L + L Q + Sbjct: 246 RRFLFQLSEAVLRRDAGQCLRIVEEGYYAGLDMTYFYTLLLHHFRNLLLVKIVGPQQELL 305 Query: 269 DVP----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 D+P + +S LQ +L + E N L + ++ R+ Sbjct: 306 DLPGNDLSGIEAQVAEVSRETLQQLLDILLAEEESARRSH--NPRLHLEAIVCRMAGLP- 362 Query: 325 PGVVLPVPHL 334 LP+ + Sbjct: 363 --PALPIEEI 370 >UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma and tau n=1 Tax=Moritella sp. PE36 RepID=A6FBQ8_9GAMM Length = 814 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 76/365 (20%), Positives = 130/365 (35%), Gaps = 39/365 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + LV + + R HHA L+ G+G + ++ L C++ Sbjct: 9 KWRPHNFQQVVGQQHVLTALVNALEQDRLHHAYLLSGTRGVGKTTIARIFAKSLNCEKGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G + D + + V+ RE+ + + G KV + Sbjct: 69 TSTPCGECSTCVEIDQGCYVDLLEI---DAASRTKVEDTRELLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCLQFHLKCLTTEQISQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L AL + + + GS AL+L + + ++ Sbjct: 186 QLVHILSREHCQYELSALNSIAKAADGSMRDALSLTDQALSHGAGEVLYQTVLDMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPARLH-----------------WLATLLMDALKRHHGAAQVTNV 268 LL + A + LA+LL + V + Sbjct: 246 HSHMLQLLRLIVSGDANKCMAKIAEVSSLGPDFDQLHVELASLLHRIAMAQILPSSVVDT 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 + V L + +SP +Q R++L + + +LR+ +P Sbjct: 306 EHADKVKALCDDMSPEDVQLYYQITLTGRKELPLAP--DPRSALEMTILRML-AFRPQGR 362 Query: 329 LPVPH 333 L P Sbjct: 363 LQAPE 367 >UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 Tax=Neisseria RepID=B4RLX5_NEIG2 Length = 736 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 83/352 (23%), Positives = 135/352 (38%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + GR HHA L+ G+G + L++ L C+ Q Sbjct: 38 KWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAKSLNCENAQ 97 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C + AG + D + + G+D +REV E G KV + Sbjct: 98 HGEPCGVCQSCTQIDAGRYVDLLEI---DAASNTGIDNIREVLENAQYAPTAGKYKVYII 154 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPP F LAT +P ++ T+ SRC L Q Sbjct: 155 DEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTAQQVAD 214 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ ++ AL R +AGS AL+L + + E + + +V Sbjct: 215 HLAHVLDSEKIAYDPPALQLLGRAAAGSMRDALSLLDQAIALGSGKVAENDVRQMIGAVD 274 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL------LMDAL-----------KRHHGAAQVTNV 268 Y LL + ++ A L + +AL + + + Sbjct: 275 KQYLYELLTGIVNQDGEALLAKAQEMAACAVGFDNALGELAILLQQLALIQAVPSALAHD 334 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D ++ LA +S ++Q H + L LLR+ Sbjct: 335 DPDSDILHRLAQTISGEQIQLYYQIAVHGKRDLGLAPDEYA--GFMMTLLRM 384 >UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseriaceae RepID=C5TP18_NEIFL Length = 666 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 84/352 (23%), Positives = 132/352 (37%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + GR HHA L+ G+G + L++ L C+ Sbjct: 9 KWRPKTFADLVGQEHVVKALRNALDEGRLHHAYLLTGTRGVGKTTIARILAKSLNCENAV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C + +G + D + + G+D +REV E G KV + Sbjct: 69 HGEPCGQCESCTQIDSGRYVDLLEI---DAASNTGIDNIREVLENAQYAPTAGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPP F LAT +P ++ T+ SRC L Q Sbjct: 126 DEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPITVLSRCLQFVLRNMTTQQVAE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ V AL R +AGS AL+L + + E + + +V Sbjct: 186 HLAHVLDRENVPYQPQALQLLGRAAAGSMRDALSLLDQAIAMGSGKVAEQDVRQMIGAVD 245 Query: 226 SGDWYSLLAALNHEQAPARLH-----------------WLATLLMDALKRHHGAAQVTNV 268 + LL + ++ A L LA LL + + N Sbjct: 246 KQYLFELLEGIINQNGEALLEKAQEMSARAIGFDSALAELAMLLQRLALIQTIPSALAND 305 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D + L+ LS ++Q H ++ L LLR+ Sbjct: 306 DPERETLLRLSQALSGEQIQLYYQCAIHGKQDLPLAPDEYA--GFVMTLLRM 355 >UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM15_SYNFM Length = 602 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 124/340 (36%), Gaps = 40/340 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + ++ R H+ L G+G ++ L++ L C+ Sbjct: 9 KWRPQTFEEVVGQPHVTRTLQNAIRSSRIAHSYLFTGARGVGKTSIARILAKALNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C ++ G D + G + G+D+VRE+ E + KV + Sbjct: 69 TPTPCNVCSNCTEIRQGNAVDVLEI---DGASNRGIDSVRELRETVRYRPAKSRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F AT EP ++ AT+ SRC+ P V Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPEHVVFIFATTEPHKIPATILSRCQRFDFRRIPSHMLVD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L +V +S+ L A R + GS A +L + +R+ L + + Sbjct: 186 HLRHIAAQEDVALSEGVLYAIAREADGSMRDAQSLLEQMLSFSRDGLSDEEVLDVLGVID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTN------------------ 267 + A+ L + + + Q+ + Sbjct: 246 RRSIHRTGTAVLEGDVRTCLDVVEDIYRRGMDIRRFCRQLCDYFRNLLVVAFGEGDSRRL 305 Query: 268 ---VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 D L+AE A +P L V E++ T Sbjct: 306 DLPSDEKQLLAEAAGKTTPESLYLYFQTVLKSEEEIRRST 345 >UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 Tax=Synechococcus RepID=Q2JLX3_SYNJB Length = 779 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 135/377 (35%), Gaps = 48/377 (12%) Query: 1 MRWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P D + L + + GR A L G G + L++ L C+Q Sbjct: 12 LKYRPQRFADVVGQGAVVQTLANAIRLGRVAPAYLFCGPRGTGKTSSARILAKSLNCEQG 71 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 C C C+ + AG D + + GVD +RE+ E+ KV Sbjct: 72 PTPDPCQACSQCRAITAGASLDVLEI---DAASNTGVDNIRELIERAQFAPVNSRYKVYV 128 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L++AA NALLKTLEEPP F LAT +P+R+L T+ SRC+ P V Sbjct: 129 IDECHMLSNAAFNALLKTLEEPPPRVVFVLATTDPQRVLPTIVSRCQRFDFRRIPLDDMV 188 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG---DNWQARETLCQALAYSVP 225 L + ++ +AL +LS G A L L +P Sbjct: 189 AHLGKIAAQEGIPITPEALQLVAQLSQGGLRDAERLLDQLSLLEGSITPEAVWDLVGGIP 248 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTNV 268 +L+ AL + A L L L D L Q V Sbjct: 249 EQQLLALMDALLAQDVQAVLSQTRQLLERGKEPLALLQNLVALYRDLLLVKTAPQQRELV 308 Query: 269 DVPG----LVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 V + + A S L A + Q+ +L + L+ + L+ Sbjct: 309 AVTDSTWAALQQRAPRYSVEILLAAQSHLRQCEPQIRQSGQ--PQLWLEIALVDLLGQLR 366 Query: 325 PGVV-------LPVPHL 334 P +V P P L Sbjct: 367 PSMVAEDSAERSPFPAL 383 >UniRef50_P43746 DNA polymerase III subunit gamma/tau n=23 Tax=Pasteurellaceae RepID=DPO3X_HAEIN Length = 688 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 81/362 (22%), Positives = 134/362 (37%), Gaps = 37/362 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G ++ ++ L C Sbjct: 9 KWRPKTFADVVGQEHIITALANGLKDNRLHHAYLFSGTRGVGKTSIARLFAKGLNCVHGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ RE+ + + +G KV + Sbjct: 69 TATPCGECENCKAIEQGNFIDLIEI---DAASRTKVEDTRELLDNVQYKPVVGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L E Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKALDETQISQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + AL+ + + GS +L+L + Q + + + Sbjct: 186 HLAHILTQENIPFEDPALVKLAKAAQGSIRDSLSLTDQAIAMGDRQVTNNVVSNMLGLLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLAT----------LLMDALKRHHGAAQVT-----NVDV 270 +L AL+ + L LL + ++ H A + + D Sbjct: 246 DNYSVDILYALHQGNGELLMRTLQRVADAAGDWDKLLGECAEKLHQIALMQLLPQKSSDN 305 Query: 271 PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLP 330 + LA H+SP +Q + R+ L + NR + LLR P + Sbjct: 306 NEHFSFLAKHISPENVQFFYQVIVSGRKDLSNAP--NRRIGAEMTLLR-ALAFHPKFLTA 362 Query: 331 VP 332 VP Sbjct: 363 VP 364 >UniRef50_A3YHQ6 DNA polymerase III subunits gamma and tau n=1 Tax=Marinomonas sp. MED121 RepID=A3YHQ6_9GAMM Length = 823 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 83/353 (23%), Positives = 129/353 (36%), Gaps = 40/353 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ-QP 53 +W P + LV + + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPQNFIELAGQDHVLQALVNALKQQRLHHAYLFTGTRGVGKTTIARIFAKCLNCETNG 68 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + CG C C + G D + + V+ RE+ E + G KV Sbjct: 69 ISPEPCGTCGSCVEIAEGRFVDLIEV---DAASRTKVEDTRELLENVQYTPTRGRFKVYL 125 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ + NALLKTLEEPPA F LAT +P++L T+ SRC L V Sbjct: 126 IDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMSPGRVV 185 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 +L +++ + L + + GS AL+L N ET ++ V Sbjct: 186 NYLEKVLTTEQLSYDEAGLWQIGQAANGSMRDALSLTDQAIAFGNGHISETDVTSMLGLV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATL-------------LMDALKRHHGAAQVTNVDVP 271 LL A+ A L + L L+D L R QV Sbjct: 246 NQAQVVGLLDAIVQSDAANLLKLVNDLADYQPDFVAICASLLDLLHRIAIEQQVPGALED 305 Query: 272 GL-----VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 L V +A + +Q + + L + + LLLR+ Sbjct: 306 QLGDLAKVKLIAQQVPSEVIQLFYQTMLIGKRDLPLAH--SPKAGFEMLLLRL 356 >UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMX9_9BACE Length = 623 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 117/359 (32%), Gaps = 42/359 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + HA L G+G ++ + C P Sbjct: 10 KYRPATFDTVVGQRALTTTLKNAIANQKLAHAYLFCGPRGVGKTTCARIFAKTINCLHPT 69 Query: 55 -GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 ++C C C+ + + L + V+ +R + E++ ++G KV Sbjct: 70 ADGEACNECESCRAFNEQRSYNIHEL---DAASNNSVEDIRSLIEQVRIPPQIGKYKVYI 126 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ AA NA LKTLEEPP F LAT E ++L T+ SRC+++ V Sbjct: 127 IDEVHMLSQAAFNAFLKTLEEPPHHAIFILATTEKHKILPTILSRCQIYDFNRISVNDTV 186 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG--------------------D 208 L + +AL + + G AL++F Sbjct: 187 EHLENVARKEHIEAEPEALNVIAQKADGGMRDALSIFDQVVSFTNGHITYQSVIENLNVL 246 Query: 209 NWQARETLCQALAYSVPSGDWYSLLAALNHE-QAPARLHWLATLLMDALKRHHGAA---Q 264 +++ L A + S + L + L + D L Sbjct: 247 DYEYYFKLTDAFLENRVSDCLLTFNEVLKKGFDGNHFITGLTSHFRDLLVSRDDETLQLL 306 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 + A SP L + L N+ LL+ L+++ Sbjct: 307 EVGASIRDRYQAQAQKCSPQFLYKAMKLCNDC--DLNYRVSKNKRLLVELTLIQLAQLT 363 >UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Coriobacteriaceae RepID=C7MLT3_CRYCD Length = 900 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 93/371 (25%), Positives = 148/371 (39%), Gaps = 47/371 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + + HA L G G + L++ LLC++ Sbjct: 8 KYRPQVFGDVVGQEHIERTLKNAIEQDKVSHAYLFCGPRGTGKTTMARLLAKALLCEKGP 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 + G CR CQ + G HPD Y L + GV+ VRE + ++N G AK+ Sbjct: 68 TSEPDGSCRECQEIAEGVHPDVYEL---DAASRTGVENVREEIIGRVNFAPTRGKAKIYI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ AA NALLKTLEEPPA F L T +P+++ T+ SRC+ + V Sbjct: 125 IDEVHMLSIAAFNALLKTLEEPPAHVVFILCTTDPQKVPETIHSRCQRFDFHRLSNEEIV 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 + L + V +AL + G AL + + + L S+ Sbjct: 185 SRLGAVCVAENVEFEGEALDLIAHRADGGMRNALTALEQLIAFGEGKVTVAGAEDLLGSL 244 Query: 225 PSGDWYSLLAALNHEQAPARLHW----------LATLLMDA-----------LKRHHGAA 263 S D ++AA+ A A W LA D L A Sbjct: 245 DSSDLAEIMAAVGVRDAAACFSWVASYVETGADLAQFTRDMAQQVRNLYVMSLAGTDAAL 304 Query: 264 QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 VT+ + L +EL P+RL +L + + +L + + N+ L L R+ + Sbjct: 305 DVTDAERRELASEL-KLFGPNRLTHLLSILGELSSELRTAS--NQRLAFEIALTRM---I 358 Query: 324 QPGVVLPVPHL 334 +P L + L Sbjct: 359 RPESDLTLEAL 369 >UniRef50_B6EJ42 DNA polymerase III subunit tau n=8 Tax=Vibrionaceae RepID=B6EJ42_ALISL Length = 714 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 74/367 (20%), Positives = 125/367 (34%), Gaps = 40/367 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G + ++ L C++ Sbjct: 9 KWRPHHFKDVVGQSHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAKGLNCEEGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ R++ + + G KV + Sbjct: 69 TSTPCGVCSTCKEIDEGRFVDLLEI---DAASRTKVEDTRDLLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLPVTILSRCLQFHLKHISVDQIHA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L EV+ AL + GS AL+L N + + ++ Sbjct: 186 QLDLVLDKEEVSKDGRALGLIAHAADGSMRDALSLTDQAIALGNGNVTADIVSMMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAAQV-TN 267 + +L A++ + + + L L A + Sbjct: 246 TDQAIRILEAISTKNMQTLMSCINDLADIGVEWDGLAKEIAAQLHKLAMYQALPATLDKT 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + L+ LSP +Q R L + + +LLR+ +P Sbjct: 306 QPDAERIELLSGQLSPQEVQLFYQIALQSRNDLPLAP--TEKTGVEMMLLRMV-AFRPVH 362 Query: 328 VLPVPHL 334 + L Sbjct: 363 AQAIEAL 369 >UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZX2_HALOH Length = 588 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 74/357 (20%), Positives = 128/357 (35%), Gaps = 42/357 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + ++GR HA L G G + + L C Sbjct: 9 KYRPQNFNDLVGQHHVVRTLKNALESGRIAHAYLFAGPRGTGKTSTAKVFAMALNCIHGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ +Q G D + + G+D +RE+ EK+ + G KV + Sbjct: 69 TTEPCGQCENCRKIQKGQSIDVIEI---DAASNRGIDEIRELREKVKFYPNEGEYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP + F LAT EP +++ T+ SRC+ + P + Sbjct: 126 DEVHMLTKGAFNALLKTLEEPPEKVVFILATTEPHQVINTILSRCQRFDFSLLPVREIQE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L EV ++AL R + G A++L L Q + V Sbjct: 186 RLRYICEKEEVEFEEEALNILARSANGGLRDAISLLDQAISYTGNNLNPIDVQGMLGKVS 245 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHH---GAAQV 265 + + + + L L L + + Sbjct: 246 REVLSQFIKYVLNGNSVEALKLVNRIISRGNNVGRLIGDLIEYGRQLLLVKECGPDSRII 305 Query: 266 TNVDV-PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 D ++ A + SRL I+ + + + L++ ++++ + Sbjct: 306 EYPDEVLEKISGEARAIKTSRLIEIIDQLTVMERDIKYSDE--PRLILEVGIIKMAN 360 >UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 Tax=Xanthomonadaceae RepID=B0RYK4_XANCB Length = 752 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 84/363 (23%), Positives = 128/363 (35%), Gaps = 40/363 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + +GR HHA L G+G + ++ L C+ Sbjct: 108 KWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAKSLNCETGT 167 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + AG + D + + GVD VREV E G KV + Sbjct: 168 SADPCGTCPACLDIDAGRYIDLLEI---DAASNTGVDDVREVIENAQYMPSRGKFKVYLI 224 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPP F LAT +P++L T+ SRC L E Sbjct: 225 DEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDEDQIQG 284 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 + + E+ A++ + + GS L+L RE + + + +V Sbjct: 285 QMTRILAAEEIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTMLGTVD 344 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNV 268 ++L AL+ L LA L + + Sbjct: 345 RTQVGAMLQALSDGDGAQLLKVVAALAEFSPDWSGVLEALAEALHRIQVQQLVPSVAFVG 404 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 D A L P +Q + R L + +LR+ +P Sbjct: 405 DGIDP-TGFAAQLRPEVVQLWYQMALNGRRDLYLAP--SPRAGFEMAVLRML-AFRPAAA 460 Query: 329 LPV 331 +P Sbjct: 461 VPA 463 >UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcus oceani RepID=Q3J800_NITOC Length = 529 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 85/351 (24%), Positives = 130/351 (37%), Gaps = 38/351 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L GR HHA L G+G L L++ L C++ Sbjct: 9 KWRPRDFTQVVGQEHVVRALTNGLDKGRLHHAFLFTGTRGVGKTTLARILAKSLNCKEGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C+ CQ + G D + + GVD RE+ E ++ G KV + Sbjct: 69 RSTPCGKCQNCQAIDGGNFVDLIEV---DAASRTGVDDTRELLENVHYAPSRGHYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + + + ++ NALLKTLEEPP F LAT EP++L T+ SRC L + Sbjct: 126 DEVHMFSTSSFNALLKTLEEPPPHIKFLLATTEPKKLPVTVLSRCLQFNLRRITPKAIAE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + E+ AL R + GS AL+L Q + + S+ Sbjct: 186 HLNSILEAEEIPSESYALTLIARAAEGSVRDALSLLDQAINYGRGQVMVADVRTMLGSIE 245 Query: 226 SGDWYSLLAALNHEQAPARLH----------WLATLLMD-------ALKRHHGAAQVTNV 268 GD + LL AL + ++++L D V ++ Sbjct: 246 QGDLFILLDALLAGNGQGLIEKVREICAYSVDISSILADLLHLLQRLALYQLAPDTVDDI 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D G+ + LA +P +Q L + +LLR+ Sbjct: 306 DERGIFSSLAARTTPEEVQLFYQIGLIGSRDLTYAP--DHHTAFEMILLRM 354 >UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S561_SHEAM Length = 909 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 83/361 (22%), Positives = 128/361 (35%), Gaps = 38/361 (10%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 9 KWRPANFAEVVGQSHVLHALTNALGQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + VD RE+ + + G KV + Sbjct: 69 TATPCGQCSACREIAEGRFVDLIEV---DAASRTKVDDTREILDNVQYRPSRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P++L T+ SRC L + Sbjct: 126 DEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKALTQPQIQA 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ + +DAL + +AGS AL+L + R Q + ++ Sbjct: 186 QLAAVLSGEGLGFDEDALSLLAKAAAGSMRDALSLTDQAIAFGGGEVRLAQVQTMLGAID 245 Query: 226 SGDWYSLLAALNHEQAP-----------------ARLHWLATLLMDALKRHHGAAQVTNV 268 G +L AL L L LL A + Sbjct: 246 KGQILNLFDALCQGDIETLLTTARTAMGFGADADEVLRALLELLHQISLAQFAPATASIS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 D V A L P ++Q + R+ L + + LLR ++ V Sbjct: 306 DNGAAVLAWAQALKPEQVQLYYQILLSGRKDLPYAP--DPASGLEMSLLRAVGFVPEKPV 363 Query: 329 L 329 Sbjct: 364 S 364 >UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q0VNM5_ALCBS Length = 615 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 88/356 (24%), Positives = 135/356 (37%), Gaps = 34/356 (9%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L+ + R HHA L G+G + LSR L C+Q Sbjct: 9 KYRPRTFDELVGQEHVSRALMHALDQDRLHHAYLFTGTRGVGKTTIARILSRCLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C CQ + G D + + V+ RE+ + + G KV + Sbjct: 69 SARPCGVCPTCQEITDGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L P + Sbjct: 126 DEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKALPAEQIAG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + ALL+ + + GS AL+L Q A+ +V Sbjct: 186 HLKTLLDKEMIRYDEPALLSLGKAAEGSMRDALSLTDQAIAFGGEQLSSEAVNAMLGTVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL---------LMDAL---KRHHGAAQVTNVDVPGL 273 +LL AL ++ L LA++ L+D L Q Sbjct: 246 RNHVLTLLVALAEQEPGGVLQALASVSEHCPGELALLDELISQLHQLAVCQAVPGSYDET 305 Query: 274 VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVL 329 +LA L+ ++Q R L + + LLLR+ P VL Sbjct: 306 QQQLAAALTAEQIQLYYDVALRGRRDLQDAP--DSRAALEMLLLRMV-LFTPKGVL 358 >UniRef50_A9D7T4 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=A9D7T4_9GAMM Length = 882 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 82/350 (23%), Positives = 121/350 (34%), Gaps = 38/350 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G +L ++ L C+Q Sbjct: 9 KWRPATFEQMVGQSHVLLALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAKGLNCEQGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TASPCGQCSSCVEIAEGRFVDLIEV---DAASRTKVDDTRELLDNVQYRPSRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P+RL T+ SRC L + Sbjct: 126 DEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQDEISA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++T AL + + GS AL+L + T Q + S+ Sbjct: 186 QLSYVLTQEQLTFDHAALTLLAKAANGSMRDALSLTDQAIAFGAGTVQLTQVQTMLGSID 245 Query: 226 SGDWYSLLAALNHEQA-----------------PARLHWLATLLMDALKRHHGAAQVTNV 268 SL AL L L LL A Sbjct: 246 EKHVLSLFNALVQGDIENLMRMIGQILSFGADPEEVLRSLLELLHQITLSQFAPAAAQLS 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 + A LSP ++Q + R+ L + + + LLR Sbjct: 306 IYSEQIKAFAEQLSPEQVQLYYQLLLTGRKDL--PHAPDPKSGLEMALLR 353 >UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0B5_LYSSC Length = 636 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 77/353 (21%), Positives = 134/353 (37%), Gaps = 44/353 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L S + + HA L G G + ++ L CQ P Sbjct: 11 KYRPQGFDNLIGQNHVKNTLENSIKHNKVAHAYLFTGPRGTGKTSAAKIFAKLLNCQSPI 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C CQ ++ D + + GVD +R++ EK+N G KV + Sbjct: 71 DYNPCGECVCCQD----SNTDIIEM---DAASNNGVDDIRDLREKVNYAPAFGKKKVYII 123 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPPA F LAT EP ++ AT+ SRC+ + + V Sbjct: 124 DEVHMLSTAAFNALLKTLEEPPAHIVFILATTEPHKIPATILSRCQRYDFRRISQDDIVH 183 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 + V + + AL +++AG AL+L + + +V Sbjct: 184 RMKTIVEAESVEIEEQALRLISQIAAGGMRDALSLLDQAISKVEGKVTLQDIIEITGAVD 243 Query: 226 SGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDAL--KRHHGAAQVT 266 + +L+ +N L + L D L ++ A + Sbjct: 244 TRKIGTLIQYINQSNIEGALEHFNTCFESGQEPHFFLEEMMIYLRDILVNRKLGEKATLK 303 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 E+AN + P ++ + + + + +LL+ ++ + Sbjct: 304 KGHNDPQFYEIANSVGPDKIYDYMDLLNKAHSNMKFHNDV--QLLMEMTIIEM 354 >UniRef50_B8KYG2 DNA polymerase III, gamma and tau subunit n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KYG2_9GAMM Length = 672 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 80/366 (21%), Positives = 129/366 (35%), Gaps = 40/366 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + LV + R HHA L G+G + L++ L C Q Sbjct: 92 KWRPGNFQEMVGQQHVLRALVNALDNDRLHHAYLFTGTRGVGKTTVARILAKCLNCDQGV 151 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + V+ RE+ E + K+ + Sbjct: 152 SSTPCGTCDSCLEIAEGRSVDLLEV---DAASRTKVEDTRELLENVLYAPTRSRFKIYLI 208 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L AT+ SRC L + V Sbjct: 209 DEVHMLSGHSFNALLKTLEEPPPHAKFLLATTDPQKLPATVLSRCLQFNLKNMVPEEIVA 268 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L V +L R + GS AL+L + E+ +A+ +V Sbjct: 269 HLGKVLEEESVAFDNGSLALLARAAEGSMRDALSLTDQAIGFGDGGLAESDVRAMLGTVD 328 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDALKRHHGAAQVT-NVD----- 269 +L A+ L + + L D H D Sbjct: 329 RARVLDVLDAILDNDPKTLLAVIEQIASHAPDYVATLDDLASVLHQVTIAQWVPDAADPT 388 Query: 270 --VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 +A++A + +Q R ++ + + +LLR+ +P Sbjct: 389 ASQSERIAKVAASTTVDEVQLFYQFAAAGRPEVQRSP--DPRAALEMVLLRMI-AFRPAE 445 Query: 328 VLPVPH 333 V+ H Sbjct: 446 VISDAH 451 >UniRef50_A0YC05 DNA polymerase III subunits gamma and tau n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YC05_9GAMM Length = 588 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 126/354 (35%), Gaps = 33/354 (9%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + L+ + R HHA L G+G ++ L++ L C + CG C C Sbjct: 4 QEHVLKALINALDHNRLHHAYLFTGTRGVGKTSIARILAKCLNCDVGVSSEPCGQCSACL 63 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + G D + + V+ RE+ E + G KV + + +L+ + N Sbjct: 64 SISEGRFVDLIEV---DAASRTKVEDTRELLENVQYAPTAGRFKVYLIDEVHMLSTNSFN 120 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVT 181 ALLKTLEEPP F LAT +P++L AT+ SRC L + V L +T Sbjct: 121 ALLKTLEEPPPHVKFLLATTDPQKLPATILSRCLQFNLKNMSPERIVVHLQNVLEQEMIT 180 Query: 182 MSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPSGDWYSLLAALN 237 + AL R + GS AL+L + + E +++ ++ Y ++ AL Sbjct: 181 YEEPALWLLGRSADGSMRDALSLTDQAISFGSGKLLEADVRSMLGTIDRSAVYEIVEALI 240 Query: 238 HEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNVD-VPGLVAELAN 279 E L L LL N + ++ Sbjct: 241 AENGAQVLAAVNNMAEHAPDYLSALEELLMLLHRIAIAQAVPDATDNSFGDGAKIIAMSA 300 Query: 280 HLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPH 333 L+ Q R L + +LLR+ +P + +P Sbjct: 301 LLTAEDTQLFYQLGLTGRRDLSLAPDL--RSGFEMVLLRML-AFKPAGIPQLPE 351 >UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 Tax=Clostridiales RepID=A9KQC7_CLOPH Length = 522 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 73/357 (20%), Positives = 125/357 (35%), Gaps = 45/357 (12%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L +A R HA L G G + L++ + C+ P Sbjct: 9 KFRPDTFEDVKGQDHIVTTLKNQIKAKRIGHAYLFCGTRGTGKTTVAKILAKTVNCEHPI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ +Q+ + + + + GVD +RE+ E++ G KV + Sbjct: 69 DGNPCNECAMCKAIQSQSSMNVIEI---DAASNNGVDNIREIVEEVKYSPTEGNYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP+ F LAT E ++ T+ SRC+ + Sbjct: 126 DEVHMLSAGAFNALLKTLEEPPSYVIFILATTEVHKIPITILSRCQRYDFRRVTIDEITK 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG------DNWQARETLCQALAYS 223 L + + AL R + GS AL+L + + AL + Sbjct: 186 RLRVITEKEGIEAEEKALRYVARAADGSFRDALSLLDQCIAFYFGQSLTYDNVLDAL-GT 244 Query: 224 VPSGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAA--- 263 V + LL + + L L L + L Sbjct: 245 VDIEVFARLLRYIRKGSVTDCVAILEELIIQGRELTQFTIDFTWYLRNLLLAKTSEDMEE 304 Query: 264 -QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + D L+ + A L + + Q+ T + ++I L+++ Sbjct: 305 ILEMSSDQLQLLKQEAQSCDTELLIRFIRIFSELSNQVKYATQ--KRVMIEVALVKL 359 >UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 Tax=Desulfuromonadales RepID=Q39Q40_GEOMG Length = 582 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 79/359 (22%), Positives = 126/359 (35%), Gaps = 42/359 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L + +GR HA L G+G + L++ L C+Q Sbjct: 9 KWRPQTFSDLTGQEHVSQTLQNAIDSGRIAHAFLFTGARGVGKTSSARILAKALTCEQGM 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C + AGT D + G + GVD +RE+ E + K+ + Sbjct: 69 SPEPCNVCPACTEITAGTAVDVLEI---DGASNTGVDDIRELRENVKYLPSRLRYKIFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F AT EP ++ T+ SRC+ P V Sbjct: 126 DEVHMLSTNAFNALLKTLEEPPPHVKFIFATTEPHKVPITILSRCQRFDFRRIPLGKVVG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + +S +L R GS +L++ Q R+ +L V Sbjct: 186 RLRHIVDQEGIAISDASLTMVARKGDGSMRDSLSVLDQVLAFCGDQVRDEEVVSLLGVVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTNV 268 AA+ L L L + L + Sbjct: 246 RRLLLDATAAVFGRDTRTVLDIVARVDEFGYNMRQFCGELIDHLRNLLILKAVGDGTDLL 305 Query: 269 D----VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 D + + A + LQ L + +L + L++ L+++ Sbjct: 306 DLSEAELATLRQQAESVPLDDLQRHLTVLLRADGELGHTSF--PRLVLEMALVKMATLA 362 >UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 Tax=Firmicutes RepID=D1BPK5_VEIPT Length = 895 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 116/352 (32%), Gaps = 41/352 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L+ + + + HA L G G ++ +R + C+ Sbjct: 9 KYRPQTFTDVVGQHQVSDTLMRAIREDKVAHAYLFAGPRGTGKTSMAKIFARAINCEHGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + +G D + + G+D VR + E + G KV + Sbjct: 69 TDHPCNECSACRSILSGQSMDVLEI---DAASNRGIDEVRALRESVKFMPVEGRKKVFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT A NALLKT+EEPPA F AT E E+L T+ SRC+ + Sbjct: 126 DEAHMLTTEAWNALLKTIEEPPAHVMFIFATTEIEKLPVTIVSRCQRYTFRRITSDDIAQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + A + G AL++ + + L V Sbjct: 186 RLSYVAEKEGFDLDSAAAQLIAVHADGGLRDALSILDQCAGMATGSITPQVVEELIGLVS 245 Query: 226 SGDWYSLLAALNHEQAP-----------------ARLHWLATLLMDAL--KRHHGAAQVT 266 L AL + P + L + L K A ++ Sbjct: 246 KEWIIHFLDALRNGDGPKVLSYVHDALAEGRDATQIMEALIQHVRALLVGKVAPDADELK 305 Query: 267 NVD-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLL 317 D AN + + L + I V N +I LL Sbjct: 306 VYDAFKDEFLAQANSVDFNELNQYVRSAQSIMNDAKQVD--NPRTIIEMGLL 355 >UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYU5_HALNC Length = 591 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 117/361 (32%), Gaps = 46/361 (12%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPKSFAEMVGQGHVLQALTNALDQSRLHHAYLFTGTRGVGKTTVARIFAKALNCEHGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + GVD R++ E + G K+ + Sbjct: 69 SSTPCGVCSACVEIDQGRFVDLIEV---DAASRTGVDDTRDLLENVAYAPVRGRFKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + + + ++ NALLKTLEEPP F LAT +P++L T+ SRC L P Sbjct: 126 DEVHMFSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLRALPLSQIQQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L + AL + GS AL+L + + Sbjct: 186 HLADVLQKENIAFEPAALHLIAEAANGSMRDALSLLDQAIAFTGGKLDTVQVSQILGLSD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELA------- 278 + ++ AL + A L+D + + +LA Sbjct: 246 HQIIWDMIDALYQQSADRLFA-----LVDEALDRAVEPAILLAQFIESIHQLAMGQWIQS 300 Query: 279 ------------NHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 + P LQ R + N + + LLR+ QPG Sbjct: 301 MSAAANPPPDELKSIDPQLLQLWYQIATTGRRDMAWSP--NARIGLEMTLLRML-AFQPG 357 Query: 327 V 327 Sbjct: 358 G 358 >UniRef50_B7VL96 DNA polymerase III subunit tau n=11 Tax=Vibrionales RepID=B7VL96_VIBSL Length = 752 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 76/358 (21%), Positives = 124/358 (34%), Gaps = 40/358 (11%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPTKFKEVVGQAHVLTALENALSQNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ RE+ + + G KV + Sbjct: 69 TSTPCGECATCKEIDEGRFVDLLEI---DAASRTKVEDTRELLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L P Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISVDNIHE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L VT AL + GS AL+L N + ++ Sbjct: 186 QLDHILEQENVTSEPRALGMIAHAADGSMRDALSLSDQAIALGNGNVVTDTVAHMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAAQV-TN 267 + LL A++ +Q + + L L + + Sbjct: 246 TDQAIHLLEAISSKQPQQAMACIQALAENGVEWDGLLSQLATQLHRLAMYQALPSTLDKA 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + ++ LSP +Q V R+ L + I ++LR+ +P Sbjct: 306 QPDAERLELMSKTLSPQDIQLYYQIVLKGRQDLPLSP--TARVGIEMVVLRML-AFRP 360 >UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31I98_THICR Length = 696 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 133/358 (37%), Gaps = 40/358 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + R HHA L G+G + S+ L C+Q Sbjct: 9 KWRPKNFSELVGQTHVMQALSNALDQQRLHHAYLFTGTRGVGKTTIARIFSKALNCEQGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C+ + G D + + V+ RE+ E + G KV + Sbjct: 69 TSKPCGVCSTCRSIDEGRFVDLIEV---DAASKTKVEDTRELLENVQYAPVQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F LAT +P +L T+ SRC L Sbjct: 126 DEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPHKLPITVLSRCLQFNLMRLTLPQIQQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +VT + AL + + GS +L++ + + QA+ V Sbjct: 186 HLAYILQQEQVTFEETALAMIAKSADGSARDSLSILDQAIAYGGGKVQYDAVQAMLGLVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVP-------------- 271 ++L+AL +E A + L + + Q+ Sbjct: 246 QQFTLNILSALANESADELKEVIQQLALMGVDYTALNGQLIEALHQMSMLQVLGDLTESS 305 Query: 272 ----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 ++ +L+ LSP R+Q + ++ + I + LLR+ +P Sbjct: 306 LIEVEMLQKLSEQLSPERIQVLYQIALLAKQDMALAPDI--RIGFEMSLLRML-AFKP 360 >UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridium RepID=B8I549_CLOCE Length = 562 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 123/356 (34%), Gaps = 42/356 (11%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + ++GR HA L G G + +R + C P+ Sbjct: 9 KWRPLVFEDVVEQEHVVRTIKNTVKSGRIAHAYLFCGTRGTGKTTMAKIFARAINCINPK 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + + D + + VD VRE+ +++ KV + Sbjct: 69 DGNPCNECEVCRGILDESILDVVEI---DAASNNSVDNVREIRDEVVYAPSQARYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F LAT +P +L AT+ SRC+ Sbjct: 126 DEVHMLSSGAFNALLKTLEEPPGHVVFILATTDPHKLPATILSRCQRFDFKKITPAGIAE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----------------DNWQAR 213 + + + D L RL+ G+ AL++ Sbjct: 186 RVKLIAQASGINIDDDGALLIARLADGALRDALSILDQCIAEGSTTITYQNVLDAIGIVS 245 Query: 214 ETLCQALAYSVPSGDWYSLLAAL-----NHEQAPARLHWLATLLMDALKRHHGAAQVTNV 268 + + ++ S + L+A++ L + L + Sbjct: 246 DDFISEIVDNIESKNVEGLVASVEMLSAEGRDILRFASDLVLYFRNLLICKLSKNPENIL 305 Query: 269 D----VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIE 320 D + + + RL I+ ++ QL +N+ + + +L+ I Sbjct: 306 DVGKQYLDKMIAQSEAFTKERLIGIIKELSSFETQLKYA--LNQRVFLEVMLISIS 359 >UniRef50_Q7MIV2 DNA polymerase III, subunits gamma and tau n=41 Tax=Vibrio RepID=Q7MIV2_VIBVY Length = 730 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 131/362 (36%), Gaps = 40/362 (11%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + + R HHA L G+G ++ ++ L C++ Sbjct: 9 KWRPRQFKEVVGQGHVLTALENALEHNRLHHAYLFSGTRGVGKTSIGRLFAKALNCEKGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ RE+ + + G KV + Sbjct: 69 TSAPCGQCDTCREIEEGRFVDLLEI---DAASRTKVEDTRELLDNVQYKPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L P Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPITVDAIHQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L VT AL + GS AL+L N Q L + ++ Sbjct: 186 QLDFILAKEGVTAQARALGMIAHAADGSMRDALSLTDQAIALGNGQIETDLVSHMLGTID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLM-----DALKRHHGAA-------------QVTN 267 + LL A++ +Q + + L D L + Sbjct: 246 TDQAIHLLEAISSKQPQVAMDKIQQLAQNGAEWDGLLQQLATQLHRIAMYQLLPSSLDKA 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + L+ LSP +Q R+ L N + + ++LR+ +P Sbjct: 306 QPDAEKIELLSRALSPQDVQLFYQIALKGRDDLSLAP--NGRIGMEMIVLRMM-AFRPAD 362 Query: 328 VL 329 V Sbjct: 363 VS 364 >UniRef50_P06710 DNA polymerase III subunit gamma n=112 Tax=Enterobacteriaceae RepID=DPO3X_ECOLI Length = 643 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 83/368 (22%), Positives = 135/368 (36%), Gaps = 41/368 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L GR HHA L G+G ++ L++ L C+ Sbjct: 9 KWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ R++ + + G KV + Sbjct: 69 TATPCGVCDNCREIEQGRFVDLIEI---DAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + AL R + GS AL+L + Q A+ ++ Sbjct: 186 QLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLD 245 Query: 226 SGDWYSLLAALNHEQA-----------------PARLHWLATLLMDALKRHHGAAQVTN- 267 SL+ A+ A L + LL A + N Sbjct: 246 DDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGND 305 Query: 268 -VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 + + ELA + P+ +Q + R++L +R + + LLR P Sbjct: 306 MAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAP--DRRMGVEMTLLR-ALAFHPR 362 Query: 327 VVLPVPHL 334 + LP P + Sbjct: 363 MPLPEPEV 370 >UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Tax=Bacilli RepID=Q4L3D4_STAHJ Length = 571 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 124/360 (34%), Gaps = 46/360 (12%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P + L + G+ HA + G G ++ ++ + C PQ Sbjct: 10 FRPQSFQDVVGQEHVTKTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVFAKAINCLNPQD 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + GT+ D + + GVD +R + +K+ KV + Sbjct: 70 GEPCNECAICKGITQGTNGDVIEI---DAASNNGVDEIRNIRDKVKYAPSESKYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPPA F LAT EP ++ T+ SR + + Sbjct: 127 EVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGTEQITDR 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVPS 226 L +++ +AL + S G AL++ E L + SV Sbjct: 187 LRFVAEEQQLDYDNEALEFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALDVTGSVDE 246 Query: 227 GDWYSLLAAL-----------------NHEQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 L + ++ ++ + + D + V N Sbjct: 247 AALNELFKDVIDGNVKNAFTRYHQFISEGKEVNRLINDMIYFVRDTIMNKT----VNNHA 302 Query: 270 VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVL 329 + + L ++ + + +N+ + LL++I ++ Sbjct: 303 EFDALM----NFDLDMLYHMIDIINDTLVSIR--FSVNQNVHFEVLLVKIAEMVKSQPDT 356 >UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 Tax=Clostridia RepID=C7HNJ4_9THEO Length = 394 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 73/362 (20%), Positives = 133/362 (36%), Gaps = 45/362 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + + HA L G G ++ ++ + C Sbjct: 8 KYRPKSFKEVVGQEHIVKTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFAKAVNCLNNT 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C CQ + T D + + V+ VRE+ E + KV + Sbjct: 68 DGEPCNSCEICQAINNNTTMDVLEI---DAASNNSVNDVRELRESVIYAPSQAKYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F LAT EP++L T+ SRC+ P + Sbjct: 125 DEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPDKLPDTILSRCQRFDFKRIPTRLIAQ 184 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQALAYSV 224 L R + + + L GS A++L + + E +C+ + Sbjct: 185 NLDRICNDSGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEGLITYEDVCE-MLGVA 243 Query: 225 PSGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHGAAQVTN 267 +SLL +N + A L L +L D + G ++ Sbjct: 244 NDEVLFSLLDYMNAKDVAASLKQLDKILSYGIDVGNFLKSLTYILRDMVLYKTGGEELKE 303 Query: 268 VDVPG--LVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + + E + + L L ++++++ I+ L+ +LR+ ++P Sbjct: 304 ILYSDVETIKERVQNFGTAFLTNALEKFTNLQKEVRY--AISPLTLLEVTILRL---IKP 358 Query: 326 GV 327 + Sbjct: 359 EI 360 >UniRef50_Q1QAW7 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QAW7_PSYCK Length = 685 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 83/359 (23%), Positives = 131/359 (36%), Gaps = 41/359 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + L+ + R HHA L G+G + LS+ L C Sbjct: 11 KYRPKNFHELIGQTHVSQALINAIDYNRLHHAYLFTGTRGVGKTTIARILSKCLNCDTGI 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + V+ RE+ + + G KV + Sbjct: 71 TSTPCGVCDNCVAIDQGRFIDLIEI---DAASRTKVEDTRELLDNVPYAPSQGRYKVYLI 127 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L P + Sbjct: 128 DEVHMLSTHSFNALLKTLEEPPEHVKFLLATTDPQKLPITIISRCLQFVLRPLSQSLLSE 187 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +V +Q AL + GS AL+L + ++ + Sbjct: 188 HLANVLTQEQVGYTQPALWQLASAAKGSVRDALSLTDQAIAFGQGALDDVTVNSMLGLID 247 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHH--GAAQVT 266 + D SL+ + + PA LA LL A Sbjct: 248 AADLVSLITDIYNHDKPAVAAHIEQMRAQMVDASSMFDGLAELLHQLALCQLLPEVALNV 307 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 N + +LA H+SP LQ V RE + + + + +LR+ +P Sbjct: 308 NEAQAQHIDQLAQHMSPDVLQLYYEIVVQAREGVKLASTPMQ--ALEMCILRLL-AFRP 363 >UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4U2_9GAMM Length = 635 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 89/356 (25%), Positives = 136/356 (38%), Gaps = 34/356 (9%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L+ + R HHA L G+G + LSR L C+Q Sbjct: 9 KYRPRTFDELVGQEHVSRALMHALDQDRLHHAYLFTGTRGVGKTTIARILSRCLNCEQGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C CQ + G D + + V+ RE+ + + G KV + Sbjct: 69 SARPCGVCPTCQEITDGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L P + Sbjct: 126 DEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKALPAEQIAG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + ALL+ + + GS AL+L + Q A+ +V Sbjct: 186 HLKTLLDKEMIRYEEPALLSLGKAAQGSMRDALSLTDQAIAFGSEQLSSEAVNAMLGTVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL---------LMDAL---KRHHGAAQVTNVDVPGL 273 +LL AL ++ L LAT+ L+D L Q Sbjct: 246 RNHVLTLLVALAEQEPGGVLQALATVSEHCPGELALLDELISQLHQLAVCQAVPGSYDET 305 Query: 274 VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVL 329 +LA L+ ++Q R L + + LLLR+ P VL Sbjct: 306 QQQLAAALTAEQIQLYYDVALRGRRDLQDAP--DSRAALEMLLLRMV-LFTPKGVL 358 >UniRef50_D0ZED4 DNA polymerase III, subunits gamma and tau n=2 Tax=Enterobacteriaceae RepID=D0ZED4_EDWTE Length = 689 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 82/367 (22%), Positives = 131/367 (35%), Gaps = 41/367 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L GR HHA L G+G ++ L++ L C+ Sbjct: 46 KWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI 105 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ R++ + + G KV + Sbjct: 106 TATPCGVCDNCREIEQGRFVDLLEI---DAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 162 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 163 DEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLRALDHEQIRA 222 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +T AL R + GS AL+L Q + ++ Sbjct: 223 QLEKIAHAEALTAEPRALQLLARAAEGSMRDALSLTDQAIAMGQGQITADAVSQMLGTLD 282 Query: 226 SGDWYSLLAALNHEQA-----------------PARLHWLATLLMDALKRHHGAAQV--T 266 +L+ AL L + LL + + Sbjct: 283 DEQPLALIEALTAADGTLVMARVEQAAGRGVDWENLLVEMLALLHRVAMLQLLPSALDSQ 342 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 V + ELA L P+ LQ + + R++L +R + + LLR P Sbjct: 343 FAAVEPRLRELARMLPPADLQLFYQILLNGRKEL--AFAPDRRMGVEMTLLR-ALAFHPK 399 Query: 327 VVLPVPH 333 V+ P Sbjct: 400 AVIAEPS 406 >UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=Desulfuromonadales RepID=Q3A7L0_PELCD Length = 582 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 80/367 (21%), Positives = 129/367 (35%), Gaps = 42/367 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L + + GR HHA L G+G + ++ L C+Q Sbjct: 9 KYRPQSFDDLVGQEHVSQTLGNAIKTGRVHHAFLFTGARGVGKTSAARIFAKALNCEQGL 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C+ C+ + AG D + + G + GVD +RE+ E + K+ + Sbjct: 69 SPQPCNVCQSCREISAGQGLDVFEI---DGASNTGVDDIRELRENIRYLPSRSRYKIFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F AT EP ++ T+ SRC+ P V Sbjct: 126 DEVHMLSTNAFNALLKTLEEPPEHAKFIFATTEPHKIPITILSRCQRFDFRKIPLPLIVA 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +++S+ +L R GS A + F E Q L V Sbjct: 186 RLKEIAAAEGISISERSLGLVARRGEGSMRDAQSTFDQVIAFCGDAVGEDDVQGLLGMVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTN- 267 L +L + LH L L + Sbjct: 246 RRLLVDTLESLLGHDSRRLLHCVCRVDELGHSFRQFCRELVETLRSLVVLKVVPEPEALL 305 Query: 268 ---VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 D + L+ + L+ + + +L + L + LLR+ H Sbjct: 306 DATPDELEELRRLSATVELEDLERAVTVLVRTEAELAGSSF--PRLALEMALLRLAHLPS 363 Query: 325 PGVVLPV 331 V + Sbjct: 364 GRDVATL 370 >UniRef50_A1SX03 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Psychromonas RepID=A1SX03_PSYIN Length = 774 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 79/363 (21%), Positives = 127/363 (34%), Gaps = 37/363 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L S R HHA L G+G + L++ L C++ Sbjct: 9 KWRPGNFQEVVGQQHVLTALSNSLAQNRLHHAYLFSGTRGVGKTTIARILAKSLNCEKGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C CQ + G D + + VD RE+ + + G KV + Sbjct: 69 TATPCGACVHCQAIDQGRFVDLLEI---DAASRTKVDDTREMLDNVQYKPAQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L Q T Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPITVLSRCLQFHLKAILPQEIET 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ + T AL + GS AL+L + + S+ Sbjct: 186 QLAYILNHEQATFEHAALTVIATAAEGSMRDALSLTDQALAFGSGHIAYQSVLKMLGSID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLM---DALKRHHGAAQV------------TNVDV 270 + + LL + + + D H A + NV Sbjct: 246 NNHLHYLLHFIASGNVSKVFLKIDEFVHLGADFAMLHQTLASLCHEIALSQMQPKQNVTQ 305 Query: 271 PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLP 330 V LA L+P +Q + N ++ ++R+ +P + Sbjct: 306 KSAVQLLAERLTPEEVQLYYQIAVQGYKD--YAFAPNGKIAFEMTVMRLL-AFKPANYIS 362 Query: 331 VPH 333 + Sbjct: 363 LDE 365 >UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD56_9FIRM Length = 628 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 69/354 (19%), Positives = 122/354 (34%), Gaps = 39/354 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 W P + L + ++GR HA L G G + L++ L C++ Sbjct: 9 TWRPQDFDGLVGQEHIRKALTNALESGRISHAYLFTGPRGTGKTSTARILAKALNCEKGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + GT D + + G+D +R++ E+++ KV + Sbjct: 69 TPHPCNTCDHCREITEGTSADVIEI---DAASNRGIDEIRKLREQVHFAPVSSRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + ++T A NALLKTLEEPP F LAT EP+++ T+ SRC+ Sbjct: 126 DEVHMITADAFNALLKTLEEPPEHVVFILATTEPQKIPTTIHSRCQRFDFRRVTVDDIAA 185 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNW---QARETLCQALAYSVPS 226 L + + DAL + G A+ L + + + Sbjct: 186 HLQKVAEGSNINAEPDALRLMAIQADGGMRDAVGLLDQCSIMANPVTAETVRQVLGIAGR 245 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMD-----------------ALKRHHGAA--QVTN 267 +L+ + PA L L L+ D L A ++ Sbjct: 246 DTMRALVEKIGRRDLPAALDLLNQLMDDGKDVTQVLTELLEYMRALLLYQADPAYQEIYL 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 D + + + SR+ A + + + +++ L + Sbjct: 306 TDTAENLKTVEPLFTRSRILAATARIHEASLDVKRS--LRSKIVAEICLYDLCR 357 >UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE33_ACHLI Length = 564 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 135/342 (39%), Gaps = 29/342 (8%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 + P D + L + + HA + G G ++ +++ L C + Sbjct: 9 TYRPKFFKDVFGQKVIVQTLQNALLNEKIGHAYIFSGPRGTGKTSVAKIVAKALNCLEAP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C + G PD + + GVD +R++ +K+ +G KV + Sbjct: 69 AKEPCGKCDVCLGVDRGDVPDIIEI---DAASNNGVDEIRDLRDKVKYAPSIGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT AA NALLKTLEEPP F LAT EP ++ AT+ SRC+ Sbjct: 126 DEVHMLTTAAFNALLKTLEEPPKYVVFILATTEPHKVPATILSRCQRFDFKNIEMDQIEE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + ++ +AL A R + G AL+L N + E ++ + Sbjct: 186 NLKQIINKENLKITPEALTAIARTAEGGMRDALSLLDQVVSFTNDEITEEDIYTVSGGLS 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAEL-------- 277 LL + +Q L L ++ D + + L+ ++ Sbjct: 246 RRYINELLKVIYLKQPQKALDLLNQIIKDGKDIARMVSDIILALRDVLLDKIRPDKKYPD 305 Query: 278 ANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + P+ + A L + ++++L T ++ + L+++ Sbjct: 306 LKDIKPNLIYAYLDILNDLQQELKFTT--SKRAYLELALIKM 345 >UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina baltica OS145 RepID=A3WNZ0_9GAMM Length = 640 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 76/351 (21%), Positives = 128/351 (36%), Gaps = 38/351 (10%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P E L + + R HHA L G+G + L++ L C++ Sbjct: 9 KWRPMQFDQVVGQQHVLEPLFHALEQQRLHHAYLFTGTRGVGKTTIARILAKALNCERGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ ++ G D + + V+ RE+ + + G KV + Sbjct: 69 SARPCGECPSCEEIEQGRFVDLIEV---DAASRTKVEDTRELLDNVQYRPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L + V Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVVSRCLQFNLRALDREQIVG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 L V AL + + GS AL+L + + Q + + Sbjct: 186 QLEYVLENENVPHDAQALTLLAQSAKGSMRDALSLTDQAIAQGQGKVQVESVQRMLGHLA 245 Query: 226 SGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHGAAQVTNV 268 + LL AL + + L+ L ++ A + Sbjct: 246 DAHVHPLLDALASGDSGSVFEKFDELKSLVPDPLMILNELQRVIHRIALIQQIPAMMGAE 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D L L LQ V +++ + ++ + + LLR+ Sbjct: 306 DKTNTTEALLRKLPAEVLQLYYRIVIEGKKE--APYAVDPQSAVEMTLLRL 354 >UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD9 Length = 600 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 80/357 (22%), Positives = 134/357 (37%), Gaps = 41/357 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 + P D L + + HA L G G + L++ + C Sbjct: 11 TYRPQTFKDVAGQEAIITTLKHAIDEKKIAHAYLFCGPRGTGKTTVAKLLAKAVNCTGNP 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C+ ++ GTHPD + + GV+ VR + +K+ G KV + Sbjct: 71 --KPCGECENCKQIENGTHPDVIEI---DAASNNGVEEVRSLIDKVKYAPTQGQYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +++ A NALLKTLEEPPA F LAT EP ++L T+ SRC+ +Q V Sbjct: 126 DEVHMMSPGAFNALLKTLEEPPAHVIFILATTEPHKILPTIISRCQRFDFTRLTDQEMVQ 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 + T +L RL+ G AL++ + + L + V Sbjct: 186 RMQYVLKEEGKTYDDGSLELIARLANGGMRDALSILEQCLAYNDDHLSINDIHTIYGIVS 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-------------LMDALK-----RHHGAAQVTN 267 D +LL L + L L + L+D LK R+ A + + Sbjct: 246 MDDKTNLLKVLLSKNMSESLKILDKMDKSGIDIKRLTFDLIDILKDIVVYRNTKDASIMS 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 V + + +++ + + + E + + + LLR+ + Sbjct: 306 VMTQKDLENIVPYITSDECFSFIDILMDASE--KYIRATDPHIYFELALLRLCNQEH 360 >UniRef50_C6ITP2 DNA polymerase III subunit gamma/tau n=10 Tax=Bacteroidales RepID=C6ITP2_9BACE Length = 619 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 120/362 (33%), Gaps = 42/362 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + HA L G+G ++ + C P Sbjct: 10 KYRPSTFESVVGQRALTTTLKNAIATQKLAHAYLFCGPRGVGKTTCARIFAKTINCMTPT 69 Query: 55 G-HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 ++C C C + + L + VD +R++ E++ ++G KV Sbjct: 70 TDGEACNECESCVAFNEQRSYNIHEL---DAASNNSVDDIRQLVEQVRIPPQIGKYKVYI 126 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ +A NA LKTLEEPP F LAT E ++L T+ SRC+++ + V Sbjct: 127 IDEVHMLSASAFNAFLKTLEEPPRHAIFILATTEKHKILPTILSRCQIYDFNRISVEDTV 186 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQAL--- 220 L +T +AL + G AL++F +++ + L Sbjct: 187 NHLSYVAAKENITAEPEALNVIAMKADGGMRDALSIFDQVVSFTGGNITYKSVIENLNVL 246 Query: 221 ------------AYSVPSGDWYSLLAALNHE-QAPARLHWLATLLMDALKRHHGAA---Q 264 + S LN + L++ D L A Sbjct: 247 DYEYYFRLTDCFLENRVSDALLLFNDVLNKGFDGSHFITGLSSHCRDLLVSKDAATLPLL 306 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 + E A L + L N+ LL+ L+++ Sbjct: 307 EVGASIRQRYQEQAQKCPLQFLYRAMKLCNDC--DLNYRASKNKRLLVELTLIQVAQLTT 364 Query: 325 PG 326 G Sbjct: 365 EG 366 >UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5D8_LARHH Length = 769 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 84/360 (23%), Positives = 130/360 (36%), Gaps = 40/360 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L+ G+G + L++ L C++ Sbjct: 9 KWRPRRFADLVGQEHVVRALSNALAGQRLHHAYLLTGTRGVGKTTIARILAKSLNCERGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G + CG C C+ + AG D + + G+D +REV E G KV + Sbjct: 69 GAEPCGECAACRQIDAGRFVDLLEI---DAASNTGIDNIREVIENAQYAPTAGRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPPA F LAT +P+++ T+ SRC L Q Sbjct: 126 DEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFALRNMTPQQVSG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ + AL R ++GS AL+L RE +A+ +V Sbjct: 186 HLAHVLATEGIEFESPALALLARAASGSMRDALSLLDQAIAYGEGVVREDGVRAMLGAVD 245 Query: 226 SGDWY---------------SLLAALNHEQA--PARLHWLATLLMDALKRHHGAAQVTNV 268 + L A L LA L + + Sbjct: 246 RRYLFTLLAALADGDGAAVLDEARELAARGIGFDAALEELAQLFYQIALMQAVPQAIADD 305 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + +A LA ++P +Q L + +L LLR+ P Sbjct: 306 EPEREALAALAGSMAPEDVQLYYQMAVQGGRDLPLAP--DEQLGFNMALLRML-AFHPQT 362 >UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q117S8_TRIEI Length = 695 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 77/356 (21%), Positives = 129/356 (36%), Gaps = 43/356 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ--Q 52 ++ P D + L + R A L G G + L++ L C Sbjct: 9 KYRPQTFADLVGQDVIAQTLTNAIHTKRIAPAYLFTGPRGTGKTSSARVLAKSLNCLSYD 68 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C + G+ D + + GVD +RE+ E+ KV Sbjct: 69 HPTPSPCGTCNVCVGITKGSTLDVIEI---DAASNTGVDNIRELIERSQFAPVQCRYKVY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ +A NALLKTLEEPP F LAT +P+R+LAT+ SRC+ P + Sbjct: 126 VIDEVHMLSVSAFNALLKTLEEPPKGVVFILATTDPQRVLATIISRCQRFDFRRIPLEAM 185 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ---ALAYSV 224 V L ++ ++ +A+ +++ G A +L + A E + L +V Sbjct: 186 VKHLHHIAIEEKIDITTEAIQMIAQIAQGGLRDAESLLDQLSLLAGEITVERVWDLVGAV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTN 267 P D L+ A+ + + L LA D L Sbjct: 246 PERDLMVLVEAIAADNSIKVLKCTRQIMDRGKEPIIVLQNLAGFYRDLLIAKTAPTSKNL 305 Query: 268 VDVP----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 V + + + + + A + Q+ + T L + LL + Sbjct: 306 VALTKPTWEKLCQFSQDWDIGTILAGQKHLQTSEVQIKNTTQ--PRLWLEVTLLGL 359 >UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEE5_METSD Length = 610 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 84/366 (22%), Positives = 132/366 (36%), Gaps = 39/366 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + + R HHA L G+G L L++ L C+ Sbjct: 9 KWRPKLFEALVGQEHVVRALTNALEQQRLHHAYLFTGTRGVGKTTLARILAKSLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + VD++RE+ + +G KV + Sbjct: 69 TAHPCGVCSACVDIDRGRFVDMLEV---DAASNTQVDSMRELLDNAQYAPTVGRFKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPPA F LAT +P+++ T+ SRC L + Sbjct: 126 DEVHMLSRSAFNAMLKTLEEPPAHVKFILATTDPQKMPVTVLSRCLQFNLRQMSTPAITS 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + AL R + GS AL+L + E+ +A+ ++ Sbjct: 186 HLQEVLAKENIPSDSIALQLISRAANGSMRDALSLLDQAIAYGGNRVNESEVRAMLGAID 245 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQV-TN 267 Y LL AL + P+ L LA LL + + Sbjct: 246 QSYLYGLLDALIAQDGPSLMAQAKSMEERSLSFDTALADLAQLLHHLAVAQTVPESIPLD 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + + +LA L ++Q R L + T LLR+ + Sbjct: 306 LPERTALLDLATKLPADKVQLYYQIALLGRRDLGLAP--DEFAGFTMCLLRMLAFSNEST 363 Query: 328 VLPVPH 333 P P Sbjct: 364 SKPAPT 369 >UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTB0_9GAMM Length = 647 Score = 364 bits (935), Expect = 2e-99, Method: Composition-based stats. Identities = 80/360 (22%), Positives = 127/360 (35%), Gaps = 40/360 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + L+ + R HHA L G+G + LS+ L C+ Sbjct: 9 KWRPRIFAEMAGQQHVLQALINALDHDRLHHAYLFTGTRGVGKTTIARILSKCLNCEVGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G D + + GVD +RE+ + + G K+ + Sbjct: 69 SSVPCGECSSCTEIGEGRFIDLIEV---DAASRTGVDDMRELLDNVQYAPSRGRYKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ ALLKTLEEPP F AT +P++L T+ SRC L + Sbjct: 126 DEVHMLSKSSFAALLKTLEEPPPHVKFLFATTDPQKLPITVLSRCLQFNLKNLSAERITE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +V + AL + R + GS AL+L Q E A+ ++ Sbjct: 186 HLQFVLGEEQVPFEEAALWSLARAADGSMRDALSLTDQAIGHGGGQVNEGEVSAMLGTIE 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDALKRHHGAAQVTNVDVP---- 271 + AL L + + L D L H A V V Sbjct: 246 RSYVVDICQALISGSGTELLAAIGRMAEQAPDYDAALTDILSVWHQVAIVQTVPEALDKG 305 Query: 272 ----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + LA +S Q R+ L + + ++LR +P Sbjct: 306 VANYTELLALAAAVSREDTQLFYQICLLGRKDLQLSP--DAKSGFEMVMLR-ALAFRPQT 362 >UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2P9_DESAS Length = 527 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 78/351 (22%), Positives = 131/351 (37%), Gaps = 45/351 (12%) Query: 3 WYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P L + L + + R HA L G G + L++ L C Q +G Sbjct: 10 YRPQLFAEIMGQRHIVDTLENALKNNRIAHAYLFCGPRGTGKTSTAKILAKALNCHQIKG 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C + G+ D + + G+D +R++ E++ G KV V Sbjct: 70 VEPCNKCSSCVSVAQGSAIDVIEI---DAASNRGIDEIRDLKERVKFAPTGGKYKVYIVD 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP F LAT EP +L T+ SRC+ + + Sbjct: 127 EVHMLTIEAFNALLKTLEEPPEHVIFVLATTEPHKLPLTILSRCQRFDFKSIGAEPMTSR 186 Query: 176 LSR-----EVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQALAYSVP 225 L +V +S AL ++ + G AL++ + + E L +V Sbjct: 187 LKDILQDLQVKISPAALELIVQAAEGGLRDALSILDQIITFNNTAEISEEDIHNLLGTVN 246 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLL-----------------MDALKRHHGAAQVTNV 268 SLL L A + L +A + D L + + N Sbjct: 247 ERVINSLLEYLLRGDAGSSLQVIAEIFLEGKDLKMFVKGFASCVRDLLLQSIEPTAIKNF 306 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + S L A+L + + ++ + +++ L++ Sbjct: 307 SRTDQI------YSVEYLLALLDCLTELEPKMKFSSQ--PRVILELALIKF 349 >UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUJ6_9CLOT Length = 564 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 71/354 (20%), Positives = 124/354 (35%), Gaps = 41/354 (11%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + D L +AGR HA L G G L++ + C + Sbjct: 11 KWRPQVFSDVVGQPQVTVTLQNELKAGRIAHAYLFTGSRGTGKTTCAKILAKAVNCLSLK 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G+ D + + GV+ +R + E+ + +V + Sbjct: 71 EGDPCGECESCVGIDNGSVMDVVEI---DAASNNGVENIRNLREEASFTPAAAKYRVYII 127 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPPA F LAT E +L AT+ SRC+ + Sbjct: 128 DEVHMLSIGAFNALLKTLEEPPAHVVFILATTEVHKLPATILSRCQRFDFHRIDPEVIAD 187 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNW---QARETLCQALAYSVPS 226 L + ++A L R++ G AL+L + + A Sbjct: 188 RLQFVAGEENAHLEREAALLIARIADGGMRDALSLLDQCMGRSSEITLEVVSETAGLAGR 247 Query: 227 GDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHH----GAAQV 265 +SL + + L + L + + V Sbjct: 248 DHLFSLADTVLRQNGGQALEQIDELHKASKDMVRLCEELAGHFRNLMLLKTMKNPQNLIV 307 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + D + A + + + + +E++ G +R + + LL++ Sbjct: 308 VSQDEYQKLQVQAEAFTLAGTIHAIDVLQAAKERM--FRGFDRRVELEMALLKL 359 >UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLY2_ACIFE Length = 671 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 124/354 (35%), Gaps = 39/354 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 W P P + L + + GR HA L G G + L++ L C++ Sbjct: 9 TWRPQDFDDLVGQAPIKKALTNALETGRISHAYLFAGPRGTGKTSTARILAKALNCEKGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + GT D + + G+D +R++ E++ KV + Sbjct: 69 TAHPCNQCSNCREITEGTCGDVVEI---DAASNRGIDEIRKLREQVYFAPTSCRYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + ++T A NALLKTLEEPP F LAT EP+++L T+ SRC+ Sbjct: 126 DEVHMITTDAFNALLKTLEEPPEHVVFILATTEPQKILNTILSRCQRFDFRRATVDEIAE 185 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDN---WQARETLCQALAYSVPS 226 L + + +AL + G AL+L + + + V Sbjct: 186 HLEKVAKGSHIQAEPEALRLMAIQADGGLRDALSLLDQCSVMASPVTAETVRQVLGLVGR 245 Query: 227 GDWYSLLAALNHEQA-----------------PARLHWLATLLMDALKRHHG--AAQVTN 267 L+ + + L L L ++ Sbjct: 246 EKLRELVTRIGQKNLSGALDALGQLLEQGKEMEQILAELLEYFRALLLYQADREYQEIYL 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 D +AE A+ + S++ A + + + S + ++++ L + Sbjct: 306 TDTREALAETASLFTSSQIVASVERIHEAIRE--SKYSLRKKIVGELCLFDLCE 357 >UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N205_9FIRM Length = 640 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 75/364 (20%), Positives = 127/364 (34%), Gaps = 44/364 (12%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC--QQP 53 + P L + + R HA L G G + L++ L C + P Sbjct: 10 YRPQTFGEVAGQEHIVTTLKNAIKENRISHAYLFAGPRGTGKTTVAKLLAKALNCTGENP 69 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 C C C+ + G HPD + + GVD VR++ +K+ G KV Sbjct: 70 ----PCDQCPNCKAITVGEHPDVIEI---DAASNNGVDEVRDLIDKVKYAPINGKYKVYI 122 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +++ A NALLKTLEEPPA F LAT EP ++L T+ SRC+ + Sbjct: 123 IDEVHMMSTGAFNALLKTLEEPPAHIVFVLATTEPHKILPTIISRCQRFDFKKVENHDII 182 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD---NWQARETLCQALAYSVP 225 + L AL + +L+ G AL++ + N + + + Sbjct: 183 SRLEYVLKSENKKYELSALESVAKLAEGGMRDALSILEQCLAYNNELTVESVNMVYGLLS 242 Query: 226 SGDWYSLLAALNHEQAPARLH-----------------WLATLLMDALKRHHGAA-QVTN 267 + S + L + L L +L D + + + Sbjct: 243 MDNKISFIKQLLSKDIKGVLTSLDNMLSGSIDIKRLTFDLVDVLKDIIIYKNTQDVSILF 302 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 V V LA ++ I+ + N +L+I + ++ Sbjct: 303 VLTQQDVDNLAPYILVEEAFEIIDILIEASSHYSQSLDANT--YFELAMLKICNRIKEEN 360 Query: 328 VLPV 331 L + Sbjct: 361 KLAI 364 >UniRef50_C3QNI8 DNA polymerase III subunit gamma/tau n=13 Tax=Bacteroidales RepID=C3QNI8_9BACE Length = 621 Score = 364 bits (934), Expect = 3e-99, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 118/362 (32%), Gaps = 42/362 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + HA L G+G ++ + C P Sbjct: 10 KYRPSTFESVVGQRALTTTLKNAIATQKLAHAYLFCGPRGVGKTTCARIFAKTINCMTPT 69 Query: 55 -GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 ++C C C + + L + VD +R++ E++ ++G KV Sbjct: 70 ADGEACNQCESCVAFNEQRSYNIHEL---DAASNNSVDDIRQLVEQVRIPPQIGKYKVYI 126 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ +A NA LKTLEEPP F LAT E ++L T+ SRC+++ + V Sbjct: 127 IDEVHMLSASAFNAFLKTLEEPPRHAIFILATTEKHKILPTILSRCQIYDFNRISVEDTV 186 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG--------------------D 208 L +T +AL + G AL++F Sbjct: 187 NHLSYVASKEGITAEPEALNVIAMKADGGMRDALSIFDQVVSFTGGNITYKSVIDNLNVL 246 Query: 209 NWQARETLCQALAYSVPSGDWYSLLAALNHE-QAPARLHWLATLLMDALKRHHGAA---Q 264 +++ L + S LN + L++ D L Sbjct: 247 DYEYYFRLTDCFLENKVSDALLLFNDILNKGFDGSHFITGLSSHFRDLLVGKDPVTLPLL 306 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 + E A L + L N+ LL+ L+++ Sbjct: 307 EVGASIRQRYQEQAQKCPLPFLYRAMKLCNEC--DLNYRISKNKRLLVELTLIQVAQLTT 364 Query: 325 PG 326 G Sbjct: 365 EG 366 >UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 Tax=Thermoanaerobacter RepID=B0K0Z9_THEPX Length = 518 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 73/362 (20%), Positives = 133/362 (36%), Gaps = 45/362 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + + HA L G G ++ ++ + C Sbjct: 8 KYRPKSFKEVVGQEHIVKTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFAKAVNCLNNT 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C CQ + T D + + V+ VRE+ E + KV + Sbjct: 68 DGEPCNSCEICQAINNNTTMDVLEI---DAASNNSVNDVRELRESVIYAPSQAKYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F LAT EP++L T+ SRC+ P + Sbjct: 125 DEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPDKLPDTILSRCQRFDFKRIPTRLIAQ 184 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQALAYSV 224 L R + + + L GS A++L + + E +C+ + Sbjct: 185 NLDRICNDSGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEGLITYEDVCE-MLGVA 243 Query: 225 PSGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHGAAQVTN 267 +SLL +N + A L L +L D + G ++ Sbjct: 244 NDEVLFSLLDYMNAKDVAASLKQLDKILSYGIDVGNFLKSLTYILRDMVLYKTGGEELKE 303 Query: 268 VDVPG--LVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + + E + + L L ++++++ I+ L+ +LR+ ++P Sbjct: 304 ILYSDVETIKERVQNFGTAFLTNALEKFTNLQKEVRYA--ISPLTLLEVTILRL---IKP 358 Query: 326 GV 327 + Sbjct: 359 EI 360 >UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus RepID=A8W2Q1_9BACI Length = 600 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 72/361 (19%), Positives = 125/361 (34%), Gaps = 41/361 (11%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P L + + HA L G G + +++ + C+Q Sbjct: 10 WRPQVLKDVVGQEHITRTLRNALLQQKLSHAYLFSGPRGTGKTSAAKIIAKAVNCEQAPV 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C +Q G+ D + + GVD +R++ +K+ KV + Sbjct: 70 EEPCNTCSTCTGIQDGSIVDVIEI---DAASNNGVDEIRDIRDKVKFAPSGASYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP F LAT EP ++ T+ SRC+ + Sbjct: 127 EVHMLTTGAFNALLKTLEEPPRHVIFILATTEPHKIPLTIISRCQRFDFKRITAHTMIKR 186 Query: 176 LSREVT-----MSQDALLAALRLSAGSPGAALALFQGDNW----QARETLCQALAYSVPS 226 + + + DAL R S G AL+L ++ + Sbjct: 187 MEEIIEDGDLAVDPDALSMIARASEGGMRDALSLLDQAISYADTSVTLDDVLSIIGAASQ 246 Query: 227 GDWYSLLAAL-----------------NHEQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 Y ++ AL + + + L D L A + D Sbjct: 247 DLMYDVMEALLDQQVADGLTAIDRLMSDGKDPGRFMEDFIFLTRDLLMVQAAPALDESGD 306 Query: 270 VP---GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 LA+ S S L A++ + H ++Q+ + + + + +++ Sbjct: 307 RKLGDQRFEILASKASQSWLFALMEKLNHFQQQMKWAS--HPAVFLEMFVVQACQMPSRE 364 Query: 327 V 327 Sbjct: 365 P 365 >UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LV54_9FIRM Length = 691 Score = 363 bits (932), Expect = 5e-99, Method: Composition-based stats. Identities = 78/356 (21%), Positives = 128/356 (35%), Gaps = 41/356 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + AGR HA L G G + L++ L C++ Sbjct: 36 QWRPGSFKDLVGQTAVSRTLSHAISAGRIAHAYLFSGPRGTGKTSTAKILAKSLNCEKGP 95 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C + GT D + + + G+D +R++ EK+ G KV + Sbjct: 96 TPEPCGVCKNCTKIADGTALDVFEI---DAASNRGIDEMRDLREKVKFTPAEGRYKVYII 152 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPPA F LAT EP ++ AT++SRC+ + Sbjct: 153 DEVHMLTTEAFNALLKTLEEPPAHVVFILATTEPHKVPATIQSRCQRFDFRRITVEEIEA 212 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ ++AL R + G AL+L D + + Sbjct: 213 RLAYVAQEMKIPCEKEALRLIARQADGGMRDALSLLDQCASLDGDTLTAACVEENLGLIG 272 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV 268 Y L A+ + L L L + A Sbjct: 273 HEPIYRLTKAIGERAKGEVLETIAELLALGKDPMQLLAELTIHLRSLMIYEAAGALAALN 332 Query: 269 ---DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 D + E + +++ A++ + +L + + LL + Sbjct: 333 LADDTGAALEEQKALFTQAQIMAMIARLHEAMAELRWTPQ--PRITLEVALLSLCR 386 >UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobacteria RepID=Q31PS7_SYNE7 Length = 652 Score = 363 bits (932), Expect = 6e-99, Method: Composition-based stats. Identities = 82/371 (22%), Positives = 125/371 (33%), Gaps = 43/371 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P D L + R A L G G + L++ L CQQ Sbjct: 9 KYRPQCFADLVGQEAIARTLSQALAQQRIAPAYLFTGPRGTGKTSSARILAKSLNCQQST 68 Query: 54 -QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + G D + + GVD +RE+ E+ KV Sbjct: 69 VPTASPCGECEACRAIARGNALDVIEI---DAASNTGVDNIRELIERAQFAPVQCRFKVY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ AA NALLKTLEEPP F LAT +P+R+L T+ SRC+ P Q Sbjct: 126 VIDECHMLSTAAFNALLKTLEEPPDRVVFVLATTDPQRVLPTIISRCQRFDFRRIPLQAM 185 Query: 173 VTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNW---QARETLCQALAYSV 224 L + + A+ +L+ G A +L L +V Sbjct: 186 TDHLQVIAQKESIEIEPTAIALVAQLAQGGLRDAESLLDQLGLLPPPVTPEAVWDLLGAV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLL-----------------MDALKRHHGAAQV-- 265 P LL A+ A L + LL D L + Sbjct: 246 PERQLLQLLEAIAANDPEALLTLIRQLLDRGREPLTVLQNLTAFSRDLLIARTAPQRRDL 305 Query: 266 --TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 + A +P ++ + + Q+ + T L + LL + Sbjct: 306 TTVTEATWQELCTFAEDWTPEQILQLQQHLRQSELQIKNTTQ--PRLWLEVALLGLLPSA 363 Query: 324 QPGVVLPVPHL 334 Q V P + Sbjct: 364 QAPVTTAPPAI 374 >UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=cellular organisms RepID=Q7NXL6_CHRVO Length = 639 Score = 362 bits (931), Expect = 7e-99, Method: Composition-based stats. Identities = 81/352 (23%), Positives = 135/352 (38%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + + R HHA L+ G+G + L++ L C+ Sbjct: 9 KWRPKRFADLVGQEHVVRALSNALKEQRLHHAYLLTGTRGVGKTTIARILAKSLNCETGT 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C+ + +G D + + G+D +REV E +G KV + Sbjct: 69 TAEPCGECQACRQIDSGRFVDLLEI---DAASNTGIDNIREVLENAQYAPTMGRFKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPP F LAT +P+++ T+ SRC L Q + Sbjct: 126 DEVHMLSKSAFNAMLKTLEEPPGHVKFILATTDPQKVPVTVLSRCLQFSLRNMTPQQVSS 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ + AL R ++GS A +L + +E +A+ +V Sbjct: 186 HLAHMLDIEGIHYEAPALALLGRAASGSMRDAQSLLDQAIAYGLGEVKEDGVRAMLGAVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHG------------------AAQVTN 267 ++LL AL PA + L + AA + Sbjct: 246 RRYLFTLLQALAASDGPALMAEADRLAERGVSFDSALSELAVLLQQLALAQTVPAALAAD 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + LA+ ++P +Q H R+ L + LLR+ Sbjct: 306 EPERDTLFALADAIAPQDVQLYYQIAIHGRKDLALAPDEHA--GFNMTLLRM 355 >UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8U6_TOLAT Length = 760 Score = 362 bits (931), Expect = 9e-99, Method: Composition-based stats. Identities = 79/352 (22%), Positives = 131/352 (37%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + L + GR HHA L G+G + L++ L C+ Sbjct: 9 KWRPRNFHEVMGQQHVLQALSNALDQGRLHHAYLFSGTRGVGKTTIARILAKCLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + G D + + V+ R++ + + G K+ + Sbjct: 69 TSRPCGQCSACREIDQGNFVDLLEI---DAASRTKVEDTRDLLDNVQYKPARGRFKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + V Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALTREQIVE 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++T AL + + GS AL+L N + Q + ++ Sbjct: 186 QLQRVLQAEQLTYEPAALSLLAKAAQGSMRDALSLSDQAIAYGNGLLQAETVQQMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPARLH-----------------WLATLLMDALKRH-HGAAQVTN 267 Y +L+ L A + LA+LL G Sbjct: 246 HRQLYQILSLLAARDGAALMQQIGSLAELAPDYDQLHVELASLLHRTAMWQLLGQQTEPG 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D + LA + P LQ + R++L + + LLR+ Sbjct: 306 ADDTEELQLLAEQIPPEELQLYYQITLNGRKELPLAP--DGRSALEMTLLRM 355 >UniRef50_C5AFH6 DNA polymerase III, subunits gamma and tau n=1 Tax=Burkholderia glumae BGR1 RepID=C5AFH6_BURGB Length = 861 Score = 362 bits (930), Expect = 9e-99, Method: Composition-based stats. Identities = 86/352 (24%), Positives = 124/352 (35%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L G+G L ++ L C+ Sbjct: 9 KWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAKALNCETGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG CR C+ + G DY + + GVD + + E+ KV + Sbjct: 69 TSQPCGVCRACREIDEGRFVDYVEM---DAASNRGVDEMAALLERAVYAPVDARFKVYMI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NA+LKTLEEPP F LAT +P+++ T+ SRC L P + V Sbjct: 126 DEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPAGHIVM 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNW----QARETLCQALAYSVP 225 L V AL R + GS AL+L + E + ++ Sbjct: 186 HLERILGEERVAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTEAAVSGMLGALD 245 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNV 268 LL A+ P L LA LL A V + Sbjct: 246 QTYMVRLLDAIASSDGPEILAIADEMALRSLSFSTALQDLAGLLHRIAWAQFAPASVLDE 305 Query: 269 -DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + A LSP ++Q R +L T LLR+ Sbjct: 306 WPEAADLRRFAEALSPEQVQLYYQIATVGRGELGLAPDEYA--GFTMTLLRM 355 >UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clostridium RepID=C9XIC8_CLODC Length = 545 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 125/356 (35%), Gaps = 42/356 (11%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P + L + HA L G G + SR + C Sbjct: 9 YRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFSRAVNCLNKIN 68 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + D + + VD +RE+ E + KV + Sbjct: 69 EEPCNECEICESVLKDNTMDVVEI---DAASNNSVDDIRELRESVKYSPANAKYKVYIID 125 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPP+ F LAT EP ++ AT+ SRC+ + + Sbjct: 126 EVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRYDFKRVTVKDMTLR 185 Query: 176 LS-----REVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQALA---- 221 + + + AL R S G+ AL++ ++ + + + + Sbjct: 186 MKKICEDEGIDIDDKALNLIARNSQGALRDALSILDQCMSFGESKIDYKDVVELMGSVNI 245 Query: 222 -------YSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRH--HGAAQVTN 267 + D L LN + ++ L + + ++ + Sbjct: 246 EQLFELSQCIVEQDTKKSLEILNEFVLWGKDIRNLINDLIDHFRNLMVCKVSSELDEIIS 305 Query: 268 --VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 + + + ++ + L IL + ++ + S + N +L+ +++I Sbjct: 306 LPEETIEQLKIQSKNIDINDLIRILNILSITQDDIKSSS--NPRVLVEITIMKIAQ 359 >UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V121_9FIRM Length = 615 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 123/357 (34%), Gaps = 41/357 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 RW P D L + +G+ HA L G G + L+R L C + Sbjct: 9 RWRPERFADLVGQEHISRTLSRAVTSGQISHAYLFTGPRGTGKTSTAKILARALNCAEGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CGHC C+ + G+ D + + + G+D +R++ E + G K+ + Sbjct: 69 TLTPCGHCDSCRSISDGSSMDVFEI---DAASNRGIDEIRDLRESVKFAPTEGLYKIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F LAT EP ++ AT++SRC+ + Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPERVIFILATTEPHKVPATIQSRCQRYDFHRITVTEICD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + +DAL + G AL++ Q V Sbjct: 186 RLIYVCKESGIEAEEDALGIIAVQADGGMRDALSILDQCTALAEGTLTAERVQEALGLVG 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDV--------------- 270 + + A A + L+ LL + + ++ Sbjct: 246 RAWIRQMAEQIAARDAAALITQLSQLLQNGRELRQVLVELAQYFRSLMIAGVGGTISAAE 305 Query: 271 -----PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 + A S + IL + + L + + LL+ + H Sbjct: 306 LCAGDAEQLRADAAQFSEDEIMTILRRLNETMQDLRTSPQ--PRIAAETLLIELCHA 360 >UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Bacillales RepID=DPO3X_BACSU Length = 563 Score = 362 bits (929), Expect = 1e-98, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 124/368 (33%), Gaps = 42/368 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P D + L + + HA L G G + ++ + C+ Sbjct: 10 FRPQRFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAKAVNCEHAPV 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G+ D + + GVD +R++ +K+ KV + Sbjct: 70 DEPCNECAACKGITNGSISDVIEI---DAASNNGVDEIRDIRDKVKFAPSAVTYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPP F LAT EP ++ T+ SRC+ Q V Sbjct: 127 EVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITSQAIVGR 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----------------NWQARE 214 + + ++ + + +L + G AL+L + Sbjct: 187 MNKIVDAEQLQVEEGSLEIIASAADGGMRDALSLLDQAISFSGDILKVEDALLITGAVSQ 246 Query: 215 TLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 LA S+ + L LN + + + D L ++ Sbjct: 247 LYIGKLAKSLHDKNVSDALETLNELLQQGKDPAKLIEDMIFYFRDMLLYKTAPGLEGVLE 306 Query: 270 V---PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 EL+ + L ++ + +++ + + +++I Sbjct: 307 KVKVDETFRELSEQIPAQALYEMIDILNKSHQEMKWTN--HPRIFFEVAVVKICQTSHQS 364 Query: 327 VVLPVPHL 334 +P + Sbjct: 365 A-ADLPEV 371 >UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 Tax=Exiguobacterium RepID=B1YGC8_EXIS2 Length = 561 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 128/361 (35%), Gaps = 41/361 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P + + + R HA L G G +L +++ + C+Q Sbjct: 10 YRPQRFDEVVGQAHITRTIQNALMEERMSHAYLFSGPRGTGKTSLAKIIAKAINCEQAPV 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 ++ C C C+ + G+ PD + + + GVD +RE+ +K+ KV + Sbjct: 70 NEPCNECPTCRAITEGSSPDVFEI---DAASNNGVDEIREIRDKVKYPPSEAAYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPPA F LAT EP ++ AT+ SRC+ + + Sbjct: 127 EVHMLSTGAFNALLKTLEEPPAHAIFILATTEPHKIPATIISRCQRFDVKRHEVDQLMER 186 Query: 176 LS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVPS 226 + + + ++ AL R + G AL+L N + + +V Sbjct: 187 MQYILSDQTIGYTETALRLIARAADGGMRDALSLLDQAVAFSNGDLTDDAVLEVTGAVED 246 Query: 227 GDWYSLLAALNHEQAPARL-----------------HWLATLLMDALKRHHGAAQVTNVD 269 ++ AL Q L L D L V ++ Sbjct: 247 EALLAVANALQAHQVDQLLQTLEKMQRAGKDLKRFVEDLVFFYRDTLLLKTSPTAVDLLE 306 Query: 270 VP---GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 + I+ + ++Q+ + +L+ ++I + Sbjct: 307 RARPTEAFKTFVETIETEACFHIIEQLHDCQQQMRLTN--HPRVLVEIAFIQIAEQGRTT 364 Query: 327 V 327 Sbjct: 365 G 365 >UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79 Tax=Bacillaceae RepID=Q65PK1_BACLD Length = 566 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 125/365 (34%), Gaps = 41/365 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P L D + L + + HA L G G + ++ + C++ Sbjct: 10 FRPQLFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKLFAKAVNCERAPV 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G+ D + + GVD +R++ +K+ KV + Sbjct: 70 SEPCNECSACKGITNGSISDVIEI---DAASNNGVDEIRDIRDKVKFAPSAVTYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPP F LAT EP ++ T+ SRC+ Q V Sbjct: 127 EVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITSQAIVGR 186 Query: 176 LS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL-------------- 216 + ++ + AL + G AL+L + E L Sbjct: 187 MKKIVEAEQLKVQDGALDIIASAADGGMRDALSLLDQAVSFSGEELTVDDALLITGAVSQ 246 Query: 217 --CQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 LA ++ + L LN + + + D L ++ Sbjct: 247 HYIGKLASTLHEKNVSGALETLNELLQQGKDPAKLIEDMIFYFRDMLLYQTAPDLEGVLE 306 Query: 270 V---PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 L+ + S L ++ + +++ + + ++++ + G Sbjct: 307 KVKVDEEFQTLSRQIPASDLYEMIDILNKSHQEMKWTN--HPRIFFEVAVVKLCQGPKAG 364 Query: 327 VVLPV 331 Sbjct: 365 ASAAA 369 >UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 Tax=Thermoanaerobacterales RepID=C6PF43_CLOTS Length = 533 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 65/368 (17%), Positives = 135/368 (36%), Gaps = 44/368 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + GR HA L G G ++ ++ + C Sbjct: 8 KYRPRNFSEVLGQNHIVRTLKNQIKTGRIGHAYLFCGTRGTGKTSVAKIFAKAVNCPNSV 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C+ C+ + D + + VD VRE+ + + + KV + Sbjct: 68 EGEPCNRCQICESANNNSLIDIIEI---DAASNNSVDDVRELRDNIIYAPSICKYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NALLKTLEEPP+ F LAT EP ++ AT+ SRC+ P + Sbjct: 125 DEVHMLSGSAFNALLKTLEEPPSHAIFILATTEPNKIPATILSRCQRFDFKRIPSKVISQ 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD---NWQARETLCQALAYSVPS 226 + + + A+ R GS A+++ + N + +V Sbjct: 185 NIGKIAKDSNINIENRAIAMIARHGNGSMRDAISILEQCVSYNDVLTYDDVCDILGTVND 244 Query: 227 GDWYSLLAALNHEQAPARLH-----------------WLATLLMDALKRH---HGAAQVT 266 Y+L+ +N A ++ + + L D + + ++ Sbjct: 245 DTLYTLVKRINDRNAKEVINQIDKLMLYGIDVSNLIKAMLSFLRDIVIYKTCGTESEEIL 304 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 ++ + + A+ S L + + ++ ++ + +L +L++ + P Sbjct: 305 ETEINDKILK-ASEFDMSFLSNAIEKLIDLQGKIRYAQ--SPRILFEITVLKL---MNPE 358 Query: 327 VVLPVPHL 334 + + + Sbjct: 359 ISPDIDSI 366 >UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Tax=Cyanobacteria RepID=Q8DJU0_THEEB Length = 603 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 81/356 (22%), Positives = 126/356 (35%), Gaps = 43/356 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-- 52 ++ P D L + R A L G G + L++ L C + Sbjct: 9 KYRPQRFSDLVGQGAIATTLTQALLKERIAPAYLFCGPRGTGKTSSARILAKSLNCLRSS 68 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + GT D + + GVD +RE+ EK KV Sbjct: 69 KPTPDPCGQCEVCRQVANGTSLDVIEI---DAASHTGVDNIRELIEKAQFAPVQCRYKVY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ +A NALLKTLEEPP + F LAT +P+R+L T+ SRC+ P Sbjct: 126 VIDECHMLSVSAFNALLKTLEEPPPQVVFILATTDPQRVLPTIISRCQRFDFRRIPLGEM 185 Query: 173 VTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ---ALAYSV 224 V L ++ + +AL +LS G A +L + + L +V Sbjct: 186 VAHLQNIADKEQIDIEPEALTLVAQLSQGGLRDAESLLDQLSLYPERITVEQVWQLTGAV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQV-- 265 P D LL A+ A + L LA+L D L + Sbjct: 246 PEQDLRQLLGAIARRDAVSVLEHTRQLLERGRDPLTILQNLASLYRDLLLAKTVPQRRDL 305 Query: 266 --TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + + LA S + + Q+ L + +L + Sbjct: 306 VALTAETWQALIALAEAWSVEEILHAQEHLRTCEGQIKQSNQ--PRLWLEISILGL 359 >UniRef50_Q2RZH6 DNA polymerase III, subunits gamma and tau, putative n=2 Tax=Rhodothermaceae RepID=Q2RZH6_SALRD Length = 728 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 79/365 (21%), Positives = 129/365 (35%), Gaps = 48/365 (13%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P E L + + R HA L G+G L++ + C+ P Sbjct: 12 KYRPSLFTEVVAQEHVTETLKNAIRMERLAHAYLFSGPRGVGKTTAARILAKAINCETPR 71 Query: 54 ----QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 G + C C C+ +AG + + + + VD +RE+ EK+ + Sbjct: 72 EEREDGAEPCCECDSCESFEAGRSLNVFEM---DAASNNKVDDIRELREKVRIPPQGDQK 128 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 KV + + +L+ A NALLKTLEEPPA F AT EP ++L T+ SRC+ P Sbjct: 129 KVYILDEVHMLSKQAFNALLKTLEEPPAHALFIFATTEPHKVLPTILSRCQRFDFRRIPV 188 Query: 170 QYAVTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQA 219 V L V +++L+ R G+ AL+ F L QA Sbjct: 189 PEIVQRLREICETEGVEADEESLMLLARKGNGALRDALSAFDQALSLCGATLEYGELTQA 248 Query: 220 LAYSVPSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHH-- 260 L V ++ L + + + LA L + L H Sbjct: 249 L-GVVDQDLYFRLTDHVAAQDTAGMIELVRHVVRSGYDLQEMLVGLAEHLRNLLVAHSLG 307 Query: 261 -GAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 A + A+ A + L +L + + L + LL++ Sbjct: 308 GEALEEVAESTRTRYADEAERFDEADLLRLLTMAADTEDDIKQSPQ--PRLTLETTLLKM 365 Query: 320 EHYLQ 324 + Sbjct: 366 AQLRR 370 >UniRef50_C4G1W4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1W4_ABIDE Length = 522 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 120/358 (33%), Gaps = 43/358 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + HA + G G ++ ++ + C+ + Sbjct: 9 KFRPKGFDEVKGQDSVVTVLKNQIKHEKIGHAYMFSGTRGTGKTSVAKIFAKAVNCENTK 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + GVD +REV E++ KV + Sbjct: 69 DGSPCGVCETCKKIGEGRTLDVIEI---DAATNNGVDNMREVIEEVKYSPTDTKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F LAT EP ++L T++SRC+ + + Sbjct: 126 DEVHMLSSGAFNALLKTLEEPPEYAIFILATTEPHKVLPTIKSRCQKYDFRRISIETISD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARET-----LCQALAYSV 224 L T ++AL R GS AL+L + + + SV Sbjct: 186 RLKELMDKEGNTYEEEALKFIARKGDGSMRDALSLLDQCLAFSFDEKLTYDKVLNVLGSV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHWLAT-----------------LLMDALKRH----HGAA 263 + + L A+ + + L Sbjct: 246 DTDLFNKLYIAIKRGDVTTCMDIAEEISMNGIDIGQFTLDFTWYFRNLLLLRVSKAAADR 305 Query: 264 QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 + D + E+A + L + + + T ++ + L+++ Sbjct: 306 IEISTDKLAELKEVAKIGEENDLYRYIRIFSKLSADIKYST--SKRAELEIALIKLCR 361 >UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E6B7 Length = 834 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 118/352 (33%), Gaps = 39/352 (11%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + R HHA L G+G + ++ L C Sbjct: 9 KWRPNKFSELVGQEHVVTAISNALDNNRLHHAYLFTGTRGVGKTTIARIFAKSLNCDTGL 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + VD RE+ + + G KV + Sbjct: 69 SANPCGECGTCRDIEQGRFVDLLEI---DAASRTKVDDTRELLDNVQYRPTQGDYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L + Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKALSREQIQQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARET----LCQALAYSVP 225 L + AL R + GS AL+L Q + + + Sbjct: 186 QLSHVLTQEHINHEPAALAQLARAANGSMRDALSLTDQAIAQGNNQISTVVVSDMLGLMD 245 Query: 226 SGDWYSLLAALNHEQ-----------------APARLHWLATLLMDALKRHHGAAQVTNV 268 +L ++ L L +LL Sbjct: 246 KNQILKILHSMIEGDKIAVFEQVESLAQTSPNYAHVLDELMSLLHQIAMTQVVPEVCKLE 305 Query: 269 DVPGL-VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + + +LA +S +Q + + ++ L ++ +LLR+ Sbjct: 306 TISARAIYKLAGSISKEHVQLLYQMALNGKQDL--PHSMDGRSGFEMVLLRM 355 >UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Tax=Gloeobacter violaceus RepID=Q7NK69_GLOVI Length = 632 Score = 360 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 79/354 (22%), Positives = 125/354 (35%), Gaps = 41/354 (11%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P P L + +AGR HA L G G +++ L C Sbjct: 9 KYRPQRFGDVVGQGPIVTTLTNALKAGRIAHAYLFTGSRGTGKTTTARLIAKALNCIHGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + G+ D + + GVD +RE+ E+ KV + Sbjct: 69 TPDPCGRCEQCLAIATGSALDVIEI---DAASNTGVDNIRELIERAQFAPVQSRQKVYIL 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA N LLKTLEEPPA F LAT +P+++L T+ SRC+ P V Sbjct: 126 DEVHMLSSAAFNCLLKTLEEPPAHVTFVLATTDPQKVLPTVISRCQRFDFRRIPLTDMVK 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG---DNWQARETLCQALAYSVPS 226 L ++ + +A+ +++ G A +L L +VP Sbjct: 186 HLEEIAWKEDIDIEHEAVELVAQIAQGGLRDAESLLDQLALLEGTIGAERIWQLVGAVPE 245 Query: 227 GDWYSLLAALNHEQ-----------------APARLHWLATLLMDALKRHHGAAQVTNVD 269 + + + L L D L H + V Sbjct: 246 RELLVIGECIQAGDSTRLIEQVRRLLDSGKEPLQVLQDLLGFYRDLLIAHTAPDRRDLVA 305 Query: 270 VP----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 V + E A LS +L A+ + Q+ + T L + LL + Sbjct: 306 VTAASWQQMCERAKTLSIPQLLALQERLRQAEPQIKTSTQ--PRLWLEVGLLGL 357 >UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Bacilli RepID=Q1WSU3_LACS1 Length = 579 Score = 360 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 129/356 (36%), Gaps = 41/356 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P D + L + + HA L G G + ++ + C+ + Sbjct: 10 WRPQRFMDLVGQEMVTKTLKNAIITHQTSHAYLFTGPRGTGKTSAAKIFAKAINCRFSKE 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G D + + GV+ +R++ +K+ KV + Sbjct: 70 GEPCNECETCKAITEGRLNDVIEI---DAASNNGVEEIRDIRDKVKYAPTEADYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPPA F LAT EP ++ AT+ SR + + + Sbjct: 127 EVHMLSTGAFNALLKTLEEPPANVVFILATTEPHKIPATIISRTQRFDFKRITAESILQR 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQG----------------DNWQARE 214 + + V AL + + G AL+L + Sbjct: 187 MIYILDQKNVDYDDKALKVIAKAAEGGMRDALSLLDQVISFGDNNVTLDNALLVTGSVTQ 246 Query: 215 TLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 V S D + L + + A + L D L V++ + Sbjct: 247 ESLFNYLKFVLSKDTTNALKEIQQIVEQGKDANRLIEDLINYCRDLLLYQQAPEMVSDGE 306 Query: 270 ---VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 + EL+ ++ ++L I+ ++ +E + + ++ + + L +++ Sbjct: 307 LGLLDDKFKELSQQINVTQLYQIIDELNKQQENMRFSS--HQSIYLEVLTVKLTQL 360 >UniRef50_A5VIC2 DNA polymerase III, subunits gamma and tau n=39 Tax=Lactobacillales RepID=A5VIC2_LACRD Length = 611 Score = 360 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 65/368 (17%), Positives = 130/368 (35%), Gaps = 41/368 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P D L + + HA L G G + ++ + C + Sbjct: 10 WRPQRFDDLVGQQIVTRTLKNAIITHQISHAYLFAGPRGTGKTSAAKIFAKAVNCHHSKD 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G D + + GV+ +R++ +K KV + Sbjct: 70 GEPCNECEICKAITNGQLNDVIEI---DAASNNGVEEIRDIRDKAKYAPTQADYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPPA F LAT EP ++ T+ SR + + A Sbjct: 127 EVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPLTIISRVQRFDFRRISAEDAFNR 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPS 226 + ++VT + AL + G AL++ + + + + SV Sbjct: 187 MKYILDQKKVTYDEKALWVIANAAEGGMRDALSILDQVLSFSDNEVKLDDALLVTGSVTK 246 Query: 227 GDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAAQVTNV- 268 ++ + + L + + D L + ++ Sbjct: 247 QLLKKYFLEISKHEGATALDTMKDILDEGKDGQRFIEDLISFIRDILLYQESPSLISVES 306 Query: 269 --DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 E+ S + L ++ ++ +I+E++ T + ++ + L +++ Sbjct: 307 TGLKQEDFEEIVQLASSATLYRMIDELNNIQEEMRFTT--HPDVYLEVLTIKLAQIEPQK 364 Query: 327 VVLPVPHL 334 + P + Sbjct: 365 NLQSAPAV 372 >UniRef50_Q47HW9 AAA ATPase, central region n=3 Tax=Betaproteobacteria RepID=Q47HW9_DECAR Length = 537 Score = 360 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 87/364 (23%), Positives = 136/364 (37%), Gaps = 40/364 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G L L++ L C+ Sbjct: 9 KWRPRNFSTLVGQEHVVRALTHALSEQRLHHAYLFTGTRGVGKTTLARILAKSLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C CQ + +G D + VD +R++ E G KV + Sbjct: 69 TATPCGTCSACQEIDSGRFVDLLEV---DAATNTRVDEMRQLLENAVYAPTRGRFKVYVI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+++A NA+LKTLEEPP F LAT +P+++ T+ SRC L P Sbjct: 126 DEVHMLSNSAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPVLAITG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + Q AL R +AGS AL+L + E +++ +V Sbjct: 186 HLGHILQAEGIPFDQPALALVARSAAGSMRDALSLLDQAIAHGAGRVEEAQVRSMLGTVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQV------------------TN 267 +++L AL+ + A L A L + +L ++ + Sbjct: 246 QDYLFTILEALHGAEPSALLQVAADLGIRSLSFSAALQELGALLTRLQIAQCVPGAIDDD 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + LA LSP +Q V R +L + LLR+ +P Sbjct: 306 EPERDRLKGLAAALSPEFVQLAYQIVNAGRNELAAAPDEYA--GFVMTLLRLYT-FRPST 362 Query: 328 VLPV 331 V V Sbjct: 363 VADV 366 >UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clostridiales RepID=B0TAU1_HELMI Length = 606 Score = 360 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 84/355 (23%), Positives = 124/355 (34%), Gaps = 42/355 (11%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P L + R HA L G G L++ L C Sbjct: 10 WRPQSFQELVGQEHVSRTLQNAIAYQRIAHAYLFCGPRGTGKTTTAKILAKALNCSGHGP 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G D + + GVD +RE+ E++ + G KV + Sbjct: 70 VRPCNDCLNCRAINTGASHDVLEI---DAASNRGVDEIRELREQVKYAPQEGNYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPPA F LAT E ++ AT+ SRC+ V Sbjct: 127 EVHMLTTEAFNALLKTLEEPPANVIFVLATTEVHKIPATILSRCQRFDFRRLGVNEIVDR 186 Query: 176 LSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVPS 226 L R E+ S++ L R + G AL + A + A+ +V Sbjct: 187 LERICRHHEIAASRETLSFIARKAEGGMRDALGILDQCVSYAGNEIDSGDVTAILGAVAD 246 Query: 227 GDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAAQVTNVD 269 Y + L ++ L L L D L VD Sbjct: 247 EILYDMTQGLAEDRLSDVLMQLNDLINRGKEVRPLTRDLLGHYRDRLILRTVPGAADLVD 306 Query: 270 VPGLVAELANH----LSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIE 320 +P +A S S LQA + + + T + +L+ +RI Sbjct: 307 MPDDIAAKVKETGHVYSVSDLQACIALLSQAENDMKWTT--HPRILLEVAFVRIA 359 >UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C334AE Length = 726 Score = 360 bits (924), Expect = 5e-98, Method: Composition-based stats. Identities = 77/362 (21%), Positives = 128/362 (35%), Gaps = 43/362 (11%) Query: 2 RWYPWLRP-------DFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ--Q 52 ++ P L + ++ R HA L G G + ++ + C Sbjct: 10 KYRPQTFDGLVGQKSIVLTLSNAIRSQRISHAYLFTGPRGTGKTSTARIFAKSINCLASD 69 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG+C CQ + G+ D + + GVD +RE+ E+ K+ Sbjct: 70 APSISPCGNCEACQTINKGSSLDVIEI---DAASNTGVDNIREIIEQAKFAPMQLRYKIY 126 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 V + +L+ AA NALLK LEEPP F LAT +P+R+L T+ SRC+ + Sbjct: 127 IVDECHMLSTAAFNALLKILEEPPKHVIFILATTDPQRVLPTIISRCQRFDYRRIAIEEI 186 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDN---WQARETLCQALAYSV 224 V L + + DAL ++S G A +L + + L + Sbjct: 187 VQHLGKIAKEENINIEIDALNLVAKISNGGLRDAESLLDQLSLFTGKINSEKVNDLVGLI 246 Query: 225 PSGDWYSLLAAL-----------------NHEQAPARLHWLATLLMDALKRHHGAA---- 263 D SLL A+ ++ L +A ++ L Sbjct: 247 SERDLLSLLQAIRSNNSKLIIEFCGQLINKGKEPLTILQNIANFHLNLLISKVSPQCPEL 306 Query: 264 QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 + + D+ + A R+ + + QL S T L I +LL + Sbjct: 307 TMISKDIWKELCIEAEFWKTDRILKNQQKLRNSEIQLKSTTQ--PYLWIEIILLDLLQEE 364 Query: 324 QP 325 + Sbjct: 365 KE 366 >UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 Tax=Aeromonas RepID=A4SMN2_AERS4 Length = 865 Score = 360 bits (924), Expect = 5e-98, Method: Composition-based stats. Identities = 85/372 (22%), Positives = 133/372 (35%), Gaps = 45/372 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L+ G+G + L++ L C+Q Sbjct: 9 KWRPHTFEQVVGQHHVLTALTNALDQGRLHHAYLLSGTRGVGKTTIARILAKSLNCEQGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D + + V+ RE+ + + G KV + Sbjct: 69 SSHPCGVCDTCREIDQGNFVDLLEI---DAASRTKVEDTRELLDNVQYRPARGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPITILSRCLQFHLKSLDQTQIAK 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ALLA + + GS AL+L N R A+ ++ Sbjct: 186 QLECVLDQEAQPFEPRALLALAKAADGSMRDALSLTDQALAHGNGSVRLESVLAMLGTLD 245 Query: 226 SGDWYSLLAALNHEQAPARL-----------------HWLATLLMDALKRHHGAAQVTNV 268 + LL A+ + A A + L LL A V Sbjct: 246 HRHLHQLLEAILRQDAAATMAKITEIATLGPDFDQLHAELEGLLHRVAMAQLLPATVQEQ 305 Query: 269 -DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI------EH 321 + +LA +SP +Q V R+ L + + LR+ Sbjct: 306 GADAESLLQLAQAMSPEEVQLCYQIVLGGRKDLPWAP--DGRTSLEMTCLRMLAFSPRRE 363 Query: 322 YLQPGVVLPVPH 333 + P + +P Sbjct: 364 AVHPANLTVLPP 375 >UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Tax=Symbiobacterium thermophilum RepID=Q67TJ5_SYMTH Length = 570 Score = 360 bits (924), Expect = 5e-98, Method: Composition-based stats. Identities = 81/359 (22%), Positives = 130/359 (36%), Gaps = 42/359 (11%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P L + GR HHA L+ G G + L++ + C PQ Sbjct: 10 YRPQRFGEVVGQEHITRTLRNAIVQGRLHHAYLLSGPRGTGKTTVARILAKAVNCLNPQD 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + +G D + + G+D +R++ +K+N KV + Sbjct: 70 GEPCNECEACRRITSGEALDLIEI---DAASNRGIDEIRDLRDKVNFAPVELKYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT+ A NALLKTLEEPPA F LAT E ++L T+ SRC+ V Sbjct: 127 EVHMLTEPAFNALLKTLEEPPAHVLFVLATTEKQKLPITILSRCQAFDYRRLSADEIVAR 186 Query: 176 LSR-----EVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQALAYSVP 225 L + S +AL A R + G AL+L + + A+ + P Sbjct: 187 LREVCGKQGLKASPEALAAIARHADGGMRDALSLLDQVMAYAAEGEITLDMTLAVLGTAP 246 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAAQVTN- 267 + +L L A L WL + L D L A Sbjct: 247 LDQFLALDGHLLRGDVGAALLWLDEMVRAGKDLRQLVRDYLAHLRDLLLVKLEAGAQVLG 306 Query: 268 --VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 + + A + +L + + +L + LL+ L+R+ Sbjct: 307 LPAEALEQMRARAEPFAERQLIRAIRLLGQAETELRLSP--SPRLLVEVALIRLTGLFT 363 >UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 Tax=Nostocaceae RepID=B2J7Q6_NOSP7 Length = 707 Score = 359 bits (923), Expect = 6e-98, Method: Composition-based stats. Identities = 82/375 (21%), Positives = 128/375 (34%), Gaps = 47/375 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-- 52 ++ P L + + A L G G + L++ L C + Sbjct: 9 KYRPKSFAELVGQEAIATTLTNAIGTSKIAPAYLFTGPRGTGKTSSARILAKSLNCLKSD 68 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 + CG C CQ + G D + + GVD +RE+ EK KV Sbjct: 69 RPTAEPCGVCDVCQGITKGYALDVIEI---DAASNTGVDNIRELIEKAQFAPVQCRYKVY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ A NALLKTLEEPP F LAT +P+R+L T+ SRC+ + Sbjct: 126 VIDECHMLSTQAFNALLKTLEEPPRHVVFVLATTDPQRVLPTIISRCQRFDFRRIQLEAM 185 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDN---WQARETLCQALAYSV 224 V L + +S +A+ +LS G A +L L +V Sbjct: 186 VKHLSAIASKENIHISPEAVTLVAQLSQGGLRDAESLLDQLGLLAGVVTPDRVWDLVGTV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTN 267 D LL A+ ++ A L LA D L + Sbjct: 246 SEQDLLGLLNAIAQDKPEAVLDSTHKILDRGREPLTFLQNLAAFYRDLLIAKTAPNRHDL 305 Query: 268 VDVPGL----VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI---- 319 V + E A + + + A + Q+ + T L + LL + Sbjct: 306 VACTQQTWTALVEFAQYFDMTMILAGQEHLRKAEVQIKNSTQ--PRLWLEVTLLGLLPSA 363 Query: 320 EHYLQPGVVLPVPHL 334 +QP P + Sbjct: 364 TTNIQPQAPNIAPRV 378 >UniRef50_C3XBH9 DNA polymerase III subunit gamma n=2 Tax=Oxalobacter formigenes RepID=C3XBH9_OXAFO Length = 604 Score = 359 bits (923), Expect = 7e-98, Method: Composition-based stats. Identities = 81/367 (22%), Positives = 132/367 (35%), Gaps = 39/367 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + ++ R HHA L G+G L L++ L C++ Sbjct: 9 KYRPKNFENIVGQDHVVRALSHALESQRLHHAYLFTGTRGIGKTTLSRILAKSLNCEKGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + + DY + + G+ + ++ E+ KV + Sbjct: 69 TASPCGICEACKAIDSDRFVDYVEM---DAASNRGIADMLQLLEQAVYAPTAARFKVYMI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NA+LKTLEEPP F LAT +P+++ T+ SRC L P + V Sbjct: 126 DEVHMLTSQAFNAMLKTLEEPPEYVKFILATTDPQKIPVTVLSRCLQFNLKQMPVSHIVD 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 LS + + AL + + GS AL+L + Q + ++ Sbjct: 186 HLSRILELENIPFEKPALRLLAQGAQGSMRDALSLADQAIAYTAGHVTDEAVQDMLGALD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDA-LKRHHGAAQVTNVDVP--- 271 LL L + + L + L D L A + D P Sbjct: 246 QTYLIRLLDHLANRDGTSLLKVADEMAFRSLSYSTALQDLGLLLQKIAMIQSVPDYPLDD 305 Query: 272 ----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 ++ LA SP LQ H R +L + LLR+ + Sbjct: 306 IADSDNLSRLAAIFSPEELQLYYQIAIHGRNELGLAPDEYA--GFSMTLLRMLAFSPDKG 363 Query: 328 VLPVPHL 334 +P + Sbjct: 364 NRSIPQI 370 >UniRef50_Q1ATA7 DNA polymerase III, subunits gamma and tau n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATA7_RUBXD Length = 567 Score = 359 bits (923), Expect = 7e-98, Method: Composition-based stats. Identities = 81/356 (22%), Positives = 128/356 (35%), Gaps = 41/356 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 RW P P L + + GR HA L G G + L+ L C Q Sbjct: 9 RWRPRTFGEIAGQEPVVRTLRRAIETGRVAHAYLFSGPRGTGKTSTAKVLAMGLNCAQGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + AG+ D + + G+D +RE+ +++N G AKV + Sbjct: 69 TPEPCGRCESCRSIVAGSSMDVIEM---DAASNRGIDEIRELRDRVNLAPAAGRAKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLK LEEPP F LAT E ++L T+ SRC+ P V Sbjct: 126 DEVHMLTTEAFNALLKMLEEPPEHVVFVLATTEKHKVLPTIISRCQSFDFRRPGVGTLVE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + ++AL A R S GS A + + L + L S Sbjct: 186 KLSEIARAEGIEAEREALTAIARASGGSFRDAEGMLDQISSFSEGRVTVALVRELLGSAG 245 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAA---QV 265 AL+ +A L L + L + H Sbjct: 246 PEMLAETADALHERRAADALRVVDRLSSEGRDLGQFAAELISHLRVLMLLPHAPEAALAE 305 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 + + E A + ++ + ++ G + +L + L++ Sbjct: 306 AGPEERPALEEQARRIPTGETVRMIEALGETSGRIRR--GGDPKLELELCFLKLAR 359 >UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C4ZNJ5_THASP Length = 716 Score = 359 bits (922), Expect = 8e-98, Method: Composition-based stats. Identities = 88/363 (24%), Positives = 135/363 (37%), Gaps = 39/363 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L G+G + L++ L C+ Sbjct: 9 KWRPKSFGTLVGQEHVVRALTHALATGRLHHAWLFTGTRGVGKTTISRILAKALNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + A PDY + + GV+ + + +K G KV + Sbjct: 69 TAEPCGICDACRAIDADRFPDYVEM---DAASNRGVEEMAALLDKAVYAPVQGRFKVYMI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NA+LKTLEEPP F LAT +P+++ T+ SRC L P+ + V Sbjct: 126 DEVHMLTGHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPQGHIVD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + EV AL + ++GS AL+L + E + +V Sbjct: 186 HLTRILQAEEVAFEPGALRHLAKAASGSMRDALSLLDQAIAHGAGRVEEEQVSHMLGTVG 245 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNV 268 Y++L AL PA L LATL+ + A + + Sbjct: 246 DDHLYAVLDALAAGDVPALLAVADGMEARSLSFDAALQALATLVHRVALAQYAPAAIADE 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 + LQ H R++L T LLR+ H +P Sbjct: 306 LERARILGYVERFDAEFLQLAYQVAVHGRDELPLAPDDYT--GFTMTLLRL-HAFRPEQP 362 Query: 329 LPV 331 + Sbjct: 363 AAL 365 >UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RMH2_MOOTA Length = 589 Score = 359 bits (922), Expect = 8e-98, Method: Composition-based stats. Identities = 84/353 (23%), Positives = 126/353 (35%), Gaps = 43/353 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + + GR HA L G G + L+R + C P+ Sbjct: 10 QWRPRTFAEVVGQEHITRTLRNALRTGRLVHAYLFCGPRGTGKTSTAKILARAINCLAPR 69 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ + AG D + + G+D +R + EK+ G KV + Sbjct: 70 EGEPCNECANCRRILAGNSLDVLEM---DAASNRGIDEIRNLIEKIPLGPVEGRYKVYII 126 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPPA F LAT EP ++L T+ SRC+ P Q Sbjct: 127 DEVHMLTQEAFNALLKTLEEPPAHAVFILATTEPRKVLPTILSRCQRFDFHPLTVQAIAG 186 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQG-----------------DNWQA 212 L V + AL R +AG AL+L A Sbjct: 187 RLQEVAAANGVEIEPGALSLLSRKAAGGLRDALSLLDQILASGTRGPVTAGQVAVTLGTA 246 Query: 213 RETLCQALAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRH----HGAA 263 R AL ++ +GD +L ++ + L L + L G+ Sbjct: 247 RLDTLLALTDALATGDGAGVLNLVDKALASGIEPRRLLEDLLDHTRNLLLLKVDPGAGSL 306 Query: 264 QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLL 316 + VA A RL ++ + L +++ L Sbjct: 307 TGLLPEEVEQVAAQARQFDHHRLLDLMERLQQGGAALRRSNQ--PRVILEMTL 357 >UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Tax=Bacteria RepID=B4RU47_ALTMD Length = 930 Score = 359 bits (922), Expect = 8e-98, Method: Composition-based stats. Identities = 74/352 (21%), Positives = 127/352 (36%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + R HHA L G+G + S+ L C++ Q Sbjct: 9 KWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSKSLNCEEGQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G CG C C+ ++ G + D + + V+ RE+ + + G KV + Sbjct: 69 GANPCGQCNTCKEIEQGNYVDLLEI---DAASRTKVEDTRELLDNVQYKPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L + V Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKAMSREQIVG 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 L ++ AL R + GS AL+L Q ++ + + Sbjct: 186 QLTHILQQEQLAFEAPALALLARAAQGSMRDALSLTDQAIAQGGNQVMASVVTDMLGLMD 245 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQV-TN 267 ++ A+ ++ L LA+LL Sbjct: 246 KNQLLKVIHAVVNKSPAEVLQLVNDIAEQAPDYDNVHSELASLLHQIALTQWVPEACKLE 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + +LA +S ++Q + R+ L + + L+R+ Sbjct: 306 TTSAKAIFQLAKTISAEQVQLLYQIALQGRKDL--PFAADGKSAFEMTLMRM 355 >UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=15 Tax=Betaproteobacteria RepID=Q1LLG8_RALME Length = 795 Score = 359 bits (922), Expect = 9e-98, Method: Composition-based stats. Identities = 87/365 (23%), Positives = 129/365 (35%), Gaps = 45/365 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + + R HHA L G+G L L++ L C P Sbjct: 9 KWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAKALNCTGPD 68 Query: 55 G-----HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 G + CG C+ C + +G DY + + GVD + ++ +K G Sbjct: 69 GNGGITAQPCGQCKACTEIDSGRFVDYIEM---DAASNRGVDEMAQLLDKAIYAPTAGRF 125 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 KV + + +LT+ A NA+LKTLEEPP F LAT +P+++ T+ SRC L P Sbjct: 126 KVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP 185 Query: 170 QYAVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQAL 220 + V+ L ++ AL + + GS AL+L Q E + + Sbjct: 186 GHIVSHLDHILAQEGISHDGSALRLLAQAAHGSMRDALSLTDQAIAYSAGQVSEEAVRGM 245 Query: 221 AYSVPSGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAA 263 ++ LL AL E L L +LL A Sbjct: 246 LGAIDQSYLVQLLDALAAEDGATMLGIADSMADRSLSFAGALQDLGSLLHKVALAQAVPA 305 Query: 264 QVTNV-DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 V + V LA Q R +L T LLR+ Sbjct: 306 SVQDEWPEAEDVRRLARQFDAQETQLFYQIANLGRSELALAPDEYA--GFTMTLLRML-A 362 Query: 323 LQPGV 327 +P Sbjct: 363 FRPST 367 >UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dictyoglomus RepID=B5YCC7_DICT6 Length = 521 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 75/368 (20%), Positives = 125/368 (33%), Gaps = 44/368 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L S + HA L G G + L++ L C Q Sbjct: 8 KWRPQTFEEVVGQEHIVITLQNSLRYNHIGHAYLFAGPRGTGKTTIARILAKALNCVQGP 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C + G D + + G+D +R++ EK KV + Sbjct: 68 TPTPCLKCESCVEIAEGRSIDVIEI---DAASNRGIDEIRDIREKARLLPVRDRYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NALLK LEEPP F +AT EP+++ T+ SRC+ + Sbjct: 125 DEVHMLTNEAFNALLKILEEPPEHVVFIMATTEPQKVPLTILSRCQRFDFRRLTRDEVIK 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +S+ AL S GS A++L + + + E L + L Sbjct: 185 QLAKIAEKEGAKISEGALRLIAIQSQGSMRDAISLLEQLLVYSDQEITEELARNLLGLPT 244 Query: 226 SGDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHHGAA----Q 264 Y+ AL + L + L Sbjct: 245 YEFTYNFAKALGEYNILEGYSLLQQIFQMGKNPQQFAKELLQHFRNLLLLKADERIGNLL 304 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 + + + + RLQ I+ + + +L +T N L++ +LL + +++ Sbjct: 305 SLTQEEFEELMQETKLYTIKRLQDIIDQLLILENRLRDLT--NAPLVMEMILLPL--FMK 360 Query: 325 PGVVLPVP 332 P Sbjct: 361 EETAETQP 368 >UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and tau n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C4B Length = 522 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 65/356 (18%), Positives = 129/356 (36%), Gaps = 43/356 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + R HA L G G +R + C+ Sbjct: 8 KYRPQKFSDMVGQEHITKTLKNQIKLNRIAHAYLFTGSRGTGKTTAAKIFARAINCKNSV 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K C C C+ + G + L + GVD +R++ E++ +G KV + Sbjct: 68 DGKPCEKCVVCKEIAEGAFVNIIEL---DAASHNGVDDIRQINEEVLYTPAVGVYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NA+LKTLEEPP F LAT +P+++ AT+ SRC+ Sbjct: 125 DEVHMLSPAAFNAMLKTLEEPPPYVVFILATTDPQKIPATVLSRCQRFDFRRISTSDICD 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARET-----LCQALAYSV 224 L + + ++A+ RL+ G AL++ + + L +V Sbjct: 185 CLLDYMQRENIEIEKEAVELIARLADGGMRDALSILEQCISFYIDEKITHSKVLKLVGAV 244 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTN 267 + + ++ A+ A + L + L + Sbjct: 245 DNALLFEMMNAVIEMDAAKAIAVCNEINQQGRNIKQFAKDLLMHTRNLLIAKTTEQKTEI 304 Query: 268 VDVPG----LVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 +D + + AN L+ + + + + ++ + T + + ++++ Sbjct: 305 LDYTQEHVRELTQQANELAIETIFRYIKNFTELDMEMKTSTF--PRITLEVAVIKL 358 >UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WR18_9SYNE Length = 745 Score = 358 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 80/353 (22%), Positives = 130/353 (36%), Gaps = 43/353 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P + L + + R A L G G + L++ L C Sbjct: 8 KYRPQTFSQLVGQDAIAQTLTHALEQKRIAPAYLFCGPRGTGKTSSARILAKSLNCLSSE 67 Query: 54 -QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 + CG C CQ + G D + + GVD +RE+ E+ K+ Sbjct: 68 VPTAQPCGQCDVCQAVIQGIALDVVEI---DAASNTGVDNIRELIERSQFAPVQCRYKLY 124 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ AA NALLKTLEEPP+ F LAT +P+R+L T+ SRC+ P Sbjct: 125 VLDEVHMLSTAAFNALLKTLEEPPSRVVFVLATTDPQRVLPTIISRCQRFDFRRIPLPSM 184 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ---ALAYSV 224 + L + + A+ ++S G A +L + QA + + L +V Sbjct: 185 IKHLSYISAEEAIQIEPSAIQLVAQISQGGLRDAESLLDQLSLQANKITVETVWDLVGAV 244 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTN 267 P D +L+ A+ + + A L L D L +V Sbjct: 245 PERDLLNLVRAIAADDSTALLERVRHLMDKGREPLIVLQSLVGFYRDLLIAKRAPKRVDL 304 Query: 268 VDVP----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLL 316 V + + A LS + L A + Q+ + T L + L Sbjct: 305 VAITSPTWAEMIPFAQKLSAAALLASQQKLQSAEVQIKNTTQ--PRLWLEITL 355 >UniRef50_A6GQQ4 AAA ATPase, central region n=1 Tax=Limnobacter sp. MED105 RepID=A6GQQ4_9BURK Length = 586 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 80/359 (22%), Positives = 124/359 (34%), Gaps = 39/359 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + R HHA L G+G + L+R + C+Q Sbjct: 12 KWRPRDFDSLVGQAHVVKALSHALDNQRLHHAYLFTGTRGVGKTTIARILARAVNCEQGI 71 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C+ C + G D + VD +R + E G KV + Sbjct: 72 SRTPCGKCQACVEISQGRFVDLLEV---DAATNTRVDEMRALLENAMYAPTAGRYKVYVI 128 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPP F LAT +P+++ AT+ SRC L P Sbjct: 129 DEVHMLSTSAFNAMLKTLEEPPGHVLFILATTDPQKIPATVLSRCLQFALRQLPPDQLAD 188 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L ++ AL + + GS AL+L E + + ++ Sbjct: 189 HLAHILSEEQIAFEPGALRLLAKAARGSVRDALSLTDQAIAYSAGHVTEDTVRTMLGAID 248 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNV 268 + LL AL A L LA + H + Sbjct: 249 QQVVHQLLQALAQGDGKALLELSNALAAASAPFGAILDELAAIAYRLSVAHFAGGLDADD 308 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + L LQ I H R +L + + + L+R+ +PG Sbjct: 309 PDQAALQNLQGAFGAEDLQLIYQIATHARAELHLAPEEH--IGFSMALVRML-AFKPGG 364 >UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBF2_9BACT Length = 638 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 70/370 (18%), Positives = 130/370 (35%), Gaps = 45/370 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P L + ++G+ HA L G+G ++ + C+ P Sbjct: 10 KYRPMTFDSVVGQSALTTTLKNAVKSGKLAHAYLFCGPRGVGKTTCARIFAKAINCEHPR 69 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + ++C C C+ + + L + GVD ++ + E+ ++G KV Sbjct: 70 EDGEACNECESCRAFNEQRSYNIFEL---DAASNNGVDQIKVLMEQTRIPPQVGKYKVFI 126 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ AA NA LKTLEEPP F LAT E ++L T+ SRC+++ + Sbjct: 127 IDEVHMLSTAAFNAFLKTLEEPPQHVIFILATTEKHKILPTILSRCQIYDFERMTVANTI 186 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQ-----ARETLCQALAYS 223 L + + AL + G AL++F + + + L Sbjct: 187 NHLKMVAEKEGIQYEEQALAVIAEKADGGMRDALSIFDQAASFCMGNITYQKVIEDLN-V 245 Query: 224 VPSGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHG---AA 263 + S +++ L+ + + LA + + + Sbjct: 246 LDSDNYFRLVDLALENKVAEMMVTLDGILNRGFDGGNMIQGLAQHVRNVMMAKDPQTLPL 305 Query: 264 QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 T+ D A L L + + N+ LL+ L++I Sbjct: 306 LETSDDQKAKFQAQAQKAPTPFLYKALELMNQC--DIHYRASSNKRLLVELTLIQIGQIT 363 Query: 324 QPGVVLPVPH 333 QP VP Sbjct: 364 QPE-DQDVPS 372 >UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subunits n=3 Tax=Bacillus RepID=A8FAE4_BACP2 Length = 570 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 122/357 (34%), Gaps = 41/357 (11%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P + L + + HA L G G + ++ + C++ Sbjct: 10 FRPQVFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAKAVNCEKSPV 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G+ D + + GVD +R++ +K+ KV + Sbjct: 70 SEPCNECDACKGITNGSISDVIEI---DAASNNGVDEIRDIRDKVKFAPSAVTYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEPPA F LAT EP ++ T+ SRC+ + V Sbjct: 127 EVHMLSIGAFNALLKTLEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITTKDIVGR 186 Query: 176 LS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----------------NWQARE 214 + + + + +L + G AL+L + Sbjct: 187 MQKIVDAESLNVQEGSLEIIASAADGGMRDALSLLDQAISFSGEQLTIDDALLITGAVSQ 246 Query: 215 TLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVTNVD 269 LA ++ + L LN + A + + D L ++ Sbjct: 247 QFISQLAEAIFDQNIAVALDTLNELLQQGKDAAKLIEDMIFYFRDMLLYKTAPDLEGVLE 306 Query: 270 V---PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 L++ ++P L + + +++ + + ++++ Sbjct: 307 KVKVDENFVTLSDRVTPQFLYETIEVLNKSHQEMKWTN--HPRIFFEVAVVKLCQAT 361 >UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKH0_FIBSS Length = 575 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 75/356 (21%), Positives = 124/356 (34%), Gaps = 42/356 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + Q GR HHA L G+G L+R L C+ Sbjct: 9 KWRPQSFSDMVGQEHIAKTLENAIQGGRLHHAFLFTGTRGVGKTTSARILARTLNCKGSD 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G D Y + + VD +R+V E++ +G K+ + Sbjct: 69 PLHPCGECDSCKDIAGGNPMDVYEI---DAASNTSVDNIRDVIERVQYPPVIGKYKIFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPPA F AT E ++ T+ SR + + Sbjct: 126 DEVHMLSTGAFNALLKTLEEPPAHVIFIFATTEVNKVPQTILSRVQRFDFKRLTVDQIRS 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L + + +AL + GS L F + +++ P Sbjct: 186 RLRYICEQEGIKATDEALDIFAEKADGSMRDGLTYFDQAYAFTGNEMTAESVRSVLGIPP 245 Query: 226 SGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHGA----AQ 264 ++SL+ ++ + L L + L A A Sbjct: 246 VELFFSLIQSIENHDIKGCFRMVDDAVKIGIEFIPLLDGFGKFLRNLLYARLDAFTPDAL 305 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIE 320 ++ A L+ + I + ++ L T N LL+ R+ Sbjct: 306 NITEELYTKYKSCAQSLTNGDILRISKMLIDLQGTLRYST--NPRLLVETTFARMA 359 >UniRef50_Q6FAW7 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=Q6FAW7_ACIAD Length = 711 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 73/359 (20%), Positives = 128/359 (35%), Gaps = 41/359 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L ++ + GR HHA L G+G + L++ L C+ Sbjct: 8 KYRPRNFIELVGQNHVSRALTSALERGRLHHAYLFTGTRGVGKTTIARILAKCLNCETGI 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + G D + + V+ RE+ + + G KV + Sbjct: 68 TSTPCEVCATCKAVNEGRFIDLIEI---DAASRTKVEDTRELLDNVPYAPTQGRFKVYLI 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F AT +P++L T+ SRC L P + Sbjct: 125 DEVHMLSTHSFNALLKTLEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVDEITS 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +DA+ + GS AL+L + + + Sbjct: 185 HLTTILAKEQIEADKDAIWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEMLGLID 244 Query: 226 SGDWYSLLAALNHE-----------------QAPARLHWLATLLMDALKRHHGAAQV--T 266 Y L+ A++ L L + L + + Sbjct: 245 RTIIYDLILAIHQNQTARVSQLLMQFRQQALDVSLVLDQLISTLHELALLQYLPELSLKY 304 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + ++ + +LA +S LQ C R +L + +E +LR+ +P Sbjct: 305 SEEINQKILKLAKIVSAQDLQLYYQIACKGRSELQLS--VTQEQGFEMCVLRLL-AFRP 360 >UniRef50_A4C5P9 Putative DnaX, DNA polymerase III, gamma/tau subunits n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5P9_9GAMM Length = 820 Score = 357 bits (918), Expect = 2e-97, Method: Composition-based stats. Identities = 78/356 (21%), Positives = 138/356 (38%), Gaps = 47/356 (13%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + LV + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPQNFHQLVGQEHVKQALVNALTQQRLHHAYLFTGTRGVGKTTIARIFAKSLNCELGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C ++AG + D + + V+ RE+ + + G KV + Sbjct: 69 TATPCGQCSACLDIEAGRYIDLLEI---DAASRTKVEDTREILDNVQYAPTRGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L+ Sbjct: 126 DEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLSALSRPQIEQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L ++ +L + + GS AL+L N Q E+ +++ + Sbjct: 186 QLSFVLTEEQIHFEVASLALLAKAADGSMRDALSLTDQAIAQTNGQVNESQVKSMLGLMD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQV-------------------- 265 + LL ++ + L +L+ D +K++ A V Sbjct: 246 ASWAKRLLVSIVDKDGAELL----SLVADLVKQNANAKSVLDDLLSLTHLLLLTQLVPSA 301 Query: 266 --TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 N D + ++ LSP ++Q + ++ L + +L + +LLR+ Sbjct: 302 AAFNEDEADFIDAMSKSLSPEQVQVYYQLLLGGKKDLQWAP--DEKLGLEMVLLRL 355 >UniRef50_C5S1I5 DNA polymerase III subunits gamma and tau n=2 Tax=Actinobacillus minor RepID=C5S1I5_9PAST Length = 698 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 72/355 (20%), Positives = 128/355 (36%), Gaps = 36/355 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + GR HHA L G+G ++ ++ L C+ Sbjct: 9 KWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAKGLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ RE+ + + +G KV + Sbjct: 69 TATPCGECANCKAIEEGRFIDLIEI---DAASRTKVEDTRELLDNVQYKPTVGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALDQTQIAH 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L ++ A+ + + GS +L+L N + + + Sbjct: 186 HLEFILKAEQIPYETAAIEKLAKAAEGSIRDSLSLTDQAIAVTNANVTLSAVSQMLGLID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLA----------TLLMDALKRHHGAAQVTNV----DVP 271 L+ AL + + + LL D + H A + V Sbjct: 246 DHQPLELIMALANADGEKVMAVIQNVAEKGVDWNQLLNDVAEVLHQIAMLQLVKSAEQEE 305 Query: 272 GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 + LA ++P +Q + +++L + + LR P Sbjct: 306 SAIHFLAKQMAPEDIQFFYQVILMGKKELPLAPE--QRSGVEMTFLR-ALAFHPK 357 >UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C6MGX6_9PROT Length = 537 Score = 357 bits (917), Expect = 3e-97, Method: Composition-based stats. Identities = 82/361 (22%), Positives = 131/361 (36%), Gaps = 39/361 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + + R HHA L+ G+G + L++ L C+ Sbjct: 10 KWRPRNFTELTGQEHVVRALTNALEQNRLHHAYLLTGTRGVGKTTIARILAKSLNCETGI 69 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + +G+ D L + VD +RE+ E G K+ + Sbjct: 70 TATPCGTCTTCVQIDSGSFIDLVEL---DAASNTQVDNMRELLENALYAPTCGRYKIYII 126 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPPA F LAT + +++ T+ SRC L P+ Sbjct: 127 DEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDQQKIPITVLSRCLQFNLKQIPQPQITD 186 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +L R + GS AL+L + E + + + Sbjct: 187 HLKKILAQEKIPCDILSLQLVARAAQGSMRDALSLLDQAIAFGAGKIEEASVRDMLGIID 246 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDA------LKRHHGAAQVTNVD 269 + LL AL + L + L D + Q D Sbjct: 247 HSYLFDLLDALTQKNGLKLLSLADEMEARCLSFDCALQDLAVILHRIALAQAIPQALGED 306 Query: 270 VPGLVA--ELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 +P + LA L+P +Q H R L T LLR+ ++ + Sbjct: 307 IPDYIRINALAKILAPDDIQLFYQIALHGRGDLSLAPDEYA--GFTMTLLRMLTFMPEDL 364 Query: 328 V 328 V Sbjct: 365 V 365 >UniRef50_UPI00016C46EC DNA polymerase III gamma and tau subunits n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46EC Length = 614 Score = 357 bits (917), Expect = 3e-97, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 129/360 (35%), Gaps = 44/360 (12%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P + LV + ++GR HA L G+G + L++ L C + Sbjct: 23 RYRPQQFSELIGQEHVAGALVNALKSGRVAHAYLFTGARGVGKTSAARILAKALNCLKTD 82 Query: 55 --GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 C C C+ + G D + G + V+ VR++ + + G K+ Sbjct: 83 KATPTPCDECDSCRAVMTGDDVDVLEI---DGASNNKVEEVRDLRQNVGFRPARGRYKIY 139 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ +A NALLKTLEEPP F LAT E +++ T+ SRC+ A Sbjct: 140 IIDEVHMLSTSAFNALLKTLEEPPEHVKFILATTEVQKIPITILSRCQRFDFAHVGPGKI 199 Query: 173 VTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYS 223 L DAL R +AGS + +L + TL A+ + Sbjct: 200 FEQLKRIVEREGHQADDDALRLVARRAAGSMRDSQSLLDQLLASSSGTLTAGQVTAVLGT 259 Query: 224 VPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQV------------------ 265 L A+ L +A + L+ QV Sbjct: 260 AGDDRVIELAKAILANDPKTALDRIAEWVERGLQIGELIDQVVEYWRALMLVSCGGPDVR 319 Query: 266 ---TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 + + + A +S + A L + + ++ + ++L+ ++R+ Sbjct: 320 ELPVSPNQHEAIRTQAKAVSLDTVLAGLEILTATKARMRGTPHV--QVLLEMAVVRLCRL 377 >UniRef50_A5EY35 DNA polymerase III, subunits gamma and tau n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EY35_DICNV Length = 665 Score = 357 bits (916), Expect = 4e-97, Method: Composition-based stats. Identities = 78/372 (20%), Positives = 132/372 (35%), Gaps = 46/372 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ-QP 53 +W P + + L + R HHA L G+G +L ++ L C Sbjct: 8 KWRPKTFRELVGQQHITQALSYALDHDRLHHAYLFTGTRGVGKTSLARIYAKSLNCLING 67 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + CG C C + G PD + + G+D +E+ + L G KV Sbjct: 68 TSAQPCGQCEHCLEIDQGRFPDLIEV---DAASRRGIDETKELLDNLPYAPVKGRYKVYL 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + + T + NALLKTLEEPP F LAT + +++ T+ SRC +L + Sbjct: 125 IDEVHMFTRESFNALLKTLEEPPPHVKFILATTDIQKVPTTVLSRCLQFHLKNINPEQLR 184 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 L+ + +AL+ + + GS L+ + L +V Sbjct: 185 QHLAHILQVERIDYEAEALVLLAQAARGSMRDGLSFLDQAIAYGQGVVKTDDVAYLLGAV 244 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATL------LMDALK------RHHGAAQVTNVDVPG 272 P+ Y LL + A A L L MD L+ + AQ+ P Sbjct: 245 PTAQIYRLLTKIAESDARAVRAILTELDAFSPDYMDVLRHVFQGLQQITVAQLQAQQNPN 304 Query: 273 LVAE----LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY------ 322 + + LA L +Q + + + + + + LR+ Sbjct: 305 EIDQTLVRLAQQLPVELVQLWYQIISDAWQSMPYQP--DMRVALEMTFLRMIALQPLLPE 362 Query: 323 --LQPGVVLPVP 332 + ++P P Sbjct: 363 TTISEKHIIPEP 374 >UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W8W3_ATOPD Length = 755 Score = 357 bits (916), Expect = 4e-97, Method: Composition-based stats. Identities = 82/372 (22%), Positives = 135/372 (36%), Gaps = 47/372 (12%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + HA L G G + L++ +LC + Sbjct: 7 KYRPQTFEQVVGQKHVVGTLKRAVLEQKLSHAYLFCGPRGTGKTTMARLLAKAILCHEAP 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 GH G C CQL+ AG HPD + + + GVD VRE + + + G KV Sbjct: 67 GHLPDGTCEDCQLIAAGQHPDVFEI---DAASNTGVDNVREEIISRASYAPVCGKGKVYI 123 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT AA NALLKTLEEPP+ F + T +P+++LAT+ SR + Sbjct: 124 IDEVHMLTSAAFNALLKTLEEPPSHVTFIMCTTDPQKILATILSRVQRFDFRSIAADEMA 183 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAY-- 222 L T A+ +R + G AL+ + E + + Sbjct: 184 EHLISVCKNEGFTYEDAAIDLIVRYARGGMRDALSSLEQLSVYGGGVISEQTVRDVLGQS 243 Query: 223 ----------SVPSGDWYSLLAALN-----HEQAPARLHWLATLLMDALKRH----HGAA 263 ++ D SL +N + LA + D A Sbjct: 244 SGSLINSAALALAQRDISSLFTTVNTLFEGGKDLLQFTRELAAHVRDLYVATAVGVDSPA 303 Query: 264 QVTNVDVPGLVAELANHL-SPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 + + + A S RL +L + Q+ T +N+ L++ ++ Sbjct: 304 LANSSASTEQLTKEAQAFGSVDRLSRVLTVLGDAANQMR--TAVNQRLVLEVTFTKLA-- 359 Query: 323 LQPGVVLPVPHL 334 +P L + L Sbjct: 360 -RPNTELSLEAL 370 >UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=B0VRL4_ACIBS Length = 682 Score = 357 bits (916), Expect = 5e-97, Method: Composition-based stats. Identities = 73/359 (20%), Positives = 127/359 (35%), Gaps = 41/359 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L ++ ++GR HHA L G+G + L++ L C+ Sbjct: 8 KYRPRNFNELVGQNHVSRALSSALESGRLHHAYLFTGTRGVGKTTIARILAKCLNCETGV 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + G D + + V+ RE+ + + G KV + Sbjct: 68 TSTPCEVCATCKAVNEGRFIDLIEI---DAASRTKVEDTRELLDNVPYAPTQGRFKVYLI 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F AT +P++L T+ SRC L P Sbjct: 125 DEVHMLSTHSFNALLKTLEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVDEITK 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ QDA+ + GS AL+L + + + Sbjct: 185 HLGAILEKEQIAADQDAIWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEMLGLID 244 Query: 226 SGDWYSLLAALNHE-----------------QAPARLHWLATLLMDALKRHH--GAAQVT 266 Y L+ A++ L L + L + + Sbjct: 245 RTIIYDLILAVHQNQREKVSQLLLQFRYQALDVSLVLDQLISTLHELALLQYLPELGLKY 304 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + ++ + +L+ +S LQ C R L + +E +LR+ +P Sbjct: 305 SEEINAKILQLSKLISAQDLQLYYQIACKGRSDLQLA--VTQEQGFEMCVLRLL-AFRP 360 >UniRef50_B1WS93 DNA polymerase III gamma and tau subunits n=6 Tax=Cyanobacteria RepID=B1WS93_CYAA5 Length = 683 Score = 356 bits (915), Expect = 5e-97, Method: Composition-based stats. Identities = 79/356 (22%), Positives = 123/356 (34%), Gaps = 43/356 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ--Q 52 ++ P D L + + R A L G G + L++ L C + Sbjct: 10 KYRPQTFADLVGQEAIATTLSNAIASQRIAPAYLFTGPRGTGKTSSARILAKSLNCLAVK 69 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + G+ D + + GVD +RE+ E+ KV Sbjct: 70 VPTASPCGQCEVCRAIARGSALDVIEI---DAASNTGVDNIREIIERSQFAPVQCRYKVY 126 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ AA NALLKTLEEPP F LAT +P+R+L T+ SRC+ P + Sbjct: 127 VIDECHMLSVAAFNALLKTLEEPPERVIFVLATTDPQRVLPTIISRCQRFDYRRIPLEAM 186 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAAL---ALFQGDNWQARETLCQALAYSV 224 V L + + +AL +++ G A + L +V Sbjct: 187 VEHLTIIAQKENIEIEAEALTLVAQIANGGLRDAESLLDQLSLLSGGITPEKVWDLVGAV 246 Query: 225 PSGDWYSLLAALNHEQAP-----------------ARLHWLATLLMDALKRHHGAAQVTN 267 P D SLL A+N L LA ++ L + Sbjct: 247 PERDLLSLLKAINSNNPELVIESCRKLMDRGREPLVVLQNLAAFYLNLLIAKTAPTRSDL 306 Query: 268 VDVP----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 V V + A + + QL + T L + LL + Sbjct: 307 VAVTSTTWDDLCTEAEQWQTETILRGQQKLKESEVQLKNTTQ--PRLWLEVTLLGL 360 >UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DT09_EIKCO Length = 754 Score = 356 bits (915), Expect = 5e-97, Method: Composition-based stats. Identities = 83/337 (24%), Positives = 129/337 (38%), Gaps = 37/337 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + GR HHA L+ G+G + L++ L C+ P Sbjct: 9 KWRPKTFADLVGQEHVVKALQNALGKGRLHHAYLLTGTRGVGKTTIARILAKSLNCETPH 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C+ C+ + AG D + + G+D +REV E G KV + Sbjct: 69 EGEPCGQCQSCRDIDAGRFVDLLEI---DAASNTGIDNIREVLENAQYAPTAGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPP F LAT +P ++ T+ SRC L Q Sbjct: 126 DEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTAQQVSQ 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ ++ AL R +AGS AL+L + E + + +V Sbjct: 186 HLAHVLTSEQIPYEAPALALLGRAAAGSMRDALSLLDQAIAMGSGSVTEADVRQMIGAVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDAL-----------------KRHHGAAQVTNV 268 YSLL A ++ L + A+ A V Sbjct: 246 QHYLYSLLQAAANQDGAVLLATAQEMAGRAIGFDSALSELALLLQKLALIKTIPAAVPAD 305 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 D + +LA L ++Q V H ++ L Sbjct: 306 DPERDTLQQLAGQLGDEQIQLYYQCVIHGKQDLPLAP 342 >UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJR0_9GAMM Length = 587 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 86/362 (23%), Positives = 128/362 (35%), Gaps = 42/362 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G + L+R L C+ Sbjct: 9 KWRPGRFEDLVGQPHVVRALANALSGDRLHHAYLFAGTRGVGKTTIARILARCLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG CR C + G H D + + VD RE+ + ++ G KV + Sbjct: 69 TATPCGECRSCVEIAEGRHLDLIEV---DAASRTRVDDTRELLDNVSYAPTAGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L++ + NALLKTLEEPP F LAT +P++L T+ SRC L P P Sbjct: 126 DEVHMLSEKSFNALLKTLEEPPDHVKFLLATTDPQKLPVTVLSRCLQFNLKPMPPALIAE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ----ALAYSVP 225 L + + ALL + GS AL+L + L + + +P Sbjct: 186 HLTRILEAEGLQAEPGALLRLGEAAEGSMRDALSLTDQAIAYGGDRLTESDACDMLGLLP 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL---------LMDALKRH----------HGAAQVT 266 LL A P + L L L+D L G Sbjct: 246 RTRLTGLLDAAFAGDGPGLMQGLQELKGLGPDWSRLLDELAALVHRVAVEQLVRGEGGAE 305 Query: 267 NVDVPGLV-AELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + D E A + LQ + H L + ++ + LLR+ +P Sbjct: 306 DDDAAERWARETAARIDAETLQLTYQILIHGARDLPWAP--DAQMGVEMTLLRLL-AFRP 362 Query: 326 GV 327 Sbjct: 363 EG 364 >UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y576_9FIRM Length = 613 Score = 356 bits (914), Expect = 7e-97, Method: Composition-based stats. Identities = 79/365 (21%), Positives = 142/365 (38%), Gaps = 40/365 (10%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 + P + L + + + HA L G G + L++ + C+ Q Sbjct: 9 TYRPSSFEEVVGQQHIVTTLKNAVKQNKIAHAYLFCGPRGTGKTTIAKLLAKAVNCEDQQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C CR C +Q G HPD + + GVD VRE+ EK+ G KV + Sbjct: 69 NA-PCNQCRSCLAIQQGNHPDIVEI---DAASNNGVDEVRELIEKVKYAPLEGRYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +++ A NALLKTLEEPP+ F LAT EP+++L T+ SRC+ + + + +T Sbjct: 125 DEVHMMSSGAFNALLKTLEEPPSHVIFILATTEPQKVLPTIISRCQRYDFSKVGQNEIIT 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 + + +AL +L+ G AL++ + Sbjct: 185 RVRCVLEQEHIECEDEALRLVAQLADGGMRDALSIMDQCIAYAQNHITAAHVNEIYGITT 244 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-------------LMDALKRHHGAAQVTNVDVPG 272 + +L + QA + L + L L++ LK +V + Sbjct: 245 VSEKIEMLQWIFQHQAQSLLEKIRLLNEKGVDIKRLTSDLIEILKECVIFIYTQDVTLLN 304 Query: 273 LVAE-LANHL----SPSRLQAILGDVCHIREQLMSVTGIN--RELLITDLLLRIEHYLQP 325 + E AN + S L A++ + E+ + + E+ + ++ ++ + Sbjct: 305 KINETEANAIINGKSSRDLLALIDILMETLEKYRTASSAASYFEVAVLKMMAELDQSRRT 364 Query: 326 GVVLP 330 V+P Sbjct: 365 AAVIP 369 >UniRef50_UPI0001C37DC8 DNA polymerase III subunits gamma and tau n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37DC8 Length = 539 Score = 355 bits (913), Expect = 9e-97, Method: Composition-based stats. Identities = 68/360 (18%), Positives = 125/360 (34%), Gaps = 42/360 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L +G+ HA L G G L++ + C+ + Sbjct: 8 KWRPMTFDDVISQQQTTDTLKNQIMSGKTAHAYLFTGSRGTGKTTCARILAKAVNCRNMK 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ +G D + + GVD +R++ + G K+ + Sbjct: 68 DGNPCLECDICRDADSGALTDIVEI---DAASNNGVDNIRDLRDAAVYTPDRGQYKIYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLK +EEPP F LAT E ++ AT+ SRC+ + Sbjct: 125 DEVHMLSAGAFNALLKIMEEPPPYVKFILATTEIHKVPATILSRCQRFDFRRIKPEDIAA 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG---DNWQARETLCQALAYSVPS 226 L E+T++ +L+ G A++L + E + A A Sbjct: 185 RLKYIAEQEELTLTDGGAAMIAKLADGGMRDAVSLLDRCSVGGEEIDEDVVSAAAGIAGR 244 Query: 227 GDWYSLLAALNHEQAPARL-----------------HWLATLLMDALKRHHGAAQ----- 264 + LL A+N L L + L + + Sbjct: 245 DYLFGLLEAINTGDTAKALSITASLYDMSKDIGRLCEELISQLRNIMLIKVSPDTAESLI 304 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 V + + ELA+ + + + + + +NR + L+++ ++ Sbjct: 305 VCVAEEMQKLRELADSTELDTIMSHISILQECSSNMNRA--MNRRVEFEMALIKLCGNIR 362 >UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS6_UNCTG Length = 531 Score = 355 bits (913), Expect = 9e-97, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 120/354 (33%), Gaps = 39/354 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + L S R HA L G G + L++ L C+ Sbjct: 9 KFRPQNFDEVVGQEHISQTLKNSISEKRIAHAYLFSGPRGCGKTTMARILAKALNCKNGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C + + D + G + G+D +R + E + K+ + Sbjct: 69 TIKPCGVCENCVEISKSSSVDVLEI---DGASNNGIDDIRVLRENVKFSTASSKYKIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +T A NALLKTLEEPPA F +AT E ++ T+ SRC+ + V Sbjct: 126 DEAHQITAQAFNALLKTLEEPPAHVIFIMATTEQHKIPITILSRCQRYRFKLISGAEMVC 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 + + +AL S GS AL+L + + L +P Sbjct: 186 AIKSIGQEEGFEIDDEALNIVTSASGGSMRDALSLLDQAVSSNTGRITGDYMRGLLGLLP 245 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAA-QVTN 267 S+ + A L L L + + A + Sbjct: 246 KDIIVSVTDNIAKGDIHAILKIVKEIYEQGYNILQFARDLREHLRNVMIYSINPAIAEIS 305 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 + + + + SR + + E++ +L+ LL++ Sbjct: 306 SEDKKIFDVQKSLFTVSRYVRMNNLLSKALEEMRWHDQ--PRILLEMYLLKMSE 357 >UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A8S0_CARHZ Length = 511 Score = 355 bits (913), Expect = 9e-97, Method: Composition-based stats. Identities = 67/363 (18%), Positives = 126/363 (34%), Gaps = 38/363 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + + HA L G G L++ + C+ P Sbjct: 8 KWRPKTFSEIVGQETIVKILKNAVATMQVAHAYLFSGPRGTGKTTTAKVLAKAVNCEHPV 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C + + + + + + G+D +RE+ E + G KV + Sbjct: 68 EGEPCNQCPSCIGINNQSLLNVFEI---DAASNRGIDEIRELRESIKLVPAQGKYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NALLKTLEEPP F LAT E ++ T+ SRC+ + Sbjct: 125 DEVHMLTNEAFNALLKTLEEPPEHVIFILATTEFNKVPVTIVSRCQRFDFKRISTKTIWE 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQA---LAYSVPS 226 L ++ +AL S G AL+L + + + V Sbjct: 185 HLKNIAEKEKLQYEAEALHLIAEASEGGLRDALSLMDQILVFNPKITVEDTLKVLGFVSW 244 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTN------------------V 268 L++A+ ++ +A ++ L Q+ Sbjct: 245 RKILELISAIRENNQLKIINEIAEVVERGLDVKLFVQQILQYVRYLNLIKNGIEVEELMP 304 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 +V + A +L + D+ + ++ + + LL++ L+ ++ Sbjct: 305 EVLEKLRSEAALWEEDKLFLLWDDIARLEREVRYASF--PRIWAEVGLLKVARNLEGKLL 362 Query: 329 LPV 331 P Sbjct: 363 KPA 365 >UniRef50_Q47XQ9 DNA polymerase III, gamma/tau subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47XQ9_COLP3 Length = 715 Score = 355 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 128/352 (36%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L G+G + ++ L C+ Sbjct: 9 KWRPKNFQQLMGQEHVVNVLANALSQKRLHHAYLFTGTRGVGKTTIARIFAKSLNCELGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C + G D + + VD RE+ + + G KV + Sbjct: 69 TDKPCGKCDACIDIDQGRFVDLLEI---DAASKTKVDDTREILDNVQYAPSRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFILATTDPQKLPITVLSRCLQFHLKALTVKQIED 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQ----GDNWQARETLCQALAYSVP 225 L+ +V+ Q L + + GS +L+L T Q + + Sbjct: 186 KLAEILSHEQVSHEQGCLTLLAKAARGSMRDSLSLTDQAIAQGQGHINLTNIQQMLGGID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLAT----------LLMDALKRHHGAAQVTNVDVP---- 271 Y L+ L + + A + L + ++ H A + V+ P Sbjct: 246 QNWVYQLVITLLKQDSQALMTLSQEIASYAPSYSRLFAELIQLFHQIALMQIVEQPFDLP 305 Query: 272 ----GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 L+ + + +S +Q + R+ L + + LLR+ Sbjct: 306 ADLLALLKKFSQAMSAEDVQLYYQISLNGRKDLPYAF--DEQAAFDMTLLRL 355 >UniRef50_B9CMB1 DNA polymerase III subunit gamma/tau n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CMB1_9ACTN Length = 723 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 84/372 (22%), Positives = 133/372 (35%), Gaps = 47/372 (12%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + G+ HA L G G + L++ LLC++ Sbjct: 7 KYRPQTFEQVVGQKHVVGTLKRAVLEGKVSHAYLFCGPRGTGKTTMARLLAKALLCRKAP 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 G G C CQL+ AG HPD + + GVD VRE + + N G KV Sbjct: 67 GQLPDGTCEECQLIAAGNHPDVVEI---DAASNTGVDNVREEIISRANYAPVRGKGKVYI 123 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT AA NALLKTLEEPPA F L T +P+++L T+ SR + + + Sbjct: 124 IDEVHMLTTAAFNALLKTLEEPPAHVTFILCTTDPQKVLGTVLSRVQRFDFHAIGNEEML 183 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 + L AL +R + G AL + + + Q Sbjct: 184 SHLQQVCEAESFQYDARALELIVRHARGGMRDALTSLEQLSVFGDGVVSLAIAQDFLGEA 243 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLL---MDALKRHHG------------------AA 263 + A+ + TL+ D L+ +A Sbjct: 244 SGSLLAHVSTAIAKRDVSTLFEQVNTLVDEGRDVLQFTRELAAHIRNAYVMAAVGPDTSA 303 Query: 264 QVTNVDVPGLVAELANHL-SPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 D +A+ S RL L + Q+ + + N+ L++ R+ Sbjct: 304 LTITDDERTQLAQEVREYRSADRLARALTILGDASNQMRTAS--NQRLVLEIAFTRLA-- 359 Query: 323 LQPGVVLPVPHL 334 +P L + L Sbjct: 360 -RPTSDLTLESL 370 >UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=Peptococcaceae RepID=A5D6B1_PELTS Length = 558 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 74/367 (20%), Positives = 124/367 (33%), Gaps = 43/367 (11%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P L + +AGR HA + G G L++ L C +G Sbjct: 10 WRPRTFGEIIGQEHITRTLKNAVEAGRVGHAYIFCGARGTGKTTAAKVLAKALNCTGREG 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G D + + G+D +R++ EK+ G +V + Sbjct: 70 AEPCNRCESCRAVNEGISVDVIEI---DAASNRGIDEIRDLREKIRFAPAAGRYRVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP LAT EP R+ T+ SRC+ + Sbjct: 127 EVHMLTSEAFNALLKTLEEPPRHAVLILATTEPHRVPLTILSRCQRFDFRRIIPADIIKR 186 Query: 176 LSR-----EVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPS 226 L + + ++AL R + G AL++ + E + +V + Sbjct: 187 LKEVAAGARLEVEEEALRLIARAAEGGLRDALSILDQAAAFGGMKVTEAGVHQILGTVRT 246 Query: 227 GDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTNVD 269 + L +A L LA L L Sbjct: 247 DALDRMAGCLAAGEAGRALRLVSELAGEGKDLRLFARELAGYLRALLLEKISPGTPAGEA 306 Query: 270 V--PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 +A A S + L + + + + +++ L++ +P Sbjct: 307 WGDTARMAAQAAEFSEAGLVRAVEIIARAEQDMKWSA--MPGIVLELALVK---ACRPEA 361 Query: 328 VLPVPHL 334 +P L Sbjct: 362 GWDLPSL 368 >UniRef50_B1ZQU6 DNA polymerase III, subunits gamma and tau n=3 Tax=Verrucomicrobia RepID=B1ZQU6_OPITP Length = 395 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 73/353 (20%), Positives = 128/353 (36%), Gaps = 31/353 (8%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HA L G G + ++ L C Sbjct: 12 KWRPQTFDDVVGQDHVVRTLKNAIARNRIAHAYLFVGPRGTGKTSTARIFAKALNCTDGP 71 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C+ + G+H D + G + GVD VR++ + + G KV + Sbjct: 72 KADFDPNDPACKAIAEGSHLDVIEI---DGASNNGVDQVRDLRDTVQYAPAQGRYKVYII 128 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPP F AT +P+++L T+ SRC+ L P P + Sbjct: 129 DEVHMLSAAAFNALLKTLEEPPGHVKFVFATTDPQKVLPTIISRCQRFDLKPIPPDLIIA 188 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++T+S AL R++ G A ++ E + V Sbjct: 189 RLKQIAASEKITISAAALECIARMADGGMRDAQSILDQMISFCGTDISEADVLDVYGLVS 248 Query: 226 SGDW---YSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANH-- 280 + LAA +H + A + T D ++ + +A+ Sbjct: 249 AEKIAELAGALAAGDHRKIVAIVDDCDTNGRDLVRLLSDLQAFVRAALLDAIAQGGRSAK 308 Query: 281 -----LSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 ++ +L +L + + G+ ++ LL+ + + Sbjct: 309 LGGEPMTTEQLTRMLDALREGEGAVKL--GLAEKINFEVTLLKAVDASRSRAI 359 >UniRef50_A3ZPF5 DNA polymerase III gamma and tau subunits n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZPF5_9PLAN Length = 618 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 123/358 (34%), Gaps = 42/358 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P + + L + + GR HA L G+G + L++ L CQ+ Sbjct: 24 RYRPQSFEELVGQSQVAQALKNAIERGRVGHAYLFTGARGVGKTSSARILAKALNCQRGP 83 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + G D + G + G++ +R++ +N K+ + Sbjct: 84 SATPCNECDICRSVTVGEDVDVLEI---DGASNRGIEEIRQLRSNVNIRPSRARFKIYII 140 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + + T A NALLKTLEEPP F T +PE++ T+ SRC+ VT Sbjct: 141 DEVHMFTKEAFNALLKTLEEPPEHVKFIFCTTDPEKIPITVLSRCQRFDFGGIRMDEIVT 200 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ VT +AL R + GS + +L + + + + Sbjct: 201 RLAYIVENEGVTAEPEALRLLARKANGSMRDSQSLLEQLLAFGGREITVADVNQMLGAAG 260 Query: 226 SGDWYSLL----------------AALNHE-QAPARLHWLATLLMDALKRHHGAA----Q 264 S ++ AL + L D + GA Q Sbjct: 261 SEQIAVIMTALAARDAAAVLAYFDQALTRGIDPGQLIEQLLGFFRDMMTLAVGAGPTLLQ 320 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 + +A + + A + + ++ + +L L+R+ Sbjct: 321 TVLPTDAEKIEAVAKSYGLANVMAAVQILDDALVRMQRSA--HARILAEMALVRVCQL 376 >UniRef50_B9L692 DNA polymerase III, subunits gamma and tau n=1 Tax=Nautilia profundicola AmH RepID=B9L692_NAUPA Length = 493 Score = 354 bits (909), Expect = 2e-96, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 124/346 (35%), Gaps = 36/346 (10%) Query: 1 MRWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P + LV S R HA L L G G ++ L C Sbjct: 5 LKYRPKRFEEIIGQDAIVKTLVNSLDKNRIAHAYLFSGLRGAGKTTTARIFAKALQCDHG 64 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 C C C + H D + + ++ +RE+ E +G K+ Sbjct: 65 PTSNPCEECENCIMANESRHIDIIEM---DAASNRKIEDIRELIEHTKYKPSVGKYKIFI 121 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT+ A NALLKTLEEPP F +AT +P +L AT+ SR + Sbjct: 122 IDEVHMLTNEAFNALLKTLEEPPEYVKFIMATTDPLKLPATILSRVQHFRFNKIKNGIIE 181 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGD 228 +L V ++AL ++ + GS +L L ++ + Sbjct: 182 NYLIKILAIENVEFDEEALRLIIKAAKGSVRDSLTLLDQAIAFSK--------GKIDLDS 233 Query: 229 WYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE---------LAN 279 +L +N E + D + ++ + D+ ++ E Sbjct: 234 VVDMLGVINPEIINEIFDAVKN--SDKKRIKEIVGEIKDYDIESIIDEVIIYLKDALFEG 291 Query: 280 HLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 L +Q V ++E + + E ++T + LR+ ++P Sbjct: 292 SLPLITVQRFFNIVADVKELIKY--NTDNEFVLTLMFLRMSEAVKP 335 >UniRef50_A6T0H3 DNA polymerase III gamma and tau subunit n=3 Tax=Betaproteobacteria RepID=A6T0H3_JANMA Length = 673 Score = 353 bits (908), Expect = 3e-96, Method: Composition-based stats. Identities = 85/364 (23%), Positives = 127/364 (34%), Gaps = 45/364 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + R HHA L G+G L L++ C P Sbjct: 9 KYRPKSFDTLVGQEHVVRALTHALDNQRLHHAYLFTGTRGVGKTTLSRILAKSFNCVGPD 68 Query: 55 G-----HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 G CG C C + AG DY + + GVD + ++ E+ Sbjct: 69 GNGGITSTPCGVCEACVAIDAGRFVDYIEM---DAASNRGVDEMAQLLEQAVYAPSNARF 125 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 KV + + +LT+ A N++LKTLEEPP F LAT +P+++ T+ SRC L P Sbjct: 126 KVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP 185 Query: 170 QYAVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQAL 220 + V+ L + AL + + GS AL+L + Q + Sbjct: 186 GHIVSHLDNILGQENIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLDAVQGM 245 Query: 221 AYSVPSGDWYSLLAALNHEQAP-----------------ARLHWLATLLMDALKRHHGAA 263 ++ LL AL + A L L TLL A Sbjct: 246 LGALDQSFLIRLLDALAEKDGAGLLAVADEMATRSLSYNAALQDLCTLLHRVALAQTVPA 305 Query: 264 QV-TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 V ++ V LA +Q H R +L + LLR+ Sbjct: 306 AVPEDLPEYADVMRLAGLFDAEEIQLFYQIAVHGRNELGLAPDEYA--GFSMTLLRML-A 362 Query: 323 LQPG 326 +PG Sbjct: 363 FRPG 366 >UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacillales RepID=C2H810_ENTFC Length = 581 Score = 353 bits (908), Expect = 4e-96, Method: Composition-based stats. Identities = 69/363 (19%), Positives = 123/363 (33%), Gaps = 40/363 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W D + L + + + HA L G G + ++ + C + Sbjct: 10 WRSQRFEDIVGQKAVTQTLKNAIVSHKTSHAYLFTGPRGTGKTSAAKIFAKAINCPNSKD 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + AGT D + + GV+ +R + ++ N KV + Sbjct: 70 GEPCNECEMCRSITAGTQEDVIEI---DAASNNGVEEIRFIRDRANYAPTKAAYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +L+ A NALLKTLEEP F LAT EP ++ AT+ SR + V Sbjct: 127 EVHMLSTGAFNALLKTLEEPKESVIFILATTEPHKIPATIISRTQRFDFKRINTADIVEH 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVPS 226 L + AL R + G AL++ + S+ Sbjct: 187 LEFILKESTINYEPAALNVIARSAEGGMRDALSILDQAISFSEGTITLDDAMQVTGSLTD 246 Query: 227 GDWYSLLAALNHEQAPARLHWLATLL-----------------MDALKRHHGAAQV--TN 267 S L+A ++ P L L +L D L V + Sbjct: 247 EMMDSYLSACVKKEVPEALEALNQILAAGKESRRFLEDMLQYCRDLLMYQQAPNLVEEQS 306 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + ELA +S +L +++ + + ++ + + + +++ V Sbjct: 307 STIRSTFTELAQTVSADQLFSMIKILSDTQNEIRFTN--SAAIYLEVATVKLAQLPSASV 364 Query: 328 VLP 330 Sbjct: 365 PSA 367 >UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ4_9FIRM Length = 593 Score = 353 bits (906), Expect = 6e-96, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 129/352 (36%), Gaps = 40/352 (11%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 + P + + L + + + HA L G G ++ ++ + C+ + Sbjct: 15 TYRPNSFDEVAGQKHIVKTLQNAVEQNKIAHAYLFCGPRGTGKTSIAKIFAKVINCESKE 74 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 HK C C C +Q G+HPD + + GV+ VR + EK+ G KV + Sbjct: 75 -HKPCLQCDNCLAVQNGSHPDIIEI---DAASNNGVEEVRNLIEKVKYAPLKGKYKVYII 130 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +++ A NALLKT+EEPP F LAT EP ++L T+ SRC+ P+ V+ Sbjct: 131 DEVHMMSAGAFNALLKTIEEPPEHVIFILATTEPHKVLPTIISRCQRFDFTKVPKNEIVS 190 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 + + D + +L+ G AL++ A + + Sbjct: 191 RIHTILEKEHIECDDDVIELIAQLADGGLRDALSILDQCIAYATNHIELQHINEIYGITT 250 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLL----------MDALKRHHGAAQVTNVDVPGLVA 275 + L + + + + L +L +D ++ + L+ Sbjct: 251 VQEKMKLFHHIFNNEPVDLMDMLDGMLEKGLDIPRLTVDLIELLKESIIFEYTKDSSLLH 310 Query: 276 ELANHLSPSRL--------QAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 L+N + + ++ + E+ + + LL + Sbjct: 311 SLSNEQAVEFITSKSLKARFEMIHLLMDTYEKYRFASNVGS--YFEVCLLEM 360 >UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZU40_DESOH Length = 570 Score = 353 bits (906), Expect = 6e-96, Method: Composition-based stats. Identities = 75/368 (20%), Positives = 127/368 (34%), Gaps = 41/368 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + +GR HA+L G G + L++ + C++ Sbjct: 9 KYRPQTFEEVVEQQQVTRTLTNAIASGRVAHAILFTGPRGTGKTTIARILAKAMNCEKGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C CR C + +G D + + G + VD VRE+ + K+ + Sbjct: 69 TPTPCCACRSCLEIASGNATDVFEI---DGASNNSVDQVRELRGNVKFMPAHSPYKIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPPA FF AT EP ++ T+ SRC+ H L+ V Sbjct: 126 DEVHMLSGPAFNALLKTLEEPPAHVMFFFATTEPHKIPVTILSRCQRHDLSFVGIDPLVA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + + +L + GS +L+L + + Sbjct: 186 HLETLCEKENIPIEKKSLELIAHEAGGSVRDSLSLLDQVMSSAQGPVSHEMVLEALGIID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWL-----------------ATLLMDALKRHHGAAQVTNV 268 + L A+ L L D L G Sbjct: 246 REVIFGLSGAVLAGDMTGALDILDTVYRGGHDIKRFYAEMLGHFRDLLMVKLGVRAERLA 305 Query: 269 DVPGLVAE--LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 +PG E A + L + E+ ++ + + +++ L Sbjct: 306 SLPGWAVEKMQAQTRDVTELFLSQAMALMLAEEDRVRFSSQPKIAVEMVFVKL---LHTK 362 Query: 327 VVLPVPHL 334 VLP+ L Sbjct: 363 PVLPIDTL 370 >UniRef50_A0L8F3 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8F3_MAGSM Length = 605 Score = 353 bits (906), Expect = 7e-96, Method: Composition-based stats. Identities = 89/368 (24%), Positives = 133/368 (36%), Gaps = 46/368 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + + GR HA L + G+G L L+ L C Sbjct: 13 KWRPRRFEDLIGQEHTVQALRHALEQGRIPHAFLFTGIRGIGKTTLSRLLAMCLNCGTGV 72 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G HPD + + + V+ +RE+ + + L K+ + Sbjct: 73 TANPCGACDSCRAIVRGEHPDVFEV---DAASRTKVEQMRELLDGVAYTPSLSRYKIYIL 129 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NALLKTLEEPP F AT E ++L T+ SRC+ + L Sbjct: 130 DEVHMLSASSFNALLKTLEEPPTHVKFIFATTEVRKILPTILSRCQRYDLRRLDRDGLAR 189 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 +L+ ++ Q+ L A + GS AL+L + T L Sbjct: 190 YLAHVLDVEQIAYDQEGLAAISHAADGSVRDALSLLDQAIAHGGGRVDYTHVSGLLGLTD 249 Query: 226 SGDWYSLLAALNHEQAPARLHWLAT----------LLMDALKRHHGAAQVTNVDVPGLVA 275 +L A L + L A LL D L H + V V Sbjct: 250 RQAVVALFADLCRGRLLEMLERAAYFHRDGVEPVVLLNDLLDITHQVTRELAVGVGDAAQ 309 Query: 276 ELANH---------LSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPG 326 L+ H L LQ + + RE L + LLLR H Sbjct: 310 ALSEHEGLKEVWPKLGLEHLQMLYQVLLRGREDLQMARL--PRQALEMLLLRAAHL---- 363 Query: 327 VVLPVPHL 334 PVP L Sbjct: 364 --RPVPPL 369 >UniRef50_C6BXI6 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXI6_DESAD Length = 638 Score = 352 bits (905), Expect = 8e-96, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 124/360 (34%), Gaps = 43/360 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + A L G+G + ++ L C+ Sbjct: 9 KYRPQTFGEVAGQEAVKTILSRAAAQDKVAPAYLFSGTRGVGKTTIARIFAKALNCKNAP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ + AG D + + VD R + E + KV + Sbjct: 69 TAEPCNECDNCRQITAGVGVDVVEI---DAASHGKVDDARRLKEDIGYAPIEFRYKVFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT A NALLKTLEEPP F +AT E + AT+ SRC+ + + Sbjct: 126 DEAHMLTVQAFNALLKTLEEPPPHATFIMATTETHKFPATIISRCQHYAFKMLTNDELIA 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 LS ++ Q A+ + AGS +++L + + E +++ Sbjct: 186 HLSNILNMEQIEFEQGAVDLIAKRGAGSVRDSMSLLGQVLALGSEKLLEEDVRSILGLAG 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTN------------------ 267 +++L+ A++ A + +L L ++ N Sbjct: 246 RDVFFTLMQAIHGRDLVAVGDTVQQVLGRGLDLGFFIRELGNCWRNMFLLNQSGERAVPL 305 Query: 268 ----VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 + + A S + A + ++M T + + + LLL + Sbjct: 306 LGLSSEEAAEFMKWAQTFDRSFIHACWQMTVDGQRKVM--TSLEPAMALELLLLNMASLT 363 >UniRef50_B0MPA0 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPA0_9FIRM Length = 743 Score = 352 bits (904), Expect = 9e-96, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 122/342 (35%), Gaps = 35/342 (10%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 L +AG HA L G G +++ + C P CG C C+ Sbjct: 20 QEHITTTLKNQIKAGTPAHAYLFTGSRGTGKTTCAKLMAKAVNCLSPVDGNPCGECESCK 79 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + AG PD + + GVD VR + +++ + KV + + +L+ A N Sbjct: 80 AIAAGC-PDIIEM---DAASNNGVDDVRALRDEVMYAPTVCRYKVYIIDEVHMLSSQAFN 135 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVT 181 ALLKT+EEPP F LAT E ++ AT+ SRC+ + + + L V Sbjct: 136 ALLKTIEEPPPHVIFILATTEIHKVPATIASRCQQFRFSRIDVEESTKRLCEIAKKENVN 195 Query: 182 MSQDALLAALRLSAGSPGAALALFQGD---NWQARETLCQALAYSVPSGDWYSLLAALNH 238 +++DA RLS G A++L + E + A + ++L ++ Sbjct: 196 ITEDAARLISRLSDGGMRDAVSLLDQCISVSADIDEETVRTTAGIAGTEHLFTLAQCIHE 255 Query: 239 EQAPARLHWLATL-----------------LMDALKRHHGAAQVTNVD----VPGLVAEL 277 + AP L L L + + + + +A Sbjct: 256 QNAPEALKILDELHNQSKDLMLLLDELLSHFRNLCILSATNSDFSLIPAGSGTRNDLARQ 315 Query: 278 ANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + + + + + R+ + L+R+ Sbjct: 316 TKEFTLGEIMRCMDILQDCIA--RTPKTAKRKTVAEMCLIRL 355 >UniRef50_C9RAG1 DNA polymerase III, subunits gamma and tau n=1 Tax=Ammonifex degensii KC4 RepID=C9RAG1_AMMDK Length = 427 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 80/334 (23%), Positives = 122/334 (36%), Gaps = 22/334 (6%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P L + GR HA L G G + L++ L C Q Sbjct: 11 WRPQQFAQVVGQAHVTRTLRNALAMGRIAHAYLFAGPRGTGKTSTARILAKALNCLQGPT 70 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 C C C + GT D + + G+D +RE+ E++ KV + Sbjct: 71 PVPCDTCPQCLSIMEGTSLDVLEI---DAASRRGIDEMRELRERVRLSPVHSRYKVYIID 127 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 +A +LT AANALLKTLEEPP + F LAT EP ++ T+ SRC+ P Sbjct: 128 EAHMLTSEAANALLKTLEEPPPQVVFILATTEPHKIPVTILSRCQRFDFRRLPTALIEEH 187 Query: 176 LSRE-----VTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPS 226 L+R V + ++AL + + GS AL+L + R L VPS Sbjct: 188 LARVAETFPVKVEREALRLLAQAAEGSMRDALSLLDQALAWAEGELRAIDVADLLGKVPS 247 Query: 227 GDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAEL-ANHLSPSR 285 +L L L + + + + ++ L +PS Sbjct: 248 QALEEMLTYLQKGDLAGALRLVNEIEERGKDLNLFVRDLILRLREEILRHLREERKAPSW 307 Query: 286 LQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 L L + + + L + L+R+ Sbjct: 308 LLRSLAALHQALVDMRLSPL--KSLTLELALIRL 339 >UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Microscilla marina ATCC 23134 RepID=A2A0B1_9SPHI Length = 575 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 135/360 (37%), Gaps = 45/360 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + ++ + A L G+G L++ + C P Sbjct: 10 KYRPATFDTVVGQSHITTTLKNAIKSNQLAQAFLFCGPRGVGKTTCARILAKTINCLTPT 69 Query: 55 GH-KSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 ++CG C C Q + Y L ++ VD +R + +++ + G KV Sbjct: 70 EDFEACGTCESCVSFQNQGSMNVYEL---DAASSNSVDDIRNLVDQVRYPPQSGKRKVYI 126 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+++A NA LKTLEEPP F LAT E +++ T+ SRC++ + Sbjct: 127 IDEVHMLSNSAFNAFLKTLEEPPEYVIFILATTEKHKIIPTILSRCQIFDFKRIEVKDMS 186 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQ------GDNWQARETLCQALAY 222 L E+ QDAL + + G AL+LF D +++ + L + Sbjct: 187 GHLANIAQKEEIEAEQDALDLIAQKADGGLRDALSLFDLITTFSADRHITYQSVVKNL-H 245 Query: 223 SVPSGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKRHHGAA-- 263 + ++ + AL + P L + + L + + A Sbjct: 246 ILDHDYYFKITDALLAQDMPLVLLYFDEILRKGFDGHIFIAGLGAHLRNVMMCKDPATVK 305 Query: 264 -QVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 + V AE A + S S L + L L + N + +L+++ + Sbjct: 306 LLEVSEKVKQRFAEQAQNASASFLLSALNLANDC--DLHYKSSKNPRFFVELVLMKMANL 363 >UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKL9_9BACT Length = 534 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 78/338 (23%), Positives = 120/338 (35%), Gaps = 38/338 (11%) Query: 2 RWYPWLRP-------DFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 + P L S + GR HA L G+G + L++ + C +P Sbjct: 9 KLRPQNFDELSGQEFVVTTLKNSIEMGRVAHAYLFTGPRGVGKTSAARILAKAVNCLEPV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G C C C + +GT D + G + G+D +RE+ E + KV + Sbjct: 69 GSNPCNKCENCTEITSGTSMDVVEI---DGASNRGIDEIRELREAVRFLPVKCKFKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT+ A NALLKTLEEPP F LAT +P+RL AT+ SRC+ + P + Sbjct: 126 DEVHMLTEHAFNALLKTLEEPPDYVMFILATTDPQRLPATIISRCQKYDFNKIPFEIMYD 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ + +DAL +R S G +L+L + E L Sbjct: 186 SLAGAMDTEGIEYDKDALNLVVRNSDGCMRDSLSLLDQIIAFTGGKLDEQSTSFLLGFSE 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALK--RHHGAAQVT 266 L A + EQ + L + L + Sbjct: 246 KSLVDKLFALIIKEQPEEIPDAIEELSGKGVNFAFATETLIGHTRNLLMQLITKKENKEL 305 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 EL + S +L A+ + L + Sbjct: 306 TSKENDYYKELVKNTSEQQLYALFQVFQKLLNDLKFFS 343 >UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Betaproteobacteria RepID=Q3SLE5_THIDA Length = 581 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 84/336 (25%), Positives = 118/336 (35%), Gaps = 36/336 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + GR HHA L+ G+G L L++ L C+ Sbjct: 18 KWRPRAFADLRGQEHVVQALSNALTQGRLHHAYLLTGTRGVGKTTLARILAKCLNCESGV 77 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + AG D L + GVD +REV + +G KV + Sbjct: 78 SATPCGTCSACTQIDAGRFVDLLEL---DAASNTGVDNMREVLDNAQYAPTVGRYKVYII 134 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A N++LKTLEEPPA F LAT +P+++ T+ SRC L P Sbjct: 135 DEVHMLSKPAFNSMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKPMTPALVAG 194 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L V AL R +AGS AL+L + +A+ +V Sbjct: 195 HLGDVLAQERVDAEPAALNLLARAAAGSMRDALSLTDQAIAYGGGRIEAAAVEAMLGTVR 254 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNV 268 + LL AL A L L LL H V + Sbjct: 255 RDYLFDLLDALAAGDGDALMTQARLLAERGIAFDATLQDLGNLLTQLALVLHAPGAVEDG 314 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 A L +Q + R L Sbjct: 315 ADAERTRAAAEKLDAETVQLYYQIALNGRRDLPYAP 350 >UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URG8_AKKM8 Length = 732 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 68/366 (18%), Positives = 132/366 (36%), Gaps = 41/366 (11%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + R HA L G G + ++ L C Sbjct: 9 KYRPLTFDDVLGQDHVVRTLKNAIEHNRLAHAYLFVGPRGTGKTSTARIFAKALNCSGGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 H C+ + G D + G + G+D +R++ + + G ++V++ Sbjct: 69 KVDFDPHEDICEEIAEGRSLDVLEI---DGASNRGIDHIRDLRDNVRFAPSRGNFRIVYI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT + NALLKTLEEPP F AT EP ++L T+ SRC+ L P P + Sbjct: 126 DEVHMLTKESFNALLKTLEEPPPHVKFIFATTEPHKILPTILSRCQRFDLRPIPSEIIAE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDN----------------WQAR 213 L + V++S++A A +++ G A ++ Sbjct: 186 HLLHIASAEGVSLSREAAFAVAKVADGGMRDAQSMLDQLVSFCGDHIEEQQVLHIFGITS 245 Query: 214 ETLCQALAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHHGAAQVTNV 268 + + + SLL L+ + L + + + + L + Sbjct: 246 RETVAHALALILNKELPSLLHLLHEQAEAGRDMSQFLSEIISAVREILVSKVDPEASFDS 305 Query: 269 D---VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 +AEL ++ ++ + +++ T N+ L + L++ H L Sbjct: 306 LPESSKEELAELVKRTHTDKILRLVEVLAETEDKMRWST--NKRLHLEMGLIKAVHTLAE 363 Query: 326 GVVLPV 331 + + Sbjct: 364 ASISDI 369 >UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 Tax=Gammaproteobacteria RepID=A1AWB5_RUTMC Length = 529 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 74/346 (21%), Positives = 124/346 (35%), Gaps = 33/346 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L+ + A HH L G+G + L++ + C+Q Sbjct: 11 KYRPHSFVKLVGQTHTKKTLINALDANNLHHGFLFTGTRGVGKTTIARILAKSINCEQGI 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K C C C + G D L + GVD +R++ E K+ + Sbjct: 71 SSKPCDKCATCVEIDKGQSIDLIEL---DAASHTGVDNMRDILENAQYMPSKNRYKIYLI 127 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F L T +P++L T+ SRC L + Sbjct: 128 DEVHMLSKNSFNALLKTLEEPPEHVKFLLVTTDPQKLPVTVLSRCLQFTLQQLTHDEILE 187 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ + AL GS AL+L +A+ V Sbjct: 188 QLKFIMNAEVLSYEESALGQIADFGNGSMRDALSLLDQSISYGKGTVTNADIKAMLGLVH 247 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDA--LKRHHGAAQVTNVDVPGL 273 D L L + A A + ++ L L D L +Q+ N + Sbjct: 248 HDDIIKLTTHLFSQDAKAVIDFIKDLSRRGENLSNALKDLSSLFHKISISQIVNTESNKT 307 Query: 274 VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + L+ +S LQ + + + + ++ LLR+ Sbjct: 308 IQNLSTQISNFDLQIFYQMSINGSKDMALAP--SEQIGFEMTLLRM 351 >UniRef50_Q609A7 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q609A7_METCA Length = 547 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 83/366 (22%), Positives = 129/366 (35%), Gaps = 39/366 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + +AGR HHA L G+G L L++ L C+ Q Sbjct: 9 KWRPHNFTEVVGQEHVVKALTHALEAGRMHHAYLFTGTRGVGKTTLARILAKALNCEDRQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G CG C C+ + G D + + V+ R++ + + G KV + Sbjct: 69 GANPCGRCLICREVDEGRFIDLIEV---DAASRTKVEDTRDLLDNVQYAPNQGRYKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P+++ T+ SRC L + Sbjct: 126 DEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKIPVTVLSRCLQFNLKRLTPEQIRA 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 ++ + A A R + GS L+L + T A+ +V Sbjct: 186 QMAQILASESIDFEPAATKALARAAQGSMRDGLSLLDQAIAHCGGRLTNTGVSAMLGTVS 245 Query: 226 SGDWYSLLAALNHEQAPARL-----------------HWLATLLMDALKRHHGAAQVTNV 268 Y L AL +A L L +L + Sbjct: 246 REPVYGALEALAESRADELLAVSATLAEFSPDYQDVVQQLLAILHQIAIAQFAPDAIRQD 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 D V LA L+P Q ++ L + LLLR+ +P Sbjct: 306 DEAERVLTLARCLTPEDTQLYYQIALQGQKDLQLAP--DPRDGFEMLLLRML-AFRPHSA 362 Query: 329 LPVPHL 334 P + Sbjct: 363 EAAPRI 368 >UniRef50_B5EJD9 DNA polymerase III, subunits gamma and tau n=3 Tax=Acidithiobacillus RepID=B5EJD9_ACIF5 Length = 572 Score = 350 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 82/350 (23%), Positives = 119/350 (34%), Gaps = 39/350 (11%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 RW P D L + +GR HHA L G+G L L++ L C++ Sbjct: 10 RWRPQHFDDFVGQEAVVSALRHALDSGRIHHAFLFTGTRGVGKTTLARLLAKCLNCERGV 69 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + AG D + + VD R++ + + G K + Sbjct: 70 SSNPCGECSACRSIAAGNFVDLLEV---DAASRTRVDETRDLLDNVQYAPTAGRYKAYLI 126 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC L Sbjct: 127 DEVHMLSAHSFNALLKTLEEPPEHVKFLLATTDPQKLPITVLSRCLQFNLRRLDVPQIQG 186 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +V AL R + GS AL+L R A+ Sbjct: 187 RLRQIMSLEQVPAEDAALQILSRAADGSLRDALSLLDQAIVHGGGAVRRDGVLAMLGRSG 246 Query: 226 SGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHGAAQVTNV 268 L+AAL A L + L A + Sbjct: 247 DDAVLGLIAALVDRDAAQVFAIVGDHLARGMDGPGLLDLVIEGLHRIALAQFLPAD-PDD 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 D V L +SP LQ+ + R + + + LR Sbjct: 306 DGAEAVVHLRGRISPLTLQSWYFLLLSARRDFALYP--DDRMALEMAFLR 353 >UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQ74_ACIBL Length = 632 Score = 350 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 81/372 (21%), Positives = 130/372 (34%), Gaps = 47/372 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P L + + R H + G+G + L+ L CQ Sbjct: 9 KYRPQKFSEVIGQDHVTRTLKNAIEQQRIAHGYIFSGHRGIGKTTIARILAMALNCQSAD 68 Query: 54 -QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 + CG C C+ ++AG D + G+D +RE+ E K+ Sbjct: 69 HPVSEPCGVCDSCKEVKAGQSVDVIEI---DAATNRGIDEIRELREAARYRPARDRFKIY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + +A +TDAA NALLKTLEEPP F +AT EPE + T+RSRC+ Sbjct: 126 ILDEAHQITDAAFNALLKTLEEPPGHIVFMMATTEPEDIPQTIRSRCQHFSFHAVKFDDI 185 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYS 223 V L + DAL GS AL++ Q + + L + Sbjct: 186 VLQLRDIAGKEGIGAEDDALAMLAEAGDGSMRDALSIMDQAIAACGNQLKTDDVRGLMGT 245 Query: 224 VPSGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKR----HHGA 262 V S ++ ++ + + L + L L +A+ A Sbjct: 246 VSSDVLEDIMNGVHANSSESVLTTIDKLLIEGHSPLHFAKQAVRFLRNAMVAKVAGKDSA 305 Query: 263 AQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 + D VA +A S L L + L + + LL++ Sbjct: 306 LLQISSDERERVARVAEQFSEEDLARFLQIMLRTHSDLGYKQE--QRFHLELGLLKL--- 360 Query: 323 LQPGVVLPVPHL 334 + +LP+ L Sbjct: 361 VHAQRMLPLEEL 372 >UniRef50_C7H4D6 DNA polymerase III, gamma/tau subunit n=3 Tax=Ruminococcaceae RepID=C7H4D6_9FIRM Length = 625 Score = 350 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 70/367 (19%), Positives = 125/367 (34%), Gaps = 41/367 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L GR HA L + G G ++ + C PQ Sbjct: 15 KWRPQRFEDVVAQRGIVTALRNQIATGRVGHAYLFTGVRGTGKTTCAKIFAKAVNCLHPQ 74 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ + G+ D + + GVD +R++ ++ KV + Sbjct: 75 NGDPCGECEICRGIDNGSILDVVEM---DAASNNGVDDIRDLRDETAYTPSACHYKVYII 131 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPPA F LAT E +++ AT+ SRC+ + + Sbjct: 132 DEVHMLSTAAFNALLKTLEEPPAHVIFILATTEIQKVPATILSRCQRYDFTRIGPEDIAQ 191 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNW---QARETLCQALAYSVPS 226 + + +S + RL+ G+ AL++ + + + +A Sbjct: 192 RVEYIAGQEGLELSGEGAELISRLADGAMRDALSILDTCAGVTAKIDADVVRRMAGVTDR 251 Query: 227 GDWYSLLAALNHE-----------------QAPARLHWLATLLMDALKRHHGAAQV---- 265 + + AL + L + Q Sbjct: 252 SYLFRISDALEAQDAAAALAQLAQLRQQSVDVKRLTEELIAHYRALMLAALPGGQALLSG 311 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 + + L E + + + + E + + ++ + + L + Q Sbjct: 312 VSPEEEKLYLEKGPRMGQREAIRAIRALGNALEHMTRGS--DQRIELELALFSLSEPPQQ 369 Query: 326 GVVLPVP 332 V VP Sbjct: 370 VAVQAVP 376 >UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z526_9NEIS Length = 657 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 94/369 (25%), Positives = 139/369 (37%), Gaps = 42/369 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + R HHA L+ G+G + L++ L C+ Sbjct: 30 KWRPKRFADLVGQEHVVRALTNALAGERLHHAYLLTGTRGVGKTTIARILAKSLNCEAGV 89 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G + CG C C+ + AG D + + G+D +REV E G KV + Sbjct: 90 GAEPCGECSACRQIDAGRFVDLLEI---DAASNTGIDNIREVLENAQYAPTSGRYKVYII 146 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NA+LKTLEEPPA F LAT +P+++ T+ SRC L Q Sbjct: 147 DEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFSLRNMTPQQVAG 206 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ +V+ AL R +AGS AL+L + E +A+ +V Sbjct: 207 HLARVLDVEQVSYEAPALALLGRAAAGSMRDALSLLDQAIAYGVGKVEEGGVRAMLGAVD 266 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDAL-----------------KRHHGAAQVTNV 268 Y+LL AL P + L + A +T Sbjct: 267 RAYLYTLLEALAEADGPRLIAEAKALAERGVGFDSALGELALLLQQIALAQTVPAAITGD 326 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI---EHYLQ 324 D V LA ++P +Q H R+ L + T LLR+ Sbjct: 327 DPDAEAVLALAQLIAPEDVQLYYQIAIHGRKDLALAPDEHA--GFTMTLLRMLAFHPLNA 384 Query: 325 PGVVLPVPH 333 PG P P Sbjct: 385 PGDSTPTPR 393 >UniRef50_D1VUH2 DNA polymerase III, gamma and tau subunit n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUH2_9FIRM Length = 577 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 119/355 (33%), Gaps = 40/355 (11%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + HA L G G + +R + C+ P Sbjct: 8 KYRPLDFNQMIGQEALVMSLKNQIKNNEVSHAYLFSGTRGTGKTSAAKIFARAVNCEHPI 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C+ C + T D + + GVD +R++ +K+ KV + Sbjct: 68 DGNPCNKCKSCLSILNNTSVDVVEM---DAASNNGVDDIRDLKDKVIYPPTFLKYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLK LEEPP+ F LAT E E++ AT+ SR + + + + Sbjct: 125 DEVHMLSKGAFNALLKILEEPPSHLIFILATTEKEKIPATILSRTQKFEFSRVSLENIIK 184 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L T+ + + S G+ AL++ D+ + Sbjct: 185 RLKYISQMEGKTLDDEVYQLIAKTSDGAMRDALSVLDQLLSFDSDHISIEKAMDVLGISS 244 Query: 226 SGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRH--HGAAQVT 266 S + L +A ++ A + L + D + + Sbjct: 245 SESLFELTSAYLNKDAARAISVIDDIAIQGKDFLSLNNQLLKHMRDLMLVRTLKNPENLV 304 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 E A + I+ ++ ++ L N +L+ ++I + Sbjct: 305 YSTYLKDFKEQAATCDLDNILDIIDELKDLQVNLKYAE--NPRILLEMTSIKICN 357 >UniRef50_A6LDQ5 DNA polymerase III subunit gamma/tau n=19 Tax=Bacteroidales RepID=A6LDQ5_PARD8 Length = 586 Score = 350 bits (898), Expect = 5e-95, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 121/345 (35%), Gaps = 42/345 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + Q+ + HA L G+G + ++ + C P Sbjct: 10 KYRPSTFRSVVGQKSLTTTLKNAIQSNKLAHAYLFCGPRGVGKTSCARIFAKTINCLNPT 69 Query: 55 -GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 ++C C C+ + + L + VD +R + +++ +G KV Sbjct: 70 ADGEACNACESCRAFNEQRSYNIHEL---DAASNNSVDDIRTLIDQVRIPPPIGKYKVFI 126 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT AA NA LKTLEEPP F LAT E ++L T+ SRC+++ + V Sbjct: 127 IDEVHMLTTAAFNAFLKTLEEPPHHALFILATTEKHKVLPTILSRCQIYDFSRISIADMV 186 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQA---- 219 L VT +AL + + G AL++F + + + Sbjct: 187 EHLQYVSSQEGVTAEPEALNVIAQKADGGMRDALSIFDQVVSFTNGNITYQAVIDNLNVL 246 Query: 220 -------LAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHHGAAQVTN 267 L ++ SG+ + L LN + LA D L + V Sbjct: 247 DYEYYFRLTDAILSGNVRASLLILNEILGKGFDGQNIITGLAGHFRDLLVCRDESTLVLF 306 Query: 268 ---VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRE 309 + E+A H L + L N+ Sbjct: 307 EVGASIRERYKEMAKHCPDQLLFKAIELANTC--DLNYRASRNKR 349 >UniRef50_A6DLE8 DNA polymerase III, gamma and tau subunits n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLE8_9BACT Length = 890 Score = 350 bits (898), Expect = 5e-95, Method: Composition-based stats. Identities = 81/359 (22%), Positives = 128/359 (35%), Gaps = 46/359 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D L + + R HA + G+G ++ L C+ P+ Sbjct: 9 KWRPQTFDDLAGQDHITSTLTNAIRNQRVGHAYIFVGTRGIGKTTSARIFAKALNCETPR 68 Query: 55 GH-KSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 CG C C + G+ D + G + VD +R++ E K+ Sbjct: 69 ADLNPCGQCTNCTEITQGSSIDVIEI---DGASNNSVDDIRQIREGAQYTPARCPYKIFI 125 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L++AA NALLKTLEEPP F AT E R+L T+ SRC+ L P P Sbjct: 126 IDEVHMLSNAAWNALLKTLEEPPPHIKFLFATTEVHRVLPTILSRCQRLELKPIPRNVIA 185 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG------DNWQARETLCQALAY 222 L V + A+ A R + G L++ N E + Sbjct: 186 GRLKHICETENVAIEDSAINAISRTANGGMRDGLSILDQMISFCSGNEIISEQDVIDVFG 245 Query: 223 SVPSGDWYSLLAALNHEQAPARLH-----------------WLATLLMDALKRHHGAAQV 265 S + + +A+ QAPA + L L D + Q Sbjct: 246 MSSSNELKLIASAILQNQAPALIEAIDTLAKAARNMEQLYSELFQLFRDVMILLESPQQA 305 Query: 266 TNVD-----VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 ++ + ELA + LQ +L ++ +N+ + LLRI Sbjct: 306 RSILDLEEVEIQQLYELAQLANNKLLQKLLNGFLDYDGKIR--HTLNKRTYLEVTLLRI 362 >UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfitobacterium hafniense RepID=B8FY14_DESHD Length = 554 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 78/365 (21%), Positives = 127/365 (34%), Gaps = 38/365 (10%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P D + L + + HA L G G L++ L C+ +G Sbjct: 10 WRPKNFKDMVGQDHVTKTLTNALMQSKVAHAYLFSGPRGTGKTTTAKVLAKALNCEHREG 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C + G+ + + + + G+D +R++ +K+ A KV + Sbjct: 70 VEPCNQCAFCLSIDQGSAMEVFEI---DAASNRGIDEIRDLRDKVRLSAGESKYKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKTLEEPP F LAT E ++ T+ SR + P + + Sbjct: 127 EVHMLTTEAFNALLKTLEEPPERVVFILATTEVHKIPLTILSRVQRFEFHRIPLEQIHSH 186 Query: 176 LSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNWQ---------------ARET 215 L + + +AL + S G AL++ E Sbjct: 187 LDKVCQTIGRDVEPEALQIIAQKSEGGLRDALSILDQCLLLDGKLGVEQVYQVLGMVGEE 246 Query: 216 LCQALAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHHGAA-QVTNVD 269 L + +GD+ L L + L + AL A Sbjct: 247 FSAQLVDHLLTGDYAKALGCLGEGINQGMDPRQIIRELLDYMRQALLYASTQAFPQVAPH 306 Query: 270 VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVL 329 + +A L L +G + QL N L LL+++ + QPG Sbjct: 307 LREHLAYQCQKLGLKTLLQWIGILLQGESQLKYAA--NARLAAELLLVQVIYDSQPGYSK 364 Query: 330 PVPHL 334 P + Sbjct: 365 ESPQV 369 >UniRef50_Q0B0W5 DNA-directed DNA polymerase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0W5_SYNWW Length = 499 Score = 349 bits (897), Expect = 7e-95, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 129/362 (35%), Gaps = 43/362 (11%) Query: 3 WYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P L + + G+ HA L G G ++ +++ + C+ Sbjct: 10 WRPRRFAEVVGQEKTVTALRNAVREGKLSHAYLFSGPRGTGKTSIAKIIAKAVNCENLSE 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C CQ + G D + + G+D +R++ EK+ G KV + Sbjct: 70 GEPCNQCSSCQDINNGNFMDVIEI---DAASNRGIDEIRDLREKVRVLPAQGKNKVYIID 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NALLKT+EEPP F LAT E ++ AT+RSRC+++ Sbjct: 127 EVHMLTTEAFNALLKTIEEPPDAVIFILATTESHKIPATIRSRCQVYNFRRLTTAEITER 186 Query: 176 LS-----REVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQALAYSVP 225 LS + + +ALL R + G AL++ N + + V Sbjct: 187 LSDVAANDGIILEPEALLLLARRANGGMRDALSMLDQIYSYKGNNSISKQDVLEVMGLVD 246 Query: 226 SGDWYSLLAALNHEQAPARLHWL-----------------ATLLMDALKR----HHGAAQ 264 L+AA+ + P+ + L + L D L Sbjct: 247 DAFMAQLIAAVLSQDTPSIIGILGTAFSQGKEAQQLAREASMFLRDFLLYLVAGKEADLV 306 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 V + + + ++ L L + ++L G ++ L+ + I Sbjct: 307 VAGEESQAFFEQQKSQINMQNLLRALRIMMDTADKLRFSEG--QKYLLEIAFMEIATLFS 364 Query: 325 PG 326 Sbjct: 365 EE 366 >UniRef50_A1WTL4 DNA polymerase III, subunits gamma and tau n=6 Tax=Gammaproteobacteria RepID=A1WTL4_HALHL Length = 554 Score = 348 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 80/363 (22%), Positives = 126/363 (34%), Gaps = 40/363 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + GR HHA L G+G + L++ L C+ Sbjct: 9 KWRPRRFEDVAGQEHVLRALANALADGRLHHAYLFSGTRGVGKTTVARILAKCLNCEHGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + AG D + + V+ RE+ + + G K+ + Sbjct: 69 TAEPCGTCDSCRELDAGRFVDLIEV---DAASRTKVEDTRELLDNVQYAPTRGRFKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L Sbjct: 126 DEVHMLSSHSFNALLKTLEEPPDHVKFLLATTDPQKLPVTVLSRCLQFHLRRLSSTLIRD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L VT+ A R + GS AL+L AR+ A+ ++ Sbjct: 186 RLLALAEEEGVTVDAGAAARLARAADGSLRDALSLLDQALAFGEGAARDDEVAAMLGAIE 245 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQVTNV 268 +L AL A L L + + + + Sbjct: 246 RRHVLEVLTALADGDGAALVTAARHMAEVAADFDEALAELVATVHSLALAQQVPSAIGDD 305 Query: 269 D-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + + LA + LQ + R L + LLR+ H +P Sbjct: 306 EPERDRLLALAERIDAEDLQLYYQIGVNARRDLPYAP--DPATGFEMALLRM-HAFRPAE 362 Query: 328 VLP 330 P Sbjct: 363 GAP 365 >UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragment) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CH16_9PLAN Length = 484 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 126/355 (35%), Gaps = 42/355 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P + + L + + R HA L G+G ++ L++ L C Q Sbjct: 14 RFRPQNFSEVVGQGMVAQALQNAIRGDRVAHAYLFTGARGVGKTSMARILAKALNCPHTQ 73 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C CQ + G+ D + G + G+D +R + +N + K+ + Sbjct: 74 DGIPCGECEVCQNIAVGSDVDVLEI---DGASNRGIDDIRSLRANVNVRSMRSKYKIYII 130 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F T EP +L T+ SRC+ E Sbjct: 131 DEVHMLTKEAFNALLKTLEEPPPNVKFIFCTTEPNKLPDTILSRCQRFDFGYIEENSICD 190 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L +V+++ DA+ R + GS + ++F + + Sbjct: 191 RLKQIAEAEQVSVADDAIQLVARRAGGSMRDSQSIFDQLLSFGESHLTAESVHRILGTAS 250 Query: 226 SGDWYSLLAALNHE-----------------QAPARLHWLATLLMDALKRHHGAAQV--- 265 L+ AL + Q + L L D GA+QV Sbjct: 251 DERLIELIDALIEQKRDVALTHFDAALNAGVQLNEFVDQLLNYLRDLSVVATGASQVTLL 310 Query: 266 -TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + + A A + R ++ + + L+ L+R+ Sbjct: 311 SISEMNRASLQRQAEAWGIQTCLAAFQILNEARNRMFRAS--HGRALVELALIRM 363 >UniRef50_C4LG88 DNA polymerase III, gamma and tau subunit n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LG88_CORK4 Length = 990 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 78/360 (21%), Positives = 122/360 (33%), Gaps = 47/360 (13%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D L + AGR +HA L G G + L+R L C Sbjct: 6 KYRPATFADVVGQEHVTVPLSRALDAGRINHAYLFSGPRGCGKTSSARILARSLNCVHGP 65 Query: 55 GHKSCGHCRGCQLMQAGT--HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + G D L + GV+ +R++ ++ +V Sbjct: 66 TSTPCGECESCRALAPGGPGSLDVTEL---DAASHRGVEDMRDLRDRAIYAPAESRYRVF 122 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + +A ++T NALLK +EEPP F AT EPE++L T++SR + Sbjct: 123 IIDEAHMITKEGFNALLKIVEEPPEHLVFIFATTEPEKVLTTIKSRTHQYPFRLLAPNDM 182 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARE------------- 214 L +V + +R GSP +L++ A E Sbjct: 183 RGLLERICSEEKVQVEDSVYPLVIRAGGGSPRDSLSVLDQLLAGADENGITYAHAAGVLG 242 Query: 215 ----TLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQV 265 L A SV + D L +N+ L D L Sbjct: 243 ITDSALIDAAVESVANNDPAGLFTTINNVLDAGHDPRRFATDLVDRFRDLLVLQSIPDAF 302 Query: 266 ------TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 +D +A+ A L P+ L V +L T + LL+ + R+ Sbjct: 303 DQGLVDAPLDQRETLADEAQSLGPATLTRCAAVVSDGLNELKGAT--SPRLLLEIMCARM 360 >UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7S3_COPPD Length = 522 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 101/267 (37%), Gaps = 20/267 (7%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + E L + + HA L G G + ++ L C+ Sbjct: 6 KYRPQTFEEVVGQSHVTEILTKALDNQKISHAYLFAGPKGSGKTSCARIFAKGLNCETGI 65 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K C C C+L+ G D + + GVD +RE+ E++ KV + Sbjct: 66 TSKPCNECESCKLINEGHSLDVIEI---DAASNRGVDEIRELRERVKYRPAQSRYKVYII 122 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT A NALLKTLEEPP F LAT +P+++ T+ SRC+ Sbjct: 123 DEAHMLTREAFNALLKTLEEPPEYVVFILATTDPQKIPPTVLSRCQRFRFKKLTSDEVFQ 182 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + ++AL +S G+ AL L + D + + L V Sbjct: 183 ILENVCKSEGFSYQREALELIAEVSDGAVRDALNLLEQISVVDEGKVSIKTARFLLNVVE 242 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLL 252 LL + LA L+ Sbjct: 243 DEVILDLLKTAFA-DMDEAVERLAELM 268 >UniRef50_A9HZ16 DNA polymerase III subunit Tau n=6 Tax=Bordetella RepID=A9HZ16_BORPD Length = 736 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 123/352 (34%), Gaps = 39/352 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + + R HHA L G+G L L++ L C+ Sbjct: 36 KWRPRSFDTLVGQDHVVRALTHALDSQRLHHAWLFTGTRGVGKTTLSRILAKSLNCETGI 95 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG CR C + AG DY L + GV+ + ++ E+ G KV + Sbjct: 96 TSKPCGQCRACTEIDAGRFVDYLEL---DAASNRGVEEMTQLLEQAVYAPGAGRYKVYMI 152 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NA+LKTLEEPP F LAT +P+++ T+ SRC L P V Sbjct: 153 DEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPPDAIVG 212 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L V AL + + GS AL+L E + + ++ Sbjct: 213 HLQAVLGDEAVACELPALRLIAQAAGGSMRDALSLTDQAIAYSAGNLTEDAVRGMLGTID 272 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDALKRHHGAAQVTNV------- 268 LL AL A L L L D A V Sbjct: 273 QRHLVRLLEALPAGDATGVLAVADELSTRGLSYAGALADLAVLLSRVAIEQRVPGATPAD 332 Query: 269 -DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + ++ LA L P +Q H R +L LR+ Sbjct: 333 DPLAADISRLAGVLHPDAVQLFYSVAVHSRGELSLAPDEYA--GFVMACLRM 382 >UniRef50_A5FRM9 DNA polymerase III, subunits gamma and tau n=5 Tax=Dehalococcoides RepID=A5FRM9_DEHSB Length = 570 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 123/347 (35%), Gaps = 39/347 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P L + +GR A L G G + L++ + C Q Sbjct: 12 KWRPQTLADLVGQEHVAHTLKNALSSGRIAQAYLFCGPRGTGKTSTGRILAKAVNCTTNQ 71 Query: 55 G-HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 G + C C C + G+ D + + GVD +RE+ EK+ L KV Sbjct: 72 GKGEPCNTCPMCLSITEGSSMDIIEI---DAASNTGVDDIRELKEKVQYSPSLANYKVYI 128 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+++A+NALLKTLEEPP F LAT E ++L T+ SRC+ Sbjct: 129 IDEVHMLSNSASNALLKTLEEPPPRVIFILATTEIHKVLPTIMSRCQRFDFHRVSLVDMT 188 Query: 174 TW-----LSREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSV 224 L+ + + +AL R + GS L Q + + QA Sbjct: 189 RKLGKISLAEGINVEPEALKLIARSAGGSFRDGENLLQQIATTYGAEISLSQVQAALGIS 248 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTN----------------- 267 +L + + L L +L D L ++ + Sbjct: 249 GDERIKALAENILKKDIKNGLKTLNAVLADGLDLKQFRRELLDYLRQIMLVNSGSESSLE 308 Query: 268 --VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLI 312 D + +++ + + + + + + ++ EL + Sbjct: 309 LTADEKKALQKVSGITNLENITKAIKAFSQLDFSSDTASSLSFELAL 355 >UniRef50_A4E9Y5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9Y5_9ACTN Length = 825 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 80/382 (20%), Positives = 126/382 (32%), Gaps = 57/382 (14%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + GR HA L G G + L++ LLC+ + Sbjct: 7 KYRPLTFDSVVGQQHIVSTLEHAITEGRLSHAYLFCGPRGTGKTTMARILAKALLCRNAE 66 Query: 55 GHK--------SCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHAR 105 + G C C+L+ G HPD Y L + GVD VRE + +N Sbjct: 67 AARAEGASGCLPDGACEECELIAEGNHPDVYEL---DAASRTGVDNVREEIINSVNFAPV 123 Query: 106 LGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLA 165 G K+ + + +LT AA NALLKTLEEPPA F L T +P+++L T+ SRC+ Sbjct: 124 RGKYKIYIIDEVHMLTTAAFNALLKTLEEPPAHVIFVLCTTDPQKILETILSRCQRFDFH 183 Query: 166 PPPEQYAVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETL 216 + L +AL R + G AL+ + N Sbjct: 184 RIGNEDIEHRLSYVCEQEGFDYDDEALAIVARHAKGGMRDALSTLEQLSVFGNGSVHADD 243 Query: 217 CQALAYSVPSGDWYSLLAALNHEQAPARLHW----------LATLLMDALKRHHGAAQVT 266 ++L V A+ L L D + Sbjct: 244 ARSLLGEVSDQILGEFSRAIADRDVAELYGLIRAQVEEGNDLLELTRDLVAHVRDVYVAC 303 Query: 267 NVDVPGLVAE--------------LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLI 312 + E RL +L + ++ + + L++ Sbjct: 304 VAGARAELFEGGSEQAEALAAEAAAFGEHPADRLARVLTVLDDAALEMRGASDV--RLVL 361 Query: 313 TDLLLRIEHYLQPGVVLPVPHL 334 R+ +P L + L Sbjct: 362 EIACTRLA---RPEADLTIEAL 380 >UniRef50_B1L8C0 DNA polymerase III, subunits gamma and tau n=6 Tax=Thermotogaceae RepID=B1L8C0_THESQ Length = 478 Score = 347 bits (891), Expect = 3e-94, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 119/321 (37%), Gaps = 28/321 (8%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + ++ + Q H + G G L L++ L C+ + Sbjct: 7 KYRPKTFSEVVDQDHVKKAIIGAIQKNSVAHGYIFAGPRGTGKTTLARILAKSLNCENRK 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G + C CR C+ + GT D L + G+D +R + + + G KV + Sbjct: 67 GVEPCNSCRACREIDEGTFMDVIEL---DAASNRGIDEIRRIRDAVGYRPMEGKYKVYII 123 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP+ F LAT E++ T+ SRC++ P++ Sbjct: 124 DEVHMLTKEAFNALLKTLEEPPSHVVFVLATTNLEKVPPTIISRCQVFEFRNIPDELIEK 183 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + ++AL + ++G AL + + + +P Sbjct: 184 RLQEVAEAEGIEIDREALSFIAKRASGGLRDALTMLEQVWKFSEGKIDLETVHRALGLIP 243 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELAN-----H 280 + A+ L D + V LV +L Sbjct: 244 IQVVRDYVNAIFSGDVKRVFTVLD----DVYYSGKDYEVLIQEAVEDLVEDLERERGVYQ 299 Query: 281 LSPSRLQAILGDVCHIREQLM 301 +S + + + + ++ ++ Sbjct: 300 VSANDIVQVSRQLLNLLREIK 320 >UniRef50_C7PSN6 DNA polymerase III, subunits gamma and tau n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSN6_CHIPD Length = 634 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 125/356 (35%), Gaps = 44/356 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-P 53 ++ P L + + + HA L G+G L++ + C+ Sbjct: 10 KYRPQNFSTVVGQSHITTTLKNAIRNSQLAHAFLFCGPRGVGKTTCARILAKTINCENLQ 69 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 ++C C C G+ + + L + VD +R + E++ + G K+ Sbjct: 70 PDGEACNQCHSCTSFNEGSSFNIHEL---DAASNNSVDDIRTLVEQVRFAPQAGKYKIYI 126 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ +A NA LKTLEEPP+ F LAT E ++L T+ SRC++ Q V Sbjct: 127 IDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRITIQDTV 186 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQALAYS 223 L + DAL + + G +L+ + + L Sbjct: 187 DHLQEICSKEHIQAETDALHLVAQKTDGCMRDSLSTLDKIVSFTGGHLTYQNTLEHLN-I 245 Query: 224 VPSGDWYSLLAALNHEQAPARLHWL-----------------ATLLMDALKRHHGAAQ-- 264 + ++ ++ + + L A L + L Sbjct: 246 LDYDYFFRVMDTVLQQDVATALLIFDEILQKGFEGDNFLNGWAEFLRNLLMSKEEKVLHL 305 Query: 265 -VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + ++ ++A +SPS L L + + N+ L + L+++ Sbjct: 306 VEVSGNLKDRYKQMAGKVSPSYLITALHLLNETE--INYRMARNKRLHVEMALIKL 359 >UniRef50_C7QXQ5 DNA polymerase III, subunits gamma and tau n=2 Tax=Cyanothece RepID=C7QXQ5_CYAP0 Length = 650 Score = 347 bits (890), Expect = 4e-94, Method: Composition-based stats. Identities = 78/356 (21%), Positives = 123/356 (34%), Gaps = 43/356 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ--Q 52 ++ P D L + A R A L G G + L++ L C Sbjct: 10 KYRPQTFADLVGQEAIATTLTNAIAAKRIAPAYLFTGPRGTGKTSSARILAKSLNCLAFS 69 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + G+ D + + GVD +RE+ E+ KV Sbjct: 70 DPTATPCGKCEVCRAIARGSALDVIEI---DAASNTGVDNIREIIERAQFAPVQCRYKVY 126 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ AA NALLKTLEEPP F LAT +P+R+L T+ SRC+ P Sbjct: 127 VIDECHMLSVAAFNALLKTLEEPPDRVIFVLATTDPQRVLPTIISRCQRFDYRRIPLDAM 186 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAAL---ALFQGDNWQARETLCQALAYSV 224 V L + ++QDAL+ +++ G A + L +V Sbjct: 187 VNHLSKIAQQETIDIAQDALILVAQIANGGLRDAESLLDQLSLLSGTITTDKVWELVGAV 246 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQ--- 264 P D LL A+ A + LA ++ L + Sbjct: 247 PEQDLLLLLQAIASNNAELVIDRCRHLMNRGREPLVVLQNLAGFYLNLLIAKTAPNRPDM 306 Query: 265 -VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + A+ + + + QL + T L + LL + Sbjct: 307 VAVTAPTWQALCNEAHQWNLETILQGQQRLKDSEFQLKNTTQ--PRLWLEVTLLSL 360 >UniRef50_B1XPA0 DNA-directed DNA polymerase III chain dnaX n=2 Tax=Cyanobacteria RepID=B1XPA0_SYNP2 Length = 742 Score = 347 bits (890), Expect = 4e-94, Method: Composition-based stats. Identities = 77/356 (21%), Positives = 127/356 (35%), Gaps = 43/356 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P L + + R A L G G + L++ L C Sbjct: 9 KYRPQTFAQLVGQEAIATTLSNALEQRRIAPAYLFSGPRGTGKTSSARILAKSLNCLNAA 68 Query: 54 -QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + G+ D + + GVD +RE+ E+ KV Sbjct: 69 QPTPHPCGECEVCRAIANGSALDVIEI---DAASNTGVDNIRELIERSQFAPVQCRYKVY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ AA NALLKTLEEPPA F LAT +P+R+L T+ SRC+ P Sbjct: 126 VIDECHMLSVAAFNALLKTLEEPPAHVVFVLATTDPQRVLPTIISRCQRFDYRRIPLDAM 185 Query: 173 VTWLS-----REVTMSQDALLAALRLSAGSPGAAL---ALFQGDNWQARETLCQALAYSV 224 V L + + +++ +++ G A + + L +V Sbjct: 186 VAHLRKIAHLENIDIPLESVTLIAQIANGGLRDAESLLDQLSLLSGEITPDKVWDLVGAV 245 Query: 225 PSGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHGAAQ--V 265 P D LL ++ A L LA+ ++ L + + Sbjct: 246 PERDLLQLLQVIHSNDPEAVIQQCRSLLNRGREPLVVLQNLASFYLNLLIAKTAPQRGDL 305 Query: 266 TNVDVP--GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 V P ++ + AN S + + QL + T L + LL + Sbjct: 306 IAVTQPTWEILCQEANQWELSTILQGQQHLKESEYQLKNTTQ--PRLWLEITLLGL 359 >UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 Tax=Brachyspira RepID=C0QV83_BRAHW Length = 527 Score = 347 bits (890), Expect = 4e-94, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 135/366 (36%), Gaps = 47/366 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + + S + HA L G+G +L +++ L C Sbjct: 11 KYRPQTFEEVIGQEHITKTISKSIAQKKIAHAYLFSGAHGVGKTSLARIIAKALNCVNGP 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 K CG C C ++ GT D + G + G++ +R + E + G KV + Sbjct: 71 TDKPCGVCPSCTQIENGTPLDVIEI---DGASNRGIENIRTIIENVRISPVAGKYKVYII 127 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +T+ A NALLKTLEEPPA F LAT E ER+L T+RSRC+ + + Sbjct: 128 DEVHQITNEAFNALLKTLEEPPAHVVFILATTEAERVLPTIRSRCQQYTFKSLGIEDLEK 187 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARET-------------- 215 L + ++A+ + + GS + + + + Sbjct: 188 ILKGILDKENIKYDEEAIFLIAKQARGSVRDSETILEKMIAYTTDKKYITSADVNAVVGG 247 Query: 216 ----LCQALAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHHGAAQVT 266 + + GD + ++ + + L G + Sbjct: 248 NNFSFVKGFFDIMIEGDKRKYFEFVKKLFEEAVDPRTFINSIIEYIRVVLMIKSGIDDIK 307 Query: 267 NVD----VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITD---LLLRI 319 ++ + ANH + ++ IL + + E++ S + N + LLL Sbjct: 308 LLEITENERDDLKTFANHYNDDEIERILDYILSVEERIRSAS--NTRTIFEMRMLLLLNT 365 Query: 320 EHYLQP 325 ++ ++P Sbjct: 366 DNLIRP 371 >UniRef50_Q5X1E1 DNA polymerase III, gamma and tau subunits n=6 Tax=Legionella RepID=Q5X1E1_LEGPA Length = 556 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 130/366 (35%), Gaps = 39/366 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L+ + R HHA L G+G ++ L++ L C++ Sbjct: 9 KWRPRTFSQLVGQEHINKALINALNQQRLHHAYLFTGTRGVGKTSVARILAKALNCEKGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C HC C ++ G + D + G + V+ R++ + + G K+ + Sbjct: 69 TSEPCLHCDTCVAIEQGRYIDLIEI---DGASKTRVEDTRDLLDNIQYAPTNGRFKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP+ F LAT +P++L T+ SRC L P + Sbjct: 126 DEVHMLSQHSFNALLKTLEEPPSHVKFILATTDPQKLPVTVLSRCLQFNLKHLPAELINQ 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L + AL + + GS AL+L L + L Sbjct: 186 QLQLILQEERLDFEIQALDILAQAARGSMRDALSLLDQAITSCETKLLASDVKILLGHTQ 245 Query: 226 SGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHGAAQVTNV 268 LL AL ++AP L + L + Sbjct: 246 QDYALLLLQALAKQEAPTMLVLSQQIIAEGGNFQYVLDEMLNYLHQITIYQCLGDNNPLI 305 Query: 269 DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 + ELA S Q RE++ + + +LR+ +P Sbjct: 306 SPKAEIKELAKQFSAEDTQLFYQIGIKGREEMHLAPTL--AIGFNMTMLRMYT-FKPASH 362 Query: 329 LPVPHL 334 + P L Sbjct: 363 VTTPPL 368 >UniRef50_B8F323 DNA polymerase III subunits gamma and tau n=4 Tax=Pasteurellaceae RepID=B8F323_HAEPS Length = 670 Score = 346 bits (889), Expect = 5e-94, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 129/357 (36%), Gaps = 36/357 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + GR HHA L G+G ++ ++ L C+ Sbjct: 9 KWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAKGLNCETGI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C+ ++ G D + + V+ RE+ + + +G KV + Sbjct: 69 SADPCGQCANCKAIEEGRFIDLIEI---DAASRTKVEDTRELLDNVQYKPTVGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT +P++L T+ SRC +L + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALEQSQIQQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARET----LCQALAYSVP 225 L ++ AL + + GS AL+L + + + + Sbjct: 186 HLEFILTQEQIPYELSALAKLAKAAQGSIRDALSLTDQAIAVSNVNITLPIVSQMLGLID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWL----------ATLLMDALKRHHGAAQVTNVDVPGL-- 273 L+ AL + + + L D + H A + + Sbjct: 246 DHQPLELVQALANADGEKAMAVIQSVAEKGVDWQQLFSDTAETLHQIAMLQLLKHAHQEE 305 Query: 274 --VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 + LA +SP +Q + +++L + + +LR P + Sbjct: 306 TPLHFLAKQISPEDVQFFYQVMLTGKKELPFAPE--QRSGVEMTILR-ALAFHPKNM 359 >UniRef50_B6J935 DNA polymerase III subunit gamma/tau n=6 Tax=Coxiella burnetii RepID=B6J935_COXB1 Length = 509 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 80/364 (21%), Positives = 126/364 (34%), Gaps = 38/364 (10%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P P L + HHA L G+G + L++ L C++ Sbjct: 9 KWRPRCFQEVIGQAPVVRALSNALDQQYLHHAYLFTGTRGVGKTTISRILAKCLNCEKGV 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + G PD + + + V+ RE+ + + G KV + Sbjct: 69 SANPCNDCENCREIDEGRFPDLFEV---DAASRTKVEDTRELLDNIPYAPTKGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP+ F LAT + +L T+ SRC +LA P Sbjct: 126 DEVHMLSGHSFNALLKTLEEPPSHVKFILATTDHHKLPVTVLSRCLQFHLAQLPPLQIAA 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 V AL R + GS AL+L N + + + ++ Sbjct: 186 HCQHLLKEENVEFENAALDLLARAANGSVRDALSLLDQSIAYGNGKVLIADVKTMLGTIE 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----------LMDALKRHHGAAQVTNVDVP---- 271 + +L AL + L + L L D L H A + V Sbjct: 246 PLLLFDILEALAAKAGDRLLGCVTRLVEQGVDFSNALADLLSLLHQIAIIQTVPEALIEN 305 Query: 272 --GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVL 329 + +LA L +Q + L + LLR+ P Sbjct: 306 DSEQLRQLAKLLDREDVQLFYQIGLIGQRDLAYSP--TPQTGFEMTLLRML-AFYPSAAN 362 Query: 330 PVPH 333 +P Sbjct: 363 AIPE 366 >UniRef50_B2GFF0 DNA polymerase III gamma/tau subunit n=52 Tax=cellular organisms RepID=B2GFF0_KOCRD Length = 1264 Score = 345 bits (887), Expect = 9e-94, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 123/360 (34%), Gaps = 47/360 (13%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P D E L+ + + R +HA L G G L+R L C + Sbjct: 8 RYRPETFEDVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARCLNCAEGP 67 Query: 55 GHKSCGHCRGCQLMQAGT--HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + D + + GVD R++ E+ K+ Sbjct: 68 TATPCGRCESCRDLARDGAGSLDVIEM---DAASHGGVDHARDLRERATFAPVRDRYKIF 124 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + +A ++T NALLK +EEPP F AT EP ++L T+RSR + P + Sbjct: 125 IIDEAHMVTREGFNALLKIVEEPPEHVKFIFATTEPSKVLTTIRSRTHHYPFRLVPPEPL 184 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG-----------------DNW 210 + +L V+ L +R GS +L++ Sbjct: 185 MRYLEQLCQEEGVSTEPGVLSLVVRAGGGSVRDSLSVLDQLMAGSDERGISYDLAVALLG 244 Query: 211 QARETLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQV 265 L + + +GD ++ ++++ + + L D + + Sbjct: 245 YTHAALLDDVVDAFAAGDAATVFSSVDRVVQTGQDPRRFVEDLLERFRDLVVVNAVPDSA 304 Query: 266 TNV------DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 N+ D + A L + L ++ T + +L + L RI Sbjct: 305 ANILHGMPTDQINRLRNQATQLGAAELSRSADITNEALNEMTGAT--SPQLHLELLCARI 362 >UniRef50_C7NGE4 DNA polymerase III, subunit gamma/tau n=2 Tax=Micrococcineae RepID=C7NGE4_KYTSD Length = 796 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 76/360 (21%), Positives = 128/360 (35%), Gaps = 47/360 (13%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P L + + GR +HA L G G L+R L C+Q Sbjct: 8 RYRPQNFSEVVGQEHVTGPLQQALRTGRVNHAYLFSGPRGCGKTTSARILARCLNCEQGP 67 Query: 55 GHKSCGHCRGCQLMQAGT--HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C CQ + G D + + GVD R++ EK + KV Sbjct: 68 TDSPCGECDSCQDLARGGAGSVDVIEI---DAASHGGVDDARDLREKASFGPAQSRYKVY 124 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + +A ++T A NALLK +EEPP F AT EPE+++ T+RSR + P Sbjct: 125 IIDEAHMVTSAGFNALLKIVEEPPEHVLFIFATTEPEKVIGTIRSRTHHYPFRLVPPAVL 184 Query: 173 VTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG-----------------DNW 210 +L+ +T+ L +R GS ++++ Sbjct: 185 QEYLAQVCEREGITVEPGVLSYVVRAGGGSVRDSMSVLDQLIAGSDDAGITLAGTTALLG 244 Query: 211 QARETLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQV 265 L + + +GD SL + + + L+ + D + + Sbjct: 245 FTDSELLDGVVDAYAAGDGASLFTTVERVVESGQDPRRFVEDLSERMRDLILVNAVPTGT 304 Query: 266 TNV------DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 V D + A+ L P+ L + H ++ T + L + ++ R+ Sbjct: 305 EAVLPGVPSDQLDRLRVQASGLGPAELSRASDVLFHGLAEMTGAT--SPRLQLEIIMARL 362 >UniRef50_Q1Q394 Similar to DNA polymerase III subunit gamma/tau n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q394_9BACT Length = 558 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 115/355 (32%), Gaps = 41/355 (11%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P P + L + + R HA L G+G + LS+ L C Sbjct: 9 RYRPQTFSDIVGQAPIVKTLGNAIRTDRVAHAYLFAGPRGVGKTSTARILSKALNCVNGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C CQ + G+ D + G + G+D +R + + + ++ + Sbjct: 69 TDTPCNVCNICQSISEGSDIDVLEI---DGASNRGIDEIRNIRQNVGFAPSRARYRIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP+ F AT RL T++SRC+ Sbjct: 126 DEVHMLTREAFNALLKTLEEPPSHVKFIFATTAANRLPETVQSRCQRFDFKNISVNDIEK 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + AL + + G + ++ + + + Sbjct: 186 HLLEICKTEGKQIESAALHTIAKYAKGGLRDSQSVLDQLFSFCDDNVTSADVNYVLGYID 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMD-------------------ALKRHHGAAQVT 266 YS+ ++ L + +L + A Sbjct: 246 DDKIYSMFECFVNKDTSGALRIVDDILNEGKTPAEFIDQLLLRLRDLLVFSSCGQEAVWA 305 Query: 267 NVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 D + S L ++ + +R + S + + + ++++ Sbjct: 306 EYDE-SFIQRFEKSFSGDTLMYMIQMLSVMR--IRSTDSLLQRISAEMAIIKLCR 357 >UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bacillus cereus group RepID=B7IZ38_BACC2 Length = 548 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 68/364 (18%), Positives = 133/364 (36%), Gaps = 43/364 (11%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-P 53 ++ P + + + + + HA + G G + ++ L C+ Sbjct: 8 KYRPTNFSELIGQNHIKQTIQNALKLAKFSHAYMFTGPRGTGKTTIAKLIATSLNCESLN 67 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + C C C+ ++ +H D + + GV+ +RE+ E++ G KV Sbjct: 68 NEGEPCNECSQCKAIRGNSHADVLEI---DAASNNGVEQIREIREQVAYAPGTGKYKVYI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ A NALLKTLEEPP F LAT + ++ AT+ SRC+ + + Sbjct: 125 IDEVHMLSTGAFNALLKTLEEPPKHVIFILATTDVHKIPATIISRCQRFDFRRIGPRDII 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL------------ 216 L EV + +DAL L+ G AL+L A Sbjct: 185 ERLRHVAIKEEVKIEEDALQLLGMLAQGGMRDALSLMDQTIAFATNETITKDDVSEVVGR 244 Query: 217 -----CQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQVT 266 +A + G+ +L +N ++ L L L D + + Sbjct: 245 ISIEKIEACIGDLLKGNTIEILNLINQVILNGKEPIYLLEDLIGYLRDLVISKAFEVKED 304 Query: 267 NVDVPGLVAELANHLSPSRLQA---ILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 N+ L ++ L + ++ + ++ ++ N ++ + L+++ Sbjct: 305 NITTAILNSKFYELLEEGEIHKMQMMIRKLTEVKNEMKFSN--NAQVSLEVGLIQLATEA 362 Query: 324 QPGV 327 Q Sbjct: 363 QEEN 366 >UniRef50_B8DQU3 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfovibrio RepID=B8DQU3_DESVM Length = 688 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 71/340 (20%), Positives = 121/340 (35%), Gaps = 41/340 (12%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P + L + R A L G+G + L++ L C++ Sbjct: 9 RYRPQTFAEVAGQETVKAILSRAAAEDRVAPAYLFSGTRGVGKTTIARILAKALNCEKAP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ + G H D + G + G++ R + E + G KV + Sbjct: 69 TGEPCNTCEQCRKVVMGNHVDVVEI---DGASNRGIEDARRLREAIGYAPMEGRYKVFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT A NALLKTLEEPP F LAT EP + T+ SRC+ PE Sbjct: 126 DEAHMLTREAFNALLKTLEEPPPRVTFVLATTEPHKFPVTIISRCQHFTFKRLPENELEA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L A+ R +AGS +++L + + + Sbjct: 186 HLTGVLTREGQDFDPAAVRLIARRAAGSVRDSMSLLGQVLALGGDRLTVEGARGVLGLAG 245 Query: 226 SGDWYSLLAALNHE-----------------QAPARLHWLATLLMDA-LKRHHGAAQVTN 267 ++ ++ AL + L LA+ + + R G A + Sbjct: 246 QELFFEVMQALASQDCVAVSAVVRDLLDKGVDIGFFLRELASTWRNLFMLRQAGEAALPA 305 Query: 268 VDVPGL----VAELANHLSPSRLQAILGDVCHIREQLMSV 303 +D+P E A + + A + ++++ Sbjct: 306 LDLPEEEARQWLEWAPKFEITHIHACWQMTLEGQRRVLTS 345 >UniRef50_Q493A4 DNA polymerase III, tau and gamma subunits n=2 Tax=Candidatus Blochmannia RepID=Q493A4_BLOPB Length = 698 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 74/368 (20%), Positives = 134/368 (36%), Gaps = 45/368 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + + ++ + HHA ++ G+G + ++ L C+Q Sbjct: 9 KWRPKKFSDIVGQEHIIQAITHTFSLNKIHHAYILSGTRGVGKTTIARLFAKGLNCEQGT 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ ++ G D + + V+ RE + + G KV + Sbjct: 69 TYTMCGQCNNCKDIELGCFIDLIEI---DAASRTKVEDTREFLDNVQYMPSRGRFKVYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F L T E ++L T+ SRC YL P + Sbjct: 126 DEVHMLSRHSFNALLKTLEEPPTHVKFILVTTEYQKLPETILSRCLQFYLKPLNISQIIN 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + AL + S GS AL+L + N + + + Sbjct: 186 QLTYIFHKENINIETSALESLAYASKGSMRDALSLAEQAIVLGNNEITNNVINNMFGISN 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-------------LMDALKRHHGAAQVTNVDVP- 271 L+ +L E +H + L ++ L++ ++N Sbjct: 246 IEHPLCLIESLIDEDIHNIMHQIENLTVLGVHWDYVFNEILTILQKIAIGQFLSNSVQKE 305 Query: 272 ---------GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 + L+N ++P +Q R +L + + I +LR Sbjct: 306 DNNVTQHINQRMRRLSNRITPENVQLYYQIFLLGRRELPYAP--SHRMGIEMTMLR-ALA 362 Query: 323 LQPGVVLP 330 +P V + Sbjct: 363 FRPDVDIA 370 >UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ85_9FIRM Length = 525 Score = 344 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 78/355 (21%), Positives = 123/355 (34%), Gaps = 42/355 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + L + + R HA L G G + L++ + C++ Sbjct: 8 QWRPQFFADMVGQQHVARTLQNALEQDRLAHAYLFCGPRGTGKTSAAKILAKAINCEKGP 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ +QAG D + + G+D +RE+ EK KV V Sbjct: 68 SREPCNECAACRGIQAGRVMDVQEI---DAASNRGIDEIRELREKARYSPVEVRHKVYIV 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F LAT EP +L AT+ SRC+ Sbjct: 125 DEVHMLTQEAFNALLKTLEEPPGRVLFVLATTEPHKLPATIISRCQRLDFHLIGMTDIAE 184 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ DAL +AG AL+L + + A+ +V Sbjct: 185 RLRSVVDDSGRSIQDDALYLIAEEAAGGLRDALSLLEQIMAYSEGNISDEDVLAVLGAVG 244 Query: 226 SGDWYSLLA-----------------ALNHEQAPARLHWLATLLMDALKRH----HGAAQ 264 +Y A + + D + A Sbjct: 245 RDVYYRFTDSLLRRDLAAALLLLQEVAAGGKDLHHFTRQAISYYRDLMVALTCGDDAVAL 304 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D G + + A L + IL ++ + ++ + LL + RI Sbjct: 305 GIAPDWAGRLHKQARQLGMGTIGHILSELHGLLNEVRWASR--PRLLWELAIFRI 357 >UniRef50_A5N3V9 DnaX n=34 Tax=Clostridium RepID=A5N3V9_CLOK5 Length = 553 Score = 344 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 117/354 (33%), Gaps = 42/354 (11%) Query: 3 WYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 W P D L R HA L G G ++ L++ + C Q Sbjct: 10 WRPKNFSDVVGQNHITVTLKNQILNNRVAHAYLFCGTRGTGKTSMAKILAKAVNCLDIQQ 69 Query: 56 HKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVT 115 + C C C+ + G D + + ++ +++V E + + G KV + Sbjct: 70 GEPCNECEMCKKINQGISMDVIEM---DTASKRKLEDIKDVIENVKYPPQEGKYKVYIMD 126 Query: 116 DAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTW 175 + +LT A NA LKTLEEPP F LAT +P++L T+ SRC+ Sbjct: 127 EVHMLTQEAVNAFLKTLEEPPLNVIFILATTDPQKLPVTILSRCQKFDFRRIKSSEIFNR 186 Query: 176 L-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPS 226 L + +L R+ G+ AL++ + + + V + Sbjct: 187 LRAIVNEEGIFADDRSLNLISRICDGAMRDALSVLDQAISMGSGKVEYNSIVDMLGLVTN 246 Query: 227 GDWYSLLAALNH-----------------EQAPARLHWLATLLMDALKRHH----GAAQV 265 + + L ++ + + + L + L Sbjct: 247 ENLFHLTDSIIEKNVELSMKVIDDIVLSGKDIYNFIKEMIVHLRNLLMVKVSNNPEEILD 306 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + + L+ + A + + + EQ V + + ++++ Sbjct: 307 ISEENIELLKKQAQKIRVEEIMRHINIFQDAEEQSKWVKQ--SRIYLELAVIKM 358 >UniRef50_C4XU00 DNA polymerase III gamma and tau subunit n=2 Tax=Desulfovibrio RepID=C4XU00_DESMR Length = 654 Score = 344 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 77/340 (22%), Positives = 120/340 (35%), Gaps = 41/340 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D L + R A L G+G L L++ L C+ Sbjct: 9 KYRPQRFADVAGQDAVKRILSRAAAEDRIAPAYLFSGTRGVGKTTLARVLAKALNCETAP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ + AG PD + VD R + E + KV + Sbjct: 69 TGEPCNVCSQCRQITAGVSPDVIEI---DAATHGKVDDARRLKEDVGYAPLNSRYKVFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT AA NALLKTLEEPP F LAT EP + AT+ SRC+ + + Sbjct: 126 DEAHMLTTAAFNALLKTLEEPPGRVTFILATTEPHKFPATIISRCQHYLFKRLAQSELEA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L V A+ R AGS +++L + E + + Sbjct: 186 HLSSVLMREAVPYEAKAVSLIARRGAGSVRDSMSLLAQVLALGGAELTEADARGVLGLAG 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLAT----------LLMDA--------LKRHHGAAQVTN 267 ++ L+ A+ E PA + L L + L R G + Sbjct: 246 QEVFFGLIEAIRAEDGPAVVELLRQVLDKGLDIGFFLRELASMWRNLFLLRQAGERALPV 305 Query: 268 VDVPGLVAE----LANHLSPSRLQAILGDVCHIREQLMSV 303 VD+P A A + + + A + ++ + Sbjct: 306 VDLPAEEAGEWLVWAGRIEAAHIHACWQMTLEGQRRVQTS 345 >UniRef50_Q0BVJ3 DNA polymerase III subunit gamma/tau n=8 Tax=Alphaproteobacteria RepID=Q0BVJ3_GRABC Length = 686 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 83/376 (22%), Positives = 128/376 (34%), Gaps = 53/376 (14%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC---- 50 ++ P D L ++ R HA ++ + G+G ++R L C Sbjct: 54 QYRPRHFDDLIGQDALVRTLRNAFALNRVAHAFMLTGVRGVGKTTTARIIARALNCTGAD 113 Query: 51 -QQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 Q CG C C + A HPD + + GVD VRE+ E Sbjct: 114 GQGGPTADPCGVCPNCTAILADRHPDVVEM---DAASRTGVDDVREIIEATRFRPLQART 170 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 KV + + +L+ A NALLKTLEEPP F AT E ++ T+ SRC+ L Sbjct: 171 KVFIIDEVHMLSRNAFNALLKTLEEPPPHVTFIFATTELRKVPVTVLSRCQRFDLRRIDA 230 Query: 170 QYAVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQ------ARETLCQ 218 + V+ S AL R + GS L+L Q E Sbjct: 231 EVLSAHFSRILEQEGVSASPQALALIARAADGSVRDGLSLLDQAIAQNDPGIPISEAQVA 290 Query: 219 ALAYSVPSGDWYSLLAALNHEQAPARLHW----------LATLLMDALKRHHGAAQVTNV 268 + G LL AL + L L +L D L+ H ++ + Sbjct: 291 DMLGLADRGMVLDLLEALMAGDTASALAVTDTAHARGADLGMVLQDLLELIHTLTRLKTI 350 Query: 269 D---------VPGLVA--ELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLL 317 + LA+ L+ L + ++ + +R +L+ Sbjct: 351 PHLRTAPGMAEAERLRGSALADRLAMPVLGRAWQMLLKGIAEVEAAP--DRRAAAEMVLI 408 Query: 318 RIEHYLQPGVVLPVPH 333 R+ + LP P Sbjct: 409 RLCYV----ADLPPPA 420 >UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR83_9FIRM Length = 638 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 70/369 (18%), Positives = 128/369 (34%), Gaps = 42/369 (11%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P + ++ +++ R HA L G G ++ L++ + C + Sbjct: 9 KWRPSTFKEIIGQKHISIPILRAFEQNRLAHAYLFSGPRGTGKTSMARILAKAVNCLDLK 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + G D Y + G + GVD +R + E + G KV + Sbjct: 69 NGNPCNECANCKSINTGASMDVYEI---DGASARGVDEIRVLRESVRTLPVAGNKKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPPA F LAT EP ++ T+ SRC+ + Sbjct: 126 DEVHMLTKEAFNALLKTLEEPPAHVLFILATTEPAKIPLTILSRCQRYEFHRISVNDIKE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNW-----QARETLCQALAYSV 224 L ++++ +A + G AL+L + + + L Sbjct: 186 HLLHISQESHLSLTPEAAALIAVRAEGGLRDALSLLDQCSGASAGNELSAEIVYDLLGLT 245 Query: 225 PSGDWYSLLAAL-----------------NHEQAPARLHWLATLLMDALKRH---HGAAQ 264 L + + ++ A L L + + Sbjct: 246 DKEQIIDLFHMIVCGKSSATLQLFYKILQDGKEPSAILSDLLEHFRSIMICKVNPNAPEL 305 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 + ++ + A LS + L A+ + H + + + + LLR+ Sbjct: 306 SAYGNKISVIQKDAQELSDAYLDALFDSLHHSFSEANRSS--SPRMSAEMGLLRLCRLRG 363 Query: 325 PGVVLPVPH 333 + + Sbjct: 364 SQALDSLEE 372 >UniRef50_D1S8R6 DNA polymerase III, subunits gamma and tau n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S8R6_9ACTO Length = 970 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 75/360 (20%), Positives = 127/360 (35%), Gaps = 47/360 (13%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + E L + ++GR +HA L G G + L+R L C+Q Sbjct: 8 KYRPRTFAEMIGQEQVTEPLSQALRSGRLNHAYLFSGPRGCGKTSSARILARSLNCEQGP 67 Query: 55 GHKSCGHCRGCQLMQ--AGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 + CG C C+ + G D + + GVD RE+ EK K+ Sbjct: 68 TPEPCGQCDSCRGLAPDGGGSIDVIEI---DAASHGGVDDARELREKAFFAPARSRFKIY 124 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + +A +++ A NALLK +EEPP F AT EPE++L T++SR + P + Sbjct: 125 IIDEAHMVSSAGFNALLKLVEEPPEYVKFIFATTEPEKVLGTIKSRTHHYPFRLFPPKVV 184 Query: 173 VTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG-----------------DNW 210 +L V + +R GS +L++ Sbjct: 185 RPYLEQLCEAEGVKVEPAVFPLVVRAGGGSMRDSLSVLDQLIAGAGPEGVGYARAAALLG 244 Query: 211 QARETLCQALAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHHGAAQV 265 L + ++ +GD + A ++ + L L D + Sbjct: 245 VTDAALIDEMCDALAAGDGAAAYATVDRVAEAGHDSRRFASDLLERLRDLIVLQQVPDAA 304 Query: 266 TN------VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D +A A L P+ L V + ++ T LL+ + R+ Sbjct: 305 ARGLIDGPADQIERMAAQAQRLGPATLSRCADIVHNGLVEMRGTTA--PRLLLELICARM 362 >UniRef50_C0GUE6 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUE6_9DELT Length = 561 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 73/373 (19%), Positives = 130/373 (34%), Gaps = 46/373 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P L + R HA L G+G L LS+ + C Sbjct: 9 RYRPQNFAQVAGQDFIKSILSRAAGQDRPSHAYLFSGTRGVGKTTLARILSKAINCYNGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ + G PD + + + GVD VR++ E + G KVV + Sbjct: 69 APEPCNQCSSCEQITRGASPDVWEI---DAASHTGVDNVRKLREDVAYSPMSGRYKVVII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +L+ +A NALLKTLEEPPA F +AT PE+ AT+ SRC+ + Sbjct: 126 DEAHMLSTSAFNALLKTLEEPPAHCVFIMATTAPEKFPATVISRCQHYVFKRLTHGELFA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + V+ ++A+ R +GS ++++ + + + + Sbjct: 186 HLCFVLDTEGVSYEKEAVHLLTRRGSGSVRDSMSMLGQVLALGDEGLKTADVRRVLGLAD 245 Query: 226 SGDWYSLLAALNHEQAPAR-----------------LHWLATLLMDALKRHHGAAQV--- 265 + L+ + + L +A + G + Sbjct: 246 QELFLRLMQHILDQDLVRLHEMVNYLLEQGLDLGFFLQEMAQCWRNMFLLSQGGQEAGKV 305 Query: 266 --TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIE--- 320 + E+A + S + A V R+ ++ + + +L + Sbjct: 306 LDLPAEEVEKWREMAGMFAASTIHAGWQMVLESRKSILGSYE--PGISLELMLYNLAYLP 363 Query: 321 HYLQPGVVLPVPH 333 + P P Sbjct: 364 ELIPVSGYAPEPQ 376 >UniRef50_Q1G919 DNA polymerase III, gamma/tau subunit n=26 Tax=Lactobacillus RepID=Q1G919_LACDA Length = 607 Score = 343 bits (882), Expect = 3e-93, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 131/361 (36%), Gaps = 33/361 (9%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P D + L S G+ HA L G G + ++ L C Q Sbjct: 9 KWRPRTFDDVVGQEAITDTLKNSLIRGKVSHAFLFAGPRGTGKTSCAKIFAKALNCLNLQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C G PD + + VD +R++ +K++ G KV + Sbjct: 69 EGEPCNECSNCLAADQGAMPDIIEM---DAASNNSVDEIRDLLDKVHYAPTEGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ +A NALLKTLEEPPA F LAT E +++ AT+ SR + + + V Sbjct: 126 DEVHMLSISAFNALLKTLEEPPASVVFILATTELQKVPATIISRTQRYNFKRFSNEAMVQ 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 + V AL +++ G AL++ + R + Sbjct: 186 RMEYILGQEGVEYEDKALKVIAQVADGGMRDALSILDQLLSFEKSSVRYEDALEVTGFAA 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLV----------- 274 LL AL + + L + + D + ++ ++ V ++ Sbjct: 246 QEQVEKLLLALLNGDSQMALDLAKSAIQDGASAQNILNEIISLTVQAMLFTKTGQGEFLT 305 Query: 275 AELANHLSPSRLQAILGDVCHIREQLMSVTGINRELL-ITDLLLRIEHYLQPGVVLPVPH 333 + A ++ + + L S+ N++ + + L++ + P Sbjct: 306 DDFAQEIAQQSPDRFSQIIDQANDALGSLRFTNQQQIPLEVFLVQASQ--KRQNSQAGPQ 363 Query: 334 L 334 + Sbjct: 364 V 364 >UniRef50_A9BMI7 DNA polymerase III, subunits gamma and tau n=18 Tax=cellular organisms RepID=A9BMI7_DELAS Length = 731 Score = 343 bits (882), Expect = 3e-93, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 133/371 (35%), Gaps = 46/371 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-- 52 ++ P + L + R HHA L G+G + L++ L CQ Sbjct: 9 KYRPRNFSEMVGQEHVVQALTNALTQQRLHHAYLFTGTRGVGKTTVSRILAKSLNCQGAD 68 Query: 53 ---PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 CG C C + +G PDY L + GVD V+ + E+ G Sbjct: 69 GQGGITATPCGVCAACTEIDSGRFPDYTEL---DAASNRGVDEVQSLLEQAVYKPVQGRF 125 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 KV + + +LT+ A NA+LKTLEEPP F LAT +P+++ T+ SRC L P Sbjct: 126 KVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNLRPMAP 185 Query: 170 QYAVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQAL 220 + + L V AL R + GS AL+L + Q +E + + Sbjct: 186 ETVLEHLGQVLGQEGVASEPQALRLLSRAARGSMRDALSLTDQAIAFGSGQLQEATVRQM 245 Query: 221 AYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVP--------- 271 SV + L+ AL + L + L ++ V Sbjct: 246 LGSVDRSHVFRLIEALAQADGQVVVETSEALRRNGLSAASTLEEMCAVLQRMAVAQAVPQ 305 Query: 272 ----------GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 +A LA + Q + H R +L +T LLR+ Sbjct: 306 MAADASDPEAAEIARLAVLMPRDETQLLYSICLHGRAELGLAPDEYA--ALTMALLRLL- 362 Query: 322 YLQPGVVLPVP 332 +P P P Sbjct: 363 AFKPQSAEPAP 373 >UniRef50_C2D9N9 DNA polymerase III gamma and tau subunits n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9N9_9ACTN Length = 742 Score = 343 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 76/358 (21%), Positives = 123/358 (34%), Gaps = 50/358 (13%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + HA L G G + ++ LLC PQ Sbjct: 7 KYRPAVFQDVVGQTHVVSTLQNAVLEHKIGHAYLFCGPRGTGKTTMARLFAKALLCTSPQ 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVW 113 CG C C+ + G HPD + L + GVD VRE + +++N G K+ Sbjct: 67 NGLPCGVCETCKNIAQGIHPDVFEL---DAASRTGVDNVREEIIDRVNYAPLKGAYKIYI 123 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT +A NALLKTLEEPP+ F L T EP ++LAT+ SR Sbjct: 124 IDEVHMLTASAFNALLKTLEEPPSHVVFILCTTEPHKILATILSRVMRFDFHRIKSDEMF 183 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 L + +AL + + G AL+ + + L + + + Sbjct: 184 VHLQKVCTLEHFSADDEALKLIVEHAQGGMRDALSSLEQISVFGKGVISKRLVEDMLGAT 243 Query: 225 PSGDWYSLLAALNHEQAPARLH-----------------WLATLLMDA-LKRHHGAAQVT 266 + +L+ +L LA + D L + +T Sbjct: 244 SQTNLTALVQSLALRDTKRLFEEIASLCEQGKSIVQAACELAEYMRDVYLAKTLMEQHLT 303 Query: 267 NVDVPGL---------VAELANHL-SPSRLQAILGDVCHIREQLMSVTGINRELLITD 314 D L + A + + +L V + + T N L Sbjct: 304 LDDYAELFTCGVATSQLEADAQAFKNVRHIAYVLNVVVDMISHIK--TAANPRLTFEL 359 >UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUL1_HALO1 Length = 649 Score = 343 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 84/368 (22%), Positives = 136/368 (36%), Gaps = 46/368 (12%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L ++ R HHA L G+G L + L C++ Sbjct: 9 KYRPNTFSEVVGQEHVTRTLANAFAKDRVHHAFLFCGPRGVGKTTAARILGKALNCERGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C+ + GT DY+ + G + G+DA+RE+TE + + KV + Sbjct: 69 TAEPCGSCVACETITNGTAVDYFEM---DGASNRGIDAIRELTEAVRYQPAVLRKKVYVI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F LAT EP ++ T+ SRC+ + P + Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPPHVSFVLATTEPHKVPNTILSRCQRYDFKLVPAPKLIE 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQALAYSV 224 L + E+ + A+ +R S GS +L+L E+ + Sbjct: 186 HLRRIFAAEEIEVDSGAISLIVRESGGSVRDSLSLCDQVISYVGTSNIGESDVAEVLGVA 245 Query: 225 PSGDWYSLLAALNHEQAPARLH-----------------WLATLLMDALKRHHGAAQVTN 267 +L++AL A + L + L D Sbjct: 246 DRSLTRTLVSALAEGDAKSALEAVEAADARGVDEVQLARAIVRYLRDLAVMQVAPEAEGL 305 Query: 268 VD----VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 +D + E A LS R+ + + L L++ L+ + Sbjct: 306 IDGSEEEAAELREHAGRLSRERVTQMFDRMVQACNDLADTQ--MPRLVLDLALIDVAAL- 362 Query: 324 QPGVVLPV 331 VLP+ Sbjct: 363 --EPVLPL 368 >UniRef50_B4UA58 DNA polymerase III, subunits gamma and tau n=3 Tax=Aquificaceae RepID=B4UA58_HYDS0 Length = 421 Score = 343 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 74/365 (20%), Positives = 134/365 (36%), Gaps = 36/365 (9%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L ++ + HHA + G G ++ L C PQ Sbjct: 9 KYRPKTFKELIGQEIPATILKNAFLYQKIHHAYIFAGHKGTGKTTTARIFAKVLNCLNPQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C CQ ++ GT D + + G+D +R V E + G KV + Sbjct: 69 EGEPCNACPNCQAIEKGTFVDLIEM---DAASNRGIDEIRAVREGASYLPMQGKYKVYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT A NALLKT+EEPP F L T E +++L T++SRC+ + ++ T Sbjct: 126 DEAHMLTKEAFNALLKTIEEPPPSLIFILCTTEFDKILPTIQSRCQKLVFSRASKENIKT 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 +L + + ++AL L+ S A +L N + + +++ V Sbjct: 186 YLRRIANQENIEIDEEALDVLSDLADDSMRDAASLLDQASTYGNNKVTIDIVKSMFGPVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL----LMDALKRHHGAAQVTNVDVPGLVAELANHL 281 L L ++ L T+ L ++ N+ + E Sbjct: 246 KASIRKFLELLIESDTKEAINMLNTINEKGYNVRLFWEGVYKEIKNILKAFAIGEAEEEF 305 Query: 282 SPSRLQAILGDVCHIREQLMSVTGI----NRELLITDLLLR---------IEHYLQPGVV 328 L+ L ++ + + + L + +L+ I L+ + Sbjct: 306 YKKMLEKPLEVFLYLEDIINQGFSAMYQKDPILALEITVLKASLIKDFVPISELLKESLD 365 Query: 329 LPVPH 333 LP Sbjct: 366 LPTKS 370 >UniRef50_B7K934 DNA polymerase III, subunits gamma and tau n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K934_CYAP7 Length = 730 Score = 343 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 71/352 (20%), Positives = 119/352 (33%), Gaps = 43/352 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQ--Q 52 ++ P D + L+ + R A L G G + L++ L C Sbjct: 9 KYRPQTFMDLVGQEAIAQTLINAITTNRIAPAYLFTGPRGTGKTSSARILAKSLNCLSSD 68 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C+ + + D + + GVD +RE+ E+ KV Sbjct: 69 KPTPIPCGTCEVCKAIARSSALDIIEI---DAASNTGVDNIREIIERAQFAPVQCRYKVY 125 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ AA NALLKTLEEPP F LAT +P+R+L T+ SRC+ P + Sbjct: 126 VIDECHMLSVAAFNALLKTLEEPPNHVVFVLATTDPQRVLPTIISRCQRFDYRRIPLEDM 185 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAAL---ALFQGDNWQARETLCQALAYSV 224 V L + + +A+ +++ G A + L ++ Sbjct: 186 VKHLKLIANKESIDIDDEAITLVAQIANGGLRDAESLLDQLSLLSGTITPARVWELVGAI 245 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTN 267 P D LL A+ + L LA ++ + + Sbjct: 246 PELDLLKLLKAIASKDPTHILDSCRHLMNRGKEPLTILQNLAGFYLNLVIAKTAPTRSDL 305 Query: 268 VDVPG----LVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDL 315 V V + + A + + + QL T L + Sbjct: 306 VAVTASTWTQLCQEAQQWNLEEILQGQQHLKESEAQLKHTTQ--PRLWLEVT 355 >UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAH1_DESAH Length = 590 Score = 343 bits (881), Expect = 4e-93, Method: Composition-based stats. Identities = 70/368 (19%), Positives = 126/368 (34%), Gaps = 51/368 (13%) Query: 1 MRWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P + L + +GR HA+L+ G G + L++ + C+ Sbjct: 8 LKYRPQTFDEVVGQPHVTTTLKNAILSGRVPHAILLTGPRGTGKTTIARILAKAMNCETG 67 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 C C+ C + AG+ D + + G + VD VRE+ E + K+ Sbjct: 68 PTPTPCNICKTCTNITAGSAVDVFEI---DGASNNSVDQVRELRENVAYMPSSSKFKIYI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ AA NALLKTLEEPP F AT E ++ T+ SRC+ H L Sbjct: 125 IDEVHMLSMAAFNALLKTLEEPPDHVIFIFATTEVHKIPVTILSRCQRHDLGRISLAQIS 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQ-------------GDNWQARET 215 L + ++SQ++ + GS +L+L + Sbjct: 185 AHLMTLAAAEGFSISQESCDLLAGEADGSMRDSLSLLDRILGSQAQTSEQTSGPRAIDDD 244 Query: 216 LCQALAYSVPSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKR 258 + + L A+ + + L + Sbjct: 245 KILGTLGIIDKTLVFDLADAIIQNRGADIIDLVDRIHTLGLDLKRFYASLIRHFRNLAVV 304 Query: 259 HHGAAQVTNVDV----PGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITD 314 + D+ +A L LS S L IL + + + + + Sbjct: 305 KVSSNDKNTCDISDHDRQRMAALTAPLSQSFLNQILNTLLVDESLVKLSS--HTRTAVEM 362 Query: 315 LLLRIEHY 322 +LL++ Sbjct: 363 VLLKLVQI 370 >UniRef50_Q6ABA1 DNA polymerase III subunit gamma n=4 Tax=Propionibacterium acnes RepID=Q6ABA1_PROAC Length = 957 Score = 343 bits (881), Expect = 5e-93, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 120/360 (33%), Gaps = 47/360 (13%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P E L + R +HA L G G L+R L C+Q Sbjct: 113 RYRPETFDEVIGEDHVIEPLKRAILNNRVNHAYLFSGPRGCGKTTTARILARALNCEQGP 172 Query: 55 GHKSCGHCRGCQLMQAGT--HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C+ C+ + G D + + GVD R++ E+ K+ Sbjct: 173 TPTPCGTCQSCRDLACGGPGSIDVIEI---DAASHGGVDDARDLRERAFFAPVHSRYKIY 229 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + +A ++T NALLK +EEPP F AT EPE+++ T+RSR + P + Sbjct: 230 IIDEAHMVTPQGFNALLKLVEEPPPHVKFIFATTEPEKVIGTIRSRTHHYPFRLVPPKVL 289 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQAR-------------- 213 V +L + + L +R GS +L++ A Sbjct: 290 VEYLAELCGKEGIDVDHAVLPLVVRAGGGSVRDSLSVLDQLLGGAADGHVSYEQAAALLG 349 Query: 214 ---ETLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQ- 264 E L + + +GD + + A ++ + L + D + Sbjct: 350 YTPEALLDEIVDAFAAGDAHQVFATIDKVIEVGQDPRRFAEDLLRRMRDLVIVSAVPDAC 409 Query: 265 -----VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + + +A + L + + T L + + RI Sbjct: 410 RSGLIDVSPEQATRLAHQVSGFGAGELTRAAEVLATGLTNMRGTTA--PRLHLELMCSRI 467 >UniRef50_A6QBX8 DNA polymerase III, gamma/tau subunits n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QBX8_SULNB Length = 666 Score = 343 bits (881), Expect = 5e-93, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 129/341 (37%), Gaps = 30/341 (8%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L + R HA L L G G + ++ LLC+Q Sbjct: 8 KYRPATFDDLIGQDSVSQTLSLALDGNRLSHAYLFSGLRGSGKTSTARIFAKALLCEQGT 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + H D + + G+D ++++ E K+ + Sbjct: 68 TSHPCGTCTHCVMAAENRHMDIIEM---DAASNRGIDDIKDLIEHTKYKPSSARYKIFII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F LAT +P +L AT+ SR + P+ ++ Sbjct: 125 DEVHMLTTQAFNALLKTLEEPPDFVKFILATTDPLKLPATILSRTQHFRFKKIPQNLVLS 184 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L ++ ++AL R AGS +L L ++ + + + Sbjct: 185 HLEHIMNLEKIEYEKEALEIIARSGAGSLRDSLTLLDQAIVYSKNFVDVGTVTGMLGIIE 244 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAEL---ANHLS 282 +LL + + L ++ L + A + + L L + L+ Sbjct: 245 PSLLEALLGNIVKKDTTKILEFIK------LASDYEAEMILDELTLYLKELLLTGSGKLN 298 Query: 283 PSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 P ++ + + L + + E +++ L ++ L Sbjct: 299 PMIIERFFRVIAESKSLLALGS--DGEFVLSLALFKMMEAL 337 >UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJR0_FERNB Length = 517 Score = 343 bits (880), Expect = 6e-93, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 122/332 (36%), Gaps = 31/332 (9%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + + + +HA + G G L++ L C++ Q Sbjct: 7 KYRPKNFYDIVGQEHIKKLLTNALKLQKINHAYIFAGPRGTGKTTTARILAKSLNCEKNQ 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C CQ + G+H D L + G+D +R++ E +N +G KV + Sbjct: 67 FGEPCNECTSCQAIDNGSHLDVIEL---DAASNRGIDEIRKIKEGVNFTPVMGKYKVYII 123 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F LAT PE++ T+ SRC + E+ ++ Sbjct: 124 DEVHMLTREAFNALLKTLEEPPQHIVFILATTNPEKIPPTIMSRCHVLEFRNISEENIIS 183 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L ++ +AL + + G AL+ + + E + + Sbjct: 184 KLKSVCEKEGFDVTYEALKKIAKRAEGGLRDALSTLEQVIRYTGGEVTEKIVDEALGLIS 243 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 + A + + +L D N + + + + Sbjct: 244 EETIEKFIEATLNNDR----ELIEKILNDIYIERGDFDTFINQLIEKTLEKKED------ 293 Query: 286 LQAILGDVCHIREQLMSVTGINRELLITDLLL 317 +L L + +LLI L+ Sbjct: 294 --NMLKLASDFYNVLKEIRFAEEKLLIARLMF 323 >UniRef50_C2MCK6 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteroidales RepID=C2MCK6_9PORP Length = 429 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 75/358 (20%), Positives = 125/358 (34%), Gaps = 43/358 (12%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-P 53 ++ P + L ++ Q G+ HA L G+G + L+R + C+Q Sbjct: 11 KYRPQTFDEMLGQEAICLTLKSAIQQGKIAHAYLFCGPRGVGKTSAARILARTINCEQLT 70 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 ++CG C CQ + Y L + VD +R + E + + G KV Sbjct: 71 PQGEACGVCANCQAALHQRAFNIYEL---DAASNNSVDDIRRLNEDVYIRPQQGKYKVYI 127 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ A NA LKTLEEPP F LAT E +++L T+ SRC+++ P P + Sbjct: 128 IDEVHMLSSGAFNAFLKTLEEPPGYVVFILATTEKDKVLPTILSRCQVYDFKPIPPEQIA 187 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQ------GDNWQARETLCQALAY 222 L + + + R++ G AL+LF D + E Q L Sbjct: 188 EQLRRVADAEGLQYDPRSFDTIARIADGGMRDALSLFDRLASTAQDGVISYEQTLQTLNI 247 Query: 223 SVPSGDWYSLLAALNHE----------------QAPARLHWLATLLMDALKRHHGAAQVT 266 +Y + + + LA + + L Sbjct: 248 LDDEYYFYFTTYLYSGDYKRTLLLLDELLGKGVAMRQLIIGLADFMRNLLVARTPETMQL 307 Query: 267 NV---DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEH 321 A LA + P L + + S + LL+ + I Sbjct: 308 FPYTGVHAERFATLAQQIHPLFLYKSISKLVSCERNYRSSQA--KRLLVELTFMGISE 363 >UniRef50_C8WB95 DNA polymerase III, subunits gamma and tau n=4 Tax=Zymomonas mobilis RepID=C8WB95_ZYMMN Length = 628 Score = 342 bits (879), Expect = 8e-93, Method: Composition-based stats. Identities = 76/373 (20%), Positives = 130/373 (34%), Gaps = 50/373 (13%) Query: 2 RWYPWLRPD-------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC---- 50 ++ P D L + R HA L+ + G+G + +++ L C Sbjct: 17 KYRPQKFSDLIGQDAMVRTLGNAIARDRLAHAFLLTGVRGVGKTSTARLIAKALNCVGKD 76 Query: 51 -QQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGA 109 CG C C+ + G H D + + GVD +R++ E + + Sbjct: 77 GHGGMTIDPCGECEACRAIAEGRHIDVVEM---DAASHTGVDDIRDIVESVRYASVSARF 133 Query: 110 KVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPE 169 KV + + +L+ +A NALLKTLEEPPA F AT E ++ T+ SRC+ L Sbjct: 134 KVYIIDEVHMLSKSAFNALLKTLEEPPAHVKFLFATTEINKVPITVLSRCQRFDLRRIST 193 Query: 170 QYAVTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQAL 220 + S +V ++AL + + GS L++ + + + Sbjct: 194 ATLTDYFSKVVQLEQVEAEEEALAMIAKAAEGSVRDGLSILDQAIAHSSGSILAADVREM 253 Query: 221 AYSVPSGDWYSLLAALNHEQAPARLHWL----------ATLLMDALKRHHGAAQ------ 264 G SLL L + L + LL L+ H + Sbjct: 254 LGLSDRGVIKSLLVDLLEGKGDRVLDHVKAQYDLGVEPEALLHGLLQLIHAITRSKMGRP 313 Query: 265 ----VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIE 320 + + +AEL LS L + + ++ N L + + + Sbjct: 314 DNLTLHPTEEEIWLAELGKKLSFPVLHRLWQLLLKGHSEVQ-----NAVLPLEAAEMALL 368 Query: 321 HYLQPGVVLPVPH 333 + LP P Sbjct: 369 RVIHASQ-LPDPA 380 >UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERB2_AMOA5 Length = 629 Score = 342 bits (879), Expect = 8e-93, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 131/376 (34%), Gaps = 50/376 (13%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + HA L G+G L++ + CQQ Sbjct: 10 KYRPSVFSHVLGQAHITTTLKNAIRTNHLAHAFLFCGPRGVGKTTCARILAKAINCQQLT 69 Query: 55 GH-KSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + C C C+ T + Y L + V+ VR + +++ + G K+ Sbjct: 70 ADIEPCNACDSCKSFNQRTSFNIYEL---DAASNNSVEDVRSLVDQVRYPPQNGAYKIYI 126 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ AA NA LKTLEEPP+ F LAT E ++L T+ SRC++ + V Sbjct: 127 IDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTEKHKVLPTILSRCQIFDFQRIKPEDIV 186 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQALAYS 223 L + ++AL + G+ AL++F G E + L + Sbjct: 187 QQLKNVSEQEHIPYDEEALHLISLKADGALRDALSMFDVIVSFGAGKLTYEATLENL-HI 245 Query: 224 VPSGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHGAAQVT 266 + ++ L A+ A L L L + Sbjct: 246 LDYSCYFKLTEAILQNDIKACLLIYDEIIQSGFDGLYFLEGLVAHFRSLLVAQ-DPQTLP 304 Query: 267 NVDVPGLVAE----LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 ++V + E A SP L L L +N+ + L+ + Sbjct: 305 LLEVAPSIQERYGMQAQQASPGFLLDALQLANQC--ALQYKESLNKRFHVELALIELASK 362 Query: 323 LQPG----VVLPVPHL 334 + G VLP P + Sbjct: 363 MSTGHPKDSVLPNPGV 378 >UniRef50_B4CYL6 DNA polymerase III, subunits gamma and tau n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYL6_9BACT Length = 598 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 115/355 (32%), Gaps = 35/355 (9%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 L + R A L G G + ++ L C CG C C+ Sbjct: 6 QAHIVTTLKNAIAQNRLAQAYLFVGPRGTGKTSTARIFAKALNCVHAPTTNPCGVCDMCK 65 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVT-EKLNEHARLGGAKVVWVTDAALLTDAAA 125 + AG + + VD +RE+ + + G K+ V + +L++++ Sbjct: 66 EIAAGNSLNVLEF---DAASNTQVDKIREIIIDNVKYAPTRGNYKLYIVDEVHMLSNSSF 122 Query: 126 NALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREV 180 NALLKTLEEPP F AT + +++ T+ SRC+ L P L + Sbjct: 123 NALLKTLEEPPPHVKFVFATTDVQKVPTTIISRCQRFDLRRIPTPEIAQHLLFIAGKEAI 182 Query: 181 TMSQDALLAALRLSAGSPGAALALFQGDN----------------WQARETLCQALAYSV 224 ++ A + R + G A ++ L + Sbjct: 183 ELTPTAAESIARGAEGGLRDAESMLDQLVAFCGDKIDEQNVLNIFGFTARQTVAELCEHL 242 Query: 225 PSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQV---TNVDVPGLVAE 276 +G + L A+ + + L L + L + + + + Sbjct: 243 INGHTGAALGAIQKQSDAGKDLSRLMADLIEHLRNLLVAQSAPETLHEDLSAEAIAELTA 302 Query: 277 LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPV 331 A ++ +L ++ ++ N+++ +R L + V Sbjct: 303 QAGRIAADKLLNLIEQFADAESRMKWAA--NKKMHFEIAAIRAVQTLGQASLTEV 355 >UniRef50_C5PXF7 DNA polymerase III, tau and gamma subunits n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PXF7_9SPHI Length = 596 Score = 342 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 130/361 (36%), Gaps = 44/361 (12%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-P 53 ++ P + L + + A L G+G L++ + C+ Sbjct: 10 KYRPVTFDSVVGQQHITGTLKNAIHNNQLAQAFLFCGPRGVGKTTCARILAKTINCEHIT 69 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 ++CG C C+ Q G + L + VD +R + +++ + G K+ Sbjct: 70 SEVEACGVCDSCKSFQNGNSFSIHEL---DAASNNSVDDIRNLIDQVRIPPQSGKYKIYI 126 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ A NA LKTLEEPP+ F LAT E ++L T+ SRC++ + Sbjct: 127 IDEVHMLSQQAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRIRVEDMA 186 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 L VT D L + + G AL++F N Q + Sbjct: 187 RHLAGIAEKEVVTYDLDGLHIIAQKADGGLRDALSMFDQIVSFSNKQISYQSVIDNLNIL 246 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTN 267 ++ L A+ E+A L L++ L + L A + Sbjct: 247 DYDYYFKLTDAILQEEAAESLLIFDQVLNRGFDGNHFIGGLSSHLRNLLVTKE-PATLKL 305 Query: 268 VDVPGLVA----ELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 +DV + E + +S L + L + T N+ L + LL++ H Sbjct: 306 LDVSDNIKKRYLEQSQKVSSGLLLSALNISNQCE--INYKTSKNQRLQVELALLKMCHIA 363 Query: 324 Q 324 Sbjct: 364 T 364 >UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Tax=Thermosipho africanus TCF52B RepID=B7IDS2_THEAB Length = 480 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 122/320 (38%), Gaps = 29/320 (9%) Query: 2 RWYPWLRPDF------EKL-VASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + L + S + G HA + G G + L++ L C+ Sbjct: 7 KYRPKLFSEVVGQNHVKTLFLNSLKNGEISHAYIFAGPRGTGKTTVARILAKSLNCENKN 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G + C C CQ + G+ D + + G+D +R++ E + HA G KV + Sbjct: 67 GVEPCNKCNTCQSIDNGSFMDVLEI---DAASNRGIDEIRKIRETVGYHAAQGNYKVYII 123 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP+ F LAT PE++ T+ SRC++ + + Sbjct: 124 DEVHMLTKEAFNALLKTLEEPPSNVVFILATTNPEKIPQTIISRCQVIDFKNLTIEDIIK 183 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + +SQ+AL + + G AL + + + + VP Sbjct: 184 RLEFVCKKENINISQEALNEIAKRANGGMRDALTILEQVSKSSSKDITIEDVRETLGLVP 243 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 ++ ++ + + G + L+ E+ + Sbjct: 244 IEVINEMIDSIKIGDIKKTTEIIEKVY------FSGKDPEVF--LMQLLEEMILKIESGD 295 Query: 286 --LQAILGDVCHIREQLMSV 303 L L + I + + Sbjct: 296 YELIEFLKPLSEILKDIKYS 315 >UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1Z8_ERYRH Length = 600 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 78/362 (21%), Positives = 132/362 (36%), Gaps = 40/362 (11%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L S + HA L G G ++ +R + C+ P Sbjct: 9 KYRPAHLDEVVGQEHVVNVLKNSITKNKISHAYLFCGPRGTGKTSIAKLFARAVNCENPD 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 CG C C + GTHPD + + GVD +R + EK+ LG KV + Sbjct: 69 QVI-CGTCDNCLAVADGTHPDLIEI---DAASNNGVDEIRGLIEKVKYTPILGKYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP+ F LAT E ++L T+ SRC+ + E Sbjct: 125 DEVHMLSQGAFNALLKTLEEPPSHVVFILATTEIHKVLPTIISRCQRYDFNRIGEVDIAK 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L + V Q LS G AL + + A + + + Sbjct: 185 RLDYVLNNENVEAEQGVSKLIASLSGGGLRNALTILEQAIVLADDQITVNQIYDTNGIIT 244 Query: 226 SGDWYSLLAALNHEQAPARLHWLA----------TLLMDA--------LKRHHGAAQVTN 267 D +L ++ +Q A ++ +A L+MD + H + + N Sbjct: 245 DQDKINLFDSIREQQMEALVNQIAMMNEKSVNIDRLMMDLVSGLKDSIIYSHTKSDALVN 304 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 + + LA L ++ + +++ N+ ++ + + Sbjct: 305 ENSLMFIHYLAETLQVHERLKVIEKLLSYTDKMKFSQ--NQSTYFEVAMVDVFNSFSNKN 362 Query: 328 VL 329 V Sbjct: 363 VN 364 >UniRef50_C0JZX8 DNA polymerase III subunit gamma/tau n=1 Tax=uncultured bacterium URE4 RepID=C0JZX8_9BACT Length = 577 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 76/369 (20%), Positives = 131/369 (35%), Gaps = 42/369 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 ++ P L S + G+ HA L G+G ++ + C P Sbjct: 10 KYRPDSFETLLGQDNIARTLSNSIKRGQLAHAYLFCGPRGVGKTTTARIFAKMINCAHPG 69 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + CG C C Q G Y + + GVD ++ + E++ ++G V Sbjct: 70 PDMEPCGECESCVSFQEGRS---YCIHELDAASNNGVDDIKALIEQVQVPPQVGKYSVYI 126 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +L+ +A NA LKTLEEPPA F LAT E ++L T+ SRC+ + V Sbjct: 127 IDEVHMLSQSAFNAFLKTLEEPPAHAIFVLATTEKHKILPTILSRCQTYDFNRIGIPDMV 186 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG-----DNWQARETLCQA---- 219 L +T+ ++L + + G+ AL +F E + + Sbjct: 187 RNLRGIAAKEGITIDDESLHVIAQKADGAMRDALTIFDQTVAFCGTDIKYEDVVRNLNVL 246 Query: 220 -------LAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHHGA--AQV 265 + + SG + + L++ + A + L++ L D + A + Sbjct: 247 DYDYSFGMVENFLSGSYAAALSSFDEILSKGFNALHFVAALSSHLRDLVVARTAGLDALL 306 Query: 266 TNVD-VPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 D + E A L LG +N L I L+++ Sbjct: 307 ELPDSLKQRYREQAARCPLQFLYDALGVTTACEA--GYKAAVNPRLHIEFALMKLSFLTG 364 Query: 325 PGVVLPVPH 333 V P Sbjct: 365 RTDVSAAPR 373 >UniRef50_C7Q5N1 DNA polymerase III, subunits gamma and tau n=2 Tax=Actinomycetales RepID=C7Q5N1_CATAD Length = 863 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 78/360 (21%), Positives = 123/360 (34%), Gaps = 48/360 (13%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P + L + + GR +HA L G G L+R L C+Q Sbjct: 25 RYRPETFEEVVGQEHVTLPLQQALRNGRVNHAYLFSGPRGCGKTTSARILARCLNCEQGP 84 Query: 55 GHKSCGHCRGCQLMQAGTH--PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG CR C + G D + + GVD R++ E+ K+ Sbjct: 85 TPTPCGTCRSCVELANGGSGSIDVIEI---DAASHGGVDDARDLRERAFFAPAASRFKIY 141 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + +A ++T A NALLK +EEPP F AT EPE+++ T+RSR + P Sbjct: 142 IIDEAHMVTSAGFNALLKVVEEPPPHLKFIFATTEPEKVIGTIRSRTHHYPFRLIPPGVL 201 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARE------------- 214 L + + + L +R AGS A+++ A E Sbjct: 202 REHLNDITAREGIKVEPEVLPLVVRAGAGSARDAMSVLDQLLAGADENGVTYAMATGLLG 261 Query: 215 ----TLCQALAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHH----- 260 L L + D ++ ++ L L D + + Sbjct: 262 YTDAALLDRLVEAFAGNDGAAVFGLVDQVVESGHDPRRFLTDLLERFRDLVVLNAVTDAG 321 Query: 261 GAAQVTNV--DVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 A + +V D +A A S L V ++ T LL+ + R Sbjct: 322 AARALIDVPDDQFERMAGQARSFGASELSRAADLVNTGLTEMRGATA--PRLLLELVCAR 379 >UniRef50_B2RJ68 DNA polymerase III, gamma and tau subunits n=2 Tax=Porphyromonas gingivalis RepID=B2RJ68_PORG3 Length = 602 Score = 341 bits (875), Expect = 2e-92, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 129/370 (34%), Gaps = 42/370 (11%) Query: 1 MRWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P L +S + HA L G+G + +R + C + Sbjct: 10 LKYRPDSFASMVGQEALSATLKSSIVQQKTAHAYLFCGPRGVGKTSCARIFARAINCLER 69 Query: 54 -QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 ++CG C C+ + Y L + VD +R + E+ N ++G K+ Sbjct: 70 LPDGEACGRCESCKAFDEQRSMNIYEL---DAASNNSVDDIRLLIEQANVPPQIGKYKIY 126 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + + +L+ A NA LKTLEEPP+ F LAT E ++L T+ SRC++ P Sbjct: 127 IIDEVHMLSQQAFNAFLKTLEEPPSYVIFILATTEKHKILPTILSRCQIFDFKRIPPARI 186 Query: 173 VTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQ-----GDNWQARETLCQA--- 219 L + +AL + G AL+LF + + Sbjct: 187 EQHLRYVADSEGIKAEAEALAIIATKADGGMRDALSLFDRIARFSEGNITYANTIENLNI 246 Query: 220 --------LAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHHGAAQVT 266 L GD+ S+L L+ + LA+ D + + Sbjct: 247 LDYDYYFRLTDFFLQGDYRSVLIVLDELLAKGFDGQVIVSGLASFFRDLMMAQDASTLPL 306 Query: 267 NVDVPGLVAE---LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYL 323 ++ +A S L L + +Q G + LL+ L+ I Sbjct: 307 LEQSEVVIQRYVDMAARCPTSFLYQSLKILNACDQQYRQSNG--KRLLLELSLMNIAALF 364 Query: 324 QPGVVLPVPH 333 G+ P P Sbjct: 365 SKGLTAPPPT 374 >UniRef50_A4XJ39 DNA polymerase III, subunits gamma and tau n=2 Tax=Clostridia RepID=A4XJ39_CALS8 Length = 535 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 66/355 (18%), Positives = 128/355 (36%), Gaps = 43/355 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + + HA + G G ++R + C P+ Sbjct: 8 KYRPKVFEDVVAQEHITKTLKNQIKQDKVAHAYIFTGPRGTGKTTTAKIMARAVNCLNPK 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C CQ + D + + V+ VR++ +++ + +V + Sbjct: 68 DGNPCNECEVCQSILNEKTLDVLEI---DAASNTSVNDVRQIRDEVRYPPSMCKRRVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPPA F LAT + +++ AT+ SRC+ + Sbjct: 125 DEVHMLSTGAFNALLKTLEEPPAHALFILATTDIQKVPATILSRCQRFDFKRISVKDIYE 184 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARE----TLCQALAYSVP 225 L ++++ AL + + G+ AL + + + E L Sbjct: 185 RLKKVVELEKISIDDQALYLISQKAEGALRDALTILERCVNTSDEHISYKFVANLLGVTS 244 Query: 226 SGDWYSLLAALNHE-----------------QAPARLHWLATLLMDALKRHHGAAQVTNV 268 + L A+ L +L +AL GA V + Sbjct: 245 TEIVKEYLNAIVENDSNKGLRVVNRLWDEGMDVNTFLEESIKILRNALILRLGAQNVL-L 303 Query: 269 DVPGL----VAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D+ V L+N L +R+ +++ + Q+ ++L+ +++ Sbjct: 304 DMMDEDKSFVTNLSNLLDSNRIVSVIKMLIDTANQIRWTRF--PKVLLEINTIKL 356 >UniRef50_C8WQ66 DNA polymerase III, subunits gamma and tau n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQ66_ALIAD Length = 586 Score = 340 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 84/355 (23%), Positives = 138/355 (38%), Gaps = 42/355 (11%) Query: 3 WYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG 55 + P D + L + ++G+ HA L G G + L++ + C QP+ Sbjct: 10 YRPQTFEDLVGQPHVRQTLTNALKSGQLAHAYLFCGPRGTGKTSTAKLLAKAVNCLQPRD 69 Query: 56 H-KSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C +Q G++ D + + GVD +R++ + ++ + KV V Sbjct: 70 GFEPCNACEACTSIQRGSNVDVQEI---DAASNRGVDEIRDLRDHVHYLPTMAKKKVYIV 126 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPPA F LAT EP RL AT+ SRC+ + V Sbjct: 127 DEVHMLTPEAFNALLKTLEEPPAHVLFVLATTEPHRLPATIISRCQRFDFRRIAPEAIVE 186 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + + AL + G ALALF+ N + +T + SV Sbjct: 187 RLRLVAQSQGIEAADSALWRLAEAADGGLRDALALFEQAAAFGNGRIDDTTVADVVGSVD 246 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLL----------MDALKRHHGAAQVTNVDVPGLV- 274 G +L+ L + + L D L+ V P + Sbjct: 247 IGSLVALVGDLAGRSFLSAMDRLGRWYASGKDASRIVHDLLQVVRDLFIVKLSQSPDALA 306 Query: 275 -------AELANH--LSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIE 320 +A+ ++ L A + + + QL V L + +L+ + Sbjct: 307 GKPVDPYQPVASRDDVTVDWLLAAMRKLGELYTQLRYVEE--PRLALEAVLMGLA 359 >UniRef50_B6BKU4 DNA polymerase III gamma and tau subunits DnaX n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKU4_9PROT Length = 585 Score = 340 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 125/343 (36%), Gaps = 24/343 (6%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + L + + R HA L L G G + ++ L+C+Q Sbjct: 11 KYRPSNFDELIGQDTIAQTLSLALDSNRLSHAYLFSGLRGSGKTSTARIFAKALICEQGM 70 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 H+ CG C+ C+L H D + ++ +D +R++ E+ K+ + Sbjct: 71 SHEPCGVCQNCKLAVENRHMDIVEM---DAASSRKIDDIRDLIEQTKYRPASARFKIFII 127 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPPA F LAT +P +L AT+ SR + + + Sbjct: 128 DEVHMLTKEAFNALLKTLEEPPAYVKFILATTDPLKLPATILSRTQHFRFKSIATKKIID 187 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARE----TLCQALAYSVP 225 L+ E+ DAL R GS L L ++ + V Sbjct: 188 HLAHILNLEEIKYETDALEILARSGNGSLRDTLTLLDQAIIYSKNHVDVNTVTDMLGLVD 247 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 L +A+ + + + + +L D + + + S Sbjct: 248 PKFIMDLFSAVFAKDYASLVQY-TKILEDYEAEMVVDELIAY--LKERMYNQDALFSTLV 304 Query: 286 LQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 L + + + +++ + ++ L+ V Sbjct: 305 LDRFFRILSDSKSLF--SINADGSFVLSLIFFKMVEALRIKEV 345 >UniRef50_Q1MPV7 DNA polymerase III, gamma/tau subunits n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MPV7_LAWIP Length = 574 Score = 340 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 76/339 (22%), Positives = 124/339 (36%), Gaps = 41/339 (12%) Query: 1 MRWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +R+ P + + L + + A L+ G+G + ++ L CQQ Sbjct: 8 IRYRPQSFKEVVGQEIVKKILSRAAAESKVVPAYLLSGTRGVGKTTIARIFAKALNCQQA 67 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + C C C+ + G H D + G + GVD R + E + G KV Sbjct: 68 PTAEPCNTCEQCKRITKGIHVDVVEI---DGASNRGVDDARRLRESIAYAPMEGRYKVFI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + +A +LT + NALLKTLEEPP + F AT EP + T+ SRC+ L P ++ + Sbjct: 125 IDEAHMLTRESFNALLKTLEEPPPFSTFVFATTEPHKFPVTIISRCQHFVLKPLTKEELI 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 L + +A+ R ++GS +++L N E + + + Sbjct: 185 YNLIHVLKQENICYEDNAIQLIARRASGSIRDSMSLLGQTLMFSNGILTENVVRNVLGLA 244 Query: 225 PSGDWYSLLAALNHEQAPA-----------------RLHWLATLLMDALKRHHGAAQVTN 267 + LL A + L ATL + + N Sbjct: 245 EQEFYEKLLRAFKDQNYEEVVKLNQILLEKGVDLGFFLREFATLWRNLFLLRKVSKLDAN 304 Query: 268 -----VDVPGLVAELANHLSPSRLQAILGDVCHIREQLM 301 D + LAN P L A V + Q++ Sbjct: 305 MLGMLPDEIPRLTSLANLFEPIYLHAAWQMVLENQRQIL 343 >UniRef50_D1AZL2 DNA polymerase III, subunits gamma and tau n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZL2_SULD5 Length = 546 Score = 340 bits (873), Expect = 4e-92, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 119/344 (34%), Gaps = 24/344 (6%) Query: 1 MRWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P + L ++ R HA L L G G + ++ L+C+Q Sbjct: 8 LKYRPSSFDKLIGQEAITQTLSSALNQNRLSHAYLFSGLRGSGKTSTARIFAKALVCEQG 67 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 C C C H D + + G+D +RE+ E K+ Sbjct: 68 PNATPCDVCEHCLSANENRHIDIIEM---DAASNRGIDDIRELIESTKYKPSSARFKIFI 124 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT A NALLKTLEEPP+ F LAT +P +L AT+ SR + + + Sbjct: 125 IDEVHMLTTQAFNALLKTLEEPPSYVKFILATTDPLKLPATILSRVQHFRFKQIKQSDVI 184 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDN----WQARETLCQALAYSV 224 L ++ ++AL R GS L L + + Sbjct: 185 NHLCHILNLEKIEYEKEALEMLSRAGNGSLRDTLTLLDQAIIYSKGYITPEHVATMLGLL 244 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPS 284 +L +A+ + L + TL ++ + ++ + E S Sbjct: 245 DPKQLETLFSAILNGNKTELLGLIKTL--ESYECEVVMDELIAY-LKNAFFEQDRRFSTL 301 Query: 285 RLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 + + + L N +++ +L ++ + Sbjct: 302 LYERFFKILSEAKSLL--YINANNGFILSLVLFKMVEATHIKTI 343 >UniRef50_UPI00017455DA DNA polymerase III, gamma and tau subunits n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017455DA Length = 676 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 72/378 (19%), Positives = 127/378 (33%), Gaps = 50/378 (13%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + R HA L G G + ++ L C Sbjct: 23 KYRPRTFEDVLGQDHVVRTLRNAIAQNRLAHAYLFVGPRGTGKTSTARIFAKALNCPNGP 82 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C ++ G D + G + GV+ VRE+ E++ K+ ++ Sbjct: 83 RVDFDPDDEVCVEIEKGISLDVREI---DGASNNGVEQVRELREEVKFAPTRCRYKIYYI 139 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ AA NALLKTLEEPP F AT E ++L T+ SRC+ L P Sbjct: 140 DEVHMLSTAAFNALLKTLEEPPEHVKFIFATTEAHKVLPTIISRCQRFDLRRIPAGLIAK 199 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDN----------------WQAR 213 L +V +S+ A A + + G A ++ R Sbjct: 200 HLLHIATLEKVALSEKAAYAIAKGAEGGMRDAQSMLDQLVAFCGERIEEQDVLDIFGFTR 259 Query: 214 ETLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRH---HGAAQV 265 LA V D L L+ + L L L A + Sbjct: 260 GETVANLAARVLDRDTVGALKELHSQADTGKDLGRLLTDLIQHFRTLLVHQVDPAAAEED 319 Query: 266 TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR------- 318 + +V +V + + + L ++ + + ++ + N+ L + +++ Sbjct: 320 LSPEVADMVRQQSAMVQAESLLRVMDGLAEVDARMRWAS--NKLLHLEIGVIQAVQTLGE 377 Query: 319 --IEHYLQPGVVLPVPHL 334 + ++ P P L Sbjct: 378 VTLSEVIEALGGAPSPDL 395 >UniRef50_B8HBY1 DNA polymerase III, subunits gamma and tau n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HBY1_ARTCA Length = 1202 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 69/360 (19%), Positives = 121/360 (33%), Gaps = 47/360 (13%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P L+ + + R +HA L G G L+R L C + Sbjct: 10 RYRPDSFADVIGQEHVTGPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARCLNCAEGP 69 Query: 55 GHKSCGHCRGCQLMQAGTH--PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C + G D + + GVD R++ E+ K+ Sbjct: 70 TDTPCGVCPSCVELARGGSGSLDVIEI---DAASHGGVDDARDLRERATYAPVRDRYKIF 126 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + +A ++T A NALLK +EEPP F AT EP++++ T+RSR + P + Sbjct: 127 IIDEAHMVTSAGFNALLKIVEEPPEHIKFIFATTEPDKVIGTIRSRTHHYPFRLVPPEPL 186 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG-----------------DNW 210 + +L V ++ L +R GS +L++ Sbjct: 187 MAYLELLCNQENVPVAPGVLSLVIRAGGGSVRDSLSVLDQLMAGAGPNGLDYELAVALLG 246 Query: 211 QARETLCQALAYSVPSGDWYSLLAALNHE-----QAPARLHWLATLLMDALKRHHGAAQV 265 +L + +V + D ++ A++ + L D + Sbjct: 247 YTHASLLDDVVEAVAASDAATVFRAVDRVIQTGHDPRRFVEDLLERFRDLIIVQAMPESA 306 Query: 266 TN------VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 D + A++L + L ++ T + L + L RI Sbjct: 307 QVILRGMPADQIARLQNQAHNLGAAELSRAADVTNTALTEMTGAT--SPRLHLELLCARI 364 >UniRef50_Q1NUY3 DNA-directed DNA polymerase n=5 Tax=Deltaproteobacteria RepID=Q1NUY3_9DELT Length = 706 Score = 339 bits (871), Expect = 7e-92, Method: Composition-based stats. Identities = 81/359 (22%), Positives = 138/359 (38%), Gaps = 43/359 (11%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP- 53 +W P RP L + + R HA+L + G+G L +++ L CQ+P Sbjct: 9 KWRPRTFAEVVGQRPVVRTLQNALRLQRVAHAMLFAGVRGVGKTTLARLMAKALNCQEPE 68 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 + C C+ CQ + AG D + + G + G+ +RE+ E + K+V Sbjct: 69 PASRPCNQCKSCQEINAGAAVDLHEI---DGASNRGIQEIRELKENIRFLPVSASYKIVI 125 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT A NALLKTLEEPPA +F AT E ++ T+ SRC+ + L + Sbjct: 126 IDEVHMLTTEAFNALLKTLEEPPAHVYFMFATTELHKIPITILSRCQRYELTRVAYDELL 185 Query: 174 TWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSV 224 + EVT+S+ AL R + GS L+L + + + L V Sbjct: 186 AFFRQVAAREEVTISEAALAMISREADGSVRDGLSLLDQVFSFADGGIDDDDVRQLLGLV 245 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQVTN 267 + L AL + L L + + A Sbjct: 246 DRRVFAQLARALLAGELGRALEIFDRGQRAGMNLKRFAADLLDYFRNLVVCRATAGARQL 305 Query: 268 VDVPG----LVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHY 322 +++ + E+A SP L + E++ + +L++ ++R Sbjct: 306 LELGEQELVELEEIAAAHSPETLLYCFNLLLKGIEEMQYASR--PKLVLEMTMVRAVEA 362 >UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 Tax=Alkaliphilus RepID=A8MKQ3_ALKOO Length = 563 Score = 339 bits (871), Expect = 7e-92, Method: Composition-based stats. Identities = 66/350 (18%), Positives = 120/350 (34%), Gaps = 42/350 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P L + HA L G G + +R + C + Sbjct: 9 RFRPKVFEDVIGQDQVITILKNQISSSNIAHAYLFTGTRGTGKTSTAKIFARAVNCLSAE 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + D + + GVD VRE+ E + G K+ + Sbjct: 69 DANPCNQCEVCEGILTENIMDVIEI---DAASNNGVDNVREIRENVKYPPSKGKYKIYII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP+ F LAT EP ++ AT+ SRC+ P + Sbjct: 126 DEVHMLSTGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRFDFKPVRINDIMK 185 Query: 175 WLSR-----EVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETL----CQALAYSVP 225 L + ++AL S G+ AL++ + +TL + V Sbjct: 186 RLESICEDIGIKTEEEALRLIALNSDGALRDALSILEQCISYTEDTLTYTNVVNILGMVN 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDA---------------------LKRHHGAAQ 264 + L+ + + + L + +LM+ + Sbjct: 246 YEFIFDLVDKIAAKDTSSVLTLINDILMEGKDAGILMKDIISHFRSILLAKMNVQLDELL 305 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITD 314 + + + + +++ + + ++ I +L + LI Sbjct: 306 TLPEERQDRLRQQGALFTINQITSFIYNLSDIESKLKYSAQ--PKTLIEI 353 >UniRef50_Q3B0U5 DNA polymerase III, tau subunit n=14 Tax=Cyanobacteria RepID=Q3B0U5_SYNS9 Length = 625 Score = 339 bits (870), Expect = 9e-92, Method: Composition-based stats. Identities = 78/340 (22%), Positives = 123/340 (36%), Gaps = 41/340 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ-- 52 ++ P L + + R A L G G + L+R L CQ Sbjct: 11 KYRPQRFDQLVGQEAITATLGNALTSNRIAPAYLFSGPRGTGKTSSARILARSLNCQNSD 70 Query: 53 PQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 + CG C C+ + +GT D + + GVD +RE+ E+ KV Sbjct: 71 GPTPEPCGTCDLCRTIASGTALDVIEI---DAASNTGVDNIRELIERSRFAPVQARWKVY 127 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 V + +L+ AA NALLKTLEEPP + F LAT +P+R+L T+ SRC+ P Sbjct: 128 VVDECHMLSTAAFNALLKTLEEPPPQVVFVLATTDPQRVLPTILSRCQRFDFRRIPLDAL 187 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNW---QARETLCQALAYSV 224 L + + +A+ + S G A +L + L +V Sbjct: 188 EQHLTWIAEQESIAIQPEAIHVVAQRSQGGLRDAESLLDQLSLLPPPIEANAVWDLLGAV 247 Query: 225 PSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQV-- 265 P + +L A+ + A L LA +L D + + Sbjct: 248 PEQELLALAQAMTSSEPVALLEATRNLLDRGRDPGAVLQGLAGVLRDLVLMAAAPNRPEL 307 Query: 266 --TNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSV 303 + + ELA + +RL + +QL Sbjct: 308 TGVSPQFRDQLPELAKSIGRTRLLQWQAQLRGAEQQLRQS 347 >UniRef50_C1ZCQ4 DNA polymerase III, subunit gamma/tau n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCQ4_PLALI Length = 682 Score = 339 bits (870), Expect = 9e-92, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 117/355 (32%), Gaps = 42/355 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P + + L + GR HA L G+G ++ ++ L C Sbjct: 12 RFRPQTFSEVVGQDRIAQTLRNAILEGRVAHAYLFTGARGVGKTSMARIFAKALNCPNAV 71 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C+ + AG D + G + G+D +R + +N + KV + Sbjct: 72 EAVPCNTCEICRAVSAGQDVDVSEI---DGASNRGIDDIRTLRANVNVKSMRTRYKVYII 128 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPP F T EP +L T+ SRC+ + Sbjct: 129 DEVHMLTKEAFNALLKTLEEPPQGVKFIFCTTEPNKLPDTILSRCQRFDFGTVNIESIGE 188 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + +A+ R + GS + +LF + L + Sbjct: 189 RLRQIANTEGFQVDDEAIELVSRRANGSMRDSQSLFDQVLAFGHQHVTVADVHRLLGTAS 248 Query: 226 SGDWYSLLAALNHEQAPARL-----------------HWLATLLMDALKRHHGAAQVTN- 267 L+ AL A L L + L D + G + Sbjct: 249 DDRVIELVQALIDRHAARALEALDQAILDGVQLDALTDQLISYLRDLMVTAAGVKGIALL 308 Query: 268 ---VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 V A + A L + + ++ T L L+RI Sbjct: 309 GATESSRSRVETQAEAWGLKTISAALQILAEAKIKMARAT--WGRALTELALVRI 361 >UniRef50_B6BTP5 DNA polymerase subunits gamma and tau n=1 Tax=beta proteobacterium KB13 RepID=B6BTP5_9PROT Length = 512 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 71/356 (19%), Positives = 118/356 (33%), Gaps = 31/356 (8%) Query: 2 RWYPWLRP-------DFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 +W P E L S R HHA L+ G+G + ++ L C Sbjct: 9 KWRPKNFETIVGQEFIVEALKNSILGDRLHHAYLLSGTRGVGKTTIARIFAKCLNCHTGS 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 C C C + D L + VD +RE+ E N K+ + Sbjct: 69 NPTPCCECSSCVEIDQSKSIDVIEL---DAASNTQVDNMRELLENANYQPTSSKYKIFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ ++ NA+LKTLEEPP F LAT +PE++ T+ SRC L Sbjct: 126 DEVHMLSKSSFNAMLKTLEEPPEHVIFILATTDPEKIPVTVISRCLHFNLMQMTNDEISG 185 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + +A+ + + GS AL+L N + Sbjct: 186 QLQNIFYEENIAYEDEAINMISKHADGSMRDALSLADRVINYTNGNVSLEKLTQILGITS 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL------LMDALKRHHGAAQVTNVDVP----GLVA 275 G LL + L L L ALK + + Sbjct: 246 DGVIDELLTNILDNNKQKVLDLLNKLKEHHISYESALKVLSEKIFAISEEQTFGGGNKSI 305 Query: 276 ELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPV 331 + +S LQ + + + L ++ + ++R+ +++ V + Sbjct: 306 QRGKQVSLQLLQTLYQISINGLKDLPFSP--SQHIGFRMTIIRLLNFIPTNNVNAI 359 >UniRef50_A8PNF7 DNA polymerase III subunit tau n=1 Tax=Rickettsiella grylli RepID=A8PNF7_9COXI Length = 523 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 81/357 (22%), Positives = 127/357 (35%), Gaps = 36/357 (10%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + L + + R HHA L G+G L L++ L CQ Sbjct: 9 KYRPQSFDELIGQESTCRILKNALRTQRIHHAYLFTGTRGVGKTTLARLLAKCLNCQTQI 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C CQ + A D + + V+ R++ ++ G K+ + Sbjct: 69 TPEPCNQCISCQAIHANRFTDLIEV---DAASRTKVEDTRDLLADVHYTPSQGRYKIYLI 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ + NALLKTLEEPP F LAT + +RL AT+ SRC +L Sbjct: 126 DEVHMLSSHSFNALLKTLEEPPPHVIFLLATTDTQRLPATILSRCLQFHLKTITTVQISN 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGD----NWQARETLCQALAYSVP 225 L ++ +AL + + GS AL+L N + L V Sbjct: 186 QLANILKKEKIPFEPEALAPLAQAAQGSLRDALSLLDQAIAYTNQNLTKQDINTLLGHVA 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL---------LMDALKRHHGAAQV-----TNVDVP 271 + LL AL E + +MD L + T V+ Sbjct: 246 HSEIIQLLDALILEDTAKLWSLVEQFSELGVDFSCVMDELLTCLHQMALSQRFKTEVNYT 305 Query: 272 GLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVV 328 + + A LSP +Q V R + L +LLR+ +P Sbjct: 306 QTIIDFAQTLSPEAIQLYYQIVLFSRRDITLAP--TPRLGFEMMLLRLL-AFKPAGD 359 >UniRef50_C5ZV42 DNA polymerase III subunits gamma and tau n=2 Tax=Helicobacter RepID=C5ZV42_9HELI Length = 586 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 74/360 (20%), Positives = 129/360 (35%), Gaps = 40/360 (11%) Query: 1 MRWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P L + ++ R HA L L G G + +R L C++ Sbjct: 9 LKYRPMDFDELVGQESVSRTLSLALESKRLSHAYLFSGLRGSGKTSSARIFARALQCEKG 68 Query: 54 QGHKSCGHCRGCQLMQAG--THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKV 111 K CG C C H D L G ++ +D +R++ E+ H +G K+ Sbjct: 69 PKAKPCGVCANCIAANPHKMRHIDIIEL---DGASSRKIDDIRDLIEQTKYHPNMGRYKI 125 Query: 112 VWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQY 171 + + +LT A NALLKTLEEPP F LAT +P +L AT+ SR + E+ Sbjct: 126 FIIDEVHMLTKEAFNALLKTLEEPPEYVKFILATTDPLKLPATILSRTQHFRFKRISEKN 185 Query: 172 AVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAY 222 L +T +AL +R +GS L L N+ C + Sbjct: 186 IFEHLKNILHKENITYQDEALNMLIRSGSGSLRDTLTLLDQVIIYSNYNITADSCANMLG 245 Query: 223 SVPSGDWYSLLAALNHEQAPARLHWLA-------TLLMDALKRHHGAAQVTNVDVPGLVA 275 + L + + + L + +L+D + + D Sbjct: 246 LINPQSLNMLFEEIFKKDKESLLKHIEGFSEYECEMLLDEMAIFLKEKLLRGED------ 299 Query: 276 ELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ-PGVVLPVPHL 334 S + + + +E L + + L ++ ++ L+ + + L Sbjct: 300 ---TRYSATIIDRFFRIITQAKELLSLGSDDSFVLTLSI--FKMLEALKIQEIDKAIETL 354 >UniRef50_A7HGU5 DNA polymerase III, subunits gamma and tau n=5 Tax=Cystobacterineae RepID=A7HGU5_ANADF Length = 606 Score = 338 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 117/352 (33%), Gaps = 40/352 (11%) Query: 2 RWYPWLR-------PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P L + + G+ HA L G+G +++ L C++ Sbjct: 9 KYRPQQFGEMSGQQHVVRTLSNALKTGQLAHAFLFTGPRGVGKTTTARLVAKALNCEKGP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + CG C C + G D + + GVD VR++ E + KV V Sbjct: 69 TAEPCGACTPCVEIAEGRAVDVVEI---DAASNNGVDNVRDIVEAVKYRPARDRYKVFVV 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEPP F LAT + ++ T+ SRC+ Q Sbjct: 126 DEVHMLSTGAFNALLKTLEEPPEHVKFVLATTDVHKVPETILSRCQRFDFRRLTLQQIAD 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + + ++ AL R + G AL+L E +V Sbjct: 186 QLAKVAEAEGMRLAPGALALVARQAEGGMRDALSLLDQVRAAAGDAPDEAAVAEALGAVD 245 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPS- 284 + + AL H + A L L L L+ A ++ +VA L Sbjct: 246 AAAISRICGALVHREGGALLAELEALHARGLEMKRVAEEIVRHLRNVVVARLVPATPLDL 305 Query: 285 ------------------RLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 +L + Q+ + LL Sbjct: 306 PDGELAEVRAQAAAADPAQLTRLFDLAQRAVVQVKLSEQ--PRYALEVALLE 355 >UniRef50_A7NLI5 DNA polymerase III, subunits gamma and tau n=2 Tax=Roseiflexus RepID=A7NLI5_ROSCS Length = 644 Score = 338 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 118/341 (34%), Gaps = 34/341 (9%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 L + GR HA L G+G + L++ + C P + CG C C+ Sbjct: 21 QEHVVRTLRNAIAEGRVAHAYLFTGPRGVGKTTVARLLAKAVNCTAPPAERPCGVCESCR 80 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 + G D + + V+ RE+ E++ + KV + + +L+ AA N Sbjct: 81 SIAEGRAVDVIEM---DAASHTSVEDAREIIERVQFRPAVARTKVYIIDEVHMLSTAAFN 137 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVT 181 ALLKTLEEPP F LAT E ++ AT+ SRC+ L VT Sbjct: 138 ALLKTLEEPPPHALFILATTEVHKVPATILSRCQRFVFNRHTVASIAAHLRMIATQEGVT 197 Query: 182 MSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPSGDWYSLLAALN 237 + A A R + GS AL++ + L + + +L+ AL Sbjct: 198 LEPGAAEAIARAATGSMRDALSVLDQLMAYGGGTVSLEQVRNLLGASEMQEVTTLVDALI 257 Query: 238 HEQAPARLH----------WLATLLMDALKRHHGAAQV----------TNVDVPGLVAEL 277 P L L D ++R + + + Sbjct: 258 AADLPGALRVVADVAAAGADLRQFTRDLVERLRALMLICAGADRSLLDVAEEEAAQIERQ 317 Query: 278 ANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLR 318 A +S L + + QL + +L + ++ Sbjct: 318 ARTVSLGDLMRWVKLFSELDYQLRISSYG--QLPLELAVIE 356 >UniRef50_C1CYE9 Putative DNA polymerase III, subunits gamma and tau n=1 Tax=Deinococcus deserti VCD115 RepID=C1CYE9_DEIDV Length = 762 Score = 338 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 78/312 (25%), Positives = 119/312 (38%), Gaps = 18/312 (5%) Query: 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ 66 + L A+ + GR HA L G+G ++ C K CG C C Sbjct: 19 QEHVKDVLRAALEQGRVGHAYLFSGPRGVGKTTTARLIAMTANC-SGPLPKPCGECESCL 77 Query: 67 LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN 126 ++AG+HPD + + VD VR++ EK++ A GG K+ + +A +++ AA N Sbjct: 78 SVRAGSHPDVLEI---DAASNNSVDDVRDLREKVSLAAMRGGKKIYILDEAHMMSRAAFN 134 Query: 127 ALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVT 181 ALLKTLEEPP+ F LAT EPE+++ T+ SRC+ + + L V Sbjct: 135 ALLKTLEEPPSHVIFILATTEPEKIIPTILSRCQHYRFRRLTAEEIAGKLSGLAAKEGVR 194 Query: 182 MSQDALLAALRLSAGSPGAALALFQ---GDNWQARETLCQALAYSVPSGDWYSLLAALNH 238 DAL RL+ G+ +L + + P + AL Sbjct: 195 AEPDALQLIGRLADGAMRDGESLLERMLAAGTAVTRVAVEEALGLPPGERVRGIAGALVL 254 Query: 239 EQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAEL------ANHLSPSRLQAILGD 292 A + L A L D + + L AEL RL + Sbjct: 255 GDAGSALQGAAQLYRDGFAARTVVEGLVSALGTALHAELGLSGERLEGADVPRLLKLQAA 314 Query: 293 VCHIREQLMSVT 304 + + Sbjct: 315 LDEQEARFARSA 326 >UniRef50_B4S8V3 DNA polymerase III, subunits gamma and tau n=11 Tax=Chlorobiaceae RepID=B4S8V3_PROA2 Length = 617 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 67/372 (18%), Positives = 116/372 (31%), Gaps = 54/372 (14%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + + + R H + L G+G ++ + CQ+ Sbjct: 9 KYRPSKFADITAQEHITHTIQNALRLDRVGHGYIFSGLRGVGKTTAARVFAKAVNCQKMI 68 Query: 55 GH--------KSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARL 106 + CG C C AGT + + VD +R++ E + + Sbjct: 69 DDPVYRQEVTEPCGECESCLDFDAGTSLNISEF---DAASNNSVDDIRQLRENVRYGPQK 125 Query: 107 GGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAP 166 G +V + + +L+ AA NA LKTLEEPP+ F AT E ++ AT+ SRC+ Sbjct: 126 GRYRVYIIDEVHMLSTAAFNAFLKTLEEPPSHAIFIFATTELHKIPATISSRCQRFNFKR 185 Query: 167 PPEQYAVTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQG---------DNWQA 212 P + L + +S DALL R + GS A ++ Sbjct: 186 IPIGEIQSQLQMICRAETLQISDDALLLIARKAQGSMRDAQSILDQVIAFSVGNDAEKVI 245 Query: 213 RETLCQALAYSVPSGDWYSLLAALNHEQA-----------------PARLHWLATLLMDA 255 L + ++ + A+ L L + Sbjct: 246 AYQGVAELLNYIDDDQFFDVSDAVAENDPVKMLQVARFVIDNGYDEQDFLEKLIEHFRNF 305 Query: 256 LK---RHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLI 312 L V + A LS + ++ + +L Sbjct: 306 LVLYNLRSTRLIERTESVKERYQQSAGGLSAPLVMQLIDLLMKESGELKFQFEYQFR--F 363 Query: 313 TDLLLRIEHYLQ 324 LLR+ + Sbjct: 364 ELTLLRLIELVH 375 >UniRef50_A1V9U7 DNA polymerase III, subunits gamma and tau n=5 Tax=Desulfovibrionales RepID=A1V9U7_DESVV Length = 622 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 119/340 (35%), Gaps = 41/340 (12%) Query: 2 RWYPWLRPDFE-------KLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P + L + Q R A L G+G + ++ L C Sbjct: 9 RYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVGKTTIARIFAKALNCATAP 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ + G H D + G + G+D + + E + G KV + Sbjct: 69 TGEPCNTCEQCRKVTQGMHVDVVEI---DGASNRGIDDAKRLKEAIGYAPMEGRYKVFII 125 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT A NALLKTLEEPPA F LAT EP + T+ SRC+ E Sbjct: 126 DEAHMLTREAFNALLKTLEEPPARVTFVLATTEPHKFPVTIVSRCQHFTFTRLSEAGLEA 185 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L V A+ R +AGS +++L + + + Sbjct: 186 HLTKVLGREGVDYDPAAVRLIARRAAGSVRDSMSLLGQVLALGESRLTIDGARGVLGLAG 245 Query: 226 SGDWYSLLAALNHE-----------------QAPARLHWLATLLMDA-LKRHHGAAQVTN 267 + L+ AL + L L + + R G A + + Sbjct: 246 QELFLRLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFMLRQAGEAALAS 305 Query: 268 VDVPGLVAEL----ANHLSPSRLQAILGDVCHIREQLMSV 303 +D+P A A P+ + A + ++++ Sbjct: 306 LDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRVLTS 345 >UniRef50_C8PKZ6 DNA polymerase III subunit tau n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PKZ6_9PROT Length = 763 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 119/340 (35%), Gaps = 24/340 (7%) Query: 1 MRWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQP 53 +++ P + L + +GR HA L L G G + ++ LLC + Sbjct: 6 LKYRPKSFEQLIGQDAVAKSLAHALDSGRLSHAYLFSGLRGSGKTSTARIFAKALLCDKG 65 Query: 54 QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVW 113 K C C C + G H D + + +D +RE+ E+ H K+ Sbjct: 66 PTGKPCEVCDNCVMANEGRHIDIIEM---DAASHRKIDDIRELIEQTKYHPASARFKIFI 122 Query: 114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAV 173 + + +LT A+NALLKTLEEPPA F LAT +P +L T+ SR + P + V Sbjct: 123 IDEVHMLTKEASNALLKTLEEPPAYVKFILATTDPLKLPVTVLSRTQHFRFKPIAKSAVV 182 Query: 174 TWLS-----REVTMSQDALLAALRLSAGSPGAALALFQGDNWQARE----TLCQALAYSV 224 L+ + AL R +GS L L +RE + + Sbjct: 183 AHLAQILKTENIAYEDGALEILARSGSGSLRDTLTLLDQAIIFSREGITQRAIADMLGLL 242 Query: 225 PSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPS 284 +L + + + + ++ ++ + A S Sbjct: 243 DPAKIGEILDIVLRQDRAGAIEIIKE--VENYNAETIIDEMIANLKDKFLRRDAK-FSLL 299 Query: 285 RLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 + + + L + I+ ++ + + Sbjct: 300 MYERFFRILAGAKSML--AISPDNTYAISMMIFMMMEAVN 337 >UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBX8_THET1 Length = 550 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 71/340 (20%), Positives = 127/340 (37%), Gaps = 41/340 (12%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ + L+ + ++G+ HA L G G + L++ + C + Sbjct: 8 KYRSQTFDELVGQEHVKKTLINAIKSGKIAHAYLFCGPRGTGKTSTARLLAKAVNCLS-E 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 G K C C C + G D + + V+ V ++ E++N KV + Sbjct: 67 GTKPCNSCSACLSINEGRAVDLIEI---DAASRRKVEDVADIIERVNFAPAELRYKVYII 123 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +LT A NALLKTLEEPPA F LAT E ++L T+ SRC+ + V Sbjct: 124 DEVHMLTTHAFNALLKTLEEPPAHAIFVLATTEVWKVLPTIISRCQRFDFRRITPREIVE 183 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L+ + + +DAL+A + S GS A+++ + + + L V Sbjct: 184 RLAFIAENENIKIQKDALIAIAKASTGSLRDAISILDQLTVYGDEEITLEHVKQLLGIVG 243 Query: 226 SGDWYSLLAALNHEQAPARLHWLATL-----------------LMDALKR----HHGAAQ 264 + + A+ A L L L L D + + + Sbjct: 244 EDVVANFVGAIIDNDTQAALSLLTQLSEHGVDPRQFTQELVSYLRDLMLLKAYNQNASKA 303 Query: 265 VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVT 304 +++ A+ +S RL I + + + + Sbjct: 304 GIERVSLQAISDQASMVSIGRLHEITEKFSTLDYTIRTGS 343 >UniRef50_A0JSD4 DNA polymerase III, subunits gamma and tau n=4 Tax=Micrococcineae RepID=A0JSD4_ARTS2 Length = 1078 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 123/360 (34%), Gaps = 47/360 (13%) Query: 2 RWYP-------WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 R+ P E L+ + + R +HA L G G L+R L C + Sbjct: 10 RYRPDSFADVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARCLNCAEGP 69 Query: 55 GHKSCGHCRGCQLMQAGTH--PDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVV 112 CG C C + G D + + GVD R++ E+ K+ Sbjct: 70 TDTPCGKCPSCIELARGGSGSLDVIEI---DAASHGGVDDARDLRERATYAPVRDRYKIF 126 Query: 113 WVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYA 172 + +A ++T A NALLK +EEPP F AT EP++++ T+RSR + P + Sbjct: 127 IIDEAHMVTSAGFNALLKIVEEPPEHIKFIFATTEPDKVIGTIRSRTHHYPFRLVPPEPL 186 Query: 173 VTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG-----------------DNW 210 + +L V ++ L +R GS +L++ Sbjct: 187 MAYLELLCNQENVPVAPGVLSLVIRAGGGSVRDSLSVLDQLMAGAGPTGLDYELAVALLG 246 Query: 211 QARETLCQALAYSVPSGDWYSLLAALNH-----EQAPARLHWLATLLMDALKRHHGAAQV 265 +L + +V + D ++ A++ + L D + Sbjct: 247 YTHASLLDDVVEAVAASDAATVFRAVDRVIQTGHDPRRFVEDLLERFRDLIIVQAMPESA 306 Query: 266 TN------VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRI 319 + D + A++L + L ++ T + L + L RI Sbjct: 307 QSILRGMPADQIARLQNQAHNLGAAELSRAADVTNTALTEMTGAT--SPRLHLELLCARI 364 >UniRef50_Q1JL73 DNA polymerase III subunit gamma/tau n=74 Tax=Streptococcaceae RepID=Q1JL73_STRPC Length = 561 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 69/366 (18%), Positives = 125/366 (34%), Gaps = 47/366 (12%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ + L + ++G+ HA L G G + ++ + C Sbjct: 8 KYRSQTFDEMVGQSVISTTLKQAVESGKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQV 67 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C+ + G+ D + + GVD +R++ +K KV + Sbjct: 68 DGEPCNQCDICRDITNGSLEDVIEI---DAASNNGVDEIRDIRDKSTYAPSRATYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 + +L+ A NALLKTLEEP F LAT E ++ AT+ SR + ++ Sbjct: 125 DEVHMLSTGAFNALLKTLEEPTENVVFILATTELHKIPATILSRVQRFEFKAIKQKAIRE 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNW-----QARETLCQALAYSV 224 L + DAL R + G AL++ Q + + + S+ Sbjct: 185 HLAWVLDKEGLAYEVDALNLIARRAEGGMRDALSILDQALSLSPDNQVTIAIAEEITGSI 244 Query: 225 PSGDWYSLLAALNHEQAPARL-----------------HWLATLLMDALKRHHGAAQVTN 267 + ++ EQA L L T L D L G Sbjct: 245 SILALGDYVRYVSQEQATQALAALETIYDSGKSMSRFATDLLTYLRDLLVVKAGGDN--- 301 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGV 327 V + LS R+ ++ V ++ T + + + +++ + Sbjct: 302 -QRQSAVFDTNLSLSIDRIFQMITVVTSHLPEIKKGT--HPRIYAEMMTIQLA---KEEG 355 Query: 328 VLPVPH 333 V +P Sbjct: 356 V-ALPS 360 >UniRef50_B5YKX9 DNA polymerase III subunit gamma/tau n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKX9_THEYD Length = 512 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 122/357 (34%), Gaps = 40/357 (11%) Query: 2 RWYPWLRPDF-------EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P D + L S Q G+ HA + G+G + L++ L C Q Sbjct: 9 KYRPQKFSDLTGQDVVIKILQNSLQTGKISHAYVFSGPKGVGKTSTARILAKALNCIDSQ 68 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 +K C C C ++ G + + V+ +R++ E + + G KV + Sbjct: 69 -NKPCDKCPSCVAIKEGRAMSVIEI---DAASHTSVENIRDLRENIRYASAEGFYKVYII 124 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +L+ +A NA LKTLEEPP F LAT EP ++ T+ SRC+ P Sbjct: 125 DEAHMLSQSAFNAFLKTLEEPPPHVVFVLATTEPRKIPLTVLSRCQHLQFKRIPINLIKQ 184 Query: 175 WL-----SREVTMSQDALLAALRLSAGSPGAALALFQGDNW---QARETLCQALAYSVPS 226 L + +++AL S GS AL + + L Sbjct: 185 RLQFICNQENINATEEALYTIASNSEGSMRDALTMLDQVTSFTENVTQDNVNLLIGGTDV 244 Query: 227 GDWYSLLAALNHE-----------------QAPARLHWLATLLMDAL--KRHHGAAQVTN 267 Y L L + L + + L K + Sbjct: 245 NVLYELTECLIDGNREKIILKVEELNNFGTDFKRLVGDLINFIRNTLISKITKSFKLYIS 304 Query: 268 VDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ 324 L+ +L S L +L ++ + + S ++ LL++ Sbjct: 305 ESEASLIEKLNKKTSEEHLVVLLKELINSEFAIRSSFF--PRVIFEITLLKLSFLAH 359 >UniRef50_A6LMU3 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LMU3_THEM4 Length = 460 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 120/318 (37%), Gaps = 25/318 (7%) Query: 2 RWYPW-------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQ 54 ++ P + V S + HA + G G + L++ L C+ PQ Sbjct: 7 KYRPKKFLELVGQSHVKKLFVNSLKNKEISHAYIFAGPRGTGKTTVARILAKSLNCENPQ 66 Query: 55 GHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWV 114 + C C C + G D L + G+D +R++ E +N H G KV + Sbjct: 67 EIEPCNMCNACISIDKGNFMDVLEL---DAASNRGIDEIRKIRETVNYHTAQGKYKVYII 123 Query: 115 TDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVT 174 +A +LT A NALLKTLEEPP+ F LAT PE++ T+ SRC++ + + Sbjct: 124 DEAHMLTKEAFNALLKTLEEPPSNVVFILATTNPEKIPQTIISRCQVIDFKNISNKDIIK 183 Query: 175 WLS-----REVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVP 225 L + +S +A++ + + G AL + + + + +P Sbjct: 184 RLEFVCENEGIKISHEAIVEISKRANGGLRDALTILEQVINSAGKDIKIEDVRETLGLIP 243 Query: 226 SGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSR 285 LL L + + L + D + ++ + L + + Sbjct: 244 DTIIEKLLENLENNDIKSTLKLI-----DEVYYSGKNLEIFLYQTIEKLISLVEENNHNY 298 Query: 286 LQAILGDVCHIREQLMSV 303 + L + I + + Sbjct: 299 IH-FLKPISEILKDIKYS 315 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.173 0.575 Lambda K H 0.267 0.0530 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,372,486,285 Number of Sequences: 3077464 Number of extensions: 127968989 Number of successful extensions: 459619 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 3040 Number of HSP's successfully gapped in prelim test: 820 Number of HSP's that attempted gapping in prelim test: 449439 Number of HSP's gapped (non-prelim): 4944 length of query: 334 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 205 effective length of database: 643,403,500 effective search space: 131897717500 effective search space used: 131897717500 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 94 (40.4 bits)