480 c3tmiA_ Probab=90.67   E-value=1  Score=23.76  Aligned_columns=108  Identities=14%

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEE
Q ss_conf             99886637999999999980889807986279789989999999999648788888877853899998556898089983
Q batch____         1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA   80 (334)
Q Consensus         1 ~~~~pw~~~~~~~l~~~i~~~~l~ha~Ll~G~~G~gK~~~a~~la~~l~c~~~~~~~~~~~c~~c~~~~~~~~~d~~~i~   80 (334)
                      .+..|+|.++.+...+       .+-.++..|.|+|||..|...+...+....                           
T Consensus         2 ~~pr~yQ~e~~~~~l~-------g~n~ii~~~TGsGKT~~a~~~i~~~l~~~~---------------------------   47 (670)
T c3tmiA_           2 FKPRNYQLELALPAMK-------GKNTIICAPTGCGKTFVSLLICEHHLKKFP---------------------------   47 (670)
T ss_dssp             CCCCHHHHHTTHHHHT-------TCCEEEECCTTSCHHHHHHHHHHHHHHTSC---------------------------
T ss_pred             CCCCHHHHHHHHHHHC-------CCCEEEECCCCCCHHHHHHHHHHHHHHHCC---------------------------
T ss_conf             7889799999999974-------998999908998658999999999997242---------------------------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCHHHHCCCE
Q ss_conf             12234555289999999997306000781199962700069899998898750589957999973993773312430307
Q batch____        81 PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR  160 (334)
Q Consensus        81 ~~~~~~~i~id~ir~l~~~~~~~~~~~~~ki~iI~~ad~~~~~a~naLLK~LEeP~~~~~~Il~t~~~~~ll~tI~SR~~  160 (334)
                                              .....|++|+-..-.+..+..+.+.+.+..+...+..+.-..........+.+...
T Consensus        48 ------------------------~~~~~k~Lii~Pt~~L~~Q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~  103 (670)
T c3tmiA_          48 ------------------------QGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENND  103 (670)
T ss_dssp             ------------------------TTCCCCEEEECSSHHHHHHHHHHHHHHHTTTTCCEEEECTTTCSSSCHHHHHHTCS
T ss_pred             ------------------------CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCC
T ss_conf             ------------------------35797699982899999999999998447687699998679766788887413898


Q ss_pred             EEEECC
Q ss_conf             888435
Q batch____       161 LHYLAP  166 (334)
Q Consensus       161 ~i~~~~  166 (334)
                      ++-..+
T Consensus       104 iii~T~  109 (670)
T c3tmiA_         104 IIILTP  109 (670)
T ss_dssp             EEEECH
T ss_pred             EEEECH
T ss_conf             999987