123 c1vmaA_ Probab=97.41   E-value=0.0013  Score=43.94  Aligned_columns=123  Identities=19%

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             88980798627978998999999999964878888887785389999855689808998312234555289999999997
Q batch____        21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKL  100 (334)
Q Consensus        21 ~~l~ha~Ll~G~~G~gK~~~a~~la~~l~c~~~~~~~~~~~c~~c~~~~~~~~~d~~~i~~~~~~~~i~id~ir~l~~~~  100 (334)
                      ..-|+.++|.||+|+|||+.+-.+|..+......                     +..+..+..... .+++.+...+.+
T Consensus        89 ~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~---------------------v~li~~D~~R~g-A~eQL~~~a~~~  146 (294)
T c1vmaA_          89 PEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKS---------------------VVLAAADTFRAA-AIEQLKIWGERV  146 (294)
T ss_dssp             SSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCC---------------------EEEEEECTTCHH-HHHHHHHHHHHH
T ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCC---------------------EEEEECCCCCHH-HHHHHHHHHHHH
T ss_conf             7896699998068876024899999999967994---------------------899975876864-799999999761


Q ss_pred             HHCC--------------------CCCCCEEEEECCCCCCCHHHH--HHHHHHHH-------CCCCCEEEEEEECCHHHC
Q ss_conf             3060--------------------007811999627000698999--98898750-------589957999973993773
Q batch____       101 NEHA--------------------RLGGAKVVWVTDAALLTDAAA--NALLKTLE-------EPPAETWFFLATREPERL  151 (334)
Q Consensus       101 ~~~~--------------------~~~~~ki~iI~~ad~~~~~a~--naLLK~LE-------eP~~~~~~Il~t~~~~~l  151 (334)
                      ...-                    ...++-+++||.+-+...+..  ..|.++.+       .+|..+++++.++.-..-
T Consensus       147 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~  226 (294)
T c1vmaA_         147 GATVISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNG  226 (294)
T ss_dssp             TCEEECCSTTCCHHHHHHHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHH
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHH
T ss_conf             98289748836989999999999997799899981888987857999999999999630356688539998114687899


Q ss_pred             CHHHHCCCEEEEEC
Q ss_conf             31243030788843
Q batch____       152 LATLRSRCRLHYLA  165 (334)
Q Consensus       152 l~tI~SR~~~i~~~  165 (334)
                      ...+..+...+.+.
T Consensus       227 ~~~~~~~~~~~~~~  240 (294)
T c1vmaA_         227 LVQAKIFKEAVNVT  240 (294)
T ss_dssp             HHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHCCCCC
T ss_conf             99999996308997