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    Reference sequence (query): batch____
    Identities normalised by aligned length.
    Colored by: property

    HSP processing: ranked
    Search cycle: 3

                                                                                                       1 [        .         .         .         .         :         .         .         .         .    ] 95
        batch____                                              bits   E-value  N 100.0%  1:95            MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVEKVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH
      1 UniRef50_Q97F93        Ribosome-associated protein...   113     2e-24  1  41.1%  1:95    1:95    MKLIVSGKNLEVTEGLREAVEKQISKLEKYFKPEVEAHVTLSVEKNRQIVEVTIPFNGVILRGEETNNDMYASIDIVGDKLERQVRKQKTKLERR
      2 UniRef50_Q0EWV9        Ribosomal subunit interface...   113     2e-24  1  46.3%  1:95  26:120    MQVSITGRHVELTEPMKAYVTDKLQHLKHSFDHVLDVHVVLSVEKFRQRCEVSMQANGINIHGSDETEDMYASIDGVIDKINRQLKRYRSKLHRH
      3 UniRef50_P0A147        Probable sigma(54) modulati...   111     5e-24  1  53.2%  1:94    1:94    MQVNISGQHVEVTQPLRDYVLEKLARVESHFDKITNVQVIMKVEKLQQKVEATLQIPGGEVVANAEHEDMYAAIDALADKLDRQLKKHKEKQQS-
      4 UniRef50_P26983        Probable sigma(54) modulati...   111     5e-24  1  94.7%  1:95    1:95    MQLNITGHNVEITEALREFVTTKFAKLEQYFERINQVYVVLKVEKVTHISDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTRHKDKLKQH
      5 UniRef50_A3EWH8        Sigma 54 modulation protein...   110     2e-23  1  40.9%  1:93    1:93    MQITLTGRHMEITEAIRAKVQEKMELLDRVAPENCRADVILGVEKFRQKVEVTLHANGRLIHAESVTNDLYASLDLAVDKLERQLVRFKEKIR--
      6 UniRef50_Q0B0B5        Sigma 54 modulation protein...   108     7e-23  1  35.9%  1:92    1:92    MKFIIRGRNIEITDALKDYTTKRLSKLEKYIDDVKEAQVALSIEGEDHKVEVTIPLNGIILRGEEMSDDMYSSIDMVEEKLEKQIEKYKTRL---
      7 UniRef50_Q9RVE7        Protein DR_1082 n=3 Tax=Dei...   108     8e-23  1  42.9%  1:91    1:97    MQiqLSGRNVEVTEPMREYVEEKLSRLDRYTDQITDARVTLTVreRRNRVEVQLNVPGGIIRAEEHHADMYAAIDKASDVLERQLRKFKTR----
      8 UniRef50_Q0ADR1        Sigma 54 modulation protein...   107     9e-23  1  49.5%  1:91    1:91    MNLNLTGNHVAITPAMRDYVTSKIERSTRHFDNIMAINVTLSVDKLKQKAEATVHLPGREIFVEADSTDMYASIDSLADKLARQILKHKEK----
      9 UniRef50_B5EEZ7        Sigma 54 modulation protein...   107     1e-22  1  36.8%  1:95    1:95    MQTTVTFRHMEPSDALKSYAEEKLERVKKYIDEPIVVQVFLTVEKIRHMAEVTITAKGITIKAAEETNDMYASIDAVSDKIERQLRRFKERIKAH
     10 UniRef50_Q1DDE8        Ribosomal subunit interface...   107     1e-22  1  35.8%  1:95    1:95    MQFNITFRQFGASDSLKEYAREKVERVNRLLDRAGEAHVVLSLERHLHHADITIHSGAWVLRGRDKSDDMYASIDLAMDKIERQLRRYRDKLKSH
     11 UniRef50_B0TYD3        Sigma54 modulation protein ...   107     1e-22  1  47.9%  1:94    1:94    MNIQITGRHVEVTDAIKNYVNEKIGKVGHYFDNITSTKVILDVEKDHQVAEAIVTVPGSEFVAKAEDKDLYAAIDMLEDKLARQIKKHKNKLRD-
     12 UniRef50_A0LJZ9        Sigma 54 modulation protein...   107     1e-22  1  37.9%  1:95    1:95    MQINVTFRHIEPSDPLRAYAEEKISRVKKYLDEPVDAHVVLKVEKFRHIAEVTIDANGLRINGAEETDDMYSAIDKLADTLEGQVKKGKEKVRRR
     13 UniRef50_B0K3A9        Sigma 54 modulation protein...   106     2e-22  1  34.7%  1:95    1:96    MNITVSGKnmTVTDGLRDAVIKNVSKLSKYFPEDTEVRTVLSVQKNNHIAEITIPFKGIIFRAEEVSDDMYVSIDRVVDKIEKQILKHKAKLKNR
     14 UniRef50_C1SGY6        SSU ribosomal protein S30P ...   106     2e-22  1  36.5%  1:85    1:85    MNIQITARNIELTDAIRDYAEKKVSKLEKYFDYITDANVLLEVQKNVHIVEVLVSAKGVFMKGLEKSEDLYASIDLAVDKIEKQL----------
     15 UniRef50_C1I442        30S ribosomal protein S30AE...   106     2e-22  1  31.6%  1:95    1:95    MRVSVIAKNTTATPALKEMIEKKLSKVKRYFDPEVEAKTTLSVQKNKQKVEITIPFNGIILRAEESTEDMYKSIDLVVAKLERQIRKQRTKLSRR
     16 UniRef50_Q2RLX7        Sigma 54 modulation protein...   106     2e-22  1  31.9%  1:94  16:109    MELIIRGKNLPVTDALRQYIAKRLGKIERYLDGVDEIQVNLAVTRDKHVVEVTIPLNGYILRGEEATGDMYGSVDLVVEKLEKQIAKYKTRLNK-
     17 UniRef50_Q0A6G4        Sigma 54 modulation protein...   106     3e-22  1  48.4%  1:95    1:95    MQIQITGHHVDVTDALKAYVREKFQRLERHFDNVVDSHVILSVEKLRQKAEANLLISGNRLHAETTDEDMYAAIDGMIDKLDRQLVKHKEKVTDH
     18 UniRef50_B8CYM6        Sigma 54 modulation protein...   105     3e-22  1  37.2%  1:94    1:95    MKITTYGKNIDVTPALKEYAIEKVSKLGKYFdePQEAHISMEVEKGRHIVEVTAYLNGLILRGEEESQDMYASIDGVLEKLERQVHKYKTKINR-
     19 UniRef50_A7HIE3        Sigma 54 modulation protein...   105     4e-22  1  40.0%  1:95    1:95    MQVNITFRHLEPTEALKSHVKGRVEHVQRYIDRPSEAHAVLHVENLDHHAEITVKAGRFLLRGTARSADMYASIDQAADKIERQLKKHKEKLTNH
     20 UniRef50_Q7W3J9        Probable sigma(54) modulati...   104     1e-21  1  41.1%  1:95    1:95    MNLSICGRHLDVTPAIREYVMNKLARVLRHFDHVIDTQVMLSVEPLRHKAEITMRLRGKDIHCEAVDENLYAAIDLLVDKIDRQVIKHKDKVQSH
     21 UniRef50_A1RNM6        SSU ribosomal protein S30P ...   103     2e-21  1  52.6%  1:95    1:95    MQIKLIGHHIEITESLRAYVEEKFSKLERHFEQIHNVHVVLNVEKMQQIAEARINLTGGEVFATSEHTDMYAAIDVLIDKLDRQVIKHKEKLTKH
     22 UniRef50_D1V7P2        Sigma 54 modulation protein...   102     3e-21  1  31.6%  1:95   1:101    MDIVVKGRHTAVPERFRSHVETKLAKLERYDGKVIRVDVELSREPNKrrVELTVYTRGPVIRAEAAAADPYSALDGAAGKLAERLRRASERRTDH
     23 UniRef50_C9XLM7        Putative sigma 54 modulatio...   102     4e-21  1  34.0%  1:94    1:95    MQIIVSGRQMKLTDGIKGYVDGKLSRLEKYLDPESEVKVTVSAKKDRQKVEVtiPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKD-
     24 UniRef50_D1VUS0        Ribosome-associated factor ...   101     5e-21  1  32.6%  1:95    1:95    MLLELVGKNIDLKDGLKNQAQKKFSKLDKYFAEEVQARAVFSKQKNGQKVEVTIFLPGTILRAEETSQDMFVSIDKTVDKLERQVRKYKTRLKKR
     25 UniRef50_D2RIZ4        Ribosomal subunit interface...   101     7e-21  1  30.5%  1:95    1:95    MAVKVRGKNIEVTQALKDYVEKRVQTITKQFKTVGEITAVMRVEKGNHTVEITVPASGIVLRAQETSDNMYASIDQCVEKIERQIHKYKTRLMKR
     26 UniRef50_Q71WR7        Ribosomal subunit interface...   101     8e-21  1  35.5%  2:94    3:98    -KYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNldKNA-KVEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNR-
     27 UniRef50_C9KNJ3        Ribosomal subunit interface...   101     8e-21  1  36.6%  3:95    4:97    --FTVRGKNIEITPSLREYVEKRVGKVTKYFDSVGDIKVLLTVSKGRHIVEVTVPIPGGilRGEESTMDMYTSIDLVVEKLERQIHKQKTKLARR
     28 UniRef50_C0WCZ2        Sigma-54 modulation protein...   100     1e-20  1  28.4%  1:95    1:95    MTVRVRGKNLEVTPALKDYVEKKVETITKQFKTVGEITAVMRIERNKHIVEITVPASGIVLRAQEGSENMYASIDNCVEKIERQIHKYKTRLMKR
     29 UniRef50_B5YI17        SSU ribosomal protein S30P ...   100     1e-20  1  33.0%  1:94    1:94    MKITIRGKNIDVTEALKQYIEKRVTKFERFLTDTSEAIVTISTEKFTHKIDVLLKVDGHLIQAEGKTEDLYSAVDQVVEKLEKQVLKYKEKVQN-
     30 UniRef50_P28613        Probable sigma(54) modulati...   100     2e-20  1  37.9%  1:95   1:100    MNFKISGHHLDITPPLREYVETKLERIVRHFDQVIGVSVLLSVDNhrQYAEINLHLKGKDIFVEAHHEDLYAAIDALVDKLDRQVIRYKDRVQGH
     31 UniRef50_B0VJD6        Ribosome-associated, sigma ...   100     2e-20  1  35.8%  1:95    1:95    MQITITARHFELTKAIRDYVETACSKLNKYFDQIITMHAVLALENSRNICELSLHAAKFSLQSEAEEMDMYLAIDNAVEKMEGQIKKLKDRITDH
     32 UniRef50_C8WT44        Sigma 54 modulation protein...   100     2e-20  1  38.9%  1:95    1:97    MKAQVHGDNIAVTAALQDYVDKKIARLTRYFDREAdiYVTMAVEGLDHRVEMTVFVNGVIFRAEEKSPDMYASIDLATDKLEEQIHRYKEKLNRR
     33 UniRef50_B5JSL3        Ribosomal subunit interface...   100     2e-20  1  51.6%  1:95    1:97    MHINLTGHHLDLTDALRDYVNDKFTRLERHFDHVTQIHVILGPEKHQHKAEAKMHVPhgELFAHAEHEDMYAAIDGLVDKLDRQLLKHKEKLTDH
     34 UniRef50_A8TSN7        Sigma 54 modulation protein...   100     2e-20  1  22.1%  1:95  10:106    MKISVQGKQLDVGDTLRQRIESTIESItkYFANPIEATVTLSRQGSEFRADVGVHikGISVQAEGRNDDAYAAFGSAAERIEKQLRRYKRRLRDH
     35 UniRef50_C0QJ65        SmpA n=1 Tax=Desulfobacteri...    99     3e-20  1  35.8%  1:95    1:95    MQTSVTFKQIDPSDALKSYVQKKVDRFDKMLESPAEANVVLSVEKIRHIAEITLVCDRLKIHAKEESENMYSSIDTLMDKVAGQIKKNKDKMRRH
     36 UniRef50_D0LNA7        Sigma 54 modulation protein...    99     5e-20  1  31.6%  1:95    1:97    MQFSVTFRQTEATEALKEYARDRMERIKKYFPDPISVHVVMSTERgkHRVDVTMQlnGLTVAGRETSESMHSSIDLVTAKIERQVRRYKDKLRTH
     37 UniRef50_P0AD51        Ribosome-associated inhibit...    99     5e-20  1  39.6%  1:91    1:91    MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHK----
     38 UniRef50_A4FNI8        S30AE family protein n=1 Ta...    98     6e-20  1  31.6%  1:95   1:101    MDIVVKGRNVEVPDHYRQHVDEKLTRLERYSKKTIRADVELFHERNpqRVEITLKGKGTPVRAEAAAGDFYAALDAATTKLEGRLRRMCDRRKVH
     39 UniRef50_Q6MED7        Putative uncharacterized pr...    98     6e-20  1  34.0%  2:95  16:109    -NVKITGRHVEITDSMKSYAMEKISKIERFMDRIIDVNVIMDIQKIDHKVEIILKAGHTKIQSQAATPDMYASIDKAIARLEAQIRRYKSKIQDH
     40 UniRef50_Q5SIS0        Ribosomal subunit interface...    97     2e-19  1  31.5%  1:92    1:98    MNikLIGRNLEITDAIRDYVEKKLARLDRYQDGELMAKVVLSLAGSPhrAEIQVDLPGGLVRVEEEDADLYAAIDRAVDRLETQVKRFRERR---
     41 UniRef50_Q122P6        Sigma 54 modulation protein...    97     2e-19  1  38.9%  1:95   1:100    MNLTISGHHLEVTPALRGYVTSKLDRITRHFDQVVDVKVLLTVDnrRQRAECNVHVKGRDLFAESSHADLYAAVDELTDKLDRQVGRYKTKTKDH
     42 UniRef50_B1LBB6        Sigma 54 modulation protein...    97     2e-19  1  27.4%  1:95    1:98    MEYRITGKGVEISEAIKNYLEKRLDKIDryDDDLVSFNVRIEKdkNQYVVKFNMNLKGNIINVEERHPDIYTAIDFASDALEKQVKRLKERLKNH
     43 UniRef50_P71346        Ribosome-associated inhibit...    97     2e-19  1  33.7%  1:95    1:95    MTLNITSKQMDITPAIREHLEERLAKLGKWQTQLISPHFVLNKVPNGFSVEASIGTPLGNLLASATSDDMYKAINEVEEKLERQLNKLQHKSESR
     44 UniRef50_Q0BX30        Putative uncharacterized pr...    96     3e-19  1  27.4%  1:95    1:97    MQIQITGRHMELGEALRGRIEEGLEavSKYFSRTGDANVFVSQQGPFVEVDCNVHLpgIVLQSSGKANDPYAALEVSLEKMEKRVRRYKRRLKDH
     45 UniRef50_B4RCJ5        Ribosomal subunit interface...    96     3e-19  1  28.4%  1:95  13:109    MEVQVTGKHVDVGEALRSRVADELSaiEKYFDRGGGADVVVSREGNAFKVDCAVTLagQQLTTHGVGGDAHMAFDVALQKMDKRIRRYKRRLKDH
     46 UniRef50_C6M3U2        Ribosomal subunit interface...    96     4e-19  1  41.8%  1:91    1:91    MNLKITGLNFDVTEAIKNYVSEKLERINRHAANAISVTITLSVEKLNQQAEADIHLAGKDLHVEAVEQDMYAAIDVLMDKLDRAVLKHKEK----
     47 UniRef50_D1R7C2        Putative uncharacterized pr...    96     4e-19  1  34.0%  2:95  16:109    -NITVTGRHVLVTEAMKNYAIEKVSKIDRLSHRIIDVIITMDIQKLEHRVDIVLKVDHIKIKSHAVCDDMYVSIDKAVDKLERQLLKYKSRIRDH
     48 UniRef50_Q0ATI7        Sigma 54 modulation protein...    96     4e-19  1  25.3%  1:95    1:97    MHIQVVSKGIDVSGALREQILGRVEdvAKYFNRPGEAYVSISREGTGFRVECSVHLpgVMLQAHGEADDAYKAAENTMERLEKRLRRYKRKLKNH
     49 UniRef50_A7BEC8        Putative uncharacterized pr...    96     4e-19  1  32.6%  1:95   1:101    MDITVVARNAEIHPNFREYVEEKVSKITQFYPRAQRVDVELTHERNPrrIELTVYGKGPIIRAEAQSADRYAAVDIAAGKLYERLRRLRDRVKDH
     50 UniRef50_C7N909        Sigma 54 modulation protein...    96     4e-19  1  36.8%  1:95   1:100    MKIIISGKQLKITDAIKNYTEEKISRISKYSDAITEIDVVLTVegPVHKADGLVFASGTKIKIEAENKDLYAAIDDLSDRLERQVRKYKERQKDH
     51 UniRef50_P47908        Light repressed protein A n...    95     4e-19  1  38.5%  1:91    1:97    MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTftKVDVHLSVANnkHKAEVTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEK----
     52 UniRef50_UPI0000E87FF9 Possible Sigma 54 modulatio...    95     5e-19  1  42.1%  1:95    1:95    MNIIITGHHIKITPAIENYITSKFHKIESHFSQLINVKFTLSVEKNMHVAESTLHLPQQDIHAQANDTDMYHAIEMLIKKLDIQVIKYKEKHTNH
     53 UniRef50_B5Y948        Ribosomal subunit interface...    95     6e-19  1  36.3%  2:92   8:102    -KIDMVGKNIELTAAIKQYIEEKIGRVYRYFDPILGVKVVVEKERQafDVEVTLDANGRLIRAEVEDPDLYAAIDKAADKLESNIKRFKEKL---
     54 UniRef50_Q28VX1        Sigma 54 modulation protein...    95     6e-19  1  29.5%  1:95  45:141    MRYQISGKQIEIGQALQTHVQDNLGGiqKYAERPTDATVVFSKSGPEFACETTVHLsgLTASAKAHAHEIYAAFEATADKLEKQLRRYKRRLKDH
     55 UniRef50_A5EVC1        Sigma-54 modulation protein...    95     7e-19  1  40.0%  1:95    1:96    MQFNITGRHLDISPALREHIEKMLNRLEQTYQNITSAQVTLRIVKHEKIAETTLSiaSNDIHAEGRHEDMYAAIDLLAEKLEKQLQRQKEKLEER
     56 UniRef50_Q2LSN2        Ribosome-associated factor ...    95     7e-19  1  32.6%  1:95  31:125    MKISVTFRNTEEEGWQTQYVEDRVKRLNKYIDAPADVHVVLTVEKFRNVAEISVMTNGLNLIGKEESKDMHLAIDNAVEKIERQLKKHKEKIRGY
     57 UniRef50_Q8DKM6        LrtA protein n=7 Tax=Cyanob...    95     8e-19  1  35.1%  1:94   1:100    MRLVIHGKNIDITDGIRSYLNQKIERATSHFQNVieVDVHLSVARNrqTAEVTVFVNGSVIRAEESSENLYASIDLVADKIARKLRKLKEKRQD-
     58 UniRef50_C9XIR4        Putative RNA-binding protei...    95     9e-19  1  33.0%  1:94    1:95    MNIIISGKQIELTDAIKNKIETKLSKLDNYIHPDTDVKVTVSARKARQKIEVTitVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQD-
     59 UniRef50_A2C0K6        Light repressed protein A-l...    95     1e-18  1  34.7%  1:95   1:100    MKLLIHGRNLELTPSLRDYTKTKIDKAThfQEMVQEADVHLSVARNpqTAEVTVFANGTVIRAQERSENLYASIDLVANKLARQLRKYKERHNSH
     60 UniRef50_A9BRS9        Sigma 54 modulation protein...    93     2e-18  1  34.0%  1:94    1:99    MNLTISGHHLEVTPSLRSYVMAKLERILRHFDQVVDVKVLLTVHnkRQRAGCTLRVKGQDLFVETSHFDLYAAVDALADKLDRVVVRYKTRQQG-
     61 UniRef50_C8P3U4        Ribosomal subunit interface...    93     3e-18  1  34.0%  1:94    1:96    MLVYIHGKNVEITDAMQEKVEEKLEFLHKYfdDSWRANVVVNVYPQGSKVEVTITSKIGPLRAEVLHEDFYAALDRVVDKLEDQIRRHKTKISR-
     62 UniRef50_C3WBJ3        Sigma(54) modulation protei...    93     3e-18  1  35.1%  1:94    1:98    MKMTIHGKQLVITDAIKNYAETKLGRVEKYHDGIIELAINLskTGNYHTAEVLAYLGGSTVKASCTDADLYAAIDGVSDVLEGQLKKHKDKIRT-
     63 UniRef50_B5YF17        Ribosomal subunit interface...    92     4e-18  1  35.1%  1:94    1:99    MQINYVSKNVNITDNLQQYAEKKLSRLSRFFDNIENIEVLFSEesKRHRVEVTIKANGRIIKASEANQDFRTSIDLVVDKLETQLKRLKEKLVD-
     64 UniRef50_A5WCB7        Sigma 54 modulation protein...    92     4e-18  1  35.1%  1:94   1:104    MNISITGHHITITDAMKDMVMDKLSKVERHFDQIQSIKVILSLdkNNHKAEALMRVAGQEMFVQSYDDDMYKAIHEMADKLDRQVRKYKTRIDR-
     65 UniRef50_A5CWW3        Sigma-54 modulation protein...    92     4e-18  1  38.9%  1:95    1:95    MQLNISGHHLDITEAIKQHSLTKLNKIKNHFNQVININMILEVKKDVQKAEAIIHVSGADLFAKAESFDMYNSIDQMVNKLDVQIRKHKEKLNNH
     66 UniRef50_A1SRN9        Sigma 54 modulation protein...    92     5e-18  1  35.2%  1:91    1:91    MRIEITSKQITITDTMRTKVEERFEKLEKLQIPLITPHVIITKEPKGVKIEATINVPNDKIFAHAQNDDLYVAIGQLFQKLERQLTKYLHK----
     67 UniRef50_B9Y7S1        Putative uncharacterized pr...    92     5e-18  1  33.7%  1:95    1:97    MKFEIVGKNVSITEAMRQKIERKLSFLDKYldPETRARVVVRTYPLTQKIEVTIPTKVGILRTEVEHEDLYAAIDLAIDKLEDQVRRQKTRLSRR
     68 UniRef50_Q4L4H7        Uncharacterized protein SH2...    92     8e-18  1  30.1%  2:94    3:98    -RFEIHGDNLTITDAIRNYIEDKIGKLERYFNDVPNAVAHVKvqNSTTKIEVTIPLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNR-
     69 UniRef50_UPI0001BCF930 sigma 54 modulation protein...    91     9e-18  1  33.0%  1:91  36:126    MSLNISSKQMDITPAIRTHIEERLAKLEKYHTQLINPHFMLIKQPNSFQVEATIGTPLGDLVAKAEHEDLYTAIFDVKKKLEGRLIKLKEK----
     70 UniRef50_C8WMZ8        Sigma 54 modulation protein...    91     1e-17  1  33.7%  1:95   1:101    MSITVTGRKMPVTDALREYAEEKIGNSMKVMddPLVAEIVLFVEKNPavCEVTLRTKGHIIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVDR
     71 UniRef50_Q5XAQ7        Ribosome-associated factor ...    91     1e-17  1  35.2%  2:92    3:96    -KFSIRGENIEVTEAIRDYVESKLTKIEKYfdQEIDARVNLKVYRERskVEVTIPLDSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKI---
     72 UniRef50_A1T5Y3        Sigma 54 modulation protein...    91     1e-17  1  29.8%  2:95  48:147    -EVAVTGRNVEVPDHFRSYVAEKLSRLERFDRTLYLFDVELYHEKNrqHVEITAKGRGPVVRGEACADSFYAALESAVSKLEGRLRKSKDRRKIH
     73 UniRef50_D2BPB3        Ribosome-associated factor ...    91     1e-17  1  37.6%  2:94    3:98    -KFNIRGENVEVTDAIRAYVEDKIGKLDKYFNdeVTAYVNLKVYSEKrkVEVTLPAKNVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNR-
     74 UniRef50_B0U6N0        Sigma-54 modulation protein...    90     2e-17  1  36.8%  1:95    1:95    MHIETYGQQIEVTPALREYVETKLKRLQRHFSHHCEIRTQLSMSKIDHHVTATINIPGRTLNANASASTMYAAIDLVADKLDRLILKHKEKKCDH
     75 UniRef50_B6BVF2        Ribosomal subunit interface...    90     2e-17  1  44.2%  1:95    1:95    MDITITGQNIEITEALESLIHEKFNKITRHFENITDVKFILKTENHNHIAECKLHLMHSEIFSDASGSDMYKVIDDLIHKIDRQVIKIKEKTKDH
     76 UniRef50_C2BSF1        Possible ribosome-associate...    90     2e-17  1  33.7%  1:95  13:113    MEITVKARNAEIHPDFREYIEEKIAKVEQLAPRTQRVDVELTHEKNPrrIELTVLGKGPVVRAEASSSDRYAAVDIAAGKLFERLRRARDRAKDH
     77 UniRef50_A9G806        Probable sigma(54) modulati...    90     3e-17  1  35.6%  1:90    1:90    MNITITFRHMVGTDAVKNYAHEKVAKLQKFLRQAMTAQVTLSVEGLTHVADVRLSSGSLAFHATERGEDMYASIDMVHDKLERQIRDGKG-----
     78 UniRef50_Q1AVJ5        Sigma 54 modulation protein...    90     3e-17  1  28.4%  1:95   1:103    MEIVVKGRNIPVTDSLERYAVEKVERVRKFFDdvARAEVELIHERNPSIaeTTLFINGAVLKAREASEDMYASIDRMSDKLERQVKRYRGRQVDR
     79 UniRef50_A5TX76        Ribosome-associated protein...    89     3e-17  1  29.8%  1:94    1:98    MKLSIHGRKITLTDAIRKYAEEKISKVEKFNDSIIKIDATLakTGNAHVTEILAYLSGSTLKATATETDLYASIDKAVDIMEGLLKKHKEKRSR-
     80 UniRef50_C4K0H4        Ribosome-associated factor ...    89     4e-17  1  24.2%  1:95    1:99    MIISVSGQHISIGNNLQEYSKERATQvkKYFTDIINIDIHFSKEGINFKCDIIVKykHNIVKSNDSCSDIYVAFDKAMSKLEKQLRKYKSKFKNH
     81 UniRef50_B4D5R5        Sigma 54 modulation protein...    89     5e-17  1  35.5%  3:95  10:104    --VKVTGRHVSVTDPIKDYATSRVEHLHLDYPRIIEAHVILDVEKHRHFAEIILhtNHITIEASHETDDMYASIDGVAAKIAQQMRKYKTklRNH
     82 UniRef50_A1SVN1        SSU ribosomal protein S30P ...    89     5e-17  1  28.0%  1:93    1:93    MKINISGHHVDVTDSIKEHLEEKFAKIATHFPTLISLDIIISKEHGEFDVEISTNYEGTSIAAKGNDYVMYPAIASAAKKLETVLKHRKGQLK--
     83 UniRef50_A7VDW4        Putative uncharacterized pr...    89     5e-17  1  34.1% 10:94    5:89    ---------IDVTEGLKNAVYDKLSKLEKYFAEDAVAQVTFSVEKDRQKIEVTIPMKGHIIRAEQVSDDMYVSIDLVLEVIERQVNRHKKKLID-
     84 UniRef50_A3QBU6        Sigma 54 modulation protein...    89     5e-17  1  27.0%  3:91    2:90    --IKITSKDFEVTTPIRERIESRLEKLSRHDVQLINPHVIIGQEKQGFKIEASVGIPSNTLFAQAKDKDLYAAINAMGQKLEKQLNRLSHK----
     85 UniRef50_Q07UJ4        Sigma 54 modulation protein...    88     7e-17  1  24.2%  1:95    1:97    MTIRVSGKSISVGDALRARVNERTDelRKYFDGQYSGHITLSKDGFGFRTDCALHLdgITLEAESNAADAYASADQALLQIEKRLRRYKSKLKDR
     86 UniRef50_Q310S7        SSU ribosomal protein S30P ...    88     8e-17  1  31.2%  1:93  11:105    MNIAFTFKNFEPSDHLKKYANRRFEKLGRFLNKslELQVLLSVDKFRHKAEVQCTGEGLNLSAVEQSEDMYATIDLVLDKLEAQVKKHAEKTK--
     87 UniRef50_B0S0M8        30S ribosomal protein S30AE...    88     8e-17  1  34.7%  1:95    1:96    MKLNYVTKDIKLTDDLKQMAESKLHKLDKYFHDEQQARVVFKKEKDKARVEVTMIlkGVVLRAEESNEDIKTAIDKVEDALARQVRKHKTKLQKR
     88 UniRef50_B2KAZ3        Sigma 54 modulation protein...    88     8e-17  1  30.5%  1:95    1:97    MEIQITAKNIKLTPAIKDFAQTRLDKMEKYVDQVVWAQIFLSVDKknQKAQIIVHvnKNTVDATAIESDLYKAIDAAAFKAEAQLKKIKEKTKSR
     89 UniRef50_Q49VV1        Uncharacterized protein SSP...    88     8e-17  1  30.3%  2:90    3:94    -RFEIHGENLTITDAIRNYIEEKIGKLERYFNDVPNATAHVKvqNSATKIEVTIPLKKVTLRAEERNDDLYAGIDLINNKLERQVRKYKT-----
     90 UniRef50_D0XRD3        Sigma 54 modulation protein...    88     1e-16  1  24.2%  1:95  19:116    MQVQVSGKHVDVGEALGSRISQELQevGKYFERGGeaEVVVSKDGYGFKVDCWVRLagQALVTTGLGGDAHAAFTDSLEKLEKRVRRYKRRLKDH
     91 UniRef50_A9WMP6        Ribosome-associated factor ...    88     1e-16  1  30.5%  1:95  26:126    MEFMISGRNLTVSDRFREYATEKISKLEHLTEKVQRVDAKVSKQPNArtVELTVQGRGPVIRAEAHAGDKFAAFDVAYNKLLERLRRAKDKKKLH
     92 UniRef50_C6QEK7        Sigma 54 modulation protein...    87     2e-16  1  25.3%  1:95    1:97    MTIQITGKNLDAGNAFQAYASDKIHtlNKYLDRVPDGHVRLERERGFFKTSCSVRlsGLLLEAHGEGDDAYTSVDSAAHRLESRVRRYKSRIKNH
     93 UniRef50_B8LMC5        Putative uncharacterized pr...    87     2e-16  1  27.7%  2:95  89:191    -RLIIQGKNFQLTDAVKAYIEEKVgaVQKHANLVREVDVRLSIRGGerRCEVTLFTkhGVVRAEEEAETIYASIDIVSDIIRRKLRKIKEKDGGH
     94 UniRef50_A1SGL6        Sigma 54 modulation protein...    87     2e-16  1  35.6%  1:90    1:96    MEVVVTGRNCELTDRFRSHVEEKLGKLEKHDHRIIRVNVEVKCERNPRQADRAVRlkGPVIRAEAMAADKMAALDLALDKMAAQMRRASD-----
     95 UniRef50_Q9ZD30        PROBABLE SIGMA(54) MODULATI...    87     2e-16  1  25.3%  1:95    1:99    MIISVSGQHISIGSNLQEYSKEKITqiKKYLTDIINIDIHFSKEGINFKCDIIVKykHNIIKSNDSCSDIYLAFDKAMSKLEKQLRKCKSKFKNH
     96 UniRef50_D1BCP0        Ribosomal subunit interface...    87     2e-16  1  25.3%  1:95   1:101    MEIVVVGRHTEVADRFRRHAEDKLAKIEQLAPSAQRVDVEVTHENNPrrVELTVRDKGPVVRAEAAADDRFGALDLAMNKLTERLRRANDRRKNR
     97 UniRef50_A9NEZ2        Ribosome-associated protein...    87     3e-16  1  33.7%  1:95    1:98    MRYEIIGKnfVATDAIKAYVVKKLDKIVNMFDviDTVRVVLRVYKEYSKVEVTIPAPYIILRSEVRDPDMYAAIDKSVDKLTAQIRRHKSKIRHH
     98 UniRef50_A9KDT2        Ribosome-associated factor ...    87     3e-16  1  34.7%  1:95    1:95    MHIQMTGQGVDISPALRELTEKKLHRIQPCRDEISNIHIIFHINKLKKIVDANVKLPGSTINAQAESDDMYKTVDLLMHKLETQLSKYKAKKGDH
     99 UniRef50_P30334        Probable sigma(54) modulati...    86     3e-16  1  27.4%  1:95    1:97    MTLRISGKSVSVGEALRGRVSDRTEelRKYFDGNYSGHITLSKDGFGFRTDCALHLdgITLEADSNAPDAYASADQALVMIEKRLKRYKSRLKDR
    100 UniRef50_P17265        Probable sigma(54) modulati...    86     3e-16  1  22.1%  1:95    1:97    MSVRVSGKHMEIGDSFRVRIGEQIEqvTKYFDGGYSSQVTVEKSGSRFSADCKLHLdgVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDH
    101 UniRef50_B0MPR7        Putative uncharacterized pr...    86     3e-16  1  26.6%  1:94  38:132    MTVNITAKKIQVTQAFSDYATKKIekLDRFFSGDADCKVTLSEQKNMITCEVTVRTAGLIFRSEQKAADKNDAFDACIDRIIRQIRKNKTRVEK-
    102 UniRef50_A8RDK2        Putative uncharacterized pr...    86     3e-16  1  31.9%  1:94    1:96    MKVNIYGKNITVTPALSEKIEKKLNHLEKYfdDSVVANVVVRVYPNKQKIEVTIPTKYAVLRTEVVHDDLYAAIDLAIDKLEDQIRRQKTRLTR-
    103 UniRef50_Q21ND3        SSU ribosomal protein S30P ...    86     4e-16  1  33.3%  1:90    1:90    MQINLSGHHVELTDAIRNIANEKFQKIASHYPHLDSVDVYLTVEKHEQKVEATTQYRGATLAVQSSKTDLYAAIGDSVRKLESALSHRKG-----
    104 UniRef50_D1B9M7        Sigma 54 modulation protein...    86     4e-16  1  25.3%  1:95    1:95    MDVRFVARNVELQNSVKDLMEKKLGKLERFFDRILDTQVAVDFKRGMYVVEITSNINGMVMRGEDYAPDLRKAFEKSLKNIERQVKRHKDMLVDR
    105 UniRef50_A9TA00        Predicted protein n=2 Tax=P...    86     4e-16  1  29.8%  2:95  89:191    -RLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALveVDVRMSVRGGeqRCEVTLFTkhGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGH
    106 UniRef50_D2LB60        Sigma 54 modulation protein...    86     4e-16  1  23.2%  1:95    1:97    MTIKVTGKNIDLGESLREYALNRVeaLDKYSGRSVSGQISVEKNTDGFFSHCAIHLegLDLQSTGTGVDGYASVDSAMERLEKRLRRYKRRIDDH
    107 UniRef50_C1EFG3        Predicted protein n=2 Tax=M...    86     4e-16  1  31.1%  2:91  81:181    -KVIVQGRHLEITDSIREYAEEKINKAVAHFddVREVDVRCSSRGGaqKTEVTVYTRNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEK----
    108 UniRef50_A6W0C2        Sigma 54 modulation protein...    86     4e-16  1  34.4%  4:93    5:95    ---KISGHHIDVTPAIKDHINEKLSKVAKLTDQITSVNVTLLKDSKSQKAEARVHIPGKEIFASASSEdlFHAIDDMVDKLAKQIDKHKTKQS--
    109 UniRef50_Q6MPK4        Ribosome-associated protein...    86     4e-16  1  23.2%  1:95    1:95    MKLNYTFKHLDHSESLETYTEERMAEVGRFLLREGYGNVYFSKVKNEFCVEISVNTREKYFKATAYGPDVYGAVDACAEKMEKQFLKTNKQYKDH
    110 UniRef50_A6G444        Sigma 54 modulation protein...    86     5e-16  1  30.2% 10:95    1:87    ---------MESSDALRNYAEDRLAKIKRYFSDPLKVNCTFSVEKINHIAQFDVTlnGLQLHSSEKTESMYSSIDMALAKMERQVRRYKDRITNH
    111 UniRef50_C9M512        Ribosomal subunit interface...    85     5e-16  1  25.3%  1:95  16:111    MDIRFTTHNAKIPAEMKEYMEGKLGRMEKFFSRILDMQVAVKTDKKDFvvEITADANGVVLRGEQRDPDLRKAFDLALKVLERRIRRHKEYLIDR
    112 UniRef50_D1N462        Sigma 54 modulation protein...    85     7e-16  1  23.2%  1:95    1:96    MKISVTGRQFEITPSIREYVESRIQAleDKALDFSSAKVVMDYQKNSFKTTLVVNCKYHVVPAEVEDFDLYKSFDACVAKVDTQLKTIREKIRSH
    113 UniRef50_C7MXY7        SSU ribosomal protein S30P/...    85     7e-16  1  34.1%  1:82    1:88    MDIVIKGRNVEVPEHYRNHVAGKMARLERYDRKVISYDVELYHEPNpqRVEITGKGKGPVVRAEARAGDFYTALDSAIRKLE-------------
    114 UniRef50_A7HPI1        Sigma 54 modulation protein...    85     1e-15  1  24.4%  1:82    1:84    MQVQVSGHHLDVGDALRTHATERLeaVTKYFDRPVDGQVTLTKQGHEFRADCSAHlsGLRVNAQGTANEVYASFEAALERLE-------------
    115 UniRef50_A7NNI5        Sigma 54 modulation protein...    85     1e-15  1  30.4%  1:92   6:103    MNLIVNSRNGKLSDRQRQHIEQKLSRLDRYLDRIDKVTvmRRNEGNVHRVQVTVVGDHGVlrAERRAPELYAAIDEVYDTLQRQIERYKDKH---
    116 UniRef50_C4LBF7        Sigma 54 modulation protein...    84     1e-15  1  30.5%  1:95    1:95    MLIEITSKIIDVTPSIREYVVSKFEKLERMQVPMISPHVYVGKEGERYVIEAKIQIPFGKLFAEAEHEDLHAAINALEQKLERQIIRHIHRPDAR
    117 UniRef50_C9RQK5        Sigma 54 modulation protein...    84     1e-15  1  22.1%  1:95    1:96    MDIQFSARHFNASAGLQDRIQEEMDKLAKFYPNITSASVILDHeeHQRHCEISVNITGSVIVASADEENMGKAVDVTLERIKVQLKKANDKQNDH
    118 UniRef50_P19954        30S ribosomal protein 1, ch...    84     1e-15  1  26.6%  2:95  76:178    -KLILQGRNLEVSDNVRSHVEDKVGkvAKHSHLVREVDVRLSARGGdrRCEVTLFTkhGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDH
    119 UniRef50_C7QBC3        Sigma 54 modulation protein...    84     1e-15  1  32.6%  1:95   1:102    MDIVVKSRHHEVTDRFRRHVVEKLAKVEEMDGKAISLTVVLGEEKNPrrIELTLDCpsPVIRAEACAGDPYSALDLAAAKLQAQLRRVKDRRKIH
    120 UniRef50_A8ZTQ1        Sigma 54 modulation protein...    84     2e-15  1  36.6%  1:82    1:82    MQVTVTFKNLEASEHLKQFVSEKLNKFDRLFDSPAKAEVLLSVEKFRNIAEINLTGDKLNIIGKEETEDMYAAIDLVMDKIE-------------
    121 UniRef50_P24694        Probable sigma(54) modulati...    84     2e-15  1  34.7%  1:75    1:78    MQITITGQHLDLTDSIKNYADEKIGRLGRYFDHVSNAQVVLkhEKLSNVVDITVNAPGHVFHAEVHDADMYTGID--------------------
    122 UniRef50_C7HV18        Ribosomal subunit interface...    83     2e-15  1  31.9%  1:94    1:95    MKLNIKGKNINVYESLKEEAKEKFDRLDKYFNKEEEMDLKFSTEGNLKKVESTIFLKGGTirAEEVNDNFSTGIDKVIDALVRQIRKQKTKLQR-
    123 UniRef50_Q3SIX5        Possible Sigma 54 modulatio...    83     2e-15  1  29.3%  3:94   5:103    --LQITFRDIEPSEALEAHIREKADKLETFFQPIMSCRVVlkHQGKVFKLRIDIGVPGSEIVVndAHEDVYVALRDAFDAARRQLDDYSRRLRR-
    124 UniRef50_Q6AGI3        Sigma-54 modulation protein...    83     2e-15  1  28.4%  1:95   1:102    MDINIVGRNLGITDRFREYAAEKSEKVAHLAERAISFEIKVSrqNGDDRVELTLVGPRATVRSEATGTDKYAAFDIALGKLLERVRRAKDRRKVH
    125 UniRef50_C8NLT0        S30AE family protein n=21 T...    83     2e-15  1  31.5%  2:93  25:122    -QVSITGRNVEVPEHFAERVHKKLAKIERLDPTLTFFHVELQHEPNPRRAdiTATGKGHIARAEAKEDSFYAALETALAKMERSLRKVKARRS--
    126 UniRef50_A0M3Z9        Sigma-54 modulation protein...    83     2e-15  1  31.6%  1:95    1:99    MKMNLQSVNFNADQKLIDFTQKKLDKLDTYFDKIIHADVYFKVqkENKITEILLSVPGGDIMVKKTCNKFEACVDECVSSLQRQLIKRKEKMSAH
    127 UniRef50_A8IJQ7        Sigma 54 modulation protein...    83     2e-15  1  25.3%  1:95    1:97    MALRVSGKNMDVGEALRQRFSDRVSEvgKYFDGGWSGHATVCREGSGYRSELLLHLdgTNLQAHGNAQEPNACADAAMEKIEKRLRRYKQRLKGR
    128 UniRef50_D2EW39        Ribosomal subunit interface...    83     2e-15  1  31.9%  1:94    1:98    MEVRIQSIHFDASEQLQSFVQKKVAKLEKFYDDIKKVEVSLKVVkeNKEAGVKVLVPNGEFYANKVCDTFEEAVDLCLEALEKQLVKYKEKQRS-
    129 UniRef50_A6NQP5        Putative uncharacterized pr...    83     2e-15  1  27.4%  1:95    1:95    MKFVFTDKKVNLPRKVHAYAEKKVGKLDRYFKADAEAAIVFSVEKDRNNVELTIRSAGTIIRVAESTSDMFATIDAAVASVERQLRKNKARLEKR
    130 UniRef50_A1ZNT3        Ribosomal subunit interface...    83     2e-15  1  33.0%  1:91    1:96    MKLQFHSVHFNADPKLTEFIEQKANKLETFYDRIIDGEVFLRLEKNEHriEIKLNIPGTILFTKEHATSFEAATDQAVESLRRQLKKHKEK----
    131 UniRef50_C1F1L9        Ribosomal subunit interface...    83     3e-15  1  25.0%  1:92    1:92    MQIEYTGRHVHVNNACRALCEEGLERVSKLLGRIVSAHVVLSNEKHRCMAEITIEIRANKLVSTAESTSMETAVRMALEKAETQAKRFKQKM---
    132 UniRef50_B9XGM0        Sigma 54 modulation protein...    83     3e-15  1  28.4%  1:95   1:100    MKLILTTHNLTLTQAIENHILSRIDKLEHFDRFAINARVTLDHdnRQFKCSMRLAVPGPDLFAEDSEGDMYAAIDLVTKKIEQQIRKRQSKHKAR
    133 UniRef50_A6LE89        Sigma-54 modulation protein...    83     3e-15  1  34.4%  1:93    1:97    MDVRIQAIHFDATAQLEAFIQKKVSKLEQYFDGIILAEVTLKVVkkNKQASIMLSVKNGECFADKINDTFEGAIDDCVEALEKQLVKFKEKIR--
    134 UniRef50_Q2JEZ4        SSU ribosomal protein S30P ...    83     3e-15  1  33.7%  1:95   1:101    MDIVVKGRHTAVPERFRNHVQAKLAKLERLNSNIIRVDVELSKERNPrrVELTVYSRGPVIRAEAAAADCYAALDLAAGKLAERLRRAADRRVRH
    135 UniRef50_UPI00016C04A0 sigma 54 modulation protein...    83     3e-15  1  26.6%  1:94    1:94    MKYDVVARNTEMTKGMEDAIQNSISRLEKYFNDEAVIQVTITVEKQRQTVEMAINFDGQVLRAELEGENMYKILDDVVAILERQVLRFRNKLRT-
    136 UniRef50_C7H0Q0        Ribosomal subunit interface...    83     3e-15  1  31.2%  1:93    1:93    MRVNISAKNYHPSDHLKEMIDKKFSKLDKYFPEEAVTEIMVEKGKAGYKFEAMLQEKGTLFRSEVTAEDPYIALDIAVGKLSRQMSKFKSKLK--
    137 UniRef50_C2MBI5        Site-specific recombinase, ...    83     3e-15  1  25.8%  2:90 309:401    -NVHIQSLQFDASEALKDFAKKKIDRLARFDDTISKAEITLRLDkrGKIAAIRLFVPGHDHYAEKGATTFEEAIDEAIDALKRQIDRAKE-----
    138 UniRef50_Q1VZQ7        Putative uncharacterized pr...    83     4e-15  1  31.6%  1:95   1:100    MDINFNYVHVTASERLEELVTKKLEKLQDRYDWIVRSEVFFKTekTGMICEIKLSAPGQNLFASSNEKGFEVAITNTIDDVKRQLQKKKEKMSSH
    139 UniRef50_A6FEI0        Hypothetical sigma-54 modul...    83     4e-15  1  33.7%  1:95    1:96    MTFEITSKEIKVTAPMHEKLAMKYAKLERFNIPMINPHVTISKDKNnkKLEASIHLPQGQLLAVSEGEDLYAAITILGQKLERQLNKYSEKHSAH
    140 UniRef50_A7VXE1        Putative uncharacterized pr...    83     4e-15  1  28.7%  1:94    1:95    MKITITGRKVSLRDNFKERVGKKLKKFGRMFGEDASASVTVTVEKRRQTVEVTIraDGMVYRSEQTAPEMNDALDEVVNALGRQIRKNKCKLEK-
    141 UniRef50_A9BI17        Sigma 54 modulation protein...    82     4e-15  1  25.5%  1:94   1:100    MEYKVYTKEVELTEALENYIEKRMSklKKHPDIVSPSDVRITKERGIYKVEITTHInsKIIKVEERSNDLYEAIDEVTDSLERKIRKLKNRLQE-
    142 UniRef50_Q2BGD6        Sigma 54 modulation protein...    82     5e-15  1  33.0%  1:91    1:91    MNVKITHRNVKASDSIKEKVEGWLDSSQERYEVITSAHVILEKNDREDIAEATVHVAGKDIFAKASADNLYAALDSLADKIDRQLDKIHQK----
    143 UniRef50_B0T677        Sigma 54 modulation protein...    82     6e-15  1  29.5%  1:95    1:97    MQVQISGKHVDVGEALRARVSDEItsIGKYFDRGGDAEVVISKEGFAFRVDCSVKLagQQLISHGSGGDAHAAFDAALAKIETRIRRYKRRLKSH
    144 UniRef50_A6WEN5        Sigma 54 modulation protein...    82     6e-15  1  29.6%  1:81    1:87    MEVVVTGRHTDVKERFRRHVEDKLEKVVQFAPRAQRIDVELSHENNRrrVEITVRDKGPVVRAEACADDPYAALDLATTKL--------------
    145 UniRef50_C5CEL9        Sigma 54 modulation protein...    82     6e-15  1  20.0%  1:95    1:97    MKYNIYAKDIPVTDTMKEHIDKKLAKVFRAIdhFTSMDVRVMKERGLYKVEITGHLPGFVVRVEERGDDFYGVVEAIANTLERRIKRYKERARMR
    146 UniRef50_P33987        Probable sigma(54) modulati...    82     6e-15  1  37.1%  1:89    1:99    MQITIRGHHLSITPAIEENIRDRFTQMTKHIDQVNSMQVKLSKDHqnHIAEAIVRLPGIELFAQASADDMYNAITKLTDKLKRQLDKHR------
    147 UniRef50_D1C3T1        Sigma 54 modulation protein...    82     7e-15  1  20.7%  1:92    1:97    MDVQIKARNLRLTDALQEYIESRLQRLDKIDQKVTDAKFEIRSERNrmVAQFTIATKDAILRTEEKNRDIHVAIDLAIERMERQIRRFRDKR---
    148 UniRef50_B2V794        Sigma 54 modulation protein...    82     8e-15  1  35.9%  1:92   1:103    MQVEHVGKNIEITDFIKAYTEHKLERLKHYlpDSVRVRVVYDFEKHRHrvDIDVYLngGVIHAWEESNDLYSAIDFVIDEVERQLVRLKQRR---
    149 UniRef50_C6YXL0        Protein kinase n=1 Tax=Oryz...    82     8e-15  1  25.8%  2:94  82:183    -RLIMQGRNVKLNEKVKEHIEEKAGrvAKHSQLVKEVDVRLSARGGecRCEITLFTkhGVIRAEEDAESTYASIDLASSIIKRKLRKIKEKETD-
    150 UniRef50_C9LEJ2        Ribosomal subunit interface...    81     1e-14  1  27.7%  1:94    1:98    MELKIQSIQFNVTEKLQAFIQKKFAKIAKFNENISAAEVILKVTknNKSTVLNINVPGENFHVEKVCDTFEEGVDLCMESMLRQLSKYKEKQRG-
    151 UniRef50_B2UQU2        Sigma 54 modulation protein...    81     1e-14  1  44.4%  3:92  10:100    --ITITGRHVEVTDAIREFVTKKIEGIRLDFPRIMEVKVLLDVQRDRKISQVILFcdHITIDASTEGTDMYACIDETITKIMRRMRKHKTRL---
    152 UniRef50_Q3B2F4        Putative uncharacterized pr...    81     1e-14  1  26.7%  3:92  36:129    --IKVTLRHSNNHNAIEEYARSAVQSLTKLYPAILTCHVILDHQKNDFeaEITLHVPQHDFIAKESGTAYELCIDACVDALGRQLQKYKEKM---
    153 UniRef50_Q1PXY8        Putative uncharacterized pr...    80     2e-14  1  33.3%  2:94    3:97    -NITIVARHLDITEAIRNYALQKAEKIKKFFEWILHVQVTLDIGGdsHLVEMVVNvrGPTIVAEASNTDMYRSIDIVVDKVVAQLKKHKGKIES-
    154 UniRef50_B9L9D3        Sigma 54 modulation protein...    80     2e-14  1  29.5%  1:95    1:97    MNVTIVGRNVELTEAMKDHISKVVSEVEKYNLGILHSIVTVEKDKRdfTVEIIMNIpkGTAVVHYKDKDMYAALDKAKDKLEKLLRRYHDKITDY
    155 UniRef50_C6V4K5        Ribosomal subunit interface...    80     2e-14  1  25.3%  1:95    1:96    MKVTVSGHGFDLGSSLSEYITDrlFSVKKHLTQAAGARVSLSKEGRFFHVDVIVNSPISLIKASGESHDPYLAFDNAFSKILLKLRRYKDRLKEH
    156 UniRef50_C7NFI2        Ribosomal subunit interface...    80     2e-14  1  24.2%  1:95   1:101    MQITVTGRRAQVTDRFRRHVDEKLERLADIAPDISRCEVLWTHEPNPrrIEITCHDKRTVVRAEASAEREYEALDAVMAKVTERVRRLHDRRKVH
    157 UniRef50_Q5U9F8        RedA n=2 Tax=Myxococcus xan...    80     2e-14  1  32.6%  1:95  62:170    MnlQITYRGMETSEALSEHIRDHAGKLEQFYDGIVGCHVVvkQHGRHFHVRVDVSVPGRNIVASRdhEDAYQAVTEAFDAARRQLQHYADALNTH
    158 UniRef50_C6II14        Sigma-54 modulation protein...    80     3e-14  1  29.8%  1:94  25:122    MDIRIQSIHFDASEQLQAFIQKKVSKLEKYYEDIKKVEVSLKVVkeNKEAGIKILIPNGEFYASKVCDTFEEAVDLDVEALEKQLVKYKEKQRS-
    159 UniRef50_C1Z9P6        Sigma 54 modulation protein...    80     3e-14  1  24.2%  1:95    1:96    MQIAITSRHGSISPEAQELIREKSEKLLTYFARVTSINVTVSFEHHRATVEILVDAEhhDFVATDTGDEVIPVFYAALHKMEQQIHKYKEKVQDH
    160 UniRef50_A3VRA6        Ribosomal subunit interface...    80     3e-14  1  32.9%  1:82    1:84    MDVQITGQGIDLGRALQDHVTETLSavEKYFDRSAEGQVTFQKEGSGNAVEITLHLASGVFLahGKGQDAYGAFDTALQKLE-------------
    161 UniRef50_A8F3K5        Sigma 54 modulation protein...    80     3e-14  1  20.0%  1:95    1:97    MNYIFSTKGFDSSPAIEEYLEKRFQKVDRVlnDIVSAEIRAEKDAINYVLKANINFKGNIIVVQEKDPDLYTAIDRLSDALEKRVKKIKSTVRER
    162 UniRef50_C6Y270        Ribosomal subunit interface...    79     3e-14  1  33.3%  1:93    1:97    MKITVQSIHFNADQKLLDFIQKKVDKLDQFFDQIISGEVYLKLEnaNKISEIKLIVPGGTMFAKEQCKSFEEATDLAIESLRKQITKHKDKTR--
    163 UniRef50_A4U0N1        Sigma 54 modulation protein...    79     4e-14  1  32.6%  3:94   7:111    --LQITFHGIDHSEAVENRVREKVAKLEQFFDRITSCRvnLHHKGNSYLVRIDLNVPGSELVVkdEHEDVYAALKGAFQAMERQLKEYVARSRG-
    164 UniRef50_B3DYI7        Ribosome-associated protein...    79     4e-14  1  35.1%  1:94   1:101    MQIQISSPTVKLTDALYNHIESKFEKLTRINERILSAQVNIHHehQAFAIKARLYIPGKDIVAEDRGHDLYQAVDLIVDRLARQLRKRKTDLTD-
    165 UniRef50_C6W7I9        Putative sigma 54 modulatio...    79     5e-14  1  29.8%  1:94   1:100    MRLQMQAIHFDADPKLLTFIQQKLDKLDTFYDRITSGEVFLKLAKNENtlEVKLYVPGGTVFVKEQGSTFEEATDLAIDTLKMQVKKFKNKRNN-
    166 UniRef50_B7GE66        Predicted protein n=2 Tax=B...    79     5e-14  1  31.8%  3:90  13:108    --VIINGQNIELTPALVEHVNKRIgqINKLASniQECDVILSVSKNphRVEVVTNLKGTSIICHNESPDMYASIDAASHALYRKLCKYKD-----
    167 UniRef50_Q01PW5        SSU ribosomal protein S30P ...    79     5e-14  1  28.7%  1:94    1:97    MKITYTGRQVELKPAQAKKLEARFAKIGRLLdrECEVHVILSLERHLHKAEATINYYNHQLVGIGSSSDLFEAIDGASEKLEKQCLKERTKFRD-
    168 UniRef50_A8PQ11        Ribosomal subunit interface...    79     5e-14  1  35.1%  1:94    1:94    MQITITDDGIKVTDALKQYILDKFKRLERITHKTSTLHITLSLEHLDQVAKALMHTHGNEFYARAKNENLYTAIDELIDKIEQQINKHKLKSKE-
    169 UniRef50_D1YBK0        Ribosomal subunit interface...    79     5e-14  1  25.6%  1:90    1:96    MEVIVSGRHCHVSDDVRAQVEDRLSGVEKLKDRVQRAEVVFTAQGTkmTCEITLRAKGPVVRAVGQAEDKMVAFDMAADRLRTQLVKAAD-----
    170 UniRef50_D0LFC2        Ribosomal subunit interface...    79     5e-14  1  32.9%  3:84  63:150    --VVFSGRNVEIPDHYRIYVGDKLARLERFDPSIFRFDVELNHERNrqRVEITATGKGPIVRAQACGENFYAALEGSLDKLESR-----------
    171 UniRef50_A9W5P1        Ribosomal subunit interface...    78     7e-14  1  30.1%  3:95   4:102    --LRVTGHGLDLGTALRGRVEDRMAalAKYLDPHMSghVTLRRDGAAYRTDCVLhvTGLTLEASGAAHDVHASFEQTADKLEKRLRRYKHKLKDH
    172 UniRef50_A8J8B2        Plastid-specific ribosomal ...    78     7e-14  1  25.5%  2:95  71:174    -RIIIQGRKLPVTDAIKLYVEEKVAkvANFSHTLKEVDVTLshGKKEQKVEVTIylRNGVVRVEDAENNLYAAIDLVCDKIRAKLQKIKEKAISR
    173 UniRef50_C8W7H2        Sigma 54 modulation protein...    78     8e-14  1  37.2%  2:95   3:102    -DIKISGRKVSISEALRAHVDQKIGDALKVFdtPMSCDVVLRVDKnrKTTEVTVFVRNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVER
    174 UniRef50_C5WRX8        Putative uncharacterized pr...    78     8e-14  1  25.6%  2:91  73:171    -RLIMQGRNVKLSDKLKEHIEDKVGrvSKHCHLVREVDVRLSARGGesRCEITLFSkhGVLRAEEDAESTYASIDLAAAIIKRKLRKIKEK----
    175 UniRef50_B4S5H7        Sigma 54 modulation protein...    78     8e-14  1  24.5%  2:95  12:109    -NVQVTLRHTHNHHEIEQYARDAVQSLDKLFSGIINSHVILDHQNNDYeaEVTVHVPQQVLVAKEAGATYEQAIDSCVDIVGRQLKKYKEKLQAH
    176 UniRef50_C7RDL1        Sigma 54 modulation protein...    78     9e-14  1  29.3%  1:92    1:93    MKLNLIAKNFTLTDDIRNESIKKFDRLDKYFHDQQEMDVRFAKEGNDFVVETTAFlnGRILRSETSDETYPTAIDRNIDGLLRQVRKNKTKL---
    177 UniRef50_A2PYC3        Probable sigma(54) modulati...    78     9e-14  1  47.1%  1:70    1:70    MQINIQGHHIDLTDSMQDYVHSKFDKLERFFDHINHVQVILRVEKLRQIAEATLHVNQAEIHAHADDETC-------------------------
    178 UniRef50_C1QAL2        SSU ribosomal protein S30P ...    78     1e-13  1  28.6%  1:91    1:91    MHQNIIGKNVRITKNVREHIANKMQNIKIHADRIIDANIICDYMHGEYTVQGTIAFGKKVFHDKEKEKDLYVAIDAMFQKIEREIRKSKER----
    179 UniRef50_A2U255        Sigma 54 modulation protein...    78     1e-13  1  30.5%  1:95   1:100    MTINFEYHDVEGSERLEAYTTEKLEKLYNKFQMIVRADVFFKTENtgMICNIRLSVPGPRLFAEASHDNFISSINESVKDLDTQLTKKKDKMSTY
    180 UniRef50_A6DK82        Sigma 54 modulation protein...    77     2e-13  1  31.1%  1:90    1:90    MDIIVSGKNLQLTEALKDSVESHLSNMRVSYPKLNKAEVVLSHGHGKFKVEIVLHGNKINLDAHAETDDMYKSIADAVDRLDRQLEKKLE-----
    181 UniRef50_C0QU53        Sigma 54 modulation protein...    77     2e-13  1  33.0%  1:88    1:99    MKVEHVGKNIDVTEFIKSYTEHKLERLKPYIKDivEVRVTYAFEKHRHrvDIDIYFkgGVIHAWEESNDLYSAIDFVIDEVERQLVRL-------
    182 UniRef50_C6X055        Ribosome hibernation protei...    77     2e-13  1  26.7%  1:90    1:94    MKISVQSIGLTPHAPLEEHIEKKLSKLETYYDKIVECTVFLKVekENKTAEIILAVPGDDIVVKKTTSSFEESLDQCAEVAKRLLIKKKE-----
    183 UniRef50_A3U9H3        Site-specific recombinase, ...    77     3e-13  1  26.3%  1:95   1:100    MEINFNYVHVSASERLEAFTTEKINKLANRYDFIVKADVFFKKEntGMIAEIRLSAPGPRLFAESSNSNFEHAVAEVAEQLKTQLEKRKASMKTY
    184 UniRef50_B8GU63        Cold-shock protein DNA-bind...    76     3e-13  1  25.8%  3:95   9:113    --VEVTFRNMDPSPAVEDKVRAQIEKLGQFHDHIMACRVVVehKGNLYHVRIDLTVPNGELVahHAHEDVYVAVRDAFDAMRRQLQDRLRKQRGR
    185 UniRef50_B9CNR8        Light-repressed protein n=2...    76     3e-13  1  31.2%  2:94   3:101    -DIKISGRKVTVSDALRSHVEEKIGDALKVFdqPMTCDVVLRVDKnrKSVEVTVFVRNSVVRVVSSGDDMYGAIDEAAEKVTRQLRKYKTRIVD-
    186 UniRef50_B0MSP2        Putative uncharacterized pr...    76     3e-13  1  28.7%  1:94    1:98    MNVQIQSVKFDADRKLVEFVEHKMDKLDRFVERAIGADVILKLDkgNKVATINLHIPGDDLVAESRGKSFEEAVDLSIEALKRQIDKYKGRLEK-
    187 UniRef50_A0M1S9        Sigma-54 modulation protein...    76     3e-13  1  27.4%  1:95    1:99    METIFEFVNIDKSENLEAFTQKKLNKLETKYDWIVRANIFFKRdpNGYITEVRLSAPGPEIFAQSDENSFEASIAETTRDLDRQCEKRKAKMSTH
    188 UniRef50_Q487B8        Ribosomal subunit interface...    76     4e-13  1  27.8%  1:90    1:90    MKIKISGHHVEITEGIKQSIENKFAKISKHYPSIMTLNSTITVEPHLQKLEVTTLYEGEKVTVNASDKQLYVAIAKVAKKLQSALAHRKG-----
    189 UniRef50_Q2S0T2        Ribosomal subunit interface...    76     4e-13  1  29.0%  2:94  30:125    -QTQVTTRHVDVSDRVHEYARDRTAKLEQFYDGITGAHVILGKDneNKTASINIDVYQKRLSAEDAASSHEEAINLCVDHLRRQLEKYKAKLRS-
    190 UniRef50_B0SB82        Sigma 54 modulation protein...    76     4e-13  1  27.4%  1:95    1:95    MKINYTWKHLDRSEAAENYADEKLERVTKFVQKIVSCEVSFETIHGEIHANLKLNADGNNFNAHNQDKDIYVCIDGLEDKIISQTSKHHDKKSQH
    191 UniRef50_A7I0V2        Sigma 54 modulation protein...    76     4e-13  1  26.3%  1:95   1:100    MNLSITGKQFELTDSIKNYVESAFENLNKYGLDIISGRCVISAdkKGFIVDFLINlkKDTIVIRHKDKDLYAAIDSITNRASKILRRTHDKNTTH
    192 UniRef50_B1ZMG4        Sigma 54 modulation protein...    76     4e-13  1  31.2%  2:94  12:109    -KIILQGIHFTLTDAMQEIMREKFSVLLRHNDYIVRINVRVHQDqhHYTATAQIEIGGPDLVASAEGKDAYDVIDVLVEKLDRQLKTRQGRRKD-
    193 UniRef50_D1B1B4        Ribosomal subunit interface...    76     5e-13  1  21.3%  1:94    1:99    MNTSIVGKQFDLTEPIKAYIEGAVDALGKYNLDIISVRTVISAdkKGFSVEFAINMAHktVVIQQKDKDVYAAVDLAVERAKKVLRRHHDKLNS-
    194 UniRef50_Q2VZ29        Putative uncharacterized pr...    75     5e-13  1  28.7%  1:94  39:150    MQiqITFHGVDHSDAVETRIREKVAKLEHLFDRITSCRVvlHHKGEPFHIRLALTVPGDELVVkhVNEDIYVALREAFAGMERQLKEYVDRSRG-
    195 UniRef50_B7RH54        Cold-shock DNA-binding doma...    75     5e-13  1  22.8%  4:95   6:108    ---EVTFKDIDHSDAIEARVRERVDKLEAMSPEIIRCQVWvrHKGTEYIIDISLQMPGSTLHidHAHTDIYVAIRDAFNAMERQLRRWQDQHKGR
    196 UniRef50_B5JG17        Ribosomal subunit interface...    75     6e-13  1  31.5%  2:90   8:102    -DLIITGIHMDLTEAIKQSVREKVERLFRHEERIIRVKVELEcsEHEFIAKGHIEINGPTMNVSVSDPDCYKAVDLLVDKLDRMLRRRSR-----
    197 UniRef50_C7PUF5        Putative sigma-54 modulatio...    75     7e-13  1  24.2%  1:91    1:96    MNVQIQTVHFDADSKLIDHVSKKLQKLNTFYDRIISVEVFLKLDGIAhiAEIKVHIPRQDLFVKHESKSFEESFDLAFDSVVNQIKKTKEK----
    198 UniRef50_A6FSM7        Sigma 54 modulation protein...    75     7e-13  1  24.5%  1:94   1:108    MqlELTFRHMDQDDALRALIETRVTQLDALFDGITSCHVTLQPGHNRHrvTIELRVPGTELVVHPTKGDVPaaIRDAFTAIERQLRAHKQRISG-
    199 UniRef50_A0LVS3        Sigma 54 modulation protein...    75     9e-13  1  29.7%  5:95    1:97    ----MTSRKVEVPARVRSYVQEKLAKVEKLCPKVIRVDVEISRERNPrrVELTCISAGPPIRAEAAAETMTAAFDLAWEKLEARLRKAADRRRVH
    200 UniRef50_B6EGD2        Ribosome-associated inhibit...    75     9e-13  1  36.8%  1:95    1:97    MKVEITGNNIDITPGIRERIEGKFKKLerHLDIIGRHASVTKRSNGKHKVEAYVTIAGGKVAASAEQEDLFGTIREMYQKLERQLDKLQHKSEAR
    201 UniRef50_Q84M68        Os03g0856500 protein n=5 Ta...    75     1e-12  1  25.8%  2:94  82:183    -RLIMQGRNVKLNEKVKEHIEEKAGrvAKHSQLVKEVDVRLSARGGecRCEITLFTkhGVIRAEEDAESTYASIDLASSIIKRKLRKIKEKETD-
    202 UniRef50_B6IW92        Ribosomal subunit interface...    75     1e-12  1  24.7%  1:81    1:83    MQVTVKGKQLDVGDALRSHVTDTISAlaKYFGNPLDATVVISRDAHLFKADIQVHvrGILLQSYGEATEPYPAFDDAAEKV--------------
    203 UniRef50_Q30TJ3        SSU ribosomal protein S30P ...    74     1e-12  1  25.3%  1:95   1:100    MNISLTGRHVELTDAIKAHMNASIQTLSKYNLDIISVNVitKKGKDHSVVEFVINLAHKniVIEQNDQDLYAAIDLATTRAQKAMRRIHDRDSGH
    204 UniRef50_A9KBC8        Ribosome-associated factor ...    74     1e-12  1  27.4%  1:95   6:109    MQvqITLRNIDPTPAIEDRIHKKADKLSQYSDQIISCHIVVehQGKLYNVRINLTLPGKEFAVNRNeeDLYVAIRDAFDDMARKVEEEMRMRMGH
    205 UniRef50_A2TTF7        Site-specific recombinase, ...    74     1e-12  1  24.5%  1:94    1:98    MDVQIAYVKIDRSEALTTYIEDKLVKLFKRYDWLIKANVIIKKehHNAICEIELSVPGPRIFAQSQEKNFEVAVKETISDLDVQLKKRKAQFTN-
    206 UniRef50_C0E9I9        Putative uncharacterized pr...    74     1e-12  1  21.7%  3:94    2:93    --INITARGFELKQGAKDGIEKELKRVDKMLPESALFDVTLSKVTTGYKCDITVKYTGSFIRGEAAAEKIEPSIDFAVDDLKRKLRKLKTSLVD-
    207 UniRef50_Q1IR29        SSU ribosomal protein S30P ...    74     1e-12  1  24.5%  1:94    1:94    MNVEVIGRQYNITPAVRKEVESGLEKLTKILGESFKSKVILSVEKHRNLAEITIKRRAQDLVGLGESTDMRTAIGEALEHIEKQALKHNNRRRN-
    208 UniRef50_A6LJQ7        Sigma 54 modulation protein...    74     1e-12  1  22.6%  1:93    1:93    MEYRISTKGVETTEALKNYLEKRLEKIDRVVEDNVRLDVKLEKDSSEYVGKIMVHYLGKDLVVSEKSTDVYNLIDLLTDSFEKKIKRERDYVR--
    209 UniRef50_B7IG48        Ribosomal subunit interface...    73     2e-12  1  16.8%  1:95    1:95    MDYRVSAKGFDLTNAVKNYIEKRFQKVDRVLEDEVHLDIKLEKDATSFIGKAMIHYLGKDLVVTETSDDIYNLIDILSDAFEKKLKREREYVRTR
    210 UniRef50_C1RNF7        SSU ribosomal protein S30P;...    73     2e-12  1  29.5%  1:95   1:101    MEIVVAGRHTEVSPRYRAHLESKLAKIEQLAPRAQRVDVLVSHEPNPrkVELTVVDKGPVIRAEACADDAYAALDVALGRLLERLRRARDRRKDH
    211 UniRef50_A4AQL9        Putative uncharacterized pr...    73     2e-12  1  25.3%  1:95    1:99    MTIDIQYVQMPTSEAMNELLSAKLDRLATKYDWIIRAQVHFKQegKGKICEMELSAPGPRIFAQSNEDDFEKAAAKTIKDLEKQLSKRKAIMNKR
    212 UniRef50_B5D3P6        Putative uncharacterized pr...    73     3e-12  1  27.7%  1:94  15:112    MEVRIQSIHFDASDKLEAFIQKKAEKLEKFCDNIMKVEVSLKVVkmNKEAGVRVLALNSEFYAEKISDTFEESIDVCMEALSKQLLKAKEKLQG-
    213 UniRef50_A6Q4Q4        Sigma 54 modulation protein...    73     3e-12  1  22.6%  3:95   4:101    --LHIYGKNFDLTDPIKTYIQDAADSLMKLNLDITGINATVSAdkKGFTFEFDIHvkKGNVVITQKDKDVYAAIDLALARAKKVLRRYADKIKNH
    214 UniRef50_A8UI75        2-dehydro-3-deoxyphosphooct...    73     4e-12  1  27.7%  1:94    1:98    MKVNTQSVNFNADSKLIDFIQKRMDKLDMFYDKIIQSDVYLKVekENKIFEAKVSVPGDSFIVKKQCKTFEEGTDSAIASLERQIKKRKEKLRS-
    215 UniRef50_B9Z3V7        Cold-shock DNA-binding doma...    72     4e-12  1  25.0%  3:94   5:103    --LQINYENLPESEALSTHIQQKLEKLEQFFPRLIGCNVTvsNQGEHYFVQIDMTAPGTEVVSnqNHEDVYVALRDAFDAARRMLEDHVRIRRG-
    216 UniRef50_B4U9J0        Sigma 54 modulation protein...    72     6e-12  1  32.6%  1:92   1:110    MQIEFIGKHFEITEHLRAFVESKLSKFKRLleDQTEIVVTISSARAKhrVDIDIYIkgGAVHAWEEDKDVYTAIDKVLDEVERQLLKLKERR---
    217 UniRef50_Q0BUA9        Ribosome-associated factor ...    71     9e-12  1  21.1%  1:95  35:131    MHITVSGKQIDLSDALQERVASQLDTISryFDQALEAQVTFSRLRSFFICDINLHarGLILRGEGEAADANGAFDDAAEHIAKRLRRYRRRMNAH
    218 UniRef50_A9G3G6        Cold shock protein n=1 Tax=...    71     1e-11  1  25.5%  1:94   1:103    MQVELTFRHIGKSPSLEELIREQANKIERFNDHINSCAVVVERdgGEYRVRVDLHVAghEIVSEERAArlPAAVRDVFQRAGRQLKKLADEHRS-
    219 UniRef50_C3CTB3        Ribosome-associated protein...    71     1e-11  1  33.3%  1:90    4:92    MNLTMTGKHVSLTEGMKFTMNKKLDFLNKFLKEDTVVSVTVQVEKRL-TISVSVPFNGELIYAKSKDEDFYVALDSVVDKVKRQITTAKD-----
    220 UniRef50_Q2SWQ3        Sigma 54 modulation protein...    70     2e-11  1  21.1%  1:95 104:207    MKleVSIQGMPRSAALEDAVARHAAKLERYCADIIRCRVSvkHQGKPFGVHIDVTIPGHEIVSneSDEDVYVALRDAFSNAERMLDDAVGKRRDR
    221 UniRef50_A1SY46        Cold-shock DNA-binding doma...    70     2e-11  1  25.8%  3:95   5:113    --LQITFRDMPHSDAVETHIREKVAKLDEFYDHIMACHVVIeqQGKLFRVSIDLTLPDGELLvhHAHEDAYVAIRDAFKSIRRqvRKQRGKVKTH
    222 UniRef50_UPI000174494B hypothetical protein VspiD_...    70     3e-11  1  33.0%  1:94    1:98    MQIHISPRNLKLTAAIHQYTAERIEAIEN-LGEIIATHVVLIHdkERFRVKAHLAVAGPDIHADVADADLYAALDKASSVLARQLRKRKTALVD-
    223 UniRef50_Q3YS76        Sigma 54 modulation protein...    70     3e-11  1  23.2%  1:95   1:100    MNIIITARGFDVTDNIKTYVERSVQdiTKFfdSTVSVKVTLSKDANLFNSTISIsiKSEFIRISKTSDTAYHAIDNSIDYLRDKLQKHkeKINKY
    224 UniRef50_Q00W70        Chloroplast-specific riboso...    69     4e-11  1  30.8%  2:92  51:151    -KMLVQGLHLEITPAIDEYVRSKIGRACSHVddIREVDVRCskGGVEHKTEVTvmTRGPTLHADGVGENLYATIDQCADIVTRSIRKHKEKH---
    225 UniRef50_B0TQE4        Sigma 54 modulation protein...    69     5e-11  1  24.2%  1:95    1:96    MSIKITARGFELPDYLEQTIKEAFVKFDKFKISFYSKDVFMKLegHLFIVEIATKSDLGKIDSKGEANELMDAFNEAFDRLDRQLIKHKEKPYAH
    226 UniRef50_C3XP50        Sigma 54 modulation protein...    69     5e-11  1  26.6%  1:94   1:107    MQTIITSRHFELTQAMKDYIFSLTQSLEKYQLDILSTRVIVTYqkRTFGIDITLSLAhnTLVINQIDKDFYAAVDLAIGRMHKILRRYHDKHNK-
    227 UniRef50_A3XP15        Putative uncharacterized pr...    68     7e-11  1  26.3%  1:95  20:119    MNYNFEYHDVAASAALEDFTKEQLDKLVNKYDFIVRADVFFKTENtgKIAGIRLSAPGPRLFADHSSKSFHESVKEATRELNIQLKKRKDKMKSH
    228 UniRef50_D2RAS6        Ribosomal subunit interface...    68     7e-11  1  25.3%  1:79    1:85    MEIVITGRHTQINQRFRDVVESKMNRVTAIAPDAQRVQIVLTHEGNpkRVEITVVAGSTVIRAEASSTDQFSALDMALD----------------
    229 UniRef50_Q7UMU4        Probable sigma-54 modulatio...    68     1e-10  1  28.4%  1:95    1:97    MQVNVSARHGALQPGDQALVEEKALKLRRLYDRVNAIDVTIDLENLDkhVEFRISVEhdDLIAHAEATTVIAALDSAIPKAEQQLRKLKEKKTEH
    230 UniRef50_Q3Z6I7        Ribosomal subunit interface...    68     1e-10  1  20.7%  1:92    1:97    MEIQITTKNCRLDNRTRSYIQRKMGRITRILPQISEFRIELDEEQTrfILKATLNTGTDVLYAEERAENLLTAADRAVEVLNQQIDHAKGKM---
    231 UniRef50_D2NS77        Ribosome-associated protein...    68     1e-10  1  27.8%  2:80    4:86    -EVNIYGRNIKVTERLEEYVNDKVQKFAQLGDNVKDIDVKFSKDGhsIRVEITVVGTGPVLRSEAQGHDKFAVFDETYGK---------------
    232 UniRef50_B8DT99        Sigma 54 modulation protein...    68     1e-10  1  25.9%  1:81    1:87    MDIVLTGRHIQIKQKFRDVVESKMNRVTTIAPDAQRVQVVLSHEGNPrrVELTVVAGSTVVRAEASSLDEVSALDLALDKL--------------
    233 UniRef50_B7L313        Putative uncharacterized pr...    68     1e-10  1  21.7%  3:94  10:103    --IVVRSSSIGLGAALRERARAGVERVakYFGRLNAATVYFSRDGWGYRCTVNIDMGALRIvgESLGFCCHAVFDAAMRKAAKQLRRLKRALRD-
    234 UniRef50_Q30TL0        Sigma 54 modulation protein...    68     1e-10  1  21.1%  1:95    1:96    MNVQVHAKDITLSANAKGHIETAIAAFKKYSLDITTVNVNLKKEKKGVLVEFDIHIAHSevVINQADEDLDTAIDLAIDRASKALRRLHDRVVSH
    235 UniRef50_A0LQL3        Cold-shock protein, DNA-bin...    68     1e-10  1  26.1%  3:94   5:103    --LEISAHNVHISDATEELIREKAEKLDRINDKLIGCRVRVEIPHRSQrvRIELAVPGRDIVIKRedEDLHAAIVGSFETAQRRLKEVAEKQRG-
    236 UniRef50_A6VX39        Sigma 54 modulation protein...    68     1e-10  1  32.3%  3:95   4:100    --LNISGHHVQSGEEVQEVVKDKMDHLARINNQITTINVTLNTEKHGThvEASVHIPGHDLFAMVQTeqLKPALDMLVGKLEKQLIKHKAKHAGR
    237 UniRef50_C1DL86        Cold-shock domain-containin...    67     1e-10  1  23.1%  3:93   5:107    --VQIHFHQIEPSPAIEAHIREQCDELEEFYERIIGCSVTFDAPHRRHhvKVHLTLPDGDIHseHAHEDPYVAIRDSFRAVRRQLEDYARKRR--
    238 UniRef50_A4SAX9        Plastid-specific ribosomal ...    67     1e-10  1  31.1%  5:94   3:102    ----VQGLHLEITPAIDEYCRAKIGKACSHVdeIREVDVRCsrGGHEHKTEVTvmTRGTTLHADGTGENLYATIDSCADIVTRAIRKHKEKHSG-
    239 UniRef50_C0BJ85        Putative uncharacterized pr...    67     2e-10  1  21.7%  2:93    3:98    -NVHFRAVNYTADVTLKEFAQQRLGKLTTFYNQIIEMHCFTKVENTSDkaELKIEIPGENVVVKKMCKTFEEAIDSAADSAERILKRRKEKIK--
    240 UniRef50_A3ZLA7        Probable sigma-54 modulatio...    67     2e-10  1  29.1% 17:95    6:86    ----------------QETISEKVQKLTRLFERITSVDVTVDLEHNDKpvELRVTarTDDFVAADSCSSLLGALDNSIHKMEQQLRKHKERLKDH
    241 UniRef50_B1ZUV3        Sigma 54 modulation protein...    67     2e-10  1  27.7%  2:95   8:108    -EVIVSGIHLELTPSLKYFVREKAERLFRHEERIIRVRVELECDSkrFKAKGHVEIHGPDLNAVVQADECHKAISLLIDKLDRMLSKRHhkVRRH
    242 UniRef50_C0ADT6        Sigma 54 modulation protein...    67     2e-10  1  23.4%  2:95  38:139    -ELIVSGIHLELTPSLKTFVQEKADRLFRHEERILRIRIELECdsQRFIAKGHMQINGPAFNASVVSGECHNAVNLLVEKLDRMIRRRSrkVQRH
    243 UniRef50_B3QW75        Putative uncharacterized pr...    67     2e-10  1  18.9%  2:91  12:105    -NVQFTLRHSSNHRDIEAYAKDAIKAFHKYYTDILDCHIILDHQKNDkiAEIKAHVPSHTFVSKEQGPTYEVAIDTCVSNICKQLKKHRDK----
    244 UniRef50_B3RGS8        Sigma 54 modulation factor ...    66     3e-10  1  41.4%  1:87    1:87    MQIEITG-NVEITEGMVSFISHKMSKLERLHPSANYARVSVKVENDHQEVMAFIFDngKEVIAKAKGSDAYEATDRMVDVAARQLAK--------
    245 UniRef50_C7RTG4        Putative sigma 54 modulatio...    66     3e-10  1  21.1%  1:95   1:102    MQIVIQARGFDLSAGLREHVERRLhaLDWAQYHVSRIVVSLsrGGEDKRCQIRVAMAgpEVAIDDIESDLYLAIDRAVDRVGRTLSRRLARQREH
    246 UniRef50_Q1D1Y2        Ribosomal subunit interface...    66     3e-10  1  17.0%  1:94   1:102    MKVLLRGVHLNLSDALKSYVDEHLVriERFADDEaeIDISlpKGGMDKECRVTVRLPgsSVHVTETADSLFPAIDASRDRLETSLKRMLGKRRD-
    247 UniRef50_A4BJM4        Putative uncharacterized pr...    66     3e-10  1  24.5%  1:94   1:101    MQIEIRSKNIDMTPSLRDYVRRRLsaLGARAGQIQRVQVMLskGGNDKHCRILVNVPykDVVIEDCQTELKGAIDRAAARTSRTLTKRLMKLQK-
    248 UniRef50_A5G2U9        Cold-shock DNA-binding prot...    66     3e-10  1  22.8%  3:94   5:108    --LQITFKDIDRSPALEARIREKAEALSRFEARILRCHVIIehKGKLYRARIEIAVPRGDIVINRehEDPYVAVRDAFDAAVRKLEDHARRLDD-
    249 UniRef50_C0A867        Sigma 54 modulation protein...    66     3e-10  1  21.3%  2:95  12:110    -KLLLRGVHLNLTDAMKASIEGMVERLVRHEPRIDRIRIDVELDrqMFNAKGIIELRGPDMIASVSSEDAYKSVHLLIEKLDRMIRKRDSALKGR
    250 UniRef50_C7M130        Putative sigma 54 modulatio...    66     4e-10  1  22.1%  1:95   1:100    MAVDLRCRGCTLTEQQRAHVEDRIARLEKYLGAPERVEVHVERAGnrVVTEVTYVVSKAVVRARGVGETELESFDRAEERLKRRLERLKGRLVAR
    251 UniRef50_B9KIL8        Putative uncharacterized pr...    65     5e-10  1  23.4%  1:94    1:98    MNVIITCRGYKATASIKSYVEDSIshLGKYLHDsiNVRVVMAKEAHMFTACVSIHEDHHEFvaSKSAETVYKAVDAAVTHVANGLRKYKEEKTD-
    252 UniRef50_UPI0001C315AE sigma 54 modulation protein...    65     7e-10  1  29.5%  1:88    1:93    MRIEVKGRNTSVTQAQREQIERRFRKIARQVSELAQLEVELSEQRNpqVAEATLYLKGVTLRARAEAGDMGHAINLCEEQLFKQVKRH-------
    253 UniRef50_A5IBA4        Sigma 54 modulation protein...    65     7e-10  1  20.4%  3:95   5:109    --IQVTFRNMDPSKAVESRAIKLAKKLDCLYDKIMGCRVVIESPHRHhhVRIDLTVPDAELVVSRehEDVYVSLRDAFNAIERQLKNYANQRRGH
    254 UniRef50_A6DIV0        Putative uncharacterized pr...    65     7e-10  1  14.7%  1:95    1:95    MEIIVASRHFKVQKDVKTQIVEEMKKFDTCASKLTTAEVILNNIHHNIHVEIIIRGKHLNCKSEAETDDLLKSFYLAFKKMRNQLDKRRTKVKNH
    255 UniRef50_D1AUL6        Putative ribosome-associate...    65     1e-09  1  20.0%  1:95   1:100    MNIIIACRGYKATASIKSYVENSisHVGKYLRdeINARVVMAKEAHMLTACVSICEDHHEFvaSKSADTVYKAVDDAVAHIASKLRKYkeKIDRH
    256 UniRef50_B4UF98        Cold-shock DNA-binding doma...    65     1e-09  1  23.7%  3:95   5:110    --LQLAWIHVEPSEPLAERVREAVRRLERFHGRITGCTVALEAPSRHhrVRIELRFPGGRAVvsRDRADLYTAVNAAFRDVRRQLEDRQRRMDGR
    257 UniRef50_Q14ME0        Putative uncharacterized pr...    64     1e-09  1  23.2%  1:95   1:100    MEYKIRSKNIIITDAMDQHLVDTFNKLLKyeNDLVHVDIEFTKENnvIHTAIDIRGRNNFLKAEVRNSDFYKAVDQSLYKVEEQLRKIKGKQEDR
    258 UniRef50_B5JNT4        Ribosomal subunit interface...    64     1e-09  1  28.3%  2:93   6:102    -NVEIVGRHLELTESLKAKVNEVVEKLYEHDSGITRIRVELEMeqNEFIAKGHVVDRHDHFDASALGDDLYQAIGSLAEKLDR-LIRNKSRRR--
    259 UniRef50_Q11G12        Sigma 54 modulation protein...    64     2e-09  1  21.7%  4:95   6:109    ---KVTFRNMERSDAIEGHVMRRVEEVEKCFDRVIGCDVVikLSGRAFKVHVALQIPGPDVVVtkAAENVNLAIHEAFSAATRRLLARKDQMTGH
    260 UniRef50_C8WD98        Sigma 54 modulation protein...    63     3e-09  1  24.2%  1:95    1:98    MDIRISGHQIDTGAALREYVNDHLSQisKYFPKCLSASVTFGNRRHAIicDIIIhmRDIILKASGIDKDAHAAFDQAAAKIEKQLRRHHRRLQTR
    261 UniRef50_B4WI97        Putative uncharacterized pr...    63     3e-09  1  23.2%  1:95   1:110    MRveISYRGVNKTEALETLVAEKIAKLEKFYREISSCHLAIEksGSPYRVRLDITVPEDREVVVDKSPdlEAIIRDTFDIANRQLKELNEQQHNH
    262 UniRef50_A4CQ98        Sigma-54 modulation protein...    63     4e-09  1  26.9% 18:95    2:83    -----------------EFTQRRLDKLEQFYDRVIRAEVFLKVekENKVAEIKMQVPKDTFVVKKQCKSFEEAVDSACSSLERKLVKKKRKPRAY
    263 UniRef50_B3CQ21        Probable sigma(54) modulati...    63     4e-09  1  22.3%  1:94   1:101    MNIIISgqYNSVKFNLNQYVNRKIINVakYFDNLKAPNVHFSKehNQFKCHIVVNpqHRIINSTGYSNDVFASFDLARVKLEQQLRRYKSKLKD-
    264 UniRef50_B1Z8J5        Sigma 54 modulation protein...    62     5e-09  1  20.4%  2:94   9:103    -NILVQSSNVDLGSVLPDYARAGIMQVakYIGNLNIAAVHFNREGGGYRCTVNLQMGapMMSGEADHRNAYAAFRRALEKVAKQLRRAKRELRE-
    265 UniRef50_D2QEF9        Putative uncharacterized pr...    62     5e-09  1  24.4%  5:94    1:96    ----MHAVKFTADQSLLDFIQAKLDKLDTFHDRIISGEVFLRLEgkEKIVEVRLLLPGKELFVKEHDKSFESATDRVMDVLKDKLVRFKQKRND-
    266 UniRef50_A0LCJ5        Putative sigma 54 modulatio...    61     7e-09  1  23.4%  1:94    1:98    MELKLEGRQMDIGNELRDRITTRLQTLDQRFGPITHARVSIErhNNEQRAEVkiNVPGNTISSTKEAATVIPAVNEALDTLTMELQTWAEKNKK-
    267 UniRef50_B8HME4        Cold-shock DNA-binding doma...    61     9e-09  1  20.4%  1:93   1:108    MKveITYRDVPKNAAIESLVQEKITKLERVCDHISSCHIAIEkrGSPYRVRLDITvpSHELVAESneENQytVIRDAFQKAERQLRELSRQQR--
    268 UniRef50_A9CX73        Probable sigma54 modulation...    61     1e-08  1  23.3% 10:82    1:75    ---------MEIGESFRTRIDDHVsaVRKYFDGGFSSHVTVEKSGSRFQADCKIHLdgVVLHATGEAQDPQPAFDAAAERIE-------------
    269 UniRef50_Q21KB8        Putative sigma 54 modulatio...    60     3e-08  1  16.9%  5:93   7:101    ----VVYRDLDTSPALNDVIYKKMEKLHRYSDSIIHSKVVlkHKGKLYRASIEIGLKGHPLTVSQDAPNVHIAVRDAFAAAERKIKEDNSKRR--
    270 UniRef50_UPI00016C56FB hypothetical protein GobsU_...    60     3e-08  1  17.9%  1:95    1:99    MQVTVSVRHGQLGDDIQQQLKEKGEKLLHFFSRLTMIEITVDLHrgNMSVEVRATAEhhEFVGSDHAEDVLAAFNKAAAHVKQQVTHYKEKIQDH
    271 UniRef50_D2MK58        Putative uncharacterized pr...    60     3e-08  1  17.9%  1:95   1:102    MDLKIDSRNVGMTPRWKQEIQDRVTTLQTEYDNITHARITLTKNPHHKkaEALIVlpRHTVTARKEAKSFEEAIRSAFKAAMTEVKKFREKPNSY
    272 UniRef50_Q2IHD0        Putative sigma 54 modulatio...    59     4e-08  1  14.7%  1:95  34:136    MKLVIHSHHLTLPPDLGAFLRKHVTrlARLQDdaSELSVHlkKGGVDQECRLSFRMPgrTLHVESVQDDLHTALLDAAERLKRLVKRELEKMRSR
    273 UniRef50_Q2RYB7        Ribosomal subunit interface...    59     5e-08  1  23.7%  1:93   1:114    MQiqIVFRGIDHSDAVEERIREKAAKLEQFHKNITACRVVVekRGEPFLISVQVSVPGEDLNAVSshEDVGIALRDAFESMERQLRDIAERKR--
    274 UniRef50_A1WVP9        Ribosomal subunit interface...    58     7e-08  1  23.4%  1:94   1:102    MQIQIngAGVHISDALEESIREALGAVDRRfeQLTRIEVHFqkGGVNKHCRIEARPRGLdvLAENTADDAYDAARGAAKKLERVLDGRLGKLAD-
    275 UniRef50_UPI00006DCB56 hypothetical protein CdifQ_...    58     1e-07  1  26.5%  1:49    1:49    MQIIVSGRQMKLTDGIKGYVDGKLSRLEKYLDPESEVKVTVSAKKDRQK----------------------------------------------
    276 UniRef50_B1ZU16        Sigma 54 modulation protein...    58     1e-07  1  31.2%  2:78   12:92    -KLVIRGIRLWLTDALRSTIETKAERLFRHEPRIIRVRVDLDREHRnfVAKGRIELHGPDLLASVVSNDAYKSIDWLI-----------------
    277 UniRef50_A6CY25        Putative uncharacterized pr...    58     1e-07  1  20.9%  3:93    1:93    --MQITSMHVDITPSMKTLIEEKFAHIQGHFHSIdkCHIIYHESYRLFEVEFTVHLDHEQFFTKKSNATFAIALQEATQAVLHSLEKHKTKLS--
    278 UniRef50_A4VGA6        Ribosomal subunit interface...    57     2e-07  1  21.1%  1:95   1:103    MHVQVNSNHIPGSVELHEWVGTTVerLERFDDFLTRVEVHISDEndDKRCQIEARPKGHqvSVTHKAESLQLAVDGAADKMQHALENLMGKLDTR
    279 UniRef50_Q11EM9        Cold-shock protein, DNA-bin...    57     2e-07  1  21.1%  1:95   1:113    MQvqIAFHKAEKSDWAEQEIRARVDKLQTYHDRIIGCRVTVDQRARNvvVRIEISLPgpVIVAYeqSPDLGNAINDAFNLAERRLAQIKEARDGR
    280 UniRef50_Q1IU45        Sigma-24, ECF subfamily n=1...    57     2e-07  1  20.2%  1:94   1:100    MNVHISYKGLEKTPDVESTVKLHLKKLErfRPELVSLhvLQKSPRAGFVVALNLKLPTTDIAAEQANPNSAVAVKAAFDSLIGQISRHKGALRN-
    281 UniRef50_Q1D2Z7        Putative uncharacterized pr...    57     2e-07  1  23.4%  1:94   1:101    MRVEIRARNIPLTETLRTYAERRVraLDRLSDRVKEVVVRLekGGVDQVCRVALRlhGRELAIESSDTNLLAAIDRTLERASNAVTRAVGRAQR-
    282 UniRef50_D0MIH4        Putative sigma 54 modulatio...    57     2e-07  1  18.5%  3:94   8:104    --FEYYSENHELTDALKAKVEQRIQKLAKKHHDITGVSVAitHTPHAYRARVVVYHKPENVVATEVAPTVEESLLRALDSVERQVREQRRKLRE-
    283 UniRef50_D2QHG3        Putative uncharacterized pr...    57     2e-07  1  23.3%  2:87  11:101    -RLSINAVNITVDDAFRDRIAQALVKLRRYYsdLITAEVFLRVepNDKSLRIVYGVPGTGAFAEEEGDNWDTMLHTVTGKLKHQLER--------
    284 UniRef50_A4VJU5        Ribosomal subunit interface...    56     3e-07  1  27.4%  1:95   1:104    MQVLVNSNhiSVTADLEERIKATVeeLDRFDDHLTRVEVHLNDEnhDKRCQMEARVKGHdiSATHKAETLDLAINGAAEKLNHALSHALDKLNRH
    285 UniRef50_A6W1F5        Putative sigma 54 modulatio...    56     4e-07  1  24.7%  1:93   1:100    MRIKVKARRLALTKSLKAYVKRRLsaLNSRYDNIQQVIVTLtkGGEDKHCQVLVKINGqeVVISEQQADMYSAIDSAAGRTSRTVTRRIERLQ--
    286 UniRef50_C3XBE7        Predicted protein n=2 Tax=O...    56     4e-07  1  19.1%  1:94   1:101    MAPTIITKGIKAGEAIQEYIQERMDtlSHTQNSIDYIMIRLskSGFKKRCLIQLSLPGMsiVVTEFAADMKSAFDSATRRASRLLNKTLSKAKE-
    287 UniRef50_A4XWR8        Putative uncharacterized pr...    56     5e-07  1  20.4%  1:93  30:131    MQVMVNsnHIHGSAALEDRVRGRvdKLKRFEDHLTRIEVHFNDegQDKRCQLEARLKGRdvSVSHNADQLEQALEGAIDKLGTVLERNIGKQR--
    288 UniRef50_A5ETX8        Putative sigma 54 modulatio...    55     5e-07  1  25.3%  4:94  15:111    ---NIVTRNLHGHPFLREKLYSKIRALEQHLQRFPPDAVHLLIekEEHRAVLTLRLPSHILHADKSAKSAITALTHAVKALLQELKALKEKMRE-
    289 UniRef50_C6QHD0        Cold-shock DNA-binding doma...    55     5e-07  1  23.7%  3:95   5:110    --VQISFEHLEHSGAIEHRVREQLEKLEQFCGRLTAARVVVAREQRRHhvRLLLSVPGAEDIatGRHEDIHVVISDAFAAARRRLQDFVGKRQRR
    290 UniRef50_Q1PZB4        Putative uncharacterized pr...    55     6e-07  1  22.6%  3:95   5:108    --LEIVARDFDLTEANKADIHKYAEKLDAAYDRIIRCRVVVEALRHryNVKVVVTIPGTELVIKRknEDFHLAVKDSFNAMRRKLEdrSGKVKHH
    291 UniRef50_B4D6Y7        Putative sigma 54 modulatio...    55     6e-07  1  23.1%  4:94  13:109    ---HIVNRHLHPGVTVREKLAEKIAALshFPPDSIHLQVVLDkkKGLYEVRLTLRLPSNILHAEKTGTDLLVTINTAVNALKREVMSLKADLRG-
    292 UniRef50_D2QBL1        Putative uncharacterized pr...    55     6e-07  1  20.5%  2:84    9:95    -KIDLQTVGFNETTELVEQVESELRRIMRFRSDIVAADFYLREEgeNKLVRWRLGIPGNDLFAEGTGPSWAAGLRAAGDKLRRQ-----------
    293 UniRef50_C3RQU3        Predicted protein n=1 Tax=M...    55     7e-07  1  25.6%  1:90  44:133    MDISIRCK-ITMTEAMNEYLMNRFKKLNRY-KVLDNSRVSILVKPHEAAVKIqiSNKYGNFKVTTMASDYYTAVDLHIDKVKNKLCKIKE-----
    294 UniRef50_B2IF06        Cold-shock DNA-binding doma...    55     1e-06  1  25.3%  1:95   1:114    MEVqiDFQGFHPTEQQRALIEQKIAGLEEFYDRITACRVVMKAPSHHHRteVNIHleGREVVVeeRFSDPMFAINDAFSRARRRlrHIRGQVKVH
    295 UniRef50_A8V5D5        Putative uncharacterized pr...    54     1e-06  1  34.4% 32:92    8:73    -------------------------------EDSVNVRVTYDFEKHRHrvDIDIYFngGVIHAWEESNDLYTAIDFVVDEVERQLVRLKARR---
    296 UniRef50_A5FK95        Putative uncharacterized pr...    54     2e-06  1  18.9%  1:95   1:104    MKIQitDKNIEGHQRLEKYFSEELEklARFEDKITRIEVHFGDEnnDKKCVLEVRTAkqPITVTEHAETLEKAFNGALSKIKKSLTTTFEKLKAH
    297 UniRef50_C5CAR2        Ribosomal subunit interface...    54     2e-06  1  18.5%  1:81    3:89    MDVSYIARNISLSESFRDHVVERTERLQRLAEGADTLEVRVTKVSHRkrVELTVRGPRDVVRAEAAADDELAAFDKAAARL--------------
    298 UniRef50_Q1NMP5        Sigma 54 modulation protein...    53     2e-06  1  17.2%  1:93    1:98    MELQVEGRNLDIRQSWQDKIESEKARLLRHHAGLVhlRVSisHKSGGYEVRLVAAVPGETVVVNRKGESVRTLLGEAFDNLGLQLKELQRKRR--
    299 UniRef50_A6CVQ4        Putative uncharacterized pr...    53     3e-06  1  17.9%  1:95   1:101    MNIHFNTQSIVLSESMRSHCVTKADHLFAVHPQATEIFVSIIHHrgQYDVELKVHAEHQWCFVKHSGDEFyeAFSAMTHKLQKQKTKVKRELRDH
    300 UniRef50_UPI00016A5540 putative RNA polymerase, si...    53     4e-06  1  16.1%  1:93   1:102    MKTAISYRNIsaRPDLKGLIGNLLDrlSHFPAELVRLRATLERSGHryRARLRLGLPSTTLTCSDESPELGKALERSFAELERQLERHIAHLR--
    301 UniRef50_C5B5J5        Putative uncharacterized pr...    53     4e-06  1  20.4%  1:93   1:101    MNVIRSFRNLdaPEVIEEEVRQLEPHLARFREDLVRLEVVAsrGKTRIKVSLRLQLPSGVIAAREDGFEIEPVLRKAFADLRHQVDRHVARLK--
    302 UniRef50_B4CWD9        Putative uncharacterized pr...    52     5e-06  1  29.8% 10:66    1:63    ---------MAPSEAVTERVQKETEKLGKYFDRITSCSVVIehHGEPFHVRIELGVPGKELVVTQK-----------------------------
    303 UniRef50_Q73N60        Ribosomal subunit interface...    52     5e-06  1  23.4%  1:94    1:94    MNINIQAVKFTMDEDQKKYLDQKFKRIEYADNLITDIQCFIKLDK-KFIYDTTINFrgGTAHVSTENYEFEAGVNKMMDIADQKVKKEKDKVQE-
    304 UniRef50_C5CTR1        Ribosomal subunit interface...    52     5e-06  1  24.2%  1:95   1:104    MQIQvtSNGINNKDALERWADAEiqQLGRFVDDVTRVEVHLSDENHDkvMEARL-AHHQPLAVTQHATTLDEAFRGAADKLKRLLDNTLGRLNNH
    305 UniRef50_A7HIK3        Putative sigma 54 modulatio...    52     6e-06  1  18.3%  1:93   1:101    MKLSIHANHLSLPNDVMRFIEKHVTrlAryDDSAAELAVHfkKGGVDQACRLSFRMPgrTVHVESVEDDLYKALLDASERLKRHVRKQVDKMR--
    306 UniRef50_Q5P2J4        Putative uncharacterized pr...    52     7e-06  1  15.1%  1:93   1:100    MRIDLQCSGLEAPSGLRDYVARRMraIGRFRDQIQWARIKVarGGADKRCVVQLRLRnpDVIFSVTGTDARPLVDLAAERVSQVLVRRLARLR--
    307 UniRef50_D0SNV4        Ribosomal subunit interface...    51     1e-05  1  24.2%  1:95   1:104    MNIEitDKNIQGSERLISYVRAElqEFQRYSERITHFSVHISDEnhDKRCMIEARPAGMklAVTHKAANIDASIHGAIDKLKRSLEHLYEKKEHH
    308 UniRef50_Q1N2T1        Putative uncharacterized pr...    51     1e-05  1  20.4%  1:93   1:100    MKIIVNVRRLKISAELKKYIKRRLqaLGSRSDQIQRVEVVLskGGEDKHCRMLLKLEGhdVVIEDVDSEMQAVVDKAANRASLTVTKRLDRLR--
    309 UniRef50_Q48ML3        Ribosomal subunit interface...    51     1e-05  1  23.4%  1:94   1:103    MQIQVNsnHIESSIRLEEWVRTTVetLEHYDENLTRVEVHIRDEnhDIKCQMEARPKGHqiSVSHKADTVDQAVDGAAVKLDHALEHLFGKLRG-
    310 UniRef50_C6WEC1        Putative uncharacterized pr...    51     1e-05  1  28.9%  1:90   10:98    MQLSLARR---VPEAAREYAGVKIGCLGKYAPGEVpaMVRLSYDGPRrvAHGTLHVDGHAVNADAGAETFIEVVDLLQDRLKAQLVKMHG-----
    311 UniRef50_C1ZHK6        Putative uncharacterized pr...    51     1e-05  1  17.9%  1:95   1:102    MHTNLITRGLVLPQGLREFVDRKLeaLDRFQLSPADVEITLerGGQDKRCRLRvnTKRTRVLIEETGSDLQRVLSRTVDRMEQALAKLHRKHHSR
    312 UniRef50_Q6APA9        Similar to cold-shock prote...    50     2e-05  1  18.1%  1:94    1:99    MELKVETRNVDLRKSWQEKIDTESEKLIRHYAniLHLRVAIehKEGGYEVRLVASVPQDTVVVTRSGEVVRAVLTEAFDVLALQLKEIQRKKRK-
    313 UniRef50_B2UIV4        Ribosomal subunit interface...    50     2e-05  1  13.0%  3:94   5:103    --VDISFQGIPHSKAVEEAVIKHADRLKRIRADLMRCRVSlqHQGKPFDVNVHVFTPHQtiSSNTSNEDPYVALHEAFSHVERMLLEAGSKRSS-
    314 UniRef50_B2S0F3        Ribosome-associated factor ...    50     2e-05  1  27.5%  1:91    6:98    MEPKIQAINYHLSNSTKDFIIKKLEKLGTHIKQNSelKITIKKENDIFDIDAHLHFngKIIHIKEEGKELYHSIENLIERLQNTANKEKNK----
    315 UniRef50_Q21YM4        Putative uncharacterized pr...    48     1e-04  1  20.0%  1:85    1:94    MQIQitDHHIEGHEALAAWATGEVKslSRFSASVTRVEVHLSDENgdKRCVMEARVQgqPLAVTHNAPSLYLTVTGATEKLSRLI----------
    316 UniRef50_B9TBM2        Putative uncharacterized pr...    47     2e-04  1  50.0% 58:95    3:40    ---------------------------------------------------------GKTVYVESLSQDLYAAIDTLIDKLDRQVMKYKAKVQGH
    317 UniRef50_B1ZS48        Putative uncharacterized pr...    46     2e-04  1  21.0%  1:81    1:83    MKLSLKHVHVRPTDSLDSWVEEGLSTLRPLLA-IDEAHVRLEHdsPAYRVTVHLVVPGPDLRADAVDHTLRTAFAKVLGEL--------------
    318 UniRef50_B1C667        Putative uncharacterized pr...    44     0.002  1  22.0% 27:85   28:86    --------------------------LDKYFPKDPKANIMISEIRGLVTTEITVTVDSTFLRVEVSDRDVRNAADKAIEKLEAQI----------
    319 UniRef50_Q4KI21        Ribosomal subunit interface...    46     3e-04  1  22.8% 16:94    1:87    ---------------MEEWVRSTVetLERYEEDLTRVVVHLRDENGGkrCQLEARPKGHqvSVTHKADTLEQALDGATVKLESALEHMFGKLRG-
    320 UniRef50_Q11UA1        Putative uncharacterized pr...    46     4e-04  1  17.9%  1:95   1:104    MTIQftDKNVASNERTANYLSSMidSLDRFSEHITRIEVHLSDegDDKRCVLEARMEGKkfAVTNNADTIEKAVSGAIDKLTTTLEKNLERQRSY
    321 UniRef50_D0CFJ2        Ribosomal subunit interface...    45     0.001  1  20.9%  1:91   1:100    MNIEitDKNIHNSERLITYVRAElqEFQRHSERITHFSVHFSDENGDkhCMIEARPSgkPVAVHHKAGNIDASIHGAIEKLKRSLEHTFEK----
    322 UniRef50_Q12CA7        Ribosomal subunit interface...    44     0.001  1  18.1%  1:94   1:103    MQVQVNSNhiHTGEAFERWASTEldSLSRFKGDITRVEVHMSDDTGdrRCVMEARLSHHelSVNHHAPSQDEAFRGASDKLKRLIEHTLGKLRD-
    323 UniRef50_B4RFH3        Cold-shock DNA-binding doma...    43     0.002  1  27.6%  1:58    1:67    MQlqITFEglEPSEALKRRIEREAEKLERFHDRITSCRVAvrRHGDLYAVRLQITAPG-------------------------------------
    324 UniRef50_A9BQF4        Ribosomal subunit interface...    43     0.002  1  23.4%  1:94   1:104    MQVQVHADdiQGGESLAQWAQEEiaKLARFKDYVVRVEVFLtsGAPGKRCVLETRANgpPIAVNAEAEKVKDAFNAAIEKLKRAVETDLGKLKD-
    325 UniRef50_D0LQZ0        Putative uncharacterized pr...    43     0.003  1  20.4%  1:93   1:100    MHIQIRTQKLEVSDGLRELVRRRLraMDRFGDRVQRVTVRLarGGVDKHCRISVVTRsgVVVVEGTDESLPAVVTRAIERAVRALKRANARLK--
    326 UniRef50_B8EK85        Cold-shock protein DNA-bind...    43     0.004  1  22.6%  3:95   5:112    --LQIVFRDIQHSDALAKLIEDRARRLESAFSRITGCRVVAGAAHGATkvEVEVPGR-PMIVAKAEAkeQAALVNRVFDVAERRLEQlkDNVRRH
    327 UniRef50_B2UIT9        Putative uncharacterized pr...    42     0.005  1  16.5%  3:87    5:96    --LDISFRDFPYSKAIEDAVIEQANSLARFQAEIARCRVKLIQLPRQqrVHIDVMTRHDslSGHASGEDARAALREAFREVEFALRR--------
    328 UniRef50_Q0C2I5        Putative uncharacterized pr...    41     0.008  1  23.5%  1:85    1:95    MDFQftGNKVDGDARMDEHFETRfeRLERFEPRLSRIEVHVRDTDGTRriEAVipYNGEPLTASDKAGTPEAAVNAALQKLVTRL----------
    329 UniRef50_UPI00016C6947 putative sigma 54 modulatio...    41     0.010  1  17.0%  1:88    1:89    MDIKIIKKHneISKDIELAIHQKLNFLEVFLKENDYIKITVEQNKLSYKIELLLEYNKKIIKMNEVSGDFFSSLEKITNRLKRKLYKI-------
    330 UniRef50_C4RPJ2        Putative uncharacterized pr...    41     0.010  1  17.7% 17:95  25:109    ----------------RNWIAEQFarLAGFHADATELEVSVkrEARGQKVTLECWIAgqKIVTTSAEEDLHAALNDVRDDLRRRLNDAKTRQEPR
    331 UniRef50_B1ZSU6        Putative uncharacterized pr...    41     0.012  1  18.9%  2:91  12:106    -RVLVRAINFELDEPVRRATADKAVLLVRRHPLIEEICIELENDphEYVAKGRIDFGGPALLSSVTGGDATGTLNYLLEQLEHQLRKQRLR----
    332 UniRef50_D2R4D6        Putative uncharacterized pr...    41     0.016  1  20.2%  1:94   1:101    MRIVISNRRAAISKELYDFAERrlFALSRFAPRIEQVLVLLTDENgdQTCQLVIQlrGEQFTIRQCEATVEEAVSRAADAASRMVGRSMAKRRD-
    333 UniRef50_A4WZ74        Putative uncharacterized pr...    40     0.017  1  17.0%  1:94   1:103    MRIQitDDNIDGVDSLTSRFEAEIAelSRFSDQITAVEVHLSDEndDKRCLLEARPTgaPVAVRHQAATSDEALKGAVQKMQRKLQSELGRRNN-
    334 UniRef50_A8M1R1        Putative uncharacterized pr...    40     0.020  1  16.5% 17:95  25:109    ----------------RAWIADQfaRLAGFHADATELEVSVkrETRGQKVTLECWIAgqKIVTTSAEEDLHAALNDVRDDLRRRLNDAKTRQEPR
    335 UniRef50_B2UJI3        Putative uncharacterized pr...    40     0.029  1  11.9%  3:86  17:107    --VEILFSNLPQSDAIKAAITRFASRLDGFPCDIRRFRICLASDngPFLVHIEVDIPGRALTADEASddVHVALLNAFREMRARVR---------
    336 UniRef50_A8M8Q2        CBS domain containing prote...    40     0.031  1  16.3%  9:94 291:377    --------NNDAKPLIEKVINNHLEKISKLVNVVdkVDIRARDSGKRYEVTVRLKDDKELHTATAEDRDPVSAIREAMDKIMQSIIKNVSKARD-
    337 UniRef50_Q9Z7W7        Ribosomal protein S30AE n=5...    40     0.033  1  17.0%  2:95  22:113    -HVEITTKAFRLSMPLKQLILEKSDHL----PPMETIRVVLTSHKDKLGTEVHVVASHgiLQTKVHNANPYTAVINAFKKIRTMANKHSNKRKDR
    338 UniRef50_A8FWF6        Putative uncharacterized pr...    39     0.047  1  22.7%  1:88   1:102    MQIQvtDKNISGREALAQSVEDVlsDLSSFSDHITRIEVHLSDEDsdKRCLLEVRLAghPIAISEQAETIEEAVADavNMLETELVKH-------
    339 UniRef50_D2RTT7        CBS domain containing membr...    39     0.053  1  23.3%  1:90 271:367    MDVQIT--NISMLDTirEGIVENIEDvdKYQdqVQHAHVRF-KEHQEkhCQIRLRTNKGQIAGTGEGYGSENAFRVAIDKLERNVLEVKG-----
        consensus/100%                                                                                   ...............................................................................................
        consensus/90%                                                                                    ..h.h...tht.t.thpthh.tphttltph.....thpl.ht.tt....hph.h.h.t..h.spt.t.sh..shp.h.t.h.t.l.p........
        consensus/80%                                                                                    .pl.lphpphphstthcphhppchtpltph.tph.phplhhphpttt.hschpl.h.t..lhspttstsh.tulc.shpthtppl.+hhtp....
        consensus/70%                                                                                    Mplplps+phphspslcphlpp+hp+lp+ahsphhpspVhlphptpthpsclplth.s..lhsptpspshhsulc.shpclpcplp+hpp+ht..

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