Phyre 2 alignment of P0AFX0 with d2clyc1

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Job Description | P0AFX0
Confidence | 16.62% | Date | Thu Jan 5 11:27:28 GMT 2012
Rank | 15 | Aligned Residues | 23
% Identity | 17% | Template | d2clyc1
SCOP info | Mitochondrial ATP synthase coupling factor 6 | Mitochondrial ATP synthase coupling factor 6 | Mitochondrial ATP synthase coupling factor 6
Resolution | 2.8

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | E | I | T | E | A | L | R | E | F | V | T | A | K | F | A | K | L | E | Q | Y | F | D
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Template Sequence |  | V | D | A | G | P | E | Y | Q | Q | D | L | D | R | E | L | F | K | L | K | Q | M | Y | G
Template Known Secondary structure |  | S | S |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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