Phyre 2 alignment of P0AFX0 with c3gquA_

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Job Description | P0AFX0
Confidence | 3.42% | Date | Thu Jan 5 11:27:28 GMT 2012
Rank | 85 | Aligned Residues | 22
% Identity | 23% | Template | c3gquA_
PDB info | PDB header:rna binding protein | Chain: A: PDB Molecule:nop5p protein; | PDBTitle: pyrococcus horikoshii nop5 rna binding domain
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | I | T | E | A | L | R | E | F | V | T | A | K | F | A | K | L | E | Q | Y | F | D | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | A | E | E | L | K | K | E | L | E | A | R | I | K | E | I | K | E | K | Y | P | R
Template Known Secondary structure |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 352 | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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