Phyre 2 Results for P0AFX0

Email | l.a.kelley@imperial.ac.uk
Description | P0AFX0
Date | Thu Jan 5 11:27:28 GMT 2012
Unique Job ID | a8714bc830adab46

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2rqlA_ |
|  | 100.0 | 100 | PDB header:translation Chain: A: PDB Molecule:probable sigma-54 modulation protein; PDBTitle: solution structure of the e. coli ribosome hibernation2 promoting factor hpf
2 | d1imua_ |
|  | 100.0 | 34 | Fold:Ribosome binding protein Y (YfiA homologue) Superfamily:Ribosome binding protein Y (YfiA homologue) Family:Ribosome binding protein Y (YfiA homologue)
3 | c3tqmD_ |
|  | 99.9 | 33 | PDB header:protein binding Chain: D: PDB Molecule:ribosome-associated factor y; PDBTitle: structure of an ribosomal subunit interface protein from coxiella2 burnetii
4 | d1l4sa_ |
|  | 99.9 | 38 | Fold:Ribosome binding protein Y (YfiA homologue) Superfamily:Ribosome binding protein Y (YfiA homologue) Family:Ribosome binding protein Y (YfiA homologue)
5 | d2ywqa1 |
|  | 99.9 | 33 | Fold:Ribosome binding protein Y (YfiA homologue) Superfamily:Ribosome binding protein Y (YfiA homologue) Family:Ribosome binding protein Y (YfiA homologue)
6 | d1sr9a3 |
|  | 24.2 | 22 | Fold:2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Superfamily:2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Family:2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
7 | c3f6hA_ |
|  | 23.6 | 21 | PDB header:transferase Chain: A: PDB Molecule:alpha-isopropylmalate synthase; PDBTitle: crystal structure of the regulatory domain of licms in2 complexed with isoleucine - type iii
8 | d1uila_ |
|  | 21.7 | 24 | Fold:dsRBD-like Superfamily:dsRNA-binding domain-like Family:Double-stranded RNA-binding domain (dsRBD)
9 | c3kxeD_ |
|  | 19.9 | 18 | PDB header:protein binding Chain: D: PDB Molecule:antitoxin protein pard-1; PDBTitle: a conserved mode of protein recognition and binding in a2 pard-pare toxin-antitoxin complex
10 | c1i7nA_ |
|  | 19.7 | 13 | PDB header:neuropeptide Chain: A: PDB Molecule:synapsin ii; PDBTitle: crystal structure analysis of the c domain of synapsin ii2 from rat brain
11 | c2kxoA_ |
|  | 19.2 | 10 | PDB header:cell cycle Chain: A: PDB Molecule:cell division topological specificity factor; PDBTitle: solution nmr structure of the cell division regulator mine protein2 from neisseria gonorrhoeae
12 | c1by0A_ |
|  | 18.9 | 41 | PDB header:rna binding protein Chain: A: PDB Molecule:protein (hepatitis delta antigen); PDBTitle: n-terminal leucine-repeat region of hepatitis delta antigen
13 | c1pk8D_ |
|  | 18.0 | 9 | PDB header:membrane protein Chain: D: PDB Molecule:rat synapsin i; PDBTitle: crystal structure of rat synapsin i c domain complexed to2 ca.atp
14 | c2yh5A_ |
|  | 17.6 | 12 | PDB header:lipid binding protein Chain: A: PDB Molecule:dapx protein; PDBTitle: structure of the c-terminal domain of bamc
15 | d2clyc1 |
|  | 16.6 | 17 | Fold:Mitochondrial ATP synthase coupling factor 6 Superfamily:Mitochondrial ATP synthase coupling factor 6 Family:Mitochondrial ATP synthase coupling factor 6
16 | d2r85a2 |
|  | 12.3 | 8 | Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:PurP ATP-binding domain-like
17 | d2hkja2 |
|  | 12.2 | 23 | Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:DNA gyrase/MutL, second domain
18 | d1vzsa_ |
|  | 11.0 | 20 | Fold:Mitochondrial ATP synthase coupling factor 6 Superfamily:Mitochondrial ATP synthase coupling factor 6 Family:Mitochondrial ATP synthase coupling factor 6
19 | c3r9jD_ |
|  | 11.0 | 9 | PDB header:cell cycle,hydrolase/cell cycle Chain: D: PDB Molecule:cell division topological specificity factor; PDBTitle: 4.3a resolution structure of a mind-mine(i24n) protein complex
20 | c1mx0D_ |
|  | 10.8 | 23 | PDB header:isomerase Chain: D: PDB Molecule:type ii dna topoisomerase vi subunit b; PDBTitle: structure of topoisomerase subunit
21 | c2p0aA_ |
| not modelled | 10.2 | 17 | PDB header:neuropeptide Chain: A: PDB Molecule:synapsin-3; PDBTitle: the crystal structure of human synapsin iii (syn3) in complex with2 amppnp
22 | d2e9xd1 |
| not modelled | 9.8 | 20 | Fold:GINS helical bundle-like Superfamily:GINS helical bundle-like Family:SLD5 N-terminal domain-like
23 | c3r23B_ |
| not modelled | 9.7 | 18 | PDB header:ligase Chain: B: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis
24 | d1hk8a_ |
| not modelled | 9.6 | 16 | Fold:PFL-like glycyl radical enzymes Superfamily:PFL-like glycyl radical enzymes Family:Class III anaerobic ribonucleotide reductase NRDD subunit
25 | c1hk8A_ |
| not modelled | 9.6 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:anaerobic ribonucleotide-triphosphate reductase; PDBTitle: structural basis for allosteric substrate specificity2 regulation in class iii ribonucleotide reductases:3 nrdd in complex with dgtp
26 | c3l2iB_ |
| not modelled | 9.2 | 15 | PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2.
27 | d1o6da_ |
| not modelled | 8.9 | 10 | Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like
28 | c3ehuA_ |
| not modelled | 8.3 | 19 | PDB header:membrane protein Chain: A: PDB Molecule:fusion protein of crfr1 extracellular domain and mbp; PDBTitle: crystal structure of the extracellular domain of human corticotropin2 releasing factor receptor type 1 (crfr1) in complex with crf
29 | d1sfla_ |
| not modelled | 8.2 | 24 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase
30 | d1gsoa3 |
| not modelled | 8.2 | 5 | Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:BC ATP-binding domain-like
31 | d2i52a1 |
| not modelled | 8.1 | 5 | Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like
32 | c3q2oB_ |
| not modelled | 7.6 | 15 | PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; PDBTitle: crystal structure of purk: n5-carboxyaminoimidazole ribonucleotide2 synthetase
33 | c3rd6A_ |
| not modelled | 7.5 | 13 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mll3558 protein; PDBTitle: crystal structure of mll3558 protein from rhizobium loti. northeast2 structural genomics consortium target id mlr403
34 | c1hf9B_ |
| not modelled | 7.4 | 31 | PDB header:atpase inhibitor Chain: B: PDB Molecule:atpase inhibitor (mitochondrial); PDBTitle: c-terminal coiled-coil domain from bovine if1
35 | d1lr0a_ |
| not modelled | 7.4 | 12 | Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TolA
36 | c2yr1B_ |
| not modelled | 6.7 | 21 | PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of 3-dehydroquinate dehydratase from geobacillus2 kaustophilus hta426
37 | d2r7ka2 |
| not modelled | 6.5 | 12 | Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:PurP ATP-binding domain-like
38 | d1xppa_ |
| not modelled | 6.1 | 13 | Fold:DCoH-like Superfamily:RBP11-like subunits of RNA polymerase Family:RBP11/RpoL
39 | c1q0vA_ |
| not modelled | 6.0 | 19 | PDB header:transport binding Chain: A: PDB Molecule:hydrophilic protein; has cysteine rich putative PDBTitle: solution structure of tandem uims of vps27
40 | d1ehia2 |
| not modelled | 6.0 | 12 | Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:ATP-binding domain of peptide synthetases
41 | c3e5nA_ |
| not modelled | 5.9 | 18 | PDB header:ligase Chain: A: PDB Molecule:d-alanine-d-alanine ligase a; PDBTitle: crystal strucutre of d-alanine-d-alanine ligase from2 xanthomonas oryzae pv. oryzae kacc10331
42 | c2l5gB_ |
| not modelled | 5.9 | 30 | PDB header:transcription regulator Chain: B: PDB Molecule:putative uncharacterized protein ncor2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207
43 | c1a92B_ |
| not modelled | 5.9 | 35 | PDB header:leucine zipper Chain: B: PDB Molecule:delta antigen; PDBTitle: oligomerization domain of hepatitis delta antigen
44 | c2l9pA_ |
| not modelled | 5.7 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of q5hli9 from staphylococcus epidermidis,2 northeast structural genomics consortium target ser147
45 | c1g6uB_ |
| not modelled | 5.7 | 23 | PDB header:de novo protein Chain: B: PDB Molecule:domain swapped dimer; PDBTitle: crystal structure of a domain swapped dimer
46 | c1ulzA_ |
| not modelled | 5.7 | 10 | PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase
47 | d1ghha_ |
| not modelled | 5.6 | 12 | Fold:DNA damage-inducible protein DinI Superfamily:DNA damage-inducible protein DinI Family:DNA damage-inducible protein DinI
48 | c3oqvA_ |
| not modelled | 5.4 | 11 | PDB header:protein binding Chain: A: PDB Molecule:albc; PDBTitle: albc, a cyclodipeptide synthase from streptomyces noursei
49 | c2q2eB_ |
| not modelled | 5.3 | 27 | PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei