205 c3rfaA_ Probab=69.25   E-value=7.7  Score=18.04  Aligned_columns=131  Identities=8%

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCC------------CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             9499973668898989999999980999899971474------------3343358987899999999871986999964
Q batch____         1 MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRP------------HAFAPDLKAGGIKQIKALAQTYQMPIIGYTP   68 (276)
Q Consensus         1 mk~g~~t~~~~~~~l~~~l~~~~~~G~~~iEl~~~~~------------~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~   68 (276)
                      +.++..+.+....-+.+.+..+++.+...+.+....+            ..+..+---..++++.+...+.|+++.....
T Consensus       185 l~i~~~~itvst~g~~~~i~~L~~~~~~~l~isl~a~~~e~r~~l~p~~k~~~l~~i~~~~~~~~~~~~~~g~~v~i~y~  264 (333)
T c3rfaA_         185 FGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYV  264 (333)
T ss_dssp             TCCCGGGEEEEESCCHHHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEE
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             24301121015755417899987315848998067798778623140678889999999999999977643980899855


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             5667768766799899999999999999998872898999947778889998999999999999999989873988999
Q batch____        69 ETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLIL  147 (276)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gi~l~l  147 (276)
                      ...+.+-            +.+.+++.+++++.+++ .|.+.|.++.++.+..   .--.+.+.++.+.+++.|+.+.+
T Consensus       265 li~g~nD------------s~e~a~~l~~~l~~~~~-~Vnlip~nP~~g~~~~---~p~~e~i~~f~~~L~~~Gi~v~i  327 (333)
T c3rfaA_         265 MLDHVND------------GTEHAHQLAELLKDTPC-KINLIPWNPFPGAPYG---RSSNSRIDRFSKVLMSYGFTTIV  327 (333)
T ss_dssp             EBTTTTC------------SHHHHHHHHHHTTTSCE-EEEEEECCCCTTCCCC---BCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             ECCCCCC------------CHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCC---CCCHHHHHHHHHHHHHCCCEEEE
T ss_conf             4089998------------98999999999850898-7999962468888877---88989999999999978986997