235 c3fluD_ Probab=63.45   E-value=10  Score=17.36  Aligned_columns=130  Identities=12%

Q ss_pred             CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH-------------
Q ss_conf             9989997147433433589878999999998719869999645667768766799899999999999-------------
Q batch____        27 YDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIK-------------   93 (276)
Q Consensus        27 ~~~iEl~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   93 (276)
                      +.||=.....+.....+++....++..+.+.+.|+.-..+.    +..+-..+-+.++|++.++...             
T Consensus         4 l~Gv~~~~~TPf~~dg~iD~~~~~~~~~~l~~~Gv~gi~~~----G~tGE~~~Ls~~Er~~i~~~~~~~~~~~~~vi~gv   79 (293)
T c3fluD_           4 LQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAV----GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT   79 (293)
T ss_dssp             CCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEES----STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred             CEEECCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC----CCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             02200120078189888488999999999997799899987----72357021799999999999999608997399965


Q ss_pred             ---------HHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH
Q ss_conf             ---------99999887289899994777888999899999999999999998987398899985698677301699999
Q batch____        94 ---------LAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCNANDV  164 (276)
Q Consensus        94 ---------~~i~~a~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gi~l~lE~~~~~~~~~~~~~~~~  164 (276)
                               +.++.|+.+|+..+.+.+........     +.+.+.++++++..   ++.+.+.|.+.. ....-+++.+
T Consensus        80 ~~~~~~~~i~~a~~a~~~Gad~v~~~pP~~~~~s~-----~~i~~~~~~ia~~~---~~pi~~Yn~P~~-tg~~~s~~~~  150 (293)
T c3fluD_          80 GANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQ-----EGIYQHFKTIAEAT---SIPMIIYNVPGR-TVVSMTNDTI  150 (293)
T ss_dssp             CCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH-----HHHHHHHHHHHHTC---CSCEEEEECHHH-HSSCCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH-----HHHHHHHHHHHHHC---CCCEEEEECCCC-CCCCCCHHHH
T ss_conf             88999999999999985499899993887889998-----89999999999754---998999967533-3677598999


Q ss_pred             HHHHH
Q ss_conf             99997
Q batch____       165 LHALA  169 (276)
Q Consensus       165 ~~~~~  169 (276)
                      .++.+
T Consensus       151 ~~L~~  155 (293)
T c3fluD_         151 LRLAE  155 (293)
T ss_dssp             HHHTT
T ss_pred             HHHHC
T ss_conf             99834