Job Description P15033 Confidence 4.29% Date Thu Jan 5 11:34:19 GMT 2012 Rank 39 Aligned Residues 36 % Identity 39% Template c2wcrB_ PDB info PDB header:immune system Chain: B: PDB Molecule:tnf-alpha inducer protein; PDBTitle: crystal structure of tip-alpha n34 (hp0596) from2 helicobacter pylori at ph8 Resolution 1.70 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	G	Y	V	I	K	T	E	N	K	E	T	P	F	T	V	V	D	I	D	G	P	S	G	N	V	K	T	L	D	E	G	V	K	K	M	C	L
Query Conservation
Alig confidence															.										.	.
Template Conservation															.										.	.
Template Sequence		R	L	G	I	Y	I	N	P	N	N	E	E	V	.	F	A	L	V	R	A	R	G	F	.	.	D	K	D	A	L	S	E	G	L	H	K	M	S	L
Template Known Secondary structure									T	T	T	T			.										.	.												T	T
Template Predicted Secondary structure															.										.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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