Phyre 2 alignment of P04079 with c3gnnA_

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Job Description | P04079
Confidence | 33.54% | Date | Thu Jan 5 10:58:10 GMT 2012
Rank | 318 | Aligned Residues | 44
% Identity | 25% | Template | c3gnnA_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; | PDBTitle: crystal structure of nicotinate-nucleotide2 pyrophosphorylase from burkholderi pseudomallei
Resolution | 2.25 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | W | T | P | A | K | I | I | D | D | A | V | A | R | I | R | E | Q | V | G | D | D | K | V | I | L | G | L | S | G | G | V | D | S | S | V | T | A | M | L | L | H | R | A | I | G | K | N | L | T | C | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template Sequence |  | N | F | T | L | D | . | M | M | R | D | A | V | R | V | T | E | . | . | . | . | . | G | R | A | V | L | E | V | S | G | G | V | N | F | D | T | V | R | A | I | A | E | T | . | . | G | V | D | R | I | S | I
Template Known Secondary structure |  | S |  |  |  |  | . |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | T | S |  |  |  |  |  |  | S | S |  | S | T | T | T |  |  |  |  |  |  | T | . | . | T |  | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 233 | . | . | . | . |  | . | . | 240 | . | . | . | . | . | . | . |  |  |  |  |  | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |  |  | 270 | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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