Phyre 2 alignment of P04079 with c3se7A_

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Job Description | P04079
Confidence | 27.02% | Date | Thu Jan 5 10:58:10 GMT 2012
Rank | 381 | Aligned Residues | 34
% Identity | 18% | Template | c3se7A_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:vana; | PDBTitle: ancient vana
Resolution | 3.07 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | H | K | H | R | I | L | I | L | D | F | G | S | Q | . | . | . | . | . | . | . | . | . | Y | T | Q | L | V | A | R | R | V | R | E | L | G | V | Y | C | E | L | W | A | W | D
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Template Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | H | M | K | I | G | I | I | . | F | G | G | V | S | E | E | H | D | I | S | V | K | S | A | R | E | V | A | T | H | L | G | T | G | V | F | E | P | F | Y | L | G | I | T
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  | T | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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