Phyre 2 alignment of P04079 with c2rkbE_

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Job Description | P04079
Confidence | 34.87% | Date | Thu Jan 5 10:58:10 GMT 2012
Rank | 305 | Aligned Residues | 27
% Identity | 22% | Template | c2rkbE_
PDB info | PDB header:lyase | Chain: E: PDB Molecule:serine dehydratase-like; | PDBTitle: serine dehydratase like-1 from human cancer cells
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 226 | . | . | . | 230 | . | . | . | . | . | . | . |  |  | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | G | D | D | K | V | I | L | G | L | S | G | G | . | . | V | D | S | S | V | T | A | M | L | L | H | R | A | I | G | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
Template Sequence |  | S | L | T | S | V | V | V | I | V | C | G | G | N | N | I | N | S | R | E | L | Q | A | L | K | T | H | L | . | G | Q
Template Known Secondary structure |  | S |  | S |  |  |  |  |  |  |  | B |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |  | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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