Phyre 2 alignment of P04079 with d1pjqa3

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Job Description | P04079
Confidence | 51.73% | Date | Thu Jan 5 10:58:10 GMT 2012
Rank | 219 | Aligned Residues | 23
% Identity | 35% | Template | d1pjqa3
SCOP info | Siroheme synthase middle domains-like | Siroheme synthase middle domains-like | Siroheme synthase middle domains-like
Resolution | 2.21

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | K | V | I | L | G | L | S | G | G | V | D | S | S | V | T | A | M | L | L | H | R | A | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | P | L | M | V | A | V | S | G | G | T | . | S | P | V | L | A | R | L | L | R | E | K | L
Template Known Secondary structure |  | T | T |  |  |  |  |  |  |  |  | S | . |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 120 | . | . | . | . | . | . | . | . | . | 130 |  | . | . | . | . | . | . | . | . | . | 140 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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