17/01/2012 11:38:53 : INFO  : Run start: Tue Jan 17 11:38:50 GMT 2012
17/01/2012 11:39:04 : INFO  : Initialised job
17/01/2012 11:39:08 : INFO  : Renaming log file 'phyre2_20120117_113849.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/a7e34c163093f4fe/phyre_20120117_113849.log'
17/01/2012 11:39:10 : INFO  : Initialised job:
Sequence
>batch____
MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGP
ESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSA
LVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFITVASTESCPFAIMANEEKRFYGVQF
HPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVARIREQVGDDKVILGLSGGVDS
SVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAG
ENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHN
VGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEY
CDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF
MTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE

17/01/2012 11:39:13 : INFO  : Checked sequence
17/01/2012 11:39:19 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 11:39:22 : INFO  : PSI-BLAST 3 iterations
17/01/2012 11:41:52 : INFO  : PSI-BLAST 5 iterations
17/01/2012 11:45:15 : INFO  : Finished PSI-BLAST
17/01/2012 11:45:21 : INFO  : Running Buildali to generate a3m file
17/01/2012 12:05:02 : INFO  : Converting to HMM
17/01/2012 12:05:13 : INFO  : Calibrating HMM
17/01/2012 12:05:41 : INFO  : Searching HMM database
17/01/2012 12:14:52 : INFO  : Finished buildali
17/01/2012 12:14:56 : INFO  : Predicting secondary structure
17/01/2012 12:15:12 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 12:15:15 : INFO  : Predicting Disordered regions
17/01/2012 12:15:24 : INFO  : Predicted Disorder (Disopred)
17/01/2012 12:15:27 : INFO  : Running memsat_svm check
17/01/2012 12:21:28 : INFO  : Running memsat_svm full
17/01/2012 12:27:34 : INFO  : Predicted Transmembrane (memsat_svm) ID 'a7e34c163093f4fe'
17/01/2012 12:27:38 : INFO  : Initialising fold library search
17/01/2012 12:27:44 : INFO  : Initialised search input
17/01/2012 12:27:49 : INFO  : Building Ensemble models
17/01/2012 12:27:55 : INFO  : Building hh.c1gpmD_.model.1.pdb
17/01/2012 12:28:24 : INFO  : Building c1gpmD_.1.pdb
17/01/2012 12:28:52 : INFO  : Building c2vxoB_.2.pdb
17/01/2012 12:29:19 : INFO  : Building c3uowB_.3.pdb
17/01/2012 12:29:48 : INFO  : Building c2ywcC_.4.pdb
17/01/2012 12:30:20 : INFO  : Building c3tqiB_.5.pdb
17/01/2012 12:30:51 : INFO  : Building c2dplA_.6.pdb
17/01/2012 12:31:22 : INFO  : Building d1gpma3.7.pdb
17/01/2012 12:31:51 : INFO  : Building d1gpma2.8.pdb
17/01/2012 12:32:21 : INFO  : Building c2vpiA_.9.pdb
17/01/2012 12:32:51 : INFO  : Building d1wl8a1.10.pdb
17/01/2012 12:33:21 : INFO  : Building c1keeH_.11.pdb
17/01/2012 12:33:56 : INFO  : Building d2a9va1.12.pdb
17/01/2012 12:34:27 : INFO  : Building d1i7qb_.13.pdb
17/01/2012 12:35:00 : INFO  : Building c3r74B_.14.pdb
17/01/2012 12:35:35 : INFO  : Building d1qdlb_.15.pdb
17/01/2012 12:36:13 : INFO  : Building d1a9xb2.16.pdb
17/01/2012 12:36:46 : INFO  : Building d1gpma1.17.pdb
17/01/2012 12:37:17 : INFO  : Building d1i1qb_.18.pdb
17/01/2012 12:37:50 : INFO  : Building c1jvnB_.19.pdb
17/01/2012 12:38:22 : INFO  : Building c3q4gA_.20.pdb
17/01/2012 12:39:29 : INFO  : Finished HH model building
17/01/2012 12:39:32 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 12:40:47 : INFO  : html domain output complete ID 'a7e34c163093f4fe'
17/01/2012 13:55:58 : INFO  : Run end  : Tue Jan 17 13:55:56 GMT 2012
