21 c3qraA_ Probab=88.07   E-value=1.2  Score=20.16  Aligned_columns=129  Identities=11%

Q ss_pred             ECCCCCCEEEEEEEEEEEECCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEE---E
Q ss_conf             0244211001334568860895999999999879823567766557862466586589999999737977999999---9
Q batch____       541 NAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEA---R  617 (700)
Q Consensus       541 ~~~~~~~~g~e~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~l~~~p~~~~~~~~~y~~~~~~~~~~~~---~  617 (700)
                      ........|+.+...+++.+.|.+.++|++.................        ..+.+...|.+.+.|.+-+.+   .
T Consensus        21 ~~~~~~~~g~~l~~gY~f~~~~gvE~~y~~~~~~~~~~~~~~~~~~~--------~s~~~~~~~~~~~~~~~Y~~~G~~~   92 (152)
T c3qraA_          21 YKLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESVLIDGDFKY--------YSVTAGPVFRINEYVSLYGLLGAGH   92 (152)
T ss_dssp             SCCBCCCEEEEEEEEEESSSSEEEEEEEEEEEECCCCCCCCEEEEEE--------EEEEEEEEEECSSSEEEEEEEEEEE
T ss_pred             CCCCCCCCEEEEEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEE--------EEEEEEEEEECCCCEEEEEEEEEEE
T ss_conf             66667651289998444035524899997115665543011478889--------9999898753467568999987799


Q ss_pred             EEEEEEECCCCCEEECCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCEEEECCCCEEEEEEEEEE
Q ss_conf             99346512678677588889998999984688605999999992456504544430466540254369817999999998
Q batch____       618 YMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYEPSPGRNYGVGMNIAW  697 (700)
Q Consensus       618 y~~~~~~~~~~~~~~~~y~~~dl~~~y~~~~~~~~~~l~~~v~Nl~d~~y~~~~~~~~~~~~~~~~~~gR~~~~~~~~~F  697 (700)
                      +.-+................+-+.+.|.+.+   +|.+.+..+-......-..                 ++.+++.|+|
T Consensus        93 ~~~~~~~~~~~~s~~~~~~~~G~G~~y~~~~---~~~~~~eY~~~~~~~~d~~-----------------~~~lGv~Y~F  152 (152)
T c3qraA_          93 GKAKFSSFGQSESRSKTSLAYGAGLQFNPHP---NFVIDASYEYSKLDDVKVG-----------------TWMLGAGYRF  152 (152)
T ss_dssp             EEEEEECCCCEEEEEEEEEEEEEEEEECSST---TEEEEEEEEEEEETTEEEE-----------------EEEEEEEEEC
T ss_pred             EEEEEECCCCCCCCCCCEEEEEEEEEEECCC---CEEEEEEEEEEECCCCCEE-----------------EEEEEEEEEC
T ss_conf             9999703666654333203789999980367---6899999999505874020-----------------7999999859