54 c3n8hA_ Probab=97.75   E-value=0.0012  Score=38.64  Aligned_columns=122  Identities=19%

Q ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC--------CCCCCCCHHHHHHHHHHHHCCCCCEEEEECC--
Q ss_conf             249998059985688999999999996898999811485--------4388889899999999996389979998074--
Q batch____         2 QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP--------SKKPMFTLEERVALAQQATAHLGNVEVVGFS--   71 (159)
Q Consensus         2 ~ki~i~~GsFdP~H~GH~~l~~~a~~~~d~v~v~~~~~~--------~k~~~~~~~~R~~m~~~a~~~~~~i~v~~~e--   71 (159)
                      ++||+. .+---+|.||+.|+++|++.+|.++|.++.||        .++++-+.+.-+++++.+  +.+-+.+-+.+  
T Consensus        22 ~~vg~V-PTMGaLH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~eD~~~YPR~l~~D~~ll~~~--gvD~vF~P~~~em   98 (263)
T c3n8hA_          22 QKIGFV-PTXGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASL--DVDVLFNPSEKDI   98 (263)
T ss_dssp             SCEEEE-EECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHT--TCSEEECCCHHHH
T ss_pred             CCEEEE-CCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHC--CCCEEEECCHHHH
T ss_conf             958997-5897325899999999998689299998527012788346564699989999999976--9989992886782


Q ss_pred             --------------------------------CHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             --------------------------------447999997089799963300002688899999999831589869995
Q batch____        72 --------------------------------DLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLM  119 (159)
Q Consensus        72 --------------------------------~~~~~~~~~~~~~~~v~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  119 (159)
                                                      +-....+...++....-|.   +||+.......+.+++.-..+.+-.+
T Consensus        99 YP~g~~~~v~~~~~l~~~leG~~RPghF~GV~Tvv~KLfniv~P~~a~fGe---KD~QQl~iir~mv~dL~~~v~I~~~p  175 (263)
T c3n8hA_          99 YPDGNLLRIEPKLEIANILEGKSRPGHFSGXLTVVLKLLQITKPNNLYLGE---KDYQQVXLIKQLVKDFFINTKIIVCP  175 (263)
T ss_dssp             CTTCSCSCCCCCSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEET---TSHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred             CCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEC---CCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             889971388616320001268899871123699999986312898879703---32999999999997418860687620


Q ss_pred             CCCCCCC--CCH
Q ss_conf             2777256--688
Q batch____       120 PSKEWSF--ISS  129 (159)
Q Consensus       120 ~~~~~~~--iSS  129 (159)
                      .-....+  .||
T Consensus       176 tvRe~dGLAlSS  187 (263)
T c3n8hA_         176 TQRQPSGLPLSS  187 (263)
T ss_dssp             CCBCTTSCBCCG
T ss_pred             EEECCCCEEEEH
T ss_conf             024478704100