 |
| Job Description | P0AFL9 | | Confidence | 23.51% | Date | Thu Jan 5 11:26:42 GMT 2012 |
| Rank | 164 | Aligned Residues | 25 |
| % Identity | 20% | Template | c1nuiA_ |
| PDB info |
PDB header:replication | Chain: A: PDB Molecule:dna primase/helicase; |
PDBTitle: crystal structure of the primase fragment of bacteriophage t7 primase-2 helicase protein
|
| Resolution | 2.90 Å |
|
|   |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
C | S | Q | C | D | M | L | V | A | L | P | R | L | E | H | G | Q | K | A | A | C | P | R | C | G | T |
| Query Conservation |   |
|   |   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |
|
|   |   | . |
|   |   |   |
|   |   |
|
|   |   |   |
|
|   |
|
|   |
| Template Sequence |   |
C | D | N | C | G | S | S | . |
D | G | N | S | L | F | S | D | G | H | T | F | C | Y | V | C | E | K |
| Template Known Secondary structure |   |
| S | S | S |
|
| S | . | S |
|  |  |  |  | T | T | S |
|  |  |  | T | T | T |
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
| . |
|
|  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
17 | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|