16/01/2012 19:31:34 : INFO  : Run start: Mon Jan 16 19:31:33 GMT 2012
16/01/2012 19:31:39 : INFO  : Initialised job
16/01/2012 19:31:41 : INFO  : Renaming log file 'phyre2_20120116_193133.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/a757ecfc1abed764/phyre_20120116_193133.log'
16/01/2012 19:31:42 : INFO  : Initialised job:
Sequence
>batch____
MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFS
LESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHS
SVYCSILEALEQGASGVKSGC

16/01/2012 19:31:43 : INFO  : Checked sequence
16/01/2012 19:31:46 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 19:31:48 : INFO  : PSI-BLAST 3 iterations
16/01/2012 19:33:27 : INFO  : PSI-BLAST 5 iterations
16/01/2012 19:35:37 : INFO  : Finished PSI-BLAST
16/01/2012 19:35:40 : INFO  : Running Buildali to generate a3m file
16/01/2012 19:48:12 : INFO  : Converting to HMM
16/01/2012 19:48:15 : INFO  : Calibrating HMM
16/01/2012 19:48:25 : INFO  : Searching HMM database
16/01/2012 19:52:00 : INFO  : Finished buildali
16/01/2012 19:52:01 : INFO  : Predicting secondary structure
16/01/2012 19:52:10 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 19:52:12 : INFO  : Predicting Disordered regions
16/01/2012 19:52:16 : INFO  : Predicted Disorder (Disopred)
16/01/2012 19:52:18 : INFO  : Running memsat_svm check
16/01/2012 19:54:10 : INFO  : Globular protein
16/01/2012 19:54:11 : INFO  : Predicted Transmembrane (memsat_svm) ID 'a757ecfc1abed764'
16/01/2012 19:54:12 : INFO  : Initialising fold library search
16/01/2012 19:54:15 : INFO  : Initialised search input
16/01/2012 19:54:17 : INFO  : Building Ensemble models
16/01/2012 19:54:21 : INFO  : Building hh.d1q06a_.model.1.pdb
16/01/2012 19:54:34 : INFO  : Building hh.c3gp4B_.model.2.pdb
16/01/2012 19:54:45 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a757ecfc1abed764/hh.c3gp4B_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a757ecfc1abed764/c3gp4B_.3.pdb
16/01/2012 19:54:48 : INFO  : Building hh.c2vz4A_.model.3.pdb
16/01/2012 19:54:59 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a757ecfc1abed764/hh.c2vz4A_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a757ecfc1abed764/c2vz4A_.10.pdb
16/01/2012 19:55:02 : INFO  : Building d1q06a_.1.pdb
16/01/2012 19:55:15 : INFO  : Building c2zhhA_.2.pdb
16/01/2012 19:55:28 : INFO  : Building c3gp4B_.3.pdb
16/01/2012 19:55:40 : INFO  : Building c3hh0C_.4.pdb
16/01/2012 19:55:54 : INFO  : Building c3gpvA_.5.pdb
16/01/2012 19:56:06 : INFO  : Building c3d6zA_.6.pdb
16/01/2012 19:56:20 : INFO  : Building d1r8da_.7.pdb
16/01/2012 19:56:33 : INFO  : Building c3qaoA_.8.pdb
16/01/2012 19:56:47 : INFO  : Building d1r8ea1.9.pdb
16/01/2012 19:57:01 : INFO  : Building c2vz4A_.10.pdb
16/01/2012 19:57:13 : INFO  : Building c2jmlA_.11.pdb
16/01/2012 19:57:26 : INFO  : Building c2dg6A_.12.pdb
16/01/2012 19:57:39 : INFO  : Building d1q08a_.13.pdb
16/01/2012 19:57:53 : INFO  : Building c2ev2B_.14.pdb
16/01/2012 19:58:06 : INFO  : Building c3ezfA_.15.pdb
16/01/2012 19:58:19 : INFO  : Building c1u78A_.16.pdb
16/01/2012 19:58:33 : INFO  : Building c1z4hA_.17.pdb
16/01/2012 19:58:45 : INFO  : Building c1hlvA_.18.pdb
16/01/2012 19:59:01 : INFO  : Building d1j9ia_.19.pdb
16/01/2012 19:59:15 : INFO  : Building d1stza1.20.pdb
16/01/2012 20:00:11 : INFO  : Finished HH model building
16/01/2012 20:00:12 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 20:01:01 : INFO  : html domain output complete ID 'a757ecfc1abed764'
16/01/2012 20:11:37 : INFO  : Run end  : Mon Jan 16 20:11:36 GMT 2012
