Phyre 2 alignment of P0ACS5 with c2v79B_

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Job Description | P0ACS5
Confidence | 41.45% | Date | Thu Jan 5 11:18:54 GMT 2012
Rank | 388 | Aligned Residues | 39
% Identity | 5% | Template | c2v79B_
PDB info | PDB header:dna-binding protein | Chain: B: PDB Molecule:dna replication protein dnad; | PDBTitle: crystal structure of the n-terminal domain of dnad from2 bacillus subtilis
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | Y | R | I | G | E | L | A | K | M | A | E | V | T | P | D | T | I | R | Y | Y | . | . | . | . | E | K | Q | Q | M | M | E | H | E | V | R | T | E | G | G | F | R | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | P | T | P | N | Q | L | Q | E | G | M | S | I | S | V | E | E | C | T | N | R | L | R | M | F | I | Q | K | G | F | L | F | I | E | E | C | E | D | Q | N | G | I | K
Template Known Secondary structure |  | S |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  | T | T | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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