17/01/2012 05:14:08 : INFO  : Run start: Tue Jan 17 05:14:06 GMT 2012
17/01/2012 05:14:20 : INFO  : Initialised job
17/01/2012 05:14:23 : INFO  : Renaming log file 'phyre2_20120117_051405.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/a72618a874ccc3c5/phyre_20120117_051405.log'
17/01/2012 05:14:25 : INFO  : Initialised job:
Sequence
>batch____
MKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGV
PEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDF
GYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVY
EIK

17/01/2012 05:14:28 : INFO  : Checked sequence
17/01/2012 05:14:34 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 05:14:36 : INFO  : PSI-BLAST 3 iterations
17/01/2012 05:15:51 : INFO  : PSI-BLAST 5 iterations
17/01/2012 05:17:01 : INFO  : Finished PSI-BLAST
17/01/2012 05:17:06 : INFO  : Running Buildali to generate a3m file
17/01/2012 05:24:36 : INFO  : Converting to HMM
17/01/2012 05:24:40 : INFO  : Calibrating HMM
17/01/2012 05:25:01 : INFO  : Searching HMM database
17/01/2012 05:28:21 : INFO  : Finished buildali
17/01/2012 05:28:23 : INFO  : Predicting secondary structure
17/01/2012 05:28:38 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 05:28:41 : INFO  : Predicting Disordered regions
17/01/2012 05:28:49 : INFO  : Predicted Disorder (Disopred)
17/01/2012 05:28:52 : INFO  : Running memsat_svm check
17/01/2012 05:34:17 : INFO  : Running memsat_svm full
17/01/2012 05:40:09 : INFO  : Predicted Transmembrane (memsat_svm) ID 'a72618a874ccc3c5'
17/01/2012 05:40:12 : INFO  : Initialising fold library search
17/01/2012 05:40:17 : INFO  : Initialised search input
17/01/2012 05:40:21 : INFO  : Building Ensemble models
17/01/2012 05:40:27 : INFO  : Building hh.d1fuxa_.model.1.pdb
17/01/2012 05:40:54 : INFO  : Building d1fuxa_.1.pdb
17/01/2012 05:41:19 : INFO  : Building d1fjja_.2.pdb
17/01/2012 05:41:45 : INFO  : Building c3n08A_.3.pdb
17/01/2012 05:42:08 : INFO  : Building c2evvD_.4.pdb
17/01/2012 05:42:32 : INFO  : Building c2r77A_.5.pdb
17/01/2012 05:43:00 : INFO  : Building d1wpxb1.6.pdb
17/01/2012 05:43:26 : INFO  : Building c2gzqA_.7.pdb
17/01/2012 05:43:50 : INFO  : Building c2jyzA_.8.pdb
17/01/2012 05:44:16 : INFO  : Building c1wkpA_.9.pdb
17/01/2012 05:44:42 : INFO  : Building d1kn3a_.10.pdb
17/01/2012 05:45:10 : INFO  : Building d2qyqa1.11.pdb
17/01/2012 05:45:36 : INFO  : Building d1a44a_.12.pdb
17/01/2012 05:46:04 : INFO  : Building d1qoua_.13.pdb
17/01/2012 05:46:31 : INFO  : Building c3ks7D_.14.pdb
17/01/2012 05:46:58 : INFO  : Building d1qcsa1.15.pdb
17/01/2012 05:47:26 : INFO  : Building c1ljzB_.16.pdb
17/01/2012 05:47:55 : INFO  : Building c3pnrB_.17.pdb
17/01/2012 05:48:22 : INFO  : Building c3kmlB_.18.pdb
17/01/2012 05:48:51 : INFO  : Building d1vcla3.19.pdb
17/01/2012 05:49:17 : INFO  : Building d1hdgo1.20.pdb
17/01/2012 05:50:19 : INFO  : Finished HH model building
17/01/2012 05:50:22 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 05:51:29 : INFO  : html domain output complete ID 'a72618a874ccc3c5'
17/01/2012 06:15:56 : INFO  : Run end  : Tue Jan 17 06:15:54 GMT 2012
