Phyre 2 alignment of P77368 with c3s6oD_

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Job Description | P77368
Confidence | 2.03% | Date | Thu Jan 5 12:28:15 GMT 2012
Rank | 50 | Aligned Residues | 29
% Identity | 10% | Template | c3s6oD_
PDB info | PDB header:hydrolase | Chain: D: PDB Molecule:polysaccharide deacetylase family protein; | PDBTitle: crystal structure of a polysaccharide deacetylase family protein from2 burkholderia pseudomallei
Resolution | 1.85 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | S | P | S | L | T | W | S | G | V | P | E | G | T | K | S | F | A | V | T | V | Y | D | P | D | A | P | T | G | S | G | W
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | H | P | V | Q | A | N | W | . | . | . | P | G | R | A | R | V | A | V | Q | F | V | L | N | Y | E | E | G | G | E | N | C | V
Template Known Secondary structure |  | S |  |  |  |  |  |  | . | . | . | G | G | G |  | S |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 17 | . | . | 20 | . | . | . |  |  |  | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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