95 c3sm9A_ Probab=96.94   E-value=0.025  Score=32.24  Aligned_columns=221  Identities=14%

Q ss_pred             CEEEEECC-----------CCCHHHHHHHHHHHHHHHHCC----------CEEEEEECCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf             48999888-----------899789999999999999879----------889999889997899998777764187631
Q batch____        28 TIALVVST-----------LNNPFFVSLKDGAQKEADKLG----------YNLVVLDSQNNPAKELANVQDLTVRGTKIL   86 (296)
Q Consensus        28 ~Igii~~~-----------~~~~~~~~~~~gi~~~a~~~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (296)
                      +||.++|-           ...+...++..+++-+.++-+          ..+.+.++..++.........+...+...+
T Consensus        11 ~Ig~l~pl~~~~~~~~~~~~~~~~g~~~~~A~~~Ai~~iN~~~~iL~~~~l~~~~~Dt~~~~~~a~~~~~~li~~~~~~v   90 (437)
T c3sm9A_          11 VLGGLFPINEKGTTEECGRINEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCSRDTYALEQSLEFVRASLLIA   90 (437)
T ss_dssp             EEEEEECCEEECCCCSEEEECTTTTHHHHHHHHHHHHHHHHCSSSSTTCCEEEEEEECTTCHHHHHHHHHHHHHTCCCEE
T ss_pred             EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEE
T ss_conf             99999840368886654444430016789999999999860888688708999998589997899999999984499449


Q ss_pred             -CCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCC------EEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
Q ss_conf             -10246654450789988753984011467765457752------44007078754566788853776750799865887
Q batch____        87 -LINPTDSDAVGNAVKMANQANIPVITLDRQATKGEVVS------HIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAG  159 (296)
Q Consensus        87 -i~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~~~~~------~v~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  159 (296)
                       ++.+............+...++|.+......+......      ....+....+......+...+-+++.++.    .+
T Consensus        91 aiiGp~~S~~~~a~~~~~~~~~ip~is~~~~~~~ls~~~~~~~f~r~~p~~~~~~~a~~~~~~~~~w~~v~vv~----~~  166 (437)
T c3sm9A_          91 GVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTYVSTVA----SE  166 (437)
T ss_dssp             EEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTTTTEEESSCCTHHHHHHHHHHHHHTTCCEEEEEE----ES
T ss_pred             EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEE----EC
T ss_conf             99828987889999999986089621342463332377771389985200135689999999963998899983----14


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             54565899999998652066551554168751679999999884078996783065346768999999858999659999
Q batch____       160 TSAARERGEGFQQAVAAHKFNVLASQPADFDRIKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGF  239 (296)
Q Consensus       160 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~d~~a~~~~~~l~~~g~~~~~~i~~  239 (296)
                      ..........+.+.+.+.+..+...................+.........+++.+...+..+++++++.|.. ...++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~iii~~~~~~~~~~l~~~a~~~g~~-~~~i~~  245 (437)
T c3sm9A_         167 GDYGETGIEAFEQEARLRNISIATAEKVGRIRKSYDSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANAS-FTWVAS  245 (437)
T ss_dssp             SHHHHHHHHHHHHHHHTTTCEEEEEEEECCCHHHHHHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCC-CEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCC-EEEEEE
T ss_conf             2257889999999987508468999970887655799999874137773699972888999999999864997-489980


Q ss_pred             ECCHHHHHHHHCCC
Q ss_conf             57957999985599
Q batch____       240 DGTPDGEKAVNDGK  253 (296)
Q Consensus       240 ~~~~~~~~~~~~~p  253 (296)
                      +++..........+
T Consensus       246 ~~~~~~~~~~~~~~  259 (437)
T c3sm9A_         246 DGWGAQESIIKGSE  259 (437)
T ss_dssp             TTTTTCHHHHTTCT
T ss_pred             CCCCCCHHHHHHHH
T ss_conf             34456478874225