120 c1upaC_ Probab=66.39   E-value=4.1  Score=19.32  Aligned_columns=135  Identities=20%

Q ss_pred             CCCCCHHCCCCEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             00867001581214789958984799999999999985318383899970897408899999999981699606775543
Q batch____       103 LEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSNMC  182 (759)
Q Consensus       103 l~~~~RL~~PL~R~rG~~~f~~ISWdEAl~~iA~klk~i~~~~~~~~~~sg~~~~e~~~l~~~f~~~~Gt~n~~~~~~~C  182 (759)
                      ++.+-..+.|.....-.....+-.++++++.++++|+.-+.|  +++.+.|-....+.-.+..|+..+|.+-+  ++.++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~rp--vii~G~g~~~~~~~~~l~~lae~~~~pv~--~t~~~  237 (547)
T c1upaC_         162 LGSSEGIDPPANTPAKPVGVVADGWQKAADQAAALLAEAKHP--VLVVGAAAIRSGAVPAIRALAERLNIPVI--TTYIA  237 (547)
T ss_dssp             HTCCTTCCCCCCCCSSCBCCCCTTHHHHHHHHHHHHHHCSSE--EEEECHHHHHTTCHHHHHHHHHHHTCCEE--ECSTT
T ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHHHHHHCCCEE--EECCC
T ss_conf             057466654444565556777889989999999998717981--99988874788799999999998199299--60122


Q ss_pred             HHHHHHHHHHHHCCCCC--------CCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf             02688899988088999--------8886599619889997698878207999999999986986999769
Q batch____       183 HEPTSVGLAASIGVGKG--------TVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKMIAINP  245 (759)
Q Consensus       183 ~~~~~~a~~~~~G~~~~--------~~~~~D~~~ad~ii~~G~Np~~~~p~~~~~l~~a~~rGakiVvIDP  245 (759)
                      ...-.......+|.-..        .....-++++|+||.+|+...+........    .....++|.||+
T Consensus       238 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~D~il~iG~~~~~~~~~~~~~----~~~~~~~i~v~~  304 (547)
T c1upaC_         238 KGVLPVGHELNYGAVTGYXDGILNFPALQTXFAPVDLVLTVGYDYAEDLRPSXWQ----KGIEKKTVRISP  304 (547)
T ss_dssp             TTSSCTTCTTEEEECCTTHHHHHTSCHHHHHHTTCCEEEEETCCGGGSCCHHHHC----CSSCCEEEEEES
T ss_pred             CCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCC----CCCCCCEEEECC
T ss_conf             8655786733325110355433452234542124884999868457222454445----578861899829