19/01/2012 06:39:43 : INFO  : Run start: Thu Jan 19 06:39:41 GMT 2012
19/01/2012 06:39:52 : INFO  : Initialised job
19/01/2012 06:39:55 : INFO  : Renaming log file 'phyre2_20120119_063940.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/phyre_20120119_063940.log'
19/01/2012 06:39:58 : INFO  : Initialised job:
Sequence
>batch____
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHS
ASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSD
CYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSN
MCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDA
ASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAER
TIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKP
SAEFLARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKNGAQAVTVEDSMSMIHASRGV
LKPAGVMLKSECAVVAGIAQAALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRH
PGGFHLINAAAERRWMTPSGKANFITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGM
DDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN

19/01/2012 06:40:00 : INFO  : Checked sequence
19/01/2012 06:40:06 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 06:40:08 : INFO  : PSI-BLAST 3 iterations
19/01/2012 06:43:34 : INFO  : PSI-BLAST 5 iterations
19/01/2012 06:47:31 : INFO  : Finished PSI-BLAST
19/01/2012 06:47:36 : INFO  : Running Buildali to generate a3m file
19/01/2012 07:07:35 : INFO  : Converting to HMM
19/01/2012 07:07:56 : INFO  : Calibrating HMM
19/01/2012 07:08:27 : INFO  : Searching HMM database
19/01/2012 07:22:02 : INFO  : Finished buildali
19/01/2012 07:22:06 : INFO  : Predicting secondary structure
19/01/2012 07:22:23 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 07:22:26 : INFO  : Predicting Disordered regions
19/01/2012 07:22:37 : INFO  : Predicted Disorder (Disopred)
19/01/2012 07:22:41 : INFO  : Running memsat_svm check
19/01/2012 07:31:02 : INFO  : Globular protein
19/01/2012 07:31:04 : INFO  : Predicted Transmembrane (memsat_svm) ID 'a7095d54128e7d0f'
19/01/2012 07:31:08 : INFO  : Initialising fold library search
19/01/2012 07:31:15 : INFO  : Initialised search input
19/01/2012 07:31:19 : INFO  : Building Ensemble models
19/01/2012 07:31:27 : INFO  : Building hh.c1h0hA_.model.1.pdb
19/01/2012 07:31:59 : INFO  : Building hh.c1kqgA_.model.2.pdb
19/01/2012 07:32:24 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/hh.c1kqgA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/c1kqgA_.2.pdb
19/01/2012 07:32:32 : INFO  : Building hh.c2v45A_.model.3.pdb
19/01/2012 07:32:58 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/hh.c2v45A_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/c2v45A_.3.pdb
19/01/2012 07:33:07 : INFO  : Building hh.c2e7zA_.model.4.pdb
19/01/2012 07:33:34 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/hh.c2e7zA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/c2e7zA_.4.pdb
19/01/2012 07:33:43 : INFO  : Building hh.c2nyaF_.model.5.pdb
19/01/2012 07:34:09 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/hh.c2nyaF_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/c2nyaF_.5.pdb
19/01/2012 07:34:17 : INFO  : Building hh.c1ogyA_.model.6.pdb
19/01/2012 07:34:45 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/hh.c1ogyA_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a7095d54128e7d0f/c1ogyA_.6.pdb
19/01/2012 07:34:54 : INFO  : Building c1h0hA_.1.pdb
19/01/2012 07:35:25 : INFO  : Building c1kqgA_.2.pdb
19/01/2012 07:35:58 : INFO  : Building c2v45A_.3.pdb
19/01/2012 07:36:29 : INFO  : Building c2e7zA_.4.pdb
19/01/2012 07:36:59 : INFO  : Building c2nyaF_.5.pdb
19/01/2012 07:37:31 : INFO  : Building c1ogyA_.6.pdb
19/01/2012 07:38:05 : INFO  : Building c2iv2X_.7.pdb
19/01/2012 07:38:36 : INFO  : Building c1h5nC_.8.pdb
19/01/2012 07:39:10 : INFO  : Building c1tmoA_.9.pdb
19/01/2012 07:39:41 : INFO  : Building c2vpyE_.10.pdb
19/01/2012 07:40:12 : INFO  : Building c2ivfA_.11.pdb
19/01/2012 07:40:44 : INFO  : Building c1eu1A_.12.pdb
19/01/2012 07:41:16 : INFO  : Building c1y5iA_.13.pdb
19/01/2012 07:41:49 : INFO  : Building c1vlfQ_.14.pdb
19/01/2012 07:42:21 : INFO  : Building c1g8jC_.15.pdb
19/01/2012 07:42:51 : INFO  : Building d1kqfa2.16.pdb
19/01/2012 07:43:23 : INFO  : Building d2jioa2.17.pdb
19/01/2012 07:43:54 : INFO  : Building d1h0ha2.18.pdb
19/01/2012 07:44:27 : INFO  : Building d2iv2x2.19.pdb
19/01/2012 07:44:59 : INFO  : Building d1ogya2.20.pdb
19/01/2012 07:49:26 : INFO  : Finished HH model building
19/01/2012 07:49:30 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 07:51:24 : INFO  : html domain output complete ID 'a7095d54128e7d0f'
19/01/2012 19:13:15 : INFO  : Run end  : Thu Jan 19 19:13:13 GMT 2012
