250 c2il1A_ Probab=99.40   E-value=2.9e-12  Score=91.00  Aligned_columns=157  Identities=22%

Q ss_pred             CCCCCEEEEEHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf             44454012100002333056799884753235676555511357899987997999964522132342102489999999
Q batch____       198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIK  277 (490)
Q Consensus       198 ~~~~~ikvaiiG~~n~GKSsLin~l~~~~~~ivs~~~gtT~d~~~~~~~~~~~~~~l~Dt~G~~~~~~~~~~~~~~~~~r  277 (490)
                      |.+..++|+++|.+++|||||+++++.       +..+.+..................++.+............      
T Consensus         1 p~d~~~KivivG~~~vGKTSli~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------   67 (163)
T c2il1A_           1 PADFKLQVIIIGSRGVGKTSLMERFTD-------STVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYY------   67 (163)
T ss_dssp             CCSEEEEEEEECSTTSSHHHHHHHHCC-------CCTTEEEEEEEEEETTEEEEEEEEEECCSGGGHHHHHHHH------
T ss_pred             CCCCEEEEEEECCCCCCHHHHHHHHHC-------CCCCCEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHH------
T ss_conf             977379999997989899999999973-------9325402357998500467753013320110001111100------


Q ss_pred             HHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHC----CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf             99851008889999718888888899999999973----99899999963078988989999999987100699838999
Q batch____       278 TLQAIEDANVVMLVIDAREGISDQDLSLLGFILNS----GRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFI  353 (490)
Q Consensus       278 ~~~~i~~adv~ilViDa~~~~~~~d~~i~~~i~~~----~kp~iiv~NK~Dl~~~~~~~~~~~~i~~~l~~~~~~pvi~i  353 (490)
                           ...+......+...................    ..+.+++.||.|+....  ....+............+++++
T Consensus        68 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~  140 (163)
T c2il1A_          68 -----RSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDR--EITRQQGEKFAQQITGMRFCEA  140 (163)
T ss_dssp             -----HHCSEEEEEEETTCHHHHHTHHHHHHHHHHHSCTTCEEEEEEECGGGGGGC--CSCHHHHHHHHHTSTTCEEEEC
T ss_pred             -----HHHCCCCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCEEEEECCCCCCHHHH--CCCHHHHHHHHHHCCCCEEEEE
T ss_conf             -----100000111322222210000011000000023332033201333101220--1324789999974089169995


Q ss_pred             ECCCCCCHHHHHHHHHHHHHH
Q ss_conf             788989999999999999987
Q batch____       354 SALHGSGVGNLFESVREAYDS  374 (490)
Q Consensus       354 SA~~g~gi~~l~~~i~~~~~~  374 (490)
                      ||++|.||+++|+.+.+..-+
T Consensus       141 Saktg~~V~e~f~~l~~~i~~  161 (163)
T c2il1A_         141 SAKDNFNVDEIFLKLVDDILK  161 (163)
T ss_dssp             BTTTTBSHHHHHHHHHHHHHH
T ss_pred             ECCCCCCHHHHHHHHHHHHHH
T ss_conf             268999989999999999997