279 c1vmaA_ Probab=98.75   E-value=1.9e-07  Score=62.59  Aligned_columns=147  Identities=22%

Q ss_pred             EEEEECCCCCCHHHHHHHHH------CCCCEEECCCC----------------CEEEEEEEEEEE-------------EC
Q ss_conf             89997599789889999983------88721214788----------------602525799999-------------89
Q batch____         4 VVALVGRPNVGKSTLFNRLT------RTRDALVADFP----------------GLTRDRKYGRAE-------------IE   48 (490)
Q Consensus         4 ~I~ivG~~nvGKStL~N~l~------~~~~a~v~~~~----------------g~Trd~~~~~~~-------------~~   48 (490)
                      +|+++|.++|||||..-.|.      |.++++++--.                |+........-.             ..
T Consensus        94 vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  173 (294)
T c1vmaA_          94 VIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHALAR  173 (294)
T ss_dssp             EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHHHHT
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             99998068876024899999999967994899975876864799999999761982897488369899999999999977


Q ss_pred             CEEEEEEECCCCCCCCHHHHHHHHHHHHHHH----HHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf             9899999768856675368899999999988----667989999758987898899999999972698479999855888
Q batch____        49 GREFICIDTGGIDGTEDGVETRMAEQSLLAI----EEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDGLD  124 (490)
Q Consensus        49 ~~~~~lvDTpG~~~~~~~~~~~~~~~~~~~~----~~ad~il~vvD~~~~~~~~d~~~~~~L~~~~~~~ilv~NKiD~~~  124 (490)
                      ++.+.|+||||.........+++.......-    ...|.+++|+|+..+  ..+.+-+....+.-..--++++|.|...
T Consensus       174 ~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~--~~~~~~~~~~~~~~~~~~iIlTKlDe~~  251 (294)
T c1vmaA_         174 NKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTG--QNGLVQAKIFKEAVNVTGIILTKLDGTA  251 (294)
T ss_dssp             TCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGH--HHHHHHHHHHHHHSCCCEEEEECGGGCS
T ss_pred             CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC--HHHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf             99899981888987857999999999999630356688539998114687--8999999999630899769997444788


Q ss_pred             HHHHHHHHHHCCCCCEEEEEECCCCCHHHH
Q ss_conf             235578887237995799985132110367
Q batch____       125 PDQAVVDFYSLGLGEIYPIAASHGRGVLSL  154 (490)
Q Consensus       125 ~~~~~~e~~~lg~~~~~~iSa~~g~g~~~L  154 (490)
                      .--.+..+.....-++.+++  +|+++++|
T Consensus       252 ~~G~~l~~~~~~~~Pi~~i~--~Gq~v~Dl  279 (294)
T c1vmaA_         252 KGGITLAIARELGIPIKFIG--VGEKAEDL  279 (294)
T ss_dssp             CTTHHHHHHHHHCCCEEEEE--CSSSGGGE
T ss_pred             CHHHHHHHHHHHCCCEEEEE--CCCCCCCC
T ss_conf             55799999998579889996--59984554