178 d2frna1 Probab=99.26   E-value=2.6e-11  Score=87.52  Aligned_columns=162  Identities=16%

Q ss_pred             HCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCC
Q ss_conf             21424899999999678887888999889998999999973199838986214421111111010000001112222222
Q batch____        44 SFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQAN  123 (251)
Q Consensus        44 s~~~~~~~~~~~~~~l~~~~~~~VLDiGCGtG~~~~~l~~~~~~~~~v~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (251)
                      ........+..+++.  ..+|++|||+|||+|.++..++...  +..|+++|+++.+++.++.+...++..........+
T Consensus        78 f~~~~~~e~~~~~~~--~~~g~~vlD~~~G~G~~~i~~a~~~--~~~V~~vDi~~~ai~~a~~n~~~n~~~~~~~~~~~d  153 (248)
T d2frna1          78 FSPANVKERVRXAKV--AKPDELVVDXFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRXSAYNXD  153 (248)
T ss_dssp             CCGGGHHHHHHHHHH--CCTTCEEEETTCTTTTTHHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC
T ss_pred             CCCCCHHHHHHHHHH--CCCCCEEEECCCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEECC
T ss_conf             167657889989984--4899899982688007899998517--948999976989999999999871836883999711


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             22222222102588889988620000022322210224898899996688884357789999987676776664226632
Q batch____       124 AEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDAD  203 (251)
Q Consensus       124 ~~~~~~~~~~~d~i~~~~~l~~~~~~~~~l~~~~r~LkpgG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (251)
                      ..... ....||.+++.    .......++.++.++|||||.+.+.+..........                       
T Consensus       154 ~~~~~-~~~~fD~Vi~~----~p~~~~~~~~~a~~~lkpgG~i~v~~~~~~~~~~e~-----------------------  205 (248)
T d2frna1         154 NRDFP-GENIADRILXG----YVVRTHEFIPKALSIAKDGAIIHYHNTVPEKLXPRE-----------------------  205 (248)
T ss_dssp             TTTCC-CCSCEEEEEEC----CCSSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTT-----------------------
T ss_pred             CCCCC-CCCCCCEEEEC----CCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCC-----------------------
T ss_conf             00244-20784679727----755520017889997289978999851670014321-----------------------


Q ss_pred             CCCCCHHHHHHCCCHHHHHHHHHHCCCCE-----EEEEEECCCEEEEEEEEE
Q ss_conf             10000134441799999999999749932-----699994188599999995
Q batch____       204 SYRYLAESIRMHPDQDTLKAMMQDAGFES-----VDYYNLTAGVVALHRGYK  250 (251)
Q Consensus       204 ~~~~~~~~~~~~~~~~el~~~l~~aGF~~-----v~~~~~~~G~~~i~~~~k  250 (251)
                                   ..+.++.+.++.|++.     -.+++++..+..+..=.|
T Consensus       206 -------------~~e~i~~~~~~~G~~~~v~~~~~Vk~~aP~~~h~v~d~~  244 (248)
T d2frna1         206 -------------PFETFKRITKEYGYDVEKLNELKIKRYAPGVWHVVLDLR  244 (248)
T ss_dssp             -------------THHHHHHHHHHTTCEEEEEEEEEEEEETTTEEEEEEEEE
T ss_pred             -------------HHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEEE
T ss_conf             -------------699999999966994599989981234867579999999