BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (650 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citroba... 721 0.0 UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gam... 682 0.0 UniRef50_C4L998 General secretion pathway protein D n=2 Tax=Bact... 649 0.0 UniRef50_P31701 General secretion pathway protein D n=27 Tax=Ent... 628 e-178 UniRef50_A1JPH4 General secretion pathway protein D n=28 Tax=Yer... 544 e-153 UniRef50_A8GJQ5 General secretion pathway protein D n=6 Tax=Ente... 540 e-152 UniRef50_C4UIB8 General secretion pathway protein D n=4 Tax=Yers... 532 e-149 UniRef50_A8A4B9 General secretion pathway protein D n=30 Tax=Esc... 530 e-149 UniRef50_P45779 General secretion pathway protein D n=102 Tax=Pr... 523 e-146 UniRef50_Q8VPC8 Hypothetical type II secretion protein n=6 Tax=E... 503 e-141 UniRef50_C6EGE1 General secretory pathway component, cryptic n=2... 414 e-114 UniRef50_C6CIN5 General secretion pathway protein D n=1 Tax=Dick... 405 e-111 UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified... 399 e-109 UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desu... 381 e-104 UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamm... 381 e-104 UniRef50_P31700 General secretion pathway protein D n=5 Tax=Ente... 370 e-101 UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cell... 366 1e-99 UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pse... 358 4e-97 UniRef50_Q0VSG7 General (Type II) secretion pathway protein D n=... 358 5e-97 UniRef50_C6C305 General secretion pathway protein D n=1 Tax=Dick... 357 8e-97 UniRef50_C7R8G0 General secretion pathway protein D n=1 Tax=Kang... 354 6e-96 UniRef50_Q0A5Z6 General secretion pathway protein D n=2 Tax=Ecto... 352 4e-95 UniRef50_A1WZM1 General secretion pathway protein D n=1 Tax=Halo... 341 7e-92 UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gamm... 334 6e-90 UniRef50_D0KWK8 General secretion pathway protein D n=1 Tax=Halo... 332 3e-89 UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax... 330 1e-88 UniRef50_Q1N1M8 Type II secretory pathway, component PulD n=1 Ta... 330 1e-88 UniRef50_A4BES0 Type II secretory pathway, component PulD n=1 Ta... 324 6e-87 UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax... 323 1e-86 UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 T... 322 4e-86 UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Arom... 309 2e-82 UniRef50_A0YBF4 Type II and III secretion system protein n=1 Tax... 308 4e-82 UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acineto... 307 9e-82 UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Side... 301 4e-80 UniRef50_B1JDL3 General secretion pathway protein D n=6 Tax=Pseu... 293 1e-77 UniRef50_A1U289 General secretion pathway protein D n=4 Tax=Gamm... 293 2e-77 UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyph... 292 2e-77 UniRef50_Q5ZVW8 Type II protein secretion LspD n=7 Tax=Legionell... 290 2e-76 UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Mari... 289 3e-76 UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Pro... 289 3e-76 UniRef50_C7HZF2 General secretion pathway protein D n=1 Tax=Thio... 288 4e-76 UniRef50_A7BV51 Bacterial type II and III secretion system prote... 283 1e-74 UniRef50_Q1JVV5 Type II and III secretion system protein n=1 Tax... 283 2e-74 UniRef50_Q7NRG7 Probable type II secretion system protein n=1 Ta... 282 2e-74 UniRef50_C6XJ47 General secretion pathway protein D n=1 Tax=Hirs... 278 6e-73 UniRef50_Q1YQU4 Putative general secretion pathway protein n=1 T... 276 2e-72 UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax... 275 5e-72 UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gamm... 274 8e-72 UniRef50_C4K9Q5 General secretion pathway protein D n=1 Tax=Thau... 271 5e-71 UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burk... 269 2e-70 UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desu... 268 5e-70 UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desu... 267 8e-70 UniRef50_Q221L0 Type II and III secretion system protein n=1 Tax... 265 4e-69 UniRef50_B8GXR3 Type II secretion pathway protein D n=3 Tax=Caul... 265 5e-69 UniRef50_B3E7M1 General secretion pathway protein D n=8 Tax=Geob... 263 2e-68 UniRef50_A8ZWZ5 General secretion pathway protein D n=2 Tax=Desu... 259 2e-67 UniRef50_B7RHZ1 General secretion pathway protein D n=1 Tax=Rose... 258 4e-67 UniRef50_C8PXJ4 General secretion pathway protein D n=1 Tax=Enhy... 257 1e-66 UniRef50_D0XKD9 General secretion pathway protein D n=1 Tax=Brev... 257 1e-66 UniRef50_A3VSK1 General secretion pathway protein D n=1 Tax=Parv... 255 5e-66 UniRef50_Q48JN3 General secretion pathway protein GspD n=2 Tax=P... 254 7e-66 UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphi... 249 3e-64 UniRef50_Q4UYQ6 Type II secretion system protein D n=6 Tax=Prote... 249 3e-64 UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyph... 248 5e-64 UniRef50_Q1D9E0 General secretion pathway protein D n=2 Tax=Cyst... 245 4e-63 UniRef50_A3W186 General secretion pathway protein D n=1 Tax=Rose... 243 2e-62 UniRef50_Q2G4Y4 Type II and III secretion system protein n=3 Tax... 241 5e-62 UniRef50_C5CPK3 General secretion pathway protein D n=1 Tax=Vari... 240 1e-61 UniRef50_Q6MMM9 General secretion pathway protein D n=1 Tax=Bdel... 226 2e-57 UniRef50_A3SDT6 General secretion pathway protein D n=1 Tax=Sulf... 225 4e-57 UniRef50_B4UDG8 General secretion pathway protein D n=4 Tax=Anae... 221 6e-56 UniRef50_A9GDS2 General secretion pahtway protein D n=1 Tax=Sora... 218 4e-55 UniRef50_C1SHL2 General secretion pathway protein D n=1 Tax=Deni... 214 6e-54 UniRef50_C1TK46 General secretion pathway protein D n=1 Tax=Deth... 211 8e-53 UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n... 209 2e-52 UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax... 209 2e-52 UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Synt... 209 3e-52 UniRef50_B3R7X2 General Secretory Pathway protein D, type II sec... 209 4e-52 UniRef50_D0LLW3 General secretion pathway protein D n=1 Tax=Hali... 201 7e-50 UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Coma... 199 2e-49 UniRef50_A6Q682 Type II secretion system protein D n=1 Tax=Sulfu... 196 3e-48 UniRef50_Q2Y7S4 Type II and III secretion system protein n=1 Tax... 194 6e-48 UniRef50_A6DDM8 Type II and III secretion system protein:NolW-li... 192 4e-47 UniRef50_O67320 General secretion pathway protein D n=1 Tax=Aqui... 191 1e-46 UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Bur... 187 1e-45 UniRef50_C5S7Y5 General secretion pathway protein D n=1 Tax=Allo... 185 4e-45 UniRef50_C6BTY5 General secretion pathway protein D n=1 Tax=Desu... 185 4e-45 UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Synt... 184 1e-44 UniRef50_Q04SX5 Type II secretory pathway component, protein D n... 175 6e-42 UniRef50_C0QPL4 General secretion pathway protein D n=1 Tax=Pers... 173 1e-41 UniRef50_A8UQX4 General secretion pathway protein D n=1 Tax=Hydr... 171 6e-41 UniRef50_C0QK68 GspD2 n=1 Tax=Desulfobacterium autotrophicum HRM... 171 1e-40 UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhiz... 167 1e-39 UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobiu... 166 2e-39 UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D prot... 166 2e-39 UniRef50_C5SIE2 Type II and III secretion system protein n=1 Tax... 166 3e-39 UniRef50_A6FZI7 Type II and III secretion system protein n=1 Tax... 164 8e-39 UniRef50_B0UFJ1 General secretion pathway protein D n=4 Tax=Meth... 162 3e-38 UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Coma... 161 8e-38 UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Mari... 160 1e-37 UniRef50_B9L741 Putative GspD n=1 Tax=Nautilia profundicola AmH ... 158 7e-37 UniRef50_Q3JD22 General secretion pathway protein D n=2 Tax=Nitr... 157 2e-36 UniRef50_C1A7C5 Putative general secretion pathway protein D n=1... 156 2e-36 UniRef50_B4U6K2 General secretion pathway protein D n=1 Tax=Hydr... 156 3e-36 UniRef50_B7S1V0 General secretion pathway protein D n=1 Tax=mari... 155 4e-36 UniRef50_B6QWW0 General (Type II) secretion pathway (GSP) D prot... 155 4e-36 UniRef50_Q0BZ85 Type II secretion system protein n=1 Tax=Hyphomo... 155 4e-36 UniRef50_A6DJN7 Secretion protein XqhA n=1 Tax=Lentisphaera aran... 155 4e-36 UniRef50_Q15QU6 Type II and III secretion system protein n=1 Tax... 154 7e-36 UniRef50_A4A016 General secretion pathway protein D (Precursor) ... 154 1e-35 UniRef50_A0LPH6 General secretion pathway protein D n=1 Tax=Synt... 153 2e-35 UniRef50_Q89HG9 Blr6022 protein n=3 Tax=Bradyrhizobium RepID=Q89... 153 2e-35 UniRef50_B5JLH7 Bacterial type II and III secretion system prote... 150 1e-34 UniRef50_B9XBV8 Type II and III secretion system protein n=1 Tax... 149 3e-34 UniRef50_B0T7N8 General secretion pathway protein D n=1 Tax=Caul... 149 5e-34 UniRef50_Q82WH1 General (Type II) secretion pathway (GSP) D prot... 147 1e-33 UniRef50_D0X4T6 Putative uncharacterized protein n=1 Tax=Vibrio ... 145 4e-33 UniRef50_B8ESI9 General secretion pathway protein D n=1 Tax=Meth... 145 5e-33 UniRef50_O80264 Similar to Gene IV protein :Acc# A04268 n=3 Tax=... 143 2e-32 UniRef50_P29041 General secretion pathway protein D n=22 Tax=Xan... 142 3e-32 UniRef50_A6CD16 General secretion pathway protein D (Precursor) ... 142 5e-32 UniRef50_B8KPH7 General secretion pathway protein D n=1 Tax=gamm... 142 6e-32 UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseu... 140 2e-31 UniRef50_A7K3T2 Type II secretory pathway, component PulD n=2 Ta... 139 3e-31 UniRef50_C1DRT4 General secretion pathway protein D n=2 Tax=Gamm... 139 3e-31 UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 139 4e-31 UniRef50_B9XM19 Type II and III secretion system protein n=1 Tax... 139 5e-31 UniRef50_A4A5L7 General secretion (Type II) pathway protein D n=... 138 6e-31 UniRef50_A4SKW4 S-protein secretion component D n=2 Tax=Gammapro... 138 8e-31 UniRef50_B8IR79 General secretion pathway protein D n=2 Tax=Meth... 137 1e-30 UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella ko... 136 2e-30 UniRef50_C6HW33 Putative general secretion pathway protein D n=1... 136 3e-30 UniRef50_D2L502 Type II and III secretion system protein n=1 Tax... 135 4e-30 UniRef50_B2KC06 Type II and III secretion system protein n=1 Tax... 135 6e-30 UniRef50_D2QZD1 Type II and III secretion system protein n=1 Tax... 134 8e-30 UniRef50_A1WFQ3 General secretion pathway protein D n=1 Tax=Verm... 134 8e-30 UniRef50_C6BWY6 Type II and III secretion system protein n=1 Tax... 134 1e-29 UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteo... 134 1e-29 UniRef50_Q1YMS0 Putative general secretion pathway (GSP) protein... 133 2e-29 UniRef50_C0GQP0 General secretion pathway protein D n=1 Tax=Desu... 133 2e-29 UniRef50_Q212Y1 Type II and III secretion system protein n=5 Tax... 132 3e-29 UniRef50_B1ZUM2 Type II and III secretion system protein n=1 Tax... 132 5e-29 UniRef50_Q1Z9G5 General secretion pathway protein D n=2 Tax=Phot... 131 8e-29 UniRef50_A7IH57 General secretion pathway protein D n=1 Tax=Xant... 131 8e-29 UniRef50_A4C8H8 General (Type II) secretion pathway (GSP) D prot... 131 8e-29 UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax... 131 8e-29 UniRef50_A3ERG1 Putative general secretion pathway protein D n=2... 131 1e-28 UniRef50_C5B3Y6 Putative General secretion protein D n=1 Tax=Met... 130 1e-28 UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Bu... 130 1e-28 UniRef50_O80300 Virion export protein n=9 Tax=Inovirus RepID=G4P... 130 2e-28 UniRef50_Q0BR89 General secretion pathway protein D n=1 Tax=Gran... 130 2e-28 UniRef50_D0HB85 S-protein secretion component D n=1 Tax=Vibrio m... 129 3e-28 UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax... 129 4e-28 UniRef50_C6Q9T0 General secretion pathway protein D n=1 Tax=Hyph... 129 4e-28 UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella ... 129 5e-28 UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisser... 128 6e-28 UniRef50_A3UH04 General (Type II) secretion pathway (GSP) D prot... 128 7e-28 UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-li... 127 1e-27 UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobaci... 127 2e-27 UniRef50_B0BAC9 Type III secretion structural protein (Outer mem... 127 2e-27 UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Meth... 126 2e-27 UniRef50_D0SET7 Type IV pilus biogenesis and competence protein ... 126 2e-27 UniRef50_A0P0N8 General secretion proteinD n=1 Tax=Labrenzia agg... 126 3e-27 UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteob... 125 7e-27 UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas... 125 7e-27 UniRef50_D1R7U2 Putative type III secretion protein SctC n=2 Tax... 124 9e-27 UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gamm... 124 1e-26 UniRef50_A3UDE6 General secretion proteinD n=1 Tax=Oceanicaulis ... 124 1e-26 UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas in... 123 2e-26 UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular or... 123 3e-26 UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vi... 122 4e-26 UniRef50_B8D2D9 Type II and III secretion system protein n=1 Tax... 121 9e-26 UniRef50_A8EVV0 General secretion pathway protein D n=1 Tax=Arco... 121 1e-25 UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 121 1e-25 UniRef50_D0D8V3 General secretion pathway protein D n=1 Tax=Citr... 120 2e-25 UniRef50_D1N173 Type II and III secretion system protein n=1 Tax... 120 2e-25 UniRef50_Q7UX59 General secretion pathway protein D [Precursor] ... 120 2e-25 UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Pr... 119 3e-25 UniRef50_B8E238 Type II and III secretion system protein n=1 Tax... 119 3e-25 UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadace... 119 3e-25 UniRef50_C1ZGU1 Type II secretory pathway, component PulD n=1 Ta... 119 3e-25 UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderi... 119 3e-25 UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter p... 119 3e-25 UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammapro... 119 5e-25 UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS 118 6e-25 UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=A... 117 1e-24 UniRef50_B1XUD4 Type II and III secretion system protein n=1 Tax... 117 2e-24 UniRef50_A1ASI5 Type II and III secretion system protein n=1 Tax... 117 2e-24 UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative ... 116 3e-24 UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae Re... 116 3e-24 UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromati... 116 4e-24 UniRef50_B2IBK3 General secretion pathway protein D n=2 Tax=Beij... 115 5e-24 UniRef50_B3TCB2 Putative bacterial type II and III secretion sys... 115 5e-24 UniRef50_Q6MB50 Putative component D of type II secretion pathwa... 115 6e-24 UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax... 114 8e-24 UniRef50_UPI0001745622 probable general secretion pathway protei... 114 9e-24 UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax... 114 1e-23 UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein ... 114 1e-23 UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Ta... 114 1e-23 UniRef50_A9H699 General secretion pathway protein D n=3 Tax=cell... 113 2e-23 UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae Rep... 113 2e-23 UniRef50_Q39X07 Type II and III secretion system protein:NolW-li... 113 3e-23 UniRef50_Q7UHD1 General secretion pathway protein D (OutD) n=1 T... 113 3e-23 UniRef50_B5YDZ7 Bacterial type II and III secretion system prote... 112 3e-23 UniRef50_B4D9V8 Type II and III secretion system protein n=1 Tax... 112 4e-23 UniRef50_P03667 Virion export protein n=4 Tax=root RepID=G4P_BPIKE 112 5e-23 UniRef50_A3YI86 Type IV pili biogenesis protein PilQ n=1 Tax=Mar... 112 6e-23 UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=... 112 7e-23 UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax... 111 7e-23 UniRef50_A8FXQ1 Type II secretory pathway component PulD-like pr... 111 1e-22 UniRef50_A1HPR1 Type II and III secretion system protein n=1 Tax... 111 1e-22 UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legi... 111 1e-22 UniRef50_C9RKD2 Type II and III secretion system protein n=1 Tax... 110 1e-22 UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Bur... 110 2e-22 UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax... 110 2e-22 UniRef50_Q6MPI6 Fimbrial assembly protein n=1 Tax=Bdellovibrio b... 109 3e-22 UniRef50_D2RKE8 Type II and III secretion system protein n=1 Tax... 109 3e-22 UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lo... 109 3e-22 UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragme... 109 3e-22 UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter... 109 3e-22 UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein ... 109 4e-22 UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fast... 109 4e-22 UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnic... 108 4e-22 UniRef50_Q07N78 General secretion pathway protein D n=1 Tax=Rhod... 108 6e-22 UniRef50_B6A2I8 Type II and III secretion system protein n=3 Tax... 108 6e-22 UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=ce... 107 1e-21 UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis... 107 1e-21 UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 107 1e-21 UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 T... 107 1e-21 UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD 107 2e-21 UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadac... 107 2e-21 UniRef50_Q01NT3 Type II and III secretion system protein n=1 Tax... 106 2e-21 UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxoba... 106 2e-21 UniRef50_Q21H82 Type II and III secretion system protein n=11 Ta... 106 3e-21 UniRef50_C8X4Y6 Type IV pilus secretin PilQ n=1 Tax=Desulfohalob... 106 3e-21 UniRef50_B5JQS4 Bacterial type II and III secretion system prote... 106 3e-21 UniRef50_C4ZLP2 Type II and III secretion system protein n=1 Tax... 105 4e-21 UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobac... 105 4e-21 UniRef50_A1WEI0 Type II and III secretion system protein n=1 Tax... 105 4e-21 UniRef50_B1Y075 Pilus (MSHA type) biogenesis protein MshL n=1 Ta... 105 4e-21 UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter Re... 104 9e-21 UniRef50_C1ZJR8 Type II secretory pathway, component PulD n=1 Ta... 104 1e-20 UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Ta... 104 1e-20 UniRef50_UPI0001744674 general secretion pathway protein D n=1 T... 103 1e-20 UniRef50_Q1Q8Q7 Type II and III secretion system protein n=5 Tax... 103 1e-20 UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thio... 103 2e-20 UniRef50_C3KR31 CpaC pilus assembly protein n=1 Tax=Rhizobium sp... 103 2e-20 UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiob... 103 2e-20 UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans... 103 3e-20 UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter Re... 103 3e-20 >UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AIN8_CITK8 Length = 640 Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/650 (57%), Positives = 483/650 (74%), Gaps = 30/650 (4%) Query: 9 CCLLAAL-LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 C L L L + A N + A+F N DIR+F++ VG++L KTIL+DPSVQGT+SVR+ Sbjct: 8 CVALTTLALYSSSLFAAN--FSASFKNTDIREFIDTVGRNLNKTILVDPSVQGTVSVRTY 65 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 + ++ EYYQFFLS+LDLYG SVI +DNG +KVVRS+ +T+ IADS PG GDE++T Sbjct: 66 NVLTEDEYYQFFLSVLDLYGLSVIPMDNGMVKVVRSSVARTAGTPIADSKNPGKGDEIIT 125 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 R+V +ENVP R+LAPLLRQ+ DA +GNVVH+EPSNVL+LTG+AS +N+L+++++RVD Sbjct: 126 RVVRMENVPVRELAPLLRQLNDATGIGNVVHFEPSNVLLLTGKASVVNRLVDLVQRVDRS 185 Query: 188 GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 G ++++I+ L YASA++L+++LN L +E K Q L+ K+VAD+ TNSL+ISG E+A Sbjct: 186 GVQRREIVPLHYASAKELSDMLNNLNNEEQ-KGQNAPQLATKVVADEETNSLVISGSEEA 244 Query: 248 RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 R R +L+ LD E++ EGNTRV+YLKYA A +V VLTG+ E++KD+ G A+ S A Sbjct: 245 RARTRTLIAQLDREQNNEGNTRVFYLKYANAAKVVPVLTGIGEQMKDKPGAAKSKSPVAA 304 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 D + ITADE TNSLVITA +V L VI +LDIRR QVLVEAII EVQDG G +LGV Sbjct: 305 TD-LNITADESTNSLVITAQPNVMNSLEKVIDKLDIRRPQVLVEAIIAEVQDGAGTDLGV 363 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW 427 QW +K+ G QF TGLPI KNG I N + GMA GFFNGD+ Sbjct: 364 QWTSKH-GGVQFGATGLPIGQV--------KNGTIKGVN--------FTGMATGFFNGDF 406 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTV 487 G L+TAL++N KNDIL+TPS+VTLDNK ASFNVGQDVPVLSGSQTT+GDNVFNTVERKTV Sbjct: 407 GALMTALSTNGKNDILSTPSVVTLDNKEASFNVGQDVPVLSGSQTTTGDNVFNTVERKTV 466 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS--NSTLGPTFNTRTIQNAVLVKTGETVVL 545 GTKLK+ PQ+N+GD + ++IEQEVSSVD+SS +S+LGPTFNTRTI N V+V +G+TVVL Sbjct: 467 GTKLKILPQINDGDMIHMKIEQEVSSVDASSTEDSSLGPTFNTRTINNEVMVHSGQTVVL 526 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL+++ +K+ VSKVPLLGDIPLVGQLFRYTS + KRNLMVFI T++RDDD Y + SK Sbjct: 527 GGLIENVTKQNVSKVPLLGDIPLVGQLFRYTSQDTTKRNLMVFIHTTVLRDDDNYSAASK 586 Query: 606 EKYTRYRQEQQQRIDGKSKALVGSED---LPVLDE--NTFNSHAPAPSSR 650 EKY + R QQQR++ K ++ D LP NT ++ APA +SR Sbjct: 587 EKYDQVRARQQQRMEEKKMGILEPGDNAILPAFPSPVNT-STAAPATASR 635 >UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gammaproteobacteria RepID=GSPD_AERHY Length = 678 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/625 (56%), Positives = 460/625 (73%), Gaps = 18/625 (2%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 KG + AAL+M AG A +Y A+F NADI +F+ VG++L KTI+I+PSV+G Sbjct: 4 KGKGWRLATVAAALMM--AGSAWATEYSASFKNADIEEFINTVGKNLSKTIIIEPSVRGK 61 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 I+VRS D ++++YYQFFLS+LD+YG++V+ +DNG LKVVRS + KTS + D + PG+ Sbjct: 62 INVRSYDLLNEEQYYQFFLSVLDVYGFAVVPMDNGVLKVVRSKDAKTSAIPVVDETNPGI 121 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 GDE+VTR+VP+ NV R+LAPLLRQ+ D GNVVHY+PSNVL++TGRA+ +N+L+EV+ Sbjct: 122 GDEMVTRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYDPSNVLLITGRAAVVNRLVEVV 181 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQ---MPALLSAKIVADKRTNS 238 +RVD G ++ II L+YASA ++ ++ L G SQ LL+ K+VAD+RTNS Sbjct: 182 RRVDKAGDQEVDIIKLKYASAGEMVRLVTNL--NKDGNSQGGNTSLLLAPKVVADERTNS 239 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK-- 296 +++SG KAR RI +++ LD + +GNTRV+YLKY KA ++VEVL GVS ++ +K Sbjct: 240 VVVSGEPKARARIIQMVRQLDRDLQSQGNTRVFYLKYGKAKDMVEVLKGVSSSIEADKKG 299 Query: 297 ---GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 +S +AI+ADE TN+LVITA V +L V+A+LDIRRAQVLVEAI Sbjct: 300 GGTATTAGGGASIGGGKLAISADETTNALVITAQPDVMAELEQVVAKLDIRRAQVLVEAI 359 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 IVE+ DG+GLNLGVQWAN N G QFTN G I + A DYK NG T + F Sbjct: 360 IVEIADGDGLNLGVQWANTNGGGTQFTNAGPGIGSVAIAAKDYKDNGTTTGLAKLAENF- 418 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ-T 472 NGMAAGF+ G+W +L+TAL++N K+DIL+TPSIVT+DNK ASFNVGQ+VPV +G+Q + Sbjct: 419 --NGMAAGFYQGNWAMLVTALSTNTKSDILSTPSIVTMDNKEASFNVGQEVPVQTGTQNS 476 Query: 473 TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST--LGPTFNTRT 530 TSGD F+T+ERKTVGTKL VTPQ+NEGD+VLL IEQEVSSV + T LGPTF+TRT Sbjct: 477 TSGDTTFSTIERKTVGTKLVVTPQINEGDSVLLTIEQEVSSVGKQATGTDGLGPTFDTRT 536 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 ++NAVLVK+GETVVLGGL+D+ +KE+VSKVPLLGDIP++G LFR TS +KRNLMVFIR Sbjct: 537 VKNAVLVKSGETVVLGGLMDEQTKEEVSKVPLLGDIPVLGYLFRSTSNNTSKRNLMVFIR 596 Query: 591 PTIIRDDDVYRSLSKEKYTRYRQEQ 615 PTI+RD +VY +S KYT +R +Q Sbjct: 597 PTILRDANVYSGISSNKYTLFRAQQ 621 >UniRef50_C4L998 General secretion pathway protein D n=2 Tax=Bacteria RepID=C4L998_TOLAT Length = 685 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/642 (52%), Positives = 462/642 (71%), Gaps = 45/642 (7%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 + CL L + A AE Y A+F DI++F+ VG++LGKTI++DPSV+GTI+VRS Sbjct: 10 VIGCLCTQLGISPALAAE---YSASFKGTDIQEFINTVGKNLGKTIIVDPSVRGTINVRS 66 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 D ++++YYQFFLS+LD+YG++V+ + NG LKVV++ N KTS +AD +R G GDE+V Sbjct: 67 YDLLNEEQYYQFFLSVLDVYGFAVVPMPNGILKVVKAQNAKTSSIPVADETRTGSGDEMV 126 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 TR+VP+ NV R+LAPLLRQ+ D GNVVHYEPSNVL+LTGRA+ +N+L+E+++RVD Sbjct: 127 TRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYEPSNVLLLTGRAAVVNRLVEIVRRVDK 186 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 +G E +I L+YASA ++ ++ L + K+ + +L+ K+VAD+RTN+++ISG + Sbjct: 187 VGDENVDVIKLKYASAGEMVRLITALT--KNDKNALTNVLTPKVVADERTNAVVISGENQ 244 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 RQRI ++++ LD E+ +GNTRV+YLKYA A NLVEVL+G S+ +++EK S+SG Sbjct: 245 GRQRIVTMIRQLDREQQTQGNTRVFYLKYANAKNLVEVLSGTSKTIQNEKN-----SASG 299 Query: 307 AM------------------------DNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 +M +++I ADEQTN+LVITA V ++L +IA+LD Sbjct: 300 SMTATGNTADSASSSGSGSSSSGYNGKDLSIVADEQTNALVITAQPDVMQELERIIAKLD 359 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGI 402 IRRAQVLVEAIIVE+QDG+ LN GVQWAN N G QFT TGLP A +++ +G Sbjct: 360 IRRAQVLVEAIIVEIQDGDTLNFGVQWANTNGGGTQFTATGLPTTTVANAANEWRNDG-- 417 Query: 403 TSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 ++ + S++NG+ AGF+ G+W L+TAL+SN K++ILATPSIVTLDNK A+FNVGQ Sbjct: 418 ELSSTSTAALSSFNGLVAGFYEGNWAGLVTALSSNTKSNILATPSIVTLDNKEAAFNVGQ 477 Query: 463 DVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV---------SS 513 +VPV++GSQ+++ +V++TVERKTVGTKLKVTPQ+NEGD+VLLE+EQEV S Sbjct: 478 EVPVVTGSQSSTAGSVYSTVERKTVGTKLKVTPQINEGDSVLLEVEQEVSSVASSSSTDS 537 Query: 514 VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLF 573 SSSNS+LG TFNTRT++N+VLVK+GETVVLGGLL + + E V KVPLLGDIP++G LF Sbjct: 538 SSSSSNSSLGSTFNTRTVKNSVLVKSGETVVLGGLLSNNTSESVYKVPLLGDIPILGYLF 597 Query: 574 RYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 RY T K+NLMVFI PTI+RD Y +S KY +R EQ Sbjct: 598 RYNGTSTTKQNLMVFIHPTILRDPVTYTGVSSSKYNLFRAEQ 639 >UniRef50_P31701 General secretion pathway protein D n=27 Tax=Enterobacteriaceae RepID=GSPD_PECCC Length = 650 Score = 628 bits (1619), Expect = e-178, Method: Compositional matrix adjust. Identities = 317/613 (51%), Positives = 441/613 (71%), Gaps = 10/613 (1%) Query: 9 CCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSND 68 L ++L+ + A + ++ A+F DI++F+ V ++L KT++IDPSV GTI+VRS D Sbjct: 2 LLLSGSVLLMASSLAWSAEFSASFKGTDIQEFINTVSKNLNKTVIIDPSVSGTITVRSYD 61 Query: 69 TFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTR 128 ++++YYQFFLS+LD+YG++VI +DN LK++RS + K++ +A +PG+GDE+VTR Sbjct: 62 MMNEEQYYQFFLSVLDVYGFTVIPMDNNVLKIIRSKDAKSTSMPLATDRQPGIGDEVVTR 121 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 +VP+ NV ARD R++ D G YEP+NV+++TGRA I+ ++ +++RVD G Sbjct: 122 VVPVNNVAARDFGRSSRELNDNAWRGTCGDYEPANVVVMTGRAGVIHAVMTIVERVDQTG 181 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 I L YAS+ ++ +++N+L ++ KS +P +L+A +VAD+RTNS G +R Sbjct: 182 DRNVTTIPLSYASSTEVVKMVNEL-NKMDEKSALPGMLTANVVADERTNSAAGFGEPNSR 240 Query: 249 QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM 308 QR+ ++K LD +++ +GNT+V YLKYAKA +LVEVLTGV + ++ ++ NA Sbjct: 241 QRVIDMVKQLDRQQAVQGNTKVIYLKYAKAADLVEVLTGVGDSIQTDQQNALP----ALR 296 Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 +++I A EQTNSL++ A + L VIA+LDIRR QVLVEAII EVQD +G+NLGVQ Sbjct: 297 KDISIKAHEQTNSLIVNAAPDIMRDLEQVIAQLDIRRPQVLVEAIIAEVQDADGMNLGVQ 356 Query: 369 WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWG 428 WANKN G QFTNTGLPI G ++++G + +A A +NG+AAGF+ G+WG Sbjct: 357 WANKNAGVTQFTNTGLPITTMMAGADQFRRDGTLGTA--ATTALGGFNGIAAGFYQGNWG 414 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVG 488 +L+TAL+SN+KNDILATPSIVTLDN A+FNVGQ+VPVL+GSQTTSGDNVF TVERKTVG Sbjct: 415 MLMTALSSNSKNDILATPSIVTLDNMEATFNVGQEVPVLAGSQTTSGDNVFQTVERKTVG 474 Query: 489 TKLKVTPQVNEGDAVLLEIEQE---VSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 KLKV PQ+NEGD+VLLEIEQE V+ SSS++ LG TFNTRT+ NAVLV +G+TVV+ Sbjct: 475 IKLKVKPQINEGDSVLLEIEQEVSSVADAASSSSTNLGATFNTRTVNNAVLVSSGDTVVV 534 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGLLD + E +KVPLLGDIP++G LFR STE KRNLM+FIRP+IIRD ++S S Sbjct: 535 GGLLDKSTNESANKVPLLGDIPVLGYLFRSNSTETKKRNLMLFIRPSIIRDRSQFQSASA 594 Query: 606 EKYTRYRQEQQQR 618 KY + E+ ++ Sbjct: 595 SKYHSFSAEENKQ 607 >UniRef50_A1JPH4 General secretion pathway protein D n=28 Tax=Yersinia RepID=A1JPH4_YERE8 Length = 648 Score = 544 bits (1402), Expect = e-153, Method: Compositional matrix adjust. Identities = 284/605 (46%), Positives = 415/605 (68%), Gaps = 23/605 (3%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 +LAA+ P G+AEN + A+F +ADI++F+ V +++ KTI+IDP VQG +SVRS + Sbjct: 20 VILAAIF-PIVGYAEN--FSASFRDADIKEFINTVSKNINKTIIIDPKVQGLVSVRSYEL 76 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 +++YYQFFL++LD+YGY+V+ + N LKV+ + K S + +++ P GDEL+ R+ Sbjct: 77 LDEEKYYQFFLNVLDVYGYTVVEMPNNILKVIPAKRAKGSVVPLQNNAAPPQGDELINRV 136 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 L+++ A++LAPLLRQ+ D G++V+Y+PSNV+++TGRA+ +N+L +I +D G Sbjct: 137 FKLKHLLAKNLAPLLRQLNDNSESGSIVNYDPSNVILITGRAAVVNRLYAIISTLDQPGE 196 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 + ++ L +A A D+ +++NQ+I+ + ++ + +A +VAD RTNS+IISG R+ Sbjct: 197 TEVELYQLNHAVAADIIKLVNQVINPVNITAKQESFNAATVVADDRTNSVIISGDRHIRK 256 Query: 250 RITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD 309 + ++K LD ++ G+T+V Y+KYA+A+ L++VL GVS+ + +K +K S + Sbjct: 257 KTLQMIKRLDHQQDSYGSTKVVYMKYAQASKLLDVLNGVSQGSQSDK--TKKNSGKSHIK 314 Query: 310 NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW 369 NV+I A +QTN+LVITAD V ++L VI RLD+RRAQVLVEAIIVE Q+G GLNLG+QW Sbjct: 315 NVSIKAYDQTNALVITADPKVMKELDQVIERLDVRRAQVLVEAIIVETQNGEGLNLGIQW 374 Query: 370 ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGV 429 ANK G F Q + N S NP M + G+ AGF+ G+W Sbjct: 375 ANKLYGGANFL----------QKPNSIQTNNN--SGNPIPMMIA---GLTAGFYKGNWDG 419 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 L TALA+N+ N+ILATPSIVTLDN A FNVGQ+VPVL+ +QTT+ D V+N++ R++VG Sbjct: 420 LFTALATNSNNNILATPSIVTLDNMEAEFNVGQEVPVLTSTQTTATDKVYNSISRQSVGV 479 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSN---STLGPTFNTRTIQNAVLVKTGETVVLG 546 LKV PQ+N+GD+VLLEI QEVSSV SS+ + LG FN R + NAVLVK+GETVV+G Sbjct: 480 MLKVKPQINKGDSVLLEIRQEVSSVADSSDVNANNLGSVFNKRVVNNAVLVKSGETVVVG 539 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKE 606 GLLD + ++KVPLLGDIP +G LFR + + K NL++FIRPTI+R+ Y ++ + Sbjct: 540 GLLDKKINKIINKVPLLGDIPFIGGLFRQSKEKIEKSNLILFIRPTILRETSDYSQVTVD 599 Query: 607 KYTRY 611 KY Y Sbjct: 600 KYAEY 604 >UniRef50_A8GJQ5 General secretion pathway protein D n=6 Tax=Enterobacteriaceae RepID=A8GJQ5_SERP5 Length = 660 Score = 540 bits (1391), Expect = e-152, Method: Compositional matrix adjust. Identities = 292/624 (46%), Positives = 414/624 (66%), Gaps = 26/624 (4%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 I + +L+ + + E + ANF DI +F+ + LGKTI+ID +V+G ++VRS Sbjct: 27 IALMAVLVMLLWVSAPVQAEAFSANFKGTDIHEFISTASKALGKTIIIDDAVKGKVTVRS 86 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 + +YYQFFL++LD+YGY+VI++ N LKV+ + + K + + + P GDEL+ Sbjct: 87 YEPLDAGQYYQFFLNVLDVYGYAVISMPNNVLKVIPAKDGKRAA--LNALNTPAEGDELI 144 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 RIVPL N+ A+++APL+RQ D+ +GNVV E N L++TGRA +N L+E+ +D Sbjct: 145 MRIVPLNNIAAKEVAPLMRQFNDSIGIGNVVFLESGNALLITGRADVVNSLVELAHEMD- 203 Query: 187 IGTEKQQIIH--LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 TE+ ++ L++ASA D+ I+ L + + +++ AL K+VAD+RTN+++I+G Sbjct: 204 -RTEQAGVVSVALQHASATDVVSIVTTLFRDEN-RTKKGALPGMKVVADERTNTVLIAGE 261 Query: 245 EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS 304 + RI +++ LD E++ +GNT+V LKYAKA L+EVL+GVS L+DEK S Sbjct: 262 PSLQARIEGIIQQLDQEKASQGNTKVIRLKYAKAQGLLEVLSGVSANLQDEKKTVGNNVS 321 Query: 305 SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN 364 M N+ I ADEQTN+L+I A V L VI +LDIRRAQVLVEA+IVE+Q+ +GLN Sbjct: 322 --VMKNMVIKADEQTNALIINATPDVMSNLEKVIEQLDIRRAQVLVEAVIVEMQNADGLN 379 Query: 365 LGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN 424 LG+QWAN+ G QF N AQ +K GG+T ++F NG+ GF++ Sbjct: 380 LGIQWANRYGGGTQFGNA------QAQIAPGFK--GGMT------EVFKNANGLVTGFYS 425 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVER 484 G+W LLTA+++ ++N+ILATPSI+TLDN+ A F+VGQDVP+L+GSQTT+ DNVFNTV R Sbjct: 426 GNWAGLLTAISNQSQNNILATPSIMTLDNEDAEFSVGQDVPILTGSQTTNSDNVFNTVAR 485 Query: 485 KTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN---STLGPTFNTRTIQNAVLVKTGE 541 KTVG KLKV PQ+N+G +VLL+IEQEVSSV +S+ LG TFN RT+ N VLV++GE Sbjct: 486 KTVGIKLKVKPQINKGQSVLLQIEQEVSSVAENSSVDKDNLGATFNIRTVNNTVLVESGE 545 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 TVV+GGLLD + S VP L IPL+G LFR TS + +KRNL++FIRPT+IR + Y Sbjct: 546 TVVVGGLLDKSQSDSKSAVPFLERIPLLGALFRSTSHKESKRNLILFIRPTVIRSTEEYA 605 Query: 602 SLSKEKYTRYRQEQQQRIDGKSKA 625 S K R+R Q + K+ A Sbjct: 606 QESMRKAARFRSLDAQPLPLKTHA 629 >UniRef50_C4UIB8 General secretion pathway protein D n=4 Tax=Yersinia RepID=C4UIB8_YERRU Length = 674 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 284/610 (46%), Positives = 396/610 (64%), Gaps = 24/610 (3%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 L+ + + +A + + FN+ADI++F+ V + L KTI+IDP VQG ISVRS + Sbjct: 37 VLVTLVFVIYTSNAYSSDFSVKFNDADIKEFINTVSKSLNKTIIIDPKVQGLISVRSYER 96 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 +++YYQFFL++LD++G++V+ + N LKV+ S K+S I GDEL+ RI Sbjct: 97 LDKEKYYQFFLNVLDVHGFTVLEMPNNILKVIPSKRAKSSAPPILMKDDIFNGDELINRI 156 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 +PL+ + A+++ PLLRQ+ D G+V HYEP+N L++TGRA T+ +L+E+I D G Sbjct: 157 IPLKYISAKNVTPLLRQLNDNTDSGSVAHYEPTNSLLITGRAGTVKRLVEIISEFDREGE 216 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 + L YASA ++ +++ +L+ + Q A + K+VAD+RTNS++ISG +R+ Sbjct: 217 SSVDMYKLAYASATEVTKLVTELLRPNVAGKQDTAQM-VKVVADERTNSILISGDPASRK 275 Query: 250 RITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD 309 S++K LD E+ GNT+V YLKYAKA L++VL GVS +KDEK S++ + Sbjct: 276 SAESMIKKLDKEQISHGNTKVIYLKYAKAEKLLDVLNGVSVSIKDEKKKVSHISNT--IK 333 Query: 310 NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW 369 I AD+QTNSL+ITA +V L VI +LDIRRAQVLVEAIIVE QDG G+NLG+QW Sbjct: 334 KSMIKADDQTNSLIITASPNVMYDLEKVIEKLDIRRAQVLVEAIIVEAQDGEGINLGIQW 393 Query: 370 --ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW 427 K VG G Y K+ N + + +G+ GF+ G+W Sbjct: 394 DTKQKKVG----------------GFISYNKSNLGNIQNGVTSIANGISGLTTGFYRGNW 437 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTV 487 L TALA+N+ N+ILATPSIVTLDN A F+VGQ+VPVLS QTTS D V+NT+ R++V Sbjct: 438 SGLFTALATNSSNEILATPSIVTLDNMDAEFSVGQEVPVLSSQQTTSTDKVYNTISRQSV 497 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN---STLGPTFNTRTIQNAVLVKTGETVV 544 G LKV PQ+N+GD+VLLEI QEVSSV +SN +G TFN R + NAVLVK+GETVV Sbjct: 498 GIMLKVKPQINKGDSVLLEIRQEVSSVAENSNVDKDNIGSTFNKRVVNNAVLVKSGETVV 557 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 +GGLLD ++K+PLLGDIP++G LFR + KRNL++FI+PTIIR+ D Y S + Sbjct: 558 VGGLLDKKVSNVINKIPLLGDIPIIGNLFRQKKEKIEKRNLILFIKPTIIRESDDYLSTT 617 Query: 605 KEKYTRYRQE 614 EK + ++ Sbjct: 618 SEKSKTFNEK 627 >UniRef50_A8A4B9 General secretion pathway protein D n=30 Tax=Escherichia RepID=A8A4B9_ECOHS Length = 686 Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust. Identities = 288/632 (45%), Positives = 417/632 (65%), Gaps = 25/632 (3%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 AE + ANF + D++ F+E VG +L KTI++ P VQG +S+R+ ++++YYQ FL++ Sbjct: 40 AEEATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNL 99 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSP-GMIADSSRPGVGDELVTRIVPLENVPARDLA 141 L+ GY+V+ ++N LKVV+S+ K P ++ + S GDE+VT++VP+ NV R+LA Sbjct: 100 LEAQGYAVVPMENDVLKVVKSSAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELA 159 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 P+LRQM+D+ GNVV+Y+PSNV++LTGRAS + +L EVI+ VD G +++I L+ AS Sbjct: 160 PILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQSVDHAGNRTEEVIPLDNAS 219 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 A ++A +L L +++ G++Q PA L ++IVAD+RTNS+I+SG R ++ L++ LD E Sbjct: 220 ASEIARVLESL-TKNSGENQ-PATLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDSE 277 Query: 262 ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNS 321 GN++V+YLKY+KA +LV+VL VS L K A SG + V+I A + +N+ Sbjct: 278 MERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEEAEGTVGSG-REIVSIAASKHSNA 336 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 L++TA Q + + L +VI +LDIRRAQV VEA+IVEV +G+ +N GVQWA+K+ G QF N Sbjct: 337 LIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAEGSNINFGVQWASKDAGLMQFAN 396 Query: 382 -TGLPIFNAAQGVADYK--------KNGGITSANPAWD--------MFSAYNGMAAGFFN 424 T +PI ++ K G T+ NP + + S ++G A G Sbjct: 397 GTQIPIGTLGAAISQAKPQKGSTVISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVK 456 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-NVFNTVE 483 GDW L+ A+ +++ +++L+TPSI TLDN+ A F VGQDVPVL+GS S + N FNTVE Sbjct: 457 GDWMALVQAVKNDSSSNVLSTPSITTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVE 516 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETV 543 RK VG LKVTPQ+NEG+AV + IEQEVS V+ ++L F R ++ VL GE + Sbjct: 517 RKKVGIMLKVTPQINEGNAVQMVIEQEVSKVE--GQTSLDVVFGERKLKTTVLANDGELI 574 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 VLGGL+DD + E V+KVPLLGDIPL+G LF+ T+ ++ KRNLMVFIRPTI+RD + Sbjct: 575 VLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADKKEKRNLMVFIRPTILRDGMAADGV 634 Query: 604 SKEKYTRYRQEQQQRIDGKSKALVGSEDLPVL 635 S+ KY R EQ R D + +L+ PVL Sbjct: 635 SQRKYNYMRAEQIYR-DEQGLSLMPHTAQPVL 665 >UniRef50_P45779 General secretion pathway protein D n=102 Tax=Proteobacteria RepID=GSPD_VIBCH Length = 674 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 295/656 (44%), Positives = 430/656 (65%), Gaps = 27/656 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK K + LLA L+ NE + A+F DI++F+ IVG++L KTI++DPSV+G Sbjct: 1 MKYWLKKSSWLLAGSLLSTPLAMANE-FSASFKGTDIQEFINIVGRNLEKTIIVDPSVRG 59 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 + VRS DT ++++YY FFLS+L++YG++V+ +DNG LKV++S + KTS + Sbjct: 60 KVDVRSFDTLNEEQYYSFFLSVLEVYGFAVVEMDNGVLKVIKSKDAKTSAIPVLSGEERA 119 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 GDE++T++V ++NV R+L+PLLRQ++D GNVVHY+P+N++++TGRA+ +N+L E+ Sbjct: 120 NGDEVITQVVAVKNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEI 179 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 I+RVD G ++ +++ L ASA ++ I+ L +++ P L K VAD+RTNS++ Sbjct: 180 IRRVDQAGDKEIEVVELNNASAAEMVRIVEAL-NKTTDAQNTPEFLKPKFVADERTNSIL 238 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 ISG K R+R+ L+K LDVE + +GN RV YLKYAKA +LVEVL GVSE L+ EKG Sbjct: 239 ISGDPKVRERLKRLIKQLDVEMAAKGNNRVVYLKYAKAEDLVEVLKGVSENLQAEKGTG- 297 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 +P++S + V I A TNSLV+TA Q + + VI +LDIRRAQVL+EA+IVE+ +G Sbjct: 298 QPTTS-KRNEVMIAAHADTNSLVLTAPQDIMNAMLEVIGQLDIRRAQVLIEALIVEMAEG 356 Query: 361 NGLNLGVQWANKNVGAQ-QFTNTGLPIFNAAQGVADYK----------------KNGGIT 403 +G+NLGVQW + G+ Q+ NTG I N G+ + K +N T Sbjct: 357 DGINLGVQWGSLESGSVIQYGNTGASIGNVMIGLEEAKDTTQTKAVYDTNNNFLRNETTT 416 Query: 404 SANPAWDMFSAYN---GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNV 460 + + SA + G A GDW L+ A+++++ ++IL++PSI +DN ASF V Sbjct: 417 TKGDYTKLASALSSIQGAAVSIAMGDWTALINAVSNDSSSNILSSPSITVMDNGEASFIV 476 Query: 461 GQDVPVLSGSQTTS-GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN 519 G++VPV++GS S DN F TV+RK VG KLKV PQ+NEG++V L IEQEVS+V +N Sbjct: 477 GEEVPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGNSVQLNIEQEVSNV-LGAN 535 Query: 520 STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE 579 + F R + +V+V+ G+ +VLGGL+D+ + E SKVPLLGDIPL+GQLFR TS++ Sbjct: 536 GAVDVRFAKRQLNTSVMVQDGQMLVLGGLIDERALESESKVPLLGDIPLLGQLFRSTSSQ 595 Query: 580 RAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVL 635 K+NLMVFI+PTIIRD +++ KY R EQ R + K L+ +PVL Sbjct: 596 VEKKNLMVFIKPTIIRDGVTADGITQRKYNYIRAEQLFRAE-KGLRLLDDASVPVL 650 >UniRef50_Q8VPC8 Hypothetical type II secretion protein n=6 Tax=Enterobacteriaceae RepID=Q8VPC8_ECOLX Length = 616 Score = 503 bits (1295), Expect = e-141, Method: Compositional matrix adjust. Identities = 276/601 (45%), Positives = 395/601 (65%), Gaps = 25/601 (4%) Query: 54 IDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSP-GM 112 + P VQG +S+R+ ++++YYQ FL++L+ GY+V+ ++N LKVV+S+ K P + Sbjct: 1 MGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKSSAAKVEPLPL 60 Query: 113 IADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAS 172 + + S GDE+VT++VP+ NV R+LAP+LRQM+D+ GNVV+Y+PSNV++LTGRAS Sbjct: 61 VGEGSDNYAGDEMVTKVVPVRNVSVRELAPILRQMIDSAGSGNVVNYDPSNVIMLTGRAS 120 Query: 173 TINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVA 232 + +L EVI+RVD G +++I L+ ASA ++A +L L S G++Q PA L ++IVA Sbjct: 121 VVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNS-GENQ-PATLKSQIVA 178 Query: 233 DKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 D+RTNS+I+SG R ++ L++ LD E GN++V+YLKY+KA +LV+VL VS L Sbjct: 179 DERTNSVIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTL 238 Query: 293 KDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEA 352 K A SG + V+I A + +N+L++TA Q + + L +VI +LDIRRAQV VEA Sbjct: 239 TAAKEEAEGTVGSG-REIVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEA 297 Query: 353 IIVEVQDGNGLNLGVQWANKNVGAQQFTN-TGLPIFNAAQGVADYK--------KNGGIT 403 +IVEV +G+ +N GVQWA+K+ G QF N T +PI ++ K G T Sbjct: 298 LIVEVAEGSNINFGVQWASKDAGLMQFANGTQIPIGTLGAAISQAKPQKGSTVISENGAT 357 Query: 404 SANPAWD--------MFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKL 455 + NP + + S ++G A G GDW L+ A+ +++ +++L+TPSI TLDN+ Sbjct: 358 TINPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSITTLDNQE 417 Query: 456 ASFNVGQDVPVLSGSQTTSGD-NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV 514 A F VGQDVPVL+GS S + N FNTVERK VG LKVTPQ+NEG+AV + IEQEVS V Sbjct: 418 AFFMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKV 477 Query: 515 DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFR 574 + ++L F R ++ VL GE +VLGGL+DD + E V+KVPLLGDIPL+G LF+ Sbjct: 478 E--GQTSLDVVFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFK 535 Query: 575 YTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPV 634 T+ ++ KRNLMVFIRPTI+RD +S+ KY R EQ R D + +L+ PV Sbjct: 536 STADKKEKRNLMVFIRPTILRDGMAADGVSQRKYNYMRAEQIYR-DEQGLSLMPHTAQPV 594 Query: 635 L 635 L Sbjct: 595 L 595 >UniRef50_C6EGE1 General secretory pathway component, cryptic n=2 Tax=Escherichia coli RepID=C6EGE1_ECOBD Length = 338 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/198 (100%), Positives = 198/198 (100%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG Sbjct: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG Sbjct: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV Sbjct: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 Query: 181 IKRVDVIGTEKQQIIHLE 198 IKRVDVIGTEKQQIIHLE Sbjct: 181 IKRVDVIGTEKQQIIHLE 198 Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 130/130 (100%), Positives = 130/130 (100%) Query: 521 TLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTER 580 TLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTER Sbjct: 209 TLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTER 268 Query: 581 AKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTF 640 AKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTF Sbjct: 269 AKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTF 328 Query: 641 NSHAPAPSSR 650 NSHAPAPSSR Sbjct: 329 NSHAPAPSSR 338 >UniRef50_C6CIN5 General secretion pathway protein D n=1 Tax=Dickeya zeae Ech1591 RepID=C6CIN5_DICZE Length = 696 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 234/649 (36%), Positives = 355/649 (54%), Gaps = 83/649 (12%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 +T + +L A + N +Y A+F +I++FV Q L K I+IDPSV G ISVRS Sbjct: 26 MTTDDVHSLAATTAANTSN-KYSASFREVEIKEFVATAAQVLKKNIIIDPSVTGQISVRS 84 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 D + +Y+ FFL++++ YGYSV+ +DN L +V A + ++ R +V Sbjct: 85 YDDLDETQYFVFFLNVMETYGYSVVQIDNHTLNIVPLAQSLRAAWTEGNTGRE---KNIV 141 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 R+ ++ +P +L P+L ++ + +V + +Y P N+ I TGR + +L++++ +VD Sbjct: 142 VRLAKMDALPGSELEPILSRISEDVAV-KLKYYSPGNLFIFTGREDVVKRLVDIVNQVDN 200 Query: 187 IGTEKQ-QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIV-ADKRTNSLIISGP 244 + + ++ A A D+A+ L +S K+ P A ++ + T ++++ G Sbjct: 201 ARKDNSPAVFNVSRAKASDIAKSL-----QSAFKNLSPEDKDAPLIYGNDATRTIVVKGS 255 Query: 245 EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT----GVSE---------- 290 + I L+ ++DV + + +RV++LKYA A + ++ T G SE Sbjct: 256 AHVKTEIRRLISTMDVPDQQ---SRVFFLKYADAAQMAKLFTNNQSGSSEPGLLPMAGDS 312 Query: 291 ------KLKDEK-----------------GNARKPSSSGAMDN---------------VA 312 +L ++ GN P S N + Sbjct: 313 GMSMDAQLAQQQPGGMSSGQPVNPDGQAAGNGTAPVSGAGFSNDLGSLFGGGDALVRQIR 372 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 + AD N+L+++A + A++I +LD+R QVLVEAI+VEVQ GLNLG+ W N+ Sbjct: 373 VHADRDNNALIVSAPPDAMRQAASIIRQLDVRHEQVLVEAIVVEVQQAEGLNLGIAWGNR 432 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 N G F + + G NP + G+ AGF++G+WG L Sbjct: 433 NYGGSNFNSVNV--------------GNGFNQPNPLVNALKGTEGLVAGFYHGNWGTLFN 478 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLK 492 AL SN +N+ILATPS+VTLDN A FNVGQDVP+L+GSQTT+ DN+FNTV+R+T+G K Sbjct: 479 ALESNKRNNILATPSVVTLDNHRAEFNVGQDVPILTGSQTTNNDNIFNTVQRRTIGIKFS 538 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSS--NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 + P++N+ +LL I QE+SS+ ++ NS LG FN RT+ N V V+ ETVV+GGLLD Sbjct: 539 ILPRINQSGTILLNISQEISSLSDTAQVNSNLGSVFNIRTVNNVVQVQDDETVVIGGLLD 598 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 D KE +KVPLLGDIP +G LFRYTS KRNLM+FIRP IIR + V Sbjct: 599 DEKKETTNKVPLLGDIPWLGNLFRYTSQNNDKRNLMLFIRPRIIRGNGV 647 >UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified Gammaproteobacteria RepID=A0Z790_9GAMM Length = 696 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 253/646 (39%), Positives = 368/646 (56%), Gaps = 26/646 (4%) Query: 9 CCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSND 68 LL A + ++Y N + DI++ ++ V G TI++DPSV+G I V S+ Sbjct: 34 IMLLVATSLSSIQTVSAQEYTVNLQDTDIQELIKFVADVTGATIVVDPSVKGKIKVVSSR 93 Query: 69 TFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTR 128 ++ E Y FLSILD+ GY+ + N ++V+ + + ++SP + S DE VT+ Sbjct: 94 PVNKSELYDLFLSILDVQGYTAVRTGN-VIRVIPNKDARSSPVEVPSSGAMSSNDEYVTQ 152 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 ++ LEN+ A L P+LR ++ + ++ Y PSN +I++ AS I +++E+I R+D Sbjct: 153 VIRLENISAAKLIPVLRPLVPQQA--HMAAYAPSNAIIISDIASNIRRIVEIIDRMDRSA 210 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 + Q+I L YA AED+ ++L L +S G + +VADKRTNS++++ E Sbjct: 211 IQGTQVIKLRYAVAEDVVQMLQTLEKQSRGDG-AESNDEVTLVADKRTNSVVVTADELNS 269 Query: 249 QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL-KDEKGNARKPSSSGA 307 QRI L+ LD + GN +V YL+YA A + EVLT V + + + + G RKPS++ Sbjct: 270 QRILDLVTYLDTPLEQSGNVKVVYLEYADAVEVAEVLTRVMQNMSRLDTGGDRKPSTNT- 328 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 N I ADE TN+L+ITAD L VIARLDIRRAQVLVEAIIVE++ G LG+ Sbjct: 329 --NSTIEADEGTNALIITADADEMASLEAVIARLDIRRAQVLVEAIIVEMEITEGQELGL 386 Query: 368 QWANKN----VGAQQFTNTGLPIFNAAQG---VADYKKNGGITSANPAWDMFSAYNGMAA 420 QW + G+ T++ NAA G + D N I + A S G Sbjct: 387 QWIFADDSGAFGSNVSTSSAQQQRNAAIGNALLGDENSNADIGVRDLA-GALSQVPGTTL 445 Query: 421 GF-FNGD---WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG- 475 G+ GD V+L AL + +IL+TPS++TLDN+ A VGQ+VP ++GS + +G Sbjct: 446 GWGVVGDDLSMSVILNALETQGNANILSTPSLLTLDNQEAYITVGQNVPFVTGSYSNTGG 505 Query: 476 ----DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTI 531 N F T+ER+ VG LKVTPQVNEGD+V+L+I QEVSS+ + N R I Sbjct: 506 ASNVQNPFQTIERENVGITLKVTPQVNEGDSVVLDIVQEVSSISQQLLAAADVITNERKI 565 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 + V+ + G+ VVLGGL+ D ++ VP L DIPL+G+LFR K NL+VFIRP Sbjct: 566 ETKVMAQDGDVVVLGGLVKDDVQDSQQGVPFLQDIPLLGRLFRNDVVSVTKSNLLVFIRP 625 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 TI+RDD+ R + EKY RY ++QQ + + +LPVL E Sbjct: 626 TIVRDDESLRGATAEKY-RYIRDQQAERRARGIMFLDDGNLPVLPE 670 >UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0C8_9DELT Length = 690 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 241/645 (37%), Positives = 368/645 (57%), Gaps = 55/645 (8%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 P G AE NF ADI + V + GKT ++DP+V+G I++ S+ E Y Sbjct: 39 PRPGQAET--ITLNFKEADIESVINSVARITGKTFIVDPAVRGNITIVSSQPMRADEVYG 96 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV--GDELVTRIVPLENV 135 FLSIL ++ Y+ + N +K++ +A + AD+ P D +VTRI L+ + Sbjct: 97 VFLSILQVHDYAAVEAGN-VVKIIPAAKAGQDLVITADAEHPLELEEDRIVTRIYRLQYL 155 Query: 136 PARDLAPLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ 193 A L P+LR M+ G + + E N LI T RA T+ +L+ +++R+D + + Sbjct: 156 QADRLVPILRPMLGTRTGQMSALAVKE-GNALIFTERAGTVERLLRIVRRLDQSSGGEME 214 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 I+ LE+A A D+ ++ ++ G ++ A ++VAD RTNS+++ G R+ + Sbjct: 215 IVTLEHADARDVVSVIREM---ELGTGRLSAE-QLRLVADSRTNSVLLQGDPYHLLRVKA 270 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE---KLKDEKGNARKPSSSGAMDN 310 + LD ++ G+T+V +L++AKA +LV +LTG+ + ++ +G R+ + Sbjct: 271 TILHLDTPLAKGGDTQVVFLRHAKAEDLVPILTGMGKYDGSREERRGQQRQ--------D 322 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW- 369 V I AD TN+L++T +V + L TVI +LDIRRAQ+++EA+I E+ ++LG+QW Sbjct: 323 VDIQADANTNALIMTGPPAVLQNLQTVIRQLDIRRAQLMIEAVIAEISTARAVDLGIQWF 382 Query: 370 ---ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD 426 A+K +G F +G + A G G I + + G G F+G Sbjct: 383 SADADKVIGGTNFPGSGASMSGIAAG-----DEGSIAA-------LAGLGGFNMGVFSGS 430 Query: 427 ----------WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS-- 474 +G L+ ALA + +IL+TPS+VT+DN+ A VGQ+VP L+GS T Sbjct: 431 TEILGREFFSFGALVNALARDGDTNILSTPSLVTMDNQEAEIIVGQNVPFLTGSFTEGAT 490 Query: 475 --GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQ 532 G + F TVER+ VG KL+V PQV EGD + L+IEQEVSSV+ + G NTR I Sbjct: 491 GVGGSPFQTVERRDVGIKLRVKPQVTEGDVIRLQIEQEVSSVERDDLAA-GLVTNTRNIN 549 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 +VLV+ G+ +VLGGL+ D +E VSKVPLLGDIPL G LFR+T +ER+KRNLMVF+RP Sbjct: 550 TSVLVEDGKVLVLGGLISDDVQETVSKVPLLGDIPLFGALFRHTRSERSKRNLMVFLRPV 609 Query: 593 IIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 I+RD ++ +S+ +Y RQ+Q +R D K L+ ++ PVL E Sbjct: 610 ILRDQEMSSRISQGQYDMLRQQQLER-DSKGVKLMPGQNQPVLLE 653 >UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVD5_9GAMM Length = 694 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 246/627 (39%), Positives = 373/627 (59%), Gaps = 24/627 (3%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 A A+ E + N +ADI + V + G+ +IDP V+ ++V S+ S E Y+ F Sbjct: 34 AQAADEESFTLNLKDADIEALISTVAKKTGRNFVIDPRVKARVTVISSQAMSGNELYEVF 93 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 SIL ++GY+ + + +K++ N K + ++ G+GD+LVT+++P+ NV A Sbjct: 94 QSILQVHGYAAVPAGD-VIKILPEVNAKQG-AVPTITNGQGMGDDLVTQVIPIRNVAAAQ 151 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY 199 L P+LR ++ G++ Y SN++++T RAS I++L ++I R+D ++ + I LE+ Sbjct: 152 LVPILRPLVP--QQGHLAAYSGSNIIVITDRASNISRLADIIGRIDRPDNDEIESIQLEH 209 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD 259 ASA +L I+N L S G ++ + + ++ AD+RTNS++ISG + AR RI L+ S+D Sbjct: 210 ASAPELVRIINSL---SQGGNKGAEVDTPQLAADERTNSILISGSKAARDRIKKLIASMD 266 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN---VAITAD 316 + GNT+V YLKYAKA ++ E+L GV+E K A +++ + + V I AD Sbjct: 267 TPLEQGGNTKVVYLKYAKAEDMAEILKGVNEGQKKAAEAAGGKAAAATVSSDKEVDIQAD 326 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW--ANKNV 374 TNSL+ITA + +V+ +LDIRRAQV VEAIIVEV D LG + AN+N Sbjct: 327 PGTNSLIITAAPDALRNIESVVRQLDIRRAQVHVEAIIVEVSDTAARELGFSYLFANEN- 385 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-----WGV 429 F N P+ A G NG ++ S NG GF + D + Sbjct: 386 ---GFDNETNPVGGALLGGGGDVINGIAAASTGDGSGASVPNGFTVGFGDRDNSGNVFAG 442 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS---GDNVFNTVERKT 486 +L A+AS+ + ++L+TPSIVTLDN+ A VGQ+VP ++GS TT+ +N F TVER+ Sbjct: 443 ILRAVASDTEANLLSTPSIVTLDNEEAEIVVGQNVPFVTGSYTTASSGANNPFQTVERQD 502 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLG 546 VG LK+TPQ+NEGD + L+IEQE SSV SS ++ N R I+ +V+++ G+ +VLG Sbjct: 503 VGVTLKITPQINEGDVIRLDIEQEASSVVESSVASGQLITNKREIKTSVMIEDGQMLVLG 562 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKE 606 GL+DD +++ + KVPLLGDIPL+G+LF+Y + KRNLMVF+ P I+RD + S+E Sbjct: 563 GLIDDQTRKSLFKVPLLGDIPLLGRLFQYRTNSNDKRNLMVFLHPKILRDRLSADATSQE 622 Query: 607 KYTRYRQEQQQRIDGKSKALVGSEDLP 633 KY R Q++ D K V + LP Sbjct: 623 KYQFMRGRQREAGDIKPIFNVSTAALP 649 >UniRef50_P31700 General secretion pathway protein D n=5 Tax=Enterobacteriaceae RepID=GSPD1_ERWCH Length = 712 Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust. Identities = 193/335 (57%), Positives = 246/335 (73%), Gaps = 8/335 (2%) Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 V + A +QTNSL+IT + L VI +LDIRR QVLVEAII E+QD +GLNLG+QWA Sbjct: 363 VTVRAHDQTNSLIITRPPDIMRDLEQVINQLDIRRPQVLVEAIIAEIQDADGLNLGIQWA 422 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 NK G QFTNTG+PI A G ++ +G +T+A + S +NG+ AGF+ G+W +L Sbjct: 423 NKRAGMTQFTNTGIPISTAMIGTDQFRSDGTLTTAYAS--ALSNFNGITAGFYRGNWSML 480 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT--SGDNVFNTVERKTVG 488 LTAL+S+ KND+LATPSIVTLDN A+FNVGQ+VPVL+GSQTT SGDN+FNTVERKTVG Sbjct: 481 LTALSSDGKNDVLATPSIVTLDNMEATFNVGQEVPVLTGSQTTVGSGDNIFNTVERKTVG 540 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSV---DSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 KL+V PQ+NEGD+VLL+IEQEVSSV + SSNS+LG TFNTRT+ NAV+V ETVV+ Sbjct: 541 IKLRVKPQINEGDSVLLQIEQEVSSVAEGNGSSNSSLGVTFNTRTVNNAVMVTNRETVVV 600 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGLLD + E +KVPLLGDIP +G LFR + +KRNLM+F+RPTIIRD Y+ S Sbjct: 601 GGLLDKTAIETNNKVPLLGDIPWLGSLFRSKTQTMSKRNLMLFLRPTIIRDPQQYQQASI 660 Query: 606 EKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTF 640 KY + EQQQ+ G+ +++ + L + NT+ Sbjct: 661 SKYNSFNNEQQQQ-RGQGNSVLDNNTLRLSGGNTY 694 Score = 287 bits (735), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 142/289 (49%), Positives = 205/289 (70%), Gaps = 7/289 (2%) Query: 2 KGLNKITCCL-LAALLM--PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSV 58 KG+ K L L LL+ PC AE + A+F DI++F+ V ++L KT++IDP+V Sbjct: 4 KGIKKSWGWLGLTVLLLGSPCGWAAE---FSASFKGTDIQEFINTVSKNLNKTVIIDPTV 60 Query: 59 QGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSR 118 +GTISVRS D + +YYQFFLS+LD+YG+SV+ +DNG LKV+RS + K+S +A++ + Sbjct: 61 RGTISVRSYDMMDEGQYYQFFLSVLDVYGFSVVPMDNGVLKVIRSKDAKSSSIPLANNEQ 120 Query: 119 PGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLI 178 PGVGDELVTR+VPL NV ARDLAPLLRQ+ D G VVHYEPSNVL++TGRA+ I +L+ Sbjct: 121 PGVGDELVTRVVPLNNVAARDLAPLLRQLNDNAGAGTVVHYEPSNVLLMTGRAAVIKRLV 180 Query: 179 EVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS 238 +++ VD G + + L YASAED+A+++N L +++ K+ +P+ + A +VAD RTNS Sbjct: 181 DIVNTVDKTGDREMITVSLNYASAEDVAKLVNDL-NKTDEKNALPSTMLANVVADGRTNS 239 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTG 287 +++SG E +++ LD ++ +G T+V YLKYAKA +L+EVL G Sbjct: 240 VVVSGEENTSPCAVEMIRQLDRKQVAQGGTKVIYLKYAKALDLIEVLAG 288 >UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF18_CELJU Length = 681 Score = 366 bits (940), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 231/654 (35%), Positives = 376/654 (57%), Gaps = 45/654 (6%) Query: 18 PCAGHAENEQ-YGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 P + +A+ EQ + NFN+ DI++ ++ + GKTI+IDP V+G I V ++ + +E Y Sbjct: 32 PTSTNAQGEQTWTVNFNDTDIQEVIKFIAGATGKTIIIDPKVRGPIKVINSKPLTSKEVY 91 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL-VTRIVPLENV 135 + FL+ LD+YG++ + N +++V + + + P I V D+L +T+++PL+N Sbjct: 92 ELFLASLDVYGFTAVESGN-IVRIVANRDARNLP--IPTEKNVNVRDDLYITQVIPLKNT 148 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII 195 A + LR ++ G++ YEPSN LI+T + + ++ E++ ++D IG + +I Sbjct: 149 SAAKILAALRPLVP--QYGHLTTYEPSNALIITDTRANVARMNELVVQLDKIGITQTDVI 206 Query: 196 HLEYASAEDLAEILNQL--ISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 L YA+A ++ +L QL + G + P + IVADKR N+++ISG + +RQR+ Sbjct: 207 PLRYANATEVVNMLTQLEKPDPNRGMTTSPPV----IVADKRINAVVISGDDMSRQRLKF 262 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV-- 311 L+ LD +++ N RV YL+YAKA ++ +VLTG+ + + + GA N Sbjct: 263 LIDDLDRPQTKNANVRVVYLRYAKAEDVAKVLTGMMQSFTQSR------QAEGAAPNTQQ 316 Query: 312 -AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 + AD TNS+++TAD + + +++ LDIRRAQVLVEAII EV D +G LG++W Sbjct: 317 PGVQADPATNSVLLTADVDTMDTMLSIVDSLDIRRAQVLVEAIIAEVSDEDGKELGIEWM 376 Query: 371 NKN----VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW-DMFSAYNGMAAGFF-- 423 ++ GA + G + +A KN + A ++ S +G++ F Sbjct: 377 YRDDKYGFGASANGSRGSIGGIGSAVLAASDKNASQDDKDTALANLASGLSGLSGQMFGF 436 Query: 424 -----NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-- 476 D+ +L + S++K +IL+TPS++T DN A +VG+ VP +GS + G Sbjct: 437 GRLGERTDFLAVLKLMQSSSKTNILSTPSLLTTDNNQAVISVGRQVPFRTGSYSAVGTGG 496 Query: 477 -----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTI 531 + F T+ R+ VG KL+VTP +NEGD+++L+I+QEVSS+ S +S G N R I Sbjct: 497 NSTIGSPFTTINREDVGLKLEVTPHINEGDSIVLDIKQEVSSL-SDVSSEDGIITNKREI 555 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 Q +L GET+VLGGL+ D + +VP+LG IP++GQLFR ++ ++K NL+VFIR Sbjct: 556 QTQILSSDGETIVLGGLITDEVQTGERRVPVLGSIPVLGQLFRSQTSSKSKTNLLVFIRA 615 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAP 645 T++RDD V + EKY R+EQ + + LV ++PVL E + S P Sbjct: 616 TVVRDDKVLTGSTAEKYRLIREEQLNHVRNRG-LLVRKSEIPVLPE--WESRQP 666 >UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pseudomonas RepID=GSPD_PSEAE Length = 658 Score = 358 bits (918), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 227/602 (37%), Positives = 350/602 (58%), Gaps = 33/602 (5%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 AG+ + + N +ADIR+F++ + + G+T ++DP V+G +SV S S E YQ F Sbjct: 45 AGNQQEAHWTINLKDADIREFIDQISEITGETFVVDPRVKGQVSVVSKAQLSLSEVYQLF 104 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 LS++ +G++V+ + ++V +A KT G S P D L TR++ ++ P + Sbjct: 105 LSVMSTHGFTVVAQGDQA-RIVPNAEAKTEAG--GGQSAP---DRLETRVIQVQQSPVSE 158 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY 199 L PL+R ++ G++ +N LI++ R++ I ++ +VI+++D G+ +I+L Y Sbjct: 159 LIPLIRPLVP--QYGHLAAVPSANALIISDRSANIARIEDVIRQLDQKGSHDYSVINLRY 216 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD 259 D AE+LN +S K A+++AD RTN LII GP +AR ++ L +SLD Sbjct: 217 GWVMDAAEVLNNAMSRGQAKGAA----GAQVIADARTNRLIILGPPQARAKLVQLAQSLD 272 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 + NTRV L++ A L E L +SE +K+ G + + G N+ I ADE T Sbjct: 273 TPTARSANTRVIRLRHNDAKTLAETLGQISEGMKNNGGQGGEQTGGGRPSNILIRADEST 332 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA-NK-NVGAQ 377 N+LV+ AD L ++ +LD+ RAQVLVEA IVE+ +GVQWA NK +G Sbjct: 333 NALVLLADPDTVNALEDIVRQLDVPRAQVLVEAAIVEISGDIQDAVGVQWAINKGGMGGT 392 Query: 378 Q--FTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 + F NTGL I Q + K I +G G + +G L+TAL+ Sbjct: 393 KTNFANTGLSIGTLLQSLESNKAPESIP------------DGAIVGIGSSSFGALVTALS 440 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLK 492 +N K+++L+TPS++TLDN+ A VGQ+VP +GS TT+ + N F TVERK +G LK Sbjct: 441 ANTKSNLLSTPSLLTLDNQKAEILVGQNVPFQTGSYTTNSEGSSNPFTTVERKDIGVSLK 500 Query: 493 VTPQVNEGDAVLLEIEQEVSSV--DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 VTP +N+G A+ LEIEQE+S++ ++ + + R+I++ +L + G+ +V+GGL+ Sbjct: 501 VTPHINDGAALRLEIEQEISALLPNAQQRNNTDLITSKRSIKSTILAENGQVIVIGGLIQ 560 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 D + SKVPLLGDIPL+G+LFR T KRNLMVF+RPT++RD +LS +KY+ Sbjct: 561 DDVSQAESKVPLLGDIPLLGRLFRSTKDTHTKRNLMVFLRPTVVRDSAGLAALSGKKYSD 620 Query: 611 YR 612 R Sbjct: 621 IR 622 >UniRef50_Q0VSG7 General (Type II) secretion pathway protein D n=2 Tax=Alcanivorax RepID=Q0VSG7_ALCBS Length = 710 Score = 358 bits (918), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 226/672 (33%), Positives = 366/672 (54%), Gaps = 45/672 (6%) Query: 4 LNKITCCLLAALLMPCAGHAEN----------EQYGANFNNADIRQFVEIVGQHLGKTIL 53 L+KI L + +M + HA+ E + N NADI+ F+ V Q GK + Sbjct: 13 LSKIMLLLALSAVMVTSLHAQTTNQVQASDDGESWTVNIRNADIQAFISQVAQMTGKNFV 72 Query: 54 IDPSVQGT-ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTS--P 110 +DP V+ ++V S + + E Y+ FLS+L ++GY+ +++ + K+V + K S P Sbjct: 73 VDPRVRARDVTVVSTKSLTSNEVYELFLSVLQVHGYAAVSVGD-ITKIVPNTTAKQSNLP 131 Query: 111 GMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGR 170 + SS G+ELVTR++ +E+ P +L P+LR ++ G++ +N LI++ Sbjct: 132 LVEKGSSS---GEELVTRVIAVESTPVEELVPVLRPLVP--QYGHLAAVGSANALIISDH 186 Query: 171 ASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKI 230 I ++ +I +D +E Q++ L++A A D+ ++L L ++ G+ A + Sbjct: 187 LDNIRRMEAIISSLDSAESEDVQVLKLKHAFAGDMVKMLESLTPQTGGRGGKSAEGGVIV 246 Query: 231 VADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE 290 VAD+RTN LII G RQR+ +++SLD EE+ +V L + A ++ E+L + Sbjct: 247 VADERTNRLIIKGDRVTRQRMLQMVRSLDTEETNNSGAKVIRLSHGDAKSMAELLKNFVD 306 Query: 291 KLKDEKGNARKPSSSGAMDN--VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQV 348 + ++S A++N V+I ADE N+LV+ A ++ +++ +VI++LD+RRAQ+ Sbjct: 307 GASVNRAGGDGKTTSVALNNNEVSIQADESLNALVVRAKPAMMKQIQSVISKLDVRRAQI 366 Query: 349 LVEAIIVEVQDGNGLNLGVQWANKN----VGAQQFTNTGLPIFNAAQGVADYKKNGGITS 404 L+EA IVE+ G NLG Q+ + VGA F GL + + Q +A +G Sbjct: 367 LIEAAIVEISGEQGKNLGFQYVGGSNEDGVGAVNFGGNGLSVNSVVQALASDDPSG---- 422 Query: 405 ANPAWDMFSAYNGMAAGFFNGD------WGVLLTALASNNKNDILATPSIVTLDNKLASF 458 S +G+ AG D WG L+ AL++++ ++L+TPSI+TLDN+ AS Sbjct: 423 -------LSLGDGITAGLGETDSDGDLKWGALIQALSTSSDVNLLSTPSILTLDNEEASI 475 Query: 459 NVGQDVPVLSGSQTTSGDNV---FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD 515 VG++VP ++G T +G V F T++R+ VG LKVTP V + LE+EQE S+V Sbjct: 476 IVGENVPFVTGQSTNTGSGVSNPFTTIQREDVGLTLKVTPHVAGLSTIRLELEQESSAVK 535 Query: 516 SSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRY 575 S+ + TR +Q+ VL ET+ LGGL+ D + V KVP LGDIP++G LFR Sbjct: 536 DSAGDAVDIVTTTRKLQSTVLADDAETIALGGLIKDDIRVTVRKVPFLGDIPVLGFLFRS 595 Query: 576 TSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVL 635 TS +R K NLMVF++PTI+ ++D +S++KY Q + D V +P Sbjct: 596 TSKDRVKSNLMVFLKPTILGNNDRLVEMSRDKYMGLTALQFRLNDDGELEQVEKNPIPQS 655 Query: 636 DENTFNSHAPAP 647 ++ F P P Sbjct: 656 LDHIFEGRTPVP 667 >UniRef50_C6C305 General secretion pathway protein D n=1 Tax=Dickeya dadantii Ech703 RepID=C6C305_DICDC Length = 714 Score = 357 bits (916), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 191/333 (57%), Positives = 242/333 (72%), Gaps = 16/333 (4%) Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 V + A +QTNSL+ITA + L VI +LDIRR QVLVEAII EVQD +GLNLG+QWA Sbjct: 369 VIMRAHDQTNSLIITAPPDIMRDLEQVINQLDIRRPQVLVEAIIAEVQDADGLNLGIQWA 428 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 NK G Q+TNTG+PI A GV Y+ +G +TS + ++NG+AAGF++G+W +L Sbjct: 429 NKRAGMTQYTNTGMPISTAIVGVDQYRDDGTLTSNFSS--ALGSFNGIAAGFYHGNWSML 486 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 LTAL+SN+KND+LATPSIVT+DN A+FNVGQ+VPVL+GSQTTS DN+++TVERKTVG K Sbjct: 487 LTALSSNSKNDVLATPSIVTIDNMEATFNVGQEVPVLTGSQTTSADNIYSTVERKTVGIK 546 Query: 491 LKVTPQVNEGDAVLLEIEQE---VSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGG 547 LKV PQ+NEGD+VLL+IEQE V+ SS++S LG TFNTRT+ NAV+V GETVV+GG Sbjct: 547 LKVKPQINEGDSVLLQIEQEVSSVADSSSSTSSDLGATFNTRTVNNAVMVTNGETVVVGG 606 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 LL+ + E SKVPLLGDIP++G LFR S +KRNLM+F+RPTIIRD Y++ S + Sbjct: 607 LLNKSTVETDSKVPLLGDIPVLGNLFRSKSLTVSKRNLMLFLRPTIIRDRQQYQATSINQ 666 Query: 608 YTRYRQEQQQRIDGKSKALVGSEDLPVLDENTF 640 Y + EQ + K VLD NT Sbjct: 667 YKAFDSEQDLQRSNK-----------VLDSNTL 688 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 138/286 (48%), Positives = 209/286 (73%), Gaps = 1/286 (0%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 KG+ K L L+ + ++ + ++ A+F DI++F+ V ++L KT++IDP+V+GT Sbjct: 4 KGIMKRWGWLGLTALLISSTYSWSAEFSASFKGTDIQEFINTVSKNLNKTVIIDPTVRGT 63 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 I+VRS D ++++YYQFFLS+LD+YG+SV+ +DNG LKV+RS + K+S +A+ +PGV Sbjct: 64 ITVRSYDMMNEEQYYQFFLSVLDVYGFSVVPMDNGVLKVIRSKDAKSSSIPVANDEQPGV 123 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 GDELVTR+VPL NV ARDLAPLLRQ+ D G+VVHYEPSNVL++TGRA+ + +L+E++ Sbjct: 124 GDELVTRVVPLNNVAARDLAPLLRQLNDNAGAGSVVHYEPSNVLLMTGRAAVVKRLMEIV 183 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 VD G I L YASA+D+A+++N L +++ K+ +P+ + A +VAD RTNS+++ Sbjct: 184 STVDKTGDRNVVTIPLTYASADDVAKLVNDL-NKTDEKNALPSTMVANVVADSRTNSVVV 242 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTG 287 SG + ARQR+ ++ LD ++ +G T+V YLKYAKA +L+EVL G Sbjct: 243 SGEDNARQRVVEMIHQLDRKQVVQGGTKVIYLKYAKALDLIEVLAG 288 >UniRef50_C7R8G0 General secretion pathway protein D n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8G0_KANKD Length = 708 Score = 354 bits (908), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 239/687 (34%), Positives = 373/687 (54%), Gaps = 60/687 (8%) Query: 1 MKGL-NKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQ 59 MK L N +T L AA L+ + A E+ N +ADIR+ VE V + GKT+++DP V+ Sbjct: 10 MKQLGNNLTMALCAAGLLLSSFSANAERL--NVRDADIREVVETVAKITGKTMIVDPRVK 67 Query: 60 G---TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS 116 G TI N +++ + Y F+S L ++ + I NG +K++ ++ + Sbjct: 68 GLKVTIITAGNVDYTKDQIYNIFVSALQVHKFQAIEA-NGVVKIIPDQQARSEYSPVNVG 126 Query: 117 SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINK 176 + GD +T+++P++NV A+ + +LR ++ S G++ + +N LIL AS + + Sbjct: 127 NLDDYGDRYITQVIPVQNVDAQQIMNVLRPLVSPTS-GHLFAVQGTNTLILHDSASNVRR 185 Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 + E+I R D E+ ++I LE+ASA ++ IL L + S + Q + + VAD+RT Sbjct: 186 ITEIIDRTDKANDEEIEVIPLEHASASEIVRILESL-NRSGRQPQGNEVQEPRYVADERT 244 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE-KLKDE 295 NS+++S ++ R R+ +L+ SLD + GNT+ +LKYAK+ + EVL+G+ E K K+E Sbjct: 245 NSILLSANDRQRVRLRALIGSLDRPLNSMGNTKTVFLKYAKSEQVAEVLSGIGEIKQKEE 304 Query: 296 KGNARKPSSSGAMDNV------AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 + + + +I + E+TN+LV+TA + + +VI LDIRR QV Sbjct: 305 AAASGRGGAGAGGGVATQRSLYSIQSHEETNALVLTAPPDIMREFDSVIRALDIRRKQVH 364 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQ-------QFTNTGLPIFNAAQG-VADYKKNGG 401 VEAIIVE+ D LG+QW G+ FTNTG I A G ++ Sbjct: 365 VEAIIVEISDNKAKELGIQWLFSPEGSNTTPGGVVNFTNTGPGIGQVAAGAISARGTEEE 424 Query: 402 ITSANPAWDMFSAYNGMAAGFFNG-------------------------DWGVLLTALAS 436 + + +P + G NG WG + AL Sbjct: 425 VFTRDPETGEITGTETRRVGGDNGAALAEVLGGMQGLGLGVAKIRPDGFSWGAFIRALEG 484 Query: 437 NNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKV 493 ++ L+ PS+ TLDN A F GQ++P+++GS T GD N F VERK VG LK+ Sbjct: 485 VTDSNTLSRPSVTTLDNVEAIFKSGQEIPIITGS--TLGDNNSNPFQNVERKDVGVMLKL 542 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 TPQ+NEG+ V L+IEQEVSS+ S+N + N R ++ +VLV G VVLGGL+DD Sbjct: 543 TPQINEGNYVRLDIEQEVSSIAGSTNVDV--VTNKREVKTSVLVPDGGMVVLGGLIDDDI 600 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 ++ KVP+LGDIP++G F+ T++ KRNLM+FI PT+++DD R LS KY+ R Sbjct: 601 QQSSQKVPILGDIPVLGHAFKSQRTQKIKRNLMIFIHPTVLKDDAELRELSSAKYSYIRA 660 Query: 614 EQQQRIDGKSKALVGSED---LPVLDE 637 +Q ++ + + +L+ E+ LP DE Sbjct: 661 QQIEQAN-RGISLMPEEETEVLPTYDE 686 >UniRef50_Q0A5Z6 General secretion pathway protein D n=2 Tax=Ectothiorhodospiraceae RepID=Q0A5Z6_ALHEH Length = 673 Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 219/638 (34%), Positives = 351/638 (55%), Gaps = 32/638 (5%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+E NF +AD+R+ V +V Q G ++DP V+G +++ S YQ FLS L Sbjct: 33 EDEGITLNFQDADLREVVALVSQETGVNFIVDPRVRGDVTIVSQTPVDADGLYQVFLSAL 92 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 ++G++ + + R+ + D++R +GD+ VTR++ +++V A +L P+ Sbjct: 93 KIHGFAAVPTPEAVRIIPRAQARQDRIPSDGDTTR-SLGDQAVTRVIRVDHVNAAELVPV 151 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 LR ++ G++ Y P+N LI++ A+ +++L +I RVD + ++I LE+A+A Sbjct: 152 LRPLVPQD--GHLAAYSPANSLIISDTAANVDRLEVLIGRVDRDTEGEIEVIQLEHAAAS 209 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES 263 ++ ++ +L E ++ ++VAD+R NS++I+G + R + +L+ +D E + Sbjct: 210 EVVRMVRELEDEEREGRRL------RVVADERANSVMIAGDRQRRLLVRALIGQIDSEVA 263 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV 323 EG +V YL++A A LV VL G+ L + +G + + I A TN+LV Sbjct: 264 AEGTAQVVYLRFADAEELVPVLEGIGTSLLESRGG-----NDAGGQGLDIRAHSSTNALV 318 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA----NKNVGAQQF 379 + V L +V+ RLDIRRAQVLVEA+I EV LGVQW ++ VG F Sbjct: 319 MNGPADVLRSLRSVLNRLDIRRAQVLVEAVIAEVSQDRVEELGVQWGVLSEDRGVGLINF 378 Query: 380 TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW------GVLLTA 433 A G+AD + G S D+ +G A G GD L+ A Sbjct: 379 GGA----AGAGGGIADVIRAAGAISDGSTADLPQVGDGAAIGV--GDLRGSTQVAALIRA 432 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 L+ ++ ++IL+TPS++T+DN+ A VGQ+VP ++G F++++R+ VG +L++ Sbjct: 433 LSGDSASNILSTPSLMTMDNEEAEIVVGQNVPFITGRAIEDSGQAFSSIQRQDVGVQLRI 492 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 PQ+NEGD + LEIEQEVSSV + R+++ +V+V+ G+ VVLGGL+DD Sbjct: 493 RPQINEGDTLKLEIEQEVSSVSGGIQGAADLVTDLRSVRTSVMVENGQMVVLGGLIDDQL 552 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 + + VPLLG++P +G+LFRY ++ KRNLMVF+RP IIRD + E Y R R Sbjct: 553 RTRSQAVPLLGNLPGLGRLFRYDRSQVEKRNLMVFLRPVIIRDTAAQERATAEPYNRMRA 612 Query: 614 EQQQRIDGKSKALVGSEDLPVLDEN-TFNSHAPAPSSR 650 QQR + L+ + PVL E+ F S PA R Sbjct: 613 -MQQRFRDEGVPLMPDDAAPVLAESEQFMSLPPAYDDR 649 >UniRef50_A1WZM1 General secretion pathway protein D n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZM1_HALHL Length = 670 Score = 341 bits (874), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 223/657 (33%), Positives = 349/657 (53%), Gaps = 45/657 (6%) Query: 9 CCLLAALLMPCAGHAENEQYGA-------NFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 +AALL P A+++ + NF +ADI+ + +V + G+ ++DP V+G Sbjct: 25 ILFIAALLAPMLVVADDDAWAERGDGITLNFEDADIKSVIALVSERTGRNFVVDPRVRGE 84 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 ++V S+ + YQ FLS L ++G++ I D G +++V K + + Sbjct: 85 LTVISSQPVDDDQLYQVFLSALQIHGFAAIPAD-GAIRIVPKNIAKRDQTPVPEPGTAES 143 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 G VT+++P+E+V A +L PLLR ++ + Y +N LI++ A I +L +I Sbjct: 144 GHNFVTQVIPIEHVEASELIPLLRPLI--SDEAELAAYSETNTLIVSETAGNIGRLKRLI 201 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 RVD T +++ LE+ SA ++ E++ + E ++ + AD R+NS+++ Sbjct: 202 DRVDQDTTGVTEVVPLEHGSASEIVEMVEAIEPEKRAGRRL------LLAADDRSNSVLV 255 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 G R + L++ LD E +E V YL+Y+ A ++V +L G++E G AR Sbjct: 256 GGDPARRPSVMELIQRLDAELEDEEGAAVIYLRYSDAESIVPILEGMAE------GMARG 309 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 P V+I E TN+L+I + KL V+ RLD+RRAQVLVEAII EV Sbjct: 310 PEGE---TGVSIHDHEATNALIINGPPDLVAKLRGVVNRLDVRRAQVLVEAIIAEVSAER 366 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 LG+QW GA GL F+AA G + A S +G+ AG Sbjct: 367 SQELGIQW-----GALGDQGVGLVNFDAAGGGSVTNIGRAAAGGTDALGNLSLGSGLTAG 421 Query: 422 FF--NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV- 478 G+ GVLL AL+S + ++IL+TPS++T+DN+ A VGQ+VP ++G + GD Sbjct: 422 AATRGGELGVLLRALSSESDSNILSTPSVMTMDNEEAEIVVGQNVPFVTGREV--GDTRD 479 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 F +++R+ VG +L++ PQ+NEGD++ L+IE+EVS V + T + R+I + +V Sbjct: 480 FQSIQREDVGVQLRIRPQINEGDSLKLDIEKEVSDVQERGEAEDIVT-SMRSITTSAMVD 538 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 GE +VLGGL+D+ ++ Q +VP LG IP +G LFRY S+ K+NLMVF+RP II + D Sbjct: 539 DGEIMVLGGLMDEQAESQTDRVPGLGSIPGLGWLFRYESSAAQKQNLMVFLRPRIIENRD 598 Query: 599 VYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDEN--------TFNSHAPAP 647 R L+ KY R Q + + ED+PVL + F A AP Sbjct: 599 DARELTSPKYNLIRNRQLAS-RARGMRFLDDEDIPVLSQRRAFMELPPEFGDRAGAP 654 >UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gammaproteobacteria RepID=Q31J27_THICR Length = 703 Score = 334 bits (857), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 236/670 (35%), Positives = 353/670 (52%), Gaps = 75/670 (11%) Query: 10 CLLAALLMPCAGHAENEQYGA------NFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 CL+ + GHA+ E NF ADI + +E V + GK +IDP V+G ++ Sbjct: 11 CLMG---LSINGHAQPESQSEEVTLKQNFQQADIEKVIEAVAKLTGKNFIIDPRVKGKVT 67 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP---- 119 + + + ++ Y+ L+IL ++GY I ++ P +A P Sbjct: 68 LIAPEAMPPEDLYETLLAILHVHGYVAIPGKTA---------IQIIPANLARDQVPYENP 118 Query: 120 -GVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLI 178 + VT ++ +E VPA L +LR ++ G++V SN +I+T S I +L Sbjct: 119 SAQQSDWVTEVITIEKVPATKLVAVLRPLV--AREGHLVALSESNRMIVTDSQSNIARLK 176 Query: 179 EVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS 238 +VIKRVDV + ++I L +ASAE++ ++ +++S+S K + D+R+N Sbjct: 177 QVIKRVDVDESSGYEVIKLSHASAEEMMLVIKKVMSKSANKQ-------FNVSFDERSNR 229 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVL----------TGV 288 +I+SG + R+ + +L+ LDV EG +V YL YAKA LV VL + V Sbjct: 230 VILSGDQDTRREMRALIADLDVSVPSEGRVQVIYLHYAKAAELVPVLQKIATNRSLLSSV 289 Query: 289 SEKLKDEKGNARKPSSSGAMDN----------VAITADEQTNSLVITADQSVQEKLATVI 338 S K + + +G N ++I A+E+ N+++I+A V L TVI Sbjct: 290 SSDAKTSEATIPDATGNGVQVNQLDDKTLKSRISIEAEERMNAIIISAPPGVVSVLKTVI 349 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKK 398 +LDIRRAQVL+EAI+VEV + LGV+W GA GL N + + Sbjct: 350 KQLDIRRAQVLIEAILVEVTETKQAELGVEW-----GAAGPNGVGL--INFSGTIPTIIG 402 Query: 399 NGGITSANPAWDMFSAYNGMAAGF--FNGD---WGVLLTALASNNKNDILATPSIVTLDN 453 N G NPA + G+ A F + D WG L+ AL S+++ +IL+TP+++TLDN Sbjct: 403 NAG----NPAAQANAIGTGVNAAFGEVSADGTGWGALIRALNSDSEANILSTPTLLTLDN 458 Query: 454 KLASFNVGQDVPV-----LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIE 508 + A VG++VP S +++ N FNT+ERK VG LKVTPQ+NEGD V LEI Sbjct: 459 EEAEIVVGKEVPFQTGSYTSTGTSSTPTNPFNTIERKNVGLSLKVTPQINEGDEVFLEIN 518 Query: 509 QEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPL 568 QE+S V ++ T + R I+ V+V G +VLGGLL + E KVP LGDIP Sbjct: 519 QEISDVIPKGDAVDVQT-SKRQIKTRVIVGDGNVIVLGGLLTEKETEVEKKVPGLGDIPG 577 Query: 569 VGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVG 628 +G LFR TS ER K NLMVF+RP I+RD+ + S++KY+ R EQ Q + S L G Sbjct: 578 LGALFRSTSNEREKVNLMVFLRPVIVRDNKMGTYYSRKKYSLIRNEQTQLLKKDSGLLEG 637 Query: 629 -SEDLPVLDE 637 +P L++ Sbjct: 638 LRPRMPTLEQ 647 >UniRef50_D0KWK8 General secretion pathway protein D n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWK8_HALNC Length = 725 Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 244/664 (36%), Positives = 361/664 (54%), Gaps = 55/664 (8%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 +++ ++ NF + DI +E V + GK ++DP V+ ++V S S Q+ Y FLS Sbjct: 51 NSDTDKVTLNFRDMDIGALIEAVSKVTGKNFIVDPRVKARVTVISAKPMSPQKLYDVFLS 110 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG---VGDELVTRIVPLENVPAR 138 IL + G++ + +K+V N ++ A PG VGD++VT +V L VPA Sbjct: 111 ILQVNGFAAVPA-GAVIKIVPEINARSD----AQPVNPGSSAVGDQMVTEVVHLRYVPAA 165 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 L +LRQ+M + +V Y SN L++T RA I++L +++ +VD +II L+ Sbjct: 166 PLLTVLRQIMPQQAALSV--YPDSNSLVITDRAGNIDRLKKILAKVDQPAVGDVEIIRLK 223 Query: 199 YASAEDLAEILNQLISESHGK----------------SQMPALLSAKIVADKRTNSLIIS 242 ASA+ + L L S G S +PA AD RTNS+++S Sbjct: 224 RASADSVVSTLKALFGASGGGGAKGAPVPGGGAGGNFSSVPAF-----AADDRTNSVLLS 278 Query: 243 GPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV--SEKLKDEKGNAR 300 G +R ++ +++ +LD+ ++ GNTRV+ LKYA A +LV+VL G+ + A Sbjct: 279 GDAVSRAKMRAIILNLDMPQTNYGNTRVFRLKYANAEDLVDVLKGIVSTNGATSTGATAT 338 Query: 301 KPSSSGAMDN-VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 K +++ +N + I AD+ N+LV+TA S + + +VI +LDIRR QVLVEAII EV + Sbjct: 339 KEATTNPDNNQLEIAADKSLNALVVTASPSRMQTVESVIDQLDIRRKQVLVEAIIAEVSN 398 Query: 360 GNGLNLGVQWANKNVGAQQFT-NTGLPIFNA----AQGVADYKKNGGITSANPAWDMFSA 414 G LG Q+ VG T G+ FN A G + SA + Sbjct: 399 GVTKKLGTQFL---VGGGSGTVPIGISTFNGLLSSVASSAAQAGTGSVGSAIGLGLAGAL 455 Query: 415 YN--GMAAGFFN---GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 + + G + D+ +L++ALA N+ N+IL+TPS++TLDN+ AS VGQ++P+++G Sbjct: 456 GDGGNIGVGRYGQGGADFALLVSALAGNSGNNILSTPSLLTLDNQEASIVVGQNIPIVTG 515 Query: 470 S-----QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGP 524 S TS N F T+ R+ +G KLKVTP ++ V L+IEQEVSS+DS++ S+ G Sbjct: 516 SYAQTGSATSPTNPFQTITREDIGVKLKVTPTISPDGTVRLKIEQEVSSLDSAAQSSAGL 575 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 N R + V V G+ VVLGGL+DD + VP LGDIP++G LFRY S KRN Sbjct: 576 ITNKRNVTTTVQVDDGDVVVLGGLIDDSTNSNQQSVPGLGDIPILGNLFRYRSASTNKRN 635 Query: 585 LMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLD-ENTFNSH 643 LM+FIRP I+ D S+E+Y R RQ QQ D +S LV D VL E F + Sbjct: 636 LMIFIRPLIVGDGGKLSEFSREQYNRIRQSQQDTFDKRS--LVNPSDWSVLSPEQNFQRN 693 Query: 644 APAP 647 P P Sbjct: 694 LPIP 697 >UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBE1_9GAMM Length = 630 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 223/651 (34%), Positives = 358/651 (54%), Gaps = 49/651 (7%) Query: 7 ITCCLLAALLMPCAGHAEN-EQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVR 65 I C L+AA L+ + A + E+ N +ADIR ++ V + GK I++ V+G ++V Sbjct: 12 IQCLLIAATLLSLSQLAYSAEKLTMNMRDADIRALIQWVADNTGKNIVVHRDVKGKVTVL 71 Query: 66 SNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL 125 S + + E YQ FLS+L ++ Y+VI V RS + A S+ ++ Sbjct: 72 SPEPLTVDEAYQVFLSVLQVHEYAVIETPEALKIVPRSIAASGALPYAASSTTA----DM 127 Query: 126 VTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD 185 V I+ +EN A +A LR +M +V + Y +N L+L AS I+ E+I+++D Sbjct: 128 VVSIIKIENTSALQMAEALRPLMSKDAV--IKPYLATNALVLADHASNISSAQELIQQLD 185 Query: 186 VIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPE 245 + +I L++A AE + + L+ L+ SQ + L+ I ++R+NS++++G Sbjct: 186 KTSDSEIDVIVLQHADAESILQSLSTLLPSG---SQQASALNITISINERSNSILLAGDP 242 Query: 246 KARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS 305 R++ +L+K LD +GNT V YL Y A+ +V +L +++ ++ + + Sbjct: 243 AKRKQFRNLIKKLDKPLDGQGNTDVVYLHYVDASEIVPILENLAKSIQSNQKDTDS---- 298 Query: 306 GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 N++I A + N+LVI A S+ + ++I++LDIRRAQV+VEAI+VEV+ ++ Sbjct: 299 ----NISIEASKSANALVINAPPSILTTMKSIISQLDIRRAQVMVEAILVEVRGELASDV 354 Query: 366 GVQWA----NKNVGAQQFTNT--GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMA 419 GV W N VGA NT LP+ NA +G SA P FSA G Sbjct: 355 GVTWITDPDNSIVGA---VNTLGNLPLANA-------PSDG---SALP----FSAGRGFT 397 Query: 420 AGFFNG-DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG--- 475 G+FNG D L AL++ +IL+TP+IV +DN+ AS VGQ+VP ++G T+S Sbjct: 398 FGYFNGGDLQAALRALSATQNANILSTPTIVAIDNEEASLLVGQNVPFITGQATSSASST 457 Query: 476 DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAV 535 ++ F T+ER+ +GT L VTP++N+GD++ LEI Q+ ++ S + N R I Sbjct: 458 NDPFTTIERQDIGTSLVVTPRINQGDSITLEIHQKTETIAPSIDIASDIVTNKREIITKA 517 Query: 536 LVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 L++ + +V+GGL++D E + KVPLLGDIP +G LF T K NLMVFI PTI++ Sbjct: 518 LIRDDQVLVIGGLINDEETEIIEKVPLLGDIPYLGSLFSSKGTSHTKTNLMVFIHPTILK 577 Query: 596 DDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPA 646 DD+ L++ +Y + QQQ D + K + +D VL + F++ P+ Sbjct: 578 DDEQIARLTQTRYQFMQNLQQQVKDNEWK--IDPDDSAVLKD--FSTFTPS 624 >UniRef50_Q1N1M8 Type II secretory pathway, component PulD n=1 Tax=Bermanella marisrubri RepID=Q1N1M8_9GAMM Length = 640 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 219/624 (35%), Positives = 352/624 (56%), Gaps = 44/624 (7%) Query: 6 KITCCLLAALL---MPC-AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 KI L ALL MP A A++E + N +ADI+ F+ V G + +IDP V+G Sbjct: 13 KIRTYLAIALLLLSMPFQALAADDETWKVNLKDADIKAFITQVANITGYSFVIDPRVKGK 72 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 +++ S+ +Q E Y+ F S+L ++G+S I + +K+V+ + K GM + P Sbjct: 73 VTIVSDTPMTQNEVYEMFQSVLAVHGFSAIPAGH-IIKIVQQNDTKQEGGMPTTVNAPQ- 130 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 ++++T+++ +++ PA DL P+LR M+ G++ + +N LI+T AS + +L ++I Sbjct: 131 SEQMITQVIQIKDTPALDLVPILRPMV--AKYGHLAGVKSANALIVTDHASNVRRLEKII 188 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQL----ISESHGKSQMPALLSAKI--VADKR 235 +R+D G + +++ LE A D+ +IL L +SE GK++ + ++ +I VAD+R Sbjct: 189 QRLDGSGVSELEVVQLEEAWVGDIVDILTNLDPDKVSEG-GKAREASGVAGRIRVVADER 247 Query: 236 TNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE 295 N LII G + AR+R+ L+ +LD G V L++A + L E+L + +KD+ Sbjct: 248 ANRLIIQGEQSARERVKELIATLDRPSKFSGKASVIRLQHADSEELAELLKNLMGDVKDD 307 Query: 296 KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 KG ++ S V+I AD N+LV+ A+ SV ++ ++ LD+RRAQVL+EA IV Sbjct: 308 KGKSQAGGS------VSIHADTGLNALVVRAEPSVMSEIKEIVTELDVRRAQVLIEAAIV 361 Query: 356 EVQDGNGLNLGVQWA--NKNVG-----AQQFTNTGLPIFNAAQGVADYKKNGGITSANPA 408 EV +GVQ A ++ G A F N G I G+A + PA Sbjct: 362 EVTGQVDDRVGVQTAALDQETGETPLVATDFANAGTSISQLITGIA---------TGQPA 412 Query: 409 WDMFSAYNGMAAGFFNGD--WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 G+ NGD + L+ AL S + ++L+TPSI+T+DN A VGQ+VP Sbjct: 413 ISSGLTLGGVGQ---NGDTEFAFLVQALESVSNANLLSTPSIMTMDNHEAEIIVGQNVPF 469 Query: 467 LSGSQTTSGDNV-FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT 525 ++GS +++ ++ F T++R+ +GT LKVTP V +G V L +EQ SV ++ Sbjct: 470 VTGSTSSTSNSNPFTTIKREDIGTTLKVTPHVQDGKFVRLSVEQSTESVAPTAVEGQADL 529 Query: 526 F-NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 N R+IQ +L + GE V+LGGL+ D +E SKVP LGDIP++G LFR TS R K+N Sbjct: 530 ITNKRSIQTQILAENGEIVMLGGLIRDAVQESESKVPFLGDIPIIGWLFRSTSESRVKQN 589 Query: 585 LMVFIRPTIIRDDDVYRSLSKEKY 608 L+VF++PT++ D + + + KY Sbjct: 590 LIVFLKPTVVLDKADNKKILRRKY 613 >UniRef50_A4BES0 Type II secretory pathway, component PulD n=1 Tax=Reinekea blandensis MED297 RepID=A4BES0_9GAMM Length = 653 Score = 324 bits (831), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 198/619 (31%), Positives = 347/619 (56%), Gaps = 40/619 (6%) Query: 1 MKGLNK---ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPS 57 M G+ + + CCLL L + A+++ Y N ADI + +++V + G+T +IDP Sbjct: 3 MSGMFRNVILACCLL---LTTVSVFADDQTYTLNMQEADITEVIDLVAKVTGRTFIIDPR 59 Query: 58 VQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSS 117 V+G ++V S+ ++ + Y+ FL+ L++YG+S + + K++ +++K S G+ ++ Sbjct: 60 VRGKVTVISDKEMTKSQIYETFLATLEVYGFSAVQAGD-VTKIIGQSDIK-SAGIEVETQ 117 Query: 118 RPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKL 177 VG+E++TR+ P++N A +L P+LR M+ + G++ +NVLI+ RA+ I++L Sbjct: 118 GGRVGEEIITRVFPIQNASAMELVPILRPMV--ANYGHLAGVPSANVLIVADRATNIDRL 175 Query: 178 IEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQL----ISESHGKSQMPALLSAKIVAD 233 E++ +D G+E+ ++++L++A + +L ++ ++ + ++ + + +V D Sbjct: 176 SEIVYLLDKAGSEEIEVVNLQHAWVGAMITLLERISPTAVAAGNQGARSGSNRTVTLVGD 235 Query: 234 KRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK 293 +R+N +I+ G +ARQ+I L++ LD E + +V +L A A + E+L G++ + Sbjct: 236 ERSNRIIVKGETEARQQIIELIQKLDTPSQENASYKVIFLNNADAVKMAEILKGIASTSQ 295 Query: 294 DEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 G PS +++ ADE+ N+L++ A+ S ++L ++I++LDI R QVL+EA Sbjct: 296 GASGQNEPPSQP-----ISVLADEEQNALIVRAEPSDMKELESIISQLDIPREQVLIEAA 350 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFN-----AAQGVADYKKNGGITSANPA 408 IVEV + LGVQWA + G+P + A V + ++ G + Sbjct: 351 IVEVTGNDTDTLGVQWATN----PEVVQDGVPFLSVSSEVAGASVGNLAQSVGQGISQAG 406 Query: 409 WDMFSAYNGMAAGFFNG---------DWGVLLTALASNNKNDILATPSIVTLDNKLASFN 459 A + AG F G D+GV + AL S + + L+TPSI+TLDN A Sbjct: 407 GSPLGALTSVPAGTFMGLADPFGNRVDFGVAIQALESASNTNFLSTPSILTLDNSEAVIT 466 Query: 460 VGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS-S 518 VG VP +G + DN F T+ER+ VGT L V P + + + LE++Q V SVD + S Sbjct: 467 VGNSVPFKTGG-SGDEDNPF-TIERQDVGTTLTVIPHIQQNGTIRLEVDQIVESVDETVS 524 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 R + VLV +GET+VLGGL+ D E S+VP+LG IP++G LF+ ST Sbjct: 525 YDASDVVTKKRQVTTQVLVNSGETIVLGGLIQDQVSELESRVPVLGYIPIIGHLFKSKST 584 Query: 579 ERAKRNLMVFIRPTIIRDD 597 + K NL++ ++P++I D+ Sbjct: 585 LKTKTNLLIILKPSVIEDN 603 >UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax=Alteromonadales RepID=Q21EP4_SACD2 Length = 666 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 231/652 (35%), Positives = 364/652 (55%), Gaps = 28/652 (4%) Query: 3 GLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTI 62 GL IT A+ A Y NF + DI + ++ V GKTI+IDP V+G I Sbjct: 9 GLATITIIFSCAVQAQPAARGSQPSYTVNFKDTDIHEVIKFVADATGKTIVIDPRVKGRI 68 Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG-- 120 V S T ++ E ++ FL+IL+++ ++ + + + ++++ + ++SP + D S G Sbjct: 69 KVISQTTVNKDELFELFLTILEVHDFTAVQVGD-VVRILPLKDARSSPVPVQDESDVGNR 127 Query: 121 -VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 + VT ++ L+N+ A + P+LR ++ S ++ Y SNV++++ A I +L + Sbjct: 128 ASTNGYVTEVIQLKNIEAAKVLPVLRPLVPQHS--HLSSYTESNVIVVSDTAPNIARLRD 185 Query: 180 VIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 VI+R+D +++ L+YA AEDL L +L +S P + +IVADKR NS+ Sbjct: 186 VIERIDTAALPTTEVVPLKYADAEDLVATLTKL-DRGEKQSSTP-VNQLQIVADKRNNSV 243 Query: 240 IISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA 299 ++SG + R+R L++ LD + GN RV YL YA A ++ L+ V + ++ + Sbjct: 244 LLSGEDIQRKRAKDLIRKLDRPPVQMGNVRVVYLNYANAKDVAATLSKVVQNMQQMQPGG 303 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 G D + ADE TN+L++T + L T++ RLDI+RAQVLVEAIIV++ Sbjct: 304 ---KDKGGKDGATVEADEDTNALLLTGSGDMLNSLLTIVERLDIKRAQVLVEAIIVDINV 360 Query: 360 GNGLNLGVQW--ANKNVGAQQFTNTGLPIFNAAQG-VADYKKNGGITSANPAWDMFSAYN 416 LGVQW +N+N G ++ G + + G +A GG + + Sbjct: 361 DANKELGVQWMFSNENNGTFGGSSQG----DGSLGSLATGTLGGGTDALTNLASGIAGNT 416 Query: 417 GMAAGFFNGDWG----VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT 472 G G + G LL+AL +++ +IL+TPS+VT+DN+ AS +VGQ VP +GS + Sbjct: 417 GQLLGVAGNNGGENFIALLSALQTSSDANILSTPSLVTMDNQEASISVGQSVPFRTGSYS 476 Query: 473 TSGD-----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFN 527 T+G N F T++R+ VG L VTP VNEG+ +LL+I QEVSS+ SS + N Sbjct: 477 TTGTTGSVGNPFTTIQREDVGITLTVTPHVNEGNKILLDISQEVSSISSSVAGSADLITN 536 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 I+ +L G+ V+LGGL+ + ++ ++VPLLG IPL+G LF+Y ST+ K+NLMV Sbjct: 537 QSKIETQLLANDGQIVILGGLIQEDVQDGDTRVPLLGSIPLLGHLFKYQSTKFLKKNLMV 596 Query: 588 FIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENT 639 FIR I+ DD+ + EKY +Y ++QQ R K L+ + LPVL E T Sbjct: 597 FIRVKIVTDDEAMYGATAEKY-QYIRDQQMRQHDKGLNLMSRKILPVLPELT 647 >UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 Tax=Acinetobacter RepID=B2I1Y0_ACIBC Length = 758 Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 227/653 (34%), Positives = 342/653 (52%), Gaps = 71/653 (10%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 + A + + N +AD+ F+ V GK +DP V+G ++V SN ++ E Y Sbjct: 23 VSSSAYAQTWKINLRDADLTAFINEVADITGKNFAVDPRVRGNVTVISNKPLNKDEVYDL 82 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 FL +L++ G I N +K+V +NVK S G+ DS GD++VTR++ LEN Sbjct: 83 FLGVLNVNGVVAIPSGN-TIKLVPDSNVKNS-GIPYDSRNRVRGDQIVTRVIWLENTNPN 140 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 DL P LR +M ++ +N LI++ RA+ I +L +I+ +D G + I L+ Sbjct: 141 DLIPALRPLMP--QFAHMAAIAGTNALIVSDRAANIYQLENIIRNLDGTGQNDIEAITLQ 198 Query: 199 YASAEDLAEILNQLISESH-GKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS 257 + AE EI+ QL + S G S+ + +I+AD RTN ++I G + R+RI +++ Sbjct: 199 SSQAE---EIITQLEAMSATGASKDFSGARIRIIADNRTNRILIKGDPQTRKRIRHMIEM 255 Query: 258 LDVEESEE-GNTRVYYLKYAKATNLVEVLTGV-----------------------SEKLK 293 LDV ++ G +V+ LKYA A NL E+L G+ S Sbjct: 256 LDVPSADRLGGLKVFRLKYASAKNLSEILQGLVTGQAVSSSNNSNNSSNSSNPINSLIGN 315 Query: 294 DEKGNARKPSSSGA-------------------------MDNVAITADEQTNSLVITADQ 328 ++ + S+GA + V+I AD NSLV+ AD Sbjct: 316 NQNSGSNTSGSNGASISTPAINLNGNSNSSNQNNITSFNQNGVSIIADNAQNSLVVKADP 375 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA----NKNVGAQQFTNTGL 384 + ++ + I +LD+RR QVL+EA I+EV + LG+QWA + +G F+N G Sbjct: 376 QLMREIESAIQQLDVRRQQVLIEAAIIEVSGDDADQLGIQWALGDLSSGIGLLSFSNVGA 435 Query: 385 PIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-----WGVLLTALASNNK 439 + + A G Y G +A+ + + NG G N D +G L+ AL +N K Sbjct: 436 SLSSIAAG---YLSGGSAGAASAIANGANKGNGATLGLGNFDNSRKAYGALIQALKTNTK 492 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT--SGDNVFNTVERKTVGTKLKVTPQV 497 +++L+TPSIVT+DN+ A VGQ+VP ++GS TT +G N + TVERK VG LKV P + Sbjct: 493 SNLLSTPSIVTMDNEEAYIVVGQNVPFVTGSVTTNSTGINPYTTVERKDVGVTLKVVPHI 552 Query: 498 NEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQV 557 EG V LE+EQEVS+V S + R I+ AVL + G+TVVLGGL+ D + Sbjct: 553 GEGGTVRLEVEQEVSAVQDSRGQAADLVTSKRAIKTAVLAEHGQTVVLGGLVSDDTSLSR 612 Query: 558 SKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 +P L IP VG+LFR + KRNL+VFI PTI+ D + R LS+++Y + Sbjct: 613 QGIPGLSSIPYVGRLFRSDNRSNVKRNLLVFIHPTIVGDANDVRRLSQQRYNQ 665 >UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P193_AZOSE Length = 719 Score = 309 bits (792), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 230/690 (33%), Positives = 337/690 (48%), Gaps = 91/690 (13%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 A+++ NF NA+I ++ +G+ GK LIDP V+GT+++ +N S+ YQ LS Sbjct: 26 AQDDTVSLNFANAEIDAVIKAIGKISGKNFLIDPRVKGTLNIVTNTPVSRDLSYQILLSA 85 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L L GY+ + G K+V A+ K + G GD LVT++ + N A + Sbjct: 86 LRLQGYTAVE-GPGVTKIVPEADAKLHGVPVGKEVLRGRGDSLVTQVFAMRNESATQMLA 144 Query: 143 LLRQMMDAGSVGNVVHYEPSN-VLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 ++R ++ S N V PSN VL++T A + ++ +I VDV + ++ L +A+ Sbjct: 145 VVRPLV---SPNNTVTAFPSNNVLVVTDYADNVARIARIIDSVDVPQGDVH-VLELRHAA 200 Query: 202 AEDLAEILNQLISESHGKSQMPALLSA----KIVADKRTNSLIISGPEKAR-QRITSLLK 256 A DLA LN+L+++ G A ++V D RTNSL++ +R + L+ Sbjct: 201 AVDLAATLNRLMNDGTGNGSAANTADASQRVQVVPDARTNSLLVRTENPSRISALRQLVA 260 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGV---------------------------- 288 SLD GN V YLK A+AT + + L G Sbjct: 261 SLD-RPGAGGNIHVVYLKNAEATKVAQTLNGALAGDGSAPSATDSIASPSPLGASTPDRM 319 Query: 289 ----------SEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVI 338 + + E GNA S G M I AD N+L+I A +++ L VI Sbjct: 320 TTQGAGLTPATYRPSPESGNA---SDRGGM----IQADPVNNALIIVAPEAIYRNLRHVI 372 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV----------GAQQFTNTGLPIFN 388 LD RRAQV +EA+I E+ G+QW + N G F G I Sbjct: 373 DLLDRRRAQVYIEALIAEISTERAAEFGIQWQSANTPGAGSSSTFFGGTNFGGAGQNIIG 432 Query: 389 AAQGVADYKKN-----GGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 AAQ + K GG T P NG FN +L L ++++ +IL Sbjct: 433 AAQNIGSVGKGMNFLLGGGTVKVP-------INGQMVEVFN--LSLLARFLETDSRTNIL 483 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-----NVFNTVERKTVGTKLKVTPQVN 498 +TPS+VTLDN+ A VG+++P ++G T +G N F T+ER+ VG L+V PQ++ Sbjct: 484 STPSLVTLDNEGAKIVVGRNLPFITGQYTNTGGGTTPANPFQTIERRDVGLTLEVRPQIS 543 Query: 499 EGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS 558 EG A+ L+I QE SSV + + + GPT N R+IQ+ VLV G + LGGL++D Sbjct: 544 EGGAIRLDIYQEASSVVPTLDDSAGPTTNKRSIQSTVLVDDGAIIALGGLVEDDYSSGEE 603 Query: 559 KVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQR 618 KVPLLGDIP G LFRY + R K NL+VF+RP I+RD D Y +++ +Y Y QQ+ Sbjct: 604 KVPLLGDIPFAGSLFRYDTRRRTKTNLVVFLRPVILRDRDSYSTITNARYD-YIIGQQRN 662 Query: 619 IDGKSKALVGSEDLPVLDENTFNSHAPAPS 648 + + L G P L PAP+ Sbjct: 663 VAPPNALLHGERRPPELPA----PGTPAPA 688 >UniRef50_A0YBF4 Type II and III secretion system protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBF4_9GAMM Length = 617 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 202/599 (33%), Positives = 344/599 (57%), Gaps = 41/599 (6%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 N +ADI ++ + + K I++DP V+ +++ +N + + ++ FL++LD+YGY+V Sbjct: 33 NMRDADIGSVIQWIAEQTNKKIVVDPRVRAKVTILANKGMTANQAFEVFLAMLDVYGYAV 92 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA 150 T G L++ + K+SP + ++ G E + + ENV A L +L+ ++ Sbjct: 93 -TETGGILRIFPAVQAKSSPKQLVENFSALGGGEQILYVFKAENVSANRLLEVLKPLL-- 149 Query: 151 GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILN 210 S G + Y SN LI+ A + +L+ +++++D G+ ++I+L +A AE+++ ++ Sbjct: 150 PSSGYIAAYPQSNSLIIADEAENVKRLVALVRKIDASGSIDIEVINLLHADAENVSGLVL 209 Query: 211 QLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRV 270 L+S++ G++ I D R+NSL++SG +R+ L+K LD S+ GNTRV Sbjct: 210 SLLSDTTGET-------FSIAPDIRSNSLLMSGDAATTRRVRQLVKQLDQPISDNGNTRV 262 Query: 271 YYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSV 330 YL Y +A ++ +L G+ +++ NA G +++I A E +N+LV+TA S+ Sbjct: 263 VYLHYLEAKEVLPILKGMGAAMQENNRNA------GDSSDISIEASESSNALVMTAPPSM 316 Query: 331 QEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW---ANKNVGAQQFTNTGLPIF 387 + ++ VI ++DIRRA +LVEAIIVEV +GV+W + N GA+ TN GL Sbjct: 317 LDVMSRVIEQIDIRRASILVEAIIVEVSKDFSQTIGVEWNTSLSANDGAEALTNFGL--- 373 Query: 388 NAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF-NGDWGVLLTALASNNKNDILATP 446 + ++G ++ + A G+ GF+ NG VL A+A+ N +IL++P Sbjct: 374 ------RNIDESGAVS-------LLGA--GLNLGFYRNGSLRVLAQAIANENDANILSSP 418 Query: 447 SIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVTPQVNEGDAV 503 I+T+DN+ A VG +VP ++G T S + F T+ER +G LK+TPQ+NEGD++ Sbjct: 419 RIMTMDNEEAEILVGSNVPFITGQSTGSSSSTGDPFTTIERHDIGLTLKITPQINEGDSI 478 Query: 504 LLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 L+I QEV ++ ++ N R+I+ V+V+ +VLGGL+ D ++E VSKVP L Sbjct: 479 TLDILQEVETISEATTVANDIVTNKRSIKTKVIVEDDAILVLGGLVSDDTQELVSKVPFL 538 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGK 622 GD+PL+G LFR T+ K+NLMVFI P I+ D + ++S++ Y + Q++ GK Sbjct: 539 GDLPLLGGLFRTTTDTVVKKNLMVFIHPVIVDSDQISDNVSRKNYDLMKSLQEKYNTGK 597 >UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDL7_ACIJO Length = 785 Score = 307 bits (786), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 218/655 (33%), Positives = 343/655 (52%), Gaps = 65/655 (9%) Query: 9 CCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSND 68 + A LL + + + + N +AD+ F+ V GK +DP V+G ++V SN Sbjct: 12 LTIAAPLLAMVSTASYAQTWKINLRDADLTAFINEVADITGKNFAVDPRVRGNVTVISNK 71 Query: 69 TFSQQEYYQFFLSILDLYGYSVITLDNG-FLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 ++QE Y FL +L++ G V+ + +G +K+V +NVK+S G+ D GD++VT Sbjct: 72 ALNKQEVYDLFLGVLNVNG--VVAIPSGRTIKIVPDSNVKSS-GIPYDVRHRATGDQVVT 128 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 R++ LEN A DL P LR +M ++ +N LI++ RAS I +L +I+ +D Sbjct: 129 RVIWLENTNANDLIPALRPLMP--QFAHLSAVNGTNALIVSDRASNIYQLETIIRNLDGT 186 Query: 188 GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSA--KIVADKRTNSLIISGPE 245 G + + L+ + AE++ +L + G + L + +I+AD RTN +I+ G Sbjct: 187 GQNDIEAVSLQSSQAEEMIGLLESM----SGTGSIKDLKGSRIRIIADNRTNRIILKGDT 242 Query: 246 KARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGV---------------- 288 R+RI +++ LDV +E G +V+ LKYA A +L E+L G+ Sbjct: 243 ATRKRIRQMIEMLDVPAAERLGGLKVFRLKYASAKSLSEILQGLVSGQAVNSSQSNDSNN 302 Query: 289 -----------------------SEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVIT 325 S L + + +S + V+I AD N+LV+ Sbjct: 303 NSNSSYNQSNSASEGSSSQISTPSINLNSQSNRNQNNITSFNSNGVSIIADSSQNALVVK 362 Query: 326 ADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA----NKNVGAQQFTN 381 AD + ++ + I +LD RR QVL+EA I+EV+ + LGVQWA + VG F N Sbjct: 363 ADPQLMREIESAIQQLDTRRQQVLIEATILEVEGNDADQLGVQWAMGDLSSGVGIINFDN 422 Query: 382 TGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD---WGVLLTALASNN 438 G + + A A+Y GG +A+ S G +G +G ++ AL SN Sbjct: 423 IGSSLKSIA---ANYLTGGGAGAASAIGAGGSLILGDYKEGSDGSRQLYGAMIQALKSNT 479 Query: 439 KNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVTP 495 K+++L+TPSIVT+DN+ A VG++VP ++GS +T+ N + T+ERK VG LKV P Sbjct: 480 KSNLLSTPSIVTMDNEEAYIVVGENVPFVTGSVSTTSSGTANPYTTIERKDVGVTLKVVP 539 Query: 496 QVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 + EG + LEIEQEVS V ++ + R I+ +VL + G T+VLGGL+ D + Sbjct: 540 HIGEGGTIRLEIEQEVSDVKANKGQAQDLVTSKRAIKTSVLAEHGNTIVLGGLISDNTSY 599 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 +P LG IP +G+LFR KRNL+VFI PTI+ D + R LS+++Y++ Sbjct: 600 SRQSIPGLGAIPGLGRLFRSDGKSDQKRNLLVFIHPTIVGDGESARRLSQQRYSQ 654 >UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P591_9PROT Length = 690 Score = 301 bits (772), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 224/625 (35%), Positives = 331/625 (52%), Gaps = 44/625 (7%) Query: 18 PC-AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 PC A E+E NF NADI++ + + Q K L+DP V+GTI++ S S Y Sbjct: 22 PCHAEKKEDELVTLNFVNADIQEVIRAISQISKKNFLVDPRVKGTINIVSATPVSPALGY 81 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 LS L L GY+ + NG +++ A K DS G GD+LVT + L+ Sbjct: 82 DILLSALRLQGYAAVE-SNGVTQIIPEAEAKQH----IDSLAQGRGDKLVTHVFVLKYES 136 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 A L ++R M+ SV VV Y SN L++T AS++ ++ ++I +D + +I Sbjct: 137 ASQLVNVVRPMISPNSV--VVAYPASNALVVTDYASSVRRIDKLIDSIDQPSADAPIVIP 194 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIV--ADKRTNSLIISGPEKAR-QRITS 253 +++ASA DLA I+N+L+ E+ SQ + + V AD RTN L++ R R+ Sbjct: 195 VKHASAVDLANIINRLMPEA-AASQSGGDDNQRFVLLADSRTNGLLLRSGNPGRIARVKE 253 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA- 312 L+ LD + GN V LK A AT L + L V L E PS+ VA Sbjct: 254 LVTKLDSAANTPGNIHVVQLKNADATKLAQTLRSV---LSGETAPPAAPSTVPQSAGVAT 310 Query: 313 -----ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 I AD +N+L++TA + + L +VI +LD+RR Q+ VEA+IVEV GV Sbjct: 311 SSTGMIQADPSSNALIVTASEPIYNNLRSVIDKLDVRRPQIFVEALIVEVTADKAAEFGV 370 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG-- 425 QW N VGA + +G I + N I +AN ++ + G+ G NG Sbjct: 371 QWQNL-VGASK---SGAHIIGGTNFGSVASGNNIIDAAN---NLSTVNQGLNIGIVNGTT 423 Query: 426 ---------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 + G+L AL ++ +IL+ P+++TLDN+ A VGQ+VP ++G +G Sbjct: 424 TIPGVGTVLNLGMLARALETDTNANILSEPNLMTLDNEEAKIVVGQNVPFITGQYAQTGS 483 Query: 477 NV----FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTI 531 F T+ERK VG LK+ PQ+ +G V L+I QEVSSV SS+S+ G N R+I Sbjct: 484 ATTATPFQTIERKDVGLTLKIKPQIMQGGTVKLQIYQEVSSVLPSSSSSTSGLITNKRSI 543 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 ++ +LV + VVLGGL+ D + SK PLLGDIP++G LFRY + + K NLMVFIRP Sbjct: 544 ESNILVDDNQIVVLGGLIQDSVNDVQSKTPLLGDIPILGSLFRYDTRQHTKTNLMVFIRP 603 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQ 616 I+ + Y+ L+ Y + ++++ Sbjct: 604 YIMYQQNSYQQLTDNFYEQMNKKRE 628 >UniRef50_B1JDL3 General secretion pathway protein D n=6 Tax=Pseudomonas RepID=B1JDL3_PSEPW Length = 650 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 210/620 (33%), Positives = 349/620 (56%), Gaps = 52/620 (8%) Query: 28 YGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYG 87 Y NF + ++ +F++ V + G T ++DP V+G ++VR+ D Y FL+ L G Sbjct: 34 YEVNFVDTELGEFIDSVSRITGTTFIVDPRVKGKVTVRTVDRHDADAIYDIFLAQLRAQG 93 Query: 88 YSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG-DELVTRIVPLENVPARDLAPLLRQ 146 Y+ + L NG +K+V + P + + + G G D + TR+ + N + + +L+ Sbjct: 94 YAAVDLPNGSVKIVPDQAARLEPVPVEAAGKHGEGSDGVATRVFNVRNAASEQMLGILKP 153 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLA 206 ++D VG + Y +N+L++T S + ++ +++++D + E +++ L +ASA D A Sbjct: 154 LIDP-RVGVITPYPAANLLVVTDWRSNLERIDSLLRQLDQVSDEPLKVMPLRHASAADTA 212 Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD--VEESE 264 ++L +L++ G S ++VAD R+N+L++ G + R+ +LL LD E Sbjct: 213 QLLTRLLAREQGAD------STQVVADPRSNALLVRG---STDRVRALLGQLDQPSENRH 263 Query: 265 EGNTRVYYLKYAKATNLVEVLTGVSEK--LKDE---KGNAR-KPSSSGAMDN-VAITADE 317 NT+V YL++A A +V+VL G+S++ + E +G A+ KP + A D+ + + +E Sbjct: 264 SSNTQVIYLRHANAGEVVKVLRGLSQEGGVPSEGAGEGEAKDKPVMAAASDSGIRLEYEE 323 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW--ANKNVG 375 TN++V+ S +++ +LDIRRAQV+VEAII EV D LGVQW A++ G Sbjct: 324 GTNAVVMVGPDSELAAYRSIVEQLDIRRAQVVVEAIIAEVSDSRAQELGVQWLFADEKFG 383 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNG---------GITSANPAW-DMFSAYNGMAAGF--F 423 A G+ ++ NG + N A D+ SA G+ AG F Sbjct: 384 A---------------GIVNFGSNGVNIANIAGAAASGDNEALGDLLSATTGVTAGIGHF 428 Query: 424 NG--DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT 481 G ++ +L+ AL + ++L+TP+++TLDN AS VGQ+VP ++GS T + N + T Sbjct: 429 GGGFNFAMLINALKGKSGFNLLSTPTLLTLDNAEASILVGQEVPFVTGSVTQNNANPYQT 488 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGE 541 +ERK VG KL++ PQ+N ++V L+I QEVSS+ SS ++ T N R I+ V+V+ Sbjct: 489 IERKEVGVKLRIKPQINIDNSVRLDIVQEVSSIADSSAASDVIT-NKREIKTKVMVEDNG 547 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 V+LGGL+ D +VP LGDIP +G+LFR +++ K+NLMVFIRP I+RD Sbjct: 548 LVILGGLISDELSTSDQRVPFLGDIPGLGRLFRSEASKNTKQNLMVFIRPRILRDGPSLA 607 Query: 602 SLSKEKYTRYRQEQQQRIDG 621 LS++KY +Q ++ G Sbjct: 608 GLSEDKYRTLQQTTPLKLPG 627 >UniRef50_A1U289 General secretion pathway protein D n=4 Tax=Gammaproteobacteria RepID=A1U289_MARAV Length = 649 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 202/599 (33%), Positives = 331/599 (55%), Gaps = 20/599 (3%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + E + N +ADIR FV V G + ++DP V+G ++V S+ ++ E Y FL++L Sbjct: 27 QEETWRLNLKDADIRAFVTQVADITGYSFVVDPRVKGKVTVLSSAPMNKDEIYDLFLAVL 86 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 +++G++ I + +K+V+ + K S + + ++L+TR++ ++N A +L P+ Sbjct: 87 NVHGFTAIPGEE-VVKIVQQVDAKQSAENLNRFPQTP-SEQLITRVIQIDNANALELVPI 144 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 LR ++ G++ +N LI++ AS I ++ ++++ +D + ++I L+ A Sbjct: 145 LRPLV--AKYGHLAGVAAANALIVSDHASNIARIEQIVRELDSPSKYEVEVIQLQEAWVG 202 Query: 204 DLAEILNQLISESHGKSQMP-ALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE 262 D+ +L +L E G++ A + AD+R+N LI+ G E R ++ L+ LD Sbjct: 203 DMVTLLQELAPEELGRAGGENAARKYSVTADERSNRLILRGDETFRDKMRGLILQLDQPS 262 Query: 263 SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN--VAITADEQTN 320 + G T+V L++A A L E+L GV ++ E S ++ ADE N Sbjct: 263 ASGGTTKVIRLRHADAKTLTEILKGVMGEVVKEGSAGGSSGGSAGNPGSSFSVFADEGLN 322 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 +LV+ D S+ ++ ++A+LD+RRAQV++EA IVE+ D G LGVQ A + A F Sbjct: 323 ALVVRGDPSLMQEAEQIVAQLDVRRAQVMIEAAIVEISDELGDQLGVQLAAGDESAGSFP 382 Query: 381 NTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD---WGVLLTALASN 437 G + + QG+ G + + + AG + D WG+L+ AL+S+ Sbjct: 383 VLGTNL-TSGQGMVGLNSVIGALVGDTIPQLAGGLT-VGAGQRDEDGVTWGLLIQALSSS 440 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVT 494 + ++L+TPSI+TLDN+ + VGQ+VP +G T +GD N F T+ER+ VG LKVT Sbjct: 441 SAANLLSTPSIITLDNQESEIIVGQNVPFRTGQSTVTGDGTTNPFTTIERRDVGLSLKVT 500 Query: 495 PQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT---FNTRTIQNAVLVKTGETVVLGGLLDD 551 P ++ V L +EQ ++ D S+ S G + N R I+ VL GETVVLGGL+ D Sbjct: 501 PTISADGLVRLVVEQ--TTEDISTTSVDGASDLITNKREIKTTVLADDGETVVLGGLIKD 558 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 + SKVPLLGDIP++G+LF S R KRNL+VF+RPTI+ + + EK+ R Sbjct: 559 DYQVSKSKVPLLGDIPVLGRLFSSESETRVKRNLLVFLRPTIMLGKADAVAATTEKFNR 617 >UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyphomonadaceae RepID=Q0ASR3_MARMM Length = 650 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 207/624 (33%), Positives = 331/624 (53%), Gaps = 36/624 (5%) Query: 9 CCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSND 68 C+L+ L++ A+++ NFN A+I+ ++ V G T ++DP+V+G +++ S Sbjct: 12 LCVLSVLVLAPMARAQDQVV--NFNQAEIQAVIDDVSAVTGYTFIVDPNVRGRVTITSQA 69 Query: 69 TFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTR 128 + +Y+Q FLS + ++GY+V+ +G ++V S + + R GD+ VT Sbjct: 70 PLTSDQYFQVFLSTMRVHGYTVVPTASGAYQIVPDQAGARSANPVNSNLR---GDQYVTA 126 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 +V L +V +RD ++R ++ G+ G+V E NVL++ A I +L +VI+ +D Sbjct: 127 VVRLNHVASRDALAVVRPLI--GAQGSVNATETGNVLVMVDYAENIARLRQVIRDLDR-D 183 Query: 189 TEKQQIIHLEYASAEDLAEILNQL-ISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 T +++ L SA D+ IL Q+ S + G+ + + + I +N++++ G A Sbjct: 184 TSVVEMVELTNVSAGDMTRILQQMRTSSTAGEDE--TIFNVAIAPIPASNTVLLRGNRDA 241 Query: 248 RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 R+ +L++ +D + RV YL +A +L+ +L V + L +G R PS Sbjct: 242 VDRMIALVRRVDSVSQSNRSFRVIYLSHADGEHLLPILQQVVDTLVAGEGTTRAPS---- 297 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 ++ TN+LVI AD VQ +L VI +LDIRR QVLVE IIVE+ D LGV Sbjct: 298 -----VSHHAPTNALVINADPDVQRQLELVIRQLDIRRPQVLVEGIIVEMSDSTARELGV 352 Query: 368 QW------ANKNVGAQQFTNTG---LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM 418 Q + + +F++ L + AA D + ++ + A + +G Sbjct: 353 QMLLAGGEGDTPLAMTRFSSNNPDLLALTGAATSPGDDDSDLNVSLRDAAINSLLGASGG 412 Query: 419 AAGFF--NGD---WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 GF NG +G++L A+ S+ +++LATPSI+ LDN+ A F GQ++PV +G Sbjct: 413 TLGFGGQNGSGNLFGLVLNAVESDVNSNVLATPSIMALDNEEAYFLSGQEIPVTTGEALG 472 Query: 474 SGD-NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF-NTRTI 531 S + N F TV+R+ VG KL V PQ+ EG+ V L I QEVSSV + N+ N R I Sbjct: 473 SNNTNPFRTVDREEVGVKLTVLPQITEGNTVRLHIVQEVSSVAGAVNAGSSDLITNKREI 532 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 VL GE +VLGGL+ + VP L +P VG+LFR + + NLMVFIRP Sbjct: 533 STTVLADNGEIIVLGGLIQQEDEISEDGVPGLRRLPGVGRLFRSEGSTTRRTNLMVFIRP 592 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQ 615 TIIR + ++L+ +Y R EQ Sbjct: 593 TIIRSEADMQALTDNRYDFIRNEQ 616 >UniRef50_Q5ZVW8 Type II protein secretion LspD n=7 Tax=Legionella RepID=Q5ZVW8_LEGPH Length = 791 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 208/651 (31%), Positives = 332/651 (50%), Gaps = 104/651 (15%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 N NADIR + V + GK +IDP VQG +S+ S+ S +E YQ FLS+L + GY+ Sbjct: 136 NLRNADIRAVIAEVSRITGKNFVIDPRVQGKVSIVSSTPLSSRELYQVFLSVLQVSGYAA 195 Query: 91 ITLDNG-FLKVVRSANVKT-SPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 I NG +K++ + + KT SP +++ P GD+++ ++P+ VP+ L P+LR +M Sbjct: 196 IP--NGEIIKIIPNIDAKTQSPDLLSGMKSPPRGDDMMVAVIPVHYVPSEQLVPVLRPLM 253 Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEI 208 S +V Y PSN+LIL+GRA+ I L E+IK+VD ++ L +A A D+A Sbjct: 254 PQWS--SVSAYAPSNMLILSGRANNIKSLAEIIKQVDSSSANGIDMVRLHHALAMDVANT 311 Query: 209 LNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE--EG 266 L L+ G + + I AD R+NS+++SG + R R+ L+ LD + S Sbjct: 312 LKDLVKTQPG---IGSRTQITIAADDRSNSILVSGSKTDRIRLRMLILKLDKDSSTGVNS 368 Query: 267 NTRVYYLKYAKATNLVEVLTGVSE-----KLKDEKGNARKPS------------------ 303 NT+V YL Y +A +LV +L G+++ + G +P+ Sbjct: 369 NTQVVYLNYLRAEDLVPILAGIAQANFSGNVGTTIGTITRPALDSTNPASSLANTSADGQ 428 Query: 304 ---------------SSGAMDN---------------VAITADEQTNSLVITADQSVQEK 333 +SGA N V I + TNS+++ A S+ Sbjct: 429 SSSLSSTSTSSAPMNASGATANTTSASTQNEGSTKPTVQIIGEPNTNSIILNAPASIIRI 488 Query: 334 LATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW-ANKNVGAQQFTNTGLPIFNAAQG 392 L TVI++LDI+ AQ+L+EA++ EV + + NLG++W +N+ G + G I N+ Sbjct: 489 LKTVISQLDIKPAQLLIEALVAEVDEKDVNNLGIEWGSNQQTGNPKDFRPGFAIINSKTR 548 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLD 452 + D++ + ALA + +IL+TPS+V LD Sbjct: 549 IDDFQAQ-------------------------------IYALAREQRANILSTPSVVVLD 577 Query: 453 NKLASFNVGQDVPVLSGSQT-----TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 N+ A +G+ V + + S T+ + F T +R V L V PQ+ G + L+I Sbjct: 578 NRQAKILIGKQVSIATTSYPNNAGGTTTASPFTTFDRVNVALHLYVRPQITRGQGIQLQI 637 Query: 508 EQEVSSVD---SSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLG 564 +Q ++D +++++T PTFN +I +V V++G+ VVLGGL+ D +K+P+LG Sbjct: 638 DQGNDTLDPATATTDNTTTPTFNISSIVTSVHVESGDIVVLGGLIQDSIGNDNNKLPILG 697 Query: 565 DIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 DIP +G+LF+ R KR LMVFI+P I+R++ ++ EKY RQ Q Sbjct: 698 DIPGIGRLFQRNIRNRDKRVLMVFIKPIILRNERDNLHVTGEKYNYVRQYQ 748 >UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Marinomonas sp. MED121 RepID=A3YCA1_9GAMM Length = 616 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 194/615 (31%), Positives = 331/615 (53%), Gaps = 36/615 (5%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 ++ C+L LL A + + N ADI F+ V + ++ ++DP V+G ++V S Sbjct: 14 VSLCMLIPLL------AIGKTWQVNLQQADISIFIRQVAEMTDRSFIVDPRVKGKVTVIS 67 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 N + + ++ FLS+L ++GY+V+ GF + N+ G+ D S G+ +V Sbjct: 68 NASLDEDAVFRLFLSVLTVHGYAVLESPEGF--KILPQNIAKQGGLNFDPSGGAPGELMV 125 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 TR++ ++N A +L P+LR ++ G++ N LI++ A I L ++++R+D Sbjct: 126 TRVLAIKNAVAAELVPILRPLIP--QYGHLAAVPTMNALIISDHADNIRSLEDLVERLDS 183 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 + +I L++A A D+ +L +L + + GK + ++ IVAD+RTN LI+ G Sbjct: 184 TIEGEMAVIPLKHAWAGDVITLLQELTTTTTGKGARSSDVTT-IVADERTNRLILKGKPG 242 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 +I L+ LD+ + + L+YA AT + ++L GV ++ ++GNA ++ Sbjct: 243 ELNQIKDLIIKLDIPAEKTSRLQYIPLQYADATKVADLLKGVVGDIEKKEGNAPTLETN- 301 Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 I ADE N+L++ ++ V ++ +V+ ++D+ RAQVL+EA+IVE+ + LG Sbjct: 302 ------IQADEDLNALLVNSEPGVMSEIYSVLKQIDVPRAQVLIEAVIVEITVTDEEELG 355 Query: 367 VQW----ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 VQW +++ + FT+ G ++A +A + ++AN + G A Sbjct: 356 VQWLIGGSDEIISGTNFTSAG----SSANTIASSINS---STAN------TLATGGTAIL 402 Query: 423 FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTV 482 + ++G ++ AL S +++L+TP I+TLDN+ A VG+ P +G + D+ F T Sbjct: 403 GDTNFGAIIQALQSKTNSNLLSTPKILTLDNQEARILVGETRPFQTGEYSEDSDSTFVTT 462 Query: 483 ERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGET 542 R+ VG LKVTP +N G+ V +E+ Q V S S S LG R ++ V+ +T Sbjct: 463 SREDVGLTLKVTPHINSGNEVKMEVFQTVESA-SDEASDLGTITTVREVETVVIAGDRQT 521 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRS 602 +VLGGL+ D E KVP LGD+P VG LFR +S K+NL+VFIRPTIIR Sbjct: 522 IVLGGLIQDNITESKQKVPFLGDLPFVGGLFRSSSFSIDKKNLLVFIRPTIIRGKAKADQ 581 Query: 603 LSKEKYTRYRQEQQQ 617 ++ +Y +R + Q Sbjct: 582 ITNTQYQGFRAVEIQ 596 >UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Proteobacteria RepID=A9IRR4_BORPD Length = 862 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 219/682 (32%), Positives = 328/682 (48%), Gaps = 106/682 (15%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ NF + DI + + + L+DP V+G +++ S + L Sbjct: 33 DQHVSLNFVDTDIPAVLRALSLFTQRNYLVDPRVKGKLTLVSERPVDRDTALTMLAGALR 92 Query: 85 LYGYSVITLDNGFLKVVRSANVK--------------TSPGMIADSSRPGVGDELVTRIV 130 + G++++ +D G +VV A+ K P +AD +R G E+VTR+ Sbjct: 93 MQGFAIVEVD-GVTRVVPEADAKLQGSAVVADAARGAAGPMPMADFARGARGSEVVTRVF 151 Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 L+ A +L P+LR ++ + N Y +N L++T A + ++ VI +VDV Sbjct: 152 SLKYENAANLLPVLRPLVPPNNPINA--YPGNNTLVVTDYADNLERIARVIAKVDVPSAI 209 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 ++ ++Y A DLA + QL+ G + +VAD RTNS+++ AR R Sbjct: 210 DTDVVPVKYGVASDLASLATQLLDAQGGDTAQ----RIAMVADPRTNSVLVRAGSPARTR 265 Query: 251 IT-SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV--SEKLKDEK----------- 296 + L++ LD E++ GN V YL+ A+A+ + EVL G+ S+ L Sbjct: 266 LARDLIRKLDSEQARPGNLHVVYLRNAQASRMAEVLGGLLASQALNGAGREGGGAGGSAM 325 Query: 297 -------GNARKPSSS-----------------------------GAMDNVA-------I 313 G A P +S GA D V+ + Sbjct: 326 GVAGRAGGRASAPRTSGTPVGMASGSSGSSGGGAFNQQPIERDDDGAGDAVSYSGGGATV 385 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 AD TN+L+I+A + + L VI +LD RRAQVLVE++IVEV G+QW Sbjct: 386 QADPSTNTLIISAPEPLYRSLREVIDQLDQRRAQVLVESLIVEVSQEKAAEFGIQWMT-- 443 Query: 374 VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN-GMAAGFFNG------- 425 GA +G I G GI SA A G+ G G Sbjct: 444 -GAGSLDGSGF-IGGTNLG------GSGIGSAGTGATTLDALGRGLTLGLVKGTVDVLGN 495 Query: 426 ---DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG----DNV 478 + VL AL ++ + +IL+TP+++TLDN+ AS VG+ VP ++G TSG +N Sbjct: 496 QVINLNVLARALQNSGEANILSTPNLLTLDNEPASILVGKTVPFVTGQYVTSGSAGSNNP 555 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD-SSSNSTLGPTFNTRTIQNAVLV 537 F T+ER+ +G KL + PQ++EG AV L+I QEVSS+D +SS+ T G N R I +VLV Sbjct: 556 FQTIEREDIGLKLNIRPQISEGGAVKLDIYQEVSSIDEASSSETTGLVTNKRAIDTSVLV 615 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD- 596 G+ +VLGGLL+D S VP L IPL+G LFRY +R K NLMVF+RP ++RD Sbjct: 616 DDGQIIVLGGLLEDRVTSTTSAVPGLSSIPLLGALFRYDKRQRTKSNLMVFLRPFVVRDA 675 Query: 597 -DDVYRSLSKEKYTRYRQEQQQ 617 D +L++ Y R Q Q Q Sbjct: 676 RDSANVTLNRYDYMRRAQSQAQ 697 >UniRef50_C7HZF2 General secretion pathway protein D n=1 Tax=Thiomonas intermedia K12 RepID=C7HZF2_THIIN Length = 884 Score = 288 bits (737), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 216/667 (32%), Positives = 327/667 (49%), Gaps = 91/667 (13%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 N NADI V+ V G+ ++DP V+G ++++ Q+ +Q L+ L L G++V Sbjct: 62 NLVNADIASAVQAVAAATGRNFIVDPRVKGQVTIQFEKPVPPQKVFQALLTQLRLAGFAV 121 Query: 91 ITLDNGFLKVVRSANVKTSPGMI----ADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 + D G +VV A+ K G + A S PG GD++VT+I L N A L P+LR Sbjct: 122 VEHD-GVFQVVPEADAKLQSGPVGVGLAPSRIPGRGDQVVTQIFQLRNASASSLLPVLRP 180 Query: 147 MMDAGSVGNVVHYEPS-NVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDL 205 ++ S N ++ PS N L++T A + ++ +I +DV + ++ L YA A DL Sbjct: 181 LI---SPNNTINVSPSGNALVVTDYADNLKRIARIIAALDVPTGTEVTVVPLTYAVASDL 237 Query: 206 AEILNQLISESHGKSQMPAL------------LSAKIVADKRTNSLIISGPEKAR-QRIT 252 A L +LI S P + A I+ + +NSLI+ A+ I Sbjct: 238 APTLQKLIDMQTVTSSGPGTPGVQAAVAGSGAMRAVILPETASNSLIVRATNGAQLAEIE 297 Query: 253 SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV------------------------ 288 +++ LD ++++ N V YL+ A A +L L GV Sbjct: 298 QMIRRLDRPQNDQDNIHVVYLRNANAADLARTLRGVLAAQGTGSAAGGQSQVKPQGGSQS 357 Query: 289 -------------SEKLKDEKGNARKPSSSGAMDNVAIT--------ADEQTNSLVITAD 327 G + P + + +T AD N+L+I A Sbjct: 358 MSGGSNNSNSSSYGSSGATSPGLGQAPEFAATSSDSTVTLPQGGTVYADNSLNALIINAP 417 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW-------ANKN--VGAQQ 378 Q V +L VI RLD+RRAQV VEA+I EV LG+QW N+N +G Sbjct: 418 QPVYMQLRRVIERLDVRRAQVYVEALIAEVDANKAAQLGIQWQAIAGSAGNQNAIIGGSN 477 Query: 379 FTNTGLPIFNAAQGVADYKKNGGITSANP-AWDMFSAYNGMAAGFFN-----GDWGVLLT 432 + G I N ++ GG ++A A + NG+ G + G+L Sbjct: 478 YGTGGSNIINLQAAIS----GGGSSAATALASGSLAIPNGLNIGILHNVAGMATLGLLAN 533 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG--SQTTSGDNV--FNTVERKTVG 488 L + + +IL+ P+++TLDN+ A VGQ+VP ++G +QT S V F T+ERK VG Sbjct: 534 FLQTQDGANILSAPNLMTLDNEEAKIVVGQNVPFVTGQYAQTGSSATVTPFQTIERKDVG 593 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGL 548 LKV PQ+ G A+ +++ QEVSS+ S++N+ G N R+IQ AVLV G+T+VLGGL Sbjct: 594 LTLKVRPQITAGGAIKMDVYQEVSSISSTTNAA-GIITNKRSIQTAVLVNDGQTIVLGGL 652 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKY 608 + D + SK+P LGDIP +G LFR S K +LMVF+RP ++R +D +LS+++Y Sbjct: 653 MQDNVSQNNSKIPGLGDIPGLGALFRSNSRTAQKTDLMVFLRPIVVRTEDQGNALSQQRY 712 Query: 609 TRYRQEQ 615 R Q Sbjct: 713 DTMRGMQ 719 >UniRef50_A7BV51 Bacterial type II and III secretion system protein n=1 Tax=Beggiatoa sp. PS RepID=A7BV51_9GAMM Length = 442 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 184/418 (44%), Positives = 255/418 (61%), Gaps = 29/418 (6%) Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL-KDEKGNAR 300 +G + R R+ +++ LD G+T+V YL+YA+A +LV VL G+S+ L +++K + Sbjct: 35 NGDKITRLRLRTMITHLDTPVKSIGDTQVIYLRYAEAKDLVNVLKGISDSLVENQKKKGK 94 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 PS + I ADE TNSLVITA VQ+ L TVI +LDIRRAQVLVEA+I E+ Sbjct: 95 SPSPEIKTN---IQADESTNSLVITATPKVQQNLQTVIRQLDIRRAQVLVEAVIAEISTD 151 Query: 361 NGLNLGVQW---ANKNV---GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 LGVQW NK G F N+G I + A A Y N +++ P A Sbjct: 152 TARELGVQWLLYGNKGTAPFGLSNFDNSGTRIADLAS--AGYLANNNSSTSLPNIGA-GA 208 Query: 415 YNGMAAGFFNG---DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 + G+ G FN ++GVLL ALAS+ ++L+TPS++TLDN+ A VGQ+VP ++G Sbjct: 209 FLGL--GRFNNSFLNFGVLLRALASDTNTNVLSTPSLLTLDNQEAEIVVGQNVPFVTGQY 266 Query: 472 TTSGDNV-------FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGP 524 T +G + F T++R+ +G KL+V PQ+NEG+AV LEIEQEVSS+ SS +T Sbjct: 267 TNTGTSGGGGVTNPFQTIQREDIGIKLRVKPQINEGNAVKLEIEQEVSSLSRSSQATTDI 326 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 N RTI+ V+V+ G VVLGGL+D+ ++ KVP LGD+P++G LFR ST++ KRN Sbjct: 327 VTNKRTIKTTVIVEDGNMVVLGGLIDEDLQQTAQKVPGLGDLPIIGHLFRSRSTQKIKRN 386 Query: 585 LMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ-QQRIDGKSKALVGSEDLPVL-DENTF 640 LMVF+ P IIRD +S KY+ R +Q QQR G L+ E++PVL D N F Sbjct: 387 LMVFLHPVIIRDAASENIISSGKYSYLRTQQLQQRAQG--LPLMPDEEIPVLPDLNDF 442 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 9/79 (11%) Query: 193 QIIHLEYASAEDLAEILNQLISES-------HGKSQMPALLSAKIVADKRTNSLIISGPE 245 Q+I+L YA A+DL +L IS+S GKS P + I AD+ TNSL+I+ Sbjct: 62 QVIYLRYAEAKDLVNVLKG-ISDSLVENQKKKGKSPSPE-IKTNIQADESTNSLVITATP 119 Query: 246 KARQRITSLLKSLDVEESE 264 K +Q + ++++ LD+ ++ Sbjct: 120 KVQQNLQTVIRQLDIRRAQ 138 >UniRef50_Q1JVV5 Type II and III secretion system protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV5_DESAC Length = 665 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 216/661 (32%), Positives = 347/661 (52%), Gaps = 73/661 (11%) Query: 8 TCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 + L L C + +F + ++ + V + GK + D S++G ++ S+ Sbjct: 17 SVLLAGPLTSACQAQTDGVGITLDFKDIELTDLIRTVSELTGKNFVYDDSIRGKATIISS 76 Query: 68 DTFSQQEYYQFFLSILDLYGYSVI----TLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 S E YQ FL++L++ GY+V+ T +K + +N+ T G +A D Sbjct: 77 QQMSVNEAYQLFLTVLNVKGYTVVPSGKTNKIVPIKSAKESNLPTMTGNLAQ-------D 129 Query: 124 ELVTRIVPLENVPARDLA-PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 + VTR++ LEN+ A D+A +L +M S NVV YEPSN+LI++ AS I +L +I+ Sbjct: 130 QFVTRMISLENINAADIAESILSPLMPKTS--NVVVYEPSNMLIISDSASNIQRLTTIIR 187 Query: 183 RVDVIGT-EKQQIIHLEYASAEDLAEILNQLISESHGK-----------SQMPALLSAKI 230 +DV G + Q+I L++A A++ A I N ++S + K + A ++K+ Sbjct: 188 ELDVPGALQDMQVIPLQFADAKETATICNDILSSGNTKATSRRRASKNVTTSSADATSKV 247 Query: 231 VADKRTNSLIISGPEKARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLV----EVL 285 +A +RTN L++ I SL+ LD E ++E +YYL+ A A L E+L Sbjct: 248 IAYERTNRLVVMATSDDMTTILSLIAELDQEPTQEHARINLYYLENADAEELSKTLNEIL 307 Query: 286 TGVSEKLKDEK----GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 +G+ + G P+++ NV ++AD+ TN+LVI A + +I +L Sbjct: 308 SGIKKPATSSSAAAGGKGTIPAAA-IQTNVTVSADKPTNALVINATPEDYVIIKDIIKQL 366 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 DIRR QV VEA+I+E+ LG Q GA + N G I N + A GG Sbjct: 367 DIRRKQVYVEALIMELSMDATEALGSQLQ----GAFEVGNEG--IVNLSSNSAP----GG 416 Query: 402 ITSANPAWDMFSAYNGMAAGFFNG-------------DWGVLLTALASNNKND----ILA 444 I S +P + ++ NG+ AG F+ +AL +K+D IL+ Sbjct: 417 ILS-DPESLLTTSVNGLLAGGFSKLIGVDTDGDGVDDSQVTAFSALIKLSKDDTNVNILS 475 Query: 445 TPSIVTLDNKLASFNVGQDVPVLSG--SQTTSGDNVFNTV--ERKTVGTKLKVTPQVNEG 500 P ++T DN+ A VG++VP+++ + +T D++ +V ERK V L+ TPQ+ EG Sbjct: 476 APRLLTSDNEEAEIVVGRNVPIITSRLTDSTGSDSLAQSVSVERKDVALTLRFTPQITEG 535 Query: 501 DAVLLEIEQEVSSVDSSSN--STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS 558 + V L + QE + + S +++GPTF TR I N VL + G+TVVLGGL+ +E +S Sbjct: 536 ELVRLNVYQETTDLTDSVGDVNSVGPTFTTRKISNTVLARDGQTVVLGGLISTNQQETIS 595 Query: 559 KVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD-DDV--YRSLSKEKYTRYRQEQ 615 KVPLLGDIPL+G LF+ + K NL+VFI PTII D +D+ ++++E + R + + Sbjct: 596 KVPLLGDIPLLGWLFKSKDNKEVKTNLLVFITPTIISDMEDLSNVTTINRETFDRIKNDP 655 Query: 616 Q 616 + Sbjct: 656 E 656 >UniRef50_Q7NRG7 Probable type II secretion system protein n=1 Tax=Chromobacterium violaceum RepID=Q7NRG7_CHRVO Length = 708 Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 221/692 (31%), Positives = 332/692 (47%), Gaps = 106/692 (15%) Query: 8 TCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 +C LLAA +N+ NF NADI V+ +G+ GK +IDP V+GT+++ S+ Sbjct: 15 SCNLLAA--------PQNDTVMLNFVNADIETVVKAIGEISGKNFIIDPRVKGTVNIVSS 66 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSR--P-GVGDE 124 + YQ LS L L G+S + NG +K+V A+ K + A +S+ P G GD Sbjct: 67 RPVPRALSYQVLLSSLRLQGFSAVE-GNGVIKIVPEADAK----LHAKASKRIPRGDGDR 121 Query: 125 LVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 L+T++ L N A L P++R ++ + V Y +N LI+T A I ++ +I+ V Sbjct: 122 LITKVFALRNSNANQLVPVIRPLVSPNNT--VAAYPQANALIVTDYADNIQRIESIIESV 179 Query: 185 DVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 + +I + + SA +LA LN+L+ E I+AD R N L++ Sbjct: 180 ESAAAGDTVVIPVLFGSAVELANSLNKLMQEGGADGG-----KTTILADARANVLLVRAD 234 Query: 245 EKAR-QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVL------------------ 285 + ++ SLLK LD N RV YLK A+A+ + + L Sbjct: 235 TPGKIGKVKSLLKVLDQPSQAGSNVRVVYLKNAQASEVAKTLRLLLASEGSPVQTRSTIN 294 Query: 286 ----TGVSEKL------KDEKGNARKPSSS--------------------GAMDNVAITA 315 TG S L +A+ P SS G M I A Sbjct: 295 TATSTGGSASLMPSTTGSGSGASAQNPVSSPDAGAAVAASSSSAPSGAGVGTM----IQA 350 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 D +N+L++ + + L VI LD RRAQV VEA+++EV +GVQWA NV Sbjct: 351 DSNSNALILNVPDPMYQNLRNVIDLLDKRRAQVYVEALVMEVTASRATKIGVQWA-ANVH 409 Query: 376 AQQFTNTGLP-----IFNAAQGVADYKKNGGITSANPAWDMFSAY--NGMAAGFFNG--- 425 LP + G +D T + S+ G+ A N Sbjct: 410 GNGLIGNSLPSPSKPLVPGGSGASD-------TPGTALGSLVSSLTGGGLTAAIINTITV 462 Query: 426 ------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD--VPVLSGSQTTSG-- 475 G+L AL + +++A+P +VT+DN+ A +GQ+ VP + T+G Sbjct: 463 GGQQIPTLGLLAQALEQEAQGNLVASPQLVTMDNEKAKIVIGQEIGVPTATYPAGTNGTS 522 Query: 476 DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-NSTLGPTFNTRTIQNA 534 + ++T +RKTVG L++TPQ++EG + ++I Q S+D ++ ++ GPTFN RT+ Sbjct: 523 NAPYSTYDRKTVGFGLEITPQISEGGTIRMKISQAADSIDQTTLSAAAGPTFNRRTLDTV 582 Query: 535 VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 V V G V LGGL + + KVPLLGDIP++G LF+Y ER K NLM+FIRPTII Sbjct: 583 VTVGDGGLVALGGLTQETTSNAEDKVPLLGDIPVIGNLFKYQGKERKKTNLMIFIRPTII 642 Query: 595 RDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 RD+ R+++ E+Y Y E R G+ L Sbjct: 643 RDEIGNRAVAGERYG-YVMEDAARNVGRKLPL 673 >UniRef50_C6XJ47 General secretion pathway protein D n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJ47_HIRBI Length = 660 Score = 278 bits (710), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 207/646 (32%), Positives = 338/646 (52%), Gaps = 49/646 (7%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYG-------------ANFNNADIRQFVEIVGQHL 48 K L+ +L + P A ++ G N + DI ++ V Sbjct: 7 KVLHGAALAMLGGFIAPMGQQAIADELGETSVRADGTSVHVMNLKDVDISVLIDDVSAIT 66 Query: 49 GKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKT 108 G T ++ PSV+G +SV S + +E +Q FLS L ++G++ I G K+V + Sbjct: 67 GHTFVVHPSVRGRVSVSSQTPLTNREVFQVFLSTLRVHGFTAIPSRGGVYKIVPEQSASA 126 Query: 109 SPGMIADSSRPGVG-DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLIL 167 G+ +RP VG D+ T ++ L N A + A +++ + + G + SN LI+ Sbjct: 127 EAGL----ARPSVGGDQFETAVIRLRNFDATEAAKMIKPITNPQ--GQLTASGESNTLIV 180 Query: 168 TGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLS 227 A+ I+++ +V+ ++D +E I L SA ++A +N + S G A Sbjct: 181 VDYAANISRVRKVVAQIDEDQSETLTI-ALTNMSATEMANTVNSMKSTGRGS----AGFK 235 Query: 228 AKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLT 286 A + NSLI+ G K + ++++LDV E+ + +V LK+++A ++ +L Sbjct: 236 VTATAVESNNSLIVKGDIKDVAEVHEIVRNLDVANREDDASLKVLSLKHSEAKDIAPILE 295 Query: 287 GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 + ++L ++ AR +++ ++ +AI E TNSLV++A V +L V+ LD RR+ Sbjct: 296 MMGQRLAEQ---ARPGANASSVPKIAIY--EPTNSLVVSASPMVLRQLERVVEELDQRRS 350 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVG-------AQQFTNTGLPIFNAAQGVA-DYKK 398 QVLVEAIIVE+ D LG+++ G A FT + + + A +A D Sbjct: 351 QVLVEAIIVELSDNAARELGLEFVLSGSGSSATPFAATNFTRSTTNVLSLAGALALDSDT 410 Query: 399 NG-----GITSANPAWDMFSAYNGMAAGFFNGD---WGVLLTALASNNKNDILATPSIVT 450 G + SA + + SA + G + D +G ++ A+ S+ +++L+TP ++T Sbjct: 411 VGEETVSSLRSAAISSLLGSAGGLLGIGGQSSDGTIFGAIINAVDSDITSNVLSTPHLLT 470 Query: 451 LDNKLASFNVGQDVPVLSGSQT-TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQ 509 +DN+ AS VGQ+VP+ +G T+ N F TVERK +G L+V PQ+ EGD++ L + Q Sbjct: 471 MDNEKASITVGQEVPITTGEALGTNNSNPFRTVERKPLGVTLEVEPQIGEGDSIKLNLRQ 530 Query: 510 EVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLV 569 EVSS+ S + T T N R I +L GE VVLGGL+ + +SKVPLLGDIP V Sbjct: 531 EVSSIFDSIDGTDFIT-NNREINTTILADDGEIVVLGGLIQEEETLNISKVPLLGDIPGV 589 Query: 570 GQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 G+LF T + + NLMVF++PTI+RD + + + +KY RQEQ Sbjct: 590 GRLFSSEGTTKKRTNLMVFLKPTIVRDAETMQRATDQKYRYIRQEQ 635 >UniRef50_Q1YQU4 Putative general secretion pathway protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQU4_9GAMM Length = 629 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 213/642 (33%), Positives = 338/642 (52%), Gaps = 51/642 (7%) Query: 11 LLAALLMPCAGHAE---NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 LL AL + + AE E NF +ADIR +E V + GK+ ++DP V+G +++ + Sbjct: 15 LLGALSIVLSMIAEISAGEVVRINFRDADIRSVIESVAEITGKSFVLDPRVKGKVTIIAP 74 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD-ELV 126 + Y+ LS + + G+ I D ++V P A + G GD L+ Sbjct: 75 EAIDSDLLYEAVLSAIQVQGFQAIE-DGAVTRIV--------PFTQAFNFAGGAGDNRLI 125 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 T+++ +E+V L P+L+ +M +G+ N + SN +++T S I +L +I +D Sbjct: 126 TKVIQIEHVQVATLVPVLKPVMSSGARLNA--FTQSNSMVVTDVQSNILRLESLIADLDD 183 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 ++I L+ SA + I QL K+Q +V D N +IISG Sbjct: 184 PTLNAVEVIRLKNISAGEAVYIAGQL---KQLKNQ-----DLSLVEDGMNNRVIISGTAS 235 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV--SEKLKDEKGNARKPSS 304 AR+ ++LK+LD +++G+ V YL Y++A + ++ G+ S+ G A Sbjct: 236 ARRAFKAMLKTLDQPSTKKGSVEVIYLDYSRAAEMKPIVEGMLQSDVFLQLAGEAVADKK 295 Query: 305 SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN 364 + A + I DE N+LV+ A +V ++ V+A+LD R QVL+EA+I E+ + Sbjct: 296 AKAAYQIQI--DELNNALVVAAPTAVIREIKNVVAQLDRSRPQVLIEAVIAELSEDQAQE 353 Query: 365 LGVQ--WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 L Q +++KN G GL G++ + P M AG Sbjct: 354 LSSQLAYSSKNRGGYLTNFDGLLATLTGLGISGVEPTAAELGLLPKKVM------AVAGD 407 Query: 423 FNGD----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS---G 475 F+ + G+L+ AL ++ IL+TPS+VTLDN+ A+ +VG++VP +GS T+S Sbjct: 408 FDSETGKGIGLLIQALKTDGSTKILSTPSVVTLDNEEATLSVGEEVPFQTGSFTSSNNGS 467 Query: 476 DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAV 535 +N F T+ R+ VG KLKV PQ+++GD+V LEIEQE S V S T + T+Q V Sbjct: 468 NNPFTTINREEVGVKLKVKPQISKGDSVRLEIEQESSKVKSGVPGL--QTTSKSTMQTNV 525 Query: 536 LVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 L++ GE ++LGGL++D + +KVPLLGDIPL+G+LFR TS ++ LM+FIRPTIIR Sbjct: 526 LIQDGELLILGGLIEDQTGGSATKVPLLGDIPLLGRLFRSTSKADSQSVLMMFIRPTIIR 585 Query: 596 DDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 + R LS KY+ ++ +D K L+ P+L+E Sbjct: 586 TAEDARKLSGSKYSHLI---KRDMDSKESGLIQ----PMLEE 620 >UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1Q9C2_PSYCK Length = 750 Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 203/665 (30%), Positives = 326/665 (49%), Gaps = 68/665 (10%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 CL L G E + N +ADI+ F+ V + ++DP + G ++V SN Sbjct: 27 CLAIPLWAASTGLVSAESWKVNLQDADIKAFINEVATITNQNFVLDPRINGNVTVISNKP 86 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 S+ E YQ FLS++ + G + I D+G + NV G+ D VG+ L TR+ Sbjct: 87 LSRDEIYQLFLSVMQVNGIAAI--DSGTTIKLVPDNVAKQTGVAVDLRGESVGETLATRV 144 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 + L N A ++ ++R +M + + N L+L+ RA ++N+L +I+ +D Sbjct: 145 IYLTNTQAAEVLGVIRPLMPPSA--HAAAVPGVNALVLSDRADSLNQLTALIRDLDSNVN 202 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 + Q+I L + AE + E+++ L++ S G Q K++AD ++ L++ G + Sbjct: 203 DSLQVIPLRHVDAERMMELISALVA-SAGSGQATGNNQLKVIADTASDRLLVKGSPEMIA 261 Query: 250 RITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGV----------------SEKL 292 ++ ++ LD S RV+ LKYA A ++ E+L G+ S L Sbjct: 262 KVQEMVNQLDTTPSRRLSGLRVFRLKYASAGHIAEMLRGLLASQSINSSGGSSTLESASL 321 Query: 293 KDEK--------------------GNARKP----SSSGAMDNV-----AITADEQTNSLV 323 D G A P SS+G + +I ADE N+++ Sbjct: 322 NDAAATGSSLTGGANSKVGSNSIGGTAATPLPNNSSAGTSIGIGGRPFSIIADETQNAVI 381 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA----NKNVGAQQF 379 + A + ++ + +LD RR+QVL++A IVEV + LGVQWA N G F Sbjct: 382 VNAAPELMFEIEDAVNQLDSRRSQVLIQAAIVEVSGDDATQLGVQWALGNANSGYGVVNF 441 Query: 380 TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-----WGVLLTAL 434 N G +A +A +GG + A + A G+ + + +G +L AL Sbjct: 442 NNVGA----SAVSLAAAALSGGTGISAAAGSIAGALLGIGSSSKDSKGNAQFYGAILQAL 497 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKL 491 S+ ++L+ PSI+TLDN+ AS VGQ+VP ++GS TT D N F T++R+ +G L Sbjct: 498 DSSTSANLLSMPSILTLDNEKASILVGQNVPFVTGSYTTGSDSSTNPFQTIDRQDIGINL 557 Query: 492 KVTPQVNEGDAVLLEIEQEVSSV-DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 V P + V LE+ QEVSSV S+ + G N I +L +T+ LGGL+ Sbjct: 558 NVIPHIGANGTVRLEVSQEVSSVVPGSAGNASGLITNKSLINTTILADDQQTIALGGLMR 617 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 D S + KVP LG++PL+G+LFR + K NL++F++PTI+RD S+++ KY + Sbjct: 618 DNSTTRQQKVPGLGNVPLIGRLFRSDNDNSQKSNLIIFLQPTILRDGGAVASVTERKYNQ 677 Query: 611 YRQEQ 615 R Q Sbjct: 678 MRVLQ 682 >UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gammaproteobacteria RepID=B4SL34_STRM5 Length = 793 Score = 274 bits (700), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 217/687 (31%), Positives = 330/687 (48%), Gaps = 94/687 (13%) Query: 1 MKGLNKITCCLLAALLM-----PC---AGHAENEQYGANFNNADIRQFVEIVGQHLGKTI 52 M+ + + C AL++ P A A +E N DI + + + G+ Sbjct: 1 MRVMRSLACSTALALVVGMAHVPAPVLAQDARDEPVQLNLVETDIGGVLRMAARFTGRQF 60 Query: 53 LIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGM 112 L+DP V G ++V S+ S+ + YQ L L + G++V+ + G +VV A+ K + Sbjct: 61 LVDPRVTGKMTVVSDGPVSRTQAYQLLLGALRMRGFAVVE-NGGVSRVVPQADAKL---L 116 Query: 113 IADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEP-SNVLILTGRA 171 G G E+ TR L A L +LR M+ S N + P +N L++T A Sbjct: 117 GGRVGAGGAGGEVATRTFALRYENAAALVAVLRPMI---SPDNPITANPGNNTLVITDYA 173 Query: 172 STINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIV 231 + ++ VI VD ++ L+ A D+A ++ L+ + + ++ Sbjct: 174 DNLERIARVIASVDTPAGMDTDVVKLQQGIAVDVAAMVAPLLDAQGAEPNQKVV----VM 229 Query: 232 ADKRTNSLIISGPEKARQRIT-SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE 290 AD R+NS+++ R R+ L++ LD + E GN V YL+ A+A L VL GV Sbjct: 230 ADPRSNSVLLRSSSPGRTRLARQLVEKLDKAQDESGNLHVVYLRNAQANQLAGVLRGVVA 289 Query: 291 KLKDEK--------------------------------GNA----------RKPSSSGA- 307 D GNA R P +G+ Sbjct: 290 GQSDAPAMGSNEGITPLPGDANRSTPAQPSQPQQAKTGGNALESQRLDPNRRDPIDAGST 349 Query: 308 ---MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN 364 + +++ AD TN+L+I+A + V L VI +LD RRAQVLVE++IVEV + Sbjct: 350 GFSQNGISVQADVATNTLLISAPEPVYRNLRRVIDQLDQRRAQVLVESLIVEVNQTDAAE 409 Query: 365 LGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN 424 LGVQW N + F T N G+ T+A D+ +G+ G + Sbjct: 410 LGVQWMLGN--GRTFGGTHFGGTNGGSGLN--------TAARTTLDVLP-KDGLKIGVID 458 Query: 425 G-----------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 G + L AL S +IL+TP+++TLDN+ AS VGQ VP +SG T Sbjct: 459 GTINLPGVGQILNMKALANALQSKGGANILSTPNLMTLDNEAASIMVGQTVPFVSGRYVT 518 Query: 474 SG----DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS-SSNSTLGPTFNT 528 G +N F T+ R+ VG KL+V PQ++EG V L+I QEVSS+D+ S+NST+G N Sbjct: 519 DGGGGSNNPFQTIVREDVGLKLRVRPQISEGGTVKLDIYQEVSSIDAQSANSTVGIITNK 578 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 R + +VL+ G+ +VLGGLL+D VP LG IP++G LFR + +RAK NLMVF Sbjct: 579 RALDTSVLLDDGQIMVLGGLLEDSVSHGRDAVPGLGKIPVLGALFRSDTRKRAKTNLMVF 638 Query: 589 IRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 +RP ++RD + L++++Y R Q Sbjct: 639 LRPHVVRDPAAGQRLTRDRYDYMRNAQ 665 >UniRef50_C4K9Q5 General secretion pathway protein D n=1 Tax=Thauera sp. MZ1T RepID=C4K9Q5_THASP Length = 728 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 207/658 (31%), Positives = 324/658 (49%), Gaps = 82/658 (12%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 C HA E NF NA+I ++ +G+ G+ LIDP V+G I++ +N + + YQ Sbjct: 39 CLVHAAGEPVALNFQNAEIDAVIQAIGRISGRNFLIDPRVKGKINLVTNTPVAPELTYQI 98 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG----DELVTRIVPLEN 134 LS L L GY+ I ++G K+V A+ K G+ S RPG G D LVT++ L + Sbjct: 99 LLSALRLQGYAAIE-ESGVTKLVPEADAKLH-GVPVVSGRPGAGAARGDRLVTQVFALRH 156 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 A + ++R ++ A + V + +N L++T A + +L VI +D + + Sbjct: 157 ESAVHMVNVVRPLVSANNA--VTAFPGNNTLVVTDYAENLRRLATVIDSIDTPQGDVA-V 213 Query: 195 IHLEYASAEDLAEILNQLISESH-GKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRIT 252 + L++A A DLA +L +L++E G L +IVA+ +NSL++ +R + Sbjct: 214 LQLQHAMANDLAPVLVRLLAEQQTGGQNAGGLAPPQIVAEPNSNSLLVRADTPSRLAALR 273 Query: 253 SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT-------------------------- 286 L+ +LD G+ RV YL+ A A + L Sbjct: 274 QLVTALD-RPGAGGDIRVVYLRNADAVQVAATLNAALAGEGGTSDAASTQPLSRNSGGGS 332 Query: 287 --GVSEKLKDEKGNARKP---------SSSGAMDNVA----ITADEQTNSLVITADQSVQ 331 G G A P S++G + + + D N+L+ITA +V Sbjct: 333 GFGTDSSAPSGMGVASAPLRGTGSTSGSAAGGLSSATRGGMVQPDAVNNALIITAPDAVY 392 Query: 332 EKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN-------VGAQQFTNTGL 384 L VI +LD RRAQV +EA+I E+ G QW +GAQ F + G Sbjct: 393 RNLRAVIDQLDRRRAQVYIEALIAEISTERAAEFGFQWVAGASAGEVGVLGAQLFNSGGG 452 Query: 385 PIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN----GD---WGVLLTALASN 437 + G AD + +T N ++ + G N G+ GVL L + Sbjct: 453 NLGQLIAGSADRTR---LTLPNNGLNLV-----VGGGKVNVPGIGEVLSLGVLARFLENE 504 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-----NVFNTVERKTVGTKLK 492 +IL+TP+++TLDN+ A VG+++P ++G +G N F T+ER+ VG L Sbjct: 505 VSANILSTPNLITLDNEEARIVVGRNLPFVTGQYANTGGGTTPANPFQTIERRDVGLTLH 564 Query: 493 VTPQVNEGDAVLLEIEQEVSSV-DSSSNSTLGPTFNT-RTIQNAVLVKTGETVVLGGLLD 550 V PQ++EG A+ L+I QE S+V S+ ++ G + T R+I++ VLV G + LGGL++ Sbjct: 565 VKPQISEGGAIRLQIYQEASAVVGSAESAAAGNSVTTKRSIESMVLVDDGAILALGGLVE 624 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKY 608 D KVP+LGD+P G LFRY + +RAK NL+VF+RP I+RD + Y +L+ +Y Sbjct: 625 DSYSGGEEKVPVLGDLPFAGSLFRYDTRKRAKTNLVVFLRPVILRDRESYAALTDSRY 682 >UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burkholderiales RepID=B1Y329_LEPCP Length = 753 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 211/662 (31%), Positives = 329/662 (49%), Gaps = 71/662 (10%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 NF NA++ + + + I++DP V+GT+++ S +Q+E + +L+ L G++V Sbjct: 59 NFVNAEVEAVSRAMATIVNRQIIVDPRVKGTMTLYSEQPLTQREAFLNYLAALRGLGFAV 118 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA 150 + + G LKVV A K G ++ S GD++VT++ +++ +L +LR ++ Sbjct: 119 VDVA-GLLKVVPEAEAKLQTGTVSVGSVLRKGDQIVTQVFKVQHENVNNLVTVLRPLI-- 175 Query: 151 GSVGNVVHYEP-SNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEIL 209 + N ++ P +N L++T A + +L ++I +DV + ++I L++ A DLA ++ Sbjct: 176 -TPNNTINANPGNNSLVITDYADNLQRLAKIIGALDVPSSTGVEVIALQHGVASDLAPLV 234 Query: 210 NQLISESHGKSQMPALLSA---KIVADKRTNSLIISGPEKAR-QRITSLLKSLDVEESEE 265 Q +++ G + A+ SA +VAD RTNSL++ P AR + +++ LD + Sbjct: 235 -QRFADTSGVTAAGAVPSAGAVSVVADPRTNSLLVRAPNAARLAAVMAVIDKLDRPSANG 293 Query: 266 G---NTRVYYLKYAKATNLVEVL---------------------TGVSEKLKDEKGNARK 301 G N V YLK A AT L +VL + G A Sbjct: 294 GPGGNIYVVYLKNADATKLAQVLRAAYGGAGGGSSGGSAATGSLASAGQANTAAGGTATG 353 Query: 302 PSSSGAMDNVA----------ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 SS A VA I AD TNSL+I+A + V +L VI +LD RRAQV VE Sbjct: 354 MSSVQATTPVAASASPSTGGFIQADPATNSLIISAPEPVYRQLRGVIDQLDARRAQVYVE 413 Query: 352 AIIVEVQDGNGLNLGVQWAN---------KNVGAQQFTNTGLPIFNAAQGVADYKKNGGI 402 ++IV++ G QW V F G I N + G A + Sbjct: 414 SMIVKMDATQAAEFGFQWQGLLGQSGDRYGLVAGTNFGTGGNNIVNLSVGAA---TGAAL 470 Query: 403 TSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 A + A NG+ G L L SN ++L+TP+++ LDN+ A +GQ Sbjct: 471 PGAGLNVGLLKAINGVYT------LGALARFLESNTGANVLSTPNLIALDNEEAKIVIGQ 524 Query: 463 DVPVLSGSQTTSGD-----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV--D 515 +VP ++GS T +G N F T+ERK VG L+V PQ+ EG V + I QE SSV + Sbjct: 525 NVPFVTGSFTNTGTSNGSANPFQTIERKDVGLTLRVKPQIGEGGTVRMVIYQENSSVVAN 584 Query: 516 SSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRY 575 +++NS GPT + I+ V+V G +VLGGLL D +VP L IPL+G LFR Sbjct: 585 TTTNSA-GPTTDKSAIETTVVVDDGSIMVLGGLLKDDYGSGEDRVPGLASIPLIGGLFRS 643 Query: 576 TSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVL 635 + +R K NL+VF+RP ++R +L+ ++Y R QQ K ++G + PVL Sbjct: 644 ENRKRTKSNLLVFLRPVVMRSQQDANALTLDRYDAIR-AQQMNEQPKPSTVLGINESPVL 702 Query: 636 DE 637 E Sbjct: 703 PE 704 >UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH25_DESMR Length = 685 Score = 268 bits (685), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 199/617 (32%), Positives = 323/617 (52%), Gaps = 58/617 (9%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 NF+ D+R F++ + Q GK +ID +V+G ++V S S E Y+ F S+L++ GY+ Sbjct: 68 NFDGVDLRAFIKYISQVTGKNFVIDDAVKGNVTVISPKPLSPAEVYKVFESVLEVNGYTA 127 Query: 91 ITLDNGFLKVV--RSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 + +N F+K+V +++ ++ P + + D +VT+I+PL+N+ A +L L ++ Sbjct: 128 LPTEN-FVKIVPAKTSRARSMPVIDGRETVTNPADAVVTQILPLQNIRAGELRKTLAPLV 186 Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ-QIIHLEYASAEDLAE 207 G + + +N LI+T I ++I ++ ++D+ + + HL++ASA +++ Sbjct: 187 SPD--GMLADFADTNALIVTDYRPNIQRIIGIVDQLDLSSAKATLHLFHLKHASAAKISQ 244 Query: 208 ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES-EEG 266 L +L+S+S K + +V ++RTN++I+ + ++ LL LDV E+G Sbjct: 245 KLEKLLSQSAAK-EGGGQTKISVVPEERTNAVIVLAEPQYVAQVKGLLAKLDVPNPMEQG 303 Query: 267 NTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK---PSSSGAMDNVAITADEQTNSLV 323 N VY L++A A NL +VL + K G+A K P+ SG + VA D+ TNSL+ Sbjct: 304 NLHVYKLQHADAENLSKVLNELFTKGSTATGDAAKAQAPTVSGGFNFVA---DKSTNSLL 360 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG 383 +TA + V+ +LD R QV VEA+I+EV ++ GV N NV +Q Sbjct: 361 VTAAPEDFAFVDQVVKKLDAPRKQVYVEALIMEVSTDKSVSFGV---NLNVANKQ----- 412 Query: 384 LPIFNAAQGVADYKKNGGI-TSANPA-----WDMFSAYNGMAAGFFNG------------ 425 G+ D K G + S+NPA ++ A+ A G G Sbjct: 413 -------SGLGDGKYGGLLFASSNPAGYESLYNSSGAFVPPAGGSLGGLAFPVKIGEVIY 465 Query: 426 -DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS----GSQTTSGDNVFN 480 + ++ A S+N +I+ATP ++TLDN+ A+ V ++ P L+ G TT D + Sbjct: 466 SNLQAMINASKSDNSFNIIATPQLMTLDNEEATITVAENRPYLTSQDVGQSTT--DRPYQ 523 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG---PTFNTRTIQNAVLV 537 + K VGT LKVTPQ+NEGD++ L+++QE S +D + G PT R + ++ Sbjct: 524 RFDYKDVGTTLKVTPQINEGDSIKLKVKQETSRIDETVTKETGALQPTTRKRVTETTIMC 583 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 + GET+VL GL+ E SKVP LGD+P+VG LF+ S + NL VFI P I Sbjct: 584 RNGETIVLSGLIGKSRAEGNSKVPGLGDVPVVGWLFKNKSVADERTNLYVFITPRITAPG 643 Query: 598 -DVYRSLSKEKYTRYRQ 613 D R L +K RQ Sbjct: 644 VDSDRLLHAKKMEIERQ 660 >UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE34_DESAA Length = 716 Score = 267 bits (683), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 203/670 (30%), Positives = 342/670 (51%), Gaps = 49/670 (7%) Query: 15 LLMPCAGHAENEQYG---ANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFS 71 +L P + E G +F +A+I +FV+ + + GK ++D V+G I++ S + Sbjct: 52 ILEPSDSGVDQEDEGLIQIDFEDAEIAEFVKYISEVTGKNFVLDSKVRGKITIMSPKKVT 111 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKT-SPGMIADSSRPGVGDELVTRIV 130 E YQ FLS+L++YGY+ + + KVV + + KT +P R D++VT+++ Sbjct: 112 PDEAYQVFLSVLEVYGYATVKV-GSLTKVVPAPDAKTKNPETRLFDHRISETDKVVTQLI 170 Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT- 189 ++ D+ L + M+ GS+ +V Y P+N LI+T S I +L++++K +DV G Sbjct: 171 SMDFAQVEDVVKLFQPMVSKGSL--LVAYSPTNTLIVTDVESNIQRLVKILKAIDVHGVG 228 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLS--------------AKIVADKR 235 E+ ++ L +A A ++A++ L S P + + KIVAD+R Sbjct: 229 EELTVVPLTHAGAAEMAKLATTLFESKGNTSSRPRVNTKSKNAQTVAATGDVVKIVADER 288 Query: 236 TNSLIISGPEKARQRITSLLKSLDVEE-SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKD 294 TNSLII + + I S ++ LD E+ + EG +V YL+ A A +V+VL + K D Sbjct: 289 TNSLIILASKDDTEAILSFVELLDKEQPTGEGKIQVVYLQNATAEEVVKVLQALPGKQTD 348 Query: 295 EKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 K A P S +V I+AD+ TNS++I AD+ + L VI +LDI R+ V +EA+I Sbjct: 349 TKNKAEAPVVS---KDVQISADKATNSIIIVADKEDFKVLKDVIEKLDIPRSMVYIEALI 405 Query: 355 VEVQDGNGLNLGVQWA---NKNVGAQQ----------FTNTGLPIFNAAQGVADYKKNGG 401 +EV LGV+W N V Q + +F +A G Sbjct: 406 MEVSTDKAFELGVEWRLGDNFEVNGDQAVGWAGSGGAGSEGAYTLFPTTAEIA-----SG 460 Query: 402 ITSANPAWDMFSAYNGMAAG-FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNV 460 + A+ M + G + G ++ A +++ IL+ P I+ +N+ + V Sbjct: 461 VAGFPTAFSMGVIGENIKIGDIYFPTLGAVMRAYKNDSDVHILSAPHILATNNEESEIYV 520 Query: 461 GQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS 520 G++VP ++ T+S + + E + VG LK+TPQ+++ V L++ QEV+ + ++ + Sbjct: 521 GKNVPYVTRQDTSSSSVDYTSYEYRDVGVTLKITPQISQERLVRLDVFQEVTRLIETAGT 580 Query: 521 TLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTER 580 T PT R V+VK G T+V+GGL+D+ ++ KVP LGDIP +G FR + +R Sbjct: 581 TTQPTTYKRKADTTVIVKDGNTIVIGGLIDESTEGGTYKVPCLGDIPWLGWAFRSKTEKR 640 Query: 581 AKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRID---GKSKALVGSED-LPVLD 636 K NL VF+ P II+ + +S++K ++ ++ I+ K + ++ ED LP Sbjct: 641 EKTNLYVFLTPRIIQTPTEAKEISEKKIESIKEVEKNVIELYKRKPEQVINVEDYLPNSP 700 Query: 637 ENTFNSHAPA 646 E PA Sbjct: 701 EKVDEFQEPA 710 >UniRef50_Q221L0 Type II and III secretion system protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221L0_RHOFD Length = 702 Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 213/624 (34%), Positives = 311/624 (49%), Gaps = 63/624 (10%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 NF+NADI + G +++DP V+GT+++ ++ S++ F + L L G+++ Sbjct: 50 NFSNADIEAVARTMATITGTNVVVDPRVKGTLTLVTDKPVSRRAAMNQFQAALRLQGFTM 109 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRP---GVGDELVTRIVPLENVPARDLAPLLRQM 147 + G KVV A+ K G + S +G+++ T+I L A +L +LR + Sbjct: 110 VE-SAGLYKVVPEADAKLQSGAVTVSDEAIGGALGNQITTQIFKLNFESANNLVAVLRPL 168 Query: 148 MDAGSVGNVVHYEP-SNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLA 206 + S N ++ P +N L++T A + ++ +I VDV +I+ L++A A DLA Sbjct: 169 I---SPNNTINVNPGTNSLVITDYADNLRRMARIIAAVDVSNATDVEILPLKHAIATDLA 225 Query: 207 EILNQLI-SESHGKSQMPALLSAK--IVADKRTNSLIISGPEKAR-QRITSLLKSLDVEE 262 ++ +L+ S + G + A S K +VA+ R+N+LI+ AR + SL+ LD Sbjct: 226 PLVLRLVESSAAGTAPGQADTSFKTILVAEPRSNALILRAANPARVALVKSLVDKLDQPA 285 Query: 263 S-----EEGNTRVYYLKYAKATNLVEVLTGV------------SEKLKDEKGNARKPSSS 305 + E GN V YLK A AT L L A S++ Sbjct: 286 APGLNGEAGNIHVVYLKNADATKLAATLRAAMTGQAPAAAAPGVAAAATVAVVAATQSTT 345 Query: 306 GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 G I AD TNSL+ITA + +L VI RLD RRAQVLVE++IVEV Sbjct: 346 GGQ----IQADVATNSLIITAPEPQYRQLRAVIDRLDGRRAQVLVESLIVEVNADRAAEF 401 Query: 366 GVQWANKNVGAQQFTNTGLPIFNAAQGVADY-KKNGGITSAN--------PAWDMFSAYN 416 G+QW P+ A GV N G N A + N Sbjct: 402 GIQWQG-------------PLGKAGDGVIGLLGTNFGAAGKNIINLATGAGAVAPGAGLN 448 Query: 417 GMAAGFFNGDW--GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT-- 472 A NG + G L L ++ ++L+TP+++TLDN+ A +G++VP ++GS T Sbjct: 449 FGAVQRTNGVYVLGFLANFLETSGSGNVLSTPNLLTLDNEEAKIVIGENVPFVTGSYTSN 508 Query: 473 -TSGDNV--FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNT 528 TSG +V F TVERK VG LKV PQ+NE V + I QE S+V + + GPT + Sbjct: 509 NTSGASVNPFTTVERKDVGLTLKVKPQINEDGTVKMVIYQETSAVKAGTEKDANGPTTSK 568 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 RTI++ VLV G VVLGGLL D KVP LGD+PL G LF+ + R K NLMVF Sbjct: 569 RTIESTVLVDDGSIVVLGGLLQDKYSGNQDKVPGLGDVPLFGNLFKSEARTRNKTNLMVF 628 Query: 589 IRPTIIRDDDVYRSLSKEKYTRYR 612 +RP ++RD LS ++Y R Sbjct: 629 LRPVVVRDAHASDQLSMDRYDLMR 652 >UniRef50_B8GXR3 Type II secretion pathway protein D n=3 Tax=Caulobacteraceae RepID=B8GXR3_CAUCN Length = 687 Score = 265 bits (676), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 200/631 (31%), Positives = 315/631 (49%), Gaps = 70/631 (11%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 N +ADIR F++ V + G T +IDP V+GT++V SN +++E ++ FL+ L + Sbjct: 38 NVQDADIRVFIQDVAKSTGTTFIIDPRVKGTVTVASNGPLNRRELFEVFLATLRANNFVA 97 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA 150 NG ++ S N P G + T + L + A +L+ ++ Sbjct: 98 TPAGNGAYRIEPSENAARQPS--------AAGGQFATEVFRLRTLDAASAVEMLKPLV-- 147 Query: 151 GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH---LEYASAEDLAE 207 G G VV V+++ A + ++ ++ +VD + + ++H L ++SA ++A+ Sbjct: 148 GPQGQVVANPRGAVVVVADYADNVRRIRGLLAQVD----QDRAMVHTVTLTHSSAREIAQ 203 Query: 208 ILNQLISE--SHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEE 265 +LN +++ + GKS A+ +V +NS+++ G A QR+ ++ LD Sbjct: 204 VLNDMLATPGAEGKSGRGAV---TVVPVDSSNSVLLRGDSDAVQRLLPVIADLDRRAESS 260 Query: 266 GNTRVYYLKYAKATNLVEVLT----------------GVSEKLKDEKGN----------A 299 + RV +L++A A ++ VL G+S + A Sbjct: 261 DDVRVVFLRHANAEQMLPVLQQLVGQATTSVTTSSSRGLSNARTATGASTATTAPSAPVA 320 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 PS++G +A N+L+I A Q LA VI +LD+RR QVLVEAI+VEV D Sbjct: 321 ATPSANGPQATIARFPG--ANALIINAPPETQRTLAEVIRQLDVRREQVLVEAIVVEVTD 378 Query: 360 GNGLNLGVQW----ANKNVG--AQQFTNTG---LPIFNAAQGVADYKKNGGITS-ANPAW 409 G LGVQ+ N + A +TN LP+ AA + S + A Sbjct: 379 GTAKQLGVQFLLGGTNGTIPFVATNYTNATPSLLPLVGAAATTTSGADTEALKSLRDAAV 438 Query: 410 DMFSAYNGMAAGFF--NGD--WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP 465 +G+ +G +GD +G ++ A+ + +++L+TPSI+TLDN+ A VGQ+VP Sbjct: 439 SSLLTASGVTSGVVGRSGDALFGAIINAVKKDTGSNLLSTPSIMTLDNEEARILVGQEVP 498 Query: 466 VLSGSQT-TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD---SSSNST 521 + +G S N F T++R+ VG +L+V PQ+N G + L + QEVSSV S +S Sbjct: 499 ITTGEVLGDSNANPFRTIQRQNVGIQLEVKPQINAGGGITLFLRQEVSSVAGPVSVGSSE 558 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 L N R I+ LV G+ VVLGGLLD + + P LGD+P +G LFR T+ ER Sbjct: 559 L--IINKREIETTALVDDGDIVVLGGLLDQQETQSAQRTPGLGDVPGLGALFRSTARERK 616 Query: 582 KRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 K NLMVFIRP IIR R+L+ +Y R Sbjct: 617 KTNLMVFIRPRIIRSSADARNLTAPRYDYMR 647 >UniRef50_B3E7M1 General secretion pathway protein D n=8 Tax=Geobacter RepID=B3E7M1_GEOLS Length = 648 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 199/654 (30%), Positives = 331/654 (50%), Gaps = 69/654 (10%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 HA + NF + +I V+ + + GK ++D V+G +SV S SQ E + F S Sbjct: 22 HAAAQGVIMNFTDVEIATMVKFISELTGKNFVLDERVKGKVSVFSPSKLSQDEAFALFTS 81 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 +L+L G+++I + KVV + + K + +AD R +GD + R+ PL + +++ Sbjct: 82 VLELKGFTLIQAGKVY-KVVPTGSAKQAGMKLADKERIPLGDAFLARVFPLTQISSQEAL 140 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT-EKQQIIHLEYA 200 L+ ++ G++ + P N+L++ AS + K+ +++ +D E ++++L++ Sbjct: 141 TFLQPIIS--KEGHIGSFGPGNMLLVVDAASNLQKVADILSLIDTPQRREGAELVYLKHG 198 Query: 201 SAEDLAEILNQLISE------SHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 SAE + ++L + ++ + G +Q + +++AD R N++++ GPEK ++ I SL Sbjct: 199 SAEGVTKVLQEWLAGRGARQVAVGTTQSANSGAVQVLADTRLNAVLLFGPEKDKKDIRSL 258 Query: 255 LKSLDVEESEEGNT-RVYYLKYAKATNLVEVLTGVSEKLKDE-----KGNARKPSSSGAM 308 + LDV E + V +L+ AT + +VL GV + + + G SS Sbjct: 259 IAQLDVTPPEASSKINVCFLENTDATEMAKVLDGVVKGITAQTTTLQAGTVSAQSSPFDS 318 Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 V ITAD+ +NSLV+ A + L VI +LD R QV V+ +I E+ +LGVQ Sbjct: 319 GKVTITADKASNSLVVMASPTDYNNLLQVIKKLDRRSKQVFVQVLIAEISPSKSRDLGVQ 378 Query: 369 WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG----------- 417 VGA + Y + GGI +D F+ + Sbjct: 379 SGAFAVGA----------------LGKYLQGGGI------YDPFNTFGSLLGSGSSTSPL 416 Query: 418 ---MAAGFFNGDWGV----LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS 470 +A N V +L AL S +IL+TP+I+T DNK A NVG++VP S S Sbjct: 417 STLIADKLKNTSKPVTGAAILQALESEGMLNILSTPNILTTDNKEAEINVGENVPFKSSS 476 Query: 471 -QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTR 529 Q+T G +VERK +G LK+ PQV+EGD + +++ QE+S+V S + R Sbjct: 477 TQSTFGTT--ESVERKDIGINLKIKPQVSEGDYIRMDLYQEISAVKSDKGDAVDLVTTKR 534 Query: 530 TIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFI 589 + + +V+VK ET+V+GGL+ D + KVPLLGDIP +G F+ T+ R K NL++ + Sbjct: 535 SAKTSVVVKDNETIVIGGLIQDTEDNTIQKVPLLGDIPGLGWFFKTTTKTRKKTNLLIML 594 Query: 590 RPTIIRDDDVYRSLS---KEKYTRYRQE-----QQQRIDGKSKALV--GSEDLP 633 P +++D S++ K K+T +E Q I GK+ V G E P Sbjct: 595 TPQVVKDARDLASITESQKGKFTEAAKEFGPLNVQNEISGKATKPVSQGQESRP 648 >UniRef50_A8ZWZ5 General secretion pathway protein D n=2 Tax=Desulfobacteraceae RepID=A8ZWZ5_DESOH Length = 799 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 190/619 (30%), Positives = 314/619 (50%), Gaps = 38/619 (6%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 +P A +FN+ D+ F++ + + GK ++D +V+ ++V S +E Y Sbjct: 71 LPTAADDGENLVSVDFNDVDLAVFIKFISEVTGKNFVLDQNVRTKVTVISPSKIPVEEAY 130 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSP---GMIADSSRPGVGDELVTRIVPLE 133 + F S+L++YG++ + + +KVV++ + ++ G++ + P D+LVT+I+PL Sbjct: 131 RVFESVLEVYGFATVEAGD-IIKVVKAGDARSKSIETGLVKEGRAPD--DKLVTQIIPLR 187 Query: 134 NVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ- 192 A ++ L ++ SV ++ Y +N+LILT S I +L+ ++ +DV G +Q Sbjct: 188 YADANEIKGLFTPLVSKDSV--LLAYPSTNMLILTDAYSNIQRLMRILDAIDVTGIGRQV 245 Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMP------ALLSAKIVADKRTNSLIISGPEK 246 +I LEYA A + IL + E+ + P ++VAD R N +I+ E Sbjct: 246 SVIPLEYADASKMVSILEVVFREAVDRGGPPQRGGTEPTDKIRLVADDRANVVIMLASES 305 Query: 247 ARQRITSLLKSLDVEESEEGNTR--VYYLKYAKATNLVEVLTGVSEKLKDEKGNARK--P 302 +I L+ LD ++ ++G R VYYLK A A L +VL + EK D +K P Sbjct: 306 ETVKIRKLITLLD-KKVQQGKERIHVYYLKNADAEELAKVLQMLPEKQGDATAEGKKLAP 364 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 S A++ ITAD TNSL+I A++ L +I +LDI R+ V +E +I EV Sbjct: 365 VLSKAIN---ITADASTNSLIIMAERDDYLVLKEIIEKLDIPRSMVYIECLIAEVNINKD 421 Query: 363 LNLGVQWANKNVGA---QQFTNTGLPIFNAAQGVADYKKN--GGITSANPAWDMFSAYNG 417 LG +W G+ + + G A+ + GG+ S M A + Sbjct: 422 FELGAEWLVGGKGSYDDKDGGYAVGFGGGSDTGYANVARMAMGGLPSGFSVGAM--AESI 479 Query: 418 MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN 477 + G + ++ A + IL+TP I+T DN+ A+ VG+++P L+ TTS + Sbjct: 480 VVGGIEYPNLAAVVRAFKKDKDVQILSTPQIMTTDNQEATITVGKNIPYLTKIGTTSSEE 539 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVL 536 ++ E K VG LK+ PQ+NE + L+IEQE++ +D + +L P R I V+ Sbjct: 540 TYSNYEYKDVGISLKIKPQINENRLIRLDIEQELTKLDQLTTVSLDRPATLKRGITTNVI 599 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 V T+V+GGL+DD KVP LGDIP +G LF+ S K NL+VF+ P +I+ Sbjct: 600 VHDEHTIVIGGLIDDSMSRVEYKVPCLGDIPFLGWLFKGLSRSSEKTNLLVFLTPHVIK- 658 Query: 597 DDVYRSLSKEKYTRYRQEQ 615 ++E Y+Q+Q Sbjct: 659 ------TAREADNIYQQKQ 671 >UniRef50_B7RHZ1 General secretion pathway protein D n=1 Tax=Roseobacter sp. GAI101 RepID=B7RHZ1_9RHOB Length = 644 Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 197/650 (30%), Positives = 329/650 (50%), Gaps = 65/650 (10%) Query: 12 LAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFS 71 + AL+ P A+ E + N ADI E V + G+T+++DP++ G ++V S + Sbjct: 16 VTALVRPHVAQAQ-ETFVINLRGADISLLAEQVSEITGRTLVLDPNLTGDVTVVSQQSLD 74 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRS--ANVKTSPGMIADSSRPGVGDELVTRI 129 + + F SIL + G++ + ++V A K SP I PG D +VTR+ Sbjct: 75 SEGVWALFQSILRVRGFAAVE-TGAVWQIVPELDARTKGSPQKI---DTPGSQD-VVTRL 129 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 + L +P+ + +LR ++D G + E N +++T + +++++ + D Sbjct: 130 LRLNRLPSAEAVRVLRPLID--EAGYIEAIEDPNAIVVTDTLANVDRIVAIATTFDGEAE 187 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 + ++I YA A +A +++++ PA A++ D +N L++ G ++ Sbjct: 188 MEAEVIRFTYAEAGTVATAISEVLG--------PAGTGARLSVDVSSNVLLVRGTQRDIS 239 Query: 250 RITSLLKSLD----VEESEEGNTRVYYLKYAKATNLVEV----LTG-------VSEKLKD 294 +I SL +++D V +SE +T +Y L++ +AT + ++ LTG V+ L + Sbjct: 240 QIRSLARAMDTSPRVAQSETVSTSIYRLQFGEATIVADLVRNTLTGSTDLTNPVAASLGE 299 Query: 295 EKGNARKPSSSGAMDN-----VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 + N S D V++ A +TNS+++ Q +++ +I LD+RR QV+ Sbjct: 300 DPANPDAQSFGSGPDAAPISPVSVQASIETNSVIVRGTQRQLAEVSQLIKALDVRRPQVM 359 Query: 350 VEAIIVEVQDGNGLNLGVQWA------NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT 403 +EA IVEV LGVQ ++ A F N G + N VA + N Sbjct: 360 IEAAIVEVSGDVAERLGVQLGIGENTETGSIAATSFGNGGGSLQNVL--VALGQSNAAAL 417 Query: 404 SANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 S G++ G + +G L+ AL ++ ++L+TPS+ T+DN+ A+ VGQ+ Sbjct: 418 S-----------TGLSVGLASDSFGALIQALNTSTSANLLSTPSVTTMDNQSATIVVGQN 466 Query: 464 VPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG 523 VP +G TT G NV +ER+ VG + V P++ G V LEIEQEVSS+ + + + Sbjct: 467 VPFRTGRLTTDGGNVAEVIEREDVGITMVVKPRITAGGVVQLEIEQEVSSLTNQAVTGAA 526 Query: 524 PTF-NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 N R I VL + G TVVLGGL+ D + KVPLLGD+P++G LF+ + R+K Sbjct: 527 DLVTNRRVINTTVLAENGGTVVLGGLITDDRLQNNQKVPLLGDVPVLGNLFKSRNNSRSK 586 Query: 583 RNLMVFIRPTII--RDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSE 630 R L VF+RPTI+ R D L K TRYR+ Q + ++L+ E Sbjct: 587 RTLFVFLRPTIMLTRAD-----LEKAAETRYRRAQNAEATVQPRSLLKHE 631 >UniRef50_C8PXJ4 General secretion pathway protein D n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PXJ4_9GAMM Length = 813 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 202/671 (30%), Positives = 327/671 (48%), Gaps = 90/671 (13%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 A HA Y + +ADI+ F++ + K ++DP + G ++V SN S+QE Y F Sbjct: 29 AAHAATG-YKVHLQDADIKAFIDQIATITQKNFVLDPRINGNVTVISNKPLSRQEVYDLF 87 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 L+++ + G ++ +D G + V G+ D G ++ TRI L N A D Sbjct: 88 LAVMKVNG--IVAIDRGLTTELVPDTVAKQAGVDVDLRGNTAGSQMATRIYYLTNTNAND 145 Query: 140 LAPLLRQMM----DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII 195 + ++R MM +A V NV N +IL+ RA ++N+ ++I +D +K II Sbjct: 146 ILNVIRPMMPPYANAAVVPNV------NAIILSDRADSLNQYAKLISDLDSNMNDKLTII 199 Query: 196 HLEYASAEDLAEILNQLIS-------ESHGKSQMPALLSA-----KIVADKRTNSLIISG 243 L + A+ + ++L+ L + G+S A+ S I+AD ++ L++ G Sbjct: 200 PLRHVDAKRMMDLLSSLTGTGSGTAPAATGQSGQAAVASTGGSLINIIADPISDRLLVKG 259 Query: 244 PEKARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGV--------SEKLKD 294 + ++ +++ LD ++ RV+ LKYA AT++ E+L G+ S Sbjct: 260 SAEMTAKVQRMVEQLDTVPTQRLSGLRVFRLKYASATHIAEMLRGLLAYQSINSSGDQTT 319 Query: 295 EKGNARKPSSSGAMDNVAIT-------------------------------------ADE 317 + ++ S+S +N A+T AD+ Sbjct: 320 LQASSMFQSASNTSNNSALTTSNTAASPTGSPLNTSSTSNTTTTQNNGYQGRPFSIIADQ 379 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW----ANKN 373 NS+++ A+ + ++ I LD RR QVL++A I+E+ + LGVQW AN Sbjct: 380 TQNSVIVNANPELMVEIENAINELDTRRDQVLIQAAIMEISGNDTQQLGVQWAMGNANSG 439 Query: 374 VGAQQFTNTGLPIFNAAQGVAD--YKKNGGITSANPAWDMFSAYNGMAAGFFNGD---WG 428 VG F N G +A G+A K G +A+ A + G + NG+ +G Sbjct: 440 VGVINFNNIGA----SAVGLASEILSKTPGTAAASVAGALLGI--GTSKTDSNGNREFYG 493 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV---FNTVERK 485 +L A+ N ++L+ PSI+TLDN+ A+ VGQ+VP ++GS TT+ ++ F TV R+ Sbjct: 494 AILQAINKTNNANLLSMPSILTLDNEKANILVGQNVPFVTGSYTTASNSSTTPFQTVSRQ 553 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSS-VDSSSNSTLGPTFNTRTIQNAVLVKTGETVV 544 VG L V P + + +V LEI QEVSS VD + N+ G N I+ +L +TV Sbjct: 554 DVGINLNVIPHIGDNGSVRLEISQEVSSIVDGTLNNVSGVVTNKNLIKTTILADDQQTVA 613 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 LGGL+ D S KVP LGD P++G LFR S K NL+VF++PTI+R+ S++ Sbjct: 614 LGGLMRDNSTYGQQKVPGLGDAPILGNLFRSKSKNSDKTNLIVFLQPTILRNGSAVASVT 673 Query: 605 KEKYTRYRQEQ 615 ++ R Q Sbjct: 674 EKSLDGIRTMQ 684 >UniRef50_D0XKD9 General secretion pathway protein D n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XKD9_9CAUL Length = 688 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 192/649 (29%), Positives = 321/649 (49%), Gaps = 89/649 (13%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 N ADI+ E V + G+T+++DP VQG ++V S + S+ ++ FLS+L G++ Sbjct: 49 NMRGADIKDVAEQVSRITGRTLVLDPQVQGQVNVVSAEPLSRNGVWELFLSVLRTSGFAA 108 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVG---DELVTRIVPLENVPARDLAPLLRQM 147 + N ++V A V S +S G +++TR++ L N+P+ LR + Sbjct: 109 VRSGN-VWRIVPQATVVQS-----GASETGAAVSNQQIITRLIRLRNLPSDQAVRALRPL 162 Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAE 207 + S G + N +++T A I ++ ++ +D G + I L YA+A ++A Sbjct: 163 VS--SFGAIEPITEPNGVVVTDYAENIRRVQQLASTLDSGGGSSFESIALRYANAGEVAT 220 Query: 208 ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGN 267 + L+ G ++ AD+R+N L+I G + S++ +LD Sbjct: 221 SVGALLGSDAG--------GPRVTADERSNVLLIRGDAADLAQARSIVAALDTPGGATPV 272 Query: 268 TRVYYLKYAKATNLVEVLTG-----------VSEKLKDEKGNA----------------- 299 TRV L+ + A ++ E++ G V+ L+ + G A Sbjct: 273 TRVVRLRNSDAESITEIVRGLLGGEPSATNPVARSLRQDTGLASLSANNRDVAAQAASAI 332 Query: 300 ----------------RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDI 343 R P++S ++ V + A + N++V+ + E L +I++LD+ Sbjct: 333 SSSGEGAATSLPSSAPRSPAASFTLEGVTVQASPELNAVVMRGPPATVEMLQDLISQLDL 392 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWA-------NKNVGAQQFTNTGLPIFNAAQGVADY 396 RRAQV +E IVE+ G +GVQ + +G F+N G +D Sbjct: 393 RRAQVKIEVAIVEITGELGEQIGVQLGLGGAVPDDGVIGGTSFSNGG----------SDL 442 Query: 397 KKNGGITSA--NPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNK 454 G + SA PA + +AAG G++G+LL AL +N+ ++L++PS+ LDN+ Sbjct: 443 ---GTVLSALGYPAGRLLGQGLSLAAGS-EGEFGLLLQALGTNSAANLLSSPSVTVLDNQ 498 Query: 455 LASFNVGQDVPVLSGSQTTSGD--NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 A VGQ+VP +GS T G+ N F T+ R+ VG L+V P+V+EGD V L++ QEVS Sbjct: 499 PAEIVVGQNVPFRTGSFATDGNSTNPFTTISREDVGLTLRVIPRVHEGDVVKLDVSQEVS 558 Query: 513 SVDSSSNSTLGPTF-NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 S+ +++ + N R+IQ +VL GET+VLGGL+ D S+VP L +P+VG Sbjct: 559 SLVTTNITGAADLITNRRSIQTSVLANDGETIVLGGLVTDDRMSNNSRVPGLSSLPVVGN 618 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRID 620 FR + +R L +F++PTI+R DD + ++E + R R + RID Sbjct: 619 AFRSRRDSQTRRTLFIFLKPTILRTDDDVAASARESFDRLRANEPVRID 667 >UniRef50_A3VSK1 General secretion pathway protein D n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSK1_9PROT Length = 736 Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 194/663 (29%), Positives = 322/663 (48%), Gaps = 69/663 (10%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS--NDTFSQQEYYQFFL 80 A+ Y N+ AD+ Q + V G+ +IDP V G +++ S S E + FL Sbjct: 34 AQQGAYQLNYEGADLAQVAQDVAFQTGRVFVIDPRVSGRVNIVSPPGSALSSDEVWAVFL 93 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDL 140 + L + G++ + + K++ + ++ VTR+VPL+ VPA Sbjct: 94 ATLQVNGFAAVPIGEREYKIIPANQASRDGAAAGSAAV----GTTVTRVVPLQFVPAGTA 149 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLE 198 A LR + AG V SN LI+ + +++L+ V+ R+DV +K + I L+ Sbjct: 150 AANLRAL--AGENSLVTPIVESNSLIIVDTPNNVSRLLSVVDRIDV---DKSVVRSIPLD 204 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSL 258 A+A ++A L+++++ G+ + S IVA +NS+++ G + R+ +++ L Sbjct: 205 NAAASEVAATLSEIVNRPGGQGSRQS--SVSIVAVDASNSVVLRGEPEEISRLVPIIREL 262 Query: 259 DVEESEEGNTRVYYLKYAKATNLVEVLTG-----VSEKLKDEKGNARKPSSSGAMDNV-- 311 D + YL +A +V ++ ++ + E R ++ N Sbjct: 263 DSPSRSQVALDTIYLNHANGAQIVPLIQALLNEPITVAVSGEDDEGRVTTTQSGRQNSGP 322 Query: 312 ---AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 +I TNSLVI A Q + +++RLDIRR QVL+EA+IVE+ D LGVQ Sbjct: 323 RASSIAFHAPTNSLVIKAPPETQRLIRGIVSRLDIRRPQVLIEAVIVEIADTTARELGVQ 382 Query: 369 WANKNVG----AQQFTNTGLPIFNAAQG---------------VADYKKNGGIT-SANPA 408 + + G A F++T + +AA + NG +T + + Sbjct: 383 YVSGGAGLPLSAASFSSTRPNVVSAAGAALFLNEQDDNDNVTTITTTSANGDVTVTEGQS 442 Query: 409 WDMFSAYNGMAAGF----------FNG-------------DWGVLLTALASNNKNDILAT 445 +D +A FNG +GVLL+AL S++++++L Sbjct: 443 YDANDPDLAIAGQLVEAAVQELLNFNGFLFGAGGETGDGGVYGVLLSALQSDSQSNVLQV 502 Query: 446 PSIVTLDNKLASFNVGQDVPVLSGSQTTSG-DNVFNTVERKTVGTKLKVTPQVNEGDAVL 504 PSIV LDN+ + VGQ+VPV++G S F +ERK +G L+V PQ+ G+ V Sbjct: 503 PSIVLLDNEEGTIQVGQEVPVVTGEAVGSDFQGGFRQIERKNIGNILQVKPQITAGNTVQ 562 Query: 505 LEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLG 564 L++ EVSS+ + + GP N + V + G+T+VLGGL+D ++ SKVP+LG Sbjct: 563 LKLNLEVSSLGAFAPDAQGPITNESILDLTVSAEDGQTLVLGGLVDKDRRQTESKVPVLG 622 Query: 565 DIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSK 624 DIPL+G LF+ + + LM+FIRPTI+RD S++ KY RQ+Q +R+ + Sbjct: 623 DIPLLGNLFKGQAQSDQESTLMIFIRPTILRDAQAADSVTARKYDYVRQQQMRRLREGQR 682 Query: 625 ALV 627 L+ Sbjct: 683 PLL 685 >UniRef50_Q48JN3 General secretion pathway protein GspD n=2 Tax=Pseudomonas syringae group genomosp. 2 RepID=Q48JN3_PSE14 Length = 778 Score = 254 bits (649), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 196/653 (30%), Positives = 315/653 (48%), Gaps = 89/653 (13%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 NF ADI+ V + + G+ L+DP V GT+++ S + + Y+ ++ L + G+SV Sbjct: 100 NFVEADIQSVVRALSRSTGQQFLLDPKVTGTLTLVSEGSVPASQAYEMLMAALRMQGFSV 159 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA 150 + + G VV + + G + + +P G+ ++TR L+ A +L P+LR ++ Sbjct: 160 VDV-GGVAHVVPEDDARLLGGPVYSADKPS-GNGMLTRTFRLQYENAVNLIPVLRPIVSP 217 Query: 151 GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILN 210 + N Y +N +++T A + ++ ++I +D ++ + A D+A +++ Sbjct: 218 NNPINA--YPGNNTIVVTDYADNLVRVAQIIDGIDTPSAIDTDVVTVHNGIAVDIASMVS 275 Query: 211 QLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT-SLLKSLDVEESEEGNTR 269 +L+ G A ++ D R+N++II R + +L+ LD +S N Sbjct: 276 ELLDTQGGD----ATQKISVIGDPRSNAIIIRAGSPERTELARNLIYKLDNAQSNPSNLH 331 Query: 270 VYYLKYAKATNLVEVL---------TGVSEKLK-------------DEKGNA------RK 301 V YL+ A+A L + L +G S+ + D +GN+ R Sbjct: 332 VVYLRNAQAGKLAQALRGLLTGESDSGASDTTRAMLSGMGSTGNKNDVQGNSSAGPVSRT 391 Query: 302 PSSSG------------------------AMDNVAITADEQTNSLVITADQSVQEKLATV 337 + SG + V I AD TN+L+I+A + + L V Sbjct: 392 VAGSGYGQSSASPSVATAGSQQAEQNTAFSAAGVTIQADATTNTLLISAPEPLYRNLREV 451 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 I +LD RRAQV++E++IVEV + + GVQW N+ G F Sbjct: 452 IDQLDQRRAQVVIESLIVEVSEDDANQFGVQWQTGNL-------NGSGGFGGVNLGGSGL 504 Query: 398 KNGGITSANPAWDMFSAYNGMAAGFFNG-----------DWGVLLTALASNNKNDILATP 446 GG TS D+ G+ G G D VL AL S +++L+TP Sbjct: 505 NTGGSTSI----DVLP--TGLNVGVVRGAVTIPGIGEVLDLKVLARALKSKGGSNVLSTP 558 Query: 447 SIVTLDNKLASFNVGQDVPVLSGSQTTSG----DNVFNTVERKTVGTKLKVTPQVNEGDA 502 +++TLDN+ AS VGQ +P ++GS T G +N F TV+R+ VG KL V PQ++EG Sbjct: 559 NLLTLDNEAASIFVGQTIPFVTGSYVTGGGGTSNNPFQTVQREEVGLKLNVRPQISEGGT 618 Query: 503 VLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPL 562 V L+I QEVS+VD ++ G N R I ++L+ G+ +VLGGLL D + VP Sbjct: 619 VKLDIYQEVSNVDQRASLASGTVTNKRAIDTSILLDDGQIMVLGGLLQDGYNQSDEAVPW 678 Query: 563 LGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 L IPL+G LFR + +K NLMVF+RP IIRD R+++ +Y R+ Q Sbjct: 679 LSRIPLLGVLFRNEARSTSKTNLMVFLRPYIIRDSGTGRNITLNRYEFMRRAQ 731 >UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V9I3_SPHWW Length = 682 Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 184/678 (27%), Positives = 322/678 (47%), Gaps = 96/678 (14%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 L+ + +A + G ++ N DI E + + G+T+++DP+V+GT++ Sbjct: 9 LSALVAAAMAGTPILAQGASQAADVVVNMRAVDIADVAEQISRITGRTLILDPAVKGTVN 68 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG--V 121 V S + S + F S+L ++G++ + K RS + I D+ G Sbjct: 69 VTSAEPLSVDGVWDLFQSVLRVHGFAAV-------KSGRSWRIIPQASAIRDAGSGGRLS 121 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 G ++ TR+V L+NV A + R ++ G++ N +I+T A + ++ + Sbjct: 122 GQDVTTRMVRLQNVSGEQAARVFRPLV--AQFGSIEAMASPNAIIVTDYAENVRRIESLA 179 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 + +D G + I L YA+A+D+A + ++ + A ++VAD+R+N +++ Sbjct: 180 RALDSGGGGRFDSITLRYANAKDVAAAIQGVMGDGT------ATGGPRVVADERSNIVLV 233 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN--- 298 G L ++D + TR+ L A E +T V + + E+G Sbjct: 234 RGEPAMVSEARRLAHTIDKPGAGVPITRMIRLNNGDA----ESVTEVLQGVLGEQGTVTN 289 Query: 299 -------------ARKPSSSGAM------------------------------------- 308 R+ S++GA Sbjct: 290 PAARAVAGGRARITRQQSNAGAQAAGLSLGSTPATLGGGLADAASPGAGGSGGDATPKGF 349 Query: 309 --DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 ++ + + N++V+ + ++ +IA+LD+RR QVL+EA IVE+ L Sbjct: 350 STPDLTVQPAPELNAIVLRGTPAAIAEVEPLIAQLDVRRPQVLIEAAIVEISGDQAEQLA 409 Query: 367 VQWA-------NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMA 419 VQ + GA FT+ GLP+ + + +PA + G A Sbjct: 410 VQLGIGAAAINRASGGATSFTSPGLPLQSILTAIG-----------SPAAGAVLSNGGSA 458 Query: 420 AGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--N 477 F ++ +LL A+ + ++++L+TPS+ TLDN+ A VGQ+VP +GS +T G+ N Sbjct: 459 NIRFGDNFSILLQAIGQSTRSNLLSTPSLTTLDNEPAEIVVGQNVPFRTGSFSTDGNTIN 518 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLV 537 F T+ER+ VG L+V P++++G+ V LE+ QEVSS+ ++ N R+IQ +VL Sbjct: 519 PFTTIERQDVGLTLRVVPRIHQGNVVRLEVAQEVSSLTNAVTGAADLITNRRSIQTSVLA 578 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 G+T+VLGGL+ D + S+VP+LGDIP+ G+LFR KR L VF++PTI+RD Sbjct: 579 DDGQTIVLGGLISDDRTQTRSQVPILGDIPIAGELFRSRKESHVKRTLFVFLKPTILRDR 638 Query: 598 DVYRSLSKEKYTRYRQEQ 615 + S+++ KY R R ++ Sbjct: 639 EAANSVTQAKYARTRYDE 656 >UniRef50_Q4UYQ6 Type II secretion system protein D n=6 Tax=Proteobacteria RepID=Q4UYQ6_XANC8 Length = 690 Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 192/625 (30%), Positives = 312/625 (49%), Gaps = 58/625 (9%) Query: 32 FNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVI 91 + D+R F++ V + G T ++D VQG+++V S+ + L++L G + Sbjct: 36 MQDVDLRAFIQDVSRATGITFIVDTRVQGSVNVARAQAMSEADLLGMLLAVLRANGLIAV 95 Query: 92 TLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAG 151 + +++ PG A + +G T++ L+ V AR A +L+ ++ G Sbjct: 96 SSGPSTYRIIPDDTAAQQPGSAASGN---LG--FATQVFTLQRVDARSAAEILKPLVGRG 150 Query: 152 SVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAEDLAEIL 209 V ++ N L++ A + ++ ++ ++D T++ I + L +SA++LA L Sbjct: 151 GV--IMAMPQGNSLLIADYADNLRRIRGLVAQID---TDRAAIDTVTLRNSSAQELARTL 205 Query: 210 NQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTR 269 L ++ +S A+LS ++ + +NSLI+ G QR+ LD G+ Sbjct: 206 TTLFGQAGERS---AVLS--VLPVESSNSLIVRGDPALVQRVVRTALDLDGRAERRGDVS 260 Query: 270 VYYLKYAKATNLVEVL---TGVSEKLKDEKGNARKPSS----------------SGAMDN 310 V L++A A L+ VL G + + E G +P++ A Sbjct: 261 VVRLQHASAEQLLPVLQQLVGQTPGNEAEPGQETRPTAVDVAASAGAAQAQVIAPAAGKR 320 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW- 369 I +N+L+I AD Q L VI +LD+ R QVLVEAI+VE+ D LGVQ Sbjct: 321 PVIVRYPGSNALIINADPETQRALMDVIRQLDVHREQVLVEAIVVEISDTAAKRLGVQLL 380 Query: 370 -ANKN----VGAQQFTNTGLPIFNAAQGVADYKKNGGI----------TSANPAWDMFSA 414 A +N + A Q++ I A A + N G +A + Sbjct: 381 LAGRNGTVPLLATQYSGAAPGIVPLAAAAAGTRSNNGEDDSVLEQARNVAAQSLLGLSGG 440 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT-T 473 G+A + +G+++ A+ S+ +++L+TPSI+TLDN+ A VGQ+VP+ +G Sbjct: 441 LIGLAGQSNDAVFGMIIDAVKSDTGSNLLSTPSIMTLDNEQARILVGQEVPITTGEVLGA 500 Query: 474 SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD---SSSNSTLGPTFNTRT 530 + DN F T++R+ VG +L+V PQ+N + L I+QEVS++ S+ +S L FN R Sbjct: 501 ANDNPFRTIQRQDVGVELEVRPQINTAGGITLAIKQEVSAIAGPVSTQSSEL--VFNKRQ 558 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 I+ V+V+ G V LGGLLD ++ V KVPLLGD+P +G LFR+ S R K NLMVFIR Sbjct: 559 IETRVVVENGAIVALGGLLDQNDRQTVEKVPLLGDVPGLGALFRHKSRNRDKTNLMVFIR 618 Query: 591 PTIIRDDDVYRSLSKEKYTRYRQEQ 615 PTIIRD + ++ +Y R Q Sbjct: 619 PTIIRDAADAQRMTAPRYNYLRDRQ 643 >UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C127_HYPNA Length = 653 Score = 248 bits (633), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 192/611 (31%), Positives = 313/611 (51%), Gaps = 34/611 (5%) Query: 26 EQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQ-GTISVRSNDTFSQQEYYQFFLSILD 84 +++ N + ++ +E + G T + P V+ +SV S + E +Q FL+ L Sbjct: 29 DKHVLNLEDVELNTLIEDISMLTGYTFITHPDVRRAKVSVISQTPMTTTELFQVFLTTLR 88 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 + G++ + ++V A T M S PG + VT ++ L+ A + A ++ Sbjct: 89 IQGFAAVPAGKDTYRIVPRAIASTEAPM----SGPG-PNAFVTEVIKLDRANAMEAAQMI 143 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 + ++DA G VV +N L++ AS + ++ +I+ +D T + + L A + Sbjct: 144 KPLLDAQ--GQVVANAGTNTLVVVDYASNLERVRRIIETLDRDQT-VTETVPLTNVPAVE 200 Query: 205 LAEILNQLISE-SHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES 263 + +L +L + S + Q P+ LSA VA +NS+I+ G + +R + LD Sbjct: 201 IETVLTRLQGDPSAQQGQAPSRLSA--VASLTSNSIILRGDATSVERAKRVALELDATNP 258 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV 323 + + RV L YA A +V +L E++ + R PS + + I TNSL+ Sbjct: 259 QRDHVRVITLNYADAEEVVPIL----ERVANSMAMQRAPSETAPVAQT-IAHHGPTNSLI 313 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ-QFTNT 382 I+A+ + V+ LD+RR QV+VEAIIVE+ D LG+Q+ G F +T Sbjct: 314 ISANPETILAMERVVTALDVRRPQVMVEAIIVEMSDDAARELGLQFLLAGTGGDVPFAST 373 Query: 383 GL----PIFNAAQGVADYKKNGGITSANP----AWDMFSAYNGMAAGF--FNGD--WGVL 430 P A G + NP A + +G+ GF +GD +GV+ Sbjct: 374 NFSRAAPNLLALTGALVTDAFEDPAAENPFREAAISSLTGSSGLTLGFGGTSGDNLFGVI 433 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-NVFNTVERKTVGT 489 L A+ + + IL+TP +TL+N ++ VGQ++PV +G + N F TVERK +G Sbjct: 434 LNAVEDDTASRILSTPFGMTLNNATSALIVGQEIPVTTGQVLGEANSNPFRTVERKDIGI 493 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGP--TFNTRTIQNAVLVKTGETVVLGG 547 +L+VTP++ E D V L+I QEVSSV S T+ P + R I+ +VL GE +VLGG Sbjct: 494 QLEVTPRIGENDTVRLDIRQEVSSVFGSVG-TVTPDLILDKREIRASVLADDGEIIVLGG 552 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 L++ + +KVP+LGDIP VG+LFR +RNLMVFIRPTI+R+ ++++++K Sbjct: 553 LVEQTDTLRDTKVPVLGDIPGVGRLFRSEGKAATRRNLMVFIRPTIVRNKADAQAVTQQK 612 Query: 608 YTRYRQEQQQR 618 Y + E+ R Sbjct: 613 YLYVQAEELMR 623 >UniRef50_Q1D9E0 General secretion pathway protein D n=2 Tax=Cystobacterineae RepID=Q1D9E0_MYXXD Length = 863 Score = 245 bits (625), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 193/688 (28%), Positives = 328/688 (47%), Gaps = 102/688 (14%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT----FSQQE 74 C N +YG F+ +I + V+ V +T ++ +V+G IS+ + + Sbjct: 59 CEEARRNARYGIYFDKVEIEKLVQTVADATCRTFILPENVRGKISIIGPENGRVEVNADA 118 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVV--RSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 +Y FL+ LD G + F+K+V RSA P ++ + +++VT++ + Sbjct: 119 FYSAFLAALDANGLAAYQYGR-FMKIVDKRSAKQNPIPTIVEEGEPYTTNEQMVTKLFRV 177 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV-IGTEK 191 +NV L +L+Q++ G+ + Y P + +I+ S I++L +I ++D +++ Sbjct: 178 QNVEVEPLRGVLQQLVSKD--GDTIPY-PPDTIIINDVGSNIHRLERIIHQLDTRAASDE 234 Query: 192 QQIIHLEYASAEDLAEILNQLISESHGKSQMPALLS------------------------ 227 +II ++YASA+D+A + +L + PA Sbjct: 235 MRIIQVQYASAQDVANTVQRLFEAKGARPGQPAAAGRNVPPAAAQATPQAGQGQEGATGG 294 Query: 228 ----AKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVE 283 ++I+ D+RTN LII A +RI ++ +D+ S G VYYL+ A A L Sbjct: 295 PVTLSQIIPDERTNKLIIVASPAAFERIQDIVGQIDIPTSGGGRINVYYLENANAEELAS 354 Query: 284 VLTGVSEKLKD-EKGN----ARKPSSSGAM----------DNVAITADEQTNSLVITADQ 328 L +++ + +G AR P + G V I+AD+ +NSLVI A Sbjct: 355 TLQSLAQGTGNAPRGRTPVPARPPGAPGGPTTTQAAELFSGEVKISADKGSNSLVIVASS 414 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFN 388 + + + VI +LD R QV VEA+I+EV LG+ N + G T+ G + Sbjct: 415 ADYKNIVQVIQQLDKPRRQVFVEAVIMEVNLDRNARLGM---NLHSGFSLSTSNG----D 467 Query: 389 AAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG-----------DWGVLLTALASN 437 G+ +G + + ++Y G AG +GV+L A+ + Sbjct: 468 QVPGLIGTNTSGQGLPPSLSLTSLASYGGFLAGIQGPVIPALEKLGIPAFGVVLHAMQQS 527 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV------------------- 478 + ++L+TP I+T DN+ A VGQ+VP SG TS ++ Sbjct: 528 SDVNVLSTPHILTSDNEEAEITVGQNVPFQSGFNPTSLGSLGAGVGGGAGALGGGLLGGL 587 Query: 479 ------FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQ 532 + + R+ V KL V PQ+NE D + L I Q+ + +S++ LGPT + R+ + Sbjct: 588 GGLGSLYAPITRQNVELKLTVKPQINESDYIRLVINQQTEEI-ASTDPVLGPTTSRRSAK 646 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 V+ + ET+V+GG++ D + E VSKVPLLGDIPL+G LFR T+ + K NL++F+ P Sbjct: 647 TTVIARDQETLVIGGIMQDRTLESVSKVPLLGDIPLLGHLFRDTTRRKTKTNLLLFLTPY 706 Query: 593 IIRDDDVYRSLSKEKYTRYRQEQQQRID 620 IIR + +R + + R +E+QQ ++ Sbjct: 707 IIRGPEDFRVI----FERKMKERQQFVE 730 >UniRef50_A3W186 General secretion pathway protein D n=1 Tax=Roseovarius sp. 217 RepID=A3W186_9RHOB Length = 648 Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 173/590 (29%), Positives = 297/590 (50%), Gaps = 42/590 (7%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 Q + +A +R FV+IV Q G+ ++D VQG+++V + + S Y+ FL++L+L Sbjct: 24 QVSLDLRDASLRDFVQIVAQSTGRNFILDERVQGSVTVVAPNQVSPSAIYEIFLNVLELN 83 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 +++ V + +PG +R +G + TR+ P+ N ++A ++R Sbjct: 84 RLTIVEGAETDRIVPIDLARELAPG----DARARLGGDFETRVFPVRNSSVDEIAEVIRP 139 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLA 206 ++ A +V + V S ++IL+ R ++++++ R+D + I L A ++ Sbjct: 140 LLPAEAVLSTVPE--SGLMILSDRRENFQRIVQLVDRLDTPSRNSIETIPLRNGKAAEML 197 Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEG 266 ++ L G S + AD R+N+LI+SG + R R+ ++ LD + Sbjct: 198 SVITALAITPQGSS---------LSADPRSNALIVSGTPEFRDRVRDVVSELDRPQRSIA 248 Query: 267 NTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITA 326 T V +L YA AT+L +V + + + + + + + I A+EQ N+L+ITA Sbjct: 249 -TEVVHLNYANATDLADV---IRQSFGAPEASTEGAAPTAVPGGITIVAEEQQNALIITA 304 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN----KNVGAQQFTNT 382 + + LD R QVL+EA+I E+ + +L Q+ VG +F Sbjct: 305 PTDRIASITGAVRGLDQRPDQVLIEAVIFELSVESFSDLSFQFGGVIDGATVGGVEFALQ 364 Query: 383 GLPIFNA--AQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKN 440 G P + + +A GG T G A F G L ALAS + Sbjct: 365 GRPTLTSLVSTVLAGNAPTGGGT------------GGSIAAFDKSGIGGFLAALASKSST 412 Query: 441 DILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV-----FNTVERKTVGTKLKVTP 495 +L+TPSI+TL+N+ A V Q+VP ++GS +T GD+ F T++R+ VG L VTP Sbjct: 413 KLLSTPSILTLNNREAEIVVAQNVPFVTGSFSTVGDSAVPNQPFQTIQRQDVGLTLTVTP 472 Query: 496 QVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 Q+ V LEI QEVS++ +++++ G + R + VLV+ G ++LGGLL++ S Sbjct: 473 QITRDKTVRLEINQEVSNLTNAASAAGGEITSKRELSTNVLVRDGHVIMLGGLLENGSGS 532 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 +VP L ++PL+G+LF+ S +R L+V +RP I+ D+ R L+K Sbjct: 533 VNQRVPGLSELPLLGRLFKGRSVNENQRILLVMLRPRILSSDEEARELTK 582 >UniRef50_Q2G4Y4 Type II and III secretion system protein n=3 Tax=Sphingomonadaceae RepID=Q2G4Y4_NOVAD Length = 748 Score = 241 bits (616), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 197/668 (29%), Positives = 313/668 (46%), Gaps = 89/668 (13%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 QY N ADIR FV + G+T ++D VQ ISV S+ S+ EY++ FLS L Sbjct: 29 QYTLNVREADIRAFVADAAEVTGRTFIVDSRVQAKISVVSDRPLSRSEYFEVFLSTLRAN 88 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 G + NG ++ + T+P I SR ++VT +V L + A LR Sbjct: 89 GLVAVPTGNGAFRIQPAEGAATNPTRIG--SRGAAQSQMVTEVVRLRTIDAAQAVETLRP 146 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLA 206 ++ G + + N L++ A + ++ ++ +D T Q +I LE+A A ++A Sbjct: 147 LVS--KEGAITANKAGNSLVIVDYADNLRRIRALLGDIDRDSTTTQTVI-LEHAGAREIA 203 Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEG 266 L QL+ G AL A +VA N++++ G R++++ + LD + + G Sbjct: 204 TALTQLVP--AGAEGARAL--ATVVAVDSANAVLMRGDGSTLSRLSAMARQLDAKAALGG 259 Query: 267 NTRVYYLKYAKATNLVEVL-----------------------------------TGVSEK 291 +V +L YA + LV VL G + + Sbjct: 260 EIKVVWLDYADSAALVPVLERLIGGQGGGEVASASAAPISLGGVGSNATSTAGTQGSTGQ 319 Query: 292 LKDEKGNARKP--SSSGAMDNVAITADEQTNSLVIT-----------ADQSVQEKLATVI 338 G++ P ++SG + N I + IT A Q +L+ +I Sbjct: 320 AASTGGSSTSPIGATSGGLGNGPIKLANGRGTATITRYPGANAIIIAAPADEQRRLSELI 379 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ--WANKNV--GAQQFTNTGLPIFNAAQGVA 394 +LD+ + QVLVEAIIVE+ + LGVQ + KN+ ++N+ I + A G+ Sbjct: 380 RQLDLPQEQVLVEAIIVEISNDVAKELGVQMLFGGKNMPFAVTNYSNSSPNIIDIAGGLL 439 Query: 395 DYKKN-------------------GGITSANPAWDMFSAYNGMAAGFF-----NGDWGVL 430 N G + N A + SA G GF + G + Sbjct: 440 ADNLNQTTTVVNGDTVTTTTNSTAGDLLRENAASKLLSA-RGAYTGFLTELSKDTYLGAI 498 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--NVFNTVERKTVG 488 + A+ ++ ++IL+TP I T +N AS GQ++PV +G + G+ + F T++R+ VG Sbjct: 499 INAVQTDKNSNILSTPHITTNNNVPASILFGQEIPVSTGEALSGGNFSDTFRTIQRQNVG 558 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF-NTRTIQNAVLVKTGETVVLGG 547 +L VTPQ+N + + L++ QEVSS+ + + T N R I+ V V E V LGG Sbjct: 559 IELDVTPQINASNMIRLDLRQEVSSIAGTVSKTSNELIVNKREIKTTVTVGDREIVALGG 618 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 LLDD + + KVPLLGDIP++G+ F+ + R K NLMVFIRPTI+R+ ++L+ + Sbjct: 619 LLDDNEQRTLQKVPLLGDIPILGEAFKSRARSRVKTNLMVFIRPTILRNAADRQALAARR 678 Query: 608 YTRYRQEQ 615 Y R Q Sbjct: 679 YGVVRDAQ 686 >UniRef50_C5CPK3 General secretion pathway protein D n=1 Tax=Variovorax paradoxus S110 RepID=C5CPK3_VARPS Length = 774 Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 220/715 (30%), Positives = 343/715 (47%), Gaps = 113/715 (15%) Query: 9 CCLLAALLMPCAGHA--ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 L AA + +G A E NF NADI + G+ +++DP V+GT+++ + Sbjct: 26 TLLQAAPVFAQSGDAPRRGEPITLNFANADIEAVARTMAVVTGRDVVVDPRVKGTMNLVT 85 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG---- 122 + + + F S L L G++V+ + G KVV A+ K + +++ P G Sbjct: 86 DRAIAPAAAFNQFASALRLQGFAVVEAE-GLYKVVPEADAKLQTQTV-NTATPSAGSVAG 143 Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEP-SNVLILTGRASTINKLIEVI 181 +++VT+I L L P+LR ++ N ++ P +N L++T A + +L +I Sbjct: 144 NQIVTQIFRLNYESPNSLLPVLRPLIPPN---NTINVNPGNNSLVITDYADNMRRLARII 200 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMP---------ALLSAKIVA 232 +DV ++I L+++ A D+ ++ +L+ + G P A ++A Sbjct: 201 AALDVPNASDIEVIPLKHSIATDMLPLITRLV-DGSGSGATPGAPAPGVADASFRTTLLA 259 Query: 233 DKRTNSLIISGPEKARQR-ITSLLKSLDVEESEE-----GNTRVYYLKYAKATNLVEVLT 286 D R+N+LI+ AR + +L++ LD +E GN V YLK A A L L Sbjct: 260 DPRSNALILRAANPARAALVRTLVEKLDRAPAESSNGAAGNIYVVYLKNADAVRLAATLR 319 Query: 287 --------------------------------------------GVSEKLKDEKGNARKP 302 G S NA +P Sbjct: 320 AAMAANQLPGTPGAPGAAGGGGAPQQQQANIPQAMQQTSLSGQGGGSAAANAPLNNANQP 379 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 S+ G I AD TNSL+ITA + ++ VI +LD RRAQV++EA+IVEV Sbjct: 380 STGGQ-----IQADPSTNSLIITAPEPQYRQMRAVIDKLDGRRAQVMIEALIVEVSAKKA 434 Query: 363 LNLGVQWA-----NKNVGAQQFTNTGLPIFN--------AAQGVADYKKNGGITSANPAW 409 N GVQW N +G TN+ L N A + VA+ + + G+ + A Sbjct: 435 ANFGVQWQSALGNNAVIG----TNSSLASANILALTQALATRDVANVRPSSGL-NLGIAG 489 Query: 410 DMFSAYN-GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS 468 + Y G A FFN D ++L+TP+++TLDN+ A +GQ+VP ++ Sbjct: 490 KIGGQYILGAIANFFNSDGDA-----------NVLSTPNLLTLDNEEAKIVIGQNVPFVT 538 Query: 469 GS-QTTSGD---NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-NSTLG 523 G +TSG N F TVERK VG L+V P +NE V + I QE S+VD ++ N+ G Sbjct: 539 GQYASTSGSVGINPFTTVERKDVGLTLRVRPTINENGTVKMTIFQETSTVDGNTINNPNG 598 Query: 524 PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKR 583 PT N R+I+++VLV+ G V+LGGLL D + KVP+ GDIP++G LF+ R K Sbjct: 599 PTTNKRSIESSVLVEDGGLVMLGGLLSDDYGNTIEKVPVAGDIPVLGNLFKNEIRTRNKS 658 Query: 584 NLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ-RIDGKSKALVGSEDLPVLDE 637 NLM+F+RP ++RD + + ++Y R QQ+ + + + L G + PVL E Sbjct: 659 NLMMFLRPAVMRDGASTEAFAYDRYDEIRGMQQRTQPNTDNIMLRGVDAAPVLPE 713 >UniRef50_Q6MMM9 General secretion pathway protein D n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MMM9_BDEBA Length = 765 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 182/631 (28%), Positives = 324/631 (51%), Gaps = 91/631 (14%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 +F N +I + + + GK +IDP V+G I++ + + E Y+ FLS L + G++V Sbjct: 106 DFPNVEISDIIRAISELTGKNFIIDPGVRGKITIIAPTKITVSEAYKAFLSALAINGFTV 165 Query: 91 ITLDNGFLKV--VRSA---NVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 + FLKV R+A N++T G ++ D+++TRI+ L+++ A + LR Sbjct: 166 VP-SGSFLKVKSARNAQRDNIETFSGAYYPNA-----DQMITRIIHLKHISASQVNRDLR 219 Query: 146 QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ-QIIHLEYASAED 204 + N+ YEP+N +I++ S I++++++I ++DV G E+Q ++I ++YA ++D Sbjct: 220 ILPSKDGEMNI--YEPTNSIIISDYGSNIDRVMKIISQLDVPGFEEQLEVIPVKYAKSKD 277 Query: 205 LAEILNQLISESHGKSQ--MPALLSAKI--------------------VADKRTNSLIIS 242 LA+++++++++ + K+Q P +A + + D RTNS+I+ Sbjct: 278 LADLVDKIVNKGN-KTQGSAPGTFTAGVPRFSRSAGATSQQGASFFMAIPDDRTNSIIVV 336 Query: 243 GPEKARQRITSLLKSLD--VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 G + RI L+ LD + E G VY +++ A + + L GV+ K A Sbjct: 337 GNKSGIVRIKKLISQLDFKIRAEESGGVYVYNVRHGDAEKIAQTLQGVT------KDAAP 390 Query: 301 KPSSSGAM-----------------DNVAITADEQTNSLVITADQSVQEKLATVIARLDI 343 KP++ G++ +V ITAD+ TNSL++TA + + + +++++D Sbjct: 391 KPATGGSLLSPLGSQGMQAPQEIFGGDVKITADKTTNSLIVTASKQDYDVVLNILSKIDT 450 Query: 344 RRAQVLVEAIIVE--VQDGNGLNLGV-QWANKNVGAQQFT-----NTGLPIFNAAQGVAD 395 R QV VEAII+E V DGN +G Q+ + G F N L + V Sbjct: 451 PRDQVFVEAIIMEMSVNDGNSWGIGYYQYGDSGYGKVGFNGLSNINDFLSPTGGSGAVIG 510 Query: 396 YKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKL 455 + + + +P + GF N L + K +IL+TP ++TLDN+ Sbjct: 511 FGQGKTVEVTDPVSKTTLKIPSLL-GFIN--------FLKTAKKANILSTPQLMTLDNQE 561 Query: 456 ASFNVGQDVPVLSGSQT--TSGDNVFNTVERKTVGTKLKVTPQVNEG-DAVLLEIEQEVS 512 VG V V Q TSG V T + + KL + P ++ + + +EI+Q+V+ Sbjct: 562 GELEVGDKVVVGENVQNVGTSGTTV-RTPQFEDATIKLAIKPFISPASNQIRMEIKQQVA 620 Query: 513 SVDSSS------NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 + ++S +ST R+++ + V G+TVVLGGL+ + +E V+KVPLLGDI Sbjct: 621 QLSTASTPKAFQDSTQ--PLAKRSLKTVINVNNGDTVVLGGLMKEQDQESVTKVPLLGDI 678 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 P++G LF+ + + K N++VF+ P I+R++ Sbjct: 679 PIIGWLFKSRTIVKDKTNMVVFLTPKIVRNN 709 >UniRef50_A3SDT6 General secretion pathway protein D n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SDT6_9RHOB Length = 631 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 175/644 (27%), Positives = 311/644 (48%), Gaps = 73/644 (11%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY 75 ++P A+ E + N +ADI VE + + G+T+++DP + G ++V S + ++ Sbjct: 1 MLPAPVRAQ-ETFVINLRDADISLLVEQISEITGRTLVLDPGLVGEVTVVSAEALDKEGV 59 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL-------VTR 128 + F SIL + G+ + + +V+ A +T+ G P +G+E+ VT Sbjct: 60 WSLFQSILRVRGFVAVQAGS-IWQVIPEAEARTASG-------PNLGEEVIAGSQDFVTE 111 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 ++ L +P+ + +LR ++ G + E N +++T + +++++ + + D Sbjct: 112 MLRLNRLPSAEAVRVLRPLV--AESGYIEAVEDPNGVVITDTRANVDRIMAIARSFDGDA 169 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 + +++ A A + + +++ ++ A++ D +N L++ G + Sbjct: 170 LVRSEVLRFRSADAVTVGSAILEVLGQAG--------TGARLSVDAGSNLLLVRGTPEDI 221 Query: 249 QRITSLLKSLDV----EESEEGNTRVYYLKYAKATNLVEVLTGV--------SEKLKDEK 296 I SL ++DV + E T V+ L+Y A + +++ G + D Sbjct: 222 AEIRSLAIAMDVAPRKDPREAVATTVFNLQYGDAQIIADIIKGTVGDATDITNAVAADVG 281 Query: 297 GNARKPSSSG---------AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 + + +S G A D V ITA +TNS+V+ + +++ ++ LD+RR Q Sbjct: 282 AQSAEATSDGQFVPLNRVVAPDAVNITASVETNSIVVRGTAAQVQEVGQLVHALDVRRPQ 341 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN- 406 V++EA IVEV LGVQ G + N A +++ GG++ + Sbjct: 342 VMIEAAIVEVSGEVAERLGVQLG-----------LGPNVPNGAIAASNFSNGGGVSLGSV 390 Query: 407 ------PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNV 460 PA S G+ G D+G+L+ AL+ + +L+TPS+ TLDN+ A+ V Sbjct: 391 LAAVGVPAGSALS--TGLTLGAGGNDFGILVQALSQSTSARLLSTPSVTTLDNEPATIVV 448 Query: 461 GQDVPVLSGSQTTSGDNV--FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSS 517 GQ+VP +GS T G+ F T+ER+ VG + V P++ G V L IEQE+SS+ +++ Sbjct: 449 GQNVPFRTGSFATDGNTATPFTTIERRDVGITMNVVPRITAGGVVQLVIEQEISSLTNAN 508 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 N R I V+ TVVLGGL+ D SKVP LGD+P+VG+LF+ + Sbjct: 509 VEGAADLVTNRRVINTTVMADNRGTVVLGGLITDDRINGSSKVPGLGDLPVVGELFKSRN 568 Query: 578 TERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQE---QQQR 618 +R L VF+RPTI+R + S ++ R + QQ R Sbjct: 569 ARNTQRTLFVFLRPTILRSREDITEASSRRFNRLKAADATQQPR 612 >UniRef50_B4UDG8 General secretion pathway protein D n=4 Tax=Anaeromyxobacter RepID=B4UDG8_ANASK Length = 904 Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 173/613 (28%), Positives = 303/613 (49%), Gaps = 108/613 (17%) Query: 97 FLKVVRSANVKTSPGMIADSSRPGVG----DELVTRIVPLENVPARDLAPLLRQMMDAGS 152 + ++ R+A+ K P I + P G ++++T+++ L+ A L ++ + Sbjct: 190 YWRLGRAADSKKMP--IPTYTDPESGTPASEQVITKVIRLQYADADQLRGVMGNFISP-- 245 Query: 153 VGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT-EKQQIIHLEYASAEDLAEILNQ 211 G + P + L++T I ++ ++I+ +D +G + +I+ + YASA+DLA+ +NQ Sbjct: 246 QGADIQSIPPSTLVITDTGLNIRRIEKMIEAIDKVGGGDLVRIVQVRYASAKDLADKVNQ 305 Query: 212 LISESHGKSQMPALLSA----------------------KIVADKRTNSLIISGPEKARQ 249 + G+S PA +S+ K++ D RTN LI+ EK+ Q Sbjct: 306 IFQAQGGRSPRPARISSGPARPGVPTTQPAGGSVEVSVYKVLPDDRTNKLIVIADEKSFQ 365 Query: 250 RITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA-- 307 +I L++ LDV S +G V +LK A A L L+ +++ G A++ ++ GA Sbjct: 366 QIMELVQQLDVPTSADGGVHVLFLKNANAEELATTLSNLAQ------GQAKRTTTPGAPT 419 Query: 308 -------------------------------MDNVAITADEQTNSLVITADQSVQEKLAT 336 V ITAD+ N+L++ A + + Sbjct: 420 QPAARPVGMPGAPPAAAAAPTPAGDVTAELFSGEVKITADKTQNALLVQASGADFSAVQR 479 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADY 396 ++ +LD R QV VEA+I+EV N + LGV A+ + + +TG+ ++ G + Sbjct: 480 LVEKLDRPRRQVFVEAVIMEVNLKNSMELGVS-AHGAIPYKYKGDTGVIPLSSQTGRVNS 538 Query: 397 KKNGGITSANPAWDMFSAYNGMAA------GFFN-GDWGVLLTALASNNKNDILATPSIV 449 ++SA + Y G + GF N G+L+ AL SN+ ++L+TP ++ Sbjct: 539 LD---MSSAIALGGFLTGYTGPISAELKDLGFGNIPSLGLLIQALQSNSDVNVLSTPHLL 595 Query: 450 TLDNKLASFNVGQDVP------------VLSGSQTTSG----------DNVFNTVERKTV 487 DN+ + VGQ+VP +LSGS TS +++ ++R+ V Sbjct: 596 ATDNEESEITVGQNVPFQSGYAPSGLSNLLSGSSATSTVGSALGTQGLSSLYAPIQRQNV 655 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGG 547 KLK+ PQ+NEG + L IE++ + + + LGPT R+++ ++ + T+V+GG Sbjct: 656 ELKLKIKPQINEGGNIRLTIEEQTEEI-AEKDPQLGPTTAKRSVKTQIVARDQSTIVIGG 714 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 L+ D + VSK+P LG +P++G LFR T+T + K NL++F+ P IIRD+ YR + Sbjct: 715 LIQDRAIRSVSKIPFLGSLPILGWLFRDTTTTKQKVNLLLFLTPYIIRDEADYRRI---- 770 Query: 608 YTRYRQEQQQRID 620 Y + R+EQQQ I+ Sbjct: 771 YEKKREEQQQFIE 783 >UniRef50_A9GDS2 General secretion pahtway protein D n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GDS2_SORC5 Length = 864 Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 192/671 (28%), Positives = 308/671 (45%), Gaps = 113/671 (16%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSV-QGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 N + AD+ + V+ + G+ + + Q +V + + + E Y FL+IL + Sbjct: 112 NLDEADLPELVKAISNITGRRFIYGGKLRQIKATVYAPEKVTVAEAYSAFLAILASNDLT 171 Query: 90 VITLDNGFLKVVRSANVKTSPGMIADSSRPGVG--------DELVTRIVPLENVPARDLA 141 VI FLK+V + PG +++++ P G D VTR+ L ++ A + Sbjct: 172 VIP-HGRFLKIVET------PGAVSETT-PVFGTAAPVPAEDRFVTRMYRLSHIDANEAG 223 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH-LEYA 200 +L + G+V Y P N+LI+T + I +++ +++ +DV G Q + + Y Sbjct: 224 GVLSKFKSKD--GDVTVYPPGNLLIITDTGTNIQRMLRIVEEIDVGGAGDQLWVQPVHYG 281 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAK----------IVADKRTNSLIISGPEKARQR 250 SA ++A LN+++ S G + I+AD RTNSLII+ E R Sbjct: 282 SAAEVATKLNEIVDPSRGAAGGGRPGRGGAGGAGGTGARIIADDRTNSLIITATEPDYLR 341 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV-------SEKLKDEKGNARKPS 303 + +LK LDV ++ EG V L++A L L V + G P+ Sbjct: 342 VLGILKRLDVAQTGEGQVHVLSLQHAGCKELSATLNQVLSGGSGGGAPVGGRPGARAAPA 401 Query: 304 SSGAMDN-----VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 G+ D+ V +T DE +N L+IT+ +L VI LD R QV +EA+I++V Sbjct: 402 VPGSTDDIFEGQVKVTCDEASNKLLITSSPHDYAQLRAVIDELDEPRRQVFIEAVIMDVN 461 Query: 359 DGNGLNLGVQWANKNVGAQ-----------------QFTNTGLPIFNAAQGVADYKKNGG 401 L+ G+ + + GA + + GLP A +A K Sbjct: 462 VSRSLDFGIGY---HAGAPFNGLNPDDSVVYGGNNIRQSVIGLPAQLGA--LALGIKGPA 516 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 IT +N N + G +GV+L ALA + +++LATP I+ DN A ++G Sbjct: 517 ITGSN---------NILGTGISIPAFGVVLHALAQDGDSNVLATPHILATDNVAAEISIG 567 Query: 462 QDVPVLSGSQTTSGDNVFN-------------------------------TVERKTVGTK 490 Q++P+ QT G N T R+ VGTK Sbjct: 568 QNIPL----QTNVGGGGLNQLASLAGGAGAAAGGLGGLAGLLGGLGGVGGTAARQDVGTK 623 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGP-TFNTRTIQNAVLVKTGETVVLGGLL 549 +KV P VN+ D V LE+ +E+S + LG N RT ++V+ +TVV+GGL+ Sbjct: 624 IKVVPHVNDSDQVRLELSEEISDAGAPLEGALGAIPINKRTASTTLVVRDQQTVVIGGLM 683 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 D +K+P+LGDIP++G LFR + K NL++ + P +IRD D R++ + Sbjct: 684 RDGMTTSETKIPVLGDIPVLGFLFRQRVKTKTKTNLLLVLTPYVIRDQDDLRTI----FE 739 Query: 610 RYRQEQQQRID 620 R QE+Q+ ID Sbjct: 740 RKMQERQEFID 750 >UniRef50_C1SHL2 General secretion pathway protein D n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHL2_9BACT Length = 616 Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 168/628 (26%), Positives = 312/628 (49%), Gaps = 40/628 (6%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPS-VQGTISVRSND 68 + L+ + + NF + ++++FV V + G+ + D ++G +S+ S+ Sbjct: 6 VMFLLYLLAFSSFVYAAEINVNFRDMEMQEFVSFVSEFTGRNFVYDKKDLKGQVSIESSS 65 Query: 69 TFSQQEYYQFFLSILDLYGYSVITLDNG-FLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 + + F S L G ++ D G ++++VR +++ IADS G G+ L+T Sbjct: 66 EMGTDDIMEIFASTLRANGLELV--DRGTYVEIVRQSDISD----IADSDGVGDGNALIT 119 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 I+ N A LA L ++ G V + N +++ R I KL ++++++++ Sbjct: 120 TILTSHNYDASLLAGTLIKL--KSKAGYVDVLKGLNAIVIRDRIDRITKLKKLMEKLEMK 177 Query: 188 GTEKQ-QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 I+ +E+ASA ++ L +L S+ K M IVAD +N L+++ E+ Sbjct: 178 AAGYTIHIVKVEHASASEMESTLKKLYSDLQKK--MMVANDPVIVADDYSNLLVVACAER 235 Query: 247 ARQRITSLLKSLDVEESEEGNT-RVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS 305 ++I+ ++ +D + N +V+YL A A ++ +VL+ ++ ++KG S+S Sbjct: 236 DFEKISYVISQIDSPIPSDHNAPKVFYLNNANAEDVEKVLSKLTGVENEDKGKKASNSTS 295 Query: 306 GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 + D TNS+++ + K+ +I +LD R QV VEA+I+E NG + Sbjct: 296 ------TVAFDAATNSIIVFGSPDLYSKVEGLIEKLDRPREQVYVEALIIETSIENGSDF 349 Query: 366 GVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 GV+W VGA + G + + G ++ + +P + S+ G G G Sbjct: 350 GVEW---QVGAGNDSQAGTIGYLGSDGALTSFQSSVLDGDSPNFGALSS--GFNLGIL-G 403 Query: 426 D-----------WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 D G+L + + + +IL+ P I+TLDN+ A VG++ P L+ ++ S Sbjct: 404 DIVTYEGVSFPTLGILANFVKTASGINILSNPQILTLDNEEAEIFVGENRPFLTSTKYDS 463 Query: 475 GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNA 534 +N + + + VG KL + PQ++ D + L+IEQEV V ++ + P TR+ + Sbjct: 464 NNNPVQSYDYRDVGVKLNIVPQISSNDTITLKIEQEVKKVSGATADVVAPVTLTRSTKTK 523 Query: 535 VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 V +K G +V+ GLL D S+ S VP L IP++G LF+ ++ K N+MVFI +II Sbjct: 524 VKLKDGAIMVISGLLKDDSETYNSSVPWLSSIPVIGWLFKNKNSSSEKTNMMVFISTSII 583 Query: 595 RDDDVYRSLSKEKY---TRYRQEQQQRI 619 R + + L+++K + +++E +I Sbjct: 584 RTQEDAKKLTEKKQNESSTFKEEIDNKI 611 >UniRef50_C1TK46 General secretion pathway protein D n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TK46_9BACT Length = 659 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 180/600 (30%), Positives = 298/600 (49%), Gaps = 56/600 (9%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 NF + D+ +F+ + + L K I+I P+V+GTI+V S + S E Y+ L+ L++ G S+ Sbjct: 57 NFTDLDVVKFIRFMSELLQKNIIIAPNVKGTITVMSPRSVSLAEAYKIMLTTLEMNGLSL 116 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSR--PGVGDELVTRIVPLENVPARDLAPLLRQMM 148 + + + KV++ T+ A SR PG G+++V ++VPL+ V +P Q Sbjct: 117 EDMGD-YYKVLKGG---TTLENRAVRSRIGPGYGEQVVNQVVPLDFV-----SPGFAQKA 167 Query: 149 DAGSVGNVVHYEP---SNVLILTGRASTINKLIEVIKRVDVI-GTEKQQIIHLEYASAED 204 + G V P N L+LTG A+ + +++ +++ +DV G + + ++ A+ + Sbjct: 168 VQPAAGKTVMVIPLDEGNGLLLTGPAADVQRVVNLLRALDVPDGIRRISAVPVKEANPDL 227 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE 264 LA+ L L + G + LS D + +L++ G A + ++K LDV Sbjct: 228 LAQHLANLAKDPTGPFRGLTALS-----DSSSRTLLLVGDSSALESAKKIVKRLDVPPVS 282 Query: 265 EGNTRVYYLKYAKATNLVEVLT---GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNS 321 G VY LK A A + + L+ GV+ +L+ P GAM + D TNS Sbjct: 283 -GEFHVYRLKNADAQEVAKQLSQILGVAARLQ--------PGKEGAMPT-TVVPDIPTNS 332 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN---KNVGAQQ 378 L+ + L +I +LDI+ QV+V +I EV N N G+ WA + G+ Sbjct: 333 LIFAVQEQQYAGLIDIIKQLDIQPKQVMVRGLIAEVNLTNLKNAGIDWATWGGQVSGSTV 392 Query: 379 FT-------NTGLP--IFNAAQGVADYKKNGGIT--SANPAWDMFSAYNGMAAGFFNGDW 427 F +TG+P + Q ++ + IT + P + + Y G N Sbjct: 393 FAANAALGGSTGVPSTFVDWFQDLSKKETYEWITPETGEPYREKTTVYEG------NSLI 446 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL--SGSQTTSGDNVFNTVERK 485 + L + +IL+ P ++ DNK +S VGQ +P + S S ++ +V N+ + K Sbjct: 447 YAYVQLLKKYDAMNILSMPRLMCTDNKESSLMVGQTIPQMKASTSDISNPSSVQNSYDYK 506 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 G KLK+TP + G+ V L+IEQ V S+ ST P R ++ +V V+ GET++L Sbjct: 507 DTGLKLKITPHIRSGNLVALDIEQSTEEVLSAMTSTT-PVTAKREVKTSVQVRNGETIIL 565 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGLL + K +VP+L IPLVG+LF+ ++ +R K LMVF+ P I+ + SK Sbjct: 566 GGLLKETEKSLKQRVPILSYIPLVGELFKSSTNQREKIELMVFLTPYILETPEAATEASK 625 >UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6E1_9BACT Length = 668 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 170/628 (27%), Positives = 315/628 (50%), Gaps = 69/628 (10%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQ 72 AL P A E NF++A+I+ V+++ G+ L ++D V G +++ ++ + Sbjct: 84 ALYKP-AYTGEKIDIALNFDDAEIKDVVQVILGEILNVNYVLDKRVGGKVNLHASGEVYK 142 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSR-PGVGDELVTRIVP 131 +E S+L +Y ++++ D V+ A + +I + P +++ +IVP Sbjct: 143 EELISMLNSLLYVYNFTILK-DGNLYNVLPQAEARRETSIIIHGDKIPEWSKDIIIQIVP 201 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV--IGT 189 L+ + L+ ++Q M S+GN+V +E L++ AS + KL+ +IK DV + Sbjct: 202 LKYADPKKLSSTVKQFM--SSIGNIVTHEDFPYLMIIDNASVMEKLLTIIKIFDVPFLAG 259 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKR--------TNSLI- 240 + + +Y A ++++ L L KS L AK+ D TN LI Sbjct: 260 KAMRFYEFKYVDARNMSKDLGSL-----AKS-----LGAKVGGDGEFDFVPFSDTNKLIV 309 Query: 241 ISGPEKARQRITSLLKSLDVEES---EEGNTRVYYLKYAKATNLVEVLTGV-SEKLKDEK 296 I+ + +I +K++DV + EE +Y +++ KA +V ++T + SEK+ Sbjct: 310 ITKLPELLPKIDMWIKNIDVPPTQLDEEMRVYIYKVQHQKAETIVPIITQMYSEKM---- 365 Query: 297 GNARKPSSSG--AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 A +P G ++++ + AD +TNS+++ S + + +I +D QV +E +I Sbjct: 366 --AAQPKKLGRDIVESMKVLADTETNSVIMKTFPSDYKSIKAIIEAIDATPQQVFIEVLI 423 Query: 355 VEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 VEV + L+ G +W ++ + L ++ GV D + G +A Sbjct: 424 VEVTRNDTLDYGTEWL--------WSGSNLQVY----GVGDIARAAG-----------NA 460 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 F G + +L+ LA+++ IL+ P I+ D + AS VG++VP+L+ S + Sbjct: 461 AVQFTNTFAKGSFEILIDILATSSNAKILSAPHILVRDEQPASIQVGEEVPILTSSGQQT 520 Query: 475 GDNV-FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD-SSSNSTLGPTFNTRTIQ 532 G + F V+ + G L VTP + E + LE+ QEVS+ + + PTF+TR +Q Sbjct: 521 GTTITFEQVQYRDTGIILTVTPHIAENGLITLEVNQEVSNAKLTDTGVEKSPTFSTRQVQ 580 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 ++++K+G T+ LGG+++ ++++V K+PLLGDIP +G LF+ TS + L++ I P Sbjct: 581 TSLVIKSGHTIGLGGIIEQKNEKEVKKIPLLGDIPYLGNLFKATSLIDKRTELIMLITPY 640 Query: 593 IIRDDDVYRSLSKEKYTRYRQEQQQRID 620 I + + SL T+ +++ Q ID Sbjct: 641 IANNAEDADSL-----TQAFEKKLQEID 663 >UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLP8_9BURK Length = 807 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 189/576 (32%), Positives = 279/576 (48%), Gaps = 74/576 (12%) Query: 112 MIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGN----------VVHYEP 161 +IA P GD +VPLE+ A DLA +L +M+D G+ G V +P Sbjct: 211 IIASIDGPYSGD---LEVVPLEHALAVDLAAILGRMLDEGNRGTGAAVDAGQRLSVMADP 267 Query: 162 --SNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAEDLAEILNQLISESH 217 +++L+ T + +N +I ++D + + ++L+ A A LA+ L Sbjct: 268 RTNSLLLRTPSKARLNLAKALIAKLDQPTKQPGNVWVVYLKNAEAAKLAKTLQ------- 320 Query: 218 GKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAK 277 A+LS+ ++D N+ + + L + + S T + Sbjct: 321 ------AVLSSSPISD---NNSSSGLSSLSGGGVGGLGDTSNTNNSTRNITNGSAGLGSS 371 Query: 278 ATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT-ADEQTNSLVITADQSVQEKLAT 336 + S +L GN ++N I AD TNSL+ITA + + L + Sbjct: 372 SLGSSLGGGTSSGQLSAASGNVD-------LNNGGIVQADPSTNSLIITAPEPIYRNLRS 424 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN-KNVGAQQFTNTGLPIFNAAQGVAD 395 +I +LD+RRAQV VE++IVEV G+Q+ VGA G FN D Sbjct: 425 IIEKLDVRRAQVFVESLIVEVSTDKAAEFGIQFQGLSGVGADGVRVIGGTNFN------D 478 Query: 396 YKKNGGITSANPAWDMFSAYNGMAAGFFNG-----------DWGVLLTALASNNKNDILA 444 I A A ++ S G+ G +G + G L AL S +IL+ Sbjct: 479 PGSGSNILGA--ATNLGSVGRGLNIGVIDGQVNIPGIGTISNLGFLARALESKANANILS 536 Query: 445 TPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN-----VFNTVERKTVGTKLKVTPQVNE 499 TP+I+TLDN+ A +GQ+VP ++G T SG N F T+ER+ VG L+V PQV+E Sbjct: 537 TPNILTLDNEEAKIVIGQNVPFITGQFTNSGGNGATVNPFQTIERQDVGLTLRVKPQVSE 596 Query: 500 GDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSK 559 G V L I QEVSSV S+N + G N R+I++ VLV+TG +VLGGL++D K Sbjct: 597 GGIVKLGIFQEVSSVVDSTNVS-GIITNKRSIESNVLVETGNIIVLGGLVEDRVTGNEEK 655 Query: 560 VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRI 619 VP LGD+P++GQ FRY + R K NLMVF+RP ++R++D +S+ +Y RQ QQ+ Sbjct: 656 VPGLGDVPVLGQFFRYDNRRRQKTNLMVFLRPVVVRNEDQAQSIVTNRYDYMRQLQQENQ 715 Query: 620 DGKSKALVGSEDLPVL------DENTFNSHAPAPSS 649 K L E PVL D N+ APA S+ Sbjct: 716 PEKRFGLPNME-APVLPSRRPADVARPNTVAPAQSN 750 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 146/299 (48%), Gaps = 33/299 (11%) Query: 14 ALLMPCAGHAEN--------------EQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQ 59 L + AGHA+N +++ NF NADI V +G +T ++DP V+ Sbjct: 33 GLGLGVAGHAQNLNLQSTARVQNSQEDKFALNFVNADIDAVVRAIGSFTNQTFVVDPRVR 92 Query: 60 GTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 GTIS+ S + S + L+ L L G++++ G +V+ + K ADS P Sbjct: 93 GTISLVSPEPLSAADAKNALLAALRLQGFTIVE-SGGIARVLPENDAKVQ----ADSVDP 147 Query: 120 -----GVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTI 174 G+ +VT++ L A L P+LR ++ + + Y +N L++T A + Sbjct: 148 RKAMNQSGNAIVTQVFQLNYESATALVPVLRPLIAPNNT--IAAYPNNNTLVITDYADNL 205 Query: 175 NKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSA----KI 230 ++ +I +D + +++ LE+A A DLA IL +++ E G A + A + Sbjct: 206 QRIARIIASIDGPYSGDLEVVPLEHALAVDLAAILGRMLDE--GNRGTGAAVDAGQRLSV 263 Query: 231 VADKRTNSLIISGPEKARQRIT-SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV 288 +AD RTNSL++ P KAR + +L+ LD + GN V YLK A+A L + L V Sbjct: 264 MADPRTNSLLLRTPSKARLNLAKALIAKLDQPTKQPGNVWVVYLKNAEAAKLAKTLQAV 322 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT 252 Q+ L Y SA L +L LI+ ++ I A N+L+I+ QRI Sbjct: 161 QVFQLNYESATALVPVLRPLIAPNN-----------TIAAYPNNNTLVITDYADNLQRIA 209 Query: 253 SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 ++ S+D S G+ V L++A A +L +L ++ DE GN ++ A ++ Sbjct: 210 RIIASIDGPYS--GDLEVVPLEHALAVDLAAILG----RMLDE-GNRGTGAAVDAGQRLS 262 Query: 313 ITADEQTNSLVITADQSVQEKLA-TVIARLD 342 + AD +TNSL++ + LA +IA+LD Sbjct: 263 VMADPRTNSLLLRTPSKARLNLAKALIAKLD 293 >UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVJ8_SYNAS Length = 601 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 173/602 (28%), Positives = 280/602 (46%), Gaps = 106/602 (17%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 +F+N +I+ F++ +G+ G+ LID VQG+++V S S E Y+ F S+L+++ Sbjct: 78 DFDNVEIQTFIKAIGEMTGRNFLIDKQVQGSVTVFSPKQISSDEAYRVFQSVLEIH---- 133 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA 150 G+ V A V +I+P ++ +D+ P Q + Sbjct: 134 -----GYTTVPSGA---------------------VIKILPRKDAREKDI-PTFLQDEEG 166 Query: 151 GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILN 210 G R D + T +I+ L++ + EDL ++++ Sbjct: 167 G-------------------------------REDQLIT---RIVKLKHGNPEDLKKVID 192 Query: 211 QLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE-ESEEGNTR 269 L++ P + L+I+ E QR+ ++ +LD E E Sbjct: 193 PLVTRDSIVHAYPP-----------SGMLVITDVESNVQRLLKIITALDSELEKNAIVMH 241 Query: 270 VYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQS 329 VY L+ A A +L +VL + K +P+ S NV I +D+ TNSL+ITA Sbjct: 242 VYPLQNASAEDLAKVLINLQPKETAPGSEKGQPALS---RNVQIQSDKATNSLIITASAE 298 Query: 330 VQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW-ANKNVGAQQFTNTGLPIFN 388 L +I +LD R V +EA+I+EV NLG +W A + G+ TG +F Sbjct: 299 DYALLQGLIQKLDSSRPMVYIEALILEVNIVKDFNLGTEWRAMHDAGSG---GTGSLLF- 354 Query: 389 AAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG--------------DWGVLLTAL 434 G G + P + Y ++GF G D G ++ A+ Sbjct: 355 ---GSGGLGPPAGTYNILPDVTTPATY---SSGFTFGILGTGITLGGITFQDIGAMIQAI 408 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVT 494 S+ IL+ P ++T+DN+ A +VG++VP + +TT+ + +++ E + VG LK+T Sbjct: 409 KSDTDIHILSKPQLLTMDNEEAQIHVGKNVPYATRKETTTTNLDYSSYEYRDVGVSLKIT 468 Query: 495 PQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSK 554 P +N V ++I QEVS V S + L PT N R + V +K ETVV+GG++ D ++ Sbjct: 469 PHINSEGFVRMKINQEVSQVTEDSPTGL-PTTNKRAVNTTVTIKDSETVVIGGMIGDSTQ 527 Query: 555 EQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQE 614 KVPLLGDIP++G LF+ S+ R K NL VFI P +IR +SKEK +E Sbjct: 528 LGTYKVPLLGDIPVLGWLFKSRSSNREKTNLYVFITPRVIRQHTDASRISKEKSDHLERE 587 Query: 615 QQ 616 ++ Sbjct: 588 KK 589 >UniRef50_B3R7X2 General Secretory Pathway protein D, type II secretion system n=16 Tax=cellular organisms RepID=B3R7X2_CUPTR Length = 831 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 129/322 (40%), Positives = 185/322 (57%), Gaps = 21/322 (6%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW--- 369 I AD TNSL+ITA + V L VI LD RRAQV +E++IVEV LG+QW Sbjct: 411 IQADPSTNSLIITASEPVYRNLRGVIDDLDARRAQVYIESMIVEVTATQASELGIQWQGL 470 Query: 370 -----ANKNVGA-QQFTNTGLPIFNA--AQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 N NV A F G I N A +AD ++ GI +A + G+ G Sbjct: 471 ISSSSGNNNVFAGTNFGTGGQNILNLTLAGALADSNRSAGIVAAQ---QLVPDIGGLNLG 527 Query: 422 FFNGDWGV--LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV- 478 N G+ LL AL +N ++L+TP+++TL+N+ A +GQ++P+ +GS +G Sbjct: 528 IVNRAMGLGALLRALGTNGSVNLLSTPNLITLENEEAKILIGQNIPITTGSYAQTGGAAS 587 Query: 479 ---FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSSNSTLGPTFNTRTIQNA 534 F T +RK VG L+V PQ+ +G V ++I QE S+V +++N GPT N R+I+ Sbjct: 588 VTPFQTFDRKDVGITLRVKPQITDGGLVKMQIFQESSNVVQATANLIQGPTTNVRSIETN 647 Query: 535 VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 VLV G+ +VLGGL++D + V KVPLLGDIP +G LFRY + R+K NL+VF+RP ++ Sbjct: 648 VLVDDGQIIVLGGLIEDNYGDGVQKVPLLGDIPWIGGLFRYENKNRSKTNLLVFLRPYVM 707 Query: 595 RDDDVYRSLSKEKYTRYRQEQQ 616 R L+ ++Y R +QQ Sbjct: 708 RTAGATDRLTADRYDYMRAQQQ 729 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 89/281 (31%), Positives = 146/281 (51%), Gaps = 15/281 (5%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 P A +Q NF NAD+ ++ VGQ GK +IDP V+GT+++ + S+ + Q Sbjct: 53 PDVTPANRDQVVLNFVNADLDSVIKAVGQATGKNFVIDPRVKGTVNLVTEQPVSRAQALQ 112 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKT--SPGMIADSSRPGVGDELVTRIVPLENV 135 S+L + GY+++ NGF KVV A+ K SP +I S P GD++VT++ L Sbjct: 113 TLGSVLRMQGYAMVE-SNGFTKVVPEADAKLQGSPTVIGGS--PSRGDQVVTQVFRLNYE 169 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII 195 A +L P+LR M+ + + Y +N L++T A + ++ +I VD + + +++ Sbjct: 170 SANNLVPVLRPMIAPNNT--ITAYPANNTLVITDYADNLRRIARIIAAVDAPASGEVELV 227 Query: 196 HLEYASAEDLAEILNQLISE-------SHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 L++A A D A +L +L+ G + + A L +VA+ R+NSL+I +AR Sbjct: 228 PLKHALASDTAGVLQRLLDPAAAGAAGGGGAAAVDASLRTSVVAEPRSNSLMIRATSRAR 287 Query: 249 -QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV 288 Q+ L++ LD + GN V LK A A L L + Sbjct: 288 LQQARQLIEKLDQPYARPGNIWVVPLKNADAVKLAATLRAI 328 >UniRef50_D0LLW3 General secretion pathway protein D n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLW3_HALO1 Length = 842 Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 178/612 (29%), Positives = 300/612 (49%), Gaps = 71/612 (11%) Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 +++ + + Q+ + FL L+ +V+ N L +V SA P I P Sbjct: 123 VTIIAPKRMTPQQAWGVFLVALETMNLTVVPHGN-VLTIVESAQAGKQPLPIYRRGAPAA 181 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 +LV +V E++PA +LA L + G V +N+LI+T TI+++ +I Sbjct: 182 NAQLVRMVVRPEHLPAEELARALDGLKSQH--GAVTPLASANMLIVTDYGHTISRMRTLI 239 Query: 182 KRVD-VIGTEKQQIIHLEYASAEDLAEILNQLIS-------------------------- 214 + VD + E+ +I + A A ++A L +++ Sbjct: 240 REVDQPLAGERLYLIRVRNADATEMATKLQEILGVQEQGRQASSPPTSRTRRRRGDRDAE 299 Query: 215 ---ESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV--EESEEGNTR 269 +S S++ A + +KI+ D+RTNSLI+ + A QR+ SL++ LDV + G Sbjct: 300 VQVDSGDASEVSAAVPSKIIPDERTNSLILVSSQAAYQRVRSLIERLDVGIDGGGSGRIH 359 Query: 270 VYYLKYAKATNLVEVLT----GVSEKL--------------KDEKGNARKPSSSGAMDNV 311 VY L++ A + LT G+S++ + + G++ P+ G V Sbjct: 360 VYPLEHGNAEEIANTLTSAISGISQQTTGAGARNNPRARNARAQTGDSGAPAFEG---QV 416 Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 +T D TN+LVI A L VI +LD R QV +EA+I+EVQ +GL+LG + Sbjct: 417 RVTHDAPTNALVIVASVKDFFALRDVIEKLDTPRRQVFIEAMILEVQTDSGLDLGASFHG 476 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG----DW 427 Q ++ G + Q G +A+ + G + Sbjct: 477 G-----QLSDDGTLLLGGLQTSDLQSIVPGTLAASSGLLGGVLGPLLNTQELLGVSIPSF 531 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG--SQTTSGDNV---FNTV 482 GVL ALA+++ ++L++P IVT +N+ A +VGQ++P SG T+G V +V Sbjct: 532 GVLFQALATSSNVNVLSSPHIVTTNNEEAEISVGQNIPYQSGLSGLPTAGTGVSFPVQSV 591 Query: 483 ERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGET 542 +R+ V LK+TP +N D V LEI+QE+S + S + LGP+++ RT++ V+V+ ++ Sbjct: 592 QRQDVALTLKITPHINASDMVTLEIDQEISDIASPDFAGLGPSWSKRTVKTTVVVRDQQS 651 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRS 602 +V+GGL+ D SKVPLLGD+PL+G F++T +++K NL++ + P +I+ Sbjct: 652 IVIGGLMSDRMTYNESKVPLLGDLPLLGYFFKFTERQKSKTNLLILLTPYVIKGQMDIEQ 711 Query: 603 LSKEKYTRYRQE 614 + + K TR QE Sbjct: 712 IVQRK-TRESQE 722 >UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Comamonadaceae RepID=A1TKM7_ACIAC Length = 810 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 139/357 (38%), Positives = 194/357 (54%), Gaps = 25/357 (7%) Query: 298 NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEV 357 N+ +PS+ G I AD TNSL+I+A + +L VI +LD RRAQVLVE++IVEV Sbjct: 401 NSNQPSTGGQ-----IQADPSTNSLIISAPEPQFRQLRAVIDQLDGRRAQVLVESLIVEV 455 Query: 358 QDGNGLNLGVQW-------ANKNVGAQQFTNT---GLPIFNAAQGVADYKKNGGITSANP 407 + G+QW N +G +T G I N A A + G+TSA Sbjct: 456 AANKVADFGIQWQGVMGNYGNGTIGVIGTNSTASGGANILNLALAAASGSVS-GVTSALS 514 Query: 408 AWDMF--SAYNGMAAGFFNGDW--GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 A + N A NG++ G L L + ++L+TP+++TLDN+ A +G + Sbjct: 515 ASGARPGNGLNVAIAPRINGNYYLGALANFLENTGDANVLSTPNLLTLDNEEAQIIIGNN 574 Query: 464 VPVLSGSQTTSGD----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSS 518 VP ++GS S N F TVERK VG L+V PQ++E V L + QEVS V D ++ Sbjct: 575 VPFVTGSYANSTGSSTVNPFTTVERKDVGLMLRVRPQISENGTVKLSLYQEVSQVNDGTA 634 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 N+ GPT + R+I++ VLV G +VLGGLL+D KVPL+GD+P+VG LFR + Sbjct: 635 NAVNGPTTSKRSIESTVLVNDGSVIVLGGLLEDRYSMGQDKVPLMGDLPVVGGLFRNENR 694 Query: 579 ERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVL 635 R K NLMVF+RP +IRD +L ++Y R QQ S + + PVL Sbjct: 695 RRQKTNLMVFLRPVVIRDTATSDALMMDRYEAIRALQQNIQPAPSTVMRAVSEAPVL 751 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 36/278 (12%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 NF ADI + G+ +++DP V+G +++ + +Q FL+ L L G++V Sbjct: 51 NFAGADIEAVARTMATITGRNVVVDPRVKGQLTLVTERAVPPAAAFQQFLAALRLQGFTV 110 Query: 91 ITLDNGFLKVVRSANVKTSPGMIA----DSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 + G KVV A+ K G + S G ++VT+I L A +L P+LR Sbjct: 111 VE-SAGLYKVVPEADAKLQSGSVTVTQGGSGSAPGGGQIVTQIFKLNFENAANLVPVLRP 169 Query: 147 MMDAGSVGNVVHYEP-SNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDL 205 ++ S N ++ P +N L++T A + ++ ++ +DV ++I L A A +L Sbjct: 170 LI---SPNNTINVNPGNNSLVITDYADNLQRIARIVAAMDVSNASDVEVIPLRNAVASEL 226 Query: 206 AEILNQLISESHGKSQMPALLS------------------AKIVADKRTNSLIISGPEKA 247 A ++++L+ G P + + ++ + R+NSLI+ A Sbjct: 227 APLVSRLV---EGTGSTPGMATTATGTAGAIPGQSDTAYRTTLLPEPRSNSLIVRAANPA 283 Query: 248 R-QRITSLLKSLDV-----EESEEGNTRVYYLKYAKAT 279 R + +L+ LD + GN V YLK A AT Sbjct: 284 RLALVRTLVDKLDQAPVVGSAAASGNIHVVYLKNADAT 321 >UniRef50_A6Q682 Type II secretion system protein D n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q682_SULNB Length = 678 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 165/617 (26%), Positives = 300/617 (48%), Gaps = 45/617 (7%) Query: 6 KITCCLLAALLMPCAG--HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 K+T LL LL+ A++E NF + ++ F+E+V + K ILID ++G I+ Sbjct: 2 KLTKILLGILLIFTIALQAADDETVNVNFRDLSVKDFIEMVSKITQKNILIDTDLKGKIN 61 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNG-FLKVVRSANVKTSPGMIADSSRPGVG 122 S + SIL G ++I D G F KVV+ + T+ G D S G Sbjct: 62 FVSTKPIKKSSLIPLANSILRSKGLALI--DQGEFYKVVKGS---TAAGEGLDVSSSING 116 Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 + + T + PL+N A + ++ +++ ++ ++ +NVL +T T+ + ++IK Sbjct: 117 ETMKTVMFPLKNSNAAVVRAKIKPLLNRND--KIISFKENNVLAITATPRTLQSISKIIK 174 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAK---IVADKRTNSL 239 V+ G ++ ++ L+ AS +++ + + K P + ++ I D+ TNSL Sbjct: 175 AVEKRGVKRSVVVKLKNASVKEVFPNVQNM-----AKKLFPQTIESEKVDIFKDEATNSL 229 Query: 240 IISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN- 298 I+ G E +R+ +K LD ++ ++ ++Y L+ + VE + + KL + N Sbjct: 230 ILVGKEDNDRRMIKYIKQLD-QKGDDQTQKMYVLRLKNSN--VEEMEKIMSKLISQMNNM 286 Query: 299 -ARKPSSSGAMDNVA-ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 ++P G + A + +D + N+L++ A + + ++DI + QV V+A IVE Sbjct: 287 ATKRPKKGGKPPSKAMVVSDIERNALIVLATGEQMRNIRETVRKIDIPKVQVYVKAKIVE 346 Query: 357 VQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK----------KNGGITSAN 406 + +G+++ + T++GL G + + N T + Sbjct: 347 IDKNMAEQVGMKYG---MNGGTITSSGLFTLAGNMGASALQMSPALLGFLNTNNTKTYTD 403 Query: 407 PAWDMFSAYNGMAAGFFNGD----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 P N A F + D G L L N +L+ PS++ +NK A VGQ Sbjct: 404 PVTGSVIQENNPAFKFDSTDKAFALGAALDLLEKNGAAHLLSEPSVLCTNNKEAEIYVGQ 463 Query: 463 DVPVLSGSQ--TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS 520 +L+ +Q TT+ NV N R+ +G LKV P+++ + V LE+E + +D SS Sbjct: 464 TRSILTQAQQSTTAISNVINNYSREDIGLTLKVKPRLSSNNQVTLEVETVLEDIDPSSEQ 523 Query: 521 TLG-PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ-LFRYTST 578 PT RT++ +V+ GE ++LGGL+ + +SKVP LGDIP++G+ LF +T Sbjct: 524 VEDRPTTTKRTVKTNAIVRNGEMIILGGLIKRAGGKNISKVPFLGDIPVLGEMLFTHTGD 583 Query: 579 ERAKRNLMVFIRPTIIR 595 ++N+++++ P I+R Sbjct: 584 VEREQNVVIYLTPYIVR 600 >UniRef50_Q2Y7S4 Type II and III secretion system protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y7S4_NITMU Length = 789 Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 123/324 (37%), Positives = 181/324 (55%), Gaps = 26/324 (8%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 I AD TNS++ITA ++ L V+ +LD+RR QV +EA+I E+ G+QW N Sbjct: 418 IQADAATNSIIITAPDAIYNNLRAVVEKLDVRRVQVYIEALIAEITADRAAEFGIQWQNL 477 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGI--TSANPAWDMFSAYNGMAAGFFNG----- 425 + AQ G +F A G I T+ NP + +A +G+ G NG Sbjct: 478 SNAAQG----GTQVFGGTNFNAGTAGGGSIISTAQNP---IANAASGLTIGIMNGLVTAI 530 Query: 426 -------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS-GDN 477 + L+ AL ++ +IL+TP+++TL+N+ A +GQ+VP+ +G G Sbjct: 531 PGIGPVLNIHTLIRALETDANANILSTPTLLTLNNEEARIIIGQNVPIPTGQFIPPVGGA 590 Query: 478 V---FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSSNSTLGPTFNTRTIQN 533 V F TV R+ VG LK+ P ++EG+ V ++I QEVSSV + N+T G N R+I++ Sbjct: 591 VTSPFQTVSRQDVGLSLKIKPLISEGNTVRVQIFQEVSSVVPGTVNATNGLITNKRSIES 650 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 VLV G+ +VLGGL+ D + V ++PL+G IPL GQLF Y R K NLMVF+RPT+ Sbjct: 651 TVLVDDGQILVLGGLMQDSVNDSVERIPLVGAIPLFGQLFSYNKRSRNKTNLMVFLRPTL 710 Query: 594 IRDDDVYRSLSKEKYTRYRQEQQQ 617 +R D LS +Y R EQ++ Sbjct: 711 MRAGDAADPLSDAQYDRVLGEQKK 734 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/271 (33%), Positives = 142/271 (52%), Gaps = 14/271 (5%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 NF NADI V+ V + K ++DP V+GTI++ S + Y+ FLS L L+GY+V Sbjct: 73 NFVNADIEGVVKAVSEITRKNFMLDPRVKGTINIVSAKPVPRSSVYEVFLSALRLHGYAV 132 Query: 91 ITLDNGFLKVVRSANVK--TSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 + D G +++V ++ K P + + R GD + T++ L+ A + P+LR ++ Sbjct: 133 VE-DYGIIRIVPESDAKLYQGPTLGPTNKRQLAGDRIQTQVFTLQYESAVQMVPILRPLI 191 Query: 149 DAGSVGNVVHYEP-SNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAE 207 + N + P SN L++T AS + +L ++I VD + I L++ASA D+A+ Sbjct: 192 ---APNNSITANPNSNTLVITDYASNLQRLAKIIDSVDQPSGTEPVSIPLQHASAIDVAQ 248 Query: 208 ILNQLISESHGKSQM-----PALLSAKIVADKRTNSLII-SGPEKARQRITSLLKSLDVE 261 +N+L SES +SQ P +VAD R+N+L+ SG A R+ L+ LD Sbjct: 249 TVNRLFSEST-QSQAEGAADPTQQRFTVVADARSNTLLARSGNRAALARLRQLVTVLDSP 307 Query: 262 ESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 S GN V +LK A A L E L + + Sbjct: 308 TSAAGNMHVVFLKNADAVRLAETLRAIYHNM 338 >UniRef50_A6DDM8 Type II and III secretion system protein:NolW-like protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDM8_9PROT Length = 579 Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 170/594 (28%), Positives = 286/594 (48%), Gaps = 81/594 (13%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 N + NF N DI F+++V + K ILI + G ++ S ++E Y L+IL Sbjct: 15 NAKVNLNFQNLDINDFIKMVAKITNKNILITQPISGKVNFVSVKPIDEKEVYSILLNILR 74 Query: 85 LYGYSVITLDNGFLKVVR-SANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 GY++I DNGFLKV+R S +K P + P D++ T I+ L N+P R+ Sbjct: 75 SRGYTIIK-DNGFLKVIRESQAIKEGPQL-----NPHF-DQIQTNIIKLNNIPVRNAFNA 127 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 + + + G +V N+LI+T S + + EV+KR+D T+ + I L S + Sbjct: 128 VAYL--KSNYGRIVINSDKNMLIVTDYPSNLKVIKEVLKRIDSKETKSLRNITLNNTSID 185 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES 263 + LNQ+ + + S KI+ + +NS+I+ G + ++ ++KSLDV+ Sbjct: 186 KVYPKLNQIATTLFNTK----IYSYKIIPNDVSNSIILVGQKNVVYKLARVVKSLDVKPK 241 Query: 264 EEGN-TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSL 322 + T+V LK + ATN+ ++L + + K PS IT D++TNS+ Sbjct: 242 QLNQITKVITLKNSDATNIAKILQNIVK----TKYKKNPPS---------ITLDKETNSI 288 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEV------QDGNGLNL--------GVQ 368 +I A E + T+I LD + QV V+A I+E+ Q GN L L G+ Sbjct: 289 IILATPEQIETIKTIINALDTPKEQVYVKARILEISNTKAAQIGNRLGLYAGSGTTSGLY 348 Query: 369 WANKNVG----AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN 424 + N+G A + GL I QG+A D+ Y G A Sbjct: 349 TLSANLGGPAIAFDVASLGLTIPTIKQGIA----------LGATLDLLETY-GAAKK--- 394 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVER 484 L+ PSI+ ++N ++ VG+ V VL+G T++ + + R Sbjct: 395 ------------------LSEPSILCINNTPSTIYVGKTVSVLTGKTTSTTTSE--SYTR 434 Query: 485 KTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVV 544 + +G LKV P+++ + V L ++ + + S + P + RTI +V+ G++++ Sbjct: 435 QDIGLTLKVKPRIDSDNKVALNVDAVIEDLLPGSPVNM-PITSKRTINTTTIVRNGQSII 493 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 +GGL+ D ++KVPLLGDIP++G LFR+ + K L++ + P I++ D Sbjct: 494 IGGLVRDNKDITLNKVPLLGDIPILGALFRHKQINKDKTTLVIVLTPYIVKKSD 547 >UniRef50_O67320 General secretion pathway protein D n=1 Tax=Aquifex aeolicus RepID=O67320_AQUAE Length = 625 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 165/600 (27%), Positives = 281/600 (46%), Gaps = 51/600 (8%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 F+ DI+ V + LGK ++IDP V+G I++ SN S+ E + F L G+S+ Sbjct: 21 KFDEVDIKTVAVQVAKLLGKNLVIDPRVKGKITIISNGEISESEALELFSQALASQGFSL 80 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA 150 I L+ +K+V + S G + G G E VT + L+N A + LR + Sbjct: 81 I-LEKDTMKIVPA-----SQGYPFTEIKAGKGGEFVTLVYKLKNTNASQVVSALRPFLSP 134 Query: 151 GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILN 210 G + + SN +I+T A ++NK+ +++ +D G E ++ L+Y + ++LN Sbjct: 135 --YGRIAFHAQSNSVIITDYADSVNKVKKILFYLDSGGGE-VRVYKLKYVKPSYVVKLLN 191 Query: 211 QLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRV 270 + S + P + I N++ + ++ + I ++ LD S E Sbjct: 192 PFSTLSTKRYGEPVV----IAGVDEMNAVAVYANKEIHRIIEKVISDLDDPSSLEAERSF 247 Query: 271 YY--LKYAKATNLVEVLTGVSEKLKD---------EKGNARKPSSSGAMDNVAITADEQT 319 Y L + A + E L V + +K + + +S + I D++T Sbjct: 248 YIIPLNFVSAEEIYESLNSVFKGIKSVSVGTKKAKKGKGVQALTSITLKSGMKIGFDKRT 307 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV-GAQQ 378 NSL++ A +S E + I ++D RR Q+L+ A I+E + L G++W G Sbjct: 308 NSLILYATKSEYEAVREFIKKIDKRRKQLLLTATIIEASAKSILEAGIRWQILGTHGGAA 367 Query: 379 FTNTGLP-IFNAAQG----VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTA 433 F + L ++NA + + + K+G S FF D L + Sbjct: 368 FKGSSLQDVYNAIKSGNFVIGGFSKSGTTVSIG------------GIDFFFPDLVFLFSL 415 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 L ++++ P I+TLDN+ A VGQ VP +G + N T + K VG +LK+ Sbjct: 416 LEQGTGFNVVSNPKILTLDNQEALIKVGQVVPFPTGIKYDVNGNPIITYDYKDVGLELKI 475 Query: 494 TPQVNEGDAVLLEIEQEVSSVD-------SSSNSTLGPTFNTRTIQNAVLVKTGETVVLG 546 TP++ G+ V L IE ++ + S N T+ P + R + + V+V+ G TVV+G Sbjct: 476 TPRIT-GETVRLVIELKLQEITGYLTNEVSGVNYTV-PITSNRELNSDVVVENGRTVVIG 533 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKE 606 GL+ S + K+P LGDIP++G+LFRY E+ K +L +F+ P +I L++E Sbjct: 534 GLISRKSLKSTEKIPGLGDIPVMGRLFRYDRDEKDKTSLFIFLTPYVITSPQELAKLTQE 593 >UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Burkholderia RepID=B2T7P2_BURPP Length = 791 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 124/314 (39%), Positives = 175/314 (55%), Gaps = 22/314 (7%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW--A 370 I AD TNSL+ITA + V L VI +LD RRAQV +EA+IVE+ NLG+QW A Sbjct: 378 IQADSATNSLIITAAEPVYRNLRAVIDQLDARRAQVYLEALIVELNSNTSGNLGIQWQVA 437 Query: 371 NKNVGAQQFTNTGLP--IFN-AAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW 427 N ++ A TG I N A VA G A + G+ G+ + + Sbjct: 438 NNSIFAGTNLQTGSSNSIVNLTAAAVAA----GSTGGLAGALGNGTLQQGLNIGWIHNIF 493 Query: 428 GV-----LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS----QTTSGDNV 478 GV LL AL+ ++L+TP+++TLDN+ A VG +VP+ +GS + + + Sbjct: 494 GVQGLGALLQALSQTADANVLSTPNLITLDNEEAKIVVGTNVPIQTGSYSNLTSATATSA 553 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL----GPTFNTRTIQNA 534 FNT +R VG L V PQ+ +G + L++ E S++ + +N+ GP F R+IQ+ Sbjct: 554 FNTYDRVDVGLTLHVKPQITDGGILKLQLYTEDSAIVTGTNNAATNPAGPEFTKRSIQST 613 Query: 535 VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 VL GE +VLGGL+ D + SKVPLLGDIP +GQLFR R K NLMVF+RP II Sbjct: 614 VLADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSEQKTRNKTNLMVFLRPVII 673 Query: 595 RDDDVYRSLSKEKY 608 D ++++ +Y Sbjct: 674 SDRGTAQAVTSNRY 687 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/289 (30%), Positives = 149/289 (51%), Gaps = 12/289 (4%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 L ++ LL A L+ Q NF NADI Q + +G GKTI++DP V+G ++ Sbjct: 8 LRRVATALLVAGLI--TAQTAQAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLN 65 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTS--PGMIADSSRPGV 121 + S + + + + S L + G++++ D+G LKVV A+ K P + ++ Sbjct: 66 LVSENAVPEDQALKTLQSALRMQGFALVQ-DHGVLKVVPEADAKLQGVPTYVGNTPV-AR 123 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 GD++VT++ L+N A +L P+LR ++ + V Y +N +++T A + ++ ++I Sbjct: 124 GDQVVTQVFVLKNESANNLLPVLRPLISPNNT--VAAYPANNTIVVTDYADNVRRIAQII 181 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISE-SHGKSQMPALLSAKIVADKRTNSLI 240 + VD + ++ L+ A+A D+A LN+++ S G + A L + AD RTNSL+ Sbjct: 182 QGVDSAAGQSVSVVQLKNANAIDIATQLNKMLDPGSIGSTD--ATLKVSVTADPRTNSLL 239 Query: 241 ISGPE-KARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV 288 I +L K LD + GN V L+ A AT L + L G+ Sbjct: 240 IRASNGARLAAARTLAKELDTPTTMPGNIHVVPLRNADATKLAKTLRGM 288 >UniRef50_C5S7Y5 General secretion pathway protein D n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7Y5_CHRVI Length = 733 Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 172/637 (27%), Positives = 311/637 (48%), Gaps = 78/637 (12%) Query: 31 NFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NF+ DIR+ V+++ G L ++ P+VQG S+++ +++ ++L + + Sbjct: 114 NFDGTDIREVVKVILGDLLKVNYVLHPAVQGATSLQTGRPLRREDLLPTLETLLRMNNAA 173 Query: 90 VITLDNGFLKVVRSANV---KTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 ++ + + +VV AN + +P + ++ R + + ++VPL + A ++ +L Sbjct: 174 LVQKGDRY-EVVPLANAVQGRVTP-QLGETDR-ALPNGYSVQVVPLRYIGAEEMNSILTP 230 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAED 204 + GSV V + N+L++ G + ++ L++ I+ DV + LEYA ++D Sbjct: 231 LAPEGSVIRVDNLR--NLLVIAGTSPEMSNLLDTIRVFDVDWMSGLSVGFFVLEYAKSKD 288 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP-EKARQRITSLLKSLDVEES 263 + L L+++ G P + + + N+L++ P E+ Q++ + ++ LD+ E+ Sbjct: 289 VVTQLESLLADESGN---PLKGIFRFIPVESANALLVVSPQERYLQQVRNWIERLDMAEA 345 Query: 264 EEGNTR---VYYLKYAKATNLVEVLTGV-----SEKLKDEKGNA---------------- 299 ++ VY +K++ A +L ++L+ + S K GN Sbjct: 346 RSDSSERLYVYRVKHSDAESLADILSQLFGGTGSNARKSSVGNVAPGLGRSSSIGGTTTT 405 Query: 300 ----------------RKPSSSGAMD---NVAITADEQTNSLVITADQSVQEKLATVIAR 340 R+ +SS ++ +V I AD NSL++ A +K+ + + Sbjct: 406 TTSGNSDSKTSQSQTTRQSASSHELEMSSSVNIVADAVNNSLLVRASPRDYKKILDALKQ 465 Query: 341 LDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNG 400 LDI QVLVEA IVE+ L GVQW GA + F + G D + Sbjct: 466 LDILPLQVLVEATIVEITLSGSLKYGVQWELFGPGADGKS------FASLDGTFDDAETS 519 Query: 401 GITSANPA--WDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASF 458 GI + P W M S + + A L+ALA +N ++L++PS++ +DN+ A Sbjct: 520 GIGTMFPGFNWAMVSNPDTIKA---------TLSALAGDNLLNVLSSPSVMVMDNQTAKI 570 Query: 459 NVGQDVPVLSGSQ--TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS 516 VG++VP+ + Q T++ D + T+ K G L V P+V G V LEIEQEVS+V Sbjct: 571 QVGREVPIATSKQDGTSTTDRTYTTISYKDTGVILTVKPRVTPGGLVQLEIEQEVSTVFE 630 Query: 517 SSNSTL-GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRY 575 + S L P+F RTI ++V V++ + VVLGGL++D + +P L +P+VG LF Sbjct: 631 ENASGLNSPSFKKRTITSSVAVRSNQAVVLGGLIEDTRSDGKQGIPGLYSLPVVGGLFGE 690 Query: 576 TSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 TS + L+V + P +I +D S++++ + R Sbjct: 691 TSKSSTRTELVVVLTPKVIANDQDIESVTEDFRQKVR 727 >UniRef50_C6BTY5 General secretion pathway protein D n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTY5_DESAD Length = 671 Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 182/661 (27%), Positives = 307/661 (46%), Gaps = 69/661 (10%) Query: 4 LNKIT----CCLLAALLMPCAGHAENEQ---YGANFNNADIRQFVEIVGQHLGKTILIDP 56 LNK L+ LM A A+ E AN + + +FV+ VG++ G+ I+ + Sbjct: 6 LNKFCKFFVVLFLSMFLMVSAAAAQPEGGDGVHANLESIALDEFVKFVGRYTGRNIVFNK 65 Query: 57 SV--QGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDN-GFLKVVRSANVKTSPGMI 113 + +S+ + + ++ E F +L G+ +T DN ++ +R A SP + Sbjct: 66 ESLPRTFVSIYAGQSLTEPELMAVFQQVLSGSGFHAVTRDNVTYVLPIRDAKT-ISPEIK 124 Query: 114 ADSSRPGVGDELVTRIVPLENV--PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRA 171 A S+ G G+E++T + L PA+ A L + G+V +V + V+ L Sbjct: 125 AAPSK-GNGEEIITSVFQLAGKMDPAKVQAVLTQVKSRIGTVTSVPMADAVMVMDLQDNV 183 Query: 172 STINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISE--SHGKSQMPALLSAK 229 + + KL+ ++KR ++ +I LE ++++ +A L + + GK+ P ++ + Sbjct: 184 NKMKKLLGILKRAG--AQQEHTLIELEKSNSKTVATKLTSFYKKLFTSGKTGAPPVIESL 241 Query: 230 IVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTG-V 288 A NSL++SG I SL+ LD ++Y L +A EVL + Sbjct: 242 DWA----NSLLVSGSSDQIDTIKSLIGKLDRTSESYSKMKIYRLHNIEAVVAGEVLKSLI 297 Query: 289 SEKLKDEKGNARKPSSSGAM-----------------DNVAITADEQTNSLVITADQSVQ 331 S +GN++ + + V ++ADE TN+L++ A Sbjct: 298 SGGGIPSEGNSKNSVAGDSAAKSSSSRDTSSASSNDSGGVQVSADEATNTLIVMAPTDQL 357 Query: 332 EKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQ 391 ++ + +LD + QV +EA+++E + GV+W Q + G + A Sbjct: 358 SQIDNFVEQLDQAQDQVYIEALVLETTLDHAKEFGVEW-------QGGIDLGGSV--ATL 408 Query: 392 GVADYK-KNGGITSANPAWDMFSAYNGMAAGFFNGDW-----------GVLLTALASNNK 439 G K N ++NP+ + G + G GD G L+ S Sbjct: 409 GYTKAKDSNLSAYASNPS----NVPGGYSMGVL-GDTISYAGRSFPTIGALVNFTKSATD 463 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNE 499 ++++ P I+TLDN A VGQ+ P +G +TSGD V +T E K VG KLK+TP++N Sbjct: 464 FNLISAPQIMTLDNAEAEIFVGQNRPYKTGQSSTSGDAVVSTYEYKDVGIKLKITPRINR 523 Query: 500 GDAVL-LEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS 558 D ++ L++ Q ++V +S + L P N R VL+ G T+V+GGL+ + Sbjct: 524 EDGLVKLKVYQTYNTVSEASTTEL-PITNDRKTDTTVLLADGSTMVIGGLIRADHTRTEA 582 Query: 559 KVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQR 618 VP L D+PL+G LF+ TS K LMVF+ II+ + +LSK K +YR Q+ R Sbjct: 583 GVPYLSDLPLLGWLFKTTSNSGNKNTLMVFLSARIIQTTEGLEALSKAKMDKYRN-QRNR 641 Query: 619 I 619 I Sbjct: 642 I 642 >UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUV6_SYNAS Length = 717 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 145/503 (28%), Positives = 241/503 (47%), Gaps = 57/503 (11%) Query: 126 VTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD 185 + +IVPL ++ +D+ PL++ + + + Y NV+IL GRAS + ++E I D Sbjct: 221 ILQIVPLLHIRPQDVEPLIKDLFRSDV--EIKPYTRENVMILHGRASRMRPVLEFIATFD 278 Query: 186 V--IGTEKQQIIHLEYASAEDLAEILNQLISE-SHGKSQMPALLSAKIVADKRTNSLIIS 242 V + + +I L Y E+ L +++ ++MP + K+ N+++ Sbjct: 279 VPYLRDKNLLLIRLTYWQTEEFISQLTKILEGLGFAVARMPKEPGPYFLPVKQLNAVLAV 338 Query: 243 GPEKARQR-ITSLLKSLDVEESE--EGNTRVYYLKYAKATNLVEVLTGV----------- 288 P+ R I + LD E+ E T + KY++AT+L+E + + Sbjct: 339 CPDGQTARTIRGWKEKLDTPEAAGTEFKTYTFIPKYSRATDLLESIQKLYGSMPSSDSRM 398 Query: 289 --SEKLKDEKGNARKPSSS--GAMD--NVAITADEQTNSLVITADQSVQEKLATVIARLD 342 L +G +P S A D + ++AD++ N ++I + V L ++ LD Sbjct: 399 VQPAALTTPRGVPARPGSDRGDAFDAAGLRMSADDRKNMIIILSKPDVYRNLLNLLQALD 458 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGI 402 + QVL+EA IVE+ + L GV+W I N+ G + G Sbjct: 459 VPARQVLIEATIVELTLTDELKYGVEWF---------------IRNSWDGDSYTLGTLGK 503 Query: 403 TSANPAWDMFSAYNGMAAGFFN--GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNV 460 P G+ F + G + L++ALA +K +IL+TP ++ LDN A+ V Sbjct: 504 LGLEPL--------GLTYAFLSRTGQFEALISALAEKSKANILSTPRLMVLDNMEATIQV 555 Query: 461 GQDVPVLSGS-------QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS 513 G+DVP ++G TT +V +++ ++ G LKV P +N + LEI QEVS Sbjct: 556 GKDVPTVTGQISTLDSVNTTDSTSVSQSIQYRSTGVMLKVKPTINTEGLMTLEITQEVSD 615 Query: 514 VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLF 573 + + P TR I +++ G+T+VLGGL+ + SKVPLLGDIP++G LF Sbjct: 616 IAETPGVGDSPIILTRRINTSIIAAHGQTIVLGGLMQENQSLGESKVPLLGDIPILGNLF 675 Query: 574 RYTSTERAKRNLMVFIRPTIIRD 596 + TS + K L+V + PTI+ D Sbjct: 676 KATSKTKDKTELLVLVTPTILTD 698 >UniRef50_Q04SX5 Type II secretory pathway component, protein D n=7 Tax=Leptospira RepID=Q04SX5_LEPBJ Length = 598 Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 130/458 (28%), Positives = 236/458 (51%), Gaps = 50/458 (10%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT 252 QII +E E+L IL +L S + ++ + TN++++SG ++ Sbjct: 159 QIIPIENTKPEELEPILKRLTSPN-----------TDVIVYRNTNTIVLSGSGADINKLL 207 Query: 253 SLLKSLDVEESEE--------GNTRVYYLKYAKATNLVEVLTGV------SEKLKDEKGN 298 L+ LD++ E G+ +Y L++++A + L + SE+L EK Sbjct: 208 VLINELDLKLEEASPGAIASAGDVHIYTLEHSEAEKIAATLVKLDNPVVQSEELSPEK-- 265 Query: 299 ARKPSS-SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEV 357 + P ++ + +++NS+++TA + ++ +I LD R QVL+E +IVE+ Sbjct: 266 -KVPGQIPMKVEKIKAVGHKESNSVIVTATNAEWAEIRKIIKVLDSARKQVLLEVLIVEL 324 Query: 358 QDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG 417 + + G+ W K QF N+GL ++ NG I NP + S G Sbjct: 325 TSSDLNDFGIDWRYKGEAFGQF-NSGL-----SKEANIINSNGQI---NPNVNTLS---G 372 Query: 418 MAAGFFNGDWGVLLTALASNNKND---ILATPSIVTLDNKLASFNVGQDVPVLSGSQT-- 472 + GF ++ L++N N+ +L+ P ++T+DN+ A +VGQDVPV + S+ Sbjct: 373 FSLGFLKAGSEQIIGILSANQGNENFNVLSAPQVLTVDNQEAEISVGQDVPVRTQSRNAG 432 Query: 473 TSGDN--VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRT 530 T G N + E + G KLK TP VN+ + + LE+ QE+ ++ + + PTFN R Sbjct: 433 TGGTNAVTVDNYEYRPTGIKLKFTPHVNKNNRITLELFQEIKNIAEIALAGGNPTFNRRE 492 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 I+ ++ ++ +++V+GGL+ + ++++ K+P LGDIP +G LF+ T+ + K NLMVFI Sbjct: 493 IKTSISIENTQSIVIGGLISNDKQKRIIKIPFLGDIPYLGHLFKRTTEKIKKTNLMVFIT 552 Query: 591 PTII--RDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 P I+ R++ ++ K+ + +++RI K K + Sbjct: 553 PHILDSRENADKMTVKKKMLQEQYELERERILNKEKEI 590 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 36/262 (13%) Query: 28 YGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT-ISVRSNDTFSQQEYYQFFLSILDLY 86 + AN+ + ++ F++ + L K IL+D S++G I++ S + + F S+L+ Sbjct: 54 FYANWRDTELNDFLKGMSAILKKNILLDESLKGKKITIISQKEIPIKNAFIFMKSVLESL 113 Query: 87 GYSVITLDNGFLKVV-------RSANVKTSPGMIADSSRPGVGD-ELVTRIVPLENVPAR 138 G+ V+ + + +V RS V+ +I ++ VGD +T+I+P+EN Sbjct: 114 GFGVVE-EPDLISIVKIKDALARSPVVRVGKELIPETE---VGDYRTITQIIPIENTKPE 169 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ------ 192 +L P+L+++ + +V+ Y +N ++L+G + INKL+ +I +D+ E Sbjct: 170 ELEPILKRLTSPNT--DVIVYRNTNTIVLSGSGADINKLLVLINELDLKLEEASPGAIAS 227 Query: 193 ----QIIHLEYASAEDLAEIL----------NQLISESHGKSQMPALLSA-KIVADKRTN 237 I LE++ AE +A L +L E Q+P + K V K +N Sbjct: 228 AGDVHIYTLEHSEAEKIAATLVKLDNPVVQSEELSPEKKVPGQIPMKVEKIKAVGHKESN 287 Query: 238 SLIISGPEKARQRITSLLKSLD 259 S+I++ I ++K LD Sbjct: 288 SVIVTATNAEWAEIRKIIKVLD 309 >UniRef50_C0QPL4 General secretion pathway protein D n=1 Tax=Persephonella marina EX-H1 RepID=C0QPL4_PERMH Length = 669 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 164/646 (25%), Positives = 285/646 (44%), Gaps = 103/646 (15%) Query: 12 LAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFS 71 L ++ E Q NF D++ + GK I++ ++G IS+ + S Sbjct: 28 LQRIIQQAKEFKETGQVYFNFEKIDLKLLTYFISGLTGKNIVLSADIKGQISLIFPEPVS 87 Query: 72 QQEYYQFFLSILDLYGYSVITLDNG-FLKVVRSANVKTSPGMIADSSRPGV--GDELVTR 128 + + + SIL Y I +D G F +V+ S + + +P + +++VT Sbjct: 88 IDDAWNIYTSILKSRNY--ILVDKGSFYEVIPSGFSRN----VTPPVKPELEESEDMVTY 141 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 + +N +LR + G + Y P+N++I+T S I L +VI +D Sbjct: 142 VYKFKNADVTQAVNVLRGLKSPK--GLIFSYNPANIIIITDSQSNIKNLKQVISLIDTPS 199 Query: 189 TEKQ-QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 + ++ L+Y+S+ ++A L L S+ K + K K N++++ P Sbjct: 200 EGMEIKVYKLKYSSSGEIAAALTSLFSDLAKKG-----VQLKAYNLKSQNAVVVKAPSYV 254 Query: 248 RQRITSLLKSLDVEESEEGNTRVY--YLKYAKATNLVEVLTGVSEKLK-------DEKGN 298 + I ++ LD R + YLK +KA ++ VL + E ++ +KG Sbjct: 255 FKEIQDIISILDQPTPHPTYRRFWTIYLKNSKAEDIANVLNKLLENIRLVSLKEGAKKGK 314 Query: 299 AR--------KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 + KP S+ D + AD+ +NS++I A+++ E + ++ LD ++ QVLV Sbjct: 315 TQIKNLKTYTKPVSTQKTDRPKVVADKASNSIIIYANKTEYEAIKELVQNLDKQKKQVLV 374 Query: 351 EAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWD 410 A+I EV + +GV+W Q F +QG A ++ GGI+ Sbjct: 375 TALITEVSEQALKEIGVRW-------QVF---------GSQGGAAFR--GGISKE----- 411 Query: 411 MFSAYNGMAAGFFN--GDWGVLLTALASNNKN--------------------------DI 442 GF+N G + L+++ +N +I Sbjct: 412 ----------GFYNIIGSTNFVAGVLSTSGENVEIGGNVLFFPDLLFLFSLLERGTGFNI 461 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDA 502 +++P I+T+DN AS NV Q P + N + K VG LKVTP ++ GD Sbjct: 462 VSSPKILTMDNIEASINVSQVTPFAQSVKFDINGNPIINYDYKEVGLILKVTPHIS-GDN 520 Query: 503 VLLEIEQEVSSVDSSSNSTLG------PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQ 556 +++EI QEV+ V +G P + R + + V G+T+VLGGL+ + + Sbjct: 521 IVMEIHQEVNEVIGYEKPQIGEISYVVPITSKRELNTTITVTNGKTIVLGGLVSKKTIKT 580 Query: 557 VSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII-RDDDVYR 601 + VP IP++G LF+Y S + K NL VF+ P II + +D+ R Sbjct: 581 MEGVPFFSSIPIIGNLFKYRSEDLNKTNLFVFLTPFIIEKPEDLAR 626 >UniRef50_A8UQX4 General secretion pathway protein D n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UQX4_9AQUI Length = 663 Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 167/634 (26%), Positives = 289/634 (45%), Gaps = 83/634 (13%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 NF N DI + +G+ +GK +++DP+V+G +++ + S +E + F S L + GY V Sbjct: 39 NFQNTDIGELALFMGELVGKNVVVDPAVRGKVTLVFSKPLSLKEAWDVFTSALFMQGYGV 98 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA 150 + K V+ V + + +P G EL + L A+ + +R + Sbjct: 99 VEGK----KTVKVLPVNEAVTVAKFKRKPAEG-ELAVLVFNLRYADAQTVMNAVRPFLSP 153 Query: 151 GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ----QIIHLEYASAEDLA 206 V + PSN LI+ I+K ++ +D G E + ++ HL A L Sbjct: 154 --FARVSMHSPSNSLIIADVGENIDKARRILSSLDRSGIEGEVRVYRLRHLSVKDAVKLV 211 Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE--SE 264 LN + S+ G +P ++S+ N+L++ P +A I ++ +D E SE Sbjct: 212 TPLNSVFSKRFG---IPLVVSS----SDEANALVVFAPAEAHGVIEEIISEIDTREVVSE 264 Query: 265 EGNTRVYYLKYAKATNLVEVLTG--------VSEKLK------DEKGNA--RKPSSS--- 305 + + LK+ A + E L VS + +KG + RKP + Sbjct: 265 VRSFYIIPLKFISAEEIAESLQSLLGGGRGRVSRAVNRPVQRTQKKGGSPQRKPQGNVRT 324 Query: 306 ---------GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 + + I D TNS+++ A +S E + ++I+ LD+RR QVL+ A IVE Sbjct: 325 QVVKKIGFITTKEGMKIGFDRGTNSVILYATKSEYEGIRSLISGLDVRRKQVLIAATIVE 384 Query: 357 VQDGNGLNLGVQWA--NKNVGAQQFTNTGLP-IFNAAQGVADYKKNGGITSANPAWDMFS 413 + L++GV+W K GA F T L I+++ S N +FS Sbjct: 385 ASTKSLLDIGVRWQILGKRGGAS-FRGTSLSNIYSS------------FASGNFLMGVFS 431 Query: 414 AYNGMA----AGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 A FF D +L + L + + +I++ P ++TLDN+ A VGQ VP G Sbjct: 432 DVGRTVTVGDATFFFPDLVLLFSLLETGSGFNIISNPRVLTLDNQPAIIKVGQVVPYAEG 491 Query: 470 SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG------ 523 + T + K VG +L VTP+++ GD + L I + + + +G Sbjct: 492 VKFDINGQPIITYDYKEVGLELNVTPRIS-GDNLRLTIGLNLEEIIDFVTNEIGATSYTV 550 Query: 524 PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKR 583 P + R + + V+++ G+TV+LGGL+ + + + VP L IP++G+LFR ++ K Sbjct: 551 PVTSNREVNSDVVIENGQTVILGGLVSTKTLKTMEGVPGLWRIPILGRLFRRDVKQKDKT 610 Query: 584 NLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 L +FI P ++ S E+ T+ +E ++ Sbjct: 611 TLFIFITPYVVS--------SPEELTKITEEHRK 636 >UniRef50_C0QK68 GspD2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QK68_DESAH Length = 761 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 156/654 (23%), Positives = 294/654 (44%), Gaps = 99/654 (15%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 NF+NAD+ + V + + L L++ + G +++ + + E + F IL++ G + Sbjct: 146 NFDNADLYEVVRTMAEILKINYLVEKDISGAVTIHTAGQLKRDELFYVFYQILEINGLTA 205 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGV---GDELVTRIVPLENVPARDLAPLLRQM 147 + D ++V P + S+ G G+ ++ +IVPL+ + A ++ ++ Sbjct: 206 VR-DGDLYRIVALNEASRMPIGLRTSTDDGEISHGERVIIQIVPLKFISAVEMTKIITPF 264 Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK--RVDVIGTEKQQIIHLEYASAEDL 205 + A G +V SN+++L + + I+K + ++K VD+ ++ + +A ++ Sbjct: 265 ISAD--GTIVSQADSNMMLLVDKGTNIDKALRLVKVFDVDIFKRVDHRLYTMAHADPTEI 322 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLLKSLDVE-ES 263 + LNQ + S+G+S K++ R N+++ IS + +I L+ LDV + Sbjct: 323 MQTLNQFFT-SYGQSLGK---DVKLIELGRLNAIMAISSKSEIFDKIDELISLLDVPVDG 378 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGV---------------------------------SE 290 E +Y ++ +A+ L ++L+ + + Sbjct: 379 YEPRIFIYNVRNGEASELGDLLSTIFSGKKESPSEDKNIKSSSKKEPSQAMLPVQIVSKK 438 Query: 291 KLKDEKGNARK-----PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRR 345 ++ D K AR SS ++ I D N+L+I A + + + V+ RLD+ Sbjct: 439 EINDPKTKARPTPNSISGSSSLNTSINIIPDAIRNALIIEATPADYQVVLDVLKRLDVLP 498 Query: 346 AQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSA 405 QVL+E + EV + +LGV+W + K+GG + Sbjct: 499 RQVLIEVTLAEVTLNDSSSLGVEWT-------------------------FIKDGGSVAD 533 Query: 406 NPAWDMFSAYNGMAAGFFNGD-WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464 + N + F N W LTALAS +IL++PS++ DNK A ++ +V Sbjct: 534 GLIQGTLGSTNVLQYNFGNTQKWAATLTALASKGDVNILSSPSVLASDNKEAKIDISTEV 593 Query: 465 PVLSGSQT--TSGDNVFNT-VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST 521 PV++ T GD++ T ++ + G L VTP +NE V +EI QEVS +++ Sbjct: 594 PVVTTEYKYGTDGDDMLATNIQYRNTGVILTVTPHINERGLVSMEINQEVSE---QADAV 650 Query: 522 LG-----PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYT 576 L P+F R++Q + V +T+ +GGL+ ++ + +PLL +P LF T Sbjct: 651 LAGGQEYPSFYKRSVQTTLTVNDNQTIAIGGLMRKKEEDSSAGIPLLNQLPFFKYLFGKT 710 Query: 577 STERAKRNLMVFIRPTIIRD-DDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGS 629 + K L++ I P ++ D DD+ + E +QR+ K L+G+ Sbjct: 711 AGGNEKNELIILITPRVVSDLDDI---------DQVTNEFRQRVGNTGKILMGT 755 >UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMF5_AGRRK Length = 714 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 157/624 (25%), Positives = 285/624 (45%), Gaps = 73/624 (11%) Query: 26 EQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E Y N +A I + I+G L + ++DP V G ++++++ S+ S L Sbjct: 91 EGYTLNLVDAPISAAAKSILGDILKVSYVVDPRVNGKVTLQTSQPVSRDALVDILESALA 150 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 + G +++ + + V + T+P + S+ P G + +++ L + A ++ +L Sbjct: 151 VNGAAIVRKGDSYQIVPIGNSFSTTPAVTVPSATPS-GPGVRVQVIELRFIGAEEMKSIL 209 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI-IH-LEYASA 202 + GS+ + N+L+L G + ++ + + I DV + + +H L+ + Sbjct: 210 EPISRPGSI--LRADTARNLLMLAGSNADLSAMRDAIATFDVDWMKGMSVALHPLKASQP 267 Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS-LIISGPEKARQRITSLLKSLD-V 260 D+A+ LN + G P K V + R N+ L+I+ + + LD + Sbjct: 268 ADVAKELNTIFGTQDG----PNAKLIKFVPNDRLNAVLVITSRRAYLSQAADWINKLDRI 323 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGV---SEKLKDEKGNARKPSSS------------ 305 + E VY ++ A L +VL V EK NA P + Sbjct: 324 ASTNEKQLFVYNIQNRPAKELAQVLQSVIAGQEKSAPSSSNAVAPDMAPTTLTGDATTTE 383 Query: 306 -------------------GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 G + ++ AD + N+L+I+ Q E + ++ +LD+ Sbjct: 384 PAAANTNMASATASASTTAGDSTHTSVVADVENNALLISTTQREYEHIEQILKQLDVMPT 443 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QVL+EA+I EV + L G++W F N + G++D G T A Sbjct: 444 QVLIEAVIAEVTLNDQLKFGLRWF--------FENGKFGV-----GLSDLSD--GSTGA- 487 Query: 407 PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 ++ G A F + + G L AL+S +I++ P+++ L+N+ A+ VG VP+ Sbjct: 488 -------SFPGFAWTFASSNVGATLNALSSITNVNIVSAPTLMALNNQKATLQVGDQVPI 540 Query: 467 L---SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL- 522 + S S T+S + ++++ K G L V P+VN V+L+I+QEVS+V ++ S + Sbjct: 541 VTQQSASTTSSNTAIVSSIDLKDTGVILTVLPRVNSSGRVMLDIQQEVSNVVKTTTSGID 600 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 PT R + V+V E+V LGGL+ + S+VP+LG +P+ G F+ K Sbjct: 601 SPTIQQRKLSTKVIVDDNESVALGGLIQQSNTLNHSQVPILGKMPIFGNAFKNKEDTINK 660 Query: 583 RNLMVFIRPTIIRDDDVYRSLSKE 606 L++FI+P I+RD R +++E Sbjct: 661 TELIIFIKPRIVRDVRQARDVTEE 684 >UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobium loti RepID=Q988A3_RHILO Length = 708 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 156/627 (24%), Positives = 283/627 (45%), Gaps = 85/627 (13%) Query: 27 QYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDL 85 ++ N NA I + ++G L ++DP VQGT++++++ SQ S L + Sbjct: 91 KFELNLVNAPIADAAKAVLGDALHLNYIVDPRVQGTVTLQTSQPVSQDALVDILQSALAV 150 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 + + + V S + ++P + S+ P G + +++ L+ + A ++ +L Sbjct: 151 NAAGITSRAGTYQIVPLSEIMASTPPVSVPSTSPS-GPGVKVQVLQLQFIAADEMKTILE 209 Query: 146 QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI-IH-LEYASAE 203 + GSV V N++ + G S +N + E + DV + +H L+ + E Sbjct: 210 PITRQGSVLRVDSTR--NIITVAGSDSDLNAIREAVSVFDVDWMRGMSVALHPLKTSKPE 267 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNS-LIISGPEKARQRITSLLKSLD-VE 261 +A L+ + G P + + + R NS L+I+ R + + LD + Sbjct: 268 AVAAELDSIFGTKEG----PGAKLIQFIPNDRLNSVLVITSRPAYLARAATWINKLDRLA 323 Query: 262 ESEEGNTRVYYLKYAKATNLVEVLT---GVSEKLKDEKGNAR------------------ 300 E+ E VY ++ A L VL+ G + K + + G + Sbjct: 324 ETNESQLFVYQIQNRPAKELASVLSSVLGTTVKTEGQSGGSNVAPDQTPIAMQSDGVTPA 383 Query: 301 ---KPSSS-GAMDNVA-----ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 PS S DN A + AD + N+L+I +++ +++++D+ QV++E Sbjct: 384 PLTGPSPSLPQQDNQAPAHATVVADVENNALLIQTTARDYQRIEQILSKVDVLPTQVMLE 443 Query: 352 AIIVEVQDGNGLNLGVQWANKNVGAQ--------QFTNTGLPIFNAAQGVADYKKNGGIT 403 A+I EV + L G++W +N G + LP FN Sbjct: 444 AVIAEVTLNDDLKYGLRWFFENGGTKVSVTDVAKAAAAATLPGFN--------------- 488 Query: 404 SANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 W + + V L AL+ ++++ P+I+ L+N+ A VG Sbjct: 489 -----W-----------SYATDNIQVTLNALSKITDVNVISAPTIMALNNQKAILQVGDQ 532 Query: 464 VPVLSGSQTTSGDN---VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS 520 VP+L+ +G+ + N+V+ K G L VTP++N V+L+I+QEVS+V + +S Sbjct: 533 VPILTQQSQDTGNGSAPIINSVQMKDTGVILTVTPRINNAGRVMLDIQQEVSNVTKTDSS 592 Query: 521 TL-GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE 579 + PT R +Q VLV GE++ LGGL+ + S+VP+LGDIP++G F+ Sbjct: 593 DIDSPTIQQRKVQTRVLVNDGESLALGGLIQQNNSVDRSQVPILGDIPILGNAFKQKDDT 652 Query: 580 RAKRNLMVFIRPTIIRDDDVYRSLSKE 606 + L++FIRP ++RD + R ++ E Sbjct: 653 IRRTELIIFIRPHVVRDINEAREVTDE 679 >UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P6R4_AZOSE Length = 769 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 180/704 (25%), Positives = 296/704 (42%), Gaps = 127/704 (18%) Query: 31 NFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 F A + F I+G L + + G +++ + + S+L G + Sbjct: 108 KFEQAPVTDFAHAILGDLLKLDYTLHQPLGGEVTIHTQGAVPPDKVLSILESVLAANGLT 167 Query: 90 VITLDNGFLKVVR----------SANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 + G V R + NVK P G +V +VPL+ V A + Sbjct: 168 LARDAQGLYHVGRPELLRGLGASAVNVKAIP----------TGQGMV--VVPLQFVGAAE 215 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK--RVDVIGTEKQQIIHL 197 +A +LR + A + V N+LIL+G + + ++ + VD++ + L Sbjct: 216 MADILRPVAPAEAFVRVDTLR--NLLILSGSGNQLEGWLDFVNIFDVDMLKGMSVGLFPL 273 Query: 198 EYASAEDLAEILNQLIS---------ESHGKSQMPALLS-----------AKIVADKRTN 237 EYAS +++ L + G+ Q PA + +I+ +R N Sbjct: 274 EYASVKEVDAALRAVTGAPAAAASAARGEGQQQAPAEIKQLPTFGPLGGVVRILPIERLN 333 Query: 238 SLIISGP-----EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 +L++ P ++A++ I L + D E VY ++ A +L +L+ V Sbjct: 334 ALLVVTPRAHYLQQAKEWIEKLDRPSD--GGTEPQLYVYPVQNGSAQHLGSLLSAVFGG- 390 Query: 293 KDEKGNARKPSSSG---------------------AMDN--------------------V 311 + G AR P+ SG A++N V Sbjct: 391 -GQAGAARTPTDSGVAPGLSSIGRTGLGGSGMMSQALNNAGRNDGSQTQATTQFSLGPLV 449 Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 + ADE N+L+I A S K+ + RLD+ QVL+EA I+EV + G+QW Sbjct: 450 RVVADEFNNALLIYAPGSEYRKIEAALRRLDLSPTQVLIEASILEVTLSDETRFGLQW-- 507 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN--GDWGV 429 F G DY+ +G T + + G + N G Sbjct: 508 --------------FFEGKLG-GDYRGSGLFTD-RASETLGRTVPGFSYSITNAAGQVRA 551 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 +L A+A + +++++PS++ LDN A +VG P+ S T G +++ K G Sbjct: 552 VLNAMAQKSLVNVISSPSVMVLDNHTAVIHVGDQQPIRSTQTVTDGGTTSTSIQYKDTGV 611 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLL 549 L+VTP N G V ++I+Q V+ V + ++T +FN R + + V V+TGETV+LGGL+ Sbjct: 612 MLQVTPSANAGGMVAMDIKQSVTDVGAVDDATGQRSFNQREVASKVAVRTGETVILGGLI 671 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 D + VP L DIP++G LF TS + L+V I P +++ D R L E Sbjct: 672 RDSDTNGKTGVPWLHDIPVLGPLFGTTSDVTRRTELLVMITPRVVQSDQQVRELGIE--M 729 Query: 610 RYRQEQQQRIDG----KSKALVGSEDLPVLDENTFNSHAPAPSS 649 R R E + G ++ VG + LP +E + APAP+S Sbjct: 730 RRRMEGLSVLPGWERFEADPGVGKDMLPAPEE----TPAPAPAS 769 >UniRef50_C5SIE2 Type II and III secretion system protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIE2_9CAUL Length = 626 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 163/634 (25%), Positives = 287/634 (45%), Gaps = 70/634 (11%) Query: 1 MKGLNKITCCLLAALLMPCAGHAEN------EQYGANFNNADIRQFVE-IVGQHLGKTIL 53 MK C + + ++ A+N + NF +ADI Q E I+G LG + Sbjct: 6 MKATGLAVCLTMTSGMIVSPVMAQNTAQPRPAAFSYNFKDADIAQVAEEILGNGLGVSYR 65 Query: 54 IDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRS-ANVKTSPGM 112 +DP V G ++ R + ++ + F L+ Y +++ G VVR AN + Sbjct: 66 VDPGVSGKMNFRIDQRLTKPQLLAAFEGALNAYDMAIVR--EGETLVVRPIANASVGAAI 123 Query: 113 IADSSR-PGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRA 171 SSR VG ++ R VP++ A ++A +L + V + + ++++L G A Sbjct: 124 NDGSSRLSRVGYQV--RAVPIQYAAASEVAKVLESLSREKLV--LFSSDKLSLILLGGTA 179 Query: 172 STINKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAK 229 I + I+ D + + + L ASA +A L +++ S S Sbjct: 180 DEIESAMSSIRLFDQSTLSEARIRFFSLRNASATTVAGDLEKMLKASGTGS-------VT 232 Query: 230 IVADKRTNSLI-ISGPEKARQRITSLLKSLDVEESEEG-NTRVYYLKYAKATNLVEVLT- 286 I KR N + S ++ ++ + LDV +++ + VY + A L L Sbjct: 233 IAPMKRLNGVFAFSRSKEVLDELSGWVTRLDVPSTDQALSFLVYRPRGVSAEALARTLNQ 292 Query: 287 --GVSEKLKDEKGNARKPSSSGAM--------------DNVAITADEQTNSLVITADQSV 330 G+S E +R+ + + N+ I AD++TN+++++A ++ Sbjct: 293 LLGLSSVASRETSTSRETPAGESATTATASEATNTNTDSNIRIVADKETNTVIVSAPEAE 352 Query: 331 QEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAA 390 + ++ +V+ +D AQV +EA IVEV N + GV W N A Sbjct: 353 RVRIQSVLNEVDREPAQVTIEASIVEVTLNNEFSFGVDWQT---------------INGA 397 Query: 391 QGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVT 450 +++Y + TS P FS + D L AL+S +K I++ P + Sbjct: 398 LSLSNYTTDS--TSLAPQAPGFSV------NYLRSDIKAALNALSSKSKVRIVSAPKMTA 449 Query: 451 LDNKLASFNVGQDVPVLS-GSQTTSGDN--VFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 +N AS +G VP++ SQ+T+G N + +T++ + G LKVTP+V + V +++ Sbjct: 450 RENATASLQIGDQVPIVKQNSQSTNGGNAPIVSTIDYRDTGVTLKVTPRVLNDNRVAMDV 509 Query: 508 EQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 QEVSSV + S + PT R +++++++ G V LGGL+ + PLL DI Sbjct: 510 TQEVSSVARTQTSGIDSPTIKQRKLESSLIIPEGTVVALGGLISSSESDSEGGAPLLKDI 569 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 P +G LF+ + + + L+V I+ TI+RD + Sbjct: 570 PGLGNLFKQRARNKDRTELIVLIQVTILRDPAAF 603 >UniRef50_A6FZI7 Type II and III secretion system protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZI7_9DELT Length = 777 Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 170/609 (27%), Positives = 279/609 (45%), Gaps = 74/609 (12%) Query: 60 GTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 G +++ S + + +E Y F + ++ G +V + + K+V SA+ K+ + + RP Sbjct: 110 GKVTILSPEKVTLREAYAAFYAAIESMGLTVEPTGD-YFKIVESADAKSLNLPVYEDGRP 168 Query: 120 -GVGDELVTRIVPLENVPARDLAPLLRQMMDA-GSVGNVVHYEPSNVLILTGRASTINKL 177 D VT++V +++ D+ + ++ GSV V N+LI+T R S + +L Sbjct: 169 VPNNDRYVTQLVRIKSGSTADITAVAGKLKSKQGSVEVV-----GNLLIITDRGSVVRRL 223 Query: 178 IEVIKRVDVIGTEKQQII--HLEYASAEDLAEILNQLISESHGKSQM---------PALL 226 +++IK +D G ++I L+YA AE++A+I+ + ES G S+ P Sbjct: 224 LKIIKELDEGGGTGEKIFFYQLQYADAEEVAQIVRDVFGESSGSSKTSKTKKKSSTPEAN 283 Query: 227 SAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVL 285 ++++ D RT +LII+ E I L++ LDV G V L+ A L +VL Sbjct: 284 FSRVIVDPRTGTLIITTSESDYATILKLIQQLDVRLPGGGGRIHVKQLRNADPKELAQVL 343 Query: 286 TGVSEKLK---------DEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLAT 336 +++ ++ A S+ +V ITADE T SLVI A + + L Sbjct: 344 QSLTQGGGGGSAAKKGGNKAATAGGASAELFSGDVKITADEATRSLVIIASAADYKSLEP 403 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADY 396 +I LD R QV +E ++E G L G GA F G + Sbjct: 404 IIDELDRDRKQVYLEIYLLEASVGRSLTTGA-------GAH---------FAGQFGQGEQ 447 Query: 397 KKNGGITSANPAWDMF-----SAYNGMAAGFFNGD----------------WGVLLTALA 435 + G I+S+ +A +G+A G +GV++ AL Sbjct: 448 QSVGLISSSPSPDVSSILLSPAALSGLAGGLIGPQLIGTGAQLGLERDIPAFGVVIQALQ 507 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPV-----LSGSQTTSGDNVFNTVERKTVGTK 490 SN+ +I+A P I T DNK A VG+ VP G+ + ++ R+ V Sbjct: 508 SNDDVNIVAEPHIYTADNKEAQIEVGRKVPTPGALQFGGAGGGTSLTPLQSINREDVTLD 567 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQ-NAVLVKTGETVVLGGLL 549 +KVTP V + ++ L+IE E V + LG T R I+ VL + VVLGGL+ Sbjct: 568 IKVTPHVKDETSLTLDIELEDRDV-VDQDPVLGVTTTKRRIKLENVLARDDLPVVLGGLM 626 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 + E +VP LG IP++G LF+ ++ K NL++ + P ++ D R + E+ T Sbjct: 627 RERELENTQQVPGLGSIPILGWLFKRRVKQKEKINLLIVLIPHVVETADDIRRI-HERRT 685 Query: 610 RYRQEQQQR 618 R R E +R Sbjct: 686 RERMEFLER 694 >UniRef50_B0UFJ1 General secretion pathway protein D n=4 Tax=Methylobacterium RepID=B0UFJ1_METS4 Length = 797 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 108/310 (34%), Positives = 166/310 (53%), Gaps = 21/310 (6%) Query: 295 EKGNARKPSSSGAM-DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 E G + SGA + I ADE NSLVI+A ++ EK+ ++ RLD R QVL+E + Sbjct: 453 EAGGSGAVYGSGARRGGIGIVADETNNSLVISATRTQYEKILRILGRLDARPTQVLLETV 512 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 I EV + L GVQW KN G++ FN AQ G + A + S Sbjct: 513 IAEVTLNDKLEFGVQWFLKNGGSR---------FNLAQSDTAASVASGTSGAG---ALVS 560 Query: 414 AYNGMAAGF----FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL-- 467 A GF + D+ V+L AL + ++L++P+I LDN+ A +G VP++ Sbjct: 561 AAMRGVPGFNYLLNDADFHVVLNALRGVTRVNVLSSPNITVLDNRTARLQIGDQVPIVKQ 620 Query: 468 SGSQTTSGDN-VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPT 525 SG +G+ + N +E K G L VTP+VN+ V+L+I QEVS V ++ S + PT Sbjct: 621 SGQSALAGNAPILNQIELKDTGVILSVTPRVNKNGLVVLDINQEVSDVVPTTTSNINSPT 680 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 R + +V V G ++ +GG++ + ++ +P+LGD+P++G FR S R + L Sbjct: 681 IRQRRVATSVAVSDGHSLAIGGMVQEKAQIGTEALPVLGDLPVIGPAFRNKSDLRVRTEL 740 Query: 586 MVFIRPTIIR 595 +VF+RP +IR Sbjct: 741 IVFLRPKVIR 750 >UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Comamonadaceae RepID=A1TUQ3_ACIAC Length = 829 Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 114/316 (36%), Positives = 165/316 (52%), Gaps = 13/316 (4%) Query: 305 SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN 364 S + V + ADE NS+++ ++ K+ + RLD+ QVL+EA IVEV + L Sbjct: 495 SANLGGVRLMADELNNSVLVWGTKANYMKIEATLKRLDLPPTQVLIEASIVEVTLDDTLQ 554 Query: 365 LGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN 424 G+QWA N G G + N G +D K G + P FS A Sbjct: 555 YGLQWAFNNAGPSNLNGAGQLLTN---GPSD-KTPIGSSIPTPTSSGFS----YALSNSL 606 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS---GDNVFNT 481 G V+L ALA+ ++++PS++ LDN A +VG PV +GS TS G++V +T Sbjct: 607 GSVRVVLNALATKRLLKVISSPSLMVLDNHTAMMSVGNQQPVKTGSLITSVSGGNSVADT 666 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV--DSSSNSTLGPTFNTRTIQNAVLVKT 539 ++ + G L VTP VN G+ V ++I+Q V+ D+S + +L P F R I + V V++ Sbjct: 667 IQYRDTGVSLAVTPSVNAGNLVTMQIDQAVTDAVADNSGSISLQPVFQQRQITSKVAVRS 726 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 GE +VLGGL+ D S S VPLL DIPLVG LF + L+V I P ++R D Sbjct: 727 GEAIVLGGLIRDTSNSSKSGVPLLQDIPLVGSLFSNNGKTGNRTELLVVITPKVVRTDID 786 Query: 600 YRSLSKEKYTRYRQEQ 615 R +S E R + Q Sbjct: 787 IREVSDELRDRLKGLQ 802 >UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKZ0_MARMM Length = 686 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 159/601 (26%), Positives = 283/601 (47%), Gaps = 59/601 (9%) Query: 31 NFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NF + + V IVG LG+T+++ V G IS+ S + + ++L Sbjct: 105 NFVDVPVADVVRTIVGDALGQTVMVADGVTGRISLTSAEPAPARAALAALETVLGESNLV 164 Query: 90 VITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMD 149 + G+L + R + PG+ SS G G R+VP+ + + L+ + Sbjct: 165 LAERAEGYL-LTRLDMAR--PGLTGLSSELGYGG----RVVPVTHTTPSAIVSLIDPFLS 217 Query: 150 AGSVGNVVHYEPSNVLILTGRASTIN--KLIEVIKRVDVIGTEKQQIIHLEYASAEDLAE 207 VV ++ VL+L G ++ + ++ + + L Y SAE Sbjct: 218 DRV--EVVPHDALGVLVLAGPGPDVDGARRAAILFDRPFLTDRVFGMFELRYVSAETAKS 275 Query: 208 ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRITSLLKSLDVEES-EE 265 ++ ++S + G S + + + +A R N L+++ ++++ ++ ++ LD + E Sbjct: 276 EVDTVLSGT-GMS----IDAIQTIAMPRLNMLLVTARDRSQFEQAQVWIERLDRPSAGSE 330 Query: 266 GNTRVYYLKYAKATNLVEVLTG------------VSEKLKDEKGNARKPSSSGA-MDNVA 312 R Y ++ A+ L +T + + + + + +PS+ G + Sbjct: 331 RRLRYYVVRNTPASTLATQITAAFAGGQTGAGQLIEPRFQGDDAHG-EPSAPGEEQSRLT 389 Query: 313 ITADEQTNSLVITA-DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 I DE N+L+I A DQ +E L ++ R+D+ QVL+EA I EV+ +GL+ GV+W Sbjct: 390 IIPDELNNALIIRATDQEYREIL-DLVQRMDVMPPQVLIEATIAEVRLEDGLDFGVRWYF 448 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLL 431 +N G+ N + N G T+ +F +N F D L Sbjct: 449 ENAGS-----------NETSSLQFSDSNTGSTAP-----VFPGFN---YAFSGTDLTATL 489 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT---SGDNVFNTVERKTVG 488 +AL S +L+ PSI+ +N+ A VG +VP+++ + T+ S + ++VE + G Sbjct: 490 SALRSITDVTVLSAPSIMVQNNQTAHLQVGDEVPIVTQTATSVTESNAPIVSSVELRETG 549 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETVVLGG 547 L+VTP++N V+LE+ QEVSSV ++ S + PT + V V++ T+ LGG Sbjct: 550 VILQVTPRINASGMVVLEVNQEVSSVRPTTTSGIDSPTIQKLEFTSTVSVRSSNTIALGG 609 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII-RDDDVYRSLSKE 606 L+ + + + S+ PLLGDIP VG LFR + + L++F+ P II DDDV +L+ Sbjct: 610 LIRETTSDNESRTPLLGDIPGVGNLFRNRAMTSQRSELVIFLTPRIIWTDDDVGSALTHV 669 Query: 607 K 607 + Sbjct: 670 R 670 >UniRef50_B9L741 Putative GspD n=1 Tax=Nautilia profundicola AmH RepID=B9L741_NAUPA Length = 580 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 141/574 (24%), Positives = 272/574 (47%), Gaps = 59/574 (10%) Query: 32 FNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVI 91 F N +I F+++V + K IL+ ++G ++ S ++ E Y L+IL GY++I Sbjct: 23 FKNLEINDFIKMVAKITNKNILLTNDLRGKVNFISVKPVNENEIYDILLNILRSKGYTLI 82 Query: 92 TLDNGFLKVVRSAN-VKTSPGMIADSSRPGVGD--ELVTRIVPLENVPARDLAPLLRQMM 148 ++G+LKV++SA+ +K +P + G D ++ T I+ L N+ A+ + + Sbjct: 83 K-EHGYLKVIKSADAIKEAPPI-------GKSDIYQIRTDIIKLHNISAKTAYTQINYL- 133 Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE----- 203 G ++ + N+LI+T + + +++ ++D + +K II + + Sbjct: 134 -KSKYGKIILNKDKNLLIITDYPKNLKIMKKLLSKIDTL--DKPDIIFFNLQNTQLSKIY 190 Query: 204 -DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE 262 + EI N L ++ + KI+ + +N +I+ GP K Q+I +K LD + Sbjct: 191 PKITEISNTLFNDK--------IYKYKIIKNDNSNGIILVGPNKVIQKILQHIKQLDTKP 242 Query: 263 SE-EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNS 321 + + T + LK + TN+ +++ +K+ K PS IT D++TNS Sbjct: 243 KQLDQVTEIITLKNSDVTNMAKII----QKIVSLKYKKNIPS---------ITEDKETNS 289 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 L+I A + + T+I LDI + QV V+A I+E+ NL +G + Sbjct: 290 LIIIATLEQMDTIKTIIKALDIPKMQVYVKARILEIS-----NLKASQIGNKLGLYAGSG 344 Query: 382 TGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKND 441 TG ++ + + GG A + + + G G LL + K Sbjct: 345 TGSGLYTLSANM------GGPAIAFDVTSLGLSIPTIRQGLALGATIDLLETFGAAKK-- 396 Query: 442 ILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGD 501 L+ PSI+ ++N ++ VG+ + V + T+ + + R+ +G L++ P+++ + Sbjct: 397 -LSEPSILCINNTPSTIYVGKTISV--KTGQTTSTSTSVSYSRQDIGLTLEIKPRIDSDN 453 Query: 502 AVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVP 561 V L ++ V + S PT + R I+ +V G+++++GGL+ + + KVP Sbjct: 454 KVSLNVKAVVEDILPGSPDLTLPTTSKRDIKTTTIVSNGQSIIIGGLVRNNKDITIKKVP 513 Query: 562 LLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 GDIP++G LFR+ K L++ + P I++ Sbjct: 514 FFGDIPIIGALFRHKEVNEDKTTLVIVLTPYIVK 547 >UniRef50_Q3JD22 General secretion pathway protein D n=2 Tax=Nitrosococcus oceani RepID=Q3JD22_NITOC Length = 833 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 105/322 (32%), Positives = 166/322 (51%), Gaps = 43/322 (13%) Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 V + D + N+L+I+A V EK+ + +LDI QVLVEA I EV + L GV+W Sbjct: 498 VRVIPDVENNTLLISAPPPVYEKILVALHQLDIPPRQVLVEATIAEVTLTDDLQYGVRWF 557 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN--GDWG 428 F NTG V DY G +T+A P F+ G F+ G Sbjct: 558 --------FENTG---------VKDYLGRGALTAAIPGTSTFTY------GLFDAAGAAR 594 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVG 488 ++L L+S K +L++P ++ LDN+ A VG +P+ +GS G N ++ + G Sbjct: 595 IVLDTLSSQTKVKVLSSPQLLVLDNQTAEIRVGDQIPIQTGSTIGIGGNSTTRIQFRDTG 654 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSV----------------DSSSNSTLG--PTFNTRT 530 L VTP+VN G V +E+ QEV+ V D ++N T+G PTF R+ Sbjct: 655 VLLTVTPRVNAGGRVTMELTQEVTDVGGTKLPTSAAPSGDGDDDNNNQTVGNNPTFLQRS 714 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 ++ V V++G+T+VLGGL+ D + S +P L +PL+G LF T+ +++ L+V + Sbjct: 715 FRSVVTVQSGDTIVLGGLIRDNERFSDSGLPFLHKLPLIGPLFGATAKSKSRTELIVLMT 774 Query: 591 PTIIRDDDVYRSLSKEKYTRYR 612 P ++R+ R +++E + R Sbjct: 775 PRVVRNQYEARLVTEEFREKLR 796 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 128/263 (48%), Gaps = 18/263 (6%) Query: 31 NFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NF N DIR+ V+ I+G L + +ID +VQGT++V++ + ++L L + Sbjct: 107 NFENTDIREVVKTILGDILEENYVIDRAVQGTVTVQTGRPLPKDALMPTLETLLRLNNAA 166 Query: 90 VITLD--NGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQM 147 +I + N + + ++ SP + ++ VG ++ RI+PL+ + A ++ +L Sbjct: 167 LIQAEGLNKIVPLNQAVQGNLSPRL--SRAKSTVGYDV--RIMPLDYIGAGEMEKILEPF 222 Query: 148 MDAGSVGNVVHYEPS-NVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAED 204 + +V +P+ N+LIL G A +++ E I DV E + LEY AE Sbjct: 223 VPK---DGLVRVDPARNLLILAGTAKELDQWQETIDIFDVNWLEGMSVGLYRLEYTDAEL 279 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNS-LIISGPEKARQRITSLLKSLDV-EE 262 L LN ++ ++ P + + +R N L+++ + + + ++ LD E+ Sbjct: 280 LVNELNIVMGP---EATTPLAGMFRFIPIERLNGILVVTSQSQYLKEAKTWIERLDQGED 336 Query: 263 SEEGNTRVYYLKYAKATNLVEVL 285 +E VY +++ +A +L +L Sbjct: 337 TESERLYVYPVQHGRADHLAALL 359 >UniRef50_C1A7C5 Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7C5_GEMAT Length = 621 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 152/594 (25%), Positives = 270/594 (45%), Gaps = 81/594 (13%) Query: 21 GHAENEQYGA--NFNNADIRQFVEIVGQHLGKTILID--PSVQGTISVRSNDTFSQQEYY 76 G A Q G+ +F NA + + + LG+T+++ P V+ T + S S + Sbjct: 58 GQAGRAQPGSSLDFANARLADVIRTLATMLGRTVILSDIPDVRLTFATPS--AVSTSDLE 115 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS----SRPGVGDELVTRIVPL 132 + S+L+ +G +++ +G + V + G + P +G LVT++VPL Sbjct: 116 RVLESVLEAHGLMLVS--SGTVAQVMPNDKAPMTGTLRSGFPFPDPPPLG--LVTQLVPL 171 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE-- 190 +++ A + A LR ++ G+ +V SN L+L R + + + +++++ +D Sbjct: 172 QSIRADEGADALRAVLAKGARVEIVAR--SNALLLVDRGANMARYLDLLRTLDAAPNGES 229 Query: 191 --KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 + +++L+YASAE++A ++ L +G VA+ SL + Sbjct: 230 GLRTYVVNLKYASAEEMAGVVGSL----YGVQ----------VANAGAGSL-------SD 268 Query: 249 QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM 308 + ++ L + + E TR AT + TG + AR ++ + Sbjct: 269 RSLSRALDTFRARDQETFRTRQTTSSSGAATPV----TGATV--------ARDSAAGLLV 316 Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 + A+ TNSLVI L I LDIR AQVL E I E+ G G G+ Sbjct: 317 GRTTVVANTPTNSLVIRTAPPNFPMLRETIEALDIRPAQVLFEVTIAEIALGRGFEFGID 376 Query: 369 WANKNVGAQ---QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 WA N G QF N +P + + + G G+ A Sbjct: 377 WAAVNRGGDVQAQFGNPEIPDTGSTSALLRVVRLDG--------------TGVRA----- 417 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 LL +AS ++ +LATP I+ +N+ AS VG VP +S ++ + ++ V+ + Sbjct: 418 ----LLRTIASKSEVQVLATPEIMAANNREASILVGSKVPFISSTRLGNDISIDRAVQYQ 473 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL--GPTFNTRTIQNAVLVKTGETV 543 VGTKL + P +N+ + +++ QEVSS+ + + P +TR +++ G+T Sbjct: 474 DVGTKLAIIPTINDEGYISVQLLQEVSSLTPQTVAAALSAPVISTREASTRAVLRDGQTA 533 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 V+ GL+ + Q +P+L DIP +G LF+ S+ R + L +F+ P ++R D Sbjct: 534 VIAGLIGETRTTQDQGLPILKDIPWLGALFKRQSSTRQRTELAIFVTPYVVRSD 587 >UniRef50_B4U6K2 General secretion pathway protein D n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6K2_HYDS0 Length = 660 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 169/684 (24%), Positives = 287/684 (41%), Gaps = 121/684 (17%) Query: 1 MKGLNKITCC----LLAALLMPCAGHAE------NEQYGANFNNADIRQFVEIVGQHLGK 50 MK L KI C +L ++ H + N NF N I + + + GK Sbjct: 1 MKILRKINCLNIFSVLWIFIVFGMAHGKGKTKYLNNMVVLNFQNQSIDDIAKFMSKLTGK 60 Query: 51 TILIDPSVQGT---ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVK 107 TI+I ++G I+V S S ++ + FL+ L L GY+V+ N F K++ Sbjct: 61 TIVI--GIKGNLPKITVSSKKPVSVEDAWHLFLTSLALDGYTVVKYKN-FYKILPLKEAS 117 Query: 108 TSPGMIADSSRPGVGDELVTRIVPLEN-VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLI 166 + + + P E + + + P L Q GN Y PSN LI Sbjct: 118 SFSTSVTKKAFPSPSIETYIYFAHTNSQILLNAVRPFLSQY------GNATVYMPSNALI 171 Query: 167 LTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQ---MP 223 ++ +++K+ +++K +D+ L+ +D ++ L ++ SQ +P Sbjct: 172 ISDIGVSVDKIQKLLKSIDI----PNLAFSLKMYQTKDTNAVVKALSPLANPVSQKFGIP 227 Query: 224 ALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYY---LKYAKATN 280 ++S+ ++ +++ P+ + I ++ ++ ES R YY L+ A Sbjct: 228 MVVSSVQKKHSKSGFVLVYAPKLMQASIKEIIHKIN--ESASHFRRHYYVIPLQNASVGE 285 Query: 281 LVEVL-------TGVSEKLKDEKGN-------------------------ARKPSSSGAM 308 + + L + +S K N + KP S + Sbjct: 286 MAKTLASLFGSASAISSTTKRPTPNLNTMQNQPQTIQSNVPPNQNINVISSNKPIGSIYL 345 Query: 309 -DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 D I D TNS+++ A +S E L +I +LD +R QVL+ A +VE L GV Sbjct: 346 SDGTRIGFDRATNSVILYATKSQYENLKNLIKKLDEKRIQVLIAASVVEANLTKQLTTGV 405 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF---- 423 W A G KNGGI NPA + + Y G+ +G F Sbjct: 406 NW-------------------QALG-----KNGGI-GFNPA-SLQTIYQGLLSGNFVVGV 439 Query: 424 ----------------NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL 467 D V L+ L N I++ P ++TLDN+ A Q P + Sbjct: 440 TSSSSISANVGGNTIIFPDLAVFLSLLEQGNGFKIISNPKVLTLDNEEAIIKEAQVYPYV 499 Query: 468 SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG---- 523 +G+Q T + K +G +L V P V++ D + L I + + +N+ + Sbjct: 500 TGTQYNINGFPILTYDYKDIGLELDVIPTVSK-DNIRLGINLNLQDITGFTNTNVAGQTV 558 Query: 524 --PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 P R + + V+VK+G+TV+LGGL+ + + + +S +P+L DIP++G LF+Y + E Sbjct: 559 PIPITTDRVLNSEVVVKSGQTVILGGLVSNNTIKNISGIPILQDIPVLGNLFKYQNRENK 618 Query: 582 KRNLMVFIRPTIIRDDDVYRSLSK 605 K L +FI P II+ D ++K Sbjct: 619 KSTLFIFITPYIIKSPDQLAKITK 642 >UniRef50_B7S1V0 General secretion pathway protein D n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1V0_9GAMM Length = 727 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 169/680 (24%), Positives = 301/680 (44%), Gaps = 113/680 (16%) Query: 31 NFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NF A + + I+G L ++D +QG +++R+ + + S+L Sbjct: 91 NFEQAPLSEVTHAIMGDILELDYVVDHPIQGQVTLRTRTPIPRDQLLGVLESLLKANNTI 150 Query: 90 VITLDNGFLKVVRSA-NVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 +I +G V SA K SP + + R + T IVPL+ + A+++A +L+ + Sbjct: 151 MIRGSDGRYLVTGSARGTKLSPSV--SNPRDNIAG-YSTVIVPLQFISAKNMAEILKPVA 207 Query: 149 DAGSVGNVVHYEPS-NVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAEDL 205 D + V + S N+L+L G + ++ ++++ DV + + LE + ++ Sbjct: 208 DESAF---VRIDSSRNLLVLAGTRTQLDGWLDMVSTFDVDQLKGMSVGLFPLENSEVAEV 264 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRITSLLKSLDVEESE 264 + L+ ++ + S M ++ ++V R NS++I P + ++ LD Sbjct: 265 VDALDAIMGTTQDGSSMKDMI--RVVPVDRLNSILIVTPRAHYLGTVEKWIERLDEAHYS 322 Query: 265 EGNTR--VYYLKYAKATNLVEVL----------------------TGVSEKLKDEK-GNA 299 + R VY ++ A+ L +++ +GV+ L E G++ Sbjct: 323 ALDRRLYVYPVQNTTASRLSDLINSIYSGGQSSGRSQSRGGYRDSSGVAPGLSPETLGSS 382 Query: 300 RKPSSS-------------------------------GAMDNVA---ITADEQTNSLVIT 325 R SS G+ D A + AD++ NSL+I Sbjct: 383 RGMGSSNRGGSSNRMGSGRSSGNTGSSVANVNMEGVTGSGDETAEVRVVADDENNSLMIY 442 Query: 326 ADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLP 385 A + + T + +LD+ QV++EA I+EV + L G++W Sbjct: 443 ATSMQYKVIKTALDQLDVVATQVIIEASIIEVSLTDELRYGLEWT--------------- 487 Query: 386 IFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN--GDWGVLLTALASNNKNDIL 443 F+ + G ADY +G ++S A S G + N G+ +L ALA + +I+ Sbjct: 488 -FSNSLG-ADYDGSGFLSSIAGAESPASIVPGFSYTVTNSIGNVSAVLNALAEESLLNII 545 Query: 444 ATPSIVTLDNKLASFNVGQDVPVL---SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEG 500 +TPS++ LDN A +VGQ VP++ +GS D V ++ + G KL V P VN G Sbjct: 546 STPSVMVLDNHYAYIHVGQQVPIIDSQTGSLANDTDRVTQSITYRDTGVKLDVRPSVNAG 605 Query: 501 DAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 + +++ Q V+ V +T F R I++ V V++ E+VVLGGL+ + S V Sbjct: 606 GLITMDVAQSVTDVGEIDAATGQRAFLERNIESRVAVRSNESVVLGGLIRENSGTASQGV 665 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRID 620 P L +P+VG LF S + L+V I P + ++D RS+S+E ++ R Sbjct: 666 PWLHSVPIVGSLFGTDSARSNRTELLVIITPRALYNEDELRSVSEEMRSKIR-------- 717 Query: 621 GKSKALVGSEDLPVLDENTF 640 +L ++DEN+F Sbjct: 718 ----------NLELIDENSF 727 >UniRef50_B6QWW0 General (Type II) secretion pathway (GSP) D protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QWW0_9RHOB Length = 749 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 158/638 (24%), Positives = 292/638 (45%), Gaps = 94/638 (14%) Query: 31 NFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NF + F++ +G L +ID ++GT++ ++ + ++ + +L GY Sbjct: 136 NFRGESLEYFIQQTLGGILQVNYVIDEPLEGTVTFQTENPIAKDQMLSLVRVLLGRNGYI 195 Query: 90 VITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMD 149 + +D F + R ++ I S G +L RI+P+ + + D A +L+ ++ Sbjct: 196 LKLIDQIF-HIGRPETIQA----IEQFSGVGSAGDLKLRILPVRSASSDDAAKVLQAILP 250 Query: 150 AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ--QIIHLEYASAEDLAE 207 AG+ + V E SN + + R I E++ + +K ++ L+ +SA +A+ Sbjct: 251 AGA--SAVAVEGSNKIAIRARPEDIGAAEELVNSLYNRDNDKTIVSVLRLQQSSASQVAK 308 Query: 208 ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRITSLLKSLDVEESEEG 266 + L + + +Q+ + L+ I+ + SL+++ + QR+ + K +D + Sbjct: 309 QITTLFQQLY-PNQLTSPLT--IIPLETQQSLLVAVQSREMLQRVRRITKEVDYNLLDTP 365 Query: 267 NTRVYYLKYAKA----TNLVEVLTG----------VSEKLKDEKGN---ARK-------- 301 R+ LKY A T L ++L G V ++ + +GN ARK Sbjct: 366 KVRIITLKYLPANEIATQLTQILEGEGGSGVAAPPVEQRQQASRGNGSSARKFPVSANGE 425 Query: 302 --------------------------PSSSGAM-DNVAITADEQTNSLVITADQSVQEKL 334 PS+ A+ V I AD + N+L++ + + + Sbjct: 426 SVGPAEDSISNRFSNANKLFDGLTDAPSNRVAVGSKVGIVADSRNNALLVNSTYKEFKHI 485 Query: 335 ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVA 394 V+ LD+ +QV++EA I EV + L+ GVQW +A Sbjct: 486 RDVVQALDLPLSQVVIEATIAEVNINDNLSYGVQWY----------------------LA 523 Query: 395 DYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNK 454 GGI + + G A V+L AL + K ++++P + LD + Sbjct: 524 KGNFAGGIGAVADGASRPTKAAGGALSLNTVGVDVVLKALQNITKVKVISSPYLTVLDGR 583 Query: 455 LASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 A +G VP S SQ++S D V N V+ K G L+V P + ++VLL+I+QEV Sbjct: 584 KARLVIGDQVPFASRSQSSSNDGNVTVTNEVDVKDTGIVLQVEPNIRSNNSVLLQIQQEV 643 Query: 512 SSV--DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLV 569 S+V + + +L PT TRTI + ++V++G T++LGGL+ + + S VP+L IP+ Sbjct: 644 SNVVQNKTEEGSLTPTIATRTINSDIVVESGRTILLGGLIQERKENGESGVPILRKIPVF 703 Query: 570 GQLFRYTSTERAKRN-LMVFIRPTIIRDDDVYRSLSKE 606 G+LF+ +T +R L+V I P ++R ++++++ Sbjct: 704 GELFKENTTNDTRRTELLVMITPRVVRKQSELQNITQK 741 >UniRef50_Q0BZ85 Type II secretion system protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZ85_HYPNA Length = 694 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 150/604 (24%), Positives = 281/604 (46%), Gaps = 79/604 (13%) Query: 32 FNNADIRQFV-EIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 F NA I + E++G+ G + IDPSV G+I++R + + + + L L G+ + Sbjct: 103 FRNAPIDAVLNEVLGERFGLSYSIDPSVTGSITLRLDGILTPDQAVAGMDAALRLQGFEI 162 Query: 91 ITLDNGFLKVVRSANVKTS---PGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQM 147 + F+ + R + S P + + G L ++ + ++ + + M Sbjct: 163 VESGGNFV-IARVGQFQGSVSKPVFLQPNDVLPPGTSLA--VLQIRYASVSEVTAIAKSM 219 Query: 148 MDAGSVGNVVHY--EPSNVLILTGRASTINKLIEVIKRVDV--IGTEKQQIIHLEYASAE 203 + +++ Y + ++L+G ++ ++++K +DV + + +I + AS E Sbjct: 220 L----AEDLIRYGDDARGFVVLSGDPEQVSAGVQLLKSLDVNWLSSVSTALIPVVNASPE 275 Query: 204 DLAEILNQLISESHGKSQMP-ALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE 262 ++A L ++S G S +P L +V ++ SL ++AR+ I L K + Sbjct: 276 EIASDLEPILSRLGGVSVVPLERLQTLMVISRQRESL-----DQAREWIARLDKGARPQL 330 Query: 263 SEEGNTRVYYLKYAKATNLVEVLTGVS--------------EKLKDEKGNARKPSSSGAM 308 + VY +Y A +LV + G S K + +PS + A+ Sbjct: 331 MR--DVLVYEARYVNAEDLVALTEGGSASSSGFTTSAFNEPRKTSGRREVTDRPSETAAL 388 Query: 309 -------------DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 ++++I D N++V E L+ +++ LD + QVL+EA IV Sbjct: 389 PGDTFSEPGTSLFESLSIRVDPGRNAVVARGASVELESLSELLSLLDKPKRQVLIEATIV 448 Query: 356 EVQDGNGLNLGVQW-ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 EV +G +LGVQW ++ + FT+TG + D+ S Sbjct: 449 EVSLTDGTSLGVQWDLVQDRLSATFTDTG------------------------SGDLTSL 484 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 + G++ + N D ++ ALA+ + +I+++P ++ L+N+ A VG VP+++ S + Sbjct: 485 FPGVSVSYINTDIAAVINALAATSDVEIVSSPRMLVLNNETARLQVGDQVPIITQSAVSV 544 Query: 475 GDN---VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRT 530 D V N+ + G L VTP++ G V ++I QEVS V ++ S++ PT + R+ Sbjct: 545 SDPGAPVVNSTTYRDTGVILTVTPRIRAGGMVEVDISQEVSGVSETTTSSIDSPTISQRS 604 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 IQ+ + V G T VLGGL+ + +P+L D P++G FR T+ + L+V I Sbjct: 605 IQSVLAVPDGSTAVLGGLMSSTRSYSRTGIPILKDTPVLGAAFRSTNQSERRTELIVLIE 664 Query: 591 PTII 594 PT++ Sbjct: 665 PTVV 668 >UniRef50_A6DJN7 Secretion protein XqhA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJN7_9BACT Length = 738 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 152/620 (24%), Positives = 280/620 (45%), Gaps = 79/620 (12%) Query: 32 FNNADIRQFVEIVGQHLGKTILIDPSVQGTI--SVRSNDTFSQQEYYQFFLSILDLYGYS 89 +N ++ + Q L L+DP V+G + S+ ++ + + ++ F +L Sbjct: 116 LDNVELGVVINEFSQVLSFQYLVDPGVKGFVKSSISLENSMTVYDAWKLFEQVL------ 169 Query: 90 VITLDNGFLKVVRSANVKTSP----GMIADSSRPGVGDELVTRIV-PLENVPARDLAPLL 144 ++N + + + ++ P A +S PG V + L+N+ A + P+L Sbjct: 170 --YINNAYASIDEAGIIRVFPLTKIAQDALASVPGQAQGNVNIVYYSLQNITAAEALPIL 227 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYA---S 201 + M A + +V+ SN L++ ++ +++L +++ +D G I S Sbjct: 228 KPFMSANASASVI--PSSNALLIVETSANMDRLNTILQTMDANGQSNWPQIAYRCRFIDS 285 Query: 202 AEDLAEILNQL----ISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA-RQRITSLLK 256 A LAE+ + + S + G++Q + A I R ++ S P A + ++ Sbjct: 286 AVLLAELQSAIPVLGFSLAAGENQGAGVKMASI---DRMQIIVASAPSGAVLNEVYKWIQ 342 Query: 257 SLDVEESEEGNTRVYY--LKYAKATNLVEVLTGV---SEKLKDEKGNARKPSSSGAM--- 308 LD ES EG T+V+Y +++ + +LV L S + NA +SS A Sbjct: 343 ILDTAES-EGATKVFYYPVRHGISADLVAALQLFFPNSANAASPQTNASNSTSSRASTNN 401 Query: 309 ------------------------------DNVAITADEQTNSLVITADQSVQEKLATVI 338 + V I D + N LVI + ++ Sbjct: 402 TNNRTTPNRTTTNRNTTNSSDVTSIKSLFEEPVTIFEDSRRNQLVIRTKPKTYSMVKAIL 461 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKK 398 LD QV+++ VEV+ G GL G ++A + +G+ + ++ + Sbjct: 462 RHLDAPAMQVMIQVTAVEVELGEGLEFGFEYAATDKFGSGDNESGVGVGSSTADTPSFGP 521 Query: 399 NGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASF 458 GG+ +P + G+ F + A+A ++ +++L TP I+TL+ + A Sbjct: 522 PGGL---DPGISLLLQSAGVDNEF------AFVQAVAGDSSSELLFTPHILTLNGEEAEI 572 Query: 459 NVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS-VDSS 517 N+GQ+VPV +G+ +TS +N F +E ++ G L+V PQV+ V L+ E +SS V+ S Sbjct: 573 NIGQNVPVRAGTTSTSSNNDFEQIEYRSTGVLLRVLPQVSADKYVTLDTEIVISSIVEQS 632 Query: 518 SNSTL--GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRY 575 L P+FN + +L+K ET++LGG++ + E S VP L DIP +G LF+ Sbjct: 633 PEEVLIDSPSFNENKVTTKLLIKNNETILLGGIIQKVASESTSGVPFLKDIPGIGFLFQS 692 Query: 576 TSTERAKRNLMVFIRPTIIR 595 +T ++ L++FI+ T+I Sbjct: 693 ATTGSREKELVIFIKATVIE 712 >UniRef50_Q15QU6 Type II and III secretion system protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QU6_PSEA6 Length = 711 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 161/637 (25%), Positives = 278/637 (43%), Gaps = 75/637 (11%) Query: 32 FNNADIRQFV-EIVGQHLGKTILIDPSVQGT---ISVRSNDTFSQQEYYQFFLSILDLYG 87 FNN I ++ EI G LG +I+PS++ +++R N Q+ Y+ L YG Sbjct: 110 FNNMPIPVYINEIFGNQLGLNFVIEPSLKNAEDLVTMRLNQAVDQKNLYELATQTLKSYG 169 Query: 88 YSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV--GDELVTRIVPLENVPARDLAPLLR 145 + +N L +P +I+ + P V + + PL++V + L Sbjct: 170 VTTSIKNNAILFSFSENAGNETPLLISGRTLPEVPSNSRPLFYVYPLQSVTTPMIRSWLS 229 Query: 146 QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ--QIIHLEYASAE 203 QM + + N LI G I + + K +D + +II + Sbjct: 230 QMFPKKEL-EIKEDIYQNALIFIGPNRAIEQAVAAAKLLDKPAMQDMFSRIIRPTLSDVN 288 Query: 204 DLAEIL-NQLISESHGKSQMPALLSAKIVADKRTNSLII-SGPEKARQRITSLLKSLDVE 261 DLA L N L +E + Q + +++A N L++ + E + K+L+ E Sbjct: 289 DLANNLENVLKAEGYAVRQSDGASAIRLLALSSVNQLVVFAKSENVLNHVIDWAKTLETE 348 Query: 262 ESEEGNTRV--YYLKYAKATNLVEVLTGV---------SEKLKDEKGNARKPSSSGAMDN 310 + ++ + + Y ++ +AT++V++L + S+K N P +S D Sbjct: 349 QHKKVDKGLFSYPVQSTQATHIVDILNSLGVADYKSNNSDKSNTTNSNNSAPRTSNYPDA 408 Query: 311 VA------ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN 364 + DEQ N+++ + ++ VI +LD A V+VE I+ EVQ + + Sbjct: 409 LEEDVKGRYAVDEQLNTILYSGSGKDWLQILPVIKKLDKPAASVMVEVILAEVQLNDSED 468 Query: 365 LGVQW-ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 GV+W AN ++G T++ + GG+ G+ A F Sbjct: 469 TGVEWLANSSLGRFGITSSTI---------------GGL--------------GLGASGF 499 Query: 424 N------GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL-SGSQTTSGD 476 N G +L N K +I + P ++ AS +VG ++PV+ S SQ+T+ Sbjct: 500 NMTLDSAGQTRAMLNLFYKNEKANIRSRPRLMVKSGGEASIDVGNEIPVITSNSQSTTDS 559 Query: 477 N--VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQN 533 + V T+ + G L+V P V+ V +EI QE+S +S+S + PT R I Sbjct: 560 DAVVLQTISYRKTGVLLEVKPTVHASGFVDIEITQELSEATETSSSDIDSPTILNRKIST 619 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 V ++ G +V+LGGL+ + VP+LG +P++G+LF S + + LM+ I P I Sbjct: 620 TVTLRDGGSVLLGGLISSTTSTGTQGVPILGRLPMIGKLFSTDSNAQDRTELMIMIIPYI 679 Query: 594 IRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSE 630 + D L+ E Q+ RID S +VG + Sbjct: 680 LNSPDEAEQLTDEL-------QKARIDKLSDGMVGKK 709 >UniRef50_A4A016 General secretion pathway protein D (Precursor) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A016_9PLAN Length = 1199 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 138/501 (27%), Positives = 236/501 (47%), Gaps = 69/501 (13%) Query: 162 SNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAEDLAEILNQL--ISESH 217 SN L++ +++ + +I+R+D + + QI + A LA +L L + E Sbjct: 588 SNALVVRAPKDSMDLIGALIQRLDSQPSAESQIKVFTIVNGDATQLATMLETLFGLDEGT 647 Query: 218 GKSQMP---------ALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNT 268 + Q P L+ + D RTNS+I SGP + + ++L LD ++ ++ Sbjct: 648 TQGQQPFAIGAGGDNTLVPIRFSVDSRTNSIIASGPASSLAVVEAILLRLDQDDVQQRQM 707 Query: 269 RVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR-KPSSSGAMDNVA----ITADEQTNSLV 323 V LK + A + E LT E L+ E + P+ + + VA + + +NSL+ Sbjct: 708 LVVRLKNSNALLVAESLT---ELLQTESQLQQIDPTLTSSFQQVAREVIVVPETFSNSLI 764 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN----GLNLGVQ----WANKNVG 375 ITA +++ ++ LD R V ++ +I +V+ G G G+Q + V Sbjct: 765 ITATPRYFKQIVKIVEELDARPPMVSIQVLIADVRLGKIEELGFEFGLQDSLLFDRSTVS 824 Query: 376 AQQFTNTGLPIFNAA------------------QGVADYKKNGGITSANPAWDMFSAYNG 417 + Q + G NAA QG++D G+ NPA Y G Sbjct: 825 SGQL-DPGYNFNNAALGNSSSAASLATASAVGSQGLSDL----GLGRTNPAL----GYGG 875 Query: 418 MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN 477 + VL+ AL +N+ ++LA P ++T+DN+ A VGQ VP ++ +Q T+ Sbjct: 876 FVFSAASESVNVLIRALQQDNRMEVLARPHVMTMDNQPAFIQVGQRVPYITDTQVTNQGT 935 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS-----------SVDSSSNSTLGPTF 526 V N++ + G L V P+++ V++ ++ E S S++ + + P Sbjct: 936 V-NSITLENTGVILNVIPRISPDGMVVMYVQAERSEVGNEADGIPISINQNGDVIRAPRI 994 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 NT+T V ++G+T+VLGGL+ + +VPLLGDIP+VG LFRY S + + LM Sbjct: 995 NTQTATTTVSARSGQTIVLGGLIQKRTTVVSRRVPLLGDIPVVGSLFRYDSFDGDRSELM 1054 Query: 587 VFIRPTII-RDDDVYRSLSKE 606 + + PT++ D DV R +E Sbjct: 1055 IILTPTVVDSDQDVERVREQE 1075 Score = 42.4 bits (98), Expect = 0.053, Method: Compositional matrix adjust. Identities = 48/221 (21%), Positives = 103/221 (46%), Gaps = 31/221 (14%) Query: 149 DAGSVG--NVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH---LEYASAE 203 DAG +G + E +V+++ G + ++ +I ++ + E Q +I L +A++E Sbjct: 320 DAGLIGPVQIEFLEGLDVIVVRGHRRDVERITRIINDIERLSAETQPVIEVRELLHANSE 379 Query: 204 DLA----EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD 259 +A ++ L+ +G+ + L R N++++ G +++ I L++ LD Sbjct: 380 AVAATILQLYEDLLQTRYGQVSITPL--------GRPNAILLIGRQQSVDGILDLIEKLD 431 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG-NARKPSSSGAMDNVAITADEQ 318 E RV+ LKY + + T V+E + N R V TAD + Sbjct: 432 QPVGPERMLRVFQLKYLSSAD---AQTRVTEFYAEPVNLNPR----------VRSTADYR 478 Query: 319 TNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 +N+L++ A ++ +I ++D+ A+ +E + E+++ Sbjct: 479 SNALIVQASPRDMAEVEYLIRQIDVPAAESTLELKVFELRN 519 >UniRef50_A0LPH6 General secretion pathway protein D n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPH6_SYNFM Length = 793 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 107/309 (34%), Positives = 160/309 (51%), Gaps = 32/309 (10%) Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW- 369 V I DE N++V+ A+ + K+ I LDI VL+E II EV G++W Sbjct: 486 VMIIPDEVNNAIVVRANATDYAKIKKTIEALDILPRAVLIEVIIAEVALTKDFEYGLKWY 545 Query: 370 -ANKNVGAQQFTNTGLPIFNAAQGVADYKKN-GGITSANPAWDMFSAYNGMAAGFFNG-- 425 ++ VGA G N GV+D N GI+SA GMA + + Sbjct: 546 FSHAEVGA----GVGQGSLNGLGGVSDIALNLAGISSAG----------GMALAWVSNAK 591 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT----TSGDNVFNT 481 D +L+ L+S K IL+TP+++ DNK A+ VG PV SGS T T+ D VF+T Sbjct: 592 DMAGVLSWLSSKTKVKILSTPTLLATDNKEAAIQVGGRTPVPSGSYTGGTSTTLDTVFST 651 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-----PTFNTRTIQNAVL 536 +E + GT L VTP +N G V LE+EQ + V +N+T+G PTF R ++ +L Sbjct: 652 IEYEETGTILTVTPHINAGGLVRLEVEQTIRRV--GANATVGVNNTAPTFTERNLKTTLL 709 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII-- 594 + G TVV+GG++D+ ++ + P+L D+P++G LF R + L++ I P ++ Sbjct: 710 AQDGSTVVIGGIIDEIDRDTTTGAPMLVDVPIIGPLFGQKGKSRERTELLIAITPRVVER 769 Query: 595 RDDDVYRSL 603 R D R Sbjct: 770 RGSDSLREF 778 >UniRef50_Q89HG9 Blr6022 protein n=3 Tax=Bradyrhizobium RepID=Q89HG9_BRAJA Length = 793 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 113/341 (33%), Positives = 183/341 (53%), Gaps = 22/341 (6%) Query: 297 GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 G K +G + NV ITAD N++++ A+Q Q + I ++D + Q+ +EA I E Sbjct: 456 GGGAKAGPNGILQNVRITADVTNNAVLVYANQESQRIVEQTIRQIDRPQRQIAIEATIAE 515 Query: 357 VQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT--SANPAWDMFSA 414 V + LN GVQ+ + +Q+ + I N GV++ G T ++N A Sbjct: 516 VTLNDQLNYGVQFF---LASQKGS-----ISNTISGVSNSATIGSNTEPASNAVNAAAGA 567 Query: 415 YNGMAAGFFNGDWG------VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS 468 G A FN G V+L AL +L+ PS+V LDN+ A+ VG VP + Sbjct: 568 LLGRALPGFNFLIGAENSPRVVLDALHGITNVKVLSNPSLVVLDNQAATLQVGDQVPFST 627 Query: 469 GSQT--TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF 526 G+ T T+ + V NT++ K G L+V P+ N V+L+IEQE+SSV + S ++L PT Sbjct: 628 GTATVLTANNTVVNTIDYKNTGIILRVLPRANANGNVVLDIEQEISSVAAGSANSLTPTI 687 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 + R +++++ V +G+TV+L GL+ + Q +P+L IP +G F + +T RA+ L+ Sbjct: 688 SQRRVKSSIAVTSGQTVLLAGLISETENRQRQGLPILDSIPGMGDAFSHQTTARARTELI 747 Query: 587 VFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALV 627 +FIRPT+I+D +++E R + R+ G S +V Sbjct: 748 LFIRPTVIKDGVDAHVIAEE----MRTKMNGRLVGTSNPVV 784 Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 20/265 (7%) Query: 28 YGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 Y NF NA + +++ G L IDP VQGT+++ S + + + L + Sbjct: 120 YDLNFENAPVATVAKVILGDVLNVGYTIDPRVQGTVTLASVRPVPKADALYVLENALRMS 179 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 G +++ G+ + + PG I S G + +VPL V A+++ LL Sbjct: 180 GVALVRDRTGYRLLPAP---EAGPGGIDRSLNAAAGQGIT--VVPLRYVSAQNIFKLL-- 232 Query: 147 MMDAGSVGNVVHYEPS--NVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHLEYASA 202 DA V S N +I++G S ++ I D Q I + +S Sbjct: 233 --DAFGVKASTMRPDSARNTVIVSGSGSDRATAVDTILSFDADWMRGQSVGIFPVRNSSP 290 Query: 203 ED-LAEILNQLISESHGKSQMPALLSAKIVADKRTNS-LIISGPEKARQRITSLLKSLDV 260 E ++EI + S G SQ K R NS L++S + +R + + LD Sbjct: 291 EPVISEIEKIMDSGDGGISQN----VIKFQPISRLNSILVVSQKPEYLKRAQTWIARLDR 346 Query: 261 EESEEGNTRVYYLKYAKATNLVEVL 285 ++E N + Y L+Y + +V +L Sbjct: 347 SDTEGVNLKSYPLRYGNSKLIVALL 371 >UniRef50_B5JLH7 Bacterial type II and III secretion system protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLH7_9BACT Length = 736 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 185/714 (25%), Positives = 308/714 (43%), Gaps = 138/714 (19%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFN---------NADIRQFVEIVGQHLGKTILIDPS 57 + C L AAL P G E+ + N + +++ +EI+ + G++IL P Sbjct: 4 VACGLAAAL--PLQGQDTTERTAPDRNTVVESYKVVDQELQGVLEILSEMTGRSIL-RPQ 60 Query: 58 VQGT--ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKT-SPGMIA 114 T I+ S + E S+L L V L FLKVV ++T +P ++ Sbjct: 61 ALPTPKITFDSGGPITIGELILALESLLSLNDIGVSPLGERFLKVVPLNEIRTEAPELVI 120 Query: 115 DS--SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAS 172 S R G ++V+++ L+++ ++ ++ + G +++ ++ SN +I+T S Sbjct: 121 SSLAERQSSG-QVVSKLFRLQHLDSQTFQQQIQPFLSPG-FSSIIPFQNSNAVIVTDTIS 178 Query: 173 TINKLIEVIKRVDVIGTEKQQIIH--LEYASAEDLAEILNQLISESHGK----------- 219 + +L V+ VD + + L++A A ++A+ + Q+I ++ + Sbjct: 179 NLQRLEYVVGEVDKPSRLNIEPVFYTLQFAQASEVAQQIQQMIEDARNRFGDQNNSNTGR 238 Query: 220 -------------------------SQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 SQ+ + I AD RTN +II + + Sbjct: 239 VNNNSGNVPPPVPPGVGGELEGGSISQILFGSNTAISADDRTNQIIIMTAPTNLEFFEGI 298 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTG-VSEKLKDE-----------------K 296 ++ LD++ V LK+A AT + +L+ VS K K++ Sbjct: 299 IQKLDIKADPSTRIEVIPLKHADATEVASLLSQFVSGKTKNDTNDRTNSPGNTNTRSGRS 358 Query: 297 GNARKPSSSGAMDN---------------------------VAITADEQTNSLVITADQS 329 G A P+ GA N + I ADE++NSLVI+ +S Sbjct: 359 GGAGSPTFGGANQNDTPVRETLGAGAGSSVGEDRDSQFSTFMTILADERSNSLVISGTRS 418 Query: 330 VQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNA 389 + + ++ ++DI QV +E II EV N+N G + G+ F+ Sbjct: 419 DLDLMTVLVNKIDILLPQVRIEVIIAEVS-----------LNENEGLSR----GMDAFSM 463 Query: 390 AQGVADYKKNGGITSANPAWDMFSAYNGMAAGF---FNGDWGVL--------LTALASNN 438 D + IT P D A N + G FN + GV+ L SN+ Sbjct: 464 TYAEQD-DGSANITIPGPGDDA-PAINFLGLGLDGSFNYNDGVISGLTLNGILNTARSNS 521 Query: 439 KNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVF-NTVERKTVGTKLKVTPQV 497 +L+ P++VT NK A+ V + P+++ SQT+S + F V+ + +G +L VTP + Sbjct: 522 NVQLLSVPTLVTTHNKEATIVVAEARPIVTSSQTSSISDTFRQNVQYEDIGIELTVTPLI 581 Query: 498 NEGDAVLLEIEQEVSSVDSSSNSTLG----PTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 D + LEI+Q++ D S T+ P R + V V E VVLGGL + Sbjct: 582 GPNDVIQLEIDQKID--DISGKVTIDGNDQPIIGRRQATSYVSVANHELVVLGGLQRNRV 639 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR-DDDVYRSLSKE 606 + SK+ LG+IPL+G LF S E K L+VFIRP +IR DDV + SK+ Sbjct: 640 TKGRSKMSFLGEIPLLGGLFNRRSDESVKTELLVFIRPEVIRTTDDVNQDASKK 693 >UniRef50_B9XBV8 Type II and III secretion system protein n=1 Tax=bacterium Ellin514 RepID=B9XBV8_9BACT Length = 612 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 130/431 (30%), Positives = 194/431 (45%), Gaps = 58/431 (13%) Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 N I+ P RIT D E TRV LKYA TN+V +TGV L+D++ Sbjct: 200 NLTIVDDPRTKIARITVK----DPAAPEPLVTRVIQLKYANVTNIVLNVTGV---LQDKR 252 Query: 297 GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 + AD +T+ LV+ A + ++A+LD QVL+EA +VE Sbjct: 253 SR--------------VAADVRTSQLVVLATDRELTAVDELVAKLDTATKQVLIEARLVE 298 Query: 357 VQDGNGLNLGVQW-----------ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSA 405 GV W N ++ A FT P G D + T Sbjct: 299 TSKNPTTAKGVDWTGTAAAQNVRFGNNSILAAPFTRGTPPTPANPFGTPDQQAVPS-TIL 357 Query: 406 NPAWDMFSA--YNGMAAG--FFNGDWG-VLLTALASNNKNDILATPSIVTLDNKLASFNV 460 +P M +A +NG F N D +L+ L ++N +L+TP VTLDN+ A+ +V Sbjct: 358 DPTQPMIAANTHNGFLPNTFFLNADGASAVLSFLNTDNDAQVLSTPRAVTLDNETATLSV 417 Query: 461 GQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS 520 + P+ + T G + V VGT LKVTP+++ + L + EVSSV + Sbjct: 418 TRAQPIFKTTAGTQGSPGGSEVTYTNVGTILKVTPRISANKMISLRVIPEVSSVAGTDRK 477 Query: 521 TL------GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFR 574 + F+ R I VL+ +G T+V+GGL+ D + KVPLLGDIP +G FR Sbjct: 478 IVSGQINEADIFDVRHIDTQVLIPSGNTLVMGGLVSDDRTKSYIKVPLLGDIPYLGAAFR 537 Query: 575 YTSTERAKRNLMVFIRPTIIRDDD--------VYRSLSKEKYTRY------RQEQQQRID 620 + S + K+NL++F+ PTI+ +D + L E T + + + + Sbjct: 538 HESKTQNKKNLIIFVTPTIVETEDFQPTQTDFLKHKLPDENSTDFGAWDSGKPQDWSNLF 597 Query: 621 GKSKALVGSED 631 GK K S+D Sbjct: 598 GKKKTATDSDD 608 >UniRef50_B0T7N8 General secretion pathway protein D n=1 Tax=Caulobacter sp. K31 RepID=B0T7N8_CAUSK Length = 681 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 152/632 (24%), Positives = 281/632 (44%), Gaps = 84/632 (13%) Query: 31 NFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NF +R+F + ++G L + + GT+++ + ++ + L G + Sbjct: 83 NFPGVGVREFAQAVLGDILHLPYAVSAAASGTVTLVTPRPIARADVLPAVEEALRNVGLA 142 Query: 90 VITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP-LLRQMM 148 +++ D ++ + + + G+ + +PG G E V R P L+ ++ Sbjct: 143 LVSRDG--VQTIMTLGDARAQGLTVGADQPGFGSETVA---------LRFAGPQALKTLL 191 Query: 149 DAGSVGNVVHYEP-SNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHLEYASAEDL 205 D G + +P +N L+L+G A + +++++ DV + + ++ A + Sbjct: 192 DPIVPGVITSADPATNTLVLSGSAGQRRAVRDLVQQFDVDWLKGMSFGLYVPKHTDARLI 251 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLLKSLDVE-ES 263 A L++LI+ P ++VA ++ N ++ IS + + + ++ LD E +S Sbjct: 252 APELDKLINAPGS----PMAGRVRLVAMEKLNGIVAISSQPQYLEDVNRWIEVLDREGQS 307 Query: 264 EEGNTRVYYLKYAKATNLVEVLT-------GVS-----------EKLKDE---------- 295 E VY ++ +A++L VL G S ++L E Sbjct: 308 TERRLFVYRVQNGRASDLSRVLASAFGRGGGSSAAAPGGNRPALDRLGVEAAASPLLAPS 367 Query: 296 -----KGNARKPSS----SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 G + P++ G D + T+DE N++V A + + +LD+ Sbjct: 368 NGQTLPGQSPAPAAPDMAGGPADGLTFTSDETNNAVVAYATPREYALIEDALRKLDVVPL 427 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QV++EA++ EV + L G QW F +G + I S Sbjct: 428 QVVIEAVVTEVSLNDALRYGSQW---------FIRSG--------------DDRAILSRG 464 Query: 407 PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 D S + G L AL+S ++L+ P+++ L+N+ AS VG VPV Sbjct: 465 KTADPASTFPGFTYLLNRSSIAATLDALSSVTHVEVLSAPNLMVLNNQTASLEVGDQVPV 524 Query: 467 LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPT 525 +GS S +V +++E + G LK+TP+VN G VLL+I QEVS V + +ST+ PT Sbjct: 525 STGSALNS-SSVISSIEYRDTGVLLKITPRVNSGGLVLLDIAQEVSDVSPTLSSTIDSPT 583 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 + R I ++ V+ G+TV LGGL+ D +K + VP L +P++G L R + L Sbjct: 584 ISVRKIATSIAVQDGQTVALGGLIRDNNKRLRNGVPFLSAVPVLGALAGSRDNSRERTEL 643 Query: 586 MVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 +V + P ++R+ ++++ E + R Q Sbjct: 644 LVLLTPRVLRNSGDIQAVTDELREKIRSISPQ 675 >UniRef50_Q82WH1 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Nitrosomonas europaea RepID=Q82WH1_NITEU Length = 697 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 159/608 (26%), Positives = 273/608 (44%), Gaps = 69/608 (11%) Query: 26 EQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E++ NFN ADIR +++V G+ L ++ P+VQG I++R++ S+ + L Sbjct: 88 ERFELNFNEADIRGVIDVVLGEMLKLDYVVSPAVQGRITLRTSRPVSKASLLSALEAALG 147 Query: 85 LYGYSVITLDNGFLKVV--RSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 +VI D + V+ A + P S+ P V I+PL + A D+ Sbjct: 148 TVS-AVILKDEQTISVLPWSEAPQRVRPAQRFASAMPPTPGYAV-EIIPLRYINANDMQA 205 Query: 143 LLRQMMDAGSV--GNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYA 200 +L + G V + H L++ G + ++ I+ DV L Sbjct: 206 ILDSFVPKGIVLQADTRHGH----LVVAGSSQDRGAILHTIENFDVDWLNG-MTFALYKL 260 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKI--VADKRTNSLIISGPEKAR-QRITSLLKS 257 S L I+ +L G+ L + +I V +R +++ K+ + + ++ Sbjct: 261 SQSRLEAIVTELREIFQGEID---LFTTRIHLVPLERMQAVLGVAQNKSDLELLREWIER 317 Query: 258 LDVEESEEGNTRVYYLKYAKATNLV----EVLTG--------------VSEKLKDEKGNA 299 LDV + VY ++ A +LV +VLTG S + + A Sbjct: 318 LDVSKLGAQRIFVYNVQNGNAKDLVAPLRQVLTGEMQATTASGTTVSPTSTPMSTPQMPA 377 Query: 300 ------RKPSSSGAMDNVA-ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEA 352 +PS SG+ NV + A E+ NSL+ + + + ++D+ QV++EA Sbjct: 378 AAPSLSAEPSISGSQTNVGRLVAIEENNSLMFYGTEDEFRVIQEALKQIDVLPRQVMIEA 437 Query: 353 IIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMF 412 + EV N L GVQW F++ + T F Sbjct: 438 FLAEVTLNNNLRYGVQW----------------FFDSGENTVTLSA----TDVGSVASQF 477 Query: 413 SAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS-GSQ 471 ++ + AG N ++L AL S + IL+ P I L+N+ AS VG VP+++ SQ Sbjct: 478 PGFSYIYAGKANAR--IVLNALQSKTEVKILSAPKISVLNNQKASLQVGDQVPIVTQTSQ 535 Query: 472 TT--SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNT 528 T SG V NT++ + G L+V P+VN+ V+L++ QEVS V +++S + PT Sbjct: 536 GTVVSGAPVINTIQMRDTGVILEVIPRVNDNGNVILDVTQEVSEVAQTTSSGIDSPTIQR 595 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 R I + + + G TV LGGL+ + S VPL+ D+P++G LF+ +++ + L+V Sbjct: 596 RKIHSVIATRDGFTVALGGLIRENGSAGNSGVPLIKDVPVIGNLFKSNTSDIRRTELVVL 655 Query: 589 IRPTIIRD 596 + P ++R+ Sbjct: 656 LVPHVMRN 663 >UniRef50_D0X4T6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X4T6_VIBHA Length = 715 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 160/599 (26%), Positives = 268/599 (44%), Gaps = 82/599 (13%) Query: 37 IRQFVEIVGQHL-GKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDN 95 I Q I+G +L G T + +VQ IS R +Q+ Q +S+ G VI Sbjct: 154 ILQVDYILGDNLQGVTTPVTLNVQNDISPRRLFDLTQELLVQRGISVQARDGLYVIM--- 210 Query: 96 GFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGN 155 LK ++ G DS G D V ++VPL+ + ++R++ Sbjct: 211 -NLKQDGKSSAVLGYGSTPDSVPDGAID--VVQVVPLKFTFSNSTMGVIRELTS------ 261 Query: 156 VVHYEP---SNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAEDLAEILN 210 V P VLIL+G+ S + + IE++K +D + I + L Y + ED + Sbjct: 262 -VRVSPDLRQGVLILSGKRSEVVRAIELLKILDAPSNTSKHIGLVKLRYITTEDFIATVT 320 Query: 211 QLISESHGKSQMPALLSAKIVADKRTNSL---------IISGPEKARQRITSLLKSLDVE 261 +L+ Q +++ V DKR + + + + + +R+ +D Sbjct: 321 ELL-------QNEGIVADGGVNDKRLSMVQIPQLGALAVFASEDSFIKRVRYWAAQMD-R 372 Query: 262 ESEEGNTR--VYYLKYAKATNLVEVLTGV--SEKLKDEKGNARKPSSS----------GA 307 S+ + R +Y KYA+A ++ + L+ + L +K +A K SS + Sbjct: 373 PSQGADLRYFIYQPKYARAADIGDSLSKLIGGRSLSVQK-SADKDSSKIEVNSQSSNSVS 431 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 D +++ DE+ N+L+ + + + L +IA+LD+ QV++E I EV + GV Sbjct: 432 NDKLSLVVDERANTLIFRSSSTEYQALLPLIAQLDVMPKQVILEMTIAEVTMTDEFKFGV 491 Query: 368 QWA--NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 +WA N N A GL K GG W +G Sbjct: 492 EWAFSNGNFSASTKDAFGLD-----------KVGGGFIK----W-------------MSG 523 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 D + L A SNN +I++ PS++ D A+ NVG D+PV+ + T S + V +VE + Sbjct: 524 DDFINLQAFESNNNVNIMSKPSLLVRDGVEANINVGTDIPVVGQTTTDSNNGVTRSVEYR 583 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSS-VDSSSNSTLGPTFNTRTIQNAVLVKTGETVV 544 G K+ VTP +N V + I QE S+ VD ++ P+ R+I V+ ++G+TV+ Sbjct: 584 KTGVKVAVTPTINAQGIVSMVISQENSNQVDGGTSVEGNPSIFDRSITTEVVAESGQTVI 643 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 LGGL+ + S VP LG +P+VG LF + + K L++ + P I+ + L Sbjct: 644 LGGLISENVTNNGSAVPFLGSLPVVGGLFGTKTDNKTKTELVIMVTPRIVESSSQWDDL 702 >UniRef50_B8ESI9 General secretion pathway protein D n=1 Tax=Methylocella silvestris BL2 RepID=B8ESI9_METSB Length = 805 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 104/312 (33%), Positives = 169/312 (54%), Gaps = 20/312 (6%) Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 + V I AD NS+VI A+Q + + +LD + QV ++ I EV + LN GV Sbjct: 484 LPGVRIMADAANNSVVIYANQESYRIIEKALEQLDRPKLQVAIDLTIAEVTLNDTLNYGV 543 Query: 368 QW----ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 Q+ +N +GA N G + N A GV + GG+ SA F+ G A Sbjct: 544 QFFLGSSNLGLGA----NNGF-VTNTAAGVP-LAQTGGVASAAGTLPGFNLTIGNAL--- 594 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNT 481 ++ AL +L+ PS+V +DN++A+ VG ++P+ +GS T ++ + V NT Sbjct: 595 --SPRAIINALHQYTDVKVLSNPSLVVVDNQVATLQVGDEIPIQTGSATVLSANNAVVNT 652 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGE 541 ++ K G L+V P+VN V L++EQE+S + + S LGPTF+ R +++++LV +G+ Sbjct: 653 IDYKNTGIILRVQPRVNFNGNVSLDVEQEIS--NQAGTSALGPTFSQRKVKSSILVASGQ 710 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN-LMVFIRPTIIRDDDVY 600 TV+L GL+ D + +P+ IP++G LF +S R L++FIRP IIRD Sbjct: 711 TVLLAGLISDGVNGTKAGIPVADQIPVLGNLFNNSSNRLVSRTELIIFIRPQIIRDGVDA 770 Query: 601 RSLSKEKYTRYR 612 +++E ++ R Sbjct: 771 SFVAEELRSKLR 782 >UniRef50_O80264 Similar to Gene IV protein :Acc# A04268 n=3 Tax=root RepID=O80264_9VIRU Length = 500 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 114/365 (31%), Positives = 185/365 (50%), Gaps = 55/365 (15%) Query: 234 KRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVE--VLTGVSEK 291 K N+ +I +A++ IT + L R Y++ +K ++LV+ + SE Sbjct: 129 KDGNAYVIKIAPEAKEVITPAIVKL---------YRFNYIRNSKLSDLVQSTLKATSSEF 179 Query: 292 LKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 +KD++ +DN ++ TN+L+++ EKL +++ +D+ + Q+ +E Sbjct: 180 VKDKQ-----------VDNYSVEILPNTNALIVSGTAQQLEKLDVLLSAIDVPQRQIFIE 228 Query: 352 AIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM 411 A+I E + G+ LGV A TN + NA++ K N I Sbjct: 229 AVITETELGDNSELGVNLQAAFDKAGFVTN----LVNASK----LKDNLFI--------- 271 Query: 412 FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 F +GD+ L+ A++ ++ +L+ P+I+ +D + VGQ+VP L + Sbjct: 272 ----------FESGDFNALVKAISGSSDTRLLSRPNILIMDRERGYITVGQNVPFLVSNS 321 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF--NTR 529 TT G +ERK VG L+VTP V GD V+L I QE SSV ++ST+ N R Sbjct: 322 TTDGGTSVQRIERKDVGVSLEVTPHV-MGDDVILVINQESSSV---TDSTIAADIITNKR 377 Query: 530 TIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFI 589 T+ V VK+G+T+VLGGL+ D + S VP+L D PL+G LFR TST+ ++ L V I Sbjct: 378 TLMTTVAVKSGQTIVLGGLISDEKRNVESGVPVLKDTPLIGGLFRSTSTKNVQKELRVVI 437 Query: 590 RPTII 594 + T+ Sbjct: 438 KSTVF 442 >UniRef50_P29041 General secretion pathway protein D n=22 Tax=Xanthomonadaceae RepID=GSPD_XANCP Length = 759 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 168/693 (24%), Positives = 290/693 (41%), Gaps = 114/693 (16%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFS 71 AA P G A + NF ++ V+ I+G LG+ +I P VQGT+++ + + S Sbjct: 79 AAAPSPTLGMASSGSATFNFEGESVQAVVKAILGDMLGQNYVIAPGVQGTVTLATPNPVS 138 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSS-RPGVGDELVTRIV 130 + +L + + + G +V + G +A S+ P R+V Sbjct: 139 PAQALNLLEMVLG-WNNARMVFSGGRYNIVPADQALA--GTVAPSTASPSAARGFEVRVV 195 Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTG-RASTINKLIEV-IKRVDVIG 188 PL+ + A ++ +L ++ V NV+ L G RA N L V I VD + Sbjct: 196 PLKYISASEMKKVLEPYARPNAI--VGTDASRNVITLGGTRAELENYLRTVQIFDVDWLS 253 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 + ++ AE ++ L ++ E +S+ P+ + + + N++++ P+ Sbjct: 254 GMSVGVFPIQSGKAEKISADLEKVFGE---QSKTPSAGMFRFMPLENANAVLVITPQP-- 308 Query: 249 QRITSLLKSLDVEESEEGNTRV--YYLKYAK----ATNLVEVLT---------------G 287 + + + + LD +S G R+ Y LKY K A L EV G Sbjct: 309 RYLDQIQQWLDRIDSAGGGVRLFSYELKYIKAKDLADRLSEVFGGRGNGGNSGPSLVPGG 368 Query: 288 VSEKLKDEKGNARKP----SSSGAM----------------------------------- 308 V L + G A + SSSGA Sbjct: 369 VVNMLGNNSGGADRDESLGSSSGATGGDIGGTSNGSSQSGTSGSFGGSSGSGMLQLPPST 428 Query: 309 ------------DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 D V ++A +TN+L++ + + VI +LD+ QV +EA I E Sbjct: 429 NQNGSVTLEVEGDKVGVSAVAETNTLLVRTSAQAWKSIRDVIEKLDVMPMQVHIEAQIAE 488 Query: 357 VQDGNGLNLGVQWANKNV--GAQQFTNTGLPIFNAAQGVADYKK-NGGITSANPAWDMFS 413 V L GV W +N +G P +A G + +G +TS Sbjct: 489 VTLTGRLQYGVNWYFENAVTTPSNADGSGGPNLPSAAGRGIWGDVSGSVTS--------- 539 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 NG+A F + +++AL +L TPS+ +N A+ NVG +P+ S S T Sbjct: 540 --NGVAWTFLGKNAAAIISALDQVTNLRLLQTPSVFVRNNAEATLNVGSRIPINSTSINT 597 Query: 474 S--GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS------------VDSSSN 519 D+ F++V+ G LKV P+V + V L+I QEVS+ + ++ Sbjct: 598 GLGSDSSFSSVQYIDTGVILKVRPRVTKDGMVFLDIVQEVSTPGARPAACTAAATTTVNS 657 Query: 520 STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE 579 + NTR ++ V+ G+T++L GL+DD + + + +P L +P+VG LF + Sbjct: 658 AACNVDINTRRVKTEAAVQNGDTIMLAGLIDDSTTDGSNGIPFLSKLPVVGALFGRKTQN 717 Query: 580 RAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 +R ++V I P+I+R+ R L+ E ++++ Sbjct: 718 SDRREVIVLITPSIVRNPQDARDLTDEYGSKFK 750 >UniRef50_A6CD16 General secretion pathway protein D (Precursor) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CD16_9PLAN Length = 1307 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 137/503 (27%), Positives = 232/503 (46%), Gaps = 72/503 (14%) Query: 162 SNVLILTGRASTINKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAEILNQLISESHGK 219 +N L++T ++ + +I + D V + ++ L+ A AE + +L S + + Sbjct: 708 ANTLVVTAPKDSLELIGALINQFDARVSSVAELKVFTLKNADAESMVTLLQSTFSADNQQ 767 Query: 220 SQM-----------PALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNT 268 + + L+ K D+RTNS++ G A Q + ++L LD +S + T Sbjct: 768 TDLGIQIAGVNDANSNLIPLKFSVDRRTNSVVAQGGADALQIVEAILLKLDGADSRKRET 827 Query: 269 RVYYLKYAKATNLVEVLTGVSEKLKDEKG-NARKP---SSSGAMDNVAITADEQ-TNSLV 323 V LK T + +V ++E L ++ A+ P SS ++ I E N+L+ Sbjct: 828 TVIQLKN---TPVADVSVAINEFLDTQRALIAQDPDLISSFELLEREVIVVPEAINNNLI 884 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ----DGNGLNLGVQ----------- 368 I+A E+++ ++ +LD QV+++A+IVEV+ D G+ LG+Q Sbjct: 885 ISATPRYFEQISNLVKQLDKEAPQVIIQALIVEVELDNDDEFGVELGLQDSLLFNRSIID 944 Query: 369 ----------------WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMF 412 N+ + +Q+ T L FN+ + N +A A F Sbjct: 945 NVLTVQQTITGQNNVTQTNQTIVSQEATPGFL--FNSINPLGTNNTNNVSNTAGQALSNF 1002 Query: 413 SAYNGMAAGFFNG--------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464 S G + F G +L+ ALA+ +L+ P I T+DN A VGQ V Sbjct: 1003 SLQRGNSDLGFGGLVLSASSESVSILIRALAAKRNVHVLSRPQIRTVDNVTAQIQVGQIV 1062 Query: 465 PVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-----N 519 PV++G T+ + +++ G L VTP+++ +++E + E S + SS + Sbjct: 1063 PVVNGVSVTAVGSANPVIQQSEAGIILTVTPRISPDGNIVMETQAEKSDFNGSSVPIFTD 1122 Query: 520 STLG-----PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFR 574 +T G P N +Q V V G+TVVLGG++ + KVP LGDIPL+G FR Sbjct: 1123 ATTGNVVESPIKNITQVQTTVSVPNGQTVVLGGMITESDTTIERKVPWLGDIPLIGIPFR 1182 Query: 575 YTSTERAKRNLMVFIRPTIIRDD 597 Y + ++ L+VF+ P IIR+D Sbjct: 1183 YDYSSTRRKELLVFLTPRIIRND 1205 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 124/264 (46%), Gaps = 31/264 (11%) Query: 110 PGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTG 169 PG + +P D+ P E R L LL+ + +G+V N+ VLIL G Sbjct: 396 PGAAQNPQQPQPADK------PAEVEKQRSLPELLQDL--SGNV-NIESVPDLGVLILRG 446 Query: 170 RASTINKLIEVIKRVDVIGTEKQQIIH---LEYASAEDLAEILN----QLISESHGKSQM 222 + +N L+++IK ++ + + IH L + ++ LAE+LN L++ + Q+ Sbjct: 447 KDEDVNALMKIIKELEKLSEGTRPDIHLLNLRHVNSTALAELLNGVYEDLVTLRAIQGQI 506 Query: 223 PALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 + KI+ + N+L+I P+ I L + LD + V+ LK A A+ Sbjct: 507 QKI---KIIPLVKPNALLILAPDTDMPSILKLAEELDQPVNPLTEFGVFQLKSASAS--- 560 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 +V T + E +E+G G + ++ + +TNS+++ A +++A +I ++D Sbjct: 561 QVATTIRE-FYNERG--------GLGTRILVSPNIRTNSIIVQAQPRDMQEVAALIQKID 611 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLG 366 + ++Q + I +++ +L Sbjct: 612 LDQSQAISRVKIFPLKNAIAADLA 635 >UniRef50_B8KPH7 General secretion pathway protein D n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPH7_9GAMM Length = 770 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 160/303 (52%), Gaps = 18/303 (5%) Query: 310 NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW 369 +V + ADE+ N+L++ AD + + +LD+ QV++EA I+EVQ + L G++W Sbjct: 468 DVRVVADEENNALMVYADGKQYGIVKEALKQLDVVATQVIIEASIMEVQLIDELRYGLEW 527 Query: 370 ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGV 429 KN GL ++Y G + + + ++ + GD Sbjct: 528 TFKN---------GLG--------SNYDGLGTLAAGAAGPAAVAGFSYTVSNSV-GDISA 569 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 +L AL+ + ++++TPS++ LDN +A +VG VPVL G T+G N + + G Sbjct: 570 VLNALSEESLINVISTPSVMVLDNHVAFISVGDQVPVLQGQTITNGGNSVQNITYRDTGV 629 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLL 549 +L V P VN G V ++IEQ V V + ++T F RTI + V V++ E+VVLGGL+ Sbjct: 630 QLSVRPSVNAGGLVTMDIEQSVIDVGAIDSATGQRAFLDRTINSRVAVRSSESVVLGGLI 689 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 + S S VP+L +IPL G LF T+T+ + L+V I P + ++D R++S E Sbjct: 690 RENSSLGDSGVPILREIPLFGSLFGTTTTDSRRTELLVIITPRALYNEDELRAVSDEMRE 749 Query: 610 RYR 612 + R Sbjct: 750 QVR 752 >UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseudomonas RepID=B1J7E4_PSEPW Length = 745 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 165/671 (24%), Positives = 297/671 (44%), Gaps = 102/671 (15%) Query: 18 PCAGHAENEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 P A E NF + I + ++G L + I V+G++S ++ ++Q+ Sbjct: 95 PPAAKDEQGDIVFNFTDQPIEAVINSVMGDLLHENYSISQGVKGSVSFSTSKPVTKQQAL 154 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS--SRPGVGDELVTRIVPLEN 134 ++L ++I G V+ A+ + ++ ++P G L R+ PL Sbjct: 155 SILETLLSWTDNAMIR--QGERYVILPADKAVAGKLVPQVPVAQPATG--LAARLYPLRY 210 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPS-NVLILTGRASTINKLIEVIKRVDVIGTEKQQ 193 + A ++ LL+ + + + +P+ NV+ L G + + I DV + Sbjct: 211 IGASEMQKLLKPFVRENAF---LLVDPARNVISLAGTPDELANYQDTIDTFDVDWLKGMS 267 Query: 194 I--IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQR 250 I L+ AS +L L +L G MP + + ++RTNS++ IS + Q Sbjct: 268 IGVYGLQRASVAELMPQLQKLFGPDSG---MPLSDMVRFMPNERTNSIVAISAQPEYLQE 324 Query: 251 ITSLLKSLDVEESEEGNTRVY------------YLK--YA----------------KATN 280 + ++++D E VY YL+ Y K T+ Sbjct: 325 VGDWIRTIDEGGGNEPQLFVYDVRNMKAADLARYLRQIYGSGQINDDKAASVAPGLKTTS 384 Query: 281 LVEV----------LTGVSEKLK---------DEKGNARKPSSSGAM----------DNV 311 L + L+G+ + D+ + +P +S A ++V Sbjct: 385 LTSLNGTGSQSGQGLSGMGMNTQASIREAPSEDDYEDTGQPEASSAESADGSVKSLEESV 444 Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 ITA + +N L++ + +++ + I RLD QV +E I+EV+ L+LGVQW Sbjct: 445 RITAQKSSNQLLVRTRPAQWKEIESAIKRLDSPPLQVQIETRILEVKLTGDLDLGVQWYL 504 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLL 431 + A ++T + + +QG GG+ + + MF + F + + V L Sbjct: 505 GRL-AGNSSSTTVANESGSQGALGA---GGVALGSAS--MFYS-------FVSSNLQVAL 551 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT----SGDNVFNTVERKTV 487 AL + +L+ PS+V L+N+ A VG ++P+ SQTT D ++VE Sbjct: 552 RALETRGLTQVLSAPSLVVLNNQQAQIQVGDNIPI---SQTTVNTSDSDTTLSSVEYVQT 608 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL--GPTFNTRTIQNAVLVKTGETVVL 545 G L V P++N G V ++I+Q+VS D S+ +T P ++R + V V++G+TV+L Sbjct: 609 GVILDVVPRINPGGLVYMDIQQQVSDADDSAVTTTQPNPRISSRAVSTQVAVQSGQTVLL 668 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL+ + + ++VP L IP +G LF TS R + L+V I P ++ + + R ++ Sbjct: 669 GGLIKQDNGQSDTRVPGLSSIPGLGWLFGSTSKSRDRTELIVLITPRVVNNPEQARQVTA 728 Query: 606 EKYTRYRQEQQ 616 + YRQ+ Q Sbjct: 729 D----YRQQMQ 735 >UniRef50_A7K3T2 Type II secretory pathway, component PulD n=2 Tax=Vibrio RepID=A7K3T2_VIBSE Length = 458 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 101/335 (30%), Positives = 168/335 (50%), Gaps = 35/335 (10%) Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 VE E ++Y+ + + T +V++++ + +++ N + A+ N + T Sbjct: 159 VETFEPSQVKLYFFENVRNTKVVDLISSMLAATQNQTLNNK------AIKNYKVEVLPTT 212 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 NS+++T ++ + + +I +D + QV +EA+I E + G+ +GV N ++ + Sbjct: 213 NSIIVTGSENQLKHIDVLIKGIDRPQKQVFIEAVITETELGDSQEVGV---NMDLALSEA 269 Query: 380 TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNK 439 P T+ A D Y G GD+ L+ A++ N Sbjct: 270 GFVSQP-----------------TAIKKAVDNLLFYEG-------GDFNALIKAVSKNQN 305 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNE 499 +L+ P++ +D + VGQ+VP L+ S+ T G N +ERK VG L+V P V Sbjct: 306 TKLLSRPNMFIMDRERGYITVGQNVPFLTSSEVTDGGNRVQQIERKDVGVSLEVVPHV-I 364 Query: 500 GDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSK 559 GD V+L+I Q+ SV SS ++ T NTRT+Q V VK +T+ LGGL+ ++ VS Sbjct: 365 GDHVVLQIMQKSDSVTDSSIASDIIT-NTRTLQTVVKVKDRQTISLGGLISQEQRDSVSG 423 Query: 560 VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 VP+L D+PL+G LFR T + L V IR TI+ Sbjct: 424 VPVLMDVPLLGALFRSEKTNTVDKELKVTIRTTIL 458 >UniRef50_C1DRT4 General secretion pathway protein D n=2 Tax=Gammaproteobacteria RepID=C1DRT4_AZOVD Length = 752 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 178/678 (26%), Positives = 301/678 (44%), Gaps = 91/678 (13%) Query: 31 NFNNADIRQFV-EIVGQHLGKTILIDPSVQGT---ISVRSNDTFSQQEYYQFFLSILDLY 86 N NN + F+ E+ G LG + I P +QG IS+R ++ + + + +L Y Sbjct: 107 NLNNFPLPAFINEVFGNRLGLSFGISPELQGKTDLISLRLSEPQTPADLFATARFVLSEY 166 Query: 87 GYSVITLDNG-FLKVVRSANVKTSPGMIADSSRPGV--GDELVTRIVPLENVPARDLAPL 143 G +V + F + ++A + P +++ + P V V + +P+ V + + Sbjct: 167 GVAVTEREGVLFFQSAQNAPNDSLPLLVSGGALPEVPMSHRPVFQQIPMRVVRSDSMVAW 226 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTI---NKLIEVIKRVDVIGTEKQQIIHLEYA 200 L+ M AGS V SN ++L G I ++ IE+ R + G+ I + YA Sbjct: 227 LKDMF-AGSSLKVSSDPLSNAVMLRGPIDLIRQASQAIELFDRPALKGSHSLAISPV-YA 284 Query: 201 SAEDLAEILNQLI-SESHGKSQMPALLSAKIVADKRTNSLIISGPEKA-----RQRITSL 254 SA++L L +++ +E + S+ P L ++ K LI+ + A RQ + L Sbjct: 285 SADELGTALVKVLQAEGYDVSENPPLGGVVVLKLKELQRLIVFAADPAILATARQWV-EL 343 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVL--TGVSEKLKD---EKGNARKPS------ 303 L E+ E G +Y ++ +A + +L G S + D N P+ Sbjct: 344 LDRQSQEQVENG-LFLYQVRNTQAAGIASMLGALGYSATIPDTGLNTSNTVTPTGASTGE 402 Query: 304 ---SSGAMDNV-------------AITADEQTNSLVITADQ-------SVQE--KLATVI 338 +SG + +V +I + + S+V+ A++ S QE KL ++ Sbjct: 403 SLATSGPIRSVTGTGANARASAPTSIAGNPEQGSVVVDANRNAIIYKGSGQEWLKLRPLL 462 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN--KNVGAQQFTNTGLPIFNAAQGVADY 396 LD V+++ ++ EV + LGV W N ++G++Q IF A G+ Sbjct: 463 EELDRPVPSVIIDVLLAEVNLNDREGLGVDWQNITGSLGSKQL------IFGTANGIGSS 516 Query: 397 KKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLA 456 N SA N G L A NN+ I ++P ++ + A Sbjct: 517 GLN------------ISALNSA------GQTKATLNAFYDNNQAVIRSSPKLMVRSGEEA 558 Query: 457 SFNVGQDVPVLSGS-QTTSGDN--VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS- 512 + VG ++PV++G+ Q+T DN + TV+ + G L + P V V L+I QE+S Sbjct: 559 TIEVGNEIPVVTGTTQSTDTDNAPITQTVQYRKTGVLLNIKPTVQASGVVDLKISQELSE 618 Query: 513 SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 S D+ + TL P N R ++ A+ ++ G +V+L GL+ + + VPLLGD+P +G L Sbjct: 619 STDTGTGDTLTPIINNRRVETALTLRDGGSVMLAGLISSSKGKGDNGVPLLGDLPWIGNL 678 Query: 573 FRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 F+ S + L+V I P ++RD D + LS+ YR EQ + S G L Sbjct: 679 FKSQSNSETRTELIVMIIPYVVRDFDEAQDLSRT----YR-EQLSLNNSDSLERRGDHRL 733 Query: 633 PVLDENTFNSHAPAPSSR 650 P PAP+ R Sbjct: 734 PPAYAPHATETPPAPAHR 751 >UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTT2_9GAMM Length = 721 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 115/387 (29%), Positives = 193/387 (49%), Gaps = 38/387 (9%) Query: 233 DKRTNS---LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 DKR + LI E A+Q +L V+E + + + +AKA ++ ++ G S Sbjct: 345 DKRKSGNVLLIAPAEEIAQQEKLALEAKQQVQELAPLQSEFFEVNFAKAEQILNLIKGKS 404 Query: 290 EKLKDEKGNARKPSSSGAM--DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 E D +G + S S + + T D +TN+L++T V E++ +++ RLDI Q Sbjct: 405 E---DGEGQSEGDSKSSGLLSERGTATVDARTNTLMVTDTAVVMEQIRSMLQRLDIPVKQ 461 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQ-GVADY-----KKNGG 401 VL+E+ IV D LG ++ + LP+ A G +D +++GG Sbjct: 462 VLIESRIVIASDDFDKQLGSRFGVNRIDP-------LPVGEGAVFGGSDTFNLQGRQSGG 514 Query: 402 ITSAN--PAWDMFSAYNGMAAGFF-------NGDWGVL-LTALASNNKNDILATPSIVTL 451 + N P F A G + G F +G+ L L+AL + K +I++TP ++T Sbjct: 515 DLNINSRPMNFNFPANAGSSTGQFAFALPTSSGNLLELELSALQAEGKGEIISTPRVITA 574 Query: 452 DNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 + K A G ++P L + + + TV K L TPQ+ D ++L++ + Sbjct: 575 NQKEAFIEQGVEIPYLEAASSGA-----VTVAFKKAVLSLTATPQITPDDRIILDLNVKK 629 Query: 512 SSVDS--SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLV 569 +V P+ +TR ++ VLVK GETVVLGG+ + + + V+K+P LGDIP + Sbjct: 630 DNVGEIFGEGEIQVPSIDTREVETQVLVKNGETVVLGGIFEHETLDSVTKIPFLGDIPGI 689 Query: 570 GQLFRYTSTERAKRNLMVFIRPTIIRD 596 G+LFR + +KR +++F+ P I+RD Sbjct: 690 GRLFRREIKQNSKREILIFVTPKIVRD 716 >UniRef50_B9XM19 Type II and III secretion system protein n=1 Tax=bacterium Ellin514 RepID=B9XM19_9BACT Length = 785 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 103/346 (29%), Positives = 177/346 (51%), Gaps = 31/346 (8%) Query: 300 RKPSSSGA---MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 ++ SSSG + N I ADE+TNSL++ A + + + ++ +LD+ AQVL+EAII+E Sbjct: 443 KRASSSGEFQILGNNKIIADERTNSLLVFASKQDMDVIKDIVGKLDVVLAQVLIEAIIME 502 Query: 357 VQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 V + +LGV + + N QG+ K + +N A +A N Sbjct: 503 VTLDDTRDLGVSYLQTSPSGN----------NYFQGIGAIKNGPFASFSNFASTATNAAN 552 Query: 417 GMAAGF-----FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 + +GF FN D+ +TA A++N+ ++L+ P I T A+ +G VP ++G+ Sbjct: 553 SLPSGFSYLAQFNNDFSATITAAATDNRINVLSRPRIQTSHAVTANLQIGDTVPYVTGTY 612 Query: 472 TTSGDNVFNTVERKT-VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS--NSTLGPTFNT 528 + ++ ++T VG L+VTP +N V+++I Q+V + + + ++ PT Sbjct: 613 FGGLNGQASSQYQQTFVGINLQVTPLINPDGLVVMDITQDVQQLGTPTIIDNNPVPTTTK 672 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 RT Q V VK +T++LGG + S VPLL +IP++G LFR TS + L+V Sbjct: 673 RTAQAKVSVKDRDTIILGGFISSTKSRSKSGVPLLMNIPVLGYLFRSTSDSNKRTELIVL 732 Query: 589 IRPTIIRDDDVYRSLSKEKYTR----------YRQEQQQRIDGKSK 624 IRPT++ + ++ + R +R+E+ +R+ K Sbjct: 733 IRPTVLPTPEAAALVATRERDRLPGVKAAEADFRKEEAKRLKQAEK 778 Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 89/180 (49%), Gaps = 7/180 (3%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGT-ISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NF D+ Q + I G+ + +T+L ++ I++++ ++ E + S+L L G + Sbjct: 180 NFPAVDVNQVLTIYGELVNRTVLRPTALPAQLITLKTQTPLTKSEAIEALNSVLALNGIT 239 Query: 90 VITLDNGFLKVV-RSANVKTSPGM-IADSSRPGVGDELVTRIVPLENVPARDLAPLLRQM 147 +I + + F+K + ++ ++ SP D S+ V++IV L+ + ++ P L Sbjct: 240 MINVGDKFVKALPQNQALQDSPEFSTGDPSQLPETGLFVSKIVQLKYLKPSEMMPALTPF 299 Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD--VIGTEKQQIIHLEYASAEDL 205 A G + E + + + + + +++EVI ++D V + +I ++YA A D+ Sbjct: 300 --AKMPGGIFPVENNQTIFIRDYSENVKRMLEVIAKLDVEVPMDYETAVIPIKYALAADI 357 >UniRef50_A4A5L7 General secretion (Type II) pathway protein D n=3 Tax=unclassified Gammaproteobacteria RepID=A4A5L7_9GAMM Length = 745 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 99/303 (32%), Positives = 157/303 (51%), Gaps = 18/303 (5%) Query: 310 NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW 369 +V + ADE+ N+L+I AD + + +LD+ QV++EA I+EVQ + L G++W Sbjct: 443 DVRVVADEENNALMIYADGKQYGIVKDALKQLDVVATQVIIEASIMEVQLIDELRYGLEW 502 Query: 370 ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGV 429 KN + G AA A + ++ N + GD Sbjct: 503 TFKNGLGNNYDGLGTLAAGAAGPAAAAGFS------------YTVTNSL------GDISA 544 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 +L AL+ + +++++PS++ LDN A +VG VPVL G T+G N + + G Sbjct: 545 VLNALSEESLINVISSPSVMVLDNHTAFISVGDQVPVLQGQTITNGGNSVQNITYRDTGV 604 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLL 549 +L V P VN G V ++IEQ V V S ++T F RTI + V V++ E+VVLGGL+ Sbjct: 605 QLSVRPSVNAGGLVTMDIEQSVIDVGSIDSATGQRAFLDRTINSRVAVRSSESVVLGGLI 664 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 + S S VP+L +IPL G LF T+T+ + L+V I P + +++ R++S E Sbjct: 665 RENSSLGDSGVPILREIPLFGSLFGTTTTDSRRTELLVIITPRALYNEEELRAVSDEMRE 724 Query: 610 RYR 612 + R Sbjct: 725 QVR 727 >UniRef50_A4SKW4 S-protein secretion component D n=2 Tax=Gammaproteobacteria RepID=A4SKW4_AERS4 Length = 719 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 150/626 (23%), Positives = 277/626 (44%), Gaps = 97/626 (15%) Query: 44 VGQHLGKTILIDPSVQG---TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKV 100 +G+ L ++D ++Q +++R + S + +L + G + + L++G +KV Sbjct: 109 LGEVLDLNYIVDQALQAKTDPVTLRVSKPVSARRLLGLIEEVLQVNGVA-LALEDGVIKV 167 Query: 101 VRSANVK-TSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHY 159 + + + T P +++ + +P + V I+P+ +P + +M+ S G V+ Sbjct: 168 IPAEKTRNTVPMLMSGAIQPALRYGKVVEIIPVYYLPLGQAITIAERMV-RDSDGTVLMQ 226 Query: 160 EPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE--YASAEDLAEILNQLISESH 217 N +++ + I+++ +++ VDV + L+ Y S E+L L + + + Sbjct: 227 NNLNAIMVVAKKEEIDRIHQLLAEVDVPNRVASHLTVLQPSYLSLEELTTDLVKALDAAG 286 Query: 218 GKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT-SLLKSLDVEESEEGNTRVY--YLK 274 M ++ ++ N+L+++ +A T K LD G+ VY +LK Sbjct: 287 VPVTMGKGMNGVVLVPMSNNTLLVTASTRAWLDYTRDWAKRLDKPRPTGGSDGVYAYFLK 346 Query: 275 YAKATNLVEVLTGV--------------------SEKLKDEK---GNAR--------KPS 303 K + V++ + +EK ++ + G AR +P Sbjct: 347 NTKVADTWPVVSSIFGNGETNTQQKEPGVDLLAEAEKAREAQNSTGTARASDRELSSEPG 406 Query: 304 SSG--------------AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 +SG D + D + N+++ + ++L ++ +D R QVL Sbjct: 407 NSGRAIPKSNNVQTMSVMTDQYRVVVDAKRNAIIFSGRYGDYQRLIELLQFVDQRPRQVL 466 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW 409 ++A+I EV+ N +LG +W N N G +GL ++ G + Sbjct: 467 LQAVIAEVKLTNDSSLGFEW-NVNKGDITGGTSGL-----------IQQTGNLN------ 508 Query: 410 DMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 AG F GD A S +L++P +V LD + AS +G + V +G Sbjct: 509 ---------LAGVF-GDVTAKFAAALSEGNAKVLSSPRLVVLDQETASIKIGDQIVVKTG 558 Query: 470 --SQTTSGDNVFNTVERKTV--GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT 525 S +SG++ T K + G L++TP +N+ + + I QE+SSV + T P Sbjct: 559 EISNGSSGNDPQVTTSYKYIDTGLSLEITPSINDDGLIEMVISQEISSVSAGGGDT--PP 616 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 N R +Q+ +L +G+TV LGGLL + KVPLLGDIPL+G LF+Y + + K L Sbjct: 617 INRRAVQSKLLADSGKTVYLGGLLSQSNTNNEEKVPLLGDIPLLGNLFKYQTKKIEKTEL 676 Query: 586 MVFIRPTIIRDD-------DVYRSLS 604 ++ I P +I D +R+LS Sbjct: 677 VLLITPYVITSKEEAEFYTDQFRTLS 702 >UniRef50_B8IR79 General secretion pathway protein D n=2 Tax=Methylobacterium RepID=B8IR79_METNO Length = 784 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 97/302 (32%), Positives = 157/302 (51%), Gaps = 24/302 (7%) Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 +P + G VAI+AD NS++ AD +K+ + RLD AQV V I EV+ Sbjct: 468 QPGARG--RGVAISADPANNSVITYADGDTYKKVYAALRRLDATPAQVAVNVTIAEVRLN 525 Query: 361 NGLNLGVQWA--NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM 418 + L GVQ+ + +G + + + AA G + K G + +N + Sbjct: 526 DQLKYGVQYFLDSSRIGLGKNKGSFGLVSAAATGATNVLKPG------------AGFNFL 573 Query: 419 AAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-- 476 G+ D V+++AL +L++PS+V L+N+ A+ VG VP+ + Q S D Sbjct: 574 VGGYSGPD--VVISALDGFTDVKVLSSPSLVVLENQPATLQVGDSVPITT-RQAQSIDYA 630 Query: 477 --NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNA 534 + N VE + G L V P++ + DAV ++IEQE+S+V S+ TL PT + R + + Sbjct: 631 NAPLINQVEFRDTGIILNVIPRIGQNDAVTMQIEQEISAVVGGSD-TLTPTISKRRVAST 689 Query: 535 VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 + V G+TV+L GL+ D + + +P L +P +GQLF T + L+VFIRP ++ Sbjct: 690 ISVANGQTVLLAGLISDKHQRERDGIPFLNRLPQIGQLFSSTDNGAERTELVVFIRPVVV 749 Query: 595 RD 596 R+ Sbjct: 750 RN 751 >UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7W7_KANKD Length = 701 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 119/428 (27%), Positives = 202/428 (47%), Gaps = 58/428 (13%) Query: 178 IEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQ---MPALLSAKIVADK 234 I ++ DV G+ ++++ + A D+ L S+ GK Q + + A I+A + Sbjct: 315 INIVISDDVQGSMALNLVNVPWDQALDII-----LKSKGLGKRQEGNVMMIAPADIIAQR 369 Query: 235 RTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKD 294 L E +Q+ EE T + + YAKA + +L Sbjct: 370 EQQEL-----EANKQQ----------EELAPLRTELIQVNYAKAAEIAAILQAGLGGGSG 414 Query: 295 EKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 + + S G+ +T D++TN++++ + E + ++A+LDI QVL+EA I Sbjct: 415 DGKSVGILSERGS-----VTTDQRTNTILVQDVSTKIEDVRRLVAQLDIPVRQVLIEARI 469 Query: 355 VEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 V DG +LG ++ +V N+ + D+ N I ANPA + + Sbjct: 470 VTADDGFARDLGSRFGVSDV------------MNSGEVNGDFNVNLPI--ANPAGSLGLS 515 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 + + G + L+AL S N+ +++A+P ++T + K A G+++P L G+ + + Sbjct: 516 FARLQDGIV---VDMELSALESENRGEVVASPKVITANQKEAFIKAGEEIPYLQGASSGA 572 Query: 475 GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI--------EQEVSSVDSSSNSTLGPTF 526 + V+ K +LKVTPQ+ V+L++ E + + S+ P Sbjct: 573 AN-----VQFKEAVLELKVTPQITPDGRVILDLAITQDTRGENVIFTSPDGGGSSGAPAI 627 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 NT+ I VLV GET+VLGG+ + SKVPLLGDIPL+G LF+ T E K+ L+ Sbjct: 628 NTQEIGTQVLVDNGETIVLGGIFQHRTTYDESKVPLLGDIPLLGWLFKNTQREDTKQELL 687 Query: 587 VFIRPTII 594 +F+ P II Sbjct: 688 IFVTPKII 695 >UniRef50_C6HW33 Putative general secretion pathway protein D n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW33_9BACT Length = 565 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 107/374 (28%), Positives = 184/374 (49%), Gaps = 42/374 (11%) Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS---GAMDN-VAITA 315 V E++ TR +L + T+ + V+ L KG A +P G D + I Sbjct: 141 VPETQAPPTREMFLYTLENTSAKSIAKTVNAIL--SKGFAPRPVGGVREGGFDGPIQIVP 198 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN------LGVQW 369 D+ +NSL+++A E+L ++ LD + +V V+A ++E+ + LN LG Sbjct: 199 DKSSNSLIVSATAHDYERLKPILHSLDAQPGEVYVKASLIEIST-DKLNNIQVNLLGGVL 257 Query: 370 ANKNVGAQQFTNTGL--PIFNAAQGVADYKKNGGITSANPAWDMFSAY----------NG 417 + N G TN G+ I N A G + +G T A + + S NG Sbjct: 258 GSNNSGVVGLTNYGMLGSIVNGATGASSL--SGSTTGAAGSLGVVSGAAGAASALSGLNG 315 Query: 418 MAAGFFNG-----------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 + AG G + G LL AL + + L+TP I+ D A +G+DVP Sbjct: 316 LVAGVLTGGTFKYNGVNYPNIGELLNALETYSDVRTLSTPEILATDGVKAKITIGEDVPF 375 Query: 467 LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS----TL 522 ++G T G NV ++R+ VG L++TP + + V L+++Q +S++ ++S + Sbjct: 376 ITGQSQTVGGNVMTMIQRQNVGITLELTPHILSHNRVRLDVKQTISALTNASQVIGTIAV 435 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 GPT R+ + + + +G+TVV+GGL+ + +P L DIP++G LF T+ E+ + Sbjct: 436 GPTTTKRSAKTNLTISSGQTVVIGGLISKETSINDQGIPFLSDIPILGYLFSNTNNEKKR 495 Query: 583 RNLMVFIRPTIIRD 596 +L++F+ P +IR+ Sbjct: 496 DDLLIFLTPYVIRN 509 >UniRef50_D2L502 Type II and III secretion system protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L502_9DELT Length = 542 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 109/432 (25%), Positives = 208/432 (48%), Gaps = 37/432 (8%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT 252 ++ + ++ A+++ E L +++S A I A N +++ E ++ Sbjct: 136 EVFYFKHIPAKNVVEDLRKVLSPE-----------ASIFAGTDGNYVVVGDKETNIIKLR 184 Query: 253 SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 ++ +D S T Y+L+Y A +VL G+ K ++ Sbjct: 185 GIIAKID-SPSFAQVTISYHLQYLMAAATAKVL-----------GDIFKKDGKDGSASLQ 232 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 I + +N++V+TA + Q ++A ++A +D R QV + A++VEV +G+ W + Sbjct: 233 ILPLKGSNTVVVTALPAAQSQVANILANMDKRTPQVSISAMLVEVILDESSKMGLDWKLR 292 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN----GDWG 428 + + N AQ G SA+ +S AA FFN G Sbjct: 293 AWSSNKAYN------EFAQDTLAKTLETGSQSASANLAKYSDAGTKAAMFFNIFPGGYLS 346 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVG 488 +L+ ++S+ IL++P ++ DN+ AS ++G+++P+L +T + ++ T ++T G Sbjct: 347 MLVHMISSDTNAKILSSPHLLVADNQEASISLGREIPILKEYRTDTNNDPIKTYSQRTFG 406 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGL 548 +LK+TP + + V L++ Q++S++D + + RT V+V +T+V+GGL Sbjct: 407 LELKMTPTIADNGDVTLKVSQKLSNLDEQDTTNDTYKASERTADTTVVVHDKQTLVIGGL 466 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKY 608 +++ S P IP++G LF ST + KR L++FI PT++RD ++S E Sbjct: 467 TMQTDEKEDSGTPTARKIPVLGYLFGTKSTSKQKRELLLFITPTVVRDPIQADAMSVE-- 524 Query: 609 TRYRQEQQQRID 620 Y++E+ ID Sbjct: 525 --YKEEKPMLID 534 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 131/261 (50%), Gaps = 25/261 (9%) Query: 9 CCLLAALLMPCAGHA---ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVR 65 +L + ++ CA + E+ NF + D+ ++ + LGKT + + G ++V Sbjct: 17 VLMLISPILVCAAKGNSDQGERIELNFRDTDVLAVLQFYAELLGKTFIPAEDLTGKVTVI 76 Query: 66 SNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL 125 ++ +++E + SILD+ G+SV+ +DN + KV++ + S G+ D++ Sbjct: 77 ASSPVTREEAKRLLFSILDVKGFSVVEMDNAY-KVIKKKDAIASAGIKGGGGH--GSDQV 133 Query: 126 VTRIVPLENVPARDLAPLLRQMMD------AGSVGNVVHYEPSNVLILTGRASTINKLIE 179 T + +++PA+++ LR+++ AG+ GN V ++ + + I KL Sbjct: 134 FTEVFYFKHIPAKNVVEDLRKVLSPEASIFAGTDGNYV--------VVGDKETNIIKLRG 185 Query: 180 VIKRVDVIGTEKQQI-IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS 238 +I ++D + I HL+Y A A++L I + GK +L +I+ K +N+ Sbjct: 186 IIAKIDSPSFAQVTISYHLQYLMAAATAKVLGD-IFKKDGKDGSASL---QILPLKGSNT 241 Query: 239 LIISGPEKARQRITSLLKSLD 259 ++++ A+ ++ ++L ++D Sbjct: 242 VVVTALPAAQSQVANILANMD 262 >UniRef50_B2KC06 Type II and III secretion system protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC06_ELUMP Length = 527 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 107/312 (34%), Positives = 155/312 (49%), Gaps = 36/312 (11%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 I D +TN L++T + +L ++A LDI+ QVL+EA I+EV +GL +G+ + Sbjct: 224 IAIDPRTNKLIVTDIPEIFPQLENILAELDIKPPQVLIEAQIIEVNKSSGLEIGLSYGGT 283 Query: 373 NVGAQQFTNTGLPIFNAAQGV-ADYKKNGGITSAN----PAWDMFSAY------------ 415 + +FT A+GV DY K G++ PA Sbjct: 284 DGTIFKFTG-------PARGVDIDYVKGNGVSGWGYIFPPAGTGTGGSSGGDSGGGSTDG 336 Query: 416 -----NGMAAGFFN-GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV--- 466 N F + + ++L +L + + L P +VT++N+ A +D V Sbjct: 337 SGGNSNSPKDAFLDFSSFSIVLKSLLTRGEAKYLGKPKVVTINNQPAVIESTRDAAVGFA 396 Query: 467 --LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGP 524 LSG+ T S + V T ERKTVG LKVTPQVN+ + L IE SSV +S+ S Sbjct: 397 SNLSGN-TGSTNVVSQTAERKTVGLTLKVTPQVNKEGYITLLIEPSYSSVANSAVSDGTK 455 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 R+ V VK G+TVVLGGLL + KVPLLGDIPL+G LF ST + + Sbjct: 456 DTLNRSASTLVRVKNGQTVVLGGLLSSREILEDRKVPLLGDIPLIGWLFTQRSTTKETTD 515 Query: 585 LMVFIRPTIIRD 596 +++F+ PTI+ D Sbjct: 516 MVIFVTPTILAD 527 >UniRef50_D2QZD1 Type II and III secretion system protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZD1_9PLAN Length = 1314 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 127/492 (25%), Positives = 231/492 (46%), Gaps = 71/492 (14%) Query: 163 NVLILTGRASTINKLIEVIKRVDVI-GTEKQ-QIIHLEYASAEDLAEILNQL-------- 212 N +++TG ++ + +I+++D + TE Q ++ +E A LAE L L Sbjct: 612 NSIVVTGPTQSMPLMQALIEQMDALPATEAQIKVFTIENGDATALAETLQNLFGQQQQGG 671 Query: 213 ----------ISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE 262 + G S +L+ + D RTNS++ SG + +L LD + Sbjct: 672 GQNQGQFGLQTATGAGDS---SLVPLRFSVDTRTNSIVASGTTGDLNVVYQILVRLDEGD 728 Query: 263 SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG----NARKPSSSGAMDNVAITADE- 317 + T VY L+ + A + V T ++E L +++ NA + + I E Sbjct: 729 IRQRVTTVYRLRNSPAAD---VATAINELLTNQRDLSQQNAELTTQFEQFEREVIVVPEI 785 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN----GLNLGVQWA--- 370 +NSL+++A +++ V+ LD R V+++ +I EV + G+ LG+Q + Sbjct: 786 VSNSLIVSATPRYFDEIKKVVEDLDRRPPMVIIQVMIAEVLLSDVEQLGVELGIQDSLLF 845 Query: 371 NKNVGAQQFTNTGLPIFN-------------AAQGVADYKKNGGITSANPAWDMFSAYNG 417 ++ +G+ F + + N A QG++ + G+ +P Y G Sbjct: 846 DRGIGSVGFPFNNVALGNNSDATSLATRESVAGQGLSSF----GVGRTDPTL----GYGG 897 Query: 418 MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN 477 + + VL+ AL + + +++ P + TLDN+ A VG VP ++ SQ T Sbjct: 898 LVLSASSESVSVLVRALQQSRRLQVISRPQVQTLDNQPAFVQVGARVPRITSSQLTVNGT 957 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS-----------SVDSSSNSTLGPTF 526 + NTV + VG L VTP+ +++EI+ E S S++S+ + P Sbjct: 958 INNTV-LENVGIILGVTPRTAPDGMIVMEIDAEKSELGPEAEGIPISINSNGDVIRSPQI 1016 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 T Q V ++G+TV++GGL+ +E +VP LGDIP++G+LFR+ S +R L+ Sbjct: 1017 RIATAQTTVSARSGQTVIIGGLITKNQQESTRRVPYLGDIPVLGRLFRFDSVSDERRELL 1076 Query: 587 VFIRPTIIRDDD 598 + + P I+++D+ Sbjct: 1077 IILTPFIMQNDE 1088 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 11/171 (6%) Query: 126 VTRIVPLENVPARDLAPLLRQMMDA-----GSVGNVVHYEPSNVLILTGRASTINKLIEV 180 V I L+NV R L+ L+ + D S + N L+L GRA I ++E+ Sbjct: 370 VVEIYTLKNVDGRALSDLVATIYDQVFSARQSRVTITPLVKPNALMLIGRAEAIPPVVEL 429 Query: 181 IKRVD-VIGTEKQ-QIIHLEYASAEDLAEILNQLISESHGKSQMPAL-LSAKI--VADKR 235 ++++D + E Q ++ L++ S+ D + + G P L ++ +A+ R Sbjct: 430 LQKLDQTVSPESQLKVFRLKFMSSIDAERTVRNFFVDRPGFGTDPRTGLGTRVLTIAEYR 489 Query: 236 TNSLIISGPEKARQRITSLLKSLDVEESEEGN-TRVYYLKYAKATNLVEVL 285 TNSLI+ ++ + LL +LDV SE N R++ LK A A L VL Sbjct: 490 TNSLIVQASQRDLLEVQKLLDTLDVAASESANEVRIFKLKNAVAEELAPVL 540 Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 39/72 (54%) Query: 214 SESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYL 273 SE G + L +I AD R NS++++GP ++ + +L++ +D + E +V+ + Sbjct: 589 SEGRGVLESGILSDMRITADPRGNSIVVTGPTQSMPLMQALIEQMDALPATEAQIKVFTI 648 Query: 274 KYAKATNLVEVL 285 + AT L E L Sbjct: 649 ENGDATALAETL 660 >UniRef50_A1WFQ3 General secretion pathway protein D n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WFQ3_VEREI Length = 720 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 94/307 (30%), Positives = 157/307 (51%), Gaps = 13/307 (4%) Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 A+ N+ + ADE NS+++ + ++ K+ + + RLD+ QVL+EA I+EV + L G Sbjct: 409 ALGNIRVMADELNNSVLVWSTRAEYAKIESTLRRLDLPPTQVLIEASIIEVTLNDDLRYG 468 Query: 367 VQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD 426 +QWA + + +G+ + QG + TS A A G Sbjct: 469 LQWAFND------SRSGI---DRGQGALSSRDG---TSTGGILGGALAGFSYALKSPAGA 516 Query: 427 WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT-VERK 485 +L L++ ++A+PS++ LDN AS VG P+ +G+ + V +T +E K Sbjct: 517 VRAMLNVLSAKTTVKVVASPSLMVLDNHTASIAVGDQTPIQAGTTSNLEGTVTSTNIEYK 576 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 G L VTP VN G+ V ++I+Q V+ V + T F R + + V V++GE++V+ Sbjct: 577 DTGVNLVVTPSVNAGNIVTMQIDQSVTDVGAKDEVTNQRAFLQRQLSSKVSVRSGESIVM 636 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL+ + S S +P+L +PL G LF T + + L+V I P ++R D R +S+ Sbjct: 637 GGLIQESSSSTKSGIPVLHALPLFGNLFGTTVNDGRRTELLVIITPRVVRSDIDIRQVSE 696 Query: 606 EKYTRYR 612 E R + Sbjct: 697 ELRDRMK 703 >UniRef50_C6BWY6 Type II and III secretion system protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWY6_DESAD Length = 534 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 113/415 (27%), Positives = 198/415 (47%), Gaps = 40/415 (9%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT 252 ++I L+Y A D+ Q++S I + K N ++ + +I Sbjct: 137 EVIMLKYLKAADVIADFRQILSPE-----------GSIFSGKSNNYIVFTDTAANVNKIK 185 Query: 253 SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 L+ +D+ S ++ Y L+Y +A + +LT KL EK S+ V Sbjct: 186 ELISHIDMPGSLP-VSKTYSLQYIEAKTVAPMLT----KLYTEKVGKVTQST------VQ 234 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 I + ++TNSL++ A +SV + + ++I++LD+R QV ++A +VEV + LG +W Sbjct: 235 ILSMDETNSLIVLAPESVHDDITSIISKLDVRTMQVSIKAYLVEVTLTDETKLGFEW--- 291 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-WGVLL 431 + + T L +G D+ G I +P +A + N D + +++ Sbjct: 292 -MFSTNADGTDL------KGALDF---GHI--FDPTGIANTAQEALKFSIINSDNFKMMM 339 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNTVERKTVGT 489 AS++ + +++ P IV LDN+ AS VG ++P+L +QT TS NV T + + G Sbjct: 340 NFFASDDSSRVVSAPHIVALDNQKASIAVGTEIPILKLTQTSVTSQQNVIKTYDHRKFGM 399 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLL 549 +L +TP + E V L+I+Q +SS+ + R VLVK +T+V+GGL+ Sbjct: 400 QLNITPTIAENRDVTLKIDQTLSSLLADDTDPDKWQSTDRAASTTVLVKDAQTLVIGGLM 459 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 S P L ++P++G LF K L++F+ P +I D ++S Sbjct: 460 TVNSALDKKGAPYLRNMPVLGPLFGSQDDSMTKSELLLFLTPYVIATPDEADAMS 514 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 126/231 (54%), Gaps = 9/231 (3%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 NF DI +E +GKT + +P ++G ++V S ++ E + S+LD+ GY++ Sbjct: 43 NFRQTDIMAVLEFYSHLMGKTFIPNPELKGPVTVISPKPVTRFEALRLLYSVLDMKGYTL 102 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA 150 + +G+ K+V S ++ G+ DS G GD++VT ++ L+ + A D+ RQ++ Sbjct: 103 VQ-QSGYYKIV-SKSMAVHEGLNVDSITVG-GDQMVTEVIMLKYLKAADVIADFRQILSP 159 Query: 151 GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT-EKQQIIHLEYASAEDLAEIL 209 G++ + +N ++ T A+ +NK+ E+I +D+ G+ + L+Y A+ +A +L Sbjct: 160 E--GSIFSGKSNNYIVFTDTAANVNKIKELISHIDMPGSLPVSKTYSLQYIEAKTVAPML 217 Query: 210 NQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV 260 +L +E GK + +I++ TNSLI+ PE ITS++ LDV Sbjct: 218 TKLYTEKVGKVTQS---TVQILSMDETNSLIVLAPESVHDDITSIISKLDV 265 >UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteobacteria RepID=A0KN30_AERHH Length = 733 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 122/382 (31%), Positives = 184/382 (48%), Gaps = 42/382 (10%) Query: 233 DKR--TNSLIISGPEKARQRITSLLKSLD-VEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 DKR N L+++ E+ R L+S + V + T + YAKA+ + +L+ S Sbjct: 374 DKRLDNNILLVAPAEEIAAREKQQLESRNQVADLAPLYTEYLQINYAKASEVAALLSSES 433 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 KL KG A++ DE+TN LV+ V + ++ LDI QV+ Sbjct: 434 TKLLSSKG--------------AVSVDERTNVLVVKDTADVISNIKRMLDILDIPVKQVV 479 Query: 350 VEAIIVEVQDGNGLNLGVQWA-NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPA 408 +EA +V + DG LGV+W KN G T +G N + G NGG T P Sbjct: 480 IEARMVTIDDGFDEALGVRWGVTKNDGHGNST-SGTIEGNDSSG----NNNGGSTITRPG 534 Query: 409 WD--------MFSAYNGMAAGFFNGDWGVLL----TALASNNKNDILATPSIVTLDNKLA 456 D + +A +A G LL +AL +K +I+A+P + T + K A Sbjct: 535 VDDRLNVNLPVTNAAGTLAFQVARLADGTLLDLELSALEKESKAEIIASPRVTTANQKPA 594 Query: 457 SFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLE--IEQEVSSV 514 G ++P + S + + F +K V LKVTPQ+ + V+L+ + Q+ Sbjct: 595 LIEQGTEIPYVESSSSGATSVTF----KKAV-LSLKVTPQITPDNRVILDLTVTQDTKGE 649 Query: 515 DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFR 574 + + + N ++I VLV GET+VLGG+ K VSKVPLLGDIP +G LFR Sbjct: 650 TVPTGTGDAVSINAQSITTQVLVNNGETLVLGGIYQQTIKSDVSKVPLLGDIPGLGVLFR 709 Query: 575 YTSTERAKRNLMVFIRPTIIRD 596 T++E KR L++F+ P I+ D Sbjct: 710 KTTSENKKRELLIFVTPKIVTD 731 >UniRef50_Q1YMS0 Putative general secretion pathway (GSP) protein D n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMS0_MOBAS Length = 700 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 149/612 (24%), Positives = 271/612 (44%), Gaps = 77/612 (12%) Query: 31 NFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NF A I + VE I+G+ LG +DP V G +++ + ++ + S+L G + Sbjct: 96 NFQGAAIPEVVEAILGEALGIGYTLDPDVTGEVTLSTARPVARDDLLAILESVLSGNGLA 155 Query: 90 VITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMD 149 ++ ++ A+ +P + + G L ++PL+ V A+ L +++D Sbjct: 156 LVKAGE-LYRITTDASTAATP---IERGQATAGHGL--SVIPLKYVSAQTLT----RLID 205 Query: 150 AGSV--GNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHLEYASAEDL 205 ++ G+V + N+LI+ G + D + Q I+ L E + Sbjct: 206 GFAIRPGSVRVEKTRNLLIVAGSGEARRTAVGTALSFDTDWMQDQSVAILPLRATKPETI 265 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNS-LIISGPEKARQRITSLLKSLDVEESE 264 L ++ G+S + + +A R + L++S +R + + LD E + Sbjct: 266 IPELTRVFGSRSGESSEDVI---QFMAMPRLKAVLVVSQSRGLVERAQTWVSRLDKENPD 322 Query: 265 -EGNTRVYYLKYAKATNLVEVL-------------------------------TGVSEKL 292 N VY +KY A L E+L S L Sbjct: 323 LNSNVHVYRVKYRDAQKLSELLGRLFSSSAADPAAATEEATPQRDADPSALVEAAFSAPL 382 Query: 293 KDEKGNARKPSSSGAMD---NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 + +S G +D ++ I D NSLVI D++V+ K+ +A +D+ + QV Sbjct: 383 AGSATSLFLGASGGMLDGATSLRIEPDLSNNSLVIYGDRAVRGKVLQALAHIDVPQMQVA 442 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGI--TSANP 407 V + EV+ + L GVQ+ F +G G+ K + G+ T A+ Sbjct: 443 VNVTMAEVRLNDQLRYGVQY---------FIKSG------DIGLGRDKGSVGLFRTIADG 487 Query: 408 AWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL 467 +N + + D ++L AL + +L++PS+V ++N++A F VG +P++ Sbjct: 488 IAREVPGFNFVVGSESSPD--IVLNALDAVTDVRVLSSPSLVVMENEVAKFRVGDQIPIV 545 Query: 468 SGSQTTSGDN---VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGP 524 + + + D + N VE + G + V P++ E V + IEQE+SSV +++ S L P Sbjct: 546 TRTVNSVEDANAPISNEVEYRDTGIIMNVRPRIAENGVVTMVIEQEISSVTANAGS-LTP 604 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 + R++ + + V G+TV+LGGL+ + S +P L + +VG LF S + Sbjct: 605 VISNRSVASTISVVDGQTVLLGGLISEQSDVGRDGIPGLNRLKVVGNLFGSKSRADVRTE 664 Query: 585 LMVFIRPTIIRD 596 L++ IRP++IRD Sbjct: 665 LLILIRPSVIRD 676 >UniRef50_C0GQP0 General secretion pathway protein D n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQP0_9DELT Length = 703 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 158/650 (24%), Positives = 280/650 (43%), Gaps = 93/650 (14%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 AE +F +AD+ + + + Q L + LI P V G +S+ D F+ ++ + Sbjct: 93 AEARDVSFSFYDADLVEVIRVFMQLLEEDYLIHPGVSGRVSLFVKDRFNARQMLGVLEGV 152 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP----------- 131 L + ++I D +++ + PG I PG EL+ I+P Sbjct: 153 LRVNNAAMIRSD----QILEFLPLSRVPGHI-----PG---ELI--ILPDREELPRRGQI 198 Query: 132 -----LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD- 185 L+ + A+++ ++ + + V +E VL+++ ++ K+ +I D Sbjct: 199 IQGFGLDFIAAQEMVNIIEPHLSGDA--RVYAHEEKGVLLVSDYPHSLEKVSRLISLFDE 256 Query: 186 -VIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKI--VADKRTNS-LII 241 + ++ L Y A + A+ L ++ E G + A++ + +R N L + Sbjct: 257 SIFADVLARVYPLRYIEAGEAAQKLENIL-ERFGMDRDRVGRQARVSFLPLERLNMVLAV 315 Query: 242 SGPEKARQRITSLLKSLD--VEESEEG----NTRVYYLKYAKATNLVEVLTGV------- 288 + E + + ++ LD V E G N VYY++Y A +VE L GV Sbjct: 316 TRSETVLSFVQAWVEGLDRPVPEHILGSAGENIYVYYVQYGDAEEIVESLRGVFDQGVEA 375 Query: 289 ---------SEKLKDEKGNARKPSS-SGAMDN-VAITADEQTNSLVITADQSVQEKLATV 337 SE ++ + P SG + V T D TNS++ ++ +V Sbjct: 376 DSEVGREAVSEVASEDDQDVFAPGMVSGELAGPVRFTVDRATNSIITRCRAPDYARVLSV 435 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 + +LD+ QVL+E II EV+ + +GV W Q + G Sbjct: 436 MEKLDLYPKQVLIEVIIAEVRLSDATKMGVDW-------QYILSFG-------------D 475 Query: 398 KNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 + G +PA D G+ + L A + K IL+TP+++ DN+ A+ Sbjct: 476 RLSGELRFDPAADALPGAGGVFRVESSRRLKAALYAAVDDAKLQILSTPTLLASDNRPAT 535 Query: 458 FNVGQDVPVLSGSQ-----TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 N+G VP + ++ T + + + T++ + G L+VTP++N V +EI QEVS Sbjct: 536 INIGDQVPFPTSTRQRLDDTDTSEVIDTTIQYRDTGIILRVTPKINRHGMVRMEIVQEVS 595 Query: 513 SVDSSS-NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 S+ + P NTR + + V ET+V+ GL++ S VP IP+V Sbjct: 596 SLTARRVEGITAPVINTRHAETTLAVDDQETIVIAGLMEQERSRGYSGVPGFRRIPVVKH 655 Query: 572 LFRYTSTERAKRNLMVFIRPTII--RDDDVYRSLSKEKYTRYRQEQQQRI 619 LF + T L+VFI P +I R+D + L++ TR +E ++R+ Sbjct: 656 LFGTSETRFENTELLVFITPHVIMSREDSGF--LTRNFLTRL-EELKERM 702 >UniRef50_Q212Y1 Type II and III secretion system protein n=5 Tax=Bradyrhizobiaceae RepID=Q212Y1_RHOPB Length = 774 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 168/680 (24%), Positives = 287/680 (42%), Gaps = 119/680 (17%) Query: 31 NFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDL---- 85 NF N + ++V G LG +IDP VQG IS+ S + + + L + Sbjct: 99 NFENTPVASVAKVVLGDILGIGYVIDPRVQGNISLSSGRPVPKSDILFALENALRIGGVA 158 Query: 86 -------------------------------YGYSVITLDN----GFLKVVRSANVKTSP 110 YG SV+ L + +K+V S K P Sbjct: 159 LVRDNAAYRLMPQADAVGVGSADAAERTEAGYGISVVPLQHVSAQTVVKLVDSFGTK--P 216 Query: 111 GMI-ADSSR-----PGVGDE------LV------------TRIVPLENVPARDLAPLLRQ 146 GM+ AD+ R G G E LV I P++N + L + Sbjct: 217 GMVRADTGRNLILLQGTGSERRNAVDLVLGFDADWMRGQSVGIFPVQNSNPEPIIAELEK 276 Query: 147 MMDAGSVG---NVVHYEP----SNVLILTGRASTINKLIEVIKRVDVIGTEKQ--QIIHL 197 ++D+G G +++ ++ + VL +T ++ + ++ I+R+D T + + + Sbjct: 277 IVDSGEGGVTQSMIKFQAISRMNAVLAVTRKSELLRRVETWIQRLDTTNTGRSAIHVYRV 336 Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS 257 +Y A +A +LN++ AL SA + S A R+++ S Sbjct: 337 KYGEARQIARVLNEIFGGGGATGSSSALDSAAGQIAPGSGLAASSSSSSALNRLSAGQSS 396 Query: 258 LDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR--------KPSSSGAMD 309 + + A TN +G L D + + SS +D Sbjct: 397 SGFATGAKTAS-----SGAATTNAPATPSGAQGSLFDARSGGSPGGRSGTAESSSGNILD 451 Query: 310 NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW 369 + ITAD N+L+I A Q + + ++D + QV ++A I EV + L GVQ Sbjct: 452 GIRITADTVNNALLIYASQEQYSIVERTVRQVDQPQLQVAIDATIAEVTLTDDLQFGVQ- 510 Query: 370 ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG------ITSANPAWDMFSAYNGMAAGFF 423 + ++ F G+P + G A + A P ++ Sbjct: 511 --TYLTSRDF---GMPADRGSLGTASSSALISAASDVVLNRAIPGFNFLVGSGSSPKAIL 565 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNT 481 N AL + + +L+ PS+V +DN++A+ VG ++P+ +GS T +S + + NT Sbjct: 566 N--------ALHAITEVKVLSNPSLVVIDNQVATLQVGDEIPIQTGSATVLSSSNTIANT 617 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS---------VDSSSNSTLGPTFNTRTIQ 532 + + G L+V P++N V LEIEQE+S+ S+S ++L PT +TR ++ Sbjct: 618 TDYRRTGILLQVVPRINANGNVRLEIEQEISNPVASSSTSSSSSTSTNSLTPTVSTRKVK 677 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 ++V V +G+TV+L GL+ D + S +P L +P VG +F T + L++FIRP Sbjct: 678 SSVAVASGQTVLLAGLISDTQNKTRSGIPGLDQLPGVGDVFSQTEKIMKRTELIIFIRPQ 737 Query: 593 IIRDDDVYRSLSKEKYTRYR 612 IIRD +++E T+ R Sbjct: 738 IIRDGSDAHFVAEELRTKLR 757 >UniRef50_B1ZUM2 Type II and III secretion system protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUM2_OPITP Length = 673 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 159/634 (25%), Positives = 276/634 (43%), Gaps = 79/634 (12%) Query: 34 NADIRQFVEIVGQHLGKTILIDPSV-QGTISVRSNDTFSQQEYYQFFLSILDLYGYSVIT 92 +ADI + ++ + G++IL + T V + ++ E + L L V Sbjct: 46 DADIDTVLGLLEIYTGRSILRPQQLPTATYRVVIDRKVTKSEAIMALETALSLNQIGVAP 105 Query: 93 LDNGFLKVVRSANVKT-SPGMIADSSRPGVGD--ELVTRIVPLENVPARDLAPLLRQMMD 149 L + FLKVV + VKT +P MI S+ G+ + T++ L+ + + P + ++ Sbjct: 106 LGDKFLKVVALSQVKTEAPEMIEGSTL-GLAPSGRVATKLFQLDFLRVNEFVPQITPLLT 164 Query: 150 AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAE 207 G VV + +N ++T S + ++ +++++D + + L + A DL Sbjct: 165 PGVANGVVPLDKANAALITDTVSNLQRIEMLLQQLDKPSMAGLTPKFYQLNFTKASDLVT 224 Query: 208 ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGN 267 L + + ++Q+ + +S AD RTN +I+ + L+ LDV Sbjct: 225 KLRGMF-QGPLQNQLGSSISYN--ADDRTNQVILLSDPRQHPLFDELIAKLDVRAEPNTR 281 Query: 268 TRVYYLKYAKATNLVEVLTGV-------SEKLKDEKGNARKPSSSGAMDN---------- 310 V YLK+A A ++ +L+ + ++K G+ R P N Sbjct: 282 NEVIYLKHASAKDVAPLLSQLVSGQNTAAQKAAGTSGSVRAPVPQPNQPNQAATPDAAVA 341 Query: 311 --------------VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 + I DE++NS+V++ + ++ ++DI AQV +E II E Sbjct: 342 LAGATVDTNEFSSYITILPDERSNSIVVSGTVDDIRLIRDLVEKVDILLAQVRIEVIIAE 401 Query: 357 VQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 V + G+ N V Q ++ G I N A VA + + G+ N Sbjct: 402 VTLDDSNKTGLSALNLTVATPQGSSQGTHITNFAGKVAGWDISQGVV------------N 449 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 +A GD G SN K IL+ P+IVT NK A VG+ +P+++G TT+ Sbjct: 450 PLAFQAALGDAGT-----RSNVK--ILSAPTIVTTHNKEAQILVGESLPIITGIYTTAVG 502 Query: 477 NVFNT---------VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV--DSSSNSTLGPT 525 + T V K + LKVTP + + ++ L+I+Q+V V S N++ P Sbjct: 503 STTPTEPGFAQNQQVTYKDIAIDLKVTPLIGDDGSIQLKIDQKVDDVVRTISINNSDQPV 562 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 R + + V G+ VVLGGL + +K+ L +IP++ LF + + L Sbjct: 563 IGRRQATSFINVSDGQIVVLGGLQRTANTRGRNKLGFLVEIPILSHLFGARTNSVRRTEL 622 Query: 586 MVFIRPTIIRDD-------DVYRSLS-KEKYTRY 611 ++FIRP +I D + SLS KE+ +Y Sbjct: 623 LLFIRPHVIAPDAGTADATNTINSLSNKEQINQY 656 >UniRef50_Q1Z9G5 General secretion pathway protein D n=2 Tax=Photobacterium profundum 3TCK RepID=Q1Z9G5_PHOPR Length = 406 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 94/327 (28%), Positives = 160/327 (48%), Gaps = 33/327 (10%) Query: 268 TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITAD 327 T+ Y L Y + + +++ V G + S + N+ N++++T Sbjct: 113 TKFYDLNYVENVKISDLIQAVLTAYSKNTGEMQTAYSVITLPNI--------NAMIVTGS 164 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIF 387 S ++ +I R+D+RR QVL++A++++ + G+ ++GV GA Sbjct: 165 PSQLTQIDNLIKRVDVRRKQVLIDAVVMDTRLGDSESIGVSLDVLLEGA----------- 213 Query: 388 NAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPS 447 G +NP + ++ G + GD L+TA+ N +L+ P Sbjct: 214 ------------GFRLISNPVSSIKESFKGGNIIYDKGDVSALVTAITQNQNTKLLSKPY 261 Query: 448 IVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 ++ +D + S NVGQ+VP L ++T++ ++ +ER+ VG L V P + D+V+L I Sbjct: 262 LLVMDREKGSINVGQNVPFLVSTETSNNGSLVQKIERQNVGLGLSVVPHI-VNDSVVLGI 320 Query: 508 EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 Q SSV S S+ N R I V V G++++LGGL+ D S++ S VPLL DIP Sbjct: 321 NQTSSSV-SDSDIASDIITNNREINTVVQVLDGQSIILGGLVSDESRKSESGVPLLKDIP 379 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTII 594 +G LFR TS + + V I+ T+I Sbjct: 380 WIGGLFRTTSDKSVSSQMSVLIKVTVI 406 >UniRef50_A7IH57 General secretion pathway protein D n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IH57_XANP2 Length = 767 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 161/315 (51%), Gaps = 27/315 (8%) Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW- 369 + ITAD NSL+I A Q + + +LD + QV +EA + EV + L GVQ+ Sbjct: 450 IRITADAINNSLLIFASQENYRIIERTLMQLDQPQLQVAIEATVAEVTLNDTLAYGVQFY 509 Query: 370 -ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWG 428 +K++G + N G + + + D I P +++ Sbjct: 510 LTSKDLGLGR--NNGSVLNTLSSDITDQ----AINRVLPGFNLLVGRENQPRA------- 556 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNTVERKT 486 +L AL + +L+ PS+V +DN+ A+ VG +VPV +GS T +S + V NT+E K Sbjct: 557 -ILDALHTVTDVKVLSNPSVVVVDNQKATLQVGDEVPVSTGSATVLSSSNTVVNTIEYKN 615 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS---------SNSTLGPTFNTRTIQNAVLV 537 G L V P+VN V LEIEQE+S+V S +++ L PT + R +++ + V Sbjct: 616 TGIILHVVPRVNVNGQVRLEIEQEISNVTQSDPTTSGTSSNSTGLTPTVSQRKVKSVIAV 675 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 +G+TV+L GL+ + VP+L IP VG F +T+ + L++FIRP IIRD+ Sbjct: 676 ASGQTVLLAGLISERHNGVRQGVPILDQIPGVGDAFAHTNGTVKRTELIIFIRPQIIRDN 735 Query: 598 DVYRSLSKEKYTRYR 612 ++++E + R Sbjct: 736 VDAHTVAEELRAKLR 750 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 23/267 (8%) Query: 28 YGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 Y NF+N + ++V G LG +IDP VQGT+++ S + E + L Sbjct: 107 YDLNFDNTPVTSVAKVVLGDILGVGYVIDPRVQGTVTLASARPVPKTELLYVLEAALKTN 166 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIAD--SSRPGVGDELVTRIVPLENVPARDLAPLL 144 +++ G+ V + + + G AD +SRP G + +VPL V A L PLL Sbjct: 167 NVAMVREGAGYRLVPLT---EAAGGGNADVGTSRPEPGYGI--SVVPLRYVSAEALMPLL 221 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHLEYASA 202 A G V N+LI+ G S I + D Q + + ++ Sbjct: 222 DSF--ATRAGAVRADPGRNLLIVQGTGSERQSAINTVLSFDADWMRGQSVGVYPVRNSAP 279 Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL----IISGPEKARQRITSLLKSL 258 E L L ++ LS K+V + N L +++ + Q + + L Sbjct: 280 EPLISELESIMDAGDSG------LSHKMVKFQAINRLNAIMVVAKKPELLQTAGTWIGRL 333 Query: 259 DVEESEEGNTRVYYLKYAKATNLVEVL 285 D ++ G RVY L+Y A + +VL Sbjct: 334 DRSDTTVG-VRVYRLRYGDAKQMAKVL 359 >UniRef50_A4C8H8 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C8H8_9GAMM Length = 685 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 99/348 (28%), Positives = 175/348 (50%), Gaps = 39/348 (11%) Query: 270 VYYLKYAKATNL---VEVLTGVSEKLKDE----KGNARKPSS-SGAMDNVAITADEQTNS 321 +Y +Y++A ++ +E L G L + N+RK + + + +++ + DE++NS Sbjct: 351 IYQPQYSRAVDMGESLEALIGEVSSLTTSTSAAQENSRKRGAVTASSEDLKMVIDERSNS 410 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 ++ +++ ++ RLDI Q+++E II EV N GV++A KN N Sbjct: 411 VIFFTTGEKYQQILPLVKRLDILPKQIMLEVIIAEVSLTNEFKQGVEFAFKN------GN 464 Query: 382 TGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT-ALASNNKN 440 G TS A+ M + G++ G G L+ L +N+ Sbjct: 465 YG-------------------TSTEKAF-MGDGFGGLSY-LLQGTQGKLIVNLLQTNSLV 503 Query: 441 DILATPSIVTLDNKLASFNVGQDVPVL--SGSQTTSGDNVFNTVERKTVGTKLKVTPQVN 498 +IL+ PS+V D A+ NVG D+P++ + S +GD +E + G +L VTP VN Sbjct: 504 NILSRPSLVVRDGVNATINVGTDIPIVGETASDPINGDRQTTKIEYRKTGVELAVTPTVN 563 Query: 499 EGDAVLLEIEQEVSS-VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQV 557 VL+EI+Q++S+ V+S S + P+ RTI V+ ++G+T++LGGL+ + + Sbjct: 564 AQGIVLMEIKQKISNQVESGSTVSGNPSVFERTINTEVVAESGQTIILGGLISENKSTKA 623 Query: 558 SKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 S+VP IP++G LFR + K L++ + P +I + + K Sbjct: 624 SRVPFFSGIPILGNLFRADTESGDKTELVILVTPRVIESSSEWDDVKK 671 >UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYV5_DESOH Length = 538 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 106/349 (30%), Positives = 169/349 (48%), Gaps = 33/349 (9%) Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD-NVAITADEQT 319 ++ E T+V++LKY++A ++ +L V+ AR S+ G + ++ D++ Sbjct: 185 QQGERSVTQVFFLKYSEAADVANLLKPVT---------ARAASAEGVKEAQQSVVVDKRN 235 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 N++++ E+ A +I ++D QVL+EA IVE LG+QW Q Sbjct: 236 NAVIVHTPLPGIEQCAALIRQIDRPTRQVLIEAHIVETSKDTARQLGIQWGGVAKDKQHS 295 Query: 380 TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY------NGMAAGFFNGDWG----- 428 TG A Q + D NG +ANP + + + G++ G+ D G Sbjct: 296 WFTGATEGPAGQTLFD--ANGVPVAANPTGNWAANFPASLGNTGLSLGYIYQDLGQSLIA 353 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVG 488 LTAL + K +IL++PSI TLDN A G+DVP T DN N +E K Sbjct: 354 AQLTALEEDGKLNILSSPSITTLDNSAAVIESGRDVPF-----QTVEDNEVN-IEWKKAV 407 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL---GPTFNTRTIQNAVLVKTGETVVL 545 L VTP + + + ++I+ +D S N+ L PT T+ + +++ G+T V+ Sbjct: 408 LSLAVTPHIIDASTLRVKIKTHKDELDWS-NAVLTDGNPTIITKNAETEMILFDGQTTVI 466 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 GGL S + VPLLG IP++G FR TS +++FI P I+ Sbjct: 467 GGLNKQSSSQSQFGVPLLGRIPILGFFFRSTSRSNDMEEVLIFITPHIL 515 >UniRef50_A3ERG1 Putative general secretion pathway protein D n=2 Tax=Leptospirillum sp. Group II RepID=A3ERG1_9BACT Length = 555 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/343 (27%), Positives = 165/343 (48%), Gaps = 28/343 (8%) Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL----- 365 V I D +NSL+++A + + ++ LD + +V V+A ++E+ N+ Sbjct: 188 VQIVPDIPSNSLLVSATMNDYSIIKGLLRSLDRQPGEVYVKASLIEISTDKLNNIQVNLL 247 Query: 366 -GVQWANKNVGAQQFTNTGL--PIFNAAQGVADYKKNGGI---TSANPAWDMFSAYNGMA 419 V + G TN G+ + N A G G T A A + G+ Sbjct: 248 GAVATGSNGAGVLGGTNYGMVGDVVNGATGADATTSTTGAPVATGAAGAAQSLTGLTGLI 307 Query: 420 AGFFNG-----------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS 468 AG G G LL AL +++ L+TP I+ D++ A VG+DVP ++ Sbjct: 308 AGVLTGGSFNYGGVNYPSIGTLLNALQTDSDVKTLSTPEILATDSQKAKITVGEDVPFIT 367 Query: 469 GSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS----NSTLGP 524 G T G NV ++R+ VG L +TP + D V L ++Q ++++ ++S +GP Sbjct: 368 GQSQTVGGNVMTMIQRQNVGITLDITPHILAHDRVRLNLKQTITALTNASQLIGTMAVGP 427 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 T R+ + + V++G+TVV+GGL+ S +P LG+IP++G LF T E+ + + Sbjct: 428 TTTKRSTKTILTVRSGQTVVIGGLISSEKSLNKSTIPWLGEIPVLGYLFSSTQNEKKRDD 487 Query: 585 LMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALV 627 L++F+ P IIR+ + + + ++ R DG + L+ Sbjct: 488 LLIFLTPYIIRNAYSFAQVKHDAPAELKEA--ARKDGLIQTLI 528 >UniRef50_C5B3Y6 Putative General secretion protein D n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B3Y6_METEA Length = 693 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/321 (29%), Positives = 161/321 (50%), Gaps = 20/321 (6%) Query: 298 NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEV 357 N+R + A V + AD TN+LV+ + +A+ I LD+ QVL+EA I EV Sbjct: 377 NSRSQGARDAQSGVEVRADIATNTLVVVSRPEDYHIVASAIRNLDVLPTQVLIEATIAEV 436 Query: 358 QDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNG-GITSANPAWDMFSAYN 416 + L GV+W + G Q + G + + +G +T A ++ Y+ Sbjct: 437 RLNEALRHGVRWYFQAGGLGQGASMG----------SGFGTSGRSVTGQGSAGEIALTYS 486 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT--- 473 G N + ++AL S +I+++P++ LDN+ A+ VG+ VP+ + S + Sbjct: 487 ---LGLANAK--LAISALESVTDVEIVSSPALTVLDNQTATLKVGEQVPIATRSARSVVN 541 Query: 474 SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQ 532 + + N +E K G L+VTP+VN G V+L+I+QE S V ++ S L PT R I Sbjct: 542 ADAPLVNDIEMKDTGVILQVTPRVNAGGLVMLDIKQEASDVVPTTTSNLDSPTIRLRQIT 601 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 + + VK+G +VLGG++ VP L DIPL+G + + + L++ IRPT Sbjct: 602 STIAVKSGAEIVLGGIIQRGRHRGAGGVPFLRDIPLLGTALNNIDSGQDRTELVIIIRPT 661 Query: 593 IIRDDDVYRSLSKEKYTRYRQ 613 ++ ++ +++ E R + Sbjct: 662 VMANNAEVSTVTGEIKRRLHR 682 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 121/265 (45%), Gaps = 29/265 (10%) Query: 31 NFNNADIRQFVEIVGQH-LGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NF N ++++F V + L + +++DP+V G I+VR+ + S++ L G + Sbjct: 61 NFVNVELQEFARAVFEEVLHENVIVDPAVTGRITVRAGNPISKKAALALVREALQASGAT 120 Query: 90 VITLDNGFLKVVRSANVKTSPGMIADSSR-PGVGDELVTRIVPLENVPARDLAPLLRQMM 148 + R NV I + R G E+V R++PL + + ++ + Sbjct: 121 ----------LSRPGNVW----RIGPAPRNAGPSREMV-RVIPLRFIGITEARGAIQPFL 165 Query: 149 DA-GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV--IGTEKQQIIHLEYASAEDL 205 A G+ +V L+L GR + + L +V+ DV + ++ L+ A A + Sbjct: 166 GANGNTSDVAASGTGRFLVLAGRTAEVEGLEQVVATFDVDELRGRAFALVPLKQAGAAPV 225 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNSLII--SGPEKARQRITSLLKSLDVEES 263 A+ L ++I S G +Q K+ +R N++++ S P+ +R+ + LD Sbjct: 226 AQDLLRMIG-SEGIAQ-----GVKVFPVERMNAIMVASSNPDVI-ERVRGWIGGLDQSGQ 278 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGV 288 ++ +Y ++ +A + +VL G+ Sbjct: 279 DQRRVYIYPVRNRRAAEIAKVLDGM 303 >UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Burkholderia RepID=A2S716_BURM9 Length = 616 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 107/382 (28%), Positives = 186/382 (48%), Gaps = 37/382 (9%) Query: 219 KSQMPALLSAKIVADKRTNSLIISGP-----EKARQRITSLLKSLDVEESEEGNTRVYYL 273 +S ALL A +A R S+I P E+ RQR + ++ +E +R + L Sbjct: 263 RSAFDALLDAHGLAMARRGSVIWVAPVAELAERERQRFDAHARAAQLEPLA---SRGFVL 319 Query: 274 KYAKATNLVEVLTG-VSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQE 332 +YA+A ++ +L G +++ ++G+ + AD +TN L +T Sbjct: 320 RYARAADVQRLLAGSAGQRILSKRGS--------------VLADPRTNLLFVTDLSGRLA 365 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG 392 ++A +I +LD QVL+EA IVE G NLG + A + A + + N Sbjct: 366 QIADLIGKLDTPSRQVLIEARIVEGDRGFSRNLGARLALRAPDAGERATGIVAGRNGTLA 425 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLD 452 + G +A +F+A A+ + V L+AL + + I+++P +VT D Sbjct: 426 ELAARPISGFDAATAGLTLFAAR---ASRLLD----VELSALEAEGRGQIVSSPRVVTAD 478 Query: 453 NKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 A G ++P Q G+ V + V+ + KL+V PQ+ V+L+++ Sbjct: 479 RTKAVVEQGAELPY----QAKVGNGV-SGVQFRRATLKLEVEPQITPDGRVILDLDVAKD 533 Query: 513 SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 SV + S GP +T+ +Q V V+ G TV +GG+ + ++ V++VPLLG IP++G L Sbjct: 534 SVGEETAS--GPAIHTKHVQTRVEVENGGTVSIGGIFESDDRDDVTRVPLLGKIPVLGAL 591 Query: 573 FRYTSTERAKRNLMVFIRPTII 594 FR+ + + L+V+I PT++ Sbjct: 592 FRHRAQRAQRSELVVYITPTVV 613 >UniRef50_O80300 Virion export protein n=9 Tax=Inovirus RepID=G4P_BPIF1 Length = 429 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 88/278 (31%), Positives = 145/278 (52%), Gaps = 30/278 (10%) Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 L++TA S ++LA +D+ R QVLVE++I E +G + + Sbjct: 174 LLVTASASQHKELAAFFPSVDVPRTQVLVESVIFETTASDGFDFSFAAGDP--------- 224 Query: 382 TGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-WGVLLTALASNNKN 440 +G P+ A G+ + ++S G + G FNG+ G+ L AL +++K+ Sbjct: 225 SGSPV---AGGINTDRLTSVLSS-----------TGGSFGIFNGNILGLSLKALETSSKS 270 Query: 441 DILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV---FNTVERKTVGTKLKVTPQV 497 +L+ P I+T+ + +F GQ+VP ++G T NV F T+ER VG LKV P V Sbjct: 271 TLLSMPRILTMSGQPGTFTAGQNVPFVTGRVTGEAANVNNPFQTIERHDVGISLKVVPVV 330 Query: 498 NEGDAVLLEIEQEVSSV-DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQ 556 G +++++ S+ DS + S + NTR+I V +K+G+TV+LGG++D+ + Sbjct: 331 TPGGLLIMDVSTNADSISDSQTASDI--ITNTRSISTTVQLKSGQTVLLGGMVDNRESDS 388 Query: 557 VSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 S VP + IPL+G LF S+ KR L + IR ++ Sbjct: 389 DSSVPWVSKIPLIGALFTSKSSNANKRTLYILIRARVV 426 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 28/202 (13%) Query: 11 LLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTF 70 LLA+LL C ++ NNA +R+FV + GK ++I P V+G I+V S D Sbjct: 4 LLASLL--CVLSFQSFAIPVELNNAPVREFVSWYSKTTGKPVIISPDVKGEITVYSADV- 60 Query: 71 SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTS----------PGMIADS---- 116 ++ E QFF S+L G+ L G VV+ N T P D Sbjct: 61 TKDELPQFFTSVLRANGFD---LSPGNPAVVQKFNRNTYEYSDSFSEPVPASSYDGDVPP 117 Query: 117 ------SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSN--VLILT 168 ++P + L+T+ P+ NV A+DLAP++ + ++ Y L++T Sbjct: 118 PTGDFFTKPEIRANLITQTYPVNNVRAKDLAPVIDIFLKGENIAGTKVYPLMGRIFLLVT 177 Query: 169 GRASTINKLIEVIKRVDVIGTE 190 AS +L VDV T+ Sbjct: 178 ASASQHKELAAFFPSVDVPRTQ 199 >UniRef50_Q0BR89 General secretion pathway protein D n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BR89_GRABC Length = 779 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 160/318 (50%), Gaps = 31/318 (9%) Query: 304 SSGAMDNVA-------ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 S+G MD+ I + Q N+++I A +S + T++ ++DI QV ++AII E Sbjct: 440 SAGNMDDAGTDPNTLRIVPNTQNNAVLIFATESEYGPIETMLRKIDILPLQVRIDAIIAE 499 Query: 357 VQDGNGLNLGVQWANKNVGAQQFTNTGL-PIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 V + L G Q+ F GL A A GG+ +A A Sbjct: 500 VALNDTLRYGTQFF--------FREGGLNSAMQTAAATAATASTGGLLAA--------AI 543 Query: 416 NGMAAGFF---NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG-SQ 471 G + GF + + +T L S K +L++P ++ LDN+ A VG VP L+ SQ Sbjct: 544 PGFSNGFLLTGSSSSQLAMTLLQSVTKVQVLSSPELMVLDNEPARLQVGALVPYLTAQSQ 603 Query: 472 TTSGDN-VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS--SNSTLGPTFNT 528 T G + + N V + G L VTP+VN V L+I QEVS VD+S +N P F Sbjct: 604 ATIGQSAIINAVSYQQTGVILNVTPRVNNSGLVTLDISQEVSDVDTSINTNGISSPAFQQ 663 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 R++Q+ V+V+ G+TV L GL+ D + VP L D+P++G +F + R++ L++ Sbjct: 664 RSVQSRVVVQDGQTVGLAGLIRDNNSRANGGVPFLKDVPVLGSVFGQQNNNRSRTELLIL 723 Query: 589 IRPTIIRDDDVYRSLSKE 606 + P +I D R+L+++ Sbjct: 724 VTPHVIHDQRDARALTED 741 Score = 42.0 bits (97), Expect = 0.069, Method: Compositional matrix adjust. Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 23/265 (8%) Query: 31 NFNNADIRQF-VEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NF + DIR +I+G L IDPSV GT + ++ S +L+ G + Sbjct: 102 NFTDTDIRDVSAQILGGLLKVNYTIDPSVHGTATFHTSQPLSATALLPTLQVLLNQNGAA 161 Query: 90 VITLDNGF--LKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQM 147 V+ + + L + +A + S G ++ G IVPL A LA L+ Sbjct: 162 VVQTEGLYRVLPIGAAAGITASAGQNGEAILNGGAT-----IVPLRYASAEQLAKTLQPY 216 Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR--VDVIGTEKQQIIHLEYASAEDL 205 G+ + N ++++G +I +I+ VD++ + + + A++ Sbjct: 217 AQNGA--KIAADAGRNAVLVSGDPQAREVMIGLIQAFDVDMLAGQSFALFPADAGGAKEY 274 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD--VEES 263 A+ L S G + + +I+ R N+ +++ ARQ L+ +D V + Sbjct: 275 AQALQTAASSQQGGALAGVV---RILPMDRINA-VLAVARSARQ--IEDLRRIDTMVGQR 328 Query: 264 EEGNTR---VYYLKYAKATNLVEVL 285 +TR VYYL+ ++ ++ VL Sbjct: 329 RRQSTRSWHVYYLQNGRSNDVAYVL 353 >UniRef50_D0HB85 S-protein secretion component D n=1 Tax=Vibrio mimicus VM223 RepID=D0HB85_VIBMI Length = 713 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 141/575 (24%), Positives = 247/575 (42%), Gaps = 90/575 (15%) Query: 91 ITLDNGFLKVVRSANVKTS-PGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ-MM 148 + ++ +KV+ ++ ++ P +I S P + V IVP+ + + + L+ ++ Sbjct: 169 LAVEGDLVKVIPASKTDSAVPTLIDSSIAPILRYGKVVEIVPIYYLSIIEASSLVSDFLL 228 Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAEDLA 206 D G G V+ N L++ I+++ +++ +DV Q I + +Y S E L Sbjct: 229 DQGG-GKVLRQIHLNALMIIANKEDIDRVYALLREIDVPNRVSQNITLVAPKYVSLETLM 287 Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT-SLLKSLDVEESEE 265 L +S + M + ++ N+L+++ K T +K LD + E Sbjct: 288 ADLQLSLSAASVPVSMNTGKNGVVLIPLSNNTLMVTSSTKGWMNYTLEWIKQLDQPKKIE 347 Query: 266 GNTRVY--YLKYAKATNLVEVLTGV-SEKL---KDEKG--------------------NA 299 GN +Y Y++ KA + V++ + SE++ K+EK Sbjct: 348 GNQGIYAYYMQNTKAEDAWGVVSAIFSEQMGANKEEKSKGTDLVAAAQQAIQEQQSTDTG 407 Query: 300 RKPSSSGAM---------------DNVAITADEQTNSLVITADQSVQEKLATVIARLDIR 344 P ++G + +N + D + NS+ T + + ++L ++ +D R Sbjct: 408 NTPGNTGILRSNKSKSNKDMQVVTENYRVVVDSKRNSIFFTGEYADYQRLVELLRFVDKR 467 Query: 345 RAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITS 404 QVL++A I E+ + GV F T I +G+A + + G+ S Sbjct: 468 PQQVLIQATIAEINIDDAQQFGVD----------FDITSGTITGGTKGLAGF--DNGVLS 515 Query: 405 ANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464 G F GD + A K +L++P I+ ++ + A VG + Sbjct: 516 L--------------TGVF-GDVTMGFRAALKTGKAQVLSSPRIIAMNQEAARITVGDQI 560 Query: 465 PVLSGSQTTSGDNVFNTVERKTV--GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL 522 V++G + GD+ T K V G L + P +N+ V LEI QEVS N Sbjct: 561 QVVTGEVSGGGDDSKATTTYKYVDTGVTLDIIPTINQNGLVELEISQEVS------NKGT 614 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 G N R++Q +L +G+TV +GGL+ E ++VPLLGDIP +G LF+Y S + Sbjct: 615 GTDINKRSLQTKLLADSGDTVFMGGLIKQDIGETDNRVPLLGDIPYLGNLFKYKSQTQKS 674 Query: 583 RNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 L++ I P +I S+E Y E QQ Sbjct: 675 VELVLLITPYVIN--------SREDAIFYTNEYQQ 701 >UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZY4_CHRSD Length = 668 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 124/404 (30%), Positives = 189/404 (46%), Gaps = 57/404 (14%) Query: 212 LISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTR 269 LI +SHG +A +R +I+ P E A+ +L E+ T Sbjct: 308 LILQSHG------------LASRRNGDVIVVAPVDELAQMERQTLENRAQSEQLAPLVTD 355 Query: 270 VYYLKYAKATNLVEVLTGVSEK--LKDEKGNARKPSSSGAMDNVAITADEQTNSLVITAD 327 ++YAKAT+L +L G SE L E+G +T DE+TN+L++ Sbjct: 356 YVQVRYAKATDLAAMLRG-SEGFGLLSERGR--------------VTVDERTNTLLV--- 397 Query: 328 QSVQEKLATV---IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGL 384 + +E+LA++ + RLD+ QV +EA IV +D LGV W F + G+ Sbjct: 398 RDTREQLASIRGMLERLDVPVRQVQIEARIVIARDTASRELGVNWGISQRQGVTFDDDGV 457 Query: 385 PIFNAAQGVADYKKNGG-ITSANPAWDMFSAYNG---MAAGFFNGD--WGVLLTALASNN 438 V D +G SA + D+ + + G+ +GD + L AL S Sbjct: 458 ------GSVVDRNPSGANRGSAGLSVDLGDSDGSGSTFSFGYLSGDVLLDLELRALESEG 511 Query: 439 KNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVN 498 K+ ++ P ++T + K A GQ++P T+SG VE K L+ TPQ+ Sbjct: 512 KSQTISQPKVITANQKTAVIKQGQEIPYQE--STSSG---ATNVEFKEAVLSLEATPQIT 566 Query: 499 EGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQV 557 ++++++ +V + NS G P +T +I+ VLV G TVVLGG+L + Sbjct: 567 PDGSIVMDLLINNDTV--ADNSYDGAPAIDTNSIETQVLVDDGATVVLGGILTSEQLRNL 624 Query: 558 SKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 K P LGD+PL+G LFRYT K L++FI PTII D R Sbjct: 625 YKTPFLGDLPLIGSLFRYTQESNEKVELLIFITPTIIGDGQANR 668 >UniRef50_C6Q9T0 General secretion pathway protein D n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9T0_9RHIZ Length = 773 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 155/312 (49%), Gaps = 37/312 (11%) Query: 302 PSSSGAM--DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 P SS A D V +T DE+ N L+I A + +K+ ++ R+D QVL+ A + EV Sbjct: 442 PQSSAATSSDQVRVTPDERNNKLLIKASERNYKKILQILHRVDQPPLQVLINATLAEVTL 501 Query: 360 GNGLNLGVQ-WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT-SANPAWDMFSAYNG 417 L GVQ + KN G K+GGI S + A + G Sbjct: 502 NKNLQYGVQFFLQKNHG----------------------KSGGIGFSTSDALAIAPVMPG 539 Query: 418 --MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS---GSQT 472 + AG D V+L ALA I+++PS+V L N+ A VG VP+++ S Sbjct: 540 LNLIAGNIGSDPRVILDALAKETAVRIVSSPSVVVLHNQQAILEVGDQVPIITREAQSVI 599 Query: 473 TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN-----STLGPTFN 527 N +E K G L VTP++N V +E++QEVS+V ++S ++L PT + Sbjct: 600 NPDSPTVNEIEFKNTGVILNVTPRINSNGLVTMEVQQEVSAVQNTSGQSDAATSLTPTIS 659 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLF-RYTSTERAKRNLM 586 R + + + V++G+ VVLGGL+ + S +P++ IP +G + T R + L+ Sbjct: 660 QRRVTSTIAVQSGQMVVLGGLIREEVSRSKSSIPVINKIPYLGDVLGGETDNGRTRTELV 719 Query: 587 VFIRPTIIRDDD 598 VFIRP +IR+ + Sbjct: 720 VFIRPIVIRNPE 731 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 26/270 (9%) Query: 28 YGANFNNADIRQFVEIVGQH-LGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 Y NF++ D+ + V++V + LG T + D ++G +S+ + ++ E SIL Sbjct: 92 YELNFSDTDLSELVKVVLKDTLGITYVFDSHIEGRVSISTGGPVTRAELISILESIL-AT 150 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG--VGDELVTRIVPLENVPARDLAPLL 144 ++ + ++NG +VV A+ + D R VG I L V + +L Sbjct: 151 NHAALLIENGVYRVVPEADARQQGISAFDYVRESREVGAGYGVSIFALRYVSTEAMMRML 210 Query: 145 RQMMDA-----GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHL 197 +M SV N N+L + G + ++E++ DV + Q I L Sbjct: 211 DGLMVKQEDLRASVFN-------NMLFIRGPGQSRQSIVEIVSMFDVDWMKGQSAGIFKL 263 Query: 198 EYASAEDLAEILNQLI-SESHGKSQMPALLSAKIVADKRTNSLIISGPE-KARQRITSLL 255 + AS +D+ L Q+ ++ G+ + K R N++++ P + ++ + Sbjct: 264 DNASPDDVIRELKQVFQTDRQGRGLV------KFQTIGRLNAVLVLAPRSQTVDKVGEWI 317 Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVL 285 LD +++ N VY ++ +A +L +L Sbjct: 318 SRLDHSGADDDNYYVYRVENGRAKDLARLL 347 >UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella RepID=A8GZ28_SHEPA Length = 688 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 115/385 (29%), Positives = 185/385 (48%), Gaps = 54/385 (14%) Query: 233 DKRT--NSLIISGPEKARQRITSLLKSL-DVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 DKR N L+++ E+ R + LK++ +V+E + + YAKA ++ +L G Sbjct: 335 DKRIEGNILMVAPIEEIAIRESQELKNMQEVKELAPLYSEYLQINYAKAVDIAALLKGED 394 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 L +G ++ DE+TN+L++ + E + +I LDI QVL Sbjct: 395 SSLLTSRG--------------SVAVDERTNTLLVKDTEETLENIHRLIEVLDIPIKQVL 440 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITS----- 404 +EA +V V+D +LGV+W + + T+ L +G D NG + S Sbjct: 441 IEARMVTVKDDVSEDLGVRWGVTDQQGDKGTSGSL------EGAGDIA-NGIVPSLSDRL 493 Query: 405 --------ANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLA 456 ANP F +A G + L+AL NK +I+A+P I T + K A Sbjct: 494 NVNLPAAVANPTSIAFHVAK-LADGTV---LDLELSALEQENKGEIIASPRITTSNQKAA 549 Query: 457 SFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS 516 G ++P + S + + TV K L+VTPQ+ + V+L++E + DS Sbjct: 550 FIEQGVEIPYVEASSSGA-----TTVTFKKAVLSLRVTPQITPDNRVILDLE---ITQDS 601 Query: 517 SSNSTLGPT-----FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 + PT +T+ I VLV GET+VLGG+ +VSKVP+LGDIP +G Sbjct: 602 QGKTVDTPTGQAVSIDTQRIGTQVLVDHGETIVLGGIYQQQLISRVSKVPILGDIPYLGF 661 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRD 596 +FR TS + ++ L++F+ P I+ + Sbjct: 662 MFRSTSDKNERQELLIFVTPKIVSE 686 >UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisseriaceae RepID=C0DV38_EIKCO Length = 707 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 89/284 (31%), Positives = 146/284 (51%), Gaps = 20/284 (7%) Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA-NKNV 374 D TN+L+I +Q+V ++ +I +LD+ QV++EA IVE DG LGV++ NK Sbjct: 430 DPATNTLIIKDNQNVIKEFERLIEQLDVPARQVMIEARIVEANDGFSRALGVKFGYNKTS 489 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM--FSAYNGMA--AGFFNGDWGVL 430 G+ + G+ NG S P ++ SA + + +G G+ Sbjct: 490 GSTRI----------GSGLGSGGANGNTFSIAPNVNLPAISATSSITIVRALSSGALGLE 539 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 LTA+ N+ I+++P ++T D K A+ G+++P S + + F K Sbjct: 540 LTAMQEQNRGKIISSPRVLTQDRKEATIKAGREIPYQEASSSGATSTSF-----KEAVLG 594 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 L VTPQ+ V+++I+ SVD + + P NT+ + +V+ G T++LGG+ + Sbjct: 595 LTVTPQITPDGNVIMDIKLNKDSVDENCSVLGTPCINTKELVTRAMVEDGGTIILGGIYE 654 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 + + KVPLLGDIP+VG LFR T +K L++FI P I+ Sbjct: 655 EENSNSQYKVPLLGDIPVVGNLFRGTRRNNSKNELLIFITPRIM 698 >UniRef50_A3UH04 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UH04_9RHOB Length = 622 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 139/561 (24%), Positives = 252/561 (44%), Gaps = 57/561 (10%) Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 +++RS + S Q ++ F + + YG +V T DN + V RS P +I +R V Sbjct: 51 VTLRSVEDMSPQTFFTLFETAIGEYGLAVETHDNMVVVVERSDLRSAMPQIIQARARSSV 110 Query: 122 GDEL--VTRIVPLENVPARDLAPLLRQMM-DAGSVGNVVHYEPSNVLILTGRASTIN--- 175 +L V + V + A + ++RQ+ D +G + N + LTG + +N Sbjct: 111 ASQLRPVIQFVEFDYADAAVIEAVVRQVFPDTQGLG-IQTRRDINSMTLTGLSDIVNSAN 169 Query: 176 KLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESH------GKSQMPALLSAK 229 +LIE + R G + + +AE LA+ L ++S G+ P L Sbjct: 170 RLIEQLDRPRFAGATAVALSPRNWEAAE-LAQTLTDILSLEGFQIGLGGRQPRPLTL--- 225 Query: 230 IVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTR--VYYLKYAKATNLVEVL-- 285 + ++ L+ + E + + + + L+ E TR VY ++ A L ++ Sbjct: 226 LPLEQTNQILVFAKNEDSLGHLIATARRLEEAAEHEDVTRSYVYQVRNTDAEELANIIRT 285 Query: 286 ----TGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 TG S E +S A+ + + D N L+ T +++ + LA ++ +L Sbjct: 286 VLGETGRSSSTGAETTAGETAGASSAVSS-RLAVDTFGNRLIFTGNRNEYDNLARLLGQL 344 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 D ++VLVE I EV + LGV++ F NT GG Sbjct: 345 DTPVSEVLVEVTIAEVIFSDTTRLGVEF---------FLNT----------------LGG 379 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 + + + G++A G + A ++N+ ++L+TP IV + A VG Sbjct: 380 DVQVGTSDGLGLSSGGLSAIVDAGQLDIEAAARSTNSNINVLSTPRIVARSGESAEVQVG 439 Query: 462 QDVPVLSG-----SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS 516 DVP+++ +Q + ++ +V ++ G L V P+V + + L I QEVSS D Sbjct: 440 TDVPIITSQRAANTQDSGSTDILQSVSYRSTGVLLTVEPRVYSNNRIDLTIMQEVSSADD 499 Query: 517 SSNSTLG-PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRY 575 + N + P + R + +++ ++ G+T VLGGL+ + + VPL+ DIP++G +F+ Sbjct: 500 NPNQAIASPIISNRRMTSSITLQDGQTAVLGGLMSETVNRGSTGVPLVQDIPVLGNIFKT 559 Query: 576 TSTERAKRNLMVFIRPTIIRD 596 + +R L+V + P I+ D Sbjct: 560 ETFSNDQRVLLVLVTPYILND 580 >UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-like n=8 Tax=Pseudomonas syringae group RepID=Q4ZRP9_PSEU2 Length = 776 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/311 (30%), Positives = 158/311 (50%), Gaps = 25/311 (8%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 ITA + +N L++ + +++ + I RLD QV +E I+EV+ L++GVQW Sbjct: 471 ITAQKSSNQLLVRTRPAQWKEIESAIKRLDNPPLQVQIETRILEVKLTGELDMGVQWYLG 530 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 + T + +QG GG A+ +S F + + V L Sbjct: 531 RLAGNSGTTGNVTNTAGSQGAIG---TGGAALASTDAFFYS--------FVSNNLQVALR 579 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT-----SGDNVFNTVERKTV 487 AL +N + +L+ PS+V ++N+ A VG ++P+ SQT+ + ++VE Sbjct: 580 ALETNGRTQVLSAPSLVVMNNQQAQIQVGDNIPI---SQTSINTNTNTGTTLSSVEYVQT 636 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSS--SNSTLGPTFNTRTIQNAVLVKTGETVVL 545 G L V P++N G V ++I+Q+VS DSS +++ P +TR++ V ++G+TV+L Sbjct: 637 GVILDVVPRINPGGLVYMDIQQQVSDADSSGTTDANGNPRISTRSVATQVAAQSGQTVLL 696 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL+ + E V+ VP LG IP + LF TS + + L+V I P +I R ++ Sbjct: 697 GGLIKQDNAETVNAVPYLGRIPGLRWLFGNTSKSKDRTELIVLITPRVITSSSQARQVTD 756 Query: 606 EKYTRYRQEQQ 616 + YRQ+ Q Sbjct: 757 D----YRQQMQ 763 >UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L240_HALNC Length = 729 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 102/352 (28%), Positives = 169/352 (48%), Gaps = 29/352 (8%) Query: 267 NTRVYYLKYAKATNLVEVLTGVSEKLK-DEKGNARKPSSSGAMDNVAITADEQTNSLVIT 325 +T + + YAKA ++ ++L S+ K G + D ++T D ++NSL++T Sbjct: 379 STDIIQINYAKADDIYKLLESASKTGKTSADGKGGDTAQRFISDRGSVTVDPRSNSLIVT 438 Query: 326 ADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW---ANKNVGAQQF--- 379 S +++ +I +LD QVL+E IV D LGV+W A N G F Sbjct: 439 DTASALDRIRDLIHKLDKPVKQVLIETRIVIATDNFARQLGVRWGVQAGFNRGNSTFGLG 498 Query: 380 -------TNTGLPIFNAAQGV-----ADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW 427 + T LP A+ G D+ N I S PA + G+A N Sbjct: 499 STAPLVASGTSLPTAGASTGTVGTAPTDWMVNTPI-SGTPAGSL-----GLAILGSNVLL 552 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTV 487 + L+AL S +I+++P ++T + A + G ++P ++ T+G NTV K Sbjct: 553 DLELSALQSEGTGEIVSSPKVITTNGHTALISQGTEIPYIA--TQTAGGVASNTVSFKKA 610 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS--NSTLGPTFNTRTIQNAVLVKTGETVVL 545 +VTPQ+ + ++++I+ + D ++ T P NTR ++ V VK GETVVL Sbjct: 611 VLSTEVTPQITPNNNIIMDIDVKKDEPDYTNLLPGTTNPPINTREVKTKVEVKNGETVVL 670 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 GG+ + ++KVP GD+P +G LF+ + + L++F+ P II D Sbjct: 671 GGIYQFENNNSINKVPFFGDLPGIGNLFKNKEVKNQRLELLIFVTPKIINSD 722 >UniRef50_B0BAC9 Type III secretion structural protein (Outer membrane ring) n=16 Tax=Chlamydiaceae RepID=B0BAC9_CHLTB Length = 921 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 157/658 (23%), Positives = 276/658 (41%), Gaps = 102/658 (15%) Query: 28 YGANFNNADIRQFVEIVGQHLGKTILIDPS-VQGTISVRSNDTFSQQEYYQFFLSILDLY 86 Y NF + I + ++ V + G + D + +Q +++ S+D S + L +L ++ Sbjct: 265 YTVNFEDISILELLQFVSKISGTNFVFDSNDLQFNVTIVSHDPTSVDDLATILLQVLKMH 324 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV-TRIVPLENVPARDLAPLLR 145 V+ N L + R+ + ++ D S + +V TR+ L +V +++ Sbjct: 325 DLKVVEQGNNVL-IYRNPKLSKLSTVVTDGSAKDTCEAVVVTRVFRLYSVSPSAAVGIIQ 383 Query: 146 QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDL 205 ++ ++ + E + +I++ A I K+ E+++ +D GT A D+ Sbjct: 384 PLLSHDAI--ISASESTRHIIVSDIAGNIEKVRELLQALDSPGT------------AIDM 429 Query: 206 AEILNQLISESHGKSQMPALLSA-------KIVADKRTNSLIISGPEKARQRITSLLKSL 258 +E Q + + S +L A +I TN + + + + LL+SL Sbjct: 430 SEYDVQFANPAALVSYCQDVLGAMAEEEAFQIFIQPGTNKIFVISSPRLTAKTIQLLESL 489 Query: 259 DVEESEE-----------------GNTR-----VYYLKYAKATNLVEVLTGVSEKLKDEK 296 D+ E N + +Y LKY + + + + L Sbjct: 490 DIPEMAHTLDDVTSPAAALGSSGAANPKSLRFFMYKLKYQNGAAIAQAIQDIGYNLY--- 546 Query: 297 GNARKPSSSGAMDNVAITADEQ------TNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 + AMD I NS+V+ +Q+ +K+ +++ LD+ QV + Sbjct: 547 -------VTTAMDEDFINTLNSIQWLPVNNSIVVIGNQANVDKVVSLLNGLDLPPKQVYI 599 Query: 351 EAIIVEVQDGNGLNLGVQWANKNVGAQQ---------FTNTGL--PIFNAAQGVADYKKN 399 E +I+E + GVQWA +G +Q +NTGL P+ N + VA Sbjct: 600 EVLILETSLEKSWDFGVQWAA--LGDEQGKVAYASGLLSNTGLTDPLRNQSLPVA--PNP 655 Query: 400 GGITSANPAW-----DMFSAYNGMAAGFF------NGD----WGVLLTALASNNKNDILA 444 G I+ P DM + G NG G LL+AL + ++ Sbjct: 656 GNISLPTPGQLAGISDMMYGSSAFGLGIIGNVLSHNGKSYLTLGGLLSALDQDGDTTVVL 715 Query: 445 TPSIVTLDNKLASFNVGQDVPVLSGSQTTSG-----DNVFNTVERKTVGTKLKVTPQVNE 499 P I+ D + ASF VGQ +P QTTS +V +E + +G L VT + Sbjct: 716 NPRIMAQDTQQASFFVGQTIPF----QTTSTVIQETGSVTQNIEYEDIGVNLVVTSTIAP 771 Query: 500 GDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSK 559 + V L+IEQ +S + S+ L P + + V G +V+ G + D + VS Sbjct: 772 NNVVTLQIEQTISELHSA-QGVLTPVTDKTFAATRLQVPDGCFLVMSGHIRDKLTKIVSG 830 Query: 560 VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 VPLL +PL+ LF + +R KRN+M+FI+P +I + +LS + RY E ++ Sbjct: 831 VPLLSSLPLIKGLFSRSIDQRQKRNIMIFIKPKVISSFEEGTALSNTEGYRYNWESER 888 >UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Methylococcus capsulatus RepID=Q609V4_METCA Length = 751 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 104/316 (32%), Positives = 159/316 (50%), Gaps = 26/316 (8%) Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 +N + AD N+L++ A +++ VI LD+ QVL++A IVE+ N L G++ Sbjct: 439 NNARVVADPANNALIVIAKPQDWKEIEAVIKALDVLPLQVLIDATIVEISLKNDLQYGLK 498 Query: 369 WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWG 428 W + + + + L A V D+ I A A FS Y +A G G+ Sbjct: 499 WLISSGSSTEALGSPL-----AALVKDF-----INGAASASGGFS-YALIANG---GNVK 544 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS--QTTSGDNVFNTVERKT 486 VLL LA N +++++PS++ L+N+ A NVG VPVL+G+ T G FN +++ Sbjct: 545 VLLNLLAQENLVNVISSPSLMVLNNQQAKINVGDQVPVLTGTTASATIGTTQFNQFQQQQ 604 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVD----SSSNSTLGPTFNTRTIQNAVLVKTGET 542 G L++ P+VN G V LEI Q +S+ S T F R IQ+ V V G+T Sbjct: 605 SGVTLQIRPRVNSGGLVSLEIFQAISTPSPVEVGSGQKTF--QFANREIQSVVAVPNGQT 662 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRS 602 + LGGL+ D E + +P L IP++G +F T + + L+V I P ++ S Sbjct: 663 LALGGLISDKRSETQTGLPYLNQIPMIGWMFGSTEIKPERTELVVLITPRVVEKKGDINS 722 Query: 603 LSKE---KYTR-YRQE 614 +S E K T YR E Sbjct: 723 ISNEFRRKLTNLYRGE 738 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/293 (22%), Positives = 135/293 (46%), Gaps = 23/293 (7%) Query: 27 QYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDL 85 +Y NF++AD+ + +++ G L ++ P V G +S+++ ++ E ++L + Sbjct: 53 KYTLNFDDADLSEVTKVILGDTLKVNYVLSPKVTGKVSLQTTRPLTEDEMIPTLETLLRM 112 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT-----RIVPLENVPARDL 140 G ++I + G K+ A S +S PGVG ++ R++PL + A ++ Sbjct: 113 NGAALIR-EGGMYKIEPDAQAAIS------ASGPGVGLGMMEPGYQLRVIPLRYISAAEM 165 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK--RVDVIGTEKQQIIHLE 198 +L +M +V + E N++++ G A + ++E ++ VD + + ++ Sbjct: 166 QKVLEPIMPPKAV--LRMDETRNLVMVAGTAEELGGVMEAVQIFDVDYMRGMSVALYPVK 223 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPE-KARQRITSLLKS 257 A +A+ L +++ GK M +L +I+ +R N+++ PE + ++ Sbjct: 224 NADVPTIADELTKVLGLG-GKGAMGNVL--RILPIERLNAILAVAPEMHLLHEVQDWIER 280 Query: 258 LD-VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD 309 LD + GN VY ++ A L L G+ +G + P +G MD Sbjct: 281 LDRYNTTRTGNVHVYRCQHVDAGELAHTLGGIFGGGAGRQGPSLAPGLTG-MD 332 >UniRef50_D0SET7 Type IV pilus biogenesis and competence protein pilQ n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SET7_ACIJO Length = 390 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 101/342 (29%), Positives = 170/342 (49%), Gaps = 52/342 (15%) Query: 273 LKYAKATNLVEVLTGVSEKLKDEKG---NARKPSSSGAMDNV-----AITADEQTNSLVI 324 L YAK+ +++++L E +D KG N S S A++++ + +D +TN+L+I Sbjct: 77 LSYAKSADVLKLL----EDSRDSKGGESNRTAGSDSLALESLLSARGSAVSDSRTNTLII 132 Query: 325 TADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGL 384 Q +K+ +I LD+ QV+VEA IV LG++W+ K +G Sbjct: 133 NDRQQNIDKIRRMIDLLDVAVKQVMVEARIVTASTDFSRELGIKWSAKKLGNS------- 185 Query: 385 PIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL----------LTAL 434 P++ D++ P++D+ AG FN +G+L L+AL Sbjct: 186 PVWGG-----DFQ---------PSFDLGVDLATNTAGTFN--FGLLKISDYMLNLELSAL 229 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVT 494 ++ ++L+ P ++T D + A G ++P QT S T E + KL+VT Sbjct: 230 QADGHGEVLSAPKVLTGDKQKAYILRGTEIPY----QTWSATEGLKT-EFRAANLKLEVT 284 Query: 495 PQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSK 554 P + V + ++ E +V + +++ G NT ++ VLV GETVVLGG+ DD + Sbjct: 285 PSITPDGKVQMALKIEKDTVGTLTSA--GYLINTNELETNVLVDDGETVVLGGIFDDIKQ 342 Query: 555 EQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 Q KVP GD+P+VG LF+ + A+ L++F+ P I+ D Sbjct: 343 NQYEKVPFFGDLPVVGALFKNNTRSSAQTELLIFVTPRIVND 384 >UniRef50_A0P0N8 General secretion proteinD n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0N8_9RHOB Length = 789 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 161/305 (52%), Gaps = 30/305 (9%) Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 V+I D + N+L++ + +++ V+ LD+ AQV++EA IVEV + L GVQ Sbjct: 463 VSIVPDVRNNALLVHSKFRQFKRIRDVVRTLDVPLAQVVIEATIVEVALNDRLKYGVQAF 522 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 G + ++ LP AD + G + +D+ S +G A F + Sbjct: 523 LSGEGVE-IRSSRLP------DPADTGEPGAVA----LFDVDSV-DGTTATF-------V 563 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVF----NTVERKT 486 L AL + + ++++P + LD K A +VG +P L QT + + N +E + Sbjct: 564 LEALQTVTELKVISSPYLTVLDGKAARLSVGDQIPFLV-QQTNASETGTTTTTNQIEVRD 622 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS-SNSTLGPTFNTRTIQNAVLVKTGETVVL 545 VG L+VTP + ++VLL ++QEVSS SS S L P + RTI + V++++G+ +L Sbjct: 623 VGVILQVTPSIRPDNSVLLNVQQEVSSAKSSGSGENLTPVISQRTINSDVVIESGKMALL 682 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL+ S+E +KVPL+ +P+VG LF+ T + + L+V I P ++R RS Sbjct: 683 GGLIQSRSEEVTTKVPLMSKMPIVGNLFKQTDAVKDRTELLVMITPRVVR-----RSHQL 737 Query: 606 EKYTR 610 ++ TR Sbjct: 738 DELTR 742 >UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteobacteria RepID=A1TYV8_MARAV Length = 704 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 101/339 (29%), Positives = 162/339 (47%), Gaps = 35/339 (10%) Query: 270 VYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQS 329 + + YAKA ++V L E+L +G +++D +TN++ + Sbjct: 387 IIQVNYAKAADVV-ALIQADEELISSRG--------------FVSSDARTNTISVRETAE 431 Query: 330 VQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW--ANKNVGAQQFTNTGLPIF 387 E++ +++ D+ QV +EA IV Q +LGV+W A NV G + Sbjct: 432 KLEEIRRLVSTWDVPVRQVSIEARIVRAQTNVAEDLGVRWGGAAYNVDGDDVITVGGSL- 490 Query: 388 NAAQGVADYKKNGGITSANP-AWDMFSAYNGMAAGFFNGDWG-------VLLTALASNNK 439 Q D G T + P A + +G A F WG + L+AL S+ + Sbjct: 491 GTLQEARDAASGGSNTISFPGALGVDLGVSGDGASSFAIGWGSDDFLVDLELSALESDGR 550 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNE 499 ++++ P +VT D + AS G+++P T+SG +E K L+VTPQ+ Sbjct: 551 AEVVSQPRVVTADRQTASIKSGEEIPYQEA--TSSG---ATNIEFKEAVLSLEVTPQITP 605 Query: 500 GDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS 558 D +++++ V + DS T G P+ NT + VLV GETVVLGG+ Q + Sbjct: 606 DDKIIMDL---VVNQDSRGEVTAGIPSINTNEVTTQVLVANGETVVLGGIFQSEVATQTT 662 Query: 559 KVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 K P LGDIP +G+LF+ T + L++FI P II++D Sbjct: 663 KTPFLGDIPYLGRLFKRTEHIDERSELLIFITPKIIKND 701 >UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRB5_PSYIN Length = 689 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 100/325 (30%), Positives = 158/325 (48%), Gaps = 46/325 (14%) Query: 275 YAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKL 334 YAK ++ +L+ L E+G A++ D +TN+L++ +V + + Sbjct: 400 YAKVADISAMLSSDKTSLLSERG--------------AVSVDNRTNTLLVKDTAAVIDAV 445 Query: 335 ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF--TNTGLPIFNAAQG 392 +I LDI QV++EA +V V D LGV+W + + N LP +AA Sbjct: 446 KKMIQILDIPVRQVVIEARMVTVDDSVSEELGVKWGMTSTSSSTVDSLNVNLPATDAAGT 505 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-WGVLLTALASNNKNDILATPSIVTL 451 +A +K A F NGD + L+AL S NK +I+A+P I T Sbjct: 506 IA-FK---------------------LAKFSNGDILDLELSALESENKAEIIASPRITTA 543 Query: 452 DNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 + + A G ++P + + + + +V K L VTPQ+ + V+L++E Sbjct: 544 NQQTAYIEQGTEIPYVESASSGA-----TSVAFKKAVLSLTVTPQITPDNKVILDLEITQ 598 Query: 512 SSVDSSSNSTLGPT--FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLV 569 +V + ++ G +T+ I VLV GET+VLGG+ + VSKVPLLGDIP + Sbjct: 599 DTVGETVSAGTGEAVAIDTQKIGTQVLVGNGETLVLGGIYQQRNSIAVSKVPLLGDIPYL 658 Query: 570 GQLFRYTSTERAKRNLMVFIRPTII 594 G LFR T+ E K L++F+ P I+ Sbjct: 659 GALFRSTNEENTKSELLIFVTPRIV 683 >UniRef50_D1R7U2 Putative type III secretion protein SctC n=2 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7U2_9CHLA Length = 956 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 96/326 (29%), Positives = 148/326 (45%), Gaps = 24/326 (7%) Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK---- 372 E +NSL+ T KL +IA LD QV +E +I+++ + L GV W + Sbjct: 595 ESSNSLIFTGTVESIRKLEELIAELDTPLRQVFIEMLILDISLDDSLQYGVNWGTRFGGG 654 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN------------PAWDMFSAYNGMAA 420 NV Q + AA N GIT+ P +++ ++ Sbjct: 655 NVAGSQAFLSDASTLPAALDTTGIVNNRGITTGQTLLPNASGLARLPGYNLGVLGQNVSL 714 Query: 421 GFFNGD-WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS-QTTSGDNV 478 G D G L+ A+ +I+ P I+T DN A VG + P + S G + Sbjct: 715 GNLTFDSIGALVKAIHDKTNTNIIMNPKILTEDNVTAEIFVGFNTPFQTQSISNIGGTPI 774 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL------GPTFNTRTIQ 532 N E + VGT KVTP + D V LEI +EVSSV S++ S + GPT Sbjct: 775 ANNFEFRNVGTTFKVTPFLGNNDIVTLEIREEVSSVASTTTSDVLNTALPGPTTRLSRTT 834 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 V V +VL G++ D + VP LG +P++G F + AKRN+M+FIRP Sbjct: 835 TRVHVPDKYFLVLSGMMQDEDTRRRVNVPCLGGLPIIGAAFSDKTVSDAKRNIMIFIRPE 894 Query: 593 IIRDDDVYRSLSKEKYTRYRQEQQQR 618 II ++ ++++K + +R + + + Sbjct: 895 IIDTEEEVQNVTKHQQDVFRYKNESK 920 Score = 41.6 bits (96), Expect = 0.088, Method: Compositional matrix adjust. Identities = 57/253 (22%), Positives = 116/253 (45%), Gaps = 29/253 (11%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPS-VQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 NFNN + +++ V + GK + D + + I+V + + + L ++ + Sbjct: 185 NFNNVHVVEYIRFVSRISGKNFIFDEADLDFNITVIAEELTTIDNVLAALFQELRVHELN 244 Query: 90 VITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMD 149 ++ N L + ++ NV + + A PG ELVT++ L ++ A ++R + Sbjct: 245 ILEEGNNIL-IHKNPNVSSISIVGAGDVIPG-NFELVTQVFYLNSIDPAKAAAVVRPLTS 302 Query: 150 AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD------VIGTEKQQIIHLEYASAE 203 A ++ ++ E SN LI+T S + + +++K +D V+G Q +I + +S + Sbjct: 303 AKAIVEIL--ENSNNLIITDLVSNVRLIAKLLKSLDAPAGGVVLG---QYVI--KNSSLD 355 Query: 204 DLAEILNQLISESHGKSQMPAL--LSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 L +++ Q++ +P L V NS+ I ++ S+L+ LD Sbjct: 356 TLMDLIQQIM--------LPIAQDLPITFVPQPTANSIFIVASPYLVEKSISMLQRLD-- 405 Query: 262 ESEEGNTRVYYLK 274 +G TR+Y +K Sbjct: 406 -QNQGTTRIYEMK 417 >UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gammaproteobacteria RepID=B7VLJ8_VIBSL Length = 572 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 117/383 (30%), Positives = 181/383 (47%), Gaps = 47/383 (12%) Query: 233 DKRTNSLIISGPEKARQRI---TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 DKR + +I KA + +L KS EE E + + + +AKAT++ +++ G Sbjct: 214 DKRVDGNVILVAPKAELDLREQQALEKSRLEEELGELKSEIIKINFAKATDIADMIGG-- 271 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATV---IARLDIRRA 346 +G S G+ IT DE+TNSL+I + ++E +A + I LDI Sbjct: 272 ------EGAVSMLSERGS-----ITIDERTNSLLI---RELEENIAVIRGIIESLDIPVK 317 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QV +EA IV V +GN LGV+W + F G N + Y NGG N Sbjct: 318 QVQIEARIVTVTEGNLDELGVRWGVSSTNGS-FKVGGSIEGNHPSQITPYDDNGG----N 372 Query: 407 PAWDMFSAYN-------GMAAGFFNGDWG------VLLTALASNNKNDILATPSIVTLDN 453 A D F N + F G + L+AL +K +I+++P ++T + Sbjct: 373 SAIDDFLNVNLGATSPSASSIAFQVAKLGSDTLLDLELSALQQESKAEIISSPRLITTNK 432 Query: 454 KLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLE--IEQEV 511 K A G ++P L S + + F +K V LKVTPQ+ + ++L+ + Q+ Sbjct: 433 KPAYIEQGTEIPYLESSSSGATSVAF----KKAV-LSLKVTPQITPDNRLVLDLSVTQDR 487 Query: 512 SSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 + + +T+ I VLV GETVVLGG+ QV KVPLLGD+P++G Sbjct: 488 PGQVVKTGTGEAVAIDTQRIGTQVLVNNGETVVLGGIFQHSVSSQVDKVPLLGDLPVLGA 547 Query: 572 LFRYTSTERAKRNLMVFIRPTII 594 LFR + K L++F+ P ++ Sbjct: 548 LFRRSYENVGKSELLIFVTPKVV 570 >UniRef50_A3UDE6 General secretion proteinD n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UDE6_9RHOB Length = 658 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 154/613 (25%), Positives = 267/613 (43%), Gaps = 86/613 (14%) Query: 32 FNNADIRQFV-EIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 + NADI + +++G+HL I P VQG +++R D ++ + Q +L S+ Sbjct: 76 YRNADIATVINQVLGEHLQTDFTIAPDVQGQVTLRMQDVATRGDALQNLRDVLAPLSISL 135 Query: 91 ITLDNG-FLKVVRS------ANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 I D G F+ VVR A+V +PG A + G G +++ LE D+ L Sbjct: 136 I--DRGDFIAVVRGGGQQQGASVILTPGQAAPA---GAGVAMLS----LEQAHPSDVETL 186 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK--QQIIHLEYAS 201 L + V V+ + V+++ G A+ + E + +DV ++ +I L+ + Sbjct: 187 LNALGTGAQV--VLADDQRQVIVVRGEAAALTAASEALALMDVDWLDEISTSLIPLQSTA 244 Query: 202 AEDLAEILNQLISESHGKSQMPAL--LSAKIVADKRTNSLIISGPEKARQRITSLLKSLD 259 DL + + L+ ++ AL +SA V R N + + + ++ LD Sbjct: 245 PSDLIQDIEPLLGPYASTIELIALDRISALAVLSARPNGIAL---------VERWVRELD 295 Query: 260 VEESEEGNTR--VYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM--------- 308 N R VY +++A LV + V E L + ++ + Sbjct: 296 QPRRASSNPRQLVYTVRHADPEELV---SAVRELLGYGQYGGVYGGNASGVNTGSASRSS 352 Query: 309 ----------DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 D + I+A N ++ ++ ++ ++ LD RAQV +EA I+ V Sbjct: 353 QSSSQSYNDEDRLQISAVPSQNKIIARGPEARISEVRDLVELLDQPRAQVSIEAAIISVS 412 Query: 359 DGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM 418 + GV W GA + + A G A S + G Sbjct: 413 LQDEFRFGVNW-----GAAPSEQIDVRFADNADGTA-----------------ASVFPGF 450 Query: 419 AAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ---TTSG 475 +A + N D L L + + ++++ P+++ L N+ A VG VPV++ S T Sbjct: 451 SATYLNTDIEATLNMLDAVTEIEVISRPNVMALHNQQAELQVGDQVPVITQSAVSVTNPD 510 Query: 476 DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNA 534 + N + G L VTP V G V ++I QEVSSV +S+S + PT R I + Sbjct: 511 APIVNQTAYRDTGVILSVTPHVRAGGIVEIDITQEVSSVVQTSSSGIDSPTIRQRRITST 570 Query: 535 VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 +LV +G++V LGGL+ VP+L ++P+VG++F S + L++ ++PT+I Sbjct: 571 LLVPSGQSVALGGLIATTRTTNERGVPVLRELPVVGRVFGSDSESVDRTELVILLKPTVI 630 Query: 595 RD----DDVYRSL 603 D DV+ +L Sbjct: 631 TDPSQPSDVWLAL 643 >UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas intermedia K12 RepID=C7HZW7_THIIN Length = 752 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 124/429 (28%), Positives = 195/429 (45%), Gaps = 74/429 (17%) Query: 225 LLSAKIVADKRTNSLIISGP-------EKARQRITSLLKSLDVEESEEGNTRVYYLKYAK 277 +L AK + +++ +++ P EKA L +L+ +SE + L Y K Sbjct: 342 ILRAKGLGERKEGNVLWIAPRDEILAREKADLEAKKSLSALEPVKSE-----TFQLNYQK 396 Query: 278 ATNLVEVLTGVSEKLKDEKGNARKP------SSSGAMDNVAIT------ADEQTNSLVIT 325 A +V +LTG + + P SSS A + ++ AD +TN + +T Sbjct: 397 AATVVAMLTGAAGGAQSGTTATPSPVLLPGLSSSAAPTSRILSPRGTVLADPRTNQIFVT 456 Query: 326 ADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLP 385 S E++A +IA++D QV++EA IVE D G +LGV+ + Q G+P Sbjct: 457 DIPSKLEEVAQLIAKIDKPVRQVMIEARIVEASDQFGRSLGVKLGFLDARGIQ---GGVP 513 Query: 386 IFNAAQG-----------VADYKKNGGITSAN---------PAWDM-------------- 411 N G VA+ G ++A PA+ + Sbjct: 514 GTNLVGGTYGTVSGDYLGVANQTNQPGSSAATLADSQFVNLPAFGLAGSLLAGAAPSSLG 573 Query: 412 FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 S +N A F N + L+A+ ++ K I+++P ++T D A+ G ++P Q Sbjct: 574 ISLFNAAANRFIN----LELSAMEADGKGKIISSPRVITADLSKATIEQGTEIPY---QQ 626 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRT 530 TS T ++ + L VTPQ+ V++ +E DS ST G P+ NT T Sbjct: 627 ATSSGATAVTFKKAVL--SLDVTPQITPDGNVIMNVEIHK---DSPGASTAGVPSINTNT 681 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 + V V+ G TVVLGG+ + Q KVPLLGDIP++G LF+ S K LMVF+ Sbjct: 682 VTTQVQVENGGTVVLGGIYTSQEQNQTDKVPLLGDIPVLGNLFKNNSKMYNKNELMVFLT 741 Query: 591 PTIIRDDDV 599 P I+ + D+ Sbjct: 742 PKIVTNADL 750 >UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular organisms RepID=B1Y305_LEPCP Length = 726 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 119/413 (28%), Positives = 195/413 (47%), Gaps = 66/413 (15%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 ++ AK + K+ +++ P E A + L + + E T+ + L Y KA +V Sbjct: 332 IMQAKSLGVKKAGNVLWIAPKDELAAKEKQELEARKQIADLEPLRTQSFQLNYTKAEEVV 391 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNV--------AITADEQTNSLVITADQSVQEKL 334 + LTG ++G+A +G NV + + +TN L ++ S E++ Sbjct: 392 KSLTG------QQQGSA----GTGQGGNVTRILSQRGSAAYESRTNQLFVSDLPSKLEEV 441 Query: 335 ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ---------------WANKN------ 373 A +IA++D+ QV++EA IVE +D G LGV+ W N Sbjct: 442 AQMIAKIDVPVRQVMIEARIVEAEDSFGRTLGVKLGATDLRGINGGVPGWGGNNTRIALG 501 Query: 374 -----VGAQQFTNTGLPIFNAAQGV---ADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 +G I+ +Q V A+ GG T+A A +F A + F N Sbjct: 502 GNYSSIGDTTLQQATGSIYANSQFVNLPANTSSLGGATAATFALSLFGASSNR---FLN- 557 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG-SQTTSGDNVFNTVER 484 + L+AL + K ++++P +VT D A G ++P +G +Q T+ F R Sbjct: 558 ---LELSALEAEGKGKLVSSPRVVTADQVKALIEQGTELPYQTGGNQQTAPSIAF----R 610 Query: 485 KTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETV 543 K KL+VTPQ+ ++++++ + DS TL G NT+ ++ VLV+ G TV Sbjct: 611 KAT-LKLEVTPQITPEGNIIMDVD---VNKDSVGQQTLAGFAINTKHVKTQVLVENGGTV 666 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 V+GG+ + E V+KVP+LGDIP +G LFR + K L+VF+ P +I D Sbjct: 667 VIGGIFETTETESVNKVPVLGDIPFLGVLFRNKTRVANKTELLVFLTPKVITD 719 >UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vibrionaceae RepID=C9QNG5_VIBOR Length = 563 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 99/339 (29%), Positives = 162/339 (47%), Gaps = 28/339 (8%) Query: 262 ESEEGNTR--VYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 E+E G R + +K+AKA+ + ++ G +G SS GA+ + DE+T Sbjct: 245 EAELGELRSEIVKVKFAKASEIASMIGG--------EGAISMLSSRGAL-----SVDERT 291 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 N+L+I Q + + +I+ LDI QV +EA IV V +GN LGV+W N Sbjct: 292 NALLIRDLQPNIDVIQELISALDIPVKQVQIEARIVTVHEGNLDELGVRWGYHNTNGSTS 351 Query: 380 TNTGLP--IFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASN 437 + + +F A N TS N + F + + + L+AL Sbjct: 352 LGSSIEDNVFGAVPIDDMLNVNLAATSVNASSIAFQVAKLGSDMLLDLE----LSALQRE 407 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQV 497 +K +++++P ++T + K A G ++P L S + + F K LKV PQ+ Sbjct: 408 SKAEVISSPRLITTNKKPAYIEQGTEIPYLESSSSGATSVAF-----KKAVLSLKVVPQI 462 Query: 498 NEGDAVLLE--IEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 + ++L+ + Q+ + + NT+ I VLV GETVVLGG+ + Sbjct: 463 TPDNRLVLDLSVTQDRPGDIVKTGTGEAVAINTQRIGTQVLVDNGETVVLGGIFQHSVTD 522 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 V KVP+LGD+PL+G LFR T + K L++F+ P ++ Sbjct: 523 AVDKVPMLGDLPLLGALFRRTYQKMGKSELLIFVTPKVV 561 >UniRef50_B8D2D9 Type II and III secretion system protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2D9_HALOH Length = 881 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 151/657 (22%), Positives = 274/657 (41%), Gaps = 133/657 (20%) Query: 1 MKGLNKITCCLLAALLM---PCAGHAENE------QYGANFNNADIRQFVEIVGQHLGKT 51 MK K+ L+ L++ P A N + NF A+I+ + + + Sbjct: 1 MKTHKKLLAGLMLYLIILSIPGFAFASNGIDSHPVKVDMNFEEAEIQDVLTAIASLVNIN 60 Query: 52 ILIDPSVQGTISVR-SNDTFSQQEYYQFFLSILD------------------LYG----- 87 +++D SV G I+V+ N +F + Y +S LD YG Sbjct: 61 LVVDSSVSGEITVKLDNMSFKEALDYVVKVSGLDYVWKNDTVIVASSERLKSFYGEELVE 120 Query: 88 ------------YSVITL---------DNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 Y +I + D+ LK++ S KT R V D L+ Sbjct: 121 TVSLKYSDPVHIYQLIKVFYPELKVQVDSNNLKLLMSGKRKTILAARNLIDRIDVPDSLI 180 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYE-PSNVLILTGRASTINKLIEVIKRVD 185 T + + A L LR++ G V+ + +N+L++ G + + +E++ R+D Sbjct: 181 TATYVAKFINADSLENHLRRIYP----GLVLSSDRDNNILLIYGSKRKVREALELVNRID 236 Query: 186 VIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPE 245 + E I+ + + E + L P L+ + ++ ++ LIISG + Sbjct: 237 LPRKEATFIVDINKGDVTRIEETVLNL---------FPDLV---VEGNEASHKLIISGDK 284 Query: 246 KARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS 305 + + L+K +D+ EE +T V + Y NL+ V+ G+ Sbjct: 285 EEALKARDLIKEIDI--GEEIDTEVVRVDYGNLDNLISVIQGL----------------- 325 Query: 306 GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 ++ + ++ ++I + S +++ +++ LDI R QV++EA E+ Sbjct: 326 --FPDIRLQSNPLKKEIIIKGNTSEVQEIVSLVNSLDIPRRQVIIEARFEEISANKISEF 383 Query: 366 GVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 G++ N+ QF IF+ A + S N W + Sbjct: 384 GMR---PNLSEIQF------IFDEA--------TRELKSMNITWPEY------------- 413 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV---LSGSQTTSGDNVFNTV 482 L L + ++LA P ++TL+ + A +G VPV + + + N V Sbjct: 414 -----LRFLEEEGQANMLANPRLLTLNGENARLLIGDKVPVKIEETSGSSEESEGESNAV 468 Query: 483 --ERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVLVKT 539 E VG L+ TP + E +++++ EVSS+ S P TR + + +K Sbjct: 469 SYEYIDVGISLEFTPWITEDGYIIMDVAPEVSSLGSPMGGGESIPPIKTREARTKIRLKD 528 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 G+T +GGL+ + E ++KVPLLGDIPL+G LFR + T++ K +++FI P I+++ Sbjct: 529 GQTFAIGGLIREDELESIAKVPLLGDIPLLGTLFRRSQTDKVKTEVVIFITPHIVKE 585 >UniRef50_A8EVV0 General secretion pathway protein D n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVV0_ARCB4 Length = 478 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 102/345 (29%), Positives = 171/345 (49%), Gaps = 30/345 (8%) Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 +K +++ + EE T V LK N++++L V K K KP ++ Sbjct: 94 VKKVEIIKEEEQFTEVIGLKNVDGVNIIKILDDVVNKKYINK--TIKP---------FVS 142 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 D ++NSLV+ A + +++ +I LD +AQV V+A I+EV + +G+ + N Sbjct: 143 LDLESNSLVVMASKDELKQIKDLIQELDKEKAQVYVQAKIIEVNNELVNKIGISYGIINA 202 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTA- 433 A+ + G+ ++ NGG + A D G+ N G+ L A Sbjct: 203 SAR---SDGINAISSNL-------NGGSNAIKEAVDTL----GIRMSDVNIKSGLALGAS 248 Query: 434 ---LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 L N DI++ PSI+ +DNK +S VG+ + V S T G ER+ +G Sbjct: 249 LNLLQQNGALDIVSEPSILAIDNKESSIYVGEKISVEISSTLTDGGLQRTNYEREDIGLT 308 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNST-LGPTFNTRTIQNAVLVKTGETVVLGGLL 549 LKV P+++ + LEI + + S+S S P + I+ A ++ GE+V++GGL+ Sbjct: 309 LKVKPRISSDTKLTLEINTLLEGIKSTSVSAGQNPDTLKKEIKTAAILNNGESVIIGGLI 368 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 ++ ++ KVP+LGDIPL G+LF+ S K NL++ + P +I Sbjct: 369 ENKNETIEQKVPVLGDIPLFGELFKNDSKMNKKNNLVIIVTPYMI 413 >UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Reinekea blandensis MED297 RepID=A4BAN5_9GAMM Length = 709 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 118/389 (30%), Positives = 187/389 (48%), Gaps = 45/389 (11%) Query: 233 DKR-TNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVL---- 285 DKR T ++++ P E A Q L E+ T + YA+A ++ +L Sbjct: 336 DKRQTGNVLLVAPAAELAEQERLELEAREQAEKLAPLRTEYVQVNYARAADIASILRSSS 395 Query: 286 --TGVSEKLKDEKGNARK-PSSSGAMDNV-AITADEQTNSLVITADQSVQ-EKLATVIAR 340 + + DE G PSS G + + +++ DE+TN+L+IT D SV + + + I+ Sbjct: 396 SAAAAAANVGDESGGVNSLPSSGGFLSSRGSVSVDERTNTLIIT-DTSVNLDGIRSAISF 454 Query: 341 LDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNG 400 D+ QVL+EA IV + G LGV+W +Q TG + ++A +D G Sbjct: 455 FDVPVEQVLIEARIVSARTSVGDQLGVRWGGAIFPSQNVFATG-TVESSASIESDIY--G 511 Query: 401 GITSANPAWDMFSAY------NGMAAGFFNG-------DWGVLLTALASNNKNDILATPS 447 G S NP A+ G A+ F G D + ++AL S + ++++ P Sbjct: 512 G--SPNPDLTFPDAFAVNLPATGNASSFAVGLIADNLLDLDLEISALESLGEAEVVSQPK 569 Query: 448 IVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 IVT D + AS GQ+V + T + G L VTPQV D V+L + Sbjct: 570 IVTSDGQAASIFSGQNVAFPAEDGGT---------QFIEAGLNLNVTPQVTPDDKVILTL 620 Query: 508 EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 +V+ S + G +T T+ VLV+ G T+VLGG+ + V K P+LGD+P Sbjct: 621 -----TVNQDSLAAGGGAIDTNTVSTQVLVENGVTLVLGGVYRTEKTQLVEKAPILGDLP 675 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 +VG LF+ T+T + L++FI P +I++ Sbjct: 676 VVGNLFKRTTTSDERSELLIFITPKLIQN 704 >UniRef50_D0D8V3 General secretion pathway protein D n=1 Tax=Citreicella sp. SE45 RepID=D0D8V3_9RHOB Length = 320 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 32/290 (11%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 + AD N+L++ A Q ++ ++ LD QVL+EA I EV + LN+GV+W + Sbjct: 48 VAADTSRNALIVRATQEEHREITAMLRDLDTAARQVLLEATIAEVTLNDELNVGVRWYFQ 107 Query: 373 NVG-AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLL 431 N A +F++ +NGG+ P G +A G V L Sbjct: 108 NGDVATRFSDL---------------ENGGVAGNYP---------GFSAILSRGGANVAL 143 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN----VFNTVERKTV 487 ALA+ ++++P+++ +DN+ +G VP+ QT+S N V VE + Sbjct: 144 NALAAVTDVKVISSPTLMVVDNQEGLLQIGDQVPI--ARQTSSEANADAVVLTQVEYRDT 201 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETVVLG 546 G LKV P++ AV L+IEQEVS V ++ S + PT +TR + ++ G+T+ LG Sbjct: 202 GIILKVRPRIGADGAVNLKIEQEVSDVSATRTSGIDSPTISTRKVSTHAVLADGQTLTLG 261 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 GL+ + + ++VP LG +P+VG LFR + + L++ IRP ++ + Sbjct: 262 GLVQERDNKTRAEVPGLGRVPVVGTLFRAKDNAKDRTELIIMIRPRVVHN 311 >UniRef50_D1N173 Type II and III secretion system protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N173_9BACT Length = 794 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 149/634 (23%), Positives = 276/634 (43%), Gaps = 104/634 (16%) Query: 32 FNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVI 91 FN++ + + LG D ++ T+++ N +++E ++ F L L G I Sbjct: 135 FNSSPLVDTLPAFADILGFNFTADSDLKSTVTLNLNSRMTRRELWEAFDQTLQLAGAGAI 194 Query: 92 TLDNG-FLKVVRSANVKTSPGMIA--DSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 NG L+++ +A + PG A + +R G E+++ L NV A+D L+ + Sbjct: 195 R--NGQLLEIMPAAKL---PGRSALRNRNRLTSGAEVIS--YSLFNVTAKDAVAQLKPFL 247 Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK--QQIIHLE----YASA 202 V V SNV++L R I KL EV++ +D G + + ++H A A Sbjct: 248 SPAGVA--VEATRSNVIVLCDRLENIPKLKEVLELLDQPGRQNWPRAVVHCRNVKPSAIA 305 Query: 203 EDLAEILNQL---ISESHGKSQMPALLSAKIVADKRTNSLIISGP-EKARQRITSLLKSL 258 ++L+E+L L + + K+++P + ++ R L ++ E+A + + + + L Sbjct: 306 QELSEVLPVLGFPVVLATDKTEVPG--AVQLTGVDRIQILAVTAATEEAIKEVRNWISIL 363 Query: 259 D-VEESEEGNTRVYYLKYAKATNLVEVLT--------------------GVSEKLKDEKG 297 D + S + VY + + KA L + L+ SE+ + + Sbjct: 364 DNADSSTQERMYVYKVTHDKAEYLAQALSVIFSTQGTSLTVDTSFNRSNSTSEQTRTSQI 423 Query: 298 NARKP-----------------SSSGAMDNVA--------ITADEQTNSLVITADQSVQE 332 ++ S+ +D V+ + AD N LVI Sbjct: 424 TTQQTRNQNTNTNSQNRYSTNNQSNTELDLVSNVFNTPVRLFADGVQNRLVIRTTPRTYA 483 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQ--DGNGLNLGVQWANKNVGAQQFTNTGLPIFNAA 390 + ++ RLD+ AQVL + +IVE+ D N L QF N Sbjct: 484 MIKALLDRLDVVPAQVLFQILIVEITLTDSNEFGL------------QFNNVSYGGGTGV 531 Query: 391 QGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-----WGVLLTALASNNKNDILAT 445 ++ G S++ G G F+ D +G L ALA + ++++ Sbjct: 532 STGTNFNDIGMNDSSS---------EGFKLGIFDKDNPEENFG-YLRALAGRDNIKVISS 581 Query: 446 PSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVTPQVNEGDA 502 P ++ N A VGQDVP+L+ TTS NV + + G L + PQV D Sbjct: 582 PQLLVTSNTTAKIQVGQDVPILTQDLTTSDSATGNVTRSYTYEETGIILSLIPQVTSTDL 641 Query: 503 VLLEIEQEVSSV--DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 + ++IEQ+VS ++ +++T P +TR + A+ + G+T+V+GG++ + + +++ V Sbjct: 642 ISMQIEQKVSEAIKNTITSATDTPVISTRVLNTAMTIANGKTMVIGGMIQEKNNDRLQSV 701 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 P++ DIP + + F T+ + L+V + I+ Sbjct: 702 PIIADIPFLRRFFGNTNQSVERTELLVLVTGYIV 735 >UniRef50_Q7UX59 General secretion pathway protein D [Precursor] n=1 Tax=Rhodopirellula baltica RepID=Q7UX59_RHOBA Length = 1265 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 110/431 (25%), Positives = 190/431 (44%), Gaps = 48/431 (11%) Query: 209 LNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNT 268 L +L S S +S + L+ D RTNS+I SG + + + S+L LD E E T Sbjct: 624 LGELPSLSASESALTPLV---FSTDIRTNSIIASGSAEDLEVVESILLRLDSEGFAERIT 680 Query: 269 RVYYLKYAKATNLVEVLTG-VSEKLKDEKGNARKPSSSGAMD----NVAITADEQTNSLV 323 V +LK+ A N+ +T VS++ + + G +D ++ A+ QTNS++ Sbjct: 681 EVIWLKHQIAENVALAITNYVSQRAQSRNNITQFQQGLGPLDLPDRDIVAVAEAQTNSVL 740 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA---------NKNV 374 ++ + E++ +I RLD R VL++ +I EVQ +G +G ++ K Sbjct: 741 LSVSPRIYEEVRQLIDRLDRRPPMVLIKTLIAEVQLDDGFEIGGEFGLQDSLLFDRGKAT 800 Query: 375 GAQ-----------QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 GA F T + + NA + + GITS + +G+ +G F Sbjct: 801 GAIATGNPASDPGFNFGGTSVNLPNANSFGQENLASKGITSFGAGASQLTQLSGLNSGGF 860 Query: 424 -----NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP-----VLSGSQTT 473 + + L L N+ IL+ P I+T DN VGQ P +G Sbjct: 861 VFSAASESVNLFLRTLRVANRLQILSRPEIMTADNTEGFVQVGQSFPRPTELSFTGGTGG 920 Query: 474 SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG---------- 523 + +E + +G L+VTP+V + + I+ S ++++ +G Sbjct: 921 TASQPIIGIEDEEIGIILRVTPRVGADGMIFMAIDASRSDINNNEGQIIGAFQDDVPIFV 980 Query: 524 PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKR 583 P + Q + G+TVV GGL+ + + +VP L +IP+VG F++ S + Sbjct: 981 PAIDRTQAQATITAFDGQTVVFGGLIQKVRQNRTRRVPYLSNIPVVGTFFKFDSEIEQRS 1040 Query: 584 NLMVFIRPTII 594 L+V + P ++ Sbjct: 1041 ELLVVMTPILV 1051 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 24/238 (10%) Query: 155 NVVHYEPSNVLILTGRASTINKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAEILNQL 212 ++ + N L+L GR I + ++I+++D + T++ ++ L++ASA D + Sbjct: 368 SITALDSPNALLLIGRKEAIEAVNDLIEKIDQPIPETDRLRVFRLQHASATDAEATIQTF 427 Query: 213 ISESHG--KSQMPAL-LSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE-SEEGNT 268 + G + P L + +I AD RTNSLI+S + +T L++ +DV++ Sbjct: 428 FTNQPGGDEENRPGLGVRVRISADYRTNSLIVSASPRDLAEVTRLVEEIDVQKIPSTAEI 487 Query: 269 RVYYLKYAKATNLVEVL----TGVSEKLKDEKGNARKPSS-------------SGAMDNV 311 +V+ L A+A ++VEVL +G E + + A S SG ++ Sbjct: 488 KVFPLTNARAEDMVEVLQEAISGEPENIAGDTTAAATSLSIVSLNSPGNPILDSGILNGA 547 Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRA-QVLVEAIIVEVQDGNGLNLGVQ 368 ITAD N++V+ A + +I +LD LV+ +E D L +Q Sbjct: 548 VITADSNVNAVVVRAPAGGMPLIGELIRQLDQTPGIDSLVKVFTIENGDATQLTTALQ 605 >UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Proteobacteria RepID=Q489N5_COLP3 Length = 706 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 110/379 (29%), Positives = 177/379 (46%), Gaps = 37/379 (9%) Query: 233 DKRTN-SLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 DKR ++++ P E A + SL VEE + + YAKA S Sbjct: 348 DKRMQGNILMVAPSDELAAREAQSLQAKQQVEELATLYSEYLQINYAKAAEF-------S 400 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 E +K+E +S D +++ DE+TN+L+I E + +I LD+ QV+ Sbjct: 401 ELIKNE-------DTSILSDRGSVSVDERTNTLLIRDTAKSIEDIKRMITILDVPVRQVV 453 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNG--------- 400 +EA +V V+D LG++W N + T+ + ++A G G Sbjct: 454 IEARMVTVKDNMNEELGIRWGVTNTDGEFATSGSIEGASSANGTRGVTTPGVGQVPTIGD 513 Query: 401 GITSANPAWDMFSAYNGMAAGFFNGD-WGVLLTALASNNKNDILATPSIVTLDNKLASFN 459 G+ P + A NG + L+AL NK +++A+P I T + K A Sbjct: 514 GLNVNLPVANAAGTIAFQVARLANGTILDLELSALEKENKGEVIASPRITTANQKEAYIE 573 Query: 460 VGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN 519 G ++P + + + F +K V L VTP + D ++L++ V + D+ S+ Sbjct: 574 QGVEIPYQEAASSGATATQF----KKAV-LSLTVTPHITPDDKIILDL---VVTQDTISD 625 Query: 520 STLG--PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 T G P +T+ I VLV GET+VLGG+ VSK+P+LGDIP +G LFR +S Sbjct: 626 ITSGFAPAIDTQRIGTQVLVNNGETIVLGGIYQQAIISTVSKIPILGDIPYLGWLFRNSS 685 Query: 578 TERAKRNLMVFIRPTIIRD 596 K+ L++F+ P I+ + Sbjct: 686 QLNEKKELLIFVTPRIVTE 704 >UniRef50_B8E238 Type II and III secretion system protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E238_DICTD Length = 1421 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 145/612 (23%), Positives = 263/612 (42%), Gaps = 101/612 (16%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 ++A L+ + + +ADIR+ + +G+ +ID V G I D Sbjct: 882 AVVAKELLTVEREGDKVYVSCDLRSADIREVLRELGKKADINFVIDQKVTGQI-----DL 936 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 + + L+I+ G IT ++ V T P +A T+I Sbjct: 937 YLNRVELPEVLNIIQKVGKLSITTEDKVTYVKPYEEKVTVPVEVAK-----------TKI 985 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 L+ + D+ + ++ S+ + + + +LI G+ + L ++I R+DV Sbjct: 986 YALKYITLSDIERVGGSLVKNLSLS---YDDKTKLLIAQGKEDDLKVLDDLISRIDVEKK 1042 Query: 190 EK---QQIIHLE------YASAEDLAEILNQLISESHGKSQMPALLSAKIVA--DKRTNS 238 E ++++ +E Y S + + + +++ E K+ + ++ K+ D N Sbjct: 1043 EAVVAKELLTVEREGDKVYVSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNR 1102 Query: 239 LIISGPEKARQRIT----------SLLKSLD--VEESEEGN---TRVYYLKYAKATNLVE 283 + + + RIT + +K L+ V ++EG T+ Y LKY L Sbjct: 1103 VELPETLEILSRITNISFEKVGSATFVKPLNTTVTTAKEGTPTVTKEYKLKYISLDTLKS 1162 Query: 284 VLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDI 343 V++G+++ +V+ D+ + L++ + ++IA+LD Sbjct: 1163 VVSGIAK-------------------DVSFYYDQTSGLLLVQGPADQVSSVESMIAKLDK 1203 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT 403 QV ++ ++EV N ++G++W+ ++ +TGL I Sbjct: 1204 PTPQVKIDVQVIEVSRENVKDIGIEWSTGSI------STGLQI----------------- 1240 Query: 404 SANPAWDMFSAYNGMAAGFFN-GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 +AN W + N G + AL + NK ILA PS+ TL K +G Sbjct: 1241 TANLGW------QDLRVSIVNPGQISANIRALETQNKARILAQPSMTTLSGKATRIMIGD 1294 Query: 463 DVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL 522 VP++S G+ + V+ VG L VTP VN + I +VS++ + Sbjct: 1295 RVPLISYD--AQGNRQVSFVD---VGIILNVTPTVNADGTITANINPQVSTIQGYVSDV- 1348 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 P +TR Q V +K GET+ LGGLL + +SKVPLLGDIP++G+LF+ T++ + Sbjct: 1349 -PIISTREAQTIVNLKNGETLALGGLLRQEEIDSMSKVPLLGDIPILGELFKARKTQKVE 1407 Query: 583 RNLMVFIRPTII 594 R L++ I P +I Sbjct: 1408 RELIILITPKLI 1419 >UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadaceae RepID=B9MDF0_DIAST Length = 696 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 98/348 (28%), Positives = 176/348 (50%), Gaps = 26/348 (7%) Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITAD 316 +L +++ E T+ + L YAKA ++V LT S+ G + + S D + ++ Sbjct: 362 ALAIQKLEPLRTQAFQLNYAKAADMVTQLTMSSQGGSSTSGYSNRFLS----DRGSAISE 417 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN--- 373 +TN L +T + E++ ++A LD+ QV++EA IVE +D G +LGV+ + Sbjct: 418 PRTNQLFVTDTSAKLEEVRQLLATLDVPVRQVMIEARIVEARDTFGRSLGVRLGGGSRTG 477 Query: 374 ---VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMF--SAYNGMAAGFFNGDWG 428 VG + N P G++ + S F S +N A+ F + Sbjct: 478 GSAVGGT-YDNVAGP--TGGSGMSPFVSLPASLSGVSTVGSFALSIFNSNASRFLS---- 530 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVG 488 + L+A+ ++ + I+++P ++T D A G + P + + N T+ K Sbjct: 531 LELSAMEADGQGKIVSSPRLITADQTKALIEQGTEYPY-----SVTAPNGATTIAFKKAV 585 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGL 548 KL+VTPQ+ ++L+++ V+ ++T G +T+ I+ VL++ G TVV+GG+ Sbjct: 586 LKLEVTPQITPEGNIILDLD--VNKDSRGESTTQGVAIDTKHIKTQVLIENGGTVVIGGI 643 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 + Q +K+P+LGD+P+VG LF+ + E KR ++VFI P +I D Sbjct: 644 FEMEETNQENKIPVLGDVPVVGNLFKNRTKESTKREMLVFITPKVITD 691 >UniRef50_C1ZGU1 Type II secretory pathway, component PulD n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGU1_PLALI Length = 1445 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 131/507 (25%), Positives = 219/507 (43%), Gaps = 72/507 (14%) Query: 163 NVLILTGRASTINKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAEILNQLISESHGKS 220 N LIL+ +I L E+I+++D + ++ L A A L L QL S + Sbjct: 781 NSLILSAPEQSIPLLEELIRQLDQPTAAVAEIKVFTLTNADASQLVTQLQQLFSPGGNQQ 840 Query: 221 QMPA--------------------LLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV 260 L+ + D RTNS+ G +A + + ++L LD Sbjct: 841 GGGNNALRQQLGLAVAGADDASSNLIPLRFSVDTRTNSITAIGGAEALRVVEAILLRLDE 900 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTG-VSEKLKDEKGNARKPSSSGAMD-NVAITADEQ 318 + E V+ LK + A + +T V+ +L+ + N S+ ++ V + + Sbjct: 901 SDLRERKNVVFKLKNSPALAVSTAVTQFVNSQLQLSQQNPNLISTVEQLEREVVVVPETG 960 Query: 319 TNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ----DGNGLNLGVQ------ 368 TNSL+I+A +++ ++ LD QV+++A+IVEV D G+ LG+Q Sbjct: 961 TNSLLISATPRYYDEITRLVMELDQAPRQVIIQALIVEVTLDNVDEFGVELGLQDSVLFD 1020 Query: 369 -----------WANKNVGAQQFTNTGLPIFNAAQGVADYKKN---GGITSANPAWDMFSA 414 + Q T + AA G N G T+ NP+ Sbjct: 1021 RSVVDDLVTLTETTTSPNGTQTTTQRVVSQTAAPGFLFNNPNTPLGNNTTINPSSVGSQG 1080 Query: 415 YNGMAAGFFNGDWG--------------VLLTALASNNKNDILATPSIVTLDNKLASFNV 460 + + G N D G VL+ ALAS + +L+ P I TLDN+ A V Sbjct: 1081 LSSFSLGRVNNDLGYGGLVLSAGSESVNVLIRALASRRRLQVLSRPQIRTLDNQQAQIQV 1140 Query: 461 GQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS------- 513 GQ VP++ G Q + + + G L VTP+++ +++E+ E S Sbjct: 1141 GQQVPIVDGVQIGATGLANPQIRQDQAGIILTVTPRISPDGTIVMELIAEKSQFRGNGVP 1200 Query: 514 --VDSSSNSTL-GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 D+++ + + P + + A+ V G+TVV+GG++ + KVP +GDIP+VG Sbjct: 1201 IFTDATNGNVIESPIKDISAARTAISVPNGQTVVMGGMITATDETSERKVPFIGDIPIVG 1260 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDD 597 LFRY S + L++F+ P +I D Sbjct: 1261 HLFRYDSKSHVRTELLIFLTPRVISSD 1287 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 19/185 (10%) Query: 164 VLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED---LAEILNQL---ISESH 217 VLIL G + + ++++VI+ ++ + +H+ Y S D ++E+L + +++ Sbjct: 514 VLILRGNEADVEQVMKVIRELEALSENTAPQLHVLYLSHTDSPAMSELLTLVFDSLAKFP 573 Query: 218 GKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAK 277 G++ P A I D N+LII P+ I L + LD E V+ LK A Sbjct: 574 GRATQPRQNVAIIPVDT-PNALIIVAPKTDLDSILELAEELDQPTDPESEFEVFSLKTAV 632 Query: 278 ATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATV 337 A+ +V +T + G V AD ++NS+++ A +++ + Sbjct: 633 ASQVVTNITAFYA------------TRVGLGARVLAIADPRSNSVIVRARPRDLDQVKAL 680 Query: 338 IARLD 342 IA++D Sbjct: 681 IAKVD 685 >UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderiales RepID=A1VK17_POLNA Length = 712 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 115/392 (29%), Positives = 193/392 (49%), Gaps = 47/392 (11%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNL- 281 +L AK + ++T ++++ P E A + L + ++ E T+ + + YAKA+ + Sbjct: 343 ILQAKGLGMRKTGNVLLIAPKDELAAKDKQELEARVAIQNLEAVRTQSFQINYAKASEIA 402 Query: 282 VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 V++ G + AR S+ G+ + A+ +TN L +T S E++ IA+L Sbjct: 403 VQISAGGTGAT-----TARILSNRGS-----VIAEPRTNQLFVTDIPSRLEQVQNFIAKL 452 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQW-------------ANKNVGAQQFTNTGLPIFN 388 DI QVL+EA IVE D G +LGV+ N NV TN G + + Sbjct: 453 DIAVRQVLIEARIVEASDTFGRSLGVRLGGGTIGAAGALTRGNTNVSLG--TNYGATVAD 510 Query: 389 AAQGVADYKKNG-GITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPS 447 + + + G+ +A ++ + S +N A F N + L+AL ++ K I+++P Sbjct: 511 TSGNFVSFPASTLGVANAASSFAV-SIFNASANRFLNLE----LSALEADGKGKIVSSPR 565 Query: 448 IVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 +VT D A G + P QT + + RK KL+VTPQ+ ++L++ Sbjct: 566 VVTADQTKALIEQGTEFPY----QTATSSGATSLAFRKA-NLKLEVTPQITPEGNIILDL 620 Query: 508 EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS---KVPLLG 564 + V+ + G +T+ IQ VLV+ G TVV+GG+ F+ E+ + KVPLLG Sbjct: 621 D--VNKDSRGETTAAGIAIDTKHIQTQVLVENGGTVVIGGI---FTLEETNNEVKVPLLG 675 Query: 565 DIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 D+P +G LF+ K+ ++VFI P +I D Sbjct: 676 DVPYLGNLFKSRERTSRKQEMLVFITPKMITD 707 >UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMQ3_PELPD Length = 864 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 120/423 (28%), Positives = 195/423 (46%), Gaps = 57/423 (13%) Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL---IISGPEKARQRI 251 + LE+A AE + QL+SE K+ ++ D T ++ +++ P Q + Sbjct: 472 VTLEFADAE--VRKIFQLLSEVSNKNF--------VLGDDVTGTISIKLVNVPWD--QAL 519 Query: 252 TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR--KPSSSGAMD 309 +L + D+E E GN + A LV+ T +E +A+ KP +D Sbjct: 520 DIILDAKDLETREIGNVLTIKKRGAFKEQLVKQTT-YTEYFSVNYSDAKSIKPQLEALLD 578 Query: 310 NV-------AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 V ITAD++TN++++T+ QS +++ + ++DI QV++EA IVE Sbjct: 579 PVLLKEKLATITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQVMIEARIVEATSTFT 638 Query: 363 LNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 +LGV W +T+ + Q + GGIT+A P S A G Sbjct: 639 RSLGVNWG------VHYTDASGSLLGITQLDTGF---GGITTAPPT----SGTGDSAGGN 685 Query: 423 FNGDWGVL---------LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 +G L L+A A+ I++ P + TL+NK A GQ +P + + Sbjct: 686 MGISFGALGNGVQLDMRLSAAATAGLIKIISCPKVATLNNKKAKIAQGQQIPYTA----S 741 Query: 474 SGDNVFNTVERKTV--GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTI 531 GDNV E K V L+VTP +N + + I + S+ + S+ P NT+ Sbjct: 742 DGDNV----ETKFVEAALSLEVTPHINANGTISMNIVAKNDSMGDAVGSSTAPAINTKEA 797 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 +L++ GET V+GG+ D + + VP L DIP +G+ F+ S + K L+VFI P Sbjct: 798 TTEMLLRDGETTVIGGIFVDTDNDSDAGVPFLMDIPAIGKFFKTNSKTKTKTELLVFITP 857 Query: 592 TII 594 I+ Sbjct: 858 RIM 860 >UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammaproteobacteria RepID=PILQ_PSEAE Length = 714 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 94/341 (27%), Positives = 162/341 (47%), Gaps = 38/341 (11%) Query: 273 LKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQE 332 + YAKA ++ ++ V+ + G K G+ IT D++TNS++ Q + Sbjct: 384 VNYAKAADIAKLFQSVTS----DGGQEGKEGGRGS-----ITVDDRTNSIIAYQPQERLD 434 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA-------------NKNVGA--Q 377 +L ++++LDI QV++EA IVE G +LGV+W + N+G + Sbjct: 435 ELRRIVSQLDIPVRQVMIEARIVEANVGYDKSLGVRWGGAYHKGNWSGYGKDGNIGIKDE 494 Query: 378 QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS--AYNGMAAGFFNGD--WGVLLTA 433 N G PI G + G S +P D+ + A +G+ GF + + L+A Sbjct: 495 DGMNCG-PI----AGSCTFPTTGTSKSPSPFVDLGAKDATSGIGIGFITDNIILDLQLSA 549 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 + +I++ P +VT D + A G +VP S + + F K L+V Sbjct: 550 MEKTGNGEIVSQPKVVTSDKETAKILKGSEVPYQEASSSGATSTSF-----KEAALSLEV 604 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 TPQ+ + +++E++ + D + P N + +LV GET+V+GG+ + Sbjct: 605 TPQITPDNRIIVEVKVTKDAPDYQNMLNGVPPINKNEVNAKILVNDGETIVIGGVFSNEQ 664 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 + V KVP LG++P +G+LFR + K L+VF+ P I+ Sbjct: 665 SKSVEKVPFLGELPYLGRLFRRDTVTDRKNELLVFLTPRIM 705 >UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS Length = 700 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 144/292 (49%), Gaps = 26/292 (8%) Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 D TN+L++T +QSV +K +I LD+ QV+VEA IVE DG +LGV++ + G Sbjct: 413 DPATNTLIVTDNQSVIQKFERLIDELDVPAKQVMVEARIVEAADGVSRSLGVKFGARRNG 472 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSA----NP--------AWDMFSAYNGMAAGFF 423 A + +N + + + N G ++ NP A S + AAG Sbjct: 473 ATSWGGD----WNNSIALNNRSTNSGTSTGGVAFNPNVNLPVASATSSISVIHSWAAGAL 528 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVE 483 G+ L+A+ + N ++TP ++T D K A G +P + S F Sbjct: 529 ----GLELSAMETENLTKTISTPRVLTQDRKEAEIRQGTQIPYTTRSSDGDSSTAF---- 580 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVLVKTGET 542 K LKVTP++ ++L+I D ++ + G P TR ++ +++ G T Sbjct: 581 -KDAVLSLKVTPRITPDSKIILDIAINKDEPDYNNVNAEGEPGIVTRAVKTQAMIEDGAT 639 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 +V+GG+ + VSKVPLLGDIP++G LF+ S R++ L+ FI P I+ Sbjct: 640 LVVGGIYQEQMANNVSKVPLLGDIPVLGNLFKSRSRSRSRNELLFFITPRIM 691 >UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=Acinetobacter RepID=Q6F7E3_ACIAD Length = 723 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 102/356 (28%), Positives = 168/356 (47%), Gaps = 39/356 (10%) Query: 268 TRVYYLKYAKATNLVEVLT-----GVS----------EKLKDEKGNARKPSSSGAMDNVA 312 T LKYAKA ++ +++T G S E L D G P + Sbjct: 374 TEYILLKYAKAADIEKLITQGRNSGTSNSNTNGSATVEPLGDSVGTLLSPRGT------- 426 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 I+ D +TN+L+I +++ +I LDI QV++EA IV +GV+W Sbjct: 427 ISLDPRTNTLIINDTSQKIDQIRKMIDLLDIPVKQVMIEARIVRATTSFSKEMGVKWGIL 486 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYK---KNGGITSANP---AWDMFSAYNGMAAGFFN-- 424 + G Q N+ L + + + + + NG T P D+ G ++ F Sbjct: 487 SQGINQ--NSNLLVGGSETTLWNLRNPDSNGTYTIERPDNLNVDLGVTTTGASSIAFGLI 544 Query: 425 --GDW--GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN 480 D+ + L+AL ++ ++++TP +++ D + A G +VP S + + +G Sbjct: 545 SLSDFMLDLELSALQADGYGEVISTPKVMSADKQKAKVATGVEVPYQSTTNSAAGSTA-- 602 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTG 540 T K L+VTP + +L+E+ S++S + + N TI VLV G Sbjct: 603 TTSFKEALLSLEVTPNITPDGKILMELNIANDSINSYAQNGEA-ILNKNTINTNVLVNNG 661 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 ETVVLGG+ + + V+KVP LGD+P VG+LF+ T+ AK L++F+ P I+ D Sbjct: 662 ETVVLGGVFEQTTNNAVTKVPFLGDLPYVGRLFKKTAKSEAKNELLIFVTPRIVND 717 >UniRef50_B1XUD4 Type II and III secretion system protein n=1 Tax=Polynucleobacter necessarius subsp. necessarius STIR1 RepID=B1XUD4_POLNS Length = 509 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 106/331 (32%), Positives = 154/331 (46%), Gaps = 28/331 (8%) Query: 269 RVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQ 328 R+YY K A +E + G G A ++ + IT DE+ NS+++ Q Sbjct: 201 RLYYTKPAIVKKQLEAIFG------GNTGAAGAQATRPPGGIIEITTDERINSIIVKGTQ 254 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV-GAQQFTNTGLPIF 387 S E +A +I++LDIR +VL+EA IVE D LG ++ +N G TN P Sbjct: 255 SEMELVAKLISKLDIRTQEVLIEAFIVEADDDWQYELGSRFGYRNTTGNGTSTN---PTS 311 Query: 388 NAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN--GDWGVLLTALASNNKNDILAT 445 V D N I S + A G+ F V LTA+ + I++ Sbjct: 312 AVGGAVGDLA-NANIFSR----PVTGAPFGLGYLFQTTASQLKVELTAMEKLSLVKIISN 366 Query: 446 PSIVTLDNKLASFNVGQDVPV-LSGSQTTSGDNVFNTVERKTVGTKLKVTPQ-VNEGDAV 503 P + T+DN+ A G +P + G T T E K KL TP V +G+ Sbjct: 367 PHVFTMDNEEAVVIDGVQIPYPVPGVGTNQ-----ITYEFKDAALKLTATPSIVGDGNLF 421 Query: 504 LLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 L + + DS + ST P+ N R +++ +L++ G V+GG+ D + V KVPLL Sbjct: 422 L----NMIVNKDSPNYSTSPPSINKREVRSKLLIQDGTIAVIGGIYDQTKENTVEKVPLL 477 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 G IPL+G LF YT K L+VFI P I+ Sbjct: 478 GSIPLLGSLFSYTRKADKKTQLLVFIAPKIL 508 >UniRef50_A1ASI5 Type II and III secretion system protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASI5_PELPD Length = 386 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 142/277 (51%), Gaps = 14/277 (5%) Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QVL++ + ++ NLGV + KN A F+N I + +G I++AN Sbjct: 109 QVLLQVKVAQIDKTALKNLGVSFLVKNQNANGFSNM---IGAPSTSSTSASGDGTISTAN 165 Query: 407 PAWDMFSAYNGMAAGFFNGDWGV--LLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464 D FS+ N G + GV ++ ALA+ ILA P++V + F G + Sbjct: 166 GIIDGFSSLNPYTMGITHFPSGVSAVIKALATKGMAKILAEPNLVVKSGQKGEFFAGSRI 225 Query: 465 P--VLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQ-EVSSVDSSSNST 521 P VL + +TS ++ + VG KL P V E + LE++ EVS++ + + Sbjct: 226 PFSVLENTGSTSTP----SIRWEEVGVKLNFKPFVMESGTIALELDPVEVSNIQGTLETN 281 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 P +TRTI+ + ++ GE++VL GLL D + + +SKVPLLGDIP++G LFR T E+ Sbjct: 282 GYPVIDTRTIKTSAELRDGESLVLAGLLRDETYKSISKVPLLGDIPILGALFRTTENEQK 341 Query: 582 KRNLMVFIRPTIIRDD--DVYRSLSKEKYTRYRQEQQ 616 + L+ FI P ++ + V L +K QE++ Sbjct: 342 ETELVFFITPKLVMPEVPGVKVELPTDKQLTPEQEKE 378 >UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3G3_9GAMM Length = 672 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 35/388 (9%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 +L K +A ++ ++++ P E A + L + E E T + +K+AKA +L+ Sbjct: 300 ILKTKGLAMRQNGNVLMVAPAAEIAAREKQELEAQKQLVELEPLYTEIVEIKFAKA-DLL 358 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVI--TADQSVQEKLATVIAR 340 L K G + S G+ IT D++TNSL+I TAD V + VI Sbjct: 359 ATLLRTDGKQGGNSGQSGFLSPRGS-----ITIDDRTNSLLIRDTADNLVD--IRQVIDE 411 Query: 341 LDIRRAQVLVEA-IIVEVQDGN---GLNLGVQWANKNVGAQQFTN-TGLPIFN------A 389 LD QVL+E+ I++ D N G+ G + +GA + TGL Sbjct: 412 LDKPVRQVLIESRIVIANNDFNKELGVRFGTSAQSNTLGAGSSGSLTGLSTNPNNDDQIR 471 Query: 390 AQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIV 449 A V N + +NP+ + A + G + L+A+ + K +++++P ++ Sbjct: 472 ANSVVGNDLNVNLPVSNPSGSIGLALAKLPLGMI---LELELSAMQAEGKGEVISSPRVI 528 Query: 450 TLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQ 509 T + + A+ G ++P T+SG V K KL VTPQ+ D +++++E Sbjct: 529 TSNQQQATIEQGTEIPYQEA--TSSG---ATNVSFKEAVLKLDVTPQITPDDRIVMDLE- 582 Query: 510 EVSSVDSSSNSTLG-PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPL 568 S D LG P+ +TR+++ VLV GETVVLGG+ + + + V +VP GD+P Sbjct: 583 --VSKDEVGEVFLGVPSIDTRSVKTQVLVDNGETVVLGGIYEQSTNDNVERVPFFGDLPY 640 Query: 569 VGQLFRYTSTERAKRNLMVFIRPTIIRD 596 VG LF+ T E KR L+VF+ P I+++ Sbjct: 641 VGFLFKNTFKEDRKRELLVFVTPKIVKE 668 >UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae RepID=COME_HAEIN Length = 445 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 98/339 (28%), Positives = 163/339 (48%), Gaps = 30/339 (8%) Query: 273 LKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQE 332 L +AKA+ L++ LT S G+ P+ S IT D+++N LVI + + Sbjct: 127 LHFAKASELMKSLTTGS-------GSLLSPAGS-------ITFDDRSNLLVIQDEPRSVQ 172 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG 392 + +IA +D Q+ +EA IV + D + LGV+W N G N+ + Sbjct: 173 NIKKLIAEMDKPIEQIAIEARIVTITDESLKELGVRWGIFNPTENARRVAGSLTGNSFEN 232 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL-LTALASNNKNDILATPSIVTL 451 +AD T+ PA + + NG L L+AL N +I+A+P ++T Sbjct: 233 IADNLNVNFATTTTPAGSI-----ALQVAKINGRLLDLELSALERENNVEIIASPRLLTT 287 Query: 452 DNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 + K AS G ++P + ++ N +VE + L+VTP +++ + +LL++ V Sbjct: 288 NKKSASIKQGTEIPYI----VSNTRNDTQSVEFREAVLGLEVTPHISKDNNILLDLL--V 341 Query: 512 SSVDSSSNSTLGP----TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 S S G + + + I V K GET+VLGG+ D + KVPLLGDIP Sbjct: 342 SQNSPGSRVAYGQNEVVSIDKQEINTQVFAKDGETIVLGGVFHDTITKSEDKVPLLGDIP 401 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKE 606 ++ +LF S KR L++F+ P I++ + +L ++ Sbjct: 402 VIKRLFSKESERHQKRELVIFVTPHILKAGETLEALKQK 440 >UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7T3_CHRVI Length = 787 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 109/436 (25%), Positives = 203/436 (46%), Gaps = 68/436 (15%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 +L K +A ++ ++++ P E A Q + +EE T + YAKA ++ Sbjct: 361 ILKTKGLAMRQNGNVLMVAPAQELAAQEQLEMESMQKIEELAPLRTEFIQVNYAKAADIA 420 Query: 283 EVLTGVSEKLKDEKG-NARKPSSSGAMDNV------------------------AITADE 317 VL+G + +AR+ ++ D V ++T DE Sbjct: 421 AVLSGAGRAASNPASPDARQTGTATRRDQVGASGLAQVAAAAGVSDRGILSPRGSLTFDE 480 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW----ANKN 373 +TN+L++ + E++ V+ LD+ QV++E+ +V + +LGV++ + Sbjct: 481 RTNTLIVQDTLTALEEVRRVVNLLDVAVRQVMIESRVVIANNSFARDLGVRFGVSGSMGK 540 Query: 374 VGAQQFT--------------NTGLPIFNAAQG------VADYKKNGGITSANPAWDMFS 413 VG + ++G NA+ G + D N + + PA + Sbjct: 541 VGDNEVLIGGGQNGYLAVGDYDSGPFGLNASTGTPYNSTLTDDAGNATLITNLPATTIQD 600 Query: 414 AYNGMAAGFFNGDWG-----VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS 468 A +G + F G G + L+A+ + +I+++P ++T D A+ VG ++P Sbjct: 601 AASG-SIDFLIGKVGSYLIQLELSAMQREGRGEIISSPRVITADKNKATIKVGSEIPY-- 657 Query: 469 GSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNT 528 Q SG + ++ V +L VTPQ+ D +++++E D S + P +T Sbjct: 658 --QEQSGQGNTSIAFKEAV-LQLDVTPQITPDDRIIMDLEVRKDRPDWSRSINNTPPIDT 714 Query: 529 RTIQNAVLVKTGETVVLGGLLD---DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 R+++ V++ GETVVLGG+ + FSKEQV P LGD+P++G+LF+ + + + L Sbjct: 715 RSVKTNVVIDNGETVVLGGVFEREKTFSKEQV---PWLGDVPVLGRLFKQEARQDSNTEL 771 Query: 586 MVFIRPTIIRDDDVYR 601 ++F+ P I++ D V R Sbjct: 772 LIFVTPKILKSDLVER 787 >UniRef50_B2IBK3 General secretion pathway protein D n=2 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IBK3_BEII9 Length = 803 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 90/307 (29%), Positives = 153/307 (49%), Gaps = 24/307 (7%) Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ-W 369 + IT D TNSL+I A++ + I +D QV +E + EV + LN GVQ + Sbjct: 510 IRITPDISTNSLLIHANRLDYRLIERTIHAMDRPPVQVEIEVTVAEVTLTDALNYGVQAY 569 Query: 370 ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN-PAWDMFSAYNGMAAGFFNGDWG 428 N + G+ Q + GI++A+ P A N M N Sbjct: 570 LNSSAGSLQMLGSA-----------------GISNASIPLVTPHPAVNLMIGQIANPR-- 610 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT---TSGDNVFNTVERK 485 V++ AL++ +L+TPS+V LD + A VG VP+LS T T+ + N+V K Sbjct: 611 VVINALSNITDVKVLSTPSLVVLDRQPAVLQVGNQVPILSQQATSTQTANPAIVNSVNYK 670 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 G L V P+VN V L+IEQ++S+V + + L PT + R +++ + + G+TV+L Sbjct: 671 DTGIILNVLPRVNANGVVALDIEQQISAVTNPDPTNLTPTISQRRVRSTIAIPNGQTVLL 730 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GL+ + + S +P++ I + L ++ ++ L++FI+P I+R+ + +S+ Sbjct: 731 AGLIQETTNGTRSGLPIISKIRFLNDLVTNHNSSDSRTELIMFIKPQILRNGFDSQQVSE 790 Query: 606 EKYTRYR 612 E R + Sbjct: 791 EFRERLQ 797 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 29/296 (9%) Query: 28 YGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 Y NF NA+ ++ ++G L +IDP V G IS+ S+ ++ + S L Sbjct: 148 YQLNFENAEATAVIKTVLGDVLQVNYVIDPRVNGQISLTSSRPVPRKSLIRLLESALSGI 207 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 +VI NG +VV + + T I + G+ ++ ++NVP +A R Sbjct: 208 N-AVILKQNGLYRVVPAGDATT----IQNVHYHEAGEGFGVTVIGMKNVP---VALAGRV 259 Query: 147 MMDAGSVGNVVHYEP-SNVLILTGRASTINKLIEVIKRVDV--IGTEKQQIIHLEYASAE 203 + GS G V E SN+LI G AS ++ VDV + T I+ L ++ + Sbjct: 260 LEGLGSRGGSVRMEADSNLLIFQGTASERQAALDAASMVDVDWLKTRSVAILPLTNSAPD 319 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL----IISGPEKARQRITSLLKSLD 259 + +++++ G LS IV + N L +S A ++T + LD Sbjct: 320 TVIAEVHRILGTGEGG------LSKDIVQMQPINRLNAVLAVSRNHAAIDKVTRWVSKLD 373 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGV-----SEKLKDEKGNARKP--SSSGAM 308 + VY L+YA A N+ +L + + +D+ N +P SSS +M Sbjct: 374 KADYAALGVNVYKLQYANAKNVAAMLNQIYGGSGGQTGQDQDKNVLQPGDSSSSSM 429 >UniRef50_B3TCB2 Putative bacterial type II and III secretion system protein n=2 Tax=environmental samples RepID=B3TCB2_9ARCH Length = 648 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 100/339 (29%), Positives = 154/339 (45%), Gaps = 30/339 (8%) Query: 258 LDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADE 317 L+ +SE+ T V + +A T L L NA K + A+ IT D Sbjct: 335 LNERDSEDLVTEVVRVNHADITELSTSL------------NALKSARKDAL----ITIDT 378 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ 377 +TN+L++ + + + I LDI QVL+EA IVE+ LG+ W N Sbjct: 379 RTNTLILNDLRHHVDDMLETIKILDISTPQVLIEAKIVEISKTFSQELGISWGLVNPEPG 438 Query: 378 QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD--WGVLLTALA 435 T TG F+ Q + D + I + N A ++ + GF G+ V L AL Sbjct: 439 FPTVTGNSTFDT-QFLVDLRPTVDIATGNVA-----GFDSLIQGFLPGNIALNVRLEALE 492 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTP 495 + K ++++P + T DNK A G+D+P Q S + N+++ L VTP Sbjct: 493 KSGKGRVISSPRVTTADNKEARVLSGRDIPY----QVNSVEG--NSIQFVNAELSLTVTP 546 Query: 496 QVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 V +++ + I+ ++ D + + PT + + VLV GET VL G+ + S E Sbjct: 547 HVTSDNSIYMTIDATKNAADFAQLAAGIPTITRKEMHTEVLVGNGETTVLAGIYESTSTE 606 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 VP +PLVG LFR + L+VFI PTI+ Sbjct: 607 NKKAVPWFSKLPLVGFLFRAFDDKDTINELLVFITPTIV 645 >UniRef50_Q6MB50 Putative component D of type II secretion pathway n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB50_PARUW Length = 953 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 100/375 (26%), Positives = 162/375 (43%), Gaps = 60/375 (16%) Query: 270 VYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITAD-------EQTNSL 322 +Y L+Y K +V L + E L+ + N+ + A E +NSL Sbjct: 562 IYKLRYRKGEQIVMALRRIGESLQ-----------MTGLANLDLIASINSSQWIESSNSL 610 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK-----NVGAQ 377 + T E++ +I +D QV +E +I++ + L GV W ++ G Q Sbjct: 611 IFTGTVPALERIKELILEIDTPLRQVFIEMLILDTTITDSLTYGVDWGSRFGGGNTAGGQ 670 Query: 378 QFTNTGLPIFNAAQGVADYKKNGGITSA---NPAWDMFSAYNGMAAGFFN---------- 424 F TG G+ G +T+A NP D + +G AG Sbjct: 671 NFLGTG-------SGLV-----GSLTNAITNNPIVDTVLSGDGYTAGIIGRHLTHGGLHF 718 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS-GDNVFNTVE 483 G L+ A+ S+ K +I+ P IVT DN A VG + S G + N + Sbjct: 719 STIGALVKAIHSDTKINIIMNPKIVTEDNNTAEVFVGSTDRYKTQSIANDIGSVITNNFQ 778 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-----------PTFNTRTIQ 532 VGT L+VTP + + L+I QEV++ ++N +G P + Sbjct: 779 FIDVGTTLRVTPLIGNNGIITLDIIQEVTNDGGNANPNVGNNPSVVDVNLVPVLSKSRTV 838 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 V V G V+L G++ V+++P LG +PL+G + + S +KRNLM+FIRP Sbjct: 839 TKVHVPDGFFVILSGMIQSTESRSVNRIPCLGGLPLIGGISKQKSNRDSKRNLMIFIRPL 898 Query: 593 IIRDDDVYRSLSKEK 607 I+ ++ S++K + Sbjct: 899 IVDTEEDLESVTKRQ 913 Score = 41.6 bits (96), Expect = 0.089, Method: Compositional matrix adjust. Identities = 58/267 (21%), Positives = 121/267 (45%), Gaps = 28/267 (10%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILID-PSVQGTISVRSNDTFSQQEY 75 +P G E NFNN + +++ + + K + D +Q +++ S + S + Sbjct: 202 VPSNGQGLKE-ISINFNNVSMIEYIRFISRISNKNFIFDDEDLQFNVTIVSEEPTSVENL 260 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD-ELVTRIVPLEN 134 L L + +I N + + R++ V+ ++ + P + E+VTR+ L Sbjct: 261 MAALLQELRIRDLLLIEQGNNLI-IHRNSRVRAPSRIVFSGTEPTTFETEIVTRVFRLNT 319 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD------VIG 188 + + ++R ++ ++ V+ SN LI+T + +NK+ ++I +D ++G Sbjct: 320 LDPLKASEIIRPLLSEDALIEVLRD--SNNLIITDLVTNVNKIAQLISTLDAPNSGVIVG 377 Query: 189 TEKQQIIHLEY-ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 Q ++ + AS DLA + Q I++ + P +L V TNS+ I Sbjct: 378 ---QYVVRNAFVASLADLATKILQPIAQGN-----PFVL----VPHSSTNSIFIVSNPFI 425 Query: 248 RQRITSLLKSLDVEESEEGNTRVYYLK 274 + ++L++LD+ EG T++ L+ Sbjct: 426 VDKTLAILENLDI---NEGKTKILDLE 449 >UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax=Methylophilaceae RepID=Q1GYG5_METFK Length = 723 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 101/417 (24%), Positives = 189/417 (45%), Gaps = 76/417 (18%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 ++S+K + ++T ++I P E A + L S +EE E T V+ L+Y KA N Sbjct: 329 IMSSKGLTQRKTGNVIWVAPSDEVAAKEKLLLEASQQIEELEPMRTEVFTLRYQKAENFK 388 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 +++ +K+ ++G+A D +TN++ + E++ ++I ++D Sbjct: 389 NIISDSKQKILSKRGSA--------------VVDARTNTVFVQDTAKHLEEVQSIINKID 434 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQW--------------------------------- 369 I QV++E+ +V + G +LG ++ Sbjct: 435 IPVKQVMIESRLVIADEKFGRSLGARFGVQKQQASGDTRYGSSGTLGNTITQRTVDPTTG 494 Query: 370 ------ANKNVGAQQFTNTGLP----IFNAAQGVADYKKNGGITSA--NPAWDMFSAYNG 417 AN+ VG+ T +P + + G D N + +A N A+ +F Sbjct: 495 VITETIANR-VGSSTLATTSIPGTVGVGVSPDGAQDLNVNLPVANAFGNFAFSLFR---- 549 Query: 418 MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN 477 + AGF + L+AL ++ + I+++P + T + + A G +P T+SG Sbjct: 550 LPAGFL---LNLELSALETDQRGKIVSSPRVTTANQQKAIIEQGTQIPFQQA--TSSGAT 604 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLV 537 V+ K L+VTPQ+ + +++++E + V N+ P+ +T+ +Q VLV Sbjct: 605 A---VQFKNASLSLEVTPQITPDEKIIMDLEVKKDKVGVVFNNV--PSIDTQRVQTQVLV 659 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 GET VLGG+ + + V KVP GD+P +G +F+ + K L++FI P ++ Sbjct: 660 ANGETAVLGGIYEQTERNDVDKVPFFGDLPFLGNVFKRRVKQSDKTELLIFITPKVM 716 >UniRef50_UPI0001745622 probable general secretion pathway protein D n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745622 Length = 888 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 28/303 (9%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 I AD N++++ + Q+K+ ++ +LD + QV + +I ++ +G+ +GV + K Sbjct: 539 IIADPLANAIIVIGPKENQDKVDLLLDKLDRKSPQVYLATVIGQLTLSDGMQMGVDYLQK 598 Query: 373 NVGAQQFTNTGLP-IFNAAQ-------GVADYKKNGGITSANPAWDMFSAYNGMAAGFFN 424 V +N+GL F A + VAD + N IT+A F+ Y G Sbjct: 599 FVSTG--SNSGLSSAFIAGREEIITNNNVADMRDNL-ITTALANAKGFNIY-----GQLG 650 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN------V 478 V ++AL + N +L+ PS+ L+NK A GQ +PV S + N V Sbjct: 651 QSLDVFVSALETTNNFKVLSRPSVFALNNKRAVITSGQSIPVPESSLANASSNNNGTGNV 710 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG----PTFNTRTIQNA 534 T+ K V KL+V P +N V L + Q +V N + P T I Sbjct: 711 TTTITYKDVVLKLEVIPLINPDGDVTLRVAQVNDTV--VGNQIVAQNNVPIIGTEQIATT 768 Query: 535 VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 V V TG TVVLGGL+ + K+ +P+L IP +G+LFR T + ++ L++FI+P ++ Sbjct: 769 VTVPTGNTVVLGGLITETDKKDTEGIPVLSRIPGLGRLFREDVTSKERKELVIFIQPMVV 828 Query: 595 RDD 597 DD Sbjct: 829 NDD 831 >UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2F0_9DELT Length = 514 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 99/342 (28%), Positives = 154/342 (45%), Gaps = 44/342 (12%) Query: 267 NTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITA 326 TRV +++++ +L E LT + + D++GN R ++T D T SLVI Sbjct: 193 QTRVVPVRFSEPASLAESLTPMLSR--DKEGNPRG----------SVTVDRHTRSLVIRD 240 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPI 386 E+L + + +D QVL+EA I+E LGVQW + G Q+ ++ Sbjct: 241 TAENLERLTSFLQEVDQATPQVLIEAHIIETNQEVARELGVQWGSFWRGQQRVSDAA--- 297 Query: 387 FNAAQGVADYKKNGGIT--SANPAWDMFS--AYNGMAAGFFNGDWG-----VLLTALASN 437 GG T + NP + +S G GF+ + L AL Sbjct: 298 -------------GGFTYQAGNPIGEQYSLDVLTG-EVGFYTASVAGNILEMQLQALQRE 343 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQV 497 K +IL+ PS+ TLDN A G +VP S T+ +V+ K +L VTPQV Sbjct: 344 GKVNILSRPSVATLDNHEAVLESGTEVPYQSIEDGTT------SVQYKDAVLRLLVTPQV 397 Query: 498 NEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQV 557 + + L+IE + VD + P + Q ++V+ G TVV+ GL + Sbjct: 398 ISRENIKLKIEAQKDEVDLTRTVMGNPFIIKKLAQTNLIVEDGSTVVIAGLAKERQASSS 457 Query: 558 SKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 + VPLL +IP +G FR + L++FI P I+ D++ Sbjct: 458 TGVPLLKNIPGLGVFFRSDARAGEFEELLIFITPRILSADNL 499 >UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein n=19 Tax=Francisella RepID=Q14H71_FRAT1 Length = 594 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 111/385 (28%), Positives = 173/385 (44%), Gaps = 34/385 (8%) Query: 222 MPALLSAKIVADKRTNSL--IISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKAT 279 M +L +K +A K+ +S+ + + E A Q L +E + T L Y A Sbjct: 228 MNIVLVSKGLATKKMSSILYVATAAEIAAQEQLELQTKRSLENNATLVTEFIPLNYTTAQ 287 Query: 280 NLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIA 339 V+T +++ + G P S ITAD +TN+L++T + ++ V+ Sbjct: 288 AAQTVITSMAK----QNGGIMSPRGS-------ITADARTNTLIVTDTEEKLPRIKEVVN 336 Query: 340 RLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKN 399 +DI QVL+EA IVEV + L LG + + + N GL FN+ A Sbjct: 337 EIDIPNDQVLIEARIVEVLRTSALELGFNYGVVDPSGR--VNIGLDTFNSNPNPAPGPTP 394 Query: 400 GGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT----ALASNNKNDILATPSIVTLDNKL 455 D F A G GV L AL S + + +A+P +V +N++ Sbjct: 395 ---GPTPTPVDTFVGTTAKLAYTIAG--GVRLEMEVRALESESLAEEVASPHLVVANNQV 449 Query: 456 ASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD 515 A G+DVP + + + F + +L+VTPQ+ ++++I +SV Sbjct: 450 AFIKDGEDVPYNQATASGAAAVAF-----QEAVLELQVTPQIAPDGNIIMDILVTKNSVG 504 Query: 516 SSSNST-----LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 +S T L P R I V+ K G+TVV+GG+ KE+ +K+P LGDIP +G Sbjct: 505 ASPGKTPQGGDLPPIIKKREITTKVMTKDGDTVVIGGIYQKTQKEERNKIPFLGDIPYLG 564 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIR 595 LF YT L++FI P II Sbjct: 565 YLFSYTKITDQDSELLIFITPKIIE 589 >UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Tax=Idiomarina RepID=Q5QV49_IDILO Length = 427 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 97/347 (27%), Positives = 170/347 (48%), Gaps = 57/347 (16%) Query: 262 ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNS 321 +S E ++ + + +AKA++L ++L K+E+ + P N A++ D +TN+ Sbjct: 121 DSNEYHSILLSVNFAKASDLAKLL-------KNEQQSFLSP-------NGAVSVDARTNT 166 Query: 322 LVITADQSVQEKLATV---IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQ 378 L++ + E+LAT+ + LD+ QVL+EA +V V+ LG++W G + Sbjct: 167 LIL---RDTPEQLATIRQLVNDLDVPVKQVLIEARMVTVKANVSKELGIRW-----GVSE 218 Query: 379 FTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL-------- 430 + GL I + + K + D+ +A AG F+ + L Sbjct: 219 Y---GLAI---PEDAGSFVKGMQV-------DLPTA---APAGTFSANLARLSDDILLDL 262 Query: 431 -LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 LTAL NK +I+ +P I T + + A G ++P + + + V+ K Sbjct: 263 ELTALEQENKAEIITSPKIFTSNQQPAYIEQGTEIPYVETAAHGA-----TAVQFKKAVM 317 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT--FNTRTIQNAVLVKTGETVVLGG 547 L VTPQ+ + VL+E+ ++ + + GP +T+ + VL K GET+VLGG Sbjct: 318 GLSVTPQITPNNHVLMELTITQNTRGDTVATPTGPAVAIDTQEMSTRVLAKNGETIVLGG 377 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 + + + S+VP+LG +PL+G+LF + KR LM+F+ PTI+ Sbjct: 378 IFQEHNLNDDSRVPILGSLPLIGKLFSHQQQRDEKRELMIFVTPTIL 424 >UniRef50_A9H699 General secretion pathway protein D n=3 Tax=cellular organisms RepID=A9H699_GLUDA Length = 772 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 91/308 (29%), Positives = 154/308 (50%), Gaps = 32/308 (10%) Query: 306 GAMDNVA----------ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 G +DN A I ++ Q N++++ + + ++ R+D+ QV ++A+I Sbjct: 432 GGLDNTASAEGRPQAMRIISNSQHNAILVYGTDQESDTVEQMLRRIDVMPLQVRIDAVIA 491 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 EVQ + L G Q+ K+ G +T + IT+ A FS Sbjct: 492 EVQLNDALQYGTQFFFKSGGINGVLST---------------NSQTITTGTLATAAFSHT 536 Query: 416 --NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 + G G + AL + +L++P ++ DN+ A VGQ VPV GSQ++ Sbjct: 537 LPGFIIGGASGGGAPFAIDALQNVTTVHVLSSPQLMVQDNRAARLQVGQLVPVQIGSQSS 596 Query: 474 S-GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD----SSSNSTLGPTFNT 528 + G +++N + G ++VTP V+EG V L++ QEVSSV S++N+ PTFN Sbjct: 597 TIGTSIYNQFTYQPTGVIMQVTPHVSEGGLVTLDVSQEVSSVSPTAASTANAASNPTFND 656 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 R++ + V+V+ G+TV L GL+ D S S +P L +IP++G L + R + L++ Sbjct: 657 RSVSSRVVVQDGQTVGLAGLITDSSSRINSGIPWLKNIPVLGVLAGNQNNNRQRTELLIL 716 Query: 589 IRPTIIRD 596 + P +I D Sbjct: 717 MTPHVIHD 724 >UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae RepID=A7JQ17_PASHA Length = 437 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 94/342 (27%), Positives = 164/342 (47%), Gaps = 28/342 (8%) Query: 268 TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITAD 327 T+ L YAKA+ ++E LT K S + +N I DE++NSL++ Sbjct: 122 TKTLKLHYAKASEVIESLT--------------KGSGTFLSENGYIHFDERSNSLIVKDS 167 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG-LPI 386 + + ++ +LD Q+ +EA IV + + LGV+W + GA + G L Sbjct: 168 AKSLKNIENLVKQLDQPTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGHYKFGGRLEG 227 Query: 387 FNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATP 446 + N IT A S+ N + L+AL N +I+A+P Sbjct: 228 NGLNNVTNNLNVNFPITGGASAVLQVSSINSRV-------LDLELSALEQENSVEIIASP 280 Query: 447 SIVTLDNKLASFNVGQDVP-VLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLL 505 ++T + K AS G ++P V+ +++ + D VE K L+V P ++ + +LL Sbjct: 281 RLLTTNKKPASIKQGTEIPYVMYNTKSEATD-----VEFKEAVLGLEVVPHLSTQNQILL 335 Query: 506 EIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGD 565 ++ +S +S S S+ T + + + V K GET+VLGG+ +++ KVP+LG Sbjct: 336 DLIVTQNSPNSQSGSSGLITIDKQELNTQVFAKHGETIVLGGIFQHLTQKGEDKVPILGS 395 Query: 566 IPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 IP + +LF T + +KR L++F+ P I++ ++ + K K Sbjct: 396 IPFIKRLFSQTRDKISKRELVIFVTPYILQSNEKSSNRKKSK 437 >UniRef50_Q39X07 Type II and III secretion system protein:NolW-like:Secretin/TonB, short-like n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39X07_GEOMG Length = 870 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 96/340 (28%), Positives = 154/340 (45%), Gaps = 43/340 (12%) Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTN 320 E+ E T V+ + YA ++V LK E+G I+ D +TN Sbjct: 567 EQGMELKTEVFDVNYAAVGDVVTQF----NTLKSERG--------------MISQDARTN 608 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 +++ V ++ ++ LDI QV++EA IVE LG+QW + A+ Sbjct: 609 RVIVKDIAPVVAEMRNLLKSLDIPEKQVMIEARIVEASSTVTQELGIQW---GIHARDAN 665 Query: 381 NTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF------NGDWGVLLTAL 434 G + NA D G +T P F G AAG G + L+AL Sbjct: 666 TIG--VTNA-----DVGFGGILTGLAPTAGTFGP--GAAAGITFGKLISGGSLDLKLSAL 716 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVT 494 AS + I+++P +VTL+NK A + GQ +P T S + E L+VT Sbjct: 717 ASGERIKIISSPKVVTLNNKAAKISQGQSIPY----STVSAEG--TKTEFVEAALTLEVT 770 Query: 495 PQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSK 554 P + ++ ++I+ +S + + P N + +LV+ GET V+GG+ D Sbjct: 771 PHIASDGSISMKIKATNNSAAPAPTGAV-PAINKKEATTELLVRNGETTVIGGIYVDNDS 829 Query: 555 EQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 + VP DIPL+G LF+ ++T++ K L++FI P I+ Sbjct: 830 QADQGVPFFKDIPLLGWLFKSSNTQKIKNELLIFITPKIV 869 >UniRef50_Q7UHD1 General secretion pathway protein D (OutD) n=1 Tax=Rhodopirellula baltica RepID=Q7UHD1_RHOBA Length = 822 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 99/336 (29%), Positives = 156/336 (46%), Gaps = 18/336 (5%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 ++ E N ++I +++ E + +LD+ RAQV + A+I +V LGV W Sbjct: 324 VSVYEAENRILIKGNRAQLELASQAFKQLDVPRAQVRITALIYDVSLEELEELGVNWGR- 382 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 G + T + + A V G + S ++ G+ D VLL Sbjct: 383 --GFRLDTTDESALADLAGNVEKAVTFGTLGSGG------ASSFGIRTLTDTFDTSVLLR 434 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLK 492 AL S+++ +LA PSI +D + AS + Q +P+++ S + VF VE K G LK Sbjct: 435 ALDSSDEAKLLADPSITAIDRREASIKIVQQIPIVAASPAEGSNVVFAQVEFKDAGIILK 494 Query: 493 VTPQVNEGDAVLLEIEQEVS-SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDD 551 VTP+++ + + L+++ E S V N+ P ++RT + V V G LGGL Sbjct: 495 VTPRISNDNTIELQVQPEYSVKVGEIENN---PVIDSRTAETTVRVANGHMFTLGGLRQK 551 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 E S VP L D+ VG+LFR STE + L+VF++P II D S++ Sbjct: 552 RIIEGTSGVPYLRDLKYVGKLFRSHSTEVRESELIVFLKPEIISPYDHGNERSRQAMCV- 610 Query: 612 RQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAP 647 +++D A V + D+N N H P P Sbjct: 611 ---ANRQLDEIPYASVCPQTPYCYDKNCPNHH-PRP 642 >UniRef50_B5YDZ7 Bacterial type II and III secretion system protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDZ7_DICT6 Length = 1256 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 91/305 (29%), Positives = 141/305 (46%), Gaps = 37/305 (12%) Query: 291 KLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 KLK + K SG +V D+ + L++ + ++IA+LD QV + Sbjct: 987 KLKYISLDTLKSVVSGIAKDVNFYYDQTSGLLLVQGPADQVSSVESMIAKLDKPTPQVKI 1046 Query: 351 EAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWD 410 + ++EV N ++G++W ++ +TGL I +AN W Sbjct: 1047 DVQVIEVSRENIKDIGIEWGTGSI------STGLQI-----------------TANVGW- 1082 Query: 411 MFSAYNGMAAGFFN-GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 + N G + AL S NK ILA PS+ T+ K +G VP++S Sbjct: 1083 -----QDLRISIINPGQISANIKALESQNKAKILAQPSMTTVSGKSTRIMIGDRVPLIS- 1136 Query: 470 SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTR 529 G+ + V+ VG L VTP VN + + +VS++ P +TR Sbjct: 1137 -YDAQGNRQVSFVD---VGIILNVTPTVNADGTITANLNPQVSTIQGYVQDV--PIISTR 1190 Query: 530 TIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFI 589 Q V +K GET+ LGGLL E +SKVPLLGDIP++G+LF+ ++ +R L++ I Sbjct: 1191 EAQTIVNLKNGETLALGGLLRQEEIESMSKVPLLGDIPILGELFKARKIQKVERELIILI 1250 Query: 590 RPTII 594 P II Sbjct: 1251 TPKII 1255 >UniRef50_B4D9V8 Type II and III secretion system protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9V8_9BACT Length = 621 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 100/373 (26%), Positives = 171/373 (45%), Gaps = 61/373 (16%) Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTN 320 E +E G+ Y YA+A V +L + VA D++TN Sbjct: 196 EPTESGS---YTFSYAQAEKAVPLL------------------QTQLQSGVAPQFDQRTN 234 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 ++ ++S +K+ + +D QV++EA +VEV + G+ W VG+ Sbjct: 235 TIFYRENRSNVDKVKAFLVSIDSPTQQVMIEARLVEVTANPKQSYGINWGG-TVGSSSTP 293 Query: 381 NT---GLPIFNAAQGV--ADYKKNGGITSA--NPAWDMFSAYNG-MAAGFF------NGD 426 T G P +Q V G +T N NG + G F G Sbjct: 294 QTFSYGAPTVPGSQSVNLQTNPTTGQVTPVIVNSQLPQLVTTNGKLTPGDFLMNGETRGG 353 Query: 427 WGVLLTA----------------LASNNKNDILATPSIVTLDNKLASFNV--GQDVPVLS 468 +G LL + L ++ + LA P +VT +N+ A+ + Q +P L+ Sbjct: 354 FGDLLASQFAILTVPSMSATLRLLNEDSDAEFLAHPRVVTANNQKATIKIVRNQPIPQLN 413 Query: 469 GSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG----- 523 ++ T+ VF+ + K G L VTP +N+ D + + ++ E+S+ + + T Sbjct: 414 FNEQTA-QAVFSGFQDKEFGNTLIVTPSINKDDFISMSVQPEISNKVADATFTFSGATVT 472 Query: 524 -PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 P + RT+ + V++K+G+T+ +GGLL D + +KVP++GDIP++G F+ R K Sbjct: 473 SPVIDKRTLDSNVVIKSGDTLAIGGLLQDEVTKGRTKVPVIGDIPILGYAFQERLNVRTK 532 Query: 583 RNLMVFIRPTIIR 595 RNL++F+ PTII+ Sbjct: 533 RNLLIFVTPTIIK 545 >UniRef50_P03667 Virion export protein n=4 Tax=root RepID=G4P_BPIKE Length = 437 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 28/280 (10%) Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 NSL+++ ++ LA I +D+ R QVL+++++ E NG++L Sbjct: 180 NSLLVSGSAAIMNALADFITSIDVARDQVLIQSLMFETSLVNGVDLS------------- 226 Query: 380 TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL-LTALASNN 438 F A D K GG ++ + +A G + G FNG+ L + A+ +++ Sbjct: 227 -------FAAGSASGD-KVAGGFNTSALGTALSTA--GGSFGIFNGNVLALSIQAVKNDS 276 Query: 439 KNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV---FNTVERKTVGTKLKVTP 495 + +++TP I+T + +VGQ+VP ++G T NV F T+ER+ VG LKVTP Sbjct: 277 NSKVISTPRILTQSGQTGYISVGQNVPFVTGKVTGEAANVNNPFQTIERRDVGVSLKVTP 336 Query: 496 QVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 V ++L I+ + S+ S ++ T N R +Q V +K G+T++LGGL+D + + Sbjct: 337 VVMGNGQLVLTIDTKADSLTSQMTASDIIT-NQRHMQTTVQIKDGQTLLLGGLIDSNTTD 395 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 VP +P++G LFR S +R + V + +I+ Sbjct: 396 GNRSVPWFESVPVIGWLFRSHSDSHNERTMFVLLTAHVIK 435 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 16/171 (9%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 N NNA +R FV+ Q K ++++P V+G I+V + D +Q FF S+L+ G+ + Sbjct: 34 NLNNAPVRSFVQWYSQKSNKAVVVNPDVKGNITVFNADV-NQANIDDFFKSVLNANGFVL 92 Query: 91 ITLDNGFLKVVR---------------SANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 + D + SA+ + S++P +L R L V Sbjct: 93 MAGDPSGVSTPSKLPSQQTDNDDDYEDSADYVPVGDSVPVSAQPQKPLDLTVRNFKLTRV 152 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 + D+ PL + +D+ G+V+ Y +N L+++G A+ +N L + I +DV Sbjct: 153 RSSDVLPLAKIFVDSNGGGDVIDYPGNNSLLVSGSAAIMNALADFITSIDV 203 >UniRef50_A3YI86 Type IV pili biogenesis protein PilQ n=1 Tax=Marinomonas sp. MED121 RepID=A3YI86_9GAMM Length = 390 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 29/285 (10%) Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 + ++ D +TNS +I+ D +L ++ LD Q+ + A I +VQ+ +GV+W Sbjct: 131 LVLSYDNRTNS-IISQDCHASPQLLEMVRWLDSPLRQIEISARIAQVQNAVESQIGVEWQ 189 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + G T +GL +A G++ A D A N Sbjct: 190 GQLAGDTLSTASGLV------DLATTSSTSGLSFAVAKSDDLLALN-------------- 229 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 L+ L SN +I++ P IVT + ++A G +VP QT+ D+ VE K G Sbjct: 230 LSFLESNGLANIVSEPKIVTAEGQMAKIESGTEVPY----QTS--DDEGTHVEFKQAGLT 283 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 L+V P V +GD V L ++ +V N P+ T I VLV ET+VLGG+ Sbjct: 284 LEVIPFVKQGDKVQLSLKIYQDAVGEMYNGV--PSIETNRINTQVLVGNQETLVLGGIYR 341 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 D E SKVP GD+P VG LFR+ + + K L+VFI P +++ Sbjct: 342 DEVWESTSKVPFFGDLPFVGALFRHQAQRQEKVELLVFITPKLLQ 386 >UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=Chromobacterium group RepID=Q7NZU2_CHRVO Length = 697 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 45/366 (12%) Query: 245 EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVL-----TGVSEKLKDEKGNA 299 ++ARQ++ +L E + + L+Y A + +VL +G E L E+G Sbjct: 357 QEARQQLATL---------EPLRSETFVLRYRSAEDFKKVLDGDNNSGKKESLLSERG-- 405 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 ++ D +TN+L++ + +K+ VI + DI QVL+EA IVE D Sbjct: 406 ------------SVLIDPKTNTLIVNDIGTAIDKIRDVITKTDIPVKQVLIEARIVEATD 453 Query: 360 GNGLNLGVQWANKNVGAQQFTNTGLPI-FNAAQGVADYKKNGGITSANPA---WDMFSAY 415 +LG++ + + +G P+ N + PA + + Y Sbjct: 454 NWERDLGIKLTYDRMDPKGII-SGNPLGTNVNNVTNLNNNQPYVIQTTPAGVNLPIATPY 512 Query: 416 NGMAAGFFNGD---WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT 472 ++A + G G+ L A+ + +K I+++P ++T D + AS G ++P S + Sbjct: 513 GTLSALYNVGHSVILGLELQAMQAEDKGRIISSPRVMTADRQEASIEQGTEIPYQEASSS 572 Query: 473 TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI--EQEVSSVDSSSNSTLGPTFNTRT 530 + +V K +L V PQ+ + V+++I ++ ++ + + N T P+ +T Sbjct: 573 GA-----TSVSFKKAVLRLNVKPQITPDNHVIMDITVNKDSANFEKTVNGT--PSLSTEK 625 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 I VLV+ G TVVLGG+ + ++KVP LGDIPL+G LFR + + L++FI Sbjct: 626 IITQVLVENGGTVVLGGIYQQQLNDVINKVPFLGDIPLLGALFRSSQKIDKRSELLIFIT 685 Query: 591 PTIIRD 596 P +I D Sbjct: 686 PKVIND 691 >UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVZ8_9DELT Length = 504 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 86/287 (29%), Positives = 140/287 (48%), Gaps = 27/287 (9%) Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 +I DE+TNSL+I A ++ E++ I LD R Q+L+EA IVE LGV+W+ Sbjct: 236 SIVVDEETNSLMIQATRNDMERVHKAINHLDRPRPQILMEANIVEATQRTARELGVRWSG 295 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLL 431 + V F + G D ++ + + + SA + + + L Sbjct: 296 RYVTPLSFED--------EVGFGDLLRDEAGYTGDMDLSVISARLPGSVLYAH------L 341 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKL 491 AL + + +IL +PSI T+DN++A GQ VP T ++ TVE + +L Sbjct: 342 QALERDGEVNILTSPSITTMDNQMAFTEHGQRVPY-----ETVDEDGSRTVEFEDAVLRL 396 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDD 551 +V P V EG+ + ++I VD + + P T+ + ++V+ GET+V+ GL Sbjct: 397 EVVPSVMEGNHLKMDIRVNKDEVDFTRDVRGQPVIRTKHTETNLVVRDGETIVISGL--- 453 Query: 552 FSKEQVSK----VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 SKE +S V L D+P +G LF+ E+ ++FI PTI+ Sbjct: 454 -SKETLSDTERGVMGLRDLPGLGWLFKSREQEQEMEEFLIFITPTIL 499 >UniRef50_A8FXQ1 Type II secretory pathway component PulD-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FXQ1_SHESH Length = 696 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 100/364 (27%), Positives = 167/364 (45%), Gaps = 61/364 (16%) Query: 260 VEESEEGNTRVYYL---KYAKATNLVE----VLTGVSEKLKDEKGNARKPSSSGAMDN-- 310 +++ +G R Y++ K+A+A++L + +++G S +K +++ S +DN Sbjct: 344 IDKPSKGTERQYHIYTPKFARASDLGDSISPLISGESYSGNSKKTSSKDNKDSSVVDNNS 403 Query: 311 ----------VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 + + D ++NSL+ A + + + ++ R+DI QVL+ I EV+ Sbjct: 404 SMSTLTSNDKMTLVVDARSNSLIFHASGTEYQSILPLVQRMDILPKQVLLSVTIAEVKLT 463 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 G ++A + T GL + G +K S N + Sbjct: 464 GEFKRGFEFALSSGNFSGSTKGGLGLDEIVGGTFSWK---------------SGANEIIG 508 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVF- 479 F + N++ +IL+ PS++ D A+ NVG +PV SGS ++ V Sbjct: 509 KF-----------VEENSQVNILSKPSLLVRDGTEANINVGDKIPVSSGSSSSGSGEVVT 557 Query: 480 -NTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGP-------TFNTRTI 531 N R+T G KL VTP VN V++EI QE+S N +GP TF R+I Sbjct: 558 ENITYRET-GIKLTVTPTVNAQGVVIMEINQEIS------NQVVGPVGKGGNPTFFDRSI 610 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 + V+ TG+T++LGGL+ D + VP L IPL+G LF S K L++ + P Sbjct: 611 KTEVVADTGQTILLGGLISDDTTNSNKGVPYLKSIPLIGALFESDSKNNTKTELVIMVTP 670 Query: 592 TIIR 595 I+ Sbjct: 671 KIVE 674 >UniRef50_A1HPR1 Type II and III secretion system protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPR1_9FIRM Length = 408 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 90/296 (30%), Positives = 143/296 (48%), Gaps = 43/296 (14%) Query: 332 EKLATV-----IARLDI-RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLP 385 EKLA V ++ L++ R QV +EA ++E+ LG++W N F G Sbjct: 137 EKLAAVYGDKVVSLLEVLRPVQVKIEAKVIEINRQKIKELGIKWGNSADTPGTFI-FGQS 195 Query: 386 IFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILAT 445 N+ G D+F G A D L+AL + +L+ Sbjct: 196 ALNSKVG-----------------DVFGDLGGYA------DINAQLSALVKSGAAKVLSQ 232 Query: 446 PSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLL 505 P++VTL AS +G +PV + DN T+E K G KL + P+VN + Sbjct: 233 PNVVTLSGDKASIMIGGQIPV-----PVAQDNNKITIEWKDYGIKLDIAPEVNGDGLIQS 287 Query: 506 EIEQEVSSVD-SSSNST-LG-----PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS 558 ++ EVSS+D +S+NS LG P R + A+ + +G+T+ +GGL+ + + V Sbjct: 288 RVKAEVSSLDYNSANSIKLGAGMEIPPVRLRKAETAIALSSGQTMAIGGLIATETSKDVV 347 Query: 559 KVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQE 614 KVP+LGD+P++G LFR TS R + L+V I P+++ + + S+E + QE Sbjct: 348 KVPMLGDLPVLGHLFRSTSFRRGETELLVLITPSLVNPGEYLPATSRE-MKEFAQE 402 >UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legionella longbeachae D-4968 RepID=D1RGV5_LEGLO Length = 701 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 100/352 (28%), Positives = 163/352 (46%), Gaps = 47/352 (13%) Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 ++ E + + + YAKAT+L ++ L +KG ++ D +T Sbjct: 360 IQRLEPVRSELIQINYAKATDLAILIKDRQNSLLSDKGK--------------VSVDTRT 405 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 N++ I S +++ +I LD+ QVL+EA IVEV +LG++W Q Sbjct: 406 NTIWIQDSGSRVDEVRKLIKELDVPVKQVLIEARIVEVTKDFAQDLGIRWGVSK--PQHL 463 Query: 380 TNTGLPIFNAAQGVADYKKN------------GGITSANPAWDMFSAYNGMAAGFFNGDW 427 + T AQGVA +T ANPA G+A GD Sbjct: 464 SGTLAGANQLAQGVAPADVTPFTDRLNLDLVAAPLTKANPA------TVGIALAQL-GDN 516 Query: 428 GVL---LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVER 484 +L L+AL S +++++P ++T + + A + GQ++P T+SG V Sbjct: 517 ILLDLELSALESEGLAELISSPRLITANQQPALIDSGQEIPY--QQSTSSGAT---AVAF 571 Query: 485 KTVGTKLKVTPQVNEGDAVL--LEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGET 542 K LKV PQ+ + +L L+I Q+++ + + N P T+ IQ VLV G+T Sbjct: 572 KKAVLSLKVIPQITPDNKILMDLKINQDLALPNQTYNGV--PAIATKEIQTNVLVSNGQT 629 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 +VLGG+ + +++VP G +P+VG LF+ T L++FI P II Sbjct: 630 IVLGGIYQQDKSKTITRVPFFGQLPVVGNLFKNTQIGVHNDELLIFITPKII 681 >UniRef50_C9RKD2 Type II and III secretion system protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD2_FIBSS Length = 487 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 157/333 (47%), Gaps = 39/333 (11%) Query: 271 YYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSV 330 + + +AKA LV+VL E +K +G I+ E+TNS+++ +S Sbjct: 134 FQVHHAKADELVKVL----ESMKSNRGK--------------ISVVERTNSIIVYDTESK 175 Query: 331 QEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAA 390 E++ + LD+ Q+++ A +V V LGV W +G+ T A Sbjct: 176 IEQMGNALVELDVETLQIMITAKLVVVNSELARELGVDWTAA-LGSSTLTPGTAAAATGA 234 Query: 391 -------QGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 GV NG +PA + A + A + + + ++ L + ++L Sbjct: 235 TAGSSRISGVIQSFPNG----TSPA--VGKANTAITASLLDNNLQIAISNLMGDASTEVL 288 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAV 503 A+P + TLDN A +G V + SG++ VE G KL VTP V+ + + Sbjct: 289 ASPQVSTLDNTEAQVFMGDKVSIRVIDD--SGESSTKMVE---TGIKLTVTPHVSGDNRI 343 Query: 504 LLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 LL++ E +S + +T+ + V+V GETVV+GGL + + E S +P L Sbjct: 344 LLDLHPENNSYGYDEKGEV--VISTQEAKTKVVVADGETVVIGGLTRNENTESESGIPFL 401 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 DIPL+G LF+Y+ K++L++F+ P IIR+ Sbjct: 402 KDIPLLGNLFKYSRKSITKKDLVIFVTPRIIRN 434 >UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9K2_BURGB Length = 649 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 105/401 (26%), Positives = 181/401 (45%), Gaps = 55/401 (13%) Query: 224 ALLSAKIVADKRTNSLIISGP-----EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKA 278 ALL A +A R +I P + R R + ++ +E +R + L+Y +A Sbjct: 253 ALLDANGLAMARRGGVIWVAPVAELAARERARFETHARTAALEPLA---SRAFVLRYPRA 309 Query: 279 TNLVEVLTG--VSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLAT 336 ++ +LTG +++ +G+ + AD +TN L +T ++A Sbjct: 310 KDVARLLTGGAAGQRVLSRRGS--------------VLADPRTNLLFVTDLDGRLAQIAA 355 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ-------WANKNVGAQQFTNTGLPIFNA 389 ++A+LD QVL+EA IVE + G LG + W GA + G Sbjct: 356 LLAQLDRPSRQVLIEARIVEGERGFSRELGARLALRSSAWGGSRAGAGAGGSGGSDGGAG 415 Query: 390 AQGVADYKKNGGIT-------------SANPAWDMFSAYNGMAAGFFNGDWGVL---LTA 433 + D G T SA P +A G+ F G +L L+A Sbjct: 416 GAAMPDSNPGGAATGIVGGPGGRLLDLSARPLAGFEAATAGLTL-FVAGASRLLDLELSA 474 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 L + + I+++P IVT D A G ++P Q G V R+ KL+V Sbjct: 475 LEAQGRGRIVSSPRIVTADRAPALIEQGTELPY----QAKVGLGVSGVQFRRAT-LKLEV 529 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 PQ+ V+L+++ SV S+++ GP +T+ ++ V ++ G TV +GG+ + Sbjct: 530 EPQITPEGHVVLDLDVAKDSVGESTDA--GPAIHTKHVRTRVEIENGGTVSIGGIYESDR 587 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 ++ V++VP+LG IP++G LFR+ + + L+V+I P ++ Sbjct: 588 RDDVTRVPVLGKIPMLGALFRHRARRQRTAELVVYITPRVV 628 >UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FD61_DESAA Length = 566 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 101/349 (28%), Positives = 161/349 (46%), Gaps = 28/349 (8%) Query: 269 RVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR-KPSSSGAMDNVAITADEQTNSLVITAD 327 +V + YA LVE L + E ++ K SG++ ++ D+ NSLV+ A Sbjct: 199 KVVQIDYADPEGLVEPLNSILATSAGENAASKSKNDKSGSVVRGSVDVDKHNNSLVLMAV 258 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG---- 383 + EK+ +I +LD QV ++A IVE +LGVQW N Sbjct: 259 REDLEKMLALINKLDRPPYQVHIKANIVETTRDTARDLGVQWGWMYGRYDSLGNDTDFWL 318 Query: 384 LPIFNAAQGVA-DYKKNGGITSANPAWDMFSAYNGM------------AAGFFNGDWG-- 428 P N+ + D GG T+ + + NG+ G G G Sbjct: 319 TPGGNSGSAASRDAPLTGGYTAGTGSKGVSGQGNGINFPVDFEDAMGATMGLMFGKVGSN 378 Query: 429 ---VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 V L+ALA K +IL+TPSI TLDN+ AS G +VP ++ ++ GD V+ K Sbjct: 379 ILEVQLSALADAGKINILSTPSITTLDNQTASTENGTEVPYVTINE--DGDR---EVKFK 433 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 L++TP V + + +++ + VD S N P + + +++V+ GETVV+ Sbjct: 434 DATLMLEITPHVIDEGQMKMKVSIKKDEVDLSRNVDGNPFILKKRTETSLIVRNGETVVI 493 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 GL + E + +P L DIP +G LF+ S A +++F+ PT++ Sbjct: 494 SGLSKTRNTEGDTGIPWLKDIPGLGYLFKSESKSEAMEEVLIFLTPTVL 542 >UniRef50_Q6MPI6 Fimbrial assembly protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPI6_BDEBA Length = 726 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 49/338 (14%) Query: 269 RVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQ 328 R++ + YAK L +K+KD G D + D +TN+LV+T + Sbjct: 411 RMFPVSYAKVDEL-------EKKIKDFLG-----------DRGRVVGDVRTNALVVTDIE 452 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFN 388 E+ A +IA LD + AQV +E IVE ++ N+GV W + TG PI Sbjct: 453 ENLERAARLIASLDTQPAQVSIEGKIVEAKESFTRNIGVNW----------SATGAPIKL 502 Query: 389 AAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF-FNGD------WGVLLTALASNNKND 441 + G + NP++++ + G + FN + +G L ALA N + Sbjct: 503 GSTA-------RGPVNMNPSFNVNQSAAGSSGALNFNLNVGTLDIFGTLSAALALNESEE 555 Query: 442 ---ILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVN 498 I++ P I+TL N+ A N +VPV +Q +G T + K + KL+VTPQV Sbjct: 556 QVKIISAPRIMTLSNEKADINQTTEVPVRQVTQ--NGTATQETFQFKPLTLKLEVTPQVT 613 Query: 499 EGDAVLLEI--EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQ 556 +V++++ ++ D SS N+R VLVK G+T V+GG+ + + Sbjct: 614 ADGSVIMKVLVNRQFRGADVSSAGQGAFAVNSREANTRVLVKNGQTAVIGGIYQSDATDG 673 Query: 557 VSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 VP ++P V LF+ + + K L++F+ P I+ Sbjct: 674 EVGVPWFRELPFVSYLFKTKNISKEKSELLIFLTPRIM 711 >UniRef50_D2RKE8 Type II and III secretion system protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKE8_ACIFE Length = 590 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 41/279 (14%) Query: 335 ATVIARLDIRR-AQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNT-------GLP- 385 + +I LD+ QV + A I+E+ +LG+Q+ + +G N+ G P Sbjct: 171 SNIIDMLDMTEPTQVRLVAQIIEINTSAEKDLGIQYWSPTLGDNTTGNSNSTDITRGTPG 230 Query: 386 IFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL---LTALASNNKNDI 442 +F A + YK+ G G+F L L AL ++ K I Sbjct: 231 LFYAGENF--YKQRGSF------------------GWFGSHLSNLNASLQALVTSGKARI 270 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDA 502 L+ PSI T+ + A +G +P+ T++GD ++ + G KL + P V+ + Sbjct: 271 LSRPSITTMSGQKAKILIGGRIPI----PTSAGDGQI-AIDWRDYGVKLDIEPVVDADNK 325 Query: 503 VLLEIEQEVSSVDSS----SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS 558 + ++ EVS++D N P +R + + V++G T+ +GGLL+ + VS Sbjct: 326 ITSKVHAEVSTLDYGHSVKENDFSIPAIASREAEAMINVRSGMTMAIGGLLNSEDSKSVS 385 Query: 559 KVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 K+PLLGDIP++GQ FR+TST R R L++ I P ++ DD Sbjct: 386 KIPLLGDIPIIGQFFRHTSTTRDNRELLILITPLLVGDD 424 >UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lovleyi SZ RepID=B3E9T4_GEOLS Length = 891 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 30/291 (10%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 IT D++TN +++ +S + + ++A LD+ QV++EA IVE +LGV W Sbjct: 618 ITQDQRTNKVIVKDVKSAVDDMRKILASLDVPEKQVMIEARIVEASSTFTQSLGVNWG-- 675 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKN-GGITSANPAWDMFSAYNGMAAGFFNGDWG--- 428 + + I G+ N GG+ S P S G AAG G Sbjct: 676 ----IHYRDGSASI----AGINSMDTNFGGLASTAPTSSGVSGSPGAAAGISFGTLSSNI 727 Query: 429 ---VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 + L A S I++TP + TL++K A GQ +P + + + +E K Sbjct: 728 KLDLRLNAAVSAGLVRIVSTPRVATLNHKSAKITQGQQIPYTASTS--------DKIETK 779 Query: 486 TV--GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETV 543 V L+VTP +N V+++I+ + S S+ N P N + ++++ GET Sbjct: 780 FVEAALALEVTPHINPNGTVVMKIDAKNDSPGSTGNP---PAINKKQATTEMMLRDGETT 836 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 V+GG+ + VP L D+P +G LF+ T+R + L++FI P II Sbjct: 837 VIGGIFVESESNNDDGVPFLADVPWLGGLFKSNETKRNRNELLIFITPRII 887 >UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TDF1_RICCO Length = 536 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 97/383 (25%), Positives = 176/383 (45%), Gaps = 44/383 (11%) Query: 233 DKRTNSLIISGPEK-ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEK 291 D N+L+ + E+ A +R + ++E++ T+ + +KY KA ++ +++ + Sbjct: 174 DNLGNTLVFAPKEEIAARRKQDQEQENQIDETKPLVTQSFQIKYQKAADIKTLISDPKQP 233 Query: 292 LKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 L ++G A D TN++ + + K+ ++ ++DI QVL+E Sbjct: 234 LLSKRGTA--------------VVDPSTNTMFVKDIDTSMTKIQEILNKIDIPSRQVLIE 279 Query: 352 AIIVEVQDGNGLNLGVQWA--NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW 409 + IV+ D G +LG ++ N + N G + + + Y + P Sbjct: 280 SRIVQANDTFGKSLGARFGVVKNNALTAKGLNPGNDVLTSGSLSSTYATGQAKQTTTPD- 338 Query: 410 DM-----FSAYNG-----------MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDN 453 D+ SA G + AGF + L+A S++K +++P ++T + Sbjct: 339 DLNVNLPASATAGTVSSAALTLLRLPAGFL---LNMELSAAESDSKIKTISSPRVITANQ 395 Query: 454 KLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS 513 + A+F+ G ++P Q TS + ++ T+G + VTPQ+ D + L+IE Sbjct: 396 QTATFDAGTEIPY---QQATSSGATSVSFKKATLG--VNVTPQITPDDKINLDIEVTKDD 450 Query: 514 VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLF 573 V N P+ +T ++ VLV GET VLGG L + + +VP IP+VG LF Sbjct: 451 VGQIFNGV--PSIDTNKVKTKVLVDNGETAVLGGFLIESKNDSNQRVPFFSSIPVVGNLF 508 Query: 574 RYTSTERAKRNLMVFIRPTIIRD 596 + T +K+ L+ FI P I+ D Sbjct: 509 KSTLNTHSKKELLFFITPKIMSD 531 >UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW26_DICNV Length = 734 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 103/349 (29%), Positives = 169/349 (48%), Gaps = 49/349 (14%) Query: 273 LKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV-----AITADEQTNSLVITAD 327 +KYAKA++L +L EK ++ + K A D V ++T DE+ N+L+++ Sbjct: 392 IKYAKASDLQRIL----EKSREISSDGTKNGILAAQDAVLSARGSVTIDERMNALIVSDI 447 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW---------ANKNVGAQQ 378 + + + ++ARLD QVLV+A +V +D +LG ++ +N VG+ Sbjct: 448 PAKIQAVRDLVARLDESVRQVLVDARLVITKDNFARDLGARFGLSFKGTAGSNPIVGSGN 507 Query: 379 FTNT----------GLPIFNAAQGVADYKKNGGITSAN---PAWDMFSAYNGMAAGFFNG 425 T T +PI N GV N GI S N P++ G++ + Sbjct: 508 LTGTTFYAGMLEEKTIPIDNRL-GV-----NLGIASPNVRAPSY-------GISILGSDV 554 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 + L AL + +++++++P +VT D A GQ++P +T D + K Sbjct: 555 LVDLELQALQNEGRSEVISSPRVVTQDGNQAKVMSGQEIPY-----STLDDKGSVQTDYK 609 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 L+VTP+V D V +EIE + V+ S P + + V V GET+VL Sbjct: 610 EALLSLEVTPRVTPNDRVNMEIEIKKDRVNWSEQVLGQPAIDKNLLNTKVEVANGETIVL 669 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 GG+ + +KVPLLGDIP+VG +F+ T+ + K L++FI P +I Sbjct: 670 GGIYEQEQSLSENKVPLLGDIPVVGNVFKNTNKKFTKNELLIFITPRVI 718 >UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein pilQ n=31 Tax=Bacteria RepID=PILQ_NEIG1 Length = 723 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 86/290 (29%), Positives = 151/290 (52%), Gaps = 16/290 (5%) Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 ++ D TN+L++T +SV EK +I LD+ QV++EA IVE DG +LGV++ Sbjct: 434 SVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQVMIEARIVEAADGFSRDLGVKFGA 493 Query: 372 KNVGAQQFTN-TGLPIFNAAQGVADYKKNGGITSAN----PAWDMFSAYNGMAAGFFNGD 426 G ++ N T + G K T N A + S +++G N Sbjct: 494 --TGRKKLKNETSAFGWGVNSGFGGGDKWEAQTKINLPVAAAANSISLVRAISSGALN-- 549 Query: 427 WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKT 486 + L+A S +K LA P ++T + K A G ++P + + + G N NT +K Sbjct: 550 --LELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIP-FTVTTASGGGNSTNTELKKA 606 Query: 487 VGTKLKVTPQVNEGDAVLL--EIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVV 544 V L VTP + +++ +I ++ + +S N+T+ +T+++ +V+ G T++ Sbjct: 607 V-LGLTVTPNITPDGQIIMTVKINKDSPAQCASGNNTI-LCISTKSLNTQAMVENGGTLI 664 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 +GG+ ++ + ++KVPLLGDIP++G LF+ + +R L++FI P II Sbjct: 665 VGGIYEENNGNTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFITPRII 714 >UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fastidiosa RepID=B2I8B2_XYLF2 Length = 636 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 85/293 (29%), Positives = 146/293 (49%), Gaps = 15/293 (5%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 + ADE+TN+L+I+ ++ T+I +D QVL+E IV D +LG ++ Sbjct: 340 LVADERTNTLMISDIPKKVAQMRTLIQHIDRPVDQVLIEGRIVIATDSFARDLGAKFG-- 397 Query: 373 NVGA-QQFT-NTGLPIFNAAQGVADYKKNG-GITSANPAWDMFSAYNGMAAGF----FNG 425 VGA +F+ NT N G + G + P S +A FN Sbjct: 398 -VGAASRFSDNTATIGSNVTAGSSTSATRGLNVDLGGPTNTTASVLPSLAYTLLGPKFNL 456 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 D + L+AL ++ ++++ P IVT + + G+++ ++ + +G V+ K Sbjct: 457 D--LELSALQQESRGEVISNPRIVTANQREGYIKQGKEIGYVTITGGVAGGQATPNVQFK 514 Query: 486 TVGTKLKVTPQVNEGDAVLLEI---EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGET 542 +L+VTP + + V L + + E+ + + +N PT N R I AVLV G+T Sbjct: 515 EAVLELRVTPTITNDNRVFLNMTVKKDEIDQMITIANFGTVPTLNKREINTAVLVDDGQT 574 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 VV+GG+ + + VSKVP LGD+P +G LF+ ++ K L++F+ P ++R Sbjct: 575 VVIGGVYEFSDRNSVSKVPFLGDVPFLGNLFKKRGKDKQKAELLIFVTPKVLR 627 >UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A4Y8_ALHEH Length = 694 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 39/330 (11%) Query: 273 LKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQE 332 + YA+A ++ +L G L E+G VAI DE+TN L++ + + Sbjct: 385 VNYARAEDIANLLKGDETSLLSERGQ------------VAI--DERTNLLIVQDMERNID 430 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG 392 + ++ RLDI QVL+E+ IV D +LGV++ G+ T + Sbjct: 431 DIRNLVNRLDIPVQQVLIESRIVIADDDFSRDLGVRFGYTATGSLGSEGTAIGARPTPTP 490 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD--WGVLLTALASNNKNDILATPSIVT 450 D + + PA + G+A G GD + L+A+ + + +++++P ++T Sbjct: 491 GIDGTDDLMVDLPAPAE---APRLGLAIGRI-GDRLLQLELSAMETEGRGEVISSPRVIT 546 Query: 451 LDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE 510 + + A+ G ++P +T SG VE K L VTPQ+ D V++ +E Sbjct: 547 ANQREANIRQGVEIPY--QEETASG---ATNVEFKEAVLGLTVTPQITPDDRVIMNLE-- 599 Query: 511 VSSVDSSSNSTLG------PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLG 564 SN T+G P+ +T+++ VLV GETVVLGG+ + S EQ +VP G Sbjct: 600 ------VSNDTVGEVFAGVPSIDTQSVTTQVLVDNGETVVLGGVYERASGEQTRRVPFFG 653 Query: 565 DIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 +P VG LFR T + L+VF+ P I+ Sbjct: 654 SLPGVGWLFRNRLTFDEQSELLVFVTPRIL 683 >UniRef50_Q07N78 General secretion pathway protein D n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07N78_RHOP5 Length = 789 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 124/500 (24%), Positives = 215/500 (43%), Gaps = 50/500 (10%) Query: 129 IVPLENVPARDLAPLLRQMMDAGSVG---NVVHYEP----SNVLILTGRASTINKLIEVI 181 I+P+E+ + L +++ G G NVV +P + VL ++ R I+ + + + Sbjct: 310 ILPIEHAAPETVIAELNKILGTGEGGLSQNVVVLQPISRLNAVLAVSSRRDAIDHVTKWV 369 Query: 182 KRVDVIGTEKQ--QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 R+D ++ L+YA A+ +A LN++ G + A + + N+ Sbjct: 370 LRLDAADDNAAGVKVYRLKYAQAKTVAATLNRMFGVRTGGTGQ---ADADQLEPGQDNTD 426 Query: 240 IISGPEKAR-QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 +G + A Q T+ + S G +TNLV+ G + Sbjct: 427 GTNGEKVATAQPATTSGSTAPTPASNAGGV--------SSTNLVKTSFGADSSAGQKPTG 478 Query: 299 ARKPSS----SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 A +S SG V +T D N L + + I +D QV +E I Sbjct: 479 ADDATSTDSRSGRSGKVRVTPDVTNNVLFVETTPQTYAVVERAIREMDRFPTQVNIEVTI 538 Query: 355 VEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 E+ + L GVQ+ F +G ++ G S P + Sbjct: 539 AEITLTSELQYGVQF---------FLKSG-----------NFSAGLGGASGIPLRTSYPG 578 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 N ++ D V+L ALA +L++PS+V LD + A VG +P+L+ Q TS Sbjct: 579 LNLVSGALL--DPQVVLDALAQFTSVKVLSSPSLVVLDRQPAVLQVGDQIPILT-RQLTS 635 Query: 475 GDNV--FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQ 532 ++ + V+ K G L V P+VN V L +EQ++S+V S+ TL PT + R ++ Sbjct: 636 AESTATVSNVDLKDTGIILNVLPRVNANGLVTLNVEQQISNVVSTQPDTLTPTISQRRVK 695 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 + + V +G+TV+L GL+ D + +P++ I ++ L ++ L++FIRP Sbjct: 696 SVISVSSGQTVLLAGLITDGQNINRNGLPVVSQIKVLSDLLSSHDRTASRTELIIFIRPK 755 Query: 593 IIRDDDVYRSLSKEKYTRYR 612 II + +++E R R Sbjct: 756 IIASGQDAQHVTEEFLGRMR 775 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 16/267 (5%) Query: 24 ENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 + Y NF D+ + I+G L LID V G I++ S+ + + Sbjct: 144 DGRSYQLNFEATDVAAVGKAILGDILNANYLIDSRVSGQINLTSSQAVPRSSLIPLLETA 203 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L L + ++ D ++ A ++ + ++ G G T ++P VPA +LA Sbjct: 204 L-LSINATLSRDGTIYRISPVAEPRSLGNIGFQAATDGYG----TTVIPARYVPAANLAK 258 Query: 143 LLRQMMDAGSVGNVVHYEP-SNVLILTGRASTINKLIEVIKRVDV--IGTEKQQIIHLEY 199 +L + G V EP SN+L++ G A+ L+ VDV + T+ I+ +E+ Sbjct: 259 ILDGL---GGRSGTVKVEPTSNLLMIQGTAAERRALLGAAAMVDVDWMRTKSVAILPIEH 315 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS-LIISGPEKARQRITSLLKSL 258 A+ E + LN+++ G ++ I R N+ L +S A +T + L Sbjct: 316 AAPETVIAELNKILGTGEGGLSQNVVVLQPI---SRLNAVLAVSSRRDAIDHVTKWVLRL 372 Query: 259 DVEESEEGNTRVYYLKYAKATNLVEVL 285 D + +VY LKYA+A + L Sbjct: 373 DAADDNAAGVKVYRLKYAQAKTVAATL 399 >UniRef50_B6A2I8 Type II and III secretion system protein n=3 Tax=Rhizobium RepID=B6A2I8_RHILW Length = 495 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 15/271 (5%) Query: 347 QVLVEAIIVEVQDGNGLNLGVQWA---NKNVGAQQFTNTGLPIFNAAQGVADY-KKNGGI 402 QV++E ++E G +LG+ W+ N +G + T+ GL + + V G Sbjct: 184 QVMLEVRVIEASRQTGRDLGIGWSGRGNNGIG-KATTSQGLGVDDNGSLVRTLVDPKGAA 242 Query: 403 TSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 T A P + + ++ G + V++ AL LA P+++ + ASF+ G Sbjct: 243 TGALPFGQLIAKVLEISGGHID----VVINALEQKGLVRRLAQPNLIAMSGSTASFHAGG 298 Query: 463 DVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL 522 +VP+L T +G V + + G +L P V + + LEIE EVS +D S N Sbjct: 299 EVPILK--TTNNGTTVATETDYRPFGVRLTFKPVVLDDGLINLEIEPEVSELDPSINVNG 356 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 P F +R V ++ G++ L GLL + + + ++P LG IP++G LFR TS ++ + Sbjct: 357 NPGFISRAASTTVALRDGQSFALAGLLQSINAKDIQQLPGLGKIPILGALFRSTSFQKKE 416 Query: 583 RNLMVFIRPTIIR----DDDVYRSLSKEKYT 609 +L++ + P I+R +D+Y L + + + Sbjct: 417 SDLVIVVTPHIVRPARPGEDLYSPLDQTRSS 447 >UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=cellular organisms RepID=Q3A2N4_PELCD Length = 874 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 88/293 (30%), Positives = 136/293 (46%), Gaps = 23/293 (7%) Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 D + D + L++T SV + ++ LD QVL+EA IVE +LGV Sbjct: 597 DRGKVIGDVRDKKLIVTDIPSVVADIKQLVRLLDTPVRQVLIEARIVEASATFSRDLGVN 656 Query: 369 WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWG 428 W + Q + + +A+ G+ GG P +G+ +G G G Sbjct: 657 WG---ISYQHNPGSDVEGNDASIGM------GGTLVGIPV-SPGEVSSGIVSGLTFGQVG 706 Query: 429 V-------LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT 481 V L AL + I++TP + TL+ + A G ++P LS S + Sbjct: 707 VDKTVLDLRLAALEQSGHGRIVSTPRVSTLNGEEAEVAQGTEIPYLSVSDDGT------K 760 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGE 541 E K LKVTP++N +V+LEIE + S +++ + P +T+ VLVK GE Sbjct: 761 TEFKKAELSLKVTPEINPDGSVILEIEAKNDSRGANTGLSEAPAIDTKRATTKVLVKDGE 820 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 T V+GG+ E S VP L ++P++G LF+ S +R L+VFI P I+ Sbjct: 821 TTVIGGIFIQDKSESDSGVPWLMNVPILGHLFKSKSVSEERRELLVFITPRIL 873 >UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHB7_9DELT Length = 1125 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 41/310 (13%) Query: 313 ITADEQTNSLVITADQSVQEKLA---TVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW 369 +T D +TN+L++ V E +A +++ +LD + QVL+EA IVE + LG+QW Sbjct: 821 VTPDTRTNTLIV---MDVAENIALAESLVRQLDSQTPQVLIEARIVEARTNWLRQLGIQW 877 Query: 370 ANKNVGAQQFTN-TGLPIFNAAQGVADYKKN----------GGITSANPAWDMFSAY--- 415 V + N TGL NA N G + N A D+ + Sbjct: 878 GFDFVASPGTGNPTGLLFPNAIGIGGGSGSNQSPVNGLILPGAAANPNYAVDLPAVVGTG 937 Query: 416 NGMAAGF----FNGDWGVLLTALASNNKND--ILATPSIVTLDNKLASFNVGQDVPVLSG 469 +G A GF +G+ L A+ N+ D I++ P IVTLDN A G +P+ Sbjct: 938 SGGALGFSFGSLSGNLNTNLRLSAAENEGDVRIISAPKIVTLDNTEAQIEQGVQIPIAQ- 996 Query: 470 SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNT 528 S V T+G L+VTPQV AVLLE+E + + D + G PT T Sbjct: 997 ---VSAQGVNTRYVNATLG--LRVTPQVTNEGAVLLEVEVQKNEADFVNTGARGDPTILT 1051 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQV---SKVPLLGDIPLVGQLFRYTSTERAKRN- 584 ++ ++ +L+ G+T V+GG+ +++ Q SKVP DIP++G F+ TER R+ Sbjct: 1052 KSARSQLLITDGDTAVIGGI---YTRNQAINHSKVPWFADIPIIGWFFK-NRTERDDRSE 1107 Query: 585 LMVFIRPTII 594 +++F+ P I+ Sbjct: 1108 MLIFLTPRIV 1117 >UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLX9_9GAMM Length = 702 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 102/378 (26%), Positives = 182/378 (48%), Gaps = 45/378 (11%) Query: 233 DKRT--NSLIISGP----EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT 286 D+RT N L+I+ E+ RQ + S S VE+ T + Y KA+ E+++ Sbjct: 351 DQRTVGNVLLIAPAAEIAERERQELES---SKQVEQLAPLRTEFIQVDYRKAS---EMMS 404 Query: 287 GVSE-KLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRR 345 + E K+ E+G + AD++TN L++ + + ++ + D+ Sbjct: 405 TIQEAKMVSERG--------------FVMADDETNVLMVRETATALRDIRNILKKFDVEV 450 Query: 346 AQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSA 405 QVLVEA +V +LGV+W G N I + + G ++ ++ Sbjct: 451 EQVLVEARLVNATSNVTKDLGVKWG---FGYNDVDNGKGWIVDNSIGNVNFGNTTAGNTS 507 Query: 406 NPAWDMFSAYNG---MAAGFFNGDWGVLLTALA---SNNKNDILATPSIVTLDNKLASFN 459 N D+ ++ +A GF G +L L+ ++ K +I++ P ++T + K A Sbjct: 508 NLMVDLGASVTSPGTIAIGFKPGASSLLALELSALETDGKAEIVSQPKVLTTNGKQAKIE 567 Query: 460 VGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS-S 518 G ++P QT V ++E K V L VTP++N GD + +++ S+ Sbjct: 568 SGSEIPY----QTVEDGEV--SIEFKDVVLSLDVTPRINPGDRIAMDLLITQDSIGQVLP 621 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 N + + + +Q V+V G+T+VLGG+ + + E ++KVPLLGD+P++G LFR Sbjct: 622 NGEI--SIDNNELQTTVVVPDGQTIVLGGVFKNETSETINKVPLLGDLPIMGPLFRNKEN 679 Query: 579 ERAKRNLMVFIRPTIIRD 596 + K L++FI P ++R+ Sbjct: 680 QAEKTELLIFITPKLVRN 697 >UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 Tax=Acinetobacter RepID=B2I0J4_ACIBC Length = 721 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 27/303 (8%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA-- 370 IT D++TN+L+I +++ +I LD++ QV+VEA IV LGV+W Sbjct: 421 ITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGIL 480 Query: 371 ------NKN--VGAQQFTNTGLPIFNAAQGVADYKK--------NGGITSANPAWDMFSA 414 N N VG + T L + YK N + +NPA + A Sbjct: 481 SQGITNNNNLLVGGSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVSNPAGSI--A 538 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 + ++ F D + L+AL ++ ++++TP ++T D + A GQ VP S + + + Sbjct: 539 FGLISMSDFMLD--LELSALQADGYGEVISTPKVMTADKQTAKVATGQQVPYQSTTNSAA 596 Query: 475 GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSSNSTLGPTFNTRTIQN 533 G T K L VTP + + ++++ SV ++ N L N I Sbjct: 597 GSTA--TTSFKDALLSLNVTPSITPDGKIQMKLDISKDSVAGAAPNGEL--ILNKNNINT 652 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 VLV GETV+LGG+ + + +KVP GDIP+VG+LFR K+ L++F+ P I Sbjct: 653 NVLVDNGETVILGGVFEQTTMNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRI 712 Query: 594 IRD 596 + D Sbjct: 713 VND 715 >UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD Length = 901 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 91/305 (29%), Positives = 143/305 (46%), Gaps = 19/305 (6%) Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 ++T D++TN L++ +S E+ +++ LD + QVL+E+ IVE +LGVQW Sbjct: 603 SVTVDQRTNVLIVKDVRSNTERARSLVRSLDTQTPQVLIESRIVEANTSFSRSLGVQWGG 662 Query: 372 KNVGAQQFTN-TGLPIFNAAQGVADYKKNGGITSANP--AWDMFSAYN---GMAAGFFNG 425 + Q N TGL N G NP A ++ + G A GF G Sbjct: 663 QARAGQATGNSTGLIFPNNLAVTGGVTGTGAGLPDNPNFAVNLPTGTGQGVGGAMGFTFG 722 Query: 426 DWG------VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVF 479 G + L+A + ++ P + TLDN A N G +P SQT++ Sbjct: 723 SAGGALQLNLRLSAAENEGSVKTISAPKVTTLDNNTARINQGVSIPF---SQTSAQGVNT 779 Query: 480 NTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVLVK 538 VE + L+VTP + + +VL+ I + D SS G P+ + VLVK Sbjct: 780 TFVEARL---SLEVTPHITQDGSVLMSINASNNQPDPSSTGANGQPSIQRKEANTQVLVK 836 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 G+T V+GG+ QV+ VP L IP++G LF+ S ++ L++FI P I+ Sbjct: 837 DGDTTVIGGIYVRRGATQVNSVPFLSRIPVLGLLFKNNSETDTRQELLIFITPRILNRQT 896 Query: 599 VYRSL 603 + ++L Sbjct: 897 IAQTL 901 >UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadaceae RepID=Q2P6L4_XANOM Length = 649 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 30/310 (9%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 + ADE+TN+L+I+ ++ +I+ +D QVL+E+ IV D +LG ++ Sbjct: 337 LVADERTNTLMISDIPKKVAQMRELISHIDRPVDQVLIESRIVIATDTFARDLGARFGII 396 Query: 373 NVGAQQFTNTGLP----IFNAAQGVADYKKNGGITSANPAWDMFSAYN---GMAAGF--- 422 + + L N + A NGG ++ PA S N G GF Sbjct: 397 GATGRGILSGSLDSNTNYLNTSAKRASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTN 456 Query: 423 -------------FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 FN D + L+A+ + ++++ P IVT + + G+++ ++ Sbjct: 457 TPGGLAYTLLGSNFNLD--IELSAMQQEGRGEVVSNPRIVTANQREGVIKQGREIGYVTI 514 Query: 470 SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI---EQEVSS-VDSSSNSTLGPT 525 S + +G V+ K V +LKVTP + + V L + + EV+ +D T+ P Sbjct: 515 SGSGAGGGSQANVQFKEVLLELKVTPTITNDNRVFLNMNVKKDEVARLIDLPLYGTV-PE 573 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 N R I AVLV GETVV+GG+ + +E VSKVP LGDIP +G LF+ + K L Sbjct: 574 INRREINTAVLVGDGETVVIGGVYEFTDRESVSKVPFLGDIPFLGNLFKKRGRSKEKAEL 633 Query: 586 MVFIRPTIIR 595 +VF+ P ++R Sbjct: 634 LVFVTPKVLR 643 >UniRef50_Q01NT3 Type II and III secretion system protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NT3_SOLUE Length = 752 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 29/287 (10%) Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 N+++I E++ ++ +LDI QVL++A I EV GV F Sbjct: 464 NTILIQGTPQEYEQILGLLRQLDIAPRQVLIDAKIYEVDLNGAFAAGVSAYLDKKDTGPF 523 Query: 380 TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNK 439 + T NAA G GG+T A + ++ +AA LTA + + Sbjct: 524 SRT----LNAATGA------GGLTLTTGAL-VLRSHELLAA----------LTASETASH 562 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLS-----GSQTTSGDNVF-NTVERKTVGTKLKV 493 + +++ PSI+ D+ A+ NVG DVPVL+ G +SG +VF NTV ++ G L + Sbjct: 563 SKVISAPSIIATDSVPATLNVGDDVPVLTSQAVAGGVQSSGSSVFTNTVSNRSTGVTLSI 622 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSS-SNSTL-GPTFNTRTIQNAVLVKTGETVVLGGLLDD 551 +VN V L + Q VSS +NS + P+F+ R+ Q + V+ G+TV +GG++ + Sbjct: 623 MARVNSSGIVTLIVNQNVSSPQPPPANSAIQSPSFSNRSFQTQLTVQDGDTVAIGGIILE 682 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 + + + VP L +P +G F S +++ L+VF+ P +I D + Sbjct: 683 SNLQSSAGVPFLHRLPGIGAAFGAKSYTKSRTELVVFLTPRVIYDTN 729 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 52/253 (20%), Positives = 123/253 (48%), Gaps = 13/253 (5%) Query: 34 NADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITL 93 NA + + ++++ + L ++DP+V+GT+S+ + +Y +IL + G +++ + Sbjct: 86 NASLTEMIDLLAKRLKINYILDPAVRGTVSIFTYGEVKPVDYMPLLETILRVNGDAMVKV 145 Query: 94 DNGF--LKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAG 151 + + + V R + P + D + ++ ++ L+ A ++A L++ + G Sbjct: 146 GDMYRIVPVNRINQLPIQPMVNVDPKTLPDDERMIMNLIFLKYATASEIANLIKPFLGEG 205 Query: 152 SVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV--IGTEKQQIIHLEYASAEDLAEIL 209 + + YE +N+LIL + + + +E+I D ++ ++ +E + DL + L Sbjct: 206 AYAST--YEAANLLILEDNSRNMRRTMELIGLFDSDQFAGQRVRLFEVENSRPSDLQKEL 263 Query: 210 NQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA-RQRITSLLKSLDVE-ESEEG- 266 Q+ +++ S+ + K + R N++I P ++ + LD+ ++ G Sbjct: 264 EQVF-KAYALSEKGS--GVKFIPVDRINTIIAVAPNPGIFTQVEQWIGKLDIAVKASAGA 320 Query: 267 -NTRVYYLKYAKA 278 N+ VY LKY++A Sbjct: 321 VNSYVYRLKYSRA 333 >UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxobacter RepID=A7H857_ANADF Length = 893 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 97/321 (30%), Positives = 147/321 (45%), Gaps = 37/321 (11%) Query: 299 ARKPSSSGAMDNV-----AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 AR SG + +V +++ DE+TN L++ Q + ++ LD QVL+E+ Sbjct: 574 ARAGDVSGRVKDVLSERGSVSTDERTNVLIVKDVQEALVRAEGLVRNLDTEIPQVLIESR 633 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTN-TGLPIF-----NAAQGVADYKKNGGITSANP 407 IVE LGVQW G FT TG P N A N T+ANP Sbjct: 634 IVEASSNFNKALGVQWG----GNASFTQATGNPTGVAFPNNVAAAGGAGPGNSFGTAANP 689 Query: 408 AWDM-------------FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNK 454 + + G A G FN + L+AL +N ++ P I T+DN+ Sbjct: 690 NYAVSLPAPVGDGQGGALGLVFGSAGGAFN--LNLRLSALENNGVVKTISAPKIATIDNR 747 Query: 455 LASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV 514 A+ G +P SQ ++ +E K +LKVTP V+ ++LL+I+ + Sbjct: 748 EATIGQGISIPF---SQVSASGVNTTFIEAKL---ELKVTPHVSADGSILLKIKATNNQP 801 Query: 515 DSSSNSTLG-PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLF 573 + G P+ + R + VLVK GET V+GG+ + + S+VP LG +PL+G F Sbjct: 802 NPQLTGANGQPSISKREAETEVLVKDGETTVIGGIYTRQTANRTSEVPFLGKLPLLGYFF 861 Query: 574 RYTSTERAKRNLMVFIRPTII 594 R S + L++FI P I+ Sbjct: 862 RNMSEQDDHTELLIFITPRIL 882 >UniRef50_Q21H82 Type II and III secretion system protein n=11 Tax=Gammaproteobacteria RepID=Q21H82_SACD2 Length = 727 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 153/314 (48%), Gaps = 54/314 (17%) Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV- 374 DE+TNS+++T + + ++ R+DI QV++EA IV LGV+ A V Sbjct: 427 DERTNSIILTDTEEKIDDFRRLVDRIDIPVRQVMIEARIVIANSDFRKELGVRMAGDAVE 486 Query: 375 ----GAQQFTNTG-LPIFNAAQG-------------VADYKKNGGITSA-------NPAW 409 G +F TG L AA G + + S+ NPA Sbjct: 487 TSVSGDTKFEMTGRLTGLTAADGSGPEALFVDTDGDGVTDDERSLLDSSLVDLGVFNPAG 546 Query: 410 DMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV--- 466 +N +++ F G+ L+AL ++ +I++ P ++T D + AS G ++P Sbjct: 547 AF--TWNVISSNFL---LGMELSALENSGYAEIVSQPKVITGDKQKASIESGTEIPYQEE 601 Query: 467 -LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI---EQEVSSVDSSSNSTL 522 SG TTS K KL+VTPQ+ + V++++ + +SS+D++S Sbjct: 602 SASGGTTTS---------FKEAVLKLEVTPQITPDNRVIMDLVINQDSISSIDANSGI-- 650 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLL--DDFSKEQVSKVPLLGDIPLVGQLFRYTSTER 580 P + ++ VLV GET+VLGG+ + F+ E +KVPLLGDIP VG+LFR Sbjct: 651 -PVIDITQLETQVLVADGETIVLGGIYTTNTFTGE--TKVPLLGDIPFVGKLFRNDFKSE 707 Query: 581 AKRNLMVFIRPTII 594 KR +++FI P I+ Sbjct: 708 DKREILIFITPRIM 721 >UniRef50_C8X4Y6 Type IV pilus secretin PilQ n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4Y6_DESRD Length = 719 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 32/289 (11%) Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 I D +TN+L+++ + K+ +VI RLD QVL+EA IV +D +LGV A + Sbjct: 455 IGQDARTNTLIVSDTRDNIRKVRSVIDRLDRPEPQVLIEARIVYAKDAFKRSLGVSLAGE 514 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKN------GGITSANPAWDMFSAYNGMAA-GFFNG 425 ++ V Y+K+ G T +M A + ++ F Sbjct: 515 -------------YYDDVGAVGQYEKSLSAGVLQGFTPEVSTVNMQGALDKISGIDLFEL 561 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 D + L L K +++P +VTL+N+ A + Q + + + S++ SG +E Sbjct: 562 DAQLKLGELKGVTKT--ISSPRLVTLNNQQA--EISQGIKIANESESESGGT---DIEYT 614 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 KL V PQ+ D V+L+++ + S + G TRT + +LV+ ETVVL Sbjct: 615 EATLKLAVQPQITPDDKVILDLD-----IADDSPTENGEDIETRTARTKLLVENQETVVL 669 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 GG+ + ++VP LGD+PL+G LF+ + R L++FIRPTI+ Sbjct: 670 GGVYQVIENNEKNQVPGLGDVPLLGWLFKTDNVNNENRELLIFIRPTIL 718 >UniRef50_B5JQS4 Bacterial type II and III secretion system protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQS4_9BACT Length = 582 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 100/388 (25%), Positives = 177/388 (45%), Gaps = 79/388 (20%) Query: 268 TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITAD 327 T ++ + YA+A ++ L + + SS G A+ D ++N+L+++ Sbjct: 184 TEIFMVNYAEADSIASTLRNLVD------------SSKGG----AVQVDTRSNALIVSER 227 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV-----------------QW- 369 S E + V+ RLD QV +E +EV + + N+GV QW Sbjct: 228 ASKMEDIRQVVERLDKPTQQVFIETRFIEVTNTDVKNIGVNWSTLRNYGVSVGNINKQWG 287 Query: 370 ----------------ANKNVGAQQFTNT-----GLPIFNA-------AQGVADYKKNGG 401 A+ NV F + G+ + N + + D G Sbjct: 288 DSFQRQRSQGSNEDKNASTNVEGVTFEGSDSSLEGVGVRNGILRNNLTGETIIDATSVGE 347 Query: 402 ITSANPAW-DMFS-----AYNGMAAGFFNGD-WGVLLTALASNNKNDILATPSIVTLDNK 454 T + A D++S N ++ F D +G +L+AL + +++ P++VTL+N+ Sbjct: 348 STLISSAVKDLYSLVDTSGLNRSSSAVFTADQFGFVLSALKEQGGSRLVSNPTVVTLNNQ 407 Query: 455 LASFNVGQDVPV--LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 A +VG+ P+ ++ T G V + E K +G LKVTP VN + +++ EVS Sbjct: 408 EAMISVGEQFPIPNYQYNEETGGFEV-SGFEFKDIGIILKVTPSVNHTGLITMKVVPEVS 466 Query: 513 S------VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 S + N+++ P +TR + + +K G T+ +GGL++ E + VP+LG + Sbjct: 467 SRTGERSFGGAGNASI-PIISTRRTETRIALKDGFTMGIGGLMESTGTEDKNHVPVLGKV 525 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTII 594 P +G+LF++ S KRNL++FI I+ Sbjct: 526 PGLGRLFKHESKSETKRNLLIFITARIL 553 >UniRef50_C4ZLP2 Type II and III secretion system protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZLP2_THASP Length = 625 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 46/333 (13%) Query: 280 NLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIA 339 NL +L G + G R+ S N + + ++ ++ A Q E+L +A Sbjct: 234 NLAAILAGPGRA--PDCGGERRGESPAGCRNADLMLNRESGIVMARATQRQHEQLEAFLA 291 Query: 340 RLD-IRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKK 398 + R QV++EA IVEV +G G+ W T G+P ++ + Sbjct: 292 GVQRAARRQVMIEATIVEVTLADGYRQGIDW----------TRLGVPSWSVRP-----RG 336 Query: 399 NGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASF 458 +G TS P SA N D + L L + +L++P + L+N+ A Sbjct: 337 SGDATSGQPTLSYLSA---------NSD--IRLELLETFGTVKVLSSPRLSVLNNQTAML 385 Query: 459 NVGQDVP-VLSGSQTTSGDN-------VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE 510 V ++V L S TT D+ T + +VG + VTPQ++ + L + Sbjct: 386 KVVEEVVYFLVDSTTTEYDDRKQARISATTTPQSVSVGMVMSVTPQISADGDITLNVRPT 445 Query: 511 VSSVDS---SSNSTLG------PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVP 561 +S + N +LG P TR I++ + +++GE VLGGL++D ++P Sbjct: 446 ISGISGFKDDPNPSLGDIPNRVPQIRTREIESMLRLRSGEVAVLGGLMEDRIDHDTGRIP 505 Query: 562 LLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 L GD+P+VG+LF + L++F+RP +I Sbjct: 506 LFGDLPVVGELFTRRDNNVRRTELLIFLRPLLI 538 >UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobacillus RepID=B5EP42_ACIF5 Length = 784 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 99/376 (26%), Positives = 162/376 (43%), Gaps = 58/376 (15%) Query: 268 TRVYYLKYAKATNLVEVLTGV---SEKLKDEKGNARKPSSSGAMDNV------------- 311 T + ++YAKA+ + +L G E E GN P+ + A+ + Sbjct: 399 TELIRIRYAKASEIASLLQGFDQNKEPGGGETGNEMNPAQNAALASALGIPNSSLIGNSL 458 Query: 312 -----AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 ++ +TNSL++ + +IA++D QVL+EA IV+V +LG Sbjct: 459 LGPRGSVAVVTRTNSLLVRDTPQDIANIKHLIAKIDRPVPQVLIEARIVQVTTSAAQSLG 518 Query: 367 VQWANKNVGAQ-----QFTNTGLPIFNAAQGVA-----------------------DYKK 398 V W + TG + QG A Sbjct: 519 VNWGGTYTSGGGGGIVNLSGTGATGVTSTQGGAYPMSGTTTTTGTGFTTPALVNLVPSTA 578 Query: 399 NGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASF 458 + S NPA F+ G AAG N + L AL ++N+ I+++P ++T DN+ A Sbjct: 579 GTALASMNPASLGFAL--GTAAG--NRILNLQLQALQADNRAKIISSPKVLTQDNEKAVI 634 Query: 459 NVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS 518 GQ++P T+SG V K L VTP ++ + L+++ + + Sbjct: 635 EQGQEIPYQQA--TSSGATA---VSFKKAVLSLDVTPHISPNGKITLDVDARNDQPNYAQ 689 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 G NT+ ++ +LV G+TVV+GG+ D + + + VPLL DIPL+G LF+ Sbjct: 690 AMPSGIPINTQQVKTKLLVNNGQTVVIGGIYTDSTTQNETGVPLLRDIPLLGWLFKSHIN 749 Query: 579 ERAKRNLMVFIRPTII 594 AK L+VF+ P ++ Sbjct: 750 SVAKTELLVFLTPKVV 765 >UniRef50_A1WEI0 Type II and III secretion system protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEI0_VEREI Length = 714 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 12/249 (4%) Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQ-GVADYKKNGGITSAN 406 VL++ +VE LG++WA K G PI Q G+ ++ IT+A+ Sbjct: 221 VLMDVKVVEFPVNELRELGLRWAAK--GGASIGGIWSPIRRVHQDGLRIDVESPPITAAD 278 Query: 407 PAWDMFSAYNGM-AAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP 465 D+ G+ N G L LAS K ILA P + + A F G + P Sbjct: 279 --GDLIPLPKGLNILSALNMGLGAKLDLLASQGKASILAQPQLSARNGAKAEFLAGGEYP 336 Query: 466 VLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT 525 ++ S TV K G +LK+TP+V+ + EI+ EVS++D S ++ GP Sbjct: 337 YVASSINGP------TVMFKPYGIRLKITPRVDRNGVIRAEIDSEVSNIDPSISTAAGPA 390 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 + R V+ GET+VL GL+ + + + KVP LGD+P++G LFR + + L Sbjct: 391 LSVRRTFTEFNVQNGETMVLSGLMSRKTSQNIDKVPFLGDLPVLGALFRSKRFQNDETEL 450 Query: 586 MVFIRPTII 594 +VF+ PT+I Sbjct: 451 VVFVTPTVI 459 >UniRef50_B1Y075 Pilus (MSHA type) biogenesis protein MshL n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y075_LEPCP Length = 577 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 89/298 (29%), Positives = 143/298 (47%), Gaps = 23/298 (7%) Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QV++EA I+EV+ G+ G+ W+ + GL + GG TS Sbjct: 252 QVMLEAKILEVELGSEAQSGINWSAFGRALGGALSIGLVQPGVTLAGSGALTLGG-TSIT 310 Query: 407 PAWDMFSAYNG---MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 P ++ ++ +G F + ++ LL+ L S K +L++P I TL+N+ A VG D Sbjct: 311 PGGNLAASSSGAPFYGLAFQSANFAALLSFLESQGKVQVLSSPRIATLNNQKAVLKVGSD 370 Query: 464 VPVLSGSQTTSGDNVFNTVERKTV-------GTKLKVTPQVNEGDAVLLEIEQEVSSV-D 515 ++G +T+ + +V G L VTPQ+++ V+L + +S+V + Sbjct: 371 ELYVTGVSSTTTATGSTSTSTPSVVLQPFFSGIALDVTPQIDDQGQVMLHVHPAISTVSE 430 Query: 516 SSSNSTLGP------TFNTRTIQNA---VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 N LG + T+ V V+ G+ V +GGL+ +E+ S VP LGD+ Sbjct: 431 KQKNINLGSLGSYQLPLASSTVNETDSIVRVRDGQIVAIGGLMSQEQREERSAVPGLGDV 490 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSK 624 PLVG LFR TST KR L++ I+PT+IR D + + + Q Q R D S+ Sbjct: 491 PLVGGLFRQTSTVMRKRELVILIKPTVIRADGPWP--EADTHQPASQLQPWRPDAMSQ 546 >UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter RepID=B9M3I8_GEOSF Length = 911 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 27/292 (9%) Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 D I+ D +TN +++ + E + ++ LD QV++EA IVE +LGVQ Sbjct: 640 DRGIISTDARTNRVIVKDITTAIEDMRMLLKSLDTPEKQVMIEARIVEASTSFVRDLGVQ 699 Query: 369 WA------NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 W + +V +TG F +A G P + ++ +A+ Sbjct: 700 WGIHYIDGSASVAGISRLDTG---FGGQVAIAPTSGTSG-----PGAAVGMSFGKLAS-- 749 Query: 423 FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTV 482 N + L+A + ++ I++TP +VTL+NK A + G +P QTTS + Sbjct: 750 -NIQLDMRLSAAVTADQIKIMSTPRVVTLNNKPAKISQGASIPY----QTTSAEGT--KT 802 Query: 483 ERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGET 542 E L+VTP + ++ ++I+ +S + S P N + +L+K GET Sbjct: 803 EFVEAALTLEVTPHITSDGSIGMKIKASNNSAGTGSP----PPINKKEATTELLIKNGET 858 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 V+GG+ D E VP L DIPL+G LF+ + ++K L++FI P I+ Sbjct: 859 TVIGGIYVDSDTESDKGVPFLQDIPLLGWLFKSNTKNKSKNELLIFITPKIV 910 >UniRef50_C1ZJR8 Type II secretory pathway, component PulD n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJR8_PLALI Length = 915 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/332 (28%), Positives = 162/332 (48%), Gaps = 40/332 (12%) Query: 302 PSSSGAMDNVAITADE---QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 PSS G +N + Q ++L++ + V ++ VI +DI QV+++A I+ V+ Sbjct: 468 PSSVGIAENATDAGGDSLSQRDALLVQDYEEVINEIDRVIIEMDIPPLQVIIDAKILSVK 527 Query: 359 DGN----GLNLGVQWANKNV-----GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW 409 + G+NL + +KN+ GA T++G P GG S P Sbjct: 528 LTDDMAFGVNLALLGGDKNLAVTGNGASIATSSGFP--------------GGTGSIIPPG 573 Query: 410 DMFSAYN-GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP--V 466 F A G+ GF GD + AL S ++A+P I L+ + A +G + Sbjct: 574 AQFLANTAGLKYGFIAGDITGFIRALESIADTSLVASPQIRALNKQRAEMIIGNRLSYKT 633 Query: 467 LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF 526 L+ + T + +NV N +E GTKL + P + V +E+ E S + ++ L P Sbjct: 634 LAFNSTQTIENV-NFLES---GTKLIIRPFIAPDGLVRMEVHPERSRAVINQSTGL-PDQ 688 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 +T + V+V+ G+TVV+GGL+ + S E + +VP+LG IPLVG FR S+ + L+ Sbjct: 689 DTTEVTTNVMVRDGQTVVIGGLISEESTESIDRVPVLGAIPLVGAAFRNKSSRIERTELI 748 Query: 587 VFIRPTII------RDDDVYRSLSKEKYTRYR 612 V I P I+ + D+ ++ ++E+ +R Sbjct: 749 VLITPRIVDEFAAAAEGDILQAATEERAAHFR 780 >UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Tax=Legionella RepID=Q5X6H2_LEGPA Length = 698 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 94/364 (25%), Positives = 166/364 (45%), Gaps = 47/364 (12%) Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 +E+ E + + + YAKA ++ ++ L ++G I+ D +T Sbjct: 360 IEKLEPIRSDLIQINYAKAADIAVLIKDKQNSLLSDRGK--------------ISVDART 405 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV----- 374 N++ I + E++ +I +LDI QVL+EA IVEV ++G++W Sbjct: 406 NTIWIQDTGTKIEEVRELIKQLDIPVKQVLIEARIVEVTKDFSQDIGIRWGVSRPTHLSG 465 Query: 375 ---GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD--WGV 429 GA + P A V ++ +A P A G+A N + + Sbjct: 466 TLEGANELARGTAP----ANVVPLERRLNLDLAAAPLTGATPASVGIALAKLNDNILLDL 521 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 L+AL S + +++++P ++T + + A G+++P T+SG V K Sbjct: 522 ELSALESEGRAELISSPRLITTNQQAAVIESGEEIPYQEA--TSSGAT---AVAFKKAVL 576 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVLVKTGETVVLGGL 548 LKVTPQ+ +L++++ ++ S + LG P T+ IQ VLV G+T+VLGG+ Sbjct: 577 SLKVTPQITPDGKILMDLQ--INQDTPSPQTFLGVPAIITKEIQTNVLVNNGQTIVLGGI 634 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII-----------RDD 597 + ++++P G++P+VG LF L++FI P II R+ Sbjct: 635 YKQDKNKVINRIPFFGELPVVGILFSNRQITLKNEELLIFITPRIITNALSITTIEGREK 694 Query: 598 DVYR 601 DVY+ Sbjct: 695 DVYK 698 >UniRef50_UPI0001744674 general secretion pathway protein D n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744674 Length = 759 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 81/305 (26%), Positives = 138/305 (45%), Gaps = 34/305 (11%) Query: 334 LATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA--------NKNVGAQQFTNTGLP 385 L ++ ++D R Q+++ AII E G G+ W N +G T+T Sbjct: 435 LDDLLTQMDKRPPQIILSAIIGEFTTGKDFRFGLDWVRTLEQVNDNLVIGGINKTST--- 491 Query: 386 IFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILAT 445 + D G + PA + Y G V L L +++ +L Sbjct: 492 --TETNAMTDLAALGNVADFLPALQGLTVY-----GKIGKHLNVFLNTLEESDRFHVLQR 544 Query: 446 PSIVTLDNKLASFNVGQDVPVLSGSQTTSG-------DNVFNTVERKTVGTKLKVTPQVN 498 P + TL++K A+ + GQ + + G +SG + + + KL + P + Sbjct: 545 PYVTTLNHKKATISTGQQL-AIPGQTYSSGIGSDPDTNGFVSNTQYIPAELKLDIVPHIY 603 Query: 499 EGDAVLLEIEQEVSSVDSSSNSTLG----PTFNTRTIQNAVLVKTGETVVLGGLLDDFSK 554 + + V LE Q+ ++D +S +T+ P +T+T+ N V+V G T++LGGL+ + + Sbjct: 604 DKNEVKLEFVQQ--NLDIASYTTISGNQVPNLSTQTLSNTVVVPNGATIILGGLITERDR 661 Query: 555 EQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD--VYRSLSKEKYTRYR 612 S VP+L IPLV LF T+ + +R LM+F++P I+ DD + + E R Sbjct: 662 NNKSGVPVLSRIPLVKHLFGSTAKTKERRELMIFVQPIIVASDDSIAQKQVPIENLNRSF 721 Query: 613 QEQQQ 617 E QQ Sbjct: 722 PEVQQ 726 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 101/185 (54%), Gaps = 6/185 (3%) Query: 35 ADIRQFVEIVGQHLGKTILIDPSVQGTI-SVRSNDTFSQQEYYQFFLSILDLYGYSVITL 93 A I + +EI + GK I+ DP ++G + S+ + + + +F L + GY+++ Sbjct: 41 APIGEILEIYQELTGKKIIRDPKLEGVVLSMDTGGEMPKAQVIEFIEKSLLISGYAIVPS 100 Query: 94 DNGFLKVV--RSANVKTSPG--MIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMD 149 +KV+ + + ++ G MI D+SR GD++V+ ++PL+++ A + L Q++ Sbjct: 101 GEQMVKVLAFEAGKLPSTEGVDMILDASRLPQGDQVVSYLLPLQHLDADEAGQALSQIIT 160 Query: 150 AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE-KQQIIHLEYASAEDLAEI 208 G ++ ++ L++T ++TI +I+++++VD +E + LE A AE++A Sbjct: 161 LHPYGKILAVPKASALVITENSTTIRAIIDLVRQVDTPSSETTTKKYFLERADAEEVART 220 Query: 209 LNQLI 213 + L+ Sbjct: 221 IGTLL 225 >UniRef50_Q1Q8Q7 Type II and III secretion system protein n=5 Tax=Moraxellaceae RepID=Q1Q8Q7_PSYCK Length = 792 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 103/407 (25%), Positives = 175/407 (42%), Gaps = 51/407 (12%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 +L +K + + ++I+ P E A Q L VE T L YAKA +++ Sbjct: 396 ILKSKNLGKRENGNVILVAPSTELAEQEARELEAQQAVESYAPLRTEYIRLSYAKAADVL 455 Query: 283 EVLTGVSEKLKDEK----GNARKPSSSGAMDNVA-ITADEQTNSLVITADQSVQEKLATV 337 +++ S NA S+ + N +T DE+TN+L++ + E + + Sbjct: 456 TLISQGSGGASGGSNTGSANANTKDSNSLLSNRGTVTVDERTNTLIVKDVAASIENIHKL 515 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 I ++DI QV++EA IV D +GV+W + GA N L + + Q + D K Sbjct: 516 IGKIDIPVRQVMIEARIVSATDSFSKEIGVRWGILSNGAAN--NRNLLVGGSNQTLWDLK 573 Query: 398 KN-------GGITSANPAWDMFSAYNGMAAGFFNGDWGV--------------------- 429 G T + P +D+ N N D GV Sbjct: 574 DFDVQTTTINGQTVSYPKYDITRPDN------LNVDLGVDNPAGRIAFGLLGISDFMLDL 627 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 L+A+ ++N+ ++++TP I+T D + A + G +P S + + F K Sbjct: 628 ELSAMQADNRGEVISTPKILTSDKQTAKVSSGTQIPYQEASASGATTTSF-----KEAAL 682 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLL 549 L+ TP + + L++ + +N +I V+V+ G+T+VLGG+ Sbjct: 683 SLEATPNITPDGKIGLQLLITNGTPTIINNQV---AIAEDSISTNVIVEDGQTIVLGGVF 739 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 + + V KVP LGD+P +G+ FR K L++FI P +I D Sbjct: 740 KNRTNNGVDKVPFLGDLPYIGRAFRKDVRSNTKEELLIFITPKLIND 786 >UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SM90_THIDA Length = 745 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 91/295 (30%), Positives = 146/295 (49%), Gaps = 24/295 (8%) Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 T + +TN+L+IT S ++ ++ARLD+ QV++EA +V LGV+ + Sbjct: 454 TYELKTNTLIITDTASKIAEVRGLLARLDVPARQVMIEARVVIADSLWSRELGVRLGTRL 513 Query: 374 VGAQQFTNTGLP-IFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG-----FFNGDW 427 A N G+ N + +A GG + P ++ + G AAG N Sbjct: 514 FKATGRDNIGVGGTLNESASIA----AGGTPTVTPQVELGTV--GAAAGQIAMSLLNASN 567 Query: 428 G----VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVE 483 G + L+AL ++N+ IL+ P ++T + K A G +P + T N TV Sbjct: 568 GNLLSLELSALEADNRGKILSNPRVMTSNQKPAVILNGTQIPFI----TPGTANSPATVT 623 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST----LGPTFNTRTIQNAVLVKT 539 K L V PQ+ DA+++ IE + ++D+++ + + P TR I+ V V Sbjct: 624 FKDAFLCLLVDPQILNNDALIMTIEVQKDAIDTANAAVGADIIAPAIATRRIKTQVRVNN 683 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 GET+VLGG+ D V KVP LGD+P +G LF+ T+ + K ++VFI P I+ Sbjct: 684 GETLVLGGIFDQTEFNNVDKVPFLGDVPGLGNLFKRTNKQDQKTEMIVFITPRIL 738 >UniRef50_C3KR31 CpaC pilus assembly protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KR31_RHISN Length = 496 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 135/270 (50%), Gaps = 17/270 (6%) Query: 347 QVLVEAIIVEVQDGNGLNLGVQWAN--KNVGAQQFTNTGLPI---FNAAQGVADYKKNGG 401 QV++E ++E G +LG+ W+ +N + T+ G+ + N A+ + D G Sbjct: 185 QVMLEVRVIEASRQTGRDLGIGWSGQGRNGIGKATTSQGITVDDDGNLARTLGDAA--GA 242 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 T P + + ++ G + +++ AL LA P+++ + + ASF+ G Sbjct: 243 ATGMQPFGQLIAKVLEISGGQID----IVINALEQKGLVRRLAQPNLIAMSGETASFHAG 298 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST 521 +VP+ S +G + + + G +L +P V +G + L+IE EVS +D S + Sbjct: 299 GEVPIQS--TVANGATLATETDYRPFGVRLTFSPVVLDGGLISLKIEPEVSEIDPSISVN 356 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 P F +R V ++ G++ + GLL + + V ++P LG +P++G LFR TS + Sbjct: 357 GNPGFISRAASTTVALRDGQSFAMAGLLQSVNAKDVQQLPWLGQVPVIGALFRSTSFLKR 416 Query: 582 KRNLMVFIRPTIIR----DDDVYRSLSKEK 607 + +L++ + P I+R +D+Y L + + Sbjct: 417 ESDLVIVVTPHIVRPSKPGEDLYSPLEQTR 446 >UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIY3_THIDA Length = 656 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 99/350 (28%), Positives = 159/350 (45%), Gaps = 34/350 (9%) Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 DE+ N LV+ ++A D+ +V++E ++EV+ G L+LG+Q+ Sbjct: 298 DERLNLLVMRDTPDAIRLAERIVAVQDLAEPEVMLEVEVLEVKRGRLLDLGIQYP----- 352 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGI---TSANPAWDMFSAYNGMAAG--FFNGDWGVL 430 T + N + GG+ T+ P+ + + A + GV Sbjct: 353 ------TNFSLLNLPPATSSTIGPGGVVTNTTPPPSVLTVESLKNITASQIAISPTPGVD 406 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 L ++ +ILA P I + + A ++G VPV++ S TTS V +V VG K Sbjct: 407 LRK--QDSDVNILANPRIRVKNREKAKIHIGDKVPVIT-SNTTSTGVVSESVSYLDVGLK 463 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSV---DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGG 547 L V P V + V + + EVS++ S N TL TR + +K GET VL G Sbjct: 464 LDVEPSVLMREDVQIRVGLEVSNIVREIRSGNGTLTYQIGTRNAGTTLRLKDGETQVLAG 523 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 L+ D + S++P LGD+PL+G+LF ER K +++ I P ++R D + Sbjct: 524 LISDEDRSTASRIPGLGDLPLIGRLFSSQRDERNKTEIVLLITPRVLRSD----ATRLPA 579 Query: 608 YTRYRQEQQQRIDG------KSKALVGSEDLPVLDE--NTFNSHAPAPSS 649 T +R + I G + AL + P+ DE + ++ APAP S Sbjct: 580 LTEFRGGTENAIGGGGAVPFSAPALPEASQPPLPDEGPTSPSAIAPAPES 629 >UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2K0_9PROT Length = 688 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 97/346 (28%), Positives = 157/346 (45%), Gaps = 42/346 (12%) Query: 259 DVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQ 318 ++ + E T + L YAKA ++ +L L ++G++ +D + Sbjct: 372 EIGDLEPLRTESFQLSYAKALDIANLLKNKDTGLLSKRGSS--------------VSDLR 417 Query: 319 TNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQ 378 TN+L + + E++ T + +LD+ QV++EA VE + LG G Sbjct: 418 TNTLFVQDTPTRLEEVRTFVKQLDVPVRQVMIEARFVEAGETFNQTLG--------GRLS 469 Query: 379 FTNTGLPIFNAAQGVADYKKNG-GITSANPAWDMFSAYNGMAAGFFNGDWGVLLT----- 432 +T G + + TS P S GM FN +LT Sbjct: 470 YTGPGSTVAGGGFAGPAGNRAALSTTSLLPGAG--SVTGGMTLNLFNAAATKVLTLELNA 527 Query: 433 -ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKL 491 L KN +A+P +VT D A+ G +VP L Q TS ++ +G L Sbjct: 528 SELDGTTKN--IASPRVVTGDKTPATIESGVEVPYL---QATSSGATSVAFKKAVLG--L 580 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVLVKTGETVVLGGLLD 550 VTPQ+ D V +++ S D+ N G P+ NT+ + VLV G TVV+GG+ Sbjct: 581 TVTPQITPDDHVGMKLS---VSQDTVGNIYSGVPSINTKKVDTQVLVDNGGTVVIGGVYT 637 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 + + ++PLLGDIP++G LF+ + +AK+ L+VFI P I+++ Sbjct: 638 QDATDSKEQIPLLGDIPILGWLFKTDTIVKAKKELLVFITPKIVKE 683 >UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter RepID=B5E8I3_GEOBB Length = 946 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 35/296 (11%) Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 D IT DE+T+ +++ Q+ + ++ LD QV++EA IVE +LGVQ Sbjct: 675 DRGVITKDERTSRVIVKDIQTALNDMKALLKTLDAPEKQVMIEARIVEATSTFTRDLGVQ 734 Query: 369 WA------NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 W + +V +TG GG+ SA + G+ F Sbjct: 735 WGLSYRDGSASVAGINSVDTGF---------------GGVVSAAGPGSSGAGGLGLGMSF 779 Query: 423 ----FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV 478 N + L A A+ + I++TP +VTL+NK A + GQ +P QTTS + Sbjct: 780 GKLTSNIKLDMRLAAAATIGQVKIISTPKVVTLNNKAAKISQGQSIPY----QTTSAEG- 834 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 E L+VTP + +V ++I+ +S + S P N + ++V Sbjct: 835 -TKTEFVEAALTLEVTPHITADGSVSMKIKASNNSPGTGSP----PPINKKEATTELVVS 889 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 G+T V+GG+ D E + VP L DIPL+G LF+ S ++ K L++FI P I+ Sbjct: 890 NGDTTVIGGIYVDSDTESDTGVPFLSDIPLLGWLFKSNSKQKTKTELLIFITPKIV 945 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citroba... 610 e-173 UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gam... 608 e-172 UniRef50_C4L998 General secretion pathway protein D n=2 Tax=Bact... 580 e-164 UniRef50_P31700 General secretion pathway protein D n=5 Tax=Ente... 572 e-161 UniRef50_P31701 General secretion pathway protein D n=27 Tax=Ent... 571 e-161 UniRef50_A8A4B9 General secretion pathway protein D n=30 Tax=Esc... 554 e-156 UniRef50_P45779 General secretion pathway protein D n=102 Tax=Pr... 546 e-153 UniRef50_A8GJQ5 General secretion pathway protein D n=6 Tax=Ente... 544 e-153 UniRef50_C4UIB8 General secretion pathway protein D n=4 Tax=Yers... 538 e-151 UniRef50_A1JPH4 General secretion pathway protein D n=28 Tax=Yer... 538 e-151 UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamm... 528 e-148 UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified... 528 e-148 UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desu... 525 e-147 UniRef50_Q0VSG7 General (Type II) secretion pathway protein D n=... 519 e-145 UniRef50_Q8VPC8 Hypothetical type II secretion protein n=6 Tax=E... 515 e-144 UniRef50_A1WZM1 General secretion pathway protein D n=1 Tax=Halo... 511 e-143 UniRef50_Q0A5Z6 General secretion pathway protein D n=2 Tax=Ecto... 509 e-142 UniRef50_C7R8G0 General secretion pathway protein D n=1 Tax=Kang... 508 e-142 UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cell... 501 e-140 UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax... 499 e-139 UniRef50_Q1N1M8 Type II secretory pathway, component PulD n=1 Ta... 492 e-137 UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Arom... 491 e-137 UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Side... 489 e-136 UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Mari... 486 e-136 UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Pro... 483 e-135 UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desu... 483 e-135 UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acineto... 482 e-134 UniRef50_C7HZF2 General secretion pathway protein D n=1 Tax=Thio... 482 e-134 UniRef50_A4BES0 Type II secretory pathway, component PulD n=1 Ta... 482 e-134 UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 T... 481 e-134 UniRef50_D0KWK8 General secretion pathway protein D n=1 Tax=Halo... 478 e-133 UniRef50_B3R7X2 General Secretory Pathway protein D, type II sec... 478 e-133 UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gamm... 478 e-133 UniRef50_A1U289 General secretion pathway protein D n=4 Tax=Gamm... 477 e-133 UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax... 477 e-133 UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pse... 476 e-133 UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desu... 476 e-132 UniRef50_A8ZWZ5 General secretion pathway protein D n=2 Tax=Desu... 472 e-131 UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gamm... 471 e-131 UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax... 466 e-129 UniRef50_Q2Y7S4 Type II and III secretion system protein n=1 Tax... 466 e-129 UniRef50_Q221L0 Type II and III secretion system protein n=1 Tax... 466 e-129 UniRef50_Q48JN3 General secretion pathway protein GspD n=2 Tax=P... 462 e-128 UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burk... 462 e-128 UniRef50_B1JDL3 General secretion pathway protein D n=6 Tax=Pseu... 459 e-127 UniRef50_B3E7M1 General secretion pathway protein D n=8 Tax=Geob... 456 e-127 UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax... 456 e-126 UniRef50_Q7NRG7 Probable type II secretion system protein n=1 Ta... 454 e-126 UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyph... 453 e-125 UniRef50_C4K9Q5 General secretion pathway protein D n=1 Tax=Thau... 451 e-125 UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphi... 446 e-124 UniRef50_C6XJ47 General secretion pathway protein D n=1 Tax=Hirs... 445 e-123 UniRef50_Q1JVV5 Type II and III secretion system protein n=1 Tax... 441 e-122 UniRef50_C6CIN5 General secretion pathway protein D n=1 Tax=Dick... 436 e-120 UniRef50_B8GXR3 Type II secretion pathway protein D n=3 Tax=Caul... 436 e-120 UniRef50_C5CPK3 General secretion pathway protein D n=1 Tax=Vari... 432 e-119 UniRef50_Q1YQU4 Putative general secretion pathway protein n=1 T... 432 e-119 UniRef50_D0XKD9 General secretion pathway protein D n=1 Tax=Brev... 430 e-119 UniRef50_Q6MMM9 General secretion pathway protein D n=1 Tax=Bdel... 428 e-118 UniRef50_A0YBF4 Type II and III secretion system protein n=1 Tax... 427 e-118 UniRef50_Q1D9E0 General secretion pathway protein D n=2 Tax=Cyst... 427 e-118 UniRef50_A3W186 General secretion pathway protein D n=1 Tax=Rose... 425 e-117 UniRef50_C1SHL2 General secretion pathway protein D n=1 Tax=Deni... 425 e-117 UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n... 420 e-115 UniRef50_C6C305 General secretion pathway protein D n=1 Tax=Dick... 419 e-115 UniRef50_Q5ZVW8 Type II protein secretion LspD n=7 Tax=Legionell... 419 e-115 UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyph... 419 e-115 UniRef50_C5S7Y5 General secretion pathway protein D n=1 Tax=Allo... 417 e-115 UniRef50_C8PXJ4 General secretion pathway protein D n=1 Tax=Enhy... 416 e-114 UniRef50_B7RHZ1 General secretion pathway protein D n=1 Tax=Rose... 416 e-114 UniRef50_Q4UYQ6 Type II secretion system protein D n=6 Tax=Prote... 414 e-114 UniRef50_A3VSK1 General secretion pathway protein D n=1 Tax=Parv... 414 e-114 UniRef50_O67320 General secretion pathway protein D n=1 Tax=Aqui... 412 e-113 UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseu... 410 e-113 UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhiz... 409 e-112 UniRef50_A9GDS2 General secretion pahtway protein D n=1 Tax=Sora... 408 e-112 UniRef50_A3SDT6 General secretion pathway protein D n=1 Tax=Sulf... 408 e-112 UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobiu... 408 e-112 UniRef50_Q2G4Y4 Type II and III secretion system protein n=3 Tax... 407 e-112 UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D prot... 407 e-112 UniRef50_A8UQX4 General secretion pathway protein D n=1 Tax=Hydr... 399 e-109 UniRef50_C0QPL4 General secretion pathway protein D n=1 Tax=Pers... 392 e-107 UniRef50_C6BTY5 General secretion pathway protein D n=1 Tax=Desu... 392 e-107 UniRef50_C0QK68 GspD2 n=1 Tax=Desulfobacterium autotrophicum HRM... 389 e-106 UniRef50_B4UDG8 General secretion pathway protein D n=4 Tax=Anae... 389 e-106 UniRef50_C1TK46 General secretion pathway protein D n=1 Tax=Deth... 388 e-106 UniRef50_A6Q682 Type II secretion system protein D n=1 Tax=Sulfu... 387 e-106 UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Synt... 386 e-105 UniRef50_D0LLW3 General secretion pathway protein D n=1 Tax=Hali... 374 e-102 UniRef50_B7S1V0 General secretion pathway protein D n=1 Tax=mari... 373 e-101 UniRef50_C0GQP0 General secretion pathway protein D n=1 Tax=Desu... 370 e-100 UniRef50_Q82WH1 General (Type II) secretion pathway (GSP) D prot... 369 e-100 UniRef50_B0T7N8 General secretion pathway protein D n=1 Tax=Caul... 366 2e-99 UniRef50_A6DDM8 Type II and III secretion system protein:NolW-li... 365 4e-99 UniRef50_B4U6K2 General secretion pathway protein D n=1 Tax=Hydr... 364 6e-99 UniRef50_B9L741 Putative GspD n=1 Tax=Nautilia profundicola AmH ... 363 2e-98 UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Mari... 360 1e-97 UniRef50_C1DRT4 General secretion pathway protein D n=2 Tax=Gamm... 360 1e-97 UniRef50_C5SIE2 Type II and III secretion system protein n=1 Tax... 354 5e-96 UniRef50_A6FZI7 Type II and III secretion system protein n=1 Tax... 354 6e-96 UniRef50_Q1YMS0 Putative general secretion pathway (GSP) protein... 351 4e-95 UniRef50_A4SKW4 S-protein secretion component D n=2 Tax=Gammapro... 348 3e-94 UniRef50_A7BV51 Bacterial type II and III secretion system prote... 343 9e-93 UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Synt... 343 1e-92 UniRef50_B0BAC9 Type III secretion structural protein (Outer mem... 343 1e-92 UniRef50_D0X4T6 Putative uncharacterized protein n=1 Tax=Vibrio ... 341 5e-92 UniRef50_B1ZUM2 Type II and III secretion system protein n=1 Tax... 340 8e-92 UniRef50_C1A7C5 Putative general secretion pathway protein D n=1... 340 1e-91 UniRef50_A6DJN7 Secretion protein XqhA n=1 Tax=Lentisphaera aran... 340 1e-91 UniRef50_B5JLH7 Bacterial type II and III secretion system prote... 336 2e-90 UniRef50_B6QWW0 General (Type II) secretion pathway (GSP) D prot... 335 5e-90 UniRef50_Q15QU6 Type II and III secretion system protein n=1 Tax... 333 1e-89 UniRef50_Q89HG9 Blr6022 protein n=3 Tax=Bradyrhizobium RepID=Q89... 332 2e-89 UniRef50_B9XM19 Type II and III secretion system protein n=1 Tax... 332 2e-89 UniRef50_Q3JD22 General secretion pathway protein D n=2 Tax=Nitr... 331 7e-89 UniRef50_Q0BZ85 Type II secretion system protein n=1 Tax=Hyphomo... 329 2e-88 UniRef50_Q04SX5 Type II secretory pathway component, protein D n... 329 2e-88 UniRef50_D0HB85 S-protein secretion component D n=1 Tax=Vibrio m... 326 2e-87 UniRef50_Q212Y1 Type II and III secretion system protein n=5 Tax... 325 5e-87 UniRef50_P29041 General secretion pathway protein D n=22 Tax=Xan... 323 1e-86 UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Bur... 320 1e-85 UniRef50_B2IBK3 General secretion pathway protein D n=2 Tax=Beij... 317 9e-85 UniRef50_D1N173 Type II and III secretion system protein n=1 Tax... 313 1e-83 UniRef50_A3UH04 General (Type II) secretion pathway (GSP) D prot... 313 1e-83 UniRef50_A7IH57 General secretion pathway protein D n=1 Tax=Xant... 312 3e-83 UniRef50_B8ESI9 General secretion pathway protein D n=1 Tax=Meth... 312 3e-83 UniRef50_A4A016 General secretion pathway protein D (Precursor) ... 312 3e-83 UniRef50_C5B3Y6 Putative General secretion protein D n=1 Tax=Met... 310 2e-82 UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobaci... 308 5e-82 UniRef50_B8D2D9 Type II and III secretion system protein n=1 Tax... 307 1e-81 UniRef50_Q07N78 General secretion pathway protein D n=1 Tax=Rhod... 305 3e-81 UniRef50_A3UDE6 General secretion proteinD n=1 Tax=Oceanicaulis ... 304 7e-81 UniRef50_A8FXQ1 Type II secretory pathway component PulD-like pr... 299 2e-79 UniRef50_A4C8H8 General (Type II) secretion pathway (GSP) D prot... 298 3e-79 UniRef50_UPI0001744674 general secretion pathway protein D n=1 T... 298 4e-79 UniRef50_B8E238 Type II and III secretion system protein n=1 Tax... 297 7e-79 UniRef50_D2QZD1 Type II and III secretion system protein n=1 Tax... 297 1e-78 UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Coma... 297 1e-78 UniRef50_Q0BR89 General secretion pathway protein D n=1 Tax=Gran... 296 2e-78 UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Coma... 296 2e-78 UniRef50_C0AE16 Type II and III secretion system protein n=1 Tax... 295 3e-78 UniRef50_B8IR79 General secretion pathway protein D n=2 Tax=Meth... 295 5e-78 UniRef50_A6CD16 General secretion pathway protein D (Precursor) ... 295 5e-78 UniRef50_A9H699 General secretion pathway protein D n=3 Tax=cell... 291 7e-77 UniRef50_B5YDZ7 Bacterial type II and III secretion system prote... 291 8e-77 UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax... 289 3e-76 UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella ko... 287 8e-76 UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobac... 287 1e-75 UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-li... 286 1e-75 UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative ... 286 2e-75 UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 286 2e-75 UniRef50_A1U3Z5 Type II and III secretion system protein n=1 Tax... 285 3e-75 UniRef50_A8UYL2 Putative uncharacterized protein n=1 Tax=Hydroge... 284 5e-75 UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadace... 284 7e-75 UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fast... 283 1e-74 UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Pr... 283 2e-74 UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas in... 282 3e-74 UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteo... 281 6e-74 UniRef50_C1ZGU1 Type II secretory pathway, component PulD n=1 Ta... 281 7e-74 UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammapro... 281 8e-74 UniRef50_Q9I3W2 Probable type II secretion system protein n=1 Ta... 280 1e-73 UniRef50_A4A5L7 General secretion (Type II) pathway protein D n=... 279 2e-73 UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisser... 279 2e-73 UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=... 277 1e-72 UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas... 276 2e-72 UniRef50_D2L502 Type II and III secretion system protein n=1 Tax... 276 2e-72 UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderi... 276 3e-72 UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteob... 275 3e-72 UniRef50_Q21H82 Type II and III secretion system protein n=11 Ta... 275 3e-72 UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular or... 275 3e-72 UniRef50_Q5SII6 General secretion pathway protein (PilQ) n=5 Tax... 274 5e-72 UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella ... 274 7e-72 UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legi... 274 9e-72 UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromati... 273 1e-71 UniRef50_Q7UX59 General secretion pathway protein D [Precursor] ... 271 8e-71 UniRef50_A7BUG3 Bacterial type II and III secretion system prote... 271 8e-71 UniRef50_Q60BY4 Fimbrial assembly protein PilQ n=1 Tax=Methyloco... 270 9e-71 UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadac... 270 1e-70 UniRef50_B8KPH7 General secretion pathway protein D n=1 Tax=gamm... 270 1e-70 UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter... 270 1e-70 UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=ce... 270 1e-70 UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Ta... 270 1e-70 UniRef50_Q39X07 Type II and III secretion system protein:NolW-li... 270 1e-70 UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=A... 269 2e-70 UniRef50_B6WRK6 Putative uncharacterized protein n=1 Tax=Desulfo... 269 2e-70 UniRef50_B0UFJ1 General secretion pathway protein D n=4 Tax=Meth... 269 3e-70 UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae Re... 269 3e-70 UniRef50_A1WFQ3 General secretion pathway protein D n=1 Tax=Verm... 268 3e-70 UniRef50_Q1YS04 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=... 268 5e-70 UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans... 267 1e-69 UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS 267 1e-69 UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gamm... 267 1e-69 UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vi... 266 1e-69 UniRef50_B8GPV1 Type IV pilus secretin PilQ n=5 Tax=Chromatiales... 266 2e-69 UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Bu... 266 2e-69 UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter Re... 266 2e-69 UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein ... 265 3e-69 UniRef50_D0SET7 Type IV pilus biogenesis and competence protein ... 265 3e-69 UniRef50_Q0VMB7 Fimbrial assembly protein pilQ n=3 Tax=Gammaprot... 265 3e-69 UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax... 265 3e-69 UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter Re... 264 5e-69 UniRef50_C6Q9T0 General secretion pathway protein D n=1 Tax=Hyph... 264 6e-69 UniRef50_Q1K2X4 Type II and III secretion system protein n=1 Tax... 263 2e-68 UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax... 263 2e-68 UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 T... 263 2e-68 UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein ... 262 3e-68 UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax... 259 2e-67 UniRef50_Q5P5P1 Fimbrial type-IV assembly protein PilQ n=4 Tax=B... 259 3e-67 UniRef50_C0QUI7 Fimbrial assembly protein PilQ n=1 Tax=Persephon... 258 5e-67 UniRef50_C6HW33 Putative general secretion pathway protein D n=1... 257 8e-67 UniRef50_A6GPK2 Pili assembly protein PilQ n=1 Tax=Limnobacter s... 257 1e-66 UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 256 2e-66 UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD 256 2e-66 UniRef50_A0LPH6 General secretion pathway protein D n=1 Tax=Synt... 256 2e-66 UniRef50_C6BWY6 Type II and III secretion system protein n=1 Tax... 256 2e-66 UniRef50_Q0EXA5 Probable pilQ; fimbrial type-4 assembly signal p... 256 2e-66 UniRef50_A0P0N8 General secretion proteinD n=1 Tax=Labrenzia agg... 255 3e-66 UniRef50_A8ZSX5 Type IV pilus secretin PilQ n=1 Tax=Desulfococcu... 255 4e-66 UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnic... 255 5e-66 UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Ta... 254 5e-66 UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lo... 254 9e-66 UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 254 1e-65 UniRef50_Q1Q8Q7 Type II and III secretion system protein n=5 Tax... 254 1e-65 UniRef50_A3ERG1 Putative general secretion pathway protein D n=2... 253 1e-65 UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thio... 253 2e-65 UniRef50_B3TCB2 Putative bacterial type II and III secretion sys... 253 2e-65 UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae Rep... 253 2e-65 UniRef50_C6EGE1 General secretory pathway component, cryptic n=2... 253 2e-65 UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax... 252 3e-65 UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter p... 252 3e-65 UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Bur... 252 4e-65 UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Meth... 252 4e-65 UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxoba... 251 6e-65 UniRef50_B8CZ92 Type II and III secretion system protein n=1 Tax... 251 9e-65 UniRef50_B1J2J3 Type IV pilus secretin PilQ n=5 Tax=Pseudomonas ... 250 1e-64 UniRef50_A6C2R4 Type IV pilin multimeric outer membrane protein ... 250 1e-64 UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragme... 250 1e-64 UniRef50_Q0AF45 Type IV pilus secretin PilQ n=3 Tax=Nitrosomonas... 250 2e-64 UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiob... 249 2e-64 UniRef50_Q47JK8 Type II and III secretion system protein:NolW-li... 248 4e-64 UniRef50_A1HM79 Type II and III secretion system protein n=1 Tax... 248 4e-64 UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis... 248 8e-64 UniRef50_C4V5Y4 Fimbrial type IV assembly protein pilQ n=1 Tax=S... 248 8e-64 UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax... 247 8e-64 UniRef50_C1DU75 PilQ n=3 Tax=Sulfurihydrogenibium RepID=C1DU75_S... 247 1e-63 UniRef50_A5WCG3 Type IV pilus secretin PilQ n=2 Tax=Bacteria Rep... 246 2e-63 UniRef50_C8QE32 Type IV pilus secretin PilQ n=1 Tax=Pantoea sp. ... 245 3e-63 UniRef50_B9XBV8 Type II and III secretion system protein n=1 Tax... 245 3e-63 UniRef50_C9LRH4 Putative secretin and TonB short domain protein ... 245 4e-63 Sequences not found previously or not previously below threshold: UniRef50_Q3JLH6 Type III secretion outer membrane pore, YscC/Hrc... 244 5e-63 >UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AIN8_CITK8 Length = 640 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 370/656 (56%), Positives = 477/656 (72%), Gaps = 27/656 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK L L + A N + A+F N DIR+F++ VG++L KTIL+DPSVQG Sbjct: 1 MKKFPWACVALTTLALYSSSLFAAN--FSASFKNTDIREFIDTVGRNLNKTILVDPSVQG 58 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 T+SVR+ + ++ EYYQFFLS+LDLYG SVI +DNG +KVVRS+ +T+ IADS PG Sbjct: 59 TVSVRTYNVLTEDEYYQFFLSVLDLYGLSVIPMDNGMVKVVRSSVARTAGTPIADSKNPG 118 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 GDE++TR+V +ENVP R+LAPLLRQ+ DA +GNVVH+EPSNVL+LTG+AS +N+L+++ Sbjct: 119 KGDEIITRVVRMENVPVRELAPLLRQLNDATGIGNVVHFEPSNVLLLTGKASVVNRLVDL 178 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 ++RVD G ++++I+ L YASA++L+++LN L +E K Q L+ K+VAD+ TNSL+ Sbjct: 179 VQRVDRSGVQRREIVPLHYASAKELSDMLNNLNNEEQ-KGQNAPQLATKVVADEETNSLV 237 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 ISG E+AR R +L+ LD E++ EGNTRV+YLKYA A +V VLTG+ E++KD+ G A+ Sbjct: 238 ISGSEEARARTRTLIAQLDREQNNEGNTRVFYLKYANAAKVVPVLTGIGEQMKDKPGAAK 297 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 S A D + ITADE TNSLVITA +V L VI +LDIRR QVLVEAII EVQDG Sbjct: 298 SKSPVAATD-LNITADESTNSLVITAQPNVMNSLEKVIDKLDIRRPQVLVEAIIAEVQDG 356 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 G +LGVQW +K+ G QF TGLPI G + GMA Sbjct: 357 AGTDLGVQWTSKH-GGVQFGATGLPIGQVKNGTIKGVN----------------FTGMAT 399 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN 480 GFFNGD+G L+TAL++N KNDIL+TPS+VTLDNK ASFNVGQDVPVLSGSQTT+GDNVFN Sbjct: 400 GFFNGDFGALMTALSTNGKNDILSTPSVVTLDNKEASFNVGQDVPVLSGSQTTTGDNVFN 459 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS--NSTLGPTFNTRTIQNAVLVK 538 TVERKTVGTKLK+ PQ+N+GD + ++IEQEVSSVD+SS +S+LGPTFNTRTI N V+V Sbjct: 460 TVERKTVGTKLKILPQINDGDMIHMKIEQEVSSVDASSTEDSSLGPTFNTRTINNEVMVH 519 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 +G+TVVLGGL+++ +K+ VSKVPLLGDIPLVGQLFRYTS + KRNLMVFI T++RDDD Sbjct: 520 SGQTVVLGGLIENVTKQNVSKVPLLGDIPLVGQLFRYTSQDTTKRNLMVFIHTTVLRDDD 579 Query: 599 VYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED---LPVLDEN-TFNSHAPAPSSR 650 Y + SKEKY + R QQQR++ K ++ D LP ++ APA +SR Sbjct: 580 NYSAASKEKYDQVRARQQQRMEEKKMGILEPGDNAILPAFPSPVNTSTAAPATASR 635 >UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gammaproteobacteria RepID=GSPD_AERHY Length = 678 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 351/645 (54%), Positives = 467/645 (72%), Gaps = 16/645 (2%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 KG + AAL+M AG A +Y A+F NADI +F+ VG++L KTI+I+PSV+G Sbjct: 4 KGKGWRLATVAAALMM--AGSAWATEYSASFKNADIEEFINTVGKNLSKTIIIEPSVRGK 61 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 I+VRS D ++++YYQFFLS+LD+YG++V+ +DNG LKVVRS + KTS + D + PG+ Sbjct: 62 INVRSYDLLNEEQYYQFFLSVLDVYGFAVVPMDNGVLKVVRSKDAKTSAIPVVDETNPGI 121 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 GDE+VTR+VP+ NV R+LAPLLRQ+ D GNVVHY+PSNVL++TGRA+ +N+L+EV+ Sbjct: 122 GDEMVTRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYDPSNVLLITGRAAVVNRLVEVV 181 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPA-LLSAKIVADKRTNSLI 240 +RVD G ++ II L+YASA ++ ++ L + + + + LL+ K+VAD+RTNS++ Sbjct: 182 RRVDKAGDQEVDIIKLKYASAGEMVRLVTNLNKDGNSQGGNTSLLLAPKVVADERTNSVV 241 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG--- 297 +SG KAR RI +++ LD + +GNTRV+YLKY KA ++VEVL GVS ++ +K Sbjct: 242 VSGEPKARARIIQMVRQLDRDLQSQGNTRVFYLKYGKAKDMVEVLKGVSSSIEADKKGGG 301 Query: 298 --NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 +S +AI+ADE TN+LVITA V +L V+A+LDIRRAQVLVEAIIV Sbjct: 302 TATTAGGGASIGGGKLAISADETTNALVITAQPDVMAELEQVVAKLDIRRAQVLVEAIIV 361 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 E+ DG+GLNLGVQWAN N G QFTN G I + A DYK NG T + + Sbjct: 362 EIADGDGLNLGVQWANTNGGGTQFTNAGPGIGSVAIAAKDYKDNGTTTGL---AKLAENF 418 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ-TTS 474 NGMAAGF+ G+W +L+TAL++N K+DIL+TPSIVT+DNK ASFNVGQ+VPV +G+Q +TS Sbjct: 419 NGMAAGFYQGNWAMLVTALSTNTKSDILSTPSIVTMDNKEASFNVGQEVPVQTGTQNSTS 478 Query: 475 GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST--LGPTFNTRTIQ 532 GD F+T+ERKTVGTKL VTPQ+NEGD+VLL IEQEVSSV + T LGPTF+TRT++ Sbjct: 479 GDTTFSTIERKTVGTKLVVTPQINEGDSVLLTIEQEVSSVGKQATGTDGLGPTFDTRTVK 538 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 NAVLVK+GETVVLGGL+D+ +KE+VSKVPLLGDIP++G LFR TS +KRNLMVFIRPT Sbjct: 539 NAVLVKSGETVVLGGLMDEQTKEEVSKVPLLGDIPVLGYLFRSTSNNTSKRNLMVFIRPT 598 Query: 593 IIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 I+RD +VY +S KYT +R +Q + + A VL E Sbjct: 599 ILRDANVYSGISSNKYTLFRAQQLDAVAQEGYATSPDRQ--VLPE 641 >UniRef50_C4L998 General secretion pathway protein D n=2 Tax=Bacteria RepID=C4L998_TOLAT Length = 685 Score = 580 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 338/664 (50%), Positives = 468/664 (70%), Gaps = 33/664 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK K + + A +Y A+F DI++F+ VG++LGKTI++DPSV+G Sbjct: 1 MKQFLKRSLVIGCLCTQLGISPALAAEYSASFKGTDIQEFINTVGKNLGKTIIVDPSVRG 60 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 TI+VRS D ++++YYQFFLS+LD+YG++V+ + NG LKVV++ N KTS +AD +R G Sbjct: 61 TINVRSYDLLNEEQYYQFFLSVLDVYGFAVVPMPNGILKVVKAQNAKTSSIPVADETRTG 120 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 GDE+VTR+VP+ NV R+LAPLLRQ+ D GNVVHYEPSNVL+LTGRA+ +N+L+E+ Sbjct: 121 SGDEMVTRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYEPSNVLLLTGRAAVVNRLVEI 180 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 ++RVD +G E +I L+YASA ++ ++ L + K+ + +L+ K+VAD+RTN+++ Sbjct: 181 VRRVDKVGDENVDVIKLKYASAGEMVRLITAL--TKNDKNALTNVLTPKVVADERTNAVV 238 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 ISG + RQRI ++++ LD E+ +GNTRV+YLKYA A NLVEVL+G S+ +++EK +A Sbjct: 239 ISGENQGRQRIVTMIRQLDREQQTQGNTRVFYLKYANAKNLVEVLSGTSKTIQNEKNSAS 298 Query: 301 KPSSSGAM-------------------DNVAITADEQTNSLVITADQSVQEKLATVIARL 341 ++ +++I ADEQTN+LVITA V ++L +IA+L Sbjct: 299 GSMTATGNTADSASSSGSGSSSSGYNGKDLSIVADEQTNALVITAQPDVMQELERIIAKL 358 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 DIRRAQVLVEAIIVE+QDG+ LN GVQWAN N G QFT TGLP A +++ +G Sbjct: 359 DIRRAQVLVEAIIVEIQDGDTLNFGVQWANTNGGGTQFTATGLPTTTVANAANEWRNDGE 418 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 ++S + S++NG+ AGF+ G+W L+TAL+SN K++ILATPSIVTLDNK A+FNVG Sbjct: 419 LSSTS--TAALSSFNGLVAGFYEGNWAGLVTALSSNTKSNILATPSIVTLDNKEAAFNVG 476 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST 521 Q+VPV++GSQ+++ +V++TVERKTVGTKLKVTPQ+NEGD+VLLE+EQEVSSV SSS++ Sbjct: 477 QEVPVVTGSQSSTAGSVYSTVERKTVGTKLKVTPQINEGDSVLLEVEQEVSSVASSSSTD 536 Query: 522 LGP---------TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 TFNTRT++N+VLVK+GETVVLGGLL + + E V KVPLLGDIP++G L Sbjct: 537 SSSSSSNSSLGSTFNTRTVKNSVLVKSGETVVLGGLLSNNTSESVYKVPLLGDIPILGYL 596 Query: 573 FRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 FRY T K+NLMVFI PTI+RD Y +S KY +R EQ + D + +L + Sbjct: 597 FRYNGTSTTKQNLMVFIHPTILRDPVTYTGVSSSKYNLFRAEQIAQ-DEDADSLSLPVNR 655 Query: 633 PVLD 636 PVL Sbjct: 656 PVLP 659 >UniRef50_P31700 General secretion pathway protein D n=5 Tax=Enterobacteriaceae RepID=GSPD1_ERWCH Length = 712 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 329/699 (47%), Positives = 450/699 (64%), Gaps = 60/699 (8%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 KG+ K L +L+ + ++ A+F DI++F+ V ++L KT++IDP+V+GT Sbjct: 4 KGIKKSWGWLGLTVLLLGSPCGWAAEFSASFKGTDIQEFINTVSKNLNKTVIIDPTVRGT 63 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 ISVRS D + +YYQFFLS+LD+YG+SV+ +DNG LKV+RS + K+S +A++ +PGV Sbjct: 64 ISVRSYDMMDEGQYYQFFLSVLDVYGFSVVPMDNGVLKVIRSKDAKSSSIPLANNEQPGV 123 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 GDELVTR+VPL NV ARDLAPLLRQ+ D G VVHYEPSNVL++TGRA+ I +L++++ Sbjct: 124 GDELVTRVVPLNNVAARDLAPLLRQLNDNAGAGTVVHYEPSNVLLMTGRAAVIKRLVDIV 183 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 VD G + + L YASAED+A+++N L +++ K+ +P+ + A +VAD RTNS+++ Sbjct: 184 NTVDKTGDREMITVSLNYASAEDVAKLVNDL-NKTDEKNALPSTMLANVVADGRTNSVVV 242 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK-------- 293 SG E +++ LD ++ +G T+V YLKYAKA +L+EVL G Sbjct: 243 SGEENTSPCAVEMIRQLDRKQVAQGGTKVIYLKYAKALDLIEVLAGNGTSGNRNSSSTNS 302 Query: 294 -------------------------------------------DEKGNARKPSSSGAMDN 310 ++ + Sbjct: 303 SRPSSTRSSSTLNNSNSSSSGSSSGSGSSSSSSSSSMGFGSAFGSANSSGGRTIVIQGKE 362 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 V + A +QTNSL+IT + L VI +LDIRR QVLVEAII E+QD +GLNLG+QWA Sbjct: 363 VTVRAHDQTNSLIITRPPDIMRDLEQVINQLDIRRPQVLVEAIIAEIQDADGLNLGIQWA 422 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 NK G QFTNTG+PI A G ++ +G +T+A S +NG+ AGF+ G+W +L Sbjct: 423 NKRAGMTQFTNTGIPISTAMIGTDQFRSDGTLTTA--YASALSNFNGITAGFYRGNWSML 480 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT--SGDNVFNTVERKTVG 488 LTAL+S+ KND+LATPSIVTLDN A+FNVGQ+VPVL+GSQTT SGDN+FNTVERKTVG Sbjct: 481 LTALSSDGKNDVLATPSIVTLDNMEATFNVGQEVPVLTGSQTTVGSGDNIFNTVERKTVG 540 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSV---DSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 KL+V PQ+NEGD+VLL+IEQEVSSV + SSNS+LG TFNTRT+ NAV+V ETVV+ Sbjct: 541 IKLRVKPQINEGDSVLLQIEQEVSSVAEGNGSSNSSLGVTFNTRTVNNAVMVTNRETVVV 600 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGLLD + E +KVPLLGDIP +G LFR + +KRNLM+F+RPTIIRD Y+ S Sbjct: 601 GGLLDKTAIETNNKVPLLGDIPWLGSLFRSKTQTMSKRNLMLFLRPTIIRDPQQYQQASI 660 Query: 606 EKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHA 644 KY + EQQQ+ G+ +++ + L + NT+ Sbjct: 661 SKYNSFNNEQQQQ-RGQGNSVLDNNTLRLSGGNTYTFRQ 698 >UniRef50_P31701 General secretion pathway protein D n=27 Tax=Enterobacteriaceae RepID=GSPD_PECCC Length = 650 Score = 571 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 323/635 (50%), Positives = 448/635 (70%), Gaps = 11/635 (1%) Query: 8 TCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 L ++L+ + A + ++ A+F DI++F+ V ++L KT++IDPSV GTI+VRS Sbjct: 1 MLLLSGSVLLMASSLAWSAEFSASFKGTDIQEFINTVSKNLNKTVIIDPSVSGTITVRSY 60 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 D ++++YYQFFLS+LD+YG++VI +DN LK++RS + K++ +A +PG+GDE+VT Sbjct: 61 DMMNEEQYYQFFLSVLDVYGFTVIPMDNNVLKIIRSKDAKSTSMPLATDRQPGIGDEVVT 120 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 R+VP+ NV ARD R++ D G YEP+NV+++TGRA I+ ++ +++RVD Sbjct: 121 RVVPVNNVAARDFGRSSRELNDNAWRGTCGDYEPANVVVMTGRAGVIHAVMTIVERVDQT 180 Query: 188 GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 G I L YAS+ ++ +++N+L ++ KS +P +L+A +VAD+RTNS G + Sbjct: 181 GDRNVTTIPLSYASSTEVVKMVNEL-NKMDEKSALPGMLTANVVADERTNSAAGFGEPNS 239 Query: 248 RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 RQR+ ++K LD +++ +GNT+V YLKYAKA +LVEVLTGV + ++ ++ NA Sbjct: 240 RQRVIDMVKQLDRQQAVQGNTKVIYLKYAKAADLVEVLTGVGDSIQTDQQNA----LPAL 295 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 +++I A EQTNSL++ A + L VIA+LDIRR QVLVEAII EVQD +G+NLGV Sbjct: 296 RKDISIKAHEQTNSLIVNAAPDIMRDLEQVIAQLDIRRPQVLVEAIIAEVQDADGMNLGV 355 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW 427 QWANKN G QFTNTGLPI G ++++G + +A A +NG+AAGF+ G+W Sbjct: 356 QWANKNAGVTQFTNTGLPITTMMAGADQFRRDGTLGTA--ATTALGGFNGIAAGFYQGNW 413 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTV 487 G+L+TAL+SN+KNDILATPSIVTLDN A+FNVGQ+VPVL+GSQTTSGDNVF TVERKTV Sbjct: 414 GMLMTALSSNSKNDILATPSIVTLDNMEATFNVGQEVPVLAGSQTTSGDNVFQTVERKTV 473 Query: 488 GTKLKVTPQVNEGDAVLLEIEQE---VSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVV 544 G KLKV PQ+NEGD+VLLEIEQE V+ SSS++ LG TFNTRT+ NAVLV +G+TVV Sbjct: 474 GIKLKVKPQINEGDSVLLEIEQEVSSVADAASSSSTNLGATFNTRTVNNAVLVSSGDTVV 533 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 +GGLLD + E +KVPLLGDIP++G LFR STE KRNLM+FIRP+IIRD ++S S Sbjct: 534 VGGLLDKSTNESANKVPLLGDIPVLGYLFRSNSTETKKRNLMLFIRPSIIRDRSQFQSAS 593 Query: 605 KEKYTRYRQEQ-QQRIDGKSKALVGSEDLPVLDEN 638 KY + E+ +QR + + DL L E Sbjct: 594 ASKYHSFSAEENKQRNVSNGEGGLLDNDLLRLPEG 628 >UniRef50_A8A4B9 General secretion pathway protein D n=30 Tax=Escherichia RepID=A8A4B9_ECOHS Length = 686 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 286/636 (44%), Positives = 411/636 (64%), Gaps = 25/636 (3%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 AE + ANF + D++ F+E VG +L KTI++ P VQG +S+R+ ++++YYQ FL++ Sbjct: 40 AEEATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNL 99 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSP-GMIADSSRPGVGDELVTRIVPLENVPARDLA 141 L+ GY+V+ ++N LKVV+S+ K P ++ + S GDE+VT++VP+ NV R+LA Sbjct: 100 LEAQGYAVVPMENDVLKVVKSSAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELA 159 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 P+LRQM+D+ GNVV+Y+PSNV++LTGRAS + +L EVI+ VD G +++I L+ AS Sbjct: 160 PILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQSVDHAGNRTEEVIPLDNAS 219 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 A ++A +L L S PA L ++IVAD+RTNS+I+SG R ++ L++ LD E Sbjct: 220 ASEIARVLESLTKNSG--ENQPATLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDSE 277 Query: 262 ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNS 321 GN++V+YLKY+KA +LV+VL VS L K A SG + V+I A + +N+ Sbjct: 278 MERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEEAEGTVGSG-REIVSIAASKHSNA 336 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 L++TA Q + + L +VI +LDIRRAQV VEA+IVEV +G+ +N GVQWA+K+ G QF N Sbjct: 337 LIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAEGSNINFGVQWASKDAGLMQFAN 396 Query: 382 -TGLPIFNAAQGVADYKK--------NGGITSANPAWD--------MFSAYNGMAAGFFN 424 T +PI ++ K G T+ NP + + S ++G A G Sbjct: 397 GTQIPIGTLGAAISQAKPQKGSTVISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVK 456 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-NVFNTVE 483 GDW L+ A+ +++ +++L+TPSI TLDN+ A F VGQDVPVL+GS S + N FNTVE Sbjct: 457 GDWMALVQAVKNDSSSNVLSTPSITTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVE 516 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETV 543 RK VG LKVTPQ+NEG+AV + IEQEVS V+ ++ + F R ++ VL GE + Sbjct: 517 RKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEGQTSLDV--VFGERKLKTTVLANDGELI 574 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 VLGGL+DD + E V+KVPLLGDIPL+G LF+ T+ ++ KRNLMVFIRPTI+RD + Sbjct: 575 VLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADKKEKRNLMVFIRPTILRDGMAADGV 634 Query: 604 SKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENT 639 S+ KY R EQ R D + +L+ PVL Sbjct: 635 SQRKYNYMRAEQIYR-DEQGLSLMPHTAQPVLPAQN 669 >UniRef50_P45779 General secretion pathway protein D n=102 Tax=Proteobacteria RepID=GSPD_VIBCH Length = 674 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 292/658 (44%), Positives = 427/658 (64%), Gaps = 27/658 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK K + LLA L+ NE + A+F DI++F+ IVG++L KTI++DPSV+G Sbjct: 1 MKYWLKKSSWLLAGSLLSTPLAMANE-FSASFKGTDIQEFINIVGRNLEKTIIVDPSVRG 59 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 + VRS DT ++++YY FFLS+L++YG++V+ +DNG LKV++S + KTS + Sbjct: 60 KVDVRSFDTLNEEQYYSFFLSVLEVYGFAVVEMDNGVLKVIKSKDAKTSAIPVLSGEERA 119 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 GDE++T++V ++NV R+L+PLLRQ++D GNVVHY+P+N++++TGRA+ +N+L E+ Sbjct: 120 NGDEVITQVVAVKNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEI 179 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 I+RVD G ++ +++ L ASA ++ I+ L + ++ P L K VAD+RTNS++ Sbjct: 180 IRRVDQAGDKEIEVVELNNASAAEMVRIVEALNKTTDAQNT-PEFLKPKFVADERTNSIL 238 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 ISG K R+R+ L+K LDVE + +GN RV YLKYAKA +LVEVL GVSE L+ EKG + Sbjct: 239 ISGDPKVRERLKRLIKQLDVEMAAKGNNRVVYLKYAKAEDLVEVLKGVSENLQAEKGTGQ 298 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 +S + V I A TNSLV+TA Q + + VI +LDIRRAQVL+EA+IVE+ +G Sbjct: 299 PTTSK--RNEVMIAAHADTNSLVLTAPQDIMNAMLEVIGQLDIRRAQVLIEALIVEMAEG 356 Query: 361 NGLNLGVQWANKNVGAQ-QFTNTGLPIFNAAQGV----------------ADYKKNGGIT 403 +G+NLGVQW + G+ Q+ NTG I N G+ ++ +N T Sbjct: 357 DGINLGVQWGSLESGSVIQYGNTGASIGNVMIGLEEAKDTTQTKAVYDTNNNFLRNETTT 416 Query: 404 SANP---AWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNV 460 + S+ G A GDW L+ A+++++ ++IL++PSI +DN ASF V Sbjct: 417 TKGDYTKLASALSSIQGAAVSIAMGDWTALINAVSNDSSSNILSSPSITVMDNGEASFIV 476 Query: 461 GQDVPVLSGSQTTS-GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN 519 G++VPV++GS S DN F TV+RK VG KLKV PQ+NEG++V L IEQEVS+V +N Sbjct: 477 GEEVPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGNSVQLNIEQEVSNV-LGAN 535 Query: 520 STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE 579 + F R + +V+V+ G+ +VLGGL+D+ + E SKVPLLGDIPL+GQLFR TS++ Sbjct: 536 GAVDVRFAKRQLNTSVMVQDGQMLVLGGLIDERALESESKVPLLGDIPLLGQLFRSTSSQ 595 Query: 580 RAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 K+NLMVFI+PTIIRD +++ KY R EQ R + K L+ +PVL + Sbjct: 596 VEKKNLMVFIKPTIIRDGVTADGITQRKYNYIRAEQLFRAE-KGLRLLDDASVPVLPK 652 >UniRef50_A8GJQ5 General secretion pathway protein D n=6 Tax=Enterobacteriaceae RepID=A8GJQ5_SERP5 Length = 660 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 286/622 (45%), Positives = 405/622 (65%), Gaps = 22/622 (3%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 I + +L+ + + E + ANF DI +F+ + LGKTI+ID +V+G ++VRS Sbjct: 27 IALMAVLVMLLWVSAPVQAEAFSANFKGTDIHEFISTASKALGKTIIIDDAVKGKVTVRS 86 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 + +YYQFFL++LD+YGY+VI++ N LKV+ + + K + + + P GDEL+ Sbjct: 87 YEPLDAGQYYQFFLNVLDVYGYAVISMPNNVLKVIPAKDGKRAA--LNALNTPAEGDELI 144 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 RIVPL N+ A+++APL+RQ D+ +GNVV E N L++TGRA +N L+E+ +D Sbjct: 145 MRIVPLNNIAAKEVAPLMRQFNDSIGIGNVVFLESGNALLITGRADVVNSLVELAHEMDR 204 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 + L++ASA D+ I+ L + + +++ AL K+VAD+RTN+++I+G Sbjct: 205 TEQAGVVSVALQHASATDVVSIVTTLFRDEN-RTKKGALPGMKVVADERTNTVLIAGEPS 263 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 + RI +++ LD E++ +GNT+V LKYAKA L+EVL+GVS L+DEK S Sbjct: 264 LQARIEGIIQQLDQEKASQGNTKVIRLKYAKAQGLLEVLSGVSANLQDEKKTVGNNVS-- 321 Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 M N+ I ADEQTN+L+I A V L VI +LDIRRAQVLVEA+IVE+Q+ +GLNLG Sbjct: 322 VMKNMVIKADEQTNALIINATPDVMSNLEKVIEQLDIRRAQVLVEAVIVEMQNADGLNLG 381 Query: 367 VQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD 426 +QWAN+ G QF N I +G ++F NG+ GF++G+ Sbjct: 382 IQWANRYGGGTQFGNAQAQIAPGFKGGMT--------------EVFKNANGLVTGFYSGN 427 Query: 427 WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKT 486 W LLTA+++ ++N+ILATPSI+TLDN+ A F+VGQDVP+L+GSQTT+ DNVFNTV RKT Sbjct: 428 WAGLLTAISNQSQNNILATPSIMTLDNEDAEFSVGQDVPILTGSQTTNSDNVFNTVARKT 487 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS---TLGPTFNTRTIQNAVLVKTGETV 543 VG KLKV PQ+N+G +VLL+IEQEVSSV +S+ LG TFN RT+ N VLV++GETV Sbjct: 488 VGIKLKVKPQINKGQSVLLQIEQEVSSVAENSSVDKDNLGATFNIRTVNNTVLVESGETV 547 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 V+GGLLD + S VP L IPL+G LFR TS + +KRNL++FIRPT+IR + Y Sbjct: 548 VVGGLLDKSQSDSKSAVPFLERIPLLGALFRSTSHKESKRNLILFIRPTVIRSTEEYAQE 607 Query: 604 SKEKYTRYRQEQQQRIDGKSKA 625 S K R+R Q + K+ A Sbjct: 608 SMRKAARFRSLDAQPLPLKTHA 629 >UniRef50_C4UIB8 General secretion pathway protein D n=4 Tax=Yersinia RepID=C4UIB8_YERRU Length = 674 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 282/608 (46%), Positives = 393/608 (64%), Gaps = 20/608 (3%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 L+ + + +A + + FN+ADI++F+ V + L KTI+IDP VQG ISVRS + Sbjct: 37 VLVTLVFVIYTSNAYSSDFSVKFNDADIKEFINTVSKSLNKTIIIDPKVQGLISVRSYER 96 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 +++YYQFFL++LD++G++V+ + N LKV+ S K+S I GDEL+ RI Sbjct: 97 LDKEKYYQFFLNVLDVHGFTVLEMPNNILKVIPSKRAKSSAPPILMKDDIFNGDELINRI 156 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 +PL+ + A+++ PLLRQ+ D G+V HYEP+N L++TGRA T+ +L+E+I D G Sbjct: 157 IPLKYISAKNVTPLLRQLNDNTDSGSVAHYEPTNSLLITGRAGTVKRLVEIISEFDREGE 216 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 + L YASA ++ +++ +L+ + Q A + K+VAD+RTNS++ISG +R+ Sbjct: 217 SSVDMYKLAYASATEVTKLVTELLRPNVAGKQDTAQM-VKVVADERTNSILISGDPASRK 275 Query: 250 RITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD 309 S++K LD E+ GNT+V YLKYAKA L++VL GVS +KDEK S++ Sbjct: 276 SAESMIKKLDKEQISHGNTKVIYLKYAKAEKLLDVLNGVSVSIKDEKKKVSHISNTIKKS 335 Query: 310 NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW 369 I AD+QTNSL+ITA +V L VI +LDIRRAQVLVEAIIVE QDG G+NLG+QW Sbjct: 336 --MIKADDQTNSLIITASPNVMYDLEKVIEKLDIRRAQVLVEAIIVEAQDGEGINLGIQW 393 Query: 370 ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGV 429 K F Y K+ N + + +G+ GF+ G+W Sbjct: 394 DTKQKKVGGF--------------ISYNKSNLGNIQNGVTSIANGISGLTTGFYRGNWSG 439 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 L TALA+N+ N+ILATPSIVTLDN A F+VGQ+VPVLS QTTS D V+NT+ R++VG Sbjct: 440 LFTALATNSSNEILATPSIVTLDNMDAEFSVGQEVPVLSSQQTTSTDKVYNTISRQSVGI 499 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS---TLGPTFNTRTIQNAVLVKTGETVVLG 546 LKV PQ+N+GD+VLLEI QEVSSV +SN +G TFN R + NAVLVK+GETVV+G Sbjct: 500 MLKVKPQINKGDSVLLEIRQEVSSVAENSNVDKDNIGSTFNKRVVNNAVLVKSGETVVVG 559 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKE 606 GLLD ++K+PLLGDIP++G LFR + KRNL++FI+PTIIR+ D Y S + E Sbjct: 560 GLLDKKVSNVINKIPLLGDIPIIGNLFRQKKEKIEKRNLILFIKPTIIRESDDYLSTTSE 619 Query: 607 KYTRYRQE 614 K + ++ Sbjct: 620 KSKTFNEK 627 >UniRef50_A1JPH4 General secretion pathway protein D n=28 Tax=Yersinia RepID=A1JPH4_YERE8 Length = 648 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 280/606 (46%), Positives = 411/606 (67%), Gaps = 22/606 (3%) Query: 11 LLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTF 70 ++ A + P G+AEN + A+F +ADI++F+ V +++ KTI+IDP VQG +SVRS + Sbjct: 20 VILAAIFPIVGYAEN--FSASFRDADIKEFINTVSKNINKTIIIDPKVQGLVSVRSYELL 77 Query: 71 SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIV 130 +++YYQFFL++LD+YGY+V+ + N LKV+ + K S + +++ P GDEL+ R+ Sbjct: 78 DEEKYYQFFLNVLDVYGYTVVEMPNNILKVIPAKRAKGSVVPLQNNAAPPQGDELINRVF 137 Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 L+++ A++LAPLLRQ+ D G++V+Y+PSNV+++TGRA+ +N+L +I +D G Sbjct: 138 KLKHLLAKNLAPLLRQLNDNSESGSIVNYDPSNVILITGRAAVVNRLYAIISTLDQPGET 197 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 + ++ L +A A D+ +++NQ+I+ + ++ + +A +VAD RTNS+IISG R++ Sbjct: 198 EVELYQLNHAVAADIIKLVNQVINPVNITAKQESFNAATVVADDRTNSVIISGDRHIRKK 257 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 ++K LD ++ G+T+V Y+KYA+A+ L++VL GVS+ + +K +K S + N Sbjct: 258 TLQMIKRLDHQQDSYGSTKVVYMKYAQASKLLDVLNGVSQGSQSDK--TKKNSGKSHIKN 315 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 V+I A +QTN+LVITAD V ++L VI RLD+RRAQVLVEAIIVE Q+G GLNLG+QWA Sbjct: 316 VSIKAYDQTNALVITADPKVMKELDQVIERLDVRRAQVLVEAIIVETQNGEGLNLGIQWA 375 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 NK G F K N T+ N + G+ AGF+ G+W L Sbjct: 376 NKLYGGANFLQ---------------KPNSIQTNNNSGNPIPMMIAGLTAGFYKGNWDGL 420 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 TALA+N+ N+ILATPSIVTLDN A FNVGQ+VPVL+ +QTT+ D V+N++ R++VG Sbjct: 421 FTALATNSNNNILATPSIVTLDNMEAEFNVGQEVPVLTSTQTTATDKVYNSISRQSVGVM 480 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNS---TLGPTFNTRTIQNAVLVKTGETVVLGG 547 LKV PQ+N+GD+VLLEI QEVSSV SS+ LG FN R + NAVLVK+GETVV+GG Sbjct: 481 LKVKPQINKGDSVLLEIRQEVSSVADSSDVNANNLGSVFNKRVVNNAVLVKSGETVVVGG 540 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 LLD + ++KVPLLGDIP +G LFR + + K NL++FIRPTI+R+ Y ++ +K Sbjct: 541 LLDKKINKIINKVPLLGDIPFIGGLFRQSKEKIEKSNLILFIRPTILRETSDYSQVTVDK 600 Query: 608 YTRYRQ 613 Y Y Sbjct: 601 YAEYNN 606 >UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVD5_9GAMM Length = 694 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 244/626 (38%), Positives = 367/626 (58%), Gaps = 20/626 (3%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A A+ E + N +ADI + V + G+ +IDP V+ ++V S+ S E Y+ Sbjct: 33 PAQAADEESFTLNLKDADIEALISTVAKKTGRNFVIDPRVKARVTVISSQAMSGNELYEV 92 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 F SIL ++GY+ + + +K++ N K + + G+GD+LVT+++P+ NV A Sbjct: 93 FQSILQVHGYAAVPAGD-VIKILPEVNAKQGAVPTITNGQ-GMGDDLVTQVIPIRNVAAA 150 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 L P+LR ++ G++ Y SN++++T RAS I++L ++I R+D ++ + I LE Sbjct: 151 QLVPILRPLVPQQ--GHLAAYSGSNIIVITDRASNISRLADIIGRIDRPDNDEIESIQLE 208 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSL 258 +ASA +L I+N L S G ++ + + ++ AD+RTNS++ISG + AR RI L+ S+ Sbjct: 209 HASAPELVRIINSL---SQGGNKGAEVDTPQLAADERTNSILISGSKAARDRIKKLIASM 265 Query: 259 DVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS---SSGAMDNVAITA 315 D + GNT+V YLKYAKA ++ E+L GV+E K A + + + V I A Sbjct: 266 DTPLEQGGNTKVVYLKYAKAEDMAEILKGVNEGQKKAAEAAGGKAAAATVSSDKEVDIQA 325 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 D TNSL+ITA + +V+ +LDIRRAQV VEAIIVEV D LG + N Sbjct: 326 DPGTNSLIITAAPDALRNIESVVRQLDIRRAQVHVEAIIVEVSDTAARELGFSYLFANEN 385 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-----WGVL 430 F N P+ A G NG ++ S NG GF + D + + Sbjct: 386 G--FDNETNPVGGALLGGGGDVINGIAAASTGDGSGASVPNGFTVGFGDRDNSGNVFAGI 443 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG---DNVFNTVERKTV 487 L A+AS+ + ++L+TPSIVTLDN+ A VGQ+VP ++GS TT+ +N F TVER+ V Sbjct: 444 LRAVASDTEANLLSTPSIVTLDNEEAEIVVGQNVPFVTGSYTTASSGANNPFQTVERQDV 503 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGG 547 G LK+TPQ+NEGD + L+IEQE SSV SS ++ N R I+ +V+++ G+ +VLGG Sbjct: 504 GVTLKITPQINEGDVIRLDIEQEASSVVESSVASGQLITNKREIKTSVMIEDGQMLVLGG 563 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 L+DD +++ + KVPLLGDIPL+G+LF+Y + KRNLMVF+ P I+RD + S+EK Sbjct: 564 LIDDQTRKSLFKVPLLGDIPLLGRLFQYRTNSNDKRNLMVFLHPKILRDRLSADATSQEK 623 Query: 608 YTRYRQEQQQRIDGKSKALVGSEDLP 633 Y R Q++ D K V + LP Sbjct: 624 YQFMRGRQREAGDIKPIFNVSTAALP 649 >UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified Gammaproteobacteria RepID=A0Z790_9GAMM Length = 696 Score = 528 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 245/646 (37%), Positives = 357/646 (55%), Gaps = 24/646 (3%) Query: 8 TCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 LL A + ++Y N + DI++ ++ V G TI++DPSV+G I V S+ Sbjct: 33 LIMLLVATSLSSIQTVSAQEYTVNLQDTDIQELIKFVADVTGATIVVDPSVKGKIKVVSS 92 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 ++ E Y FLSILD+ GY+ + N ++V+ + + ++SP + S DE VT Sbjct: 93 RPVNKSELYDLFLSILDVQGYTAVRTGN-VIRVIPNKDARSSPVEVPSSGAMSSNDEYVT 151 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 +++ LEN+ A L P+LR ++ + ++ Y PSN +I++ AS I +++E+I R+D Sbjct: 152 QVIRLENISAAKLIPVLRPLVPQQA--HMAAYAPSNAIIISDIASNIRRIVEIIDRMDRS 209 Query: 188 GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 + Q+I L YA AED+ ++L L +S G +VADKRTNS++++ E Sbjct: 210 AIQGTQVIKLRYAVAEDVVQMLQTLEKQSRGDGAESN-DEVTLVADKRTNSVVVTADELN 268 Query: 248 RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKD-EKGNARKPSSSG 306 QRI L+ LD + GN +V YL+YA A + EVLT V + + + G RKPS++ Sbjct: 269 SQRILDLVTYLDTPLEQSGNVKVVYLEYADAVEVAEVLTRVMQNMSRLDTGGDRKPSTNT 328 Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 N I ADE TN+L+ITAD L VIARLDIRRAQVLVEAIIVE++ G LG Sbjct: 329 ---NSTIEADEGTNALIITADADEMASLEAVIARLDIRRAQVLVEAIIVEMEITEGQELG 385 Query: 367 VQWANKNVGAQQFTNTGLP---------IFNAAQGVADYKKNGGITSANPAWDMFSAYN- 416 +QW + +N I NA G + + G+ A Sbjct: 386 LQWIFADDSGAFGSNVSTSSAQQQRNAAIGNALLGDENSNADIGVRDLAGALSQVPGTTL 445 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 G + V+L AL + +IL+TPS++TLDN+ A VGQ+VP ++GS + +G Sbjct: 446 GWGVVGDDLSMSVILNALETQGNANILSTPSLLTLDNQEAYITVGQNVPFVTGSYSNTGG 505 Query: 477 -----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTI 531 N F T+ER+ VG LKVTPQVNEGD+V+L+I QEVSS+ + N R I Sbjct: 506 ASNVQNPFQTIERENVGITLKVTPQVNEGDSVVLDIVQEVSSISQQLLAAADVITNERKI 565 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 + V+ + G+ VVLGGL+ D ++ VP L DIPL+G+LFR K NL+VFIRP Sbjct: 566 ETKVMAQDGDVVVLGGLVKDDVQDSQQGVPFLQDIPLLGRLFRNDVVSVTKSNLLVFIRP 625 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 TI+RDD+ R + EKY R +Q +R + + +LPVL E Sbjct: 626 TIVRDDESLRGATAEKYRYIRDQQAER-RARGIMFLDDGNLPVLPE 670 >UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0C8_9DELT Length = 690 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 230/645 (35%), Positives = 362/645 (56%), Gaps = 32/645 (4%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 + E NF ADI + V + GKT ++DP+V+G I++ S+ E Y FLSI Sbjct: 42 GQAETITLNFKEADIESVINSVARITGKTFIVDPAVRGNITIVSSQPMRADEVYGVFLSI 101 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV--GDELVTRIVPLENVPARDL 140 L ++ Y+ + N +K++ +A + AD+ P D +VTRI L+ + A L Sbjct: 102 LQVHDYAAVEAGN-VVKIIPAAKAGQDLVITADAEHPLELEEDRIVTRIYRLQYLQADRL 160 Query: 141 APLLRQMMD-AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY 199 P+LR M+ + + + N LI T RA T+ +L+ +++R+D + +I+ LE+ Sbjct: 161 VPILRPMLGTRTGQMSALAVKEGNALIFTERAGTVERLLRIVRRLDQSSGGEMEIVTLEH 220 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD 259 A A D+ ++ ++ + + ++VAD RTNS+++ G R+ + + LD Sbjct: 221 ADARDVVSVIREM----ELGTGRLSAEQLRLVADSRTNSVLLQGDPYHLLRVKATILHLD 276 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 ++ G+T+V +L++AKA +LV +LTG+ + +R+ +V I AD T Sbjct: 277 TPLAKGGDTQVVFLRHAKAEDLVPILTGMGKY-----DGSREERRGQQRQDVDIQADANT 331 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN----VG 375 N+L++T +V + L TVI +LDIRRAQ+++EA+I E+ ++LG+QW + + +G Sbjct: 332 NALIMTGPPAVLQNLQTVIRQLDIRRAQLMIEAVIAEISTARAVDLGIQWFSADADKVIG 391 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 F +G + A G D + + + G +G L+ ALA Sbjct: 392 GTNFPGSGASMSGIAAG--DEGSIAALAGLGGFNMGVFSGSTEILGREFFSFGALVNALA 449 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS----QTTSGDNVFNTVERKTVGTKL 491 + +IL+TPS+VT+DN+ A VGQ+VP L+GS T G + F TVER+ VG KL Sbjct: 450 RDGDTNILSTPSLVTMDNQEAEIIVGQNVPFLTGSFTEGATGVGGSPFQTVERRDVGIKL 509 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDD 551 +V PQV EGD + L+IEQEVSSV + G NTR I +VLV+ G+ +VLGGL+ D Sbjct: 510 RVKPQVTEGDVIRLQIEQEVSSV-ERDDLAAGLVTNTRNINTSVLVEDGKVLVLGGLISD 568 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 +E VSKVPLLGDIPL G LFR+T +ER+KRNLMVF+RP I+RD ++ +S+ +Y Sbjct: 569 DVQETVSKVPLLGDIPLFGALFRHTRSERSKRNLMVFLRPVILRDQEMSSRISQGQYDML 628 Query: 612 RQEQQQRIDGKSKALVGSEDLPVL------DENTFNSHAP-APSS 649 RQ+Q +R D K L+ ++ PVL ++ F+ P +P+S Sbjct: 629 RQQQLER-DSKGVKLMPGQNQPVLLEFEAFEDQHFHPLPPQSPAS 672 >UniRef50_Q0VSG7 General (Type II) secretion pathway protein D n=2 Tax=Alcanivorax RepID=Q0VSG7_ALCBS Length = 710 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 221/666 (33%), Positives = 362/666 (54%), Gaps = 29/666 (4%) Query: 4 LNKITCCLLAALLMPCAGHAE----------NEQYGANFNNADIRQFVEIVGQHLGKTIL 53 L+KI L + +M + HA+ E + N NADI+ F+ V Q GK + Sbjct: 13 LSKIMLLLALSAVMVTSLHAQTTNQVQASDDGESWTVNIRNADIQAFISQVAQMTGKNFV 72 Query: 54 IDPSVQGT-ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGM 112 +DP V+ ++V S + + E Y+ FLS+L ++GY+ +++ + K+V + K S Sbjct: 73 VDPRVRARDVTVVSTKSLTSNEVYELFLSVLQVHGYAAVSVGD-ITKIVPNTTAKQSNLP 131 Query: 113 IADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAS 172 + + G+ELVTR++ +E+ P +L P+LR ++ G++ +N LI++ Sbjct: 132 LVEKGS-SSGEELVTRVIAVESTPVEELVPVLRPLVPQ--YGHLAAVGSANALIISDHLD 188 Query: 173 TINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVA 232 I ++ +I +D +E Q++ L++A A D+ ++L L ++ G+ A +VA Sbjct: 189 NIRRMEAIISSLDSAESEDVQVLKLKHAFAGDMVKMLESLTPQTGGRGGKSAEGGVIVVA 248 Query: 233 DKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 D+RTN LII G RQR+ +++SLD EE+ +V L + A ++ E+L + Sbjct: 249 DERTNRLIIKGDRVTRQRMLQMVRSLDTEETNNSGAKVIRLSHGDAKSMAELLKNFVDGA 308 Query: 293 KDEKGNARKPSSSGAMDN--VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 + ++S A++N V+I ADE N+LV+ A ++ +++ +VI++LD+RRAQ+L+ Sbjct: 309 SVNRAGGDGKTTSVALNNNEVSIQADESLNALVVRAKPAMMKQIQSVISKLDVRRAQILI 368 Query: 351 EAIIVEVQDGNGLNLGVQWANKN----VGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 EA IVE+ G NLG Q+ + VGA F GL + + Q +A +G Sbjct: 369 EAAIVEISGEQGKNLGFQYVGGSNEDGVGAVNFGGNGLSVNSVVQALASDDPSG-----L 423 Query: 407 PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 D +A G + WG L+ AL++++ ++L+TPSI+TLDN+ AS VG++VP Sbjct: 424 SLGDGITAGLGETDSDGDLKWGALIQALSTSSDVNLLSTPSILTLDNEEASIIVGENVPF 483 Query: 467 LSGSQTTSGD---NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG 523 ++G T +G N F T++R+ VG LKVTP V + LE+EQE S+V S+ + Sbjct: 484 VTGQSTNTGSGVSNPFTTIQREDVGLTLKVTPHVAGLSTIRLELEQESSAVKDSAGDAVD 543 Query: 524 PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKR 583 TR +Q+ VL ET+ LGGL+ D + V KVP LGDIP++G LFR TS +R K Sbjct: 544 IVTTTRKLQSTVLADDAETIALGGLIKDDIRVTVRKVPFLGDIPVLGFLFRSTSKDRVKS 603 Query: 584 NLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSH 643 NLMVF++PTI+ ++D +S++KY Q + D V +P ++ F Sbjct: 604 NLMVFLKPTILGNNDRLVEMSRDKYMGLTALQFRLNDDGELEQVEKNPIPQSLDHIFEGR 663 Query: 644 APAPSS 649 P P Sbjct: 664 TPVPQD 669 >UniRef50_Q8VPC8 Hypothetical type II secretion protein n=6 Tax=Enterobacteriaceae RepID=Q8VPC8_ECOLX Length = 616 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 273/603 (45%), Positives = 390/603 (64%), Gaps = 25/603 (4%) Query: 56 PSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSP-GMIA 114 P VQG +S+R+ ++++YYQ FL++L+ GY+V+ ++N LKVV+S+ K P ++ Sbjct: 3 PGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKSSAAKVEPLPLVG 62 Query: 115 DSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTI 174 + S GDE+VT++VP+ NV R+LAP+LRQM+D+ GNVV+Y+PSNV++LTGRAS + Sbjct: 63 EGSDNYAGDEMVTKVVPVRNVSVRELAPILRQMIDSAGSGNVVNYDPSNVIMLTGRASVV 122 Query: 175 NKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADK 234 +L EVI+RVD G +++I L+ ASA ++A +L L S PA L ++IVAD+ Sbjct: 123 ERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSG--ENQPATLKSQIVADE 180 Query: 235 RTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKD 294 RTNS+I+SG R ++ L++ LD E GN++V+YLKY+KA +LV+VL VS L Sbjct: 181 RTNSVIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTA 240 Query: 295 EKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 K A SG + V+I A + +N+L++TA Q + + L +VI +LDIRRAQV VEA+I Sbjct: 241 AKEEAEGTVGSG-REIVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALI 299 Query: 355 VEVQDGNGLNLGVQWANKNVGAQQFTN-TGLPIFNAAQGVADYKK--------NGGITSA 405 VEV +G+ +N GVQWA+K+ G QF N T +PI ++ K G T+ Sbjct: 300 VEVAEGSNINFGVQWASKDAGLMQFANGTQIPIGTLGAAISQAKPQKGSTVISENGATTI 359 Query: 406 NPAWD--------MFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 NP + + S ++G A G GDW L+ A+ +++ +++L+TPSI TLDN+ A Sbjct: 360 NPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSITTLDNQEAF 419 Query: 458 FNVGQDVPVLSGSQTTSGD-NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS 516 F VGQDVPVL+GS S + N FNTVERK VG LKVTPQ+NEG+AV + IEQEVS V+ Sbjct: 420 FMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEG 479 Query: 517 SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYT 576 ++ + F R ++ VL GE +VLGGL+DD + E V+KVPLLGDIPL+G LF+ T Sbjct: 480 QTSLDV--VFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFKST 537 Query: 577 STERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLD 636 + ++ KRNLMVFIRPTI+RD +S+ KY R EQ R D + +L+ PVL Sbjct: 538 ADKKEKRNLMVFIRPTILRDGMAADGVSQRKYNYMRAEQIYR-DEQGLSLMPHTAQPVLP 596 Query: 637 ENT 639 Sbjct: 597 AQN 599 >UniRef50_A1WZM1 General secretion pathway protein D n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZM1_HALHL Length = 670 Score = 511 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 219/652 (33%), Positives = 347/652 (53%), Gaps = 36/652 (5%) Query: 9 CCLLAALLMPCAGHAENEQY-------GANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 +AALL P A+++ + NF +ADI+ + +V + G+ ++DP V+G Sbjct: 25 ILFIAALLAPMLVVADDDAWAERGDGITLNFEDADIKSVIALVSERTGRNFVVDPRVRGE 84 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 ++V S+ + YQ FLS L ++G++ I D G +++V K + + Sbjct: 85 LTVISSQPVDDDQLYQVFLSALQIHGFAAIPAD-GAIRIVPKNIAKRDQTPVPEPGTAES 143 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 G VT+++P+E+V A +L PLLR ++ + + Y +N LI++ A I +L +I Sbjct: 144 GHNFVTQVIPIEHVEASELIPLLRPLISDEA--ELAAYSETNTLIVSETAGNIGRLKRLI 201 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 RVD T +++ LE+ SA ++ E++ + E ++ + AD R+NS+++ Sbjct: 202 DRVDQDTTGVTEVVPLEHGSASEIVEMVEAIEPEKRAGRRLL------LAADDRSNSVLV 255 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 G R + L++ LD E +E V YL+Y+ A ++V +L G++E G AR Sbjct: 256 GGDPARRPSVMELIQRLDAELEDEEGAAVIYLRYSDAESIVPILEGMAE------GMARG 309 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 P V+I E TN+L+I + KL V+ RLD+RRAQVLVEAII EV Sbjct: 310 PE---GETGVSIHDHEATNALIINGPPDLVAKLRGVVNRLDVRRAQVLVEAIIAEVSAER 366 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 LG+QW GA GL F+AA G + A S +G+ AG Sbjct: 367 SQELGIQW-----GALGDQGVGLVNFDAAGGGSVTNIGRAAAGGTDALGNLSLGSGLTAG 421 Query: 422 --FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVF 479 G+ GVLL AL+S + ++IL+TPS++T+DN+ A VGQ+VP ++G + + F Sbjct: 422 AATRGGELGVLLRALSSESDSNILSTPSVMTMDNEEAEIVVGQNVPFVTGREVGDTRD-F 480 Query: 480 NTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKT 539 +++R+ VG +L++ PQ+NEGD++ L+IE+EVS V + + R+I + +V Sbjct: 481 QSIQREDVGVQLRIRPQINEGDSLKLDIEKEVSDVQERGEAEDI-VTSMRSITTSAMVDD 539 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 GE +VLGGL+D+ ++ Q +VP LG IP +G LFRY S+ K+NLMVF+RP II + D Sbjct: 540 GEIMVLGGLMDEQAESQTDRVPGLGSIPGLGWLFRYESSAAQKQNLMVFLRPRIIENRDD 599 Query: 600 YRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENT-FNSHAPAPSSR 650 R L+ KY R Q + + ED+PVL + F P R Sbjct: 600 ARELTSPKYNLIRNRQLAS-RARGMRFLDDEDIPVLSQRRAFMELPPEFGDR 650 >UniRef50_Q0A5Z6 General secretion pathway protein D n=2 Tax=Ectothiorhodospiraceae RepID=Q0A5Z6_ALHEH Length = 673 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 212/632 (33%), Positives = 343/632 (54%), Gaps = 20/632 (3%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+E NF +AD+R+ V +V Q G ++DP V+G +++ S YQ FLS L Sbjct: 33 EDEGITLNFQDADLREVVALVSQETGVNFIVDPRVRGDVTIVSQTPVDADGLYQVFLSAL 92 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 ++G++ + +++ A + + +GD+ VTR++ +++V A +L P+ Sbjct: 93 KIHGFAAVPTPEAV-RIIPRAQARQDRIPSDGDTTRSLGDQAVTRVIRVDHVNAAELVPV 151 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 LR ++ G++ Y P+N LI++ A+ +++L +I RVD + ++I LE+A+A Sbjct: 152 LRPLVPQD--GHLAAYSPANSLIISDTAANVDRLEVLIGRVDRDTEGEIEVIQLEHAAAS 209 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES 263 ++ ++ +L E ++ ++VAD+R NS++I+G + R + +L+ +D E + Sbjct: 210 EVVRMVRELEDEEREGRRL------RVVADERANSVMIAGDRQRRLLVRALIGQIDSEVA 263 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV 323 EG +V YL++A A LV VL G+ L + +G + I A TN+LV Sbjct: 264 AEGTAQVVYLRFADAEELVPVLEGIGTSLLESRGGNDAGGQ-----GLDIRAHSSTNALV 318 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG 383 + V L +V+ RLDIRRAQVLVEA+I EV LGVQW + Sbjct: 319 MNGPADVLRSLRSVLNRLDIRRAQVLVEAVIAEVSQDRVEELGVQWGVLSEDRGVGLINF 378 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF----NGDWGVLLTALASNNK 439 A G+AD + G S D+ +G A G + L+ AL+ ++ Sbjct: 379 GGAAGAGGGIADVIRAAGAISDGSTADLPQVGDGAAIGVGDLRGSTQVAALIRALSGDSA 438 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNE 499 ++IL+TPS++T+DN+ A VGQ+VP ++G F++++R+ VG +L++ PQ+NE Sbjct: 439 SNILSTPSLMTMDNEEAEIVVGQNVPFITGRAIEDSGQAFSSIQRQDVGVQLRIRPQINE 498 Query: 500 GDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSK 559 GD + LEIEQEVSSV + R+++ +V+V+ G+ VVLGGL+DD + + Sbjct: 499 GDTLKLEIEQEVSSVSGGIQGAADLVTDLRSVRTSVMVENGQMVVLGGLIDDQLRTRSQA 558 Query: 560 VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRI 619 VPLLG++P +G+LFRY ++ KRNLMVF+RP IIRD + E Y R R Q QR Sbjct: 559 VPLLGNLPGLGRLFRYDRSQVEKRNLMVFLRPVIIRDTAAQERATAEPYNRMRAMQ-QRF 617 Query: 620 DGKSKALVGSEDLPVLDEN-TFNSHAPAPSSR 650 + L+ + PVL E+ F S PA R Sbjct: 618 RDEGVPLMPDDAAPVLAESEQFMSLPPAYDDR 649 >UniRef50_C7R8G0 General secretion pathway protein D n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8G0_KANKD Length = 708 Score = 508 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 233/681 (34%), Positives = 368/681 (54%), Gaps = 53/681 (7%) Query: 1 MKGL-NKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQ 59 MK L N +T L AA L+ + A E+ N +ADIR+ VE V + GKT+++DP V+ Sbjct: 10 MKQLGNNLTMALCAAGLLLSSFSANAER--LNVRDADIREVVETVAKITGKTMIVDPRVK 67 Query: 60 G-TISVRSNDTF--SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS 116 G +++ + ++ + Y F+S L ++ + I NG +K++ ++ + Sbjct: 68 GLKVTIITAGNVDYTKDQIYNIFVSALQVHKFQAIEA-NGVVKIIPDQQARSEYSPVNVG 126 Query: 117 SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINK 176 + GD +T+++P++NV A+ + +LR ++ S G++ + +N LIL AS + + Sbjct: 127 NLDDYGDRYITQVIPVQNVDAQQIMNVLRPLVSPTS-GHLFAVQGTNTLILHDSASNVRR 185 Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 + E+I R D E+ ++I LE+ASA ++ IL L + S + Q + + VAD+RT Sbjct: 186 ITEIIDRTDKANDEEIEVIPLEHASASEIVRILESL-NRSGRQPQGNEVQEPRYVADERT 244 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 NS+++S ++ R R+ +L+ SLD + GNT+ +LKYAK+ + EVL+G+ E + E+ Sbjct: 245 NSILLSANDRQRVRLRALIGSLDRPLNSMGNTKTVFLKYAKSEQVAEVLSGIGEIKQKEE 304 Query: 297 GNARKPSSSGAMDNV-------AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 A +GA V +I + E+TN+LV+TA + + +VI LDIRR QV Sbjct: 305 AAASGRGGAGAGGGVATQRSLYSIQSHEETNALVLTAPPDIMREFDSVIRALDIRRKQVH 364 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQ-------QFTNTGLPIFNAAQGVADYKKNGG- 401 VEAIIVE+ D LG+QW G+ FTNTG I A G + Sbjct: 365 VEAIIVEISDNKAKELGIQWLFSPEGSNTTPGGVVNFTNTGPGIGQVAAGAISARGTEEE 424 Query: 402 ITSANPAWDMFSAYNGMAAGFFNG-------------------------DWGVLLTALAS 436 + + +P + G NG WG + AL Sbjct: 425 VFTRDPETGEITGTETRRVGGDNGAALAEVLGGMQGLGLGVAKIRPDGFSWGAFIRALEG 484 Query: 437 NNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-NVFNTVERKTVGTKLKVTP 495 ++ L+ PS+ TLDN A F GQ++P+++GS + N F VERK VG LK+TP Sbjct: 485 VTDSNTLSRPSVTTLDNVEAIFKSGQEIPIITGSTLGDNNSNPFQNVERKDVGVMLKLTP 544 Query: 496 QVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 Q+NEG+ V L+IEQEVSS+ S+N + N R ++ +VLV G VVLGGL+DD ++ Sbjct: 545 QINEGNYVRLDIEQEVSSIAGSTNVDV--VTNKREVKTSVLVPDGGMVVLGGLIDDDIQQ 602 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 KVP+LGDIP++G F+ T++ KRNLM+FI PT+++DD R LS KY+ R +Q Sbjct: 603 SSQKVPILGDIPVLGHAFKSQRTQKIKRNLMIFIHPTVLKDDAELRELSSAKYSYIRAQQ 662 Query: 616 QQRIDGKSKALVGSEDLPVLD 636 ++ + +L+ E+ VL Sbjct: 663 IEQA-NRGISLMPEEETEVLP 682 >UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF18_CELJU Length = 681 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 228/673 (33%), Positives = 373/673 (55%), Gaps = 36/673 (5%) Query: 1 MKGLNKITCCLLAALLM---PCAGHAENEQ-YGANFNNADIRQFVEIVGQHLGKTILIDP 56 KGL T + + P + +A+ EQ + NFN+ DI++ ++ + GKTI+IDP Sbjct: 12 FKGLLLATLVAAGSAVWAQDPTSTNAQGEQTWTVNFNDTDIQEVIKFIAGATGKTIIIDP 71 Query: 57 SVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS 116 V+G I V ++ + +E Y+ FL+ LD+YG++ + N +++V + + + P + Sbjct: 72 KVRGPIKVINSKPLTSKEVYELFLASLDVYGFTAVESGN-IVRIVANRDARNLPIPTEKN 130 Query: 117 SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINK 176 D +T+++PL+N A + LR ++ G++ YEPSN LI+T + + + Sbjct: 131 VNVRD-DLYITQVIPLKNTSAAKILAALRPLVPQ--YGHLTTYEPSNALIITDTRANVAR 187 Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 + E++ ++D IG + +I L YA+A ++ +L QL + IVADKR Sbjct: 188 MNELVVQLDKIGITQTDVIPLRYANATEVVNMLTQLEKPDPNRG--MTTSPPVIVADKRI 245 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 N+++ISG + +RQR+ L+ LD +++ N RV YL+YAKA ++ +VLTG+ + + Sbjct: 246 NAVVISGDDMSRQRLKFLIDDLDRPQTKNANVRVVYLRYAKAEDVAKVLTGMMQSFTQSR 305 Query: 297 GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 + ++ + AD TNS+++TAD + + +++ LDIRRAQVLVEAII E Sbjct: 306 ---QAEGAAPNTQQPGVQADPATNSVLLTADVDTMDTMLSIVDSLDIRRAQVLVEAIIAE 362 Query: 357 VQDGNGLNLGVQWANK----NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW-DM 411 V D +G LG++W + GA + G + +A KN + A ++ Sbjct: 363 VSDEDGKELGIEWMYRDDKYGFGASANGSRGSIGGIGSAVLAASDKNASQDDKDTALANL 422 Query: 412 FSAYNGMAAGFFN-------GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464 S +G++ F D+ +L + S++K +IL+TPS++T DN A +VG+ V Sbjct: 423 ASGLSGLSGQMFGFGRLGERTDFLAVLKLMQSSSKTNILSTPSLLTTDNNQAVISVGRQV 482 Query: 465 PVLSGSQTTSGDN-------VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS 517 P +GS + G F T+ R+ VG KL+VTP +NEGD+++L+I+QEVSS+ S Sbjct: 483 PFRTGSYSAVGTGGNSTIGSPFTTINREDVGLKLEVTPHINEGDSIVLDIKQEVSSL-SD 541 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 +S G N R IQ +L GET+VLGGL+ D + +VP+LG IP++GQLFR + Sbjct: 542 VSSEDGIITNKREIQTQILSSDGETIVLGGLITDEVQTGERRVPVLGSIPVLGQLFRSQT 601 Query: 578 TERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 + ++K NL+VFIR T++RDD V + EKY R+EQ + + LV ++PVL E Sbjct: 602 SSKSKTNLLVFIRATVVRDDKVLTGSTAEKYRLIREEQLNHVRNRGL-LVRKSEIPVLPE 660 Query: 638 NTFNSHAPAPSSR 650 + S P R Sbjct: 661 --WESRQPVIDLR 671 >UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax=Alteromonadales RepID=Q21EP4_SACD2 Length = 666 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 226/649 (34%), Positives = 354/649 (54%), Gaps = 20/649 (3%) Query: 3 GLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTI 62 GL IT A+ A Y NF + DI + ++ V GKTI+IDP V+G I Sbjct: 9 GLATITIIFSCAVQAQPAARGSQPSYTVNFKDTDIHEVIKFVADATGKTIVIDPRVKGRI 68 Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG 122 V S T ++ E ++ FL+IL+++ ++ + + + ++++ + ++SP + D S G Sbjct: 69 KVISQTTVNKDELFELFLTILEVHDFTAVQVGD-VVRILPLKDARSSPVPVQDESDVGNR 127 Query: 123 ---DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 + VT ++ L+N+ A + P+LR ++ S ++ Y SNV++++ A I +L + Sbjct: 128 ASTNGYVTEVIQLKNIEAAKVLPVLRPLVPQHS--HLSSYTESNVIVVSDTAPNIARLRD 185 Query: 180 VIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 VI+R+D +++ L+YA AEDL L +L + K + +IVADKR NS+ Sbjct: 186 VIERIDTAALPTTEVVPLKYADAEDLVATLTKL--DRGEKQSSTPVNQLQIVADKRNNSV 243 Query: 240 IISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA 299 ++SG + R+R L++ LD + GN RV YL YA A ++ L+ V + ++ + Sbjct: 244 LLSGEDIQRKRAKDLIRKLDRPPVQMGNVRVVYLNYANAKDVAATLSKVVQNMQQMQPGG 303 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 + G D + ADE TN+L++T + L T++ RLDI+RAQVLVEAIIV++ Sbjct: 304 K---DKGGKDGATVEADEDTNALLLTGSGDMLNSLLTIVERLDIKRAQVLVEAIIVDINV 360 Query: 360 GNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN--- 416 LGVQW N F + + G N A + Sbjct: 361 DANKELGVQWMFSNENNGTFGGSSQGDGSLGSLATGTLGGGTDALTNLASGIAGNTGQLL 420 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG- 475 G+A ++ LL+AL +++ +IL+TPS+VT+DN+ AS +VGQ VP +GS +T+G Sbjct: 421 GVAGNNGGENFIALLSALQTSSDANILSTPSLVTMDNQEASISVGQSVPFRTGSYSTTGT 480 Query: 476 ----DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTI 531 N F T++R+ VG L VTP VNEG+ +LL+I QEVSS+ SS + N I Sbjct: 481 TGSVGNPFTTIQREDVGITLTVTPHVNEGNKILLDISQEVSSISSSVAGSADLITNQSKI 540 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 + +L G+ V+LGGL+ + ++ ++VPLLG IPL+G LF+Y ST+ K+NLMVFIR Sbjct: 541 ETQLLANDGQIVILGGLIQEDVQDGDTRVPLLGSIPLLGHLFKYQSTKFLKKNLMVFIRV 600 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTF 640 I+ DD+ + EKY R +QQ R K L+ + LPVL E T Sbjct: 601 KIVTDDEAMYGATAEKYQYIR-DQQMRQHDKGLNLMSRKILPVLPELTP 648 >UniRef50_Q1N1M8 Type II secretory pathway, component PulD n=1 Tax=Bermanella marisrubri RepID=Q1N1M8_9GAMM Length = 640 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 203/616 (32%), Positives = 338/616 (54%), Gaps = 20/616 (3%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK + LL + A A++E + N +ADI+ F+ V G + +IDP V+G Sbjct: 12 MKIRTYLAIALLLLSMPFQALAADDETWKVNLKDADIKAFITQVANITGYSFVIDPRVKG 71 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 +++ S+ +Q E Y+ F S+L ++G+S I + +K+V+ + K GM + P Sbjct: 72 KVTIVSDTPMTQNEVYEMFQSVLAVHGFSAIPAGH-IIKIVQQNDTKQEGGMPTTVNAPQ 130 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 ++++T+++ +++ PA DL P+LR M+ G++ + +N LI+T AS + +L ++ Sbjct: 131 -SEQMITQVIQIKDTPALDLVPILRPMVAK--YGHLAGVKSANALIVTDHASNVRRLEKI 187 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISE-----SHGKSQMPALLSAKIVADKR 235 I+R+D G + +++ LE A D+ +IL L + + ++VAD+R Sbjct: 188 IQRLDGSGVSELEVVQLEEAWVGDIVDILTNLDPDKVSEGGKAREASGVAGRIRVVADER 247 Query: 236 TNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE 295 N LII G + AR+R+ L+ +LD G V L++A + L E+L + +KD+ Sbjct: 248 ANRLIIQGEQSARERVKELIATLDRPSKFSGKASVIRLQHADSEELAELLKNLMGDVKDD 307 Query: 296 KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 KG ++ S V+I AD N+LV+ A+ SV ++ ++ LD+RRAQVL+EA IV Sbjct: 308 KGKSQAGGS------VSIHADTGLNALVVRAEPSVMSEIKEIVTELDVRRAQVLIEAAIV 361 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 EV +GVQ A + + NA ++ GI + PA Sbjct: 362 EVTGQVDDRVGVQTAALDQETGETPLVATDFANAGTSISQLIT--GIATGQPAISSGLTL 419 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG 475 G+ + ++ L+ AL S + ++L+TPSI+T+DN A VGQ+VP ++GS +++ Sbjct: 420 GGVGQN-GDTEFAFLVQALESVSNANLLSTPSIMTMDNHEAEIIVGQNVPFVTGSTSSTS 478 Query: 476 DN-VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF-NTRTIQN 533 ++ F T++R+ +GT LKVTP V +G V L +EQ SV ++ N R+IQ Sbjct: 479 NSNPFTTIKREDIGTTLKVTPHVQDGKFVRLSVEQSTESVAPTAVEGQADLITNKRSIQT 538 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 +L + GE V+LGGL+ D +E SKVP LGDIP++G LFR TS R K+NL+VF++PT+ Sbjct: 539 QILAENGEIVMLGGLIRDAVQESESKVPFLGDIPIIGWLFRSTSESRVKQNLIVFLKPTV 598 Query: 594 IRDDDVYRSLSKEKYT 609 + D + + + KY Sbjct: 599 VLDKADNKKILRRKYD 614 >UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P193_AZOSE Length = 719 Score = 491 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 209/676 (30%), Positives = 322/676 (47%), Gaps = 57/676 (8%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 A A+++ NF NA+I ++ +G+ GK LIDP V+GT+++ +N S+ YQ Sbjct: 23 AVAAQDDTVSLNFANAEIDAVIKAIGKISGKNFLIDPRVKGTLNIVTNTPVSRDLSYQIL 82 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 LS L L GY+ + G K+V A+ K + G GD LVT++ + N A Sbjct: 83 LSALRLQGYTAVE-GPGVTKIVPEADAKLHGVPVGKEVLRGRGDSLVTQVFAMRNESATQ 141 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY 199 + ++R ++ + V + +NVL++T A + ++ +I VDV ++ L + Sbjct: 142 MLAVVRPLVSPNN--TVTAFPSNNVLVVTDYADNVARIARIIDSVDVPQG-DVHVLELRH 198 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSA----KIVADKRTNSLIISGPEKAR-QRITSL 254 A+A DLA LN+L+++ G A ++V D RTNSL++ +R + L Sbjct: 199 AAAVDLAATLNRLMNDGTGNGSAANTADASQRVQVVPDARTNSLLVRTENPSRISALRQL 258 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD----- 309 + SLD GN V YLK A+AT + + L G +S + Sbjct: 259 VASLDRP-GAGGNIHVVYLKNAEATKVAQTLNGALAGDGSAPSATDSIASPSPLGASTPD 317 Query: 310 --------------------------NVAITADEQTNSLVITADQSVQEKLATVIARLDI 343 I AD N+L+I A +++ L VI LD Sbjct: 318 RMTTQGAGLTPATYRPSPESGNASDRGGMIQADPVNNALIIVAPEAIYRNLRHVIDLLDR 377 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT 403 RRAQV +EA+I E+ G+QW + N ++T N + Sbjct: 378 RRAQVYIEALIAEISTERAAEFGIQWQSANTPGAGSSSTFFGGTNFGGAGQNIIGAAQNI 437 Query: 404 SANPAWDMFSAYNGMAAGFFNG------DWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 + F G NG + +L L ++++ +IL+TPS+VTLDN+ A Sbjct: 438 GSVGKGMNFLLGGGTVKVPINGQMVEVFNLSLLARFLETDSRTNILSTPSLVTLDNEGAK 497 Query: 458 FNVGQDVPVLSGSQTTSGD-----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 VG+++P ++G T +G N F T+ER+ VG L+V PQ++EG A+ L+I QE S Sbjct: 498 IVVGRNLPFITGQYTNTGGGTTPANPFQTIERRDVGLTLEVRPQISEGGAIRLDIYQEAS 557 Query: 513 SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 SV + + + GPT N R+IQ+ VLV G + LGGL++D KVPLLGDIP G L Sbjct: 558 SVVPTLDDSAGPTTNKRSIQSTVLVDDGAIIALGGLVEDDYSSGEEKVPLLGDIPFAGSL 617 Query: 573 FRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 FRY + R K NL+VF+RP I+RD D Y +++ +Y +Q+ + L G Sbjct: 618 FRYDTRRRTKTNLVVFLRPVILRDRDSYSTITNARYDYIIGQQRNVAPPNAL-LHGERRP 676 Query: 633 PVLDENTFNSHAPAPS 648 P L PAP+ Sbjct: 677 PELPA----PGTPAPA 688 >UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P591_9PROT Length = 690 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 215/655 (32%), Positives = 325/655 (49%), Gaps = 26/655 (3%) Query: 3 GLNKITCCLLAALLMPC--AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 L + LA + A E+E NF NADI++ + + Q K L+DP V+G Sbjct: 6 ALRSLLIFSLAIFVAAPCHAEKKEDELVTLNFVNADIQEVIRAISQISKKNFLVDPRVKG 65 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 TI++ S S Y LS L L GY+ + NG +++ A K DS G Sbjct: 66 TINIVSATPVSPALGYDILLSALRLQGYAAVES-NGVTQIIPEAEAKQH----IDSLAQG 120 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 GD+LVT + L+ A L ++R M+ SV VV Y SN L++T AS++ ++ ++ Sbjct: 121 RGDKLVTHVFVLKYESASQLVNVVRPMISPNSV--VVAYPASNALVVTDYASSVRRIDKL 178 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHG-KSQMPALLSAKIVADKRTNSL 239 I +D + +I +++ASA DLA I+N+L+ E+ +S ++AD RTN L Sbjct: 179 IDSIDQPSADAPIVIPVKHASAVDLANIINRLMPEAAASQSGGDDNQRFVLLADSRTNGL 238 Query: 240 II-SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG- 297 ++ SG R+ L+ LD + GN V LK A AT L + L V Sbjct: 239 LLRSGNPGRIARVKELVTKLDSAANTPGNIHVVQLKNADATKLAQTLRSVLSGETAPPAA 298 Query: 298 --NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 + + I AD +N+L++TA + + L +VI +LD+RR Q+ VEA+IV Sbjct: 299 PSTVPQSAGVATSSTGMIQADPSSNALIVTASEPIYNNLRSVIDKLDVRRPQIFVEALIV 358 Query: 356 EVQDGNGLNLGVQWAN----KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM 411 EV GVQW N GA T + + D N + + Sbjct: 359 EVTADKAAEFGVQWQNLVGASKSGAHIIGGTNFGSVASGNNIIDAANNLSTVNQGLNIGI 418 Query: 412 FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 + + + G+L AL ++ +IL+ P+++TLDN+ A VGQ+VP ++G Sbjct: 419 VNGTTTIPGVGTVLNLGMLARALETDTNANILSEPNLMTLDNEEAKIVVGQNVPFITGQY 478 Query: 472 TTSGD----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTF 526 +G F T+ERK VG LK+ PQ+ +G V L+I QEVSSV SS+S+ G Sbjct: 479 AQTGSATTATPFQTIERKDVGLTLKIKPQIMQGGTVKLQIYQEVSSVLPSSSSSTSGLIT 538 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 N R+I++ +LV + VVLGGL+ D + SK PLLGDIP++G LFRY + + K NLM Sbjct: 539 NKRSIESNILVDDNQIVVLGGLIQDSVNDVQSKTPLLGDIPILGSLFRYDTRQHTKTNLM 598 Query: 587 VFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSE---DLPVLDEN 638 VFIRP I+ + Y+ L+ Y + ++++ L + LP L E Sbjct: 599 VFIRPYIMYQQNSYQQLTDNFYEQMNKKREDARMPDHWILPNDDKDKSLPPLPEK 653 >UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Marinomonas sp. MED121 RepID=A3YCA1_9GAMM Length = 616 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 196/635 (30%), Positives = 331/635 (52%), Gaps = 22/635 (3%) Query: 3 GLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTI 62 + + L+ +L M A + + N ADI F+ V + ++ ++DP V+G + Sbjct: 4 VVRRQLLKLIVSLCMLIPLLAIGKTWQVNLQQADISIFIRQVAEMTDRSFIVDPRVKGKV 63 Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG 122 +V SN + + ++ FLS+L ++GY+V+ GF K++ K G+ D S G Sbjct: 64 TVISNASLDEDAVFRLFLSVLTVHGYAVLESPEGF-KILPQNIAK-QGGLNFDPSGGAPG 121 Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 + +VTR++ ++N A +L P+LR ++ G++ N LI++ A I L ++++ Sbjct: 122 ELMVTRVLAIKNAVAAELVPILRPLIPQ--YGHLAAVPTMNALIISDHADNIRSLEDLVE 179 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 R+D + +I L++A A D+ +L +L + + GK + + IVAD+RTN LI+ Sbjct: 180 RLDSTIEGEMAVIPLKHAWAGDVITLLQELTTTTTGKGARSSDV-TTIVADERTNRLILK 238 Query: 243 GPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 G +I L+ LD+ + + L+YA AT + ++L GV ++ ++GNA Sbjct: 239 GKPGELNQIKDLIIKLDIPAEKTSRLQYIPLQYADATKVADLLKGVVGDIEKKEGNAPTL 298 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 ++ I ADE N+L++ ++ V ++ +V+ ++D+ RAQVL+EA+IVE+ + Sbjct: 299 ETN-------IQADEDLNALLVNSEPGVMSEIYSVLKQIDVPRAQVLIEAVIVEITVTDE 351 Query: 363 LNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 LGVQW +G +G +A + ++AN +A G Sbjct: 352 EELGVQWL---IGGSDEIISGTNFTSAGSSANTIASSINSSTANTLATGGTAILG----- 403 Query: 423 FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTV 482 + ++G ++ AL S +++L+TP I+TLDN+ A VG+ P +G + D+ F T Sbjct: 404 -DTNFGAIIQALQSKTNSNLLSTPKILTLDNQEARILVGETRPFQTGEYSEDSDSTFVTT 462 Query: 483 ERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGET 542 R+ VG LKVTP +N G+ V +E+ Q V S S S LG R ++ V+ +T Sbjct: 463 SREDVGLTLKVTPHINSGNEVKMEVFQTVES-ASDEASDLGTITTVREVETVVIAGDRQT 521 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRS 602 +VLGGL+ D E KVP LGD+P VG LFR +S K+NL+VFIRPTIIR Sbjct: 522 IVLGGLIQDNITESKQKVPFLGDLPFVGGLFRSSSFSIDKKNLLVFIRPTIIRGKAKADQ 581 Query: 603 LSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 ++ +Y +R + Q + L G + + DE Sbjct: 582 ITNTQYQGFRAVEIQMSAPRDGGLEGLFEPELSDE 616 >UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Proteobacteria RepID=A9IRR4_BORPD Length = 862 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 207/700 (29%), Positives = 321/700 (45%), Gaps = 90/700 (12%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 ++ NF + DI + + + L+DP V+G +++ S + Sbjct: 27 AQARPADQHVSLNFVDTDIPAVLRALSLFTQRNYLVDPRVKGKLTLVSERPVDRDTALTM 86 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTS--------------PGMIADSSRPGVGDE 124 L + G++++ +D G +VV A+ K P +AD +R G E Sbjct: 87 LAGALRMQGFAIVEVD-GVTRVVPEADAKLQGSAVVADAARGAAGPMPMADFARGARGSE 145 Query: 125 LVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 +VTR+ L+ A +L P+LR ++ + + Y +N L++T A + ++ VI +V Sbjct: 146 VVTRVFSLKYENAANLLPVLRPLVPPNNP--INAYPGNNTLVVTDYADNLERIARVIAKV 203 Query: 185 DVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 DV ++ ++Y A DLA + QL+ G + +VAD RTNS+++ Sbjct: 204 DVPSAIDTDVVPVKYGVASDLASLATQLLDAQGGDTAQ----RIAMVADPRTNSVLVRAG 259 Query: 245 EKARQRI-TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK---------- 293 AR R+ L++ LD E++ GN V YL+ A+A+ + EVL G+ Sbjct: 260 SPARTRLARDLIRKLDSEQARPGNLHVVYLRNAQASRMAEVLGGLLASQALNGAGREGGG 319 Query: 294 ----------DEKGNARKPSSSGAM----------------------------------- 308 G A P +SG Sbjct: 320 AGGSAMGVAGRAGGRASAPRTSGTPVGMASGSSGSSGGGAFNQQPIERDDDGAGDAVSYS 379 Query: 309 -DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 + AD TN+L+I+A + + L VI +LD RRAQVLVE++IVEV G+ Sbjct: 380 GGGATVQADPSTNTLIISAPEPLYRSLREVIDQLDQRRAQVLVESLIVEVSQEKAAEFGI 439 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY----NGMAAGFF 423 QW GA +G G G T+ + + G Sbjct: 440 QWMT---GAGSLDGSGFIGGTNLGGSGIGSAGTGATTLDALGRGLTLGLVKGTVDVLGNQ 496 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG----DNVF 479 + VL AL ++ + +IL+TP+++TLDN+ AS VG+ VP ++G TSG +N F Sbjct: 497 VINLNVLARALQNSGEANILSTPNLLTLDNEPASILVGKTVPFVTGQYVTSGSAGSNNPF 556 Query: 480 NTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS-TLGPTFNTRTIQNAVLVK 538 T+ER+ +G KL + PQ++EG AV L+I QEVSS+D +S+S T G N R I +VLV Sbjct: 557 QTIEREDIGLKLNIRPQISEGGAVKLDIYQEVSSIDEASSSETTGLVTNKRAIDTSVLVD 616 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 G+ +VLGGLL+D S VP L IPL+G LFRY +R K NLMVF+RP ++RD Sbjct: 617 DGQIIVLGGLLEDRVTSTTSAVPGLSSIPLLGALFRYDKRQRTKSNLMVFLRPFVVRDAR 676 Query: 599 VYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDEN 638 +++ +Y R+ Q Q GK L + + Sbjct: 677 DSANVTLNRYDYMRRAQSQAQPGKHWLLPDVQAPLLPPAR 716 >UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH25_DESMR Length = 685 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 182/625 (29%), Positives = 311/625 (49%), Gaps = 17/625 (2%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 A + NF+ D+R F++ + Q GK +ID +V+G ++V S S E Y+ Sbjct: 55 VAAPDDTAKTISINFDGVDLRAFIKYISQVTGKNFVIDDAVKGNVTVISPKPLSPAEVYK 114 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRS--ANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 F S+L++ GY+ + +N F+K+V + + ++ P + + D +VT+I+PL+N+ Sbjct: 115 VFESVLEVNGYTALPTEN-FVKIVPAKTSRARSMPVIDGRETVTNPADAVVTQILPLQNI 173 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ-QI 194 A +L L ++ G + + +N LI+T I ++I ++ ++D+ + + Sbjct: 174 RAGELRKTLAPLVSPD--GMLADFADTNALIVTDYRPNIQRIIGIVDQLDLSSAKATLHL 231 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 HL++ASA +++ L +L+S+S K + +V ++RTN++I+ + ++ L Sbjct: 232 FHLKHASAAKISQKLEKLLSQSAAK-EGGGQTKISVVPEERTNAVIVLAEPQYVAQVKGL 290 Query: 255 LKSLDVEES-EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAI 313 L LDV E+GN VY L++A A NL +VL + K G+A K + Sbjct: 291 LAKLDVPNPMEQGNLHVYKLQHADAENLSKVLNELFTKGSTATGDAAKAQAPTVSGGFNF 350 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 AD+ TNSL++TA + V+ +LD R QV VEA+I+EV ++ GV N Sbjct: 351 VADKSTNSLLVTAAPEDFAFVDQVVKKLDAPRKQVYVEALIMEVSTDKSVSFGVNLNVAN 410 Query: 374 ----VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGV 429 +G ++ N A + Y +G A+ + Sbjct: 411 KQSGLGDGKYGGLLFASSNPAGYESLYNSSGAFVPPAGGSLGGLAFPVKIGEVIYSNLQA 470 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNTVERKTV 487 ++ A S+N +I+ATP ++TLDN+ A+ V ++ P L+ ++ D + + K V Sbjct: 471 MINASKSDNSFNIIATPQLMTLDNEEATITVAENRPYLTSQDVGQSTTDRPYQRFDYKDV 530 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSS---SNSTLGPTFNTRTIQNAVLVKTGETVV 544 GT LKVTPQ+NEGD++ L+++QE S +D + L PT R + ++ + GET+V Sbjct: 531 GTTLKVTPQINEGDSIKLKVKQETSRIDETVTKETGALQPTTRKRVTETTIMCRNGETIV 590 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 L GL+ E SKVP LGD+P+VG LF+ S + NL VFI P I L Sbjct: 591 LSGLIGKSRAEGNSKVPGLGDVPVVGWLFKNKSVADERTNLYVFITPRITAPGVDSDRLL 650 Query: 605 KEKYTRYRQEQQQRIDGKSKALVGS 629 K ++ + + SK + + Sbjct: 651 HAKKMEIERQIEFNEEELSKPIRKA 675 >UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDL7_ACIJO Length = 785 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 211/684 (30%), Positives = 335/684 (48%), Gaps = 53/684 (7%) Query: 8 TCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 + A LL + + + + N +AD+ F+ V GK +DP V+G ++V SN Sbjct: 11 ALTIAAPLLAMVSTASYAQTWKINLRDADLTAFINEVADITGKNFAVDPRVRGNVTVISN 70 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 ++QE Y FL +L++ G I K+V +NVK+S G+ D GD++VT Sbjct: 71 KALNKQEVYDLFLGVLNVNGVVAIPSGRTI-KIVPDSNVKSS-GIPYDVRHRATGDQVVT 128 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 R++ LEN A DL P LR +M ++ +N LI++ RAS I +L +I+ +D Sbjct: 129 RVIWLENTNANDLIPALRPLMPQ--FAHLSAVNGTNALIVSDRASNIYQLETIIRNLDGT 186 Query: 188 GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 G + + L+ + AE++ +L + K + + +I+AD RTN +I+ G Sbjct: 187 GQNDIEAVSLQSSQAEEMIGLLESMSGTGSIKDLKGSRI--RIIADNRTNRIILKGDTAT 244 Query: 248 RQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS--- 303 R+RI +++ LDV +E G +V+ LKYA A +L E+L G+ + + Sbjct: 245 RKRIRQMIEMLDVPAAERLGGLKVFRLKYASAKSLSEILQGLVSGQAVNSSQSNDSNNNS 304 Query: 304 ------------------------------------SSGAMDNVAITADEQTNSLVITAD 327 +S + V+I AD N+LV+ AD Sbjct: 305 NSSYNQSNSASEGSSSQISTPSINLNSQSNRNQNNITSFNSNGVSIIADSSQNALVVKAD 364 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA----NKNVGAQQFTNTG 383 + ++ + I +LD RR QVL+EA I+EV+ + LGVQWA + VG F N G Sbjct: 365 PQLMREIESAIQQLDTRRQQVLIEATILEVEGNDADQLGVQWAMGDLSSGVGIINFDNIG 424 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 + + A G ++ + + +G ++ AL SN K+++L Sbjct: 425 SSLKSIAANYLTGGGAGAASAIGAGGSLILGDYKEGSDGSRQLYGAMIQALKSNTKSNLL 484 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVTPQVNEG 500 +TPSIVT+DN+ A VG++VP ++GS +T+ N + T+ERK VG LKV P + EG Sbjct: 485 STPSIVTMDNEEAYIVVGENVPFVTGSVSTTSSGTANPYTTIERKDVGVTLKVVPHIGEG 544 Query: 501 DAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 + LEIEQEVS V ++ + R I+ +VL + G T+VLGGL+ D + + Sbjct: 545 GTIRLEIEQEVSDVKANKGQAQDLVTSKRAIKTSVLAEHGNTIVLGGLISDNTSYSRQSI 604 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRID 620 P LG IP +G+LFR KRNL+VFI PTI+ D + R LS+++Y++ Q Sbjct: 605 PGLGAIPGLGRLFRSDGKSDQKRNLLVFIHPTIVGDGESARRLSQQRYSQLYSLQLAMDK 664 Query: 621 GKSKALVGSEDLPVLDENTFNSHA 644 S A + V + + Sbjct: 665 DGSFAKLPENVDDVFQQRLPVTPT 688 >UniRef50_C7HZF2 General secretion pathway protein D n=1 Tax=Thiomonas intermedia K12 RepID=C7HZF2_THIIN Length = 884 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 215/706 (30%), Positives = 324/706 (45%), Gaps = 83/706 (11%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 A + N N NADI V+ V G+ ++DP V+G ++++ Q+ +Q Sbjct: 51 AKRSANGDLTINLVNADIASAVQAVAAATGRNFIVDPRVKGQVTIQFEKPVPPQKVFQAL 110 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMI----ADSSRPGVGDELVTRIVPLENV 135 L+ L L G++V+ D G +VV A+ K G + A S PG GD++VT+I L N Sbjct: 111 LTQLRLAGFAVVEHD-GVFQVVPEADAKLQSGPVGVGLAPSRIPGRGDQVVTQIFQLRNA 169 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII 195 A L P+LR ++ + NV N L++T A + ++ +I +DV + ++ Sbjct: 170 SASSLLPVLRPLISPNNTINV--SPSGNALVVTDYADNLKRIARIIAALDVPTGTEVTVV 227 Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPAL------------LSAKIVADKRTNSLIISG 243 L YA A DLA L +LI S P + A I+ + +NSLI+ Sbjct: 228 PLTYAVASDLAPTLQKLIDMQTVTSSGPGTPGVQAAVAGSGAMRAVILPETASNSLIVRA 287 Query: 244 PEKA-RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 A I +++ LD ++++ N V YL+ A A +L L GV + Sbjct: 288 TNGAQLAEIEQMIRRLDRPQNDQDNIHVVYLRNANAADLARTLRGVLAAQGTGSAAGGQS 347 Query: 303 ---------------------------------------------SSSGAMDNVAITADE 317 S+ + AD Sbjct: 348 QVKPQGGSQSMSGGSNNSNSSSYGSSGATSPGLGQAPEFAATSSDSTVTLPQGGTVYADN 407 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ 377 N+L+I A Q V +L VI RLD+RRAQV VEA+I EV LG+QW A Sbjct: 408 SLNALIINAPQPVYMQLRRVIERLDVRRAQVYVEALIAEVDANKAAQLGIQWQAIAGSAG 467 Query: 378 Q------FTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN-----GD 426 +N G N A G + A + NG+ G + Sbjct: 468 NQNAIIGGSNYGTGGSNIINLQAAISGGGSSAATALASGSLAIPNGLNIGILHNVAGMAT 527 Query: 427 WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD----NVFNTV 482 G+L L + + +IL+ P+++TLDN+ A VGQ+VP ++G +G F T+ Sbjct: 528 LGLLANFLQTQDGANILSAPNLMTLDNEEAKIVVGQNVPFVTGQYAQTGSSATVTPFQTI 587 Query: 483 ERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGET 542 ERK VG LKV PQ+ G A+ +++ QEVSS+ S++N+ G N R+IQ AVLV G+T Sbjct: 588 ERKDVGLTLKVRPQITAGGAIKMDVYQEVSSISSTTNAA-GIITNKRSIQTAVLVNDGQT 646 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRS 602 +VLGGL+ D + SK+P LGDIP +G LFR S K +LMVF+RP ++R +D + Sbjct: 647 IVLGGLMQDNVSQNNSKIPGLGDIPGLGALFRSNSRTAQKTDLMVFLRPIVVRTEDQGNA 706 Query: 603 LSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNS-HAPAP 647 LS+++Y R Q R ++ + PVL ++ AP P Sbjct: 707 LSQQRYDTMRGMQ-DRAQLPAQFGMPEMPGPVLPSLQGDTGAAPTP 751 >UniRef50_A4BES0 Type II secretory pathway, component PulD n=1 Tax=Reinekea blandensis MED297 RepID=A4BES0_9GAMM Length = 653 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 199/646 (30%), Positives = 351/646 (54%), Gaps = 28/646 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 M G+ + LL + A+++ Y N ADI + +++V + G+T +IDP V+G Sbjct: 3 MSGMFRNVILACCLLLTTVSVFADDQTYTLNMQEADITEVIDLVAKVTGRTFIIDPRVRG 62 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 ++V S+ ++ + Y+ FL+ L++YG+S + + K++ +++K S G+ ++ Sbjct: 63 KVTVISDKEMTKSQIYETFLATLEVYGFSAVQAGD-VTKIIGQSDIK-SAGIEVETQGGR 120 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 VG+E++TR+ P++N A +L P+LR M+ + G++ +NVLI+ RA+ I++L E+ Sbjct: 121 VGEEIITRVFPIQNASAMELVPILRPMV--ANYGHLAGVPSANVLIVADRATNIDRLSEI 178 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQL----ISESHGKSQMPALLSAKIVADKRT 236 + +D G+E+ ++++L++A + +L ++ ++ + ++ + + +V D+R+ Sbjct: 179 VYLLDKAGSEEIEVVNLQHAWVGAMITLLERISPTAVAAGNQGARSGSNRTVTLVGDERS 238 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 N +I+ G +ARQ+I L++ LD E + +V +L A A + E+L G++ + Sbjct: 239 NRIIVKGETEARQQIIELIQKLDTPSQENASYKVIFLNNADAVKMAEILKGIASTSQGAS 298 Query: 297 GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 G PS +++ ADE+ N+L++ A+ S ++L ++I++LDI R QVL+EA IVE Sbjct: 299 GQNEPPSQP-----ISVLADEEQNALIVRAEPSDMKELESIISQLDIPREQVLIEAAIVE 353 Query: 357 VQDGNGLNLGVQWA-NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 V + LGVQWA N V + A V + ++ G + A Sbjct: 354 VTGNDTDTLGVQWATNPEVVQDGVPFLSVSSEVAGASVGNLAQSVGQGISQAGGSPLGAL 413 Query: 416 NGMAAGFFNG---------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 + AG F G D+GV + AL S + + L+TPSI+TLDN A VG VP Sbjct: 414 TSVPAGTFMGLADPFGNRVDFGVAIQALESASNTNFLSTPSILTLDNSEAVITVGNSVPF 473 Query: 467 LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN-STLGPT 525 +G + DN F T+ER+ VGT L V P + + + LE++Q V SVD + + Sbjct: 474 KTGG-SGDEDNPF-TIERQDVGTTLTVIPHIQQNGTIRLEVDQIVESVDETVSYDASDVV 531 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 R + VLV +GET+VLGGL+ D E S+VP+LG IP++G LF+ ST + K NL Sbjct: 532 TKKRQVTTQVLVNSGETIVLGGLIQDQVSELESRVPVLGYIPIIGHLFKSKSTLKTKTNL 591 Query: 586 MVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED 631 ++ ++P++I D+ + + + + Q I +S S D Sbjct: 592 LIILKPSVIEDN--MDEIRANRLNGVWELRIQTIKDESSIQQPSVD 635 >UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 Tax=Acinetobacter RepID=B2I1Y0_ACIBC Length = 758 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 218/657 (33%), Positives = 335/657 (50%), Gaps = 63/657 (9%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY 75 + + A + + N +AD+ F+ V GK +DP V+G ++V SN ++ E Sbjct: 20 IATVSSSAYAQTWKINLRDADLTAFINEVADITGKNFAVDPRVRGNVTVISNKPLNKDEV 79 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 Y FL +L++ G I N K+V +NVK S G+ DS GD++VTR++ LEN Sbjct: 80 YDLFLGVLNVNGVVAIPSGNTI-KLVPDSNVKNS-GIPYDSRNRVRGDQIVTRVIWLENT 137 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII 195 DL P LR +M ++ +N LI++ RA+ I +L +I+ +D G + I Sbjct: 138 NPNDLIPALRPLMPQ--FAHMAAIAGTNALIVSDRAANIYQLENIIRNLDGTGQNDIEAI 195 Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLL 255 L+ + AE++ L + + G S+ + +I+AD RTN ++I G + R+RI ++ Sbjct: 196 TLQSSQAEEIITQLEAM--SATGASKDFSGARIRIIADNRTNRILIKGDPQTRKRIRHMI 253 Query: 256 KSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGVSEKL---------------------- 292 + LDV ++ G +V+ LKYA A NL E+L G+ Sbjct: 254 EMLDVPSADRLGGLKVFRLKYASAKNLSEILQGLVTGQAVSSSNNSNNSSNSSNPINSLI 313 Query: 293 -KDEKGNARKPSSSGA-------------------------MDNVAITADEQTNSLVITA 326 ++ + S+GA + V+I AD NSLV+ A Sbjct: 314 GNNQNSGSNTSGSNGASISTPAINLNGNSNSSNQNNITSFNQNGVSIIADNAQNSLVVKA 373 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA----NKNVGAQQFTNT 382 D + ++ + I +LD+RR QVL+EA I+EV + LG+QWA + +G F+N Sbjct: 374 DPQLMREIESAIQQLDVRRQQVLIEAAIIEVSGDDADQLGIQWALGDLSSGIGLLSFSNV 433 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD--WGVLLTALASNNKN 440 G + + A G G ++ + + F N +G L+ AL +N K+ Sbjct: 434 GASLSSIAAGYLSGGSAGAASAIANGANKGNGATLGLGNFDNSRKAYGALIQALKTNTKS 493 Query: 441 DILATPSIVTLDNKLASFNVGQDVPVLSGSQTT--SGDNVFNTVERKTVGTKLKVTPQVN 498 ++L+TPSIVT+DN+ A VGQ+VP ++GS TT +G N + TVERK VG LKV P + Sbjct: 494 NLLSTPSIVTMDNEEAYIVVGQNVPFVTGSVTTNSTGINPYTTVERKDVGVTLKVVPHIG 553 Query: 499 EGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS 558 EG V LE+EQEVS+V S + R I+ AVL + G+TVVLGGL+ D + Sbjct: 554 EGGTVRLEVEQEVSAVQDSRGQAADLVTSKRAIKTAVLAEHGQTVVLGGLVSDDTSLSRQ 613 Query: 559 KVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 +P L IP VG+LFR + KRNL+VFI PTI+ D + R LS+++Y + Q Sbjct: 614 GIPGLSSIPYVGRLFRSDNRSNVKRNLLVFIHPTIVGDANDVRRLSQQRYNQLYSLQ 670 >UniRef50_D0KWK8 General secretion pathway protein D n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWK8_HALNC Length = 725 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 233/653 (35%), Positives = 350/653 (53%), Gaps = 33/653 (5%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 +++ ++ NF + DI +E V + GK ++DP V+ ++V S S Q+ Y FLS Sbjct: 51 NSDTDKVTLNFRDMDIGALIEAVSKVTGKNFIVDPRVKARVTVISAKPMSPQKLYDVFLS 110 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 IL + G++ + +K+V N ++ + S VGD++VT +V L VPA L Sbjct: 111 ILQVNGFAAVPAG-AVIKIVPEINARSDAQPVNPGSS-AVGDQMVTEVVHLRYVPAAPLL 168 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 +LRQ+M + +V Y SN L++T RA I++L +++ +VD +II L+ AS Sbjct: 169 TVLRQIMPQQAALSV--YPDSNSLVITDRAGNIDRLKKILAKVDQPAVGDVEIIRLKRAS 226 Query: 202 AEDLAEILNQLISESHGKSQMPALLS-----------AKIVADKRTNSLIISGPEKARQR 250 A+ + L L S G A + AD RTNS+++SG +R + Sbjct: 227 ADSVVSTLKALFGASGGGGAKGAPVPGGGAGGNFSSVPAFAADDRTNSVLLSGDAVSRAK 286 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP---SSSGA 307 + +++ +LD+ ++ GNTRV+ LKYA A +LV+VL G+ A +++ Sbjct: 287 MRAIILNLDMPQTNYGNTRVFRLKYANAEDLVDVLKGIVSTNGATSTGATATKEATTNPD 346 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 + + I AD+ N+LV+TA S + + +VI +LDIRR QVLVEAII EV +G LG Sbjct: 347 NNQLEIAADKSLNALVVTASPSRMQTVESVIDQLDIRRKQVLVEAIIAEVSNGVTKKLGT 406 Query: 368 QW----ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 Q+ + V T GL A+ + G + G + Sbjct: 407 QFLVGGGSGTVPIGISTFNGLLSSVASSAAQAGTGSVGSAIGLGLAGALGDGGNIGVGRY 466 Query: 424 N---GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG----- 475 D+ +L++ALA N+ N+IL+TPS++TLDN+ AS VGQ++P+++GS +G Sbjct: 467 GQGGADFALLVSALAGNSGNNILSTPSLLTLDNQEASIVVGQNIPIVTGSYAQTGSATSP 526 Query: 476 DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAV 535 N F T+ R+ +G KLKVTP ++ V L+IEQEVSS+DS++ S+ G N R + V Sbjct: 527 TNPFQTITREDIGVKLKVTPTISPDGTVRLKIEQEVSSLDSAAQSSAGLITNKRNVTTTV 586 Query: 536 LVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 V G+ VVLGGL+DD + VP LGDIP++G LFRY S KRNLM+FIRP I+ Sbjct: 587 QVDDGDVVVLGGLIDDSTNSNQQSVPGLGDIPILGNLFRYRSASTNKRNLMIFIRPLIVG 646 Query: 596 DDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVL-DENTFNSHAPAP 647 D S+E+Y R RQ QQ D +S LV D VL E F + P P Sbjct: 647 DGGKLSEFSREQYNRIRQSQQDTFDKRS--LVNPSDWSVLSPEQNFQRNLPIP 697 >UniRef50_B3R7X2 General Secretory Pathway protein D, type II secretion system n=16 Tax=cellular organisms RepID=B3R7X2_CUPTR Length = 831 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 206/716 (28%), Positives = 327/716 (45%), Gaps = 90/716 (12%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 P A +Q NF NAD+ ++ VGQ GK +IDP V+GT+++ + S+ + Q Sbjct: 53 PDVTPANRDQVVLNFVNADLDSVIKAVGQATGKNFVIDPRVKGTVNLVTEQPVSRAQALQ 112 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPA 137 S+L + GY+++ NGF KVV A+ K P GD++VT++ L A Sbjct: 113 TLGSVLRMQGYAMVES-NGFTKVVPEADAKLQGSPTVIGGSPSRGDQVVTQVFRLNYESA 171 Query: 138 RDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHL 197 +L P+LR M+ + + Y +N L++T A + ++ +I VD + + +++ L Sbjct: 172 NNLVPVLRPMIAPNN--TITAYPANNTLVITDYADNLRRIARIIAAVDAPASGEVELVPL 229 Query: 198 EYASAEDLAEILNQLISESHGKSQ-------MPALLSAKIVADKRTNSLIISGPEK---- 246 ++A A D A +L +L+ + + + A L +VA+ R+NSL+I + Sbjct: 230 KHALASDTAGVLQRLLDPAAAGAAGGGGAAAVDASLRTSVVAEPRSNSLMIRATSRARLQ 289 Query: 247 -ARQRITSL--------------LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEK 291 ARQ I L LK+ D + + + AT+ Sbjct: 290 QARQLIEKLDQPYARPGNIWVVPLKNADAVKLAATLRAIVAADSSFATSTQPGAQAGGIG 349 Query: 292 LKDEKGNARKPSSSGAMDNVA--------------------------------------- 312 N P+ Sbjct: 350 GAAGMTNVSTPTGGQFTGGATTTQTGMRSGSGTGGGTGGAYGNSAFAASFGTTTQPTTGG 409 Query: 313 -ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 I AD TNSL+ITA + V L VI LD RRAQV +E++IVEV LG+QW Sbjct: 410 IIQADPSTNSLIITASEPVYRNLRGVIDDLDARRAQVYIESMIVEVTATQASELGIQWQG 469 Query: 372 KNVGAQQFTNT--GLPIFNAAQGVADYKKNGGITSANPAWDMFSA------YNGMAAGFF 423 + N G Q + + G + +N + + +A G+ G Sbjct: 470 LISSSSGNNNVFAGTNFGTGGQNILNLTLAGALADSNRSAGIVAAQQLVPDIGGLNLGIV 529 Query: 424 NG--DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD----N 477 N G LL AL +N ++L+TP+++TL+N+ A +GQ++P+ +GS +G Sbjct: 530 NRAMGLGALLRALGTNGSVNLLSTPNLITLENEEAKILIGQNIPITTGSYAQTGGAASVT 589 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSSNSTLGPTFNTRTIQNAVL 536 F T +RK VG L+V PQ+ +G V ++I QE S+V +++N GPT N R+I+ VL Sbjct: 590 PFQTFDRKDVGITLRVKPQITDGGLVKMQIFQESSNVVQATANLIQGPTTNVRSIETNVL 649 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 V G+ +VLGGL++D + V KVPLLGDIP +G LFRY + R+K NL+VF+RP ++R Sbjct: 650 VDDGQIIVLGGLIEDNYGDGVQKVPLLGDIPWIGGLFRYENKNRSKTNLLVFLRPYVMRT 709 Query: 597 DDVYRSLSKEKYTRYRQEQQQR------IDGKSKALVGSEDLPVLDENTFNSHAPA 646 L+ ++Y R +QQ + + L+ D P ++ P Sbjct: 710 AGATDRLTADRYDYMRAQQQGFVSPNIMVRDTNTPLLPPADAPTTPFVNPRTNGPV 765 >UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gammaproteobacteria RepID=B4SL34_STRM5 Length = 793 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 207/714 (28%), Positives = 321/714 (44%), Gaps = 77/714 (10%) Query: 1 MKGLNKITCCLLAALLM--------PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTI 52 M+ + + C AL++ A A +E N DI + + + G+ Sbjct: 1 MRVMRSLACSTALALVVGMAHVPAPVLAQDARDEPVQLNLVETDIGGVLRMAARFTGRQF 60 Query: 53 LIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGM 112 L+DP V G ++V S+ S+ + YQ L L + G++V+ + G +VV A+ K + Sbjct: 61 LVDPRVTGKMTVVSDGPVSRTQAYQLLLGALRMRGFAVVE-NGGVSRVVPQADAKL---L 116 Query: 113 IADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAS 172 G G E+ TR L A L +LR M+ + + +N L++T A Sbjct: 117 GGRVGAGGAGGEVATRTFALRYENAAALVAVLRPMISPDNP--ITANPGNNTLVITDYAD 174 Query: 173 TINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVA 232 + ++ VI VD ++ L+ A D+A ++ L+ + ++A Sbjct: 175 NLERIARVIASVDTPAGMDTDVVKLQQGIAVDVAAMVAPLLDAQGAEPNQ----KVVVMA 230 Query: 233 DKRTNSLIISGPEKARQRI-TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEK 291 D R+NS+++ R R+ L++ LD + E GN V YL+ A+A L VL GV Sbjct: 231 DPRSNSVLLRSSSPGRTRLARQLVEKLDKAQDESGNLHVVYLRNAQANQLAGVLRGVVAG 290 Query: 292 LKDEKGNAR----------------------------------------------KPSSS 305 D S+ Sbjct: 291 QSDAPAMGSNEGITPLPGDANRSTPAQPSQPQQAKTGGNALESQRLDPNRRDPIDAGSTG 350 Query: 306 GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 + + +++ AD TN+L+I+A + V L VI +LD RRAQVLVE++IVEV + L Sbjct: 351 FSQNGISVQADVATNTLLISAPEPVYRNLRRVIDQLDQRRAQVLVESLIVEVNQTDAAEL 410 Query: 366 GVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 GVQW N T+ G + A + + + Sbjct: 411 GVQWMLGNGRTFGGTHFGGTNGGSGLNTAARTTLDVLPKDGLKIGVIDGTINLPGVGQIL 470 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG----DNVFNT 481 + L AL S +IL+TP+++TLDN+ AS VGQ VP +SG T G +N F T Sbjct: 471 NMKALANALQSKGGANILSTPNLMTLDNEAASIMVGQTVPFVSGRYVTDGGGGSNNPFQT 530 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD-SSSNSTLGPTFNTRTIQNAVLVKTG 540 + R+ VG KL+V PQ++EG V L+I QEVSS+D S+NST+G N R + +VL+ G Sbjct: 531 IVREDVGLKLRVRPQISEGGTVKLDIYQEVSSIDAQSANSTVGIITNKRALDTSVLLDDG 590 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 + +VLGGLL+D VP LG IP++G LFR + +RAK NLMVF+RP ++RD Sbjct: 591 QIMVLGGLLEDSVSHGRDAVPGLGKIPVLGALFRSDTRKRAKTNLMVFLRPHVVRDPAAG 650 Query: 601 RSLSKEKYTRYRQE-------QQQRIDGKSKALVGSEDLPVLDENTFNSHAPAP 647 + L++++Y R Q + S + +DL VL + P Sbjct: 651 QRLTRDRYDYMRNAQAGTQPVQSWALPALSAPQLPPQDLSVLGQGNARDGQGQP 704 >UniRef50_A1U289 General secretion pathway protein D n=4 Tax=Gammaproteobacteria RepID=A1U289_MARAV Length = 649 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 197/596 (33%), Positives = 322/596 (54%), Gaps = 12/596 (2%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + E + N +ADIR FV V G + ++DP V+G ++V S+ ++ E Y FL++L Sbjct: 27 QEETWRLNLKDADIRAFVTQVADITGYSFVVDPRVKGKVTVLSSAPMNKDEIYDLFLAVL 86 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 +++G++ I + +K+V+ + K S + + ++L+TR++ ++N A +L P+ Sbjct: 87 NVHGFTAIPGEE-VVKIVQQVDAKQSAENL-NRFPQTPSEQLITRVIQIDNANALELVPI 144 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 LR ++ G++ +N LI++ AS I ++ ++++ +D + ++I L+ A Sbjct: 145 LRPLVAK--YGHLAGVAAANALIVSDHASNIARIEQIVRELDSPSKYEVEVIQLQEAWVG 202 Query: 204 DLAEILNQLISESHGK-SQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE 262 D+ +L +L E G+ A + AD+R+N LI+ G E R ++ L+ LD Sbjct: 203 DMVTLLQELAPEELGRAGGENAARKYSVTADERSNRLILRGDETFRDKMRGLILQLDQPS 262 Query: 263 SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV--AITADEQTN 320 + G T+V L++A A L E+L GV ++ E S ++ ADE N Sbjct: 263 ASGGTTKVIRLRHADAKTLTEILKGVMGEVVKEGSAGGSSGGSAGNPGSSFSVFADEGLN 322 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 +LV+ D S+ ++ ++A+LD+RRAQV++EA IVE+ D G LGVQ A + A F Sbjct: 323 ALVVRGDPSLMQEAEQIVAQLDVRRAQVMIEAAIVEISDELGDQLGVQLAAGDESAGSFP 382 Query: 381 NTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG-DWGVLLTALASNNK 439 G + + V G + G +G WG+L+ AL+S++ Sbjct: 383 VLGTNLTSGQGMVGLNSVIGALVGDTIPQLAGGLTVGAGQRDEDGVTWGLLIQALSSSSA 442 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVTPQ 496 ++L+TPSI+TLDN+ + VGQ+VP +G T +GD N F T+ER+ VG LKVTP Sbjct: 443 ANLLSTPSIITLDNQESEIIVGQNVPFRTGQSTVTGDGTTNPFTTIERRDVGLSLKVTPT 502 Query: 497 VNEGDAVLLEIEQEVSSVDSSS-NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 ++ V L +EQ + ++S + N R I+ VL GETVVLGGL+ D + Sbjct: 503 ISADGLVRLVVEQTTEDISTTSVDGASDLITNKREIKTTVLADDGETVVLGGLIKDDYQV 562 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 SKVPLLGDIP++G+LF S R KRNL+VF+RPTI+ + + EK+ R Sbjct: 563 SKSKVPLLGDIPVLGRLFSSESETRVKRNLLVFLRPTIMLGKADAVAATTEKFNRL 618 >UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBE1_9GAMM Length = 630 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 213/647 (32%), Positives = 348/647 (53%), Gaps = 37/647 (5%) Query: 5 NKITCCLLAALLMPCAGHA-ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 I C L+AA L+ + A E+ N +ADIR ++ V + GK I++ V+G ++ Sbjct: 10 RLIQCLLIAATLLSLSQLAYSAEKLTMNMRDADIRALIQWVADNTGKNIVVHRDVKGKVT 69 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 V S + + E YQ FLS+L ++ Y+VI LK+V + + A SS Sbjct: 70 VLSPEPLTVDEAYQVFLSVLQVHEYAVIETPEA-LKIVPRSIAASGALPYAASSTTA--- 125 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 ++V I+ +EN A +A LR +M +V + Y +N L+L AS I+ E+I++ Sbjct: 126 DMVVSIIKIENTSALQMAEALRPLMSKDAV--IKPYLATNALVLADHASNISSAQELIQQ 183 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 +D + +I L++A AE + + L+ L+ SQ + L+ I ++R+NS++++G Sbjct: 184 LDKTSDSEIDVIVLQHADAESILQSLSTLLPSG---SQQASALNITISINERSNSILLAG 240 Query: 244 PEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS 303 R++ +L+K LD +GNT V YL Y A+ +V +L +++ ++ + + Sbjct: 241 DPAKRKQFRNLIKKLDKPLDGQGNTDVVYLHYVDASEIVPILENLAKSIQSNQKDT---- 296 Query: 304 SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGL 363 N++I A + N+LVI A S+ + ++I++LDIRRAQV+VEAI+VEV+ Sbjct: 297 ----DSNISIEASKSANALVINAPPSILTTMKSIISQLDIRRAQVMVEAILVEVRGELAS 352 Query: 364 NLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 ++GV W + L A +D FSA G G+F Sbjct: 353 DVGVTWITDPDNSIVGAVNTLGNLPLANAPSDGSAL-----------PFSAGRGFTFGYF 401 Query: 424 NG-DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS---GDNVF 479 NG D L AL++ +IL+TP+IV +DN+ AS VGQ+VP ++G T+S ++ F Sbjct: 402 NGGDLQAALRALSATQNANILSTPTIVAIDNEEASLLVGQNVPFITGQATSSASSTNDPF 461 Query: 480 NTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKT 539 T+ER+ +GT L VTP++N+GD++ LEI Q+ ++ S + N R I L++ Sbjct: 462 TTIERQDIGTSLVVTPRINQGDSITLEIHQKTETIAPSIDIASDIVTNKREIITKALIRD 521 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 + +V+GGL++D E + KVPLLGDIP +G LF T K NLMVFI PTI++DD+ Sbjct: 522 DQVLVIGGLINDEETEIIEKVPLLGDIPYLGSLFSSKGTSHTKTNLMVFIHPTILKDDEQ 581 Query: 600 YRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPA 646 L++ +Y + QQQ D + K + +D VL + F++ P+ Sbjct: 582 IARLTQTRYQFMQNLQQQVKDNEWK--IDPDDSAVLKD--FSTFTPS 624 >UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pseudomonas RepID=GSPD_PSEAE Length = 658 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 225/629 (35%), Positives = 351/629 (55%), Gaps = 33/629 (5%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 AG+ + + N +ADIR+F++ + + G+T ++DP V+G +SV S S E Y Sbjct: 42 FVPAGNQQEAHWTINLKDADIREFIDQISEITGETFVVDPRVKGQVSVVSKAQLSLSEVY 101 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 Q FLS++ +G++V+ + ++V +A KT G D L TR++ ++ P Sbjct: 102 QLFLSVMSTHGFTVVAQGDQA-RIVPNAEAKTEAG-----GGQSAPDRLETRVIQVQQSP 155 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 +L PL+R ++ G++ +N LI++ R++ I ++ +VI+++D G+ +I+ Sbjct: 156 VSELIPLIRPLVPQ--YGHLAAVPSANALIISDRSANIARIEDVIRQLDQKGSHDYSVIN 213 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 L Y D AE+LN +S K A+++AD RTN LII GP +AR ++ L + Sbjct: 214 LRYGWVMDAAEVLNNAMSRGQAKGAAG----AQVIADARTNRLIILGPPQARAKLVQLAQ 269 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITAD 316 SLD + NTRV L++ A L E L +SE +K+ G + + G N+ I AD Sbjct: 270 SLDTPTARSANTRVIRLRHNDAKTLAETLGQISEGMKNNGGQGGEQTGGGRPSNILIRAD 329 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG- 375 E TN+LV+ AD L ++ +LD+ RAQVLVEA IVE+ +GVQWA G Sbjct: 330 ESTNALVLLADPDTVNALEDIVRQLDVPRAQVLVEAAIVEISGDIQDAVGVQWAINKGGM 389 Query: 376 ---AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 F NTGL I Q + K I +G G + +G L+T Sbjct: 390 GGTKTNFANTGLSIGTLLQSLESNKAPESI------------PDGAIVGIGSSSFGALVT 437 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGT 489 AL++N K+++L+TPS++TLDN+ A VGQ+VP +GS TT+ + N F TVERK +G Sbjct: 438 ALSANTKSNLLSTPSLLTLDNQKAEILVGQNVPFQTGSYTTNSEGSSNPFTTVERKDIGV 497 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSV--DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGG 547 LKVTP +N+G A+ LEIEQE+S++ ++ + + R+I++ +L + G+ +V+GG Sbjct: 498 SLKVTPHINDGAALRLEIEQEISALLPNAQQRNNTDLITSKRSIKSTILAENGQVIVIGG 557 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 L+ D + SKVPLLGDIPL+G+LFR T KRNLMVF+RPT++RD +LS +K Sbjct: 558 LIQDDVSQAESKVPLLGDIPLLGRLFRSTKDTHTKRNLMVFLRPTVVRDSAGLAALSGKK 617 Query: 608 YTRYRQEQQQRIDGKSKALVGSEDLPVLD 636 Y+ R R +++ + + D Sbjct: 618 YSDIRVIDGTRGPEGRPSILPTNANQLFD 646 >UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE34_DESAA Length = 716 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 197/653 (30%), Positives = 333/653 (50%), Gaps = 36/653 (5%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + +F +A+I +FV+ + + GK ++D V+G I++ S + E YQ FLS+L Sbjct: 64 DEGLIQIDFEDAEIAEFVKYISEVTGKNFVLDSKVRGKITIMSPKKVTPDEAYQVFLSVL 123 Query: 84 DLYGYSVITLDNGFLKVVRSANVKT-SPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 ++YGY+ + + KVV + + KT +P R D++VT+++ ++ D+ Sbjct: 124 EVYGYATVKVG-SLTKVVPAPDAKTKNPETRLFDHRISETDKVVTQLISMDFAQVEDVVK 182 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG-TEKQQIIHLEYAS 201 L + M+ GS+ +V Y P+N LI+T S I +L++++K +DV G E+ ++ L +A Sbjct: 183 LFQPMVSKGSL--LVAYSPTNTLIVTDVESNIQRLVKILKAIDVHGVGEELTVVPLTHAG 240 Query: 202 AEDLAEILNQLISESHGKSQMPALLS--------------AKIVADKRTNSLIISGPEKA 247 A ++A++ L S P + + KIVAD+RTNSLII + Sbjct: 241 AAEMAKLATTLFESKGNTSSRPRVNTKSKNAQTVAATGDVVKIVADERTNSLIILASKDD 300 Query: 248 RQRITSLLKSLDVEESE-EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 + I S ++ LD E+ EG +V YL+ A A +V+VL + K D K A P S Sbjct: 301 TEAILSFVELLDKEQPTGEGKIQVVYLQNATAEEVVKVLQALPGKQTDTKNKAEAPVVS- 359 Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 +V I+AD+ TNS++I AD+ + L VI +LDI R+ V +EA+I+EV LG Sbjct: 360 --KDVQISADKATNSIIIVADKEDFKVLKDVIEKLDIPRSMVYIEALIMEVSTDKAFELG 417 Query: 367 VQWANKNV----GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 V+W + G Q G + + I S + + + Sbjct: 418 VEWRLGDNFEVNGDQAVGWAGSGGAGSEGAYTLFPTTAEIASGVAGFPTAFSMGVIGENI 477 Query: 423 FNGD-----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN 477 GD G ++ A +++ IL+ P I+ +N+ + VG++VP ++ T+S Sbjct: 478 KIGDIYFPTLGAVMRAYKNDSDVHILSAPHILATNNEESEIYVGKNVPYVTRQDTSSSSV 537 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLV 537 + + E + VG LK+TPQ+++ V L++ QEV+ + ++ +T PT R V+V Sbjct: 538 DYTSYEYRDVGVTLKITPQISQERLVRLDVFQEVTRLIETAGTTTQPTTYKRKADTTVIV 597 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 K G T+V+GGL+D+ ++ KVP LGDIP +G FR + +R K NL VF+ P II+ Sbjct: 598 KDGNTIVIGGLIDESTEGGTYKVPCLGDIPWLGWAFRSKTEKREKTNLYVFLTPRIIQTP 657 Query: 598 DVYRSLSKEKYTRYRQEQQQRIDG---KSKALVGSED-LPVLDENTFNSHAPA 646 + +S++K ++ ++ I+ K + ++ ED LP E PA Sbjct: 658 TEAKEISEKKIESIKEVEKNVIELYKRKPEQVINVEDYLPNSPEKVDEFQEPA 710 >UniRef50_A8ZWZ5 General secretion pathway protein D n=2 Tax=Desulfobacteraceae RepID=A8ZWZ5_DESOH Length = 799 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 180/612 (29%), Positives = 301/612 (49%), Gaps = 25/612 (4%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 +P A +FN+ D+ F++ + + GK ++D +V+ ++V S Sbjct: 67 LPEGLPTAADDGENLVSVDFNDVDLAVFIKFISEVTGKNFVLDQNVRTKVTVISPSKIPV 126 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKT---SPGMIADSSRPGVGDELVTRI 129 +E Y+ F S+L++YG++ + + +KVV++ + ++ G++ + P D+LVT+I Sbjct: 127 EEAYRVFESVLEVYGFATVEAGD-IIKVVKAGDARSKSIETGLVKEGRAPD--DKLVTQI 183 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG- 188 +PL A ++ L ++ SV ++ Y +N+LILT S I +L+ ++ +DV G Sbjct: 184 IPLRYADANEIKGLFTPLVSKDSV--LLAYPSTNMLILTDAYSNIQRLMRILDAIDVTGI 241 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMP------ALLSAKIVADKRTNSLIIS 242 + +I LEYA A + IL + E+ + P ++VAD R N +I+ Sbjct: 242 GRQVSVIPLEYADASKMVSILEVVFREAVDRGGPPQRGGTEPTDKIRLVADDRANVVIML 301 Query: 243 GPEKARQRITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 E +I L+ LD + + + VYYLK A A L +VL + EK D +K Sbjct: 302 ASESETVKIRKLITLLDKKVQQGKERIHVYYLKNADAEELAKVLQMLPEKQGDATAEGKK 361 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 + + ITAD TNSL+I A++ L +I +LDI R+ V +E +I EV Sbjct: 362 LAPV-LSKAINITADASTNSLIIMAERDDYLVLKEIIEKLDIPRSMVYIECLIAEVNINK 420 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKK-----NGGITSANPAWDMFSAYN 416 LG +W G+ + G + Y GG+ S M + Sbjct: 421 DFELGAEWLVGGKGSYDDKDGGYAVGFGGGSDTGYANVARMAMGGLPSGFSVGAMAESI- 479 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 + G + ++ A + IL+TP I+T DN+ A+ VG+++P L+ TTS + Sbjct: 480 -VVGGIEYPNLAAVVRAFKKDKDVQILSTPQIMTTDNQEATITVGKNIPYLTKIGTTSSE 538 Query: 477 NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAV 535 ++ E K VG LK+ PQ+NE + L+IEQE++ +D + +L P R I V Sbjct: 539 ETYSNYEYKDVGISLKIKPQINENRLIRLDIEQELTKLDQLTTVSLDRPATLKRGITTNV 598 Query: 536 LVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 +V T+V+GGL+DD KVP LGDIP +G LF+ S K NL+VF+ P +I+ Sbjct: 599 IVHDEHTIVIGGLIDDSMSRVEYKVPCLGDIPFLGWLFKGLSRSSEKTNLLVFLTPHVIK 658 Query: 596 DDDVYRSLSKEK 607 ++ ++K Sbjct: 659 TAREADNIYQQK 670 >UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gammaproteobacteria RepID=Q31J27_THICR Length = 703 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 231/682 (33%), Positives = 359/682 (52%), Gaps = 57/682 (8%) Query: 1 MKGLNKIT--CCLLAALLMPCAGHAENEQYGA--NFNNADIRQFVEIVGQHLGKTILIDP 56 MK + I C + ++ +++E+ NF ADI + +E V + GK +IDP Sbjct: 1 MKNVKLILWFCLMGLSINGHAQPESQSEEVTLKQNFQQADIEKVIEAVAKLTGKNFIIDP 60 Query: 57 SVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS 116 V+G +++ + + ++ Y+ L+IL ++GY I ++++ + + S Sbjct: 61 RVKGKVTLIAPEAMPPEDLYETLLAILHVHGYVAIP-GKTAIQIIPANLARDQVPYENPS 119 Query: 117 SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINK 176 ++ + VT ++ +E VPA L +LR ++ G++V SN +I+T S I + Sbjct: 120 AQQS---DWVTEVITIEKVPATKLVAVLRPLV--AREGHLVALSESNRMIVTDSQSNIAR 174 Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 L +VIKRVDV + ++I L +ASAE++ ++ +++S+S K + D+R+ Sbjct: 175 LKQVIKRVDVDESSGYEVIKLSHASAEEMMLVIKKVMSKSANK-------QFNVSFDERS 227 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK--- 293 N +I+SG + R+ + +L+ LDV EG +V YL YAKA LV VL ++ Sbjct: 228 NRVILSGDQDTRREMRALIADLDVSVPSEGRVQVIYLHYAKAAELVPVLQKIATNRSLLS 287 Query: 294 -----DEKGNARKPSSSGA------------MDNVAITADEQTNSLVITADQSVQEKLAT 336 + A P ++G ++I A+E+ N+++I+A V L T Sbjct: 288 SVSSDAKTSEATIPDATGNGVQVNQLDDKTLKSRISIEAEERMNAIIISAPPGVVSVLKT 347 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADY 396 VI +LDIRRAQVL+EAI+VEV + LGV+W GA GL F+ Sbjct: 348 VIKQLDIRRAQVLIEAILVEVTETKQAELGVEW-----GAAGPNGVGLINFSGTIPTIIG 402 Query: 397 KKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLA 456 AN +A G + G WG L+ AL S+++ +IL+TP+++TLDN+ A Sbjct: 403 NAGNPAAQANAIGTGVNAAFGEVSADGTG-WGALIRALNSDSEANILSTPTLLTLDNEEA 461 Query: 457 SFNVGQDVPVLSGSQTTSGD-----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 VG++VP +GS T++G N FNT+ERK VG LKVTPQ+NEGD V LEI QE+ Sbjct: 462 EIVVGKEVPFQTGSYTSTGTSSTPTNPFNTIERKNVGLSLKVTPQINEGDEVFLEINQEI 521 Query: 512 SSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 S V ++ + R I+ V+V G +VLGGLL + E KVP LGDIP +G Sbjct: 522 SDVIPKGDAVDV-QTSKRQIKTRVIVGDGNVIVLGGLLTEKETEVEKKVPGLGDIPGLGA 580 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVG-SE 630 LFR TS ER K NLMVF+RP I+RD+ + S++KY+ R EQ Q + S L G Sbjct: 581 LFRSTSNEREKVNLMVFLRPVIVRDNKMGTYYSRKKYSLIRNEQTQLLKKDSGLLEGLRP 640 Query: 631 DLPVLDE-------NTFNSHAP 645 +P L++ +F+ P Sbjct: 641 RMPTLEQWKNMESAKSFDPSEP 662 >UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLP8_9BURK Length = 807 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 214/702 (30%), Positives = 333/702 (47%), Gaps = 78/702 (11%) Query: 21 GHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL 80 +++ +++ NF NADI V +G +T ++DP V+GTIS+ S + S + L Sbjct: 54 QNSQEDKFALNFVNADIDAVVRAIGSFTNQTFVVDPRVRGTISLVSPEPLSAADAKNALL 113 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS-SRPGVGDELVTRIVPLENVPARD 139 + L L G++++ G +V+ + K + + G+ +VT++ L A Sbjct: 114 AALRLQGFTIVESG-GIARVLPENDAKVQADSVDPRKAMNQSGNAIVTQVFQLNYESATA 172 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY 199 L P+LR ++ + + Y +N L++T A + ++ +I +D + +++ LE+ Sbjct: 173 LVPVLRPLIAPNN--TIAAYPNNNTLVITDYADNLQRIARIIASIDGPYSGDLEVVPLEH 230 Query: 200 ASAEDLAEILNQLISES--HGKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRITSLLK 256 A A DLA IL +++ E + + A ++AD RTNSL++ P KAR +L+ Sbjct: 231 ALAVDLAAILGRMLDEGNRGTGAAVDAGQRLSVMADPRTNSLLLRTPSKARLNLAKALIA 290 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA----------------- 299 LD + GN V YLK A+A L + L V N+ Sbjct: 291 KLDQPTKQPGNVWVVYLKNAEAAKLAKTLQAVLSSSPISDNNSSSGLSSLSGGGVGGLGD 350 Query: 300 ------------------------------------RKPSSSGAMDNVAIT-ADEQTNSL 322 S + ++N I AD TNSL Sbjct: 351 TSNTNNSTRNITNGSAGLGSSSLGSSLGGGTSSGQLSAASGNVDLNNGGIVQADPSTNSL 410 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV----GAQQ 378 +ITA + + L ++I +LD+RRAQV VE++IVEV G+Q+ + G + Sbjct: 411 IITAPEPIYRNLRSIIEKLDVRRAQVFVESLIVEVSTDKAAEFGIQFQGLSGVGADGVRV 470 Query: 379 FTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNN 438 T + + N G + + + G L AL S Sbjct: 471 IGGTNFNDPGSGSNILGAATNLGSVGRGLNIGVIDGQVNIPGIGTISNLGFLARALESKA 530 Query: 439 KNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-----NVFNTVERKTVGTKLKV 493 +IL+TP+I+TLDN+ A +GQ+VP ++G T SG N F T+ER+ VG L+V Sbjct: 531 NANILSTPNILTLDNEEAKIVIGQNVPFITGQFTNSGGNGATVNPFQTIERQDVGLTLRV 590 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 PQV+EG V L I QEVSSV S+N + G N R+I++ VLV+TG +VLGGL++D Sbjct: 591 KPQVSEGGIVKLGIFQEVSSVVDSTNVS-GIITNKRSIESNVLVETGNIIVLGGLVEDRV 649 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 KVP LGD+P++GQ FRY + R K NLMVF+RP ++R++D +S+ +Y RQ Sbjct: 650 TGNEEKVPGLGDVPVLGQFFRYDNRRRQKTNLMVFLRPVVVRNEDQAQSIVTNRYDYMRQ 709 Query: 614 EQQQRIDGKSKALVGSEDLPVLDEN------TFNSHAPAPSS 649 QQ+ K L E PVL N+ APA S+ Sbjct: 710 LQQENQPEKRFGLPNME-APVLPSRRPADVARPNTVAPAQSN 750 >UniRef50_Q2Y7S4 Type II and III secretion system protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y7S4_NITMU Length = 789 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 211/694 (30%), Positives = 328/694 (47%), Gaps = 91/694 (13%) Query: 21 GHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL 80 A + NF NADI V+ V + K ++DP V+GTI++ S + Y+ FL Sbjct: 63 SSAGQDLVTLNFVNADIEGVVKAVSEITRKNFMLDPRVKGTINIVSAKPVPRSSVYEVFL 122 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVK--TSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 S L L+GY+V+ D G +++V ++ K P + + R GD + T++ L+ A Sbjct: 123 SALRLHGYAVVE-DYGIIRIVPESDAKLYQGPTLGPTNKRQLAGDRIQTQVFTLQYESAV 181 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 + P+LR ++ + ++ SN L++T AS + +L ++I VD + I L+ Sbjct: 182 QMVPILRPLIAPNN--SITANPNSNTLVITDYASNLQRLAKIIDSVDQPSGTEPVSIPLQ 239 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAK----IVADKRTNSLII-SGPEKARQRITS 253 +ASA D+A+ +N+L SES A + +VAD R+N+L+ SG A R+ Sbjct: 240 HASAIDVAQTVNRLFSESTQSQAEGAADPTQQRFTVVADARSNTLLARSGNRAALARLRQ 299 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV------------------------- 288 L+ LD S GN V +LK A A L E L + Sbjct: 300 LVTVLDSPTSAAGNMHVVFLKNADAVRLAETLRAIYHNMASPVSSSSGLSQGTGTAFGTS 359 Query: 289 ------SEKLKDEKGNARKPSSSGAMDNVA----------------------------IT 314 + G + S +M + I Sbjct: 360 SLGTSTGGGMGASSGTSTGGSMGTSMPGSSLGAGTVPAASTVTPAPMQTGATSATPGIIQ 419 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 AD TNS++ITA ++ L V+ +LD+RR QV +EA+I E+ G+QW N + Sbjct: 420 ADAATNSIIITAPDAIYNNLRAVVEKLDVRRVQVYIEALIAEITADRAAEFGIQWQNLSN 479 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG--------- 425 AQ G +F A G I S + +A +G+ G NG Sbjct: 480 AAQG----GTQVFGGTNFNAGTAGGGSIIS-TAQNPIANAASGLTIGIMNGLVTAIPGIG 534 Query: 426 ---DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT----TSGDNV 478 + L+ AL ++ +IL+TP+++TL+N+ A +GQ+VP+ +G + + Sbjct: 535 PVLNIHTLIRALETDANANILSTPTLLTLNNEEARIIIGQNVPIPTGQFIPPVGGAVTSP 594 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS-SSNSTLGPTFNTRTIQNAVLV 537 F TV R+ VG LK+ P ++EG+ V ++I QEVSSV + N+T G N R+I++ VLV Sbjct: 595 FQTVSRQDVGLSLKIKPLISEGNTVRVQIFQEVSSVVPGTVNATNGLITNKRSIESTVLV 654 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 G+ +VLGGL+ D + V ++PL+G IPL GQLF Y R K NLMVF+RPT++R Sbjct: 655 DDGQILVLGGLMQDSVNDSVERIPLVGAIPLFGQLFSYNKRSRNKTNLMVFLRPTLMRAG 714 Query: 598 DVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED 631 D LS +Y R EQ++ + L E Sbjct: 715 DAADPLSDAQYDRVLGEQKKVRPKFNLVLPDMES 748 >UniRef50_Q221L0 Type II and III secretion system protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221L0_RHOFD Length = 702 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 206/656 (31%), Positives = 309/656 (47%), Gaps = 37/656 (5%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 L A E NF+NADI + G +++DP V+GT+++ ++ S++ Sbjct: 34 LAQASAVSKPGEAVTLNFSNADIEAVARTMATITGTNVVVDPRVKGTLTLVTDKPVSRRA 93 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP---GVGDELVTRIVP 131 F + L L G++++ G KVV A+ K G + S +G+++ T+I Sbjct: 94 AMNQFQAALRLQGFTMVESA-GLYKVVPEADAKLQSGAVTVSDEAIGGALGNQITTQIFK 152 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 L A +L +LR ++ + NV +N L++T A + ++ +I VDV Sbjct: 153 LNFESANNLVAVLRPLISPNNTINV--NPGTNSLVITDYADNLRRMARIIAAVDVSNATD 210 Query: 192 QQIIHLEYASAEDLAEILNQLI---SESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 +I+ L++A A DLA ++ +L+ + Q +VA+ R+N+LI+ AR Sbjct: 211 VEILPLKHAIATDLAPLVLRLVESSAAGTAPGQADTSFKTILVAEPRSNALILRAANPAR 270 Query: 249 -QRITSLLKSLDVE-----ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 + SL+ LD E GN V YLK A AT L L Sbjct: 271 VALVKSLVDKLDQPAAPGLNGEAGNIHVVYLKNADATKLAATLRAAMTGQAPAAAAPGVA 330 Query: 303 SSSG--------AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 +++ + I AD TNSL+ITA + +L VI RLD RRAQVLVE++I Sbjct: 331 AAATVAVVAATQSTTGGQIQADVATNSLIITAPEPQYRQLRAVIDRLDGRRAQVLVESLI 390 Query: 355 VEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 VEV G+QW G G+ A K + + A + Sbjct: 391 VEVNADRAAEFGIQWQ----GPLGKAGDGVIGLLGTNFGAAGKNIINLATGAGAVAPGAG 446 Query: 415 YNGMAAGFFNGD--WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT 472 N A NG G L L ++ ++L+TP+++TLDN+ A +G++VP ++GS T Sbjct: 447 LNFGAVQRTNGVYVLGFLANFLETSGSGNVLSTPNLLTLDNEEAKIVIGENVPFVTGSYT 506 Query: 473 TSGD-----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD-SSSNSTLGPTF 526 ++ N F TVERK VG LKV PQ+NE V + I QE S+V + GPT Sbjct: 507 SNNTSGASVNPFTTVERKDVGLTLKVKPQINEDGTVKMVIYQETSAVKAGTEKDANGPTT 566 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 + RTI++ VLV G VVLGGLL D KVP LGD+PL G LF+ + R K NLM Sbjct: 567 SKRTIESTVLVDDGSIVVLGGLLQDKYSGNQDKVPGLGDVPLFGNLFKSEARTRNKTNLM 626 Query: 587 VFIRPTIIRDDDVYRSLSKEKYTRYRQEQQ--QRIDGKSKALVGSEDLPVLDENTF 640 VF+RP ++RD LS ++Y R Q + + + + LP L + Sbjct: 627 VFLRPVVVRDAHASDQLSMDRYDLMRSGMNAAQPVASQLVPINEAPQLPALPGSQP 682 >UniRef50_Q48JN3 General secretion pathway protein GspD n=2 Tax=Pseudomonas syringae group genomosp. 2 RepID=Q48JN3_PSE14 Length = 778 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 186/669 (27%), Positives = 311/669 (46%), Gaps = 67/669 (10%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ NF ADI+ V + + G+ L+DP V GT+++ S + + Y+ ++ L Sbjct: 94 DQLIQLNFVEADIQSVVRALSRSTGQQFLLDPKVTGTLTLVSEGSVPASQAYEMLMAALR 153 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 + G+SV+ + G VV + + G + + +P G+ ++TR L+ A +L P+L Sbjct: 154 MQGFSVVDVG-GVAHVVPEDDARLLGGPVYSADKPS-GNGMLTRTFRLQYENAVNLIPVL 211 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 R ++ + + Y +N +++T A + ++ ++I +D ++ + A D Sbjct: 212 RPIVSPNNP--INAYPGNNTIVVTDYADNLVRVAQIIDGIDTPSAIDTDVVTVHNGIAVD 269 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRI-TSLLKSLDVEES 263 +A ++++L+ G A ++ D R+N++II R + +L+ LD +S Sbjct: 270 IASMVSELLDTQGG----DATQKISVIGDPRSNAIIIRAGSPERTELARNLIYKLDNAQS 325 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE------------------KGNARKPSSS 305 N V YL+ A+A L + L G+ D K + + SS+ Sbjct: 326 NPSNLHVVYLRNAQAGKLAQALRGLLTGESDSGASDTTRAMLSGMGSTGNKNDVQGNSSA 385 Query: 306 GAMD----------------------------------NVAITADEQTNSLVITADQSVQ 331 G + V I AD TN+L+I+A + + Sbjct: 386 GPVSRTVAGSGYGQSSASPSVATAGSQQAEQNTAFSAAGVTIQADATTNTLLISAPEPLY 445 Query: 332 EKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQ 391 L VI +LD RRAQV++E++IVEV + + GVQW N+ + Sbjct: 446 RNLREVIDQLDQRRAQVVIESLIVEVSEDDANQFGVQWQTGNLNGSGGFGGVNLGGSGLN 505 Query: 392 GVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTL 451 + T N + D VL AL S +++L+TP+++TL Sbjct: 506 TGGSTSIDVLPTGLNVGVVRGAVTIPGIGEVL--DLKVLARALKSKGGSNVLSTPNLLTL 563 Query: 452 DNKLASFNVGQDVPVLSGSQTTSG----DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 DN+ AS VGQ +P ++GS T G +N F TV+R+ VG KL V PQ++EG V L+I Sbjct: 564 DNEAASIFVGQTIPFVTGSYVTGGGGTSNNPFQTVQREEVGLKLNVRPQISEGGTVKLDI 623 Query: 508 EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 QEVS+VD ++ G N R I ++L+ G+ +VLGGLL D + VP L IP Sbjct: 624 YQEVSNVDQRASLASGTVTNKRAIDTSILLDDGQIMVLGGLLQDGYNQSDEAVPWLSRIP 683 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALV 627 L+G LFR + +K NLMVF+RP IIRD R+++ +Y R+ Q ++ L Sbjct: 684 LLGVLFRNEARSTSKTNLMVFLRPYIIRDSGTGRNITLNRYEFMRRAQGNLRPERNWMLP 743 Query: 628 GSEDLPVLD 636 + + Sbjct: 744 DMQAPQLPS 752 >UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burkholderiales RepID=B1Y329_LEPCP Length = 753 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 193/659 (29%), Positives = 317/659 (48%), Gaps = 51/659 (7%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E NF NA++ + + + I++DP V+GT+++ S +Q+E + +L+ L Sbjct: 53 KETVTINFVNAEVEAVSRAMATIVNRQIIVDPRVKGTMTLYSEQPLTQREAFLNYLAALR 112 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G++V+ + G LKVV A K G ++ S GD++VT++ +++ +L +L Sbjct: 113 GLGFAVVDVA-GLLKVVPEAEAKLQTGTVSVGSVLRKGDQIVTQVFKVQHENVNNLVTVL 171 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 R ++ + + +N L++T A + +L ++I +DV + ++I L++ A D Sbjct: 172 RPLITPNN--TINANPGNNSLVITDYADNLQRLAKIIGALDVPSSTGVEVIALQHGVASD 229 Query: 205 LAEILNQLISESH--GKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRITSLLKSLDVE 261 LA ++ + S +P+ + +VAD RTNSL++ P AR + +++ LD Sbjct: 230 LAPLVQRFADTSGVTAAGAVPSAGAVSVVADPRTNSLLVRAPNAARLAAVMAVIDKLDRP 289 Query: 262 ESE---EGNTRVYYLKYAKATNLVEVLT-------------------------------G 287 + GN V YLK A AT L +VL G Sbjct: 290 SANGGPGGNIYVVYLKNADATKLAQVLRAAYGGAGGGSSGGSAATGSLASAGQANTAAGG 349 Query: 288 VSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 + + + +S+ I AD TNSL+I+A + V +L VI +LD RRAQ Sbjct: 350 TATGMSSVQATTPVAASASPSTGGFIQADPATNSLIISAPEPVYRQLRGVIDQLDARRAQ 409 Query: 348 VLVEAIIVEVQDGNGLNLGVQWAN--KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSA 405 V VE++IV++ G QW G + G + + +A Sbjct: 410 VYVESMIVKMDATQAAEFGFQWQGLLGQSGDRYGLVAGTNFGTGGNNIVNLSVGAATGAA 469 Query: 406 NPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP 465 P + G + G L L SN ++L+TP+++ LDN+ A +GQ+VP Sbjct: 470 LPGAGLNVGLLKAINGVYT--LGALARFLESNTGANVLSTPNLIALDNEEAKIVIGQNVP 527 Query: 466 VLSGSQTTSGD-----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS-VDSSSN 519 ++GS T +G N F T+ERK VG L+V PQ+ EG V + I QE SS V +++ Sbjct: 528 FVTGSFTNTGTSNGSANPFQTIERKDVGLTLRVKPQIGEGGTVRMVIYQENSSVVANTTT 587 Query: 520 STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE 579 ++ GPT + I+ V+V G +VLGGLL D +VP L IPL+G LFR + + Sbjct: 588 NSAGPTTDKSAIETTVVVDDGSIMVLGGLLKDDYGSGEDRVPGLASIPLIGGLFRSENRK 647 Query: 580 RAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDEN 638 R K NL+VF+RP ++R +L+ ++Y R +Q K ++G + PVL E Sbjct: 648 RTKSNLLVFLRPVVMRSQQDANALTLDRYDAIRAQQMNEQP-KPSTVLGINESPVLPER 705 >UniRef50_B1JDL3 General secretion pathway protein D n=6 Tax=Pseudomonas RepID=B1JDL3_PSEPW Length = 650 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 193/608 (31%), Positives = 327/608 (53%), Gaps = 28/608 (4%) Query: 28 YGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYG 87 Y NF + ++ +F++ V + G T ++DP V+G ++VR+ D Y FL+ L G Sbjct: 34 YEVNFVDTELGEFIDSVSRITGTTFIVDPRVKGKVTVRTVDRHDADAIYDIFLAQLRAQG 93 Query: 88 YSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG-DELVTRIVPLENVPARDLAPLLRQ 146 Y+ + L NG +K+V + P + + + G G D + TR+ + N + + +L+ Sbjct: 94 YAAVDLPNGSVKIVPDQAARLEPVPVEAAGKHGEGSDGVATRVFNVRNAASEQMLGILKP 153 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLA 206 ++D VG + Y +N+L++T S + ++ +++++D + E +++ L +ASA D A Sbjct: 154 LIDPR-VGVITPYPAANLLVVTDWRSNLERIDSLLRQLDQVSDEPLKVMPLRHASAADTA 212 Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE-- 264 ++L +L++ G S ++VAD R+N+L++ G R+ +LL LD Sbjct: 213 QLLTRLLAREQG------ADSTQVVADPRSNALLVRGS---TDRVRALLGQLDQPSENRH 263 Query: 265 EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS-------SGAMDNVAITADE 317 NT+V YL++A A +V+VL G+S++ A + + + + + + +E Sbjct: 264 SSNTQVIYLRHANAGEVVKVLRGLSQEGGVPSEGAGEGEAKDKPVMAAASDSGIRLEYEE 323 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK----N 373 TN++V+ S +++ +LDIRRAQV+VEAII EV D LGVQW Sbjct: 324 GTNAVVMVGPDSELAAYRSIVEQLDIRRAQVVVEAIIAEVSDSRAQELGVQWLFADEKFG 383 Query: 374 VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTA 433 G F + G+ I N A A + + + GF ++ +L+ A Sbjct: 384 AGIVNFGSNGVNIANIAGAAASGDNEALGDLLSATTGVTAGIGHFGGGF---NFAMLINA 440 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 L + ++L+TP+++TLDN AS VGQ+VP ++GS T + N + T+ERK VG KL++ Sbjct: 441 LKGKSGFNLLSTPTLLTLDNAEASILVGQEVPFVTGSVTQNNANPYQTIERKEVGVKLRI 500 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 PQ+N ++V L+I QEV S + S++ N R I+ V+V+ V+LGGL+ D Sbjct: 501 KPQINIDNSVRLDIVQEV-SSIADSSAASDVITNKREIKTKVMVEDNGLVILGGLISDEL 559 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 +VP LGDIP +G+LFR +++ K+NLMVFIRP I+RD LS++KY +Q Sbjct: 560 STSDQRVPFLGDIPGLGRLFRSEASKNTKQNLMVFIRPRILRDGPSLAGLSEDKYRTLQQ 619 Query: 614 EQQQRIDG 621 ++ G Sbjct: 620 TTPLKLPG 627 >UniRef50_B3E7M1 General secretion pathway protein D n=8 Tax=Geobacter RepID=B3E7M1_GEOLS Length = 648 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 186/630 (29%), Positives = 321/630 (50%), Gaps = 21/630 (3%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK L + LL L HA + NF + +I V+ + + GK ++D V+G Sbjct: 1 MKQLKALLIALLLMTLCSSPLHAAAQGVIMNFTDVEIATMVKFISELTGKNFVLDERVKG 60 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 +SV S SQ E + F S+L+L G+++I KVV + + K + +AD R Sbjct: 61 KVSVFSPSKLSQDEAFALFTSVLELKGFTLIQAG-KVYKVVPTGSAKQAGMKLADKERIP 119 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 +GD + R+ PL + +++ L+ ++ G++ + P N+L++ AS + K+ ++ Sbjct: 120 LGDAFLARVFPLTQISSQEALTFLQPIISK--EGHIGSFGPGNMLLVVDAASNLQKVADI 177 Query: 181 IKRVDVI-GTEKQQIIHLEYASAEDLAEILNQLISESH------GKSQMPALLSAKIVAD 233 + +D E ++++L++ SAE + ++L + ++ G +Q + +++AD Sbjct: 178 LSLIDTPQRREGAELVYLKHGSAEGVTKVLQEWLAGRGARQVAVGTTQSANSGAVQVLAD 237 Query: 234 KRTNSLIISGPEKARQRITSLLKSLD-VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 R N++++ GPEK ++ I SL+ LD V +L+ AT + +VL GV + + Sbjct: 238 TRLNAVLLFGPEKDKKDIRSLIAQLDVTPPEASSKINVCFLENTDATEMAKVLDGVVKGI 297 Query: 293 KDEK-----GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 + G SS V ITAD+ +NSLV+ A + L VI +LD R Q Sbjct: 298 TAQTTTLQAGTVSAQSSPFDSGKVTITADKASNSLVVMASPTDYNNLLQVIKKLDRRSKQ 357 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP 407 V V+ +I E+ +LGVQ VGA G I++ + +S +P Sbjct: 358 VFVQVLIAEISPSKSRDLGVQSGAFAVGALGKYLQGGGIYDPFNTFGSLLGS--GSSTSP 415 Query: 408 AWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL 467 + + + G +L AL S +IL+TP+I+T DNK A NVG++VP Sbjct: 416 LSTLIADKLKNTSKPVTG--AAILQALESEGMLNILSTPNILTTDNKEAEINVGENVPFK 473 Query: 468 SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFN 527 S S T S +VERK +G LK+ PQV+EGD + +++ QE+S+V S + Sbjct: 474 S-SSTQSTFGTTESVERKDIGINLKIKPQVSEGDYIRMDLYQEISAVKSDKGDAVDLVTT 532 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 R+ + +V+VK ET+V+GGL+ D + KVPLLGDIP +G F+ T+ R K NL++ Sbjct: 533 KRSAKTSVVVKDNETIVIGGLIQDTEDNTIQKVPLLGDIPGLGWFFKTTTKTRKKTNLLI 592 Query: 588 FIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 + P +++D S+++ + ++ + ++ Sbjct: 593 MLTPQVVKDARDLASITESQKGKFTEAAKE 622 >UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1Q9C2_PSYCK Length = 750 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 190/662 (28%), Positives = 319/662 (48%), Gaps = 60/662 (9%) Query: 9 CCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSND 68 CL L G E + N +ADI+ F+ V + ++DP + G ++V SN Sbjct: 26 LCLAIPLWAASTGLVSAESWKVNLQDADIKAFINEVATITNQNFVLDPRINGNVTVISNK 85 Query: 69 TFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTR 128 S+ E YQ FLS++ + G + I +K+V K + G+ D VG+ L TR Sbjct: 86 PLSRDEIYQLFLSVMQVNGIAAIDSG-TTIKLVPDNVAKQT-GVAVDLRGESVGETLATR 143 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 ++ L N A ++ ++R +M + + N L+L+ RA ++N+L +I+ +D Sbjct: 144 VIYLTNTQAAEVLGVIRPLMPPSA--HAAAVPGVNALVLSDRADSLNQLTALIRDLDSNV 201 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 + Q+I L + AE + E+++ L++ S G Q K++AD ++ L++ G + Sbjct: 202 NDSLQVIPLRHVDAERMMELISALVA-SAGSGQATGNNQLKVIADTASDRLLVKGSPEMI 260 Query: 249 QRITSLLKSLDVEESEEGN-TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 ++ ++ LD S + RV+ LKYA A ++ E+L G+ S + Sbjct: 261 AKVQEMVNQLDTTPSRRLSGLRVFRLKYASAGHIAEMLRGLLASQSINSSGGSSTLESAS 320 Query: 308 MDNV---------------------------------------------AITADEQTNSL 322 +++ +I ADE N++ Sbjct: 321 LNDAAATGSSLTGGANSKVGSNSIGGTAATPLPNNSSAGTSIGIGGRPFSIIADETQNAV 380 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNT 382 ++ A + ++ + +LD RR+QVL++A IVEV + LGVQWA N + Sbjct: 381 IVNAAPELMFEIEDAVNQLDSRRSQVLIQAAIVEVSGDDATQLGVQWALGNANSGYGVVN 440 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-----WGVLLTALASN 437 + +A +A +GG + A + A G+ + + +G +L AL S+ Sbjct: 441 FNNVGASAVSLAAAALSGGTGISAAAGSIAGALLGIGSSSKDSKGNAQFYGAILQALDSS 500 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT---SGDNVFNTVERKTVGTKLKVT 494 ++L+ PSI+TLDN+ AS VGQ+VP ++GS TT S N F T++R+ +G L V Sbjct: 501 TSANLLSMPSILTLDNEKASILVGQNVPFVTGSYTTGSDSSTNPFQTIDRQDIGINLNVI 560 Query: 495 PQVNEGDAVLLEIEQEVSSVDS-SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 P + V LE+ QEVSSV S+ + G N I +L +T+ LGGL+ D S Sbjct: 561 PHIGANGTVRLEVSQEVSSVVPGSAGNASGLITNKSLINTTILADDQQTIALGGLMRDNS 620 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 + KVP LG++PL+G+LFR + K NL++F++PTI+RD S+++ KY + R Sbjct: 621 TTRQQKVPGLGNVPLIGRLFRSDNDNSQKSNLIIFLQPTILRDGGAVASVTERKYNQMRV 680 Query: 614 EQ 615 Q Sbjct: 681 LQ 682 >UniRef50_Q7NRG7 Probable type II secretion system protein n=1 Tax=Chromobacterium violaceum RepID=Q7NRG7_CHRVO Length = 708 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 203/681 (29%), Positives = 322/681 (47%), Gaps = 68/681 (9%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 ++K+ L +N+ NF NADI V+ +G+ GK +IDP V+GT++ Sbjct: 3 ISKLVVALSLIYSCNLLAAPQNDTVMLNFVNADIETVVKAIGEISGKNFIIDPRVKGTVN 62 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 + S+ + YQ LS L L G+S + NG +K+V A+ K R G GD Sbjct: 63 IVSSRPVPRALSYQVLLSSLRLQGFSAVE-GNGVIKIVPEADAKLHAKASKRIPR-GDGD 120 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 L+T++ L N A L P++R ++ + V Y +N LI+T A I ++ +I+ Sbjct: 121 RLITKVFALRNSNANQLVPVIRPLVSPNN--TVAAYPQANALIVTDYADNIQRIESIIES 178 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 V+ +I + + SA +LA LN+L+ E I+AD R N L++ Sbjct: 179 VESAAAGDTVVIPVLFGSAVELANSLNKLMQEGGADGG-----KTTILADARANVLLVRA 233 Query: 244 P-EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVL--------------TGV 288 ++ SLLK LD N RV YLK A+A+ + + L + + Sbjct: 234 DTPGKIGKVKSLLKVLDQPSQAGSNVRVVYLKNAQASEVAKTLRLLLASEGSPVQTRSTI 293 Query: 289 SEKLKDEKGNARKPSSSGAMDNVA------------------------------ITADEQ 318 + + PS++G+ + I AD Sbjct: 294 NTATSTGGSASLMPSTTGSGSGASAQNPVSSPDAGAAVAASSSSAPSGAGVGTMIQADSN 353 Query: 319 TNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQ 378 +N+L++ + + L VI LD RRAQV VEA+++EV +GVQWA G Sbjct: 354 SNALILNVPDPMYQNLRNVIDLLDKRRAQVYVEALVMEVTASRATKIGVQWAANVHGNGL 413 Query: 379 FTNT----GLPIFNAAQGVADYKKN--GGITSANPAWDMFSAY--NGMAAGFFNGDWGVL 430 N+ P+ G +D G + S+ + +A G G+L Sbjct: 414 IGNSLPSPSKPLVPGGSGASDTPGTALGSLVSSLTGGGLTAAIINTITVGGQQIPTLGLL 473 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS----QTTSGDNVFNTVERKT 486 AL + +++A+P +VT+DN+ A +GQ++ V + + + + ++T +RKT Sbjct: 474 AQALEQEAQGNLVASPQLVTMDNEKAKIVIGQEIGVPTATYPAGTNGTSNAPYSTYDRKT 533 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-NSTLGPTFNTRTIQNAVLVKTGETVVL 545 VG L++TPQ++EG + ++I Q S+D ++ ++ GPTFN RT+ V V G V L Sbjct: 534 VGFGLEITPQISEGGTIRMKISQAADSIDQTTLSAAAGPTFNRRTLDTVVTVGDGGLVAL 593 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL + + KVPLLGDIP++G LF+Y ER K NLM+FIRPTIIRD+ R+++ Sbjct: 594 GGLTQETTSNAEDKVPLLGDIPVIGNLFKYQGKERKKTNLMIFIRPTIIRDEIGNRAVAG 653 Query: 606 EKYTRYRQEQQQRIDGKSKAL 626 E+Y E R G+ L Sbjct: 654 ERYGYV-MEDAARNVGRKLPL 673 >UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyphomonadaceae RepID=Q0ASR3_MARMM Length = 650 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 206/658 (31%), Positives = 340/658 (51%), Gaps = 34/658 (5%) Query: 8 TCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 C+L+ L++ A+++ NFN A+I+ ++ V G T ++DP+V+G +++ S Sbjct: 11 ALCVLSVLVLAPMARAQDQ--VVNFNQAEIQAVIDDVSAVTGYTFIVDPNVRGRVTITSQ 68 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 + +Y+Q FLS + ++GY+V+ +G ++V S + + R GD+ VT Sbjct: 69 APLTSDQYFQVFLSTMRVHGYTVVPTASGAYQIVPDQAGARSANPVNSNLR---GDQYVT 125 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 +V L +V +RD ++R ++ G+ G+V E NVL++ A I +L +VI+ +D Sbjct: 126 AVVRLNHVASRDALAVVRPLI--GAQGSVNATETGNVLVMVDYAENIARLRQVIRDLDRD 183 Query: 188 GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 + +++ L SA D+ IL Q+ + S + + + I +N++++ G A Sbjct: 184 TSV-VEMVELTNVSAGDMTRILQQMRTSSTA-GEDETIFNVAIAPIPASNTVLLRGNRDA 241 Query: 248 RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 R+ +L++ +D + RV YL +A +L+ +L V + L +G R PS Sbjct: 242 VDRMIALVRRVDSVSQSNRSFRVIYLSHADGEHLLPILQQVVDTLVAGEGTTRAPS---- 297 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 ++ TN+LVI AD VQ +L VI +LDIRR QVLVE IIVE+ D LGV Sbjct: 298 -----VSHHAPTNALVINADPDVQRQLELVIRQLDIRRPQVLVEGIIVEMSDSTARELGV 352 Query: 368 QW------ANKNVGAQQFTNTG---LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM 418 Q + + +F++ L + AA D + ++ + A + +G Sbjct: 353 QMLLAGGEGDTPLAMTRFSSNNPDLLALTGAATSPGDDDSDLNVSLRDAAINSLLGASGG 412 Query: 419 AAGFFNGD-----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 GF + +G++L A+ S+ +++LATPSI+ LDN+ A F GQ++PV +G Sbjct: 413 TLGFGGQNGSGNLFGLVLNAVESDVNSNVLATPSIMALDNEEAYFLSGQEIPVTTGEALG 472 Query: 474 SGD-NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF-NTRTI 531 S + N F TV+R+ VG KL V PQ+ EG+ V L I QEVSSV + N+ N R I Sbjct: 473 SNNTNPFRTVDREEVGVKLTVLPQITEGNTVRLHIVQEVSSVAGAVNAGSSDLITNKREI 532 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 VL GE +VLGGL+ + VP L +P VG+LFR + + NLMVFIRP Sbjct: 533 STTVLADNGEIIVLGGLIQQEDEISEDGVPGLRRLPGVGRLFRSEGSTTRRTNLMVFIRP 592 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAPSS 649 TIIR + ++L+ +Y R EQ + +L ++ +++ + + A P Sbjct: 593 TIIRSEADMQALTDNRYDFIRNEQIAGSPNGTSSLESIVEMMLVEMDAPVATAETPGD 650 >UniRef50_C4K9Q5 General secretion pathway protein D n=1 Tax=Thauera sp. MZ1T RepID=C4K9Q5_THASP Length = 728 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 199/690 (28%), Positives = 306/690 (44%), Gaps = 67/690 (9%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 C HA E NF NA+I ++ +G+ G+ LIDP V+G I++ +N + + YQ Sbjct: 38 SCLVHAAGEPVALNFQNAEIDAVIQAIGRISGRNFLIDPRVKGKINLVTNTPVAPELTYQ 97 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIA---DSSRPGVGDELVTRIVPLEN 134 LS L L GY+ I ++G K+V A+ K + + GD LVT++ L + Sbjct: 98 ILLSALRLQGYAAIE-ESGVTKLVPEADAKLHGVPVVSGRPGAGAARGDRLVTQVFALRH 156 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 A + ++R ++ A + V + +N L++T A + +L VI +D + Sbjct: 157 ESAVHMVNVVRPLVSANNA--VTAFPGNNTLVVTDYAENLRRLATVIDSIDTPQG-DVAV 213 Query: 195 IHLEYASAEDLAEILNQLISES-HGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 + L++A A DLA +L +L++E G L +IVA+ +NSL++ +R Sbjct: 214 LQLQHAMANDLAPVLVRLLAEQQTGGQNAGGLAPPQIVAEPNSNSLLVRADTPSRLAALR 273 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL--------------------- 292 L + G+ RV YL+ A A + L Sbjct: 274 QLVTALDRPGAGGDIRVVYLRNADAVQVAATLNAALAGEGGTSDAASTQPLSRNSGGGSG 333 Query: 293 --------------------KDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQE 332 + S A + D N+L+ITA +V Sbjct: 334 FGTDSSAPSGMGVASAPLRGTGSTSGSAAGGLSSATRGGMVQPDAVNNALIITAPDAVYR 393 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG 392 L VI +LD RRAQV +EA+I E+ G QW A + G +FN+ G Sbjct: 394 NLRAVIDQLDRRRAQVYIEALIAEISTERAAEFGFQW-VAGASAGEVGVLGAQLFNSGGG 452 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFN-------GDWGVLLTALASNNKNDILAT 445 G + G N GVL L + +IL+T Sbjct: 453 NLGQLIAGSADRTRLTLPNNGLNLVVGGGKVNVPGIGEVLSLGVLARFLENEVSANILST 512 Query: 446 PSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-----NVFNTVERKTVGTKLKVTPQVNEG 500 P+++TLDN+ A VG+++P ++G +G N F T+ER+ VG L V PQ++EG Sbjct: 513 PNLITLDNEEARIVVGRNLPFVTGQYANTGGGTTPANPFQTIERRDVGLTLHVKPQISEG 572 Query: 501 DAVLLEIEQEVSSVDSS--SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS 558 A+ L+I QE S+V S S + R+I++ VLV G + LGGL++D Sbjct: 573 GAIRLQIYQEASAVVGSAESAAAGNSVTTKRSIESMVLVDDGAILALGGLVEDSYSGGEE 632 Query: 559 KVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQR 618 KVP+LGD+P G LFRY + +RAK NL+VF+RP I+RD + Y +L+ +Y + Q Sbjct: 633 KVPVLGDLPFAGSLFRYDTRKRAKTNLVVFLRPVILRDRESYAALTDSRYDYVIGRRDQL 692 Query: 619 IDGKSKALVGS--EDLPVLDENTFNSHAPA 646 G + E PV+D F PA Sbjct: 693 PSGANLLRDPPPGEPAPVVD-LAFRPLQPA 721 >UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V9I3_SPHWW Length = 682 Score = 446 bits (1148), Expect = e-124, Method: Composition-based stats. Identities = 177/686 (25%), Positives = 317/686 (46%), Gaps = 71/686 (10%) Query: 3 GLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTI 62 L+ + +A + G ++ N DI E + + G+T+++DP+V+GT+ Sbjct: 8 ALSALVAAAMAGTPILAQGASQAADVVVNMRAVDIADVAEQISRITGRTLILDPAVKGTV 67 Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG 122 +V S + S + F S+L ++G++ + +++ A+ G S G Sbjct: 68 NVTSAEPLSVDGVWDLFQSVLRVHGFAAVKSGRS-WRIIPQASAIRDAG----SGGRLSG 122 Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 ++ TR+V L+NV A + R ++ G++ N +I+T A + ++ + + Sbjct: 123 QDVTTRMVRLQNVSGEQAARVFRPLV--AQFGSIEAMASPNAIIVTDYAENVRRIESLAR 180 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 +D G + I L YA+A+D+A + ++ + ++VAD+R+N +++ Sbjct: 181 ALDSGGGGRFDSITLRYANAKDVAAAIQGVMGDGTATGG------PRVVADERSNIVLVR 234 Query: 243 GPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKD-------- 294 G L ++D + TR+ L A ++ EVL GV + Sbjct: 235 GEPAMVSEARRLAHTIDKPGAGVPITRMIRLNNGDAESVTEVLQGVLGEQGTVTNPAARA 294 Query: 295 ----------EKGNARKPSSS---------------------------------GAMDNV 311 ++ NA ++ + ++ Sbjct: 295 VAGGRARITRQQSNAGAQAAGLSLGSTPATLGGGLADAASPGAGGSGGDATPKGFSTPDL 354 Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 + + N++V+ + ++ +IA+LD+RR QVL+EA IVE+ L VQ Sbjct: 355 TVQPAPELNAIVLRGTPAAIAEVEPLIAQLDVRRPQVLIEAAIVEISGDQAEQLAVQLGI 414 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLL 431 + + + + G +PA + G A F ++ +LL Sbjct: 415 GAAAINRASGGATSFTSPGLPLQSILTAIG----SPAAGAVLSNGGSANIRFGDNFSILL 470 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--NVFNTVERKTVGT 489 A+ + ++++L+TPS+ TLDN+ A VGQ+VP +GS +T G+ N F T+ER+ VG Sbjct: 471 QAIGQSTRSNLLSTPSLTTLDNEPAEIVVGQNVPFRTGSFSTDGNTINPFTTIERQDVGL 530 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLL 549 L+V P++++G+ V LE+ QEVSS+ ++ N R+IQ +VL G+T+VLGGL+ Sbjct: 531 TLRVVPRIHQGNVVRLEVAQEVSSLTNAVTGAADLITNRRSIQTSVLADDGQTIVLGGLI 590 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 D + S+VP+LGDIP+ G+LFR KR L VF++PTI+RD + S+++ KY Sbjct: 591 SDDRTQTRSQVPILGDIPIAGELFRSRKESHVKRTLFVFLKPTILRDREAANSVTQAKYA 650 Query: 610 RYRQEQQQRIDGKSKALVGSE-DLPV 634 R R ++ G L LPV Sbjct: 651 RTRYDEAMLGKGPPLLLEPPGRRLPV 676 >UniRef50_C6XJ47 General secretion pathway protein D n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJ47_HIRBI Length = 660 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 196/656 (29%), Positives = 323/656 (49%), Gaps = 47/656 (7%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQY-------------GANFNNADIRQFVEIVGQHL 48 K L+ +L + P A ++ N + DI ++ V Sbjct: 7 KVLHGAALAMLGGFIAPMGQQAIADELGETSVRADGTSVHVMNLKDVDISVLIDDVSAIT 66 Query: 49 GKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKT 108 G T ++ PSV+G +SV S + +E +Q FLS L ++G++ I G K+V + Sbjct: 67 GHTFVVHPSVRGRVSVSSQTPLTNREVFQVFLSTLRVHGFTAIPSRGGVYKIVPEQSASA 126 Query: 109 SPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILT 168 G+ S GD+ T ++ L N A + A +++ + + G + SN LI+ Sbjct: 127 EAGLARPSVG---GDQFETAVIRLRNFDATEAAKMIKPITNPQ--GQLTASGESNTLIVV 181 Query: 169 GRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSA 228 A+ I+++ +V+ ++D +E I L SA ++A +N + S G A Sbjct: 182 DYAANISRVRKVVAQIDEDQSETL-TIALTNMSATEMANTVNSMKSTGRG----SAGFKV 236 Query: 229 KIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTG 287 A + NSLI+ G K + ++++LDV E+ + +V LK+++A ++ +L Sbjct: 237 TATAVESNNSLIVKGDIKDVAEVHEIVRNLDVANREDDASLKVLSLKHSEAKDIAPILEM 296 Query: 288 VSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 + ++L ++ AR +++ ++ +AI E TNSLV++A V +L V+ LD RR+Q Sbjct: 297 MGQRLAEQ---ARPGANASSVPKIAIY--EPTNSLVVSASPMVLRQLERVVEELDQRRSQ 351 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP 407 VLVEAIIVE+ D LG+++ G+ + V + S Sbjct: 352 VLVEAIIVELSDNAARELGLEFVLSGSGSSATPFAATNFTRSTTNVLSLAGALALDSDTV 411 Query: 408 AWDMFSAYNGMAAGFFNGD----------------WGVLLTALASNNKNDILATPSIVTL 451 + S+ A G +G ++ A+ S+ +++L+TP ++T+ Sbjct: 412 GEETVSSLRSAAISSLLGSAGGLLGIGGQSSDGTIFGAIINAVDSDITSNVLSTPHLLTM 471 Query: 452 DNKLASFNVGQDVPVLSGSQ-TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE 510 DN+ AS VGQ+VP+ +G T+ N F TVERK +G L+V PQ+ EGD++ L + QE Sbjct: 472 DNEKASITVGQEVPITTGEALGTNNSNPFRTVERKPLGVTLEVEPQIGEGDSIKLNLRQE 531 Query: 511 VSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 VSS+ S + T N R I +L GE VVLGGL+ + +SKVPLLGDIP VG Sbjct: 532 VSSIFDSIDGTDF-ITNNREINTTILADDGEIVVLGGLIQEEETLNISKVPLLGDIPGVG 590 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 +LF T + + NLMVF++PTI+RD + + + +KY RQEQ + L Sbjct: 591 RLFSSEGTTKKRTNLMVFLKPTIVRDAETMQRATDQKYRYIRQEQMSASRSERAGL 646 >UniRef50_Q1JVV5 Type II and III secretion system protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV5_DESAC Length = 665 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 197/653 (30%), Positives = 324/653 (49%), Gaps = 41/653 (6%) Query: 8 TCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 + L L C + +F + ++ + V + GK + D S++G ++ S+ Sbjct: 17 SVLLAGPLTSACQAQTDGVGITLDFKDIELTDLIRTVSELTGKNFVYDDSIRGKATIISS 76 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 S E YQ FL++L++ GY+V+ K+V + K S + D+ VT Sbjct: 77 QQMSVNEAYQLFLTVLNVKGYTVVPSGKTN-KIVPIKSAKESNLPTMTGNLAQ--DQFVT 133 Query: 128 RIVPLENVPARDLAP-LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 R++ LEN+ A D+A +L +M S NVV YEPSN+LI++ AS I +L +I+ +DV Sbjct: 134 RMISLENINAADIAESILSPLMPKTS--NVVVYEPSNMLIISDSASNIQRLTTIIRELDV 191 Query: 187 IGT-EKQQIIHLEYASAEDLAEILNQLISESHGK-----------SQMPALLSAKIVADK 234 G + Q+I L++A A++ A I N ++S + K + A ++K++A + Sbjct: 192 PGALQDMQVIPLQFADAKETATICNDILSSGNTKATSRRRASKNVTTSSADATSKVIAYE 251 Query: 235 RTNSLIISGPEKARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGVSEKLK 293 RTN L++ I SL+ LD E ++E +YYL+ A A L + L + +K Sbjct: 252 RTNRLVVMATSDDMTTILSLIAELDQEPTQEHARINLYYLENADAEELSKTLNEILSGIK 311 Query: 294 DEKGNARKPS-------SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 ++ + ++ NV ++AD+ TN+LVI A + +I +LDIRR Sbjct: 312 KPATSSSAAAGGKGTIPAAAIQTNVTVSADKPTNALVINATPEDYVIIKDIIKQLDIRRK 371 Query: 347 QVLVEAIIVEVQDGNGLNLGVQ----WANKNVGAQQFTNTGLP--IFNAAQGVADYKKNG 400 QV VEA+I+E+ LG Q + N G ++ P I + + + NG Sbjct: 372 QVYVEALIMELSMDATEALGSQLQGAFEVGNEGIVNLSSNSAPGGILSDPESLLTTSVNG 431 Query: 401 GITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNV 460 + + L+ + +IL+ P ++T DN+ A V Sbjct: 432 LLAGGFSKLIGVDTDGDGVDDSQVTAFSALIKLSKDDTNVNILSAPRLLTSDNEEAEIVV 491 Query: 461 GQDVPVLSGSQTTSGDN----VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS 516 G++VP+++ T S + +VERK V L+ TPQ+ EG+ V L + QE + + Sbjct: 492 GRNVPIITSRLTDSTGSDSLAQSVSVERKDVALTLRFTPQITEGELVRLNVYQETTDLTD 551 Query: 517 SSN--STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFR 574 S +++GPTF TR I N VL + G+TVVLGGL+ +E +SKVPLLGDIPL+G LF+ Sbjct: 552 SVGDVNSVGPTFTTRKISNTVLARDGQTVVLGGLISTNQQETISKVPLLGDIPLLGWLFK 611 Query: 575 YTSTERAKRNLMVFIRPTIIRDDDVYRSLS---KEKYTRYRQEQQQRIDGKSK 624 + K NL+VFI PTII D + +++ +E + R + + + D + Sbjct: 612 SKDNKEVKTNLLVFITPTIISDMEDLSNVTTINRETFDRIKNDPEASNDNTEQ 664 >UniRef50_C6CIN5 General secretion pathway protein D n=1 Tax=Dickeya zeae Ech1591 RepID=C6CIN5_DICZE Length = 696 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 231/682 (33%), Positives = 353/682 (51%), Gaps = 81/682 (11%) Query: 5 NKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISV 64 +T + +L A + N +Y A+F +I++FV Q L K I+IDPSV G ISV Sbjct: 24 KAMTTDDVHSLAATTAANTSN-KYSASFREVEIKEFVATAAQVLKKNIIIDPSVTGQISV 82 Query: 65 RSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDE 124 RS D + +Y+ FFL++++ YGYSV+ +DN L +V A + ++ R Sbjct: 83 RSYDDLDETQYFVFFLNVMETYGYSVVQIDNHTLNIVPLAQSLRAAWTEGNTGREKN--- 139 Query: 125 LVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 +V R+ ++ +P +L P+L + + + +Y P N+ I TGR + +L++++ +V Sbjct: 140 IVVRLAKMDALPGSELEPILSR-ISEDVAVKLKYYSPGNLFIFTGREDVVKRLVDIVNQV 198 Query: 185 DVIGTEKQ-QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 D + + ++ A A D+A+ L + + L I + T ++++ G Sbjct: 199 DNARKDNSPAVFNVSRAKASDIAKSLQSAFKNLSPEDKDAPL----IYGNDATRTIVVKG 254 Query: 244 PEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE-------- 295 + I L+ ++DV + + RV++LKYA A + ++ T + Sbjct: 255 SAHVKTEIRRLISTMDVPDQQS---RVFFLKYADAAQMAKLFTNNQSGSSEPGLLPMAGD 311 Query: 296 -----------------------------KGNARKPSSSGAMDN---------------V 311 GN P S N + Sbjct: 312 SGMSMDAQLAQQQPGGMSSGQPVNPDGQAAGNGTAPVSGAGFSNDLGSLFGGGDALVRQI 371 Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 + AD N+L+++A + A++I +LD+R QVLVEAI+VEVQ GLNLG+ W N Sbjct: 372 RVHADRDNNALIVSAPPDAMRQAASIIRQLDVRHEQVLVEAIVVEVQQAEGLNLGIAWGN 431 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLL 431 +N G F + + G NP + G+ AGF++G+WG L Sbjct: 432 RNYGGSNFNSVNV--------------GNGFNQPNPLVNALKGTEGLVAGFYHGNWGTLF 477 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKL 491 AL SN +N+ILATPS+VTLDN A FNVGQDVP+L+GSQTT+ DN+FNTV+R+T+G K Sbjct: 478 NALESNKRNNILATPSVVTLDNHRAEFNVGQDVPILTGSQTTNNDNIFNTVQRRTIGIKF 537 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSS--NSTLGPTFNTRTIQNAVLVKTGETVVLGGLL 549 + P++N+ +LL I QE+SS+ ++ NS LG FN RT+ N V V+ ETVV+GGLL Sbjct: 538 SILPRINQSGTILLNISQEISSLSDTAQVNSNLGSVFNIRTVNNVVQVQDDETVVIGGLL 597 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 DD KE +KVPLLGDIP +G LFRYTS KRNLM+FIRP IIR + V + ++ + Sbjct: 598 DDEKKETTNKVPLLGDIPWLGNLFRYTSQNNDKRNLMLFIRPRIIRGNGVEAAQARRGAS 657 Query: 610 RYRQEQQQRIDGKSKALVGSED 631 ++ R +S+A G Sbjct: 658 SSVADEAVRNFSESQATEGPNA 679 >UniRef50_B8GXR3 Type II secretion pathway protein D n=3 Tax=Caulobacteraceae RepID=B8GXR3_CAUCN Length = 687 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 185/656 (28%), Positives = 298/656 (45%), Gaps = 54/656 (8%) Query: 11 LLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTF 70 + A L P A+ + N +ADIR F++ V + G T +IDP V+GT++V SN Sbjct: 20 MGGASLGPAPVLAQTQL--LNVQDADIRVFIQDVAKSTGTTFIIDPRVKGTVTVASNGPL 77 Query: 71 SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIV 130 +++E ++ FL+ L + NG ++ S N P G + T + Sbjct: 78 NRRELFEVFLATLRANNFVATPAGNGAYRIEPSENAARQPS--------AAGGQFATEVF 129 Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 L + A +L+ ++ G VV V+++ A + ++ ++ +VD Sbjct: 130 RLRTLDAASAVEMLKPLVGPQ--GQVVANPRGAVVVVADYADNVRRIRGLLAQVDQDRAM 187 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 + L ++SA ++A++LN +++ + + +V +NS+++ G A QR Sbjct: 188 -VHTVTLTHSSAREIAQVLNDMLATPGAEGKSGRGA-VTVVPVDSSNSVLLRGDSDAVQR 245 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEK------------------- 291 + ++ LD + RV +L++A A ++ VL + + Sbjct: 246 LLPVIADLDRRAESSDDVRVVFLRHANAEQMLPVLQQLVGQATTSVTTSSSRGLSNARTA 305 Query: 292 -----LKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 + S I N+L+I A Q LA VI +LD+RR Sbjct: 306 TGASTATTAPSAPVAATPSANGPQATIARFPGANALIINAPPETQRTLAEVIRQLDVRRE 365 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ---------QFTNTGLPIFNAAQGVADYK 397 QVLVEAI+VEV DG LGVQ+ T + LP+ AA Sbjct: 366 QVLVEAIVVEVTDGTAKQLGVQFLLGGTNGTIPFVATNYTNATPSLLPLVGAAATTTSGA 425 Query: 398 KNGGITSA-NPAWDMFSAYNGMAAGFFNGD----WGVLLTALASNNKNDILATPSIVTLD 452 + S + A +G+ +G +G ++ A+ + +++L+TPSI+TLD Sbjct: 426 DTEALKSLRDAAVSSLLTASGVTSGVVGRSGDALFGAIINAVKKDTGSNLLSTPSIMTLD 485 Query: 453 NKLASFNVGQDVPVLSGSQTTSGD-NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 N+ A VGQ+VP+ +G + N F T++R+ VG +L+V PQ+N G + L + QEV Sbjct: 486 NEEARILVGQEVPITTGEVLGDSNANPFRTIQRQNVGIQLEVKPQINAGGGITLFLRQEV 545 Query: 512 SSVDSSSNSTLGP-TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 SSV + N R I+ LV G+ VVLGGLLD + + P LGD+P +G Sbjct: 546 SSVAGPVSVGSSELIINKREIETTALVDDGDIVVLGGLLDQQETQSAQRTPGLGDVPGLG 605 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 LFR T+ ER K NLMVFIRP IIR R+L+ +Y R +L Sbjct: 606 ALFRSTARERKKTNLMVFIRPRIIRSSADARNLTAPRYDYMRNLPPMTTPDGDNSL 661 >UniRef50_C5CPK3 General secretion pathway protein D n=1 Tax=Variovorax paradoxus S110 RepID=C5CPK3_VARPS Length = 774 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 199/703 (28%), Positives = 322/703 (45%), Gaps = 75/703 (10%) Query: 9 CCLLAALLMPCAGHA--ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 L AA + +G A E NF NADI + G+ +++DP V+GT+++ + Sbjct: 26 TLLQAAPVFAQSGDAPRRGEPITLNFANADIEAVARTMAVVTGRDVVVDPRVKGTMNLVT 85 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMI---ADSSRPGVGD 123 + + + F S L L G++V+ + G KVV A+ K + S+ G+ Sbjct: 86 DRAIAPAAAFNQFASALRLQGFAVVEAE-GLYKVVPEADAKLQTQTVNTATPSAGSVAGN 144 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 ++VT+I L L P+LR ++ + NV +N L++T A + +L +I Sbjct: 145 QIVTQIFRLNYESPNSLLPVLRPLIPPNNTINV--NPGNNSLVITDYADNMRRLARIIAA 202 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESH--------GKSQMPALLSAKIVADKR 235 +DV ++I L+++ A D+ ++ +L+ S A ++AD R Sbjct: 203 LDVPNASDIEVIPLKHSIATDMLPLITRLVDGSGSGATPGAPAPGVADASFRTTLLADPR 262 Query: 236 TNSLIISGPEKARQR-ITSLLKSLDVEESEE-----GNTRVYYLKYAKATNLVE------ 283 +N+LI+ AR + +L++ LD +E GN V YLK A A L Sbjct: 263 SNALILRAANPARAALVRTLVEKLDRAPAESSNGAAGNIYVVYLKNADAVRLAATLRAAM 322 Query: 284 ---------------------------VLTGVSEKLKDEKGNARKPSSSG------AMDN 310 + + + +G +++ Sbjct: 323 AANQLPGTPGAPGAAGGGGAPQQQQANIPQAMQQTSLSGQGGGSAAANAPLNNANQPSTG 382 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 I AD TNSL+ITA + ++ VI +LD RRAQV++EA+IVEV N GVQW Sbjct: 383 GQIQADPSTNSLIITAPEPQYRQMRAVIDKLDGRRAQVMIEALIVEVSAKKAANFGVQWQ 442 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + + + + P+ + G G + G + Sbjct: 443 SALGNNAVIGTNSSLASANILALTQALATRDVANVRPSSGLNLGIAGKIGGQYI--LGAI 500 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD----NVFNTVERKT 486 S+ ++L+TP+++TLDN+ A +GQ+VP ++G ++ N F TVERK Sbjct: 501 ANFFNSDGDANVLSTPNLLTLDNEEAKIVIGQNVPFVTGQYASTSGSVGINPFTTVERKD 560 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-NSTLGPTFNTRTIQNAVLVKTGETVVL 545 VG L+V P +NE V + I QE S+VD ++ N+ GPT N R+I+++VLV+ G V+L Sbjct: 561 VGLTLRVRPTINENGTVKMTIFQETSTVDGNTINNPNGPTTNKRSIESSVLVEDGGLVML 620 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGLL D + KVP+ GDIP++G LF+ R K NLM+F+RP ++RD + + Sbjct: 621 GGLLSDDYGNTIEKVPVAGDIPVLGNLFKNEIRTRNKSNLMMFLRPAVMRDGASTEAFAY 680 Query: 606 EKYTRYRQEQQQRIDG-KSKALVGSEDLPVLDENTFNSHAPAP 647 ++Y R QQ+ + L G + PVL E AP P Sbjct: 681 DRYDEIRGMQQRTQPNTDNIMLRGVDAAPVLPE------APLP 717 >UniRef50_Q1YQU4 Putative general secretion pathway protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQU4_9GAMM Length = 629 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 200/636 (31%), Positives = 323/636 (50%), Gaps = 33/636 (5%) Query: 2 KGLNKITCCLLAALLMPCAGHAE---NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSV 58 + K LL AL + + AE E NF +ADIR +E V + GK+ ++DP V Sbjct: 6 QTFAKRIIRLLGALSIVLSMIAEISAGEVVRINFRDADIRSVIESVAEITGKSFVLDPRV 65 Query: 59 QGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSR 118 +G +++ + + Y+ LS + + G+ I D ++V G D+ Sbjct: 66 KGKVTIIAPEAIDSDLLYEAVLSAIQVQGFQAIE-DGAVTRIVPFTQAFNFAGGAGDN-- 122 Query: 119 PGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLI 178 L+T+++ +E+V L P+L+ +M +G+ N + SN +++T S I +L Sbjct: 123 -----RLITKVIQIEHVQVATLVPVLKPVMSSGARLN--AFTQSNSMVVTDVQSNILRLE 175 Query: 179 EVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS 238 +I +D ++I L+ SA + I G+ + +V D N Sbjct: 176 SLIADLDDPTLNAVEVIRLKNISAGEAVYI--------AGQLKQLKNQDLSLVEDGMNNR 227 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 +IISG AR+ ++LK+LD +++G+ V YL Y++A + ++ G+ + + Sbjct: 228 VIISGTASARRAFKAMLKTLDQPSTKKGSVEVIYLDYSRAAEMKPIVEGMLQSDVFLQLA 287 Query: 299 ARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 + A I DE N+LV+ A +V ++ V+A+LD R QVL+EA+I E+ Sbjct: 288 GEAVADKKAKAAYQIQIDELNNALVVAAPTAVIREIKNVVAQLDRSRPQVLIEAVIAELS 347 Query: 359 DGNGLNLGVQ--WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 + L Q +++KN G GL G++ + P A Sbjct: 348 EDQAQELSSQLAYSSKNRGGYLTNFDGLLATLTGLGISGVEPTAAELGLLP--KKVMAVA 405 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS-- 474 G G+L+ AL ++ IL+TPS+VTLDN+ A+ +VG++VP +GS T+S Sbjct: 406 GDFDSETGKGIGLLIQALKTDGSTKILSTPSVVTLDNEEATLSVGEEVPFQTGSFTSSNN 465 Query: 475 -GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQN 533 +N F T+ R+ VG KLKV PQ+++GD+V LEIEQE S V S T + T+Q Sbjct: 466 GSNNPFTTINREEVGVKLKVKPQISKGDSVRLEIEQESSKVKSGVPGLQ--TTSKSTMQT 523 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 VL++ GE ++LGGL++D + +KVPLLGDIPL+G+LFR TS ++ LM+FIRPTI Sbjct: 524 NVLIQDGELLILGGLIEDQTGGSATKVPLLGDIPLLGRLFRSTSKADSQSVLMMFIRPTI 583 Query: 594 IRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGS 629 IR + R LS KY+ ++ +D K L+ Sbjct: 584 IRTAEDARKLSGSKYSHL---IKRDMDSKESGLIQP 616 >UniRef50_D0XKD9 General secretion pathway protein D n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XKD9_9CAUL Length = 688 Score = 430 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 188/694 (27%), Positives = 320/694 (46%), Gaps = 78/694 (11%) Query: 7 ITCCLLAALLMPCAGHAEN------------EQYGANFNNADIRQFVEIVGQHLGKTILI 54 + ++A + P + A + N ADI+ E V + G+T+++ Sbjct: 13 LALTMVAGPVAPVSMAATTGGQTGAPPPVAMQDVVINMRGADIKDVAEQVSRITGRTLVL 72 Query: 55 DPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIA 114 DP VQG ++V S + S+ ++ FLS+L G++ + N ++V A V S + Sbjct: 73 DPQVQGQVNVVSAEPLSRNGVWELFLSVLRTSGFAAVRSGN-VWRIVPQATVVQSGA--S 129 Query: 115 DSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTI 174 ++ +++TR++ L N+P+ LR ++ S G + N +++T A I Sbjct: 130 ETGAAVSNQQIITRLIRLRNLPSDQAVRALRPLVS--SFGAIEPITEPNGVVVTDYAENI 187 Query: 175 NKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADK 234 ++ ++ +D G + I L YA+A ++A + L+ G ++ AD+ Sbjct: 188 RRVQQLASTLDSGGGSSFESIALRYANAGEVATSVGALLGSDAG--------GPRVTADE 239 Query: 235 RTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKD 294 R+N L+I G + S++ +LD TRV L+ + A ++ E++ G+ Sbjct: 240 RSNVLLIRGDAADLAQARSIVAALDTPGGATPVTRVVRLRNSDAESITEIVRGLLGGEPS 299 Query: 295 --------------------------------------------EKGNARKPSSSGAMDN 310 R P++S ++ Sbjct: 300 ATNPVARSLRQDTGLASLSANNRDVAAQAASAISSSGEGAATSLPSSAPRSPAASFTLEG 359 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 V + A + N++V+ + E L +I++LD+RRAQV +E IVE+ G +GVQ Sbjct: 360 VTVQASPELNAVVMRGPPATVEMLQDLISQLDLRRAQVKIEVAIVEITGELGEQIGVQLG 419 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 G N + G PA + +AAG G++G+L Sbjct: 420 LGGAVPDDGVIGGTSFSNGGSDLGTVLSALGY----PAGRLLGQGLSLAAG-SEGEFGLL 474 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--NVFNTVERKTVG 488 L AL +N+ ++L++PS+ LDN+ A VGQ+VP +GS T G+ N F T+ R+ VG Sbjct: 475 LQALGTNSAANLLSSPSVTVLDNQPAEIVVGQNVPFRTGSFATDGNSTNPFTTISREDVG 534 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSS-VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGG 547 L+V P+V+EGD V L++ QEVSS V ++ N R+IQ +VL GET+VLGG Sbjct: 535 LTLRVIPRVHEGDVVKLDVSQEVSSLVTTNITGAADLITNRRSIQTSVLANDGETIVLGG 594 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 L+ D S+VP L +P+VG FR + +R L +F++PTI+R DD + ++E Sbjct: 595 LVTDDRMSNNSRVPGLSSLPVVGNAFRSRRDSQTRRTLFIFLKPTILRTDDDVAASARES 654 Query: 608 YTRYRQEQQQRIDG-KSKALVGSEDLPVLDENTF 640 + R R + RID + + LP ++ F Sbjct: 655 FDRLRANEPVRIDPTRPPPIARDPRLPPEVDDVF 688 >UniRef50_Q6MMM9 General secretion pathway protein D n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MMM9_BDEBA Length = 765 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 159/626 (25%), Positives = 297/626 (47%), Gaps = 51/626 (8%) Query: 29 GANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGY 88 +F N +I + + + GK +IDP V+G I++ + + E Y+ FLS L + G+ Sbjct: 104 SFDFPNVEISDIIRAISELTGKNFIIDPGVRGKITIIAPTKITVSEAYKAFLSALAINGF 163 Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 +V+ FLKV + N + + D+++TRI+ L+++ A + LR + Sbjct: 164 TVVPSG-SFLKVKSARNAQRDNIETFSGAYYPNADQMITRIIHLKHISASQVNRDLRILP 222 Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG-TEKQQIIHLEYASAEDLAE 207 N+ YEP+N +I++ S I++++++I ++DV G E+ ++I ++YA ++DLA+ Sbjct: 223 SKDGEMNI--YEPTNSIIISDYGSNIDRVMKIISQLDVPGFEEQLEVIPVKYAKSKDLAD 280 Query: 208 ILNQL---------------------ISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 +++++ S S G + + D RTNS+I+ G + Sbjct: 281 LVDKIVNKGNKTQGSAPGTFTAGVPRFSRSAGATSQQGASFFMAIPDDRTNSIIVVGNKS 340 Query: 247 ARQRITSLLKSLDV--EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS 304 RI L+ LD E G VY +++ A + + L GV++ + S Sbjct: 341 GIVRIKKLISQLDFKIRAEESGGVYVYNVRHGDAEKIAQTLQGVTKDAAPKPATGGSLLS 400 Query: 305 SGAM-----------DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 +V ITAD+ TNSL++TA + + + +++++D R QV VEAI Sbjct: 401 PLGSQGMQAPQEIFGGDVKITADKTTNSLIVTASKQDYDVVLNILSKIDTPRDQVFVEAI 460 Query: 354 IVEVQDGNGLNLGV---QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWD 410 I+E+ +G + G+ Q+ + G F + N ++ +G + Sbjct: 461 IMEMSVNDGNSWGIGYYQYGDSGYGKVGFNG----LSNINDFLSPTGGSGAVIGFGQGKT 516 Query: 411 MFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS 470 + + L + K +IL+TP ++TLDN+ VG V V Sbjct: 517 VEVTDPVSKTTLKIPSLLGFINFLKTAKKANILSTPQLMTLDNQEGELEVGDKVVVGENV 576 Query: 471 Q-TTSGDNVFNTVERKTVGTKLKVTPQVNE-GDAVLLEIEQEVSSVDSSSNS----TLGP 524 Q + T + + KL + P ++ + + +EI+Q+V+ + ++S Sbjct: 577 QNVGTSGTTVRTPQFEDATIKLAIKPFISPASNQIRMEIKQQVAQLSTASTPKAFQDSTQ 636 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 R+++ + V G+TVVLGGL+ + +E V+KVPLLGDIP++G LF+ + + K N Sbjct: 637 PLAKRSLKTVINVNNGDTVVLGGLMKEQDQESVTKVPLLGDIPIIGWLFKSRTIVKDKTN 696 Query: 585 LMVFIRPTIIRDDDVYRSLSKEKYTR 610 ++VF+ P I+R++ ++ +K Sbjct: 697 MVVFLTPKIVRNNIEANAIVSKKLDE 722 >UniRef50_A0YBF4 Type II and III secretion system protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBF4_9GAMM Length = 617 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 201/632 (31%), Positives = 350/632 (55%), Gaps = 39/632 (6%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 + + E N +ADI ++ + + K I++DP V+ +++ +N + + + Sbjct: 19 IQTPTPSTEELLTINMRDADIGSVIQWIAEQTNKKIVVDPRVRAKVTILANKGMTANQAF 78 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 + FL++LD+YGY+V G L++ + K+SP + ++ G E + + ENV Sbjct: 79 EVFLAMLDVYGYAVTETG-GILRIFPAVQAKSSPKQLVENFSALGGGEQILYVFKAENVS 137 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 A L +L+ ++ S G + Y SN LI+ A + +L+ +++++D G+ ++I+ Sbjct: 138 ANRLLEVLKPLLP--SSGYIAAYPQSNSLIIADEAENVKRLVALVRKIDASGSIDIEVIN 195 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 L +A AE+++ ++ L+S++ G++ I D R+NSL++SG +R+ L+K Sbjct: 196 LLHADAENVSGLVLSLLSDTTGET-------FSIAPDIRSNSLLMSGDAATTRRVRQLVK 248 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITAD 316 LD S+ GNTRV YL Y +A ++ +L G+ +++ NA S +++I A Sbjct: 249 QLDQPISDNGNTRVVYLHYLEAKEVLPILKGMGAAMQENNRNAGDSS------DISIEAS 302 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA 376 E +N+LV+TA S+ + ++ VI ++DIRRA +LVEAIIVEV +GV+W Sbjct: 303 ESSNALVMTAPPSMLDVMSRVIEQIDIRRASILVEAIIVEVSKDFSQTIGVEW------- 355 Query: 377 QQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF-NGDWGVLLTALA 435 NT L + A+ + ++ G+ + + + + G+ GF+ NG VL A+A Sbjct: 356 ----NTSLSANDGAEALTNF----GLRNIDESGAVSLLGAGLNLGFYRNGSLRVLAQAIA 407 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVL---SGSQTTSGDNVFNTVERKTVGTKLK 492 + N +IL++P I+T+DN+ A VG +VP + S ++S + F T+ER +G LK Sbjct: 408 NENDANILSSPRIMTMDNEEAEILVGSNVPFITGQSTGSSSSTGDPFTTIERHDIGLTLK 467 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDF 552 +TPQ+NEGD++ L+I QEV ++ ++ N R+I+ V+V+ +VLGGL+ D Sbjct: 468 ITPQINEGDSITLDILQEVETISEATTVANDIVTNKRSIKTKVIVEDDAILVLGGLVSDD 527 Query: 553 SKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 ++E VSKVP LGD+PL+G LFR T+ K+NLMVFI P I+ D + ++S++ Y + Sbjct: 528 TQELVSKVPFLGDLPLLGGLFRTTTDTVVKKNLMVFIHPVIVDSDQISDNVSRKNYDLMK 587 Query: 613 QEQQQRIDGKSKALVGSEDLPVLDENTFNSHA 644 Q++ GK +D + D N F Sbjct: 588 SLQEKYNTGK----FSVDDTALPDFNQFKPQE 615 >UniRef50_Q1D9E0 General secretion pathway protein D n=2 Tax=Cystobacterineae RepID=Q1D9E0_MYXXD Length = 863 Score = 427 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 192/712 (26%), Positives = 324/712 (45%), Gaps = 94/712 (13%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSND----TFSQQ 73 C N +YG F+ +I + V+ V +T ++ +V+G IS+ + + Sbjct: 58 TCEEARRNARYGIYFDKVEIEKLVQTVADATCRTFILPENVRGKISIIGPENGRVEVNAD 117 Query: 74 EYYQFFLSILDLYGYSVITLDNGFLKVV--RSANVKTSPGMIADSSRPGVGDELVTRIVP 131 +Y FL+ LD G + F+K+V RSA P ++ + +++VT++ Sbjct: 118 AFYSAFLAALDANGLAAYQYGR-FMKIVDKRSAKQNPIPTIVEEGEPYTTNEQMVTKLFR 176 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV-IGTE 190 ++NV L +L+Q++ G+ + Y P + +I+ S I++L +I ++D ++ Sbjct: 177 VQNVEVEPLRGVLQQLVSKD--GDTIPYPP-DTIIINDVGSNIHRLERIIHQLDTRAASD 233 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLS----------------------- 227 + +II ++YASA+D+A + +L + PA Sbjct: 234 EMRIIQVQYASAQDVANTVQRLFEAKGARPGQPAAAGRNVPPAAAQATPQAGQGQEGATG 293 Query: 228 -----AKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 ++I+ D+RTN LII A +RI ++ +D+ S G VYYL+ A A L Sbjct: 294 GPVTLSQIIPDERTNKLIIVASPAAFERIQDIVGQIDIPTSGGGRINVYYLENANAEELA 353 Query: 283 EVLTGVSEKLKDEKGN-----ARKPSSSGAM----------DNVAITADEQTNSLVITAD 327 L +++ + AR P + G V I+AD+ +NSLVI A Sbjct: 354 STLQSLAQGTGNAPRGRTPVPARPPGAPGGPTTTQAAELFSGEVKISADKGSNSLVIVAS 413 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIF 387 + + + VI +LD R QV VEA+I+EV LG+ + + + + Sbjct: 414 SADYKNIVQVIQQLDKPRRQVFVEAVIMEVNLDRNARLGMNLHSGFSLSTSNGDQVPGLI 473 Query: 388 NAAQGVADYKKNGGITSANPAWDMFSAYNGMAA----GFFNGDWGVLLTALASNNKNDIL 443 + +TS + G +GV+L A+ ++ ++L Sbjct: 474 GTNTSGQGLPPSLSLTSLASYGGFLAGIQGPVIPALEKLGIPAFGVVLHAMQQSSDVNVL 533 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT---------------------- 481 +TP I+T DN+ A VGQ+VP SG TS ++ Sbjct: 534 STPHILTSDNEEAEITVGQNVPFQSGFNPTSLGSLGAGVGGGAGALGGGLLGGLGGLGSL 593 Query: 482 ---VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 + R+ V KL V PQ+NE D + L I Q+ + +S++ LGPT + R+ + V+ + Sbjct: 594 YAPITRQNVELKLTVKPQINESDYIRLVINQQTEEI-ASTDPVLGPTTSRRSAKTTVIAR 652 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 ET+V+GG++ D + E VSKVPLLGDIPL+G LFR T+ + K NL++F+ P IIR + Sbjct: 653 DQETLVIGGIMQDRTLESVSKVPLLGDIPLLGHLFRDTTRRKTKTNLLLFLTPYIIRGPE 712 Query: 599 VYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAPSSR 650 +R + + K RQ+ ++ G+ +P D S P P SR Sbjct: 713 DFRVIFERKMKE-RQQFVEQFYGQ---------VPGYDVAVDFSRKPGPLSR 754 >UniRef50_A3W186 General secretion pathway protein D n=1 Tax=Roseovarius sp. 217 RepID=A3W186_9RHOB Length = 648 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 173/640 (27%), Positives = 307/640 (47%), Gaps = 35/640 (5%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 M ++ ++ L P A+ + +A +R FV+IV Q G+ ++D VQG Sbjct: 1 MHFHKRLALLVMLWLAWPGLLAAQ---VSLDLRDASLRDFVQIVAQSTGRNFILDERVQG 57 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 +++V + + S Y+ FL++L+L +++ ++V + + +R Sbjct: 58 SVTVVAPNQVSPSAIYEIFLNVLELNRLTIVEGAETD-RIVPIDLAR---ELAPGDARAR 113 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 +G + TR+ P+ N ++A ++R ++ A +V + V S ++IL+ R +++++ Sbjct: 114 LGGDFETRVFPVRNSSVDEIAEVIRPLLPAEAVLSTV--PESGLMILSDRRENFQRIVQL 171 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 + R+D + I L A ++ ++ L G S + AD R+N+LI Sbjct: 172 VDRLDTPSRNSIETIPLRNGKAAEMLSVITALAITPQGSS---------LSADPRSNALI 222 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 +SG + R R+ ++ LD + T V +L YA AT+L +V+ + + + Sbjct: 223 VSGTPEFRDRVRDVVSELDRPQ-RSIATEVVHLNYANATDLADVIR---QSFGAPEASTE 278 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 + + + I A+EQ N+L+ITA + + LD R QVL+EA+I E+ Sbjct: 279 GAAPTAVPGGITIVAEEQQNALIITAPTDRIASITGAVRGLDQRPDQVLIEAVIFELSVE 338 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 + +L Q+ GA T G+ + + + P G A Sbjct: 339 SFSDLSFQFGGVIDGA---TVGGVEFALQGRPTLTSLVSTVLAGNAPTGG---GTGGSIA 392 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN--- 477 F G L ALAS + +L+TPSI+TL+N+ A V Q+VP ++GS +T GD+ Sbjct: 393 AFDKSGIGGFLAALASKSSTKLLSTPSILTLNNREAEIVVAQNVPFVTGSFSTVGDSAVP 452 Query: 478 --VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAV 535 F T++R+ VG L VTPQ+ V LEI QEVS++ +++++ G + R + V Sbjct: 453 NQPFQTIQRQDVGLTLTVTPQITRDKTVRLEINQEVSNLTNAASAAGGEITSKRELSTNV 512 Query: 536 LVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 LV+ G ++LGGLL++ S +VP L ++PL+G+LF+ S +R L+V +RP I+ Sbjct: 513 LVRDGHVIMLGGLLENGSGSVNQRVPGLSELPLLGRLFKGRSVNENQRILLVMLRPRILS 572 Query: 596 DDDVYRSLSKEKYTRYRQEQ--QQRIDGKSKALVGSEDLP 633 D+ R L+K ++ D + V P Sbjct: 573 SDEEARELTKRLAREAKRAADYIAPADDGTYPRVPDSSFP 612 >UniRef50_C1SHL2 General secretion pathway protein D n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHL2_9BACT Length = 616 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 161/612 (26%), Positives = 300/612 (49%), Gaps = 29/612 (4%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDP-SVQGTISVRSND 68 + L+ + + NF + ++++FV V + G+ + D ++G +S+ S+ Sbjct: 6 VMFLLYLLAFSSFVYAAEINVNFRDMEMQEFVSFVSEFTGRNFVYDKKDLKGQVSIESSS 65 Query: 69 TFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTR 128 + + F S L G ++ ++++VR +++ IADS G G+ L+T Sbjct: 66 EMGTDDIMEIFASTLRANGLELVDRG-TYVEIVRQSDISD----IADSDGVGDGNALITT 120 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD-VI 187 I+ N A LA L ++ G V + N +++ R I KL +++++++ Sbjct: 121 ILTSHNYDASLLAGTLIKLKSKA--GYVDVLKGLNAIVIRDRIDRITKLKKLMEKLEMKA 178 Query: 188 GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 I+ +E+ASA ++ L +L S+ K M IVAD +N L+++ E+ Sbjct: 179 AGYTIHIVKVEHASASEMESTLKKLYSDLQKK--MMVANDPVIVADDYSNLLVVACAERD 236 Query: 248 RQRITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 ++I+ ++ +D S+ +V+YL A A ++ +VL+ ++ ++KG S+S Sbjct: 237 FEKISYVISQIDSPIPSDHNAPKVFYLNNANAEDVEKVLSKLTGVENEDKGKKASNSTS- 295 Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 + D TNS+++ + K+ +I +LD R QV VEA+I+E NG + G Sbjct: 296 -----TVAFDAATNSIIVFGSPDLYSKVEGLIEKLDRPREQVYVEALIIETSIENGSDFG 350 Query: 367 VQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA------ 420 V+W VGA + G + + G ++ + +P + S+ + Sbjct: 351 VEWQ---VGAGNDSQAGTIGYLGSDGALTSFQSSVLDGDSPNFGALSSGFNLGILGDIVT 407 Query: 421 --GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV 478 G G+L + + + +IL+ P I+TLDN+ A VG++ P L+ ++ S +N Sbjct: 408 YEGVSFPTLGILANFVKTASGINILSNPQILTLDNEEAEIFVGENRPFLTSTKYDSNNNP 467 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 + + + VG KL + PQ++ D + L+IEQEV V ++ + P TR+ + V +K Sbjct: 468 VQSYDYRDVGVKLNIVPQISSNDTITLKIEQEVKKVSGATADVVAPVTLTRSTKTKVKLK 527 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 G +V+ GLL D S+ S VP L IP++G LF+ ++ K N+MVFI +IIR + Sbjct: 528 DGAIMVISGLLKDDSETYNSSVPWLSSIPVIGWLFKNKNSSSEKTNMMVFISTSIIRTQE 587 Query: 599 VYRSLSKEKYTR 610 + L+++K Sbjct: 588 DAKKLTEKKQNE 599 >UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6E1_9BACT Length = 668 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 154/610 (25%), Positives = 291/610 (47%), Gaps = 41/610 (6%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQ 72 L A E NF++A+I+ V+++ G+ L ++D V G +++ ++ + Sbjct: 83 PALYKPAYTGEKIDIALNFDDAEIKDVVQVILGEILNVNYVLDKRVGGKVNLHASGEVYK 142 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSR-PGVGDELVTRIVP 131 +E S+L +Y ++ I D V+ A + +I + P +++ +IVP Sbjct: 143 EELISMLNSLLYVYNFT-ILKDGNLYNVLPQAEARRETSIIIHGDKIPEWSKDIIIQIVP 201 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GT 189 L+ + L+ ++Q M S+GN+V +E L++ AS + KL+ +IK DV Sbjct: 202 LKYADPKKLSSTVKQFMS--SIGNIVTHEDFPYLMIIDNASVMEKLLTIIKIFDVPFLAG 259 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP-EKAR 248 + + +Y A ++++ L L K +D TN LI+ + Sbjct: 260 KAMRFYEFKYVDARNMSKDLGSLAKSLGAKVGGDGEFDFVPFSD--TNKLIVITKLPELL 317 Query: 249 QRITSLLKSLDVEES---EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS 305 +I +K++DV + EE +Y +++ KA +V ++T + ++ K Sbjct: 318 PKIDMWIKNIDVPPTQLDEEMRVYIYKVQHQKAETIVPIIT---QMYSEKMAAQPKKLGR 374 Query: 306 GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 ++++ + AD +TNS+++ S + + +I +D QV +E +IVEV + L+ Sbjct: 375 DIVESMKVLADTETNSVIMKTFPSDYKSIKAIIEAIDATPQQVFIEVLIVEVTRNDTLDY 434 Query: 366 GVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 G +W Q + GV D + G + F G Sbjct: 435 GTEWLWSGSNLQVY------------GVGDIARAAGNAAVQ-----------FTNTFAKG 471 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN-VFNTVER 484 + +L+ LA+++ IL+ P I+ D + AS VG++VP+L+ S +G F V+ Sbjct: 472 SFEILIDILATSSNAKILSAPHILVRDEQPASIQVGEEVPILTSSGQQTGTTITFEQVQY 531 Query: 485 KTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETV 543 + G L VTP + E + LE+ QEVS+ + PTF+TR +Q ++++K+G T+ Sbjct: 532 RDTGIILTVTPHIAENGLITLEVNQEVSNAKLTDTGVEKSPTFSTRQVQTSLVIKSGHTI 591 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 LGG+++ ++++V K+PLLGDIP +G LF+ TS + L++ I P I + + SL Sbjct: 592 GLGGIIEQKNEKEVKKIPLLGDIPYLGNLFKATSLIDKRTELIMLITPYIANNAEDADSL 651 Query: 604 SKEKYTRYRQ 613 ++ + ++ Sbjct: 652 TQAFEKKLQE 661 >UniRef50_C6C305 General secretion pathway protein D n=1 Tax=Dickeya dadantii Ech703 RepID=C6C305_DICDC Length = 714 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 267/699 (38%), Positives = 382/699 (54%), Gaps = 99/699 (14%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 KG+ K L L+ + ++ + ++ A+F DI++F+ V ++L KT++IDP+V+GT Sbjct: 4 KGIMKRWGWLGLTALLISSTYSWSAEFSASFKGTDIQEFINTVSKNLNKTVIIDPTVRGT 63 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFL----------------------- 98 I+VRS D ++++YYQFFLS+LD+YG+SV+ +DNG L Sbjct: 64 ITVRSYDMMNEEQYYQFFLSVLDVYGFSVVPMDNGVLKVIRSKDAKSSSIPVANDEQPGV 123 Query: 99 ------KVVRSANVKT---SPGMIADSSRPGVGD-----------------------ELV 126 +VV NV +P + + G G E+V Sbjct: 124 GDELVTRVVPLNNVAARDLAPLLRQLNDNAGAGSVVHYEPSNVLLMTGRAAVVKRLMEIV 183 Query: 127 TRI----------VPLENVPARDLAPLLRQM--------MDAGSVGNVVHYEPSNVLILT 168 + + +PL A D+A L+ + + + V NVV +N ++++ Sbjct: 184 STVDKTGDRNVVTIPLTYASADDVAKLVNDLNKTDEKNALPSTMVANVVADSRTNSVVVS 243 Query: 169 GRASTINKLIEVIKRVDVIG--TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALL 226 G + +++E+I ++D ++I+L+YA A DL E+L +G S Sbjct: 244 GEDNARQRVVEMIHQLDRKQVVQGGTKVIYLKYAKALDLIEVL-----AGNGTSGNRNSS 298 Query: 227 SAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT 286 S + R S + S + Sbjct: 299 STNNR--------------SSSTRSGSSSSNSSSSSSSSSSNSSSSSNAGNGAYSSSGSG 344 Query: 287 GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 ++ + V + A +QTNSL+ITA + L VI +LDIRR Sbjct: 345 MGFGSTFGSSSSSGGRTIIIQGKEVIMRAHDQTNSLIITAPPDIMRDLEQVINQLDIRRP 404 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QVLVEAII EVQD +GLNLG+QWANK G Q+TNTG+PI A GV Y+ +G +TS Sbjct: 405 QVLVEAIIAEVQDADGLNLGIQWANKRAGMTQYTNTGMPISTAIVGVDQYRDDGTLTSNF 464 Query: 407 PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 ++NG+AAGF++G+W +LLTAL+SN+KND+LATPSIVT+DN A+FNVGQ+VPV Sbjct: 465 S--SALGSFNGIAAGFYHGNWSMLLTALSSNSKNDVLATPSIVTIDNMEATFNVGQEVPV 522 Query: 467 LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE---VSSVDSSSNSTLG 523 L+GSQTTS DN+++TVERKTVG KLKV PQ+NEGD+VLL+IEQE V+ SS++S LG Sbjct: 523 LTGSQTTSADNIYSTVERKTVGIKLKVKPQINEGDSVLLQIEQEVSSVADSSSSTSSDLG 582 Query: 524 PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKR 583 TFNTRT+ NAV+V GETVV+GGLL+ + E SKVPLLGDIP++G LFR S +KR Sbjct: 583 ATFNTRTVNNAVMVTNGETVVVGGLLNKSTVETDSKVPLLGDIPVLGNLFRSKSLTVSKR 642 Query: 584 NLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGK 622 NLM+F+RPTIIRD Y++ S +Y + EQ + K Sbjct: 643 NLMLFLRPTIIRDRQQYQATSINQYKAFDSEQDLQRSNK 681 >UniRef50_Q5ZVW8 Type II protein secretion LspD n=7 Tax=Legionella RepID=Q5ZVW8_LEGPH Length = 791 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 201/679 (29%), Positives = 329/679 (48%), Gaps = 100/679 (14%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 N NADIR + V + GK +IDP VQG +S+ S+ S +E YQ FLS+L + GY+ Sbjct: 136 NLRNADIRAVIAEVSRITGKNFVIDPRVQGKVSIVSSTPLSSRELYQVFLSVLQVSGYAA 195 Query: 91 ITLDNGFLKVVRSANVKT-SPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMD 149 I +K++ + + KT SP +++ P GD+++ ++P+ VP+ L P+LR +M Sbjct: 196 IPNGE-IIKIIPNIDAKTQSPDLLSGMKSPPRGDDMMVAVIPVHYVPSEQLVPVLRPLMP 254 Query: 150 AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEIL 209 S +V Y PSN+LIL+GRA+ I L E+IK+VD ++ L +A A D+A L Sbjct: 255 QWS--SVSAYAPSNMLILSGRANNIKSLAEIIKQVDSSSANGIDMVRLHHALAMDVANTL 312 Query: 210 NQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE--EGN 267 L+ G + + I AD R+NS+++SG + R R+ L+ LD + S N Sbjct: 313 KDLVKTQPG---IGSRTQITIAADDRSNSILVSGSKTDRIRLRMLILKLDKDSSTGVNSN 369 Query: 268 TRVYYLKYAKATNLVEVLTGVSEKL----------------------------------- 292 T+V YL Y +A +LV +L G+++ Sbjct: 370 TQVVYLNYLRAEDLVPILAGIAQANFSGNVGTTIGTITRPALDSTNPASSLANTSADGQS 429 Query: 293 ------------------KDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKL 334 +A + V I + TNS+++ A S+ L Sbjct: 430 SSLSSTSTSSAPMNASGATANTTSASTQNEGSTKPTVQIIGEPNTNSIILNAPASIIRIL 489 Query: 335 ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVA 394 TVI++LDI+ AQ+L+EA++ EV + + NLG++W + Sbjct: 490 KTVISQLDIKPAQLLIEALVAEVDEKDVNNLGIEWGSN---------------------- 527 Query: 395 DYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNK 454 ++ G P + + ++ + D+ + ALA + +IL+TPS+V LDN+ Sbjct: 528 --QQTGNPKDFRPGFAIINSKTRI------DDFQAQIYALAREQRANILSTPSVVVLDNR 579 Query: 455 LASFNVGQDVPVLSGSQT-----TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQ 509 A +G+ V + + S T+ + F T +R V L V PQ+ G + L+I+Q Sbjct: 580 QAKILIGKQVSIATTSYPNNAGGTTTASPFTTFDRVNVALHLYVRPQITRGQGIQLQIDQ 639 Query: 510 EVSSVD---SSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 ++D +++++T PTFN +I +V V++G+ VVLGGL+ D +K+P+LGDI Sbjct: 640 GNDTLDPATATTDNTTTPTFNISSIVTSVHVESGDIVVLGGLIQDSIGNDNNKLPILGDI 699 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 P +G+LF+ R KR LMVFI+P I+R++ ++ EKY RQ Q I + Sbjct: 700 PGIGRLFQRNIRNRDKRVLMVFIKPIILRNERDNLHVTGEKYNYVRQYQLDWIRSQEAFE 759 Query: 627 VGSEDLPVLDENTFNSHAP 645 ++ + N P Sbjct: 760 QTDDETVLPPLTQGNLPVP 778 >UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C127_HYPNA Length = 653 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 184/643 (28%), Positives = 310/643 (48%), Gaps = 33/643 (5%) Query: 2 KGLNKITCCLLAALLMPCAGHA-ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQ- 59 + L L A+ A +++ N + ++ +E + G T + P V+ Sbjct: 4 RILFAAVAALSASQFATAQAPAPSQDKHVLNLEDVELNTLIEDISMLTGYTFITHPDVRR 63 Query: 60 GTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 +SV S + E +Q FL+ L + G++ + ++V A T M Sbjct: 64 AKVSVISQTPMTTTELFQVFLTTLRIQGFAAVPAGKDTYRIVPRAIASTEAPMSGPG--- 120 Query: 120 GVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 + VT ++ L+ A + A +++ ++D + G VV +N L++ AS + ++ Sbjct: 121 --PNAFVTEVIKLDRANAMEAAQMIKPLLD--AQGQVVANAGTNTLVVVDYASNLERVRR 176 Query: 180 VIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISE-SHGKSQMPALLSAKIVADKRTNS 238 +I+ +D T + + L A ++ +L +L + S + Q P+ LSA VA +NS Sbjct: 177 IIETLDRDQTV-TETVPLTNVPAVEIETVLTRLQGDPSAQQGQAPSRLSA--VASLTSNS 233 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 +I+ G + +R + LD + + RV L YA A +V +L V+ + ++ Sbjct: 234 IILRGDATSVERAKRVALELDATNPQRDHVRVITLNYADAEEVVPILERVANSMAMQRAP 293 Query: 299 ARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 + A I TNSL+I+A+ + V+ LD+RR QV+VEAIIVE+ Sbjct: 294 SET-----APVAQTIAHHGPTNSLIISANPETILAMERVVTALDVRRPQVMVEAIIVEMS 348 Query: 359 DGNGLNLGVQWANKNVGA-----QQFTNTGLPIFNAAQGVADYKKNGGITSANP----AW 409 D LG+Q+ G + P A G + NP A Sbjct: 349 DDAARELGLQFLLAGTGGDVPFASTNFSRAAPNLLALTGALVTDAFEDPAAENPFREAAI 408 Query: 410 DMFSAYNGMAAGFFNGD----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP 465 + +G+ GF +GV+L A+ + + IL+TP +TL+N ++ VGQ++P Sbjct: 409 SSLTGSSGLTLGFGGTSGDNLFGVILNAVEDDTASRILSTPFGMTLNNATSALIVGQEIP 468 Query: 466 VLSGSQTT-SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGP 524 V +G + N F TVERK +G +L+VTP++ E D V L+I QEVSSV S + Sbjct: 469 VTTGQVLGEANSNPFRTVERKDIGIQLEVTPRIGENDTVRLDIRQEVSSVFGSVGTVTPD 528 Query: 525 TF-NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKR 583 + R I+ +VL GE +VLGGL++ + +KVP+LGDIP VG+LFR +R Sbjct: 529 LILDKREIRASVLADDGEIIVLGGLVEQTDTLRDTKVPVLGDIPGVGRLFRSEGKAATRR 588 Query: 584 NLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 NLMVFIRPTI+R+ ++++++KY + E+ R + ++ Sbjct: 589 NLMVFIRPTIVRNKADAQAVTQQKYLYVQAEELMREQSPAGSI 631 >UniRef50_C5S7Y5 General secretion pathway protein D n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7Y5_CHRVI Length = 733 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 159/650 (24%), Positives = 294/650 (45%), Gaps = 68/650 (10%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 + P A NF+ DIR+ V+++ G L ++ P+VQG S+++ +++ Sbjct: 99 IAPSEVDASPGDVTLNFDGTDIREVVKVILGDLLKVNYVLHPAVQGATSLQTGRPLRRED 158 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 ++L + +++ + + V + V+ + + + ++VPL Sbjct: 159 LLPTLETLLRMNNAALVQKGDRYEVVPLANAVQGRVTPQLGETDRALPNGYSVQVVPLRY 218 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 + A ++ +L + GSV + N+L++ G + ++ L++ I+ DV + Sbjct: 219 IGAEEMNSILTPLAPEGSV--IRVDNLRNLLVIAGTSPEMSNLLDTIRVFDVDWMSGLSV 276 Query: 195 --IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP-EKARQRI 251 LEYA ++D+ L L+++ G P + + + N+L++ P E+ Q++ Sbjct: 277 GFFVLEYAKSKDVVTQLESLLADESG---NPLKGIFRFIPVESANALLVVSPQERYLQQV 333 Query: 252 TSLLKSLDVEESEEGNTR---VYYLKYAKATNLVEVLTGVSEK----------------- 291 + ++ LD+ E+ ++ VY +K++ A +L ++L+ + Sbjct: 334 RNWIERLDMAEARSDSSERLYVYRVKHSDAESLADILSQLFGGTGSNARKSSVGNVAPGL 393 Query: 292 --------------------LKDEKGNARKPSSSG---AMDNVAITADEQTNSLVITADQ 328 + R+ +SS +V I AD NSL++ A Sbjct: 394 GRSSSIGGTTTTTTSGNSDSKTSQSQTTRQSASSHELEMSSSVNIVADAVNNSLLVRASP 453 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFN 388 +K+ + +LDI QVLVEA IVE+ L GVQW GA + F Sbjct: 454 RDYKKILDALKQLDILPLQVLVEATIVEITLSGSLKYGVQWELFGPGADGKS------FA 507 Query: 389 AAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSI 448 + G D + GI + P ++ N L+ALA +N ++L++PS+ Sbjct: 508 SLDGTFDDAETSGIGTMFPGFNWAMVSN-------PDTIKATLSALAGDNLLNVLSSPSV 560 Query: 449 VTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT--VERKTVGTKLKVTPQVNEGDAVLLE 506 + +DN+ A VG++VP+ + Q + + K G L V P+V G V LE Sbjct: 561 MVMDNQTAKIQVGREVPIATSKQDGTSTTDRTYTTISYKDTGVILTVKPRVTPGGLVQLE 620 Query: 507 IEQEVSSVDSSSNSTLG-PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGD 565 IEQEVS+V + S L P+F RTI ++V V++ + VVLGGL++D + +P L Sbjct: 621 IEQEVSTVFEENASGLNSPSFKKRTITSSVAVRSNQAVVLGGLIEDTRSDGKQGIPGLYS 680 Query: 566 IPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 +P+VG LF TS + L+V + P +I +D S++++ + R + Sbjct: 681 LPVVGGLFGETSKSSTRTELVVVLTPKVIANDQDIESVTEDFRQKVRGLK 730 >UniRef50_C8PXJ4 General secretion pathway protein D n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PXJ4_9GAMM Length = 813 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 191/661 (28%), Positives = 306/661 (46%), Gaps = 70/661 (10%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 A HA Y + +ADI+ F++ + K ++DP + G ++V SN S+QE Y F Sbjct: 29 AAHAATG-YKVHLQDADIKAFIDQIATITQKNFVLDPRINGNVTVISNKPLSRQEVYDLF 87 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 L+++ + G I D G + V G+ D G ++ TRI L N A D Sbjct: 88 LAVMKVNGIVAI--DRGLTTELVPDTVAKQAGVDVDLRGNTAGSQMATRIYYLTNTNAND 145 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY 199 + ++R MM N N +IL+ RA ++N+ ++I +D +K II L + Sbjct: 146 ILNVIRPMMPP--YANAAVVPNVNAIILSDRADSLNQYAKLISDLDSNMNDKLTIIPLRH 203 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLS------------AKIVADKRTNSLIISGPEKA 247 A+ + ++L+ L G + S I+AD ++ L++ G + Sbjct: 204 VDAKRMMDLLSSLTGTGSGTAPAATGQSGQAAVASTGGSLINIIADPISDRLLVKGSAEM 263 Query: 248 RQRITSLLKSLDV-EESEEGNTRVYYLKYAKATNLVEVLTGV--------SEKLKDEKGN 298 ++ +++ LD RV+ LKYA AT++ E+L G+ S + + Sbjct: 264 TAKVQRMVEQLDTVPTQRLSGLRVFRLKYASATHIAEMLRGLLAYQSINSSGDQTTLQAS 323 Query: 299 ARKPSSSGAMDN-------------------------------------VAITADEQTNS 321 + S+S +N +I AD+ NS Sbjct: 324 SMFQSASNTSNNSALTTSNTAASPTGSPLNTSSTSNTTTTQNNGYQGRPFSIIADQTQNS 383 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 +++ A+ + ++ I LD RR QVL++A I+E+ + LGVQWA N + Sbjct: 384 VIVNANPELMVEIENAINELDTRRDQVLIQAAIMEISGNDTQQLGVQWAMGNANSGVGVI 443 Query: 382 TGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD---WGVLLTALASNN 438 I +A G+A + +A + G + NG+ +G +L A+ N Sbjct: 444 NFNNIGASAVGLASEILSKTPGTAAASVAGALLGIGTSKTDSNGNREFYGAILQAINKTN 503 Query: 439 KNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT---SGDNVFNTVERKTVGTKLKVTP 495 ++L+ PSI+TLDN+ A+ VGQ+VP ++GS TT S F TV R+ VG L V P Sbjct: 504 NANLLSMPSILTLDNEKANILVGQNVPFVTGSYTTASNSSTTPFQTVSRQDVGINLNVIP 563 Query: 496 QVNEGDAVLLEIEQEVSS-VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSK 554 + + +V LEI QEVSS VD + N+ G N I+ +L +TV LGGL+ D S Sbjct: 564 HIGDNGSVRLEISQEVSSIVDGTLNNVSGVVTNKNLIKTTILADDQQTVALGGLMRDNST 623 Query: 555 EQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQE 614 KVP LGD P++G LFR S K NL+VF++PTI+R+ S++++ R Sbjct: 624 YGQQKVPGLGDAPILGNLFRSKSKNSDKTNLIVFLQPTILRNGSAVASVTEKSLDGIRTM 683 Query: 615 Q 615 Q Sbjct: 684 Q 684 >UniRef50_B7RHZ1 General secretion pathway protein D n=1 Tax=Roseobacter sp. GAI101 RepID=B7RHZ1_9RHOB Length = 644 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 185/654 (28%), Positives = 324/654 (49%), Gaps = 45/654 (6%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 L + + AL+ P A+ E + N ADI E V + G+T+++DP++ G ++ Sbjct: 8 LLALVFLAVTALVRPHVAQAQ-ETFVINLRGADISLLAEQVSEITGRTLVLDPNLTGDVT 66 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 V S + + + F SIL + G++ + ++V + +T G PG D Sbjct: 67 VVSQQSLDSEGVWALFQSILRVRGFAAVETG-AVWQIVPELDARTK-GSPQKIDTPGSQD 124 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 +VTR++ L +P+ + +LR ++D G + E N +++T + +++++ + Sbjct: 125 -VVTRLLRLNRLPSAEAVRVLRPLIDEA--GYIEAIEDPNAIVVTDTLANVDRIVAIATT 181 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 D + ++I YA A +A +++++ PA A++ D +N L++ G Sbjct: 182 FDGEAEMEAEVIRFTYAEAGTVATAISEVLG--------PAGTGARLSVDVSSNVLLVRG 233 Query: 244 PEKARQRITSLLKSLDV----EESEEGNTRVYYLKYAKATNLVEVLTG-----------V 288 ++ +I SL +++D +SE +T +Y L++ +AT + +++ V Sbjct: 234 TQRDISQIRSLARAMDTSPRVAQSETVSTSIYRLQFGEATIVADLVRNTLTGSTDLTNPV 293 Query: 289 SEKLKDEKGNARKPSSSGAMDN-----VAITADEQTNSLVITADQSVQEKLATVIARLDI 343 + L ++ N S D V++ A +TNS+++ Q +++ +I LD+ Sbjct: 294 AASLGEDPANPDAQSFGSGPDAAPISPVSVQASIETNSVIVRGTQRQLAEVSQLIKALDV 353 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT 403 RR QV++EA IVEV LGVQ +G + T TG + +N + Sbjct: 354 RRPQVMIEAAIVEVSGDVAERLGVQ-----LGIGENTETGSIAATSFGNGGGSLQNVLVA 408 Query: 404 SANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 S G++ G + +G L+ AL ++ ++L+TPS+ T+DN+ A+ VGQ+ Sbjct: 409 LGQSNAAALST--GLSVGLASDSFGALIQALNTSTSANLLSTPSVTTMDNQSATIVVGQN 466 Query: 464 VPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSSNSTL 522 VP +G TT G NV +ER+ VG + V P++ G V LEIEQEVSS+ + + Sbjct: 467 VPFRTGRLTTDGGNVAEVIEREDVGITMVVKPRITAGGVVQLEIEQEVSSLTNQAVTGAA 526 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 N R I VL + G TVVLGGL+ D + KVPLLGD+P++G LF+ + R+K Sbjct: 527 DLVTNRRVINTTVLAENGGTVVLGGLITDDRLQNNQKVPLLGDVPVLGNLFKSRNNSRSK 586 Query: 583 RNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLD 636 R L VF+RPTI+ ++ TRYR+ Q + ++L+ E + L Sbjct: 587 RTLFVFLRPTIMLTRADLEKAAE---TRYRRAQNAEATVQPRSLLKHEKVTKLP 637 >UniRef50_Q4UYQ6 Type II secretion system protein D n=6 Tax=Proteobacteria RepID=Q4UYQ6_XANC8 Length = 690 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 184/639 (28%), Positives = 300/639 (46%), Gaps = 52/639 (8%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQ 73 +L M A+ + D+R F++ V + G T ++D VQG+++V S+ Sbjct: 20 SLTMLPLHAADAPAVRM--QDVDLRAFIQDVSRATGITFIVDTRVQGSVNVARAQAMSEA 77 Query: 74 EYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLE 133 + L++L G ++ +++ PG A + T++ L+ Sbjct: 78 DLLGMLLAVLRANGLIAVSSGPSTYRIIPDDTAAQQPGSAASGNL-----GFATQVFTLQ 132 Query: 134 NVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ 193 V AR A +L+ ++ G G ++ N L++ A + ++ ++ ++D Sbjct: 133 RVDARSAAEILKPLVGRG--GVIMAMPQGNSLLIADYADNLRRIRGLVAQIDTDRA-AID 189 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 + L +SA++LA L L ++ +S + ++ + +NSLI+ G QR+ Sbjct: 190 TVTLRNSSAQELARTLTTLFGQAGERSAV-----LSVLPVESSNSLIVRGDPALVQRVVR 244 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT---GVSEKLKDEKGNARKPSS------ 304 LD G+ V L++A A L+ VL G + + E G +P++ Sbjct: 245 TALDLDGRAERRGDVSVVRLQHASAEQLLPVLQQLVGQTPGNEAEPGQETRPTAVDVAAS 304 Query: 305 ----------SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 A I +N+L+I AD Q L VI +LD+ R QVLVEAI+ Sbjct: 305 AGAAQAQVIAPAAGKRPVIVRYPGSNALIINADPETQRALMDVIRQLDVHREQVLVEAIV 364 Query: 355 VEVQDGNGLNLGVQWANKNVGAQ------QFTNTGLPIFNAAQGVADYKKNGG------- 401 VE+ D LGVQ Q++ I A A + N G Sbjct: 365 VEISDTAAKRLGVQLLLAGRNGTVPLLATQYSGAAPGIVPLAAAAAGTRSNNGEDDSVLE 424 Query: 402 ---ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASF 458 +A + G+A + +G+++ A+ S+ +++L+TPSI+TLDN+ A Sbjct: 425 QARNVAAQSLLGLSGGLIGLAGQSNDAVFGMIIDAVKSDTGSNLLSTPSIMTLDNEQARI 484 Query: 459 NVGQDVPVLSGSQTTS-GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DS 516 VGQ+VP+ +G + DN F T++R+ VG +L+V PQ+N + L I+QEVS++ Sbjct: 485 LVGQEVPITTGEVLGAANDNPFRTIQRQDVGVELEVRPQINTAGGITLAIKQEVSAIAGP 544 Query: 517 SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYT 576 S + FN R I+ V+V+ G V LGGLLD ++ V KVPLLGD+P +G LFR+ Sbjct: 545 VSTQSSELVFNKRQIETRVVVENGAIVALGGLLDQNDRQTVEKVPLLGDVPGLGALFRHK 604 Query: 577 STERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 S R K NLMVFIRPTIIRD + ++ +Y R Q Sbjct: 605 SRNRDKTNLMVFIRPTIIRDAADAQRMTAPRYNYLRDRQ 643 >UniRef50_A3VSK1 General secretion pathway protein D n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSK1_9PROT Length = 736 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 190/683 (27%), Positives = 318/683 (46%), Gaps = 66/683 (9%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN--DTFSQQEYYQFFL 80 A+ Y N+ AD+ Q + V G+ +IDP V G +++ S S E + FL Sbjct: 34 AQQGAYQLNYEGADLAQVAQDVAFQTGRVFVIDPRVSGRVNIVSPPGSALSSDEVWAVFL 93 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDL 140 + L + G++ + + K++ + ++ VTR+VPL+ VPA Sbjct: 94 ATLQVNGFAAVPIGEREYKIIPANQASRDGAAAGSAAVGTT----VTRVVPLQFVPAGTA 149 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYA 200 A LR + S+ V SN LI+ + +++L+ V+ R+DV + + I L+ A Sbjct: 150 AANLRALAGENSL--VTPIVESNSLIIVDTPNNVSRLLSVVDRIDVDKSV-VRSIPLDNA 206 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV 260 +A ++A L+++++ G+ + S IVA +NS+++ G + R+ +++ LD Sbjct: 207 AASEVAATLSEIVNRPGGQGSRQS--SVSIVAVDASNSVVLRGEPEEISRLVPIIRELDS 264 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGV----------SEKLKDEKGNARKPSSSGAMDN 310 + YL +A +V ++ + E + + + Sbjct: 265 PSRSQVALDTIYLNHANGAQIVPLIQALLNEPITVAVSGEDDEGRVTTTQSGRQNSGPRA 324 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 +I TNSLVI A Q + +++RLDIRR QVL+EA+IVE+ D LGVQ+ Sbjct: 325 SSIAFHAPTNSLVIKAPPETQRLIRGIVSRLDIRRPQVLIEAVIVEIADTTARELGVQYV 384 Query: 371 NKNVG----AQQFTNTGLPIFNAAQGV-----ADYKKNGGITSANPAWDMFSAYNGMAAG 421 + G A F++T + +AA D N + A + G + Sbjct: 385 SGGAGLPLSAASFSSTRPNVVSAAGAALFLNEQDDNDNVTTITTTSANGDVTVTEGQSYD 444 Query: 422 FFNGDW----------------------------------GVLLTALASNNKNDILATPS 447 + D GVLL+AL S++++++L PS Sbjct: 445 ANDPDLAIAGQLVEAAVQELLNFNGFLFGAGGETGDGGVYGVLLSALQSDSQSNVLQVPS 504 Query: 448 IVTLDNKLASFNVGQDVPVLSGSQTTSG-DNVFNTVERKTVGTKLKVTPQVNEGDAVLLE 506 IV LDN+ + VGQ+VPV++G S F +ERK +G L+V PQ+ G+ V L+ Sbjct: 505 IVLLDNEEGTIQVGQEVPVVTGEAVGSDFQGGFRQIERKNIGNILQVKPQITAGNTVQLK 564 Query: 507 IEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 + EVSS+ + + GP N + V + G+T+VLGGL+D ++ SKVP+LGDI Sbjct: 565 LNLEVSSLGAFAPDAQGPITNESILDLTVSAEDGQTLVLGGLVDKDRRQTESKVPVLGDI 624 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 PL+G LF+ + + LM+FIRPTI+RD S++ KY RQ+Q +R+ + L Sbjct: 625 PLLGNLFKGQAQSDQESTLMIFIRPTILRDAQAADSVTARKYDYVRQQQMRRLREGQRPL 684 Query: 627 VGS-EDLPVLDENTFNSHAPAPS 648 + + + + PAP Sbjct: 685 LDTVVQDYIGPGADYVPSQPAPD 707 >UniRef50_O67320 General secretion pathway protein D n=1 Tax=Aquifex aeolicus RepID=O67320_AQUAE Length = 625 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 159/608 (26%), Positives = 277/608 (45%), Gaps = 39/608 (6%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 F+ DI+ V + LGK ++IDP V+G I++ SN S+ E + F L Sbjct: 17 GVVLKFDEVDIKTVAVQVAKLLGKNLVIDPRVKGKITIISNGEISESEALELFSQALASQ 76 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 G+S+I L+ +K+V ++ G + G G E VT + L+N A + LR Sbjct: 77 GFSLI-LEKDTMKIVPASQ-----GYPFTEIKAGKGGEFVTLVYKLKNTNASQVVSALRP 130 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLA 206 + G + + SN +I+T A ++NK+ +++ +D G + ++ L+Y + Sbjct: 131 FLSP--YGRIAFHAQSNSVIITDYADSVNKVKKILFYLDS-GGGEVRVYKLKYVKPSYVV 187 Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES--E 264 ++LN + S + P + I N++ + ++ + I ++ LD S Sbjct: 188 KLLNPFSTLSTKRYGEPVV----IAGVDEMNAVAVYANKEIHRIIEKVISDLDDPSSLEA 243 Query: 265 EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK---------GNARKPSSSGAMDNVAITA 315 E + + L + A + E L V + +K + +S + I Sbjct: 244 ERSFYIIPLNFVSAEEIYESLNSVFKGIKSVSVGTKKAKKGKGVQALTSITLKSGMKIGF 303 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV- 374 D++TNSL++ A +S E + I ++D RR Q+L+ A I+E + L G++W Sbjct: 304 DKRTNSLILYATKSEYEAVREFIKKIDKRRKQLLLTATIIEASAKSILEAGIRWQILGTH 363 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTAL 434 G F + L A ++ G S + FF D L + L Sbjct: 364 GGAAFKGSSLQDVYNAIKSGNFVIGGFSKSGT-------TVSIGGIDFFFPDLVFLFSLL 416 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVT 494 ++++ P I+TLDN+ A VGQ VP +G + N T + K VG +LK+T Sbjct: 417 EQGTGFNVVSNPKILTLDNQEALIKVGQVVPFPTGIKYDVNGNPIITYDYKDVGLELKIT 476 Query: 495 PQVNEGDAVLLEIEQEVSSVDS------SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGL 548 P++ G+ V L IE ++ + S + P + R + + V+V+ G TVV+GGL Sbjct: 477 PRIT-GETVRLVIELKLQEITGYLTNEVSGVNYTVPITSNRELNSDVVVENGRTVVIGGL 535 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKY 608 + S + K+P LGDIP++G+LFRY E+ K +L +F+ P +I L++E Sbjct: 536 ISRKSLKSTEKIPGLGDIPVMGRLFRYDRDEKDKTSLFIFLTPYVITSPQELAKLTQEHE 595 Query: 609 TRYRQEQQ 616 R+ + Sbjct: 596 KLARELMK 603 >UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseudomonas RepID=B1J7E4_PSEPW Length = 745 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 146/666 (21%), Positives = 271/666 (40%), Gaps = 86/666 (12%) Query: 18 PCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 P A E NF + I + ++G L + I V+G++S ++ ++Q+ Sbjct: 95 PPAAKDEQGDIVFNFTDQPIEAVINSVMGDLLHENYSISQGVKGSVSFSTSKPVTKQQAL 154 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 ++L ++I + V+ A+ + ++ L R+ PL + Sbjct: 155 SILETLLSWTDNAMIRQGERY--VILPADKAVAGKLVPQVPVAQPATGLAARLYPLRYIG 212 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--I 194 A ++ LL+ + + ++ NV+ L G + + I DV + + Sbjct: 213 ASEMQKLLKPFVRENAF--LLVDPARNVISLAGTPDELANYQDTIDTFDVDWLKGMSIGV 270 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITS 253 L+ AS +L L +L G MP + + ++RTNS++ IS + Q + Sbjct: 271 YGLQRASVAELMPQLQKLFGPDSG---MPLSDMVRFMPNERTNSIVAISAQPEYLQEVGD 327 Query: 254 LLKSLDVEESEEGNTRVYYLKYAK---------------------ATNLVEVLTGVSEKL 292 ++++D E VY ++ K A ++ L S Sbjct: 328 WIRTIDEGGGNEPQLFVYDVRNMKAADLARYLRQIYGSGQINDDKAASVAPGLKTTSLTS 387 Query: 293 KDEKGNARKPSSSGA--------------------------------------MDNVAIT 314 + G+ SG ++V IT Sbjct: 388 LNGTGSQSGQGLSGMGMNTQASIREAPSEDDYEDTGQPEASSAESADGSVKSLEESVRIT 447 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 A + +N L++ + +++ + I RLD QV +E I+EV+ L+LGVQW + Sbjct: 448 AQKSSNQLLVRTRPAQWKEIESAIKRLDSPPLQVQIETRILEVKLTGDLDLGVQWYLGRL 507 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTAL 434 + T G A A + M F + + V L AL Sbjct: 508 AGNSSSTT-------------VANESGSQGALGAGGVALGSASMFYSFVSSNLQVALRAL 554 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPV-LSGSQTTSGDNVFNTVERKTVGTKLKV 493 + +L+ PS+V L+N+ A VG ++P+ + T+ D ++VE G L V Sbjct: 555 ETRGLTQVLSAPSLVVLNNQQAQIQVGDNIPISQTTVNTSDSDTTLSSVEYVQTGVILDV 614 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT--FNTRTIQNAVLVKTGETVVLGGLLDD 551 P++N G V ++I+Q+VS D S+ +T P ++R + V V++G+TV+LGGL+ Sbjct: 615 VPRINPGGLVYMDIQQQVSDADDSAVTTTQPNPRISSRAVSTQVAVQSGQTVLLGGLIKQ 674 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 + + ++VP L IP +G LF TS R + L+V I P ++ + + R ++ + + Sbjct: 675 DNGQSDTRVPGLSSIPGLGWLFGSTSKSRDRTELIVLITPRVVNNPEQARQVTADYRQQM 734 Query: 612 RQEQQQ 617 + ++Q Sbjct: 735 QVLREQ 740 >UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMF5_AGRRK Length = 714 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 150/630 (23%), Positives = 280/630 (44%), Gaps = 73/630 (11%) Query: 25 NEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E Y N +A I + I+G L + ++DP V G ++++++ S+ S L Sbjct: 90 GEGYTLNLVDAPISAAAKSILGDILKVSYVVDPRVNGKVTLQTSQPVSRDALVDILESAL 149 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 + G +++ + + V + T+P + S+ P G + +++ L + A ++ + Sbjct: 150 AVNGAAIVRKGDSYQIVPIGNSFSTTPAVTVPSATPS-GPGVRVQVIELRFIGAEEMKSI 208 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII--HLEYAS 201 L + GS+ + N+L+L G + ++ + + I DV + + L+ + Sbjct: 209 LEPISRPGSI--LRADTARNLLMLAGSNADLSAMRDAIATFDVDWMKGMSVALHPLKASQ 266 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA-RQRITSLLKSLDV 260 D+A+ LN + G P K V + R N++++ +A + + LD Sbjct: 267 PADVAKELNTIFGTQDG----PNAKLIKFVPNDRLNAVLVITSRRAYLSQAADWINKLDR 322 Query: 261 -EESEEGNTRVYYLKYAKATNLVEVLTGV---SEKLKDEKGNARKPSSS----------- 305 + E VY ++ A L +VL V EK NA P + Sbjct: 323 IASTNEKQLFVYNIQNRPAKELAQVLQSVIAGQEKSAPSSSNAVAPDMAPTTLTGDATTT 382 Query: 306 --------------------GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRR 345 G + ++ AD + N+L+I+ Q E + ++ +LD+ Sbjct: 383 EPAAANTNMASATASASTTAGDSTHTSVVADVENNALLISTTQREYEHIEQILKQLDVMP 442 Query: 346 AQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSA 405 QVL+EA+I EV + L G++W +N K G S Sbjct: 443 TQVLIEAVIAEVTLNDQLKFGLRWFFEN-----------------------GKFGVGLSD 479 Query: 406 NPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP 465 +++ G A F + + G L AL+S +I++ P+++ L+N+ A+ VG VP Sbjct: 480 LSDGSTGASFPGFAWTFASSNVGATLNALSSITNVNIVSAPTLMALNNQKATLQVGDQVP 539 Query: 466 VLSG---SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSSNST 521 +++ S T+S + ++++ K G L V P+VN V+L+I+QEVS+V ++++ Sbjct: 540 IVTQQSASTTSSNTAIVSSIDLKDTGVILTVLPRVNSSGRVMLDIQQEVSNVVKTTTSGI 599 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 PT R + V+V E+V LGGL+ + S+VP+LG +P+ G F+ Sbjct: 600 DSPTIQQRKLSTKVIVDDNESVALGGLIQQSNTLNHSQVPILGKMPIFGNAFKNKEDTIN 659 Query: 582 KRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 K L++FI+P I+RD R +++E + Sbjct: 660 KTELIIFIKPRIVRDVRQARDVTEEFRNQL 689 >UniRef50_A9GDS2 General secretion pahtway protein D n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GDS2_SORC5 Length = 864 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 179/648 (27%), Positives = 293/648 (45%), Gaps = 60/648 (9%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSV-QGTISVRSNDTFSQQEYYQFFLSILDL 85 + N + AD+ + V+ + G+ + + Q +V + + + E Y FL+IL Sbjct: 108 KVSFNLDEADLPELVKAISNITGRRFIYGGKLRQIKATVYAPEKVTVAEAYSAFLAILAS 167 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP-GVGDELVTRIVPLENVPARDLAPLL 144 +VI FLK+V + + + ++ P D VTR+ L ++ A + +L Sbjct: 168 NDLTVIPHGR-FLKIVETPGAVSETTPVFGTAAPVPAEDRFVTRMYRLSHIDANEAGGVL 226 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII-HLEYASAE 203 + G+V Y P N+LI+T + I +++ +++ +DV G Q + + Y SA Sbjct: 227 SKFKSKD--GDVTVYPPGNLLIITDTGTNIQRMLRIVEEIDVGGAGDQLWVQPVHYGSAA 284 Query: 204 DLAEILNQLISESHGKSQMPALLSAK----------IVADKRTNSLIISGPEKARQRITS 253 ++A LN+++ S G + I+AD RTNSLII+ E R+ Sbjct: 285 EVATKLNEIVDPSRGAAGGGRPGRGGAGGAGGTGARIIADDRTNSLIITATEPDYLRVLG 344 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKD-------EKGNARKPSSSG 306 +LK LDV ++ EG V L++A L L V G P+ G Sbjct: 345 ILKRLDVAQTGEGQVHVLSLQHAGCKELSATLNQVLSGGSGGGAPVGGRPGARAAPAVPG 404 Query: 307 AMDN-----VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 + D+ V +T DE +N L+IT+ +L VI LD R QV +EA+I++V Sbjct: 405 STDDIFEGQVKVTCDEASNKLLITSSPHDYAQLRAVIDELDEPRRQVFIEAVIMDVNVSR 464 Query: 362 GLNLGVQW--ANKNVGAQQFTNTGLPIFNAAQGVADYKK-NGGITSANPAWDMFSAYNGM 418 L+ G+ + G + N Q V G + + + N + Sbjct: 465 SLDFGIGYHAGAPFNGLNPDDSVVYGGNNIRQSVIGLPAQLGALALGIKGPAITGSNNIL 524 Query: 419 AAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-- 476 G +GV+L ALA + +++LATP I+ DN A ++GQ++P+ + + Sbjct: 525 GTGISIPAFGVVLHALAQDGDSNVLATPHILATDNVAAEISIGQNIPLQTNVGGGGLNQL 584 Query: 477 -------------------------NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 V T R+ VGTK+KV P VN+ D V LE+ +E+ Sbjct: 585 ASLAGGAGAAAGGLGGLAGLLGGLGGVGGTAARQDVGTKIKVVPHVNDSDQVRLELSEEI 644 Query: 512 SSVDSSSNSTLGPT-FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 S + LG N RT ++V+ +TVV+GGL+ D +K+P+LGDIP++G Sbjct: 645 SDAGAPLEGALGAIPINKRTASTTLVVRDQQTVVIGGLMRDGMTTSETKIPVLGDIPVLG 704 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQR 618 LFR + K NL++ + P +IRD D R++ + K RQE R Sbjct: 705 FLFRQRVKTKTKTNLLLVLTPYVIRDQDDLRTIFERKMQE-RQEFIDR 751 >UniRef50_A3SDT6 General secretion pathway protein D n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SDT6_9RHOB Length = 631 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 166/643 (25%), Positives = 296/643 (46%), Gaps = 42/643 (6%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY 75 ++P A+ E + N +ADI VE + + G+T+++DP + G ++V S + ++ Sbjct: 1 MLPAPVRAQ-ETFVINLRDADISLLVEQISEITGRTLVLDPGLVGEVTVVSAEALDKEGV 59 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 + F SIL + G+ + +V+ A +T+ G + VT ++ L + Sbjct: 60 WSLFQSILRVRGFVAVQAG-SIWQVIPEAEARTASGPNLGEEVIAGSQDFVTEMLRLNRL 118 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII 195 P+ + +LR ++ G + E N +++T + +++++ + + D + +++ Sbjct: 119 PSAEAVRVLRPLV--AESGYIEAVEDPNGVVITDTRANVDRIMAIARSFDGDALVRSEVL 176 Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLL 255 A A + + +++ ++ A++ D +N L++ G + I SL Sbjct: 177 RFRSADAVTVGSAILEVLGQAG--------TGARLSVDAGSNLLLVRGTPEDIAEIRSLA 228 Query: 256 KSLDVEESEEGN----TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG----- 306 ++DV ++ T V+ L+Y A + +++ G D + Sbjct: 229 IAMDVAPRKDPREAVATTVFNLQYGDAQIIADIIKGTVGDATDITNAVAADVGAQSAEAT 288 Query: 307 ------------AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 A D V ITA +TNS+V+ + +++ ++ LD+RR QV++EA I Sbjct: 289 SDGQFVPLNRVVAPDAVNITASVETNSIVVRGTAAQVQEVGQLVHALDVRRPQVMIEAAI 348 Query: 355 VEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 VEV LGVQ N + N + G + PA S Sbjct: 349 VEVSGEVAERLGVQLGL----GPNVPNGAIAASNFSNGGGVSLGSVLAAVGVPAGSALST 404 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 G+ G D+G+L+ AL+ + +L+TPS+ TLDN+ A+ VGQ+VP +GS T Sbjct: 405 --GLTLGAGGNDFGILVQALSQSTSARLLSTPSVTTLDNEPATIVVGQNVPFRTGSFATD 462 Query: 475 GDN--VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSSNSTLGPTFNTRTI 531 G+ F T+ER+ VG + V P++ G V L IEQE+SS+ +++ N R I Sbjct: 463 GNTATPFTTIERRDVGITMNVVPRITAGGVVQLVIEQEISSLTNANVEGAADLVTNRRVI 522 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 V+ TVVLGGL+ D SKVP LGD+P+VG+LF+ + +R L VF+RP Sbjct: 523 NTTVMADNRGTVVLGGLITDDRINGSSKVPGLGDLPVVGELFKSRNARNTQRTLFVFLRP 582 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPV 634 TI+R + S ++ R + + + LP+ Sbjct: 583 TILRSREDITEASSRRFNRLKAADATQQPRTILKKQEVQQLPL 625 >UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobium loti RepID=Q988A3_RHILO Length = 708 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 149/641 (23%), Positives = 277/641 (43%), Gaps = 69/641 (10%) Query: 25 NEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + ++ N NA I + V G L ++DP VQGT++++++ SQ S L Sbjct: 89 SGKFELNLVNAPIADAAKAVLGDALHLNYIVDPRVQGTVTLQTSQPVSQDALVDILQSAL 148 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 + + IT G ++V + + S ++ S G + +++ L+ + A ++ + Sbjct: 149 AVN-AAGITSRAGTYQIVPLSEIMASTPPVSVPSTSPSGPGVKVQVLQLQFIAADEMKTI 207 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII--HLEYAS 201 L + GSV V N++ + G S +N + E + DV + L+ + Sbjct: 208 LEPITRQGSVLRV--DSTRNIITVAGSDSDLNAIREAVSVFDVDWMRGMSVALHPLKTSK 265 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA-RQRITSLLKSLDV 260 E +A L+ + G P + + + R NS+++ A R + + LD Sbjct: 266 PEAVAAELDSIFGTKEG----PGAKLIQFIPNDRLNSVLVITSRPAYLARAATWINKLDR 321 Query: 261 -EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK------------------ 301 E+ E VY ++ A L VL+ V +G + Sbjct: 322 LAETNESQLFVYQIQNRPAKELASVLSSVLGTTVKTEGQSGGSNVAPDQTPIAMQSDGVT 381 Query: 302 ------PSSSGAMDN------VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 PS S + + AD + N+L+I +++ +++++D+ QV+ Sbjct: 382 PAPLTGPSPSLPQQDNQAPAHATVVADVENNALLIQTTARDYQRIEQILSKVDVLPTQVM 441 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW 409 +EA+I EV + L G++W +N G + + Sbjct: 442 LEAVIAEVTLNDDLKYGLRWFFENGGTKVS-----------------------VTDVAKA 478 Query: 410 DMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 + G + + V L AL+ ++++ P+I+ L+N+ A VG VP+L+ Sbjct: 479 AAAATLPGFNWSYATDNIQVTLNALSKITDVNVISAPTIMALNNQKAILQVGDQVPILTQ 538 Query: 470 SQTTSGDN---VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPT 525 +G+ + N+V+ K G L VTP++N V+L+I+QEVS+V + +S + PT Sbjct: 539 QSQDTGNGSAPIINSVQMKDTGVILTVTPRINNAGRVMLDIQQEVSNVTKTDSSDIDSPT 598 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 R +Q VLV GE++ LGGL+ + S+VP+LGDIP++G F+ + L Sbjct: 599 IQQRKVQTRVLVNDGESLALGGLIQQNNSVDRSQVPILGDIPILGNAFKQKDDTIRRTEL 658 Query: 586 MVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 ++FIRP ++RD + R ++ E + + + L Sbjct: 659 IIFIRPHVVRDINEAREVTDEFRGKISLQTPIQKRRGGTKL 699 >UniRef50_Q2G4Y4 Type II and III secretion system protein n=3 Tax=Sphingomonadaceae RepID=Q2G4Y4_NOVAD Length = 748 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 197/703 (28%), Positives = 315/703 (44%), Gaps = 93/703 (13%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 QY N ADIR FV + G+T ++D VQ ISV S+ S+ EY++ FLS L Sbjct: 29 QYTLNVREADIRAFVADAAEVTGRTFIVDSRVQAKISVVSDRPLSRSEYFEVFLSTLRAN 88 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 G + NG ++ + T+P I SR ++VT +V L + A LR Sbjct: 89 GLVAVPTGNGAFRIQPAEGAATNPTRI--GSRGAAQSQMVTEVVRLRTIDAAQAVETLRP 146 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLA 206 ++ G + + N L++ A + ++ ++ +D T Q +I LE+A A ++A Sbjct: 147 LVSK--EGAITANKAGNSLVIVDYADNLRRIRALLGDIDRDSTTTQTVI-LEHAGAREIA 203 Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEG 266 L QL+ A A +VA N++++ G R++++ + LD + + G Sbjct: 204 TALTQLVPAGA----EGARALATVVAVDSANAVLMRGDGSTLSRLSAMARQLDAKAALGG 259 Query: 267 NTRVYYLKYAKATNLVEVL-----------------------------------TGVSEK 291 +V +L YA + LV VL G + + Sbjct: 260 EIKVVWLDYADSAALVPVLERLIGGQGGGEVASASAAPISLGGVGSNATSTAGTQGSTGQ 319 Query: 292 LKDEKGNARKP--SSSGAMDNVAITADEQTNSLVITADQ-----------SVQEKLATVI 338 G++ P ++SG + N I + IT Q +L+ +I Sbjct: 320 AASTGGSSTSPIGATSGGLGNGPIKLANGRGTATITRYPGANAIIIAAPADEQRRLSELI 379 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ--WANKNV--GAQQFTNTGLPIFNAAQGVA 394 +LD+ + QVLVEAIIVE+ + LGVQ + KN+ ++N+ I + A G+ Sbjct: 380 RQLDLPQEQVLVEAIIVEISNDVAKELGVQMLFGGKNMPFAVTNYSNSSPNIIDIAGGLL 439 Query: 395 DYKKNGGITSANP------------------AWDMFSAYNGMAAGFF-----NGDWGVLL 431 N T N A + G GF + G ++ Sbjct: 440 ADNLNQTTTVVNGDTVTTTTNSTAGDLLRENAASKLLSARGAYTGFLTELSKDTYLGAII 499 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--NVFNTVERKTVGT 489 A+ ++ ++IL+TP I T +N AS GQ++PV +G + G+ + F T++R+ VG Sbjct: 500 NAVQTDKNSNILSTPHITTNNNVPASILFGQEIPVSTGEALSGGNFSDTFRTIQRQNVGI 559 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF-NTRTIQNAVLVKTGETVVLGGL 548 +L VTPQ+N + + L++ QEVSS+ + + T N R I+ V V E V LGGL Sbjct: 560 ELDVTPQINASNMIRLDLRQEVSSIAGTVSKTSNELIVNKREIKTTVTVGDREIVALGGL 619 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKY 608 LDD + + KVPLLGDIP++G+ F+ + R K NLMVFIRPTI+R+ ++L+ +Y Sbjct: 620 LDDNEQRTLQKVPLLGDIPILGEAFKSRARSRVKTNLMVFIRPTILRNAADRQALAARRY 679 Query: 609 TRYRQEQQQRIDGKSKALVG------SEDLPVLDENTFNSHAP 645 R Q + + + LPV AP Sbjct: 680 GVVRDAQVKFDSKREPTIDDLIVDYMGATLPVAPSAEVAVVAP 722 >UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P6R4_AZOSE Length = 769 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 167/694 (24%), Positives = 281/694 (40%), Gaps = 95/694 (13%) Query: 25 NEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 F A + F I+G L + + G +++ + + S+L Sbjct: 102 GGAVSLKFEQAPVTDFAHAILGDLLKLDYTLHQPLGGEVTIHTQGAVPPDKVLSILESVL 161 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G ++ G V R ++ + G +V +VPL+ V A ++A + Sbjct: 162 AANGLTLARDAQGLYHVGRPELLRGLGASAVNVKAIPTGQGMV--VVPLQFVGAAEMADI 219 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYAS 201 LR + A + V N+LIL+G + + ++ + DV + + LEYAS Sbjct: 220 LRPVAPAEAFVRVDTL--RNLLILSGSGNQLEGWLDFVNIFDVDMLKGMSVGLFPLEYAS 277 Query: 202 AEDLAEILNQLIS---------ESHGKSQMPALLS-----------AKIVADKRTNSLII 241 +++ L + G+ Q PA + +I+ +R N+L++ Sbjct: 278 VKEVDAALRAVTGAPAAAASAARGEGQQQAPAEIKQLPTFGPLGGVVRILPIERLNALLV 337 Query: 242 SGPEK-ARQRITSLLKSLDVEE--SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 P Q+ ++ LD E VY ++ A +L +L+ V + G Sbjct: 338 VTPRAHYLQQAKEWIEKLDRPSDGGTEPQLYVYPVQNGSAQHLGSLLSAVFGG--GQAGA 395 Query: 299 ARKPSSSGAMDN-----------------------------------------VAITADE 317 AR P+ SG V + ADE Sbjct: 396 ARTPTDSGVAPGLSSIGRTGLGGSGMMSQALNNAGRNDGSQTQATTQFSLGPLVRVVADE 455 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ 377 N+L+I A S K+ + RLD+ QVL+EA I+EV + G+QW + Sbjct: 456 FNNALLIYAPGSEYRKIEAALRRLDLSPTQVLIEASILEVTLSDETRFGLQWFFEGKLGG 515 Query: 378 QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASN 437 + +GL A++ + + N A G +L A+A Sbjct: 516 DYRGSGLFTDRASETLGRTVPGFSYSITNAA----------------GQVRAVLNAMAQK 559 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQV 497 + +++++PS++ LDN A +VG P+ S T G +++ K G L+VTP Sbjct: 560 SLVNVISSPSVMVLDNHTAVIHVGDQQPIRSTQTVTDGGTTSTSIQYKDTGVMLQVTPSA 619 Query: 498 NEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQV 557 N G V ++I+Q V+ V + ++T +FN R + + V V+TGETV+LGGL+ D Sbjct: 620 NAGGMVAMDIKQSVTDVGAVDDATGQRSFNQREVASKVAVRTGETVILGGLIRDSDTNGK 679 Query: 558 SKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ-- 615 + VP L DIP++G LF TS + L+V I P +++ D R L E R Sbjct: 680 TGVPWLHDIPVLGPLFGTTSDVTRRTELLVMITPRVVQSDQQVRELGIEMRRRMEGLSVL 739 Query: 616 QQRIDGKSKALVGSEDLPVLDENTFNSHAPAPSS 649 ++ VG + LP +E + APAP+S Sbjct: 740 PGWERFEADPGVGKDMLPAPEE----TPAPAPAS 769 >UniRef50_A8UQX4 General secretion pathway protein D n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UQX4_9AQUI Length = 663 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 150/627 (23%), Positives = 277/627 (44%), Gaps = 55/627 (8%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 + NF N DI + +G+ +GK +++DP+V+G +++ + S +E + Sbjct: 27 AEEAKRKGEVVLNFQNTDIGELALFMGELVGKNVVVDPAVRGKVTLVFSKPLSLKEAWDV 86 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 F S L + GY V+ +KV+ T +A R EL + L A+ Sbjct: 87 FTSALFMQGYGVVE-GKKTVKVLPVNEAVT----VAKFKRKPAEGELAVLVFNLRYADAQ 141 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE-KQQIIHL 197 + +R + V + PSN LI+ I+K ++ +D G E + ++ L Sbjct: 142 TVMNAVRPFLSP--FARVSMHSPSNSLIIADVGENIDKARRILSSLDRSGIEGEVRVYRL 199 Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS 257 + S +D +++ L S + +P ++S+ N+L++ P +A I ++ Sbjct: 200 RHLSVKDAVKLVTPLNSVFSKRFGIPLVVSSS----DEANALVVFAPAEAHGVIEEIISE 255 Query: 258 LDVEE--SEEGNTRVYYLKYAKATNLVEVLTGV-----------------------SEKL 292 +D E SE + + LK+ A + E L + Sbjct: 256 IDTREVVSEVRSFYIIPLKFISAEEIAESLQSLLGGGRGRVSRAVNRPVQRTQKKGGSPQ 315 Query: 293 KDEKGNARKPSSS-----GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 + +GN R + + I D TNS+++ A +S E + ++I+ LD+RR Q Sbjct: 316 RKPQGNVRTQVVKKIGFITTKEGMKIGFDRGTNSVILYATKSEYEGIRSLISGLDVRRKQ 375 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKN-VGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 VL+ A IVE + L++GV+W G F T L ++ ++ Sbjct: 376 VLIAATIVEASTKSLLDIGVRWQILGKRGGASFRGTSLSNIYSSFASGNFL-------MG 428 Query: 407 PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 D+ A FF D +L + L + + +I++ P ++TLDN+ A VGQ VP Sbjct: 429 VFSDVGRTVTVGDATFFFPDLVLLFSLLETGSGFNIISNPRVLTLDNQPAIIKVGQVVPY 488 Query: 467 LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGD---AVLLEIEQEVSSVDSSSNST-- 521 G + T + K VG +L VTP+++ + + L +E+ + V + +T Sbjct: 489 AEGVKFDINGQPIITYDYKEVGLELNVTPRISGDNLRLTIGLNLEEIIDFVTNEIGATSY 548 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 P + R + + V+++ G+TV+LGGL+ + + + VP L IP++G+LFR ++ Sbjct: 549 TVPVTSNREVNSDVVIENGQTVILGGLVSTKTLKTMEGVPGLWRIPILGRLFRRDVKQKD 608 Query: 582 KRNLMVFIRPTIIRDDDVYRSLSKEKY 608 K L +FI P ++ + +++E Sbjct: 609 KTTLFIFITPYVVSSPEELTKITEEHR 635 >UniRef50_C0QPL4 General secretion pathway protein D n=1 Tax=Persephonella marina EX-H1 RepID=C0QPL4_PERMH Length = 669 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 147/619 (23%), Positives = 261/619 (42%), Gaps = 40/619 (6%) Query: 12 LAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFS 71 L ++ E Q NF D++ + GK I++ ++G IS+ + S Sbjct: 28 LQRIIQQAKEFKETGQVYFNFEKIDLKLLTYFISGLTGKNIVLSADIKGQISLIFPEPVS 87 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP 131 + + + SIL Y ++ F +V+ S + + +++VT + Sbjct: 88 IDDAWNIYTSILKSRNYILVDKG-SFYEVIPSGFSRNVTPPVKPE--LEESEDMVTYVYK 144 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG-TE 190 +N +LR + G + Y P+N++I+T S I L +VI +D Sbjct: 145 FKNADVTQAVNVLRGLKSPK--GLIFSYNPANIIIITDSQSNIKNLKQVISLIDTPSEGM 202 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 + ++ L+Y+S+ ++A L L S+ K + K K N++++ P + Sbjct: 203 EIKVYKLKYSSSGEIAAALTSLFSDLAKKG-----VQLKAYNLKSQNAVVVKAPSYVFKE 257 Query: 251 ITSLLKSLDVEESEEGNTR--VYYLKYAKATNLVEVLTGVSE-------KLKDEKGNAR- 300 I ++ LD R YLK +KA ++ VL + E K +KG + Sbjct: 258 IQDIISILDQPTPHPTYRRFWTIYLKNSKAEDIANVLNKLLENIRLVSLKEGAKKGKTQI 317 Query: 301 -------KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 KP S+ D + AD+ +NS++I A+++ E + ++ LD ++ QVLV A+ Sbjct: 318 KNLKTYTKPVSTQKTDRPKVVADKASNSIIIYANKTEYEAIKELVQNLDKQKKQVLVTAL 377 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 I EV + +GV+W G+ + G+ S + Sbjct: 378 ITEVSEQALKEIGVRWQVFGSQGGAAFRGGISKEGFYNIIGSTNFVAGVLSTSGENVEIG 437 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 + +I+++P I+T+DN AS NV Q P + Sbjct: 438 GNVLFFPDLLFLFSLL-----ERGTGFNIVSSPKILTMDNIEASINVSQVTPFAQSVKFD 492 Query: 474 SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG------PTFN 527 N + K VG LKVTP ++ + +++EI QEV+ V +G P + Sbjct: 493 INGNPIINYDYKEVGLILKVTPHISGDN-IVMEIHQEVNEVIGYEKPQIGEISYVVPITS 551 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 R + + V G+T+VLGGL+ + + + VP IP++G LF+Y S + K NL V Sbjct: 552 KRELNTTITVTNGKTIVLGGLVSKKTIKTMEGVPFFSSIPIIGNLFKYRSEDLNKTNLFV 611 Query: 588 FIRPTIIRDDDVYRSLSKE 606 F+ P II + +++E Sbjct: 612 FLTPFIIEKPEDLARITEE 630 >UniRef50_C6BTY5 General secretion pathway protein D n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTY5_DESAD Length = 671 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 164/639 (25%), Positives = 282/639 (44%), Gaps = 38/639 (5%) Query: 7 ITCCLLAALLMPCAGHAENEQ---YGANFNNADIRQFVEIVGQHLGKTILIDPSV--QGT 61 L+ LM A A+ E AN + + +FV+ VG++ G+ I+ + + Sbjct: 13 FVVLFLSMFLMVSAAAAQPEGGDGVHANLESIALDEFVKFVGRYTGRNIVFNKESLPRTF 72 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 +S+ + + ++ E F +L G+ +T DN V+ + KT I + G Sbjct: 73 VSIYAGQSLTEPELMAVFQQVLSGSGFHAVTRDNVTY-VLPIRDAKTISPEIKAAPSKGN 131 Query: 122 GDELVTRIVPLEN-VPARDLAPLLRQMMDA-GSVGNVVHYEPSNVLILTGRASTINKLIE 179 G+E++T + L + + +L Q+ G+V +V + V+ L + + KL+ Sbjct: 132 GEEIITSVFQLAGKMDPAKVQAVLTQVKSRIGTVTSVPMADAVMVMDLQDNVNKMKKLLG 191 Query: 180 VIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISE--SHGKSQMPALLSAKIVADKRTN 237 ++KR ++ +I LE ++++ +A L + + GK+ P ++ + A N Sbjct: 192 ILKR--AGAQQEHTLIELEKSNSKTVATKLTSFYKKLFTSGKTGAPPVIESLDWA----N 245 Query: 238 SLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG 297 SL++SG I SL+ LD ++Y L +A EVL + Sbjct: 246 SLLVSGSSDQIDTIKSLIGKLDRTSESYSKMKIYRLHNIEAVVAGEVLKSLISGGGIPSE 305 Query: 298 NARKPSSSGAM------------------DNVAITADEQTNSLVITADQSVQEKLATVIA 339 K S +G V ++ADE TN+L++ A ++ + Sbjct: 306 GNSKNSVAGDSAAKSSSSRDTSSASSNDSGGVQVSADEATNTLIVMAPTDQLSQIDNFVE 365 Query: 340 RLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKN 399 +LD + QV +EA+++E + GV+W G + A Sbjct: 366 QLDQAQDQVYIEALVLETTLDHAKEFGVEWQGGIDLGGSVATLGYTKAKDSNLSAYASNP 425 Query: 400 GGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFN 459 + + + F G L+ S ++++ P I+TLDN A Sbjct: 426 SNVPGGYSMGVLGDTISYAGRSF--PTIGALVNFTKSATDFNLISAPQIMTLDNAEAEIF 483 Query: 460 VGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVN-EGDAVLLEIEQEVSSVDSSS 518 VGQ+ P +G +TSGD V +T E K VG KLK+TP++N E V L++ Q ++V +S Sbjct: 484 VGQNRPYKTGQSSTSGDAVVSTYEYKDVGIKLKITPRINREDGLVKLKVYQTYNTVSEAS 543 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 + L P N R VL+ G T+V+GGL+ + VP L D+PL+G LF+ TS Sbjct: 544 TTEL-PITNDRKTDTTVLLADGSTMVIGGLIRADHTRTEAGVPYLSDLPLLGWLFKTTSN 602 Query: 579 ERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 K LMVF+ II+ + +LSK K +YR ++ + Sbjct: 603 SGNKNTLMVFLSARIIQTTEGLEALSKAKMDKYRNQRNR 641 >UniRef50_C0QK68 GspD2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QK68_DESAH Length = 761 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 142/638 (22%), Positives = 270/638 (42%), Gaps = 83/638 (13%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 NF+NAD+ + V + + L L++ + G +++ + + E + F IL+ Sbjct: 140 PGGLVLNFDNADLYEVVRTMAEILKINYLVEKDISGAVTIHTAGQLKRDELFYVFYQILE 199 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV---GDELVTRIVPLENVPARDLA 141 + G + + D ++V P + S+ G G+ ++ +IVPL+ + A ++ Sbjct: 200 INGLTAVR-DGDLYRIVALNEASRMPIGLRTSTDDGEISHGERVIIQIVPLKFISAVEMT 258 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQIIHLEY 199 ++ + A G +V SN+++L + + I+K + ++K DV ++ + + Sbjct: 259 KIITPFISAD--GTIVSQADSNMMLLVDKGTNIDKALRLVKVFDVDIFKRVDHRLYTMAH 316 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLLKSL 258 A ++ + LNQ + K++ R N+++ IS + +I L+ L Sbjct: 317 ADPTEIMQTLNQFFTSYG----QSLGKDVKLIELGRLNAIMAISSKSEIFDKIDELISLL 372 Query: 259 DVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK---------------- 301 DV + E +Y ++ +A+ L ++L+ + K+ + Sbjct: 373 DVPVDGYEPRIFIYNVRNGEASELGDLLSTIFSGKKESPSEDKNIKSSSKKEPSQAMLPV 432 Query: 302 ----------------------PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIA 339 SS ++ I D N+L+I A + + + V+ Sbjct: 433 QIVSKKEINDPKTKARPTPNSISGSSSLNTSINIIPDAIRNALIIEATPADYQVVLDVLK 492 Query: 340 RLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKN 399 RLD+ QVL+E + EV + +LGV+W + K+ Sbjct: 493 RLDVLPRQVLIEVTLAEVTLNDSSSLGVEWT-------------------------FIKD 527 Query: 400 GGITSANPAWDMFSAYNGMAAGFFNGD-WGVLLTALASNNKNDILATPSIVTLDNKLASF 458 GG + + N + F N W LTALAS +IL++PS++ DNK A Sbjct: 528 GGSVADGLIQGTLGSTNVLQYNFGNTQKWAATLTALASKGDVNILSSPSVLASDNKEAKI 587 Query: 459 NVGQDVPVLSGSQ---TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD 515 ++ +VPV++ T D + ++ + G L VTP +NE V +EI QEVS Sbjct: 588 DISTEVPVVTTEYKYGTDGDDMLATNIQYRNTGVILTVTPHINERGLVSMEINQEVSEQA 647 Query: 516 SS--SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLF 573 + + P+F R++Q + V +T+ +GGL+ ++ + +PLL +P LF Sbjct: 648 DAVLAGGQEYPSFYKRSVQTTLTVNDNQTIAIGGLMRKKEEDSSAGIPLLNQLPFFKYLF 707 Query: 574 RYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 T+ K L++ I P ++ D D ++ E R Sbjct: 708 GKTAGGNEKNELIILITPRVVSDLDDIDQVTNEFRQRV 745 >UniRef50_B4UDG8 General secretion pathway protein D n=4 Tax=Anaeromyxobacter RepID=B4UDG8_ANASK Length = 904 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 179/676 (26%), Positives = 316/676 (46%), Gaps = 88/676 (13%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSV-QGTISVRSNDTFSQQEYYQFFLSIL 83 ++ FN A++ +E + + + V +G I++ S + +E Y FL+ L Sbjct: 118 QGRFMLTFNRAEVVDVLEQASRWTCRNFIYTEDVARGKITLLSKTPVTAEEAYAAFLAAL 177 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIA--DSSRPGVGDELVTRIVPLENVPARDLA 141 + +V + ++ R+A+ K P S ++++T+++ L+ A L Sbjct: 178 NANNITVYPTGR-YWRLGRAADSKKMPIPTYTDPESGTPASEQVITKVIRLQYADADQLR 236 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK-QQIIHLEYA 200 ++ + G + P + L++T I ++ ++I+ +D +G +I+ + YA Sbjct: 237 GVMGNFISPQ--GADIQSIPPSTLVITDTGLNIRRIEKMIEAIDKVGGGDLVRIVQVRYA 294 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSA----------------------KIVADKRTNS 238 SA+DLA+ +NQ+ G+S PA +S+ K++ D RTN Sbjct: 295 SAKDLADKVNQIFQAQGGRSPRPARISSGPARPGVPTTQPAGGSVEVSVYKVLPDDRTNK 354 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 LI+ EK+ Q+I L++ LDV S +G V +LK A A L L+ +++ Sbjct: 355 LIVIADEKSFQQIMELVQQLDVPTSADGGVHVLFLKNANAEELATTLSNLAQGQAKRTTT 414 Query: 299 ARKPSSSGAMD---------------------------NVAITADEQTNSLVITADQSVQ 331 P+ A V ITAD+ N+L++ A + Sbjct: 415 PGAPTQPAARPVGMPGAPPAAAAAPTPAGDVTAELFSGEVKITADKTQNALLVQASGADF 474 Query: 332 EKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQ 391 + ++ +LD R QV VEA+I+EV N + LGV A+ + + +TG+ ++ Sbjct: 475 SAVQRLVEKLDRPRRQVFVEAVIMEVNLKNSMELGVS-AHGAIPYKYKGDTGVIPLSSQT 533 Query: 392 GVADYKKNGGITSANPAWDMFSAYNGMAA---GFFN-GDWGVLLTALASNNKNDILATPS 447 G + + ++ GF N G+L+ AL SN+ ++L+TP Sbjct: 534 GRVNSLDMSSAIALGGFLTGYTGPISAELKDLGFGNIPSLGLLIQALQSNSDVNVLSTPH 593 Query: 448 IVTLDNKLASFNVGQDVPVLSGSQTT------SGDNVFNTV----------------ERK 485 ++ DN+ + VGQ+VP SG + SG + +TV +R+ Sbjct: 594 LLATDNEESEITVGQNVPFQSGYAPSGLSNLLSGSSATSTVGSALGTQGLSSLYAPIQRQ 653 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 V KLK+ PQ+NEG + L IE++ + + LGPT R+++ ++ + T+V+ Sbjct: 654 NVELKLKIKPQINEGGNIRLTIEEQTEEIAE-KDPQLGPTTAKRSVKTQIVARDQSTIVI 712 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL+ D + VSK+P LG +P++G LFR T+T + K NL++F+ P IIRD+ YR + Sbjct: 713 GGLIQDRAIRSVSKIPFLGSLPILGWLFRDTTTTKQKVNLLLFLTPYIIRDEADYRRI-- 770 Query: 606 EKYTRYRQEQQQRIDG 621 Y + R+EQQQ I+ Sbjct: 771 --YEKKREEQQQFIEQ 784 >UniRef50_C1TK46 General secretion pathway protein D n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TK46_9BACT Length = 659 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 162/602 (26%), Positives = 278/602 (46%), Gaps = 28/602 (4%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 L+ E+ NF + D+ +F+ + + L K I+I P+V+GTI+V S + S E Sbjct: 41 LIEAAKAMRESGSVQFNFTDLDVVKFIRFMSELLQKNIIIAPNVKGTITVMSPRSVSLAE 100 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 Y+ L+ L++ G S+ + + + KV++ + PG G+++V ++VPL+ Sbjct: 101 AYKIMLTTLEMNGLSLEDMGD-YYKVLKGGTT-LENRAVRSRIGPGYGEQVVNQVVPLDF 158 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI-GTEKQQ 193 V ++ AG V+ + N L+LTG A+ + +++ +++ +DV G + Sbjct: 159 VSPGFAQKAVQP--AAGKTVMVIPLDEGNGLLLTGPAADVQRVVNLLRALDVPDGIRRIS 216 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 + ++ A+ + LA+ L L + G + LS D + +L++ G A + Sbjct: 217 AVPVKEANPDLLAQHLANLAKDPTGPFRGLTALS-----DSSSRTLLLVGDSSALESAKK 271 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAI 313 ++K LDV G VY LK A A + + L+ + AR + Sbjct: 272 IVKRLDVPPV-SGEFHVYRLKNADAQEVAKQLSQILGVA------ARLQPGKEGAMPTTV 324 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA--N 371 D TNSL+ + L +I +LDI+ QV+V +I EV N N G+ WA Sbjct: 325 VPDIPTNSLIFAVQEQQYAGLIDIIKQLDIQPKQVMVRGLIAEVNLTNLKNAGIDWATWG 384 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG------MAAGFFNG 425 V + + + + S ++ + G N Sbjct: 385 GQVSGSTVFAANAALGGSTGVPSTFVDWFQDLSKKETYEWITPETGEPYREKTTVYEGNS 444 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--NVFNTVE 483 + L + +IL+ P ++ DNK +S VGQ +P + S + + +V N+ + Sbjct: 445 LIYAYVQLLKKYDAMNILSMPRLMCTDNKESSLMVGQTIPQMKASTSDISNPSSVQNSYD 504 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETV 543 K G KLK+TP + G+ V L+IEQ V S+ ST P R ++ +V V+ GET+ Sbjct: 505 YKDTGLKLKITPHIRSGNLVALDIEQSTEEVLSAMTSTT-PVTAKREVKTSVQVRNGETI 563 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 +LGGLL + K +VP+L IPLVG+LF+ ++ +R K LMVF+ P I+ + Sbjct: 564 ILGGLLKETEKSLKQRVPILSYIPLVGELFKSSTNQREKIELMVFLTPYILETPEAATEA 623 Query: 604 SK 605 SK Sbjct: 624 SK 625 >UniRef50_A6Q682 Type II secretion system protein D n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q682_SULNB Length = 678 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 164/674 (24%), Positives = 307/674 (45%), Gaps = 48/674 (7%) Query: 6 KITCCLLAALLMPCAG--HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 K+T LL LL+ A++E NF + ++ F+E+V + K ILID ++G I+ Sbjct: 2 KLTKILLGILLIFTIALQAADDETVNVNFRDLSVKDFIEMVSKITQKNILIDTDLKGKIN 61 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 S + SIL G ++I F KVV+ T+ G D S G+ Sbjct: 62 FVSTKPIKKSSLIPLANSILRSKGLALIDQGE-FYKVVKG---STAAGEGLDVSSSINGE 117 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 + T + PL+N A + ++ +++ ++ ++ +NVL +T T+ + ++IK Sbjct: 118 TMKTVMFPLKNSNAAVVRAKIKPLLNRND--KIISFKENNVLAITATPRTLQSISKIIKA 175 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 V+ G ++ ++ L+ AS +++ + + + ++ I D+ TNSLI+ G Sbjct: 176 VEKRGVKRSVVVKLKNASVKEVFPNVQNMAKKLFPQTIESE--KVDIFKDEATNSLILVG 233 Query: 244 PEKARQRITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 E +R+ +K LD + + + V LK + + ++++ + ++ + R Sbjct: 234 KEDNDRRMIKYIKQLDQKGDDQTQKMYVLRLKNSNVEEMEKIMSKLISQMNNM-ATKRPK 292 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 + +D + N+L++ A + + ++DI + QV V+A IVE+ Sbjct: 293 KGGKPPSKAMVVSDIERNALIVLATGEQMRNIRETVRKIDIPKVQVYVKAKIVEIDKNMA 352 Query: 363 LNLGVQWANKNVGAQQFTNTGLPIFNAAQGVAD----------YKKNGGITSANPAWDMF 412 +G+++ + T++GL G + N T +P Sbjct: 353 EQVGMKYG---MNGGTITSSGLFTLAGNMGASALQMSPALLGFLNTNNTKTYTDPVTGSV 409 Query: 413 SAYNGMAAGFFNGD----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS 468 N A F + D G L L N +L+ PS++ +NK A VGQ +L+ Sbjct: 410 IQENNPAFKFDSTDKAFALGAALDLLEKNGAAHLLSEPSVLCTNNKEAEIYVGQTRSILT 469 Query: 469 GSQ--TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-NSTLGPT 525 +Q TT+ NV N R+ +G LKV P+++ + V LE+E + +D SS PT Sbjct: 470 QAQQSTTAISNVINNYSREDIGLTLKVKPRLSSNNQVTLEVETVLEDIDPSSEQVEDRPT 529 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ-LFRYTSTERAKRN 584 RT++ +V+ GE ++LGGL+ + +SKVP LGDIP++G+ LF +T ++N Sbjct: 530 TTKRTVKTNAIVRNGEMIILGGLIKRAGGKNISKVPFLGDIPVLGEMLFTHTGDVEREQN 589 Query: 585 LMVFIRPTIIRDDDVYRSLSKE---------KYTRYRQEQQQRIDGKSKALVGSEDLPVL 635 +++++ P I+R + L + +Y R ++ ++ GK + +P Sbjct: 590 VVIYLTPYIVRKSGDLQKLKEMLAELEEVQVRYNRLVEQALEKNKGKHHSSPAKALVP-- 647 Query: 636 DENTFNSHAPAPSS 649 + P P+S Sbjct: 648 ----KTEYVPEPAS 657 >UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUV6_SYNAS Length = 717 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 153/626 (24%), Positives = 271/626 (43%), Gaps = 64/626 (10%) Query: 25 NEQYGANFNNADIRQF-VEIVGQHLGKTILIDPSV---QGTISVRSNDTFSQQEYYQFFL 80 N+ N + F + +G+ L ++D + + I++R L Sbjct: 117 NQPVTLNAERVPLSDFVIYALGETLKVAFVMDEKMMNNKKPITIRMPQAMPPDRALNVIL 176 Query: 81 SILDLYGYSVITLDNGFLKV-VRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 +L+ + + V I SS D + +IVPL ++ +D Sbjct: 177 GLLEKERIYLEERAGALYVLEVPPEPRSPVDVRIGVSSVDSPAD--ILQIVPLLHIRPQD 234 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQIIHL 197 + PL++ + + + Y NV+IL GRAS + ++E I DV + +I L Sbjct: 235 VEPLIKDLFRSDV--EIKPYTRENVMILHGRASRMRPVLEFIATFDVPYLRDKNLLLIRL 292 Query: 198 EYASAEDLAEILNQLI-SESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR-ITSLL 255 Y E+ L +++ ++MP + K+ N+++ P+ R I Sbjct: 293 TYWQTEEFISQLTKILEGLGFAVARMPKEPGPYFLPVKQLNAVLAVCPDGQTARTIRGWK 352 Query: 256 KSLDVEESE--EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV-- 311 + LD E+ E T + KY++AT+L+E + + + +P++ V Sbjct: 353 EKLDTPEAAGTEFKTYTFIPKYSRATDLLESIQKLYGSMPSSDSRMVQPAALTTPRGVPA 412 Query: 312 ---------------AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 ++AD++ N ++I + V L ++ LD+ QVL+EA IVE Sbjct: 413 RPGSDRGDAFDAAGLRMSADDRKNMIIILSKPDVYRNLLNLLQALDVPARQVLIEATIVE 472 Query: 357 VQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 + + L GV+W +N +G + + Sbjct: 473 LTLTDELKYGVEWFIRN-----------------------SWDGDSYTLGTLGKLGLEPL 509 Query: 417 GMAAGFFN--GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS---- 470 G+ F + G + L++ALA +K +IL+TP ++ LDN A+ VG+DVP ++G Sbjct: 510 GLTYAFLSRTGQFEALISALAEKSKANILSTPRLMVLDNMEATIQVGKDVPTVTGQISTL 569 Query: 471 ---QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFN 527 TT +V +++ ++ G LKV P +N + LEI QEVS + + P Sbjct: 570 DSVNTTDSTSVSQSIQYRSTGVMLKVKPTINTEGLMTLEITQEVSDIAETPGVGDSPIIL 629 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 TR I +++ G+T+VLGGL+ + SKVPLLGDIP++G LF+ TS + K L+V Sbjct: 630 TRRINTSIIAAHGQTIVLGGLMQENQSLGESKVPLLGDIPILGNLFKATSKTKDKTELLV 689 Query: 588 FIRPTIIRDDDVYRSLSKEKYTRYRQ 613 + PTI+ D + ++ + + Sbjct: 690 LVTPTILTDPNDAVKITDQLRKELKW 715 >UniRef50_D0LLW3 General secretion pathway protein D n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLW3_HALO1 Length = 842 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 165/663 (24%), Positives = 294/663 (44%), Gaps = 62/663 (9%) Query: 26 EQYGANFN-NADIRQFVEIVGQHLGKTILIDPSVQG---TISVRSNDTFSQQEYYQFFLS 81 +F +++ + + + + G +++ + + Q+ + FL Sbjct: 83 GPVSVSFKPEVELKDLITWAMGFTCRNFVYGAGIGGRSSQVTIIAPKRMTPQQAWGVFLV 142 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 L+ +V+ N L +V SA P I P +LV +V E++PA +LA Sbjct: 143 ALETMNLTVVPHGN-VLTIVESAQAGKQPLPIYRRGAPAANAQLVRMVVRPEHLPAEELA 201 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE--Y 199 L + G V +N+LI+T TI+++ +I+ VD + ++ + Sbjct: 202 RALDGLKSQH--GAVTPLASANMLIVTDYGHTISRMRTLIREVDQPLAGE-RLYLIRVRN 258 Query: 200 ASAEDLAEILNQLIS-----------------------------ESHGKSQMPALLSAKI 230 A A ++A L +++ +S S++ A + +KI Sbjct: 259 ADATEMATKLQEILGVQEQGRQASSPPTSRTRRRRGDRDAEVQVDSGDASEVSAAVPSKI 318 Query: 231 VADKRTNSLIISGPEKARQRITSLLKSLD--VEESEEGNTRVYYLKYAKATNLVEVLTGV 288 + D+RTNSLI+ + A QR+ SL++ LD ++ G VY L++ A + LT Sbjct: 319 IPDERTNSLILVSSQAAYQRVRSLIERLDVGIDGGGSGRIHVYPLEHGNAEEIANTLTSA 378 Query: 289 SEKLKDEKGNARK---------------PSSSGAMDNVAITADEQTNSLVITADQSVQEK 333 + + A + V +T D TN+LVI A Sbjct: 379 ISGISQQTTGAGARNNPRARNARAQTGDSGAPAFEGQVRVTHDAPTNALVIVASVKDFFA 438 Query: 334 LATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGV 393 L VI +LD R QV +EA+I+EVQ +GL+LG + + G + Q + Sbjct: 439 LRDVIEKLDTPRRQVFIEAMILEVQTDSGLDLGASFHGGQLSDDGTLLLGGLQTSDLQSI 498 Query: 394 ADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDN 453 + G +GVL ALA+++ ++L++P IVT +N Sbjct: 499 VPGTLAASSGLLGGVLGPLLNTQEL-LGVSIPSFGVLFQALATSSNVNVLSSPHIVTTNN 557 Query: 454 KLASFNVGQDVPVLSG-----SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIE 508 + A +VGQ++P SG + T +V+R+ V LK+TP +N D V LEI+ Sbjct: 558 EEAEISVGQNIPYQSGLSGLPTAGTGVSFPVQSVQRQDVALTLKITPHINASDMVTLEID 617 Query: 509 QEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPL 568 QE+S + S + LGP+++ RT++ V+V+ +++V+GGL+ D SKVPLLGD+PL Sbjct: 618 QEISDIASPDFAGLGPSWSKRTVKTTVVVRDQQSIVIGGLMSDRMTYNESKVPLLGDLPL 677 Query: 569 VGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVG 628 +G F++T +++K NL++ + P +I+ + + K ++ + + + Sbjct: 678 LGYFFKFTERQKSKTNLLILLTPYVIKGQMDIEQIVQRKTRESQEFARTFSNLERTPFRP 737 Query: 629 SED 631 D Sbjct: 738 EID 740 >UniRef50_B7S1V0 General secretion pathway protein D n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1V0_9GAMM Length = 727 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 154/659 (23%), Positives = 278/659 (42%), Gaps = 91/659 (13%) Query: 25 NEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + NF A + + I+G L ++D +QG +++R+ + + S+L Sbjct: 85 GDDVSLNFEQAPLSEVTHAIMGDILELDYVVDHPIQGQVTLRTRTPIPRDQLLGVLESLL 144 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 +I +G V SA +++ G V IVPL+ + A+++A + Sbjct: 145 KANNTIMIRGSDGRYLVTGSARGTKLSPSVSNPRDNIAGYSTV--IVPLQFISAKNMAEI 202 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYAS 201 L+ + D + + N+L+L G + ++ ++++ DV + + LE + Sbjct: 203 LKPVADESAFVRI--DSSRNLLVLAGTRTQLDGWLDMVSTFDVDQLKGMSVGLFPLENSE 260 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK-ARQRITSLLKSLDV 260 ++ + L+ ++ + S M ++ ++V R NS++I P + ++ LD Sbjct: 261 VAEVVDALDAIMGTTQDGSSMKDMI--RVVPVDRLNSILIVTPRAHYLGTVEKWIERLDE 318 Query: 261 EESEEGNTR--VYYLKYAKATNLVEVLT-----GVSEKLKDEKGNARKPS---------- 303 + R VY ++ A+ L +++ G S +G R S Sbjct: 319 AHYSALDRRLYVYPVQNTTASRLSDLINSIYSGGQSSGRSQSRGGYRDSSGVAPGLSPET 378 Query: 304 ------------------------------------------SSGAMDNVAITADEQTNS 321 S V + AD++ NS Sbjct: 379 LGSSRGMGSSNRGGSSNRMGSGRSSGNTGSSVANVNMEGVTGSGDETAEVRVVADDENNS 438 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 L+I A + + T + +LD+ QV++EA I+EV + L G++W N Sbjct: 439 LMIYATSMQYKVIKTALDQLDVVATQVIIEASIIEVSLTDELRYGLEWTFSNSLG----- 493 Query: 382 TGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN--GDWGVLLTALASNNK 439 ADY +G ++S A S G + N G+ +L ALA + Sbjct: 494 ------------ADYDGSGFLSSIAGAESPASIVPGFSYTVTNSIGNVSAVLNALAEESL 541 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVL---SGSQTTSGDNVFNTVERKTVGTKLKVTPQ 496 +I++TPS++ LDN A +VGQ VP++ +GS D V ++ + G KL V P Sbjct: 542 LNIISTPSVMVLDNHYAYIHVGQQVPIIDSQTGSLANDTDRVTQSITYRDTGVKLDVRPS 601 Query: 497 VNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQ 556 VN G + +++ Q V+ V +T F R I++ V V++ E+VVLGGL+ + S Sbjct: 602 VNAGGLITMDVAQSVTDVGEIDAATGQRAFLERNIESRVAVRSNESVVLGGLIRENSGTA 661 Query: 557 VSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 VP L +P+VG LF S + L+V I P + ++D RS+S+E ++ R + Sbjct: 662 SQGVPWLHSVPIVGSLFGTDSARSNRTELLVIITPRALYNEDELRSVSEEMRSKIRNLE 720 >UniRef50_C0GQP0 General secretion pathway protein D n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQP0_9DELT Length = 703 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 140/631 (22%), Positives = 260/631 (41%), Gaps = 58/631 (9%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 AE +F +AD+ + + + Q L + LI P V G +S+ D F+ ++ + Sbjct: 93 AEARDVSFSFYDADLVEVIRVFMQLLEEDYLIHPGVSGRVSLFVKDRFNARQMLGVLEGV 152 Query: 83 LDLYGYSVITLDN--GFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDL 140 L + ++I D FL + R +I + + L+ + A+++ Sbjct: 153 LRVNNAAMIRSDQILEFLPLSRVPGHIPGELIILPDREELPRRGQIIQGFGLDFIAAQEM 212 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD--VIGTEKQQIIHLE 198 ++ + + V +E VL+++ ++ K+ +I D + ++ L Sbjct: 213 VNIIEPHLSGDA--RVYAHEEKGVLLVSDYPHSLEKVSRLISLFDESIFADVLARVYPLR 270 Query: 199 YASAEDLAEILNQLISE-SHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLLK 256 Y A + A+ L ++ + ++ + +R N ++ ++ E + + ++ Sbjct: 271 YIEAGEAAQKLENILERFGMDRDRVGRQARVSFLPLERLNMVLAVTRSETVLSFVQAWVE 330 Query: 257 SLDVE------ESEEGNTRVYYLKYAKATNLVEVLTGV----------------SEKLKD 294 LD S N VYY++Y A +VE L GV SE + Sbjct: 331 GLDRPVPEHILGSAGENIYVYYVQYGDAEEIVESLRGVFDQGVEADSEVGREAVSEVASE 390 Query: 295 EKGNARKPS--SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEA 352 + + P S V T D TNS++ ++ +V+ +LD+ QVL+E Sbjct: 391 DDQDVFAPGMVSGELAGPVRFTVDRATNSIITRCRAPDYARVLSVMEKLDLYPKQVLIEV 450 Query: 353 IIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMF 412 II EV+ + +GV W + + G +PA D Sbjct: 451 IIAEVRLSDATKMGVDWQYILSFGDRLS--------------------GELRFDPAADAL 490 Query: 413 SAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ- 471 G+ + L A + K IL+TP+++ DN+ A+ N+G VP + ++ Sbjct: 491 PGAGGVFRVESSRRLKAALYAAVDDAKLQILSTPTLLASDNRPATINIGDQVPFPTSTRQ 550 Query: 472 ----TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-NSTLGPTF 526 T + + + T++ + G L+VTP++N V +EI QEVSS+ + P Sbjct: 551 RLDDTDTSEVIDTTIQYRDTGIILRVTPKINRHGMVRMEIVQEVSSLTARRVEGITAPVI 610 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 NTR + + V ET+V+ GL++ S VP IP+V LF + T L+ Sbjct: 611 NTRHAETTLAVDDQETIVIAGLMEQERSRGYSGVPGFRRIPVVKHLFGTSETRFENTELL 670 Query: 587 VFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 VFI P +I + L++ TR + +++ Sbjct: 671 VFITPHVIMSREDSGFLTRNFLTRLEELKER 701 >UniRef50_Q82WH1 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Nitrosomonas europaea RepID=Q82WH1_NITEU Length = 697 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 153/644 (23%), Positives = 276/644 (42%), Gaps = 67/644 (10%) Query: 20 AGHAENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A E++ NFN ADIR +++V G+ L ++ P+VQG I++R++ S+ Sbjct: 82 AFADTGERFELNFNEADIRGVIDVVLGEMLKLDYVVSPAVQGRITLRTSRPVSKASLLSA 141 Query: 79 FLSILDLYGYSVITLDNGFLKVVR--SANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 + L +VI D + V+ A + P S+ P I+PL + Sbjct: 142 LEAALGTVS-AVILKDEQTISVLPWSEAPQRVRPAQRFASAMPPTP-GYAVEIIPLRYIN 199 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 A D+ +L + G V + L++ G + ++ I+ DV Sbjct: 200 ANDMQAILDSFVPKGIV--LQADTRHGHLVVAGSSQDRGAILHTIENFDVDWLNGM-TFA 256 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLL 255 L S L I+ +L G+ + +V +R +++ ++ + + + + Sbjct: 257 LYKLSQSRLEAIVTELREIFQGEIDL-FTTRIHLVPLERMQAVLGVAQNKSDLELLREWI 315 Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS------------------------EK 291 + LDV + VY ++ A +LV L V + Sbjct: 316 ERLDVSKLGAQRIFVYNVQNGNAKDLVAPLRQVLTGEMQATTASGTTVSPTSTPMSTPQM 375 Query: 292 LKDEKGNARKPSSSGAMDNV-AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 + +PS SG+ NV + A E+ NSL+ + + + ++D+ QV++ Sbjct: 376 PAAAPSLSAEPSISGSQTNVGRLVAIEENNSLMFYGTEDEFRVIQEALKQIDVLPRQVMI 435 Query: 351 EAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWD 410 EA + EV N L GVQW D +N SA Sbjct: 436 EAFLAEVTLNNNLRYGVQWFF-----------------------DSGENTVTLSATDVGS 472 Query: 411 MFSAYNGMAAGFFN-GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 + S + G + + + ++L AL S + IL+ P I L+N+ AS VG VP+++ Sbjct: 473 VASQFPGFSYIYAGKANARIVLNALQSKTEVKILSAPKISVLNNQKASLQVGDQVPIVTQ 532 Query: 470 SQTT---SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPT 525 + SG V NT++ + G L+V P+VN+ V+L++ QEVS V +++S + PT Sbjct: 533 TSQGTVVSGAPVINTIQMRDTGVILEVIPRVNDNGNVILDVTQEVSEVAQTTSSGIDSPT 592 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 R I + + + G TV LGGL+ + S VPL+ D+P++G LF+ +++ + L Sbjct: 593 IQRRKIHSVIATRDGFTVALGGLIRENGSAGNSGVPLIKDVPVIGNLFKSNTSDIRRTEL 652 Query: 586 MVFIRPTIIRDDDVYRSLSKEKYTRY----RQEQQQRIDGKSKA 625 +V + P ++R+ +S++ R ++ R+ S+A Sbjct: 653 VVLLVPHVMRNQMETQSVADALVDGLEAASRLAERARLPAPSRA 696 >UniRef50_B0T7N8 General secretion pathway protein D n=1 Tax=Caulobacter sp. K31 RepID=B0T7N8_CAUSK Length = 681 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 144/637 (22%), Positives = 268/637 (42%), Gaps = 80/637 (12%) Query: 24 ENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 + NF +R+F + V G L + + GT+++ + ++ + Sbjct: 76 SSGPVALNFPGVGVREFAQAVLGDILHLPYAVSAAASGTVTLVTPRPIARADVLPAVEEA 135 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L G ++++ D G ++ + + G+ + +PG G E V L + L Sbjct: 136 LRNVGLALVSRD-GVQTIMTLGDARAQ-GLTVGADQPGFGSETV----ALRFAGPQALKT 189 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHLEYA 200 LL ++ +N L+L+G A + +++++ DV + + ++ Sbjct: 190 LLDPIVPG---VITSADPATNTLVLSGSAGQRRAVRDLVQQFDVDWLKGMSFGLYVPKHT 246 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLLKSLD 259 A +A L++LI+ P ++VA ++ N ++ IS + + + ++ LD Sbjct: 247 DARLIAPELDKLINAPG----SPMAGRVRLVAMEKLNGIVAISSQPQYLEDVNRWIEVLD 302 Query: 260 VE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS--------------- 303 E +S E VY ++ +A++L VL + A + Sbjct: 303 REGQSTERRLFVYRVQNGRASDLSRVLASAFGRGGGSSAAAPGGNRPALDRLGVEAAASP 362 Query: 304 ----------------------SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 + G D + T+DE N++V A + + +L Sbjct: 363 LLAPSNGQTLPGQSPAPAAPDMAGGPADGLTFTSDETNNAVVAYATPREYALIEDALRKL 422 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 D+ QV++EA++ EV + L G QW ++ + + G Sbjct: 423 DVVPLQVVIEAVVTEVSLNDALRYGSQWFIRSGDDRAILSRGK----------------- 465 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 D S + G L AL+S ++L+ P+++ L+N+ AS VG Sbjct: 466 ------TADPASTFPGFTYLLNRSSIAATLDALSSVTHVEVLSAPNLMVLNNQTASLEVG 519 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST 521 VPV +GS S V +++E + G LK+TP+VN G VLL+I QEVS V + +ST Sbjct: 520 DQVPVSTGSALNSSS-VISSIEYRDTGVLLKITPRVNSGGLVLLDIAQEVSDVSPTLSST 578 Query: 522 L-GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTER 580 + PT + R I ++ V+ G+TV LGGL+ D +K + VP L +P++G L R Sbjct: 579 IDSPTISVRKIATSIAVQDGQTVALGGLIRDNNKRLRNGVPFLSAVPVLGALAGSRDNSR 638 Query: 581 AKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 + L+V + P ++R+ ++++ E + R Q Sbjct: 639 ERTELLVLLTPRVLRNSGDIQAVTDELREKIRSISPQ 675 >UniRef50_A6DDM8 Type II and III secretion system protein:NolW-like protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDM8_9PROT Length = 579 Score = 365 bits (936), Expect = 4e-99, Method: Composition-based stats. Identities = 153/580 (26%), Positives = 272/580 (46%), Gaps = 43/580 (7%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 N + NF N DI F+++V + K ILI + G ++ S ++E Y L+IL Sbjct: 15 NAKVNLNFQNLDINDFIKMVAKITNKNILITQPISGKVNFVSVKPIDEKEVYSILLNILR 74 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 GY++I DNGFLKV+R + + D++ T I+ L N+P R+ + Sbjct: 75 SRGYTIIK-DNGFLKVIRESQAIKEGPQLNPHF-----DQIQTNIIKLNNIPVRNAFNAV 128 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 + + G +V N+LI+T S + + EV+KR+D T+ + I L S + Sbjct: 129 AYL--KSNYGRIVINSDKNMLIVTDYPSNLKVIKEVLKRIDSKETKSLRNITLNNTSIDK 186 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD-VEES 263 + LNQ+ + + S KI+ + +NS+I+ G + ++ ++KSLD + Sbjct: 187 VYPKLNQIATTLFNTK----IYSYKIIPNDVSNSIILVGQKNVVYKLARVVKSLDVKPKQ 242 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV 323 T+V LK + ATN+ ++L + + + + +IT D++TNS++ Sbjct: 243 LNQITKVITLKNSDATNIAKILQNIVKTKYKK-------------NPPSITLDKETNSII 289 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG 383 I A E + T+I LD + QV V+A I+E+ + +G + Sbjct: 290 ILATPEQIETIKTIINALDTPKEQVYVKARILEISNTKAAQIGNRLGLYAGSGTTSGLYT 349 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 L +A + G+T + G L L + L Sbjct: 350 LSANLGGPAIAFDVASLGLTIPTIKQGIA--------------LGATLDLLETYGAAKKL 395 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAV 503 + PSI+ ++N ++ VG+ V VL+G T++ + T R+ +G LKV P+++ + V Sbjct: 396 SEPSILCINNTPSTIYVGKTVSVLTGKTTSTTTSESYT--RQDIGLTLKVKPRIDSDNKV 453 Query: 504 LLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 L ++ + + S + P + RTI +V+ G+++++GGL+ D ++KVPLL Sbjct: 454 ALNVDAVIEDLLPGSPVNM-PITSKRTINTTTIVRNGQSIIIGGLVRDNKDITLNKVPLL 512 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 GDIP++G LFR+ + K L++ + P I++ D L Sbjct: 513 GDIPILGALFRHKQINKDKTTLVIVLTPYIVKKSDDLEKL 552 >UniRef50_B4U6K2 General secretion pathway protein D n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6K2_HYDS0 Length = 660 Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats. Identities = 152/659 (23%), Positives = 280/659 (42%), Gaps = 71/659 (10%) Query: 1 MKGLNKITCC----LLAALLMPCAGHAE------NEQYGANFNNADIRQFVEIVGQHLGK 50 MK L KI C +L ++ H + N NF N I + + + GK Sbjct: 1 MKILRKINCLNIFSVLWIFIVFGMAHGKGKTKYLNNMVVLNFQNQSIDDIAKFMSKLTGK 60 Query: 51 TILIDPSVQG---TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVK 107 TI+I ++G I+V S S ++ + FL+ L L GY+V+ N F K++ Sbjct: 61 TIVI--GIKGNLPKITVSSKKPVSVEDAWHLFLTSLALDGYTVVKYKN-FYKILPLKEAS 117 Query: 108 TSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLIL 167 + + + P + T I + ++ L +R + GN Y PSN LI+ Sbjct: 118 SFSTSVTKKAFPSPS--IETYIY-FAHTNSQILLNAVRPFLSQ--YGNATVYMPSNALII 172 Query: 168 TGRASTINKLIEVIKRVDVIG-TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALL 226 + +++K+ +++K +D+ ++ + +A + + L+ L + K +P ++ Sbjct: 173 SDIGVSVDKIQKLLKSIDIPNLAFSLKMYQTKDTNA--VVKALSPLANPVSQKFGIPMVV 230 Query: 227 SAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE-EGNTRVYYLKYAKATNLVEVL 285 S+ ++ +++ P+ + I ++ ++ S + V L+ A + + L Sbjct: 231 SSVQKKHSKSGFVLVYAPKLMQASIKEIIHKINESASHFRRHYYVIPLQNASVGEMAKTL 290 Query: 286 TGVSEKLKDEKGNARKPSSSGAM---------------------------------DNVA 312 + ++P+ + D Sbjct: 291 ASLFGSASAISSTTKRPTPNLNTMQNQPQTIQSNVPPNQNINVISSNKPIGSIYLSDGTR 350 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 I D TNS+++ A +S E L +I +LD +R QVL+ A +VE L GV W Sbjct: 351 IGFDRATNSVILYATKSQYENLKNLIKKLDEKRIQVLIAASVVEANLTKQLTTGVNWQAL 410 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 N + QG+ G+TS++ + N D V L+ Sbjct: 411 GKNGGIGFNP-ASLQTIYQGLLSGNFVVGVTSSSSI-----SANVGGNTIIFPDLAVFLS 464 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLK 492 L N I++ P ++TLDN+ A Q P ++G+Q T + K +G +L Sbjct: 465 LLEQGNGFKIISNPKVLTLDNEEAIIKEAQVYPYVTGTQYNINGFPILTYDYKDIGLELD 524 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG------PTFNTRTIQNAVLVKTGETVVLG 546 V P V++ + + L I + + +N+ + P R + + V+VK+G+TV+LG Sbjct: 525 VIPTVSKDN-IRLGINLNLQDITGFTNTNVAGQTVPIPITTDRVLNSEVVVKSGQTVILG 583 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GL+ + + + +S +P+L DIP++G LF+Y + E K L +FI P II+ D ++K Sbjct: 584 GLVSNNTIKNISGIPILQDIPVLGNLFKYQNRENKKSTLFIFITPYIIKSPDQLAKITK 642 >UniRef50_B9L741 Putative GspD n=1 Tax=Nautilia profundicola AmH RepID=B9L741_NAUPA Length = 580 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 129/581 (22%), Positives = 266/581 (45%), Gaps = 41/581 (7%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 ++ F N +I F+++V + K IL+ ++G ++ S ++ E Y L+IL Sbjct: 15 YAQKIDLTFKNLEINDFIKMVAKITNKNILLTNDLRGKVNFISVKPVNENEIYDILLNIL 74 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 GY++I ++G+LKV++SA+ I S ++ T I+ L N+ A+ Sbjct: 75 RSKGYTLIK-EHGYLKVIKSADAIKEAPPIGKSDI----YQIRTDIIKLHNISAKTAYTQ 129 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 + + G ++ + N+LI+T + + +++ ++D + +L+ Sbjct: 130 INYLKSK--YGKIILNKDKNLLIITDYPKNLKIMKKLLSKIDTLDKPDIIFFNLQNTQLS 187 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD-VEE 262 + + ++ + + KI+ + +N +I+ GP K Q+I +K LD + Sbjct: 188 KIYPKITEISNTLFN----DKIYKYKIIKNDNSNGIILVGPNKVIQKILQHIKQLDTKPK 243 Query: 263 SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSL 322 + T + LK + TN+ +++ + + + +IT D++TNSL Sbjct: 244 QLDQVTEIITLKNSDVTNMAKIIQKIVSLKYKK-------------NIPSITEDKETNSL 290 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNT 382 +I A + + T+I LDI + QV V+A I+E+ + +G +G + T Sbjct: 291 IIIATLEQMDTIKTIIKALDIPKMQVYVKARILEISNLKASQIG-----NKLGLYAGSGT 345 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDI 442 G ++ + + +TS + + G+A G + L + Sbjct: 346 GSGLYTLSANMGGPAIAFDVTSL--GLSIPTIRQGLALG-------ATIDLLETFGAAKK 396 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDA 502 L+ PSI+ ++N ++ VG+ + V +G T++ +V + R+ +G L++ P+++ + Sbjct: 397 LSEPSILCINNTPSTIYVGKTISVKTGQTTSTSTSVSYS--RQDIGLTLEIKPRIDSDNK 454 Query: 503 VLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPL 562 V L ++ V + S PT + R I+ +V G+++++GGL+ + + KVP Sbjct: 455 VSLNVKAVVEDILPGSPDLTLPTTSKRDIKTTTIVSNGQSIIIGGLVRNNKDITIKKVPF 514 Query: 563 LGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 GDIP++G LFR+ K L++ + P I++ L Sbjct: 515 FGDIPIIGALFRHKEVNEDKTTLVIVLTPYIVKQSTDLDKL 555 >UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKZ0_MARMM Length = 686 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 151/622 (24%), Positives = 272/622 (43%), Gaps = 55/622 (8%) Query: 18 PCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 P ++ NF + + V IVG LG+T+++ V G IS+ S + + Sbjct: 92 PNRADLDSRTLRLNFVDVPVADVVRTIVGDALGQTVMVADGVTGRISLTSAEPAPARAAL 151 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 ++L + G+L + R + PG+ SS G G R+VP+ + Sbjct: 152 AALETVLGESNLVLAERAEGYL-LTRLDMAR--PGLTGLSSELGYGG----RVVPVTHTT 204 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTIN--KLIEVIKRVDVIGTEKQQI 194 + L+ + VV ++ VL+L G ++ + ++ + + Sbjct: 205 PSAIVSLIDPFLSD--RVEVVPHDALGVLVLAGPGPDVDGARRAAILFDRPFLTDRVFGM 262 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG-PEKARQRITS 253 L Y SAE ++ ++S + ++ + + +A R N L+++ ++ Sbjct: 263 FELRYVSAETAKSEVDTVLSGTG-----MSIDAIQTIAMPRLNMLLVTARDRSQFEQAQV 317 Query: 254 LLKSLDVEES-EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP---------- 302 ++ LD + E R Y ++ A+ L +T + G +P Sbjct: 318 WIERLDRPSAGSERRLRYYVVRNTPASTLATQITAAFAGGQTGAGQLIEPRFQGDDAHGE 377 Query: 303 --SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 + + I DE N+L+I A ++ ++ R+D+ QVL+EA I EV+ Sbjct: 378 PSAPGEEQSRLTIIPDELNNALIIRATDQEYREILDLVQRMDVMPPQVLIEATIAEVRLE 437 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 +GL+ GV+W +N G+ + ++ N + G Sbjct: 438 DGLDFGVRWYFENAGSNETSSLQFSDSNTG-------------------STAPVFPGFNY 478 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT---SGDN 477 F D L+AL S +L+ PSI+ +N+ A VG +VP+++ + T+ S Sbjct: 479 AFSGTDLTATLSALRSITDVTVLSAPSIMVQNNQTAHLQVGDEVPIVTQTATSVTESNAP 538 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVL 536 + ++VE + G L+VTP++N V+LE+ QEVSSV ++ S + PT + V Sbjct: 539 IVSSVELRETGVILQVTPRINASGMVVLEVNQEVSSVRPTTTSGIDSPTIQKLEFTSTVS 598 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII-R 595 V++ T+ LGGL+ + + + S+ PLLGDIP VG LFR + + L++F+ P II Sbjct: 599 VRSSNTIALGGLIRETTSDNESRTPLLGDIPGVGNLFRNRAMTSQRSELVIFLTPRIIWT 658 Query: 596 DDDVYRSLSKEKYTRYRQEQQQ 617 DDDV +L+ + E +Q Sbjct: 659 DDDVGSALTHVRRQFEALEARQ 680 >UniRef50_C1DRT4 General secretion pathway protein D n=2 Tax=Gammaproteobacteria RepID=C1DRT4_AZOVD Length = 752 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 156/679 (22%), Positives = 274/679 (40%), Gaps = 81/679 (11%) Query: 25 NEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQGT---ISVRSNDTFSQQEYYQFFL 80 E N NN + F+ E+ G LG + I P +QG IS+R ++ + + + Sbjct: 101 GEPITLNLNNFPLPAFINEVFGNRLGLSFGISPELQGKTDLISLRLSEPQTPADLFATAR 160 Query: 81 SILDLYGYSVITLDNG-FLKVVRSANVKTSPGMIADSSRPGV--GDELVTRIVPLENVPA 137 +L YG +V + F + ++A + P +++ + P V V + +P+ V + Sbjct: 161 FVLSEYGVAVTEREGVLFFQSAQNAPNDSLPLLVSGGALPEVPMSHRPVFQQIPMRVVRS 220 Query: 138 RDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--II 195 + L+ M AGS V SN ++L G I + + I+ D + I Sbjct: 221 DSMVAWLKDMF-AGSSLKVSSDPLSNAVMLRGPIDLIRQASQAIELFDRPALKGSHSLAI 279 Query: 196 HLEYASAEDLAEILNQ-LISESHGKSQMPALLSAKIVADKRTNSLII-SGPEKARQRITS 253 YASA++L L + L +E + S+ P L ++ K LI+ + Sbjct: 280 SPVYASADELGTALVKVLQAEGYDVSENPPLGGVVVLKLKELQRLIVFAADPAILATARQ 339 Query: 254 LLKSLDVEESE--EGNTRVYYLKYAKATNLVEVLTGV----------------------- 288 ++ LD + E E +Y ++ +A + +L + Sbjct: 340 WVELLDRQSQEQVENGLFLYQVRNTQAAGIASMLGALGYSATIPDTGLNTSNTVTPTGAS 399 Query: 289 ------------SEKLKDEKGNARKPSS-SGAMDNVAITADEQTNSLVITADQSVQEKLA 335 S A P+S +G + ++ D N+++ KL Sbjct: 400 TGESLATSGPIRSVTGTGANARASAPTSIAGNPEQGSVVVDANRNAIIYKGSGQEWLKLR 459 Query: 336 TVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVAD 395 ++ LD V+++ ++ EV + LGV W N + IF A G+ Sbjct: 460 PLLEELDRPVPSVIIDVLLAEVNLNDREGLGVDWQN----ITGSLGSKQLIFGTANGIGS 515 Query: 396 YKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKL 455 N ++A G L A NN+ I ++P ++ + Sbjct: 516 SGLN------------------ISALNSAGQTKATLNAFYDNNQAVIRSSPKLMVRSGEE 557 Query: 456 ASFNVGQDVPVLSGSQTTSGDN---VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 A+ VG ++PV++G+ ++ + + TV+ + G L + P V V L+I QE+S Sbjct: 558 ATIEVGNEIPVVTGTTQSTDTDNAPITQTVQYRKTGVLLNIKPTVQASGVVDLKISQELS 617 Query: 513 -SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 S D+ + TL P N R ++ A+ ++ G +V+L GL+ + + VPLLGD+P +G Sbjct: 618 ESTDTGTGDTLTPIINNRRVETALTLRDGGSVMLAGLISSSKGKGDNGVPLLGDLPWIGN 677 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED 631 LF+ S + L+V I P ++RD D + LS+ EQ + S G Sbjct: 678 LFKSQSNSETRTELIVMIIPYVVRDFDEAQDLSRTYR-----EQLSLNNSDSLERRGDHR 732 Query: 632 LPVLDENTFNSHAPAPSSR 650 LP PAP+ R Sbjct: 733 LPPAYAPHATETPPAPAHR 751 >UniRef50_C5SIE2 Type II and III secretion system protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIE2_9CAUL Length = 626 Score = 354 bits (909), Expect = 5e-96, Method: Composition-based stats. Identities = 155/651 (23%), Positives = 281/651 (43%), Gaps = 66/651 (10%) Query: 1 MKGLNKITCCLLAALLMPCAGHAEN------EQYGANFNNADIRQFVE-IVGQHLGKTIL 53 MK C + + ++ A+N + NF +ADI Q E I+G LG + Sbjct: 6 MKATGLAVCLTMTSGMIVSPVMAQNTAQPRPAAFSYNFKDADIAQVAEEILGNGLGVSYR 65 Query: 54 IDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMI 113 +DP V G ++ R + ++ + F L+ Y +++ VVR + I Sbjct: 66 VDPGVSGKMNFRIDQRLTKPQLLAAFEGALNAYDMAIVREGETL--VVRPIANASVGAAI 123 Query: 114 ADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAST 173 D S R VP++ A ++A +L + V + + ++++L G A Sbjct: 124 NDGSSRLSRVGYQVRAVPIQYAAASEVAKVLESLSREKLV--LFSSDKLSLILLGGTADE 181 Query: 174 INKLIEVIKRVDV--IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIV 231 I + I+ D + + + L ASA +A L +++ S S I Sbjct: 182 IESAMSSIRLFDQSTLSEARIRFFSLRNASATTVAGDLEKMLKASG-------TGSVTIA 234 Query: 232 ADKRTNSL-IISGPEKARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLT--- 286 KR N + S ++ ++ + LDV +++ + VY + A L L Sbjct: 235 PMKRLNGVFAFSRSKEVLDELSGWVTRLDVPSTDQALSFLVYRPRGVSAEALARTLNQLL 294 Query: 287 GVSEKLKDEKGNARKP--------------SSSGAMDNVAITADEQTNSLVITADQSVQE 332 G+S E +R+ +++ N+ I AD++TN+++++A ++ + Sbjct: 295 GLSSVASRETSTSRETPAGESATTATASEATNTNTDSNIRIVADKETNTVIVSAPEAERV 354 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG 392 ++ +V+ +D AQV +EA IVEV N + GV W N T Sbjct: 355 RIQSVLNEVDREPAQVTIEASIVEVTLNNEFSFGVDWQTINGALSLSNYT---------- 404 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLD 452 + + G + + D L AL+S +K I++ P + + Sbjct: 405 -------------TDSTSLAPQAPGFSVNYLRSDIKAALNALSSKSKVRIVSAPKMTARE 451 Query: 453 NKLASFNVGQDVPVL-SGSQTTSGDN--VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQ 509 N AS +G VP++ SQ+T+G N + +T++ + G LKVTP+V + V +++ Q Sbjct: 452 NATASLQIGDQVPIVKQNSQSTNGGNAPIVSTIDYRDTGVTLKVTPRVLNDNRVAMDVTQ 511 Query: 510 EVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPL 568 EVSSV + S + PT R +++++++ G V LGGL+ + PLL DIP Sbjct: 512 EVSSVARTQTSGIDSPTIKQRKLESSLIIPEGTVVALGGLISSSESDSEGGAPLLKDIPG 571 Query: 569 VGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRI 619 +G LF+ + + + L+V I+ TI+RD + ++ R +R+ Sbjct: 572 LGNLFKQRARNKDRTELIVLIQVTILRDPAAFNRQWEDFGADIRDLAGRRL 622 >UniRef50_A6FZI7 Type II and III secretion system protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZI7_9DELT Length = 777 Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats. Identities = 163/632 (25%), Positives = 282/632 (44%), Gaps = 41/632 (6%) Query: 33 NNADIRQFVEIVGQHLGKTILIDPSVQ-GTISVRSNDTFSQQEYYQFFLSILDLYGYSVI 91 A++ Q V+ + + + + ++ G +++ S + + +E Y F + ++ G +V Sbjct: 82 REAELEQLVQWMMTISCQKFIWNGKIRSGKVTILSPEKVTLREAYAAFYAAIESMGLTVE 141 Query: 92 TLDNGFLKVVRSANVKTSPGMIADSSRP-GVGDELVTRIVPLENVPARDLAPLLRQMMDA 150 + + K+V SA+ K+ + + RP D VT++V +++ D+ + ++ Sbjct: 142 PTGD-YFKIVESADAKSLNLPVYEDGRPVPNNDRYVTQLVRIKSGSTADITAVAGKLKSK 200 Query: 151 GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII--HLEYASAEDLAEI 208 VV N+LI+T R S + +L+++IK +D G ++I L+YA AE++A+I Sbjct: 201 QGSVEVV----GNLLIITDRGSVVRRLLKIIKELDEGGGTGEKIFFYQLQYADAEEVAQI 256 Query: 209 LNQLISESHGKSQM---------PALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD 259 + + ES G S+ P ++++ D RT +LII+ E I L++ LD Sbjct: 257 VRDVFGESSGSSKTSKTKKKSSTPEANFSRVIVDPRTGTLIITTSESDYATILKLIQQLD 316 Query: 260 VE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK---------DEKGNARKPSSSGAMD 309 V G V L+ A L +VL +++ ++ A S+ Sbjct: 317 VRLPGGGGRIHVKQLRNADPKELAQVLQSLTQGGGGGSAAKKGGNKAATAGGASAELFSG 376 Query: 310 NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW 369 +V ITADE T SLVI A + + L +I LD R QV +E ++E G L G Sbjct: 377 DVKITADEATRSLVIIASAADYKSLEPIIDELDRDRKQVYLEIYLLEASVGRSLTTGAGA 436 Query: 370 ANKNVGAQQFTNTGLPIFNAAQG-----VADYKKNGGITSANPAWDMFSAYNGMAAGFFN 424 Q + I ++ + G+ + + Sbjct: 437 HFAGQFGQGEQQSVGLISSSPSPDVSSILLSPAALSGLAGGLIGPQLIGTGAQLGLERDI 496 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-----NVF 479 +GV++ AL SN+ +I+A P I T DNK A VG+ VP Q Sbjct: 497 PAFGVVIQALQSNDDVNIVAEPHIYTADNKEAQIEVGRKVPTPGALQFGGAGGGTSLTPL 556 Query: 480 NTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQ-NAVLVK 538 ++ R+ V +KVTP V + ++ L+IE E V + LG T R I+ VL + Sbjct: 557 QSINREDVTLDIKVTPHVKDETSLTLDIELEDRDV-VDQDPVLGVTTTKRRIKLENVLAR 615 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 VVLGGL+ + E +VP LG IP++G LF+ ++ K NL++ + P ++ D Sbjct: 616 DDLPVVLGGLMRERELENTQQVPGLGSIPILGWLFKRRVKQKEKINLLIVLIPHVVETAD 675 Query: 599 VYRSLSKEKYTRYRQEQQQRIDGKSKALVGSE 630 R + E+ TR R E +R + + + Sbjct: 676 DIRRI-HERRTRERMEFLERETSFKRRDLDTN 706 >UniRef50_Q1YMS0 Putative general secretion pathway (GSP) protein D n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMS0_MOBAS Length = 700 Score = 351 bits (901), Expect = 4e-95, Method: Composition-based stats. Identities = 146/641 (22%), Positives = 275/641 (42%), Gaps = 69/641 (10%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFS 71 A L P + + NF A I + VE I+G+ LG +DP V G +++ + + Sbjct: 78 APPLPPGVSASSVGEVNLNFQGAAIPEVVEAILGEALGIGYTLDPDVTGEVTLSTARPVA 137 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP 131 + + S+L G +++ ++ A+ +P + + G L ++P Sbjct: 138 RDDLLAILESVLSGNGLALVKAGE-LYRITTDASTAATP---IERGQATAGHGL--SVIP 191 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 L+ V A+ L L+ A G+V + N+LI+ G + D + Sbjct: 192 LKYVSAQTLTRLIDGF--AIRPGSVRVEKTRNLLIVAGSGEARRTAVGTALSFDTDWMQD 249 Query: 192 QQI--IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR- 248 Q + + L E + L ++ G+S + + +A R ++++ + Sbjct: 250 QSVAILPLRATKPETIIPELTRVFGSRSGESSEDVI---QFMAMPRLKAVLVVSQSRGLV 306 Query: 249 QRITSLLKSLDVEESE-EGNTRVYYLKYAKATNLVEVL---------------------- 285 +R + + LD E + N VY +KY A L E+L Sbjct: 307 ERAQTWVSRLDKENPDLNSNVHVYRVKYRDAQKLSELLGRLFSSSAADPAAATEEATPQR 366 Query: 286 ---------TGVSEKLKDEKGNARKPSSSGAMDN---VAITADEQTNSLVITADQSVQEK 333 S L + +S G +D + I D NSLVI D++V+ K Sbjct: 367 DADPSALVEAAFSAPLAGSATSLFLGASGGMLDGATSLRIEPDLSNNSLVIYGDRAVRGK 426 Query: 334 LATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGV 393 + +A +D+ + QV V + EV+ + L GVQ+ K+ + GL + G+ Sbjct: 427 VLQALAHIDVPQMQVAVNVTMAEVRLNDQLRYGVQYFIKS------GDIGLGRDKGSVGL 480 Query: 394 ADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDN 453 +G I P ++ ++L AL + +L++PS+V ++N Sbjct: 481 FRTIADG-IAREVPGFNFVVGSE--------SSPDIVLNALDAVTDVRVLSSPSLVVMEN 531 Query: 454 KLASFNVGQDVPVLSGSQTT---SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE 510 ++A F VG +P+++ + + + + N VE + G + V P++ E V + IEQE Sbjct: 532 EVAKFRVGDQIPIVTRTVNSVEDANAPISNEVEYRDTGIIMNVRPRIAENGVVTMVIEQE 591 Query: 511 VSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 +SSV +++ +L P + R++ + + V G+TV+LGGL+ + S +P L + +VG Sbjct: 592 ISSV-TANAGSLTPVISNRSVASTISVVDGQTVLLGGLISEQSDVGRDGIPGLNRLKVVG 650 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 LF S + L++ IRP++IRD +++++ + Sbjct: 651 NLFGSKSRADVRTELLILIRPSVIRDGRDAQNVAESLRAQM 691 >UniRef50_A4SKW4 S-protein secretion component D n=2 Tax=Gammaproteobacteria RepID=A4SKW4_AERS4 Length = 719 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 136/643 (21%), Positives = 264/643 (41%), Gaps = 91/643 (14%) Query: 26 EQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGT---ISVRSNDTFSQQEYYQFFLS 81 E + + + F+ +G+ L ++D ++Q +++R + S + Sbjct: 90 EPLSLSTDQMPLNNFINLALGEVLDLNYIVDQALQAKTDPVTLRVSKPVSARRLLGLIEE 149 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVK-TSPGMIADSSRPGVGDELVTRIVPLENVPARDL 140 +L + G ++ L++G +KV+ + + T P +++ + +P + V I+P+ +P Sbjct: 150 VLQVNGVAL-ALEDGVIKVIPAEKTRNTVPMLMSGAIQPALRYGKVVEIIPVYYLPLGQA 208 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE-- 198 + +M+ S G V+ N +++ + I+++ +++ VDV + L+ Sbjct: 209 ITIAERMVR-DSDGTVLMQNNLNAIMVVAKKEEIDRIHQLLAEVDVPNRVASHLTVLQPS 267 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA-RQRITSLLKS 257 Y S E+L L + + + M ++ ++ N+L+++ +A K Sbjct: 268 YLSLEELTTDLVKALDAAGVPVTMGKGMNGVVLVPMSNNTLLVTASTRAWLDYTRDWAKR 327 Query: 258 LDVEESEEGN--TRVYYLKYAKATNLVEVLTGV-----------------------SEKL 292 LD G+ Y+LK K + V++ + + + Sbjct: 328 LDKPRPTGGSDGVYAYFLKNTKVADTWPVVSSIFGNGETNTQQKEPGVDLLAEAEKAREA 387 Query: 293 KDEKGNARKP----------------------SSSGAMDNVAITADEQTNSLVITADQSV 330 ++ G AR + S D + D + N+++ + Sbjct: 388 QNSTGTARASDRELSSEPGNSGRAIPKSNNVQTMSVMTDQYRVVVDAKRNAIIFSGRYGD 447 Query: 331 QEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAA 390 ++L ++ +D R QVL++A+I EV+ N +LG +W N N G +GL Sbjct: 448 YQRLIELLQFVDQRPRQVLLQAVIAEVKLTNDSSLGFEW-NVNKGDITGGTSGLIQQTGN 506 Query: 391 QGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVT 450 +A GD A S +L++P +V Sbjct: 507 LNLAG---------------------------VFGDVTAKFAAALSEGNAKVLSSPRLVV 539 Query: 451 LDNKLASFNVGQDVPVLSGSQTTSGDN----VFNTVERKTVGTKLKVTPQVNEGDAVLLE 506 LD + AS +G + V +G + V + + G L++TP +N+ + + Sbjct: 540 LDQETASIKIGDQIVVKTGEISNGSSGNDPQVTTSYKYIDTGLSLEITPSINDDGLIEMV 599 Query: 507 IEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 I QE+SSV + T P N R +Q+ +L +G+TV LGGLL + KVPLLGDI Sbjct: 600 ISQEISSVSAGGGDT--PPINRRAVQSKLLADSGKTVYLGGLLSQSNTNNEEKVPLLGDI 657 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 PL+G LF+Y + + K L++ I P +I + + + T Sbjct: 658 PLLGNLFKYQTKKIEKTELVLLITPYVITSKEEAEFYTDQFRT 700 >UniRef50_A7BV51 Bacterial type II and III secretion system protein n=1 Tax=Beggiatoa sp. PS RepID=A7BV51_9GAMM Length = 442 Score = 343 bits (881), Expect = 9e-93, Method: Composition-based stats. Identities = 172/408 (42%), Positives = 237/408 (58%), Gaps = 18/408 (4%) Query: 243 GPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 G + R R+ +++ LD G+T+V YL+YA+A +LV VL G+S+ L + + K Sbjct: 36 GDKITRLRLRTMITHLDTPVKSIGDTQVIYLRYAEAKDLVNVLKGISDSLVENQKKKGKS 95 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 S N I ADE TNSLVITA VQ+ L TVI +LDIRRAQVLVEA+I E+ Sbjct: 96 PSPEIKTN--IQADESTNSLVITATPKVQQNLQTVIRQLDIRRAQVLVEAVIAEISTDTA 153 Query: 363 LNLGVQW------ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 LGVQW G F N+G I + A N + N F Sbjct: 154 RELGVQWLLYGNKGTAPFGLSNFDNSGTRIADLASAGYLANNNSSTSLPNIGAGAFLGLG 213 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 F N +GVLL ALAS+ ++L+TPS++TLDN+ A VGQ+VP ++G T +G Sbjct: 214 RFNNSFLN--FGVLLRALASDTNTNVLSTPSLLTLDNQEAEIVVGQNVPFVTGQYTNTGT 271 Query: 477 N-------VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTR 529 + F T++R+ +G KL+V PQ+NEG+AV LEIEQEVSS+ SS +T N R Sbjct: 272 SGGGGVTNPFQTIQREDIGIKLRVKPQINEGNAVKLEIEQEVSSLSRSSQATTDIVTNKR 331 Query: 530 TIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFI 589 TI+ V+V+ G VVLGGL+D+ ++ KVP LGD+P++G LFR ST++ KRNLMVF+ Sbjct: 332 TIKTTVIVEDGNMVVLGGLIDEDLQQTAQKVPGLGDLPIIGHLFRSRSTQKIKRNLMVFL 391 Query: 590 RPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 P IIRD +S KY+ R +Q Q+ + L+ E++PVL + Sbjct: 392 HPVIIRDAASENIISSGKYSYLRTQQLQQ-RAQGLPLMPDEEIPVLPD 438 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 15/150 (10%) Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI- 187 I+PL+ + L +++ + V ++ N G T +L +I +D Sbjct: 4 ILPLK---MKALHRIVKTLFKKPVVIVRTSFKKQN-----GDKITRLRLRTMITHLDTPV 55 Query: 188 -GTEKQQIIHLEYASAEDLAEILN----QLISESHGKSQMPA-LLSAKIVADKRTNSLII 241 Q+I+L YA A+DL +L L+ K + P+ + I AD+ TNSL+I Sbjct: 56 KSIGDTQVIYLRYAEAKDLVNVLKGISDSLVENQKKKGKSPSPEIKTNIQADESTNSLVI 115 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVY 271 + K +Q + ++++ LD+ ++ V Sbjct: 116 TATPKVQQNLQTVIRQLDIRRAQVLVEAVI 145 >UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVJ8_SYNAS Length = 601 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 141/501 (28%), Positives = 236/501 (47%), Gaps = 29/501 (5%) Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 + + + + + + + +++ V V+ + R K I + + Sbjct: 109 VTVFSPKQISSDEAYRVFQSVLEIHGYTTV---PSGAVIKILPRKDAREKDIPTFLQDEE 165 Query: 187 IGTEK---QQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 G E +I+ L++ + EDL ++++ L++ P + L+I+ Sbjct: 166 GGREDQLITRIVKLKHGNPEDLKKVIDPLVTRDSIVHAYPP-----------SGMLVITD 214 Query: 244 PEKARQRITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 E QR+ ++ +LD E E VY L+ A A +L +VL + K +P Sbjct: 215 VESNVQRLLKIITALDSELEKNAIVMHVYPLQNASAEDLAKVLINLQPKETAPGSEKGQP 274 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 + S NV I +D+ TNSL+ITA L +I +LD R V +EA+I+EV Sbjct: 275 ALS---RNVQIQSDKATNSLIITASAEDYALLQGLIQKLDSSRPMVYIEALILEVNIVKD 331 Query: 363 LNLGVQW------ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 NLG +W + G+ F + GL + S+ + + Sbjct: 332 FNLGTEWRAMHDAGSGGTGSLLFGSGGLGPPAGTYNILPDVTTPATYSSGFTFGILGTGI 391 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 + G D G ++ A+ S+ IL+ P ++T+DN+ A +VG++VP + +TT+ + Sbjct: 392 TLG-GITFQDIGAMIQAIKSDTDIHILSKPQLLTMDNEEAQIHVGKNVPYATRKETTTTN 450 Query: 477 NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVL 536 +++ E + VG LK+TP +N V ++I QEVS V S T PT N R + V Sbjct: 451 LDYSSYEYRDVGVSLKITPHINSEGFVRMKINQEVSQVTEDS-PTGLPTTNKRAVNTTVT 509 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 +K ETVV+GG++ D ++ KVPLLGDIP++G LF+ S+ R K NL VFI P +IR Sbjct: 510 IKDSETVVIGGMIGDSTQLGTYKVPLLGDIPVLGWLFKSRSSNREKTNLYVFITPRVIRQ 569 Query: 597 DDVYRSLSKEKYTRYRQEQQQ 617 +SKEK +E++ Sbjct: 570 HTDASRISKEKSDHLEREKKN 590 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 11/250 (4%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 P + + +F+N +I+ F++ +G+ G+ LID VQG+++V S S E Y+ Sbjct: 65 PPVNNMGSPGVTIDFDNVEIQTFIKAIGEMTGRNFLIDKQVQGSVTVFSPKQISSDEAYR 124 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG-DELVTRIVPLENVP 136 F S+L+++GY+ + +K++ + + G D+L+TRIV L++ Sbjct: 125 VFQSVLEIHGYTTVPSG-AVIKILPRKDAREKDIPTFLQDEEGGREDQLITRIVKLKHGN 183 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV---IGTEKQQ 193 DL ++ ++ S+ + Y PS +L++T S + +L+++I +D Sbjct: 184 PEDLKKVIDPLVTRDSIVH--AYPPSGMLVITDVESNVQRLLKIITALDSELEKNAIVMH 241 Query: 194 IIHLEYASAEDLAEILNQLISESHG----KSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 + L+ ASAEDLA++L L + K Q + +I +DK TNSLII+ + Sbjct: 242 VYPLQNASAEDLAKVLINLQPKETAPGSEKGQPALSRNVQIQSDKATNSLIITASAEDYA 301 Query: 250 RITSLLKSLD 259 + L++ LD Sbjct: 302 LLQGLIQKLD 311 >UniRef50_B0BAC9 Type III secretion structural protein (Outer membrane ring) n=16 Tax=Chlamydiaceae RepID=B0BAC9_CHLTB Length = 921 Score = 343 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 138/639 (21%), Positives = 259/639 (40%), Gaps = 62/639 (9%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDP-SVQGTISVRSNDTFSQQEYYQFFLSILDL 85 Y NF + I + ++ V + G + D +Q +++ S+D S + L +L + Sbjct: 264 GYTVNFEDISILELLQFVSKISGTNFVFDSNDLQFNVTIVSHDPTSVDDLATILLQVLKM 323 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV-TRIVPLENVPARDLAPLL 144 + V+ N L + R+ + ++ D S + +V TR+ L +V ++ Sbjct: 324 HDLKVVEQGNNVL-IYRNPKLSKLSTVVTDGSAKDTCEAVVVTRVFRLYSVSPSAAVGII 382 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE-KQQIIHLEYASAE 203 + ++ ++ + E + +I++ A I K+ E+++ +D GT +++A+ Sbjct: 383 QPLLSHDAI--ISASESTRHIIVSDIAGNIEKVRELLQALDSPGTAIDMSEYDVQFANPA 440 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE- 262 L ++ + +I TN + + + + LL+SLD+ E Sbjct: 441 ALVSYCQDVLGAMAEEEAF------QIFIQPGTNKIFVISSPRLTAKTIQLLESLDIPEM 494 Query: 263 ---------------------SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 + +Y LKY + + + + L Sbjct: 495 AHTLDDVTSPAAALGSSGAANPKSLRFFMYKLKYQNGAAIAQAIQDIGYNLYVTTAMDED 554 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 ++ +I NS+V+ +Q+ +K+ +++ LD+ QV +E +I+E Sbjct: 555 FINTLN----SIQWLPVNNSIVVIGNQANVDKVVSLLNGLDLPPKQVYIEVLILETSLEK 610 Query: 362 GLNLGVQWANKN-------VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPA-----W 409 + GVQWA + +NTGL Q + G I+ P Sbjct: 611 SWDFGVQWAALGDEQGKVAYASGLLSNTGLTDPLRNQSLPVAPNPGNISLPTPGQLAGIS 670 Query: 410 DMFSAYNGMAAGFFNG----------DWGVLLTALASNNKNDILATPSIVTLDNKLASFN 459 DM + G G LL+AL + ++ P I+ D + ASF Sbjct: 671 DMMYGSSAFGLGIIGNVLSHNGKSYLTLGGLLSALDQDGDTTVVLNPRIMAQDTQQASFF 730 Query: 460 VGQDVPVLSGSQTTS-GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS 518 VGQ +P + S +V +E + +G L VT + + V L+IEQ +S + S+ Sbjct: 731 VGQTIPFQTTSTVIQETGSVTQNIEYEDIGVNLVVTSTIAPNNVVTLQIEQTISELH-SA 789 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 L P + + V G +V+ G + D + VS VPLL +PL+ LF + Sbjct: 790 QGVLTPVTDKTFAATRLQVPDGCFLVMSGHIRDKLTKIVSGVPLLSSLPLIKGLFSRSID 849 Query: 579 ERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 +R KRN+M+FI+P +I + +LS + RY E ++ Sbjct: 850 QRQKRNIMIFIKPKVISSFEEGTALSNTEGYRYNWESER 888 >UniRef50_D0X4T6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X4T6_VIBHA Length = 715 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 138/616 (22%), Positives = 261/616 (42%), Gaps = 53/616 (8%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQG---TISVRSNDT 69 A ++ + + F+ + GQ L ++ ++QG +++ + Sbjct: 120 AGQALSTNFSDEASLKLAADAMPLNDFLHYVFGQILQVDYILGDNLQGVTTPVTLNVQND 179 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL--VT 127 S + + +L G SV D ++ + + K+S + S+ V D V Sbjct: 180 ISPRRLFDLTQELLVQRGISVQARDGLYVIMNLKQDGKSSAVLGYGSTPDSVPDGAIDVV 239 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 ++VPL+ + ++R++ V VLIL+G+ S + + IE++K +D Sbjct: 240 QVVPLKFTFSNSTMGVIRELTS----VRVSPDLRQGVLILSGKRSEVVRAIELLKILDAP 295 Query: 188 GTEKQQI--IHLEYASAEDLAEILNQLISESHGKSQMP-ALLSAKIVADKRTNSLIISGP 244 + I + L Y + ED + +L+ + +V + +L + Sbjct: 296 SNTSKHIGLVKLRYITTEDFIATVTELLQNEGIVADGGVNDKRLSMVQIPQLGALAVFAS 355 Query: 245 EKA-RQRITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 E + +R+ +D + + +Y KYA+A ++ + L+ + + Sbjct: 356 EDSFIKRVRYWAAQMDRPSQGADLRYFIYQPKYARAADIGDSLSKLIGGRSLSVQKSADK 415 Query: 303 SSS-----------GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 SS + D +++ DE+ N+L+ + + + L +IA+LD+ QV++E Sbjct: 416 DSSKIEVNSQSSNSVSNDKLSLVVDERANTLIFRSSSTEYQALLPLIAQLDVMPKQVILE 475 Query: 352 AIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM 411 I EV + GV+WA N G +++ Sbjct: 476 MTIAEVTMTDEFKFGVEWAFSN--------------------------GNFSASTKDAFG 509 Query: 412 FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 G + +GD + L A SNN +I++ PS++ D A+ NVG D+PV+ + Sbjct: 510 LDKVGGGFIKWMSGDDFINLQAFESNNNVNIMSKPSLLVRDGVEANINVGTDIPVVGQTT 569 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS-VDSSSNSTLGPTFNTRT 530 T S + V +VE + G K+ VTP +N V + I QE S+ VD ++ P+ R+ Sbjct: 570 TDSNNGVTRSVEYRKTGVKVAVTPTINAQGIVSMVISQENSNQVDGGTSVEGNPSIFDRS 629 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 I V+ ++G+TV+LGGL+ + S VP LG +P+VG LF + + K L++ + Sbjct: 630 ITTEVVAESGQTVILGGLISENVTNNGSAVPFLGSLPVVGGLFGTKTDNKTKTELVIMVT 689 Query: 591 PTIIRDDDVYRSLSKE 606 P I+ + L Sbjct: 690 PRIVESSSQWDDLKAR 705 >UniRef50_B1ZUM2 Type II and III secretion system protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUM2_OPITP Length = 673 Score = 340 bits (873), Expect = 8e-92, Method: Composition-based stats. Identities = 146/636 (22%), Positives = 259/636 (40%), Gaps = 69/636 (10%) Query: 30 ANFNNADIRQFVEIVGQHLGKTILIDPSV-QGTISVRSNDTFSQQEYYQFFLSILDLYGY 88 +ADI + ++ + G++IL + T V + ++ E + L L Sbjct: 42 IKLPDADIDTVLGLLEIYTGRSILRPQQLPTATYRVVIDRKVTKSEAIMALETALSLNQI 101 Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRPG--VGDELVTRIVPLENVPARDLAPLLRQ 146 V L + FLKVV + VKT + + S G + T++ L+ + + P + Sbjct: 102 GVAPLGDKFLKVVALSQVKTEAPEMIEGSTLGLAPSGRVATKLFQLDFLRVNEFVPQITP 161 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ--QIIHLEYASAED 204 ++ G VV + +N ++T S + ++ +++++D + L + A D Sbjct: 162 LLTPGVANGVVPLDKANAALITDTVSNLQRIEMLLQQLDKPSMAGLTPKFYQLNFTKASD 221 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE 264 L L + G Q S AD RTN +I+ + L+ LDV Sbjct: 222 LVTKLRGMF---QGPLQNQLGSSISYNADDRTNQVILLSDPRQHPLFDELIAKLDVRAEP 278 Query: 265 EGNTRVYYLKYAKATNLVEVLTGV-------SEKLKDEKGNARKPSSSGAMDN------- 310 V YLK+A A ++ +L+ + ++K G+ R P N Sbjct: 279 NTRNEVIYLKHASAKDVAPLLSQLVSGQNTAAQKAAGTSGSVRAPVPQPNQPNQAATPDA 338 Query: 311 -----------------VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 + I DE++NS+V++ + ++ ++DI AQV +E I Sbjct: 339 AVALAGATVDTNEFSSYITILPDERSNSIVVSGTVDDIRLIRDLVEKVDILLAQVRIEVI 398 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 I EV + G+ N V Q ++ G I N A VA + + G+ + Sbjct: 399 IAEVTLDDSNKTGLSALNLTVATPQGSSQGTHITNFAGKVAGWDISQGVVNPLA------ 452 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 + L + + IL+ P+IVT NK A VG+ +P+++G TT Sbjct: 453 -------------FQAALGDAGTRSNVKILSAPTIVTTHNKEAQILVGESLPIITGIYTT 499 Query: 474 SGDNVFNT---------VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV--DSSSNSTL 522 + + T V K + LKVTP + + ++ L+I+Q+V V S N++ Sbjct: 500 AVGSTTPTEPGFAQNQQVTYKDIAIDLKVTPLIGDDGSIQLKIDQKVDDVVRTISINNSD 559 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 P R + + V G+ VVLGGL + +K+ L +IP++ LF + + Sbjct: 560 QPVIGRRQATSFINVSDGQIVVLGGLQRTANTRGRNKLGFLVEIPILSHLFGARTNSVRR 619 Query: 583 RNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQR 618 L++FIRP +I D + + +EQ + Sbjct: 620 TELLLFIRPHVIAPDAGTADATNTINSLSNKEQINQ 655 >UniRef50_C1A7C5 Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7C5_GEMAT Length = 621 Score = 340 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 135/619 (21%), Positives = 255/619 (41%), Gaps = 68/619 (10%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILID--PSVQGTISVRSNDTFSQQEYYQ 77 AG A+ +F NA + + + LG+T+++ P V+ ++ + S + + Sbjct: 60 AGRAQPGS-SLDFANARLADVIRTLATMLGRTVILSDIPDVR--LTFATPSAVSTSDLER 116 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD-ELVTRIVPLENVP 136 S+L+ +G +++ +V+ + + + + P LVT++VPL+++ Sbjct: 117 VLESVLEAHGLMLVSSG-TVAQVMPNDKAPMTGTLRSGFPFPDPPPLGLVTQLVPLQSIR 175 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI----GTEKQ 192 A + A LR ++ G+ +V SN L+L R + + + +++++ +D + Sbjct: 176 ADEGADALRAVLAKGARVEIVA--RSNALLLVDRGANMARYLDLLRTLDAAPNGESGLRT 233 Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT 252 +++L+YASAE++A ++ L + +L +++ R Sbjct: 234 YVVNLKYASAEEMAGVVGSLYGVQVANAGAGSL------------------SDRSLSRAL 275 Query: 253 SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 ++ D E T + + AR ++ + Sbjct: 276 DTFRARDQETFRTRQT---------------TSSSGAATPVTGATVARDSAAGLLVGRTT 320 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 + A+ TNSLVI L I LDIR AQVL E I E+ G G G+ WA Sbjct: 321 VVANTPTNSLVIRTAPPNFPMLRETIEALDIRPAQVLFEVTIAEIALGRGFEFGIDWAAV 380 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 N G G P + + LL Sbjct: 381 NRGGDVQAQFGNPEIPDTGSTSALLR--------------------VVRLDGTGVRALLR 420 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLK 492 +AS ++ +LATP I+ +N+ AS VG VP +S ++ + ++ V+ + VGTKL Sbjct: 421 TIASKSEVQVLATPEIMAANNREASILVGSKVPFISSTRLGNDISIDRAVQYQDVGTKLA 480 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSSNSTL--GPTFNTRTIQNAVLVKTGETVVLGGLLD 550 + P +N+ + +++ QEVSS+ + + P +TR +++ G+T V+ GL+ Sbjct: 481 IIPTINDEGYISVQLLQEVSSLTPQTVAAALSAPVISTREASTRAVLRDGQTAVIAGLIG 540 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 + Q +P+L DIP +G LF+ S+ R + L +F+ P ++R D + + R Sbjct: 541 ETRTTQDQGLPILKDIPWLGALFKRQSSTRQRTELAIFVTPYVVRSDADADGIRERIRKR 600 Query: 611 YRQEQQQRIDGKSKALVGS 629 +D Sbjct: 601 MEDRSPGSLDDTPLTRRPP 619 >UniRef50_A6DJN7 Secretion protein XqhA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJN7_9BACT Length = 738 Score = 340 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 147/640 (22%), Positives = 276/640 (43%), Gaps = 69/640 (10%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTI--SVRSNDTFSQQEYYQFFLS 81 E +N ++ + Q L L+DP V+G + S+ ++ + + ++ F Sbjct: 108 EKVSVFLTLDNVELGVVINEFSQVLSFQYLVDPGVKGFVKSSISLENSMTVYDAWKLFEQ 167 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP-LENVPARDL 140 +L + + G ++V + +S PG V + L+N+ A + Sbjct: 168 VLYINNAYASIDEAGIIRVFPLTKIAQDAL----ASVPGQAQGNVNIVYYSLQNITAAEA 223 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY- 199 P+L+ M A + +V+ SN L++ ++ +++L +++ +D G I Sbjct: 224 LPILKPFMSANASASVI--PSSNALLIVETSANMDRLNTILQTMDANGQSNWPQIAYRCR 281 Query: 200 --ASAEDLAEILNQL----ISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA-RQRIT 252 SA LAE+ + + S + G++Q + A I R ++ S P A + Sbjct: 282 FIDSAVLLAELQSAIPVLGFSLAAGENQGAGVKMASI---DRMQIIVASAPSGAVLNEVY 338 Query: 253 SLLKSLDVEESE-EGNTRVYYLKYAKATNLVEVLT---GVSEKLKDEKGNARKPSSSGA- 307 ++ LD ESE Y +++ + +LV L S + NA +SS A Sbjct: 339 KWIQILDTAESEGATKVFYYPVRHGISADLVAALQLFFPNSANAASPQTNASNSTSSRAS 398 Query: 308 --------------------------------MDNVAITADEQTNSLVITADQSVQEKLA 335 + V I D + N LVI + Sbjct: 399 TNNTNNRTTPNRTTTNRNTTNSSDVTSIKSLFEEPVTIFEDSRRNQLVIRTKPKTYSMVK 458 Query: 336 TVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVAD 395 ++ LD QV+++ VEV+ G GL G ++A + +G+ + ++ Sbjct: 459 AILRHLDAPAMQVMIQVTAVEVELGEGLEFGFEYAATDKFGSGDNESGVGVGSSTADTPS 518 Query: 396 YKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKL 455 + GG+ +P + G+ F + A+A ++ +++L TP I+TL+ + Sbjct: 519 FGPPGGL---DPGISLLLQSAGVDNEF------AFVQAVAGDSSSELLFTPHILTLNGEE 569 Query: 456 ASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD 515 A N+GQ+VPV +G+ +TS +N F +E ++ G L+V PQV+ V L+ E +SS+ Sbjct: 570 AEINIGQNVPVRAGTTSTSSNNDFEQIEYRSTGVLLRVLPQVSADKYVTLDTEIVISSIV 629 Query: 516 SSSNSTL---GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 S + P+FN + +L+K ET++LGG++ + E S VP L DIP +G L Sbjct: 630 EQSPEEVLIDSPSFNENKVTTKLLIKNNETILLGGIIQKVASESTSGVPFLKDIPGIGFL 689 Query: 573 FRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 F+ +T ++ L++FI+ T+I ++ + + Sbjct: 690 FQSATTGSREKELVIFIKATVIEQKSDFQDVVNRYGNAMK 729 >UniRef50_B5JLH7 Bacterial type II and III secretion system protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLH7_9BACT Length = 736 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 160/705 (22%), Positives = 283/705 (40%), Gaps = 105/705 (14%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGAN-------FNNADIRQFVEIVGQHLGKTILIDP 56 + + C L AAL + E N + +++ +EI+ + G++IL Sbjct: 1 MLAVACGLAAALPLQGQDTTERTAPDRNTVVESYKVVDQELQGVLEILSEMTGRSILRPQ 60 Query: 57 SV-QGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIAD 115 ++ I+ S + E S+L L V L FLKVV ++T + Sbjct: 61 ALPTPKITFDSGGPITIGELILALESLLSLNDIGVSPLGERFLKVVPLNEIRTEAPELVI 120 Query: 116 SSRPG--VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAST 173 SS ++V+++ L+++ ++ ++ + G +++ ++ SN +I+T S Sbjct: 121 SSLAERQSSGQVVSKLFRLQHLDSQTFQQQIQPFLSPG-FSSIIPFQNSNAVIVTDTISN 179 Query: 174 INKLIEVIKRVDVIGTEKQQ--IIHLEYASAEDLAEILNQLISESHGK------------ 219 + +L V+ VD + L++A A ++A+ + Q+I ++ + Sbjct: 180 LQRLEYVVGEVDKPSRLNIEPVFYTLQFAQASEVAQQIQQMIEDARNRFGDQNNSNTGRV 239 Query: 220 ------------------------SQMPALLSAKIVADKRTNSLIISGPEKARQRITSLL 255 SQ+ + I AD RTN +II + ++ Sbjct: 240 NNNSGNVPPPVPPGVGGELEGGSISQILFGSNTAISADDRTNQIIIMTAPTNLEFFEGII 299 Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLT------------------GVSEKLKDEKG 297 + LD++ V LK+A AT + +L+ G + G Sbjct: 300 QKLDIKADPSTRIEVIPLKHADATEVASLLSQFVSGKTKNDTNDRTNSPGNTNTRSGRSG 359 Query: 298 NARKPSSSGAMDN---------------------------VAITADEQTNSLVITADQSV 330 A P+ GA N + I ADE++NSLVI+ +S Sbjct: 360 GAGSPTFGGANQNDTPVRETLGAGAGSSVGEDRDSQFSTFMTILADERSNSLVISGTRSD 419 Query: 331 QEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAA 390 + + ++ ++DI QV +E II EV L + G F+ T + + Sbjct: 420 LDLMTVLVNKIDILLPQVRIEVIIAEVSLNENEGL-------SRGMDAFSMTYAEQDDGS 472 Query: 391 QGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG-DWGVLLTALASNNKNDILATPSIV 449 + + N G +G +L SN+ +L+ P++V Sbjct: 473 ANITIPGPGDDAPAINFLGLGLDGSFNYNDGVISGLTLNGILNTARSNSNVQLLSVPTLV 532 Query: 450 TLDNKLASFNVGQDVPVLSGSQTTSGDNVF-NTVERKTVGTKLKVTPQVNEGDAVLLEIE 508 T NK A+ V + P+++ SQT+S + F V+ + +G +L VTP + D + LEI+ Sbjct: 533 TTHNKEATIVVAEARPIVTSSQTSSISDTFRQNVQYEDIGIELTVTPLIGPNDVIQLEID 592 Query: 509 QEVSSVDS--SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 Q++ + + + P R + V V E VVLGGL + + SK+ LG+I Sbjct: 593 QKIDDISGKVTIDGNDQPIIGRRQATSYVSVANHELVVLGGLQRNRVTKGRSKMSFLGEI 652 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 PL+G LF S E K L+VFIRP +IR D + +K Sbjct: 653 PLLGGLFNRRSDESVKTELLVFIRPEVIRTTDDVNQDASKKIDEL 697 >UniRef50_B6QWW0 General (Type II) secretion pathway (GSP) D protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QWW0_9RHOB Length = 749 Score = 335 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 149/656 (22%), Positives = 277/656 (42%), Gaps = 94/656 (14%) Query: 18 PCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 A ++ NF + F++ +G L +ID ++GT++ ++ + ++ + Sbjct: 123 ASDAKATSDVVRLNFRGESLEYFIQQTLGGILQVNYVIDEPLEGTVTFQTENPIAKDQML 182 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 +L GY + +D + R ++ I S G +L RI+P+ + Sbjct: 183 SLVRVLLGRNGYILKLIDQ-IFHIGRPETIQA----IEQFSGVGSAGDLKLRILPVRSAS 237 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK--QQI 194 + D A +L+ ++ AG+ + V E SN + + R I E++ + +K + Sbjct: 238 SDDAAKVLQAILPAGA--SAVAVEGSNKIAIRARPEDIGAAEELVNSLYNRDNDKTIVSV 295 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII-SGPEKARQRITS 253 + L+ +SA +A+ + L + + L I+ + SL++ + QR+ Sbjct: 296 LRLQQSSASQVAKQITTLFQQLYPNQLTSPL---TIIPLETQQSLLVAVQSREMLQRVRR 352 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE----------KGNARKPS 303 + K +D + R+ LKY A + LT + E + +R Sbjct: 353 ITKEVDYNLLDTPKVRIITLKYLPANEIATQLTQILEGEGGSGVAAPPVEQRQQASRGNG 412 Query: 304 SSGAM------------------------------------------DNVAITADEQTNS 321 SS V I AD + N+ Sbjct: 413 SSARKFPVSANGESVGPAEDSISNRFSNANKLFDGLTDAPSNRVAVGSKVGIVADSRNNA 472 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 L++ + + + V+ LD+ +QV++EA I EV + L+ GVQW Sbjct: 473 LLVNSTYKEFKHIRDVVQALDLPLSQVVIEATIAEVNINDNLSYGVQWY----------- 521 Query: 382 TGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKND 441 +A GGI + + G A V+L AL + K Sbjct: 522 -----------LAKGNFAGGIGAVADGASRPTKAAGGALSLNTVGVDVVLKALQNITKVK 570 Query: 442 ILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVTPQVN 498 ++++P + LD + A +G VP S SQ++S D V N V+ K G L+V P + Sbjct: 571 VISSPYLTVLDGRKARLVIGDQVPFASRSQSSSNDGNVTVTNEVDVKDTGIVLQVEPNIR 630 Query: 499 EGDAVLLEIEQEVSSV--DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQ 556 ++VLL+I+QEVS+V + + +L PT TRTI + ++V++G T++LGGL+ + + Sbjct: 631 SNNSVLLQIQQEVSNVVQNKTEEGSLTPTIATRTINSDIVVESGRTILLGGLIQERKENG 690 Query: 557 VSKVPLLGDIPLVGQLFR-YTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 S VP+L IP+ G+LF+ T+ + + L+V I P ++R ++++++ Sbjct: 691 ESGVPILRKIPVFGELFKENTTNDTRRTELLVMITPRVVRKQSELQNITQKLRREL 746 >UniRef50_Q15QU6 Type II and III secretion system protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QU6_PSEA6 Length = 711 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 152/635 (23%), Positives = 264/635 (41%), Gaps = 61/635 (9%) Query: 29 GANFNNADIRQFV-EIVGQHLGKTILIDPSVQGT---ISVRSNDTFSQQEYYQFFLSILD 84 FNN I ++ EI G LG +I+PS++ +++R N Q+ Y+ L Sbjct: 107 RLTFNNMPIPVYINEIFGNQLGLNFVIEPSLKNAEDLVTMRLNQAVDQKNLYELATQTLK 166 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP--GVGDELVTRIVPLENVPARDLAP 142 YG + +N L +P +I+ + P + + PL++V + Sbjct: 167 SYGVTTSIKNNAILFSFSENAGNETPLLISGRTLPEVPSNSRPLFYVYPLQSVTTPMIRS 226 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ--QIIHLEYA 200 L QM + + N LI G I + + K +D + +II + Sbjct: 227 WLSQMFPKKEL-EIKEDIYQNALIFIGPNRAIEQAVAAAKLLDKPAMQDMFSRIIRPTLS 285 Query: 201 SAEDLAEIL-NQLISESHGKSQMPALLSAKIVADKRTNSLIISG-PEKARQRITSLLKSL 258 DLA L N L +E + Q + +++A N L++ E + K+L Sbjct: 286 DVNDLANNLENVLKAEGYAVRQSDGASAIRLLALSSVNQLVVFAKSENVLNHVIDWAKTL 345 Query: 259 DVEESE--EGNTRVYYLKYAKATNLVEVLTGV---------SEKLKDEKGNARKPSSSGA 307 + E+ + + Y ++ +AT++V++L + S+K N P +S Sbjct: 346 ETEQHKKVDKGLFSYPVQSTQATHIVDILNSLGVADYKSNNSDKSNTTNSNNSAPRTSNY 405 Query: 308 MDNV------AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 D + DEQ N+++ + ++ VI +LD A V+VE I+ EVQ + Sbjct: 406 PDALEEDVKGRYAVDEQLNTILYSGSGKDWLQILPVIKKLDKPAASVMVEVILAEVQLND 465 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 + GV+W + + GITS+ A Sbjct: 466 SEDTGVEWLANSSLGRF----------------------GITSSTIGGLGLGASGFNMTL 503 Query: 422 FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN---V 478 G +L N K +I + P ++ AS +VG ++PV++ + ++ D+ V Sbjct: 504 DSAGQTRAMLNLFYKNEKANIRSRPRLMVKSGGEASIDVGNEIPVITSNSQSTTDSDAVV 563 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLV 537 T+ + G L+V P V+ V +EI QE+S +S+S + PT R I V + Sbjct: 564 LQTISYRKTGVLLEVKPTVHASGFVDIEITQELSEATETSSSDIDSPTILNRKISTTVTL 623 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 + G +V+LGGL+ + VP+LG +P++G+LF S + + LM+ I P I+ Sbjct: 624 RDGGSVLLGGLISSTTSTGTQGVPILGRLPMIGKLFSTDSNAQDRTELMIMIIPYILNSP 683 Query: 598 DVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 D L+ E Q+ RID S +VG + Sbjct: 684 DEAEQLTDE-------LQKARIDKLSDGMVGKKRP 711 >UniRef50_Q89HG9 Blr6022 protein n=3 Tax=Bradyrhizobium RepID=Q89HG9_BRAJA Length = 793 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 154/680 (22%), Positives = 276/680 (40%), Gaps = 79/680 (11%) Query: 25 NEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 Y NF NA + +++ G L IDP VQGT+++ S + + + L Sbjct: 117 GSGYDLNFENAPVATVAKVILGDVLNVGYTIDPRVQGTVTLASVRPVPKADALYVLENAL 176 Query: 84 DLYGYSVIT-------------------------LDNGFLKVV----------------- 101 + G +++ G V Sbjct: 177 RMSGVALVRDRTGYRLLPAPEAGPGGIDRSLNAAAGQGITVVPLRYVSAQNIFKLLDAFG 236 Query: 102 -------RSANVKTSPGMIADSSRPGVGDELV-----------TRIVPLENVPARDLAPL 143 + T + S R D ++ I P+ N + Sbjct: 237 VKASTMRPDSARNTVIVSGSGSDRATAVDTILSFDADWMRGQSVGIFPVRNSSPEPVISE 296 Query: 144 LRQMMDAGSVG---NVVHYEP----SNVLILTGRASTINKLIEVIKRVDVIGTEKQQI-- 194 + ++MD+G G NV+ ++P +++L+++ + + + I R+D TE + Sbjct: 297 IEKIMDSGDGGISQNVIKFQPISRLNSILVVSQKPEYLKRAQTWIARLDRSDTEGVNLKS 356 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 L Y +++ + +LN+++ G S ++ ++ S SG A Sbjct: 357 YPLRYGNSKLIVALLNEMLLSQSGTSSSSLDNASSQISPGAGISTSSSGNPVAALSALPT 416 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 + + A + + G G K +G + NV IT Sbjct: 417 AGAGAATPVTAPAGSSLSARPAPS---MSATPGQDNTPGGISGGGAKAGPNGILQNVRIT 473 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 AD N++++ A+Q Q + I ++D + Q+ +EA I EV + LN GVQ+ + Sbjct: 474 ADVTNNAVLVYANQESQRIVEQTIRQIDRPQRQIAIEATIAEVTLNDQLNYGVQFFLASQ 533 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTAL 434 +A G + + +A A + V+L AL Sbjct: 534 KGSISNTISGVSNSATIGSNTEPASNAVNAAAGALLGRALPGFNFLIGAENSPRVVLDAL 593 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNTVERKTVGTKLK 492 +L+ PS+V LDN+ A+ VG VP +G+ T T+ + V NT++ K G L+ Sbjct: 594 HGITNVKVLSNPSLVVLDNQAATLQVGDQVPFSTGTATVLTANNTVVNTIDYKNTGIILR 653 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDF 552 V P+ N V+L+IEQE+SSV + S ++L PT + R +++++ V +G+TV+L GL+ + Sbjct: 654 VLPRANANGNVVLDIEQEISSVAAGSANSLTPTISQRRVKSSIAVTSGQTVLLAGLISET 713 Query: 553 SKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 Q +P+L IP +G F + +T RA+ L++FIRPT+I+D +++E R Sbjct: 714 ENRQRQGLPILDSIPGMGDAFSHQTTARARTELILFIRPTVIKDGVDAHVIAEE----MR 769 Query: 613 QEQQQRIDGKSKALVGSEDL 632 + R+ G S +V Sbjct: 770 TKMNGRLVGTSNPVVTVSPP 789 >UniRef50_B9XM19 Type II and III secretion system protein n=1 Tax=bacterium Ellin514 RepID=B9XM19_9BACT Length = 785 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 145/621 (23%), Positives = 273/621 (43%), Gaps = 31/621 (4%) Query: 29 GANFNNADIRQFVEIVGQHLGKTILIDPSVQGT-ISVRSNDTFSQQEYYQFFLSILDLYG 87 NF D+ Q + I G+ + +T+L ++ I++++ ++ E + S+L L G Sbjct: 178 EINFPAVDVNQVLTIYGELVNRTVLRPTALPAQLITLKTQTPLTKSEAIEALNSVLALNG 237 Query: 88 YSVITLDNGFLKVVRSANVKTSPG--MIADSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 ++I + + F+K + D S+ V++IV L+ + ++ P L Sbjct: 238 ITMINVGDKFVKALPQNQALQDSPEFSTGDPSQLPETGLFVSKIVQLKYLKPSEMMPALT 297 Query: 146 QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV--IGTEKQQIIHLEYASAE 203 A G + E + + + + + +++EVI ++DV + +I ++YA A Sbjct: 298 PF--AKMPGGIFPVENNQTIFIRDYSENVKRMLEVIAKLDVEVPMDYETAVIPIKYALAA 355 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES 263 D++ L+ L S G + + + + + S S Sbjct: 356 DISSALSSLGSGGGGGGTSIGRSGRTGSNLAGSGA---APGGYSTGTLGGTPGSNPFGTS 412 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV 323 T A+ N T +++L+ A + N I ADE+TNSL+ Sbjct: 413 PGMGTSQSPFGGAQGGN---RTTSFTDRLQQIVKRASSSGEFQILGNNKIIADERTNSLL 469 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG 383 + A + + + ++ +LD+ AQVL+EAII+EV + +LGV + + + Sbjct: 470 VFASKQDMDVIKDIVGKLDVVLAQVLIEAIIMEVTLDDTRDLGVSYLQTSPSGNNYFQGI 529 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 I N + +AN FS FN D+ +TA A++N+ ++L Sbjct: 530 GAIKNGPFASFSNFASTATNAANSLPSGFS-----YLAQFNNDFSATITAAATDNRINVL 584 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT-VERKTVGTKLKVTPQVNEGDA 502 + P I T A+ +G VP ++G+ + ++ ++ VG L+VTP +N Sbjct: 585 SRPRIQTSHAVTANLQIGDTVPYVTGTYFGGLNGQASSQYQQTFVGINLQVTPLINPDGL 644 Query: 503 VLLEIEQEVSSVDSSS--NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 V+++I Q+V + + + ++ PT RT Q V VK +T++LGG + S V Sbjct: 645 VVMDITQDVQQLGTPTIIDNNPVPTTTKRTAQAKVSVKDRDTIILGGFISSTKSRSKSGV 704 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR---------- 610 PLL +IP++G LFR TS + L+V IRPT++ + ++ + R Sbjct: 705 PLLMNIPVLGYLFRSTSDSNKRTELIVLIRPTVLPTPEAAALVATRERDRLPGVKAAEAD 764 Query: 611 YRQEQQQRIDGKSKALVGSED 631 +R+E+ +R+ K V ++ Sbjct: 765 FRKEEAKRLKQAEKIQVPRDE 785 >UniRef50_Q3JD22 General secretion pathway protein D n=2 Tax=Nitrosococcus oceani RepID=Q3JD22_NITOC Length = 833 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 158/726 (21%), Positives = 274/726 (37%), Gaps = 150/726 (20%) Query: 18 PCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 P NF N DIR+ V+ I+G L + +ID +VQGT++V++ + Sbjct: 94 PRTFQVREGAILLNFENTDIREVVKTILGDILEENYVIDRAVQGTVTVQTGRPLPKDALM 153 Query: 77 QFFLSILDL-------------------------------------YGYSVITLD----- 94 ++L L Y ++ LD Sbjct: 154 PTLETLLRLNNAALIQAEGLNKIVPLNQAVQGNLSPRLSRAKSTVGYDVRIMPLDYIGAG 213 Query: 95 ------------NGFLKVVRSANVKTSPGMIADSSRPGVG---------DELVTRIVPLE 133 +G ++V + N+ G + + + + + LE Sbjct: 214 EMEKILEPFVPKDGLVRVDPARNLLILAGTAKELDQWQETIDIFDVNWLEGMSVGLYRLE 273 Query: 134 NVPARDLAPLLRQMMDAGSVGNV------VHYEPSN-VLILTGRASTINKLIEVIKRVDV 186 A L L +M + + + E N +L++T ++ + + I+R+D Sbjct: 274 YTDAELLVNELNIVMGPEATTPLAGMFRFIPIERLNGILVVTSQSQYLKEAKTWIERLDQ 333 Query: 187 IGTEKQQ---IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 + + + +++ A+ LA +L G A ++ A +S Sbjct: 334 GEDTESERLYVYPVQHGRADHLAALLQSAFGLEGGGGISSARVAPGQQAVGLFSSSRGGS 393 Query: 244 PEKARQRITSLLKSLDVEESEE--------------------GNTRVYYLKYAKATNLVE 283 R G R + A + + Sbjct: 394 GGFGSSRGGGFGGGGFGSSRGGGGFGGGTLGSSRGGVGSSQMGGLRGFKASRGAAPDASQ 453 Query: 284 VLTGVSEKLKDEKGNARKPSSSGAMDN-----------------VAITADEQTNSLVITA 326 + + E +S A V + D + N+L+I+A Sbjct: 454 EEELRAFQASTENATESPQASGSAAGGIKFTLPGAKDDEDKKPEVRVIPDVENNTLLISA 513 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPI 386 V EK+ + +LDI QVLVEA I EV + L GV+W +N Sbjct: 514 PPPVYEKILVALHQLDIPPRQVLVEATIAEVTLTDDLQYGVRWFFEN------------- 560 Query: 387 FNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATP 446 GV DY G +T+A P F+ AAG ++L L+S K +L++P Sbjct: 561 ----TGVKDYLGRGALTAAIPGTSTFTYGLFDAAGAAR----IVLDTLSSQTKVKVLSSP 612 Query: 447 SIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLE 506 ++ LDN+ A VG +P+ +GS G N ++ + G L VTP+VN G V +E Sbjct: 613 QLLVLDNQTAEIRVGDQIPIQTGSTIGIGGNSTTRIQFRDTGVLLTVTPRVNAGGRVTME 672 Query: 507 IEQEVSSV----------------DSSSNSTLG--PTFNTRTIQNAVLVKTGETVVLGGL 548 + QEV+ V D ++N T+G PTF R+ ++ V V++G+T+VLGGL Sbjct: 673 LTQEVTDVGGTKLPTSAAPSGDGDDDNNNQTVGNNPTFLQRSFRSVVTVQSGDTIVLGGL 732 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKY 608 + D + S +P L +PL+G LF T+ +++ L+V + P ++R+ R +++E Sbjct: 733 IRDNERFSDSGLPFLHKLPLIGPLFGATAKSKSRTELIVLMTPRVVRNQYEARLVTEEFR 792 Query: 609 TRYRQE 614 + R Sbjct: 793 EKLRNA 798 >UniRef50_Q0BZ85 Type II secretion system protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZ85_HYPNA Length = 694 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 146/645 (22%), Positives = 282/645 (43%), Gaps = 77/645 (11%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQ 59 M G ++ A + A ++ F NA I + E++G+ G + IDPSV Sbjct: 72 MYGSSRFFDDAQTADTLVPADDSQTRGESFVFRNAPIDAVLNEVLGERFGLSYSIDPSVT 131 Query: 60 GTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFL--KVVRSANVKTSPGMIADSS 117 G+I++R + + + + L L G+ ++ F+ +V + + P + + Sbjct: 132 GSITLRLDGILTPDQAVAGMDAALRLQGFEIVESGGNFVIARVGQFQGSVSKPVFLQPND 191 Query: 118 RPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKL 177 G L ++ + ++ + + M+ + + ++L+G ++ Sbjct: 192 VLPPGTSLA--VLQIRYASVSEVTAIAKSMLAEDLIRY--GDDARGFVVLSGDPEQVSAG 247 Query: 178 IEVIKRVDVIG--TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKR 235 ++++K +DV + +I + AS E++A L ++S G S +V +R Sbjct: 248 VQLLKSLDVNWLSSVSTALIPVVNASPEEIASDLEPILSRLGGVS---------VVPLER 298 Query: 236 TNSL-IISGPEKARQRITSLLKSLDVEESEEG--NTRVYYLKYAKATNLVEVLTGVSEKL 292 +L +IS ++ + + LD + + VY +Y A +LV + G S Sbjct: 299 LQTLMVISRQRESLDQAREWIARLDKGARPQLMRDVLVYEARYVNAEDLVALTEGGSASS 358 Query: 293 KDEK---------------------------GNARKPSSSGAMDNVAITADEQTNSLVIT 325 G+ + ++++I D N++V Sbjct: 359 SGFTTSAFNEPRKTSGRREVTDRPSETAALPGDTFSEPGTSLFESLSIRVDPGRNAVVAR 418 Query: 326 ADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN-KNVGAQQFTNTGL 384 E L+ +++ LD + QVL+EA IVEV +G +LGVQW ++ + FT+TG Sbjct: 419 GASVELESLSELLSLLDKPKRQVLIEATIVEVSLTDGTSLGVQWDLVQDRLSATFTDTG- 477 Query: 385 PIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILA 444 + D+ S + G++ + N D ++ ALA+ + +I++ Sbjct: 478 -----------------------SGDLTSLFPGVSVSYINTDIAAVINALAATSDVEIVS 514 Query: 445 TPSIVTLDNKLASFNVGQDVPVLSGSQTTS---GDNVFNTVERKTVGTKLKVTPQVNEGD 501 +P ++ L+N+ A VG VP+++ S + G V N+ + G L VTP++ G Sbjct: 515 SPRMLVLNNETARLQVGDQVPIITQSAVSVSDPGAPVVNSTTYRDTGVILTVTPRIRAGG 574 Query: 502 AVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 V ++I QEVS V ++ S++ PT + R+IQ+ + V G T VLGGL+ + + Sbjct: 575 MVEVDISQEVSGVSETTTSSIDSPTISQRSIQSVLAVPDGSTAVLGGLMSSTRSYSRTGI 634 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 P+L D P++G FR T+ + L+V I PT++ ++ + Sbjct: 635 PILKDTPVLGAAFRSTNQSERRTELIVLIEPTVVVSEEPSSDIPA 679 >UniRef50_Q04SX5 Type II secretory pathway component, protein D n=7 Tax=Leptospira RepID=Q04SX5_LEPBJ Length = 598 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 137/620 (22%), Positives = 274/620 (44%), Gaps = 102/620 (16%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT-ISVRSNDTFSQQEYYQFFLSILDL 85 + AN+ + ++ F++ + L K IL+D S++G I++ S + + F S+L+ Sbjct: 53 SFYANWRDTELNDFLKGMSAILKKNILLDESLKGKKITIISQKEIPIKNAFIFMKSVLES 112 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD-LAPLL 144 G+ V+ + + IV +++ AR + + Sbjct: 113 LGFGVVEEPD------------------------------LISIVKIKDALARSPVVRVG 142 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 ++++ VG+ QII +E E+ Sbjct: 143 KELIPETEVGDYRTI--------------------------------TQIIPIENTKPEE 170 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE 264 L IL +L S + ++ + TN++++SG ++ L+ LD++ E Sbjct: 171 LEPILKRLTSP-----------NTDVIVYRNTNTIVLSGSGADINKLLVLINELDLKLEE 219 Query: 265 E--------GNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM----DNVA 312 G+ +Y L++++A + L + + + + + G + + + Sbjct: 220 ASPGAIASAGDVHIYTLEHSEAEKIAATLVKLDNPVVQSEELSPEKKVPGQIPMKVEKIK 279 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 +++NS+++TA + ++ +I LD R QVL+E +IVE+ + + G+ W K Sbjct: 280 AVGHKESNSVIVTATNAEWAEIRKIIKVLDSARKQVLLEVLIVELTSSDLNDFGIDWRYK 339 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 QF + N NP + S ++ + +L+ Sbjct: 340 GEAFGQFNSGLSKEANIINSNGQ---------INPNVNTLSGFSLGFLKAGSEQIIGILS 390 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV----FNTVERKTVG 488 A N ++L+ P ++T+DN+ A +VGQDVPV + S+ + E + G Sbjct: 391 ANQGNENFNVLSAPQVLTVDNQEAEISVGQDVPVRTQSRNAGTGGTNAVTVDNYEYRPTG 450 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGL 548 KLK TP VN+ + + LE+ QE+ ++ + + PTFN R I+ ++ ++ +++V+GGL Sbjct: 451 IKLKFTPHVNKNNRITLELFQEIKNIAEIALAGGNPTFNRREIKTSISIENTQSIVIGGL 510 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII--RDDDVYRSLSKE 606 + + ++++ K+P LGDIP +G LF+ T+ + K NLMVFI P I+ R++ ++ K+ Sbjct: 511 ISNDKQKRIIKIPFLGDIPYLGHLFKRTTEKIKKTNLMVFITPHILDSRENADKMTVKKK 570 Query: 607 KYTRYRQEQQQRIDGKSKAL 626 + +++RI K K + Sbjct: 571 MLQEQYELERERILNKEKEI 590 >UniRef50_D0HB85 S-protein secretion component D n=1 Tax=Vibrio mimicus VM223 RepID=D0HB85_VIBMI Length = 713 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 127/634 (20%), Positives = 253/634 (39%), Gaps = 85/634 (13%) Query: 24 ENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSV---QGTISVRSNDTFSQQEYYQFF 79 ++ + + ++ F+ +G+ L ++D + + I++R N+ + + Sbjct: 99 SDQLVSLSADGLELNHFINLALGEVLKLNYVVDSDLAKNKTPITLRINEPVTSERMLGLV 158 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTS-PGMIADSSRPGVGDELVTRIVPLENVPAR 138 +L + ++ ++ +KV+ ++ ++ P +I S P + V IVP+ + Sbjct: 159 EEVLMVNKVAL-AVEGDLVKVIPASKTDSAVPTLIDSSIAPILRYGKVVEIVPIYYLSII 217 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG--TEKQQIIH 196 + + L+ + G V+ N L++ I+++ +++ +DV ++ ++ Sbjct: 218 EASSLVSDFLLDQGGGKVLRQIHLNALMIIANKEDIDRVYALLREIDVPNRVSQNITLVA 277 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRITSLL 255 +Y S E L L +S + M + ++ N+L+++ K + Sbjct: 278 PKYVSLETLMADLQLSLSAASVPVSMNTGKNGVVLIPLSNNTLMVTSSTKGWMNYTLEWI 337 Query: 256 KSLDVEESEEGN--TRVYYLKYAKATNLVEVLTGVSEKL--------------------- 292 K LD + EGN YY++ KA + V++ + + Sbjct: 338 KQLDQPKKIEGNQGIYAYYMQNTKAEDAWGVVSAIFSEQMGANKEEKSKGTDLVAAAQQA 397 Query: 293 ---KDEKGNARKPSSSGA---------------MDNVAITADEQTNSLVITADQSVQEKL 334 + P ++G +N + D + NS+ T + + ++L Sbjct: 398 IQEQQSTDTGNTPGNTGILRSNKSKSNKDMQVVTENYRVVVDSKRNSIFFTGEYADYQRL 457 Query: 335 ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVA 394 ++ +D R QVL++A I E+ + GV F+ G Sbjct: 458 VELLRFVDKRPQQVLIQATIAEINIDDAQQFGVD------------------FDITSGTI 499 Query: 395 DYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNK 454 G N + + + GF A K +L++P I+ ++ + Sbjct: 500 TGGTKGLAGFDNGVLSLTGVFGDVTMGF---------RAALKTGKAQVLSSPRIIAMNQE 550 Query: 455 LASFNVGQDVPVLSGSQTTSGDN--VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 A VG + V++G + GD+ T + G L + P +N+ V LEI QEVS Sbjct: 551 AARITVGDQIQVVTGEVSGGGDDSKATTTYKYVDTGVTLDIIPTINQNGLVELEISQEVS 610 Query: 513 SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 N G N R++Q +L +G+TV +GGL+ E ++VPLLGDIP +G L Sbjct: 611 ------NKGTGTDINKRSLQTKLLADSGDTVFMGGLIKQDIGETDNRVPLLGDIPYLGNL 664 Query: 573 FRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKE 606 F+Y S + L++ I P +I + + E Sbjct: 665 FKYKSQTQKSVELVLLITPYVINSREDAIFYTNE 698 >UniRef50_Q212Y1 Type II and III secretion system protein n=5 Tax=Bradyrhizobiaceae RepID=Q212Y1_RHOPB Length = 774 Score = 325 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 153/673 (22%), Positives = 272/673 (40%), Gaps = 93/673 (13%) Query: 25 NEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + + NF N + ++V G LG +IDP VQG IS+ S + + + L Sbjct: 93 GDGFELNFENTPVASVAKVVLGDILGIGYVIDPRVQGNISLSSGRPVPKSDILFALENAL 152 Query: 84 DL-----------------------------------YGYSVITLDN----GFLKVV--- 101 + YG SV+ L + +K+V Sbjct: 153 RIGGVALVRDNAAYRLMPQADAVGVGSADAAERTEAGYGISVVPLQHVSAQTVVKLVDSF 212 Query: 102 -------RSANVKTSPGMIADSSRPGVGDELV------------TRIVPLENVPARDLAP 142 R+ + + S +LV I P++N + Sbjct: 213 GTKPGMVRADTGRNLILLQGTGSERRNAVDLVLGFDADWMRGQSVGIFPVQNSNPEPIIA 272 Query: 143 LLRQMMDAGSVGNVVHYEP-------SNVLILTGRASTINKLIEVIKRVDVI--GTEKQQ 193 L +++D+G G + VL +T ++ + ++ I+R+D G Sbjct: 273 ELEKIVDSGEGGVTQSMIKFQAISRMNAVLAVTRKSELLRRVETWIQRLDTTNTGRSAIH 332 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 + ++Y A +A +LN++ AL SA + S A R+++ Sbjct: 333 VYRVKYGEARQIARVLNEIFGGGGATGSSSALDSAAGQIAPGSGLAASSSSSSALNRLSA 392 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLV---EVLTGVSEKLKDEKGNARKPSSSGAMDN 310 S + + A AT + S + + SS +D Sbjct: 393 GQSSSGFATGAKTASSGAATTNAPATPSGAQGSLFDARSGGSPGGRSGTAESSSGNILDG 452 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 + ITAD N+L+I A Q + + ++D + QV ++A I EV + L GVQ Sbjct: 453 IRITADTVNNALLIYASQEQYSIVERTVRQVDQPQLQVAIDATIAEVTLTDDLQFGVQTY 512 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + + G ++ + + + A P ++ + Sbjct: 513 LTSRDFGMPADRGSLGTASSSALISAASDVVLNRAIPGFNFLVGSG--------SSPKAI 564 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNTVERKTVG 488 L AL + + +L+ PS+V +DN++A+ VG ++P+ +GS T +S + + NT + + G Sbjct: 565 LNALHAITEVKVLSNPSLVVIDNQVATLQVGDEIPIQTGSATVLSSSNTIANTTDYRRTG 624 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSV---------DSSSNSTLGPTFNTRTIQNAVLVKT 539 L+V P++N V LEIEQE+S+ S+S ++L PT +TR ++++V V + Sbjct: 625 ILLQVVPRINANGNVRLEIEQEISNPVASSSTSSSSSTSTNSLTPTVSTRKVKSSVAVAS 684 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 G+TV+L GL+ D + S +P L +P VG +F T + L++FIRP IIRD Sbjct: 685 GQTVLLAGLISDTQNKTRSGIPGLDQLPGVGDVFSQTEKIMKRTELIIFIRPQIIRDGSD 744 Query: 600 YRSLSKEKYTRYR 612 +++E T+ R Sbjct: 745 AHFVAEELRTKLR 757 >UniRef50_P29041 General secretion pathway protein D n=22 Tax=Xanthomonadaceae RepID=GSPD_XANCP Length = 759 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 145/695 (20%), Positives = 271/695 (38%), Gaps = 106/695 (15%) Query: 12 LAALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTF 70 AA P G A + NF ++ V+ I+G LG+ +I P VQGT+++ + + Sbjct: 78 AAAAPSPTLGMASSGSATFNFEGESVQAVVKAILGDMLGQNYVIAPGVQGTVTLATPNPV 137 Query: 71 SQQEYYQFFLSILDLYG---------YSVITLDNGF------------------LKVVRS 103 S + +L Y+++ D ++VV Sbjct: 138 SPAQALNLLEMVLGWNNARMVFSGGRYNIVPADQALAGTVAPSTASPSAARGFEVRVVPL 197 Query: 104 A--NVKTSPGMIADSSRPGVG----------------------------------DELVT 127 + ++ +RP + Sbjct: 198 KYISASEMKKVLEPYARPNAIVGTDASRNVITLGGTRAELENYLRTVQIFDVDWLSGMSV 257 Query: 128 RIVPLENVPARDLAPLLRQMM------DAGSVGNVVHYEPSN-VLILTGRASTINKLIEV 180 + P+++ A ++ L ++ + + + E +N VL++T + ++++ + Sbjct: 258 GVFPIQSGKAEKISADLEKVFGEQSKTPSAGMFRFMPLENANAVLVITPQPRYLDQIQQW 317 Query: 181 IKRVDVIGTE-KQQIIHLEYASAEDLAEILNQLISESHGKSQM-PALLSAKIVADKRTNS 238 + R+D G + L+Y A+DLA+ L+++ P+L+ +V NS Sbjct: 318 LDRIDSAGGGVRLFSYELKYIKAKDLADRLSEVFGGRGNGGNSGPSLVPGGVVNMLGNNS 377 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 R SL S + G T + + + +L Sbjct: 378 -------GGADRDESLGSSSGATGGDIGGTSNGSSQSGTSGSFGGSSGSGMLQLPPSTNQ 430 Query: 299 ARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 + D V ++A +TN+L++ + + VI +LD+ QV +EA I EV Sbjct: 431 NGSVTLEVEGDKVGVSAVAETNTLLVRTSAQAWKSIRDVIEKLDVMPMQVHIEAQIAEVT 490 Query: 359 DGNGLNLGVQWANKN--VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 L GV W +N +G P +A G + G ++N Sbjct: 491 LTGRLQYGVNWYFENAVTTPSNADGSGGPNLPSAAGRGIWGDVSGSVTSN---------- 540 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS-- 474 G+A F + +++AL +L TPS+ +N A+ NVG +P+ S S T Sbjct: 541 GVAWTFLGKNAAAIISALDQVTNLRLLQTPSVFVRNNAEATLNVGSRIPINSTSINTGLG 600 Query: 475 GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL------------ 522 D+ F++V+ G LKV P+V + V L+I QEVS+ + + Sbjct: 601 SDSSFSSVQYIDTGVILKVRPRVTKDGMVFLDIVQEVSTPGARPAACTAAATTTVNSAAC 660 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 NTR ++ V+ G+T++L GL+DD + + + +P L +P+VG LF + + Sbjct: 661 NVDINTRRVKTEAAVQNGDTIMLAGLIDDSTTDGSNGIPFLSKLPVVGALFGRKTQNSDR 720 Query: 583 RNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 R ++V I P+I+R+ R L+ E ++++ + Sbjct: 721 REVIVLITPSIVRNPQDARDLTDEYGSKFKSMRPM 755 >UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Burkholderia RepID=B2T7P2_BURPP Length = 791 Score = 320 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 180/736 (24%), Positives = 277/736 (37%), Gaps = 106/736 (14%) Query: 3 GLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILI-------- 54 L ++ LL A L+ Q NF NADI Q + +G GKTI++ Sbjct: 7 ALRRVATALLVAGLIT--AQTAQAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQL 64 Query: 55 -----------------------------------------DPSVQGTISVRSNDTFSQQ 73 D +QG + N ++ Sbjct: 65 NLVSENAVPEDQALKTLQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNTPVARG 124 Query: 74 E----------------YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSS 117 + ++ N + V A+ I Sbjct: 125 DQVVTQVFVLKNESANNLLPVLRPLISPNNTVAAYPANNTIVVTDYADNVRRIAQIIQGV 184 Query: 118 RPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGN--------VVHYEPSNVLILTG 169 G + +V L+N A D+A L +M+D GS+G+ V +N L++ Sbjct: 185 DSAAGQSV--SVVQLKNANAIDIATQLNKMLDPGSIGSTDATLKVSVTADPRTNSLLIRA 242 Query: 170 R-ASTINKLIEVIKRVDVIGTE--KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALL 226 + + + K +D T ++ L A A LA+ L + + Sbjct: 243 SNGARLAAARTLAKELDTPTTMPGNIHVVPLRNADATKLAKTLRGMFGKGGDSGSSSNSN 302 Query: 227 SAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT 286 A + S G L + Sbjct: 303 DANSFNQ----------NNSGGIGGNNSTGSSGTPPLPSGGLGSSSL-ASPMGGSGSGGG 351 Query: 287 GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 + + K S I AD TNSL+ITA + V L VI +LD RRA Sbjct: 352 YGAGGSNNGGFGNDKEKSDDNQQGGMIQADSATNSLIITAAEPVYRNLRAVIDQLDARRA 411 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QV +EA+IVE+ NLG+QW N TN N+ + G T Sbjct: 412 QVYLEALIVELNSNTSGNLGIQWQVANNSIFAGTNLQTGSSNSIVNLTAAAVAAGSTGGL 471 Query: 407 PAWDMFSAYN-GMAAGFFNGDWGV-----LLTALASNNKNDILATPSIVTLDNKLASFNV 460 G+ G+ + +GV LL AL+ ++L+TP+++TLDN+ A V Sbjct: 472 AGALGNGTLQQGLNIGWIHNIFGVQGLGALLQALSQTADANVLSTPNLITLDNEEAKIVV 531 Query: 461 GQDVPVLSGS----QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS 516 G +VP+ +GS + + + FNT +R VG L V PQ+ +G + L++ E S++ + Sbjct: 532 GTNVPIQTGSYSNLTSATATSAFNTYDRVDVGLTLHVKPQITDGGILKLQLYTEDSAIVT 591 Query: 517 SSNSTL----GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 +N+ GP F R+IQ+ VL GE +VLGGL+ D + SKVPLLGDIP +GQL Sbjct: 592 GTNNAATNPAGPEFTKRSIQSTVLADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQL 651 Query: 573 FRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 FR R K NLMVF+RP II D ++++ +Y + Q + + ++D Sbjct: 652 FRSEQKTRNKTNLMVFLRPVIISDRGTAQAVTSNRYDYIQGVQGAYK-QDNNLMKDNDDP 710 Query: 633 PVLDENTFNSHAPAPS 648 V S +P+ Sbjct: 711 VVPPMPIGPSQGGSPA 726 >UniRef50_B2IBK3 General secretion pathway protein D n=2 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IBK3_BEII9 Length = 803 Score = 317 bits (812), Expect = 9e-85, Method: Composition-based stats. Identities = 149/675 (22%), Positives = 267/675 (39%), Gaps = 101/675 (14%) Query: 24 ENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 Y NF NA+ ++ V G L +IDP V G IS+ S+ ++ + S Sbjct: 144 SAGDYQLNFENAEATAVIKTVLGDVLQVNYVIDPRVNGQISLTSSRPVPRKSLIRLLESA 203 Query: 83 LDLYGYSVITLDNGFLKVVRSANV----------------------KTSPGMIADSSRPG 120 L +VI NG +VV + + K P +A G Sbjct: 204 LSGIN-AVILKQNGLYRVVPAGDATTIQNVHYHEAGEGFGVTVIGMKNVPVALAGRVLEG 262 Query: 121 VGDE------------------------------------LVTR---IVPLENVPARDLA 141 +G L TR I+PL N + Sbjct: 263 LGSRGGSVRMEADSNLLIFQGTASERQAALDAASMVDVDWLKTRSVAILPLTNSAPDTVI 322 Query: 142 PLLRQMMDAGSVG---NVVHYEPSN----VLILTGRASTINKLIEVIKRVDVI--GTEKQ 192 + +++ G G ++V +P N VL ++ + I+K+ + ++D Sbjct: 323 AEVHRILGTGEGGLSKDIVQMQPINRLNAVLAVSRNHAAIDKVTRWVSKLDKADYAALGV 382 Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT 252 + L+YA+A+++A +LNQ+ S G++ + D ++S+ + Sbjct: 383 NVYKLQYANAKNVAAMLNQIYGGSGGQTGQDQDKNVLQPGDSSSSSMQAGFSKSGSGSSQ 442 Query: 253 SLLKSLDVEESEEGNTRVY-----YLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 + T L+ + A + + + SS Sbjct: 443 EPSSQSSNQSGSGRVTAGSLFANAGLRSSSANSNPYGSLSPATAAQTSGTRTDNTSSQAP 502 Query: 308 MDN----VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGL 363 D + IT D TNSL+I A++ + I +D QV +E + EV + L Sbjct: 503 DDRQSKVIRITPDISTNSLLIHANRLDYRLIERTIHAMDRPPVQVEIEVTVAEVTLTDAL 562 Query: 364 NLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 N GVQ N++ G + GI++A+ + G Sbjct: 563 NYGVQ----------------AYLNSSAGSLQMLGSAGISNASIPLVTPHPAVNLMIGQI 606 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT---TSGDNVFN 480 + V++ AL++ +L+TPS+V LD + A VG VP+LS T T+ + N Sbjct: 607 -ANPRVVINALSNITDVKVLSTPSLVVLDRQPAVLQVGNQVPILSQQATSTQTANPAIVN 665 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTG 540 +V K G L V P+VN V L+IEQ++S+V + + L PT + R +++ + + G Sbjct: 666 SVNYKDTGIILNVLPRVNANGVVALDIEQQISAVTNPDPTNLTPTISQRRVRSTIAIPNG 725 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 +TV+L GL+ + + S +P++ I + L ++ ++ L++FI+P I+R+ Sbjct: 726 QTVLLAGLIQETTNGTRSGLPIISKIRFLNDLVTNHNSSDSRTELIMFIKPQILRNGFDS 785 Query: 601 RSLSKEKYTRYRQEQ 615 + +S+E R + + Sbjct: 786 QQVSEEFRERLQMMR 800 >UniRef50_D1N173 Type II and III secretion system protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N173_9BACT Length = 794 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 141/677 (20%), Positives = 271/677 (40%), Gaps = 88/677 (12%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 FN++ + + LG D ++ T+++ N +++E ++ F L L Sbjct: 130 DVVLVFNSSPLVDTLPAFADILGFNFTADSDLKSTVTLNLNSRMTRRELWEAFDQTLQLA 189 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 G I L+++ +A + + + +R G E+++ L NV A+D L+ Sbjct: 190 GAGAIRNGQ-LLEIMPAAKLPGRSALR-NRNRLTSGAEVIS--YSLFNVTAKDAVAQLKP 245 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ--QIIHLEYASAED 204 + V V SNV++L R I KL EV++ +D G + ++H Sbjct: 246 FLSPAGVA--VEATRSNVIVLCDRLENIPKLKEVLELLDQPGRQNWPRAVVHCRNVKPSA 303 Query: 205 LAEILNQLISESH-----GKSQMPALLSAKIVADKRTNSLIISG-PEKARQRITSLLKSL 258 +A+ L++++ + + ++ R L ++ E+A + + + + L Sbjct: 304 IAQELSEVLPVLGFPVVLATDKTEVPGAVQLTGVDRIQILAVTAATEEAIKEVRNWISIL 363 Query: 259 DVEESEEG-NTRVYYLKYAKATNLVEVLT--------------------GVSEKLKDEKG 297 D +S VY + + KA L + L+ SE+ + + Sbjct: 364 DNADSSTQERMYVYKVTHDKAEYLAQALSVIFSTQGTSLTVDTSFNRSNSTSEQTRTSQI 423 Query: 298 NARKP-------------------------SSSGAMDNVAITADEQTNSLVITADQSVQE 332 ++ S+ V + AD N LVI Sbjct: 424 TTQQTRNQNTNTNSQNRYSTNNQSNTELDLVSNVFNTPVRLFADGVQNRLVIRTTPRTYA 483 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG 392 + ++ RLD+ AQVL + +IVE+ + G+Q+ N + G +TG + Sbjct: 484 MIKALLDRLDVVPAQVLFQILIVEITLTDSNEFGLQFNNVSYGGGTGVSTGTNFNDIGMN 543 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW----GVLLTALASNNKNDILATPSI 448 S+ G G F+ D L ALA + ++++P + Sbjct: 544 D-------------------SSSEGFKLGIFDKDNPEENFGYLRALAGRDNIKVISSPQL 584 Query: 449 VTLDNKLASFNVGQDVPVLSGSQTTS---GDNVFNTVERKTVGTKLKVTPQVNEGDAVLL 505 + N A VGQDVP+L+ TTS NV + + G L + PQV D + + Sbjct: 585 LVTSNTTAKIQVGQDVPILTQDLTTSDSATGNVTRSYTYEETGIILSLIPQVTSTDLISM 644 Query: 506 EIEQEVSSV--DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 +IEQ+VS ++ +++T P +TR + A+ + G+T+V+GG++ + + +++ VP++ Sbjct: 645 QIEQKVSEAIKNTITSATDTPVISTRVLNTAMTIANGKTMVIGGMIQEKNNDRLQSVPII 704 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKS 623 DIP + + F T+ + L+V + I+ + + + + D + Sbjct: 705 ADIPFLRRFFGNTNQSVERTELLVLVTGYIVNGKSPVEEMIRRYNSSVKALSLFESDMEK 764 Query: 624 KALVGSEDLPVLDENTF 640 K +E L V E Sbjct: 765 KDKEDAERLKVKVEAVP 781 >UniRef50_A3UH04 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UH04_9RHOB Length = 622 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 135/641 (21%), Positives = 269/641 (41%), Gaps = 49/641 (7%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGT---ISVRSNDTFS 71 ++ + A + F++ V G+ L + P V +++RS + S Sbjct: 1 MLTDSLALRGPSINATLPAQPLPSFLDTVLGEILEIPYALGPGVSDRDDIVTLRSVEDMS 60 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL--VTRI 129 Q ++ F + + YG +V T DN + V RS P +I +R V +L V + Sbjct: 61 PQTFFTLFETAIGEYGLAVETHDNMVVVVERSDLRSAMPQIIQARARSSVASQLRPVIQF 120 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 V + A + ++RQ+ + N + LTG + +N +I+++D Sbjct: 121 VEFDYADAAVIEAVVRQVFPDTQGLGIQTRRDINSMTLTGLSDIVNSANRLIEQLDRPRF 180 Query: 190 EKQQIIHL--EYASAEDLAEILNQLISESHGKSQMPALLS--AKIVADKRTNSLIISG-P 244 + L A +LA+ L ++S + + ++ ++TN +++ Sbjct: 181 AGATAVALSPRNWEAAELAQTLTDILSLEGFQIGLGGRQPRPLTLLPLEQTNQILVFAKN 240 Query: 245 EKARQRITSLLKSLDVEESEEGNTR--VYYLKYAKATNLVEVLTGV---SEKLKDEKGNA 299 E + + + + L+ E TR VY ++ A L ++ V + + Sbjct: 241 EDSLGHLIATARRLEEAAEHEDVTRSYVYQVRNTDAEELANIIRTVLGETGRSSSTGAET 300 Query: 300 RKPSSSGAMDNVA--ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEV 357 ++GA V+ + D N L+ T +++ + LA ++ +LD ++VLVE I EV Sbjct: 301 TAGETAGASSAVSSRLAVDTFGNRLIFTGNRNEYDNLARLLGQLDTPVSEVLVEVTIAEV 360 Query: 358 QDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG 417 + LGV++ +G T + ++ G++ G Sbjct: 361 IFSDTTRLGVEFFLNTLGGDVQVGTSDGLGLSSGGLSAIVDAG----------------- 403 Query: 418 MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG-----SQT 472 + A ++N+ ++L+TP IV + A VG DVP+++ +Q Sbjct: 404 --------QLDIEAAARSTNSNINVLSTPRIVARSGESAEVQVGTDVPIITSQRAANTQD 455 Query: 473 TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTI 531 + ++ +V ++ G L V P+V + + L I QEVSS D + N + P + R + Sbjct: 456 SGSTDILQSVSYRSTGVLLTVEPRVYSNNRIDLTIMQEVSSADDNPNQAIASPIISNRRM 515 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 +++ ++ G+T VLGGL+ + + VPL+ DIP++G +F+ + +R L+V + P Sbjct: 516 TSSITLQDGQTAVLGGLMSETVNRGSTGVPLVQDIPVLGNIFKTETFSNDQRVLLVLVTP 575 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 I+ D + + + R+ + S+ + Sbjct: 576 YILNDRNDRQEIVDVFQGEVNDAFVSRLGPGATFFRRSQPI 616 >UniRef50_A7IH57 General secretion pathway protein D n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IH57_XANP2 Length = 767 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 155/673 (23%), Positives = 261/673 (38%), Gaps = 105/673 (15%) Query: 22 HAENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL 80 + Y NF+N + ++V G LG +IDP VQGT+++ S + E Sbjct: 101 SGGADGYDLNFDNTPVTSVAKVVLGDILGVGYVIDPRVQGTVTLASARPVPKTELLYVLE 160 Query: 81 SILDLY---------GYSVIT---------LDNGFLKVVRSANVKTSPG-MIADSSRPGV 121 + L GY ++ D G + + P ++ + + Sbjct: 161 AALKTNNVAMVREGAGYRLVPLTEAAGGGNADVGTSRPEPGYGISVVPLRYVSAEALMPL 220 Query: 122 GDELVTR-------------------------------------------IVPLENVPAR 138 D TR + P+ N Sbjct: 221 LDSFATRAGAVRADPGRNLLIVQGTGSERQSAINTVLSFDADWMRGQSVGVYPVRNSAPE 280 Query: 139 DLAPLLRQMMDAGSVG---NVVHYEPSN----VLILTGRASTINKLIEVIKRVD-VIGTE 190 L L +MDAG G +V ++ N ++++ + + I R+D T Sbjct: 281 PLISELESIMDAGDSGLSHKMVKFQAINRLNAIMVVAKKPELLQTAGTWIGRLDRSDTTV 340 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 ++ L Y A+ +A++LN+L G S +++I + G + Sbjct: 341 GVRVYRLRYGDAKQMAKVLNELF--VGGSSSGLDQAASQIAPGSGASVSSGGGSDGNGSG 398 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 ++ + + +T K + SE + Sbjct: 399 SGLTVQQRLGQSPPKQDTGGTGGK---------TIAVDSEGAPVGGSGGGAGGGGALLSG 449 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 + ITAD NSL+I A Q + + +LD + QV +EA + EV + L GVQ+ Sbjct: 450 IRITADAINNSLLIFASQENYRIIERTLMQLDQPQLQVAIEATVAEVTLNDTLAYGVQFY 509 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + N G + + + D N + N + + Sbjct: 510 LTSKDLGLGRNNGSVLNTLSSDITDQAINRVLPGFNLLVGRENQP------------RAI 557 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNTVERKTVG 488 L AL + +L+ PS+V +DN+ A+ VG +VPV +GS T +S + V NT+E K G Sbjct: 558 LDALHTVTDVKVLSNPSVVVVDNQKATLQVGDEVPVSTGSATVLSSSNTVVNTIEYKNTG 617 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST---------LGPTFNTRTIQNAVLVKT 539 L V P+VN V LEIEQE+S+V S +T L PT + R +++ + V + Sbjct: 618 IILHVVPRVNVNGQVRLEIEQEISNVTQSDPTTSGTSSNSTGLTPTVSQRKVKSVIAVAS 677 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 G+TV+L GL+ + VP+L IP VG F +T+ + L++FIRP IIRD+ Sbjct: 678 GQTVLLAGLISERHNGVRQGVPILDQIPGVGDAFAHTNGTVKRTELIIFIRPQIIRDNVD 737 Query: 600 YRSLSKEKYTRYR 612 ++++E + R Sbjct: 738 AHTVAEELRAKLR 750 >UniRef50_B8ESI9 General secretion pathway protein D n=1 Tax=Methylocella silvestris BL2 RepID=B8ESI9_METSB Length = 805 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 158/683 (23%), Positives = 265/683 (38%), Gaps = 107/683 (15%) Query: 28 YGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 NF NA I +++ G LG +DP VQGTI++ S + S L Sbjct: 109 VDLNFENAPITAVAKVILGDVLGVGYAVDPRVQGTITLSSGRPVPKSRLLSVLESALRTS 168 Query: 87 ---------GYSVITLDNGF-----------------LKVVRSANVKTSP--------GM 112 GY +I +D+ + VV +V Sbjct: 169 NAVLVNDAGGYRIIPVDDAVGNGSVDRGGSRLEPGYGMTVVPVQHVSVQTINKLLEGFAT 228 Query: 113 IADSSRPGVGDELV----------------------------TRIVPLENVPARDLAPLL 144 + R G +V I P++N + L Sbjct: 229 RPGAIRVDSGTNMVIIVGTGVERRTAVDTVLSFDQDWMRGQSVGIFPVKNTTPEPIVVEL 288 Query: 145 RQMMDAGSVG---NVVHYEPSN----VLILTGRASTINKLIEVIKRVD--VIGTEKQQII 195 +++D+G G N+V + N VL++ + + I R+D + ++ Sbjct: 289 EKILDSGEAGLSQNMVKLQAMNRSNAVLVVARKPELLRAAATWIARLDGSATASTGVKVY 348 Query: 196 HLEYASAEDLAEILNQLISESHGKSQ------MPALLSAKIVADKRTNSLIISGPEKARQ 249 + Y A+ +A +L+ L + G S P S+ D+ T Sbjct: 349 RVRYGDAKLIARLLSDLFTGGGGSSDSAANSLAPGSGSSVSTTDRLTGGTASLAASAGGG 408 Query: 250 RITSLLKSLDVEESE-----------------EGNTRVYYLKYAKATNLVEVLTGVSEKL 292 S + A G + Sbjct: 409 GSAGSSLGAGSGSSSSSSSLGAGAGSSSGAGSQSPFGTLGTAAGAAGGADSSAGGGAGSS 468 Query: 293 KDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEA 352 G + V I AD NS+VI A+Q + + +LD + QV ++ Sbjct: 469 SGGLGGGGGGKGPVLLPGVRIMADAANNSVVIYANQESYRIIEKALEQLDRPKLQVAIDL 528 Query: 353 IIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMF 412 I EV + LN GVQ+ + N G + N A GV + GG+ SA F Sbjct: 529 TIAEVTLNDTLNYGVQFFLGSSNLGLGANNGF-VTNTAAGV-PLAQTGGVASAAGTLPGF 586 Query: 413 SAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT 472 + G A ++ AL +L+ PS+V +DN++A+ VG ++P+ +GS T Sbjct: 587 NLTIGNAL-----SPRAIINALHQYTDVKVLSNPSLVVVDNQVATLQVGDEIPIQTGSAT 641 Query: 473 --TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRT 530 ++ + V NT++ K G L+V P+VN V L++EQE+S + + S LGPTF+ R Sbjct: 642 VLSANNAVVNTIDYKNTGIILRVQPRVNFNGNVSLDVEQEIS--NQAGTSALGPTFSQRK 699 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE-RAKRNLMVFI 589 +++++LV +G+TV+L GL+ D + +P+ IP++G LF +S ++ L++FI Sbjct: 700 VKSSILVASGQTVLLAGLISDGVNGTKAGIPVADQIPVLGNLFNNSSNRLVSRTELIIFI 759 Query: 590 RPTIIRDDDVYRSLSKEKYTRYR 612 RP IIRD +++E ++ R Sbjct: 760 RPQIIRDGVDASFVAEELRSKLR 782 >UniRef50_A4A016 General secretion pathway protein D (Precursor) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A016_9PLAN Length = 1199 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 121/501 (24%), Positives = 224/501 (44%), Gaps = 44/501 (8%) Query: 154 GNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQIIHLEYASAEDLAEILNQ 211 + SN L++ +++ + +I+R+D + ++ + A LA +L Sbjct: 580 AQITADTRSNALVVRAPKDSMDLIGALIQRLDSQPSAESQIKVFTIVNGDATQLATMLET 639 Query: 212 LISESHGKSQM-----------PALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV 260 L G +Q L+ + D RTNS+I SGP + + ++L LD Sbjct: 640 LFGLDEGTTQGQQPFAIGAGGDNTLVPIRFSVDSRTNSIIASGPASSLAVVEAILLRLDQ 699 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT- 319 ++ ++ V LK + A + E LT + + + +SS + +T Sbjct: 700 DDVQQRQMLVVRLKNSNALLVAESLTELLQTESQLQQIDPTLTSSFQQVAREVIVVPETF 759 Query: 320 -NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA-------N 371 NSL+ITA +++ ++ LD R V ++ +I +V+ G LG ++ + Sbjct: 760 SNSLIITATPRYFKQIVKIVEELDARPPMVSIQVLIADVRLGKIEELGFEFGLQDSLLFD 819 Query: 372 KNVGAQQFTNTGLPIFNAAQG----------VADYKKNGGITSANPAWDMFSAYNGMAAG 421 ++ + + G NAA G + G + Y G Sbjct: 820 RSTVSSGQLDPGYNFNNAALGNSSSAASLATASAVGSQGLSDLGLGRTNPALGYGGFVFS 879 Query: 422 FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT 481 + VL+ AL +N+ ++LA P ++T+DN+ A VGQ VP ++ +Q T+ V N+ Sbjct: 880 AASESVNVLIRALQQDNRMEVLARPHVMTMDNQPAFIQVGQRVPYITDTQVTNQGTV-NS 938 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVS-----------SVDSSSNSTLGPTFNTRT 530 + + G L V P+++ V++ ++ E S S++ + + P NT+T Sbjct: 939 ITLENTGVILNVIPRISPDGMVVMYVQAERSEVGNEADGIPISINQNGDVIRAPRINTQT 998 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 V ++G+T+VLGGL+ + +VPLLGDIP+VG LFRY S + + LM+ + Sbjct: 999 ATTTVSARSGQTIVLGGLIQKRTTVVSRRVPLLGDIPVVGSLFRYDSFDGDRSELMIILT 1058 Query: 591 PTIIRDDDVYRSLSKEKYTRY 611 PT++ D + +++ +R Sbjct: 1059 PTVVDSDQDVERVREQEMSRM 1079 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 101/235 (42%), Gaps = 21/235 (8%) Query: 136 PARDLAPLLRQMMDAGSVG--NVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ 193 PA + L DAG +G + E +V+++ G + ++ +I ++ + E Q Sbjct: 307 PAVEDQVTLGPDDDAGLIGPVQIEFLEGLDVIVVRGHRRDVERITRIINDIERLSAETQP 366 Query: 194 IIHLE---YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 +I + +A++E +A + QL + I R N++++ G +++ Sbjct: 367 VIEVRELLHANSEAVAATILQLYEDLLQTRYG----QVSITPLGRPNAILLIGRQQSVDG 422 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 I L++ LD E RV+ LKY + + +T + Sbjct: 423 ILDLIEKLDQPVGPERMLRVFQLKYLSSADAQTRVTEFYAEP------------VNLNPR 470 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 V TAD ++N+L++ A ++ +I ++D+ A+ +E + E+++ +L Sbjct: 471 VRSTADYRSNALIVQASPRDMAEVEYLIRQIDVPAAESTLELKVFELRNSLAEDL 525 >UniRef50_C5B3Y6 Putative General secretion protein D n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B3Y6_METEA Length = 693 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 146/667 (21%), Positives = 259/667 (38%), Gaps = 97/667 (14%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFS 71 A P + NF N ++++F V + L + +++DP+V G I+VR+ + S Sbjct: 43 TASGRPIEIGPSGHEVRLNFVNVELQEFARAVFEEVLHENVIVDPAVTGRITVRAGNPIS 102 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP 131 ++ L G ++ N ++ + G E+V R++P Sbjct: 103 KKAALALVREALQASGATLSRPGN-VWRIGPA------------PRNAGPSREMV-RVIP 148 Query: 132 LENVPARDLAPLLRQMMDA-GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--- 187 L + + ++ + A G+ +V L+L GR + + L +V+ DV Sbjct: 149 LRFIGITEARGAIQPFLGANGNTSDVAASGTGRFLVLAGRTAEVEGLEQVVATFDVDELR 208 Query: 188 -----------------------------GTEKQQIIHLEYASAE-------DLAEILNQ 211 + ++ +E +A D+ E + Sbjct: 209 GRAFALVPLKQAGAAPVAQDLLRMIGSEGIAQGVKVFPVERMNAIMVASSNPDVIERVRG 268 Query: 212 LISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVY 271 I Q + V ++R + I + Q + D G T + Sbjct: 269 WIGGLDQSGQDQRRVYIYPVRNRRA-AEIAKVLDGMLQGRGRVEAGTDGPAVAPGLTPQH 327 Query: 272 YLK----------------YAKATNLVEVLT-------GVSEKLKDEKGNARKPSSSGAM 308 A ++ L T G E N+R + A Sbjct: 328 GSLSGTGSGSRGGLGNASFGAGSSGLSAQFTALPSSEFGREENSLGTSTNSRSQGARDAQ 387 Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 V + AD TN+LV+ + +A+ I LD+ QVL+EA I EV+ L GV+ Sbjct: 388 SGVEVRADIATNTLVVVSRPEDYHIVASAIRNLDVLPTQVLIEATIAEVRLNEALRHGVR 447 Query: 369 WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWG 428 W + G Q + G + + V G I + + Sbjct: 448 WYFQAGGLGQGASMGSGFGTSGRSVTGQGSAGEIA--------------LTYSLGLANAK 493 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ---TTSGDNVFNTVERK 485 + ++AL S +I+++P++ LDN+ A+ VG+ VP+ + S + + N +E K Sbjct: 494 LAISALESVTDVEIVSSPALTVLDNQTATLKVGEQVPIATRSARSVVNADAPLVNDIEMK 553 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETVV 544 G L+VTP+VN G V+L+I+QE S V ++ S L PT R I + + VK+G +V Sbjct: 554 DTGVILQVTPRVNAGGLVMLDIKQEASDVVPTTTSNLDSPTIRLRQITSTIAVKSGAEIV 613 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 LGG++ VP L DIPL+G + + + L++ IRPT++ ++ +++ Sbjct: 614 LGGIIQRGRHRGAGGVPFLRDIPLLGTALNNIDSGQDRTELVIIIRPTVMANNAEVSTVT 673 Query: 605 KEKYTRY 611 E R Sbjct: 674 GEIKRRL 680 >UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L240_HALNC Length = 729 Score = 308 bits (788), Expect = 5e-82, Method: Composition-based stats. Identities = 100/439 (22%), Positives = 189/439 (43%), Gaps = 38/439 (8%) Query: 179 EVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS 238 ++ DV G+ ++ ++ + A DL L+ K ++ ++ + Sbjct: 308 NIVVSDDVKGSISLRLENVPWDQALDLI-------------------LTTKGLSMRKNGN 348 Query: 239 LIISGPEKAR--QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 ++ P + + ++ +T + + YAKA ++ ++L S+ K Sbjct: 349 VMYVAPTADIVARDKAEIEARQQSQQLAPLSTDIIQINYAKADDIYKLLESASKTGKTSA 408 Query: 297 -GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 G + D ++T D ++NSL++T S +++ +I +LD QVL+E IV Sbjct: 409 DGKGGDTAQRFISDRGSVTVDPRSNSLIVTDTASALDRIRDLIHKLDKPVKQVLIETRIV 468 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN--------- 406 D LGV+W + + + GL G ++ Sbjct: 469 IATDNFARQLGVRWGVQAGFNRGNSTFGLGSTAPLVASGTSLPTAGASTGTVGTAPTDWM 528 Query: 407 ---PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 P + G+A N + L+AL S +I+++P ++T + A + G + Sbjct: 529 VNTPISGTPAGSLGLAILGSNVLLDLELSALQSEGTGEIVSSPKVITTNGHTALISQGTE 588 Query: 464 VPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS--NST 521 +P ++ T+G NTV K +VTPQ+ + ++++I+ + D ++ T Sbjct: 589 IPYIATQ--TAGGVASNTVSFKKAVLSTEVTPQITPNNNIIMDIDVKKDEPDYTNLLPGT 646 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 P NTR ++ V VK GETVVLGG+ + ++KVP GD+P +G LF+ + Sbjct: 647 TNPPINTREVKTKVEVKNGETVVLGGIYQFENNNSINKVPFFGDLPGIGNLFKNKEVKNQ 706 Query: 582 KRNLMVFIRPTIIRDDDVY 600 + L++F+ P II D Sbjct: 707 RLELLIFVTPKIINSDQSL 725 Score = 78.5 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 66/180 (36%), Gaps = 21/180 (11%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ F + IR ++++ G I++ V+G+IS+R + + IL Sbjct: 282 GERLTLKFQDIQIRPLLQLIADFTGNNIVVSDDVKGSISLRLEN-VPWDQALDL---ILT 337 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G S+ N + V I + L T I+ + A D+ LL Sbjct: 338 TKGLSMRKNGNVMYVAPTADIVARDKAEIEARQQSQQLAPLSTDIIQINYAKADDIYKLL 397 Query: 145 RQMMDAGS-----------------VGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 G G+V SN LI+T AS ++++ ++I ++D Sbjct: 398 ESASKTGKTSADGKGGDTAQRFISDRGSVTVDPRSNSLIVTDTASALDRIRDLIHKLDKP 457 >UniRef50_B8D2D9 Type II and III secretion system protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2D9_HALOH Length = 881 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 138/657 (21%), Positives = 263/657 (40%), Gaps = 131/657 (19%) Query: 1 MKGLNKITCCLLAALLM---PCAGHAENE------QYGANFNNADIRQFVEIVGQHLGKT 51 MK K+ L+ L++ P A N + NF A+I+ + + + Sbjct: 1 MKTHKKLLAGLMLYLIILSIPGFAFASNGIDSHPVKVDMNFEEAEIQDVLTAIASLVNIN 60 Query: 52 ILIDPSVQGTISVRSND-TFSQQEYYQFFLSILD-------------------------- 84 +++D SV G I+V+ ++ +F + Y +S LD Sbjct: 61 LVVDSSVSGEITVKLDNMSFKEALDYVVKVSGLDYVWKNDTVIVASSERLKSFYGEELVE 120 Query: 85 ---------LYGYSV---------ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 ++ Y + + +D+ LK++ S KT R V D L+ Sbjct: 121 TVSLKYSDPVHIYQLIKVFYPELKVQVDSNNLKLLMSGKRKTILAARNLIDRIDVPDSLI 180 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 T + + A L LR++ + +N+L++ G + + +E++ R+D+ Sbjct: 181 TATYVAKFINADSLENHLRRIYPG---LVLSSDRDNNILLIYGSKRKVREALELVNRIDL 237 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 E I+ + + E + L + + ++ ++ LIISG ++ Sbjct: 238 PRKEATFIVDINKGDVTRIEETVLNLFPD------------LVVEGNEASHKLIISGDKE 285 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 + L+K +D+ EE +T V + Y NL+ V+ G+ Sbjct: 286 EALKARDLIKEIDI--GEEIDTEVVRVDYGNLDNLISVIQGL------------------ 325 Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 ++ + ++ ++I + S +++ +++ LDI R QV++EA E+ G Sbjct: 326 -FPDIRLQSNPLKKEIIIKGNTSEVQEIVSLVNSLDIPRRQVIIEARFEEISANKISEFG 384 Query: 367 VQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD 426 ++ P + Q + D N Sbjct: 385 MR----------------PNLSEIQFIFDEATR-------------------ELKSMNIT 409 Query: 427 WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV-----FNT 481 W L L + ++LA P ++TL+ + A +G VPV + S + + Sbjct: 410 WPEYLRFLEEEGQANMLANPRLLTLNGENARLLIGDKVPVKIEETSGSSEESEGESNAVS 469 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS-SNSTLGPTFNTRTIQNAVLVKTG 540 E VG L+ TP + E +++++ EVSS+ S P TR + + +K G Sbjct: 470 YEYIDVGISLEFTPWITEDGYIIMDVAPEVSSLGSPMGGGESIPPIKTREARTKIRLKDG 529 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 +T +GGL+ + E ++KVPLLGDIPL+G LFR + T++ K +++FI P I+++ Sbjct: 530 QTFAIGGLIREDELESIAKVPLLGDIPLLGTLFRRSQTDKVKTEVVIFITPHIVKES 586 >UniRef50_Q07N78 General secretion pathway protein D n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07N78_RHOP5 Length = 789 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 144/662 (21%), Positives = 250/662 (37%), Gaps = 101/662 (15%) Query: 24 ENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 + Y NF D+ + I+G L LID V G I++ S+ + + Sbjct: 144 DGRSYQLNFEATDVAAVGKAILGDILNANYLIDSRVSGQINLTSSQAVPRSSLIPLLETA 203 Query: 83 L----------------------------------DLYGYSVITLD-------------- 94 L D YG +VI Sbjct: 204 LLSINATLSRDGTIYRISPVAEPRSLGNIGFQAATDGYGTTVIPARYVPAANLAKILDGL 263 Query: 95 ---NGFLKVVRSANVKTSPGMIADSSRPGVGDELV---------TRIVPLENVPARDLAP 142 +G +KV ++N+ G A+ +V I+P+E+ + Sbjct: 264 GGRSGTVKVEPTSNLLMIQGTAAERRALLGAAAMVDVDWMRTKSVAILPIEHAAPETVIA 323 Query: 143 LLRQMMDAGSVG---NVVHYEP----SNVLILTGRASTINKLIEVIKRVDVIGTE--KQQ 193 L +++ G G NVV +P + VL ++ R I+ + + + R+D + Sbjct: 324 ELNKILGTGEGGLSQNVVVLQPISRLNAVLAVSSRRDAIDHVTKWVLRLDAADDNAAGVK 383 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRIT 252 + L+YA A+ +A LN++ G + A + + N+ +G + A Q T Sbjct: 384 VYRLKYAQAKTVAATLNRMFGVRTGGTGQ---ADADQLEPGQDNTDGTNGEKVATAQPAT 440 Query: 253 SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 + + S G L + +K S SG V Sbjct: 441 TSGSTAPTPASNAGGVSSTNL----VKTSFGADSSAGQKPTGADDATSTDSRSGRSGKVR 496 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 +T D N L + + I +D QV +E I E+ + L GVQ+ K Sbjct: 497 VTPDVTNNVLFVETTPQTYAVVERAIREMDRFPTQVNIEVTIAEITLTSELQYGVQFFLK 556 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 + ++ G S P + N ++ D V+L Sbjct: 557 S--------------------GNFSAGLGGASGIPLRTSYPGLNLVSGALL--DPQVVLD 594 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN-VFNTVERKTVGTKL 491 ALA +L++PS+V LD + A VG +P+L+ T++ + V+ K G L Sbjct: 595 ALAQFTSVKVLSSPSLVVLDRQPAVLQVGDQIPILTRQLTSAESTATVSNVDLKDTGIIL 654 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDD 551 V P+VN V L +EQ++S+V S+ TL PT + R +++ + V +G+TV+L GL+ D Sbjct: 655 NVLPRVNANGLVTLNVEQQISNVVSTQPDTLTPTISQRRVKSVISVSSGQTVLLAGLITD 714 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 + +P++ I ++ L ++ L++FIRP II + +++E R Sbjct: 715 GQNINRNGLPVVSQIKVLSDLLSSHDRTASRTELIIFIRPKIIASGQDAQHVTEEFLGRM 774 Query: 612 RQ 613 R Sbjct: 775 RS 776 >UniRef50_A3UDE6 General secretion proteinD n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UDE6_9RHOB Length = 658 Score = 304 bits (778), Expect = 7e-81, Method: Composition-based stats. Identities = 132/604 (21%), Positives = 247/604 (40%), Gaps = 58/604 (9%) Query: 25 NEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + + NADI + +++G+HL I P VQG +++R D ++ + Q +L Sbjct: 69 GGPFSLVYRNADIATVINQVLGEHLQTDFTIAPDVQGQVTLRMQDVATRGDALQNLRDVL 128 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 S+I + V + + ++ G + ++ LE D+ L Sbjct: 129 APLSISLIDRGDFIAVVRGGGQQQGASVILTPGQAAPAGAGVA--MLSLEQAHPSDVETL 186 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK--QQIIHLEYAS 201 L + V V+ + V+++ G A+ + E + +DV ++ +I L+ + Sbjct: 187 LNALGTGAQV--VLADDQRQVIVVRGEAAALTAASEALALMDVDWLDEISTSLIPLQSTA 244 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 DL + + L+ ++ AL +A ++S + ++ LD Sbjct: 245 PSDLIQDIEPLLGPYASTIELIALDRISALA-------VLSARPNGIALVERWVRELDQP 297 Query: 262 ESEEGNTR--VYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA------------ 307 N R VY +++A LV + + + S Sbjct: 298 RRASSNPRQLVYTVRHADPEELVSAVRELLGYGQYGGVYGGNASGVNTGSASRSSQSSSQ 357 Query: 308 ----MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGL 363 D + I+A N ++ ++ ++ ++ LD RAQV +EA I+ V + Sbjct: 358 SYNDEDRLQISAVPSQNKIIARGPEARISEVRDLVELLDQPRAQVSIEAAIISVSLQDEF 417 Query: 364 NLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 GV W G A ++ + N S + G +A + Sbjct: 418 RFGVNW----------------------GAAPSEQIDVRFADNADGTAASVFPGFSATYL 455 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN---VFN 480 N D L L + + ++++ P+++ L N+ A VG VPV++ S + + + N Sbjct: 456 NTDIEATLNMLDAVTEIEVISRPNVMALHNQQAELQVGDQVPVITQSAVSVTNPDAPIVN 515 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKT 539 + G L VTP V G V ++I QEVSSV +S+S + PT R I + +LV + Sbjct: 516 QTAYRDTGVILSVTPHVRAGGIVEIDITQEVSSVVQTSSSGIDSPTIRQRRITSTLLVPS 575 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 G++V LGGL+ VP+L ++P+VG++F S + L++ ++PT+I D Sbjct: 576 GQSVALGGLIATTRTTNERGVPVLRELPVVGRVFGSDSESVDRTELVILLKPTVITDPSQ 635 Query: 600 YRSL 603 + Sbjct: 636 PSDV 639 >UniRef50_A8FXQ1 Type II secretory pathway component PulD-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FXQ1_SHESH Length = 696 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 130/611 (21%), Positives = 249/611 (40%), Gaps = 60/611 (9%) Query: 22 HAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQG-TISVRSNDTFSQQEYYQFF 79 +++++ N+ ++ F+ + G L +I +V+ I++ S ++ ++ Sbjct: 103 FSDSKELSVTVNDMTMKSFLNYVFGDLLSIDYVIGKNVENSKITLNVASKISPRKLFEMT 162 Query: 80 LSILDLYGYSVITLDNGFLKV---VRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 +L I L++G + + V + G DS V ++VPL+ Sbjct: 163 TQVLQEQRVG-IRLNDGIYYIYQLPQGGKVSVAMGFGRDSQSVPQNSGQVLQVVPLKYGV 221 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK--QQI 194 + L ++DA + + L + G I + +++I+ +DV + Sbjct: 222 RISVERTLNGLVDA----KITPDFEQSALFIQGTRDQIIRALDLIRLLDVPSNRGKYISL 277 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAK--IVADKRTNSLII-SGPEKARQRI 251 I + S +D +L+ + P + V + S+ + S ++ R+ Sbjct: 278 ISPVFISVDDFVSSTTELLKTEGIEIPKPGSNNGNLLFVPLSQLGSVAVFSAEQELLNRV 337 Query: 252 TSLLKSLDVEE-SEEGNTRVYYLKYAKATN----LVEVLTGVSEKLKDEKGNARKPSSSG 306 +D E +Y K+A+A++ + +++G S +K +++ S Sbjct: 338 EYWAAQIDKPSKGTERQYHIYTPKFARASDLGDSISPLISGESYSGNSKKTSSKDNKDSS 397 Query: 307 AMDN------------VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 +DN + + D ++NSL+ A + + + ++ R+DI QVL+ I Sbjct: 398 VVDNNSSMSTLTSNDKMTLVVDARSNSLIFHASGTEYQSILPLVQRMDILPKQVLLSVTI 457 Query: 355 VEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 EV+ G ++A + T GL + G +K Sbjct: 458 AEVKLTGEFKRGFEFALSSGNFSGSTKGGLGLDEIVGGTFSWKSGANEIIG--------- 508 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 + N++ +IL+ PS++ D A+ NVG +PV SGS ++ Sbjct: 509 -----------------KFVEENSQVNILSKPSLLVRDGTEANINVGDKIPVSSGSSSSG 551 Query: 475 G-DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS-VDSSSNSTLGPTFNTRTIQ 532 + V + + G KL VTP VN V++EI QE+S+ V PTF R+I+ Sbjct: 552 SGEVVTENITYRETGIKLTVTPTVNAQGVVIMEINQEISNQVVGPVGKGGNPTFFDRSIK 611 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 V+ TG+T++LGGL+ D + VP L IPL+G LF S K L++ + P Sbjct: 612 TEVVADTGQTILLGGLISDDTTNSNKGVPYLKSIPLIGALFESDSKNNTKTELVIMVTPK 671 Query: 593 IIRDDDVYRSL 603 I+ + + Sbjct: 672 IVERSSQWNGI 682 >UniRef50_A4C8H8 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C8H8_9GAMM Length = 685 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 121/608 (19%), Positives = 261/608 (42%), Gaps = 54/608 (8%) Query: 22 HAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQG---TISVRSNDTFSQQEYYQ 77 +E + + ++ F+ ++G+ L + ++ ++ ++++ + ++++ + Sbjct: 94 FSEQKTIEMSAETLPLQDFLHLVLGERLKVSYVLSDEIKADSQSVTLNIQNAVTERKLFL 153 Query: 78 FFLSILDLYGYSVITLDNGFL---KVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 ++D GY++ DN F K + G + + ++VP E Sbjct: 154 LTEELIDERGYTIRFNDNIFYVHKKNSEQGQTDLTYGYGKSINDVPQTSGDIVQMVPFEY 213 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 ++ LRQM+ S N + + G+ I + +E+I D + I Sbjct: 214 GMQLSMSNTLRQMIGVKS----TSDPARNTINIFGKRQDILRALELIDIFDRPAIANRHI 269 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAK----IVADKRTNSLIISG-PEKARQ 249 + + + ++ + +V ++ N LI + + Sbjct: 270 GVYKSTFVNGTELLTKLKELLTQEGIKLGDGIDTSSTITVVNMEKQNRLIFFAVKQDVIE 329 Query: 250 RITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGV--------SEKLKDEKGNAR 300 R +D ++ E +Y +Y++A ++ E L + + ++ + + Sbjct: 330 RAIFWANQIDKPIDTAEKQYFIYQPQYSRAVDMGESLEALIGEVSSLTTSTSAAQENSRK 389 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 + + + + +++ + DE++NS++ +++ ++ RLDI Q+++E II EV Sbjct: 390 RGAVTASSEDLKMVIDERSNSVIFFTTGEKYQQILPLVKRLDILPKQIMLEVIIAEVSLT 449 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 N GV++A KN G ++ M + G++ Sbjct: 450 NEFKQGVEFAFKN--------------------------GNYGTSTEKAFMGDGFGGLSY 483 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL--SGSQTTSGDNV 478 +++ L +N+ +IL+ PS+V D A+ NVG D+P++ + S +GD Sbjct: 484 LLQGTQGKLIVNLLQTNSLVNILSRPSLVVRDGVNATINVGTDIPIVGETASDPINGDRQ 543 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS-VDSSSNSTLGPTFNTRTIQNAVLV 537 +E + G +L VTP VN VL+EI+Q++S+ V+S S + P+ RTI V+ Sbjct: 544 TTKIEYRKTGVELAVTPTVNAQGIVLMEIKQKISNQVESGSTVSGNPSVFERTINTEVVA 603 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 ++G+T++LGGL+ + + S+VP IP++G LFR + K L++ + P +I Sbjct: 604 ESGQTIILGGLISENKSTKASRVPFFSGIPILGNLFRADTESGDKTELVILVTPRVIESS 663 Query: 598 DVYRSLSK 605 + + K Sbjct: 664 SEWDDVKK 671 >UniRef50_UPI0001744674 general secretion pathway protein D n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744674 Length = 759 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 144/763 (18%), Positives = 276/763 (36%), Gaps = 120/763 (15%) Query: 1 MKGLNKITCCL----LAALLMPCAGHAENEQYGANFN--NADIRQFVEIVGQHLGKTILI 54 MK L LA L A + + A I + +EI + GK I+ Sbjct: 1 MKAFLNRAVVLSFLALAGTLASQDIPAPSPGTRLSLQKPGAPIGEILEIYQELTGKKIIR 60 Query: 55 DPSVQGTI-SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPG-- 111 DP ++G + S+ + + + +F L + GY+++ +KV+ K Sbjct: 61 DPKLEGVVLSMDTGGEMPKAQVIEFIEKSLLISGYAIVPSGEQMVKVLAFEAGKLPSTEG 120 Query: 112 --MIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTG 169 MI D+SR GD++V+ ++PL+++ A + L Q++ G ++ ++ L++T Sbjct: 121 VDMILDASRLPQGDQVVSYLLPLQHLDADEAGQALSQIITLHPYGKILAVPKASALVITE 180 Query: 170 RASTINKLIEVIKRVDVIGTEKQ-QIIHLEYASAEDLAEILNQLISES------------ 216 ++TI +I+++++VD +E + LE A AE++A + L+ Sbjct: 181 NSTTIRAIIDLVRQVDTPSSETTTKKYFLERADAEEVARTIGTLLGLDATATATPAAARS 240 Query: 217 -------------------HGKSQMPALLSAKIVADKRTNSLIISGPEKARQR------- 250 K+V R N+L++ + Sbjct: 241 APGDSRGVAKGGVTGGGVITAGGNGSGRTPPKLVPIARQNALLVIARPVDMAQIETLIKE 300 Query: 251 ------ITSLLKSL------------------------DVEESEEGNTRVYYLKYAKATN 280 I S + + + NT+ + ++A N Sbjct: 301 FDDESPIRSFISRKVRYMDLTEFVEVAQNALLRGVVDPNGPQPLGQNTQQTSVATSRAGN 360 Query: 281 LVE---------------------VLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 + + + S S + + D Sbjct: 361 TSSDNGGRSSSYGSGLGGGSGFGGGAAAFQNETRTLEDTVLPRSQSILIGKTLVIVDPPN 420 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQ- 378 ++ + L ++ ++D R Q+++ AII E G G+ W Sbjct: 421 STFYASGPPDQLRMLDDLLTQMDKRPPQIILSAIIGEFTTGKDFRFGLDWVRTLEQVNDN 480 Query: 379 --FTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALAS 436 + D G + PA + Y G V L L Sbjct: 481 LVIGGINKTSTTETNAMTDLAALGNVADFLPALQGLTVY-----GKIGKHLNVFLNTLEE 535 Query: 437 NNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT------SGDNVFNTVERKTVGTK 490 +++ +L P + TL++K A+ + GQ + + + ++ + + + K Sbjct: 536 SDRFHVLQRPYVTTLNHKKATISTGQQLAIPGQTYSSGIGSDPDTNGFVSNTQYIPAELK 595 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG--PTFNTRTIQNAVLVKTGETVVLGGL 548 L + P + + + V LE Q+ + S + + P +T+T+ N V+V G T++LGGL Sbjct: 596 LDIVPHIYDKNEVKLEFVQQNLDIASYTTISGNQVPNLSTQTLSNTVVVPNGATIILGGL 655 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD--VYRSLSKE 606 + + + S VP+L IPLV LF T+ + +R LM+F++P I+ DD + + E Sbjct: 656 ITERDRNNKSGVPVLSRIPLVKHLFGSTAKTKERRELMIFVQPIIVASDDSIAQKQVPIE 715 Query: 607 KYTRYRQEQQQRIDG-KSKALVGSEDLPVLDENTFNSHAPAPS 648 R E QQ + + L+ + D P P+ Sbjct: 716 NLNRSFPEVQQFAEQPQPTPLLPAWDPPPAKAPARQEKKSFPA 758 >UniRef50_B8E238 Type II and III secretion system protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E238_DICTD Length = 1421 Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats. Identities = 130/599 (21%), Positives = 246/599 (41%), Gaps = 73/599 (12%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 ++A L+ + + +ADIR+ + +G+ +ID V G I + Sbjct: 882 AVVAKELLTVEREGDKVYVSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLY---- 937 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 ++ E + +I+ G IT ++ V T P +A T+I Sbjct: 938 LNRVELPEVL-NIIQKVGKLSITTEDKVTYVKPYEEKVTVPVEVAK-----------TKI 985 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 L+ + D+ + ++ ++ + + + +LI G+ + L ++I R+DV Sbjct: 986 YALKYITLSDIERVGGSLVKN---LSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKK 1042 Query: 190 EKQ---QIIHLE------YASAEDLAEILNQLISESHGKSQMPALLSAKIVA--DKRTNS 238 E +++ +E Y S + + + +++ E K+ + ++ K+ D N Sbjct: 1043 EAVVAKELLTVEREGDKVYVSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNR 1102 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE--K 296 + + + RIT++ + G+ T E V+++ K + Sbjct: 1103 VELPETLEILSRITNISFE------KVGSATFVKPLNTTVTTAKEGTPTVTKEYKLKYIS 1156 Query: 297 GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 + K SG +V+ D+ + L++ + ++IA+LD QV ++ ++E Sbjct: 1157 LDTLKSVVSGIAKDVSFYYDQTSGLLLVQGPADQVSSVESMIAKLDKPTPQVKIDVQVIE 1216 Query: 357 VQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 V N ++G++W+ ++ L + + + Sbjct: 1217 VSRENVKDIGIEWSTGSISTGLQITANLGWQDLRVSIVNP-------------------- 1256 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 G + AL + NK ILA PS+ TL K +G VP++S + Sbjct: 1257 --------GQISANIRALETQNKARILAQPSMTTLSGKATRIMIGDRVPLISYDAQGN-- 1306 Query: 477 NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVL 536 V VG L VTP VN + I +VS++ + P +TR Q V Sbjct: 1307 ---RQVSFVDVGIILNVTPTVNADGTITANINPQVSTI--QGYVSDVPIISTREAQTIVN 1361 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 +K GET+ LGGLL + +SKVPLLGDIP++G+LF+ T++ +R L++ I P +I Sbjct: 1362 LKNGETLALGGLLRQEEIDSMSKVPLLGDIPILGELFKARKTQKVERELIILITPKLIE 1420 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 142/362 (39%), Gaps = 36/362 (9%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 ++A L+ + + +ADIR+ + +G+ +ID V G I + Sbjct: 720 AVVAKELLTVEREGDKVYVSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLY---- 775 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 ++ E + +I+ G IT ++ V T P +A T+I Sbjct: 776 LNRVELPEVL-NIIQRVGKLSITTEDKVTYVKPYEEKVTVPVEVAK-----------TKI 823 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 L+ + D+ + ++ ++ + + + +LI G+ + L ++I R+DV Sbjct: 824 YALKYITLSDIERVGGSLVKN---LSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKK 880 Query: 190 EKQ---QIIHLE------YASAEDLAEILNQLISESHGKSQMPALLSAKIVA--DKRTNS 238 E +++ +E Y S + + + +++ E K+ + ++ K+ D N Sbjct: 881 EAVVAKELLTVEREGDKVYVSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNR 940 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 + + Q++ L + E K T VEV LK + Sbjct: 941 VELPEVLNIIQKVGKL------SITTEDKVTYVKPYEEKVTVPVEVAKTKIYALKYITLS 994 Query: 299 ARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 + + N++++ D++T L+ + + L +I+R+D+ + + +V ++ V+ Sbjct: 995 DIERVGGSLVKNLSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKKEAVVAKELLTVE 1054 Query: 359 DG 360 Sbjct: 1055 RE 1056 Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 19/166 (11%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ +F+ A+IR ++ +GQ +G I+ D VQG ISV ++ F ++L Sbjct: 311 QQRISVSFDRAEIRDVLKAMGQLVGLNIITDIGVQGRISVYL-KDIPFKDA---FYALLA 366 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 I + D + +L+T++ L+ ++ +L Sbjct: 367 SSDLGYIQQGEIII------------VANLDKLQKIESRDLMTKVYQLKYFESQKAKDIL 414 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 ++ + N LI++ S K+ IK +D+ Sbjct: 415 SKISKTAIF---DSDDSRNWLIVSAPPSEFAKIENTIKTLDIPSES 457 >UniRef50_D2QZD1 Type II and III secretion system protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZD1_9PLAN Length = 1314 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 122/532 (22%), Positives = 231/532 (43%), Gaps = 43/532 (8%) Query: 155 NVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK--QQIIHLEYASAEDLAEILNQL 212 + N +++TG ++ + +I+++D + + ++ +E A LAE L L Sbjct: 604 RITADPRGNSIVVTGPTQSMPLMQALIEQMDALPATEAQIKVFTIENGDATALAETLQNL 663 Query: 213 ISE---------------SHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS 257 + + + +L+ + D RTNS++ SG + +L Sbjct: 664 FGQQQQGGGQNQGQFGLQTATGAGDSSLVPLRFSVDTRTNSIVASGTTGDLNVVYQILVR 723 Query: 258 LDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKD-EKGNARKPSSSGAMDNVAITAD 316 LD + + T VY L+ + A ++ + + +D + NA + + I Sbjct: 724 LDEGDIRQRVTTVYRLRNSPAADVATAINELLTNQRDLSQQNAELTTQFEQFEREVIVVP 783 Query: 317 E-QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN-- 373 E +NSL+++A +++ V+ LD R V+++ +I EV + LGV+ ++ Sbjct: 784 EIVSNSLIVSATPRYFDEIKKVVEDLDRRPPMVIIQVMIAEVLLSDVEQLGVELGIQDSL 843 Query: 374 VGAQQFTNTGLPIFNAAQGVADYKKN----------GGITSANPAWDMFSAYNGMAAGFF 423 + + + G P N A G + G + D Y G+ Sbjct: 844 LFDRGIGSVGFPFNNVALGNNSDATSLATRESVAGQGLSSFGVGRTDPTLGYGGLVLSAS 903 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVE 483 + VL+ AL + + +++ P + TLDN+ A VG VP ++ SQ T + NTV Sbjct: 904 SESVSVLVRALQQSRRLQVISRPQVQTLDNQPAFVQVGARVPRITSSQLTVNGTINNTV- 962 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVS-----------SVDSSSNSTLGPTFNTRTIQ 532 + VG L VTP+ +++EI+ E S S++S+ + P T Q Sbjct: 963 LENVGIILGVTPRTAPDGMIVMEIDAEKSELGPEAEGIPISINSNGDVIRSPQIRIATAQ 1022 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 V ++G+TV++GGL+ +E +VP LGDIP++G+LFR+ S +R L++ + P Sbjct: 1023 TTVSARSGQTVIIGGLITKNQQESTRRVPYLGDIPVLGRLFRFDSVSDERRELLIILTPF 1082 Query: 593 IIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHA 644 I+++D+ ++ + R ++ L+GS E + Sbjct: 1083 IMQNDEDIEWMNMRESERMSWCMADVVNIHGDVLLGSGPQAPASEASPLIFP 1134 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 93/455 (20%), Positives = 168/455 (36%), Gaps = 60/455 (13%) Query: 102 RSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA-----GSVGNV 156 + A+V+ +I + R + V I L+NV R L+ L+ + D S + Sbjct: 346 KKADVERVLKIIDEIERQSEETKPVVEIYTLKNVDGRALSDLVATIYDQVFSARQSRVTI 405 Query: 157 VHYEPSNVLILTGRASTINKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAEILNQLIS 214 N L+L GRA I ++E+++++D V + ++ L++ S+ D + Sbjct: 406 TPLVKPNALMLIGRAEAIPPVVELLQKLDQTVSPESQLKVFRLKFMSSIDAERTVRNFFV 465 Query: 215 ESHGKSQMP-ALLSAKI--VADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGN-TRV 270 + G P L ++ +A+ RTNSLI+ ++ + LL +LDV SE N R+ Sbjct: 466 DRPGFGTDPRTGLGTRVLTIAEYRTNSLIVQASQRDLLEVQKLLDTLDVAASESANEVRI 525 Query: 271 YYLKYAKATNLVEVLTGVSEKLKDEK---------------------------------- 296 + LK A A L VL Sbjct: 526 FKLKNAVAEELAPVLQEAVTGQIQGAGQQQGQQQQQQGQSGQGAQTPATATRRSTNLQLL 585 Query: 297 ---GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD-IRRAQVLVEA 352 R SG + ++ ITAD + NS+V+T + +I ++D + + ++ Sbjct: 586 RVDSEGRGVLESGILSDMRITADPRGNSIVVTGPTQSMPLMQALIEQMDALPATEAQIKV 645 Query: 353 IIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMF 412 +E D L +Q N G A G D + + + Sbjct: 646 FTIENGDATALAETLQNLFGQQQQGGGQNQGQFGLQTATGAGDS------SLVPLRFSVD 699 Query: 413 SAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVT---LDNKLASFNVGQDVPVLSG 469 + N + A GD V+ L ++ DI + T L N A+ +L+ Sbjct: 700 TRTNSIVASGTTGDLNVVYQILVRLDEGDIRQ--RVTTVYRLRNSPAADVATAINELLTN 757 Query: 470 SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVL 504 + S N T + + ++ V P++ ++ Sbjct: 758 QRDLSQQNAELTTQFEQFEREVIVVPEIVSNSLIV 792 Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 93/213 (43%), Gaps = 11/213 (5%) Query: 156 VVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK---QQIIHLEYASAEDLAEILNQL 212 + E +V+++ G+ + + +++++I ++ E +I L+ L++++ + Sbjct: 332 IEFLEGLDVMVVRGKKADVERVLKIIDEIERQSEETKPVVEIYTLKNVDGRALSDLVATI 391 Query: 213 ISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYY 272 + Q ++ + N+L++ G +A + LL+ LD S E +V+ Sbjct: 392 YDQVFSARQSRVTITPLVKP----NALMLIGRAEAIPPVVELLQKLDQTVSPESQLKVFR 447 Query: 273 LKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQE 332 LK+ + + V D G P + + I A+ +TNSL++ A Q Sbjct: 448 LKFMSSID---AERTVRNFFVDRPGFGTDPRTGLGTRVLTI-AEYRTNSLIVQASQRDLL 503 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 ++ ++ LD+ ++ E I ++++ L Sbjct: 504 EVQKLLDTLDVAASESANEVRIFKLKNAVAEEL 536 Score = 41.9 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 29/166 (17%) Query: 219 KSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE----------------- 261 ++ + ++ AD RT +++ P +++ + L Sbjct: 75 QADYRSRSDVRVAADPRTRQIVLVAPTDVHKQVERWVADLPATIRLTQQQASENGLTTRI 134 Query: 262 --------ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS----SGAMD 309 +S G Y L+ A++ ++LT + + ++ S S + Sbjct: 135 TPLPQESVDSSMGELVSYRLRNTGASDFEQLLTRLGARRVVTTASSTNSSEYELRSPKLP 194 Query: 310 NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 V + D + + ++A + ++ LD R V +A +V Sbjct: 195 PVRLKVDRRAGEVQVSAPKGQGRAWEKLLGVLDWPRDLVRDQAAVV 240 >UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Comamonadaceae RepID=A1TKM7_ACIAC Length = 810 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 165/615 (26%), Positives = 260/615 (42%), Gaps = 72/615 (11%) Query: 71 SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIV 130 + ++ + N L + A+ I + ++ ++ Sbjct: 159 NAANLVPVLRPLISPNNTINVNPGNNSLVITDYADNLQRIARIVAAMDVSNASDV--EVI 216 Query: 131 PLENVPARDLAPLLRQMM------------------------DAGSVGNVVHYEPSNVLI 166 PL N A +LAPL+ +++ D ++ SN LI Sbjct: 217 PLRNAVASELAPLVSRLVEGTGSTPGMATTATGTAGAIPGQSDTAYRTTLLPEPRSNSLI 276 Query: 167 L-TGRASTINKLIEVIKRVDVI-------GTEKQQIIHLEYASAEDLAEILNQLISESHG 218 + + + + ++ ++D + +++L+ A A LA L ++ S G Sbjct: 277 VRAANPARLALVRTLVDKLDQAPVVGSAAASGNIHVVYLKNADATKLATTLRAALAASMG 336 Query: 219 KSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKA 278 + +S+ + S S + S T Sbjct: 337 SNAGGGAVSSSG---------------PSSSGGGSGTGSTGLSGSGLMQTGSSGGMGGGM 381 Query: 279 TNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVI 338 S N+ +PS+ G I AD TNSL+I+A + +L VI Sbjct: 382 GGSSSAGGLGSSAGSLNSANSNQPSTGG-----QIQADPSTNSLIISAPEPQFRQLRAVI 436 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN----------KNVGAQQFTNTGLPIFN 388 +LD RRAQVLVE++IVEV + G+QW +G + G I N Sbjct: 437 DQLDGRRAQVLVESLIVEVAANKVADFGIQWQGVMGNYGNGTIGVIGTNSTASGGANILN 496 Query: 389 AAQGVADYKKNGGITSANPAWD-MFSAYNGMAAGFFNGD--WGVLLTALASNNKNDILAT 445 A A +G ++ + + + N A NG+ G L L + ++L+T Sbjct: 497 LALAAASGSVSGVTSALSASGARPGNGLNVAIAPRINGNYYLGALANFLENTGDANVLST 556 Query: 446 PSIVTLDNKLASFNVGQDVPVLSGSQTTSGD----NVFNTVERKTVGTKLKVTPQVNEGD 501 P+++TLDN+ A +G +VP ++GS S N F TVERK VG L+V PQ++E Sbjct: 557 PNLLTLDNEEAQIIIGNNVPFVTGSYANSTGSSTVNPFTTVERKDVGLMLRVRPQISENG 616 Query: 502 AVLLEIEQEVSSV-DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 V L + QEVS V D ++N+ GPT + R+I++ VLV G +VLGGLL+D KV Sbjct: 617 TVKLSLYQEVSQVNDGTANAVNGPTTSKRSIESTVLVNDGSVIVLGGLLEDRYSMGQDKV 676 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRID 620 PL+GD+P+VG LFR + R K NLMVF+RP +IRD +L ++Y R QQ Sbjct: 677 PLMGDLPVVGGLFRNENRRRQKTNLMVFLRPVVIRDTATSDALMMDRYEAIRALQQNIQP 736 Query: 621 GKSKALVGSEDLPVL 635 S + + PVL Sbjct: 737 APSTVMRAVSEAPVL 751 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 28/293 (9%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 A + E NF ADI + G+ +++DP V+G +++ + Sbjct: 33 TATGAAPSSVRPGEPVTLNFAGADIEAVARTMATITGRNVVVDPRVKGQLTLVTERAVPP 92 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIA----DSSRPGVGDELVTR 128 +Q FL+ L L G++V+ G KVV A+ K G + S G ++VT+ Sbjct: 93 AAAFQQFLAALRLQGFTVVESA-GLYKVVPEADAKLQSGSVTVTQGGSGSAPGGGQIVTQ 151 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 I L A +L P+LR ++ + NV +N L++T A + ++ ++ +DV Sbjct: 152 IFKLNFENAANLVPVLRPLISPNNTINV--NPGNNSLVITDYADNLQRIARIVAAMDVSN 209 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGK---------------SQMPALLSAKIVAD 233 ++I L A A +LA ++++L+ + Q ++ + Sbjct: 210 ASDVEVIPLRNAVASELAPLVSRLVEGTGSTPGMATTATGTAGAIPGQSDTAYRTTLLPE 269 Query: 234 KRTNSLIISGPEKAR-QRITSLLKSLDVEE-----SEEGNTRVYYLKYAKATN 280 R+NSLI+ AR + +L+ LD + GN V YLK A AT Sbjct: 270 PRSNSLIVRAANPARLALVRTLVDKLDQAPVVGSAAASGNIHVVYLKNADATK 322 >UniRef50_Q0BR89 General secretion pathway protein D n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BR89_GRABC Length = 779 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 140/696 (20%), Positives = 251/696 (36%), Gaps = 102/696 (14%) Query: 20 AGHAENEQYGANFNNADIRQF-VEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A NF + DIR +I+G L IDPSV GT + ++ S Sbjct: 91 MAEAGGNNITLNFTDTDIRDVSAQILGGLLKVNYTIDPSVHGTATFHTSQPLSATALLPT 150 Query: 79 FLSILDLYGYSVITL----------------------------DNGFLKVVRSANVKTSP 110 +L+ G +V+ + +R A+ + Sbjct: 151 LQVLLNQNGAAVVQTEGLYRVLPIGAAAGITASAGQNGEAILNGGATIVPLRYASAEQLA 210 Query: 111 GMIADSSRPGV--------------GDELVTRI--------------------VPLENVP 136 + ++ G GD + P + Sbjct: 211 KTLQPYAQNGAKIAADAGRNAVLVSGDPQAREVMIGLIQAFDVDMLAGQSFALFPADAGG 270 Query: 137 ARDLAPLLRQMMDAGSVG------NVVHYEPSNVLILTGRA----STINKLIEVIKRVDV 186 A++ A L+ + G ++ + N ++ R+ + ++ ++ + Sbjct: 271 AKEYAQALQTAASSQQGGALAGVVRILPMDRINAVLAVARSARQIEDLRRIDTMVGQRRR 330 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 T + +L+ + D+A +L Q + +Q + + Sbjct: 331 QSTRSWHVYYLQNGRSNDVAYVLQQAFTPGRVTAQPTPRNTTRPAGQS-------QSSAA 383 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 S + + + +G S L A S+ Sbjct: 384 QGGAGGINGGMTGGTSSMTPGGNGGLPQAGNTGDASQPQSGSSNPLLGSLTGAGGGSAGN 443 Query: 307 AMD------NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 D + I + Q N+++I A +S + T++ ++DI QV ++AII EV Sbjct: 444 MDDAGTDPNTLRIVPNTQNNAVLIFATESEYGPIETMLRKIDILPLQVRIDAIIAEVALN 503 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 + L G Q+ + G + AA A G + +A P + G ++ Sbjct: 504 DTLRYGTQFFFREGGLNS------AMQTAAATAATASTGGLLAAAIPGFSNGFLLTGSSS 557 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ--TTSGDNV 478 + +T L S K +L++P ++ LDN+ A VG VP L+ T + Sbjct: 558 S------QLAMTLLQSVTKVQVLSSPELMVLDNEPARLQVGALVPYLTAQSQATIGQSAI 611 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL--GPTFNTRTIQNAVL 536 N V + G L VTP+VN V L+I QEVS VD+S N+ P F R++Q+ V+ Sbjct: 612 INAVSYQQTGVILNVTPRVNNSGLVTLDISQEVSDVDTSINTNGISSPAFQQRSVQSRVV 671 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 V+ G+TV L GL+ D + VP L D+P++G +F + R++ L++ + P +I D Sbjct: 672 VQDGQTVGLAGLIRDNNSRANGGVPFLKDVPVLGSVFGQQNNNRSRTELLILVTPHVIHD 731 Query: 597 DDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 R+L+++ R + GS D Sbjct: 732 QRDARALTEDLRQNLRDAALVPQELNHLRPTGSADP 767 >UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Comamonadaceae RepID=A1TUQ3_ACIAC Length = 829 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 138/517 (26%), Positives = 222/517 (42%), Gaps = 37/517 (7%) Query: 152 SVGNVVHYEPSN-VLILTGRASTINKLIEVIKRVDVIGTEKQQ----IIHLEYASAEDLA 206 ++ E N +L++T RA+ +++ I+++D + I H++ +A+ LA Sbjct: 327 GALRIMPIERINSILVVTPRAAYLDEARRWIEKLDQPSDNGAEPQLFIYHVQNGNAKHLA 386 Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG-----------PEKARQRITSLL 255 +L+ + G S + + A + +NS SG Sbjct: 387 GVLSGIFGGQAGGSVANSGV-APGLGGTSSNSYGSSGFGNSSFNNGFGSSGFGNSPFGGG 445 Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITA 315 G ++ + + + ++ + S + V + A Sbjct: 446 FGSSGGFGSSGGFGSSGGFGGGFSSGSGFGSFQGNRGNQNQAGTQQGAVSANLGGVRLMA 505 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 DE NS+++ ++ K+ + RLD+ QVL+EA IVEV + L G+QWA N G Sbjct: 506 DELNNSVLVWGTKANYMKIEATLKRLDLPPTQVLIEASIVEVTLDDTLQYGLQWAFNNAG 565 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 G + N G + P FS A G V+L ALA Sbjct: 566 PSNLNGAGQLLTNGPSDKTPI----GSSIPTPTSSGFS----YALSNSLGSVRVVLNALA 617 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS---GDNVFNTVERKTVGTKLK 492 + ++++PS++ LDN A +VG PV +GS TS G++V +T++ + G L Sbjct: 618 TKRLLKVISSPSLMVLDNHTAMMSVGNQQPVKTGSLITSVSGGNSVADTIQYRDTGVSLA 677 Query: 493 VTPQVNEGDAVLLEIEQEVSSV--DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 VTP VN G+ V ++I+Q V+ D+S + +L P F R I + V V++GE +VLGGL+ Sbjct: 678 VTPSVNAGNLVTMQIDQAVTDAVADNSGSISLQPVFQQRQITSKVAVRSGEAIVLGGLIR 737 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 D S S VPLL DIPLVG LF + L+V I P ++R D R +S E R Sbjct: 738 DTSNSSKSGVPLLQDIPLVGSLFSNNGKTGNRTELLVVITPKVVRTDIDIREVSDELRDR 797 Query: 611 YRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAP 647 + Q L + P T + P P Sbjct: 798 LKGLQI-------IELKENGRTPAAPSGTSTTIQPLP 827 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 115/327 (35%), Gaps = 45/327 (13%) Query: 25 NEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 +F A + + V V G ++ P + GT+++ + + + S L Sbjct: 94 GAPMTFSFEEAPVAEVVRTVLGDIAKANYVLHPPLNGTVTLATRNPIPPDQAMFLLESAL 153 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMI---ADSSRPGVGDELVTRIVPLENVPARDL 140 G +I G V R ++ G + G+ V I+PL+ + A ++ Sbjct: 154 QANGLGMIRDARGTYHVGRPDALRAIGGTLRQFRSGEPLPPGNGAV--IIPLQYIGAAEM 211 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQIIHLE 198 A +LR M+ ++ V NVL+++G + ++++ DV + L+ Sbjct: 212 ASILRPMVTPDAI--VRVDNLRNVLVMSGTRTQAEAWMDLVNTFDVDLLKGMSVGVFPLK 269 Query: 199 YASAEDLAEILN------------------------------QLISESHGKSQMPALLSA 228 YAS +++ L + P + Sbjct: 270 YASVKEVEAALRVVSGGGGSAPGAVPGTPAGAAAAAAAGANQANAAPVTLGEGNPLFGAL 329 Query: 229 KIVADKRTNSLIISGPEKA-RQRITSLLKSLDVE--ESEEGNTRVYYLKYAKATNLVEVL 285 +I+ +R NS+++ P A ++ LD E +Y+++ A +L VL Sbjct: 330 RIMPIERINSILVVTPRAAYLDEARRWIEKLDQPSDNGAEPQLFIYHVQNGNAKHLAGVL 389 Query: 286 TGV--SEKLKDEKGNARKPSSSGAMDN 310 +G+ + + P G N Sbjct: 390 SGIFGGQAGGSVANSGVAPGLGGTSSN 416 Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 100/320 (31%), Gaps = 52/320 (16%) Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV----IGTE 190 +P LL + A +G + + + GR + + +++ Sbjct: 140 IPPDQAMFLLESALQANGLGMIRDARGTYHV---GRPDALRAIGGTLRQFRSGEPLPPGN 196 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 II L+Y A ++A IL +++ A + D N L++SG + Sbjct: 197 GAVIIPLQYIGAAEMASILRPMVTP-----------DAIVRVDNLRNVLVMSGTRTQAEA 245 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT-----------------------G 287 L+ + DV+ + + V+ LKYA + L Sbjct: 246 WMDLVNTFDVDLLKGMSVGVFPLKYASVKEVEAALRVVSGGGGSAPGAVPGTPAGAAAAA 305 Query: 288 VSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQ-EKLATVIARLDIR-- 344 + + + + I E+ NS+++ ++ ++ I +LD Sbjct: 306 AAGANQANAAPVTLGEGNPLFGALRIMPIERINSILVVTPRAAYLDEARRWIEKLDQPSD 365 Query: 345 ---RAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 Q+ I VQ+GN +L + G Q + G G Sbjct: 366 NGAEPQLF----IYHVQNGNAKHL-AGVLSGIFGGQAGGSVANSGVAPGLGGTSSNSYGS 420 Query: 402 ITSANPAWDMFSAYNGMAAG 421 N +++ +G Sbjct: 421 SGFGNSSFNNGFGSSGFGNS 440 >UniRef50_C0AE16 Type II and III secretion system protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AE16_9BACT Length = 809 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 129/669 (19%), Positives = 265/669 (39%), Gaps = 80/669 (11%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSV-QGTISVRSNDTFSQQEYYQF 78 A A++ + ++ Q +E++ + G+++L ++ T ++ S+ E Sbjct: 62 APAADDMIPELIMRDMELSQALELLERLTGRSVLRPGALPANTYTLTIKKPISKAEAVVA 121 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG--VGDELVTRIVPLENVP 136 ++ + +++ L + FLKVV SA + + S G + ++ L+ + Sbjct: 122 LETLFGMNQIAIVPLGDKFLKVVPSAMARNEAPEFIEGSTLGMSPSSRIAAKLFHLDFLR 181 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD--VIGTEKQQI 194 ++A L +++ + +E SN +++T + + ++ V+K VD V + Sbjct: 182 VSEIAQQLPLLINQTLANQPMAFEKSNSILITDTITILQRIEAVLKEVDRPVASHFTTKT 241 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 LE+A A D+ + I+ Q + AD RTN +I+ + ++ Sbjct: 242 YTLEFAKASDVVTKIKSFITAEL---QKDFSANTTYTADDRTNQIILISHPAEQNFFDNI 298 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATN----LVEVLTGVSEKLKDEKGN------------ 298 + LD+ + V +LK+AKA + L ++++G + + G Sbjct: 299 ITKLDIRADPNTRSEVIFLKHAKAPDVNTILTQLISGQNNATRTTTGGQQGAAATTNRAA 358 Query: 299 ---------------------------------ARKPSSSGAMDNVAITADEQTNSLVIT 325 + +S + + ADE++NS++I+ Sbjct: 359 TTTANRTATANQQQRTAQNTQASRNTAVASALSNQGAASEQFSTLLTVVADERSNSIIIS 418 Query: 326 ADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLP 385 +I ++D+ AQV +E +I EV + G+ GL Sbjct: 419 GTADDIRLTRELIDKIDVLLAQVRIEVVIAEVSLSDEATSGID------------TLGLR 466 Query: 386 IFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILAT 445 I N GG + F A + L+ N +IL+ Sbjct: 467 IENGVLTGFAASGPGGKIAGIDNGTFFQTAKENALAGV-----ISLSTTPRKNNTNILSV 521 Query: 446 PSIVTLDNKLASFNVGQDVPVL-SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVL 504 P+IVT N+ A +G+ P++ + T+ + + + ++ +G L VTP + +V Sbjct: 522 PTIVTSHNQEAEVFIGEKRPIITGTTTTSDSLSTSSQITQQQIGITLTVTPLIGPNGSVQ 581 Query: 505 LEIEQEVSSVDS--SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPL 562 +++EQ+V + + + P R ++ + ++G+ VVLGG+ S+ Sbjct: 582 MQLEQKVEDISGFVTIDGNEQPITTDRNAKSFLSARSGDIVVLGGMQRTKKGNTTSR--- 638 Query: 563 LGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGK 622 LG IP +G LF S + ++ FIRPT++ + + + ++ R + R Sbjct: 639 LGPIPWIGDLFGKRSKTDQRTEILFFIRPTVLTNTQLDNVEAYQQVDRAPHAAEIRKVLD 698 Query: 623 SKALVGSED 631 ++ L S D Sbjct: 699 TRPLAASTD 707 >UniRef50_B8IR79 General secretion pathway protein D n=2 Tax=Methylobacterium RepID=B8IR79_METNO Length = 784 Score = 295 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 147/695 (21%), Positives = 254/695 (36%), Gaps = 105/695 (15%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 L G Y NF ADI+ + V + LG + + + G I++ S ++ E Sbjct: 92 LEVGNGPGGEGSYRLNFERADIKDVLRTVLTETLGLSYSLGADISGQITISSPRPLTRAE 151 Query: 75 YYQFFLSILDL---------------------------------YGYSVIT--------- 92 S+L YG SV+ Sbjct: 152 MLGAIESVLASQGLALTRNGAGYLIAPTALGAGSVNFGAGAQAGYGVSVVPLRYVSAAVM 211 Query: 93 ----------LDNGFLKVVRSANVKTSPGMIADSSRPGVGD-------ELVTRIVPLENV 135 D + R+ V PG + + + L V Sbjct: 212 SRLVSGFVTEADGVRFDISRNTIVLKGPGPKRQEAVSAILSLDADWMRGQSVSLFELRRV 271 Query: 136 PARDLAPLLRQMMDAGSVGN---VVHYEP----SNVLILTGRASTINKLIEVIKRVDV-- 186 + L Q+ D G G ++ ++P VL+L+ + I + I+++D Sbjct: 272 RPEAVVAELAQLFDTGENGAGSGLIQFKPVSRMRAVLVLSKNPTLIRRAETFIRKLDTMS 331 Query: 187 -IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPE 245 E + Y A +LA ++N L G ++ G Sbjct: 332 EAAEENVFVYKARYRDARELARVVNGLFGNGQGGVGPAGPAGTGFAQNRAGAGSGAGGGL 391 Query: 246 KARQRITSLLKS---------------LDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE 290 L L + G L+ A+ + + Sbjct: 392 GGHGLSGGGLGGSGFGGGGLSAPGGSSLGAPGQQPGGNGTDLLRARFASAFGDAVPAAPA 451 Query: 291 KLKDEKGNAR----KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 N+ VAI+AD NS++ AD +K+ + RLD A Sbjct: 452 DAPGAGTNSAMIDLTTQPGARGRGVAISADPANNSVITYADGDTYKKVYAALRRLDATPA 511 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QV V I EV+ + L GVQ+ + + GL + G+ G Sbjct: 512 QVAVNVTIAEVRLNDQLKYGVQYFLDS------SRIGLGKNKGSFGLVSAAATGATNVLK 565 Query: 407 PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 P + +N + G+ D V+++AL +L++PS+V L+N+ A+ VG VP+ Sbjct: 566 PG----AGFNFLVGGYSGPD--VVISALDGFTDVKVLSSPSLVVLENQPATLQVGDSVPI 619 Query: 467 LSGSQTT---SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG 523 + + + + N VE + G L V P++ + DAV ++IEQE+S+V S+ TL Sbjct: 620 TTRQAQSIDYANAPLINQVEFRDTGIILNVIPRIGQNDAVTMQIEQEISAVVGGSD-TLT 678 Query: 524 PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKR 583 PT + R + + + V G+TV+L GL+ D + + +P L +P +GQLF T + Sbjct: 679 PTISKRRVASTISVANGQTVLLAGLISDKHQRERDGIPFLNRLPQIGQLFSSTDNGAERT 738 Query: 584 NLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQR 618 L+VFIRP ++R+ + ++++ + +R Sbjct: 739 ELVVFIRPVVVRNGRDAQRVAEDYRGQLLDAGVRR 773 >UniRef50_A6CD16 General secretion pathway protein D (Precursor) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CD16_9PLAN Length = 1307 Score = 295 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 131/558 (23%), Positives = 232/558 (41%), Gaps = 64/558 (11%) Query: 155 NVVHYEPSNVLILTGRASTINKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAEILNQL 212 V+ +N L++T ++ + +I + D V + ++ L+ A AE + +L Sbjct: 701 RVIADPRANTLVVTAPKDSLELIGALINQFDARVSSVAELKVFTLKNADAESMVTLLQST 760 Query: 213 ISESHGKSQMP-----------ALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 S + ++ + L+ K D+RTNS++ G A Q + ++L LD Sbjct: 761 FSADNQQTDLGIQIAGVNDANSNLIPLKFSVDRRTNSVVAQGGADALQIVEAILLKLDGA 820 Query: 262 ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA--MDNVAITADEQT 319 +S + T V LK ++ + + + SS V + + Sbjct: 821 DSRKRETTVIQLKNTPVADVSVAINEFLDTQRALIAQDPDLISSFELLEREVIVVPEAIN 880 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN------ 373 N+L+I+A E+++ ++ +LD QV+++A+IVEV+ N GV+ ++ Sbjct: 881 NNLIISATPRYFEQISNLVKQLDKEAPQVIIQALIVEVELDNDDEFGVELGLQDSLLFNR 940 Query: 374 -------------VGAQQFTNTGLPI----------FNAAQGVADYKKNGGITSANPAWD 410 G T T I FN+ + N +A A Sbjct: 941 SIIDNVLTVQQTITGQNNVTQTNQTIVSQEATPGFLFNSINPLGTNNTNNVSNTAGQALS 1000 Query: 411 MFS--------AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 FS + G+ + +L+ ALA+ +L+ P I T+DN A VGQ Sbjct: 1001 NFSLQRGNSDLGFGGLVLSASSESVSILIRALAAKRNVHVLSRPQIRTVDNVTAQIQVGQ 1060 Query: 463 DVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS---- 518 VPV++G T+ + +++ G L VTP+++ +++E + E S + SS Sbjct: 1061 IVPVVNGVSVTAVGSANPVIQQSEAGIILTVTPRISPDGNIVMETQAEKSDFNGSSVPIF 1120 Query: 519 ------NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 N P N +Q V V G+TVVLGG++ + KVP LGDIPL+G Sbjct: 1121 TDATTGNVVESPIKNITQVQTTVSVPNGQTVVLGGMITESDTTIERKVPWLGDIPLIGIP 1180 Query: 573 FRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSK-ALVGSED 631 FRY + ++ L+VF+ P IIR+D + + + R + ++ V + Sbjct: 1181 FRYDYSSTRRKELLVFLTPRIIRNDADSEFIKQVESERIHLQVEKAEQMHGPIFAVPPGE 1240 Query: 632 LPVLDENTFNSHAPAPSS 649 + E P P++ Sbjct: 1241 PEFIPEGE-GLLEPIPTT 1257 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 59/382 (15%), Positives = 137/382 (35%), Gaps = 56/382 (14%) Query: 67 NDTFSQQEYYQFFLSILDLY-GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL 125 +Q L L + + + +V +I + + G Sbjct: 411 PAEVEKQRSLPELLQDLSGNVNIESVPDLGVLILRGKDEDVNALMKIIKELEKLSEGTRP 470 Query: 126 VTRIVPLENVPARDLAPLL----------RQMMDAGSVGNVVHYEPSNVLILTGRASTIN 175 ++ L +V + LA LL R + ++ N L++ + + Sbjct: 471 DIHLLNLRHVNSTALAELLNGVYEDLVTLRAIQGQIQKIKIIPLVKPNALLILAPDTDMP 530 Query: 176 KLIEVIKRVDVIGT--EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVAD 233 ++++ + +D + + L+ ASA +A + + +E G + + Sbjct: 531 SILKLAEELDQPVNPLTEFGVFQLKSASASQVATTIREFYNERGGLGT-----RILVSPN 585 Query: 234 KRTNSLIISGPEKARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGVSEK- 291 RTNS+I+ + Q + +L++ +D+++S+ +++ LK A A +L E L + Sbjct: 586 IRTNSIIVQAQPRDMQEVAALIQKIDLDQSQAISRVKIFPLKNAIAADLAETLNSTLQSV 645 Query: 292 -----------------------------------LKDEKGNARKPSSSGAMDNVAITAD 316 ++G + SG + ++ + AD Sbjct: 646 LNPAAAQTAGLGTNIGGAGGEAAQQLQEARSVVLEFLSQEGTQSRVLRSGLLADIRVIAD 705 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA 376 + N+LV+TA + E + +I + D R + V E + +++ + ++ + Sbjct: 706 PRANTLVVTAPKDSLELIGALINQFDARVSSVA-ELKVFTLKNADAESMVTLLQSTFSAD 764 Query: 377 QQFTNTGLPIFNAAQGVADYKK 398 Q T+ G+ I ++ Sbjct: 765 NQQTDLGIQIAGVNDANSNLIP 786 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 133/357 (37%), Gaps = 34/357 (9%) Query: 99 KVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVH 158 +V + A + PG + +P D+ P E R L LL+ + N+ Sbjct: 385 RVDQIAYQEQQPGAAQNPQQPQPADK------PAEVEKQRSLPELLQDL---SGNVNIES 435 Query: 159 YEPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQQIIHLEYASAEDLAEILNQLISE 215 VLIL G+ +N L+++IK ++ + +++L + ++ LAE+LN + + Sbjct: 436 VPDLGVLILRGKDEDVNALMKIIKELEKLSEGTRPDIHLLNLRHVNSTALAELLNGVYED 495 Query: 216 S-HGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLK 274 ++ + KI+ + N+L+I P+ I L + LD + V+ LK Sbjct: 496 LVTLRAIQGQIQKIKIIPLVKPNALLILAPDTDMPSILKLAEELDQPVNPLTEFGVFQLK 555 Query: 275 YAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKL 334 A A+ + + + G + ++ + +TNS+++ A +++ Sbjct: 556 SASASQVATTIREFYNER------------GGLGTRILVSPNIRTNSIIVQAQPRDMQEV 603 Query: 335 ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVA 394 A +I ++D+ ++Q + I +++ +L + G A Sbjct: 604 AALIQKIDLDQSQAISRVKIFPLKNAIAADLAETLNSTLQSVLNPAAAQTAGLGTNIGGA 663 Query: 395 DYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTL 451 + + A F + G + ++A P TL Sbjct: 664 GGEAAQQLQEARSVVLEFLSQEGTQSRVLRSGLLA---------DIRVIADPRANTL 711 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 120/304 (39%), Gaps = 55/304 (18%) Query: 93 LDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA-- 150 N L + ++ + + + +P V + L++ A +A +R+ + Sbjct: 516 KPNALLILAPDTDMPSILKLAEELDQP-VNPLTEFGVFQLKSASASQVATTIREFYNERG 574 Query: 151 --GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQQIIHLEYASAEDL 205 G+ V +N +I+ + + ++ +I+++D+ ++ + +I L+ A A DL Sbjct: 575 GLGTRILVSPNIRTNSIIVQAQPRDMQEVAALIQKIDLDQSQAISRVKIFPLKNAIAADL 634 Query: 206 AEILN----------------------------------------QLISESHGKSQM--- 222 AE LN + +S+ +S++ Sbjct: 635 AETLNSTLQSVLNPAAAQTAGLGTNIGGAGGEAAQQLQEARSVVLEFLSQEGTQSRVLRS 694 Query: 223 PALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 L +++AD R N+L+++ P+ + + I +L+ D S +V+ LK A A ++V Sbjct: 695 GLLADIRVIADPRANTLVVTAPKDSLELIGALINQFDARVSSVAELKVFTLKNADAESMV 754 Query: 283 EVLTGVSEKLKDEK----GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVI 338 +L + A ++ + + + D +TNS+V + + ++ Sbjct: 755 TLLQSTFSADNQQTDLGIQIAGVNDANSNLIPLKFSVDRRTNSVVAQGGADALQIVEAIL 814 Query: 339 ARLD 342 +LD Sbjct: 815 LKLD 818 Score = 41.9 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 104/304 (34%), Gaps = 26/304 (8%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 ++ + N A + ++ V + T+++D +G S + E +Q Sbjct: 74 ASDVAEISLNHVQATWAKVLKQVAEQSELTLVMDVVPKGFFSRIDKRPHTLSETFQILNR 133 Query: 82 ILDLYGYSVITLDNGFLKV-VRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDL 140 L+ G+ ++ D+ + + +R A K + + R G Sbjct: 134 ELEPKGFRLLQKDSFLIVLDLREAKAKYIRPTVQSADRTPEGTRPG-------------- 179 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYA 200 +RQ+ N P N + + K I++ + + Sbjct: 180 KNDIRQIEHLEQTEN-----PQNPVTQADVPARFEKSARKIQQKEATPQVATFTVQPRTL 234 Query: 201 SAEDLAEIL-NQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD 259 ++ ++ + + + + + P L +V + + SL+ E+ ++ + + +D Sbjct: 235 NSTEILRQFYHAFETRAELQGEGPNGLPGLVVFNSQEESLV---DEQTQEPLKIINTQID 291 Query: 260 VEES--EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADE 317 ++ N V+ +KA L + + K + + S + VA + Sbjct: 292 FRIGIDKQNNELVFEASPSKAQALKATALKLDQAAKGFSQSIQLVIGSPQIGQVAQKLHQ 351 Query: 318 QTNS 321 QTN+ Sbjct: 352 QTNT 355 >UniRef50_A9H699 General secretion pathway protein D n=3 Tax=cellular organisms RepID=A9H699_GLUDA Length = 772 Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 136/682 (19%), Positives = 258/682 (37%), Gaps = 87/682 (12%) Query: 25 NEQYGANFNNADIRQ-FVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 NF + D+R +I+ L IDP+V G +++ ++ + + IL Sbjct: 92 GGDIALNFADTDVRDAVSQIMTDILHVNYAIDPAVHGRVTLHTSQPLTAGQLLPALQIIL 151 Query: 84 --------DLYG-YSVITL--------------------DNGFLKVVRSANVKT------ 108 G Y ++ + +R A+ Sbjct: 152 AQVHAVLIQADGLYRIVPAQADSANPQSSAAGIAENASLGGSVMVPLRYADAANLAKALQ 211 Query: 109 -------------SPGMIADSSRPGVGDELVTRI---------------VPLENVPARDL 140 S + S P + LV I +P+E+ ARD+ Sbjct: 212 PFLQGGARVTPVDSANAVIVSGEPSARNTLVDVIHAFDVDWLSSQSYALLPVESGNARDM 271 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRA----STINKLIEVIKRVDVIGTEKQQIIH 196 A L+ + G++ V+ N +++ R+ +L +I+R + + Sbjct: 272 ATALQSALHGGNLVQVLPLARVNAVLVVARSARQIDDARRLFALIERNRRATMRSWHVFY 331 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 ++ +S D+ L Q + + P S ++ + Sbjct: 332 VQNSSVNDVTYTLQQAFTPGDVTATPPETTSGTASQLGQSGFTGTMANAMGGGGLGGSAG 391 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS-GAMDNVAITA 315 + + G+ + A + G + G +S+ G + I + Sbjct: 392 TGNTTGLMGGSQQGGVQATAGQAPTGQAGGGPAAFANPLLGGLDNTASAEGRPQAMRIIS 451 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 + Q N++++ + + ++ R+D+ QV ++A+I EVQ + L G Q+ K+ G Sbjct: 452 NSQHNAILVYGTDQESDTVEQMLRRIDVMPLQVRIDAVIAEVQLNDALQYGTQFFFKSGG 511 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 +T + A + + G G + AL Sbjct: 512 INGVLSTNSQTITTG-------------TLATAAFSHTLPGFIIGGASGGGAPFAIDALQ 558 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS-GDNVFNTVERKTVGTKLKVT 494 + +L++P ++ DN+ A VGQ VPV GSQ+++ G +++N + G ++VT Sbjct: 559 NVTTVHVLSSPQLMVQDNRAARLQVGQLVPVQIGSQSSTIGTSIYNQFTYQPTGVIMQVT 618 Query: 495 PQVNEGDAVLLEIEQEVSSVDSSSNSTLG----PTFNTRTIQNAVLVKTGETVVLGGLLD 550 P V+EG V L++ QEVSSV ++ ST PTFN R++ + V+V+ G+TV L GL+ Sbjct: 619 PHVSEGGLVTLDVSQEVSSVSPTAASTANAASNPTFNDRSVSSRVVVQDGQTVGLAGLIT 678 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 D S S +P L +IP++G L + R + L++ + P +I D L ++ Sbjct: 679 DSSSRINSGIPWLKNIPVLGVLAGNQNNNRQRTELLILMTPHVIHDQRDAVDLMEDLRDT 738 Query: 611 YRQEQQQRIDGKSKALVGSEDL 632 + + + + GS D Sbjct: 739 HPNAANVPDELRVMRMTGSADP 760 >UniRef50_B5YDZ7 Bacterial type II and III secretion system protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDZ7_DICT6 Length = 1256 Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 139/597 (23%), Positives = 245/597 (41%), Gaps = 69/597 (11%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 +++ L+ + + ADIR+ + +G+ +ID V G I + Sbjct: 718 AVVSRELLTVEREGDKIYVSCDLRGADIREVLRELGKKADINFVIDQKVTGQIDLY---- 773 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 ++ E + +I+ G IT ++ V P +A T+I Sbjct: 774 LNKVELPEVL-NIIQRAGKLSITTEDKVTYVKPYEEKVAVPVEVAK-----------TKI 821 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 L+ + D+ + ++ ++ + + + +LI G+ + L E+I R+DV Sbjct: 822 YALKYITLSDIERVGGSLVKN---LSLSYDDKTRLLIAQGKEDDLKVLDELISRIDVEKK 878 Query: 190 EKQ---QIIHLE------YASAEDLAEILNQLISESHGKSQMPALLSAKIVA--DKRTNS 238 E +++ +E Y S + + +++ E K+ + ++ K+ D N Sbjct: 879 EAVVSRELLTVEREGDKIYVSCDLRGADIREVLRELGKKADINFVIDQKVTGQIDLYLNK 938 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 + + I S + S+ E+ + AT + KLK + Sbjct: 939 VEL----PETLDILSKIASISFEKVGSVTFVKPFTTAVVATKEGAPIVTKEYKLKYISLD 994 Query: 299 ARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 K SG +V D+ + L++ + ++IA+LD QV ++ ++EV Sbjct: 995 TLKSVVSGIAKDVNFYYDQTSGLLLVQGPADQVSSVESMIAKLDKPTPQVKIDVQVIEVS 1054 Query: 359 DGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM 418 N ++G++W ++ +TGL I A G D + I+ NP Sbjct: 1055 RENIKDIGIEWGTGSI------STGLQI-TANVGWQDLR----ISIINP----------- 1092 Query: 419 AAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV 478 G + AL S NK ILA PS+ T+ K +G VP++S + Sbjct: 1093 ------GQISANIKALESQNKAKILAQPSMTTVSGKSTRIMIGDRVPLISYDAQGN---- 1142 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 V VG L VTP VN + + +VS++ P +TR Q V +K Sbjct: 1143 -RQVSFVDVGIILNVTPTVNADGTITANLNPQVSTIQGYVQDV--PIISTREAQTIVNLK 1199 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 GET+ LGGLL E +SKVPLLGDIP++G+LF+ ++ +R L++ I P II Sbjct: 1200 NGETLALGGLLRQEEIESMSKVPLLGDIPILGELFKARKIQKVERELIILITPKIIE 1256 Score = 91.6 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 135/348 (38%), Gaps = 34/348 (9%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 + A+ +DIR ++ + ++DP V GT+ + N E Sbjct: 569 GDVFYVTASLKKSDIRDVLQEIASKTDLNFIVDPKVSGTVDLFVNK-VPLDEVLTIIQ-- 625 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L + + + + + T P +I+ T++ L+ + +D+ Sbjct: 626 -RLANFDMEKVGKTYYIRPKEVQTATVPQVIS------------TKLYVLKYITLQDILR 672 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ---QIIHLE- 198 + ++ ++ + + + +LI G+ + L E+I R+DV E +++ +E Sbjct: 673 VGGSLVKN---LSLSYDDKTRLLIAQGKEDDLKVLDELISRIDVEKKEAVVSRELLTVER 729 Query: 199 -----YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 Y S + + +++ E K+ + ++ K+ T + + + + + Sbjct: 730 EGDKIYVSCDLRGADIREVLRELGKKADINFVIDQKV-----TGQIDLYLNKVELPEVLN 784 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNL-VEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 +++ + Y Y + + VEV LK + + + N++ Sbjct: 785 IIQRAGKLSITTEDKVTYVKPYEEKVAVPVEVAKTKIYALKYITLSDIERVGGSLVKNLS 844 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 ++ D++T L+ + + L +I+R+D+ + + +V ++ V+ Sbjct: 845 LSYDDKTRLLIAQGKEDDLKVLDELISRIDVEKKEAVVSRELLTVERE 892 Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 61/166 (36%), Gaps = 19/166 (11%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ +F+ A+IR ++ +GQ G I+ D VQG ISV ++ F ++L Sbjct: 309 QQRISVSFDRAEIRDVLKAMGQLAGLNIITDIGVQGRISVYL-KDIPFKDA---FYALLA 364 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 I + D + +LVT++ L+ ++ +L Sbjct: 365 SSDLGYIQQGEIII------------VANLDKLQKIESRDLVTKVYQLKYFESQKAKDIL 412 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 + + N LI++ S K+ IK +D+ Sbjct: 413 SKTSKTAVF---DSDDSRNWLIVSAPPSEFAKIESTIKTLDIPSES 455 >UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZY4_CHRSD Length = 668 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 99/379 (26%), Positives = 167/379 (44%), Gaps = 21/379 (5%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 +L + +A +R +I+ P E A+ +L E+ T ++YAKAT+L Sbjct: 309 ILQSHGLASRRNGDVIVVAPVDELAQMERQTLENRAQSEQLAPLVTDYVQVRYAKATDLA 368 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 +L G + +T DE+TN+L++ + + ++ RLD Sbjct: 369 AMLRG-------------SEGFGLLSERGRVTVDERTNTLLVRDTREQLASIRGMLERLD 415 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGI 402 + QV +EA IV +D LGV W F + G+ + + G+ Sbjct: 416 VPVRQVQIEARIVIARDTASRELGVNWGISQRQGVTFDDDGVGSVVDRNPSGANRGSAGL 475 Query: 403 TSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 + D + + + L AL S K+ ++ P ++T + K A GQ Sbjct: 476 SVDLGDSDGSGSTFSFGYLSGDVLLDLELRALESEGKSQTISQPKVITANQKTAVIKQGQ 535 Query: 463 DVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL 522 ++P + + + + VE K L+ TPQ+ ++++++ +V + ++ Sbjct: 536 EIPYQESTSSGATN-----VEFKEAVLSLEATPQITPDGSIVMDLLINNDTV-ADNSYDG 589 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 P +T +I+ VLV G TVVLGG+L + K P LGD+PL+G LFRYT K Sbjct: 590 APAIDTNSIETQVLVDDGATVVLGGILTSEQLRNLYKTPFLGDLPLIGSLFRYTQESNEK 649 Query: 583 RNLMVFIRPTIIRDDDVYR 601 L++FI PTII D R Sbjct: 650 VELLIFITPTIIGDGQANR 668 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 96/303 (31%), Gaps = 19/303 (6%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E NF N +R+ + ++ G I+ SVQG++++ + IL Sbjct: 256 GEPISLNFQNIQVREVLSVLSDFSGLNIVASDSVQGSVTLNLQQ-VPWDQALAL---ILQ 311 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 +G + + + + + + ++ LVT V + A DLA +L Sbjct: 312 SHGLASRRNGDVIVVAPVDELAQMERQTLENRAQSEQLAPLVTDYVQVRYAKATDLAAML 371 Query: 145 R---QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 R G V E +N L++ + + +++R+D + + Sbjct: 372 RGSEGFGLLSERGRVTVDERTNTLLVRDTREQLASIRGMLERLD---------VPVRQVQ 422 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 E I S G + + D S++ P A + L L Sbjct: 423 IEARIVIARDTASRELGVNWGISQRQGVTFDDDGVGSVVDRNPSGANRGSAGLSVDLGDS 482 Query: 262 ESEEGNTRVYYLKYAKATNL---VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQ 318 + YL +L G S+ + K ++ I E Sbjct: 483 DGSGSTFSFGYLSGDVLLDLELRALESEGKSQTISQPKVITANQKTAVIKQGQEIPYQES 542 Query: 319 TNS 321 T+S Sbjct: 543 TSS 545 >UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7W7_KANKD Length = 701 Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats. Identities = 110/428 (25%), Positives = 196/428 (45%), Gaps = 56/428 (13%) Query: 178 IEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTN 237 I ++ DV G+ ++++ + A D+ L +K + ++ Sbjct: 315 INIVISDDVQGSMALNLVNVPWDQALDII-------------------LKSKGLGKRQEG 355 Query: 238 SLIISGPEK--ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE 295 ++++ P A++ L + EE T + + YAKA + +L + Sbjct: 356 NVMMIAPADIIAQREQQELEANKQQEELAPLRTELIQVNYAKAAEIAAILQAGLGGGSGD 415 Query: 296 KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 + S G ++T D++TN++++ + E + ++A+LDI QVL+EA IV Sbjct: 416 GKSVGILSERG-----SVTTDQRTNTILVQDVSTKIEDVRRLVAQLDIPVRQVLIEARIV 470 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 DG +LG ++ +V G + N + ANPA + ++ Sbjct: 471 TADDGFARDLGSRFGVSDV--------------MNSGEVNGDFNVNLPIANPAGSLGLSF 516 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG 475 + G + L+AL S N+ +++A+P ++T + K A G+++P L G+ + + Sbjct: 517 ARLQDGIV---VDMELSALESENRGEVVASPKVITANQKEAFIKAGEEIPYLQGASSGAA 573 Query: 476 DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS--------SNSTLGPTFN 527 + V+ K +LKVTPQ+ V+L++ + + S+ P N Sbjct: 574 N-----VQFKEAVLELKVTPQITPDGRVILDLAITQDTRGENVIFTSPDGGGSSGAPAIN 628 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 T+ I VLV GET+VLGG+ + SKVPLLGDIPL+G LF+ T E K+ L++ Sbjct: 629 TQEIGTQVLVDNGETIVLGGIFQHRTTYDESKVPLLGDIPLLGWLFKNTQREDTKQELLI 688 Query: 588 FIRPTIIR 595 F+ P II Sbjct: 689 FVTPKIIE 696 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 76/218 (34%), Gaps = 18/218 (8%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E F + D++ + +G G I+I VQG++++ + + IL Sbjct: 290 GETLTLQFQDMDLKAILHTLGDFAGINIVISDDVQGSMALNLVN-VPWDQALDI---ILK 345 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G N + + + + + L T ++ + A ++A +L Sbjct: 346 SKGLGKRQEGNVMMIAPADIIAQREQQELEANKQQEELAPLRTELIQVNYAKAAEIAAIL 405 Query: 145 RQMMDA-----------GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ 193 + + G+V + +N +++ ++ I + ++ ++D+ +Q Sbjct: 406 QAGLGGGSGDGKSVGILSERGSVTTDQRTNTILVQDVSTKIEDVRRLVAQLDIP--VRQV 463 Query: 194 IIHLEYASAED-LAEILNQLISESHGKSQMPALLSAKI 230 +I +A+D A L S + + Sbjct: 464 LIEARIVTADDGFARDLGSRFGVSDVMNSGEVNGDFNV 501 >UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobacillus RepID=B5EP42_ACIF5 Length = 784 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 100/437 (22%), Positives = 176/437 (40%), Gaps = 52/437 (11%) Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR--QRITSLLKSLDVEE 262 + L+ + + +L ++ +A K +++ P Q L + Sbjct: 334 VTGSLSIRLKNEPWEQAFQVILQSQGLAVKHIGNILWVAPASQITSQEEAQLKADASKRK 393 Query: 263 SEEGNTRVYYLKYAKATNLVEVLTGVSEKL---KDEKGNARKPSSSGA------------ 307 E T + ++YAKA+ + +L G + E GN P+ + A Sbjct: 394 LEPLETELIRIRYAKASEIASLLQGFDQNKEPGGGETGNEMNPAQNAALASALGIPNSSL 453 Query: 308 ------MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 ++ +TNSL++ + +IA++D QVL+EA IV+V Sbjct: 454 IGNSLLGPRGSVAVVTRTNSLLVRDTPQDIANIKHLIAKIDRPVPQVLIEARIVQVTTSA 513 Query: 362 GLNLGVQWANKNVGAQ-----QFTNTGLPIFNAAQGVA-----------------DYKKN 399 +LGV W + TG + QG A Sbjct: 514 AQSLGVNWGGTYTSGGGGGIVNLSGTGATGVTSTQGGAYPMSGTTTTTGTGFTTPALVNL 573 Query: 400 GGITSANPAWDMFSAYNGMAAGFFNGD--WGVLLTALASNNKNDILATPSIVTLDNKLAS 457 T+ M A G A G G+ + L AL ++N+ I+++P ++T DN+ A Sbjct: 574 VPSTAGTALASMNPASLGFALGTAAGNRILNLQLQALQADNRAKIISSPKVLTQDNEKAV 633 Query: 458 FNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS 517 GQ++P + + + V K L VTP ++ + L+++ + + Sbjct: 634 IEQGQEIPYQQATSSGA-----TAVSFKKAVLSLDVTPHISPNGKITLDVDARNDQPNYA 688 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 G NT+ ++ +LV G+TVV+GG+ D + + + VPLL DIPL+G LF+ Sbjct: 689 QAMPSGIPINTQQVKTKLLVNNGQTVVIGGIYTDSTTQNETGVPLLRDIPLLGWLFKSHI 748 Query: 578 TERAKRNLMVFIRPTII 594 AK L+VF+ P ++ Sbjct: 749 NSVAKTELLVFLTPKVV 765 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 88/259 (33%), Gaps = 44/259 (16%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY-QFFLSIL 83 + +F N +R ++++ + I++ +V G++S+R + E + Q F IL Sbjct: 301 GARLSMDFQNISVRDALQVIADFTHQNIVVSNNVTGSLSIRL-----KNEPWEQAFQVIL 355 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G +V + N S + + + L T ++ + A ++A L Sbjct: 356 QSQGLAVKHIGNILWVAPASQITSQEEAQLKADASKRKLEPLETELIRIRYAKASEIASL 415 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 L+ G G ++ + A+ Sbjct: 416 LQGFDQNKEPGG--------------------------------GETGNEMNPAQNAA-- 441 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES 263 LA L S G S + S +V RTNSL++ + I L+ +D Sbjct: 442 -LASALGIPNSSLIGNSLLGPRGSVAVV--TRTNSLLVRDTPQDIANIKHLIAKIDRPVP 498 Query: 264 EEG-NTRVYYLKYAKATNL 281 + R+ + + A +L Sbjct: 499 QVLIEARIVQVTTSAAQSL 517 >UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-like n=8 Tax=Pseudomonas syringae group RepID=Q4ZRP9_PSEU2 Length = 776 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 114/554 (20%), Positives = 226/554 (40%), Gaps = 31/554 (5%) Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 + ++ L + + + D+ + + L+ +L P Sbjct: 226 RENAFLLVDPARNVLSLAGTPEELANYQDTIDTFDVDWLKGMSVGVFGLQRASVGELMPE 285 Query: 144 LRQMMDAGSVGNV------VHYEPSNVLI-LTGRASTINKLIEVIKRVDVIGTEK--QQI 194 L++M S + + E +N ++ ++ + ++++ E I +D G + + Sbjct: 286 LQKMFGPESGMPLAGMVRFLPIERTNSVVAISSQPEYLHEVGEWIHTIDEGGGNEPQMYV 345 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 + A DLA+ L Q+ K PA ++ + ++ G ++ Sbjct: 346 YDVRNMKATDLAKYLRQIYGTGAIKDDSPAKVAPGLRTTTLSSLNSSGGSGVGGMSSSNG 405 Query: 255 LKSLDVEESEEGNTRVYYLKY-------AKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 L S G +++ + + G+ +S Sbjct: 406 LGSNGGGMGNGGGFGNSQSMNNSQNSADSESEGDDQGGGDSDSDSASQDGSGSSGASKSL 465 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 + ITA + +N L++ + +++ + I RLD QV +E I+EV+ L++GV Sbjct: 466 DASTRITAQKSSNQLLVRTRPAQWKEIESAIKRLDNPPLQVQIETRILEVKLTGELDMGV 525 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW 427 QW + T + +QG + ++ + F + + Sbjct: 526 QWYLGRLAGNSGTTGNVTNTAGSQG-----------AIGTGGAALASTDAFFYSFVSNNL 574 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS--QTTSGDNVFNTVERK 485 V L AL +N + +L+ PS+V ++N+ A VG ++P+ S T+ ++VE Sbjct: 575 QVALRALETNGRTQVLSAPSLVVMNNQQAQIQVGDNIPISQTSINTNTNTGTTLSSVEYV 634 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS--TLGPTFNTRTIQNAVLVKTGETV 543 G L V P++N G V ++I+Q+VS DSS + P +TR++ V ++G+TV Sbjct: 635 QTGVILDVVPRINPGGLVYMDIQQQVSDADSSGTTDANGNPRISTRSVATQVAAQSGQTV 694 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 +LGGL+ + E V+ VP LG IP + LF TS + + L+V I P +I R + Sbjct: 695 LLGGLIKQDNAETVNAVPYLGRIPGLRWLFGNTSKSKDRTELIVLITPRVITSSSQARQV 754 Query: 604 SKEKYTRYRQEQQQ 617 + + + + + + Sbjct: 755 TDDYRQQMQLLKPE 768 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 11/269 (4%) Query: 24 ENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 E NF N I+ + I+G L + I V+G +S ++ ++Q+ ++ Sbjct: 102 ETGDIVFNFTNQPIQAVINSIMGDLLHENYSIAQGVKGDVSFSTSKPVNKQQALSILETL 161 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L ++I N ++ ++ S + ++ + + R+ PL + A ++ Sbjct: 162 LSWTDNAMIKQGNRYV-ILPSNQA-VAGKLVPEMRVAQPSAGMSARLFPLRYISATEMQK 219 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG--TEKQQIIHLEYA 200 LL+ + ++ NVL L G + + I DV + L+ A Sbjct: 220 LLKPFARENAF--LLVDPARNVLSLAGTPEELANYQDTIDTFDVDWLKGMSVGVFGLQRA 277 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLLKSLD 259 S +L L ++ G MP + + +RTNS++ IS + + + ++D Sbjct: 278 SVGELMPELQKMFGPESG---MPLAGMVRFLPIERTNSVVAISSQPEYLHEVGEWIHTID 334 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGV 288 E VY ++ KAT+L + L + Sbjct: 335 EGGGNEPQMYVYDVRNMKATDLAKYLRQI 363 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 73/209 (34%), Gaps = 24/209 (11%) Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 V + +L ++ + + + +IL + KL+ ++ ++ Sbjct: 149 VNKQQALSILETLLSWTDNAMIK--QGNRYVILPSNQAVAGKLVPEMRVAQPSAGMSARL 206 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 L Y SA ++ ++L E +A ++ D N L ++G + Sbjct: 207 FPLRYISATEMQKLLKPFARE-----------NAFLLVDPARNVLSLAGTPEELANYQDT 255 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 + + DV+ + + V+ L+ A L+ L + V Sbjct: 256 IDTFDVDWLKGMSVGVFGLQRASVGELMPELQKMFGPESGMP----------LAGMVRFL 305 Query: 315 ADEQTNSLV-ITADQSVQEKLATVIARLD 342 E+TNS+V I++ ++ I +D Sbjct: 306 PIERTNSVVAISSQPEYLHEVGEWIHTID 334 >UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3G3_9GAMM Length = 672 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 108/480 (22%), Positives = 195/480 (40%), Gaps = 37/480 (7%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 L L ++ + D G + + L+ I + D G Sbjct: 214 HLAYQSENTLVVEVKPLPDQPQAGQDRNQFGYSGEKLSLNFQNIEVRAVLQLLADFTGM- 272 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKAR 248 +++ + L + + +L K +A ++ ++++ P E A Sbjct: 273 -------NLVTSDTVKGNLTLRLKNVPWDQALDIILKTKGLAMRQNGNVLMVAPAAEIAA 325 Query: 249 QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM 308 + L + E E T + +K+AKA L +L D K S Sbjct: 326 REKQELEAQKQLVELEPLYTEIVEIKFAKADLLATLLRT------DGKQGGNSGQSGFLS 379 Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 +IT D++TNSL+I + VI LD QVL+E+ IV + LGV+ Sbjct: 380 PRGSITIDDRTNSLLIRDTADNLVDIRQVIDELDKPVRQVLIESRIVIANNDFNKELGVR 439 Query: 369 WANKNVGAQQFTNTGLPIFNA-----------AQGVADYKKNGGITSANPAWDMFSAYNG 417 + + + A V N + +NP+ + A Sbjct: 440 FGTSAQSNTLGAGSSGSLTGLSTNPNNDDQIRANSVVGNDLNVNLPVSNPSGSIGLALAK 499 Query: 418 MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN 477 + G + L+A+ + K +++++P ++T + + A+ G ++P + + + + Sbjct: 500 LPLGMI---LELELSAMQAEGKGEVISSPRVITSNQQQATIEQGTEIPYQEATSSGATN- 555 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLV 537 V K KL VTPQ+ D +++++E V P+ +TR+++ VLV Sbjct: 556 ----VSFKEAVLKLDVTPQITPDDRIVMDLEVSKDEVGEV--FLGVPSIDTRSVKTQVLV 609 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 GETVVLGG+ + + + V +VP GD+P VG LF+ T E KR L+VF+ P I+++ Sbjct: 610 DNGETVVLGGIYEQSTNDNVERVPFFGDLPYVGFLFKNTFKEDRKRELLVFVTPKIVKEG 669 Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 14/174 (8%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+ NF N ++R ++++ G ++ +V+G +++R + IL Sbjct: 246 SGEKLSLNFQNIEVRAVLQLLADFTGMNLVTSDTVKGNLTLRL-KNVPWDQALDI---IL 301 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G ++ N + + + + + L T IV ++ A LA L Sbjct: 302 KTKGLAMRQNGNVLMVAPAAEIAAREKQELEAQKQLVELEPLYTEIVEIKFAKADLLATL 361 Query: 144 LRQMMDAGS----------VGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 LR G G++ + +N L++ A + + +VI +D Sbjct: 362 LRTDGKQGGNSGQSGFLSPRGSITIDDRTNSLLIRDTADNLVDIRQVIDELDKP 415 >UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTT2_9GAMM Length = 721 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 104/386 (26%), Positives = 185/386 (47%), Gaps = 19/386 (4%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 +L K + +++ ++++ P E A+Q +L V+E + + + +AKA ++ Sbjct: 338 ILKTKGLDKRKSGNVLLIAPAEEIAQQEKLALEAKQQVQELAPLQSEFFEVNFAKAEQIL 397 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 ++ G SE + + K SS + T D +TN+L++T V E++ +++ RLD Sbjct: 398 NLIKGKSEDGEGQSEGDSK-SSGLLSERGTATVDARTNTLMVTDTAVVMEQIRSMLQRLD 456 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG------AQQFTNTGLPIFNAAQGVADY 396 I QVL+E+ IV D LG ++ + F + Q D Sbjct: 457 IPVKQVLIESRIVIASDDFDKQLGSRFGVNRIDPLPVGEGAVFGGSDTFNLQGRQSGGDL 516 Query: 397 KKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL---LTALASNNKNDILATPSIVTLDN 453 N + N + S+ A +L L+AL + K +I++TP ++T + Sbjct: 517 NINSRPMNFNFPANAGSSTGQFAFALPTSSGNLLELELSALQAEGKGEIISTPRVITANQ 576 Query: 454 KLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS 513 K A G ++P L + + + TV K L TPQ+ D ++L++ + + Sbjct: 577 KEAFIEQGVEIPYLEAASSGA-----VTVAFKKAVLSLTATPQITPDDRIILDLNVKKDN 631 Query: 514 VDS--SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 V P+ +TR ++ VLVK GETVVLGG+ + + + V+K+P LGDIP +G+ Sbjct: 632 VGEIFGEGEIQVPSIDTREVETQVLVKNGETVVLGGIFEHETLDSVTKIPFLGDIPGIGR 691 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRDD 597 LFR + +KR +++F+ P I+RD Sbjct: 692 LFRREIKQNSKREILIFVTPKIVRDS 717 Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 62/178 (34%), Gaps = 19/178 (10%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ NF + ++R ++++ G +++ SV G++++R + + IL Sbjct: 285 GERLSLNFQDIEVRSVLQLIADFTGLNVVVSDSVSGSLTLRL-KNVPWDQALEI---ILK 340 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G N L + + + L + + A + L+ Sbjct: 341 TKGLDKRKSGNVLLIAPAEEIAQQEKLALEAKQQVQELAPLQSEFFEVNFAKAEQILNLI 400 Query: 145 RQMMDAG---------------SVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 + + G G +N L++T A + ++ +++R+D+ Sbjct: 401 KGKSEDGEGQSEGDSKSSGLLSERGTATVDARTNTLMVTDTAVVMEQIRSMLQRLDIP 458 >UniRef50_A1U3Z5 Type II and III secretion system protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U3Z5_MARAV Length = 733 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 130/639 (20%), Positives = 242/639 (37%), Gaps = 70/639 (10%) Query: 25 NEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQGT---ISVRSNDTFSQQEYYQFFL 80 + N+ + F+ E+ G+ LG + + PS+ +++R + ++ Sbjct: 110 GDPISLELNDLPLPVFINEVFGEKLGLSFSLAPSLADKTDLVTLRLSTPLEPSALFRTAR 169 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTS--PGMIADSSRP--GVGDELVTRIVPLENVP 136 S+L YG ++ G + NV T P +++ + P V +++PL+ Sbjct: 170 SVLADYGVAM-EQKEGLWVFSPAENVSTQGVPLLVSGEALPDVPASHRPVFQVIPLQVTS 228 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQI 194 + ++ + GS + N +IL G T+ + + + D + Sbjct: 229 NNQVRGVVSSLF-KGSKLEIQEDALRNAIILKGDRQTVEEAAQAVAFFDRPLLQGRNSLV 287 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPA--LLSAKIVADKRTNSLIISG-PEKARQRI 251 + + LA L ++S P +S I+ S+++ G + Sbjct: 288 LRPVFRDVSSLASALQDILSAEGFAVGRPGGTGVSMNILPLPELGSIVVLGRSREILSHA 347 Query: 252 TSLLKSLDV--EESEEGNTRVYYLKYAKATNLVEVL---------------------TGV 288 + LD + E Y ++ A L +L TG Sbjct: 348 RQWAEKLDQDFQREIESGMFTYEVQNTSAEELASLLSQLYGGNELAGSRSARSGESNTGT 407 Query: 289 SEKLKDEKGNARKPSS----SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIR 344 S E R+ S S + + D+ N L+ + KL + LD + Sbjct: 408 SNASDQETSTTRRAGSTVSVSTEVAGGRLVVDKNRNVLIFRGSGADWLKLREIAVELDKQ 467 Query: 345 RAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITS 404 VL+E ++ EV + +GV+W +N V D Sbjct: 468 VPSVLMEVVLAEVTLNDNQGMGVEWLARN------------------SVGDLSGTLETLG 509 Query: 405 ANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464 +Y +AG +L A +N+ I ++P I+ + A+ VG ++ Sbjct: 510 GLGIGGRGFSYTLNSAG----QTRAVLNAFYDSNQAVIRSSPKIMVKSGETATIEVGNEI 565 Query: 465 PVLSG-----SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSS 518 PVL+ +QT +V + + G L V P V V + I Q +S D+S Sbjct: 566 PVLTSTRQSDTQTDGDTDVLQQFQYRKTGVDLTVEPIVQASGLVDIRIRQSLSETQDTSG 625 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 + PT R ++ ++ ++ G +VVLGGL+ + + VP LG +PL+G LFR S Sbjct: 626 GDSFLPTILNRAVETSLTLRDGGSVVLGGLISKTNSQGEQGVPWLGKLPLLGPLFRTDSD 685 Query: 579 ERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 + LMV + P ++R+D+ R++S+ R + + Sbjct: 686 STSTTELMVMVVPYVVRNDEEARNVSELLRERIQNSSAE 724 >UniRef50_A8UYL2 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UYL2_9AQUI Length = 550 Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats. Identities = 120/585 (20%), Positives = 246/585 (42%), Gaps = 53/585 (9%) Query: 30 ANFNNADIRQFVEIVGQHLGKTILIDPSVQG----TISVRSNDTFSQQEYYQFFLSILDL 85 F + V+ + + + K ++IDP+++ +++ S E + IL Sbjct: 1 MKFEGVKLDTVVKALAKVVKKNVIIDPNIKDLLKTDVNIYIQKPLSVNEAFNL---ILKE 57 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 YG + +++ K+ R+ ++ S G + +S + + L R+ + + L+ Sbjct: 58 YGLIAVPVNDDIYKITRAGELEISIGELDESDIEKIIELLKRRVSASAEI---VIDKTLK 114 Query: 146 QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDL 205 + S N+ E + L + + I + ++ +L+ + +D Sbjct: 115 TLYVRDSEKNIKKLEKT----LKKYIDKL-LAEKAIGIEERPEAVVTKVFYLKTINIDDA 169 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSL--DVEES 263 ++L IS+ ++ P N+L+I+ + ++ +LK + Sbjct: 170 EQLLAPHISKETLITKAPTF-----------NALVITDTTERIKKYEEVLKEFLVTSPAA 218 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGV-SEKLKDEKGNARKPSSSGAMDNVAITADEQT--- 319 + T ++YL+Y ++++ + SE G A K ++ A ++ T Sbjct: 219 RKPVTEIFYLRYISPAEFIKMIEPIRSEAGLVLTGGAVKIETAQGQGQQAQAKEKVTPIL 278 Query: 320 ---NSLVITADQSVQEKLATVIARL--DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 N++++T + EK+ + D+ QV +EA I+EV+ LG+ W+ Sbjct: 279 KEFNAVMLTDYPEIIEKIKEQFSEYISDVP-PQVKIEARILEVRKEVVRELGINWSALLS 337 Query: 375 GAQ-QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTA 433 A+ Q + +G N G A G IT + A A G N + L+A Sbjct: 338 NAKVQQSWSGGAGVNLGVGQA-----GAITPSLSATPGGILTFTYAKGALNA-LNLRLSA 391 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 K LA P+IVT++ + A GQ++P + +G + +++ K +L V Sbjct: 392 FERLGKIKSLAKPTIVTINGQNAVIKQGQEIPYQTA--VIAGGSSVPSIQFKEAVLELNV 449 Query: 494 TPQVNEGDAVLLE--IEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDD 551 P ++ +LL+ ++QE+ + +GPT + + V+V G+T+V+GG++D Sbjct: 450 LPIISPDGRILLDMELKQEI----PGVQTPIGPTIIKKQVSTKVIVNNGDTIVIGGIIDS 505 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 ++ V L +P++ LF S L++FI P+II + Sbjct: 506 LNRNTKEGVAGLVRVPILKWLFGQESKHIQDIELLIFITPSIITE 550 >UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadaceae RepID=B9MDF0_DIAST Length = 696 Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats. Identities = 109/493 (22%), Positives = 212/493 (43%), Gaps = 37/493 (7%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT- 189 P++ + A +R +D Y+ N ++ R ++ L ++ + G Sbjct: 219 PVQTITASQQGERVRLTIDPVGEWEHSAYQSDNQFVVEVRPKKVD-LTKLTQGPAYSGEK 277 Query: 190 -----EKQQIIHLEYASAE----------DLAEILNQLISESHGKSQMPALLSAKIVADK 234 + ++ L A+ + L + + + ++ AK + + Sbjct: 278 LSLNFQNIEVRSLLQVIADFTNFNIVTSDTVTGALTLRLKDVPWDQALQIIMDAKGLGMR 337 Query: 235 RTNSLIISGPEKARQR--ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 ++ +++ P+ +L +++ E T+ + L YAKA ++V LT S+ Sbjct: 338 KSGTVLWIAPKDEIDERTKKDYEAALAIQKLEPLRTQAFQLNYAKAADMVTQLTMSSQGG 397 Query: 293 KDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEA 352 G + + D + ++ +TN L +T + E++ ++A LD+ QV++EA Sbjct: 398 SSTSGYSNR----FLSDRGSAISEPRTNQLFVTDTSAKLEEVRQLLATLDVPVRQVMIEA 453 Query: 353 IIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMF 412 IVE +D G +LGV+ + G + S + Sbjct: 454 RIVEARDTFGRSLGVRLGGGSRTGGSAVGGTYDNVAGPTGGSGMSP---FVSLPASLSGV 510 Query: 413 SAYNGMAAGFFNGD----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS 468 S A FN + + L+A+ ++ + I+++P ++T D A G + P Sbjct: 511 STVGSFALSIFNSNASRFLSLELSAMEADGQGKIVSSPRLITADQTKALIEQGTEYPY-- 568 Query: 469 GSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNT 528 + + N T+ K KL+VTPQ+ ++L+++ S S+ T G +T Sbjct: 569 ---SVTAPNGATTIAFKKAVLKLEVTPQITPEGNIILDLDVNKDSRGEST--TQGVAIDT 623 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 + I+ VL++ G TVV+GG+ + Q +K+P+LGD+P+VG LF+ + E KR ++VF Sbjct: 624 KHIKTQVLIENGGTVVIGGIFEMEETNQENKIPVLGDVPVVGNLFKNRTKESTKREMLVF 683 Query: 589 IRPTIIRDDDVYR 601 I P +I D R Sbjct: 684 ITPKVITDRGPVR 696 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 16/181 (8%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+ NF N ++R ++++ I+ +V G +++R + Q I+ Sbjct: 274 SGEKLSLNFQNIEVRSLLQVIADFTNFNIVTSDTVTGALTLRL-KDVPWDQALQI---IM 329 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 D G + + + + + + L T+ L A D+ Sbjct: 330 DAKGLGMRKSGTVLWIAPKDEIDERTKKDYEAALAIQKLEPLRTQAFQLNYAKAADMVTQ 389 Query: 144 LRQMMDAGS------------VGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 L GS G+ + +N L +T ++ + ++ +++ +DV + Sbjct: 390 LTMSSQGGSSTSGYSNRFLSDRGSAISEPRTNQLFVTDTSAKLEEVRQLLATLDVPVRQV 449 Query: 192 Q 192 Sbjct: 450 M 450 >UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fastidiosa RepID=B2I8B2_XYLF2 Length = 636 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 111/522 (21%), Positives = 205/522 (39%), Gaps = 43/522 (8%) Query: 102 RSANVKTSPGMIADSSRPGVGDELVTRIVPLEN-------VPARDLAPLLRQMMDAGSVG 154 + A + S +S GDE V IVP + + ++ ++ G G Sbjct: 137 KGAQLVLSTKGAFESLAYQTGDEYVVEIVPRKGEAAMGGAITPESVSKSAAKISAQGYSG 196 Query: 155 NVVHY-----EPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEIL 209 V + VL L S +N ++ V G ++I++ + A D+ Sbjct: 197 RPVTFNFQDVPVRTVLQLIADESNLN----IVASDTVQGNVTLRLINVPWDQALDIV--- 249 Query: 210 NQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL--LKSLDVEESEEGN 267 L AK + +R +I P++ + + +E E Sbjct: 250 ----------------LRAKGLDKRRDEKVIWVAPQQELAKYEQEKEDARIAIENREGLI 293 Query: 268 TRVYYLKYAKATNLVEVLT-GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITA 326 T + Y AT + + LT + + ADE+TN+L+I+ Sbjct: 294 TDYVQINYHSATVIFKALTEAKGMGGGGNGTPNNNSDDAFLSPRGRLVADERTNTLMISD 353 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPI 386 ++ T+I +D QVL+E IV D +LG ++ + Sbjct: 354 IPKKVAQMRTLIQHIDRPVDQVLIEGRIVIATDSFARDLGAKFGVGAASRFSDNTATIGS 413 Query: 387 FNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG--DWGVLLTALASNNKNDILA 444 A + + P S +A + + L+AL ++ ++++ Sbjct: 414 NVTAGSSTSATRGLNVDLGGPTNTTASVLPSLAYTLLGPKFNLDLELSALQQESRGEVIS 473 Query: 445 TPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVL 504 P IVT + + G+++ ++ + +G V+ K +L+VTP + + V Sbjct: 474 NPRIVTANQREGYIKQGKEIGYVTITGGVAGGQATPNVQFKEAVLELRVTPTITNDNRVF 533 Query: 505 LEIEQEVSSVD---SSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVP 561 L + + +D + +N PT N R I AVLV G+TVV+GG+ + + VSKVP Sbjct: 534 LNMTVKKDEIDQMITIANFGTVPTLNKREINTAVLVDDGQTVVIGGVYEFSDRNSVSKVP 593 Query: 562 LLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 LGD+P +G LF+ ++ K L++F+ P ++R + ++ Sbjct: 594 FLGDVPFLGNLFKKRGKDKQKAELLIFVTPKVLRVANATAAV 635 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 23/183 (12%), Positives = 55/183 (30%), Gaps = 25/183 (13%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 NF + +R ++++ I+ +VQG +++R + + +L Sbjct: 195 SGRPVTFNFQDVPVRTVLQLIADESNLNIVASDTVQGNVTLRLIN-VPWDQALDI---VL 250 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G + + K + L+T V + A + Sbjct: 251 RAKGLDKRRDEKVIWVAPQQELAKYEQEKEDARIAIENREGLITDYVQINYHSATVIFKA 310 Query: 144 L-------------------RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 L + G +V E +N L+++ + ++ +I+ + Sbjct: 311 LTEAKGMGGGGNGTPNNNSDDAFLSP--RGRLVADERTNTLMISDIPKKVAQMRTLIQHI 368 Query: 185 DVI 187 D Sbjct: 369 DRP 371 >UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Proteobacteria RepID=Q489N5_COLP3 Length = 706 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 100/389 (25%), Positives = 172/389 (44%), Gaps = 32/389 (8%) Query: 220 SQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAK 277 + +L K + + ++++ P E A + SL VEE + + YAK Sbjct: 336 QALSIILKVKGLDKRMQGNILMVAPSDELAAREAQSLQAKQQVEELATLYSEYLQINYAK 395 Query: 278 ATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATV 337 A E++ + ++G +++ DE+TN+L+I E + + Sbjct: 396 AAEFSELIKNEDTSILSDRG--------------SVSVDERTNTLLIRDTAKSIEDIKRM 441 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 I LD+ QV++EA +V V+D LG++W N + T+ + ++A G Sbjct: 442 ITILDVPVRQVVIEARMVTVKDNMNEELGIRWGVTNTDGEFATSGSIEGASSANGTRGVT 501 Query: 398 KNG---------GITSANPAWDMFSAYNGMAAGFFNGD-WGVLLTALASNNKNDILATPS 447 G G+ P + A NG + L+AL NK +++A+P Sbjct: 502 TPGVGQVPTIGDGLNVNLPVANAAGTIAFQVARLANGTILDLELSALEKENKGEVIASPR 561 Query: 448 IVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 I T + K A G ++P + + + + K L VTP + D ++L++ Sbjct: 562 ITTANQKEAYIEQGVEIPYQEAASSGATAT-----QFKKAVLSLTVTPHITPDDKIILDL 616 Query: 508 EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 ++ S S P +T+ I VLV GET+VLGG+ VSK+P+LGDIP Sbjct: 617 VVTQDTI-SDITSGFAPAIDTQRIGTQVLVNNGETIVLGGIYQQAIISTVSKIPILGDIP 675 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 +G LFR +S K+ L++F+ P I+ + Sbjct: 676 YLGWLFRNSSQLNEKKELLIFVTPRIVTE 704 Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 65/182 (35%), Gaps = 8/182 (4%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 +F + +R ++I+ + ++I +V G I++R + + IL Sbjct: 288 GRSISLSFQDIPVRTVLQIIADYNEFNLIISDTVTGNITLRLDG-VPWDQALSI---ILK 343 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 + G N + + + L + + + A + + L+ Sbjct: 344 VKGLDKRMQGNILMVAPSDELAAREAQSLQAKQQVEELATLYSEYLQINYAKAAEFSELI 403 Query: 145 R--QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASA 202 + G+V E +N L++ A +I + +I +DV +Q +I + Sbjct: 404 KNEDTSILSDRGSVSVDERTNTLLIRDTAKSIEDIKRMITILDVP--VRQVVIEARMVTV 461 Query: 203 ED 204 +D Sbjct: 462 KD 463 >UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas intermedia K12 RepID=C7HZW7_THIIN Length = 752 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 107/447 (23%), Positives = 183/447 (40%), Gaps = 48/447 (10%) Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITS 253 HL ++ + L + + + +L AK + +++ +++ P E + Sbjct: 313 HLNVVVSDSVTGNLTLRLKDVPWDQALQVILRAKGLGERKEGNVLWIAPRDEILAREKAD 372 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK------------GNARK 301 L + E + + L Y KA +V +LTG + + ++ Sbjct: 373 LEAKKSLSALEPVKSETFQLNYQKAATVVAMLTGAAGGAQSGTTATPSPVLLPGLSSSAA 432 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 P+S + AD +TN + +T S E++A +IA++D QV++EA IVE D Sbjct: 433 PTSRILSPRGTVLADPRTNQIFVTDIPSKLEEVAQLIAKIDKPVRQVMIEARIVEASDQF 492 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN----- 416 G +LGV+ + Q G + G G N + Sbjct: 493 GRSLGVKLGFLDARGIQGGVPGTNLVGGTYGTVSGDYLGVANQTNQPGSSAATLADSQFV 552 Query: 417 -----GMAAGFFNGD-----------------WGVLLTALASNNKNDILATPSIVTLDNK 454 G+A G + L+A+ ++ K I+++P ++T D Sbjct: 553 NLPAFGLAGSLLAGAAPSSLGISLFNAAANRFINLELSAMEADGKGKIISSPRVITADLS 612 Query: 455 LASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV 514 A+ G ++P + + + V K L VTPQ+ V++ +E S Sbjct: 613 KATIEQGTEIPYQQATSSGA-----TAVTFKKAVLSLDVTPQITPDGNVIMNVEIHKDSP 667 Query: 515 DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFR 574 +S+ P+ NT T+ V V+ G TVVLGG+ + Q KVPLLGDIP++G LF+ Sbjct: 668 GASTAGV--PSINTNTVTTQVQVENGGTVVLGGIYTSQEQNQTDKVPLLGDIPVLGNLFK 725 Query: 575 YTSTERAKRNLMVFIRPTIIRDDDVYR 601 S K LMVF+ P I+ + D+ Sbjct: 726 NNSKMYNKNELMVFLTPKIVTNADLSH 752 Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 32/196 (16%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ NF N D+R +++ +++ SV G +++R + Q IL Sbjct: 289 GQKLSLNFQNIDVRSLLQVFADFTHLNVVVSDSVTGNLTLRL-KDVPWDQALQV---ILR 344 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G N R + + + + + L A + +L Sbjct: 345 AKGLGERKEGNVLWIAPRDEILAREKADLEAKKSLSALEPVKSETFQLNYQKAATVVAML 404 Query: 145 ---------------RQMMDAG-------------SVGNVVHYEPSNVLILTGRASTINK 176 ++ G G V+ +N + +T S + + Sbjct: 405 TGAAGGAQSGTTATPSPVLLPGLSSSAAPTSRILSPRGTVLADPRTNQIFVTDIPSKLEE 464 Query: 177 LIEVIKRVDVIGTEKQ 192 + ++I ++D + Sbjct: 465 VAQLIAKIDKPVRQVM 480 >UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteobacteria RepID=A0KN30_AERHH Length = 733 Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats. Identities = 113/417 (27%), Positives = 189/417 (45%), Gaps = 39/417 (9%) Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITS 253 +L + + ++ + + + + +L + + + N++++ P E A + Sbjct: 338 NLNLVTTDSVSGNITLRLDGVPWEQALDIILKVRGLDKRLDNNILLVAPAEEIAAREKQQ 397 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAI 313 L V + T + YAKA+ + +L+ S KL KG A+ Sbjct: 398 LESRNQVADLAPLYTEYLQINYAKASEVAALLSSESTKLLSSKG--------------AV 443 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 + DE+TN LV+ V + ++ LDI QV++EA +V + DG LGV+W Sbjct: 444 SVDERTNVLVVKDTADVISNIKRMLDILDIPVKQVVIEARMVTIDDGFDEALGVRWGVTK 503 Query: 374 VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWD--------MFSAYNGMAAGFF-- 423 + +G N + G NGG T P D + +A +A Sbjct: 504 NDGHGNSTSGTIEGNDSSG----NNNGGSTITRPGVDDRLNVNLPVTNAAGTLAFQVARL 559 Query: 424 --NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT 481 + L+AL +K +I+A+P + T + K A G ++P + S + + + Sbjct: 560 ADGTLLDLELSALEKESKAEIIASPRVTTANQKPALIEQGTEIPYVESSSSGA-----TS 614 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG--PTFNTRTIQNAVLVKT 539 V K LKVTPQ+ + V+L++ + + + G + N ++I VLV Sbjct: 615 VTFKKAVLSLKVTPQITPDNRVILDLTVTQDTKGETVPTGTGDAVSINAQSITTQVLVNN 674 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 GET+VLGG+ K VSKVPLLGDIP +G LFR T++E KR L++F+ P I+ D Sbjct: 675 GETLVLGGIYQQTIKSDVSKVPLLGDIPGLGVLFRKTTSENKKRELLIFVTPKIVTD 731 Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 8/167 (4%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + + NF + +R ++++ ++ SV G I++R + ++ IL Sbjct: 313 QGKPISLNFQDIPVRTVLQLIADFNNLNLVTTDSVSGNITLRLDG-VPWEQALDI---IL 368 Query: 84 DLYGYSVITLDNGFLKVVRSAN-VKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 + G LDN L V + + ++ L T + + A ++A Sbjct: 369 KVRGLD-KRLDNNILLVAPAEEIAAREKQQLESRNQVADLAPLYTEYLQINYAKASEVAA 427 Query: 143 LLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 LL S G V E +NVL++ A I+ + ++ +D+ Sbjct: 428 LLSSESTKLLSSKGAVSVDERTNVLVVKDTADVISNIKRMLDILDIP 474 >UniRef50_C1ZGU1 Type II secretory pathway, component PulD n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGU1_PLALI Length = 1445 Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats. Identities = 141/648 (21%), Positives = 239/648 (36%), Gaps = 99/648 (15%) Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 +VI + S G + V ++ R + P + + Sbjct: 710 AVINAAIQSVLSPPSNQAANQGGANSGLGGNQVAEDF------------RQVRPAILSFL 757 Query: 149 DAGSVG---------NVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQIIHL 197 + N LIL+ +I L E+I+++D + ++ L Sbjct: 758 AGDKKALRSGMLADIRITPDTRMNSLILSAPEQSIPLLEELIRQLDQPTAAVAEIKVFTL 817 Query: 198 EYASAEDLAEILNQLISE--------------------SHGKSQMPALLSAKIVADKRTN 237 A A L L QL S + L+ + D RTN Sbjct: 818 TNADASQLVTQLQQLFSPGGNQQGGGNNALRQQLGLAVAGADDASSNLIPLRFSVDTRTN 877 Query: 238 SLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV--SEKLKDE 295 S+ G +A + + ++L LD + E V+ LK + A + +T S+ + Sbjct: 878 SITAIGGAEALRVVEAILLRLDESDLRERKNVVFKLKNSPALAVSTAVTQFVNSQLQLSQ 937 Query: 296 KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 + + V + + TNSL+I+A +++ ++ LD QV+++A+IV Sbjct: 938 QNPNLISTVEQLEREVVVVPETGTNSLLISATPRYYDEITRLVMELDQAPRQVIIQALIV 997 Query: 356 EVQDGNGLNLGVQWA---------------------NKNVGAQQFTNTGLPIFNAAQGVA 394 EV N GV+ + Q T + AA G Sbjct: 998 EVTLDNVDEFGVELGLQDSVLFDRSVVDDLVTLTETTTSPNGTQTTTQRVVSQTAAPGFL 1057 Query: 395 DYKKN---GGITSANPAWDMFSAYNGMAAGFFNGDWG--------------VLLTALASN 437 N G T+ NP+ + + G N D G VL+ ALAS Sbjct: 1058 FNNPNTPLGNNTTINPSSVGSQGLSSFSLGRVNNDLGYGGLVLSAGSESVNVLIRALASR 1117 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQV 497 + +L+ P I TLDN+ A VGQ VP++ G Q + + + G L VTP++ Sbjct: 1118 RRLQVLSRPQIRTLDNQQAQIQVGQQVPIVDGVQIGATGLANPQIRQDQAGIILTVTPRI 1177 Query: 498 NEGDAVLLEIEQEVSSV----------DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGG 547 + +++E+ E S ++ N P + + A+ V G+TVV+GG Sbjct: 1178 SPDGTIVMELIAEKSQFRGNGVPIFTDATNGNVIESPIKDISAARTAISVPNGQTVVMGG 1237 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 ++ + KVP +GDIP+VG LFRY S + L++F+ P +I D + + Sbjct: 1238 MITATDETSERKVPFIGDIPIVGHLFRYDSKSHVRTELLIFLTPRVISSDADSEFIKDVE 1297 Query: 608 YTRYR------QEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAPSS 649 R +E + + ++G D + S P P S Sbjct: 1298 MGRLHFIECEAEEIHGPLRAINAPVMGDPDWTNQLSPSVPSVDPMPPS 1345 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 125/387 (32%), Gaps = 56/387 (14%) Query: 98 LKVVRSANVKTSPGMIADSSRPGVGDELVTR--IVPLENVPARDLAPLLRQMMD------ 149 + ++R M + + + ++ L + + ++ LL + D Sbjct: 514 VLILRGNEADVEQVMKVIRELEALSENTAPQLHVLYLSHTDSPAMSELLTLVFDSLAKFP 573 Query: 150 -----AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT--EKQQIIHLEYASA 202 ++ + N LI+ + ++ ++E+ + +D + ++ L+ A A Sbjct: 574 GRATQPRQNVAIIPVDTPNALIIVAPKTDLDSILELAEELDQPTDPESEFEVFSLKTAVA 633 Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE 262 + + + G +AD R+NS+I+ + ++ +L+ +D +E Sbjct: 634 SQVVTNITAFYATRVGLGA-----RVLAIADPRSNSVIVRARPRDLDQVKALIAKVDRDE 688 Query: 263 SEEGN-TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS----------------- 304 N ++ LK A A L V+ + + N Sbjct: 689 MAAVNQVKIIPLKNAVAVELSAVINAAIQSVLSPPSNQAANQGGANSGLGGNQVAEDFRQ 748 Query: 305 -----------------SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 SG + ++ IT D + NSL+++A + L +I +LD A Sbjct: 749 VRPAILSFLAGDKKALRSGMLADIRITPDTRMNSLILSAPEQSIPLLEELIRQLDQPTAA 808 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP 407 V E + + + + L Q G G+A + ++ P Sbjct: 809 VA-EIKVFTLTNADASQLVTQLQQLFSPGGNQQGGGNNALRQQLGLAVAGADDASSNLIP 867 Query: 408 AWDMFSAYNGMAAGFFNGDWGVLLTAL 434 + ++ A+ Sbjct: 868 LRFSVDTRTNSITAIGGAEALRVVEAI 894 Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 120/349 (34%), Gaps = 39/349 (11%) Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 DL L D S +V P ++L + K+ R+ V + + Sbjct: 407 DLLTSLDTKGDWPSDAKIVPTTPQAAIMLAQYQPDLEKMRRQ-NRLTVAQAGNTPAANPQ 465 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLS---------AKIVADKRTNSLIISGPEKARQ 249 + + A Q E+ + + +S I A LI+ G E + Sbjct: 466 RENDDPFAPAPAQAKPEAAQPPRGNSAISDVVTNLKGDVNIEAIGDLGVLILRGNEADVE 525 Query: 250 RITSLLKSLDV-EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM 308 ++ +++ L+ E+ V YL + + + E+LT V + L G A +P Sbjct: 526 QVMKVIRELEALSENTAPQLHVLYLSHTDSPAMSELLTLVFDSLAKFPGRATQP-----R 580 Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRR-AQVLVEAIIVEVQDGNGLNLGV 367 NVAI + N+L+I A ++ + + + LD + E L V Sbjct: 581 QNVAIIPVDTPNALIIVAPKTDLDSILELAEELDQPTDPESEFEV--------FSLKTAV 632 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP-------------AWDMFSA 414 + F T + + +AD + N I A P D +A Sbjct: 633 A-SQVVTNITAFYATRVGLGARVLAIADPRSNSVIVRARPRDLDQVKALIAKVDRDEMAA 691 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 N + V L+A+ + +L+ PS + A+ +G + Sbjct: 692 VNQVKIIPLKNAVAVELSAVINAAIQSVLSPPSNQAANQGGANSGLGGN 740 >UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammaproteobacteria RepID=PILQ_PSEAE Length = 714 Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats. Identities = 109/503 (21%), Positives = 209/503 (41%), Gaps = 47/503 (9%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLIL------TGRASTI---------N 175 P++ V A + ++ + + + Y+ N L + T A Sbjct: 223 PVQFVNASAQSDRTSITIEPSGLYDYLVYQTDNRLTVSIKPMTTEDAERRKKDNFAYTGE 282 Query: 176 KLIEVIKRVDVIGTEKQ--QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVAD 233 KL + +DV + L +++ + + + + +L K + Sbjct: 283 KLSLNFQDIDVRSVLQLIADFTDLNLVASDTVQGNITLRLQNVPWDQALDLVLKTKGLDK 342 Query: 234 KRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEK 291 ++ ++++ P E A + L + E + + YAKA ++ ++ V+ Sbjct: 343 RKLGNVLLVAPADEIAARERQELEAQKQIAELAPLRRELIQVNYAKAADIAKLFQSVTSD 402 Query: 292 LKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 E + S IT D++TNS++ Q ++L ++++LDI QV++E Sbjct: 403 GGQEGKEGGRGS---------ITVDDRTNSIIAYQPQERLDELRRIVSQLDIPVRQVMIE 453 Query: 352 AIIVEVQDGNGLNLGVQWAN-----KNVGAQQFTNTGLPIFNAAQ-----GVADYKKNGG 401 A IVE G +LGV+W G + N G+ + G + G Sbjct: 454 ARIVEANVGYDKSLGVRWGGAYHKGNWSGYGKDGNIGIKDEDGMNCGPIAGSCTFPTTGT 513 Query: 402 ITSANPAWDMFS--AYNGMAAGFFNGD--WGVLLTALASNNKNDILATPSIVTLDNKLAS 457 S +P D+ + A +G+ GF + + L+A+ +I++ P +VT D + A Sbjct: 514 SKSPSPFVDLGAKDATSGIGIGFITDNIILDLQLSAMEKTGNGEIVSQPKVVTSDKETAK 573 Query: 458 FNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS 517 G +VP S + + K L+VTPQ+ + +++E++ + D Sbjct: 574 ILKGSEVPYQEASSSGATSTS-----FKEAALSLEVTPQITPDNRIIVEVKVTKDAPDYQ 628 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 + P N + +LV GET+V+GG+ + + V KVP LG++P +G+LFR + Sbjct: 629 NMLNGVPPINKNEVNAKILVNDGETIVIGGVFSNEQSKSVEKVPFLGELPYLGRLFRRDT 688 Query: 578 TERAKRNLMVFIRPTIIRDDDVY 600 K L+VF+ P I+ + + Sbjct: 689 VTDRKNELLVFLTPRIMNNQAIA 711 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 63/175 (36%), Gaps = 11/175 (6%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ NF + D+R ++++ ++ +VQG I++R + + +L Sbjct: 281 GEKLSLNFQDIDVRSVLQLIADFTDLNLVASDTVQGNITLRLQN-VPWDQALDL---VLK 336 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G L N L + + L ++ + A D+A L Sbjct: 337 TKGLDKRKLGNVLLVAPADEIAARERQELEAQKQIAELAPLRRELIQVNYAKAADIAKLF 396 Query: 145 RQMMD-------AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 + + G G++ + +N +I +++L ++ ++D+ + Sbjct: 397 QSVTSDGGQEGKEGGRGSITVDDRTNSIIAYQPQERLDELRRIVSQLDIPVRQVM 451 >UniRef50_Q9I3W2 Probable type II secretion system protein n=1 Tax=Pseudomonas aeruginosa RepID=Q9I3W2_PSEAE Length = 759 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 126/664 (18%), Positives = 253/664 (38%), Gaps = 107/664 (16%) Query: 25 NEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQ---GTISVRSNDTFSQQEYYQFFL 80 N + + F+ E+ G LG I+ +++ ++VR + Q Y+ Sbjct: 100 KADISLNVEDVQLAAFINEVFGNILGLPFEIESALKEKTDRVTVRLEQPQTAQMVYEVAR 159 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTS--PGMIADSSRP--GVGDELVTRIVPLENVP 136 +L YG ++ + + ++ + P +I+ +RP + V + V L +V Sbjct: 160 QVLVNYGVEILHQGDIYRFQIKQVGLSPDEPPILISGEARPSVPIAYRPVFQFVALHSVD 219 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 +D+ P L + + +V+ + L+L G +S +N+ E ++ +D + + Sbjct: 220 PKDVIPWLNSAYEKSGL-SVMADGARSGLMLKGMSSIVNQATEAVRLLDQPFMRGRHSLR 278 Query: 197 LE--YASAEDLAEILNQLIS-ESHGKSQMPALLSAKIVADKRTNSLIISGPE-KARQRIT 252 ++ + SA D+A L +I+ + + A+ S +V + +N LI+ + + + Sbjct: 279 IDPAFVSAADMASQLKTVIAAQGYSVGIGEAVGSIMLVPLESSNGLIVFANDGQLLDLVR 338 Query: 253 SLLKSLDVEE--------SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS- 303 + +D E+ Y + + T L + L + E Sbjct: 339 EWAQQVDRAPMAVAAGIGEEKEGLFFYEARNTRVTELAKSLRALVSGFAGEGAYGITSGL 398 Query: 304 ------------------------------------------------SSGAMDNVAITA 315 ++G + I Sbjct: 399 QSSASKRSGGGRRAGDDGAAPAVAPLLQAAGAAALVGGDGANGLLGGLAAGISGSGTIVE 458 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 DE N+++ +++ ++ +D QVL+E + V + LGV+W N Sbjct: 459 DENRNAILFRGAARTWQQMQGLLREMDKPARQVLIEVTVASVSLSDTQELGVEWEMLNGS 518 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 T+TG G G + + A+A Sbjct: 519 FNSATSTGSKGSAGKGGFNYVINTAGGNT------------------------AAIQAMA 554 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG-----SQTTSGDNVFNTVERKTVGTK 490 N + +LATP I+ + A+ NVG+D+P+ + S T N+ N + ++ GT Sbjct: 555 DNQRVRVLATPRILVKSGEQANINVGRDIPIPTAQVNDDSTTAGSTNLRNEIAYRSTGTI 614 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL--------GPTFNTRTIQNAVLVKTGET 542 L V P V V L + QE+S SS P + +++ ++ +K+G + Sbjct: 615 LNVAPVVYSDSRVDLTVSQELSDSGGSSGGGGKASGGGISAPEISRTSLETSLTLKSGGS 674 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRS 602 V++GGL+ D + + VPLL DIP +G LF + + +++ I+P ++ D R Sbjct: 675 VLMGGLIRDNITDSNAGVPLLKDIPGIGFLFGRQKAVKTREEVIMLIQPYVLESDADARE 734 Query: 603 LSKE 606 ++++ Sbjct: 735 VTEK 738 >UniRef50_A4A5L7 General secretion (Type II) pathway protein D n=3 Tax=unclassified Gammaproteobacteria RepID=A4A5L7_9GAMM Length = 745 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 130/517 (25%), Positives = 226/517 (43%), Gaps = 35/517 (6%) Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVG--------NVVHYEPSN-VLILTGRASTI 174 + + PLEN + + +MDA V+ E N +L++T RA + Sbjct: 240 GMSVGMFPLENSSVNETMEAIETLMDATGGEEGGISGIVRVLPMERLNSILVVTPRAHYL 299 Query: 175 NKLIEVIKRVDVIGTEKQQ----IIHLEYASAEDLAEILNQLISESHG----KSQMPALL 226 +++ + I+R DV + + + ++ +A LA++LN + + + Q + Sbjct: 300 DRVGDWIQRFDVDPDARFEKRLYVYPVQNTTATRLAQLLNSIYAGGNAGAAGTRQSSGAI 359 Query: 227 SAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT 286 + + ISG + S + + T + Sbjct: 360 GDQAAVAPGLSPESISGGGSSVFGGASGDAGDGSTMGGSNSASNTGSFGSGGTGSGQGAR 419 Query: 287 GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 + + + +V + ADE+ N+L+I AD + + +LD+ Sbjct: 420 AAATAMTSVNMGTTGAGQISPLADVRVVADEENNALMIYADGKQYGIVKDALKQLDVVAT 479 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QV++EA I+EVQ + L G++W KN + G AA A + +T++ Sbjct: 480 QVIIEASIMEVQLIDELRYGLEWTFKNGLGNNYDGLGTLAAGAAGPAAAAGFSYTVTNS- 538 Query: 407 PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 GD +L AL+ + +++++PS++ LDN A +VG VPV Sbjct: 539 -----------------LGDISAVLNALSEESLINVISSPSVMVLDNHTAFISVGDQVPV 581 Query: 467 LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF 526 L G T+G N + + G +L V P VN G V ++IEQ V V S ++T F Sbjct: 582 LQGQTITNGGNSVQNITYRDTGVQLSVRPSVNAGGLVTMDIEQSVIDVGSIDSATGQRAF 641 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 RTI + V V++ E+VVLGGL+ + S S VP+L +IPL G LF T+T+ + L+ Sbjct: 642 LDRTINSRVAVRSSESVVLGGLIRENSSLGDSGVPILREIPLFGSLFGTTTTDSRRTELL 701 Query: 587 VFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKS 623 V I P + +++ R++S E + R + R +S Sbjct: 702 VIITPRALYNEEELRAVSDEMREQVRFMKLVRDPPRS 738 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 117/293 (39%), Gaps = 11/293 (3%) Query: 25 NEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + NF A + + V IVG L ++D +QG +++R+ + E S+L Sbjct: 77 GDDVSLNFEQAPLDEVVHAIVGDILQLDYIVDRPIQGKVTLRTRTPIPRNELLVVLESLL 136 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 + +I D+G + S + + G T ++PL+ + A+ +A + Sbjct: 137 KAHDALMIRGDDGRYLITGSQQAMNLRPDVTSADDIAAG--FSTMVIPLQYISAKAMASI 194 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQIIHLEYAS 201 L + + + V + +L++ G ++ +E++ DV + LE +S Sbjct: 195 LEPLAEKDAF--VRVDDTRALLMMAGTREQLSGWLEIVSTFDVDMLAGMSVGMFPLENSS 252 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK-ARQRITSLLKSLDV 260 + E + L+ ++ G + +++ +R NS+++ P R+ ++ DV Sbjct: 253 VNETMEAIETLM-DATGGEEGGISGIVRVLPMERLNSILVVTPRAHYLDRVGDWIQRFDV 311 Query: 261 EESE--EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV 311 + E VY ++ AT L ++L + R+ S + Sbjct: 312 DPDARFEKRLYVYPVQNTTATRLAQLLNSIYAGGNAGAAGTRQSSGAIGDQAA 364 >UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisseriaceae RepID=C0DV38_EIKCO Length = 707 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 97/380 (25%), Positives = 174/380 (45%), Gaps = 15/380 (3%) Query: 220 SQMPALLSAKIVADKRTNSLIISGPEKARQRI--TSLLKSLDVEESEEGNTRVYYLKYAK 277 + ++ ++ + +R ++I P + ++I +L + +EE +R + LKY Sbjct: 335 QALDLVMQSRGLESRRNGNIIRVAPAEEFRKIDVETLENAKRIEELGPLVSRTFQLKYKD 394 Query: 278 ATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATV 337 ++L GN S + D TN+L+I +Q+V ++ + Sbjct: 395 VNEFRKILNISDTGSSGGSGNNNNTLLS---SRGSAVIDPATNTLIIKDNQNVIKEFERL 451 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 I +LD+ QV++EA IVE DG LGV++ +GL A Sbjct: 452 IEQLDVPARQVMIEARIVEANDGFSRALGVKFGYNKTSGSTRIGSGLGSGGANGNTFSIA 511 Query: 398 KNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 N + + + + + +G G+ LTA+ N+ I+++P ++T D K A+ Sbjct: 512 PNVNLPAISATSSIT-----IVRALSSGALGLELTAMQEQNRGKIISSPRVLTQDRKEAT 566 Query: 458 FNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS 517 G+++P S + + K L VTPQ+ V+++I+ SVD + Sbjct: 567 IKAGREIPYQEASSSGATSTS-----FKEAVLGLTVTPQITPDGNVIMDIKLNKDSVDEN 621 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 + P NT+ + +V+ G T++LGG+ ++ + KVPLLGDIP+VG LFR T Sbjct: 622 CSVLGTPCINTKELVTRAMVEDGGTIILGGIYEEENSNSQYKVPLLGDIPVVGNLFRGTR 681 Query: 578 TERAKRNLMVFIRPTIIRDD 597 +K L++FI P I+ + Sbjct: 682 RNNSKNELLIFITPRIMGSE 701 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 67/184 (36%), Gaps = 23/184 (12%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ +F + D+R ++I+ + I+ SV G +++ S + ++ Sbjct: 287 GKRVSLDFQDVDVRTILQILAKESNMNIVASDSVSGKMTL-SLKDVPWDQALDL---VMQ 342 Query: 85 LYGYSVITLDNGFLKVVRSAN-VKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G + ++V + K + ++ R LV+R L+ + + Sbjct: 343 SRGLES-RRNGNIIRVAPAEEFRKIDVETLENAKRIEELGPLVSRTFQLKYKDVNEFRKI 401 Query: 144 LR---------------QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 L ++ S G+ V +N LI+ + I + +I+++DV Sbjct: 402 LNISDTGSSGGSGNNNNTLLS--SRGSAVIDPATNTLIIKDNQNVIKEFERLIEQLDVPA 459 Query: 189 TEKQ 192 + Sbjct: 460 RQVM 463 >UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=Chromobacterium group RepID=Q7NZU2_CHRVO Length = 697 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 111/525 (21%), Positives = 208/525 (39%), Gaps = 44/525 (8%) Query: 102 RSANVKTSPGMIADSSRPGVGDELVTRI------VPLENVPARDLAPLLRQMMDAGSVGN 155 + ++ D + + +LV R+ P+ V A +L +R + Sbjct: 181 PVDIRRDGANLVVDIAGASLPPQLVRRVDVTDFGTPVAKVDAANLGGNIRVTVIPQGDWE 240 Query: 156 VVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH----------------LEY 199 Y+ L++ R + + G + L Sbjct: 241 YSSYQTDGKLVVEVRRPALETAGGAAGKPQYKGDKLSLNFQNIEVRTVLQVIAEFTGLNV 300 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR--QRITSLLKS 257 +++ + + + + + +L +K + +R ++I P + Sbjct: 301 VTSDSVTGNITLRLKDVPWDQALDLILQSKGLDQRRNGNIIQIAPRDELLARDKQVQEAR 360 Query: 258 LDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADE 317 + E + + L+Y A + +VL G + K E S + ++ D Sbjct: 361 QQLATLEPLRSETFVLRYRSAEDFKKVLDGDNNSGKKE---------SLLSERGSVLIDP 411 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV--- 374 +TN+L++ + +K+ VI + DI QVL+EA IVE D +LG++ + Sbjct: 412 KTNTLIVNDIGTAIDKIRDVITKTDIPVKQVLIEARIVEATDNWERDLGIKLTYDRMDPK 471 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD---WGVLL 431 G G + N + T A + + Y ++A + G G+ L Sbjct: 472 GIISGNPLGTNVNNVTNLNNNQPYVIQTTPAGVNLPIATPYGTLSALYNVGHSVILGLEL 531 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKL 491 A+ + +K I+++P ++T D + AS G ++P S + + +V K +L Sbjct: 532 QAMQAEDKGRIISSPRVMTADRQEASIEQGTEIPYQEASSSGA-----TSVSFKKAVLRL 586 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDD 551 V PQ+ + V+++I S + P+ +T I VLV+ G TVVLGG+ Sbjct: 587 NVKPQITPDNHVIMDITVNKDSANFEKTVNGTPSLSTEKIITQVLVENGGTVVLGGIYQQ 646 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 + ++KVP LGDIPL+G LFR + + L++FI P +I D Sbjct: 647 QLNDVINKVPFLGDIPLLGALFRSSQKIDKRSELLIFITPKVIND 691 Score = 75.8 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 11/185 (5%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 L A + ++ NF N ++R ++++ + G ++ SV G I++R Sbjct: 258 ALETAGGAAGKPQYKGDKLSLNFQNIEVRTVLQVIAEFTGLNVVTSDSVTGNITLRL-KD 316 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 + IL G N R + + + + L + Sbjct: 317 VPWDQALDL---ILQSKGLDQRRNGNIIQIAPRDELLARDKQVQEARQQLATLEPLRSET 373 Query: 130 VPLENVPARDLAPLLRQMMDAG-------SVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 L A D +L ++G G+V+ +N LI+ + I+K+ +VI Sbjct: 374 FVLRYRSAEDFKKVLDGDNNSGKKESLLSERGSVLIDPKTNTLIVNDIGTAIDKIRDVIT 433 Query: 183 RVDVI 187 + D+ Sbjct: 434 KTDIP 438 >UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRB5_PSYIN Length = 689 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 121/534 (22%), Positives = 224/534 (41%), Gaps = 64/534 (11%) Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L+ G ++ LDN + V + + +IA+ + DEL+ + ++ A + Sbjct: 192 LEGQGKLLVYLDNSSIAV---DIRRRNNQLIAEFQSTYIPDELLYIMDVVDFATAVEKVE 248 Query: 143 LLRQMMDAGSVGNVV-----HYEPSNVLILTGRASTINKLIEV--------IKRVDVIGT 189 ++ + ++ Y+ + L + + + E + D+ Sbjct: 249 TFKEDGKTRLIFDIKDQYNYRYDQLDTLFMIEISEKLQDQKESAYQGKAISLNFQDIPVR 308 Query: 190 EKQQIIH----LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP- 244 Q+I + ++ + + + + + +L K + ++++ P Sbjct: 309 TVLQLIADFNGFNLVITDSVSGNITLRLDDVPWEQALDIILKVKGLGKSLDGNVLMIAPA 368 Query: 245 -EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS 303 E A ++ L V + + YAK ++ +L+ L E+G Sbjct: 369 VELAAKKREQLESENAVANLAPLYSEFIQVNYAKVADISAMLSSDKTSLLSERG------ 422 Query: 304 SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGL 363 A++ D +TN+L++ +V + + +I LDI QV++EA +V V D Sbjct: 423 --------AVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQVVIEARMVTVDDSVSE 474 Query: 364 NLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 LGV+W + + + + + PA D A F Sbjct: 475 ELGVKWGMTSTSSSTVDSLNVNL--------------------PATDAAGTIAFKLAKFS 514 Query: 424 NGD-WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTV 482 NGD + L+AL S NK +I+A+P I T + + A G ++P + + + + +V Sbjct: 515 NGDILDLELSALESENKAEIIASPRITTANQQTAYIEQGTEIPYVESASSGA-----TSV 569 Query: 483 ERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG--PTFNTRTIQNAVLVKTG 540 K L VTPQ+ + V+L++E +V + ++ G +T+ I VLV G Sbjct: 570 AFKKAVLSLTVTPQITPDNKVILDLEITQDTVGETVSAGTGEAVAIDTQKIGTQVLVGNG 629 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 ET+VLGG+ + VSKVPLLGDIP +G LFR T+ E K L++F+ P I+ Sbjct: 630 ETLVLGGIYQQRNSIAVSKVPLLGDIPYLGALFRSTNEENTKSELLIFVTPRIV 683 Score = 75.8 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 114/308 (37%), Gaps = 16/308 (5%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + + NF + +R ++++ G ++I SV G I++R +D ++ IL Sbjct: 294 QGKAISLNFQDIPVRTVLQLIADFNGFNLVITDSVSGNITLRLDD-VPWEQALDI---IL 349 Query: 84 DLYGYSVITLDNGFLKVVRSAN-VKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 + G +LD L + + + + L + + + D++ Sbjct: 350 KVKGLG-KSLDGNVLMIAPAVELAAKKREQLESENAVANLAPLYSEFIQVNYAKVADISA 408 Query: 143 LLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYA 200 +L + G V +N L++ A+ I+ + ++I+ +D+ +Q +I Sbjct: 409 MLSSDKTSLLSERGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIP--VRQVVIEARMV 466 Query: 201 SAED-LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD 259 + +D ++E L + S L+ + A ++ + + I L L Sbjct: 467 TVDDSVSEELGVKWGMTSTSSSTVDSLNVNLPATDAAGTIAFKLAKFSNGDILDLE--LS 524 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 ESE + + A + +E E ++ S + +++T Q Sbjct: 525 ALESENKAEIIASPRITTANQQTAYIEQGTEIPYVESASSGATSVAFKKAVLSLTVTPQI 584 Query: 320 ---NSLVI 324 N +++ Sbjct: 585 TPDNKVIL 592 >UniRef50_D2L502 Type II and III secretion system protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L502_9DELT Length = 542 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 127/626 (20%), Positives = 248/626 (39%), Gaps = 108/626 (17%) Query: 8 TCCLLAALLMPCAGHA---ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISV 64 +L + ++ CA + E+ NF + D+ ++ Sbjct: 16 LVLMLISPILVCAAKGNSDQGERIELNFRDTDVLAVLQFYA------------------- 56 Query: 65 RSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDE 124 +L G + I ++ KV Sbjct: 57 -------------------ELLGKTFIPAEDLTGKVT----------------------- 74 Query: 125 LVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 ++ V + LL ++D V N + + I Sbjct: 75 ----VIASSPVTREEAKRLLFSILDVKGFSVVEMD---NAYKVIKKKDAIASAGIKGGGG 127 Query: 185 DVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 ++ + ++ A+++ E L +++S A I A N +++ Sbjct: 128 HGSDQVFTEVFYFKHIPAKNVVEDLRKVLSPE-----------ASIFAGTDGNYVVVGDK 176 Query: 245 EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS 304 E ++ ++ +D + T Y+L+Y A +VL G+ K Sbjct: 177 ETNIIKLRGIIAKIDSPSFAQ-VTISYHLQYLMAAATAKVL-----------GDIFKKDG 224 Query: 305 SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN 364 ++ I + +N++V+TA + Q ++A ++A +D R QV + A++VEV Sbjct: 225 KDGSASLQILPLKGSNTVVVTALPAAQSQVANILANMDKRTPQVSISAMLVEVILDESSK 284 Query: 365 LGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN 424 +G+ W + + + N AQ G SA+ +S AA FFN Sbjct: 285 MGLDWKLRAWSSNKAYN------EFAQDTLAKTLETGSQSASANLAKYSDAGTKAAMFFN 338 Query: 425 ----GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN 480 G +L+ ++S+ IL++P ++ DN+ AS ++G+++P+L +T + ++ Sbjct: 339 IFPGGYLSMLVHMISSDTNAKILSSPHLLVADNQEASISLGREIPILKEYRTDTNNDPIK 398 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTG 540 T ++T G +LK+TP + + V L++ Q++S++D + + RT V+V Sbjct: 399 TYSQRTFGLELKMTPTIADNGDVTLKVSQKLSNLDEQDTTNDTYKASERTADTTVVVHDK 458 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 +T+V+GGL +++ S P IP++G LF ST + KR L++FI PT++RD Sbjct: 459 QTLVIGGLTMQTDEKEDSGTPTARKIPVLGYLFGTKSTSKQKRELLLFITPTVVRDPIQA 518 Query: 601 RSLSKEKYTRYRQEQQQRIDGKSKAL 626 ++S E Y++E+ ID Sbjct: 519 DAMSVE----YKEEKPMLIDQSGLEF 540 >UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderiales RepID=A1VK17_POLNA Length = 712 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 100/408 (24%), Positives = 183/408 (44%), Gaps = 25/408 (6%) Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDV 260 + + + + + + +L AK + ++T ++++ P E A + L + + Sbjct: 321 DTVTGSVTLRLKDVPWDQALDIILQAKGLGMRKTGNVLLIAPKDELAAKDKQELEARVAI 380 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTN 320 + E T+ + + YAKA+ + ++ G ++ + ++ A+ +TN Sbjct: 381 QNLEAVRTQSFQINYAKASEIAVQISA---------GGTGATTARILSNRGSVIAEPRTN 431 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF- 379 L +T S E++ IA+LDI QVL+EA IVE D G +LGV+ +GA Sbjct: 432 QLFVTDIPSRLEQVQNFIAKLDIAVRQVLIEARIVEASDTFGRSLGVRLGGGTIGAAGAL 491 Query: 380 --TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD----WGVLLTA 433 NT + + ++ + +A + A FN + L+A Sbjct: 492 TRGNTNVSLGTNYGATVADTSGNFVSFPASTLGVANAASSFAVSIFNASANRFLNLELSA 551 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 L ++ K I+++P +VT D A G + P + + + + ++ + KL+V Sbjct: 552 LEADGKGKIVSSPRVVTADQTKALIEQGTEFPYQTATSSGA-----TSLAFRKANLKLEV 606 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 TPQ+ ++L+++ S + G +T+ IQ VLV+ G TVV+GG+ Sbjct: 607 TPQITPEGNIILDLDVNKDS--RGETTAAGIAIDTKHIQTQVLVENGGTVVIGGIFTLEE 664 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 KVPLLGD+P +G LF+ K+ ++VFI P +I D R Sbjct: 665 TNNEVKVPLLGDVPYLGNLFKSRERTSRKQEMLVFITPKMITDRASAR 712 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 60/171 (35%), Gaps = 11/171 (6%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+ NF N +IR ++++ ++ +V G++++R + IL Sbjct: 289 NGEKLSLNFQNIEIRSLLQVIADFTNFNVVTSDTVTGSVTLRL-KDVPWDQALDI---IL 344 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G + N L + + + + T+ + A ++A Sbjct: 345 QAKGLGMRKTGNVLLIAPKDELAAKDKQELEARVAIQNLEAVRTQSFQINYAKASEIAVQ 404 Query: 144 LRQMMDAG-------SVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 + + G+V+ +N L +T S + ++ I ++D+ Sbjct: 405 ISAGGTGATTARILSNRGSVIAEPRTNQLFVTDIPSRLEQVQNFIAKLDIA 455 >UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteobacteria RepID=A1TYV8_MARAV Length = 704 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 94/412 (22%), Positives = 178/412 (43%), Gaps = 33/412 (8%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ + + + + +L K + ++ ++++ P E A + L Sbjct: 312 LNLVASDTVGGSITLRLQNVPWDQALDLILKTKGLDKRQIGNVLLVAPAEEIAAREKLEL 371 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 + + E + + YAKA ++V ++ E + ++ Sbjct: 372 ETNKQIAELAPVRLDIIQVNYAKAADVVALIQADEELISS---------------RGFVS 416 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK-- 372 +D +TN++ + E++ +++ D+ QV +EA IV Q +LGV+W Sbjct: 417 SDARTNTISVRETAEKLEEIRRLVSTWDVPVRQVSIEARIVRAQTNVAEDLGVRWGGAAY 476 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWG---- 428 NV G + + S A + +G A F WG Sbjct: 477 NVDGDDVITVGGSLGTLQEARDAASGGSNTISFPGALGVDLGVSGDGASSFAIGWGSDDF 536 Query: 429 ---VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 + L+AL S+ + ++++ P +VT D + AS G+++P + + + + +E K Sbjct: 537 LVDLELSALESDGRAEVVSQPRVVTADRQTASIKSGEEIPYQEATSSGATN-----IEFK 591 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 L+VTPQ+ D +++++ V+ + P+ NT + VLV GETVVL Sbjct: 592 EAVLSLEVTPQITPDDKIIMDLV--VNQDSRGEVTAGIPSINTNEVTTQVLVANGETVVL 649 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 GG+ Q +K P LGDIP +G+LF+ T + L++FI P II++D Sbjct: 650 GGIFQSEVATQTTKTPFLGDIPYLGRLFKRTEHIDERSELLIFITPKIIKND 701 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 8/185 (4%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ NF + ++R ++++ G ++ +V G+I++R + + IL Sbjct: 287 GEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVGGSITLRLQN-VPWDQALDL---ILK 342 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G + N L + + + + I+ + A D+ L+ Sbjct: 343 TKGLDKRQIGNVLLVAPAEEIAAREKLELETNKQIAELAPVRLDIIQVNYAKAADVVALI 402 Query: 145 RQMMD-AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQQIIHLEYA 200 + + S G V +N + + A + ++ ++ DV + + +I+ + Sbjct: 403 QADEELISSRGFVSSDARTNTISVRETAEKLEEIRRLVSTWDVPVRQVSIEARIVRAQTN 462 Query: 201 SAEDL 205 AEDL Sbjct: 463 VAEDL 467 >UniRef50_Q21H82 Type II and III secretion system protein n=11 Tax=Gammaproteobacteria RepID=Q21H82_SACD2 Length = 727 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 96/430 (22%), Positives = 180/430 (41%), Gaps = 34/430 (7%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ ++ + + + +L K + ++ S+++ P E A + + Sbjct: 300 LNLVASDTVSGSITLRLENVPWDQALDLVLKTKGLDKRQVGSVLMVAPAAEIAARERQEI 359 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVL------TGVSEKLKDEKGNARKPSSSGAM 308 ++E T ++YA A L + G+ R + S Sbjct: 360 ETQKQLQELAPLRTEYIRVRYANARELFNLFIDTSSGESGGAPGGSGSGSERNSTGSILS 419 Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 + DE+TNS+++T + + ++ R+DI QV++EA IV LGV+ Sbjct: 420 ERGQAIVDERTNSIILTDTEEKIDDFRRLVDRIDIPVRQVMIEARIVIANSDFRKELGVR 479 Query: 369 WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG-------------------ITSANPAW 409 A V +T + G+ +G + S+ Sbjct: 480 MAGDAVETSVSGDTKFEMTGRLTGLTAADGSGPEALFVDTDGDGVTDDERSLLDSSLVDL 539 Query: 410 DMFSAYNGMAAGFFNGDW--GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL 467 +F+ + ++ G+ L+AL ++ +I++ P ++T D + AS G ++P Sbjct: 540 GVFNPAGAFTWNVISSNFLLGMELSALENSGYAEIVSQPKVITGDKQKASIESGTEIPYQ 599 Query: 468 SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFN 527 S + T K KL+VTPQ+ + V++++ S+ S ++ P + Sbjct: 600 EESASGG-----TTTSFKEAVLKLEVTPQITPDNRVIMDLVINQDSISSIDANSGIPVID 654 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 ++ VLV GET+VLGG+ + +KVPLLGDIP VG+LFR KR +++ Sbjct: 655 ITQLETQVLVADGETIVLGGIYTTNTFTGETKVPLLGDIPFVGKLFRNDFKSEDKREILI 714 Query: 588 FIRPTIIRDD 597 FI P I+ + Sbjct: 715 FITPRIMASN 724 Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 59/190 (31%), Gaps = 26/190 (13%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ NF + +R ++++ ++ +V G+I++R + + +L Sbjct: 275 GDKLSLNFQDIQVRSVLQLIADFTDLNLVASDTVSGSITLRLEN-VPWDQALDL---VLK 330 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G + + + + I + L T + + AR+L L Sbjct: 331 TKGLDKRQVGSVLMVAPAAEIAARERQEIETQKQLQELAPLRTEYIRVRYANARELFNLF 390 Query: 145 RQMMDA----------------------GSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 G + E +N +ILT I+ ++ Sbjct: 391 IDTSSGESGGAPGGSGSGSERNSTGSILSERGQAIVDERTNSIILTDTEEKIDDFRRLVD 450 Query: 183 RVDVIGTEKQ 192 R+D+ + Sbjct: 451 RIDIPVRQVM 460 >UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular organisms RepID=B1Y305_LEPCP Length = 726 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 101/400 (25%), Positives = 174/400 (43%), Gaps = 32/400 (8%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 ++ AK + K+ +++ P E A + L + + E T+ + L Y KA +V Sbjct: 332 IMQAKSLGVKKAGNVLWIAPKDELAAKEKQELEARKQIADLEPLRTQSFQLNYTKAEEVV 391 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 + LTG + + + + +TN L ++ S E++A +IA++D Sbjct: 392 KSLTGQQQGSAGTGQGGN--VTRILSQRGSAAYESRTNQLFVSDLPSKLEEVAQMIAKID 449 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQ---------------WANKNVG---AQQFTNTGL 384 + QV++EA IVE +D G LGV+ W N +++ G Sbjct: 450 VPVRQVMIEARIVEAEDSFGRTLGVKLGATDLRGINGGVPGWGGNNTRIALGGNYSSIGD 509 Query: 385 PIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD----WGVLLTALASNNKN 440 A G AN + + A F + L+AL + K Sbjct: 510 TTLQQATGSIYANSQFVNLPANTSSLGGATAATFALSLFGASSNRFLNLELSALEAEGKG 569 Query: 441 DILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEG 500 ++++P +VT D A G ++P QT ++ + KL+VTPQ+ Sbjct: 570 KLVSSPRVVTADQVKALIEQGTELPY----QTGGNQQTAPSIAFRKATLKLEVTPQITPE 625 Query: 501 DAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 ++++++ SV + G NT+ ++ VLV+ G TVV+GG+ + E V+KV Sbjct: 626 GNIIMDVDVNKDSVGQQT--LAGFAINTKHVKTQVLVENGGTVVIGGIFETTETESVNKV 683 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 P+LGDIP +G LFR + K L+VF+ P +I D + Sbjct: 684 PVLGDIPFLGVLFRNKTRVANKTELLVFLTPKVITDRNTA 723 Score = 65.0 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 66/194 (34%), Gaps = 20/194 (10%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ NF + ++R ++++ I+ SV G +++R + I+ Sbjct: 279 GDKLSLNFQSIEVRSLLQVIADFTNFNIVTSDSVTGNVTLRL-KDVPWDQALDI---IMQ 334 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 V N + + + + L T+ L A ++ L Sbjct: 335 AKSLGVKKAGNVLWIAPKDELAAKEKQELEARKQIADLEPLRTQSFQLNYTKAEEVVKSL 394 Query: 145 ----RQMMDAGSVGNVVHY----------EPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 + G GNV +N L ++ S + ++ ++I ++DV Sbjct: 395 TGQQQGSAGTGQGGNVTRILSQRGSAAYESRTNQLFVSDLPSKLEEVAQMIAKIDVP--V 452 Query: 191 KQQIIHLEYASAED 204 +Q +I AED Sbjct: 453 RQVMIEARIVEAED 466 >UniRef50_Q5SII6 General secretion pathway protein (PilQ) n=5 Tax=Bacteria RepID=Q5SII6_THET8 Length = 757 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 124/561 (22%), Positives = 213/561 (37%), Gaps = 67/561 (11%) Query: 56 PSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVR-SANVKTSPGMIA 114 P V+ T ++ + E F S L SV+ + V+ + ++ Sbjct: 250 PRVEKTYTL---TYATFPELLAFLQSRLPEAQISVVPTNPQRAIVLATEEDHARLSELLK 306 Query: 115 DSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSN--VLILTGRAS 172 + P V R+ L+N+ + L+ +++ G + P N L+L + Sbjct: 307 TADVPKT----VRRVYALQNLTFAEAQERLKPLLEKDLKGARLESLPGNPKALLLEAPEA 362 Query: 173 TINKLIEVIKRVDVIGTEKQ--------QIIHLEYASAEDLAEILNQLISESHGKSQMPA 224 E++K +DV Q ++ L YA+AE +A L + ++P Sbjct: 363 EHALFAEILKALDVPPQAPQAPQEATLRRLYPLRYANAEQVAPFLAR---------EVPG 413 Query: 225 LLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNT--RVYYLKYAKATNLV 282 ++ + L + G EK + SLL +D + R Y L AKA L Sbjct: 414 IVVQTVPGQP---VLSVRGTEKQLAEVESLLAQIDRAPEQGPPVFQRAYQLSNAKAVELA 470 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 +VL + + + + + + + AD +TN+L++T Q + +I +LD Sbjct: 471 QVLQEALKARQAQN--QGQQNQALPTREATVVADPRTNTLIVTGTQEDLALVEGLIPKLD 528 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGI 402 QV + I EVQ +LG++W + GG Sbjct: 529 QPVPQVSLRVRIQEVQSNLTRSLGLKWNS--------------------------IAGGN 562 Query: 403 TSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 +A+ S + L AL + L + L+N+ A G+ Sbjct: 563 VAASILDSGLSLIFDSTRSLAALNIMATLDALQQQGLSRALRDVNQTVLNNQTARLQSGE 622 Query: 463 DVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS-SVDSSSNST 521 + F VG ++VTPQ+ +LL I+ E+S +V + Sbjct: 623 TFFIRRVVNDQVERVPF------DVGLIVEVTPQITADGQILLNIKAEISGNVQRNPVDG 676 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 F + + + VK GETVVLGGL S + VPLL DIPL+G+LF+ + E Sbjct: 677 DVDRFTKQVVTTTLRVKDGETVVLGGLTSQESNQSQQGVPLLMDIPLIGELFKQRTNEST 736 Query: 582 KRNLMVFIRPTIIRDDDVYRS 602 + L+V I I+++ Sbjct: 737 DKELLVVITADILKETASANP 757 >UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella RepID=A8GZ28_SHEPA Length = 688 Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats. Identities = 105/400 (26%), Positives = 188/400 (47%), Gaps = 25/400 (6%) Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDV 260 + + + + + + +L AK + + ++++ P E A + L +V Sbjct: 306 DTVEGDITLRLDDVPWDQALDLILQAKGLDKRIEGNILMVAPIEEIAIRESQELKNMQEV 365 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTN 320 +E + + YAKA ++ +L G L +G ++ DE+TN Sbjct: 366 KELAPLYSEYLQINYAKAVDIAALLKGEDSSLLTSRG--------------SVAVDERTN 411 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 +L++ + E + +I LDI QVL+EA +V V+D +LGV+W + + T Sbjct: 412 TLLVKDTEETLENIHRLIEVLDIPIKQVLIEARMVTVKDDVSEDLGVRWGVTDQQGDKGT 471 Query: 381 NTGL-PIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-WGVLLTALASNN 438 + L + A G+ + + A ++ A +G + L+AL N Sbjct: 472 SGSLEGAGDIANGIVPSLSDRLNVNLPAAVANPTSIAFHVAKLADGTVLDLELSALEQEN 531 Query: 439 KNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVN 498 K +I+A+P I T + K A G ++P + S + + TV K L+VTPQ+ Sbjct: 532 KGEIIASPRITTSNQKAAFIEQGVEIPYVEASSSGA-----TTVTFKKAVLSLRVTPQIT 586 Query: 499 EGDAVLLEIEQEVSSVDSSSNSTLG--PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQ 556 + V+L++E S + ++ G + +T+ I VLV GET+VLGG+ + Sbjct: 587 PDNRVILDLEITQDSQGKTVDTPTGQAVSIDTQRIGTQVLVDHGETIVLGGIYQQQLISR 646 Query: 557 VSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 VSKVP+LGDIP +G +FR TS + ++ L++F+ P I+ + Sbjct: 647 VSKVPILGDIPYLGFMFRSTSDKNERQELLIFVTPKIVSE 686 Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 81/231 (35%), Gaps = 13/231 (5%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + NF N +R ++I+ + ++ +V+G I++R +D + IL Sbjct: 274 DGRSLSLNFQNISVRTVLQIIADYNNFNLVTSDTVEGDITLRLDD-VPWDQALDL---IL 329 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G N + + + L + + + A D+A L Sbjct: 330 QAKGLDKRIEGNILMVAPIEEIAIRESQELKNMQEVKELAPLYSEYLQINYAKAVDIAAL 389 Query: 144 LRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQQIIHLE 198 L+ + S G+V E +N L++ T+ + +I+ +D+ + + +++ ++ Sbjct: 390 LKGEDSSLLTSRGSVAVDERTNTLLVKDTEETLENIHRLIEVLDIPIKQVLIEARMVTVK 449 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 +D++E L + + S + D + Sbjct: 450 ----DDVSEDLGVRWGVTDQQGDKGTSGSLEGAGDIANGIVPSLSDRLNVN 496 >UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legionella longbeachae D-4968 RepID=D1RGV5_LEGLO Length = 701 Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats. Identities = 87/403 (21%), Positives = 169/403 (41%), Gaps = 27/403 (6%) Query: 220 SQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV--EESEEGNTRVYYLKYAK 277 + +L + +A ++ ++++ +K+ + + E + + + YAK Sbjct: 318 QALDIILKTQGLAQRQNGNVMVIDTQKSFNDMEEQQLKSQHKIQRLEPVRSELIQINYAK 377 Query: 278 ATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATV 337 AT+L ++ L +KG ++ D +TN++ I S +++ + Sbjct: 378 ATDLAILIKDRQNSLLSDKG--------------KVSVDTRTNTIWIQDSGSRVDEVRKL 423 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 I LD+ QVL+EA IVEV +LG++W T G AD Sbjct: 424 IKELDVPVKQVLIEARIVEVTKDFAQDLGIRWGVSKPQHLSGTLAGANQLAQGVAPADVT 483 Query: 398 KNGGITSANPAWDMFSAYNGMAAGFFNGDWG------VLLTALASNNKNDILATPSIVTL 451 + + + N G G + L+AL S +++++P ++T Sbjct: 484 PFTDRLNLDLVAAPLTKANPATVGIALAQLGDNILLDLELSALESEGLAELISSPRLITA 543 Query: 452 DNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 + + A + GQ++P + + + V K LKV PQ+ + +L++++ Sbjct: 544 NQQPALIDSGQEIPYQQSTSSGA-----TAVAFKKAVLSLKVIPQITPDNKILMDLKINQ 598 Query: 512 SSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 + P T+ IQ VLV G+T+VLGG+ + +++VP G +P+VG Sbjct: 599 DLALPNQTYNGVPAIATKEIQTNVLVSNGQTIVLGGIYQQDKSKTITRVPFFGQLPVVGN 658 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQE 614 LF+ T L++FI P II + ++ R+ ++ Sbjct: 659 LFKNTQIGVHNDELLIFITPKIITNSLSITTIEGRNPVRFDEK 701 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 109/304 (35%), Gaps = 16/304 (5%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + NF N IR ++++ G I+ VQG I++R N+ + IL Sbjct: 269 SGRRISLNFQNISIRSVLQLLADFTGINIVASDRVQGNITLRLNN-IPWDQALDI---IL 324 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G + N + + + + + + + + ++ + A DLA L Sbjct: 325 KTQGLAQRQNGNVMVIDTQKSFNDMEEQQLKSQHKIQRLEPVRSELIQINYAKATDLAIL 384 Query: 144 L--RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQQIIHLE 198 + RQ G V +N + + S ++++ ++IK +DV + + +I+ + Sbjct: 385 IKDRQNSLLSDKGKVSVDTRTNTIWIQDSGSRVDEVRKLIKELDVPVKQVLIEARIVEVT 444 Query: 199 YASAEDL-----AEILNQLISESHGKSQMPALLSAKIVAD--KRTNSLIISGPEKARQRI 251 A+DL L G +Q+ ++ V R N +++ P Sbjct: 445 KDFAQDLGIRWGVSKPQHLSGTLAGANQLAQGVAPADVTPFTDRLNLDLVAAPLTKANPA 504 Query: 252 TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV 311 T + + ++ + + L+ L+ ++ + ++ + + Sbjct: 505 TVGIALAQLGDNILLDLELSALESEGLAELISSPRLITANQQPALIDSGQEIPYQQSTSS 564 Query: 312 AITA 315 TA Sbjct: 565 GATA 568 >UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7T3_CHRVI Length = 787 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 99/460 (21%), Positives = 200/460 (43%), Gaps = 60/460 (13%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ + + + + +L K +A ++ ++++ P E A Q + Sbjct: 333 LNLVASDTVGGNITLRLKNVPWDQALDIILKTKGLAMRQNGNVLMVAPAQELAAQEQLEM 392 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG-NARKPSSSGAMDNV-- 311 +EE T + YAKA ++ VL+G + +AR+ ++ D V Sbjct: 393 ESMQKIEELAPLRTEFIQVNYAKAADIAAVLSGAGRAASNPASPDARQTGTATRRDQVGA 452 Query: 312 ----------------------AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 ++T DE+TN+L++ + E++ V+ LD+ QV+ Sbjct: 453 SGLAQVAAAAGVSDRGILSPRGSLTFDERTNTLIVQDTLTALEEVRRVVNLLDVAVRQVM 512 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN------------------TGLPIFNAAQ 391 +E+ +V + +LGV++ + N +G NA+ Sbjct: 513 IESRVVIANNSFARDLGVRFGVSGSMGKVGDNEVLIGGGQNGYLAVGDYDSGPFGLNAST 572 Query: 392 G------VADYKKNGGITSANPAWDMFSAYNG----MAAGFFNGDWGVLLTALASNNKND 441 G + D N + + PA + A +G + + + L+A+ + + Sbjct: 573 GTPYNSTLTDDAGNATLITNLPATTIQDAASGSIDFLIGKVGSYLIQLELSAMQREGRGE 632 Query: 442 ILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGD 501 I+++P ++T D A+ VG ++P S + ++ K +L VTPQ+ D Sbjct: 633 IISSPRVITADKNKATIKVGSEIPYQEQSGQGN-----TSIAFKEAVLQLDVTPQITPDD 687 Query: 502 AVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVP 561 +++++E D S + P +TR+++ V++ GETVVLGG+ + +VP Sbjct: 688 RIIMDLEVRKDRPDWSRSINNTPPIDTRSVKTNVVIDNGETVVLGGVFEREKTFSKEQVP 747 Query: 562 LLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 LGD+P++G+LF+ + + + L++F+ P I++ D V R Sbjct: 748 WLGDVPVLGRLFKQEARQDSNTELLIFVTPKILKSDLVER 787 >UniRef50_Q7UX59 General secretion pathway protein D [Precursor] n=1 Tax=Rhodopirellula baltica RepID=Q7UX59_RHOBA Length = 1265 Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 122/614 (19%), Positives = 232/614 (37%), Gaps = 97/614 (15%) Query: 95 NGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR--------- 145 N + ++ ++ + + ++ PL N A D+ +L+ Sbjct: 455 NSLIVSASPRDLAEVTRLVEEIDVQKIPSTAEIKVFPLTNARAEDMVEVLQEAISGEPEN 514 Query: 146 ------------QMMDAGSVGN------------VVHYEPSNVLILTGRASTINKLIEVI 181 ++ S GN + N +++ A + + E+I Sbjct: 515 IAGDTTAAATSLSIVSLNSPGNPILDSGILNGAVITADSNVNAVVVRAPAGGMPLIGELI 574 Query: 182 KRVDVIGTEK--QQIIHLEYASAEDLAEILNQLISESHGKSQMP---------------- 223 +++D ++ +E A L L L + + Sbjct: 575 RQLDQTPGIDSLVKVFTIENGDATQLTTALQNLFGDDAATNGTSVGAGNLGELPSLSASE 634 Query: 224 -ALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 AL D RTNS+I SG + + + S+L LD E E T V +LK+ A N+ Sbjct: 635 SALTPLVFSTDIRTNSIIASGSAEDLEVVESILLRLDSEGFAERITEVIWLKHQIAENVA 694 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAM-----DNVAITADEQTNSLVITADQSVQEKLATV 337 +T + + N + ++ A+ QTNS++++ + E++ + Sbjct: 695 LAITNYVSQRAQSRNNITQFQQGLGPLDLPDRDIVAVAEAQTNSVLLSVSPRIYEEVRQL 754 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK--------------------NVGAQ 377 I RLD R VL++ +I EVQ +G +G ++ + + Sbjct: 755 IDRLDRRPPMVLIKTLIAEVQLDDGFEIGGEFGLQDSLLFDRGKATGAIATGNPASDPGF 814 Query: 378 QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF-----NGDWGVLLT 432 F T + + NA + + GITS + +G+ +G F + + L Sbjct: 815 NFGGTSVNLPNANSFGQENLASKGITSFGAGASQLTQLSGLNSGGFVFSAASESVNLFLR 874 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT-----VERKTV 487 L N+ IL+ P I+T DN VGQ P + T G + +E + + Sbjct: 875 TLRVANRLQILSRPEIMTADNTEGFVQVGQSFPRPTELSFTGGTGGTASQPIIGIEDEEI 934 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG----------PTFNTRTIQNAVLV 537 G L+VTP+V + + I+ S ++++ +G P + Q + Sbjct: 935 GIILRVTPRVGADGMIFMAIDASRSDINNNEGQIIGAFQDDVPIFVPAIDRTQAQATITA 994 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 G+TVV GGL+ + + +VP L +IP+VG F++ S + L+V + P ++ Sbjct: 995 FDGQTVVFGGLIQKVRQNRTRRVPYLSNIPVVGTFFKFDSEIEQRSELLVVMTPILVTGH 1054 Query: 598 DVYRSLSKEKYTRY 611 + + + + +R Sbjct: 1055 EDLEYVKQVESSRM 1068 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 92/194 (47%), Gaps = 11/194 (5%) Query: 155 NVVHYEPSNVLILTGRASTINKLIEVIKRVD---VIGTEKQQIIHLEYASAEDLAEILNQ 211 + S ++I+ G I ++++++K ++ + + ++ L++A + +A +L Q Sbjct: 295 EIQFVPESGLIIVKGNKRDIQRVMDIVKDIEEKSKLTQPEIEVRQLQHADSNAVAALLTQ 354 Query: 212 LISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVY 271 L + Q I A N+L++ G ++A + + L++ +D E RV+ Sbjct: 355 LYEDVLSARQG----DVSITALDSPNALLLIGRKEAIEAVNDLIEKIDQPIPETDRLRVF 410 Query: 272 YLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQ 331 L++A AT+ + + + + + G V I+AD +TNSL+++A Sbjct: 411 RLQHASATDAEATI----QTFFTNQPGGDEENRPGLGVRVRISADYRTNSLIVSASPRDL 466 Query: 332 EKLATVIARLDIRR 345 ++ ++ +D+++ Sbjct: 467 AEVTRLVEEIDVQK 480 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 116/320 (36%), Gaps = 53/320 (16%) Query: 74 EYYQFFLSILDLY-GYSVITLDNGFLKVVRSANVKTSPGMIADSSRP-GVGDELVTRIVP 131 + Y+ LS + + N L + R ++ +I +P D L R+ Sbjct: 354 QLYEDVLSARQGDVSITALDSPNALLLIGRKEAIEAVNDLIEKIDQPIPETDRL--RVFR 411 Query: 132 LENVPARDLAPLLRQMMDAGSVGN------------VVHYEPSNVLILTGRASTINKLIE 179 L++ A D ++ G+ + +N LI++ + ++ Sbjct: 412 LQHASATDAEATIQTFFTNQPGGDEENRPGLGVRVRISADYRTNSLIVSASPRDLAEVTR 471 Query: 180 VIKRVDV---IGTEKQQIIHLEYASAEDLAEILNQ------------------------L 212 +++ +DV T + ++ L A AED+ E+L + L Sbjct: 472 LVEEIDVQKIPSTAEIKVFPLTNARAEDMVEVLQEAISGEPENIAGDTTAAATSLSIVSL 531 Query: 213 ISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYY 272 S + L A I AD N++++ P I L++ LD + +V+ Sbjct: 532 NSPGNPILDSGILNGAVITADSNVNAVVVRAPAGGMPLIGELIRQLDQTPGIDSLVKVFT 591 Query: 273 LKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA----------ITADEQTNSL 322 ++ AT L L + G + + G + +++ + D +TNS+ Sbjct: 592 IENGDATQLTTALQNLFGDDAATNGTSVGAGNLGELPSLSASESALTPLVFSTDIRTNSI 651 Query: 323 VITADQSVQEKLATVIARLD 342 + + E + +++ RLD Sbjct: 652 IASGSAEDLEVVESILLRLD 671 Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 76/200 (38%), Gaps = 28/200 (14%) Query: 165 LILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS----------------AEDLAEI 208 ++ + S++ + I +++ +D + A + A Sbjct: 215 MLQHAKISSVQRAIRLLRDLDPKTGSGTSARPASNRTQPNFRTAAFQNEGGNAAPEGAAD 274 Query: 209 LNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE-SEEGN 267 + + G+ + +I + +I+ G ++ QR+ ++K ++ + + Sbjct: 275 VAAADPNAEGEDPAGPIGDPEIQFVPESGLIIVKGNKRDIQRVMDIVKDIEEKSKLTQPE 334 Query: 268 TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITAD 327 V L++A + + +LT + E + + +V+ITA + N+L++ Sbjct: 335 IEVRQLQHADSNAVAALLTQLYEDVLSAR-----------QGDVSITALDSPNALLLIGR 383 Query: 328 QSVQEKLATVIARLDIRRAQ 347 + E + +I ++D + Sbjct: 384 KEAIEAVNDLIEKIDQPIPE 403 >UniRef50_A7BUG3 Bacterial type II and III secretion system protein n=3 Tax=Gammaproteobacteria RepID=A7BUG3_9GAMM Length = 698 Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 103/503 (20%), Positives = 200/503 (39%), Gaps = 57/503 (11%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV---------- 180 + + + P + + G Y+ N ++ + I K+ E+ Sbjct: 214 QIHYIDTFPMGPHTKMKIAIGDQAEYHAYQTENTYVIEVKEKIIVKVDEIKIEDRKYEGQ 273 Query: 181 -----IKRVDVIGTEKQQI----IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIV 231 + +DV ++L +++ + + + + +L A+ + Sbjct: 274 LVSFNFQDIDVRAALTLLFDLPGVNLNMVASDVVKGSITLRLKNIPWDQALDIILEAREL 333 Query: 232 ADKRTNSLIISGPEKARQR--ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 ++ ++ + +K L ++E E T + YAKA ++ +L Sbjct: 334 GMRKIGNVAMIDLKKNIDERKQRELSNKKKIKELESLYTEFIRINYAKAKDIEALLRTSG 393 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 + S ++ DE+TN+L+I + ++ ++A LD QVL Sbjct: 394 QH-------------SFLSSRGNVSTDERTNTLIIQDTAAKIAEIRKLLAELDTPVRQVL 440 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN--- 406 +E+ IV + LGV++ F N G+ G + G +S N Sbjct: 441 IESRIVIANNNFSKALGVKFGYSANEDLGFGN-GIVFGGKKGGDTTFSGGTGFSSDNTAT 499 Query: 407 ------------PAWDMFSAYNGMAAGFFNGDW-GVLLTALASNNKNDILATPSIVTLDN 453 PA A G+A G + L+A+ S +I++ P I+T + Sbjct: 500 GEGQGENFIVSLPAAIANPAAVGLAIGKIGSYLLQLELSAMQSEGSGEIISNPRIITGNQ 559 Query: 454 KLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS 513 + A G ++P + +G V+ K +LKVTPQ+ D V +E+ + S Sbjct: 560 QEAIITQGTEIPYVQQ----AGVGSVAQVQFKQAVLELKVTPQITPDDRVNMELAVKKDS 615 Query: 514 VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLF 573 + L + + R ++ VLV GETVVLGG+ + ++++P D+PL+G+LF Sbjct: 616 PGVNIGGNL--SIDKREVKTNVLVDNGETVVLGGVYERTRSNAINRIPFFADLPLIGELF 673 Query: 574 RYTSTERAKRNLMVFIRPTIIRD 596 + S K L++F+ P I+++ Sbjct: 674 KNRSKSDDKSELLIFVTPKILKE 696 Score = 65.4 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 70/169 (41%), Gaps = 9/169 (5%) Query: 24 ENEQYGANFNNADIRQFVEIVGQH--LGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 E + NF + D+R + ++ + ++ V+G+I++R + Sbjct: 271 EGQLVSFNFQDIDVRAALTLLFDLPGVNLNMVASDVVKGSITLRL-KNIPWDQALDI--- 326 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 IL+ + + N + ++ + +++ + + L T + + A+D+ Sbjct: 327 ILEARELGMRKIGNVAMIDLKKNIDERKQRELSNKKKIKELESLYTEFIRINYAKAKDIE 386 Query: 142 PLLR---QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 LLR Q S GNV E +N LI+ A+ I ++ +++ +D Sbjct: 387 ALLRTSGQHSFLSSRGNVSTDERTNTLIIQDTAAKIAEIRKLLAELDTP 435 >UniRef50_Q60BY4 Fimbrial assembly protein PilQ n=1 Tax=Methylococcus capsulatus RepID=Q60BY4_METCA Length = 729 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 109/513 (21%), Positives = 185/513 (36%), Gaps = 48/513 (9%) Query: 100 VVRSANVKTSPGMI-ADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVH 158 V R A + +P D S G L + PL + N Sbjct: 242 VGRGARLLITPVSDEYDYSSYQSGKLLTVELRPLSRAEKEEAKKRRLVFAGERLSLNFQD 301 Query: 159 YEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHG 218 NVL + + +N ++ V G+ ++ + + A DL L ++ G Sbjct: 302 IPVRNVLQILADFTNLN----IVASDSVQGSVTLRLNEVPWDEALDLV-----LKAKGLG 352 Query: 219 KSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKA 278 K Q ++ N R L VE+ E T + + Y KA Sbjct: 353 KRQEANSNVIRVAPLDEIN----------RSERDELEALKVVEDLEPLRTEIIQINYTKA 402 Query: 279 TNLVEVLTGVSEK--------------LKDEKGNARKPSSSGAMDNVAITADEQTNSLVI 324 ++ +V+ G +EK A + S +T D +TN L++ Sbjct: 403 DDIKKVIMGTTEKAEKAITRPEALTGGPGVTSTEAYDVTQSILSSRGNVTTDPRTNQLIV 462 Query: 325 TADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG--VQWANKNVGAQQFTNT 382 E++ ++ +LD QV++E+ +V LG + + KN+ A + N Sbjct: 463 QDTPRNLERIRDLVRQLDKPVRQVMIESRVVIANVDFLRELGAKLDFRPKNLTAAERLNP 522 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDI 442 + + +A +A M + L+A + +I Sbjct: 523 TGSMADLGVDLAKLTTLSPYGTAQYVVSMGDYL-----------LDLELSAAQKEGRGEI 571 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDA 502 +A P ++T D A G ++P Q T G V K +L VTP + D Sbjct: 572 VANPRVLTADQSKAKIMQGVELPYQITQQGTGGGIPVQNVAFKPAVLELDVTPHITPDDH 631 Query: 503 VLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPL 562 +L+++ + R I V GETVVLGG+ + + KVP Sbjct: 632 ILMDLMVKKDD-KGELAPNGNFAIEKREIDTVAQVANGETVVLGGVYEGTRRNNTDKVPF 690 Query: 563 LGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 GD+P +G +FR + E K+ L++FI P I++ Sbjct: 691 FGDLPGIGFMFRRNAVEDRKKELLIFITPKIVK 723 Score = 78.9 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 69/195 (35%), Gaps = 36/195 (18%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ NF + +R ++I+ I+ SVQG++++R N+ E +L Sbjct: 292 GERLSLNFQDIPVRNVLQILADFTNLNIVASDSVQGSVTLRLNE-VPWDEALDL---VLK 347 Query: 85 LYGYS-VITLDNGFLKVVRSANV-KTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 G ++ ++V + ++ + + L T I+ + A D+ Sbjct: 348 AKGLGKRQEANSNVIRVAPLDEINRSERDELEALKVVEDLEPLRTEIIQINYTKADDIKK 407 Query: 143 LL--------RQMMDA----------------------GSVGNVVHYEPSNVLILTGRAS 172 ++ + + S GNV +N LI+ Sbjct: 408 VIMGTTEKAEKAITRPEALTGGPGVTSTEAYDVTQSILSSRGNVTTDPRTNQLIVQDTPR 467 Query: 173 TINKLIEVIKRVDVI 187 + ++ ++++++D Sbjct: 468 NLERIRDLVRQLDKP 482 >UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadaceae RepID=Q2P6L4_XANOM Length = 649 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 123/527 (23%), Positives = 211/527 (40%), Gaps = 68/527 (12%) Query: 114 ADSSRPGVGDELVTRIVPLEN------VPARDLAPLLRQMMDAGSVGNVVHY-----EPS 162 DS G+E V I P + V + Q+ G G V + Sbjct: 140 FDSLAYQTGNEYVVEITPRKGQPAVGGVSPAAVTQAAAQIAARGYSGRPVTFNFQDVPVR 199 Query: 163 NVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQM 222 VL L S +N ++ V G +++++ + A D+ Sbjct: 200 TVLQLIAEESNLN----IVASDTVQGNVTLRLMNVPWDQALDIV---------------- 239 Query: 223 PALLSAKIVADKRTNSLIISGPEKARQRITS--LLKSLDVEESEEGNTRVYYLKYAKATN 280 L AK + +R ++ P+ + + +E E+ T + Y A Sbjct: 240 ---LRAKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNAAV 296 Query: 281 LVEVLT--------GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQE 332 + + LT G S + +G A + + + ADE+TN+L+I+ Sbjct: 297 IFKALTEAKGIGGGGGSGGGQGGQGGAGQQDNGFLSPRGRLVADERTNTLMISDIPKKVA 356 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN----TGLPIFN 388 ++ +I+ +D QVL+E+ IV D +LG ++ + + + N Sbjct: 357 QMRELISHIDRPVDQVLIESRIVIATDTFARDLGARFGIIGATGRGILSGSLDSNTNYLN 416 Query: 389 AAQGVADYKKNGGITSANPAWDMFSAYN---GMAAGFF--------------NGDWGVLL 431 + A NGG ++ PA S N G GF N + + L Sbjct: 417 TSAKRASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTNTPGGLAYTLLGSNFNLDIEL 476 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKL 491 +A+ + ++++ P IVT + + G+++ ++ S + +G V+ K V +L Sbjct: 477 SAMQQEGRGEVVSNPRIVTANQREGVIKQGREIGYVTISGSGAGGGSQANVQFKEVLLEL 536 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSSN---STLGPTFNTRTIQNAVLVKTGETVVLGGL 548 KVTP + + V L + + V + P N R I AVLV GETVV+GG+ Sbjct: 537 KVTPTITNDNRVFLNMNVKKDEVARLIDLPLYGTVPEINRREINTAVLVGDGETVVIGGV 596 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 + +E VSKVP LGDIP +G LF+ + K L+VF+ P ++R Sbjct: 597 YEFTDRESVSKVPFLGDIPFLGNLFKKRGRSKEKAELLVFVTPKVLR 643 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 57/190 (30%), Gaps = 32/190 (16%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 NF + +R ++++ + I+ +VQG +++R + + +L Sbjct: 185 SGRPVTFNFQDVPVRTVLQLIAEESNLNIVASDTVQGNVTLRLMN-VPWDQALDI---VL 240 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G + K ++L+T V + A + Sbjct: 241 RAKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNAAVIFKA 300 Query: 144 LRQ--------------------------MMDAGSVGNVVHYEPSNVLILTGRASTINKL 177 L + + G +V E +N L+++ + ++ Sbjct: 301 LTEAKGIGGGGGSGGGQGGQGGAGQQDNGFLSP--RGRLVADERTNTLMISDIPKKVAQM 358 Query: 178 IEVIKRVDVI 187 E+I +D Sbjct: 359 RELISHIDRP 368 >UniRef50_B8KPH7 General secretion pathway protein D n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPH7_9GAMM Length = 770 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 131/513 (25%), Positives = 231/513 (45%), Gaps = 36/513 (7%) Query: 124 ELVTRIVPLENVPARDLAPLLRQMM--------DAGSVGNVVHYEPSN-VLILTGRASTI 174 + + PLEN + L +M D + V+ E N +L++T RA + Sbjct: 274 GMSVGMFPLENSSVEETLAALEALMEAAGGEEGDITGIVRVLPMERLNSILVVTPRAHYL 333 Query: 175 NKLIEVIKRVDVIGTEKQQ----IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKI 230 +++ I+R+DV + + + ++ +A LA++LN + + S +A Sbjct: 334 DRVGSWIERIDVDPDARFEKRLYVYPVQNTTATRLAQLLNSIYAGGAANSGGARQQNASR 393 Query: 231 VADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE 290 ++ P + + I + S G A + + + Sbjct: 394 TPGDQS----AVAPGLSPESIGGGISSGGAAGIGGGGGGSISGVGASGGSAGQGARAAAV 449 Query: 291 KLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 + + ++ +D V + ADE+ N+L++ AD + + +LD+ QV++ Sbjct: 450 AMTSVSMGSSGTGTNELVD-VRVVADEENNALMVYADGKQYGIVKEALKQLDVVATQVII 508 Query: 351 EAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWD 410 EA I+EVQ + L G++W KN + G AA A + ++++ Sbjct: 509 EASIMEVQLIDELRYGLEWTFKNGLGSNYDGLGTLAAGAAGPAAVAGFSYTVSNSV---- 564 Query: 411 MFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS 470 GD +L AL+ + ++++TPS++ LDN +A +VG VPVL G Sbjct: 565 --------------GDISAVLNALSEESLINVISTPSVMVLDNHVAFISVGDQVPVLQGQ 610 Query: 471 QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRT 530 T+G N + + G +L V P VN G V ++IEQ V V + ++T F RT Sbjct: 611 TITNGGNSVQNITYRDTGVQLSVRPSVNAGGLVTMDIEQSVIDVGAIDSATGQRAFLDRT 670 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 I + V V++ E+VVLGGL+ + S S VP+L +IPL G LF T+T+ + L+V I Sbjct: 671 INSRVAVRSSESVVLGGLIRENSSLGDSGVPILREIPLFGSLFGTTTTDSRRTELLVIIT 730 Query: 591 PTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKS 623 P + ++D R++S E + R + R +S Sbjct: 731 PRALYNEDELRAVSDEMREQVRFMELVRDPPRS 763 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 123/297 (41%), Gaps = 11/297 (3%) Query: 25 NEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + NF A + + V IVG L ++D +QG +++R+ + E S+L Sbjct: 111 GDDVSLNFEQAPLDEVVHAIVGDILQLDYVVDRPIQGKVTLRTRTPIPRAELLVVLESLL 170 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 + +I D+G + S + G T ++PL+ + A +A + Sbjct: 171 KAHDALMIRGDDGRYLITGSQQAMRLRPDVTSVDDIAAGYS--TMVIPLQYISASAMASI 228 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQIIHLEYAS 201 L + + + + + +L++ G ++ +E++ DV + LE +S Sbjct: 229 LEPLAEKDAFVRIDNIRA--LLMMAGTREQLSGWLEIVSTFDVDLLAGMSVGMFPLENSS 286 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK-ARQRITSLLKSLDV 260 E+ L L+ + G+ + +++ +R NS+++ P R+ S ++ +DV Sbjct: 287 VEETLAALEALMEAAGGEEGDITGI-VRVLPMERLNSILVVTPRAHYLDRVGSWIERIDV 345 Query: 261 EESE--EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITA 315 + E VY ++ AT L ++L + G AR+ ++S + + A Sbjct: 346 DPDARFEKRLYVYPVQNTTATRLAQLLNSIYAGGAANSGGARQQNASRTPGDQSAVA 402 >UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW26_DICNV Length = 734 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 107/439 (24%), Positives = 189/439 (43%), Gaps = 35/439 (7%) Query: 186 VIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPE 245 V G ++ ++ + A D+ L +G + +T +I PE Sbjct: 317 VSGNITLRLDNVPWDQALDIIMKTKGLAKRENG--------------NDKTGRIIYIAPE 362 Query: 246 KAR--QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA-RKP 302 K I +L ++ T +KYAKA++L +L E D N Sbjct: 363 KELDTAEIDALEGWQKKQQLMPMQTDFIRIKYAKASDLQRILEKSREISSDGTKNGILAA 422 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 + ++T DE+ N+L+++ + + + ++ARLD QVLV+A +V +D Sbjct: 423 QDAVLSARGSVTIDERMNALIVSDIPAKIQAVRDLVARLDESVRQVLVDARLVITKDNFA 482 Query: 363 LNLGVQWA---------NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 +LG ++ N VG+ T T + G+ + ++ + Sbjct: 483 RDLGARFGLSFKGTAGSNPIVGSGNLTGTTFYAGMLEEKTIPIDNRLGVNLGIASPNVRA 542 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 G++ + + L AL + +++++++P +VT D A GQ++P +T Sbjct: 543 PSYGISILGSDVLVDLELQALQNEGRSEVISSPRVVTQDGNQAKVMSGQEIPY-----ST 597 Query: 474 SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQN 533 D + K L+VTP+V D V +EIE + V+ S P + + Sbjct: 598 LDDKGSVQTDYKEALLSLEVTPRVTPNDRVNMEIEIKKDRVNWSEQVLGQPAIDKNLLNT 657 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 V V GET+VLGG+ + +KVPLLGDIP+VG +F+ T+ + K L++FI P + Sbjct: 658 KVEVANGETIVLGGIYEQEQSLSENKVPLLGDIPVVGNVFKNTNKKFTKNELLIFITPRV 717 Query: 594 IRDDDVYRSLSKEKYTRYR 612 I R +K++ R Sbjct: 718 I----DQRLTDSDKFSNLR 732 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 70/183 (38%), Gaps = 26/183 (14%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E NF + ++R + I+ + + I++ +V G I++R ++ + I+ Sbjct: 284 GEPLSLNFQDIEVRAVLNIIAEFTQQNIVVSDTVSGNITLRLDN-VPWDQALDI---IMK 339 Query: 85 LYGYSVITLDNG----FLKVVRSANVKTSPGMIADS-SRPGVGDELVTRIVPLENVPARD 139 G + N + + + T+ + + + T + ++ A D Sbjct: 340 TKGLAKRENGNDKTGRIIYIAPEKELDTAEIDALEGWQKKQQLMPMQTDFIRIKYAKASD 399 Query: 140 LAPLL---RQMMDAG--------------SVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 L +L R++ G + G+V E N LI++ + I + +++ Sbjct: 400 LQRILEKSREISSDGTKNGILAAQDAVLSARGSVTIDERMNALIVSDIPAKIQAVRDLVA 459 Query: 183 RVD 185 R+D Sbjct: 460 RLD 462 >UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=cellular organisms RepID=Q3A2N4_PELCD Length = 874 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 110/433 (25%), Positives = 177/433 (40%), Gaps = 48/433 (11%) Query: 162 SNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQ 221 N+L L G S +N +I DV G ++I + + A DL + +L GK Q Sbjct: 489 RNILQLIGEVSDLN----IIVGDDVKGNMTLRLIDVPWDQALDLVLEIREL-----GKLQ 539 Query: 222 MPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNL 281 +L +A R + + + E+ E+ T + + Y L Sbjct: 540 EGNVLRILPLAKIR------------QMQQEQFAAARAKEKLEDLVTDLIPVSYTDVEGL 587 Query: 282 VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 VE D + D + L++T SV + ++ L Sbjct: 588 VEACKKRLS------------------DRGKVIGDVRDKKLIVTDIPSVVADIKQLVRLL 629 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 D QVL+EA IVE +LGV W + Q + + +A+ G+ Sbjct: 630 DTPVRQVLIEARIVEASATFSRDLGVNWG---ISYQHNPGSDVEGNDASIGMGGTLVGIP 686 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 ++ + + S G + L AL + I++TP + TL+ + A G Sbjct: 687 VSPGEVSSGIVSGLTFGQVGVDKTVLDLRLAALEQSGHGRIVSTPRVSTLNGEEAEVAQG 746 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST 521 ++P LS S E K LKVTP++N +V+LEIE + S +++ + Sbjct: 747 TEIPYLSVSDDG------TKTEFKKAELSLKVTPEINPDGSVILEIEAKNDSRGANTGLS 800 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 P +T+ VLVK GET V+GG+ E S VP L ++P++G LF+ S Sbjct: 801 EAPAIDTKRATTKVLVKDGETTVIGGIFIQDKSESDSGVPWLMNVPILGHLFKSKSVSEE 860 Query: 582 KRNLMVFIRPTII 594 +R L+VFI P I+ Sbjct: 861 RRELLVFITPRIL 873 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 76/180 (42%), Gaps = 8/180 (4%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ F++ADIR ++++G+ I++ V+G +++R D + L I + Sbjct: 476 GQKISLVFDDADIRNILQLIGEVSDLNIIVGDDVKGNMTLRLID-VPWDQALDLVLEIRE 534 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG-DELVTRIVPLENVPARDLAPL 143 L + L+++ A ++ ++R ++LVT ++P+ L Sbjct: 535 LGKL----QEGNVLRILPLAKIRQMQQEQFAAARAKEKLEDLVTDLIPVSYTDVEGLVEA 590 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 ++ + G V+ LI+T S + + ++++ +D + + ASA Sbjct: 591 CKKRLSD--RGKVIGDVRDKKLIVTDIPSVVADIKQLVRLLDTPVRQVLIEARIVEASAT 648 >UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Tax=Legionella RepID=Q5X6H2_LEGPA Length = 698 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 86/418 (20%), Positives = 183/418 (43%), Gaps = 28/418 (6%) Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT--SLLKSLDV 260 + + + +++ + +L+ + + +R ++++ + + ++ L + Sbjct: 301 DKVQGDITLRLNDIPWDQALDIILTTQGLDKRRKGNVMLIDTKASMDKMEEEQLKSQQTI 360 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTN 320 E+ E + + + YAKA ++ ++ L ++G I+ D +TN Sbjct: 361 EKLEPIRSDLIQINYAKAADIAVLIKDKQNSLLSDRG--------------KISVDARTN 406 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 ++ I + E++ +I +LDI QVL+EA IVEV ++G++W T Sbjct: 407 TIWIQDTGTKIEEVRELIKQLDIPVKQVLIEARIVEVTKDFSQDIGIRWGVSRPTHLSGT 466 Query: 381 NTGLPIFNAAQGVADY----KKNGGITSANPAWDMFSAYNGMAAGFFNGD--WGVLLTAL 434 G A+ ++ +A P A G+A N + + L+AL Sbjct: 467 LEGANELARGTAPANVVPLERRLNLDLAAAPLTGATPASVGIALAKLNDNILLDLELSAL 526 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVT 494 S + +++++P ++T + + A G+++P + + + V K LKVT Sbjct: 527 ESEGRAELISSPRLITTNQQAAVIESGEEIPYQEATSSGA-----TAVAFKKAVLSLKVT 581 Query: 495 PQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSK 554 PQ+ +L++++ + + + P T+ IQ VLV G+T+VLGG+ Sbjct: 582 PQITPDGKILMDLQINQDTPSPQTFLGV-PAIITKEIQTNVLVNNGQTIVLGGIYKQDKN 640 Query: 555 EQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 + ++++P G++P+VG LF L++FI P II + ++ + Y+ Sbjct: 641 KVINRIPFFGELPVVGILFSNRQITLKNEELLIFITPRIITNALSITTIEGREKDVYK 698 Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 92/232 (39%), Gaps = 15/232 (6%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ NF N IR ++++ G +++ VQG I++R ND + IL Sbjct: 270 GKRISLNFQNISIRAVLQLLADFTGINMVVSDKVQGDITLRLND-IPWDQALDI---ILT 325 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G N L +++ K + + + + ++ + A D+A L+ Sbjct: 326 TQGLDKRRKGNVMLIDTKASMDKMEEEQLKSQQTIEKLEPIRSDLIQINYAKAADIAVLI 385 Query: 145 RQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQQIIHLEY 199 + ++ G + +N + + + I ++ E+IK++D+ + + +I+ + Sbjct: 386 KDKQNSLLSDRGKISVDARTNTIWIQDTGTKIEEVRELIKQLDIPVKQVLIEARIVEVTK 445 Query: 200 ASAEDL-----AEILNQLISESHGKSQMP-ALLSAKIVADKRTNSLIISGPE 245 ++D+ L G +++ A +V +R +L ++ Sbjct: 446 DFSQDIGIRWGVSRPTHLSGTLEGANELARGTAPANVVPLERRLNLDLAAAP 497 >UniRef50_Q39X07 Type II and III secretion system protein:NolW-like:Secretin/TonB, short-like n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39X07_GEOMG Length = 870 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 110/562 (19%), Positives = 204/562 (36%), Gaps = 74/562 (13%) Query: 36 DIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDN 95 D F +V + + V+G V+ +Q Y+ + Sbjct: 379 DTSAFASVVQKVTPYQV----KVKGRHDVKVQVALRRQTSYEL-------------RREG 421 Query: 96 GFLKVVRSANVKTSPGMIA-DSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVG 154 G + + V + +A + ++ + +V + V A + Sbjct: 422 GVIYLDLKNPVDITAAPVASEPAKQTESERSAPVVVKSQAVSPTAAADGKKVYTGRRVTL 481 Query: 155 NVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLIS 214 + + L S +N ++ DV GT +++++ + A D+ Sbjct: 482 EFSDADIRKIFQLIAEVSNLNFIVG----DDVTGTISLKLVNVPWDQALDVI-------- 529 Query: 215 ESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRI--TSLLKSLDVEESEEGNTRVYY 272 L K + +R +++ P+ + E+ E T V+ Sbjct: 530 -----------LENKGLGMQRDGNIVQIRPKSKIMTLADEEQKAKKSREQGMELKTEVFD 578 Query: 273 LKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQE 332 + YA ++V + + I+ D +TN +++ V Sbjct: 579 VNYAAVGDVVTQFNTLKS------------------ERGMISQDARTNRVIVKDIAPVVA 620 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG 392 ++ ++ LDI QV++EA IVE LG+QW A T + Sbjct: 621 EMRNLLKSLDIPEKQVMIEARIVEASSTVTQELGIQWGIHARDANTIGVTNADVGFGGIL 680 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLD 452 G A F G + L+ALAS + I+++P +VTL+ Sbjct: 681 TGLAPTAGTFGPGAAAGITFGKL------ISGGSLDLKLSALASGERIKIISSPKVVTLN 734 Query: 453 NKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 NK A + GQ +P + S E L+VTP + ++ ++I+ + Sbjct: 735 NKAAKISQGQSIPYSTVSAEG------TKTEFVEAALTLEVTPHIASDGSISMKIKATNN 788 Query: 513 SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 S + + P N + +LV+ GET V+GG+ D + VP DIPL+G L Sbjct: 789 SAAPAPTGAV-PAINKKEATTELLVRNGETTVIGGIYVDNDSQADQGVPFFKDIPLLGWL 847 Query: 573 FRYTSTERAKRNLMVFIRPTII 594 F+ ++T++ K L++FI P I+ Sbjct: 848 FKSSNTQKIKNELLIFITPKIV 869 Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 65/169 (38%), Gaps = 8/169 (4%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 + F++ADIR+ +++ + ++ V GTIS++ + + IL+ Sbjct: 476 GRRVTLEFSDADIRKIFQLIAEVSNLNFIVGDDVTGTISLKLVN-VPWDQALDV---ILE 531 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP-GVGDELVTRIVPLENVPARDLAPL 143 G + D +++ + + T + + G EL T + + D+ Sbjct: 532 NKGLGM-QRDGNIVQIRPKSKIMTLADEEQKAKKSREQGMELKTEVFDVNYAAVGDVVTQ 590 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 + G + +N +I+ A + ++ ++K +D+ + Sbjct: 591 FNTL--KSERGMISQDARTNRVIVKDIAPVVAEMRNLLKSLDIPEKQVM 637 >UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=Acinetobacter RepID=Q6F7E3_ACIAD Length = 723 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 103/441 (23%), Positives = 188/441 (42%), Gaps = 30/441 (6%) Query: 183 RVDVIGTEKQQIIHL-------EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKR 235 +D E ++++ L +A+ + + + + + +L K + +R Sbjct: 280 SLDFQDIEVRRVLQLLADFTNINMVTADSVQGNITLHLKDVPWDQALDIILKTKNLDKRR 339 Query: 236 TNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK 293 ++I P E + + T LKYAKA ++ +++T Sbjct: 340 NGNVIWIAPVSELIKSEEDEAKAIAQSTKLAPLQTEYILLKYAKAADIEKLITQGRNSGT 399 Query: 294 DEKGNARKPSSSGAMDNV--------AITADEQTNSLVITADQSVQEKLATVIARLDIRR 345 + D+V I+ D +TN+L+I +++ +I LDI Sbjct: 400 SNSNTNGSATVEPLGDSVGTLLSPRGTISLDPRTNTLIINDTSQKIDQIRKMIDLLDIPV 459 Query: 346 AQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQ-GVADYKKNGGITS 404 QV++EA IV +GV+W + G Q +N + + + NG T Sbjct: 460 KQVMIEARIVRATTSFSKEMGVKWGILSQGINQNSNLLVGGSETTLWNLRNPDSNGTYTI 519 Query: 405 ANPA------WDMFSAYNGMAAGFFNGD---WGVLLTALASNNKNDILATPSIVTLDNKL 455 P + + +A G + + L+AL ++ ++++TP +++ D + Sbjct: 520 ERPDNLNVDLGVTTTGASSIAFGLISLSDFMLDLELSALQADGYGEVISTPKVMSADKQK 579 Query: 456 ASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD 515 A G +VP S + + +G + K L+VTP + +L+E+ S++ Sbjct: 580 AKVATGVEVPYQSTTNSAAGSTATTS--FKEALLSLEVTPNITPDGKILMELNIANDSIN 637 Query: 516 SSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRY 575 S + + N TI VLV GETVVLGG+ + + V+KVP LGD+P VG+LF+ Sbjct: 638 SYAQNGEA-ILNKNTINTNVLVNNGETVVLGGVFEQTTNNAVTKVPFLGDLPYVGRLFKK 696 Query: 576 TSTERAKRNLMVFIRPTIIRD 596 T+ AK L++F+ P I+ D Sbjct: 697 TAKSEAKNELLIFVTPRIVND 717 Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 64/192 (33%), Gaps = 28/192 (14%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ +F + ++R+ ++++ ++ SVQG I++ + IL Sbjct: 276 GKKISLDFQDIEVRRVLQLLADFTNINMVTADSVQGNITLHL-KDVPWDQALDI---ILK 331 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 N S +K+ ++ L T + L+ A D+ L+ Sbjct: 332 TKNLDKRRNGNVIWIAPVSELIKSEEDEAKAIAQSTKLAPLQTEYILLKYAKAADIEKLI 391 Query: 145 -------------------RQMMDA-----GSVGNVVHYEPSNVLILTGRASTINKLIEV 180 + D+ G + +N LI+ + I+++ ++ Sbjct: 392 TQGRNSGTSNSNTNGSATVEPLGDSVGTLLSPRGTISLDPRTNTLIINDTSQKIDQIRKM 451 Query: 181 IKRVDVIGTEKQ 192 I +D+ + Sbjct: 452 IDLLDIPVKQVM 463 >UniRef50_B6WRK6 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WRK6_9DELT Length = 651 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 136/676 (20%), Positives = 254/676 (37%), Gaps = 102/676 (15%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANF----NNADIRQFVEIVGQHLGKTILIDPSVQ 59 L I CCLL + CA + A F +N +I + + G + P+++ Sbjct: 9 LCWIFCCLLVTEGL-CASSRSAFPFRAAFSHYADNENICTVLSAFARAEGYGSVCSPALK 67 Query: 60 GTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 G +S R + + S + Y+ G + + KT + + Sbjct: 68 GQMSGRFEQ-VDPRTFLNGMRSAFGVRWYT-----QGHTVTFWNDSEKTEAFLAPST--- 118 Query: 120 GVGDELVTRIVPLENVPARDLAPLLRQ--MMDAGSVGNVVHYEPSNVLILTGRASTINKL 177 V A L +LR M+ N++H + N+L ++G +++L Sbjct: 119 ---------------VSAAALRDMLRSAGMISPQLPVNLLHAQ--NLLSVSGPPIYLDQL 161 Query: 178 IEVIKRV-DVIGTEK-QQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKR 235 +K D G+ ++ L+YA AED+ +N + S +P + S + Sbjct: 162 RGAMKAFEDAQGSRSVMRVFPLKYAWAEDM--KVNSMDS----TVTIPGVAS---ILQAM 212 Query: 236 TNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKA-TNLVEVLTGVSEKLKD 294 N ++G + Q S +G R L A T+ + S+ KD Sbjct: 213 ANGTPLTGSQVTVQ------------PSAQGGLRGKGLIAMNASTDTSQAAPAASQGGKD 260 Query: 295 EKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 + G PS I AD + N++V+T + A VIA LD V + A I Sbjct: 261 QSGTPSGPS---------IIADPRVNAVVVTDAEYRMSYYAKVIADLDKPVELVEIHAAI 311 Query: 355 VEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 V++ + GV W+ + +T G + G+ + G ++ ++ + Sbjct: 312 VDIDSDFSRDFGVNWSGTGAYGKHWTGGGSAGGTSTSGI--FPSAGASSAGGLSYSTLYS 369 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 + + + +TAL + + +L PS++T+DN AS V Sbjct: 370 HG-------SDYFLARVTALEEDGQARVLGKPSVLTMDNVQASLENTSSYYVPV------ 416 Query: 475 GDNVFNTVERKTVGTKLKVTPQVNEG-----DAVLLEIEQEVSSVDSSSNSTLGP----T 525 N + + + GT LKVTP + G D++ L + + D S+ ++ P Sbjct: 417 SGNESSDLFKIDSGTVLKVTPHIIPGLPGQADSIKLMVSVQDDRDDGSNLFSVDPNNLSP 476 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 I +V G+++++GG + + + +P L +IP++G LF T + + Sbjct: 477 IKQTKINTQAIVGEGQSLLIGGHYYEIQSDAETGIPGLKNIPILGGLFGATGKKHQRMER 536 Query: 586 MVFIRPTIIR------------DDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLP 633 ++ I P I+R D R+ ++ Y R ++ + + + P Sbjct: 537 LILITPRIVRMDTASNVPTRVDDPRFSRTPTQADYEERRPKEMPVGGCARRRELAPDVQP 596 Query: 634 VLDENTFNSHAPAPSS 649 AP P++ Sbjct: 597 APPVTVTPQPAPVPAT 612 >UniRef50_B0UFJ1 General secretion pathway protein D n=4 Tax=Methylobacterium RepID=B0UFJ1_METS4 Length = 797 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 166/342 (48%), Gaps = 14/342 (4%) Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 + + G+ S + I ADE NSLVI+A ++ EK+ ++ RLD R QVL Sbjct: 449 SGMGEAGGSGAVYGSGARRGGIGIVADETNNSLVISATRTQYEKILRILGRLDARPTQVL 508 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW 409 +E +I EV + L GVQW KN G++ FN AQ G + A Sbjct: 509 LETVIAEVTLNDKLEFGVQWFLKNGGSR---------FNLAQSDTAASVASGTSGAGALV 559 Query: 410 DMF-SAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS 468 G + D+ V+L AL + ++L++P+I LDN+ A +G VP++ Sbjct: 560 SAAMRGVPGFNYLLNDADFHVVLNALRGVTRVNVLSSPNITVLDNRTARLQIGDQVPIVK 619 Query: 469 GSQTTS---GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-P 524 S ++ + N +E K G L VTP+VN+ V+L+I QEVS V ++ S + P Sbjct: 620 QSGQSALAGNAPILNQIELKDTGVILSVTPRVNKNGLVVLDINQEVSDVVPTTTSNINSP 679 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 T R + +V V G ++ +GG++ + ++ +P+LGD+P++G FR S R + Sbjct: 680 TIRQRRVATSVAVSDGHSLAIGGMVQEKAQIGTEALPVLGDLPVIGPAFRNKSDLRVRTE 739 Query: 585 LMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 L+VF+RP +IR ++ + + R R L Sbjct: 740 LIVFLRPKVIRGTADADRIASDFRDQVRTMMPVRPVSAPPPL 781 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 91/248 (36%), Gaps = 14/248 (5%) Query: 48 LGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVK 107 LG + +D V GT+++++ S+ F S L G ++ + V+ Sbjct: 94 LGWSYSLDERVAGTVTLQTAGPVSRAALLGLFESALAARGVTLRRRGSH----VQILPAG 149 Query: 108 TSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLIL 167 P P E +++PL + A ++ +L + V + N+LI+ Sbjct: 150 APPPPSGVRGTPDAAGEPGAQVIPLRWISAGEMQSILAAVAPRDLV--LRADRTRNLLIV 207 Query: 168 TGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAEDLAEILNQLISESHGKSQMPAL 225 +G + I L E I DV + + + A+ +A L ++ G A Sbjct: 208 SGDRAQIQALRETIAVFDVDWMRGLSVAMVPVRRANPSAIARDLAEVF----GGEASGAG 263 Query: 226 LSAKIVADKRTNSLIISGPEK-ARQRITSLLKSLD-VEESEEGNTRVYYLKYAKATNLVE 283 + + ++ ++++ R + L+ V E VY ++ A L Sbjct: 264 AMIRFLPNEALGAILVVSSRALYLDRAREWIARLEVVAADRERQLFVYRIQNRSAKELAA 323 Query: 284 VLTGVSEK 291 VL GV Sbjct: 324 VLQGVVSS 331 >UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae RepID=COME_HAEIN Length = 445 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 92/341 (26%), Positives = 160/341 (46%), Gaps = 24/341 (7%) Query: 268 TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITAD 327 + L +AKA+ L++ LT S L G +IT D+++N LVI + Sbjct: 122 SHTVKLHFAKASELMKSLTTGSGSLLSPAG--------------SITFDDRSNLLVIQDE 167 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIF 387 + + +IA +D Q+ +EA IV + D + LGV+W N G Sbjct: 168 PRSVQNIKKLIAEMDKPIEQIAIEARIVTITDESLKELGVRWGIFNPTENARRVAGSLTG 227 Query: 388 NAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPS 447 N+ + +AD T+ PA + + + L+AL N +I+A+P Sbjct: 228 NSFENIADNLNVNFATTTTPAGSIALQVAKINGRL----LDLELSALERENNVEIIASPR 283 Query: 448 IVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 ++T + K AS G ++P + ++ N +VE + L+VTP +++ + +LL++ Sbjct: 284 LLTTNKKSASIKQGTEIPYIV----SNTRNDTQSVEFREAVLGLEVTPHISKDNNILLDL 339 Query: 508 EQEVSSVDS--SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGD 565 +S S + + + + I V K GET+VLGG+ D + KVPLLGD Sbjct: 340 LVSQNSPGSRVAYGQNEVVSIDKQEINTQVFAKDGETIVLGGVFHDTITKSEDKVPLLGD 399 Query: 566 IPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKE 606 IP++ +LF S KR L++F+ P I++ + +L ++ Sbjct: 400 IPVIKRLFSKESERHQKRELVIFVTPHILKAGETLEALKQK 440 Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 82/207 (39%), Gaps = 20/207 (9%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 C L++ +NE++ + A + Q +E + ++I ++ IS++ Sbjct: 11 FLVCFCLPLIVFANPKTDNERFFIRLSQAPLAQTLEQLAFQQDVNLVIGDILENKISLKL 70 Query: 67 ND-TFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL 125 N+ + L I+ + + D+G + S + K ++ P L Sbjct: 71 NNIDMPR------LLQIIAKSKHLTLNKDDGIYYLNGSQSGKGQVAGNLTTNEPH----L 120 Query: 126 VTRIVPLENVPARDLAPLLR----QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 V+ V L A +L L ++ G++ + SN+L++ ++ + ++I Sbjct: 121 VSHTVKLHFAKASELMKSLTTGSGSLLSPA--GSITFDDRSNLLVIQDEPRSVQNIKKLI 178 Query: 182 KRVDVIGTE---KQQIIHLEYASAEDL 205 +D + + +I+ + S ++L Sbjct: 179 AEMDKPIEQIAIEARIVTITDESLKEL 205 >UniRef50_A1WFQ3 General secretion pathway protein D n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WFQ3_VEREI Length = 720 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 119/473 (25%), Positives = 203/473 (42%), Gaps = 32/473 (6%) Query: 148 MDAGSVGNVVHYEPSN-VLILTGRASTINKLIEVIKRVDVIGTEKQQ----IIHLEYASA 202 + V+ E N +L++T RA+ +++ I+R+D + I ++ +A Sbjct: 255 LPLAGAVRVLPIERINSILVVTPRAAYLDEARRWIERLDQPSDNSAEPQLFIYQVQNVNA 314 Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE 262 LA +L+ + A + P ++ S V E Sbjct: 315 RHLASVLSGIFGTKPAPGTAANSGVAPGL------------PAATTSSNSNSSNSSPVIE 362 Query: 263 SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS--GAMDNVAITADEQTN 320 T ++ G + G PS+ A+ N+ + ADE N Sbjct: 363 GLWLGTGAIGSSQSRFGGFRSGRFGSGQATTGASGARDTPSAPAVAALGNIRVMADELNN 422 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 S+++ + ++ K+ + + RLD+ QVL+EA I+EV + L G+QWA Sbjct: 423 SVLVWSTRAEYAKIESTLRRLDLPPTQVLIEASIIEVTLNDDLRYGLQWAF--------- 473 Query: 381 NTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKN 440 N + QG + TS A A G +L L++ Sbjct: 474 NDSRSGIDRGQGALSSRDG---TSTGGILGGALAGFSYALKSPAGAVRAMLNVLSAKTTV 530 Query: 441 DILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT-VERKTVGTKLKVTPQVNE 499 ++A+PS++ LDN AS VG P+ +G+ + V +T +E K G L VTP VN Sbjct: 531 KVVASPSLMVLDNHTASIAVGDQTPIQAGTTSNLEGTVTSTNIEYKDTGVNLVVTPSVNA 590 Query: 500 GDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSK 559 G+ V ++I+Q V+ V + T F R + + V V++GE++V+GGL+ + S S Sbjct: 591 GNIVTMQIDQSVTDVGAKDEVTNQRAFLQRQLSSKVSVRSGESIVMGGLIQESSSSTKSG 650 Query: 560 VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 +P+L +PL G LF T + + L+V I P ++R D R +S+E R + Sbjct: 651 IPVLHALPLFGNLFGTTVNDGRRTELLVIITPRVVRSDIDIRQVSEELRDRMK 703 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 117/330 (35%), Gaps = 46/330 (13%) Query: 24 ENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 E F A I + V + G L ++ P + G+I++ + + + + Sbjct: 24 EGAPSSFRFEEAPIAEVVRTMLGDILKVDYVLHPPISGSITLATQQPVAPDQAIFLLETA 83 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMI----ADSSRPGVGDELVTRIVPLENVPAR 138 L G +++ G V R +K + S G V +VPL+ + A Sbjct: 84 LQANGLAMLRDPRGAYHVGRPETLKGIGAAVRQAGVGSGPLPPGSGAV--VVPLQYIGAA 141 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV--IGTEKQQIIH 196 ++A +LR M+ ++ V N+L+L G + +++I DV + + Sbjct: 142 EMATILRPMVPPEALIRVDTV--RNLLVLAGSRAQAEGWLDIISTFDVNLLKGMSVGVFP 199 Query: 197 LEYASAEDLAEILNQLISESHGKSQ-------------------------------MPAL 225 L+Y S +++ L Q +S Q +P Sbjct: 200 LKYVSVKEVEAAL-QWLSTGGAPRQNNQAADRPVSAIAMPGAAPGGTAAGPADNMPLPLA 258 Query: 226 LSAKIVADKRTNSLIISGPEKA-RQRITSLLKSLDVE--ESEEGNTRVYYLKYAKATNLV 282 + +++ +R NS+++ P A ++ LD S E +Y ++ A +L Sbjct: 259 GAVRVLPIERINSILVVTPRAAYLDEARRWIERLDQPSDNSAEPQLFIYQVQNVNARHLA 318 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 VL+G+ A + G Sbjct: 319 SVLSGIFGTKPAPGTAANSGVAPGLPAATT 348 Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 63/409 (15%), Positives = 133/409 (32%), Gaps = 62/409 (15%) Query: 96 GFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL-----RQMMDA 150 G K V S ++ V ++ I+ ++ V ++ + + + Sbjct: 15 GAAKPVPPPEGAPSSFRFEEAPIAEVVRTMLGDILKVDYVLHPPISGSITLATQQPVAPD 74 Query: 151 GSVGNVVHYEPSNVLIL---------TGRASTINKLIEVIKRVDV-----IGTEKQQIIH 196 ++ + +N L + GR T+ + +++ V ++ Sbjct: 75 QAIFLLETALQANGLAMLRDPRGAYHVGRPETLKGIGAAVRQAGVGSGPLPPGSGAVVVP 134 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 L+Y A ++A IL ++ A I D N L+++G + ++ Sbjct: 135 LQYIGAAEMATILRPMVPPE-----------ALIRVDTVRNLLVLAGSRAQAEGWLDIIS 183 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN--ARKPSSSGAM------ 308 + DV + + V+ LKY + L +S + N A +P S+ AM Sbjct: 184 TFDVNLLKGMSVGVFPLKYVSVKEVEAALQWLSTGGAPRQNNQAADRPVSAIAMPGAAPG 243 Query: 309 ---------------DNVAITADEQTNSLVITADQSVQ-EKLATVIARLDIR-----RAQ 347 V + E+ NS+++ ++ ++ I RLD Q Sbjct: 244 GTAAGPADNMPLPLAGAVRVLPIERINSILVVTPRAAYLDEARRWIERLDQPSDNSAEPQ 303 Query: 348 VLV-EAIIVEVQDGNGLNLGVQWANKNVGAQQFTNT--GLPIFNAAQGVADYKKNGGITS 404 + + + V + + G+ G + GLP + + I Sbjct: 304 LFIYQVQNVNARHLASVLSGIFGTKPAPGTAANSGVAPGLPAATTSSNSNSSNSSPVIEG 363 Query: 405 ANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDN 453 + GF +G +G ++ D + P++ L N Sbjct: 364 LWLGTGAIGSSQSRFGGFRSGRFGSGQATTGASGARDTPSAPAVAALGN 412 >UniRef50_Q1YS04 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=Gammaproteobacteria RepID=Q1YS04_9GAMM Length = 754 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 91/441 (20%), Positives = 175/441 (39%), Gaps = 46/441 (10%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ + + + + + +L AK + ++ ++++ P E A Q + Sbjct: 316 LNLVASDTVTGNITLWLDDVPWDQALEIILKAKGLDKRQEGNVLMVAPAAEIAEQERLQV 375 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV--SEKLKDEKGNARKPSSSGAMDNVA 312 + ++E T +KYA A + E+ T E G +++ + + Sbjct: 376 EANKQLQELAPLETTFVRIKYADAAEIFELFTASRGDEGQSSSGGREGNATTTILSERGS 435 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 DE+TN++++T + +I +D+ QVL+EA IV LGV W Sbjct: 436 AIVDERTNTIILTDTEDKINAFKRLIDEIDVPIKQVLIEARIVIANTDFKKELGVTWGLA 495 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKN--------------------------------- 399 + G P + G + + Sbjct: 496 GIEKLTGGTIGSPFGDKTLGFSGRRSGLTPGAGVKETFTYSADEIETDDDGITTYTRNYD 555 Query: 400 ---GGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLA 456 G + + D + + N + L+AL S+ +I++ P ++T D + A Sbjct: 556 IGLGDSLAVDLGVDNPTGSFSLGYLTDNFLIDLELSALESDGFGEIVSQPKVLTGDKQQA 615 Query: 457 SFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS 516 G ++ + + + ++E K +L+VTPQ+ + +++++ SV Sbjct: 616 VIKSGTEIAYQKATSSGA-----TSIEFKEAVLQLEVTPQITPDNRIIMDLLVSQDSV-G 669 Query: 517 SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYT 576 + T P+ + I+ LV G+T+VL G+ KVPLLGD+P +G+LFR Sbjct: 670 AFTPTGEPSIDITQIETQALVGNGQTLVLEGIFQTEEVNGTDKVPLLGDLPFLGKLFRND 729 Query: 577 STERAKRNLMVFIRPTIIRDD 597 KR ++ FI P II D+ Sbjct: 730 LRNIEKREILSFITPKIIDDN 750 Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 24/183 (13%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+ +F + ++R ++I+ + ++ +V G I++ +D + + IL Sbjct: 290 NGERLTLDFQDIEVRSVLQIIAEFTSLNLVASDTVTGNITLWLDD-VPWDQALEI---IL 345 Query: 84 DLYGYSVITLDNGFLKVVRSAN-VKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 G + L V +A + + + + L T V ++ A ++ Sbjct: 346 KAKGLD-KRQEGNVLMVAPAAEIAEQERLQVEANKQLQELAPLETTFVRIKYADAAEIFE 404 Query: 143 LL-------RQMMDAGSVGN-----------VVHYEPSNVLILTGRASTINKLIEVIKRV 184 L Q G GN + E +N +ILT IN +I + Sbjct: 405 LFTASRGDEGQSSSGGREGNATTTILSERGSAIVDERTNTIILTDTEDKINAFKRLIDEI 464 Query: 185 DVI 187 DV Sbjct: 465 DVP 467 >UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2K0_9PROT Length = 688 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 117/585 (20%), Positives = 226/585 (38%), Gaps = 89/585 (15%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTIL---IDPSVQGTISVR-SNDTFSQQEYYQFFL 80 + + ++ DI ++ G+ L L + ++Q + V + Y Sbjct: 177 EGRVQIDLSDTDIGIDIKQQGRLLLVDFLHTSLPRNLQRKLDVTDFGTPVQLVDAYAQGE 236 Query: 81 SI---LDLYG---YSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 ++ ++ G YS DN F ++ V P + ++PG E +T + +N Sbjct: 237 NVHLSIEPKGDWEYSAYQADNKF--IIDVKTVVEDPNKLVKGNQPGYAGEKLT--LNFQN 292 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 + R+ ++ ++++ S ++ DV + I Sbjct: 293 ISTREALSVIADFTGLN-------------MVISDTVSG----NLTLRLKDVPWDQALDI 335 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRIT 252 I L +K + ++ ++I P E A + Sbjct: 336 I------------------------------LQSKGLDMRKNGNVIQVAPREEIASKEKL 365 Query: 253 SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 ++ + E T + L YAKA ++ +L L ++G++ Sbjct: 366 DFASRQEIGDLEPLRTESFQLSYAKALDIANLLKNKDTGLLSKRGSS------------- 412 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 +D +TN+L + + E++ T + +LD+ QV++EA VE + LG + + Sbjct: 413 -VSDLRTNTLFVQDTPTRLEEVRTFVKQLDVPVRQVMIEARFVEAGETFNQTLGGRLSYT 471 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 G+ ++ G S + +N A + L Sbjct: 472 GPGSTVAGGGFAGPAGNRAALSTTSLLPGAGSVT-GGMTLNLFNAAATKV----LTLELN 526 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLK 492 A + +A+P +VT D A+ G +VP L + + + +V K L Sbjct: 527 ASELDGTTKNIASPRVVTGDKTPATIESGVEVPYLQATSSGA-----TSVAFKKAVLGLT 581 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDF 552 VTPQ+ D V +++ VS + + P+ NT+ + VLV G TVV+GG+ Sbjct: 582 VTPQITPDDHVGMKL--SVSQDTVGNIYSGVPSINTKKVDTQVLVDNGGTVVIGGVYTQD 639 Query: 553 SKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 + + ++PLLGDIP++G LF+ + +AK+ L+VFI P I+++ Sbjct: 640 ATDSKEQIPLLGDIPILGWLFKTDTIVKAKKELLVFITPKIVKES 684 >UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS Length = 700 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 109/478 (22%), Positives = 197/478 (41%), Gaps = 44/478 (9%) Query: 126 VTRIVPLENV--PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 V +++P NV A + + + + E VL + + S +N ++ Sbjct: 249 VIQVLPTRNVAESAANGKRAQQNFTGKRISLDFQNIEVRTVLQILAQESGMN----IVAS 304 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 V G + + + A DL + A+ + ++ ++I Sbjct: 305 DSVQGKMTLSLKDVPWDQALDLV-------------------MDARNLDMRKHGNIINIA 345 Query: 244 PEKAR--QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 P + + ++E+ ++ + LKY +L +++ N Sbjct: 346 PRQELLDKDRNEAKARREMEDLGALYSKTFQLKYKNVEEFKNILRLSDSPNTNDRSNILS 405 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 S D TN+L++T +QSV +K +I LD+ QV+VEA IVE DG Sbjct: 406 TRGSA-------LIDPATNTLIVTDNQSVIQKFERLIDELDVPAKQVMVEARIVEAADGV 458 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 +LGV++ + GA + + + G + NP ++ A + Sbjct: 459 SRSLGVKFGARRNGATSWGGDWNNSIALNNRSTNSGTSTGGVAFNPNVNLPVASATSSIS 518 Query: 422 FFN----GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN 477 + G G+ L+A+ + N ++TP ++T D K A G +P + S Sbjct: 519 VIHSWAAGALGLELSAMETENLTKTISTPRVLTQDRKEAEIRQGTQIPYTTRSSDGDSST 578 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVL 536 K LKVTP++ ++L+I D ++ + G P TR ++ + Sbjct: 579 A-----FKDAVLSLKVTPRITPDSKIILDIAINKDEPDYNNVNAEGEPGIVTRAVKTQAM 633 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 ++ G T+V+GG+ + VSKVPLLGDIP++G LF+ S R++ L+ FI P I+ Sbjct: 634 IEDGATLVVGGIYQEQMANNVSKVPLLGDIPVLGNLFKSRSRSRSRNELLFFITPRIM 691 Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 61/183 (33%), Gaps = 13/183 (7%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 + ++ +F N ++R ++I+ Q G I+ SVQG +++ S + Sbjct: 268 AQQNFTGKRISLDFQNIEVRTVLQILAQESGMNIVASDSVQGKMTL-SLKDVPWDQALDL 326 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 ++D + N R + L ++ L+ Sbjct: 327 ---VMDARNLDMRKHGNIINIAPRQELLDKDRNEAKARREMEDLGALYSKTFQLKYKNVE 383 Query: 139 DLAPLLRQMMDAG---------SVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 + +LR + G+ + +N LI+T S I K +I +DV Sbjct: 384 EFKNILRLSDSPNTNDRSNILSTRGSALIDPATNTLIVTDNQSVIQKFERLIDELDVPAK 443 Query: 190 EKQ 192 + Sbjct: 444 QVM 446 >UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gammaproteobacteria RepID=B7VLJ8_VIBSL Length = 572 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 106/405 (26%), Positives = 183/405 (45%), Gaps = 32/405 (7%) Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDV 260 + + L + + + +L K + + ++I+ P E + +L KS Sbjct: 185 DSVTGNLTLRLDGVPWQQVLDIILQVKGLDKRVDGNVILVAPKAELDLREQQALEKSRLE 244 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTN 320 EE E + + + +AKAT++ +++ G + + S + +IT DE+TN Sbjct: 245 EELGELKSEIIKINFAKATDIADMIGG-------------EGAVSMLSERGSITIDERTN 291 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 SL+I + + +I LDI QV +EA IV V +GN LGV+W + F Sbjct: 292 SLLIRELEENIAVIRGIIESLDIPVKQVQIEARIVTVTEGNLDELGVRWGVSSTNGS-FK 350 Query: 381 NTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF---------NGDWGVLL 431 G N + Y NGG ++ + ++ +A + + L Sbjct: 351 VGGSIEGNHPSQITPYDDNGGNSAIDDFLNVNLGATSPSASSIAFQVAKLGSDTLLDLEL 410 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKL 491 +AL +K +I+++P ++T + K A G ++P L S + + +V K L Sbjct: 411 SALQQESKAEIISSPRLITTNKKPAYIEQGTEIPYLESSSSGA-----TSVAFKKAVLSL 465 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG--PTFNTRTIQNAVLVKTGETVVLGGLL 549 KVTPQ+ + ++L++ + G +T+ I VLV GETVVLGG+ Sbjct: 466 KVTPQITPDNRLVLDLSVTQDRPGQVVKTGTGEAVAIDTQRIGTQVLVNNGETVVLGGIF 525 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 QV KVPLLGD+P++G LFR + K L++F+ P ++ Sbjct: 526 QHSVSSQVDKVPLLGDLPVLGALFRRSYENVGKSELLIFVTPKVV 570 >UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vibrionaceae RepID=C9QNG5_VIBOR Length = 563 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 101/396 (25%), Positives = 181/396 (45%), Gaps = 24/396 (6%) Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDV 260 + ++ L + + + +L K + + +++++ P E + L K+ Sbjct: 186 DSVSGNLTLRLDGLPWQQVLDVILQVKGLDKRVMDNVVLIAPQAELDARHREELEKARLE 245 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTN 320 E E + + +K+AKA+ + ++ G + + S A++ DE+TN Sbjct: 246 AELGELRSEIVKVKFAKASEIASMIGG-------------EGAISMLSSRGALSVDERTN 292 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 +L+I Q + + +I+ LDI QV +EA IV V +GN LGV+W N T Sbjct: 293 ALLIRDLQPNIDVIQELISALDIPVKQVQIEARIVTVHEGNLDELGVRWGYHNTNGS--T 350 Query: 381 NTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKN 440 + G I + G + A + + S +A + + L+AL +K Sbjct: 351 SLGSSIEDNVFGAVPIDDMLNVNLAATSVNASSIAFQVAKLGSDMLLDLELSALQRESKA 410 Query: 441 DILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEG 500 +++++P ++T + K A G ++P L S + + +V K LKV PQ+ Sbjct: 411 EVISSPRLITTNKKPAYIEQGTEIPYLESSSSGA-----TSVAFKKAVLSLKVVPQITPD 465 Query: 501 DAVLLEIEQEVSSVDSSSNSTLG--PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS 558 + ++L++ + G NT+ I VLV GETVVLGG+ + V Sbjct: 466 NRLVLDLSVTQDRPGDIVKTGTGEAVAINTQRIGTQVLVDNGETVVLGGIFQHSVTDAVD 525 Query: 559 KVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 KVP+LGD+PL+G LFR T + K L++F+ P ++ Sbjct: 526 KVPMLGDLPLLGALFRRTYQKMGKSELLIFVTPKVV 561 Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 81/193 (41%), Gaps = 10/193 (5%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A E ++ NF + +R ++++ + +++ SV G +++R + Q+ Sbjct: 149 PAPEQEAKKISINFQDIPVRHVLQLIADYNDFNLVVSDSVSGNLTLRLDG-LPWQQVLDV 207 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 IL + G +DN L ++ + + EL + IV ++ A Sbjct: 208 ---ILQVKGLDKRVMDNVVLIAPQAELDARHREELEKARLEAELGELRSEIVKVKFAKAS 264 Query: 139 DLAPLL---RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQ 192 ++A ++ + S G + E +N L++ I+ + E+I +D+ + + Sbjct: 265 EIASMIGGEGAISMLSSRGALSVDERTNALLIRDLQPNIDVIQELISALDIPVKQVQIEA 324 Query: 193 QIIHLEYASAEDL 205 +I+ + + ++L Sbjct: 325 RIVTVHEGNLDEL 337 >UniRef50_B8GPV1 Type IV pilus secretin PilQ n=5 Tax=Chromatiales RepID=B8GPV1_THISH Length = 711 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 99/485 (20%), Positives = 189/485 (38%), Gaps = 49/485 (10%) Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 + V + P+ A ++ N E +VL L + +N V+ Sbjct: 270 NRYVLEVKPITEAEAEEIQRDRFTYTGERLSLNFQDIEVRSVLQLIADFTDLN----VVV 325 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 V G ++ ++ + A D+ L +K + + ++I Sbjct: 326 SDSVTGNITLRLRNVPWDQALDII-------------------LRSKGLGMREAGNVIFV 366 Query: 243 GP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 P E A + + VEE + YA+A ++ ++ ++G Sbjct: 367 APTEEIAAREKLEMESRKQVEELAPLRAEFIQVNYARADDVASIIRSDRTTFLSDRG--- 423 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 ++T D +TN+L++ ++ + +I RLDI QVL+E IV D Sbjct: 424 -----------SLTVDNRTNTLLVQDTEAKLADIRRLIDRLDIPVQQVLIETRIVIASDD 472 Query: 361 NGLNLGVQWANKNVG----AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 +LG ++ VG Q FT L + + + P + Sbjct: 473 FARDLGARFGVTGVGQTGRTQTFTTGNLSGTTEMIRGDELSLLNRLNTNLPVISPSAGSI 532 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 ++ + + ++AL + +I+++P ++T + + A G+ +P + + + Sbjct: 533 ALSILRPDVLLDLEISALQVEGRGEIISSPRVITANGQTARIQQGERIPYQEATSSGA-- 590 Query: 477 NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVL 536 V+ +VTPQ+ ++L I + + P+ TR ++ V Sbjct: 591 ---TAVQFIEAVLATEVTPQITPNGNIILNIRVNKDNPGTLV-VQGTPSIETREVETQVF 646 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 V+ GETVVLGG+ + S E + KVP GD+P + LFR T K L++F+ P +I + Sbjct: 647 VRNGETVVLGGVYEIDSLETLEKVPFFGDLPGIRHLFRRTGKSTRKAELLIFVTPKVIEE 706 Query: 597 DDVYR 601 + R Sbjct: 707 TALNR 711 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 96/302 (31%), Gaps = 14/302 (4%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ NF + ++R ++++ +++ SV G I++R + IL Sbjct: 296 GERLSLNFQDIEVRSVLQLIADFTDLNVVVSDSVTGNITLRL-RNVPWDQALDI---ILR 351 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G + N + + L + + A D+A ++ Sbjct: 352 SKGLGMREAGNVIFVAPTEEIAAREKLEMESRKQVEELAPLRAEFIQVNYARADDVASII 411 Query: 145 RQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASA 202 R G++ +N L++ + + + +I R+D+ + + AS Sbjct: 412 RSDRTTFLSDRGSLTVDNRTNTLLVQDTEAKLADIRRLIDRLDIPVQQVLIETRIVIAS- 470 Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE 262 +D A L + T +I G E + + L +L V Sbjct: 471 DDFARDLGARFGVTGVGQTGRTQTFTTGNLSGTTE--MIRGDELSL--LNRLNTNLPVIS 526 Query: 263 SEEGNTRVYYLKYAKATNL---VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 G+ + L+ +L + G E + + ++ I E T Sbjct: 527 PSAGSIALSILRPDVLLDLEISALQVEGRGEIISSPRVITANGQTARIQQGERIPYQEAT 586 Query: 320 NS 321 +S Sbjct: 587 SS 588 >UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Burkholderia RepID=A2S716_BURM9 Length = 616 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 102/378 (26%), Positives = 174/378 (46%), Gaps = 29/378 (7%) Query: 219 KSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYA 276 +S ALL A +A R S+I P E A + + E +R + L+YA Sbjct: 263 RSAFDALLDAHGLAMARRGSVIWVAPVAELAERERQRFDAHARAAQLEPLASRGFVLRYA 322 Query: 277 KATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLAT 336 +A ++ +L G + + K ++ AD +TN L +T ++A Sbjct: 323 RAADVQRLLAGSAGQRILSK-------------RGSVLADPRTNLLFVTDLSGRLAQIAD 369 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADY 396 +I +LD QVL+EA IVE G NLG + A + A + + N Sbjct: 370 LIGKLDTPSRQVLIEARIVEGDRGFSRNLGARLALRAPDAGERATGIVAGRNGTLAELAA 429 Query: 397 KKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLA 456 + G +A +F+A + V L+AL + + I+++P +VT D A Sbjct: 430 RPISGFDAATAGLTLFAA-------RASRLLDVELSALEAEGRGQIVSSPRVVTADRTKA 482 Query: 457 SFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS 516 G ++P + N + V+ + KL+V PQ+ V+L+++ SV Sbjct: 483 VVEQGAELPYQAKV-----GNGVSGVQFRRATLKLEVEPQITPDGRVILDLDVAKDSVGE 537 Query: 517 SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYT 576 + S GP +T+ +Q V V+ G TV +GG+ + ++ V++VPLLG IP++G LFR+ Sbjct: 538 ETAS--GPAIHTKHVQTRVEVENGGTVSIGGIFESDDRDDVTRVPLLGKIPVLGALFRHR 595 Query: 577 STERAKRNLMVFIRPTII 594 + + L+V+I PT++ Sbjct: 596 AQRAQRSELVVYITPTVV 613 Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 72/188 (38%), Gaps = 11/188 (5%) Query: 8 TCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 T + +N N A + + + G I++ V+GT+S+R Sbjct: 199 TASVAGTGTETGDPSGDNRPISINLQQASLAAVFDAFARFTGLNIVVSERVRGTVSLR-- 256 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 + + F ++LD +G ++ + + + +R + L + Sbjct: 257 --LNNVRWRSAFDALLDAHGLAMARRGSVIWVAPVAELAERERQRFDAHARAAQLEPLAS 314 Query: 128 RIVPLENVPARDLAPLL-----RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 R L A D+ LL ++++ G+V+ +N+L +T + + ++ ++I Sbjct: 315 RGFVLRYARAADVQRLLAGSAGQRILSK--RGSVLADPRTNLLFVTDLSGRLAQIADLIG 372 Query: 183 RVDVIGTE 190 ++D + Sbjct: 373 KLDTPSRQ 380 >UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter RepID=B9M3I8_GEOSF Length = 911 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 87/404 (21%), Positives = 167/404 (41%), Gaps = 35/404 (8%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRI- 251 ++ +L + A+D+ ++ + + +L K + + +++ P+ Q Sbjct: 540 EVSNLNFLIADDVTGTISIKLVNVPWDQALDVILDTKGLGMLKEGNIVQIKPKAKMQSQA 599 Query: 252 -TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 + E E T ++ + YA T++ + D Sbjct: 600 DEEMATKKARERGMELRTEIFDVNYAAVTDIATQFGTLKS------------------DR 641 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 I+ D +TN +++ + E + ++ LD QV++EA IVE +LGVQW Sbjct: 642 GIISTDARTNRVIVKDITTAIEDMRMLLKSLDTPEKQVMIEARIVEASTSFVRDLGVQWG 701 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + + G G + P + ++ +A+ N + Sbjct: 702 IHYIDGSASVAGISRLDTGFGGQVAIAPTSGTSG--PGAAVGMSFGKLAS---NIQLDMR 756 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 L+A + ++ I++TP +VTL+NK A + G +P + S E Sbjct: 757 LSAAVTADQIKIMSTPRVVTLNNKPAKISQGASIPYQTTSAEG------TKTEFVEAALT 810 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 L+VTP + ++ ++I+ ++S+ + P N + +L+K GET V+GG+ Sbjct: 811 LEVTPHITSDGSIGMKIKAS----NNSAGTGSPPPINKKEATTELLIKNGETTVIGGIYV 866 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 D E VP L DIPL+G LF+ + ++K L++FI P I+ Sbjct: 867 DSDTESDKGVPFLQDIPLLGWLFKSNTKNKSKNELLIFITPKIV 910 Score = 75.4 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 6/169 (3%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + F++ADIR+ +++ + LI V GTIS++ + + IL Sbjct: 518 SGRKVTLEFSDADIRKIFQLIAEVSNLNFLIADDVTGTISIKLVN-VPWDQALDV---IL 573 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 D G ++ N ++ + +A G EL T I + D+A Sbjct: 574 DTKGLGMLKEGNIVQIKPKAKMQSQADEEMATKKARERGMELRTEIFDVNYAAVTDIATQ 633 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 + G + +N +I+ + I + ++K +D + Sbjct: 634 FGTL--KSDRGIISTDARTNRVIVKDITTAIEDMRMLLKSLDTPEKQVM 680 >UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein n=19 Tax=Francisella RepID=Q14H71_FRAT1 Length = 594 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 131/618 (21%), Positives = 245/618 (39%), Gaps = 56/618 (9%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 K L + L L + E +N + +IVG+ K + D ++ Sbjct: 6 KKLLVVLTILDGILGYDVSVADTKESQVSNQPQTSEQPVAKIVGREENKDKVTDKHIKD- 64 Query: 62 ISVRSNDTFSQQEYYQF-FL----------SILDLYGYSVITLDNGF---LKVVRSANVK 107 + + + + ++ F + L GY++ N K V + + K Sbjct: 65 --LEFHRSLNGSAVFEVAFEENISNFSGYKTKLSQDGYTLTITFNDTTISYKWVSNIDTK 122 Query: 108 TSPGMIADSSRPGVGDELVTRIVPLENVPARDLA--PLLRQMMDAGSVGNVVHYEPSNVL 165 ++ G +V I L+ + D + + +D + V + + + Sbjct: 123 VFNTIVDSIKIFKEGKSVVFVIHSLDRISLSDFKEGNIFKFKIDRRN-SRVEGFNVNEPI 181 Query: 166 ILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPAL 225 ++ + + + +++V+ + +H +++ L + M + Sbjct: 182 SISFKDAPVQTVLQVLSEFAGLNLVVSSSVH------GNISIDLKNVPWNEV----MNIV 231 Query: 226 LSAKIVADKRTNSL--IISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVE 283 L +K +A K+ +S+ + + E A Q L +E + T L Y A Sbjct: 232 LVSKGLATKKMSSILYVATAAEIAAQEQLELQTKRSLENNATLVTEFIPLNYTTAQAAQT 291 Query: 284 VLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDI 343 V+T ++ K + +ITAD +TN+L++T + ++ V+ +DI Sbjct: 292 VITSMA-----------KQNGGIMSPRGSITADARTNTLIVTDTEEKLPRIKEVVNEIDI 340 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT 403 QVL+EA IVEV + L LG + + + N GL FN+ A G Sbjct: 341 PNDQVLIEARIVEVLRTSALELGFNYGVVDPSGR--VNIGLDTFNSNPNPAPGPTPGPTP 398 Query: 404 SANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 + + +A + + AL S + + +A+P +V +N++A G+D Sbjct: 399 TPVDTFVGTTAKLAYTIA-GGVRLEMEVRALESESLAEEVASPHLVVANNQVAFIKDGED 457 Query: 464 VPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS-----S 518 VP + + + + +L+VTPQ+ ++++I +SV +S Sbjct: 458 VPYNQATASGAAAVA-----FQEAVLELQVTPQIAPDGNIIMDILVTKNSVGASPGKTPQ 512 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 L P R I V+ K G+TVV+GG+ KE+ +K+P LGDIP +G LF YT Sbjct: 513 GGDLPPIIKKREITTKVMTKDGDTVVIGGIYQKTQKEERNKIPFLGDIPYLGYLFSYTKI 572 Query: 579 ERAKRNLMVFIRPTIIRD 596 L++FI P II Sbjct: 573 TDQDSELLIFITPKIIES 590 >UniRef50_D0SET7 Type IV pilus biogenesis and competence protein pilQ n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SET7_ACIJO Length = 390 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 96/403 (23%), Positives = 176/403 (43%), Gaps = 27/403 (6%) Query: 202 AEDLAE-ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSL 258 A D + + + + + ++ K + +R ++I P E + Sbjct: 3 ASDTVQGNITLRLKDVPWDQALDIIMKTKNLDKRRNGNVIWIAPVAELIKSEEEEAKAIA 62 Query: 259 DVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS----SGAMDNVAIT 314 + T L YAK+ +++++L + E S S + Sbjct: 63 QSIKLSPIQTDYIQLSYAKSADVLKLLEDSRDSKGGESNRTAGSDSLALESLLSARGSAV 122 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 +D +TN+L+I Q +K+ +I LD+ QV+VEA IV LG++W+ K + Sbjct: 123 SDSRTNTLIINDRQQNIDKIRRMIDLLDVAVKQVMVEARIVTASTDFSRELGIKWSAKKL 182 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTAL 434 G N+ D++ + + + A + +N + + L+AL Sbjct: 183 G------------NSPVWGGDFQPSFDL-GVDLATNTAGTFNFGLLKISDYMLNLELSAL 229 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVT 494 ++ ++L+ P ++T D + A G ++P + S T E + KL+VT Sbjct: 230 QADGHGEVLSAPKVLTGDKQKAYILRGTEIPYQTWSATEGLKT-----EFRAANLKLEVT 284 Query: 495 PQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSK 554 P + V + ++ E +V + +++ G NT ++ VLV GETVVLGG+ DD + Sbjct: 285 PSITPDGKVQMALKIEKDTVGTLTSA--GYLINTNELETNVLVDDGETVVLGGIFDDIKQ 342 Query: 555 EQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 Q KVP GD+P+VG LF+ + A+ L++F+ P I+ D Sbjct: 343 NQYEKVPFFGDLPVVGALFKNNTRSSAQTELLIFVTPRIVNDS 385 >UniRef50_Q0VMB7 Fimbrial assembly protein pilQ n=3 Tax=Gammaproteobacteria RepID=Q0VMB7_ALCBS Length = 723 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 92/416 (22%), Positives = 167/416 (40%), Gaps = 59/416 (14%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 +L K + ++ ++++ P E A + L +E T + YA A+ L Sbjct: 328 ILKTKGLDKRQVGNVLLVAPADEIAAREQLELESQKKIEALAPLRTEYININYANASELK 387 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 E+++ NA + ++ D++TN+L++ Q+ +++ +I +LD Sbjct: 388 ELIS-----------NAGGKGEALVSGRGSVVVDQRTNTLIVQDTQAKLQEIRELIDQLD 436 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIF--------------N 388 I QVL+EA +V + GV+W + G N Sbjct: 437 IPVQQVLIEARVVVATNDVTDEFGVRWGGLGFDTESMLEDGRTFGVSGRLQSLRNLHQTN 496 Query: 389 AAQGVADYKKNGG-----------------------ITSANPAWDMFSAYNGMAAGFFNG 425 +A GG I S + +G Sbjct: 497 IDATIAYPDTVGGHPGDVEFGPDDFQFQEAENDDDLIVDLGVDSASASRFAVGFTSLASG 556 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 + L+AL + +++ATP ++T D + A GQ VP + + + +++ Sbjct: 557 LIELELSALEAEGHGELVATPKVLTADQQPAVIASGQQVPFEIATSSGA-----TSIDFV 611 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 +L+VTP + +++ ++ S S ++ NT ++ +VLV GETVVL Sbjct: 612 EAELRLEVTPHITPDGNIIMMLKVNNDSFSSDGSA----AINTNRVETSVLVNDGETVVL 667 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 GG+ V+K P LGD+P +G LFR T K+ L++FI P +++D R Sbjct: 668 GGIFQQEKINSVTKTPFLGDLPWIGALFRKTVNRDNKQELLIFITPRLMKDALANR 723 Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 64/168 (38%), Gaps = 9/168 (5%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ NF + ++R ++++ G ++ +V G I++R + + + IL Sbjct: 275 GEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVDGRITLRLQN-VPWDQALEL---ILK 330 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G + N L + + L T + + A +L L+ Sbjct: 331 TKGLDKRQVGNVLLVAPADEIAAREQLELESQKKIEALAPLRTEYININYANASELKELI 390 Query: 145 RQMMDAG-----SVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 G G+VV + +N LI+ + + ++ E+I ++D+ Sbjct: 391 SNAGGKGEALVSGRGSVVVDQRTNTLIVQDTQAKLQEIRELIDQLDIP 438 >UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYV5_DESOH Length = 538 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 103/402 (25%), Positives = 176/402 (43%), Gaps = 29/402 (7%) Query: 219 KSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKA 278 K LL + R + Q+ ++ + ++ E T+V++LKY++A Sbjct: 143 KEAFAGLLRTHGLTYNRIGDTLRIKTLADIQQDFAIENAYRKQQGERSVTQVFFLKYSEA 202 Query: 279 TNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVI 338 ++ +L V+ + +G S + D++ N++++ E+ A +I Sbjct: 203 ADVANLLKPVTARAASAEGVKEAQQS--------VVVDKRNNAVIVHTPLPGIEQCAALI 254 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKK 398 ++D QVL+EA IVE LG+QW Q TG A Q + + Sbjct: 255 RQIDRPTRQVLIEAHIVETSKDTARQLGIQWGGVAKDKQHSWFTGATEGPAGQTL--FDA 312 Query: 399 NGGITSANPAWDMFSAY------NGMAAGFFNGDWG-----VLLTALASNNKNDILATPS 447 NG +ANP + + + G++ G+ D G LTAL + K +IL++PS Sbjct: 313 NGVPVAANPTGNWAANFPASLGNTGLSLGYIYQDLGQSLIAAQLTALEEDGKLNILSSPS 372 Query: 448 IVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 I TLDN A G+DVP + ++ +E K L VTP + + + ++I Sbjct: 373 ITTLDNSAAVIESGRDVPFQTV------EDNEVNIEWKKAVLSLAVTPHIIDASTLRVKI 426 Query: 508 EQEVSSVDSSSNS--TLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGD 565 + +D S+ PT T+ + +++ G+T V+GGL S + VPLLG Sbjct: 427 KTHKDELDWSNAVLTDGNPTIITKNAETEMILFDGQTTVIGGLNKQSSSQSQFGVPLLGR 486 Query: 566 IPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 IP++G FR TS +++FI P I+ +K Sbjct: 487 IPILGFFFRSTSRSNDMEEVLIFITPHILEPYTAATGAGADK 528 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 74/174 (42%), Gaps = 14/174 (8%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 + + + DI + + + GK I+I V G ++ + +E F +L Sbjct: 96 DTPVTIHMTDTDIAVILRALTKAAGKNIIIGAGVSGRANINAEG-VPWKEA---FAGLLR 151 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 +G + + + L++ A+++ I ++ R G+ VT++ L+ A D+A LL Sbjct: 152 THGLTYNRIGD-TLRIKTLADIQQD-FAIENAYRKQQGERSVTQVFFLKYSEAADVANLL 209 Query: 145 RQMMDAGSVG--------NVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 + + + +VV + +N +I+ I + +I+++D + Sbjct: 210 KPVTARAASAEGVKEAQQSVVVDKRNNAVIVHTPLPGIEQCAALIRQIDRPTRQ 263 Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 6/134 (4%) Query: 192 QQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRI 251 Q+ L+Y+ A D+A +L + + + + +V DKR N++I+ P ++ Sbjct: 192 TQVFFLKYSEAADVANLLKPVTARAASAEGVKE-AQQSVVVDKRNNAVIVHTPLPGIEQC 250 Query: 252 TSLLKSLDVEESEEG-NTRVYYLKYAKATNLVEVLTGVSEKLKDE--KGNARKPSSSGAM 308 +L++ +D + + A L GV++ + G P+ Sbjct: 251 AALIRQIDRPTRQVLIEAHIVETSKDTARQLGIQWGGVAKDKQHSWFTGATEGPAGQTLF 310 Query: 309 D--NVAITADEQTN 320 D V + A+ N Sbjct: 311 DANGVPVAANPTGN 324 >UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter RepID=B5E8I3_GEOBB Length = 946 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 95/404 (23%), Positives = 161/404 (39%), Gaps = 35/404 (8%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRI- 251 ++ +L + A+D+ ++ + + +L AK +A R +++ P Q Sbjct: 575 EVSNLNFLIADDVTGTISIKLVNVPWDQALDVILDAKGLAMVREGNIVQIKPRSKMQNQA 634 Query: 252 -TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 L E E T V+ + YA ++ + D Sbjct: 635 DEELAAKKAAERLMELKTMVFEVNYASVNDVAMQFGMLKS------------------DR 676 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 IT DE+T+ +++ Q+ + ++ LD QV++EA IVE +LGVQW Sbjct: 677 GVITKDERTSRVIVKDIQTALNDMKALLKTLDAPEKQVMIEARIVEATSTFTRDLGVQWG 736 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + GV G + M N + Sbjct: 737 LSYRDGSASVAGINSVDTGFGGVVSAAGPGSSGAGGLGLGM-----SFGKLTSNIKLDMR 791 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 L A A+ + I++TP +VTL+NK A + GQ +P + S E Sbjct: 792 LAAAATIGQVKIISTPKVVTLNNKAAKISQGQSIPYQTTSAEG------TKTEFVEAALT 845 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 L+VTP + +V ++I+ +S + S P N + ++V G+T V+GG+ Sbjct: 846 LEVTPHITADGSVSMKIKASNNSPGTGS----PPPINKKEATTELVVSNGDTTVIGGIYV 901 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 D E + VP L DIPL+G LF+ S ++ K L++FI P I+ Sbjct: 902 DSDTESDTGVPFLSDIPLLGWLFKSNSKQKTKTELLIFITPKIV 945 Score = 73.1 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 64/168 (38%), Gaps = 6/168 (3%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 + F++AD+R+ +++ + LI V GTIS++ + + ILD Sbjct: 554 GRRVTLEFSDADVRKIFQLIAEVSNLNFLIADDVTGTISIKLVN-VPWDQALDV---ILD 609 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G +++ N RS + +A EL T + + D+A Sbjct: 610 AKGLAMVREGNIVQIKPRSKMQNQADEELAAKKAAERLMELKTMVFEVNYASVNDVAMQF 669 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 + G + E ++ +I+ + +N + ++K +D + Sbjct: 670 GML--KSDRGVITKDERTSRVIVKDIQTALNDMKALLKTLDAPEKQVM 715 >UniRef50_C6Q9T0 General secretion pathway protein D n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9T0_9RHIZ Length = 773 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 129/571 (22%), Positives = 233/571 (40%), Gaps = 40/571 (7%) Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 +S+ + S + + ++ ++ N L + + S I Sbjct: 193 VSIFALRYVSTEAMMRMLDGLMVKQEDLRASVFNNMLFIRGPGQSRQSIVEIVSMFDVDW 252 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVH-----YEPSNVLILTGRASTINK 176 I L+N D+ L+Q+ G + + VL+L R+ T++K Sbjct: 253 MKGQSAGIFKLDNASPDDVIRELKQVFQTDRQGRGLVKFQTIGRLNAVLVLAPRSQTVDK 312 Query: 177 LIEVIKRVDVIG--TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADK 234 + E I R+D G + + +E A+DLA +L + K VA Sbjct: 313 VGEWISRLDHSGADDDNYYVYRVENGRAKDLARLLMAAFTGGGAAGGSGRGAEEKEVA-P 371 Query: 235 RTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV-----EVLTGVS 289 + S + + + T L A+ + ++ Sbjct: 372 TLAASRTSSGSSFGSSSSGTGSNSNSGPLSGSTTGSTSLGGGDASGSSNGSPLKGAPTLA 431 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 ++ + S++ + D V +T DE+ N L+I A + +K+ ++ R+D QVL Sbjct: 432 SAEEEPADEGPQSSAATSSDQVRVTPDERNNKLLIKASERNYKKILQILHRVDQPPLQVL 491 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW 409 + A + EV L GVQ+ + + +G F+ + +A G+ Sbjct: 492 INATLAEVTLNKNLQYGVQFFLQKNHGK----SGGIGFSTSDALAIAPVMPGLN------ 541 Query: 410 DMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS- 468 + AG D V+L ALA I+++PS+V L N+ A VG VP+++ Sbjct: 542 --------LIAGNIGSDPRVILDALAKETAVRIVSSPSVVVLHNQQAILEVGDQVPIITR 593 Query: 469 --GSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN-----ST 521 S N +E K G L VTP++N V +E++QEVS+V ++S ++ Sbjct: 594 EAQSVINPDSPTVNEIEFKNTGVILNVTPRINSNGLVTMEVQQEVSAVQNTSGQSDAATS 653 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ-LFRYTSTER 580 L PT + R + + + V++G+ VVLGGL+ + S +P++ IP +G L T R Sbjct: 654 LTPTISQRRVTSTIAVQSGQMVVLGGLIREEVSRSKSSIPVINKIPYLGDVLGGETDNGR 713 Query: 581 AKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 + L+VFIRP +IR+ + + ++ Sbjct: 714 TRTELVVFIRPIVIRNPEDASNAAEALRAGM 744 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 14/268 (5%) Query: 24 ENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 Y NF++ D+ + V++V LG T + D ++G +S+ + ++ E SI Sbjct: 88 NASGYELNFSDTDLSELVKVVLKDTLGITYVFDSHIEGRVSISTGGPVTRAELISILESI 147 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG--VGDELVTRIVPLENVPARDL 140 L ++ + ++NG +VV A+ + D R VG I L V + Sbjct: 148 LATN-HAALLIENGVYRVVPEADARQQGISAFDYVRESREVGAGYGVSIFALRYVSTEAM 206 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHLE 198 +L +M + +N+L + G + ++E++ DV + Q I L+ Sbjct: 207 MRMLDGLMVKQEDLRASVF--NNMLFIRGPGQSRQSIVEIVSMFDVDWMKGQSAGIFKLD 264 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP-EKARQRITSLLKS 257 AS +D+ L Q+ + K R N++++ P + ++ + Sbjct: 265 NASPDDVIRELKQVFQTDRQGRGL-----VKFQTIGRLNAVLVLAPRSQTVDKVGEWISR 319 Query: 258 LDVEESEEGNTRVYYLKYAKATNLVEVL 285 LD +++ N VY ++ +A +L +L Sbjct: 320 LDHSGADDDNYYVYRVENGRAKDLARLL 347 >UniRef50_Q1K2X4 Type II and III secretion system protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2X4_DESAC Length = 727 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 111/556 (19%), Positives = 212/556 (38%), Gaps = 64/556 (11%) Query: 50 KTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTS 109 + ++ ++G + + S+ F ++ ++ + + + V+ S Sbjct: 224 RNVMFSAKMKGLV----QYSVSRNGSQLVFSTVDGVFAETAPSALDSVYVPVQPTKAAQS 279 Query: 110 PGMIADSSRPGVGDEL----VTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVL 165 G++ S P + V+++ L + A LL D + + VL Sbjct: 280 NGIVETISDPAYAYDENMDDVSQV--LNRIEGESAAGLLSATADKDAPKVYTGEPVTLVL 337 Query: 166 ILTGRASTINKLIEV-----IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKS 220 + + E+ I DV G ++ + + A DL + QL + + G Sbjct: 338 DDADIRKVMQLIAEISNLNIILSDDVKGKVSLRLHDVPWDQALDLILDVKQLGTITQGNV 397 Query: 221 QMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATN 280 +I+ + L + D+++ EE T ++ + Y Sbjct: 398 -------VRILPLG----------TIKKMEAERLKATKDIKKLEETRTEIFVINYKDTEA 440 Query: 281 LVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIAR 340 + +V+ V + + E + +++ S E++ +I + Sbjct: 441 IEDVIDDVLSNQGE------------------VQLIEGSKKIMVNDIPSKLEEIRMLINQ 482 Query: 341 LDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK--NVGAQQFTNTGLPIFNAAQGVADYKK 398 LD QVL+EA IVE G+ W + N G + NA G+ Sbjct: 483 LDEPVKQVLIEARIVEADTSAEQTFGIHWGFEFDNDSGSSGGGIGSSLDNAVVGLG---- 538 Query: 399 NGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASF 458 IT + + +A G + L+AL S+ ++++P ++ LD + A Sbjct: 539 GNFITPTSATDGLGTALTFGRVGLDTIVLDLQLSALESSGGGKVISSPKVMALDGETARI 598 Query: 459 NVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS 518 G ++P + S T E K L+VTP +N + +LLEI SS Sbjct: 599 GQGTEIPYKTTSDNG------TTTEFKKAELALEVTPLINPDNTILLEILATNSS--PGV 650 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 T G NT+ + +L+K GET V+GG+ + + S P L D+P +G LF+Y ++ Sbjct: 651 AYTDGVAINTKEAETKLLLKNGETTVIGGIYTENEQNSDSGTPYLKDLPFIGNLFKYKTS 710 Query: 579 ERAKRNLMVFIRPTII 594 + L++F+ P I+ Sbjct: 711 SNDRTELLIFLTPHIV 726 Score = 75.8 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 68/164 (41%), Gaps = 8/164 (4%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E ++ADIR+ ++++ + I++ V+G +S+R +D + ILD Sbjct: 330 GEPVTLVLDDADIRKVMQLIAEISNLNIILSDDVKGKVSLRLHD-VPWDQALDL---ILD 385 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG-DELVTRIVPLENVPARDLAPL 143 + IT N ++++ +K +++ +E T I + + + Sbjct: 386 VKQLGTITQGN-VVRILPLGTIKKMEAERLKATKDIKKLEETRTEIFVINYKDTEAIEDV 444 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 + ++ G V E S +++ S + ++ +I ++D Sbjct: 445 IDDVLSNQ--GEVQLIEGSKKIMVNDIPSKLEEIRMLINQLDEP 486 >UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax=Methylophilaceae RepID=Q1GYG5_METFK Length = 723 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 95/444 (21%), Positives = 188/444 (42%), Gaps = 60/444 (13%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ + L + + + ++S+K + ++T ++I P E A + L Sbjct: 301 LNIVTSDTVTGNLTLRLKDVPWDQALDIIMSSKGLTQRKTGNVIWVAPSDEVAAKEKLLL 360 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 S +EE E T V+ L+Y KA N +++ +K+ ++G+A Sbjct: 361 EASQQIEELEPMRTEVFTLRYQKAENFKNIISDSKQKILSKRGSA--------------V 406 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 D +TN++ + E++ ++I ++DI QV++E+ +V + G +LG ++ + Sbjct: 407 VDARTNTVFVQDTAKHLEEVQSIINKIDIPVKQVMIESRLVIADEKFGRSLGARFGVQKQ 466 Query: 375 GAQQFTNTG---------------------------------LPIFNAAQGVADYKKNGG 401 A T G L + V G Sbjct: 467 QASGDTRYGSSGTLGNTITQRTVDPTTGVITETIANRVGSSTLATTSIPGTVGVGVSPDG 526 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGD----WGVLLTALASNNKNDILATPSIVTLDNKLAS 457 N + +A+ A F + L+AL ++ + I+++P + T + + A Sbjct: 527 AQDLNVNLPVANAFGNFAFSLFRLPAGFLLNLELSALETDQRGKIVSSPRVTTANQQKAI 586 Query: 458 FNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS 517 G +P + + + V+ K L+VTPQ+ + +++++E + V Sbjct: 587 IEQGTQIPFQQATSSGA-----TAVQFKNASLSLEVTPQITPDEKIIMDLEVKKDKVGVV 641 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 N+ P+ +T+ +Q VLV GET VLGG+ + + V KVP GD+P +G +F+ Sbjct: 642 FNNV--PSIDTQRVQTQVLVANGETAVLGGIYEQTERNDVDKVPFFGDLPFLGNVFKRRV 699 Query: 578 TERAKRNLMVFIRPTIIRDDDVYR 601 + K L++FI P ++ + R Sbjct: 700 KQSDKTELLIFITPKVMDESLSLR 723 Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 63/172 (36%), Gaps = 10/172 (5%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ NF N D+R ++++ G I+ +V G +++R + I+ Sbjct: 276 GEKLSLNFQNIDVRSVLQVIADFTGLNIVTSDTVTGNLTLRL-KDVPWDQALDI---IMS 331 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G + N ++ S + + + T + L A + ++ Sbjct: 332 SKGLTQRKTGNVIWVAPSDEVAAKEKLLLEASQQIEELEPMRTEVFTLRYQKAENFKNII 391 Query: 145 ----RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 ++++ G+ V +N + + A + ++ +I ++D+ + Sbjct: 392 SDSKQKILSK--RGSAVVDARTNTVFVQDTAKHLEEVQSIINKIDIPVKQVM 441 >UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 Tax=Acinetobacter RepID=B2I0J4_ACIBC Length = 721 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 100/454 (22%), Positives = 184/454 (40%), Gaps = 43/454 (9%) Query: 183 RVDVIGTEKQQIIHL-------EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKR 235 +D E ++++ L +A+ + + + + + +L K + +R Sbjct: 265 SLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNLDKRR 324 Query: 236 TNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK 293 ++I P E + + T LKYAKA +++ ++T S Sbjct: 325 NGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAKAGDIMGLITQGSNNSN 384 Query: 294 DEKGNA-----------------RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLAT 336 + + S IT D++TN+L+I +++ Sbjct: 385 GLQHTSGGGTSTSTNLNTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIRK 444 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN-----TGLPIFNAAQ 391 +I LD++ QV+VEA IV LGV+W + G N + ++N + Sbjct: 445 MIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGILSQGITNNNNLLVGGSETTLWNLRE 504 Query: 392 GVADYKKNGGITSA------NPAWDMFSAYNGMAAGFFNGD---WGVLLTALASNNKNDI 442 D G + N + + +A G + + L+AL ++ ++ Sbjct: 505 PKKDETTGGYKYTIERPDNLNVDLGVSNPAGSIAFGLISMSDFMLDLELSALQADGYGEV 564 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDA 502 ++TP ++T D + A GQ VP S + + +G + K L VTP + Sbjct: 565 ISTPKVMTADKQTAKVATGQQVPYQSTTNSAAGSTATTS--FKDALLSLNVTPSITPDGK 622 Query: 503 VLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPL 562 + ++++ SV ++ + N I VLV GETV+LGG+ + + +KVP Sbjct: 623 IQMKLDISKDSVAGAAPNGEL-ILNKNNINTNVLVDNGETVILGGVFEQTTMNSQTKVPF 681 Query: 563 LGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 GDIP+VG+LFR K+ L++F+ P I+ D Sbjct: 682 FGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVND 715 Score = 60.0 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 82/260 (31%), Gaps = 55/260 (21%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + +F + ++R+ ++++ G ++ SVQG I++R + IL Sbjct: 260 SGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRL-KDVPWDQALDI---IL 315 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 N + +K ++ L T + L+ A D+ L Sbjct: 316 KTKNLDKRRNGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAKAGDIMGL 375 Query: 144 LRQ-----------------------------------MMDAGSVGNVVHYEPSNVLILT 168 + Q ++ G + + +N LI+ Sbjct: 376 ITQGSNNSNGLQHTSGGGTSTSTNLNTGVDSLGNNVGSLLSP--RGTITQDDRTNTLIIN 433 Query: 169 GRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSA 228 A +I+++ ++I +DV + + AS E+ + S G + Sbjct: 434 DTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGILSQGITN------- 486 Query: 229 KIVADKRTNSLIISGPEKAR 248 N+L++ G E Sbjct: 487 -------NNNLLVGGSETTL 499 >UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein pilQ n=31 Tax=Bacteria RepID=PILQ_NEIG1 Length = 723 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 86/378 (22%), Positives = 163/378 (43%), Gaps = 13/378 (3%) Query: 220 SQMPALLSAKIVADKRTNSLIISGPEKAR--QRITSLLKSLDVEESEEGNTRVYYLKYAK 277 + ++ A+ + ++ +++ P + L D+ + ++ + LKY Sbjct: 347 QALDLVMQARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKN 406 Query: 278 ATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATV 337 +L + + ++ ++ D TN+L++T +SV EK + Sbjct: 407 VEEFRSILR-------LDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKL 459 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 I LD+ QV++EA IVE DG +LGV++ + T + G Sbjct: 460 IDELDVPAQQVMIEARIVEAADGFSRDLGVKFGATGR-KKLKNETSAFGWGVNSGFGGGD 518 Query: 398 KNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 K T N + + +G + L+A S +K LA P ++T + K A Sbjct: 519 KWEAQTKINLPVAAAANSISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAK 578 Query: 458 FNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS- 516 G ++P T SG E K L VTP + +++ ++ S Sbjct: 579 IESGYEIPFTV--TTASGGGNSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQC 636 Query: 517 SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYT 576 +S + +T+++ +V+ G T+++GG+ ++ + ++KVPLLGDIP++G LF+ Sbjct: 637 ASGNNTILCISTKSLNTQAMVENGGTLIVGGIYEENNGNTLTKVPLLGDIPVIGNLFKTR 696 Query: 577 STERAKRNLMVFIRPTII 594 + +R L++FI P II Sbjct: 697 GKKTDRRELLIFITPRII 714 Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 13/177 (7%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 + +F + +IR ++I+ + G I+ SV G +++ S + ++ Sbjct: 299 GRKISLDFQDVEIRTILQILAKESGMNIVASDSVSGKMTL-SLKDVPWDQALDL---VMQ 354 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 + N R + + L ++ L+ + +L Sbjct: 355 ARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRSIL 414 Query: 145 RQMMDA---------GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 R G+V+ +N LI+T S I K ++I +DV + Sbjct: 415 RLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQVM 471 Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 7/135 (5%) Query: 132 LENVPARDLAPLLRQM--MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 L++VP L+ Q +D GN+V+ P + L+ +A ++ K + +G Sbjct: 340 LKDVPWDQALDLVMQARNLDMRQQGNIVNIAPRDELLAKDKA-----FLQAEKDIADLGA 394 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 Q L+Y + E+ IL +++ G ++ D TN+LI++ + Sbjct: 395 LYSQNFQLKYKNVEEFRSILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIE 454 Query: 250 RITSLLKSLDVEESE 264 + L+ LDV + Sbjct: 455 KFRKLIDELDVPAQQ 469 >UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FD61_DESAA Length = 566 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 99/362 (27%), Positives = 163/362 (45%), Gaps = 28/362 (7%) Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR-KPSSSGAMDNVAIT 314 + L + E +V + YA LVE L + E ++ K SG++ ++ Sbjct: 186 QKLVAKSVEPLLMKVVQIDYADPEGLVEPLNSILATSAGENAASKSKNDKSGSVVRGSVD 245 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN--- 371 D+ NSLV+ A + EK+ +I +LD QV ++A IVE +LGVQW Sbjct: 246 VDKHNNSLVLMAVREDLEKMLALINKLDRPPYQVHIKANIVETTRDTARDLGVQWGWMYG 305 Query: 372 --KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM----------- 418 ++G + + D GG T+ + + NG+ Sbjct: 306 RYDSLGNDTDFWLTPGGNSGSAASRDAPLTGGYTAGTGSKGVSGQGNGINFPVDFEDAMG 365 Query: 419 -AAGFFNGDWG-----VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT 472 G G G V L+ALA K +IL+TPSI TLDN+ AS G +VP ++ ++ Sbjct: 366 ATMGLMFGKVGSNILEVQLSALADAGKINILSTPSITTLDNQTASTENGTEVPYVTINED 425 Query: 473 TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQ 532 V+ K L++TP V + + +++ + VD S N P + + Sbjct: 426 GD-----REVKFKDATLMLEITPHVIDEGQMKMKVSIKKDEVDLSRNVDGNPFILKKRTE 480 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 +++V+ GETVV+ GL + E + +P L DIP +G LF+ S A +++F+ PT Sbjct: 481 TSLIVRNGETVVISGLSKTRNTEGDTGIPWLKDIPGLGYLFKSESKSEAMEEVLIFLTPT 540 Query: 593 II 594 ++ Sbjct: 541 VL 542 Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 73/187 (39%), Gaps = 29/187 (15%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ ++++ + + + +G+ +LI+ +V G +SV + + FLSIL+ Sbjct: 94 SQPVTMRMKDSEVGVVLRAIARGVGQNLLINSNVSGRVSV----EVKAVPWNEVFLSILN 149 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG-------DELVTRIVPLENVPA 137 G + ++++ + +++ + R + L+ ++V ++ Sbjct: 150 SQGLR-YAWEGDIIRIMTAEDMEKDLAVQQVQERTKRQKLVAKSVEPLLMKVVQIDYADP 208 Query: 138 RDLAPLLRQMMDAGS-----------------VGNVVHYEPSNVLILTGRASTINKLIEV 180 L L ++ + G+V + +N L+L + K++ + Sbjct: 209 EGLVEPLNSILATSAGENAASKSKNDKSGSVVRGSVDVDKHNNSLVLMAVREDLEKMLAL 268 Query: 181 IKRVDVI 187 I ++D Sbjct: 269 INKLDRP 275 >UniRef50_Q5P5P1 Fimbrial type-IV assembly protein PilQ n=4 Tax=Betaproteobacteria RepID=Q5P5P1_AZOSE Length = 721 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 98/416 (23%), Positives = 177/416 (42%), Gaps = 42/416 (10%) Query: 209 LNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEG 266 L + + + +L AK + ++T ++I P E A + L + + E Sbjct: 325 LTLRLKDVPWDQALDIILQAKGLDMRKTGNVIWIAPSEELAMREKLQLEAQAQIGDLEPV 384 Query: 267 NTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITA 326 T + + Y KA + + L + + ++G ++ DE++N L +T Sbjct: 385 QTESFQINYHKAKEIFDFLKSKDQTMLSKRG--------------SVVMDERSNKLFVTD 430 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQ--FTNTGL 384 S + + ++ +D+ QV++EA IVE +LGV+ VG + F G Sbjct: 431 VVSRLDAIRRLVGEIDLLPRQVMIEARIVEANKDFARDLGVRLGVGGVGGRTVGFDANGR 490 Query: 385 PI--FNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD---------------- 426 PI G+ + N G T A + + G+ Sbjct: 491 PIRRATVGGGLENTGFNAGQTVAATDAQVATVPGGLNVNLPAPGGSGVLSAVLWNNTATR 550 Query: 427 -WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 + L+AL S+ + I+++P ++T + A G +P + + + +++ + Sbjct: 551 FLNLELSALESDGRGRIVSSPRVLTANQVEAVIEQGTKIPYPEKTSSGAA-----SIKFE 605 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 LKV PQ+ V L + D + + PT T+ IQ VLV+ G TVV+ Sbjct: 606 KAVLSLKVKPQITPEGRVQLFVLVNKDRPDFARSVEGTPTVVTKNIQTEVLVENGGTVVI 665 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 GG+ ++ + V+++PLLG++PLVG LFR T + L++FI P I+ D R Sbjct: 666 GGIYEEEETDSVTRIPLLGEVPLVGALFRNTIKNSKRSELLIFITPRIVADSLTLR 721 Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 10/182 (5%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 L+ G E+ NF N D+R ++++ I+ SVQG +++R + Sbjct: 278 LVQGSRGQYSGEKLSLNFQNIDVRSVLQVIADFTNFNIITSDSVQGNLTLRL-KDVPWDQ 336 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 IL G + N + ++ G + + T + Sbjct: 337 ALDI---ILQAKGLDMRKTGNVIWIAPSEELAMREKLQLEAQAQIGDLEPVQTESFQINY 393 Query: 135 VPARDLAPLLRQ----MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 A+++ L+ M+ G+VV E SN L +T S ++ + ++ +D++ + Sbjct: 394 HKAKEIFDFLKSKDQTMLSK--RGSVVMDERSNKLFVTDVVSRLDAIRRLVGEIDLLPRQ 451 Query: 191 KQ 192 Sbjct: 452 VM 453 >UniRef50_C0QUI7 Fimbrial assembly protein PilQ n=1 Tax=Persephonella marina EX-H1 RepID=C0QUI7_PERMH Length = 608 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 114/639 (17%), Positives = 237/639 (37%), Gaps = 77/639 (12%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDP-SVQGT- 61 + KIT +L +++ ++ A F A + F+++V + K I+ D +++ Sbjct: 1 MRKITFSILILMMVLTLKSFAQQRVTAEFYGAKLSTFIDVVSKLSNKNIVWDKEALKNKD 60 Query: 62 --ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 + + S + ++ L G + + N + + + ++ Sbjct: 61 NAVYLSIRKPTSIETLFRL---ALKENGLTYVREGN-LYIIKPAEEALIT---VSPVITK 113 Query: 120 GVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 +G E+ V L + + G + Y+ SN + + + K+ + Sbjct: 114 YLGKEIFESFVEL-------VEGNISP------TGEIKVYKTSNAIYVRDTKENVQKIKQ 160 Query: 180 VIKRVDVIGTEKQQIIHLEYASAEDLAEILN----QLISESHGKSQMPALLSAKIVADK- 234 +++ + + + E+ + + ++ S K K + D+ Sbjct: 161 LVEEYKKPLQREAEKLARLEEEREEELKKIRTKRAEIESLLIKKEVEIPYKDFKEIEDEL 220 Query: 235 --------------RTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATN 280 +T L + + +I+ ++ + + T+ YY++ + Sbjct: 221 VENLSSYGRYKYNKKTGKLTVIELKSNISKISKIIAK---AQKIDIKTKCYYVRALEPAE 277 Query: 281 LVEVLTG---------------VSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV-- 323 L+ + +S+ L EK + ++ A E+ +++ Sbjct: 278 LLITIKESYLTKYGSVIYKSKEISKALGVEKQTTGGTGGTTGGSTISSYATEKEKNIITS 337 Query: 324 -----ITADQSVQEKL-ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ 377 IT V +K+ L R Q+ +EA IV+++ +LG+QW G Sbjct: 338 LPKVCITDVPEVIDKIYKDFSEVLLKRPYQIAIEARIVQIESSYKRDLGIQWGFAASGGA 397 Query: 378 QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASN 437 G+ A + D+ G + A G+ + L+AL Sbjct: 398 GNIGYGVTTGTATGYMFDFPA-GNVDVGKGASMSIGIVRGLTT-----SLDIQLSALEQI 451 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQV 497 K+ IL+ P ++T+D + A + G +VP + V+ K KL V P+ Sbjct: 452 GKSRILSRPKVITIDGEGAEISQGIEVPYSTFGAAGG--AAIARVQFKKALLKLNVIPRT 509 Query: 498 NEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQV 557 +++ IE D P NT++I + V+ K G T+V+GG+L+ +E Sbjct: 510 TLDGNIIMNIELTQDVPDFGRAVNGQPPINTKSITSKVIAKDGTTIVIGGILEKTEQETE 569 Query: 558 SKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 + VP L ++PL G LF+ + L++FI P II + Sbjct: 570 NGVPGLRNVPLFGWLFKNKGINTTNKELLIFITPKIIYE 608 >UniRef50_C6HW33 Putative general secretion pathway protein D n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW33_9BACT Length = 565 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 96/379 (25%), Positives = 175/379 (46%), Gaps = 34/379 (8%) Query: 261 EESEEGNTR---VYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADE 317 E++ TR +Y L+ A ++ + + + K + G + I D+ Sbjct: 142 PETQAPPTREMFLYTLENTSAKSIAKTVNAILSKGFAPRP-VGGVREGGFDGPIQIVPDK 200 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN-----LGVQWANK 372 +NSL+++A E+L ++ LD + +V V+A ++E+ N LG + Sbjct: 201 SSNSLIVSATAHDYERLKPILHSLDAQPGEVYVKASLIEISTDKLNNIQVNLLGGVLGSN 260 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY----------NGMAAGF 422 N G TN G+ +G T A + + S NG+ AG Sbjct: 261 NSGVVGLTNYGMLGSIVNGATGASSLSGSTTGAAGSLGVVSGAAGAASALSGLNGLVAGV 320 Query: 423 FNG-----------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 G + G LL AL + + L+TP I+ D A +G+DVP ++G Sbjct: 321 LTGGTFKYNGVNYPNIGELLNALETYSDVRTLSTPEILATDGVKAKITIGEDVPFITGQS 380 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS----NSTLGPTFN 527 T G NV ++R+ VG L++TP + + V L+++Q +S++ ++S +GPT Sbjct: 381 QTVGGNVMTMIQRQNVGITLELTPHILSHNRVRLDVKQTISALTNASQVIGTIAVGPTTT 440 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 R+ + + + +G+TVV+GGL+ + +P L DIP++G LF T+ E+ + +L++ Sbjct: 441 KRSAKTNLTISSGQTVVIGGLISKETSINDQGIPFLSDIPILGYLFSNTNNEKKRDDLLI 500 Query: 588 FIRPTIIRDDDVYRSLSKE 606 F+ P +IR+ + + Sbjct: 501 FLTPYVIRNAQDLAVVKHD 519 Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 77/215 (35%), Gaps = 31/215 (14%) Query: 26 EQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDL 85 ++ NF N D+ V + + L + I++D V+G +++ S + E ++ F L + Sbjct: 67 QKVSMNFRNVDVSVLVRFMSELLQQNIVMDERVKGKLTILSPAEVTVPEAFRIFSDALRM 126 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 G+ ++ +V + M + LEN A+ +A + Sbjct: 127 KGFEAVSKKGMIY-IVPETQAPPTREMF---------------LYTLENTSAKSIAKTVN 170 Query: 146 QMMDAG---------------SVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 ++ G +V + SN LI++ A +L ++ +D E Sbjct: 171 AILSKGFAPRPVGGVREGGFDGPIQIVPDKSSNSLIVSATAHDYERLKPILHSLDAQPGE 230 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPAL 225 L S + L I L+ G + + Sbjct: 231 VYVKASLIEISTDKLNNIQVNLLGGVLGSNNSGVV 265 >UniRef50_A6GPK2 Pili assembly protein PilQ n=1 Tax=Limnobacter sp. MED105 RepID=A6GPK2_9BURK Length = 681 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 109/556 (19%), Positives = 209/556 (37%), Gaps = 85/556 (15%) Query: 51 TILIDPSVQGTISVRSNDTFSQQEYYQ---FFLSILDLYGYS-VITLDNGFLKV-VRSAN 105 + + P V + + + +Q E + L G + ++ ++V + A Sbjct: 202 NVRLAPGVALQLQIPGDSPIAQLELKPGDLALTVQMQLNGATHLVRQRGPVVEVELSPAQ 261 Query: 106 VKTSPGMIADSSRPGVGDELVTRI----VPLENVPARDLAPLLRQMMDAGSVGNVVHYEP 161 K +P + +V R + L+ A D +V V Sbjct: 262 NKAAPTKAIELKAVTSAQSVVARYTGRPITLDFKDA-----------DIRTVMQVFADFT 310 Query: 162 SNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQ 221 L+L+ + DV + I+ Sbjct: 311 KMNLVLSDSVQG----KVTVFLKDVPWDQALDIV-------------------------- 340 Query: 222 MPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNL 281 + S +V+ + N L++S P +E E ++V+ + Y K +L Sbjct: 341 ---MRSKGLVSSQAGNVLLVSTPTDVTNDQFQTANRRAQDEMEPLVSKVFQVSYQKTADL 397 Query: 282 VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 V ++ KL +G + +DE+T+ + + + E+++ ++ L Sbjct: 398 VALIKSEDSKLLSARGT--------------LISDERTSQIFVQDTPTRLERISMIVNGL 443 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 D QV++EA +V +LG++ + A + G G ++ G Sbjct: 444 DKPVKQVMIEARVVLADTSVSRDLGIRLRALSARA----DPGFDEVGDQFGSGNFVNTGV 499 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 + N + +F+A + + L AL NK ++ P ++T + + A G Sbjct: 500 ENATNLGYTLFNANS-------TRLINLQLRALELENKVRTVSNPRVITSNKEPALIEQG 552 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST 521 ++P + + + E K KL VTPQ+ VLL+++ S+ +++ Sbjct: 553 TEIPYQIATSSGATAT-----EFKEANLKLAVTPQIAPDGTVLLDVDVAKDSIGIETSN- 606 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 GP +TR ++ VLV G TVVLGG+ ++ K P LGDIP +G LFR + R Sbjct: 607 -GPAIDTRRVKTKVLVSDGGTVVLGGIFEEDDNVLNDKTPFLGDIPGLGVLFRGKNESRR 665 Query: 582 KRNLMVFIRPTIIRDD 597 + L++F+ P ++ Sbjct: 666 RAELLIFLTPVVLTSQ 681 Score = 78.9 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 21/177 (11%), Positives = 60/177 (33%), Gaps = 7/177 (3%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 +F +ADIR +++ +++ SVQG ++V + Sbjct: 280 SVVARYTGRPITLDFKDADIRTVMQVFADFTKMNLVLSDSVQGKVTVFL-KDVPWDQALD 338 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPA 137 ++ G N L + ++ + + LV+++ + Sbjct: 339 I---VMRSKGLVSSQAGNVLLVSTPTDVTNDQFQTANRRAQDEM-EPLVSKVFQVSYQKT 394 Query: 138 RDLAPLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 DL L++ + G ++ E ++ + + + + ++ ++ +D + Sbjct: 395 ADLVALIKSEDSKLLSARGTLISDERTSQIFVQDTPTRLERISMIVNGLDKPVKQVM 451 >UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Reinekea blandensis MED297 RepID=A4BAN5_9GAMM Length = 709 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 110/421 (26%), Positives = 189/421 (44%), Gaps = 32/421 (7%) Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRIT 252 I +++ ++ + ++ + +L + ++T ++++ P E A Q Sbjct: 299 IGFNLVASDSISGTITLRLNNVPWDQALELVLKTNGLDKRQTGNVLLVAPAAELAEQERL 358 Query: 253 SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE------KLKDEKGNARKPSSSG 306 L E+ T + YA+A ++ +L S + DE G SSG Sbjct: 359 ELEAREQAEKLAPLRTEYVQVNYARAADIASILRSSSSAAAAAANVGDESGGVNSLPSSG 418 Query: 307 AM--DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN 364 +++ DE+TN+L+IT + + + I+ D+ QVL+EA IV + G Sbjct: 419 GFLSSRGSVSVDERTNTLIITDTSVNLDGIRSAISFFDVPVEQVLIEARIVSARTSVGDQ 478 Query: 365 LGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP-AWDMFSAYNGMAAGFF 423 LGV+W +Q TG +A+ Y + P A+ + G A+ F Sbjct: 479 LGVRWGGAIFPSQNVFATGTVESSASIESDIYGGSPNPDLTFPDAFAVNLPATGNASSFA 538 Query: 424 NG-------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 G D + ++AL S + ++++ P IVT D + AS GQ+V + T Sbjct: 539 VGLIADNLLDLDLEISALESLGEAEVVSQPKIVTSDGQAASIFSGQNVAFPAEDGGT--- 595 Query: 477 NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVL 536 + G L VTPQV D V+L + +V+ S + G +T T+ VL Sbjct: 596 ------QFIEAGLNLNVTPQVTPDDKVILTL-----TVNQDSLAAGGGAIDTNTVSTQVL 644 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 V+ G T+VLGG+ + V K P+LGD+P+VG LF+ T+T + L++FI P +I++ Sbjct: 645 VENGVTLVLGGVYRTEKTQLVEKAPILGDLPVVGNLFKRTTTSDERSELLIFITPKLIQN 704 Query: 597 D 597 Sbjct: 705 G 705 Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 28/187 (14%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ NF + ++R ++I+ ++G ++ S+ GTI++R N+ + + +L Sbjct: 276 GEKLSLNFQDIEVRDVLQIIANYIGFNLVASDSISGTITLRLNN-VPWDQALEL---VLK 331 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G N L + + + + L T V + A D+A +L Sbjct: 332 TNGLDKRQTGNVLLVAPAAELAEQERLELEAREQAEKLAPLRTEYVQVNYARAADIASIL 391 Query: 145 R--------------------QMMDAG----SVGNVVHYEPSNVLILTGRASTINKLIEV 180 R + +G S G+V E +N LI+T + ++ + Sbjct: 392 RSSSSAAAAAANVGDESGGVNSLPSSGGFLSSRGSVSVDERTNTLIITDTSVNLDGIRSA 451 Query: 181 IKRVDVI 187 I DV Sbjct: 452 ISFFDVP 458 >UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD Length = 901 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 93/417 (22%), Positives = 164/417 (39%), Gaps = 39/417 (9%) Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL--LKSLD 259 A+D++ + + + +L K + + ++I P K + L + Sbjct: 509 ADDVSGKVTIRLRNVPWDQALDLVLRTKALGKEEFGNIIRIAPLKTLEEEARLRQERKKS 568 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 +++ E+ + + YA A ++ + V + ++T D++T Sbjct: 569 LQQQEDLMVNLLPVNYAVAADMAARVKDVLS------------------ERGSVTVDQRT 610 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 N L++ +S E+ +++ LD + QVL+E+ IVE +LGVQW + Q Sbjct: 611 NVLIVKDVRSNTERARSLVRSLDTQTPQVLIESRIVEANTSFSRSLGVQWGGQARAGQAT 670 Query: 380 TNTGLPIFNAAQGVADY----------KKNGGITSANPAWDMFSAYNGMAAGFFNG--DW 427 N+ IF V N + G G G Sbjct: 671 GNSTGLIFPNNLAVTGGVTGTGAGLPDNPNFAVNLPTGTGQGVGGAMGFTFGSAGGALQL 730 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTV 487 + L+A + ++ P + TLDN A N G +P S Sbjct: 731 NLRLSAAENEGSVKTISAPKVTTLDNNTARINQGVSIPFSQTSAQGVNTT------FVEA 784 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVLVKTGETVVLG 546 L+VTP + + +VL+ I + D SS G P+ + VLVK G+T V+G Sbjct: 785 RLSLEVTPHITQDGSVLMSINASNNQPDPSSTGANGQPSIQRKEANTQVLVKDGDTTVIG 844 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 G+ QV+ VP L IP++G LF+ S ++ L++FI P I+ + ++L Sbjct: 845 GIYVRRGATQVNSVPFLSRIPVLGLLFKNNSETDTRQELLIFITPRILNRQTIAQTL 901 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 69/175 (39%), Gaps = 8/175 (4%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 AA P ++ F + DI+ + ++ + K I++ V G +++R Sbjct: 467 AAEGAPQQARYRGKRVSFEFKDIDIQNLLRVIAEISKKNIVVADDVSGKVTIRL-RNVPW 525 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP-GVGDELVTRIVP 131 + +L N +++ ++ + + + ++L+ ++P Sbjct: 526 DQALDL---VLRTKALGKEEFGN-IIRIAPLKTLEEEARLRQERKKSLQQQEDLMVNLLP 581 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 + A D+A ++ ++ G+V + +NVLI+ S + +++ +D Sbjct: 582 VNYAVAADMAARVKDVLS--ERGSVTVDQRTNVLIVKDVRSNTERARSLVRSLDT 634 >UniRef50_A0LPH6 General secretion pathway protein D n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPH6_SYNFM Length = 793 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 123/520 (23%), Positives = 213/520 (40%), Gaps = 46/520 (8%) Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDA----------GSVGNVVHYEPSNVLILTGRAST 173 E+ +V L+++ +D + +M ++ + VL+L Sbjct: 277 EVSMEVVQLQSIAPQDAVQGMDALMGKLGLFKETNLKNNLAFIPLVNFRGVLVLAQTPEL 336 Query: 174 INKLIEVIKRVDVIGTE---KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKI 230 + + I +D G E + + +++ A+D+ +IL Q+ + + P + Sbjct: 337 LKTARQWINALDTHGGEVGEQIYVYYVQNGLAKDIGDILLQVYGIA-APERRPEKQVVQS 395 Query: 231 VADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYL-----KYAKATNLVEVL 285 +RT S + S S + +Y + Sbjct: 396 TTGRRTFGSGSSFGGGSTSSGFGTSSSGSSFGSSSSSRFRSASSDSSGQYGGTGSAFGQT 455 Query: 286 TGVSEKLKDEKGNAR-----KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIAR 340 TG + +A + + V I DE N++V+ A+ + K+ I Sbjct: 456 TGSGASAQRAARSAAGRAGGQSPPTSVSPEVMIIPDEVNNAIVVRANATDYAKIKKTIEA 515 Query: 341 LDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNG 400 LDI VL+E II EV G++W + A G G Sbjct: 516 LDILPRAVLIEVIIAEVALTKDFEYGLKWYFSHA-----------EVGAGVGQGSLNGLG 564 Query: 401 GITSANPAWDMFSAYNGMAAGFFNG--DWGVLLTALASNNKNDILATPSIVTLDNKLASF 458 G++ S+ GMA + + D +L+ L+S K IL+TP+++ DNK A+ Sbjct: 565 GVSDIALNLAGISSAGGMALAWVSNAKDMAGVLSWLSSKTKVKILSTPTLLATDNKEAAI 624 Query: 459 NVGQDVPVLSGSQT----TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV 514 VG PV SGS T T+ D VF+T+E + GT L VTP +N G V LE+EQ + V Sbjct: 625 QVGGRTPVPSGSYTGGTSTTLDTVFSTIEYEETGTILTVTPHINAGGLVRLEVEQTIRRV 684 Query: 515 DSSSNS---TLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 +++ PTF R ++ +L + G TVV+GG++D+ ++ + P+L D+P++G Sbjct: 685 GANATVGVNNTAPTFTERNLKTTLLAQDGSTVVIGGIIDEIDRDTTTGAPMLVDVPIIGP 744 Query: 572 LFRYTSTERAKRNLMVFIRPTII--RDDDVYRSLSKEKYT 609 LF R + L++ I P ++ R D R + Sbjct: 745 LFGQKGKSRERTELLIAITPRVVERRGSDSLREFVGKMRD 784 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 114/287 (39%), Gaps = 11/287 (3%) Query: 18 PCAGHAENEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 G E ++ NF+ AD+ + ++ G +L ++DP++QG IS+ F++ E Sbjct: 103 VPVGEGERQKVVFNFDKADLGEVTSQVFGDYLKLNYVLDPTLQGRISMYLEGEFNRTELL 162 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV---GDELVTRIVPLE 133 Q + + S+ G + +S +AD+ G V I L Sbjct: 163 QMIIKAFEANNVSITPQK-GLYYIQPLQRSASSSLSLADTITLKPDKDGVRPVIVIYKLR 221 Query: 134 NVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV--IGTEK 191 + + ++ + G ++ SN LI + + ++EV++ +D+ + Sbjct: 222 YLDVKQALNTVKSFITPGRP--LISDTMSNSLIFVESSDNAHSIVEVLRTMDMNILQEVS 279 Query: 192 QQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG-PEKARQR 250 +++ L+ + +D + ++ L+ + + + + +++ + + Sbjct: 280 MEVVQLQSIAPQDAVQGMDALMGKLGLFKETNLKNNLAFIPLVNFRGVLVLAQTPELLKT 339 Query: 251 ITSLLKSLDVEESEEG-NTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 + +LD E G VYY++ A ++ ++L V E+ Sbjct: 340 ARQWINALDTHGGEVGEQIYVYYVQNGLAKDIGDILLQVYGIAAPER 386 >UniRef50_C6BWY6 Type II and III secretion system protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWY6_DESAD Length = 534 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 101/425 (23%), Positives = 189/425 (44%), Gaps = 40/425 (9%) Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 ++I L+Y A D+ Q++S I + K N ++ + Sbjct: 133 QMVTEVIMLKYLKAADVIADFRQILSPEG-----------SIFSGKSNNYIVFTDTAANV 181 Query: 249 QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM 308 +I L+ +D+ S ++ Y L+Y +A + +LT + + + + Sbjct: 182 NKIKELISHIDMPGSLP-VSKTYSLQYIEAKTVAPMLTKLYTEKVGKVTQST-------- 232 Query: 309 DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ 368 V I + ++TNSL++ A +SV + + ++I++LD+R QV ++A +VEV + LG + Sbjct: 233 --VQILSMDETNSLIVLAPESVHDDITSIISKLDVRTMQVSIKAYLVEVTLTDETKLGFE 290 Query: 369 WANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-W 427 W L + +P +A + N D + Sbjct: 291 WMFSTNADGTDLKGALDFGHI---------------FDPTGIANTAQEALKFSIINSDNF 335 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL--SGSQTTSGDNVFNTVERK 485 +++ AS++ + +++ P IV LDN+ AS VG ++P+L + + TS NV T + + Sbjct: 336 KMMMNFFASDDSSRVVSAPHIVALDNQKASIAVGTEIPILKLTQTSVTSQQNVIKTYDHR 395 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 G +L +TP + E V L+I+Q +SS+ + R VLVK +T+V+ Sbjct: 396 KFGMQLNITPTIAENRDVTLKIDQTLSSLLADDTDPDKWQSTDRAASTTVLVKDAQTLVI 455 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL+ S P L ++P++G LF K L++F+ P +I D ++S Sbjct: 456 GGLMTVNSALDKKGAPYLRNMPVLGPLFGSQDDSMTKSELLLFLTPYVIATPDEADAMSG 515 Query: 606 EKYTR 610 + + Sbjct: 516 LRKAQ 520 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 133/262 (50%), Gaps = 12/262 (4%) Query: 7 ITCCLLAALLMPCAGHAENEQ---YGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 + C L+ + A + NF DI +E +GKT + +P ++G ++ Sbjct: 16 MLCSLVGTGVGAGVAQAAPKGKNLIEINFRQTDIMAVLEFYSHLMGKTFIPNPELKGPVT 75 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 V S ++ E + S+LD+ GY+++ G+ K+V S ++ G+ DS G GD Sbjct: 76 VISPKPVTRFEALRLLYSVLDMKGYTLVQQS-GYYKIV-SKSMAVHEGLNVDSITVG-GD 132 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 ++VT ++ L+ + A D+ RQ++ G++ + +N ++ T A+ +NK+ E+I Sbjct: 133 QMVTEVIMLKYLKAADVIADFRQILSP--EGSIFSGKSNNYIVFTDTAANVNKIKELISH 190 Query: 184 VDVIGTEKQ-QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 +D+ G+ + L+Y A+ +A +L +L +E GK + +I++ TNSLI+ Sbjct: 191 IDMPGSLPVSKTYSLQYIEAKTVAPMLTKLYTEKVGKVTQSTV---QILSMDETNSLIVL 247 Query: 243 GPEKARQRITSLLKSLDVEESE 264 PE ITS++ LDV + Sbjct: 248 APESVHDDITSIISKLDVRTMQ 269 >UniRef50_Q0EXA5 Probable pilQ; fimbrial type-4 assembly signal peptide protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXA5_9PROT Length = 793 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 107/476 (22%), Positives = 189/476 (39%), Gaps = 47/476 (9%) Query: 138 RDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHL 197 + + N + N L L S N +I DV G ++I + Sbjct: 345 DEAVKSEKVYTGQKVTFNYKDIDIRNALKLIAEMSDFN----IIMSDDVKGVLTMRLIDV 400 Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS 257 + A DL L + GK Q ++ +A ++ AR+ + Sbjct: 401 PWDQALDLI-----LSARGLGKEQNGNVVRIAPLA-------VLKADANARKEAKQSV-- 446 Query: 258 LDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL----------------KDEKGNARK 301 E+ T L YA ++ +L G S K + + Sbjct: 447 ---EDVAPLETEFITLGYASVNDVKTILEGGSVKTEVTSAGGAAGGTTGANGTGQTVSSS 503 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 + I DE++N+++IT + + +IA +D QV+VEA IVE D Sbjct: 504 SELKLLSERGVIMLDERSNTMIITDTRERLNNIKRLIAVIDKPMQQVMVEARIVEATDTF 563 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 +LGV+W G +N G + + + +A A + + Sbjct: 564 SRDLGVKW-----GGTLNSNGGGYTHTVTGAASAPQNVVDLGAAVKAGAGGAIGYTLGTL 618 Query: 422 FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT 481 + + L+A + + ++++P + T + + A Q +P TT+ + Sbjct: 619 NNALNLNLELSAAEAEGQIKVVSSPRVFTSNLQEALIEQDQQIPFQV---TTASTPPVVS 675 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGE 541 + K+ LKVTPQ+ +++++ V+ +N+ PT + + I +LVK GE Sbjct: 676 YQLKSAKLTLKVTPQITADKRIIMQLV--VNKDTPVANTVGPPTIDKKQIMTKLLVKNGE 733 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 T+VLGG+ + +QV+ VP L +IP +G F+ R + L++FI PTII DD Sbjct: 734 TMVLGGIYTQTTSDQVNGVPGLQNIPFIGNFFKRKQKVRNRNELLIFITPTIIADD 789 Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 66/201 (32%), Gaps = 38/201 (18%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ N+ + DIR ++++ + I++ V+G +++R D + LS Sbjct: 356 GQKVTFNYKDIDIRNALKLIAEMSDFNIIMSDDVKGVLTMRLID-VPWDQALDLILSA-R 413 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP-GVGDELVTRIVPLENVPARDLAPL 143 G + +++ A +K ++ + L T + L D+ + Sbjct: 414 GLGK---EQNGNVVRIAPLAVLKADANARKEAKQSVEDVAPLETEFITLGYASVNDVKTI 470 Query: 144 LR--------------------------------QMMDAGSVGNVVHYEPSNVLILTGRA 171 L ++ G ++ E SN +I+T Sbjct: 471 LEGGSVKTEVTSAGGAAGGTTGANGTGQTVSSSSELKLLSERGVIMLDERSNTMIITDTR 530 Query: 172 STINKLIEVIKRVDVIGTEKQ 192 +N + +I +D + Sbjct: 531 ERLNNIKRLIAVIDKPMQQVM 551 >UniRef50_A0P0N8 General secretion proteinD n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0N8_9RHOB Length = 789 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 134/680 (19%), Positives = 257/680 (37%), Gaps = 124/680 (18%) Query: 25 NEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS-- 81 NE F+N + V+ + G L + G +S ++ + Sbjct: 120 NEAVTIAFDNEPLGYVVKQLLGGMLSANYVTSEEFTGVVSFKTETPVPRSSIPSILRDIL 179 Query: 82 ----------------------------------------ILDLYGYSVITLDNGFLKVV 101 +L L +V + +++ Sbjct: 180 AHYGYVMKIINGVYHIGPVSKIVELERNAAAGAIGDFKTRVLKLKNGNVEEIAQAVAQIL 239 Query: 102 RSANVKT------------------SPGMIADSSRPGVGDELVTRIVPLENVPARDLA-P 142 + T + + + G+ ++PL P +A Sbjct: 240 PAGATITPVLSNNTLVLRVNPSDEKAVVDLIQAIIGNSGENEFIAVIPLRESPPEVVANA 299 Query: 143 LLRQMMDAGSVGN-----VVHYEPSNVLILTGRASTINKLIEVIKRVDV--IGTEKQQII 195 ++ ++G G + E ++L++ ++ + +++ +D +II Sbjct: 300 VVGYFQNSGKTGTQIPLVIPMEEQQSLLVVAQSQQAMSNMRTLVRGLDKENQNATSLRII 359 Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIV----------ADKRTNSLIISGPE 245 L+ SAE+ A LN + + S+ + A+ + + N+ IS P Sbjct: 360 PLKNLSAEETAGQLNAIFANSNDGPGYEPDIRAQDLLTASIPDDGHGPEAENASSISAPA 419 Query: 246 KARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS 305 R K D ++ G +++ + N + Sbjct: 420 IIRG------KGRDDPDNGSGT----------------AAQRAAKQRLSGRLNRLADTRR 457 Query: 306 GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 + + V+I D + N+L++ + +++ V+ LD+ AQV++EA IVEV + L Sbjct: 458 SSEEAVSIVPDVRNNALLVHSKFRQFKRIRDVVRTLDVPLAQVVIEATIVEVALNDRLKY 517 Query: 366 GVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 GVQ G + ++ AD + G + + + +G A F Sbjct: 518 GVQAFLSGEGVEIRSS-------RLPDPADTGEPGAVALFD-----VDSVDGTTATF--- 562 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS---GDNVFNTV 482 +L AL + + ++++P + LD K A +VG +P L S N + Sbjct: 563 ----VLEALQTVTELKVISSPYLTVLDGKAARLSVGDQIPFLVQQTNASETGTTTTTNQI 618 Query: 483 ERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS-TLGPTFNTRTIQNAVLVKTGE 541 E + VG L+VTP + ++VLL ++QEVSS SS + L P + RTI + V++++G+ Sbjct: 619 EVRDVGVILQVTPSIRPDNSVLLNVQQEVSSAKSSGSGENLTPVISQRTINSDVVIESGK 678 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 +LGGL+ S+E +KVPL+ +P+VG LF+ T + + L+V I P ++R Sbjct: 679 MALLGGLIQSRSEEVTTKVPLMSKMPIVGNLFKQTDAVKDRTELLVMITPRVVRRSHQLD 738 Query: 602 SLSKEKYTRYRQEQQQRIDG 621 L++ +R DG Sbjct: 739 ELTRLLRSRSTGLHTSFSDG 758 >UniRef50_A8ZSX5 Type IV pilus secretin PilQ n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSX5_DESOH Length = 987 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 107/520 (20%), Positives = 190/520 (36%), Gaps = 70/520 (13%) Query: 100 VVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHY 159 V A +P ++ P + P +A + Sbjct: 512 VTEPAPASEAPVTPPETDVPAPIGTV---------AAPEAAVPQTAPAFEAPTGMRTEPD 562 Query: 160 EPSNVL------------ILTGRASTINKLIEVIKRV---------DVIGTEKQQII-HL 197 P+ L L + I +I ++K V DV G+ + + Sbjct: 563 APAPSLFGKKKNFTGEPIALDFYKTDIRNVIRILKDVSGKNFAIDDDVSGSVTLSFVNPV 622 Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS 257 + DL +N L ++ A + T + ++ E + +T+ Sbjct: 623 PWDQVLDLILEMNNL-----------GMVEADGIIRIATQATLVQQKESEKAALTAQQDM 671 Query: 258 LDVEES-EEGNTRVYYLKYAKA-TNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITA 315 EE+ T + + YA A +++ + G+ K Sbjct: 672 KKAEETLASLVTEYFSISYANAGEDILPHIEGLLSDRGHAK------------------V 713 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 D +TN +++T + EK +IA++D QV+++A IVE G +W N Sbjct: 714 DNRTNQVIMTDVEEKVEKAREIIAKIDKVTPQVMIKARIVETSSSFSREFGTEWGIDNRY 773 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 N G + Y + + S + N L+ + Sbjct: 774 NSPNINIGTDGAYRDEMGGTYTYDVALNSLSSPVQNLIGINFARIIGTPFSLDAKLSLME 833 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTP 495 S I++TP +VTLDNK A+ + G D P T ++ V+ KT+ L VTP Sbjct: 834 STGDVKIISTPKVVTLDNKTATISQGIDYPY------TVVEDGEADVKWKTIDLNLDVTP 887 Query: 496 QVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 V D + +++ + + V N +FNT+ +LV G+TVV+GG++ + Sbjct: 888 HVTPDDRISMKLNIQKNDVGEIINGEQ--SFNTKRASTELLVNDGDTVVIGGIIKEREGA 945 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 VP + IP++G LF+Y + K L++FI P ++R Sbjct: 946 GERGVPWISKIPVLGNLFKYKTRSDEKSELLIFITPNVVR 985 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 63/177 (35%), Gaps = 15/177 (8%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E +F DIR + I+ GK ID V G++++ + + IL+ Sbjct: 577 GEPIALDFYKTDIRNVIRILKDVSGKNFAIDDDVSGSVTLSFVNPVPWDQVLDL---ILE 633 Query: 85 LYGYSVITLDNGFLKVV--------RSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 + ++ D G +++ + + LVT + Sbjct: 634 MNNLGMVEAD-GIIRIATQATLVQQKESEKAALTAQQDMKKAEETLASLVTEYFSISYAN 692 Query: 137 A-RDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 A D+ P + ++ G+ +N +I+T + K E+I ++D + + Sbjct: 693 AGEDILPHIEGLLSD--RGHAKVDNRTNQVIMTDVEEKVEKAREIIAKIDKVTPQVM 747 >UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A4Y8_ALHEH Length = 694 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 88/380 (23%), Positives = 165/380 (43%), Gaps = 25/380 (6%) Query: 225 LLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV--EESEEGNTRVYYLKYAKATNLV 282 +L A+ + + +++ P + + +E ++ + YA+A ++ Sbjct: 335 ILEAQGLDVRERGNVLTFAPTEELAARDRAREEARRTVDEVAPLSSAFIQVNYARAEDIA 394 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 +L G L E+G + DE+TN L++ + + + ++ RLD Sbjct: 395 NLLKGDETSLLSERGQ--------------VAIDERTNLLIVQDMERNIDDIRNLVNRLD 440 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGI 402 I QVL+E+ IV D +LGV++ G+ + G I + Sbjct: 441 IPVQQVLIESRIVIADDDFSRDLGVRFGYTATGS--LGSEGTAIGARPTPTPGIDGTDDL 498 Query: 403 TSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 PA + + L+A+ + + +++++P ++T + + A+ G Sbjct: 499 MVDLPAPAEAPRLGLAIGRIGDRLLQLELSAMETEGRGEVISSPRVITANQREANIRQGV 558 Query: 463 DVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL 522 ++P + + + + VE K L VTPQ+ D V++ + EVS+ Sbjct: 559 EIPYQEETASGATN-----VEFKEAVLGLTVTPQITPDDRVIMNL--EVSNDTVGEVFAG 611 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 P+ +T+++ VLV GETVVLGG+ + S EQ +VP G +P VG LFR T + Sbjct: 612 VPSIDTQSVTTQVLVDNGETVVLGGVYERASGEQTRRVPFFGSLPGVGWLFRNRLTFDEQ 671 Query: 583 RNLMVFIRPTIIRDDDVYRS 602 L+VF+ P I+ + R+ Sbjct: 672 SELLVFVTPRILDESLNARN 691 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 6/165 (3%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 + +F + ++R+ ++I+ +I SV G +++R + + IL+ Sbjct: 282 GDPITLDFQDVEVRRVLQILADFNDMNAVISDSVDGRLTLRLVE-VPWDHALEI---ILE 337 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G V N L + + + A D+A LL Sbjct: 338 AQGLDVRERGNVLTFAPTEELAARDRAREEARRTVDEVAPLSSAFIQVNYARAEDIANLL 397 Query: 145 RQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 + + G V E +N+LI+ I+ + ++ R+D+ Sbjct: 398 KGDETSLLSERGQVAIDERTNLLIVQDMERNIDDIRNLVNRLDIP 442 >UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Tax=Idiomarina RepID=Q5QV49_IDILO Length = 427 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 85/361 (23%), Positives = 157/361 (43%), Gaps = 38/361 (10%) Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYY-----LKYAKATNLVEVLTGVSEKLKDE 295 + R+ + +DV ++ Y+ + +AKA++L ++L + Sbjct: 95 LIASHDLAIRLQGSMLRIDVAGEHTTDSNEYHSILLSVNFAKASDLAKLLKNEQQSFLSP 154 Query: 296 KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 G A++ D +TN+L++ + ++ LD+ QVL+EA +V Sbjct: 155 NG--------------AVSVDARTNTLILRDTPEQLATIRQLVNDLDVPVKQVLIEARMV 200 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 V+ LG++W G + G + + G ++ Sbjct: 201 TVKANVSKELGIRWGVSEYGLAIPEDAGSFVKGMQVDLPTAAPAGTFSA----------- 249 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG 475 +A + + LTAL NK +I+ +P I T + + A G ++P + + + Sbjct: 250 -NLARLSDDILLDLELTALEQENKAEIITSPKIFTSNQQPAYIEQGTEIPYVETAAHGA- 307 Query: 476 DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT--FNTRTIQN 533 V+ K L VTPQ+ + VL+E+ ++ + + GP +T+ + Sbjct: 308 ----TAVQFKKAVMGLSVTPQITPNNHVLMELTITQNTRGDTVATPTGPAVAIDTQEMST 363 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 VL K GET+VLGG+ + + S+VP+LG +PL+G+LF + KR LM+F+ PTI Sbjct: 364 RVLAKNGETIVLGGIFQEHNLNDDSRVPILGSLPLIGKLFSHQQQRDEKRELMIFVTPTI 423 Query: 594 I 594 + Sbjct: 424 L 424 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 60/166 (36%), Gaps = 23/166 (13%) Query: 26 EQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDL 85 + N +R ++++ IL+ +V+G S++ N Q F +++ Sbjct: 43 QPVSLNTRKMPLRDLIQLLADQHQLNILMTDNVKGESSLKLNGVAWQD----AFATLIAS 98 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 + + I L L++ +E + ++ + A DLA LL+ Sbjct: 99 HDLA-IRLQGSMLRI------------DVAGEHTTDSNEYHSILLSVNFAKASDLAKLLK 145 Query: 146 ----QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 + G V +N LIL + + +++ +DV Sbjct: 146 NEQQSFLSPN--GAVSVDARTNTLILRDTPEQLATIRQLVNDLDVP 189 Score = 41.9 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 69/197 (35%), Gaps = 32/197 (16%) Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG------VGDELVTRIVP 131 L+IL S + + + + S + P + P + D+ I+ Sbjct: 12 LLLAILSFQPVSAVYAADKNWQSLLSEQQRLQPVSLNTRKMPLRDLIQLLADQHQLNILM 71 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 +NV + + V + LI + + +L + R+DV G Sbjct: 72 TDNVKGE----------SSLKLNGVAWQDAFATLIASHDLAI--RLQGSMLRIDVAGEHT 119 Query: 192 QQ-------IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 ++ + +A A DLA++L + Q + + D RTN+LI+ Sbjct: 120 TDSNEYHSILLSVNFAKASDLAKLLKN-------EQQSFLSPNGAVSVDARTNTLILRDT 172 Query: 245 EKARQRITSLLKSLDVE 261 + I L+ LDV Sbjct: 173 PEQLATIRQLVNDLDVP 189 >UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lovleyi SZ RepID=B3E9T4_GEOLS Length = 891 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 100/441 (22%), Positives = 181/441 (41%), Gaps = 36/441 (8%) Query: 171 ASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKI 230 I K+ E V + + LE+A AE + QL+SE K+ + Sbjct: 472 GDQIEKVAEQAAPVSGKARYNGRKVTLEFADAE--VRKIFQLLSEVSNKNF--------V 521 Query: 231 VADKRTNSLIISGPEKARQRITSLL-KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 + D+ T ++ + + ++ + +++ EEG + K + L E + Sbjct: 522 LGDEVTGTISLKLVNVPWDQALDIILDTKGLDKREEGTIVLIRGKGKFKSLLDEEMEIRK 581 Query: 290 EKLKDEK-------------GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLAT 336 LK E + +S D IT D++TN +++ +S + + Sbjct: 582 STLKSEPLQTAMFDVNYADLASIVSQFNSIKTDRGLITQDQRTNKVIVKDVKSAVDDMRK 641 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADY 396 ++A LD+ QV++EA IVE +LGV W + G+A Sbjct: 642 ILASLDVPEKQVMIEARIVEASSTFTQSLGVNWGIHYRDGSASIAGINSMDTNFGGLAST 701 Query: 397 KKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLA 456 S +P ++ +++ N + L A S I++TP + TL++K A Sbjct: 702 APTSSGVSGSPGAAAGISFGTLSS---NIKLDLRLNAAVSAGLVRIVSTPRVATLNHKSA 758 Query: 457 SFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS 516 GQ +P T+ + + L+VTP +N V+++I+ + S S Sbjct: 759 KITQGQQIPY------TASTSDKIETKFVEAALALEVTPHINPNGTVVMKIDAKNDSPGS 812 Query: 517 SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYT 576 + N P N + ++++ GET V+GG+ + VP L D+P +G LF+ Sbjct: 813 TGNP---PAINKKQATTEMMLRDGETTVIGGIFVESESNNDDGVPFLADVPWLGGLFKSN 869 Query: 577 STERAKRNLMVFIRPTIIRDD 597 T+R + L++FI P II + Sbjct: 870 ETKRNRNELLIFITPRIINSN 890 Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 70/224 (31%), Gaps = 11/224 (4%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQ 73 A + + F +A++R+ +++ + K ++ V GTIS++ + Sbjct: 482 AAPVSGKARYNGRKVTLEFADAEVRKIFQLLSEVSNKNFVLGDEVTGTISLKLVN-VPWD 540 Query: 74 EYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLE 133 + ILD G L + + + L T + + Sbjct: 541 QALDI---ILDTKGLDKREEGTIVLIRGKGKFKSLLDEEMEIRKSTLKSEPLQTAMFDVN 597 Query: 134 NVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ 193 + + G + + +N +I+ S ++ + +++ +DV + Sbjct: 598 YADLASIVSQFNSI--KTDRGLITQDQRTNKVIVKDVKSAVDDMRKILASLDVPEKQVMI 655 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTN 237 A + + Q + + G S + TN Sbjct: 656 -----EARIVEASSTFTQSLGVNWGIHYRDGSASIAGINSMDTN 694 >UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLX9_9GAMM Length = 702 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 90/417 (21%), Positives = 184/417 (44%), Gaps = 34/417 (8%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQR 250 ++ L ++ + + + + +L K + + ++++ P E A + Sbjct: 312 EVAELNLVVSDTVGGNITLRLKNVPWDQALDIILKTKGLDQRTVGNVLLIAPAAEIAERE 371 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 L S VE+ T + Y KA+ ++ + + + Sbjct: 372 RQELESSKQVEQLAPLRTEFIQVDYRKASEMMSTIQ----------------EAKMVSER 415 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 + AD++TN L++ + + ++ + D+ QVLVEA +V +LGV+W Sbjct: 416 GFVMADDETNVLMVRETATALRDIRNILKKFDVEVEQVLVEARLVNATSNVTKDLGVKWG 475 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG---MAAGFFNGDW 427 G N I + + G ++ ++N D+ ++ +A GF G Sbjct: 476 ---FGYNDVDNGKGWIVDNSIGNVNFGNTTAGNTSNLMVDLGASVTSPGTIAIGFKPGAS 532 Query: 428 GVLLTALA---SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVER 484 +L L+ ++ K +I++ P ++T + K A G ++P + ++ ++E Sbjct: 533 SLLALELSALETDGKAEIVSQPKVLTTNGKQAKIESGSEIPYQTV------EDGEVSIEF 586 Query: 485 KTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVV 544 K V L VTP++N GD + +++ S+ + + + +Q V+V G+T+V Sbjct: 587 KDVVLSLDVTPRINPGDRIAMDLLITQDSIGQVLPNGEI-SIDNNELQTTVVVPDGQTIV 645 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 LGG+ + + E ++KVPLLGD+P++G LFR + K L++FI P ++R+ + Sbjct: 646 LGGVFKNETSETINKVPLLGDLPIMGPLFRNKENQAEKTELLIFITPKLVRNSLTAQ 702 Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 70/176 (39%), Gaps = 4/176 (2%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ NF N ++R ++I+ + +++ +V G I++R + IL Sbjct: 291 GEKIDLNFQNVELRSVLQIIAEVAELNLVVSDTVGGNITLRL-KNVPWDQALDI---ILK 346 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G T+ N L + + + S + L T + ++ A ++ + Sbjct: 347 TKGLDQRTVGNVLLIAPAAEIAERERQELESSKQVEQLAPLRTEFIQVDYRKASEMMSTI 406 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYA 200 ++ G V+ + +NVL++ A+ + + ++K+ DV + L A Sbjct: 407 QEAKMVSERGFVMADDETNVLMVRETATALRDIRNILKKFDVEVEQVLVEARLVNA 462 >UniRef50_Q1Q8Q7 Type II and III secretion system protein n=5 Tax=Moraxellaceae RepID=Q1Q8Q7_PSYCK Length = 792 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 99/447 (22%), Positives = 182/447 (40%), Gaps = 54/447 (12%) Query: 178 IEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTN 237 + ++ V G ++I++ + A D+ L +K + + Sbjct: 368 MNIVASDSVAGNITLRLINVPWDQALDII-------------------LKSKNLGKRENG 408 Query: 238 SLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE 295 ++I+ P E A Q L VE T L YAKA +++ +++ S Sbjct: 409 NVILVAPSTELAEQEARELEAQQAVESYAPLRTEYIRLSYAKAADVLTLISQGSGGASGG 468 Query: 296 -----KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 K S+S + +T DE+TN+L++ + E + +I ++DI QV++ Sbjct: 469 SNTGSANANTKDSNSLLSNRGTVTVDERTNTLIVKDVAASIENIHKLIGKIDIPVRQVMI 528 Query: 351 EAIIVEVQDGNGLNLGVQWANKNVGAQQ-----FTNTGLPIFNAAQGVADYKKNGGITSA 405 EA IV D +GV+W + GA + +++ G T + Sbjct: 529 EARIVSATDSFSKEIGVRWGILSNGAANNRNLLVGGSNQTLWDLKDFDVQTTTINGQTVS 588 Query: 406 NPAWDMFSAYNGMA---------------AGFFNGDWGVLLTALASNNKNDILATPSIVT 450 P +D+ N G + + L+A+ ++N+ ++++TP I+T Sbjct: 589 YPKYDITRPDNLNVDLGVDNPAGRIAFGLLGISDFMLDLELSAMQADNRGEVISTPKILT 648 Query: 451 LDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE 510 D + A + G +P S + + T K L+ TP + + L++ Sbjct: 649 SDKQTAKVSSGTQIPYQEASASGA-----TTTSFKEAALSLEATPNITPDGKIGLQLLIT 703 Query: 511 VSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 + +N +I V+V+ G+T+VLGG+ + + V KVP LGD+P +G Sbjct: 704 NGTPTIINNQV---AIAEDSISTNVIVEDGQTIVLGGVFKNRTNNGVDKVPFLGDLPYIG 760 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDD 597 + FR K L++FI P +I D Sbjct: 761 RAFRKDVRSNTKEELLIFITPKLINDG 787 Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 27/201 (13%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 F + +IR ++I+ Q I+ SV G I++R + + IL Sbjct: 343 GAALSMEFQDVEIRSVLDILAQFTEMNIVASDSVAGNITLRLIN-VPWDQALDI---ILK 398 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 N L + + + L T + L A D+ L+ Sbjct: 399 SKNLGKRENGNVILVAPSTELAEQEARELEAQQAVESYAPLRTEYIRLSYAKAADVLTLI 458 Query: 145 RQMMDA---------------------GSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 Q + G V E +N LI+ A++I + ++I + Sbjct: 459 SQGSGGASGGSNTGSANANTKDSNSLLSNRGTVTVDERTNTLIVKDVAASIENIHKLIGK 518 Query: 184 VDVIGTEKQQIIHLEYASAED 204 +D+ +Q +I SA D Sbjct: 519 IDIP--VRQVMIEARIVSATD 537 >UniRef50_A3ERG1 Putative general secretion pathway protein D n=2 Tax=Leptospirillum sp. Group II RepID=A3ERG1_9BACT Length = 555 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 95/385 (24%), Positives = 174/385 (45%), Gaps = 27/385 (7%) Query: 259 DVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQ 318 + + +Y L+ A ++ + + + K + G V I D Sbjct: 137 QNQAPMDRELFLYNLENTSAKSVAKTVNSILSKGFTPQP-VGSIRQGGLEAPVQIVPDIP 195 Query: 319 TNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN-----LGVQWANKN 373 +NSL+++A + + ++ LD + +V V+A ++E+ N LG N Sbjct: 196 SNSLLVSATMNDYSIIKGLLRSLDRQPGEVYVKASLIEISTDKLNNIQVNLLGAVATGSN 255 Query: 374 ----VGAQQFTNTGLPIFNAAQGVADYKKNGG--ITSANPAWDMFSAYNGMAAGFFNG-- 425 +G + G + A A G T A A + G+ AG G Sbjct: 256 GAGVLGGTNYGMVGDVVNGATGADATTSTTGAPVATGAAGAAQSLTGLTGLIAGVLTGGS 315 Query: 426 ---------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 G LL AL +++ L+TP I+ D++ A VG+DVP ++G T G Sbjct: 316 FNYGGVNYPSIGTLLNALQTDSDVKTLSTPEILATDSQKAKITVGEDVPFITGQSQTVGG 375 Query: 477 NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS----NSTLGPTFNTRTIQ 532 NV ++R+ VG L +TP + D V L ++Q ++++ ++S +GPT R+ + Sbjct: 376 NVMTMIQRQNVGITLDITPHILAHDRVRLNLKQTITALTNASQLIGTMAVGPTTTKRSTK 435 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 + V++G+TVV+GGL+ S +P LG+IP++G LF T E+ + +L++F+ P Sbjct: 436 TILTVRSGQTVVIGGLISSEKSLNKSTIPWLGEIPVLGYLFSSTQNEKKRDDLLIFLTPY 495 Query: 593 IIRDDDVYRSLSKEKYTRYRQEQQQ 617 IIR+ + + + ++ ++ Sbjct: 496 IIRNAYSFAQVKHDAPAELKEAARK 520 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 31/230 (13%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 L + NF N DI V+ + L K I++D V+G +++ S + Sbjct: 48 TPLPTTLPAPLTPQTVSLNFRNVDISVMVKFMSDLLEKNIVMDERVKGKVTILSPRPVTI 107 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 E ++ F+ L + G+ + G + +V + + L Sbjct: 108 PEAFRVFVQALRMKGFETVEKK-GMIFIVPQNQAPMDRELF---------------LYNL 151 Query: 133 ENVPARDLAPLLRQMMDAG---------------SVGNVVHYEPSNVLILTGRASTINKL 177 EN A+ +A + ++ G + +V PSN L+++ + + + Sbjct: 152 ENTSAKSVAKTVNSILSKGFTPQPVGSIRQGGLEAPVQIVPDIPSNSLLVSATMNDYSII 211 Query: 178 IEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLS 227 +++ +D E L S + L I L+ S +L Sbjct: 212 KGLLRSLDRQPGEVYVKASLIEISTDKLNNIQVNLLGAVATGSNGAGVLG 261 >UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SM90_THIDA Length = 745 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 98/440 (22%), Positives = 174/440 (39%), Gaps = 39/440 (8%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR--QRITSL 254 L +++ + L + + + ++ K + ++ ++I P + Sbjct: 310 LNIVASDTVTGNLTLRLKDVPWDQALDLIMQTKGLDKRQNGNVIWIAPRDELLAKEKLEF 369 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL---------------------- 292 V + E T L Y +A +L G + Sbjct: 370 EAKKQVADLEPLVTDYIQLNYLRADEAQTMLYGFASGAFLNSAGNNAVNCSTQAQGLGGA 429 Query: 293 ---KDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 + + T + +TN+L+IT S ++ ++ARLD+ QV+ Sbjct: 430 AVAQAMQKGEGDTDQKVLTKRGRATYELKTNTLIITDTASKIAEVRGLLARLDVPARQVM 489 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW 409 +EA +V LGV+ + A N G+ +T Sbjct: 490 IEARVVIADSLWSRELGVRLGTRLFKATGRDNIGVGGTLNESASIAAGGTPTVTPQVELG 549 Query: 410 DMFSAYNGMAAGFFNGDWG----VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP 465 + +A +A N G + L+AL ++N+ IL+ P ++T + K A G +P Sbjct: 550 TVGAAAGQIAMSLLNASNGNLLSLELSALEADNRGKILSNPRVMTSNQKPAVILNGTQIP 609 Query: 466 VLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST---- 521 ++ N TV K L V PQ+ DA+++ IE + ++D+++ + Sbjct: 610 FITP----GTANSPATVTFKDAFLCLLVDPQILNNDALIMTIEVQKDAIDTANAAVGADI 665 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 + P TR I+ V V GET+VLGG+ D V KVP LGD+P +G LF+ T+ + Sbjct: 666 IAPAIATRRIKTQVRVNNGETLVLGGIFDQTEFNNVDKVPFLGDVPGLGNLFKRTNKQDQ 725 Query: 582 KRNLMVFIRPTIIRDDDVYR 601 K ++VFI P I+ + R Sbjct: 726 KTEMIVFITPRILDERLSLR 745 Score = 68.1 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 61/210 (29%), Gaps = 45/210 (21%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+ NF N ++R ++++ G I+ +V G +++R + I+ Sbjct: 284 SGEKLSLNFQNVEVRSVLQVIADFTGLNIVASDTVTGNLTLRL-KDVPWDQALDL---IM 339 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G N R + + + LVT + L + A + + Sbjct: 340 QTKGLDKRQNGNVIWIAPRDELLAKEKLEFEAKKQVADLEPLVTDYIQLNYLRADEAQTM 399 Query: 144 LRQMMDAG-----------------------------------------SVGNVVHYEPS 162 L G + + Sbjct: 400 LYGFASGAFLNSAGNNAVNCSTQAQGLGGAAVAQAMQKGEGDTDQKVLTKRGRATYELKT 459 Query: 163 NVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 N LI+T AS I ++ ++ R+DV + Sbjct: 460 NTLIITDTASKIAEVRGLLARLDVPARQVM 489 >UniRef50_B3TCB2 Putative bacterial type II and III secretion system protein n=2 Tax=environmental samples RepID=B3TCB2_9ARCH Length = 648 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 107/419 (25%), Positives = 178/419 (42%), Gaps = 39/419 (9%) Query: 179 EVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS 238 VI +V G+ ++I + + A ++ + L E G + + + A+ Sbjct: 265 NVILSPEVGGSVNIRMIDVPWNQAMEIILTNSALGRECFGGNIVRVATKVTLAAED---- 320 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 + ++ ++ + L+ +SE+ T V + +A T L L + KD Sbjct: 321 -----TARLSEKTRAVSERLNERDSEDLVTEVVRVNHADITELSTSLNALKSARKDA--- 372 Query: 299 ARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 IT D +TN+L++ + + + I LDI QVL+EA IVE+ Sbjct: 373 -------------LITIDTRTNTLILNDLRHHVDDMLETIKILDISTPQVLIEAKIVEIS 419 Query: 359 DGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM 418 LG+ W N T TG F+ Q + D + I + N A ++ + Sbjct: 420 KTFSQELGISWGLVNPEPGFPTVTGNSTFD-TQFLVDLRPTVDIATGNVA-----GFDSL 473 Query: 419 AAGFFNGD--WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 GF G+ V L AL + K ++++P + T DNK A G+D+P S Sbjct: 474 IQGFLPGNIALNVRLEALEKSGKGRVISSPRVTTADNKEARVLSGRDIPYQVNSVEG--- 530 Query: 477 NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVL 536 N+++ L VTP V +++ + I+ ++ D + + PT + + VL Sbjct: 531 ---NSIQFVNAELSLTVTPHVTSDNSIYMTIDATKNAADFAQLAAGIPTITRKEMHTEVL 587 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 V GET VL G+ + S E VP +PLVG LFR + L+VFI PTI+ Sbjct: 588 VGNGETTVLAGIYESTSTENKKAVPWFSKLPLVGFLFRAFDDKDTINELLVFITPTIVE 646 Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 72/169 (42%), Gaps = 6/169 (3%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL- 80 E E+ +F NAD+R I + G +++ P V G++++R D + + L Sbjct: 236 FGEKEKISLDFQNADVRNLFRIFAEISGFNVILSPEVGGSVNIRMID-VPWNQAMEIILT 294 Query: 81 -SIL--DLYGYSVITLDNGFLKVVRS-ANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 S L + +G +++ + A + +++ ++LVT +V + + Sbjct: 295 NSALGRECFGGNIVRVATKVTLAAEDTARLSEKTRAVSERLNERDSEDLVTEVVRVNHAD 354 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD 185 +L+ L + A + +N LIL ++ ++E IK +D Sbjct: 355 ITELSTSLNALKSARKDALITIDTRTNTLILNDLRHHVDDMLETIKILD 403 >UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae RepID=A7JQ17_PASHA Length = 437 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 92/347 (26%), Positives = 161/347 (46%), Gaps = 26/347 (7%) Query: 262 ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNS 321 + + T+ L YAKA+ ++E LT S E G I DE++NS Sbjct: 116 TAPKLITKTLKLHYAKASEVIESLTKGSGTFLSENG--------------YIHFDERSNS 161 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 L++ + + ++ +LD Q+ +EA IV + + LGV+W + GA + Sbjct: 162 LIVKDSAKSLKNIENLVKQLDQPTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGHYKF 221 Query: 382 TG-LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKN 440 G L + N IT A S+ N + L+AL N Sbjct: 222 GGRLEGNGLNNVTNNLNVNFPITGGASAVLQVSSINSRV-------LDLELSALEQENSV 274 Query: 441 DILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEG 500 +I+A+P ++T + K AS G ++P + + + + VE K L+V P ++ Sbjct: 275 EIIASPRLLTTNKKPASIKQGTEIPYVMYNTKSEATD----VEFKEAVLGLEVVPHLSTQ 330 Query: 501 DAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 + +LL++ +S +S S S+ T + + + V K GET+VLGG+ +++ KV Sbjct: 331 NQILLDLIVTQNSPNSQSGSSGLITIDKQELNTQVFAKHGETIVLGGIFQHLTQKGEDKV 390 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 P+LG IP + +LF T + +KR L++F+ P I++ ++ + K K Sbjct: 391 PILGSIPFIKRLFSQTRDKISKRELVIFVTPYILQSNEKSSNRKKSK 437 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 69/179 (38%), Gaps = 17/179 (9%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 A NA + + GK +++D +++ ++R + + F ++ Sbjct: 15 AYANTISIVLKNAPTSLIFTYLAEETGKNMVLDDNIETKSTLR----LENKSVDEIFKTL 70 Query: 83 LDLYGYSVITLDNGFL---KVVRSANVKTSPGMI----ADSSRPGVGDELVTRIVPLENV 135 + S+ D+ K ++A++ P M ++ +L+T+ + L Sbjct: 71 GKVNKLSLTQEDDIVYIHKKEEKAADLTPLPIMNLQNNGQNTPLVTAPKLITKTLKLHYA 130 Query: 136 PARDLAPLLRQ----MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 A ++ L + + G + E SN LI+ A ++ + ++K++D + Sbjct: 131 KASEVIESLTKGSGTFLSEN--GYIHFDERSNSLIVKDSAKSLKNIENLVKQLDQPTEQ 187 >UniRef50_C6EGE1 General secretory pathway component, cryptic n=2 Tax=Escherichia coli RepID=C6EGE1_ECOBD Length = 338 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 198/198 (100%), Positives = 198/198 (100%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG Sbjct: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG Sbjct: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV Sbjct: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 Query: 181 IKRVDVIGTEKQQIIHLE 198 IKRVDVIGTEKQQIIHLE Sbjct: 181 IKRVDVIGTEKQQIIHLE 198 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 142/144 (98%), Positives = 142/144 (98%) Query: 507 IEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 I EVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI Sbjct: 195 IHLEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 254 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL Sbjct: 255 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 314 Query: 627 VGSEDLPVLDENTFNSHAPAPSSR 650 VGSEDLPVLDENTFNSHAPAPSSR Sbjct: 315 VGSEDLPVLDENTFNSHAPAPSSR 338 >UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVZ8_9DELT Length = 504 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 90/342 (26%), Positives = 147/342 (42%), Gaps = 31/342 (9%) Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITA 315 + L E + R+ L YA L + L + D + +I Sbjct: 192 RKLAAELTAPLMHRIVKLNYADPEKLQDNLIRFLSRDGD------------GEPHGSIVV 239 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 DE+TNSL+I A ++ E++ I LD R Q+L+EA IVE LGV+W+ + V Sbjct: 240 DEETNSLMIQATRNDMERVHKAINHLDRPRPQILMEANIVEATQRTARELGVRWSGRYVT 299 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 F D G + + + ++A L AL Sbjct: 300 PLSFE--------------DEVGFGDLLRDEAGYTGDMDLSVISARLPGSVLYAHLQALE 345 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTP 495 + + +IL +PSI T+DN++A GQ VP + + S TVE + +L+V P Sbjct: 346 RDGEVNILTSPSITTMDNQMAFTEHGQRVPYETVDEDGS-----RTVEFEDAVLRLEVVP 400 Query: 496 QVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 V EG+ + ++I VD + + P T+ + ++V+ GET+V+ GL + + Sbjct: 401 SVMEGNHLKMDIRVNKDEVDFTRDVRGQPVIRTKHTETNLVVRDGETIVISGLSKETLSD 460 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 V L D+P +G LF+ E+ ++FI PTI+ Sbjct: 461 TERGVMGLRDLPGLGWLFKSREQEQEMEEFLIFITPTILEPQ 502 Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 75/194 (38%), Gaps = 19/194 (9%) Query: 26 EQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDL 85 ++ N A + + + + + I++ +V+GT ++ + F SI+ Sbjct: 101 DRVTLNMQQAPVATILRALSRIADQNIIVSETVEGTANLNI-RDVPWDQA---FKSIIAS 156 Query: 86 YGYSVITLDNGFLKVVRSANVKTS---PGMIADSSRPGVGDELVT----RIVPLENVPAR 138 G S + + L++ +++ G+ D R + EL RIV L Sbjct: 157 QGLSYV-WEGEILRIKSMQDLQHELDRAGLKEDIGRRKLAAELTAPLMHRIVKLNYADPE 215 Query: 139 DLAPLLRQMMDAGSV----GNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE---K 191 L L + + G++V E +N L++ + + ++ + I +D + + Sbjct: 216 KLQDNLIRFLSRDGDGEPHGSIVVDEETNSLMIQATRNDMERVHKAINHLDRPRPQILME 275 Query: 192 QQIIHLEYASAEDL 205 I+ +A +L Sbjct: 276 ANIVEATQRTAREL 289 >UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMQ3_PELPD Length = 864 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 104/409 (25%), Positives = 179/409 (43%), Gaps = 29/409 (7%) Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 + LE+A AE + QL+SE K+ ++ D T ++ I + + Sbjct: 472 VTLEFADAE--VRKIFQLLSEVSNKNF--------VLGDDVTGTISIKLVNVPWDQALDI 521 Query: 255 L-KSLDVEESEEGNTRVYYLKYAKATNLVEVLT-GVSEKLKDEKGNARKPSSSGAMDNV- 311 + + D+E E GN + A LV+ T + + KP +D V Sbjct: 522 ILDAKDLETREIGNVLTIKKRGAFKEQLVKQTTYTEYFSVNYSDAKSIKPQLEALLDPVL 581 Query: 312 ------AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 ITAD++TN++++T+ QS +++ + ++DI QV++EA IVE +L Sbjct: 582 LKEKLATITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQVMIEARIVEATSTFTRSL 641 Query: 366 GVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 GV W A + G+ + G T + +M ++ + G Sbjct: 642 GVNWGVHYTDASG-SLLGITQLDTGFGGITTAPPTSGTGDSAGGNMGISFGALGNGV--- 697 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 + L+A A+ I++ P + TL+NK A GQ +P T+ D + Sbjct: 698 QLDMRLSAAATAGLIKIISCPKVATLNNKKAKIAQGQQIPY------TASDGDNVETKFV 751 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 L+VTP +N + + I + S+ + S+ P NT+ +L++ GET V+ Sbjct: 752 EAALSLEVTPHINANGTISMNIVAKNDSMGDAVGSSTAPAINTKEATTEMLLRDGETTVI 811 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 GG+ D + + VP L DIP +G+ F+ S + K L+VFI P I+ Sbjct: 812 GGIFVDTDNDSDAGVPFLMDIPAIGKFFKTNSKTKTKTELLVFITPRIM 860 Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 19/181 (10%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY 75 + A + F +A++R+ +++ + K ++ V GTIS++ + + Sbjct: 460 PLGSAKEYWGRKVTLEFADAEVRKIFQLLSEVSNKNFVLGDDVTGTISIKLVN-VPWDQA 518 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 ILD + N L + + K T + Sbjct: 519 LDI---ILDAKDLETREIGN-VLTIKKRGAFKEQLVKQTTY----------TEYFSVNYS 564 Query: 136 PARDLAPLLRQMMDA----GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 A+ + P L ++D + + + +N +I+T S I+++ + ++D+ + Sbjct: 565 DAKSIKPQLEALLDPVLLKEKLATITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQV 624 Query: 192 Q 192 Sbjct: 625 M 625 >UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9K2_BURGB Length = 649 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 98/400 (24%), Positives = 169/400 (42%), Gaps = 43/400 (10%) Query: 219 KSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYA 276 + ALL A +A R +I P E A + E +R + L+Y Sbjct: 248 RDAFDALLDANGLAMARRGGVIWVAPVAELAARERARFETHARTAALEPLASRAFVLRYP 307 Query: 277 KATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLAT 336 +A ++ +LTG ++ AD +TN L +T ++A Sbjct: 308 RAKDVARLLTG------------GAAGQRVLSRRGSVLADPRTNLLFVTDLDGRLAQIAA 355 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ-------WANKNVGAQQFTNTGLPIFNA 389 ++A+LD QVL+EA IVE + G LG + W GA + G Sbjct: 356 LLAQLDRPSRQVLIEARIVEGERGFSRELGARLALRSSAWGGSRAGAGAGGSGGSDGGAG 415 Query: 390 AQGVADYKKNGGIT-------------SANPAWDMFSAYNGMAAGFFNGD--WGVLLTAL 434 + D G T SA P +A G+ + L+AL Sbjct: 416 GAAMPDSNPGGAATGIVGGPGGRLLDLSARPLAGFEAATAGLTLFVAGASRLLDLELSAL 475 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVT 494 + + I+++P IVT D A G ++P + V+ + KL+V Sbjct: 476 EAQGRGRIVSSPRIVTADRAPALIEQGTELPYQAKVGLGVSG-----VQFRRATLKLEVE 530 Query: 495 PQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSK 554 PQ+ V+L+++ SV S+++ GP +T+ ++ V ++ G TV +GG+ + + Sbjct: 531 PQITPEGHVVLDLDVAKDSVGESTDA--GPAIHTKHVRTRVEIENGGTVSIGGIYESDRR 588 Query: 555 EQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 + V++VP+LG IP++G LFR+ + + L+V+I P ++ Sbjct: 589 DDVTRVPVLGKIPMLGALFRHRARRQRTAELVVYITPRVV 628 Score = 75.8 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 64/170 (37%), Gaps = 12/170 (7%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 + + A + + + G++I++ VQG ++R ++ + LD Sbjct: 203 RISLDLQQAPLAAVFDAFARFTGQSIVLSGRVQGAATLRL-RDVPWRDAFDAL---LDAN 258 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL-- 144 G ++ + +R + L +R L A+D+A LL Sbjct: 259 GLAMARRGGVIWVAPVAELAARERARFETHARTAALEPLASRAFVLRYPRAKDVARLLTG 318 Query: 145 ----RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 ++++ G+V+ +N+L +T + ++ ++ ++D + Sbjct: 319 GAAGQRVLSR--RGSVLADPRTNLLFVTDLDGRLAQIAALLAQLDRPSRQ 366 >UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Methylococcus capsulatus RepID=Q609V4_METCA Length = 751 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 94/341 (27%), Positives = 158/341 (46%), Gaps = 18/341 (5%) Query: 295 EKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 + S + +N + AD N+L++ A +++ VI LD+ QVL++A I Sbjct: 425 SGAGGQGASMTQLGNNARVVADPANNALIVIAKPQDWKEIEAVIKALDVLPLQVLIDATI 484 Query: 355 VEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 VE+ N L G++W + + + + L +GG + A A Sbjct: 485 VEISLKNDLQYGLKWLISSGSSTEALGSPLAALVKDFINGAASASGGFSYALIANG---- 540 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 G+ VLL LA N +++++PS++ L+N+ A NVG VPVL+G+ ++ Sbjct: 541 ----------GNVKVLLNLLAQENLVNVISSPSLMVLNNQQAKINVGDQVPVLTGTTASA 590 Query: 475 --GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFN--TRT 530 G FN +++ G L++ P+VN G V LEI Q +S+ + TF R Sbjct: 591 TIGTTQFNQFQQQQSGVTLQIRPRVNSGGLVSLEIFQAISTPSPVEVGSGQKTFQFANRE 650 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 IQ+ V V G+T+ LGGL+ D E + +P L IP++G +F T + + L+V I Sbjct: 651 IQSVVAVPNGQTLALGGLISDKRSETQTGLPYLNQIPMIGWMFGSTEIKPERTELVVLIT 710 Query: 591 PTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED 631 P ++ S+S E + + D + A+ S Sbjct: 711 PRVVEKKGDINSISNEFRRKLTNLYRGEPDAQPAAVEPSTP 751 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 130/296 (43%), Gaps = 14/296 (4%) Query: 25 NEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 +Y NF++AD+ + +++ G L ++ P V G +S+++ ++ E ++L Sbjct: 51 EGKYTLNFDDADLSEVTKVILGDTLKVNYVLSPKVTGKVSLQTTRPLTEDEMIPTLETLL 110 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSP-GMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 + G ++I + G K+ A S G G +L R++PL + A ++ Sbjct: 111 RMNGAALIR-EGGMYKIEPDAQAAISASGPGVGLGMMEPGYQL--RVIPLRYISAAEMQK 167 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQIIHLEYA 200 +L +M +V + E N++++ G A + ++E ++ DV + ++ A Sbjct: 168 VLEPIMPPKAV--LRMDETRNLVMVAGTAEELGGVMEAVQIFDVDYMRGMSVALYPVKNA 225 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPE-KARQRITSLLKSLD 259 +A+ L +++ GK M +L +I+ +R N+++ PE + ++ LD Sbjct: 226 DVPTIADELTKVLGL-GGKGAMGNVL--RILPIERLNAILAVAPEMHLLHEVQDWIERLD 282 Query: 260 -VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 + GN VY ++ A L L G+ +G + P +G I+ Sbjct: 283 RYNTTRTGNVHVYRCQHVDAGELAHTLGGIFGGGAGRQGPSLAPGLTGMDVGSGIS 338 >UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxobacter RepID=A7H857_ANADF Length = 893 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 102/448 (22%), Positives = 174/448 (38%), Gaps = 59/448 (13%) Query: 162 SNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQ 221 N+L L S ++ DV G + ++ + A DL L S+ GK + Sbjct: 481 RNLLRLIADVSK----KNIVVADDVTGKVTVALRNVPWDQALDLV-----LKSKGLGKEE 531 Query: 222 MPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNL 281 M ++ I A+++ R+ + +A+A ++ Sbjct: 532 MGNVIR------------IARFEAIAKEQQARAEAEKARIPLMPLKVRIIPVNFARAGDV 579 Query: 282 VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 + V + +++ DE+TN L++ Q + ++ L Sbjct: 580 SGRVKDVLS------------------ERGSVSTDERTNVLIVKDVQEALVRAEGLVRNL 621 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN-TGLPIFNA----------A 390 D QVL+E+ IVE LGVQW Q N TG+ N Sbjct: 622 DTEIPQVLIESRIVEASSNFNKALGVQWGGNASFTQATGNPTGVAFPNNVAAAGGAGPGN 681 Query: 391 QGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG--DWGVLLTALASNNKNDILATPSI 448 N ++ P D G+ G G + + L+AL +N ++ P I Sbjct: 682 SFGTAANPNYAVSLPAPVGDGQGGALGLVFGSAGGAFNLNLRLSALENNGVVKTISAPKI 741 Query: 449 VTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIE 508 T+DN+ A+ G +P S + +LKVTP V+ ++LL+I+ Sbjct: 742 ATIDNREATIGQGISIPFSQVSASGVNTT------FIEAKLELKVTPHVSADGSILLKIK 795 Query: 509 QEVSSVDSS-SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 + + + + P+ + R + VLVK GET V+GG+ + + S+VP LG +P Sbjct: 796 ATNNQPNPQLTGANGQPSISKREAETEVLVKDGETTVIGGIYTRQTANRTSEVPFLGKLP 855 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIR 595 L+G FR S + L++FI P I+ Sbjct: 856 LLGYFFRNMSEQDDHTELLIFITPRILN 883 Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 8/171 (4%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 P A + +F++ DIR + ++ K I++ V G ++V + Sbjct: 460 APQARGYSGRRITLDFHDIDIRNLLRLIADVSKKNIVVADDVTGKVTVAL-RNVPWDQAL 518 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVR-SANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 +L G + N +++ R A K L RI+P+ Sbjct: 519 DL---VLKSKGLGKEEMGN-VIRIARFEAIAKEQQARAEAEKARIPLMPLKVRIIPVNFA 574 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 A D++ ++ ++ G+V E +NVLI+ + + +++ +D Sbjct: 575 RAGDVSGRVKDVLS--ERGSVSTDERTNVLIVKDVQEALVRAEGLVRNLDT 623 >UniRef50_B8CZ92 Type II and III secretion system protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ92_HALOH Length = 602 Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 125/633 (19%), Positives = 245/633 (38%), Gaps = 69/633 (10%) Query: 3 GLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTI 62 + ++ L LL+ + + E ADIR + ++ + G ++ D +VQG + Sbjct: 20 YITRVFGVALTVLLIVTSTVSAEELVDVTVRGADIRDVLLMLTEQSGINLVPDETVQGEV 79 Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG 122 ++ QE + YGY + V R + V Sbjct: 80 TINL-RDVDLQEALKTLTMA---YGYHFEKVSENVYLVSRDK--------LEAPVDVRVK 127 Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 D +T + +L LLR++ D S+ V+ S + + I + +I Sbjct: 128 DGFLTV-----HATNANLRTLLREIADKASINIVMDDSVSGKISI--DLENIPLEVGLIN 180 Query: 183 RVDVIG------TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 + V G +I + + +LA + + + Sbjct: 181 LLHVNGFSLSKSNSVYRIFKADNNTGNNLAISVVDNRVSMDVSQANLGDVLRTLARLGDL 240 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLK------------YAKATNLVEV 284 + ++ G + + E TR Y K + A++L+ Sbjct: 241 DMVLFGGVRDIVDLKLEDISLDEAIEIILAGTRYTYRKVDGVYLIGDKNINSPASDLLTT 300 Query: 285 LTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIR 344 + + + + + ++ NV + ++ N+L++T QS KL I ++D R Sbjct: 301 SELIPMEYIEVEKVPQLLPNNFPAANVKVL--KEKNALLVTGTQSDINKLKEYIKQIDTR 358 Query: 345 RAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITS 404 ++VEA++VE+ N ++ + G ++ +F+ + G YK Sbjct: 359 IPLIVVEAVVVELTRNRQENPVIKLGMEYDGEEEL------LFDTSMGKLTYK------- 405 Query: 405 ANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464 + D+ + + AL + + A P+I TL+ + A +VG V Sbjct: 406 --------------SVLDLPDDFYLKIEALVTEGLLTVKARPNITTLNGQQAMIDVGT-V 450 Query: 465 PVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGP 524 QT N + G L VTP V+ + L++ +VS++ ++ + P Sbjct: 451 QYYKVKQTDGEGNEETQYQSINAGVSLTVTPWVSSSGEITLKLRPQVSNI-GAAAAEGPP 509 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 + R + V VK G+TVV+GGL+ D SKVP L +IPL+G+LF+ + + Sbjct: 510 QVSRREVDTTVRVKDGQTVVIGGLIQDVGTNTTSKVPFLANIPLIGKLFKSRNNNVNQTE 569 Query: 585 LMVFIRPTIIR-DDDVYRSLSKEKYTRYRQEQQ 616 L++FI P +++ +++ +S K+ + R++ Q Sbjct: 570 LIIFITPRVLKVNEEEVKSKMKKMLEKSREQLQ 602 >UniRef50_B1J2J3 Type IV pilus secretin PilQ n=5 Tax=Pseudomonas RepID=B1J2J3_PSEPW Length = 422 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 81/379 (21%), Positives = 154/379 (40%), Gaps = 40/379 (10%) Query: 225 LLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE---ESEEGNTRVYYLKYAKATNL 281 +L +K + + ++++ P +L + +E +S + + +A+A+ L Sbjct: 78 VLRSKGLGRREEGNVLLVAPAVELAE-QALGARMGLELEAQSRPLRRELLPIHHAEASEL 136 Query: 282 VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 E+L G +++ D +TN+LV + +L ++A+L Sbjct: 137 AELLLATLADDGILTG------------RGSLSVDVRTNTLVAHQPEDRLAELRQLVAQL 184 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 D+ QV +EA IVE +LGV+W + ++ G Sbjct: 185 DVPVRQVEIEARIVEANVDYENSLGVRWG-------------------PRLYSEAPALGK 225 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 + + + G + L+A+ +I++ P +VT +N+ A G Sbjct: 226 DVFVDLGMERAGSSIGFGVLRGGVLLDLELSAMEKTGNGEIISQPKVVTANNETARILKG 285 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST 521 +VP +++ + +V + L+VTPQ+ V++ ++ D + Sbjct: 286 TEVPYQETTKSGA-----TSVTFREASLSLEVTPQITPDGKVIMTVKVTKDEPDFVNALN 340 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 P + V V GET+V+GG+ V KVP GD+P VG+LFR + + Sbjct: 341 DVPPIRKNEVNAKVRVADGETIVIGGVYSTTQNNVVDKVPFFGDLPYVGRLFRRDALQEK 400 Query: 582 KRNLMVFIRPTIIRDDDVY 600 K L+VF+ P I+ D + Sbjct: 401 KSELLVFLTPRIMNDQAIA 419 Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 74/191 (38%), Gaps = 8/191 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 M GL K L + + A E NF + ++R ++++ + G ++ +VQG Sbjct: 1 MNGLMKWLVAALLPMPLLAATPYRGEPISLNFQDVEVRLVLQVLADYAGINLVASDTVQG 60 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 +I++R D + + +L G N L + + G Sbjct: 61 SITLRLQD-VPWDQALEL---VLRSKGLGRREEGNVLLVAPAVELAEQALGARMGLELEA 116 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSV----GNVVHYEPSNVLILTGRASTINK 176 L ++P+ + A +LA LL + + G++ +N L+ + + Sbjct: 117 QSRPLRRELLPIHHAEASELAELLLATLADDGILTGRGSLSVDVRTNTLVAHQPEDRLAE 176 Query: 177 LIEVIKRVDVI 187 L +++ ++DV Sbjct: 177 LRQLVAQLDVP 187 >UniRef50_A6C2R4 Type IV pilin multimeric outer membrane protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2R4_9PLAN Length = 799 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 91/461 (19%), Positives = 190/461 (41%), Gaps = 24/461 (5%) Query: 186 VIGTEKQQIIHLEYASAE-----DLAEILNQL-ISESHGKSQMPALLSAKIVADKRTNSL 239 + + L+ AE D+ L+ L I G + + + + +++ Sbjct: 272 SPNNDSSETFSLQIQDAEIMQVLDMLGELSGLNILTGQGVTGTISANLKNVTPAQALDAI 331 Query: 240 IISGPEKARQR------ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK 293 + S + + +T L + S + T++Y Y A L ++T + + Sbjct: 332 LRSRDLTSEKEGEFIYVMTQAQLELKKKSSRKVITKLYSPFYISAKELQNLITPILTENV 391 Query: 294 DEKGNARKPSSSGAMDNVAITAD--EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 A D + D QT+S+++ + E++ ++ ++DI QV++E Sbjct: 392 GIVSLTSPSEVGIAPDPTSAGGDSFAQTDSILVRDYPEILEEVDRLLEKMDIPPMQVVIE 451 Query: 352 AIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM 411 A+I+ V + + GV +A + G N + + +G + P Sbjct: 452 AMILSVALNDDMKFGVNFAMLGGNNKNLVVDGN--GNTLNNASGFPGSGSSSIVPPTGQF 509 Query: 412 FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 + G+ GF +GD + AL + +++A+P + L+ + A +G + + +Q Sbjct: 510 IADVAGLKYGFLHGDISGFIEALEDVTETNLIASPQLRALNKQKAELIIGDRISYSTVTQ 569 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTI 531 +G+ V G L + P + + +E+ E SS + ++ L P T + Sbjct: 570 --NGNTSIQNVNFLDSGIVLNLRPFITPDGQIRMEVHPERSSATINPSTNL-PDLRTTEV 626 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 V+V+ G TVV+GGL+++ + + ++VP LG +P++G FR + L+V I P Sbjct: 627 TTNVMVRDGHTVVIGGLIEERTSDTRNQVPFLGALPVIGNAFRQQREITNRTELIVLITP 686 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 I+R + + E +R++ K+ + + Sbjct: 687 RIVRAEAALAE-----GEILKHEGAERLENFKKSFLPINQV 722 Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 74/197 (37%), Gaps = 32/197 (16%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQ 73 +L + +E + +A+I Q ++++G+ G IL V GTIS + + Sbjct: 267 PVLKISPNNDSSETFSLQIQDAEIMQVLDMLGELSGLNILTGQGVTGTIS-ANLKNVTPA 325 Query: 74 EYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLE 133 + +IL + + F+ V+ A ++ + +++T++ Sbjct: 326 QALD---AILRSRDLTS-EKEGEFIYVMTQAQLEL---------KKKSSRKVITKLYSPF 372 Query: 134 NVPARDLAPLLRQMMDAG---------SVGNVVHYEPS---------NVLILTGRASTIN 175 + A++L L+ ++ S + S + +++ + Sbjct: 373 YISAKELQNLITPILTENVGIVSLTSPSEVGIAPDPTSAGGDSFAQTDSILVRDYPEILE 432 Query: 176 KLIEVIKRVDVIGTEKQ 192 ++ +++++D+ + Sbjct: 433 EVDRLLEKMDIPPMQVV 449 >UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TDF1_RICCO Length = 536 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 88/388 (22%), Positives = 169/388 (43%), Gaps = 37/388 (9%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 ++ K + + ++ P E A +R + ++E++ T+ + +KY KA ++ Sbjct: 165 IMKQKGLGMDNLGNTLVFAPKEEIAARRKQDQEQENQIDETKPLVTQSFQIKYQKAADIK 224 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 +++ + L ++G A D TN++ + + K+ ++ ++D Sbjct: 225 TLISDPKQPLLSKRGTA--------------VVDPSTNTMFVKDIDTSMTKIQEILNKID 270 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQWA--NKNVGAQQFTNTGLPIFNAAQGVADYKKNG 400 I QVL+E+ IV+ D G +LG ++ N + N G + + + Y Sbjct: 271 IPSRQVLIESRIVQANDTFGKSLGARFGVVKNNALTAKGLNPGNDVLTSGSLSSTYATGQ 330 Query: 401 GITSANPAWDMFSAYNGMAAGFFNGD------------WGVLLTALASNNKNDILATPSI 448 + P + AG + + L+A S++K +++P + Sbjct: 331 AKQTTTPDDLNVNLPASATAGTVSSAALTLLRLPAGFLLNMELSAAESDSKIKTISSPRV 390 Query: 449 VTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIE 508 +T + + A+F+ G ++P + + + +V K + VTPQ+ D + L+IE Sbjct: 391 ITANQQTATFDAGTEIPYQQATSSGA-----TSVSFKKATLGVNVTPQITPDDKINLDIE 445 Query: 509 QEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPL 568 V N P+ +T ++ VLV GET VLGG L + + +VP IP+ Sbjct: 446 VTKDDVGQIFNGV--PSIDTNKVKTKVLVDNGETAVLGGFLIESKNDSNQRVPFFSSIPV 503 Query: 569 VGQLFRYTSTERAKRNLMVFIRPTIIRD 596 VG LF+ T +K+ L+ FI P I+ D Sbjct: 504 VGNLFKSTLNTHSKKELLFFITPKIMSD 531 Score = 78.9 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 70/171 (40%), Gaps = 10/171 (5%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+ +FN D++ + I+G GK +++ S+QGTI++R + I+ Sbjct: 111 SGEKLSLDFNGIDVKSLLRIIGDFTGKNVVVSDSIQGTITLRL-KDVPWDQALDI---IM 166 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G + L N + + ++ LVT+ ++ A D+ L Sbjct: 167 KQKGLGMDNLGNTLVFAPKEEIAARRKQDQEQENQIDETKPLVTQSFQIKYQKAADIKTL 226 Query: 144 L----RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 + + ++ G V +N + + +++ K+ E++ ++D+ + Sbjct: 227 ISDPKQPLLSK--RGTAVVDPSTNTMFVKDIDTSMTKIQEILNKIDIPSRQ 275 >UniRef50_Q0AF45 Type IV pilus secretin PilQ n=3 Tax=Nitrosomonas RepID=Q0AF45_NITEC Length = 720 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 95/419 (22%), Positives = 180/419 (42%), Gaps = 46/419 (10%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ + L + + + +L + +R ++I P E A + L Sbjct: 320 LNIIASDSVKGNLTLRLKDVPWDQALDIVLQTSDLDKRRVGNVIFIAPREEMAARERLQL 379 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 ++ + E E T + L Y A+++ P ++ Sbjct: 380 EQNQQITELEVLQTEAFRLNYRTASSI--------------------PLKGILSQRGSVE 419 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 D+ +N+L +T + ++A +A LD + QV++E IVE D NLG ++ +N Sbjct: 420 VDDISNTLTVTDIPTRLAEVARHVANLDTQVRQVMIETRIVEATDTFSRNLGARFGVQNA 479 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-------- 426 G + + + G S + ++ A G Sbjct: 480 TRIGSQTNGRRLGISGNLGNSSELAAGTISPSGGDNLNVNLPAAALAGVAGGPAALGLSL 539 Query: 427 --------WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV 478 + L+AL S+++ I+A+P +VT + AS G ++P + S T Sbjct: 540 IKINNGTLINLELSALESDSQGRIIASPRLVTANRVEASIEQGTEIPFQTISVT------ 593 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 ++ K LKVTPQ+ D +++++ +V+ ++ GP +T+ I VLV+ Sbjct: 594 RPQIQFKKAVLGLKVTPQITPDDNIIMKL--QVNQDTRGESTPAGPAIDTKQIVTEVLVE 651 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 G TVV+GG+ + K +++PLLGD+PL+G LF+ T+ KR L++F+ P I+ ++ Sbjct: 652 NGGTVVIGGIFEQVEKRDRNQIPLLGDVPLLGNLFKNTAKRDDKRELLIFVTPRILNEN 710 Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 57/162 (35%), Gaps = 8/162 (4%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 E+ NF + +IR ++++ I+ SV+G +++R + +L Sbjct: 295 GEKLSLNFQDVEIRSILQVIADFTDLNIIASDSVKGNLTLRL-KDVPWDQALDI---VLQ 350 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 + N R + + + + L T L A + L Sbjct: 351 TSDLDKRRVGNVIFIAPREEMAARERLQLEQNQQITELEVLQTEAFRLNYRTASSIP--L 408 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 + ++ G+V + SN L +T + + ++ + +D Sbjct: 409 KGILSQ--RGSVEVDDISNTLTVTDIPTRLAEVARHVANLDT 448 >UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIY3_THIDA Length = 656 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 127/575 (22%), Positives = 216/575 (37%), Gaps = 79/575 (13%) Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 + + N L + + I + G + R + P L Sbjct: 120 AALQQANKALAAGKVDAAAQAAREILAQAPGHAGALALLRQTQAAHAPDELAMRRLGPAF 179 Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEI 208 NV + R S +N + + R+D T + ++ ++ Sbjct: 180 HKPITLEFRDAPLRNVFDMIARQSGLNFVFDKDVRLDTKAT-----LFARNTPIDEAVDM 234 Query: 209 LNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNT 268 L M LS K+V N+L+I + +Q+ E Sbjct: 235 L-----------LMTGQLSKKVV---NANTLLIYPDQPQKQKAYQ-----------ELMV 269 Query: 269 RVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQ 328 + +YL A A + +L + + + DE+ N LV+ Sbjct: 270 KSFYLGNADAKATMAMLRTLVKAK-------------------DLHVDERLNLLVMRDTP 310 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFN 388 ++A D+ +V++E ++EV+ G L+LG+Q+ T + N Sbjct: 311 DAIRLAERIVAVQDLAEPEVMLEVEVLEVKRGRLLDLGIQYP-----------TNFSLLN 359 Query: 389 AAQGVADYKKNGGI---TSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILAT 445 + GG+ T+ P+ + + A + ++ +ILA Sbjct: 360 LPPATSSTIGPGGVVTNTTPPPSVLTVESLKNITASQIAISPTPGVDLRKQDSDVNILAN 419 Query: 446 PSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLL 505 P I + + A ++G VPV++ S TTS V +V VG KL V P V + V + Sbjct: 420 PRIRVKNREKAKIHIGDKVPVIT-SNTTSTGVVSESVSYLDVGLKLDVEPSVLMREDVQI 478 Query: 506 EIEQEVSSV---DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPL 562 + EVS++ S N TL TR + +K GET VL GL+ D + S++P Sbjct: 479 RVGLEVSNIVREIRSGNGTLTYQIGTRNAGTTLRLKDGETQVLAGLISDEDRSTASRIPG 538 Query: 563 LGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGK 622 LGD+PL+G+LF ER K +++ I P ++R D + T +R + I G Sbjct: 539 LGDLPLIGRLFSSQRDERNKTEIVLLITPRVLRSD----ATRLPALTEFRGGTENAIGGG 594 Query: 623 S------KALVGSEDLPVLDE--NTFNSHAPAPSS 649 AL + P+ DE + ++ APAP S Sbjct: 595 GAVPFSAPALPEASQPPLPDEGPTSPSAIAPAPES 629 Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 67/196 (34%), Gaps = 23/196 (11%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQ--GTISVRSNDTFSQ 72 L M G A ++ F +A +R +++ + G + D V+ ++ + Sbjct: 170 LAMRRLGPAFHKPITLEFRDAPLRNVFDMIARQSGLNFVFDKDVRLDTKATLFA-RNTPI 228 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 E L KVV N T + EL+ + L Sbjct: 229 DEAVDMLLMT-----------GQLSKKVV---NANTLLIYPDQPQKQKAYQELMVKSFYL 274 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE-- 190 N A+ +LR ++ A ++ E N+L++ I ++ D+ E Sbjct: 275 GNADAKATMAMLRTLVKAK---DLHVDERLNLLVMRDTPDAIRLAERIVAVQDLAEPEVM 331 Query: 191 -KQQIIHLEYASAEDL 205 + +++ ++ DL Sbjct: 332 LEVEVLEVKRGRLLDL 347 >UniRef50_Q47JK8 Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal n=2 Tax=Betaproteobacteria RepID=Q47JK8_DECAR Length = 715 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 100/386 (25%), Positives = 171/386 (44%), Gaps = 17/386 (4%) Query: 225 LLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 + K + ++ ++I+ P E A + + E E + L Y KA ++ Sbjct: 328 IFQQKGLDMRKKGNIIMIAPRDEIATREKLEFESKQQISELEPLKLEQFQLNYQKAADVA 387 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNV-----AITADEQTNSLVITADQSVQEKLATV 337 +L G+ A P ++ A + + AD Q+N + I S E++ + Sbjct: 388 RLLAGLPPLGAAGAAAAPAPGTNVAAQRILSKRGSAVADPQSNIIFINDIPSKLEEIRSF 447 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 IA +D QVL+EA +VE QD LG ++ N A Q +G+ + + A Sbjct: 448 IAAIDTGARQVLIEARVVEAQDSFNRALGGKFGFLNKQAVQPAGSGINVAGGSSTTAGQS 507 Query: 398 KNG---GITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNK 454 + G+ +P+ A + A F + + L AL S+ I+++P ++T +N Sbjct: 508 TSTPMVGVNLPSPSTGGSLALSLFTASF-SRILNLELAALESDGLGKIVSSPRVITANNV 566 Query: 455 LASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV 514 A G ++P ++ + TV K L+VTPQ+ V + + + Sbjct: 567 KAKIEDGTEIPYVTTQSSGG--TTTATVSFKPAKLSLEVTPQITPEGTVRMNLVVKKEEA 624 Query: 515 DSSSNSTLG----PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 D + L P + ++ V+V+ G TVV+GG+ ++ V KVPLLGDIP G Sbjct: 625 DWTKAVVLNGYANPPIKSSVVETNVVVENGGTVVIGGVFITDTQNSVEKVPLLGDIPFFG 684 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRD 596 LF+Y + +R L+VFI P +I D Sbjct: 685 WLFKYKNDIGKRRELLVFITPRVISD 710 Score = 44.2 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 54/190 (28%), Gaps = 29/190 (15%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + + N+ N D+R + ++ + LG +I +V + + I Sbjct: 274 QGPRVSINYQNGDVRALLRLMAEELGLNAVISETVT-GTTTLVLKDVPADQVIDI---IF 329 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP- 142 G + N + R + + L L A D+A Sbjct: 330 QQKGLDMRKKGNIIMIAPRDEIATREKLEFESKQQISELEPLKLEQFQLNYQKAADVARL 389 Query: 143 ----------------------LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 ++++ G+ V SN++ + S + ++ Sbjct: 390 LAGLPPLGAAGAAAAPAPGTNVAAQRILSK--RGSAVADPQSNIIFINDIPSKLEEIRSF 447 Query: 181 IKRVDVIGTE 190 I +D + Sbjct: 448 IAAIDTGARQ 457 >UniRef50_A1HM79 Type II and III secretion system protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HM79_9FIRM Length = 414 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 88/376 (23%), Positives = 157/376 (41%), Gaps = 28/376 (7%) Query: 230 IVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 + A + I + +IT L+++ E + + T+ L Y K N++ V + Sbjct: 57 LTALASVGRVSIVADDSVTGKITIQLRNIPFETALDLVTKTKGLTYYKTGNVIVVASADK 116 Query: 290 E----------KLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIA 339 KLK + + K S + + + + DE TNSLV + + E L +A Sbjct: 117 LSKGFGSVQIIKLKYARADEVKKSLALVIPDERLKVDEATNSLVFSGSPAESEALRQALA 176 Query: 340 RLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKN 399 LD+ QV +EA +V + +LG W + A ++ + K Sbjct: 177 ELDVPYEQVSLEAQVVAINRNAAKDLGFDWQWSGLPANTEFDSTSGTTKTTREYPGVIKF 236 Query: 400 GGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFN 459 G P + + L+AL ++ + +LA P I T++ K A Sbjct: 237 GKAYDGTP---------------YEFTFQAKLSALITSGEAKLLAKPKITTINGKEAKIL 281 Query: 460 VGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN 519 +G +PVL + T T+E G KL TP++N + + EVS+ Sbjct: 282 IGDRIPVLV--ERTENGKTTTTIEYIDAGIKLTYTPRINADGYITAAVHTEVSTPTLVPE 339 Query: 520 STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE 579 TR V +K G+T+V+GGL+ + ++VPLL D+P++G+LF Sbjct: 340 MK-AYRVTTREATTNVRMKDGDTMVIGGLISNEESGGKNRVPLLSDLPVLGKLFESVHKT 398 Query: 580 RAKRNLMVFIRPTIIR 595 + + +++F+ I++ Sbjct: 399 KNETEVVIFLTARIVK 414 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 73/197 (37%), Gaps = 35/197 (17%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 + A N +A++R + + +I+ D SV G I++ + Sbjct: 33 VMPPALAAGPMVNMNVTDAEVRDVLTALASVGRVSIVADDSVTGKITI---------QLR 83 Query: 77 QF-FLSILDL----YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP 131 F + LDL G + N + +A + + G V +I+ Sbjct: 84 NIPFETALDLVTKTKGLTYYKTGNVIV--------------VASADKLSKGFGSV-QIIK 128 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE- 190 L+ A ++ L ++ + E +N L+ +G + L + + +DV + Sbjct: 129 LKYARADEVKKSLALVIPDE---RLKVDEATNSLVFSGSPAESEALRQALAELDVPYEQV 185 Query: 191 --KQQIIHLEYASAEDL 205 + Q++ + +A+DL Sbjct: 186 SLEAQVVAINRNAAKDL 202 >UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHB7_9DELT Length = 1125 Score = 248 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 103/448 (22%), Positives = 180/448 (40%), Gaps = 63/448 (14%) Query: 172 STINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIV 231 S I ++ +I +V GT ++ + + A D+ L L + + + + + Sbjct: 716 SDIGRV-NIIAGPEVQGTVTMKLSAVPWDQALDII--LRSLNLGMVQEGNVIRVATQATL 772 Query: 232 ADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEK 291 D+R ++ E+A R+ + + TR+ L YA +++ + V Sbjct: 773 EDERRKAI-----EEANARV----------QLKPLETRLISLSYADVGDMLPKVQSVLS- 816 Query: 292 LKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 +T D +TN+L++ +++ +LD + QVL+E Sbjct: 817 -----------------SRGTVTPDTRTNTLIVMDVAENIALAESLVRQLDSQTPQVLIE 859 Query: 352 AIIVEVQDGNGLNLGVQWANKNVGAQQFTN-TGLPIFNAAQGVADYKKN----------G 400 A IVE + LG+QW V + N TGL NA N G Sbjct: 860 ARIVEARTNWLRQLGIQWGFDFVASPGTGNPTGLLFPNAIGIGGGSGSNQSPVNGLILPG 919 Query: 401 GITSANPAWDMFSAYNGMAAGFFNGDWG---------VLLTALASNNKNDILATPSIVTL 451 + N A D+ + + G +G + L+A + I++ P IVTL Sbjct: 920 AAANPNYAVDLPAVVGTGSGGALGFSFGSLSGNLNTNLRLSAAENEGDVRIISAPKIVTL 979 Query: 452 DNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 DN A G +P+ S L+VTPQV AVLLE+E + Sbjct: 980 DNTEAQIEQGVQIPIAQVSAQGVNT------RYVNATLGLRVTPQVTNEGAVLLEVEVQK 1033 Query: 512 SSVDSSSNSTLG-PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 + D + G PT T++ ++ +L+ G+T V+GG+ SKVP DIP++G Sbjct: 1034 NEADFVNTGARGDPTILTKSARSQLLITDGDTAVIGGIYTRNQAINHSKVPWFADIPIIG 1093 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDD 598 F+ + + +++F+ P I+ + Sbjct: 1094 WFFKNRTERDDRSEMLIFLTPRIVNRSE 1121 Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 8/167 (4%) Query: 21 GHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL 80 E +A I+ + + I+ P VQGT++++ + + Sbjct: 692 SRWRGEPIDIELQDAPIKDVLLLFSDIGRVNIIAGPEVQGTVTMKLS-AVPWDQALDI-- 748 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDE-LVTRIVPLENVPARD 139 IL ++ N ++V A ++ + + V + L TR++ L D Sbjct: 749 -ILRSLNLGMVQEGN-VIRVATQATLEDERRKAIEEANARVQLKPLETRLISLSYADVGD 806 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 + P ++ ++ S G V +N LI+ A I +++++D Sbjct: 807 MLPKVQSVLS--SRGTVTPDTRTNTLIVMDVAENIALAESLVRQLDS 851 >UniRef50_C4V5Y4 Fimbrial type IV assembly protein pilQ n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V5Y4_9FIRM Length = 428 Score = 248 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 15/339 (4%) Query: 264 EEGNTRVYYLKYAKATNLVEV----LTGVSEKLKDEKGNARKPSSSGAMDNV--AITADE 317 + Y ++YA L LTG ++ K N S +V + D Sbjct: 99 AQRRVHTYTVRYADPEELAHAANLSLTGEGKRAIVSKPNKDIGESGDQSSDVQRRVLVDT 158 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ 377 TN+L+ +S + +++ LD QV +EA +V V LGV W+ ++ Sbjct: 159 ATNTLLFYGTESEAFAVREIVSALDTAPRQVSLEARVVAVSKRAAKELGVDWSWSSL--P 216 Query: 378 QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASN 437 Q+ N G ++ G+ F+ + + AL + Sbjct: 217 QYPNVTRDSAGNWHVSGRNAGTAGRSAPG-VIRFGRGPEGLPYEFY---YSAAIRALITE 272 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQV 497 K +LA P++ T+ + A N+G +VPV + + + +E + G L+ TP+V Sbjct: 273 GKAKMLARPNVTTVQGREALINIGAEVPVPVVTTSNNVTTTG--IEYREAGIILRYTPRV 330 Query: 498 NEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQV 557 ++ + EVS+ + F R+ V +K GET+V+GGL+D + Sbjct: 331 TADGNIVAHVHTEVSTPVF-VDDLKAYRFQKRSADTTVRLKNGETMVIGGLIDSDESRTL 389 Query: 558 SKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 +K+P LGD+PL+G FR T + + LM+F+ ++ + Sbjct: 390 AKIPFLGDLPLLGAFFRTVRTSKNESELMIFLTAHVLDE 428 >UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2F0_9DELT Length = 514 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 104/397 (26%), Positives = 164/397 (41%), Gaps = 30/397 (7%) Query: 222 MPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNL 281 M + S +VA + + E R+++ L+ E TRV +++++ +L Sbjct: 148 MSIIESYGLVAVVEGGVIRVMSVEDLRRQVERQGLYLEEEHVSPLQTRVVPVRFSEPASL 207 Query: 282 VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 E LT + + K+ ++T D T SLVI E+L + + + Sbjct: 208 AESLTPMLSRDKE------------GNPRGSVTVDRHTRSLVIRDTAENLERLTSFLQEV 255 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 D QVL+EA I+E LGVQW + G Q+ ++ A G Y+ Sbjct: 256 DQATPQVLIEAHIIETNQEVARELGVQWGSFWRGQQRVSD--------AAGGFTYQAGNP 307 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 I + A + L AL K +IL+ PS+ TLDN A G Sbjct: 308 IGEQYSLDVLTGEVGFYTASVAGNILEMQLQALQREGKVNILSRPSVATLDNHEAVLESG 367 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST 521 +VP S T +V+ K +L VTPQV + + L+IE + VD + Sbjct: 368 TEVPYQSIEDGT------TSVQYKDAVLRLLVTPQVISRENIKLKIEAQKDEVDLTRTVM 421 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 P + Q ++V+ G TVV+ GL + + VPLL +IP +G FR + Sbjct: 422 GNPFIIKKLAQTNLIVEDGSTVVIAGLAKERQASSSTGVPLLKNIPGLGVFFRSDARAGE 481 Query: 582 KRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQR 618 L++FI P I+ D+ L Y + R+ R Sbjct: 482 FEELLIFITPRILSADN----LENRDYGQLRELPSLR 514 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 67/166 (40%), Gaps = 9/166 (5%) Query: 29 GANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGY 88 N + I + + + + I+I+PSV G +++ Q + F+SI++ YG Sbjct: 101 SINLVDVPIGTAMRSLARVAQQNIIINPSVTGNVNIH----VEQVPWNDVFMSIIESYGL 156 Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 + ++ G ++V+ +++ L TR+VP+ LA L M+ Sbjct: 157 VAV-VEGGVIRVMSVEDLRRQVERQGLYLEEEHVSPLQTRVVPVRFSEPASLAESLTPML 215 Query: 149 DAGSVGN----VVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 GN V + L++ A + +L ++ VD + Sbjct: 216 SRDKEGNPRGSVTVDRHTRSLVIRDTAENLERLTSFLQEVDQATPQ 261 >UniRef50_C1DU75 PilQ n=3 Tax=Sulfurihydrogenibium RepID=C1DU75_SULAA Length = 604 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 121/623 (19%), Positives = 231/623 (37%), Gaps = 46/623 (7%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK + L+ + P + E+ NNA + V+ + Q I+ D Sbjct: 1 MKKVKNSLLALVIGSVTPLSLSF-AEKVSIELNNAKLSTVVDAISQVSSINIIWDKDAIA 59 Query: 61 T----ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS 116 + V + ++ IL G + + + + + P + + Sbjct: 60 QKDKLVYVSIKKPYDAEKLLNL---ILVENGLIAVREGDVYKIRLSDEYFVSIPPEVIKT 116 Query: 117 SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVL----ILTGRAS 172 + DE+V I +N + L D + + + NV I++ Sbjct: 117 LGKDIFDEIVLTI--KKNASSSALIEA-----DRNTYTVYLKDKKDNVYKIKNIVSAYLD 169 Query: 173 TINKLIEVIKRV-DVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIV 231 T+ K E I ++ G ++ ++ Y + + + + + + I G+ + Sbjct: 170 TLKKQTEEIAKLQKEQGQFVKKEFNISYENYKLIEDKIIENIGP-FGRYNYDKEKGILTI 228 Query: 232 ADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRV------------YYLKYAKAT 279 D + N L I+ + K E G + K +A Sbjct: 229 LDTKDNILNITRVIGKATKEKIETKCFYARGLEPGEIIMNIKENYLSENGTVIFKSKEAL 288 Query: 280 NLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIA 339 + T + + S + IT+ + + IT + EK+ + Sbjct: 289 EIGGTETRQLSTTGGTQTGIAGLTKSTSQPATIITSLPK---ICITDKPDIIEKIKYRFS 345 Query: 340 R--LDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 LD Q+ +EA IV++ N +LG+QW + N+ +A+Y+ Sbjct: 346 DYLLDRP-YQISIEARIVQISSKNVKDLGIQWGGLASNIDNNNTKIIAGTNSTSYLANYR 404 Query: 398 KNGGITSANPAWDMFSAYNGMAAGFFNGD----WGVLLTALASNNKNDILATPSIVTLDN 453 PA G + GF G + L+AL S K+ IL+ PS++T+D Sbjct: 405 PGSAYAVDFPAVQS-KIPGGFSLGFILGGTQNFLDIRLSALQSIGKSKILSKPSVITIDG 463 Query: 454 KLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS 513 + A + G ++P + +G ++V K KL VTP+ +++++ Sbjct: 464 ETAEISQGYEIPYTTA--VAAGGGTVSSVSFKKAVLKLNVTPRTTADGNIIMDLIITQDI 521 Query: 514 VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLF 573 D + P T+T+ + V+ K G VV+GG+L+ Q S VP L +IP++G LF Sbjct: 522 PDFKNLLLGNPPIQTKTVTSKVVAKDGSVVVIGGILEKTEDTQTSGVPGLMNIPILGNLF 581 Query: 574 RYTSTERAKRNLMVFIRPTIIRD 596 + + L++F+ P I+ + Sbjct: 582 KENFKQDTSTELLIFLSPKIVYE 604 >UniRef50_A5WCG3 Type IV pilus secretin PilQ n=2 Tax=Bacteria RepID=A5WCG3_PSYWF Length = 642 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 94/464 (20%), Positives = 179/464 (38%), Gaps = 74/464 (15%) Query: 179 EVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS 238 ++ V G+ ++++ + A D+ QL ++ G N Sbjct: 204 NIVATDQVTGSLMLNLVNVPWDQALDIILTSQQLGKQTQG------------------NV 245 Query: 239 LIISG-PEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK---- 293 ++++ + A+QR L + + L YAKA +L ++ S Sbjct: 246 ILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKAEDLQALIIKASGSPTPTPV 305 Query: 294 ------DEKGNARKPS--------------SSGAMDNVAITADEQTNSLVITADQSVQEK 333 A PS S I D +TN+L+I Sbjct: 306 AMQHLPASTAVANAPSALPAVVTRLNLPVSSRLLSSRGVIAVDARTNTLIIKDTADSLSN 365 Query: 334 LATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGV 393 + +I ++DI QV++E +V D +GV+W + G N L + + Q + Sbjct: 366 IHALIKQIDIPVRQVMIEVRMVSATDNFSKEMGVKWGLLSKGVAH--NDDLLVGASDQTL 423 Query: 394 ADYKKNGGITSA-------------------NPAWDMFSAYNGMAAGFFNGD---WGVLL 431 AD K +A N + + +A G + + L Sbjct: 424 ADLKSFSAPNTAYKGRNKSRAGYAITRPDNLNVDLGISNPAGRIAFGLLSMSDLMIDLEL 483 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKL 491 +A+ + + ++++TP I+TLD + A+ + G +P S S+ T + + L Sbjct: 484 SAMQAEGRGEVISTPKILTLDKQTATVSSGTKIPYQSESEGGG-----TTTQFEEALLSL 538 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDD 551 +VTP + D + L++ E + N + +T + V V G+T+VLGG+ + Sbjct: 539 QVTPSITPEDKISLQLNIENGRPNPVGNGVI--LIDTDRLITRVTVGDGQTLVLGGIYRN 596 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 KVP GD+P +G+LF+ ++ L++F+ P +++ Sbjct: 597 QIFNNTQKVPFFGDLPYIGRLFKQDLRRNDQQELLIFVTPKLMQ 640 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 67/221 (30%), Gaps = 46/221 (20%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + +F ++R + ++ Q I+ V G++ + + + IL Sbjct: 177 SGKPISVDFQQVEVRSVLHLLSQFTDTNIVATDQVTGSLMLNLVN-VPWDQALDI---IL 232 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 T N L + K +A + L + + L A DL L Sbjct: 233 TSQQLGKQTQGNVILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKAEDLQAL 292 Query: 144 L--------------------------------------RQMMDA--GSVGNVVHYEPSN 163 + + S G + +N Sbjct: 293 IIKASGSPTPTPVAMQHLPASTAVANAPSALPAVVTRLNLPVSSRLLSSRGVIAVDARTN 352 Query: 164 VLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 LI+ A +++ + +IK++D+ +Q +I + SA D Sbjct: 353 TLIIKDTADSLSNIHALIKQIDIP--VRQVMIEVRMVSATD 391 >UniRef50_C8QE32 Type IV pilus secretin PilQ n=1 Tax=Pantoea sp. At-9b RepID=C8QE32_9ENTR Length = 421 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 75/309 (24%), Positives = 140/309 (45%), Gaps = 24/309 (7%) Query: 291 KLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 + + + S ++T D +TNSL++ ++ + LD+ QV + Sbjct: 128 ANAGDAARSLQAERSLMTPRGSVTVDSRTNSLLLRDTPRALQETVRWLNALDLPLEQVEL 187 Query: 351 EAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWD 410 A IV + + + LGV W P Q + + + + +NPA+ Sbjct: 188 SAHIVTISEEHLRELGVNWGLS------------PAEEVMQTLRNPQLAIPLAVSNPAFR 235 Query: 411 MFSAYNGMAAGFFNGDW-GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 M G+ G GD + L+AL ++ DI+A+P + T + A+ G ++P Sbjct: 236 M-----GVTLGHIGGDLLNLELSALEQESQIDIIASPRLFTSHQQTATIKQGTEIPY--- 287 Query: 470 SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST--LGPTFN 527 + SG++ +E K ++VTP V + L++ + S N+ + + Sbjct: 288 -EVKSGNSGATAIEFKEAVLGMEVTPVVLGNGRIQLKLRLSQNMPGRSINTGEHQTLSID 346 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 + I V ++ GET+ LGG+ + ++VP LG +P+VG LFR+ + E K+ L++ Sbjct: 347 KQEIDTQVTLRDGETLALGGIFQQQRAQNENRVPWLGKLPVVGNLFRHQTDEHKKKELVI 406 Query: 588 FIRPTIIRD 596 FI P ++R+ Sbjct: 407 FITPRLVRE 415 Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 9/187 (4%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 + ++ LL L + HA ++ F++ + ++ + + +LI P V+G +S Sbjct: 1 MPRMKVWLLLFLGLSAPLHASEQRLSLVFDDTPVENILQALADYQQTNLLIAPGVEGRLS 60 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 +R D E+ + + L SV+ + L S + + A+ Sbjct: 61 LRLEDI----EWQRALALVARLARLSVVQEEGVLLIYPESWQQWQAQKIQAEREEQQQQI 116 Query: 124 ELVTRIVPLENVPARDLAPLL---RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 L + V A D A L R +M G+V +N L+L + + + Sbjct: 117 ALTQQTVTFHYANAGDAARSLQAERSLMTP--RGSVTVDSRTNSLLLRDTPRALQETVRW 174 Query: 181 IKRVDVI 187 + +D+ Sbjct: 175 LNALDLP 181 >UniRef50_B9XBV8 Type II and III secretion system protein n=1 Tax=bacterium Ellin514 RepID=B9XBV8_9BACT Length = 612 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 116/383 (30%), Positives = 171/383 (44%), Gaps = 42/383 (10%) Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 N I+ P RIT D E TRV LKYA TN+V +TGV + + Sbjct: 200 NLTIVDDPRTKIARITV----KDPAAPEPLVTRVIQLKYANVTNIVLNVTGVLQDKRS-- 253 Query: 297 GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 + AD +T+ LV+ A + ++A+LD QVL+EA +VE Sbjct: 254 ---------------RVAADVRTSQLVVLATDRELTAVDELVAKLDTATKQVLIEARLVE 298 Query: 357 VQDGNGLNLGVQW-----------ANKNVGAQQFTNTGLPIFNAAQGVADYKK-NGGITS 404 GV W N ++ A FT P G D + I Sbjct: 299 TSKNPTTAKGVDWTGTAAAQNVRFGNNSILAAPFTRGTPPTPANPFGTPDQQAVPSTILD 358 Query: 405 ANPAWDMFSAYNGMAAGFFNGDW---GVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 + +NG F + +L+ L ++N +L+TP VTLDN+ A+ +V Sbjct: 359 PTQPMIAANTHNGFLPNTFFLNADGASAVLSFLNTDNDAQVLSTPRAVTLDNETATLSVT 418 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS----- 516 + P+ + T G + V VGT LKVTP+++ + L + EVSSV Sbjct: 419 RAQPIFKTTAGTQGSPGGSEVTYTNVGTILKVTPRISANKMISLRVIPEVSSVAGTDRKI 478 Query: 517 -SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRY 575 S F+ R I VL+ +G T+V+GGL+ D + KVPLLGDIP +G FR+ Sbjct: 479 VSGQINEADIFDVRHIDTQVLIPSGNTLVMGGLVSDDRTKSYIKVPLLGDIPYLGAAFRH 538 Query: 576 TSTERAKRNLMVFIRPTIIRDDD 598 S + K+NL++F+ PTI+ +D Sbjct: 539 ESKTQNKKNLIIFVTPTIVETED 561 Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 20/171 (11%), Positives = 58/171 (33%), Gaps = 29/171 (16%) Query: 32 FNNADIRQFVEIVGQHLGKTILIDPSVQ-------GTISVRSNDTF-----SQQEYYQFF 79 + + ++ + + G ++DP + G ++ Q Sbjct: 136 MDEVPLTDAIKNLARQAGLNYMLDPKINYGVAGPDGKLN---PQPMVSLRWENLTADQAL 192 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 ++L Y +++ D+ K+ R P + LVTR++ L+ + Sbjct: 193 NAVLGNYNLTIV--DDPRTKIAR-----------ITVKDPAAPEPLVTRVIQLKYANVTN 239 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 + + ++ V ++ L++ + + E++ ++D + Sbjct: 240 IVLNVTGVL-QDKRSRVAADVRTSQLVVLATDRELTAVDELVAKLDTATKQ 289 >UniRef50_C9LRH4 Putative secretin and TonB short domain protein n=2 Tax=Selenomonas RepID=C9LRH4_9FIRM Length = 462 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 99/436 (22%), Positives = 166/436 (38%), Gaps = 29/436 (6%) Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKI------VADKRTNSLIISGPEKAR 248 + LE A D+ +L + S + + +I V + LI A Sbjct: 42 LTLEVVDA-DVTALLTSIARLSGLDLILDDSVKGRISLSLKDVEPEEALMLISRAKGLAV 100 Query: 249 Q-RITSLLKSLDVEESEEGNTRVYYLKYAK------ATNLVEVLTGVSEKLKDEK-GNAR 300 Q LL E + V + +A A L G+S +++K G Sbjct: 101 QHEGKVLLVRAAKEAAPFYRMHVLPVHHADLDTAFAAVKLSLGEAGISAIDENKKNGKED 160 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 + D TN+L+ + + + V+ LD+ QV +EA +V ++ Sbjct: 161 ISEQGLYRTGERLLIDRATNALLFYGTEEEKARAEAVLHSLDVPTEQVSLEARVVALEKN 220 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 LGV W + + + +G+ P + Y Sbjct: 221 AAKELGVDWDWSPLPIDPHGTSKSGAEGSRRGIDGEVPGVIRFGRTPEGKPYEFY----- 275 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN 480 + + AL ++ K ++LA P+I TL + A N+G VPV T S Sbjct: 276 ------YRAKIAALITDGKANVLARPNITTLQGREAVINIGGSVPVPETQTTNSTVTTSI 329 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTG 540 T K G L+ TP+++E + + EVSS ++ F R+ V +K G Sbjct: 330 T--YKKAGIILRYTPRIHENGEITARVHTEVSSPVY-VDALKAYKFQERSADTTVRLKDG 386 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 ET+V+GGL+ +KVPLLGDIP++G F+ + +M+F+ I+RD Sbjct: 387 ETMVIGGLIGSEESRVFAKVPLLGDIPILGTFFKSVRRTKTDSEIMIFLTAHILRDTSPP 446 Query: 601 RSLSKEKYTRYRQEQQ 616 + E + + Q Sbjct: 447 AEGTAESERKGKDVWQ 462 Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 69/229 (30%), Gaps = 46/229 (20%) Query: 3 GLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTI 62 G++ A A A +AD+ + + + G +++D SV+G I Sbjct: 17 GISPRVGAFFLAAWFAGALPAAASPLTLEVVDADVTALLTSIARLSGLDLILDDSVKGRI 76 Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG 122 S+ S +E G + + + L V + Sbjct: 77 SL-SLKDVEPEEALMLIS---RAKGLA-VQHEGKVLLVRAAKEAAPF------------- 118 Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNV-----------------------VHY 159 ++P+ + ++ + + + + Sbjct: 119 --YRMHVLPVHHADLDTAFAAVKLSLGEAGISAIDENKKNGKEDISEQGLYRTGERLLID 176 Query: 160 EPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQQIIHLEYASAEDL 205 +N L+ G + V+ +DV + + +++ LE +A++L Sbjct: 177 RATNALLFYGTEEEKARAEAVLHSLDVPTEQVSLEARVVALEKNAAKEL 225 >UniRef50_Q3JLH6 Type III secretion outer membrane pore, YscC/HrcC family n=35 Tax=Burkholderia RepID=Q3JLH6_BURP1 Length = 630 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 121/621 (19%), Positives = 221/621 (35%), Gaps = 67/621 (10%) Query: 4 LNKITCCLLAALLMPCAGHAENEQY-----GANFNNADIRQFVEIVGQHLGKTILIDPSV 58 L C + + A +A ++ D++ + G I +V Sbjct: 49 LCAAWCVAIFGTIGIGAANAMPVRWRSTVVHVVLEGKDLKDVLRDFAASQGVATSIAGNV 108 Query: 59 QGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSR 118 QGT++ R + S Q + + +G+ V D L + + + Sbjct: 109 QGTVTGRFD--LSPQRFLDTLAAT---FGF-VWFYDGNILSITNAND------------- 149 Query: 119 PGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLI 178 + +++PL++ +L LRQ+ + + E S ++++G A + + Sbjct: 150 ------MTRQVLPLDHASIGELRSALRQIGMDDKRFPIFYDEVSGTVLVSGPAQYVQIVT 203 Query: 179 EVIKRVDVIGTEK----QQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADK 234 ++ +R+D + + +I L++A A D ++ G + ++ + Sbjct: 204 DIAQRLDTLSGRRNGSTIRIFKLKHAWAADRNVQID-------GNTVTMPGIATVLANLY 256 Query: 235 RTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKY----------AKATNLVEV 284 R +G A + + DV S G R+ A A Sbjct: 257 RVRGRAGTGQSSAAPGVQRVQPMGDVSGSAYGGNRLMPPLPPSMMGGGRGDAFAKGASID 316 Query: 285 LTGVSEKLKDEKGNARKPSSSGAMDNVAIT-ADEQTNSLVITADQSVQEKLATVIARLDI 343 G R +S D + I D TNS++I + A +I +LDI Sbjct: 317 GESGGAASAAPGGAPRTEEASAERDELPIIQPDPMTNSVLIRDLPDRLAQYAPLIQQLDI 376 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT 403 R + ++A I+E+ + +GV W N T TG N G G T Sbjct: 377 RPRLIEIQAHIMEIDNDLLREIGVDWRAHNSHGDIQTGTGNTAQNDYSG-GQINPFFGTT 435 Query: 404 SANPAWDMFSAYNGMAAGFFNGD----WGVLLTALASNNKNDILATPSIVTLDNKLASFN 459 + + +A G++ GD ++AL S +K I A+P + TLDN A + Sbjct: 436 TLAGNAVVNAAPAGVSVTAVVGDAARHLMARVSALQSTSKVKIDASPLVATLDNSEAVMD 495 Query: 460 VGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGD---AVLLEIEQEVSSVDS 516 V ++ +T G L+V P + + + + + + Sbjct: 496 NTTRFFVKVSGYASAELYSVST------GVSLRVLPMIVQDGSETRIKMNVHVTDGQLTG 549 Query: 517 SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYT 576 L P + I V G+++++ G D V+ VP L IPL+G LFRY Sbjct: 550 DQVDNL-PVITSSEINTQAFVGQGQSLLIAGYSTDKRANGVAGVPWLSKIPLLGALFRYH 608 Query: 577 STERAKRNLMVFIRPTIIRDD 597 S + + + P II Sbjct: 609 SDSQNHMERVFLLSPRIIDPG 629 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citroba... 539 e-151 UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gam... 530 e-149 UniRef50_C4L998 General secretion pathway protein D n=2 Tax=Bact... 519 e-145 UniRef50_P31701 General secretion pathway protein D n=27 Tax=Ent... 503 e-141 UniRef50_P31700 General secretion pathway protein D n=5 Tax=Ente... 502 e-140 UniRef50_A8A4B9 General secretion pathway protein D n=30 Tax=Esc... 500 e-140 UniRef50_A8GJQ5 General secretion pathway protein D n=6 Tax=Ente... 494 e-138 UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified... 491 e-137 UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamm... 489 e-136 UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desu... 487 e-136 UniRef50_C4UIB8 General secretion pathway protein D n=4 Tax=Yers... 486 e-135 UniRef50_P45779 General secretion pathway protein D n=102 Tax=Pr... 486 e-135 UniRef50_A1WZM1 General secretion pathway protein D n=1 Tax=Halo... 483 e-134 UniRef50_A1JPH4 General secretion pathway protein D n=28 Tax=Yer... 480 e-134 UniRef50_Q0A5Z6 General secretion pathway protein D n=2 Tax=Ecto... 478 e-133 UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Side... 475 e-132 UniRef50_Q0VSG7 General (Type II) secretion pathway protein D n=... 474 e-132 UniRef50_C7R8G0 General secretion pathway protein D n=1 Tax=Kang... 473 e-132 UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax... 469 e-130 UniRef50_Q8VPC8 Hypothetical type II secretion protein n=6 Tax=E... 466 e-129 UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Arom... 466 e-129 UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desu... 464 e-129 UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cell... 463 e-129 UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Mari... 461 e-128 UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gamm... 461 e-128 UniRef50_A8ZWZ5 General secretion pathway protein D n=2 Tax=Desu... 457 e-127 UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acineto... 457 e-127 UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Pro... 457 e-127 UniRef50_A1U289 General secretion pathway protein D n=4 Tax=Gamm... 457 e-127 UniRef50_C7HZF2 General secretion pathway protein D n=1 Tax=Thio... 456 e-126 UniRef50_Q1N1M8 Type II secretory pathway, component PulD n=1 Ta... 452 e-125 UniRef50_A4BES0 Type II secretory pathway, component PulD n=1 Ta... 452 e-125 UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gamm... 452 e-125 UniRef50_Q221L0 Type II and III secretion system protein n=1 Tax... 451 e-125 UniRef50_Q48JN3 General secretion pathway protein GspD n=2 Tax=P... 451 e-125 UniRef50_B3R7X2 General Secretory Pathway protein D, type II sec... 449 e-124 UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 T... 447 e-124 UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax... 445 e-123 UniRef50_D0KWK8 General secretion pathway protein D n=1 Tax=Halo... 444 e-123 UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desu... 442 e-122 UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pse... 441 e-122 UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax... 437 e-121 UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax... 436 e-120 UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burk... 435 e-120 UniRef50_Q2Y7S4 Type II and III secretion system protein n=1 Tax... 433 e-119 UniRef50_B1JDL3 General secretion pathway protein D n=6 Tax=Pseu... 432 e-119 UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyph... 431 e-119 UniRef50_B3E7M1 General secretion pathway protein D n=8 Tax=Geob... 429 e-118 UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphi... 428 e-118 UniRef50_C4K9Q5 General secretion pathway protein D n=1 Tax=Thau... 426 e-117 UniRef50_Q7NRG7 Probable type II secretion system protein n=1 Ta... 426 e-117 UniRef50_B8GXR3 Type II secretion pathway protein D n=3 Tax=Caul... 423 e-116 UniRef50_Q1JVV5 Type II and III secretion system protein n=1 Tax... 422 e-116 UniRef50_Q1YQU4 Putative general secretion pathway protein n=1 T... 418 e-115 UniRef50_C6XJ47 General secretion pathway protein D n=1 Tax=Hirs... 417 e-115 UniRef50_Q6MMM9 General secretion pathway protein D n=1 Tax=Bdel... 414 e-114 UniRef50_C5CPK3 General secretion pathway protein D n=1 Tax=Vari... 413 e-114 UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n... 413 e-113 UniRef50_C1SHL2 General secretion pathway protein D n=1 Tax=Deni... 411 e-113 UniRef50_D0XKD9 General secretion pathway protein D n=1 Tax=Brev... 409 e-112 UniRef50_C5S7Y5 General secretion pathway protein D n=1 Tax=Allo... 407 e-112 UniRef50_A3W186 General secretion pathway protein D n=1 Tax=Rose... 406 e-111 UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyph... 405 e-111 UniRef50_A0YBF4 Type II and III secretion system protein n=1 Tax... 404 e-111 UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D prot... 404 e-111 UniRef50_Q1D9E0 General secretion pathway protein D n=2 Tax=Cyst... 403 e-110 UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseu... 402 e-110 UniRef50_O67320 General secretion pathway protein D n=1 Tax=Aqui... 402 e-110 UniRef50_A8UQX4 General secretion pathway protein D n=1 Tax=Hydr... 401 e-110 UniRef50_C6CIN5 General secretion pathway protein D n=1 Tax=Dick... 400 e-110 UniRef50_C8PXJ4 General secretion pathway protein D n=1 Tax=Enhy... 400 e-110 UniRef50_Q4UYQ6 Type II secretion system protein D n=6 Tax=Prote... 399 e-109 UniRef50_B7RHZ1 General secretion pathway protein D n=1 Tax=Rose... 396 e-108 UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhiz... 396 e-108 UniRef50_C6BTY5 General secretion pathway protein D n=1 Tax=Desu... 395 e-108 UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobiu... 394 e-108 UniRef50_A3SDT6 General secretion pathway protein D n=1 Tax=Sulf... 390 e-107 UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Synt... 389 e-106 UniRef50_C0QPL4 General secretion pathway protein D n=1 Tax=Pers... 389 e-106 UniRef50_A3VSK1 General secretion pathway protein D n=1 Tax=Parv... 385 e-105 UniRef50_Q2G4Y4 Type II and III secretion system protein n=3 Tax... 385 e-105 UniRef50_A9GDS2 General secretion pahtway protein D n=1 Tax=Sora... 384 e-105 UniRef50_A6Q682 Type II secretion system protein D n=1 Tax=Sulfu... 384 e-105 UniRef50_Q5ZVW8 Type II protein secretion LspD n=7 Tax=Legionell... 384 e-105 UniRef50_C0QK68 GspD2 n=1 Tax=Desulfobacterium autotrophicum HRM... 383 e-104 UniRef50_C0GQP0 General secretion pathway protein D n=1 Tax=Desu... 381 e-104 UniRef50_C1TK46 General secretion pathway protein D n=1 Tax=Deth... 372 e-101 UniRef50_B4UDG8 General secretion pathway protein D n=4 Tax=Anae... 369 e-100 UniRef50_Q82WH1 General (Type II) secretion pathway (GSP) D prot... 367 e-100 UniRef50_D0LLW3 General secretion pathway protein D n=1 Tax=Hali... 367 e-100 UniRef50_B7S1V0 General secretion pathway protein D n=1 Tax=mari... 366 1e-99 UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Mari... 360 1e-97 UniRef50_B4U6K2 General secretion pathway protein D n=1 Tax=Hydr... 358 4e-97 UniRef50_A7IH57 General secretion pathway protein D n=1 Tax=Xant... 358 5e-97 UniRef50_D0X4T6 Putative uncharacterized protein n=1 Tax=Vibrio ... 355 2e-96 UniRef50_B9L741 Putative GspD n=1 Tax=Nautilia profundicola AmH ... 355 3e-96 UniRef50_A6DDM8 Type II and III secretion system protein:NolW-li... 354 8e-96 UniRef50_B0T7N8 General secretion pathway protein D n=1 Tax=Caul... 352 3e-95 UniRef50_A7BV51 Bacterial type II and III secretion system prote... 352 3e-95 UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Synt... 349 2e-94 UniRef50_B0BAC9 Type III secretion structural protein (Outer mem... 346 2e-93 UniRef50_C5SIE2 Type II and III secretion system protein n=1 Tax... 344 5e-93 UniRef50_Q1YMS0 Putative general secretion pathway (GSP) protein... 344 6e-93 UniRef50_A4SKW4 S-protein secretion component D n=2 Tax=Gammapro... 343 2e-92 UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobaci... 342 3e-92 UniRef50_C1DRT4 General secretion pathway protein D n=2 Tax=Gamm... 342 3e-92 UniRef50_B9XM19 Type II and III secretion system protein n=1 Tax... 342 3e-92 UniRef50_Q89HG9 Blr6022 protein n=3 Tax=Bradyrhizobium RepID=Q89... 336 1e-90 UniRef50_C1A7C5 Putative general secretion pathway protein D n=1... 335 3e-90 UniRef50_Q04SX5 Type II secretory pathway component, protein D n... 334 8e-90 UniRef50_A6FZI7 Type II and III secretion system protein n=1 Tax... 333 1e-89 UniRef50_B1ZUM2 Type II and III secretion system protein n=1 Tax... 333 1e-89 UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Bur... 332 2e-89 UniRef50_C6C305 General secretion pathway protein D n=1 Tax=Dick... 332 4e-89 UniRef50_B6QWW0 General (Type II) secretion pathway (GSP) D prot... 330 1e-88 UniRef50_Q0BZ85 Type II secretion system protein n=1 Tax=Hyphomo... 329 2e-88 UniRef50_D0HB85 S-protein secretion component D n=1 Tax=Vibrio m... 328 3e-88 UniRef50_A6DJN7 Secretion protein XqhA n=1 Tax=Lentisphaera aran... 328 4e-88 UniRef50_Q3JD22 General secretion pathway protein D n=2 Tax=Nitr... 328 5e-88 UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax... 327 1e-87 UniRef50_B5JLH7 Bacterial type II and III secretion system prote... 325 3e-87 UniRef50_Q15QU6 Type II and III secretion system protein n=1 Tax... 325 5e-87 UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative ... 324 8e-87 UniRef50_A4C8H8 General (Type II) secretion pathway (GSP) D prot... 322 2e-86 UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-li... 322 2e-86 UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadace... 321 5e-86 UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=... 319 2e-85 UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobac... 318 3e-85 UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Meth... 318 5e-85 UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 318 6e-85 UniRef50_A4A016 General secretion pathway protein D (Precursor) ... 317 6e-85 UniRef50_Q21H82 Type II and III secretion system protein n=11 Ta... 316 2e-84 UniRef50_A8FXQ1 Type II secretory pathway component PulD-like pr... 316 2e-84 UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammapro... 315 3e-84 UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas in... 315 4e-84 UniRef50_A3UDE6 General secretion proteinD n=1 Tax=Oceanicaulis ... 315 4e-84 UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Coma... 315 4e-84 UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Pr... 314 8e-84 UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Coma... 314 9e-84 UniRef50_D1N173 Type II and III secretion system protein n=1 Tax... 313 1e-83 UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas... 313 2e-83 UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteob... 313 2e-83 UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular or... 312 2e-83 UniRef50_A3UH04 General (Type II) secretion pathway (GSP) D prot... 312 3e-83 UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteo... 312 3e-83 UniRef50_B8D2D9 Type II and III secretion system protein n=1 Tax... 311 4e-83 UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Ta... 310 9e-83 UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisser... 310 1e-82 UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella ... 310 1e-82 UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fast... 310 2e-82 UniRef50_B8IR79 General secretion pathway protein D n=2 Tax=Meth... 309 2e-82 UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legi... 309 3e-82 UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderi... 308 3e-82 UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella ko... 308 4e-82 UniRef50_C5B3Y6 Putative General secretion protein D n=1 Tax=Met... 308 5e-82 UniRef50_B2IBK3 General secretion pathway protein D n=2 Tax=Beij... 307 8e-82 UniRef50_B8GPV1 Type IV pilus secretin PilQ n=5 Tax=Chromatiales... 306 1e-81 UniRef50_B8E238 Type II and III secretion system protein n=1 Tax... 306 2e-81 UniRef50_A7BUG3 Bacterial type II and III secretion system prote... 305 3e-81 UniRef50_Q39X07 Type II and III secretion system protein:NolW-li... 305 3e-81 UniRef50_Q60BY4 Fimbrial assembly protein PilQ n=1 Tax=Methyloco... 305 5e-81 UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein ... 304 6e-81 UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 T... 304 9e-81 UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gamm... 304 9e-81 UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=A... 303 2e-80 UniRef50_D2QZD1 Type II and III secretion system protein n=1 Tax... 303 2e-80 UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromati... 303 2e-80 UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter Re... 302 3e-80 UniRef50_UPI0001744674 general secretion pathway protein D n=1 T... 302 3e-80 UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=ce... 302 3e-80 UniRef50_B5YDZ7 Bacterial type II and III secretion system prote... 301 5e-80 UniRef50_Q07N78 General secretion pathway protein D n=1 Tax=Rhod... 301 5e-80 UniRef50_C6Q9T0 General secretion pathway protein D n=1 Tax=Hyph... 301 5e-80 UniRef50_A6CD16 General secretion pathway protein D (Precursor) ... 301 6e-80 UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein ... 301 6e-80 UniRef50_Q1K2X4 Type II and III secretion system protein n=1 Tax... 300 1e-79 UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vi... 299 2e-79 UniRef50_Q0VMB7 Fimbrial assembly protein pilQ n=3 Tax=Gammaprot... 299 2e-79 UniRef50_D0SET7 Type IV pilus biogenesis and competence protein ... 299 2e-79 UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS 299 3e-79 UniRef50_Q212Y1 Type II and III secretion system protein n=5 Tax... 298 6e-79 UniRef50_C0QUI7 Fimbrial assembly protein PilQ n=1 Tax=Persephon... 297 8e-79 UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter Re... 297 1e-78 UniRef50_A4A5L7 General secretion (Type II) pathway protein D n=... 296 2e-78 UniRef50_Q3JLH6 Type III secretion outer membrane pore, YscC/Hrc... 296 2e-78 UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter... 296 2e-78 UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae Re... 296 2e-78 UniRef50_C0AE16 Type II and III secretion system protein n=1 Tax... 295 5e-78 UniRef50_C1DU75 PilQ n=3 Tax=Sulfurihydrogenibium RepID=C1DU75_S... 294 7e-78 UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans... 294 8e-78 UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 293 1e-77 UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadac... 293 1e-77 UniRef50_P29041 General secretion pathway protein D n=22 Tax=Xan... 292 3e-77 UniRef50_Q0BR89 General secretion pathway protein D n=1 Tax=Gran... 292 3e-77 UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax... 291 4e-77 UniRef50_B6WRK6 Putative uncharacterized protein n=1 Tax=Desulfo... 291 5e-77 UniRef50_B8ESI9 General secretion pathway protein D n=1 Tax=Meth... 291 8e-77 UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lo... 290 9e-77 UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnic... 290 1e-76 UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Bu... 290 1e-76 UniRef50_A0B1R2 Type III secretion outer membrane pore, YscC/Hrc... 288 4e-76 UniRef50_A1WFQ3 General secretion pathway protein D n=1 Tax=Verm... 288 4e-76 UniRef50_B8KPH7 General secretion pathway protein D n=1 Tax=gamm... 288 4e-76 UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax... 288 6e-76 UniRef50_Q5P5P1 Fimbrial type-IV assembly protein PilQ n=4 Tax=B... 287 8e-76 UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax... 287 8e-76 UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 287 9e-76 UniRef50_A8UYL2 Putative uncharacterized protein n=1 Tax=Hydroge... 287 1e-75 UniRef50_Q9I3W2 Probable type II secretion system protein n=1 Ta... 286 1e-75 UniRef50_A0LPH6 General secretion pathway protein D n=1 Tax=Synt... 286 2e-75 UniRef50_Q1Q8Q7 Type II and III secretion system protein n=5 Tax... 286 2e-75 UniRef50_B0UFJ1 General secretion pathway protein D n=4 Tax=Meth... 285 3e-75 UniRef50_Q0AF45 Type IV pilus secretin PilQ n=3 Tax=Nitrosomonas... 285 3e-75 UniRef50_C1ZGU1 Type II secretory pathway, component PulD n=1 Ta... 285 4e-75 UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD 285 4e-75 UniRef50_D2L502 Type II and III secretion system protein n=1 Tax... 285 4e-75 UniRef50_A9H699 General secretion pathway protein D n=3 Tax=cell... 284 7e-75 UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thio... 283 1e-74 UniRef50_B1J2J3 Type IV pilus secretin PilQ n=5 Tax=Pseudomonas ... 283 1e-74 UniRef50_A1U3Z5 Type II and III secretion system protein n=1 Tax... 283 2e-74 UniRef50_A8ZSX5 Type IV pilus secretin PilQ n=1 Tax=Desulfococcu... 283 2e-74 UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxoba... 282 3e-74 UniRef50_A6GPK2 Pili assembly protein PilQ n=1 Tax=Limnobacter s... 281 8e-74 UniRef50_A0P0N8 General secretion proteinD n=1 Tax=Labrenzia agg... 280 1e-73 UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae Rep... 280 1e-73 UniRef50_Q0EXA5 Probable pilQ; fimbrial type-4 assembly signal p... 280 2e-73 UniRef50_A9GGP4 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 279 2e-73 UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragme... 279 2e-73 UniRef50_Q7UHD1 General secretion pathway protein D (OutD) n=1 T... 278 4e-73 UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Ta... 278 4e-73 UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis... 277 9e-73 UniRef50_Q5SII6 General secretion pathway protein (PilQ) n=5 Tax... 277 1e-72 UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax... 276 2e-72 UniRef50_Q2SC13 Type II secretory pathway, component PulD n=1 Ta... 276 2e-72 UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Bur... 276 3e-72 UniRef50_B8DPS5 Type II and III secretion system protein n=4 Tax... 275 3e-72 UniRef50_D0LHN1 Type IV pilus secretin PilQ n=1 Tax=Haliangium o... 274 7e-72 UniRef50_A5WCG3 Type IV pilus secretin PilQ n=2 Tax=Bacteria Rep... 274 1e-71 UniRef50_Q47JK8 Type II and III secretion system protein:NolW-li... 273 2e-71 UniRef50_Q52498 Hypersensitivity response secretion protein hrpA... 273 2e-71 UniRef50_B3TCB2 Putative bacterial type II and III secretion sys... 272 3e-71 UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter p... 271 4e-71 UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiob... 271 5e-71 UniRef50_Q7UX59 General secretion pathway protein D [Precursor] ... 271 6e-71 UniRef50_B9Z6A5 Type II and III secretion system protein n=1 Tax... 271 8e-71 UniRef50_C7LN99 Type IV pilus secretin PilQ n=1 Tax=Desulfomicro... 270 1e-70 UniRef50_C8QE32 Type IV pilus secretin PilQ n=1 Tax=Pantoea sp. ... 270 1e-70 UniRef50_A6C2R4 Type IV pilin multimeric outer membrane protein ... 270 1e-70 UniRef50_Q6MPI6 Fimbrial assembly protein n=1 Tax=Bdellovibrio b... 269 2e-70 UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax... 269 3e-70 Sequences not found previously or not previously below threshold: >UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AIN8_CITK8 Length = 640 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 369/656 (56%), Positives = 473/656 (72%), Gaps = 27/656 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK L L + A N + A+F N DIR+F++ VG++L KTIL+DPSVQG Sbjct: 1 MKKFPWACVALTTLALYSSSLFAAN--FSASFKNTDIREFIDTVGRNLNKTILVDPSVQG 58 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 T+SVR+ + ++ EYYQFFLS+LDLYG SVI +DNG +KVVRS+ +T+ IADS PG Sbjct: 59 TVSVRTYNVLTEDEYYQFFLSVLDLYGLSVIPMDNGMVKVVRSSVARTAGTPIADSKNPG 118 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 GDE++TR+V +ENVP R+LAPLLRQ+ DA +GNVVH+EPSNVL+LTG+AS +N+L+++ Sbjct: 119 KGDEIITRVVRMENVPVRELAPLLRQLNDATGIGNVVHFEPSNVLLLTGKASVVNRLVDL 178 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 ++RVD G ++++I+ L YASA++L+++LN L +E K Q L+ K+VAD+ TNSL+ Sbjct: 179 VQRVDRSGVQRREIVPLHYASAKELSDMLNNLNNEE-QKGQNAPQLATKVVADEETNSLV 237 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 ISG E+AR R +L+ LD E++ EGNTRV+YLKYA A +V VLTG+ E++KD+ G A Sbjct: 238 ISGSEEARARTRTLIAQLDREQNNEGNTRVFYLKYANAAKVVPVLTGIGEQMKDKPGAA- 296 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 K S A ++ ITADE TNSLVITA +V L VI +LDIRR QVLVEAII EVQDG Sbjct: 297 KSKSPVAATDLNITADESTNSLVITAQPNVMNSLEKVIDKLDIRRPQVLVEAIIAEVQDG 356 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 G +LGVQW G QF TGLPI G + GMA Sbjct: 357 AGTDLGVQW-TSKHGGVQFGATGLPIGQVKNGTIKGVN----------------FTGMAT 399 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN 480 GFFNGD+G L+TAL++N KNDIL+TPS+VTLDNK ASFNVGQDVPVLSGSQTT+GDNVFN Sbjct: 400 GFFNGDFGALMTALSTNGKNDILSTPSVVTLDNKEASFNVGQDVPVLSGSQTTTGDNVFN 459 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN--STLGPTFNTRTIQNAVLVK 538 TVERKTVGTKLK+ PQ+N+GD + ++IEQEVSSVD+SS S+LGPTFNTRTI N V+V Sbjct: 460 TVERKTVGTKLKILPQINDGDMIHMKIEQEVSSVDASSTEDSSLGPTFNTRTINNEVMVH 519 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 +G+TVVLGGL+++ +K+ VSKVPLLGDIPLVGQLFRYTS + KRNLMVFI T++RDDD Sbjct: 520 SGQTVVLGGLIENVTKQNVSKVPLLGDIPLVGQLFRYTSQDTTKRNLMVFIHTTVLRDDD 579 Query: 599 VYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED---LPVLDENT-FNSHAPAPSSR 650 Y + SKEKY + R QQQR++ K ++ D LP ++ APA +SR Sbjct: 580 NYSAASKEKYDQVRARQQQRMEEKKMGILEPGDNAILPAFPSPVNTSTAAPATASR 635 >UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gammaproteobacteria RepID=GSPD_AERHY Length = 678 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 348/653 (53%), Positives = 468/653 (71%), Gaps = 15/653 (2%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 KG + AAL+M + A Y A+F NADI +F+ VG++L KTI+I+PSV+G Sbjct: 4 KGKGWRLATVAAALMMAGSAWATE--YSASFKNADIEEFINTVGKNLSKTIIIEPSVRGK 61 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 I+VRS D ++++YYQFFLS+LD+YG++V+ +DNG LKVVRS + KTS + D + PG+ Sbjct: 62 INVRSYDLLNEEQYYQFFLSVLDVYGFAVVPMDNGVLKVVRSKDAKTSAIPVVDETNPGI 121 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 GDE+VTR+VP+ NV R+LAPLLRQ+ D GNVVHY+PSNVL++TGRA+ +N+L+EV+ Sbjct: 122 GDEMVTRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYDPSNVLLITGRAAVVNRLVEVV 181 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPA-LLSAKIVADKRTNSLI 240 +RVD G ++ II L+YASA ++ ++ L + + + + LL+ K+VAD+RTNS++ Sbjct: 182 RRVDKAGDQEVDIIKLKYASAGEMVRLVTNLNKDGNSQGGNTSLLLAPKVVADERTNSVV 241 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG--- 297 +SG KAR RI +++ LD + +GNTRV+YLKY KA ++VEVL GVS ++ +K Sbjct: 242 VSGEPKARARIIQMVRQLDRDLQSQGNTRVFYLKYGKAKDMVEVLKGVSSSIEADKKGGG 301 Query: 298 --NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 +S +AI+ADE TN+LVITA V +L V+A+LDIRRAQVLVEAIIV Sbjct: 302 TATTAGGGASIGGGKLAISADETTNALVITAQPDVMAELEQVVAKLDIRRAQVLVEAIIV 361 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 E+ DG+GLNLGVQWAN N G QFTN G I + A DYK NG T + + Sbjct: 362 EIADGDGLNLGVQWANTNGGGTQFTNAGPGIGSVAIAAKDYKDNGTTTGL---AKLAENF 418 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ-TTS 474 NGMAAGF+ G+W +L+TAL++N K+DIL+TPSIVT+DNK ASFNVGQ+VPV +G+Q +TS Sbjct: 419 NGMAAGFYQGNWAMLVTALSTNTKSDILSTPSIVTMDNKEASFNVGQEVPVQTGTQNSTS 478 Query: 475 GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD--SSSNSTLGPTFNTRTIQ 532 GD F+T+ERKTVGTKL VTPQ+NEGD+VLL IEQEVSSV ++ LGPTF+TRT++ Sbjct: 479 GDTTFSTIERKTVGTKLVVTPQINEGDSVLLTIEQEVSSVGKQATGTDGLGPTFDTRTVK 538 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 NAVLVK+GETVVLGGL+D+ +KE+VSKVPLLGDIP++G LFR TS +KRNLMVFIRPT Sbjct: 539 NAVLVKSGETVVLGGLMDEQTKEEVSKVPLLGDIPVLGYLFRSTSNNTSKRNLMVFIRPT 598 Query: 593 IIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGS-EDLPVLDENTFNSHA 644 I+RD +VY +S KYT +R +Q + + A + LP ++ S Sbjct: 599 ILRDANVYSGISSNKYTLFRAQQLDAVAQEGYATSPDRQVLPEYGQDVTMSPE 651 >UniRef50_C4L998 General secretion pathway protein D n=2 Tax=Bacteria RepID=C4L998_TOLAT Length = 685 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 337/673 (50%), Positives = 467/673 (69%), Gaps = 32/673 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK K + + A +Y A+F DI++F+ VG++LGKTI++DPSV+G Sbjct: 1 MKQFLKRSLVIGCLCTQLGISPALAAEYSASFKGTDIQEFINTVGKNLGKTIIVDPSVRG 60 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 TI+VRS D ++++YYQFFLS+LD+YG++V+ + NG LKVV++ N KTS +AD +R G Sbjct: 61 TINVRSYDLLNEEQYYQFFLSVLDVYGFAVVPMPNGILKVVKAQNAKTSSIPVADETRTG 120 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 GDE+VTR+VP+ NV R+LAPLLRQ+ D GNVVHYEPSNVL+LTGRA+ +N+L+E+ Sbjct: 121 SGDEMVTRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYEPSNVLLLTGRAAVVNRLVEI 180 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 ++RVD +G E +I L+YASA ++ ++ L K+ + +L+ K+VAD+RTN+++ Sbjct: 181 VRRVDKVGDENVDVIKLKYASAGEMVRLITALTKN--DKNALTNVLTPKVVADERTNAVV 238 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 ISG + RQRI ++++ LD E+ +GNTRV+YLKYA A NLVEVL+G S+ +++EK +A Sbjct: 239 ISGENQGRQRIVTMIRQLDREQQTQGNTRVFYLKYANAKNLVEVLSGTSKTIQNEKNSAS 298 Query: 301 KPSSSGA-------------------MDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 ++ +++I ADEQTN+LVITA V ++L +IA+L Sbjct: 299 GSMTATGNTADSASSSGSGSSSSGYNGKDLSIVADEQTNALVITAQPDVMQELERIIAKL 358 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 DIRRAQVLVEAIIVE+QDG+ LN GVQWAN N G QFT TGLP A +++ +G Sbjct: 359 DIRRAQVLVEAIIVEIQDGDTLNFGVQWANTNGGGTQFTATGLPTTTVANAANEWRNDGE 418 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 ++S + S++NG+ AGF+ G+W L+TAL+SN K++ILATPSIVTLDNK A+FNVG Sbjct: 419 LSSTS--TAALSSFNGLVAGFYEGNWAGLVTALSSNTKSNILATPSIVTLDNKEAAFNVG 476 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV---------S 512 Q+VPV++GSQ+++ +V++TVERKTVGTKLKVTPQ+NEGD+VLLE+EQEV Sbjct: 477 QEVPVVTGSQSSTAGSVYSTVERKTVGTKLKVTPQINEGDSVLLEVEQEVSSVASSSSTD 536 Query: 513 SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 S SSSNS+LG TFNTRT++N+VLVK+GETVVLGGLL + + E V KVPLLGDIP++G L Sbjct: 537 SSSSSSNSSLGSTFNTRTVKNSVLVKSGETVVLGGLLSNNTSESVYKVPLLGDIPILGYL 596 Query: 573 FRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 FRY T K+NLMVFI PTI+RD Y +S KY +R EQ + + + Sbjct: 597 FRYNGTSTTKQNLMVFIHPTILRDPVTYTGVSSSKYNLFRAEQIAQDEDADSLSLPVNRP 656 Query: 633 PVLDENTFNSHAP 645 + T + +P Sbjct: 657 VLPAYGTETTLSP 669 >UniRef50_P31701 General secretion pathway protein D n=27 Tax=Enterobacteriaceae RepID=GSPD_PECCC Length = 650 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 323/635 (50%), Positives = 448/635 (70%), Gaps = 11/635 (1%) Query: 8 TCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 L ++L+ + A + ++ A+F DI++F+ V ++L KT++IDPSV GTI+VRS Sbjct: 1 MLLLSGSVLLMASSLAWSAEFSASFKGTDIQEFINTVSKNLNKTVIIDPSVSGTITVRSY 60 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 D ++++YYQFFLS+LD+YG++VI +DN LK++RS + K++ +A +PG+GDE+VT Sbjct: 61 DMMNEEQYYQFFLSVLDVYGFTVIPMDNNVLKIIRSKDAKSTSMPLATDRQPGIGDEVVT 120 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 R+VP+ NV ARD R++ D G YEP+NV+++TGRA I+ ++ +++RVD Sbjct: 121 RVVPVNNVAARDFGRSSRELNDNAWRGTCGDYEPANVVVMTGRAGVIHAVMTIVERVDQT 180 Query: 188 GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 G I L YAS+ ++ +++N+L ++ KS +P +L+A +VAD+RTNS G + Sbjct: 181 GDRNVTTIPLSYASSTEVVKMVNEL-NKMDEKSALPGMLTANVVADERTNSAAGFGEPNS 239 Query: 248 RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 RQR+ ++K LD +++ +GNT+V YLKYAKA +LVEVLTGV + ++ ++ NA Sbjct: 240 RQRVIDMVKQLDRQQAVQGNTKVIYLKYAKAADLVEVLTGVGDSIQTDQQNA----LPAL 295 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 +++I A EQTNSL++ A + L VIA+LDIRR QVLVEAII EVQD +G+NLGV Sbjct: 296 RKDISIKAHEQTNSLIVNAAPDIMRDLEQVIAQLDIRRPQVLVEAIIAEVQDADGMNLGV 355 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW 427 QWANKN G QFTNTGLPI G ++++G + +A A +NG+AAGF+ G+W Sbjct: 356 QWANKNAGVTQFTNTGLPITTMMAGADQFRRDGTLGTA--ATTALGGFNGIAAGFYQGNW 413 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTV 487 G+L+TAL+SN+KNDILATPSIVTLDN A+FNVGQ+VPVL+GSQTTSGDNVF TVERKTV Sbjct: 414 GMLMTALSSNSKNDILATPSIVTLDNMEATFNVGQEVPVLAGSQTTSGDNVFQTVERKTV 473 Query: 488 GTKLKVTPQVNEGDAVLLEIEQE---VSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVV 544 G KLKV PQ+NEGD+VLLEIEQE V+ SSS++ LG TFNTRT+ NAVLV +G+TVV Sbjct: 474 GIKLKVKPQINEGDSVLLEIEQEVSSVADAASSSSTNLGATFNTRTVNNAVLVSSGDTVV 533 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 +GGLLD + E +KVPLLGDIP++G LFR STE KRNLM+FIRP+IIRD ++S S Sbjct: 534 VGGLLDKSTNESANKVPLLGDIPVLGYLFRSNSTETKKRNLMLFIRPSIIRDRSQFQSAS 593 Query: 605 KEKYTRYRQEQ-QQRIDGKSKALVGSEDLPVLDEN 638 KY + E+ +QR + + DL L E Sbjct: 594 ASKYHSFSAEENKQRNVSNGEGGLLDNDLLRLPEG 628 >UniRef50_P31700 General secretion pathway protein D n=5 Tax=Enterobacteriaceae RepID=GSPD1_ERWCH Length = 712 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 326/683 (47%), Positives = 438/683 (64%), Gaps = 59/683 (8%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 KG+ K L +L+ + ++ A+F DI++F+ V ++L KT++IDP+V+GT Sbjct: 4 KGIKKSWGWLGLTVLLLGSPCGWAAEFSASFKGTDIQEFINTVSKNLNKTVIIDPTVRGT 63 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 ISVRS D + +YYQFFLS+LD+YG+SV+ +DNG LKV+RS + K+S +A++ +PGV Sbjct: 64 ISVRSYDMMDEGQYYQFFLSVLDVYGFSVVPMDNGVLKVIRSKDAKSSSIPLANNEQPGV 123 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 GDELVTR+VPL NV ARDLAPLLRQ+ D G VVHYEPSNVL++TGRA+ I +L++++ Sbjct: 124 GDELVTRVVPLNNVAARDLAPLLRQLNDNAGAGTVVHYEPSNVLLMTGRAAVIKRLVDIV 183 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 VD G + + L YASAED+A+++N L K+ +P+ + A +VAD RTNS+++ Sbjct: 184 NTVDKTGDREMITVSLNYASAEDVAKLVNDLNKT-DEKNALPSTMLANVVADGRTNSVVV 242 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK-------- 293 SG E +++ LD ++ +G T+V YLKYAKA +L+EVL G Sbjct: 243 SGEENTSPCAVEMIRQLDRKQVAQGGTKVIYLKYAKALDLIEVLAGNGTSGNRNSSSTNS 302 Query: 294 -------------------------------------------DEKGNARKPSSSGAMDN 310 ++ + Sbjct: 303 SRPSSTRSSSTLNNSNSSSSGSSSGSGSSSSSSSSSMGFGSAFGSANSSGGRTIVIQGKE 362 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 V + A +QTNSL+IT + L VI +LDIRR QVLVEAII E+QD +GLNLG+QWA Sbjct: 363 VTVRAHDQTNSLIITRPPDIMRDLEQVINQLDIRRPQVLVEAIIAEIQDADGLNLGIQWA 422 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 NK G QFTNTG+PI A G ++ +G +T+A S +NG+ AGF+ G+W +L Sbjct: 423 NKRAGMTQFTNTGIPISTAMIGTDQFRSDGTLTTAYA--SALSNFNGITAGFYRGNWSML 480 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT--SGDNVFNTVERKTVG 488 LTAL+S+ KND+LATPSIVTLDN A+FNVGQ+VPVL+GSQTT SGDN+FNTVERKTVG Sbjct: 481 LTALSSDGKNDVLATPSIVTLDNMEATFNVGQEVPVLTGSQTTVGSGDNIFNTVERKTVG 540 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSV---DSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 KL+V PQ+NEGD+VLL+IEQEVSSV + SSNS+LG TFNTRT+ NAV+V ETVV+ Sbjct: 541 IKLRVKPQINEGDSVLLQIEQEVSSVAEGNGSSNSSLGVTFNTRTVNNAVMVTNRETVVV 600 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGLLD + E +KVPLLGDIP +G LFR + +KRNLM+F+RPTIIRD Y+ S Sbjct: 601 GGLLDKTAIETNNKVPLLGDIPWLGSLFRSKTQTMSKRNLMLFLRPTIIRDPQQYQQASI 660 Query: 606 EKYTRYRQEQQQRIDGKSKALVG 628 KY + EQQQ+ + L Sbjct: 661 SKYNSFNNEQQQQRGQGNSVLDN 683 >UniRef50_A8A4B9 General secretion pathway protein D n=30 Tax=Escherichia RepID=A8A4B9_ECOHS Length = 686 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 282/641 (43%), Positives = 403/641 (62%), Gaps = 25/641 (3%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 AE + ANF + D++ F+E VG +L KTI++ P VQG +S+R+ ++++YYQ FL++ Sbjct: 40 AEEATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNL 99 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSP-GMIADSSRPGVGDELVTRIVPLENVPARDLA 141 L+ GY+V+ ++N LKVV+S+ K P ++ + S GDE+VT++VP+ NV R+LA Sbjct: 100 LEAQGYAVVPMENDVLKVVKSSAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELA 159 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 P+LRQM+D+ GNVV+Y+PSNV++LTGRAS + +L EVI+ VD G +++I L+ AS Sbjct: 160 PILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQSVDHAGNRTEEVIPLDNAS 219 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 A ++A +L L S PA L ++IVAD+RTNS+I+SG R ++ L++ LD E Sbjct: 220 ASEIARVLESLTKNSGENQ--PATLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDSE 277 Query: 262 ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNS 321 GN++V+YLKY+KA +LV+VL VS L K A SG + V+I A + +N+ Sbjct: 278 MERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEEAEGTVGSG-REIVSIAASKHSNA 336 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 L++TA Q + + L +VI +LDIRRAQV VEA+IVEV +G+ +N GVQWA+K+ G QF N Sbjct: 337 LIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAEGSNINFGVQWASKDAGLMQFAN 396 Query: 382 TGLPIFNAAQGVADYK---------KNGGITSANPAWDM--------FSAYNGMAAGFFN 424 G T+ NP + S ++G A G Sbjct: 397 GTQIPIGTLGAAISQAKPQKGSTVISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVK 456 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-NVFNTVE 483 GDW L+ A+ +++ +++L+TPSI TLDN+ A F VGQDVPVL+GS S + N FNTVE Sbjct: 457 GDWMALVQAVKNDSSSNVLSTPSITTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVE 516 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETV 543 RK VG LKVTPQ+NEG+AV + IEQEVS V+ ++ + F R ++ VL GE + Sbjct: 517 RKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEGQTSLDV--VFGERKLKTTVLANDGELI 574 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 VLGGL+DD + E V+KVPLLGDIPL+G LF+ T+ ++ KRNLMVFIRPTI+RD + Sbjct: 575 VLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADKKEKRNLMVFIRPTILRDGMAADGV 634 Query: 604 SKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHA 644 S+ KY R EQ R D + +L+ PVL Sbjct: 635 SQRKYNYMRAEQIYR-DEQGLSLMPHTAQPVLPAQNQALPP 674 >UniRef50_A8GJQ5 General secretion pathway protein D n=6 Tax=Enterobacteriaceae RepID=A8GJQ5_SERP5 Length = 660 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 289/647 (44%), Positives = 410/647 (63%), Gaps = 22/647 (3%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 M I + +L+ + + E + ANF DI +F+ + LGKTI+ID +V+G Sbjct: 21 MLFSKMIALMAVLVMLLWVSAPVQAEAFSANFKGTDIHEFISTASKALGKTIIIDDAVKG 80 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 ++VRS + +YYQFFL++LD+YGY+VI++ N LKV+ + + K + + + P Sbjct: 81 KVTVRSYEPLDAGQYYQFFLNVLDVYGYAVISMPNNVLKVIPAKDGKRAA--LNALNTPA 138 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 GDEL+ RIVPL N+ A+++APL+RQ D+ +GNVV E N L++TGRA +N L+E+ Sbjct: 139 EGDELIMRIVPLNNIAAKEVAPLMRQFNDSIGIGNVVFLESGNALLITGRADVVNSLVEL 198 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 +D + L++ASA D+ I+ L + +++ AL K+VAD+RTN+++ Sbjct: 199 AHEMDRTEQAGVVSVALQHASATDVVSIVTTLFRDE-NRTKKGALPGMKVVADERTNTVL 257 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 I+G + RI +++ LD E++ +GNT+V LKYAKA L+EVL+GVS L+DEK Sbjct: 258 IAGEPSLQARIEGIIQQLDQEKASQGNTKVIRLKYAKAQGLLEVLSGVSANLQDEKKTVG 317 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 S M N+ I ADEQTN+L+I A V L VI +LDIRRAQVLVEA+IVE+Q+ Sbjct: 318 NNVS--VMKNMVIKADEQTNALIINATPDVMSNLEKVIEQLDIRRAQVLVEAVIVEMQNA 375 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 +GLNLG+QWAN+ G QF N I +G ++F NG+ Sbjct: 376 DGLNLGIQWANRYGGGTQFGNAQAQIAPGFKGGMT--------------EVFKNANGLVT 421 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN 480 GF++G+W LLTA+++ ++N+ILATPSI+TLDN+ A F+VGQDVP+L+GSQTT+ DNVFN Sbjct: 422 GFYSGNWAGLLTAISNQSQNNILATPSIMTLDNEDAEFSVGQDVPILTGSQTTNSDNVFN 481 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS---TLGPTFNTRTIQNAVLV 537 TV RKTVG KLKV PQ+N+G +VLL+IEQEVSSV +S+ LG TFN RT+ N VLV Sbjct: 482 TVARKTVGIKLKVKPQINKGQSVLLQIEQEVSSVAENSSVDKDNLGATFNIRTVNNTVLV 541 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 ++GETVV+GGLLD + S VP L IPL+G LFR TS + +KRNL++FIRPT+IR Sbjct: 542 ESGETVVVGGLLDKSQSDSKSAVPFLERIPLLGALFRSTSHKESKRNLILFIRPTVIRST 601 Query: 598 DVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHA 644 + Y S K R+R Q + K+ A + + + TF Sbjct: 602 EEYAQESMRKAARFRSLDAQPLPLKTHAEAQLDRVGSTENGTFQRIQ 648 >UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified Gammaproteobacteria RepID=A0Z790_9GAMM Length = 696 Score = 491 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 238/646 (36%), Positives = 350/646 (54%), Gaps = 22/646 (3%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 LL A + ++Y N + DI++ ++ V G TI++DPSV+G I V S Sbjct: 32 WLIMLLVATSLSSIQTVSAQEYTVNLQDTDIQELIKFVADVTGATIVVDPSVKGKIKVVS 91 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 + ++ E Y FLSILD+ GY+ + N ++V+ + + ++SP + S DE V Sbjct: 92 SRPVNKSELYDLFLSILDVQGYTAVRTGN-VIRVIPNKDARSSPVEVPSSGAMSSNDEYV 150 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 T+++ LEN+ A L P+LR ++ + ++ Y PSN +I++ AS I +++E+I R+D Sbjct: 151 TQVIRLENISAAKLIPVLRPLVPQQA--HMAAYAPSNAIIISDIASNIRRIVEIIDRMDR 208 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 + Q+I L YA AED+ ++L L +S G +VADKRTNS++++ E Sbjct: 209 SAIQGTQVIKLRYAVAEDVVQMLQTLEKQSRGDGAESND-EVTLVADKRTNSVVVTADEL 267 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 QRI L+ LD + GN +V YL+YA A + EVLT V + + + S+ Sbjct: 268 NSQRILDLVTYLDTPLEQSGNVKVVYLEYADAVEVAEVLTRVMQNMSRLDTGGDRKPST- 326 Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 N I ADE TN+L+ITAD L VIARLDIRRAQVLVEAIIVE++ G LG Sbjct: 327 -NTNSTIEADEGTNALIITADADEMASLEAVIARLDIRRAQVLVEAIIVEMEITEGQELG 385 Query: 367 VQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM----------FSAYN 416 +QW + +N + A G ++N + Sbjct: 386 LQWIFADDSGAFGSNVSTSSAQQQRNAAIGNALLGDENSNADIGVRDLAGALSQVPGTTL 445 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 G + V+L AL + +IL+TPS++TLDN+ A VGQ+VP ++GS + +G Sbjct: 446 GWGVVGDDLSMSVILNALETQGNANILSTPSLLTLDNQEAYITVGQNVPFVTGSYSNTGG 505 Query: 477 -----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTI 531 N F T+ER+ VG LKVTPQVNEGD+V+L+I QEVSS+ + N R I Sbjct: 506 ASNVQNPFQTIERENVGITLKVTPQVNEGDSVVLDIVQEVSSISQQLLAAADVITNERKI 565 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 + V+ + G+ VVLGGL+ D ++ VP L DIPL+G+LFR K NL+VFIRP Sbjct: 566 ETKVMAQDGDVVVLGGLVKDDVQDSQQGVPFLQDIPLLGRLFRNDVVSVTKSNLLVFIRP 625 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 TI+RDD+ R + EKY R +Q +R + + +LPVL E Sbjct: 626 TIVRDDESLRGATAEKYRYIRDQQAER-RARGIMFLDDGNLPVLPE 670 >UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVD5_9GAMM Length = 694 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 244/627 (38%), Positives = 367/627 (58%), Gaps = 20/627 (3%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A A+ E + N +ADI + V + G+ +IDP V+ ++V S+ S E Y+ Sbjct: 33 PAQAADEESFTLNLKDADIEALISTVAKKTGRNFVIDPRVKARVTVISSQAMSGNELYEV 92 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 F SIL ++GY+ + + +K++ N K + + G+GD+LVT+++P+ NV A Sbjct: 93 FQSILQVHGYAAVPAGD-VIKILPEVNAKQGAVPTITNGQ-GMGDDLVTQVIPIRNVAAA 150 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 L P+LR ++ G++ Y SN++++T RAS I++L ++I R+D ++ + I LE Sbjct: 151 QLVPILRPLVPQQ--GHLAAYSGSNIIVITDRASNISRLADIIGRIDRPDNDEIESIQLE 208 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSL 258 +ASA +L I+N L S G ++ + + ++ AD+RTNS++ISG + AR RI L+ S+ Sbjct: 209 HASAPELVRIINSL---SQGGNKGAEVDTPQLAADERTNSILISGSKAARDRIKKLIASM 265 Query: 259 DVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS---SSGAMDNVAITA 315 D + GNT+V YLKYAKA ++ E+L GV+E K A + + + V I A Sbjct: 266 DTPLEQGGNTKVVYLKYAKAEDMAEILKGVNEGQKKAAEAAGGKAAAATVSSDKEVDIQA 325 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 D TNSL+ITA + +V+ +LDIRRAQV VEAIIVEV D LG + N Sbjct: 326 DPGTNSLIITAAPDALRNIESVVRQLDIRRAQVHVEAIIVEVSDTAARELGFSYLFANEN 385 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-----WGVL 430 F N P+ A G NG ++ S NG GF + D + + Sbjct: 386 G--FDNETNPVGGALLGGGGDVINGIAAASTGDGSGASVPNGFTVGFGDRDNSGNVFAGI 443 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG---DNVFNTVERKTV 487 L A+AS+ + ++L+TPSIVTLDN+ A VGQ+VP ++GS TT+ +N F TVER+ V Sbjct: 444 LRAVASDTEANLLSTPSIVTLDNEEAEIVVGQNVPFVTGSYTTASSGANNPFQTVERQDV 503 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGG 547 G LK+TPQ+NEGD + L+IEQE SSV SS ++ N R I+ +V+++ G+ +VLGG Sbjct: 504 GVTLKITPQINEGDVIRLDIEQEASSVVESSVASGQLITNKREIKTSVMIEDGQMLVLGG 563 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 L+DD +++ + KVPLLGDIPL+G+LF+Y + KRNLMVF+ P I+RD + S+EK Sbjct: 564 LIDDQTRKSLFKVPLLGDIPLLGRLFQYRTNSNDKRNLMVFLHPKILRDRLSADATSQEK 623 Query: 608 YTRYRQEQQQRIDGKSKALVGSEDLPV 634 Y R Q++ D K V + LP Sbjct: 624 YQFMRGRQREAGDIKPIFNVSTAALPP 650 >UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0C8_9DELT Length = 690 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 228/646 (35%), Positives = 359/646 (55%), Gaps = 28/646 (4%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 + E NF ADI + V + GKT ++DP+V+G I++ S+ E Y F Sbjct: 39 PRPGQAETITLNFKEADIESVINSVARITGKTFIVDPAVRGNITIVSSQPMRADEVYGVF 98 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG--DELVTRIVPLENVPA 137 LSIL ++ Y+ + N +K++ +A + AD+ P D +VTRI L+ + A Sbjct: 99 LSILQVHDYAAVEAGN-VVKIIPAAKAGQDLVITADAEHPLELEEDRIVTRIYRLQYLQA 157 Query: 138 RDLAPLLRQMMD-AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 L P+LR M+ + + + N LI T RA T+ +L+ +++R+D + +I+ Sbjct: 158 DRLVPILRPMLGTRTGQMSALAVKEGNALIFTERAGTVERLLRIVRRLDQSSGGEMEIVT 217 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 LE+A A D+ ++ ++ + + ++VAD RTNS+++ G R+ + + Sbjct: 218 LEHADARDVVSVIREM----ELGTGRLSAEQLRLVADSRTNSVLLQGDPYHLLRVKATIL 273 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITAD 316 LD ++ G+T+V +L++AKA +LV +LTG+ + +R+ +V I AD Sbjct: 274 HLDTPLAKGGDTQVVFLRHAKAEDLVPILTGMGKYD-----GSREERRGQQRQDVDIQAD 328 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA 376 TN+L++T +V + L TVI +LDIRRAQ+++EA+I E+ ++LG+QW + + Sbjct: 329 ANTNALIMTGPPAVLQNLQTVIRQLDIRRAQLMIEAVIAEISTARAVDLGIQWFSADADK 388 Query: 377 QQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMA--AGFFNGDWGVLLTAL 434 + G+A + A ++G G +G L+ AL Sbjct: 389 VIGGTNFPGSGASMSGIAAGDEGSIAALAGLGGFNMGVFSGSTEILGREFFSFGALVNAL 448 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS----QTTSGDNVFNTVERKTVGTK 490 A + +IL+TPS+VT+DN+ A VGQ+VP L+GS T G + F TVER+ VG K Sbjct: 449 ARDGDTNILSTPSLVTMDNQEAEIIVGQNVPFLTGSFTEGATGVGGSPFQTVERRDVGIK 508 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 L+V PQV EGD + L+IEQEVSSV + G NTR I +VLV+ G+ +VLGGL+ Sbjct: 509 LRVKPQVTEGDVIRLQIEQEVSSV-ERDDLAAGLVTNTRNINTSVLVEDGKVLVLGGLIS 567 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 D +E VSKVPLLGDIPL G LFR+T +ER+KRNLMVF+RP I+RD ++ +S+ +Y Sbjct: 568 DDVQETVSKVPLLGDIPLFGALFRHTRSERSKRNLMVFLRPVILRDQEMSSRISQGQYDM 627 Query: 611 YRQEQQQRIDGKSKALVGSEDLPVL------DENTFNSHAP-APSS 649 RQ+Q +R D K L+ ++ PVL ++ F+ P +P+S Sbjct: 628 LRQQQLER-DSKGVKLMPGQNQPVLLEFEAFEDQHFHPLPPQSPAS 672 >UniRef50_C4UIB8 General secretion pathway protein D n=4 Tax=Yersinia RepID=C4UIB8_YERRU Length = 674 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 280/613 (45%), Positives = 391/613 (63%), Gaps = 20/613 (3%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 L+ + + +A + + FN+ADI++F+ V + L KTI+IDP VQG ISVRS + Sbjct: 37 VLVTLVFVIYTSNAYSSDFSVKFNDADIKEFINTVSKSLNKTIIIDPKVQGLISVRSYER 96 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 +++YYQFFL++LD++G++V+ + N LKV+ S K+S I GDEL+ RI Sbjct: 97 LDKEKYYQFFLNVLDVHGFTVLEMPNNILKVIPSKRAKSSAPPILMKDDIFNGDELINRI 156 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 +PL+ + A+++ PLLRQ+ D G+V HYEP+N L++TGRA T+ +L+E+I D G Sbjct: 157 IPLKYISAKNVTPLLRQLNDNTDSGSVAHYEPTNSLLITGRAGTVKRLVEIISEFDREGE 216 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 + L YASA ++ +++ +L+ + + K+VAD+RTNS++ISG +R+ Sbjct: 217 SSVDMYKLAYASATEVTKLVTELLRPNVA-GKQDTAQMVKVVADERTNSILISGDPASRK 275 Query: 250 RITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD 309 S++K LD E+ GNT+V YLKYAKA L++VL GVS +KDEK S++ Sbjct: 276 SAESMIKKLDKEQISHGNTKVIYLKYAKAEKLLDVLNGVSVSIKDEKKKVSHISNTIKKS 335 Query: 310 NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW 369 I AD+QTNSL+ITA +V L VI +LDIRRAQVLVEAIIVE QDG G+NLG+QW Sbjct: 336 --MIKADDQTNSLIITASPNVMYDLEKVIEKLDIRRAQVLVEAIIVEAQDGEGINLGIQW 393 Query: 370 ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGV 429 K F Y K+ N + + +G+ GF+ G+W Sbjct: 394 DTKQKKVGGF--------------ISYNKSNLGNIQNGVTSIANGISGLTTGFYRGNWSG 439 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 L TALA+N+ N+ILATPSIVTLDN A F+VGQ+VPVLS QTTS D V+NT+ R++VG Sbjct: 440 LFTALATNSSNEILATPSIVTLDNMDAEFSVGQEVPVLSSQQTTSTDKVYNTISRQSVGI 499 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS---TLGPTFNTRTIQNAVLVKTGETVVLG 546 LKV PQ+N+GD+VLLEI QEVSSV +SN +G TFN R + NAVLVK+GETVV+G Sbjct: 500 MLKVKPQINKGDSVLLEIRQEVSSVAENSNVDKDNIGSTFNKRVVNNAVLVKSGETVVVG 559 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKE 606 GLLD ++K+PLLGDIP++G LFR + KRNL++FI+PTIIR+ D Y S + E Sbjct: 560 GLLDKKVSNVINKIPLLGDIPIIGNLFRQKKEKIEKRNLILFIKPTIIRESDDYLSTTSE 619 Query: 607 KYTRYRQEQQQRI 619 K + ++ Sbjct: 620 KSKTFNEKNNDWN 632 >UniRef50_P45779 General secretion pathway protein D n=102 Tax=Proteobacteria RepID=GSPD_VIBCH Length = 674 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 288/658 (43%), Positives = 419/658 (63%), Gaps = 27/658 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK K + LLA L+ NE + A+F DI++F+ IVG++L KTI++DPSV+G Sbjct: 1 MKYWLKKSSWLLAGSLLSTPLAMANE-FSASFKGTDIQEFINIVGRNLEKTIIVDPSVRG 59 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 + VRS DT ++++YY FFLS+L++YG++V+ +DNG LKV++S + KTS + Sbjct: 60 KVDVRSFDTLNEEQYYSFFLSVLEVYGFAVVEMDNGVLKVIKSKDAKTSAIPVLSGEERA 119 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 GDE++T++V ++NV R+L+PLLRQ++D GNVVHY+P+N++++TGRA+ +N+L E+ Sbjct: 120 NGDEVITQVVAVKNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEI 179 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 I+RVD G ++ +++ L ASA ++ I+ L + ++ P L K VAD+RTNS++ Sbjct: 180 IRRVDQAGDKEIEVVELNNASAAEMVRIVEALNKTTDAQNT-PEFLKPKFVADERTNSIL 238 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 ISG K R+R+ L+K LDVE + +GN RV YLKYAKA +LVEVL GVSE L+ EKG + Sbjct: 239 ISGDPKVRERLKRLIKQLDVEMAAKGNNRVVYLKYAKAEDLVEVLKGVSENLQAEKGTGQ 298 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 +S + V I A TNSLV+TA Q + + VI +LDIRRAQVL+EA+IVE+ +G Sbjct: 299 PTTSK--RNEVMIAAHADTNSLVLTAPQDIMNAMLEVIGQLDIRRAQVLIEALIVEMAEG 356 Query: 361 NGLNLGVQWANKNVGAQ-QFTNTGLPIFN-------------------AAQGVADYKKNG 400 +G+NLGVQW + G+ Q+ NTG I N + Sbjct: 357 DGINLGVQWGSLESGSVIQYGNTGASIGNVMIGLEEAKDTTQTKAVYDTNNNFLRNETTT 416 Query: 401 GITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNV 460 S+ G A GDW L+ A+++++ ++IL++PSI +DN ASF V Sbjct: 417 TKGDYTKLASALSSIQGAAVSIAMGDWTALINAVSNDSSSNILSSPSITVMDNGEASFIV 476 Query: 461 GQDVPVLSGSQTTSGD-NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN 519 G++VPV++GS S + N F TV+RK VG KLKV PQ+NEG++V L IEQEVS+V + N Sbjct: 477 GEEVPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGNSVQLNIEQEVSNVLGA-N 535 Query: 520 STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE 579 + F R + +V+V+ G+ +VLGGL+D+ + E SKVPLLGDIPL+GQLFR TS++ Sbjct: 536 GAVDVRFAKRQLNTSVMVQDGQMLVLGGLIDERALESESKVPLLGDIPLLGQLFRSTSSQ 595 Query: 580 RAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 K+NLMVFI+PTIIRD +++ KY R EQ R K L+ +PVL + Sbjct: 596 VEKKNLMVFIKPTIIRDGVTADGITQRKYNYIRAEQLFRA-EKGLRLLDDASVPVLPK 652 >UniRef50_A1WZM1 General secretion pathway protein D n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZM1_HALHL Length = 670 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 205/650 (31%), Positives = 329/650 (50%), Gaps = 28/650 (4%) Query: 5 NKITCCLLAALLMPCAGHAENEQ---YGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 LLA +L+ A E+ NF +ADI+ + +V + G+ ++DP V+G Sbjct: 25 ILFIAALLAPMLVVADDDAWAERGDGITLNFEDADIKSVIALVSERTGRNFVVDPRVRGE 84 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 ++V S+ + YQ FLS L ++G++ I D +++V K + + Sbjct: 85 LTVISSQPVDDDQLYQVFLSALQIHGFAAIPADGA-IRIVPKNIAKRDQTPVPEPGTAES 143 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 G VT+++P+E+V A +L PLLR ++ + + Y +N LI++ A I +L +I Sbjct: 144 GHNFVTQVIPIEHVEASELIPLLRPLISDEA--ELAAYSETNTLIVSETAGNIGRLKRLI 201 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 RVD T +++ LE+ SA ++ E++ + E + AD R+NS+++ Sbjct: 202 DRVDQDTTGVTEVVPLEHGSASEIVEMVEAIEPEKRAG------RRLLLAADDRSNSVLV 255 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 G R + L++ LD E +E V YL+Y+ A ++V +L G++E + Sbjct: 256 GGDPARRPSVMELIQRLDAELEDEEGAAVIYLRYSDAESIVPILEGMAEGMARGPEG--- 312 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 V+I E TN+L+I + KL V+ RLD+RRAQVLVEAII EV Sbjct: 313 ------ETGVSIHDHEATNALIINGPPDLVAKLRGVVNRLDVRRAQVLVEAIIAEVSAER 366 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 LG+QW N + + G N + G Sbjct: 367 SQELGIQWGALGDQGVGLVNFDAAGGGSVTNIGRAAAGGTDALGNLSLGSGLTAGAATRG 426 Query: 422 FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT 481 G+ GVLL AL+S + ++IL+TPS++T+DN+ A VGQ+VP ++G + + F + Sbjct: 427 ---GELGVLLRALSSESDSNILSTPSVMTMDNEEAEIVVGQNVPFVTGREVGDTRD-FQS 482 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGE 541 ++R+ VG +L++ PQ+NEGD++ L+IE+EVS V + + R+I + +V GE Sbjct: 483 IQREDVGVQLRIRPQINEGDSLKLDIEKEVSDVQERGEAEDI-VTSMRSITTSAMVDDGE 541 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 +VLGGL+D+ ++ Q +VP LG IP +G LFRY S+ K+NLMVF+RP II + D R Sbjct: 542 IMVLGGLMDEQAESQTDRVPGLGSIPGLGWLFRYESSAAQKQNLMVFLRPRIIENRDDAR 601 Query: 602 SLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE-NTFNSHAPAPSSR 650 L+ KY R Q + + ED+PVL + F P R Sbjct: 602 ELTSPKYNLIRNRQLA-SRARGMRFLDDEDIPVLSQRRAFMELPPEFGDR 650 >UniRef50_A1JPH4 General secretion pathway protein D n=28 Tax=Yersinia RepID=A1JPH4_YERE8 Length = 648 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 281/629 (44%), Positives = 417/629 (66%), Gaps = 22/629 (3%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 + ++ A + P G+AEN + A+F +ADI++F+ V +++ KTI+IDP VQG +SVRS Sbjct: 16 LFKFVILAAIFPIVGYAEN--FSASFRDADIKEFINTVSKNINKTIIIDPKVQGLVSVRS 73 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 + +++YYQFFL++LD+YGY+V+ + N LKV+ + K S + +++ P GDEL+ Sbjct: 74 YELLDEEKYYQFFLNVLDVYGYTVVEMPNNILKVIPAKRAKGSVVPLQNNAAPPQGDELI 133 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 R+ L+++ A++LAPLLRQ+ D G++V+Y+PSNV+++TGRA+ +N+L +I +D Sbjct: 134 NRVFKLKHLLAKNLAPLLRQLNDNSESGSIVNYDPSNVILITGRAAVVNRLYAIISTLDQ 193 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 G + ++ L +A A D+ +++NQ+I+ + ++ + +A +VAD RTNS+IISG Sbjct: 194 PGETEVELYQLNHAVAADIIKLVNQVINPVNITAKQESFNAATVVADDRTNSVIISGDRH 253 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 R++ ++K LD ++ G+T+V Y+KYA+A+ L++VL GVS+ + +K +K S Sbjct: 254 IRKKTLQMIKRLDHQQDSYGSTKVVYMKYAQASKLLDVLNGVSQGSQSDK--TKKNSGKS 311 Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 + NV+I A +QTN+LVITAD V ++L VI RLD+RRAQVLVEAIIVE Q+G GLNLG Sbjct: 312 HIKNVSIKAYDQTNALVITADPKVMKELDQVIERLDVRRAQVLVEAIIVETQNGEGLNLG 371 Query: 367 VQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD 426 +QWANK G F K N T+ N + G+ AGF+ G+ Sbjct: 372 IQWANKLYGGANFLQ---------------KPNSIQTNNNSGNPIPMMIAGLTAGFYKGN 416 Query: 427 WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKT 486 W L TALA+N+ N+ILATPSIVTLDN A FNVGQ+VPVL+ +QTT+ D V+N++ R++ Sbjct: 417 WDGLFTALATNSNNNILATPSIVTLDNMEAEFNVGQEVPVLTSTQTTATDKVYNSISRQS 476 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS---TLGPTFNTRTIQNAVLVKTGETV 543 VG LKV PQ+N+GD+VLLEI QEVSSV SS+ LG FN R + NAVLVK+GETV Sbjct: 477 VGVMLKVKPQINKGDSVLLEIRQEVSSVADSSDVNANNLGSVFNKRVVNNAVLVKSGETV 536 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 V+GGLLD + ++KVPLLGDIP +G LFR + + K NL++FIRPTI+R+ Y + Sbjct: 537 VVGGLLDKKINKIINKVPLLGDIPFIGGLFRQSKEKIEKSNLILFIRPTILRETSDYSQV 596 Query: 604 SKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 + +KY Y + + S+ + Sbjct: 597 TVDKYAEYNNLHSINSGMERPIDIVSDRI 625 >UniRef50_Q0A5Z6 General secretion pathway protein D n=2 Tax=Ectothiorhodospiraceae RepID=Q0A5Z6_ALHEH Length = 673 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 206/631 (32%), Positives = 338/631 (53%), Gaps = 18/631 (2%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+E NF +AD+R+ V +V Q G ++DP V+G +++ S YQ FLS L Sbjct: 33 EDEGITLNFQDADLREVVALVSQETGVNFIVDPRVRGDVTIVSQTPVDADGLYQVFLSAL 92 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 ++G++ + ++++ A + + +GD+ VTR++ +++V A +L P+ Sbjct: 93 KIHGFAAVPTPEA-VRIIPRAQARQDRIPSDGDTTRSLGDQAVTRVIRVDHVNAAELVPV 151 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 LR ++ G++ Y P+N LI++ A+ +++L +I RVD + ++I LE+A+A Sbjct: 152 LRPLVPQD--GHLAAYSPANSLIISDTAANVDRLEVLIGRVDRDTEGEIEVIQLEHAAAS 209 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES 263 ++ ++ +L + + ++VAD+R NS++I+G + R + +L+ +D E + Sbjct: 210 EVVRMVREL------EDEEREGRRLRVVADERANSVMIAGDRQRRLLVRALIGQIDSEVA 263 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV 323 EG +V YL++A A LV VL G+ L + +G + I A TN+LV Sbjct: 264 AEGTAQVVYLRFADAEELVPVLEGIGTSLLESRGGNDA-----GGQGLDIRAHSSTNALV 318 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG 383 + V L +V+ RLDIRRAQVLVEA+I EV LGVQW + Sbjct: 319 MNGPADVLRSLRSVLNRLDIRRAQVLVEAVIAEVSQDRVEELGVQWGVLSEDRGVGLINF 378 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF----NGDWGVLLTALASNNK 439 A G+AD + G S D+ +G A G + L+ AL+ ++ Sbjct: 379 GGAAGAGGGIADVIRAAGAISDGSTADLPQVGDGAAIGVGDLRGSTQVAALIRALSGDSA 438 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNE 499 ++IL+TPS++T+DN+ A VGQ+VP ++G F++++R+ VG +L++ PQ+NE Sbjct: 439 SNILSTPSLMTMDNEEAEIVVGQNVPFITGRAIEDSGQAFSSIQRQDVGVQLRIRPQINE 498 Query: 500 GDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSK 559 GD + LEIEQEVSSV + R+++ +V+V+ G+ VVLGGL+DD + + Sbjct: 499 GDTLKLEIEQEVSSVSGGIQGAADLVTDLRSVRTSVMVENGQMVVLGGLIDDQLRTRSQA 558 Query: 560 VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRI 619 VPLLG++P +G+LFRY ++ KRNLMVF+RP IIRD + E Y R R QQ+ Sbjct: 559 VPLLGNLPGLGRLFRYDRSQVEKRNLMVFLRPVIIRDTAAQERATAEPYNRMRAMQQRFR 618 Query: 620 DGKSKALVGSEDLPVLDENTFNSHAPAPSSR 650 D + + + F S PA R Sbjct: 619 DEGVPLMPDDAAPVLAESEQFMSLPPAYDDR 649 >UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P591_9PROT Length = 690 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 213/655 (32%), Positives = 324/655 (49%), Gaps = 26/655 (3%) Query: 3 GLNKITCCLLAALLMPC--AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 L + LA + A E+E NF NADI++ + + Q K L+DP V+G Sbjct: 6 ALRSLLIFSLAIFVAAPCHAEKKEDELVTLNFVNADIQEVIRAISQISKKNFLVDPRVKG 65 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 TI++ S S Y LS L L GY+ + NG +++ A K DS G Sbjct: 66 TINIVSATPVSPALGYDILLSALRLQGYAAVES-NGVTQIIPEAEAKQH----IDSLAQG 120 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 GD+LVT + L+ A L ++R M+ SV VV Y SN L++T AS++ ++ ++ Sbjct: 121 RGDKLVTHVFVLKYESASQLVNVVRPMISPNSV--VVAYPASNALVVTDYASSVRRIDKL 178 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHG-KSQMPALLSAKIVADKRTNSL 239 I +D + +I +++ASA DLA I+N+L+ E+ +S ++AD RTN L Sbjct: 179 IDSIDQPSADAPIVIPVKHASAVDLANIINRLMPEAAASQSGGDDNQRFVLLADSRTNGL 238 Query: 240 II-SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG- 297 ++ SG R+ L+ LD + GN V LK A AT L + L V Sbjct: 239 LLRSGNPGRIARVKELVTKLDSAANTPGNIHVVQLKNADATKLAQTLRSVLSGETAPPAA 298 Query: 298 --NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 + + I AD +N+L++TA + + L +VI +LD+RR Q+ VEA+IV Sbjct: 299 PSTVPQSAGVATSSTGMIQADPSSNALIVTASEPIYNNLRSVIDKLDVRRPQIFVEALIV 358 Query: 356 EVQDGNGLNLGVQW----ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM 411 EV GVQW GA T + + D N + + Sbjct: 359 EVTADKAAEFGVQWQNLVGASKSGAHIIGGTNFGSVASGNNIIDAANNLSTVNQGLNIGI 418 Query: 412 FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 + + + G+L AL ++ +IL+ P+++TLDN+ A VGQ+VP ++G Sbjct: 419 VNGTTTIPGVGTVLNLGMLARALETDTNANILSEPNLMTLDNEEAKIVVGQNVPFITGQY 478 Query: 472 ----TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTF 526 + + F T+ERK VG LK+ PQ+ +G V L+I QEVSSV SS+S+ G Sbjct: 479 AQTGSATTATPFQTIERKDVGLTLKIKPQIMQGGTVKLQIYQEVSSVLPSSSSSTSGLIT 538 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 N R+I++ +LV + VVLGGL+ D + SK PLLGDIP++G LFRY + + K NLM Sbjct: 539 NKRSIESNILVDDNQIVVLGGLIQDSVNDVQSKTPLLGDIPILGSLFRYDTRQHTKTNLM 598 Query: 587 VFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSE---DLPVLDEN 638 VFIRP I+ + Y+ L+ Y + ++++ L + LP L E Sbjct: 599 VFIRPYIMYQQNSYQQLTDNFYEQMNKKREDARMPDHWILPNDDKDKSLPPLPEK 653 >UniRef50_Q0VSG7 General (Type II) secretion pathway protein D n=2 Tax=Alcanivorax RepID=Q0VSG7_ALCBS Length = 710 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 213/662 (32%), Positives = 350/662 (52%), Gaps = 21/662 (3%) Query: 4 LNKITCCLLAALLMPCAGHAE----------NEQYGANFNNADIRQFVEIVGQHLGKTIL 53 L+KI L + +M + HA+ E + N NADI+ F+ V Q GK + Sbjct: 13 LSKIMLLLALSAVMVTSLHAQTTNQVQASDDGESWTVNIRNADIQAFISQVAQMTGKNFV 72 Query: 54 IDPSVQGT-ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGM 112 +DP V+ ++V S + + E Y+ FLS+L ++GY+ +++ + K+V + K S Sbjct: 73 VDPRVRARDVTVVSTKSLTSNEVYELFLSVLQVHGYAAVSVGD-ITKIVPNTTAKQSNLP 131 Query: 113 IADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAS 172 + + G+ELVTR++ +E+ P +L P+LR ++ G++ +N LI++ Sbjct: 132 LVE-KGSSSGEELVTRVIAVESTPVEELVPVLRPLVPQ--YGHLAAVGSANALIISDHLD 188 Query: 173 TINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVA 232 I ++ +I +D +E Q++ L++A A D+ ++L L ++ G+ A +VA Sbjct: 189 NIRRMEAIISSLDSAESEDVQVLKLKHAFAGDMVKMLESLTPQTGGRGGKSAEGGVIVVA 248 Query: 233 DKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 D+RTN LII G RQR+ +++SLD EE+ +V L + A ++ E+L + Sbjct: 249 DERTNRLIIKGDRVTRQRMLQMVRSLDTEETNNSGAKVIRLSHGDAKSMAELLKNFVDGA 308 Query: 293 KDEKGNARKPSSSGAMDN--VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 + ++S A++N V+I ADE N+LV+ A ++ +++ +VI++LD+RRAQ+L+ Sbjct: 309 SVNRAGGDGKTTSVALNNNEVSIQADESLNALVVRAKPAMMKQIQSVISKLDVRRAQILI 368 Query: 351 EAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWD 410 EA IVE+ G NLG Q+ + S D Sbjct: 369 EAAIVEISGEQGKNLGFQY-VGGSNEDGVGAVNFGGNGLSVNSVVQALASDDPSGLSLGD 427 Query: 411 MFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS 470 +A G + WG L+ AL++++ ++L+TPSI+TLDN+ AS VG++VP ++G Sbjct: 428 GITAGLGETDSDGDLKWGALIQALSTSSDVNLLSTPSILTLDNEEASIIVGENVPFVTGQ 487 Query: 471 QTTSGD---NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFN 527 T +G N F T++R+ VG LKVTP V + LE+EQE S+V S+ + Sbjct: 488 STNTGSGVSNPFTTIQREDVGLTLKVTPHVAGLSTIRLELEQESSAVKDSAGDAVDIVTT 547 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 TR +Q+ VL ET+ LGGL+ D + V KVP LGDIP++G LFR TS +R K NLMV Sbjct: 548 TRKLQSTVLADDAETIALGGLIKDDIRVTVRKVPFLGDIPVLGFLFRSTSKDRVKSNLMV 607 Query: 588 FIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAP 647 F++PTI+ ++D +S++KY Q + D V +P ++ F P P Sbjct: 608 FLKPTILGNNDRLVEMSRDKYMGLTALQFRLNDDGELEQVEKNPIPQSLDHIFEGRTPVP 667 Query: 648 SS 649 Sbjct: 668 QD 669 >UniRef50_C7R8G0 General secretion pathway protein D n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8G0_KANKD Length = 708 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 226/690 (32%), Positives = 359/690 (52%), Gaps = 53/690 (7%) Query: 1 MKGL-NKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQ 59 MK L N +T L AA L+ + A E+ N +ADIR+ VE V + GKT+++DP V+ Sbjct: 10 MKQLGNNLTMALCAAGLLLSSFSANAER--LNVRDADIREVVETVAKITGKTMIVDPRVK 67 Query: 60 G-TISVRSNDTF--SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS 116 G +++ + ++ + Y F+S L ++ + I NG +K++ ++ + Sbjct: 68 GLKVTIITAGNVDYTKDQIYNIFVSALQVHKFQAIEA-NGVVKIIPDQQARSEYSPVNVG 126 Query: 117 SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINK 176 + GD +T+++P++NV A+ + +LR ++ S G++ + +N LIL AS + + Sbjct: 127 NLDDYGDRYITQVIPVQNVDAQQIMNVLRPLVSPTS-GHLFAVQGTNTLILHDSASNVRR 185 Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 + E+I R D E+ ++I LE+ASA ++ IL L + S + Q + + VAD+RT Sbjct: 186 ITEIIDRTDKANDEEIEVIPLEHASASEIVRILESL-NRSGRQPQGNEVQEPRYVADERT 244 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 NS+++S ++ R R+ +L+ SLD + GNT+ +LKYAK+ + EVL+G+ E + E+ Sbjct: 245 NSILLSANDRQRVRLRALIGSLDRPLNSMGNTKTVFLKYAKSEQVAEVLSGIGEIKQKEE 304 Query: 297 GNARKPSSSGAMDNV-------AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 A +GA V +I + E+TN+LV+TA + + +VI LDIRR QV Sbjct: 305 AAASGRGGAGAGGGVATQRSLYSIQSHEETNALVLTAPPDIMREFDSVIRALDIRRKQVH 364 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKK----------- 398 VEAIIVE+ D LG+QW G+ + N G+ Sbjct: 365 VEAIIVEISDNKAKELGIQWLFSPEGSNTTPGGVVNFTNTGPGIGQVAAGAISARGTEEE 424 Query: 399 ----------------------NGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALAS 436 NG + WG + AL Sbjct: 425 VFTRDPETGEITGTETRRVGGDNGAALAEVLGGMQGLGLGVAKIRPDGFSWGAFIRALEG 484 Query: 437 NNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD-NVFNTVERKTVGTKLKVTP 495 ++ L+ PS+ TLDN A F GQ++P+++GS + N F VERK VG LK+TP Sbjct: 485 VTDSNTLSRPSVTTLDNVEAIFKSGQEIPIITGSTLGDNNSNPFQNVERKDVGVMLKLTP 544 Query: 496 QVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 Q+NEG+ V L+IEQEVSS+ S+N + N R ++ +VLV G VVLGGL+DD ++ Sbjct: 545 QINEGNYVRLDIEQEVSSIAGSTNVDV--VTNKREVKTSVLVPDGGMVVLGGLIDDDIQQ 602 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 KVP+LGDIP++G F+ T++ KRNLM+FI PT+++DD R LS KY+ R +Q Sbjct: 603 SSQKVPILGDIPVLGHAFKSQRTQKIKRNLMIFIHPTVLKDDAELRELSSAKYSYIRAQQ 662 Query: 616 QQRIDGKSKALVGSEDLPVLDENTFNSHAP 645 ++ + +L+ E+ VL P Sbjct: 663 IEQA-NRGISLMPEEETEVLPTYDEALVLP 691 >UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax=Alteromonadales RepID=Q21EP4_SACD2 Length = 666 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 225/653 (34%), Positives = 354/653 (54%), Gaps = 20/653 (3%) Query: 3 GLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTI 62 GL IT A+ A Y NF + DI + ++ V GKTI+IDP V+G I Sbjct: 9 GLATITIIFSCAVQAQPAARGSQPSYTVNFKDTDIHEVIKFVADATGKTIVIDPRVKGRI 68 Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG-- 120 V S T ++ E ++ FL+IL+++ ++ + + + ++++ + ++SP + D S G Sbjct: 69 KVISQTTVNKDELFELFLTILEVHDFTAVQVGD-VVRILPLKDARSSPVPVQDESDVGNR 127 Query: 121 -VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 + VT ++ L+N+ A + P+LR ++ S ++ Y SNV++++ A I +L + Sbjct: 128 ASTNGYVTEVIQLKNIEAAKVLPVLRPLVPQHS--HLSSYTESNVIVVSDTAPNIARLRD 185 Query: 180 VIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 VI+R+D +++ L+YA AEDL L +L + K + +IVADKR NS+ Sbjct: 186 VIERIDTAALPTTEVVPLKYADAEDLVATLTKL--DRGEKQSSTPVNQLQIVADKRNNSV 243 Query: 240 IISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA 299 ++SG + R+R L++ LD + GN RV YL YA A ++ L+ V + ++ + Sbjct: 244 LLSGEDIQRKRAKDLIRKLDRPPVQMGNVRVVYLNYANAKDVAATLSKVVQNMQQMQ--- 300 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 G D + ADE TN+L++T + L T++ RLDI+RAQVLVEAIIV++ Sbjct: 301 PGGKDKGGKDGATVEADEDTNALLLTGSGDMLNSLLTIVERLDIKRAQVLVEAIIVDINV 360 Query: 360 GNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN--- 416 LGVQW N F + + G N A + Sbjct: 361 DANKELGVQWMFSNENNGTFGGSSQGDGSLGSLATGTLGGGTDALTNLASGIAGNTGQLL 420 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG- 475 G+A ++ LL+AL +++ +IL+TPS+VT+DN+ AS +VGQ VP +GS +T+G Sbjct: 421 GVAGNNGGENFIALLSALQTSSDANILSTPSLVTMDNQEASISVGQSVPFRTGSYSTTGT 480 Query: 476 ----DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTI 531 N F T++R+ VG L VTP VNEG+ +LL+I QEVSS+ SS + N I Sbjct: 481 TGSVGNPFTTIQREDVGITLTVTPHVNEGNKILLDISQEVSSISSSVAGSADLITNQSKI 540 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 + +L G+ V+LGGL+ + ++ ++VPLLG IPL+G LF+Y ST+ K+NLMVFIR Sbjct: 541 ETQLLANDGQIVILGGLIQEDVQDGDTRVPLLGSIPLLGHLFKYQSTKFLKKNLMVFIRV 600 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHA 644 I+ DD+ + EKY R +Q ++ D K L+ + LPVL E T Sbjct: 601 KIVTDDEAMYGATAEKYQYIRDQQMRQHD-KGLNLMSRKILPVLPELTPFEQQ 652 >UniRef50_Q8VPC8 Hypothetical type II secretion protein n=6 Tax=Enterobacteriaceae RepID=Q8VPC8_ECOLX Length = 616 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 269/610 (44%), Positives = 383/610 (62%), Gaps = 25/610 (4%) Query: 54 IDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSP-GM 112 + P VQG +S+R+ ++++YYQ FL++L+ GY+V+ ++N LKVV+S+ K P + Sbjct: 1 MGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKSSAAKVEPLPL 60 Query: 113 IADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAS 172 + + S GDE+VT++VP+ NV R+LAP+LRQM+D+ GNVV+Y+PSNV++LTGRAS Sbjct: 61 VGEGSDNYAGDEMVTKVVPVRNVSVRELAPILRQMIDSAGSGNVVNYDPSNVIMLTGRAS 120 Query: 173 TINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVA 232 + +L EVI+RVD G +++I L+ ASA ++A +L L S PA L ++IVA Sbjct: 121 VVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSGENQ--PATLKSQIVA 178 Query: 233 DKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 D+RTNS+I+SG R ++ L++ LD E GN++V+YLKY+KA +LV+VL VS L Sbjct: 179 DERTNSVIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTL 238 Query: 293 KDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEA 352 K A SG + V+I A + +N+L++TA Q + + L +VI +LDIRRAQV VEA Sbjct: 239 TAAKEEAEGTVGSG-REIVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEA 297 Query: 353 IIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK---------KNGGIT 403 +IVEV +G+ +N GVQWA+K+ G QF N G T Sbjct: 298 LIVEVAEGSNINFGVQWASKDAGLMQFANGTQIPIGTLGAAISQAKPQKGSTVISENGAT 357 Query: 404 SANPAWDM--------FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKL 455 + NP + S ++G A G GDW L+ A+ +++ +++L+TPSI TLDN+ Sbjct: 358 TINPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSITTLDNQE 417 Query: 456 ASFNVGQDVPVLSGSQTTSGD-NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV 514 A F VGQDVPVL+GS S + N FNTVERK VG LKVTPQ+NEG+AV + IEQEVS V Sbjct: 418 AFFMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKV 477 Query: 515 DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFR 574 + ++ + F R ++ VL GE +VLGGL+DD + E V+KVPLLGDIPL+G LF+ Sbjct: 478 EGQTSLDV--VFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFK 535 Query: 575 YTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPV 634 T+ ++ KRNLMVFIRPTI+RD +S+ KY R EQ R D + +L+ PV Sbjct: 536 STADKKEKRNLMVFIRPTILRDGMAADGVSQRKYNYMRAEQIYR-DEQGLSLMPHTAQPV 594 Query: 635 LDENTFNSHA 644 L Sbjct: 595 LPAQNQALPP 604 >UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P193_AZOSE Length = 719 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 203/674 (30%), Positives = 315/674 (46%), Gaps = 52/674 (7%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 A A+++ NF NA+I ++ +G+ GK LIDP V+GT+++ +N S+ YQ Sbjct: 23 AVAAQDDTVSLNFANAEIDAVIKAIGKISGKNFLIDPRVKGTLNIVTNTPVSRDLSYQIL 82 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 LS L L GY+ + G K+V A+ K + G GD LVT++ + N A Sbjct: 83 LSALRLQGYTAVE-GPGVTKIVPEADAKLHGVPVGKEVLRGRGDSLVTQVFAMRNESATQ 141 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY 199 + ++R ++ + V + +NVL++T A + ++ +I VDV ++ L + Sbjct: 142 MLAVVRPLVSPNNT--VTAFPSNNVLVVTDYADNVARIARIIDSVDVPQG-DVHVLELRH 198 Query: 200 ASAEDLAEILNQLISESHGKSQM----PALLSAKIVADKRTNSLIISG-PEKARQRITSL 254 A+A DLA LN+L+++ G A ++V D RTNSL++ + L Sbjct: 199 AAAVDLAATLNRLMNDGTGNGSAANTADASQRVQVVPDARTNSLLVRTENPSRISALRQL 258 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD----- 309 + SLD GN V YLK A+AT + + L G +S + Sbjct: 259 VASLDRPG-AGGNIHVVYLKNAEATKVAQTLNGALAGDGSAPSATDSIASPSPLGASTPD 317 Query: 310 --------------------------NVAITADEQTNSLVITADQSVQEKLATVIARLDI 343 I AD N+L+I A +++ L VI LD Sbjct: 318 RMTTQGAGLTPATYRPSPESGNASDRGGMIQADPVNNALIIVAPEAIYRNLRHVIDLLDR 377 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT 403 RRAQV +EA+I E+ G+QW + N ++T N + Sbjct: 378 RRAQVYIEALIAEISTERAAEFGIQWQSANTPGAGSSSTFFGGTNFGGAGQNIIGAAQNI 437 Query: 404 SANPAWDMFSAYNGMAAGFFNG------DWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 + F G NG + +L L ++++ +IL+TPS+VTLDN+ A Sbjct: 438 GSVGKGMNFLLGGGTVKVPINGQMVEVFNLSLLARFLETDSRTNILSTPSLVTLDNEGAK 497 Query: 458 FNVGQDVPVLSGSQTTSGD-----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 VG+++P ++G T +G N F T+ER+ VG L+V PQ++EG A+ L+I QE S Sbjct: 498 IVVGRNLPFITGQYTNTGGGTTPANPFQTIERRDVGLTLEVRPQISEGGAIRLDIYQEAS 557 Query: 513 SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 SV + + + GPT N R+IQ+ VLV G + LGGL++D KVPLLGDIP G L Sbjct: 558 SVVPTLDDSAGPTTNKRSIQSTVLVDDGAIIALGGLVEDDYSSGEEKVPLLGDIPFAGSL 617 Query: 573 FRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 FRY + R K NL+VF+RP I+RD D Y +++ +Y +Q+ + Sbjct: 618 FRYDTRRRTKTNLVVFLRPVILRDRDSYSTITNARYDYIIGQQRNVAPPNALLHGERRPP 677 Query: 633 PVLDENTFNSHAPA 646 + T P Sbjct: 678 ELPAPGTPAPAVPV 691 >UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH25_DESMR Length = 685 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 181/626 (28%), Positives = 304/626 (48%), Gaps = 17/626 (2%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 A + NF+ D+R F++ + Q GK +ID +V+G ++V S S E Y+ Sbjct: 55 VAAPDDTAKTISINFDGVDLRAFIKYISQVTGKNFVIDDAVKGNVTVISPKPLSPAEVYK 114 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP--GVGDELVTRIVPLENV 135 F S+L++ GY+ + +N F+K+V + + + D D +VT+I+PL+N+ Sbjct: 115 VFESVLEVNGYTALPTEN-FVKIVPAKTSRARSMPVIDGRETVTNPADAVVTQILPLQNI 173 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ-QI 194 A +L L ++ G + + +N LI+T I ++I ++ ++D+ + + Sbjct: 174 RAGELRKTLAPLVSPD--GMLADFADTNALIVTDYRPNIQRIIGIVDQLDLSSAKATLHL 231 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 HL++ASA +++ L +L+S+S K +V ++RTN++I+ + ++ L Sbjct: 232 FHLKHASAAKISQKLEKLLSQSAAKEG-GGQTKISVVPEERTNAVIVLAEPQYVAQVKGL 290 Query: 255 LKSLDVEES-EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAI 313 L LDV E+GN VY L++A A NL +VL + K G+A K + Sbjct: 291 LAKLDVPNPMEQGNLHVYKLQHADAENLSKVLNELFTKGSTATGDAAKAQAPTVSGGFNF 350 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 AD+ TNSL++TA + V+ +LD R QV VEA+I+EV ++ GV N Sbjct: 351 VADKSTNSLLVTAAPEDFAFVDQVVKKLDAPRKQVYVEALIMEVSTDKSVSFGVNLNVAN 410 Query: 374 ----VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGV 429 +G ++ N A + Y +G A+ + Sbjct: 411 KQSGLGDGKYGGLLFASSNPAGYESLYNSSGAFVPPAGGSLGGLAFPVKIGEVIYSNLQA 470 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN--VFNTVERKTV 487 ++ A S+N +I+ATP ++TLDN+ A+ V ++ P L+ + + K V Sbjct: 471 MINASKSDNSFNIIATPQLMTLDNEEATITVAENRPYLTSQDVGQSTTDRPYQRFDYKDV 530 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS---NSTLGPTFNTRTIQNAVLVKTGETVV 544 GT LKVTPQ+NEGD++ L+++QE S +D + L PT R + ++ + GET+V Sbjct: 531 GTTLKVTPQINEGDSIKLKVKQETSRIDETVTKETGALQPTTRKRVTETTIMCRNGETIV 590 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 L GL+ E SKVP LGD+P+VG LF+ S + NL VFI P I L Sbjct: 591 LSGLIGKSRAEGNSKVPGLGDVPVVGWLFKNKSVADERTNLYVFITPRITAPGVDSDRLL 650 Query: 605 KEKYTRYRQEQQQRIDGKSKALVGSE 630 K ++ + + SK + + Sbjct: 651 HAKKMEIERQIEFNEEELSKPIRKAP 676 >UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF18_CELJU Length = 681 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 219/673 (32%), Positives = 360/673 (53%), Gaps = 36/673 (5%) Query: 1 MKGLNKITCCLLAALLM---PCAGHAENE-QYGANFNNADIRQFVEIVGQHLGKTILIDP 56 KGL T + + P + +A+ E + NFN+ DI++ ++ + GKTI+IDP Sbjct: 12 FKGLLLATLVAAGSAVWAQDPTSTNAQGEQTWTVNFNDTDIQEVIKFIAGATGKTIIIDP 71 Query: 57 SVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS 116 V+G I V ++ + +E Y+ FL+ LD+YG++ + N +++V + + + P + Sbjct: 72 KVRGPIKVINSKPLTSKEVYELFLASLDVYGFTAVESGN-IVRIVANRDARNLPIPTEKN 130 Query: 117 SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINK 176 D +T+++PL+N A + LR ++ G++ YEPSN LI+T + + + Sbjct: 131 VNVRD-DLYITQVIPLKNTSAAKILAALRPLVPQ--YGHLTTYEPSNALIITDTRANVAR 187 Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 + E++ ++D IG + +I L YA+A ++ +L QL + IVADKR Sbjct: 188 MNELVVQLDKIGITQTDVIPLRYANATEVVNMLTQLEKPDPNRG--MTTSPPVIVADKRI 245 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 N+++ISG + +RQR+ L+ LD +++ N RV YL+YAKA ++ +VLTG+ + + Sbjct: 246 NAVVISGDDMSRQRLKFLIDDLDRPQTKNANVRVVYLRYAKAEDVAKVLTGMMQSFTQSR 305 Query: 297 GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 ++ + AD TNS+++TAD + + +++ LDIRRAQVLVEAII E Sbjct: 306 QAEGAAPNTQQPG---VQADPATNSVLLTADVDTMDTMLSIVDSLDIRRAQVLVEAIIAE 362 Query: 357 VQDGNGLNLGVQWANKNVGAQQFTNTGLPI------------FNAAQGVADYKKNGGITS 404 V D +G LG++W ++ + + D K Sbjct: 363 VSDEDGKELGIEWMYRDDKYGFGASANGSRGSIGGIGSAVLAASDKNASQDDKDTALANL 422 Query: 405 ANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464 A+ + G D+ +L + S++K +IL+TPS++T DN A +VG+ V Sbjct: 423 ASGLSGLSGQMFGFGRLGERTDFLAVLKLMQSSSKTNILSTPSLLTTDNNQAVISVGRQV 482 Query: 465 PVLSGSQTTSG-------DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS 517 P +GS + G + F T+ R+ VG KL+VTP +NEGD+++L+I+QEVSS+ Sbjct: 483 PFRTGSYSAVGTGGNSTIGSPFTTINREDVGLKLEVTPHINEGDSIVLDIKQEVSSLSDV 542 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 S+ N R IQ +L GET+VLGGL+ D + +VP+LG IP++GQLFR + Sbjct: 543 SSEDGI-ITNKREIQTQILSSDGETIVLGGLITDEVQTGERRVPVLGSIPVLGQLFRSQT 601 Query: 578 TERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 + ++K NL+VFIR T++RDD V + EKY R+EQ + + LV ++PVL E Sbjct: 602 SSKSKTNLLVFIRATVVRDDKVLTGSTAEKYRLIREEQLNHVRNRGL-LVRKSEIPVLPE 660 Query: 638 NTFNSHAPAPSSR 650 + S P R Sbjct: 661 --WESRQPVIDLR 671 >UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Marinomonas sp. MED121 RepID=A3YCA1_9GAMM Length = 616 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 191/634 (30%), Positives = 324/634 (51%), Gaps = 22/634 (3%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 + + L+ +L M A + + N ADI F+ V + ++ ++DP V+G ++ Sbjct: 5 VRRQLLKLIVSLCMLIPLLAIGKTWQVNLQQADISIFIRQVAEMTDRSFIVDPRVKGKVT 64 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 V SN + + ++ FLS+L ++GY+V+ GF K++ K G+ D S G+ Sbjct: 65 VISNASLDEDAVFRLFLSVLTVHGYAVLESPEGF-KILPQNIAKQ-GGLNFDPSGGAPGE 122 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 +VTR++ ++N A +L P+LR ++ G++ N LI++ A I L ++++R Sbjct: 123 LMVTRVLAIKNAVAAELVPILRPLIPQ--YGHLAAVPTMNALIISDHADNIRSLEDLVER 180 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 +D + +I L++A A D+ +L +L + + GK + + IVAD+RTN LI+ G Sbjct: 181 LDSTIEGEMAVIPLKHAWAGDVITLLQELTTTTTGKGARSSDV-TTIVADERTNRLILKG 239 Query: 244 PEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS 303 +I L+ LD+ + + L+YA AT + ++L GV ++ ++GNA Sbjct: 240 KPGELNQIKDLIIKLDIPAEKTSRLQYIPLQYADATKVADLLKGVVGDIEKKEGNAPTLE 299 Query: 304 SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGL 363 ++ I ADE N+L++ ++ V ++ +V+ ++D+ RAQVL+EA+IVE+ + Sbjct: 300 TN-------IQADEDLNALLVNSEPGVMSEIYSVLKQIDVPRAQVLIEAVIVEITVTDEE 352 Query: 364 NLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 LGVQW ++A +A + + Sbjct: 353 ELGVQWLIGGSDEIISGTNFTSAGSSANTIASSINSSTANTLATGGTAILG--------- 403 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVE 483 + ++G ++ AL S +++L+TP I+TLDN+ A VG+ P +G + D+ F T Sbjct: 404 DTNFGAIIQALQSKTNSNLLSTPKILTLDNQEARILVGETRPFQTGEYSEDSDSTFVTTS 463 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETV 543 R+ VG LKVTP +N G+ V +E+ Q V S S S LG R ++ V+ +T+ Sbjct: 464 REDVGLTLKVTPHINSGNEVKMEVFQTVES-ASDEASDLGTITTVREVETVVIAGDRQTI 522 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 VLGGL+ D E KVP LGD+P VG LFR +S K+NL+VFIRPTIIR + Sbjct: 523 VLGGLIQDNITESKQKVPFLGDLPFVGGLFRSSSFSIDKKNLLVFIRPTIIRGKAKADQI 582 Query: 604 SKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 + +Y +R + Q + L G + + DE Sbjct: 583 TNTQYQGFRAVEIQMSAPRDGGLEGLFEPELSDE 616 >UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gammaproteobacteria RepID=B4SL34_STRM5 Length = 793 Score = 461 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 203/697 (29%), Positives = 313/697 (44%), Gaps = 70/697 (10%) Query: 1 MKGLNKITCCLLAALLM--------PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTI 52 M+ + + C AL++ A A +E N DI + + + G+ Sbjct: 1 MRVMRSLACSTALALVVGMAHVPAPVLAQDARDEPVQLNLVETDIGGVLRMAARFTGRQF 60 Query: 53 LIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGM 112 L+DP V G ++V S+ S+ + YQ L L + G++V+ +VV A+ K + Sbjct: 61 LVDPRVTGKMTVVSDGPVSRTQAYQLLLGALRMRGFAVVENGGVS-RVVPQADAK---LL 116 Query: 113 IADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAS 172 G G E+ TR L A L +LR M+ + + +N L++T A Sbjct: 117 GGRVGAGGAGGEVATRTFALRYENAAALVAVLRPMISPDNP--ITANPGNNTLVITDYAD 174 Query: 173 TINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVA 232 + ++ VI VD ++ L+ A D+A ++ L+ + ++A Sbjct: 175 NLERIARVIASVDTPAGMDTDVVKLQQGIAVDVAAMVAPLLDAQGAE----PNQKVVVMA 230 Query: 233 DKRTNSLIISGPEKARQR-ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEK 291 D R+NS+++ R R L++ LD + E GN V YL+ A+A L VL GV Sbjct: 231 DPRSNSVLLRSSSPGRTRLARQLVEKLDKAQDESGNLHVVYLRNAQANQLAGVLRGVVAG 290 Query: 292 LKDEKGNAR----------------------------------------------KPSSS 305 D S+ Sbjct: 291 QSDAPAMGSNEGITPLPGDANRSTPAQPSQPQQAKTGGNALESQRLDPNRRDPIDAGSTG 350 Query: 306 GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 + + +++ AD TN+L+I+A + V L VI +LD RRAQVLVE++IVEV + L Sbjct: 351 FSQNGISVQADVATNTLLISAPEPVYRNLRRVIDQLDQRRAQVLVESLIVEVNQTDAAEL 410 Query: 366 GVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 GVQW N T+ G + A + + + Sbjct: 411 GVQWMLGNGRTFGGTHFGGTNGGSGLNTAARTTLDVLPKDGLKIGVIDGTINLPGVGQIL 470 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD----NVFNT 481 + L AL S +IL+TP+++TLDN+ AS VGQ VP +SG T G N F T Sbjct: 471 NMKALANALQSKGGANILSTPNLMTLDNEAASIMVGQTVPFVSGRYVTDGGGGSNNPFQT 530 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD-SSSNSTLGPTFNTRTIQNAVLVKTG 540 + R+ VG KL+V PQ++EG V L+I QEVSS+D S+NST+G N R + +VL+ G Sbjct: 531 IVREDVGLKLRVRPQISEGGTVKLDIYQEVSSIDAQSANSTVGIITNKRALDTSVLLDDG 590 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 + +VLGGLL+D VP LG IP++G LFR + +RAK NLMVF+RP ++RD Sbjct: 591 QIMVLGGLLEDSVSHGRDAVPGLGKIPVLGALFRSDTRKRAKTNLMVFLRPHVVRDPAAG 650 Query: 601 RSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 + L++++Y R Q +S AL + + Sbjct: 651 QRLTRDRYDYMRNAQAGTQPVQSWALPALSAPQLPPQ 687 >UniRef50_A8ZWZ5 General secretion pathway protein D n=2 Tax=Desulfobacteraceae RepID=A8ZWZ5_DESOH Length = 799 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 174/651 (26%), Positives = 302/651 (46%), Gaps = 17/651 (2%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 +P A +FN+ D+ F++ + + GK ++D +V+ ++V S Sbjct: 67 LPEGLPTAADDGENLVSVDFNDVDLAVFIKFISEVTGKNFVLDQNVRTKVTVISPSKIPV 126 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIA-DSSRPGVGDELVTRIVP 131 +E Y+ F S+L++YG++ + + +KVV++ + ++ D+LVT+I+P Sbjct: 127 EEAYRVFESVLEVYGFATVEAGD-IIKVVKAGDARSKSIETGLVKEGRAPDDKLVTQIIP 185 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG-TE 190 L A ++ L ++ SV ++ Y +N+LILT S I +L+ ++ +DV G Sbjct: 186 LRYADANEIKGLFTPLVSKDSV--LLAYPSTNMLILTDAYSNIQRLMRILDAIDVTGIGR 243 Query: 191 KQQIIHLEYASAEDLAEILNQLI------SESHGKSQMPALLSAKIVADKRTNSLIISGP 244 + +I LEYA A + IL + + ++VAD R N +I+ Sbjct: 244 QVSVIPLEYADASKMVSILEVVFREAVDRGGPPQRGGTEPTDKIRLVADDRANVVIMLAS 303 Query: 245 EKARQRITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS 303 E +I L+ LD + + + VYYLK A A L +VL + EK D +K + Sbjct: 304 ESETVKIRKLITLLDKKVQQGKERIHVYYLKNADAEELAKVLQMLPEKQGDATAEGKKLA 363 Query: 304 SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGL 363 + ITAD TNSL+I A++ L +I +LDI R+ V +E +I EV Sbjct: 364 -PVLSKAINITADASTNSLIIMAERDDYLVLKEIIEKLDIPRSMVYIECLIAEVNINKDF 422 Query: 364 NLGVQW---ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 LG +W + + + G A+ + + A + + Sbjct: 423 ELGAEWLVGGKGSYDDKDGGYAVGFGGGSDTGYANVARMAMGGLPSGFSVGAMAESIVVG 482 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN 480 G + ++ A + IL+TP I+T DN+ A+ VG+++P L+ TTS + ++ Sbjct: 483 GIEYPNLAAVVRAFKKDKDVQILSTPQIMTTDNQEATITVGKNIPYLTKIGTTSSEETYS 542 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTIQNAVLVKT 539 E K VG LK+ PQ+NE + L+IEQE++ +D + +L P R I V+V Sbjct: 543 NYEYKDVGISLKIKPQINENRLIRLDIEQELTKLDQLTTVSLDRPATLKRGITTNVIVHD 602 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 T+V+GGL+DD KVP LGDIP +G LF+ S K NL+VF+ P +I+ Sbjct: 603 EHTIVIGGLIDDSMSRVEYKVPCLGDIPFLGWLFKGLSRSSEKTNLLVFLTPHVIKTARE 662 Query: 600 YRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAPSSR 650 ++ ++K + A + + V ++ ++ + + Sbjct: 663 ADNIYQQKQGDLDAVRGGSFSLYPDAREDASAIDVTPVSSSDTTPADDAHQ 713 >UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDL7_ACIJO Length = 785 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 210/685 (30%), Positives = 333/685 (48%), Gaps = 53/685 (7%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 + A LL + + + + N +AD+ F+ V GK +DP V+G ++V S Sbjct: 10 WALTIAAPLLAMVSTASYAQTWKINLRDADLTAFINEVADITGKNFAVDPRVRGNVTVIS 69 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 N ++QE Y FL +L++ G I +K+V +NVK+S D GD++V Sbjct: 70 NKALNKQEVYDLFLGVLNVNGVVAIPSG-RTIKIVPDSNVKSSGIP-YDVRHRATGDQVV 127 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 TR++ LEN A DL P LR +M ++ +N LI++ RAS I +L +I+ +D Sbjct: 128 TRVIWLENTNANDLIPALRPLMPQ--FAHLSAVNGTNALIVSDRASNIYQLETIIRNLDG 185 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 G + + L+ + AE++ +L + K + +I+AD RTN +I+ G Sbjct: 186 TGQNDIEAVSLQSSQAEEMIGLLESMSGTGSIKDLKGS--RIRIIADNRTNRIILKGDTA 243 Query: 247 ARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS-- 303 R+RI +++ LDV +E G +V+ LKYA A +L E+L G+ + + Sbjct: 244 TRKRIRQMIEMLDVPAAERLGGLKVFRLKYASAKSLSEILQGLVSGQAVNSSQSNDSNNN 303 Query: 304 -------------------------------------SSGAMDNVAITADEQTNSLVITA 326 +S + V+I AD N+LV+ A Sbjct: 304 SNSSYNQSNSASEGSSSQISTPSINLNSQSNRNQNNITSFNSNGVSIIADSSQNALVVKA 363 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA----NKNVGAQQFTNT 382 D + ++ + I +LD RR QVL+EA I+EV+ + LGVQWA + VG F N Sbjct: 364 DPQLMREIESAIQQLDTRRQQVLIEATILEVEGNDADQLGVQWAMGDLSSGVGIINFDNI 423 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDI 442 G + + A G ++ + + +G ++ AL SN K+++ Sbjct: 424 GSSLKSIAANYLTGGGAGAASAIGAGGSLILGDYKEGSDGSRQLYGAMIQALKSNTKSNL 483 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVTPQVNE 499 L+TPSIVT+DN+ A VG++VP ++GS +T+ N + T+ERK VG LKV P + E Sbjct: 484 LSTPSIVTMDNEEAYIVVGENVPFVTGSVSTTSSGTANPYTTIERKDVGVTLKVVPHIGE 543 Query: 500 GDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSK 559 G + LEIEQEVS V ++ + R I+ +VL + G T+VLGGL+ D + Sbjct: 544 GGTIRLEIEQEVSDVKANKGQAQDLVTSKRAIKTSVLAEHGNTIVLGGLISDNTSYSRQS 603 Query: 560 VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRI 619 +P LG IP +G+LFR KRNL+VFI PTI+ D + R LS+++Y++ Q Sbjct: 604 IPGLGAIPGLGRLFRSDGKSDQKRNLLVFIHPTIVGDGESARRLSQQRYSQLYSLQLAMD 663 Query: 620 DGKSKALVGSEDLPVLDENTFNSHA 644 S A + V + + Sbjct: 664 KDGSFAKLPENVDDVFQQRLPVTPT 688 >UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Proteobacteria RepID=A9IRR4_BORPD Length = 862 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 201/701 (28%), Positives = 315/701 (44%), Gaps = 84/701 (11%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY 75 ++ NF + DI + + + L+DP V+G +++ S + Sbjct: 24 PALAQARPADQHVSLNFVDTDIPAVLRALSLFTQRNYLVDPRVKGKLTLVSERPVDRDTA 83 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTS--------------PGMIADSSRPGV 121 L + G++++ +D +VV A+ K P +AD +R Sbjct: 84 LTMLAGALRMQGFAIVEVDG-VTRVVPEADAKLQGSAVVADAARGAAGPMPMADFARGAR 142 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 G E+VTR+ L+ A +L P+LR ++ + + Y +N L++T A + ++ VI Sbjct: 143 GSEVVTRVFSLKYENAANLLPVLRPLVPPNNP--INAYPGNNTLVVTDYADNLERIARVI 200 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 +VDV ++ ++Y A DLA + QL+ G + +VAD RTNS+++ Sbjct: 201 AKVDVPSAIDTDVVPVKYGVASDLASLATQLLDAQGGDTAQ----RIAMVADPRTNSVLV 256 Query: 242 SGPEKARQR-ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK------- 293 AR R L++ LD E++ GN V YL+ A+A+ + EVL G+ Sbjct: 257 RAGSPARTRLARDLIRKLDSEQARPGNLHVVYLRNAQASRMAEVLGGLLASQALNGAGRE 316 Query: 294 -------------DEKGNARKPSSSGAMDN------------------------------ 310 G A P +SG Sbjct: 317 GGGAGGSAMGVAGRAGGRASAPRTSGTPVGMASGSSGSSGGGAFNQQPIERDDDGAGDAV 376 Query: 311 ------VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN 364 + AD TN+L+I+A + + L VI +LD RRAQVLVE++IVEV Sbjct: 377 SYSGGGATVQADPSTNTLIISAPEPLYRSLREVIDQLDQRRAQVLVESLIVEVSQEKAAE 436 Query: 365 LGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM-AAGFF 423 G+QW G + + + + + + G Sbjct: 437 FGIQWMTGAGSLDGSGFIGGTNLGGSGIGSAGTGATTLDALGRGLTLGLVKGTVDVLGNQ 496 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG----DNVF 479 + VL AL ++ + +IL+TP+++TLDN+ AS VG+ VP ++G TSG +N F Sbjct: 497 VINLNVLARALQNSGEANILSTPNLLTLDNEPASILVGKTVPFVTGQYVTSGSAGSNNPF 556 Query: 480 NTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS-SSNSTLGPTFNTRTIQNAVLVK 538 T+ER+ +G KL + PQ++EG AV L+I QEVSS+D SS+ T G N R I +VLV Sbjct: 557 QTIEREDIGLKLNIRPQISEGGAVKLDIYQEVSSIDEASSSETTGLVTNKRAIDTSVLVD 616 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 G+ +VLGGLL+D S VP L IPL+G LFRY +R K NLMVF+RP ++RD Sbjct: 617 DGQIIVLGGLLEDRVTSTTSAVPGLSSIPLLGALFRYDKRQRTKSNLMVFLRPFVVRDAR 676 Query: 599 VYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENT 639 +++ +Y R+ Q Q GK L + + Sbjct: 677 DSANVTLNRYDYMRRAQSQAQPGKHWLLPDVQAPLLPPARV 717 >UniRef50_A1U289 General secretion pathway protein D n=4 Tax=Gammaproteobacteria RepID=A1U289_MARAV Length = 649 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 200/638 (31%), Positives = 328/638 (51%), Gaps = 12/638 (1%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 K L + A+ E + N +ADIR FV V G + ++DP V+G Sbjct: 5 KINLLQAIMFALLLPLASLAQAQEETWRLNLKDADIRAFVTQVADITGYSFVVDPRVKGK 64 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 ++V S+ ++ E Y FL++L+++G++ I +K+V+ + K S + + Sbjct: 65 VTVLSSAPMNKDEIYDLFLAVLNVHGFTAIP-GEEVVKIVQQVDAKQSAENLNRFPQTPS 123 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 ++L+TR++ ++N A +L P+LR ++ G++ +N LI++ AS I ++ +++ Sbjct: 124 -EQLITRVIQIDNANALELVPILRPLVAK--YGHLAGVAAANALIVSDHASNIARIEQIV 180 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGK-SQMPALLSAKIVADKRTNSLI 240 + +D + ++I L+ A D+ +L +L E G+ A + AD+R+N LI Sbjct: 181 RELDSPSKYEVEVIQLQEAWVGDMVTLLQELAPEELGRAGGENAARKYSVTADERSNRLI 240 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 + G E R ++ L+ LD + G T+V L++A A L E+L GV ++ E Sbjct: 241 LRGDETFRDKMRGLILQLDQPSASGGTTKVIRLRHADAKTLTEILKGVMGEVVKEGSAGG 300 Query: 301 KPSSSGAMDNV--AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 S ++ ADE N+LV+ D S+ ++ ++A+LD+RRAQV++EA IVE+ Sbjct: 301 SSGGSAGNPGSSFSVFADEGLNALVVRGDPSLMQEAEQIVAQLDVRRAQVMIEAAIVEIS 360 Query: 359 DGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM 418 D G LGVQ A + A F G + + V G + G Sbjct: 361 DELGDQLGVQLAAGDESAGSFPVLGTNLTSGQGMVGLNSVIGALVGDTIPQLAGGLTVGA 420 Query: 419 AAGFFNG-DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG-- 475 +G WG+L+ AL+S++ ++L+TPSI+TLDN+ + VGQ+VP +G T +G Sbjct: 421 GQRDEDGVTWGLLIQALSSSSAANLLSTPSIITLDNQESEIIVGQNVPFRTGQSTVTGDG 480 Query: 476 -DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-NSTLGPTFNTRTIQN 533 N F T+ER+ VG LKVTP ++ V L +EQ + ++S + N R I+ Sbjct: 481 TTNPFTTIERRDVGLSLKVTPTISADGLVRLVVEQTTEDISTTSVDGASDLITNKREIKT 540 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 VL GETVVLGGL+ D + SKVPLLGDIP++G+LF S R KRNL+VF+RPTI Sbjct: 541 TVLADDGETVVLGGLIKDDYQVSKSKVPLLGDIPVLGRLFSSESETRVKRNLLVFLRPTI 600 Query: 594 IRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED 631 + + + EK+ R + + S+ Sbjct: 601 MLGKADAVAATTEKFNRLWDVNLEVREKLGLPQEESDP 638 >UniRef50_C7HZF2 General secretion pathway protein D n=1 Tax=Thiomonas intermedia K12 RepID=C7HZF2_THIIN Length = 884 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 207/706 (29%), Positives = 316/706 (44%), Gaps = 81/706 (11%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A + N N NADI V+ V G+ ++DP V+G ++++ Q+ +Q Sbjct: 50 QAKRSANGDLTINLVNADIASAVQAVAAATGRNFIVDPRVKGQVTIQFEKPVPPQKVFQA 109 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMI----ADSSRPGVGDELVTRIVPLEN 134 L+ L L G++V+ D +VV A+ K G + A S PG GD++VT+I L N Sbjct: 110 LLTQLRLAGFAVVEHDG-VFQVVPEADAKLQSGPVGVGLAPSRIPGRGDQVVTQIFQLRN 168 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 A L P+LR ++ + NV N L++T A + ++ +I +DV + + Sbjct: 169 ASASSLLPVLRPLISPNNTINVS--PSGNALVVTDYADNLKRIARIIAALDVPTGTEVTV 226 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAK------------IVADKRTNSLIIS 242 + L YA A DLA L +LI S P + I+ + +NSLI+ Sbjct: 227 VPLTYAVASDLAPTLQKLIDMQTVTSSGPGTPGVQAAVAGSGAMRAVILPETASNSLIVR 286 Query: 243 GPEKA-RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 A I +++ LD ++++ N V YL+ A A +L L GV + Sbjct: 287 ATNGAQLAEIEQMIRRLDRPQNDQDNIHVVYLRNANAADLARTLRGVLAAQGTGSAAGGQ 346 Query: 302 P---------------------------------------------SSSGAMDNVAITAD 316 S+ + AD Sbjct: 347 SQVKPQGGSQSMSGGSNNSNSSSYGSSGATSPGLGQAPEFAATSSDSTVTLPQGGTVYAD 406 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA 376 N+L+I A Q V +L VI RLD+RRAQV VEA+I EV LG+QW A Sbjct: 407 NSLNALIINAPQPVYMQLRRVIERLDVRRAQVYVEALIAEVDANKAAQLGIQWQAIAGSA 466 Query: 377 Q------QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG----- 425 +N G N A G + A + NG+ G + Sbjct: 467 GNQNAIIGGSNYGTGGSNIINLQAAISGGGSSAATALASGSLAIPNGLNIGILHNVAGMA 526 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ----TTSGDNVFNT 481 G+L L + + +IL+ P+++TLDN+ A VGQ+VP ++G +++ F T Sbjct: 527 TLGLLANFLQTQDGANILSAPNLMTLDNEEAKIVVGQNVPFVTGQYAQTGSSATVTPFQT 586 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGE 541 +ERK VG LKV PQ+ G A+ +++ QEVSS+ S++N+ N R+IQ AVLV G+ Sbjct: 587 IERKDVGLTLKVRPQITAGGAIKMDVYQEVSSISSTTNAAGI-ITNKRSIQTAVLVNDGQ 645 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 T+VLGGL+ D + SK+P LGDIP +G LFR S K +LMVF+RP ++R +D Sbjct: 646 TIVLGGLMQDNVSQNNSKIPGLGDIPGLGALFRSNSRTAQKTDLMVFLRPIVVRTEDQGN 705 Query: 602 SLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAP 647 +LS+++Y R Q + + + AP P Sbjct: 706 ALSQQRYDTMRGMQDRAQLPAQFGMPEMPGPVLPSLQGDTGAAPTP 751 >UniRef50_Q1N1M8 Type II secretory pathway, component PulD n=1 Tax=Bermanella marisrubri RepID=Q1N1M8_9GAMM Length = 640 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 203/618 (32%), Positives = 336/618 (54%), Gaps = 20/618 (3%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK + LL + A A++E + N +ADI+ F+ V G + +IDP V+G Sbjct: 12 MKIRTYLAIALLLLSMPFQALAADDETWKVNLKDADIKAFITQVANITGYSFVIDPRVKG 71 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 +++ S+ +Q E Y+ F S+L ++G+S I + +K+V+ + K GM + P Sbjct: 72 KVTIVSDTPMTQNEVYEMFQSVLAVHGFSAIPAGH-IIKIVQQNDTKQEGGMPTTVNAPQ 130 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 ++++T+++ +++ PA DL P+LR M+ G++ + +N LI+T AS + +L ++ Sbjct: 131 S-EQMITQVIQIKDTPALDLVPILRPMVAK--YGHLAGVKSANALIVTDHASNVRRLEKI 187 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQL-----ISESHGKSQMPALLSAKIVADKR 235 I+R+D G + +++ LE A D+ +IL L + ++VAD+R Sbjct: 188 IQRLDGSGVSELEVVQLEEAWVGDIVDILTNLDPDKVSEGGKAREASGVAGRIRVVADER 247 Query: 236 TNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE 295 N LII G + AR+R+ L+ +LD G V L++A + L E+L + +KD+ Sbjct: 248 ANRLIIQGEQSARERVKELIATLDRPSKFSGKASVIRLQHADSEELAELLKNLMGDVKDD 307 Query: 296 KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 KG ++ S V+I AD N+LV+ A+ SV ++ ++ LD+RRAQVL+EA IV Sbjct: 308 KGKSQAGGS------VSIHADTGLNALVVRAEPSVMSEIKEIVTELDVRRAQVLIEAAIV 361 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 EV +GVQ A + + NA ++ GI + PA Sbjct: 362 EVTGQVDDRVGVQTAALDQETGETPLVATDFANAGTSISQLIT--GIATGQPAISSGLTL 419 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG 475 G+ + ++ L+ AL S + ++L+TPSI+T+DN A VGQ+VP ++GS +++ Sbjct: 420 GGVGQN-GDTEFAFLVQALESVSNANLLSTPSIMTMDNHEAEIIVGQNVPFVTGSTSSTS 478 Query: 476 DN-VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS-SNSTLGPTFNTRTIQN 533 ++ F T++R+ +GT LKVTP V +G V L +EQ SV + N R+IQ Sbjct: 479 NSNPFTTIKREDIGTTLKVTPHVQDGKFVRLSVEQSTESVAPTAVEGQADLITNKRSIQT 538 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 +L + GE V+LGGL+ D +E SKVP LGDIP++G LFR TS R K+NL+VF++PT+ Sbjct: 539 QILAENGEIVMLGGLIRDAVQESESKVPFLGDIPIIGWLFRSTSESRVKQNLIVFLKPTV 598 Query: 594 IRDDDVYRSLSKEKYTRY 611 + D + + + KY Sbjct: 599 VLDKADNKKILRRKYDGI 616 >UniRef50_A4BES0 Type II secretory pathway, component PulD n=1 Tax=Reinekea blandensis MED297 RepID=A4BES0_9GAMM Length = 653 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 197/646 (30%), Positives = 345/646 (53%), Gaps = 28/646 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 M G+ + LL + A+++ Y N ADI + +++V + G+T +IDP V+G Sbjct: 3 MSGMFRNVILACCLLLTTVSVFADDQTYTLNMQEADITEVIDLVAKVTGRTFIIDPRVRG 62 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 ++V S+ ++ + Y+ FL+ L++YG+S + + K++ +++K++ + Sbjct: 63 KVTVISDKEMTKSQIYETFLATLEVYGFSAVQAGD-VTKIIGQSDIKSAGIEVETQGG-R 120 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 VG+E++TR+ P++N A +L P+LR M+ + G++ +NVLI+ RA+ I++L E+ Sbjct: 121 VGEEIITRVFPIQNASAMELVPILRPMV--ANYGHLAGVPSANVLIVADRATNIDRLSEI 178 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAK----IVADKRT 236 + +D G+E+ ++++L++A + +L ++ + A + +V D+R+ Sbjct: 179 VYLLDKAGSEEIEVVNLQHAWVGAMITLLERISPTAVAAGNQGARSGSNRTVTLVGDERS 238 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 N +I+ G +ARQ+I L++ LD E + +V +L A A + E+L G++ + Sbjct: 239 NRIIVKGETEARQQIIELIQKLDTPSQENASYKVIFLNNADAVKMAEILKGIASTSQGAS 298 Query: 297 GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE 356 G PS +++ ADE+ N+L++ A+ S ++L ++I++LDI R QVL+EA IVE Sbjct: 299 GQNEPPSQP-----ISVLADEEQNALIVRAEPSDMKELESIISQLDIPREQVLIEAAIVE 353 Query: 357 VQDGNGLNLGVQWANKN---VGAQQFTNTGLPIFNAAQGVADYKKNGGIT--SANPAWDM 411 V + LGVQWA F + + A+ G GI+ +P + Sbjct: 354 VTGNDTDTLGVQWATNPEVVQDGVPFLSVSSEVAGASVGNLAQSVGQGISQAGGSPLGAL 413 Query: 412 FSAYNGMAAGFFNG-----DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 S G G + D+GV + AL S + + L+TPSI+TLDN A VG VP Sbjct: 414 TSVPAGTFMGLADPFGNRVDFGVAIQALESASNTNFLSTPSILTLDNSEAVITVGNSVPF 473 Query: 467 LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN-STLGPT 525 +G + DN F T+ER+ VGT L V P + + + LE++Q V SVD + + Sbjct: 474 KTGG-SGDEDNPF-TIERQDVGTTLTVIPHIQQNGTIRLEVDQIVESVDETVSYDASDVV 531 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 R + VLV +GET+VLGGL+ D E S+VP+LG IP++G LF+ ST + K NL Sbjct: 532 TKKRQVTTQVLVNSGETIVLGGLIQDQVSELESRVPVLGYIPIIGHLFKSKSTLKTKTNL 591 Query: 586 MVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED 631 ++ ++P++I D+ + + + + Q I +S S D Sbjct: 592 LIILKPSVIEDNMD--EIRANRLNGVWELRIQTIKDESSIQQPSVD 635 >UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gammaproteobacteria RepID=Q31J27_THICR Length = 703 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 221/667 (33%), Positives = 343/667 (51%), Gaps = 50/667 (7%) Query: 1 MK--GLNKITCCLLAALLMPCAGHAENEQYGA--NFNNADIRQFVEIVGQHLGKTILIDP 56 MK L C + ++ +++E+ NF ADI + +E V + GK +IDP Sbjct: 1 MKNVKLILWFCLMGLSINGHAQPESQSEEVTLKQNFQQADIEKVIEAVAKLTGKNFIIDP 60 Query: 57 SVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS 116 V+G +++ + + ++ Y+ L+IL ++GY I ++++ + + S Sbjct: 61 RVKGKVTLIAPEAMPPEDLYETLLAILHVHGYVAIP-GKTAIQIIPANLARDQVPYENPS 119 Query: 117 SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINK 176 ++ + VT ++ +E VPA L +LR ++ G++V SN +I+T S I + Sbjct: 120 AQQS---DWVTEVITIEKVPATKLVAVLRPLVARE--GHLVALSESNRMIVTDSQSNIAR 174 Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 L +VIKRVDV + ++I L +ASAE++ ++ +++S+S K + D+R+ Sbjct: 175 LKQVIKRVDVDESSGYEVIKLSHASAEEMMLVIKKVMSKSANKQ-------FNVSFDERS 227 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 N +I+SG + R+ + +L+ LDV EG +V YL YAKA LV VL ++ Sbjct: 228 NRVILSGDQDTRREMRALIADLDVSVPSEGRVQVIYLHYAKAAELVPVLQKIATNRSLLS 287 Query: 297 GNARKPSSS--------------------GAMDNVAITADEQTNSLVITADQSVQEKLAT 336 + +S ++I A+E+ N+++I+A V L T Sbjct: 288 SVSSDAKTSEATIPDATGNGVQVNQLDDKTLKSRISIEAEERMNAIIISAPPGVVSVLKT 347 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADY 396 VI +LDIRRAQVL+EAI+VEV + LGV+W N I Sbjct: 348 VIKQLDIRRAQVLIEAILVEVTETKQAELGVEWGAAGPNGVGLINFSGTIPTIIGNA--- 404 Query: 397 KKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLA 456 G + A WG L+ AL S+++ +IL+TP+++TLDN+ A Sbjct: 405 ---GNPAAQANAIGTGVNAAFGEVSADGTGWGALIRALNSDSEANILSTPTLLTLDNEEA 461 Query: 457 SFNVGQDVPVLSGSQTTSGD-----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 VG++VP +GS T++G N FNT+ERK VG LKVTPQ+NEGD V LEI QE+ Sbjct: 462 EIVVGKEVPFQTGSYTSTGTSSTPTNPFNTIERKNVGLSLKVTPQINEGDEVFLEINQEI 521 Query: 512 SSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 S V ++ + R I+ V+V G +VLGGLL + E KVP LGDIP +G Sbjct: 522 SDVIPKGDAVDV-QTSKRQIKTRVIVGDGNVIVLGGLLTEKETEVEKKVPGLGDIPGLGA 580 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVG-SE 630 LFR TS ER K NLMVF+RP I+RD+ + S++KY+ R EQ Q + S L G Sbjct: 581 LFRSTSNEREKVNLMVFLRPVIVRDNKMGTYYSRKKYSLIRNEQTQLLKKDSGLLEGLRP 640 Query: 631 DLPVLDE 637 +P L++ Sbjct: 641 RMPTLEQ 647 >UniRef50_Q221L0 Type II and III secretion system protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221L0_RHOFD Length = 702 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 203/664 (30%), Positives = 306/664 (46%), Gaps = 36/664 (5%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 L A E NF+NADI + G +++DP V+GT+++ ++ S++ Sbjct: 34 LAQASAVSKPGEAVTLNFSNADIEAVARTMATITGTNVVVDPRVKGTLTLVTDKPVSRRA 93 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP---GVGDELVTRIVP 131 F + L L G++++ KVV A+ K G + S +G+++ T+I Sbjct: 94 AMNQFQAALRLQGFTMVESAG-LYKVVPEADAKLQSGAVTVSDEAIGGALGNQITTQIFK 152 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 L A +L +LR ++ + NV +N L++T A + ++ +I VDV Sbjct: 153 LNFESANNLVAVLRPLISPNNTINV--NPGTNSLVITDYADNLRRMARIIAAVDVSNATD 210 Query: 192 QQIIHLEYASAEDLAEILNQLISE---SHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 +I+ L++A A DLA ++ +L+ Q +VA+ R+N+LI+ AR Sbjct: 211 VEILPLKHAIATDLAPLVLRLVESSAAGTAPGQADTSFKTILVAEPRSNALILRAANPAR 270 Query: 249 -QRITSLLKSLDVEES-----EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 + SL+ LD + E GN V YLK A AT L L Sbjct: 271 VALVKSLVDKLDQPAAPGLNGEAGNIHVVYLKNADATKLAATLRAAMTGQAPAAAAPGVA 330 Query: 303 SSSG--------AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 +++ + I AD TNSL+ITA + +L VI RLD RRAQVLVE++I Sbjct: 331 AAATVAVVAATQSTTGGQIQADVATNSLIITAPEPQYRQLRAVIDRLDGRRAQVLVESLI 390 Query: 355 VEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA 414 VEV G+QW A L A G G + P + Sbjct: 391 VEVNADRAAEFGIQWQGPLGKAGDGVIGLLGTNFGAAGKNIINLATGAGAVAPGAGLNFG 450 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 G + + L ++ ++L+TP+++TLDN+ A +G++VP ++GS T++ Sbjct: 451 AVQRTNGVYVLGFLA--NFLETSGSGNVLSTPNLLTLDNEEAKIVIGENVPFVTGSYTSN 508 Query: 475 GD-----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSSNSTLGPTFNT 528 N F TVERK VG LKV PQ+NE V + I QE S+V + GPT + Sbjct: 509 NTSGASVNPFTTVERKDVGLTLKVKPQINEDGTVKMVIYQETSAVKAGTEKDANGPTTSK 568 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 RTI++ VLV G VVLGGLL D KVP LGD+PL G LF+ + R K NLMVF Sbjct: 569 RTIESTVLVDDGSIVVLGGLLQDKYSGNQDKVPGLGDVPLFGNLFKSEARTRNKTNLMVF 628 Query: 589 IRPTIIRDDDVYRSLSKEKYTRYRQ--EQQQRIDGKSKALVGSEDLPVLDENTFNS---H 643 +RP ++RD LS ++Y R Q + + + + LP L + Sbjct: 629 LRPVVVRDAHASDQLSMDRYDLMRSGMNAAQPVASQLVPINEAPQLPALPGSQPAVQRLQ 688 Query: 644 APAP 647 P P Sbjct: 689 PPEP 692 >UniRef50_Q48JN3 General secretion pathway protein GspD n=2 Tax=Pseudomonas syringae group genomosp. 2 RepID=Q48JN3_PSE14 Length = 778 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 183/681 (26%), Positives = 311/681 (45%), Gaps = 68/681 (9%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ NF ADI+ V + + G+ L+DP V GT+++ S + + Y+ ++ L Sbjct: 94 DQLIQLNFVEADIQSVVRALSRSTGQQFLLDPKVTGTLTLVSEGSVPASQAYEMLMAALR 153 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 + G+SV+ + VV + + G + + +P G+ ++TR L+ A +L P+L Sbjct: 154 MQGFSVVDVGG-VAHVVPEDDARLLGGPVYSADKP-SGNGMLTRTFRLQYENAVNLIPVL 211 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 R ++ + + Y +N +++T A + ++ ++I +D ++ + A D Sbjct: 212 RPIVSPNNP--INAYPGNNTIVVTDYADNLVRVAQIIDGIDTPSAIDTDVVTVHNGIAVD 269 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS-GPEKARQRITSLLKSLDVEES 263 +A ++++L+ G A ++ D R+N++II G + + +L+ LD +S Sbjct: 270 IASMVSELLDTQGG----DATQKISVIGDPRSNAIIIRAGSPERTELARNLIYKLDNAQS 325 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG-------------------------- 297 N V YL+ A+A L + L G+ D Sbjct: 326 NPSNLHVVYLRNAQAGKLAQALRGLLTGESDSGASDTTRAMLSGMGSTGNKNDVQGNSSA 385 Query: 298 --------------------------NARKPSSSGAMDNVAITADEQTNSLVITADQSVQ 331 + +++ + V I AD TN+L+I+A + + Sbjct: 386 GPVSRTVAGSGYGQSSASPSVATAGSQQAEQNTAFSAAGVTIQADATTNTLLISAPEPLY 445 Query: 332 EKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQ 391 L VI +LD RRAQV++E++IVEV + + GVQW N+ + Sbjct: 446 RNLREVIDQLDQRRAQVVIESLIVEVSEDDANQFGVQWQTGNLNGSGGFGGVNLGGSGLN 505 Query: 392 GVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTL 451 + T N + + D VL AL S +++L+TP+++TL Sbjct: 506 TGGSTSIDVLPTGLN--VGVVRGAVTIPGIGEVLDLKVLARALKSKGGSNVLSTPNLLTL 563 Query: 452 DNKLASFNVGQDVPVLSGSQTTSGD----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 DN+ AS VGQ +P ++GS T G N F TV+R+ VG KL V PQ++EG V L+I Sbjct: 564 DNEAASIFVGQTIPFVTGSYVTGGGGTSNNPFQTVQREEVGLKLNVRPQISEGGTVKLDI 623 Query: 508 EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 QEVS+VD ++ G N R I ++L+ G+ +VLGGLL D + VP L IP Sbjct: 624 YQEVSNVDQRASLASGTVTNKRAIDTSILLDDGQIMVLGGLLQDGYNQSDEAVPWLSRIP 683 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALV 627 L+G LFR + +K NLMVF+RP IIRD R+++ +Y R+ Q ++ ++ Sbjct: 684 LLGVLFRNEARSTSKTNLMVFLRPYIIRDSGTGRNITLNRYEFMRRAQGNLRPERNW-ML 742 Query: 628 GSEDLPVLDENTFNSHAPAPS 648 P L P+ Sbjct: 743 PDMQAPQLPSAAKAIPDLQPA 763 >UniRef50_B3R7X2 General Secretory Pathway protein D, type II secretion system n=16 Tax=cellular organisms RepID=B3R7X2_CUPTR Length = 831 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 202/721 (28%), Positives = 322/721 (44%), Gaps = 90/721 (12%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 P A +Q NF NAD+ ++ VGQ GK +IDP V+GT+++ + S+ Sbjct: 48 TPPAPPDVTPANRDQVVLNFVNADLDSVIKAVGQATGKNFVIDPRVKGTVNLVTEQPVSR 107 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 + Q S+L + GY+++ NGF KVV A+ K P GD++VT++ L Sbjct: 108 AQALQTLGSVLRMQGYAMVES-NGFTKVVPEADAKLQGSPTVIGGSPSRGDQVVTQVFRL 166 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 A +L P+LR M+ + + Y +N L++T A + ++ +I VD + + Sbjct: 167 NYESANNLVPVLRPMIAPNNT--ITAYPANNTLVITDYADNLRRIARIIAAVDAPASGEV 224 Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQ-------MPALLSAKIVADKRTNSLIISG-P 244 +++ L++A A D A +L +L+ + + + A L +VA+ R+NSL+I Sbjct: 225 ELVPLKHALASDTAGVLQRLLDPAAAGAAGGGGAAAVDASLRTSVVAEPRSNSLMIRATS 284 Query: 245 EKARQRITSL------------------LKSLDVEESEEGNTRVYYLKYAKATNLVEVLT 286 Q+ L LK+ D + + + AT+ Sbjct: 285 RARLQQARQLIEKLDQPYARPGNIWVVPLKNADAVKLAATLRAIVAADSSFATSTQPGAQ 344 Query: 287 GVSEKLKDEKGNARKPSSSGAMDNVA---------------------------------- 312 N P+ Sbjct: 345 AGGIGGAAGMTNVSTPTGGQFTGGATTTQTGMRSGSGTGGGTGGAYGNSAFAASFGTTTQ 404 Query: 313 ------ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 I AD TNSL+ITA + V L VI LD RRAQV +E++IVEV LG Sbjct: 405 PTTGGIIQADPSTNSLIITASEPVYRNLRGVIDDLDARRAQVYIESMIVEVTATQASELG 464 Query: 367 VQWAN--KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA------YNGM 418 +QW + G Q + + G + +N + + +A G+ Sbjct: 465 IQWQGLISSSSGNNNVFAGTNFGTGGQNILNLTLAGALADSNRSAGIVAAQQLVPDIGGL 524 Query: 419 AAGFFNG--DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 G N G LL AL +N ++L+TP+++TL+N+ A +GQ++P+ +GS +G Sbjct: 525 NLGIVNRAMGLGALLRALGTNGSVNLLSTPNLITLENEEAKILIGQNIPITTGSYAQTGG 584 Query: 477 ----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS-SSNSTLGPTFNTRTI 531 F T +RK VG L+V PQ+ +G V ++I QE S+V ++N GPT N R+I Sbjct: 585 AASVTPFQTFDRKDVGITLRVKPQITDGGLVKMQIFQESSNVVQATANLIQGPTTNVRSI 644 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 + VLV G+ +VLGGL++D + V KVPLLGDIP +G LFRY + R+K NL+VF+RP Sbjct: 645 ETNVLVDDGQIIVLGGLIEDNYGDGVQKVPLLGDIPWIGGLFRYENKNRSKTNLLVFLRP 704 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQR------IDGKSKALVGSEDLPVLDENTFNSHAP 645 ++R L+ ++Y R +QQ + + L+ D P ++ P Sbjct: 705 YVMRTAGATDRLTADRYDYMRAQQQGFVSPNIMVRDTNTPLLPPADAPTTPFVNPRTNGP 764 Query: 646 A 646 Sbjct: 765 V 765 >UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 Tax=Acinetobacter RepID=B2I1Y0_ACIBC Length = 758 Score = 447 bits (1150), Expect = e-124, Method: Composition-based stats. Identities = 214/684 (31%), Positives = 335/684 (48%), Gaps = 63/684 (9%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY 75 + + A + + N +AD+ F+ V GK +DP V+G ++V SN ++ E Sbjct: 20 IATVSSSAYAQTWKINLRDADLTAFINEVADITGKNFAVDPRVRGNVTVISNKPLNKDEV 79 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 Y FL +L++ G I N +K+V +NVK S +R GD++VTR++ LEN Sbjct: 80 YDLFLGVLNVNGVVAIPSGN-TIKLVPDSNVKNSGIPYDSRNRVR-GDQIVTRVIWLENT 137 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII 195 DL P LR +M ++ +N LI++ RA+ I +L +I+ +D G + I Sbjct: 138 NPNDLIPALRPLMPQ--FAHMAAIAGTNALIVSDRAANIYQLENIIRNLDGTGQNDIEAI 195 Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLL 255 L+ + AE++ L + + K A +I+AD RTN ++I G + R+RI ++ Sbjct: 196 TLQSSQAEEIITQLEAMSATGASKDFSGA--RIRIIADNRTNRILIKGDPQTRKRIRHMI 253 Query: 256 KSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGVSEKLK--------------------- 293 + LDV ++ G +V+ LKYA A NL E+L G+ Sbjct: 254 EMLDVPSADRLGGLKVFRLKYASAKNLSEILQGLVTGQAVSSSNNSNNSSNSSNPINSLI 313 Query: 294 DEKGNARKPSSSGAM---------------------------DNVAITADEQTNSLVITA 326 N+ +S + V+I AD NSLV+ A Sbjct: 314 GNNQNSGSNTSGSNGASISTPAINLNGNSNSSNQNNITSFNQNGVSIIADNAQNSLVVKA 373 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ----QFTNT 382 D + ++ + I +LD+RR QVL+EA I+EV + LG+QWA ++ + F+N Sbjct: 374 DPQLMREIESAIQQLDVRRQQVLIEAAIIEVSGDDADQLGIQWALGDLSSGIGLLSFSNV 433 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD--WGVLLTALASNNKN 440 G + + A G G ++ + + F N +G L+ AL +N K+ Sbjct: 434 GASLSSIAAGYLSGGSAGAASAIANGANKGNGATLGLGNFDNSRKAYGALIQALKTNTKS 493 Query: 441 DILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--NVFNTVERKTVGTKLKVTPQVN 498 ++L+TPSIVT+DN+ A VGQ+VP ++GS TT+ N + TVERK VG LKV P + Sbjct: 494 NLLSTPSIVTMDNEEAYIVVGQNVPFVTGSVTTNSTGINPYTTVERKDVGVTLKVVPHIG 553 Query: 499 EGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVS 558 EG V LE+EQEVS+V S + R I+ AVL + G+TVVLGGL+ D + Sbjct: 554 EGGTVRLEVEQEVSAVQDSRGQAADLVTSKRAIKTAVLAEHGQTVVLGGLVSDDTSLSRQ 613 Query: 559 KVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQR 618 +P L IP VG+LFR + KRNL+VFI PTI+ D + R LS+++Y + Q Sbjct: 614 GIPGLSSIPYVGRLFRSDNRSNVKRNLLVFIHPTIVGDANDVRRLSQQRYNQLYSLQLAM 673 Query: 619 IDGKSKALVGSEDLPVLDENTFNS 642 + A + + + ++ Sbjct: 674 DKNGNFAKLPEQVDDIYNQKMTPP 697 >UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBE1_9GAMM Length = 630 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 204/648 (31%), Positives = 335/648 (51%), Gaps = 34/648 (5%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 K + A LL E+ N +ADIR ++ V + GK I++ V+G Sbjct: 8 KARLIQCLLIAATLLSLSQLAYSAEKLTMNMRDADIRALIQWVADNTGKNIVVHRDVKGK 67 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 ++V S + + E YQ FLS+L ++ Y+VI LK+V + + A SS Sbjct: 68 VTVLSPEPLTVDEAYQVFLSVLQVHEYAVIETPEA-LKIVPRSIAASGALPYAASSTTA- 125 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 ++V I+ +EN A +A LR +M +V + Y +N L+L AS I+ E+I Sbjct: 126 --DMVVSIIKIENTSALQMAEALRPLMSKDAV--IKPYLATNALVLADHASNISSAQELI 181 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 +++D + +I L++A AE + + L+ L+ SQ + L+ I ++R+NS+++ Sbjct: 182 QQLDKTSDSEIDVIVLQHADAESILQSLSTLL---PSGSQQASALNITISINERSNSILL 238 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 +G R++ +L+K LD +GNT V YL Y A+ +V +L +++ ++ + + Sbjct: 239 AGDPAKRKQFRNLIKKLDKPLDGQGNTDVVYLHYVDASEIVPILENLAKSIQSNQKDTD- 297 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 N++I A + N+LVI A S+ + ++I++LDIRRAQV+VEAI+VEV+ Sbjct: 298 -------SNISIEASKSANALVINAPPSILTTMKSIISQLDIRRAQVMVEAILVEVRGEL 350 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 ++GV W A S A + Sbjct: 351 ASDVGVTW----------ITDPDNSIVGAVNTLGNLPLANAPSDGSALPFSAGRGFTFGY 400 Query: 422 FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS---GDNV 478 F GD L AL++ +IL+TP+IV +DN+ AS VGQ+VP ++G T+S ++ Sbjct: 401 FNGGDLQAALRALSATQNANILSTPTIVAIDNEEASLLVGQNVPFITGQATSSASSTNDP 460 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 F T+ER+ +GT L VTP++N+GD++ LEI Q+ ++ S + N R I L++ Sbjct: 461 FTTIERQDIGTSLVVTPRINQGDSITLEIHQKTETIAPSIDIASDIVTNKREIITKALIR 520 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 + +V+GGL++D E + KVPLLGDIP +G LF T K NLMVFI PTI++DD+ Sbjct: 521 DDQVLVIGGLINDEETEIIEKVPLLGDIPYLGSLFSSKGTSHTKTNLMVFIHPTILKDDE 580 Query: 599 VYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPA 646 L++ +Y + QQQ D + K + +D VL + F++ P+ Sbjct: 581 QIARLTQTRYQFMQNLQQQVKDNEWK--IDPDDSAVLKD--FSTFTPS 624 >UniRef50_D0KWK8 General secretion pathway protein D n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWK8_HALNC Length = 725 Score = 444 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 222/652 (34%), Positives = 342/652 (52%), Gaps = 31/652 (4%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 +++ ++ NF + DI +E V + GK ++DP V+ ++V S S Q+ Y FLS Sbjct: 51 NSDTDKVTLNFRDMDIGALIEAVSKVTGKNFIVDPRVKARVTVISAKPMSPQKLYDVFLS 110 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 IL + G++ + +K+V N ++ + S VGD++VT +V L VPA L Sbjct: 111 ILQVNGFAAVPAG-AVIKIVPEINARSDAQPVNPGSS-AVGDQMVTEVVHLRYVPAAPLL 168 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 +LRQ+M + +V SN L++T RA I++L +++ +VD +II L+ AS Sbjct: 169 TVLRQIMPQQAALSVYPD--SNSLVITDRAGNIDRLKKILAKVDQPAVGDVEIIRLKRAS 226 Query: 202 AEDLAEILNQLISESHGKSQM-----------PALLSAKIVADKRTNSLIISGPEKARQR 250 A+ + L L S G AD RTNS+++SG +R + Sbjct: 227 ADSVVSTLKALFGASGGGGAKGAPVPGGGAGGNFSSVPAFAADDRTNSVLLSGDAVSRAK 286 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK---PSSSGA 307 + +++ +LD+ ++ GNTRV+ LKYA A +LV+VL G+ A +++ Sbjct: 287 MRAIILNLDMPQTNYGNTRVFRLKYANAEDLVDVLKGIVSTNGATSTGATATKEATTNPD 346 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 + + I AD+ N+LV+TA S + + +VI +LDIRR QVLVEAII EV +G LG Sbjct: 347 NNQLEIAADKSLNALVVTASPSRMQTVESVIDQLDIRRKQVLVEAIIAEVSNGVTKKLGT 406 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSA-------YNGMAA 420 Q+ + + + G + + + Sbjct: 407 QFLVGGGSGTVPIGISTFNGLLSSVASSAAQAGTGSVGSAIGLGLAGALGDGGNIGVGRY 466 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG----- 475 G D+ +L++ALA N+ N+IL+TPS++TLDN+ AS VGQ++P+++GS +G Sbjct: 467 GQGGADFALLVSALAGNSGNNILSTPSLLTLDNQEASIVVGQNIPIVTGSYAQTGSATSP 526 Query: 476 DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAV 535 N F T+ R+ +G KLKVTP ++ V L+IEQEVSS+DS++ S+ G N R + V Sbjct: 527 TNPFQTITREDIGVKLKVTPTISPDGTVRLKIEQEVSSLDSAAQSSAGLITNKRNVTTTV 586 Query: 536 LVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 V G+ VVLGGL+DD + VP LGDIP++G LFRY S KRNLM+FIRP I+ Sbjct: 587 QVDDGDVVVLGGLIDDSTNSNQQSVPGLGDIPILGNLFRYRSASTNKRNLMIFIRPLIVG 646 Query: 596 DDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAP 647 D S+E+Y R RQ QQ D +S + S+ + E F + P P Sbjct: 647 DGGKLSEFSREQYNRIRQSQQDTFDKRSL-VNPSDWSVLSPEQNFQRNLPIP 697 >UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE34_DESAA Length = 716 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 190/653 (29%), Positives = 329/653 (50%), Gaps = 36/653 (5%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + +F +A+I +FV+ + + GK ++D V+G I++ S + E YQ FLS+L Sbjct: 64 DEGLIQIDFEDAEIAEFVKYISEVTGKNFVLDSKVRGKITIMSPKKVTPDEAYQVFLSVL 123 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 ++YGY+ + + + V +P R D++VT+++ ++ D+ L Sbjct: 124 EVYGYATVKVGSLTKVVPAPDAKTKNPETRLFDHRISETDKVVTQLISMDFAQVEDVVKL 183 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG-TEKQQIIHLEYASA 202 + M+ GS+ +V Y P+N LI+T S I +L++++K +DV G E+ ++ L +A A Sbjct: 184 FQPMVSKGSL--LVAYSPTNTLIVTDVESNIQRLVKILKAIDVHGVGEELTVVPLTHAGA 241 Query: 203 EDLAEILNQLISESHGKSQMPALLS--------------AKIVADKRTNSLIISGPEKAR 248 ++A++ L S P + + KIVAD+RTNSLII + Sbjct: 242 AEMAKLATTLFESKGNTSSRPRVNTKSKNAQTVAATGDVVKIVADERTNSLIILASKDDT 301 Query: 249 QRITSLLKSLDVEES-EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 + I S ++ LD E+ EG +V YL+ A A +V+VL + K D K A P S Sbjct: 302 EAILSFVELLDKEQPTGEGKIQVVYLQNATAEEVVKVLQALPGKQTDTKNKAEAPVVS-- 359 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 +V I+AD+ TNS++I AD+ + L VI +LDI R+ V +EA+I+EV LGV Sbjct: 360 -KDVQISADKATNSIIIVADKEDFKVLKDVIEKLDIPRSMVYIEALIMEVSTDKAFELGV 418 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD- 426 +W + + + + ++ T+A A + + G + Sbjct: 419 EW-RLGDNFEVNGDQAVGWAGSGGAGSEGAYTLFPTTAEIASGVAGFPTAFSMGVIGENI 477 Query: 427 ---------WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN 477 G ++ A +++ IL+ P I+ +N+ + VG++VP ++ T+S Sbjct: 478 KIGDIYFPTLGAVMRAYKNDSDVHILSAPHILATNNEESEIYVGKNVPYVTRQDTSSSSV 537 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLV 537 + + E + VG LK+TPQ+++ V L++ QEV+ + ++ +T PT R V+V Sbjct: 538 DYTSYEYRDVGVTLKITPQISQERLVRLDVFQEVTRLIETAGTTTQPTTYKRKADTTVIV 597 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 K G T+V+GGL+D+ ++ KVP LGDIP +G FR + +R K NL VF+ P II+ Sbjct: 598 KDGNTIVIGGLIDESTEGGTYKVPCLGDIPWLGWAFRSKTEKREKTNLYVFLTPRIIQTP 657 Query: 598 DVYRSLSKEKYTRYRQEQQQRIDG---KSKALVGSED-LPVLDENTFNSHAPA 646 + +S++K ++ ++ I+ K + ++ ED LP E PA Sbjct: 658 TEAKEISEKKIESIKEVEKNVIELYKRKPEQVINVEDYLPNSPEKVDEFQEPA 710 >UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pseudomonas RepID=GSPD_PSEAE Length = 658 Score = 441 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 218/631 (34%), Positives = 344/631 (54%), Gaps = 25/631 (3%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY 75 AG+ + + N +ADIR+F++ + + G+T ++DP V+G +SV S S E Sbjct: 41 AFVPAGNQQEAHWTINLKDADIREFIDQISEITGETFVVDPRVKGQVSVVSKAQLSLSEV 100 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 YQ FLS++ +G++V+ + ++V +A KT G D L TR++ ++ Sbjct: 101 YQLFLSVMSTHGFTVVAQGDQA-RIVPNAEAKTEAG-----GGQSAPDRLETRVIQVQQS 154 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII 195 P +L PL+R ++ G++ +N LI++ R++ I ++ +VI+++D G+ +I Sbjct: 155 PVSELIPLIRPLVPQ--YGHLAAVPSANALIISDRSANIARIEDVIRQLDQKGSHDYSVI 212 Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLL 255 +L Y D AE+LN +S K A+++AD RTN LII GP +AR ++ L Sbjct: 213 NLRYGWVMDAAEVLNNAMSRGQAKGAAG----AQVIADARTNRLIILGPPQARAKLVQLA 268 Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITA 315 +SLD + NTRV L++ A L E L +SE +K+ G + + G N+ I A Sbjct: 269 QSLDTPTARSANTRVIRLRHNDAKTLAETLGQISEGMKNNGGQGGEQTGGGRPSNILIRA 328 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 DE TN+LV+ AD L ++ +LD+ RAQVLVEA IVE+ +GVQWA Sbjct: 329 DESTNALVLLADPDTVNALEDIVRQLDVPRAQVLVEAAIVEISGDIQDAVGVQWAINK-- 386 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 G+ + S S +G G + +G L+TAL+ Sbjct: 387 ------GGMGGTKTNFANTGLSIGTLLQSLESNKAPESIPDGAIVGIGSSSFGALVTALS 440 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT---SGDNVFNTVERKTVGTKLK 492 +N K+++L+TPS++TLDN+ A VGQ+VP +GS TT N F TVERK +G LK Sbjct: 441 ANTKSNLLSTPSLLTLDNQKAEILVGQNVPFQTGSYTTNSEGSSNPFTTVERKDIGVSLK 500 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSSN--STLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 VTP +N+G A+ LEIEQE+S++ ++ + + R+I++ +L + G+ +V+GGL+ Sbjct: 501 VTPHINDGAALRLEIEQEISALLPNAQQRNNTDLITSKRSIKSTILAENGQVIVIGGLIQ 560 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 D + SKVPLLGDIPL+G+LFR T KRNLMVF+RPT++RD +LS +KY+ Sbjct: 561 DDVSQAESKVPLLGDIPLLGRLFRSTKDTHTKRNLMVFLRPTVVRDSAGLAALSGKKYSD 620 Query: 611 YRQEQQQRIDGKSKALVGSEDLPVLDENTFN 641 R R +++ + + D + Sbjct: 621 IRVIDGTRGPEGRPSILPTNANQLFDGQAVD 651 >UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLP8_9BURK Length = 807 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 205/701 (29%), Positives = 324/701 (46%), Gaps = 76/701 (10%) Query: 21 GHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL 80 +++ +++ NF NADI V +G +T ++DP V+GTIS+ S + S + L Sbjct: 54 QNSQEDKFALNFVNADIDAVVRAIGSFTNQTFVVDPRVRGTISLVSPEPLSAADAKNALL 113 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP-GVGDELVTRIVPLENVPARD 139 + L L G++++ +V+ + K + G+ +VT++ L A Sbjct: 114 AALRLQGFTIVESGG-IARVLPENDAKVQADSVDPRKAMNQSGNAIVTQVFQLNYESATA 172 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY 199 L P+LR ++ + + Y +N L++T A + ++ +I +D + +++ LE+ Sbjct: 173 LVPVLRPLIAPNN--TIAAYPNNNTLVITDYADNLQRIARIIASIDGPYSGDLEVVPLEH 230 Query: 200 ASAEDLAEILNQLISES--HGKSQMPALLSAKIVADKRTNSLIISGPEKA-RQRITSLLK 256 A A DLA IL +++ E + + A ++AD RTNSL++ P KA +L+ Sbjct: 231 ALAVDLAAILGRMLDEGNRGTGAAVDAGQRLSVMADPRTNSLLLRTPSKARLNLAKALIA 290 Query: 257 SLDVEESEEGNTRVYYLKYAKA----TNLVEVLTGV------------------------ 288 LD + GN V YLK A+A L VL+ Sbjct: 291 KLDQPTKQPGNVWVVYLKNAEAAKLAKTLQAVLSSSPISDNNSSSGLSSLSGGGVGGLGD 350 Query: 289 --------------------------SEKLKDEKGNARKPSSSGAMDNVAITADEQTNSL 322 + + + + AD TNSL Sbjct: 351 TSNTNNSTRNITNGSAGLGSSSLGSSLGGGTSSGQLSAASGNVDLNNGGIVQADPSTNSL 410 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV----GAQQ 378 +ITA + + L ++I +LD+RRAQV VE++IVEV G+Q+ + G + Sbjct: 411 IITAPEPIYRNLRSIIEKLDVRRAQVFVESLIVEVSTDKAAEFGIQFQGLSGVGADGVRV 470 Query: 379 FTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNN 438 T + + N G + + + G L AL S Sbjct: 471 IGGTNFNDPGSGSNILGAATNLGSVGRGLNIGVIDGQVNIPGIGTISNLGFLARALESKA 530 Query: 439 KNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN-----VFNTVERKTVGTKLKV 493 +IL+TP+I+TLDN+ A +GQ+VP ++G T SG N F T+ER+ VG L+V Sbjct: 531 NANILSTPNILTLDNEEAKIVIGQNVPFITGQFTNSGGNGATVNPFQTIERQDVGLTLRV 590 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 PQV+EG V L I QEVSSV S+N + N R+I++ VLV+TG +VLGGL++D Sbjct: 591 KPQVSEGGIVKLGIFQEVSSVVDSTNVSGI-ITNKRSIESNVLVETGNIIVLGGLVEDRV 649 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 KVP LGD+P++GQ FRY + R K NLMVF+RP ++R++D +S+ +Y RQ Sbjct: 650 TGNEEKVPGLGDVPVLGQFFRYDNRRRQKTNLMVFLRPVVVRNEDQAQSIVTNRYDYMRQ 709 Query: 614 EQQQRIDGKSKALVGSEDLPVL-----DENTFNSHAPAPSS 649 QQ+ K L E + D N+ APA S+ Sbjct: 710 LQQENQPEKRFGLPNMEAPVLPSRRPADVARPNTVAPAQSN 750 >UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1Q9C2_PSYCK Length = 750 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 188/675 (27%), Positives = 316/675 (46%), Gaps = 60/675 (8%) Query: 9 CCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSND 68 CL L G E + N +ADI+ F+ V + ++DP + G ++V SN Sbjct: 26 LCLAIPLWAASTGLVSAESWKVNLQDADIKAFINEVATITNQNFVLDPRINGNVTVISNK 85 Query: 69 TFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTR 128 S+ E YQ FLS++ + G + I +K+V K + + D VG+ L TR Sbjct: 86 PLSRDEIYQLFLSVMQVNGIAAIDSG-TTIKLVPDNVAKQTGVAV-DLRGESVGETLATR 143 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 ++ L N A ++ ++R +M + + N L+L+ RA ++N+L +I+ +D Sbjct: 144 VIYLTNTQAAEVLGVIRPLMPPSA--HAAAVPGVNALVLSDRADSLNQLTALIRDLDSNV 201 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 + Q+I L + AE + E+++ L++ S G Q K++AD ++ L++ G + Sbjct: 202 NDSLQVIPLRHVDAERMMELISALVA-SAGSGQATGNNQLKVIADTASDRLLVKGSPEMI 260 Query: 249 QRITSLLKSLDV-EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 ++ ++ LD RV+ LKYA A ++ E+L G+ S + Sbjct: 261 AKVQEMVNQLDTTPSRRLSGLRVFRLKYASAGHIAEMLRGLLASQSINSSGGSSTLESAS 320 Query: 308 MDNV---------------------------------------------AITADEQTNSL 322 +++ +I ADE N++ Sbjct: 321 LNDAAATGSSLTGGANSKVGSNSIGGTAATPLPNNSSAGTSIGIGGRPFSIIADETQNAV 380 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNT 382 ++ A + ++ + +LD RR+QVL++A IVEV + LGVQWA N + Sbjct: 381 IVNAAPELMFEIEDAVNQLDSRRSQVLIQAAIVEVSGDDATQLGVQWALGNANSGYGVVN 440 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD-----WGVLLTALASN 437 + +A +A +GG + A + A G+ + + +G +L AL S+ Sbjct: 441 FNNVGASAVSLAAAALSGGTGISAAAGSIAGALLGIGSSSKDSKGNAQFYGAILQALDSS 500 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT---SGDNVFNTVERKTVGTKLKVT 494 ++L+ PSI+TLDN+ AS VGQ+VP ++GS TT S N F T++R+ +G L V Sbjct: 501 TSANLLSMPSILTLDNEKASILVGQNVPFVTGSYTTGSDSSTNPFQTIDRQDIGINLNVI 560 Query: 495 PQVNEGDAVLLEIEQEVSSVDSSSNST-LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 P + V LE+ QEVSSV S G N I +L +T+ LGGL+ D S Sbjct: 561 PHIGANGTVRLEVSQEVSSVVPGSAGNASGLITNKSLINTTILADDQQTIALGGLMRDNS 620 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 + KVP LG++PL+G+LFR + K NL++F++PTI+RD S+++ KY + R Sbjct: 621 TTRQQKVPGLGNVPLIGRLFRSDNDNSQKSNLIIFLQPTILRDGGAVASVTERKYNQMRV 680 Query: 614 EQQQRIDGKSKALVG 628 Q + + Sbjct: 681 LQLVIDKNGTIKQLP 695 >UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burkholderiales RepID=B1Y329_LEPCP Length = 753 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 189/667 (28%), Positives = 311/667 (46%), Gaps = 47/667 (7%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 E NF NA++ + + + I++DP V+GT+++ S +Q+E Sbjct: 43 PAASQGSRKGKETVTINFVNAEVEAVSRAMATIVNRQIIVDPRVKGTMTLYSEQPLTQRE 102 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 + +L+ L G++V+ + LKVV A K G ++ S GD++VT++ +++ Sbjct: 103 AFLNYLAALRGLGFAVVDVAG-LLKVVPEAEAKLQTGTVSVGSVLRKGDQIVTQVFKVQH 161 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 +L +LR ++ + + +N L++T A + +L ++I +DV + ++ Sbjct: 162 ENVNNLVTVLRPLITPNN--TINANPGNNSLVITDYADNLQRLAKIIGALDVPSSTGVEV 219 Query: 195 IHLEYASAEDLAEILNQLISESHGK--SQMPALLSAKIVADKRTNSLIISGPEKA-RQRI 251 I L++ A DLA ++ + S +P+ + +VAD RTNSL++ P A + Sbjct: 220 IALQHGVASDLAPLVQRFADTSGVTAAGAVPSAGAVSVVADPRTNSLLVRAPNAARLAAV 279 Query: 252 TSLLKSLDVEESE---EGNTRVYYLKYAKATNLVEVLT---------------------- 286 +++ LD + GN V YLK A AT L +VL Sbjct: 280 MAVIDKLDRPSANGGPGGNIYVVYLKNADATKLAQVLRAAYGGAGGGSSGGSAATGSLAS 339 Query: 287 ---------GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATV 337 G + + + +S+ I AD TNSL+I+A + V +L V Sbjct: 340 AGQANTAAGGTATGMSSVQATTPVAASASPSTGGFIQADPATNSLIISAPEPVYRQLRGV 399 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 I +LD RRAQV VE++IV++ G QW + G Sbjct: 400 IDQLDARRAQVYVESMIVKMDATQAAEFGFQWQGLLGQSGDRYGLVAGTNFGTGGNNIVN 459 Query: 398 KNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 + G + + A G L L SN ++L+TP+++ LDN+ A Sbjct: 460 LSVGAATGAALPGAGLNVGLLKAINGVYTLGALARFLESNTGANVLSTPNLIALDNEEAK 519 Query: 458 FNVGQDVPVLSGSQTTSGD-----NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 +GQ+VP ++GS T +G N F T+ERK VG L+V PQ+ EG V + I QE S Sbjct: 520 IVIGQNVPFVTGSFTNTGTSNGSANPFQTIERKDVGLTLRVKPQIGEGGTVRMVIYQENS 579 Query: 513 S-VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 S V +++ ++ GPT + I+ V+V G +VLGGLL D +VP L IPL+G Sbjct: 580 SVVANTTTNSAGPTTDKSAIETTVVVDDGSIMVLGGLLKDDYGSGEDRVPGLASIPLIGG 639 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED 631 LFR + +R K NL+VF+RP ++R +L+ ++Y R +Q K ++G + Sbjct: 640 LFRSENRKRTKSNLLVFLRPVVMRSQQDANALTLDRYDAIRAQQMNEQP-KPSTVLGINE 698 Query: 632 LPVLDEN 638 PVL E Sbjct: 699 SPVLPER 705 >UniRef50_Q2Y7S4 Type II and III secretion system protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y7S4_NITMU Length = 789 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 207/688 (30%), Positives = 316/688 (45%), Gaps = 81/688 (11%) Query: 21 GHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL 80 A + NF NADI V+ V + K ++DP V+GTI++ S + Y+ FL Sbjct: 63 SSAGQDLVTLNFVNADIEGVVKAVSEITRKNFMLDPRVKGTINIVSAKPVPRSSVYEVFL 122 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVK--TSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 S L L+GY+V+ D G +++V ++ K P + + R GD + T++ L+ A Sbjct: 123 SALRLHGYAVVE-DYGIIRIVPESDAKLYQGPTLGPTNKRQLAGDRIQTQVFTLQYESAV 181 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 + P+LR ++ + ++ SN L++T AS + +L ++I VD + I L+ Sbjct: 182 QMVPILRPLIAPNN--SITANPNSNTLVITDYASNLQRLAKIIDSVDQPSGTEPVSIPLQ 239 Query: 199 YASAEDLAEILNQLISESHGKSQM----PALLSAKIVADKRTNSLII-SGPEKARQRITS 253 +ASA D+A+ +N+L SES P +VAD R+N+L+ SG A R+ Sbjct: 240 HASAIDVAQTVNRLFSESTQSQAEGAADPTQQRFTVVADARSNTLLARSGNRAALARLRQ 299 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT----------------------GVSEK 291 L+ LD S GN V +LK A A L E L Sbjct: 300 LVTVLDSPTSAAGNMHVVFLKNADAVRLAETLRAIYHNMASPVSSSSGLSQGTGTAFGTS 359 Query: 292 LKDEKGNARKPSSSGAMDNVA-------------------------------------IT 314 +SSG + I Sbjct: 360 SLGTSTGGGMGASSGTSTGGSMGTSMPGSSLGAGTVPAASTVTPAPMQTGATSATPGIIQ 419 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 AD TNS++ITA ++ L V+ +LD+RR QV +EA+I E+ G+QW N + Sbjct: 420 ADAATNSIIITAPDAIYNNLRAVVEKLDVRRVQVYIEALIAEITADRAAEFGIQWQNLSN 479 Query: 375 GAQQFTN--TGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG-----DW 427 AQ T G G AN A + G + Sbjct: 480 AAQGGTQVFGGTNFNAGTAGGGSIISTAQNPIANAASGLTIGIMNGLVTAIPGIGPVLNI 539 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS----QTTSGDNVFNTVE 483 L+ AL ++ +IL+TP+++TL+N+ A +GQ+VP+ +G + + F TV Sbjct: 540 HTLIRALETDANANILSTPTLLTLNNEEARIIIGQNVPIPTGQFIPPVGGAVTSPFQTVS 599 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS-SSNSTLGPTFNTRTIQNAVLVKTGET 542 R+ VG LK+ P ++EG+ V ++I QEVSSV + N+T G N R+I++ VLV G+ Sbjct: 600 RQDVGLSLKIKPLISEGNTVRVQIFQEVSSVVPGTVNATNGLITNKRSIESTVLVDDGQI 659 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRS 602 +VLGGL+ D + V ++PL+G IPL GQLF Y R K NLMVF+RPT++R D Sbjct: 660 LVLGGLMQDSVNDSVERIPLVGAIPLFGQLFSYNKRSRNKTNLMVFLRPTLMRAGDAADP 719 Query: 603 LSKEKYTRYRQEQQQRIDGKSKALVGSE 630 LS +Y R EQ++ + L E Sbjct: 720 LSDAQYDRVLGEQKKVRPKFNLVLPDME 747 >UniRef50_B1JDL3 General secretion pathway protein D n=6 Tax=Pseudomonas RepID=B1JDL3_PSEPW Length = 650 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 191/605 (31%), Positives = 323/605 (53%), Gaps = 22/605 (3%) Query: 28 YGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYG 87 Y NF + ++ +F++ V + G T ++DP V+G ++VR+ D Y FL+ L G Sbjct: 34 YEVNFVDTELGEFIDSVSRITGTTFIVDPRVKGKVTVRTVDRHDADAIYDIFLAQLRAQG 93 Query: 88 YSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG-DELVTRIVPLENVPARDLAPLLRQ 146 Y+ + L NG +K+V + P + + + G G D + TR+ + N + + +L+ Sbjct: 94 YAAVDLPNGSVKIVPDQAARLEPVPVEAAGKHGEGSDGVATRVFNVRNAASEQMLGILKP 153 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLA 206 ++D VG + Y +N+L++T S + ++ +++++D + E +++ L +ASA D A Sbjct: 154 LIDPR-VGVITPYPAANLLVVTDWRSNLERIDSLLRQLDQVSDEPLKVMPLRHASAADTA 212 Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE-- 264 ++L +L++ G S ++VAD R+N+L++ G R+ +LL LD Sbjct: 213 QLLTRLLAREQGAD------STQVVADPRSNALLVRGS---TDRVRALLGQLDQPSENRH 263 Query: 265 EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS-------SGAMDNVAITADE 317 NT+V YL++A A +V+VL G+S++ A + + + + + + +E Sbjct: 264 SSNTQVIYLRHANAGEVVKVLRGLSQEGGVPSEGAGEGEAKDKPVMAAASDSGIRLEYEE 323 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG-A 376 TN++V+ S +++ +LDIRRAQV+VEAII EV D LGVQW + Sbjct: 324 GTNAVVMVGPDSELAAYRSIVEQLDIRRAQVVVEAIIAEVSDSRAQELGVQWLFADEKFG 383 Query: 377 QQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALAS 436 N G N A + G+ ++ +L+ AL Sbjct: 384 AGIVNFGSNGVNIANIAGAAASGDNEALGDLLSATTGVTAGIGHFGGGFNFAMLINALKG 443 Query: 437 NNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQ 496 + ++L+TP+++TLDN AS VGQ+VP ++GS T + N + T+ERK VG KL++ PQ Sbjct: 444 KSGFNLLSTPTLLTLDNAEASILVGQEVPFVTGSVTQNNANPYQTIERKEVGVKLRIKPQ 503 Query: 497 VNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQ 556 +N ++V L+I QEVSS+ SS ++ N R I+ V+V+ V+LGGL+ D Sbjct: 504 INIDNSVRLDIVQEVSSIADSSAASDV-ITNKREIKTKVMVEDNGLVILGGLISDELSTS 562 Query: 557 VSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQ 616 +VP LGDIP +G+LFR +++ K+NLMVFIRP I+RD LS++KY +Q Sbjct: 563 DQRVPFLGDIPGLGRLFRSEASKNTKQNLMVFIRPRILRDGPSLAGLSEDKYRTLQQTTP 622 Query: 617 QRIDG 621 ++ G Sbjct: 623 LKLPG 627 >UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyphomonadaceae RepID=Q0ASR3_MARMM Length = 650 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 204/661 (30%), Positives = 327/661 (49%), Gaps = 32/661 (4%) Query: 5 NKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISV 64 L ++ A A + NFN A+I+ ++ V G T ++DP+V+G +++ Sbjct: 6 KNALAALCVLSVLVLAPMARAQDQVVNFNQAEIQAVIDDVSAVTGYTFIVDPNVRGRVTI 65 Query: 65 RSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDE 124 S + +Y+Q FLS + ++GY+V+ +G ++V S + + R GD+ Sbjct: 66 TSQAPLTSDQYFQVFLSTMRVHGYTVVPTASGAYQIVPDQAGARSANPVNSNLR---GDQ 122 Query: 125 LVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 VT +V L +V +RD ++R ++ G+ G+V E NVL++ A I +L +VI+ + Sbjct: 123 YVTAVVRLNHVASRDALAVVRPLI--GAQGSVNATETGNVLVMVDYAENIARLRQVIRDL 180 Query: 185 DVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 D + +++ L SA D+ IL Q+ + S A I +N++++ G Sbjct: 181 DRDTSVV-EMVELTNVSAGDMTRILQQMRTSSTAGEDETIFNVA-IAPIPASNTVLLRGN 238 Query: 245 EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS 304 A R+ +L++ +D + RV YL +A +L+ +L V + L +G R P Sbjct: 239 RDAVDRMIALVRRVDSVSQSNRSFRVIYLSHADGEHLLPILQQVVDTLVAGEGTTRAP-- 296 Query: 305 SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN 364 +++ TN+LVI AD VQ +L VI +LDIRR QVLVE IIVE+ D Sbjct: 297 -------SVSHHAPTNALVINADPDVQRQLELVIRQLDIRRPQVLVEGIIVEMSDSTARE 349 Query: 365 LGVQWANKNVGAQQFTNTG---------LPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 LGVQ L + AA D + ++ + A + Sbjct: 350 LGVQMLLAGGEGDTPLAMTRFSSNNPDLLALTGAATSPGDDDSDLNVSLRDAAINSLLGA 409 Query: 416 NGMAAGFFNGD-----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS 470 +G GF + +G++L A+ S+ +++LATPSI+ LDN+ A F GQ++PV +G Sbjct: 410 SGGTLGFGGQNGSGNLFGLVLNAVESDVNSNVLATPSIMALDNEEAYFLSGQEIPVTTGE 469 Query: 471 QTTSGD-NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN-STLGPTFNT 528 S + N F TV+R+ VG KL V PQ+ EG+ V L I QEVSSV + N + N Sbjct: 470 ALGSNNTNPFRTVDREEVGVKLTVLPQITEGNTVRLHIVQEVSSVAGAVNAGSSDLITNK 529 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 R I VL GE +VLGGL+ + VP L +P VG+LFR + + NLMVF Sbjct: 530 REISTTVLADNGEIIVLGGLIQQEDEISEDGVPGLRRLPGVGRLFRSEGSTTRRTNLMVF 589 Query: 589 IRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAPS 648 IRPTIIR + ++L+ +Y R EQ + +L ++ +++ + + A P Sbjct: 590 IRPTIIRSEADMQALTDNRYDFIRNEQIAGSPNGTSSLESIVEMMLVEMDAPVATAETPG 649 Query: 649 S 649 Sbjct: 650 D 650 >UniRef50_B3E7M1 General secretion pathway protein D n=8 Tax=Geobacter RepID=B3E7M1_GEOLS Length = 648 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 189/656 (28%), Positives = 322/656 (49%), Gaps = 22/656 (3%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK L + LL L HA + NF + +I V+ + + GK ++D V+G Sbjct: 1 MKQLKALLIALLLMTLCSSPLHAAAQGVIMNFTDVEIATMVKFISELTGKNFVLDERVKG 60 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 +SV S SQ E + F S+L+L G+++I KVV + + K + +AD R Sbjct: 61 KVSVFSPSKLSQDEAFALFTSVLELKGFTLIQAG-KVYKVVPTGSAKQAGMKLADKERIP 119 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 +GD + R+ PL + +++ L+ ++ G++ + P N+L++ AS + K+ ++ Sbjct: 120 LGDAFLARVFPLTQISSQEALTFLQPIISKE--GHIGSFGPGNMLLVVDAASNLQKVADI 177 Query: 181 IKRVD-VIGTEKQQIIHLEYASAEDLAEILNQLISESH------GKSQMPALLSAKIVAD 233 + +D E ++++L++ SAE + ++L + ++ G +Q + +++AD Sbjct: 178 LSLIDTPQRREGAELVYLKHGSAEGVTKVLQEWLAGRGARQVAVGTTQSANSGAVQVLAD 237 Query: 234 KRTNSLIISGPEKARQRITSLLKSLDV-EESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 R N++++ GPEK ++ I SL+ LDV V +L+ AT + +VL GV + + Sbjct: 238 TRLNAVLLFGPEKDKKDIRSLIAQLDVTPPEASSKINVCFLENTDATEMAKVLDGVVKGI 297 Query: 293 KDEK-----GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 + G SS V ITAD+ +NSLV+ A + L VI +LD R Q Sbjct: 298 TAQTTTLQAGTVSAQSSPFDSGKVTITADKASNSLVVMASPTDYNNLLQVIKKLDRRSKQ 357 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP 407 V V+ +I E+ +LGVQ VGA G I++ +G TS Sbjct: 358 VFVQVLIAEISPSKSRDLGVQSGAFAVGALGKYLQGGGIYDPFNTFGSLLGSGSSTSPLS 417 Query: 408 AWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL 467 N +L AL S +IL+TP+I+T DNK A NVG++VP Sbjct: 418 TLIADKLKNTSKPVTG----AAILQALESEGMLNILSTPNILTTDNKEAEINVGENVPFK 473 Query: 468 SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFN 527 S S ++ +VERK +G LK+ PQV+EGD + +++ QE+S+V S + Sbjct: 474 SSSTQSTFGT-TESVERKDIGINLKIKPQVSEGDYIRMDLYQEISAVKSDKGDAVDLVTT 532 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 R+ + +V+VK ET+V+GGL+ D + KVPLLGDIP +G F+ T+ R K NL++ Sbjct: 533 KRSAKTSVVVKDNETIVIGGLIQDTEDNTIQKVPLLGDIPGLGWFFKTTTKTRKKTNLLI 592 Query: 588 FIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGK-SKALVGSEDLPVLDENTFNS 642 + P +++D S+++ + ++ + ++ + G PV Sbjct: 593 MLTPQVVKDARDLASITESQKGKFTEAAKEFGPLNVQNEISGKATKPVSQGQESRP 648 >UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V9I3_SPHWW Length = 682 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 174/682 (25%), Positives = 314/682 (46%), Gaps = 70/682 (10%) Query: 3 GLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTI 62 L+ + +A + G ++ N DI E + + G+T+++DP+V+GT+ Sbjct: 8 ALSALVAAAMAGTPILAQGASQAADVVVNMRAVDIADVAEQISRITGRTLILDPAVKGTV 67 Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG 122 +V S + S + F S+L ++G++ + +++ A+ G S G Sbjct: 68 NVTSAEPLSVDGVWDLFQSVLRVHGFAAVKSGRS-WRIIPQASAIRDAG----SGGRLSG 122 Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 ++ TR+V L+NV A + R ++ G++ N +I+T A + ++ + + Sbjct: 123 QDVTTRMVRLQNVSGEQAARVFRPLVAQ--FGSIEAMASPNAIIVTDYAENVRRIESLAR 180 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 +D G + I L YA+A+D+A + ++ + ++VAD+R+N +++ Sbjct: 181 ALDSGGGGRFDSITLRYANAKDVAAAIQGVMGDGTATGG------PRVVADERSNIVLVR 234 Query: 243 GPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKD-------- 294 G L ++D + TR+ L A ++ EVL GV + Sbjct: 235 GEPAMVSEARRLAHTIDKPGAGVPITRMIRLNNGDAESVTEVLQGVLGEQGTVTNPAARA 294 Query: 295 ----------EKGNARKPSSSGA---------------------------------MDNV 311 ++ NA ++ + ++ Sbjct: 295 VAGGRARITRQQSNAGAQAAGLSLGSTPATLGGGLADAASPGAGGSGGDATPKGFSTPDL 354 Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 + + N++V+ + ++ +IA+LD+RR QVL+EA IVE+ L VQ Sbjct: 355 TVQPAPELNAIVLRGTPAAIAEVEPLIAQLDVRRPQVLIEAAIVEISGDQAEQLAVQLGI 414 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLL 431 + + + + G +PA + G A F ++ +LL Sbjct: 415 GAAAINRASGGATSFTSPGLPLQSILTAIG----SPAAGAVLSNGGSANIRFGDNFSILL 470 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--NVFNTVERKTVGT 489 A+ + ++++L+TPS+ TLDN+ A VGQ+VP +GS +T G+ N F T+ER+ VG Sbjct: 471 QAIGQSTRSNLLSTPSLTTLDNEPAEIVVGQNVPFRTGSFSTDGNTINPFTTIERQDVGL 530 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLL 549 L+V P++++G+ V LE+ QEVSS+ ++ N R+IQ +VL G+T+VLGGL+ Sbjct: 531 TLRVVPRIHQGNVVRLEVAQEVSSLTNAVTGAADLITNRRSIQTSVLADDGQTIVLGGLI 590 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 D + S+VP+LGDIP+ G+LFR KR L VF++PTI+RD + S+++ KY Sbjct: 591 SDDRTQTRSQVPILGDIPIAGELFRSRKESHVKRTLFVFLKPTILRDREAANSVTQAKYA 650 Query: 610 RYRQEQQQRIDGKSKALVGSED 631 R R ++ G L Sbjct: 651 RTRYDEAMLGKGPPLLLEPPGR 672 >UniRef50_C4K9Q5 General secretion pathway protein D n=1 Tax=Thauera sp. MZ1T RepID=C4K9Q5_THASP Length = 728 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 191/688 (27%), Positives = 303/688 (44%), Gaps = 63/688 (9%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 C HA E NF NA+I ++ +G+ G+ LIDP V+G I++ +N + + YQ Sbjct: 38 SCLVHAAGEPVALNFQNAEIDAVIQAIGRISGRNFLIDPRVKGKINLVTNTPVAPELTYQ 97 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIA---DSSRPGVGDELVTRIVPLEN 134 LS L L GY+ I ++G K+V A+ K + + GD LVT++ L + Sbjct: 98 ILLSALRLQGYAAIE-ESGVTKLVPEADAKLHGVPVVSGRPGAGAARGDRLVTQVFALRH 156 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 A + ++R ++ A + V + +N L++T A + +L VI +D + Sbjct: 157 ESAVHMVNVVRPLVSANNA--VTAFPGNNTLVVTDYAENLRRLATVIDSIDTPQG-DVAV 213 Query: 195 IHLEYASAEDLAEILNQLISES-HGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 + L++A A DLA +L +L++E G L +IVA+ +NSL++ +R Sbjct: 214 LQLQHAMANDLAPVLVRLLAEQQTGGQNAGGLAPPQIVAEPNSNSLLVRADTPSRLAALR 273 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA- 312 L + G+ RV YL+ A A + L A S + Sbjct: 274 QLVTALDRPGAGGDIRVVYLRNADAVQVAATLNAALAGEGGTSDAASTQPLSRNSGGGSG 333 Query: 313 ----------------------------------------ITADEQTNSLVITADQSVQE 332 + D N+L+ITA +V Sbjct: 334 FGTDSSAPSGMGVASAPLRGTGSTSGSAAGGLSSATRGGMVQPDAVNNALIITAPDAVYR 393 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW------ANKNVGAQQFTNTGLPI 386 L VI +LD RRAQV +EA+I E+ G QW V Q N+G Sbjct: 394 NLRAVIDQLDRRRAQVYIEALIAEISTERAAEFGFQWVAGASAGEVGVLGAQLFNSGGGN 453 Query: 387 FNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATP 446 + + + + + + GVL L + +IL+TP Sbjct: 454 LGQLIAGSADRTRLTLPNNGLNLVVGGGKVNVPGIGEVLSLGVLARFLENEVSANILSTP 513 Query: 447 SIVTLDNKLASFNVGQDVPVLSGSQTTSGD-----NVFNTVERKTVGTKLKVTPQVNEGD 501 +++TLDN+ A VG+++P ++G +G N F T+ER+ VG L V PQ++EG Sbjct: 514 NLITLDNEEARIVVGRNLPFVTGQYANTGGGTTPANPFQTIERRDVGLTLHVKPQISEGG 573 Query: 502 AVLLEIEQEVSSVDSS--SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSK 559 A+ L+I QE S+V S S + R+I++ VLV G + LGGL++D K Sbjct: 574 AIRLQIYQEASAVVGSAESAAAGNSVTTKRSIESMVLVDDGAILALGGLVEDSYSGGEEK 633 Query: 560 VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRI 619 VP+LGD+P G LFRY + +RAK NL+VF+RP I+RD + Y +L+ +Y + Q Sbjct: 634 VPVLGDLPFAGSLFRYDTRKRAKTNLVVFLRPVILRDRESYAALTDSRYDYVIGRRDQLP 693 Query: 620 DGKS-KALVGSEDLPVLDENTFNSHAPA 646 G + + + + F PA Sbjct: 694 SGANLLRDPPPGEPAPVVDLAFRPLQPA 721 >UniRef50_Q7NRG7 Probable type II secretion system protein n=1 Tax=Chromobacterium violaceum RepID=Q7NRG7_CHRVO Length = 708 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 197/694 (28%), Positives = 314/694 (45%), Gaps = 68/694 (9%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 ++K+ L +N+ NF NADI V+ +G+ GK +IDP V+GT++ Sbjct: 3 ISKLVVALSLIYSCNLLAAPQNDTVMLNFVNADIETVVKAIGEISGKNFIIDPRVKGTVN 62 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 + S+ + YQ LS L L G+S + NG +K+V A+ K + G GD Sbjct: 63 IVSSRPVPRALSYQVLLSSLRLQGFSAVE-GNGVIKIVPEADAKLHAKA-SKRIPRGDGD 120 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 L+T++ L N A L P++R ++ + V Y +N LI+T A I ++ +I+ Sbjct: 121 RLITKVFALRNSNANQLVPVIRPLVSPNNT--VAAYPQANALIVTDYADNIQRIESIIES 178 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 V+ +I + + SA +LA LN+L+ E I+AD R N L++ Sbjct: 179 VESAAAGDTVVIPVLFGSAVELANSLNKLMQEGGADGG-----KTTILADARANVLLVRA 233 Query: 244 P-EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 ++ SLLK LD N RV YLK A+A+ + + L + Sbjct: 234 DTPGKIGKVKSLLKVLDQPSQAGSNVRVVYLKNAQASEVAKTLRLLLASEGSPVQTRSTI 293 Query: 303 SSSGAMDN--------------------------------------------VAITADEQ 318 +++ + I AD Sbjct: 294 NTATSTGGSASLMPSTTGSGSGASAQNPVSSPDAGAAVAASSSSAPSGAGVGTMIQADSN 353 Query: 319 TNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQ 378 +N+L++ + + L VI LD RRAQV VEA+++EV +GVQWA G Sbjct: 354 SNALILNVPDPMYQNLRNVIDLLDKRRAQVYVEALVMEVTASRATKIGVQWAANVHGNGL 413 Query: 379 FTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA--------GFFNGDWGVL 430 N+ + T+ + AA G G+L Sbjct: 414 IGNSLPSPSKPLVPGGSGASDTPGTALGSLVSSLTGGGLTAAIINTITVGGQQIPTLGLL 473 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS----QTTSGDNVFNTVERKT 486 AL + +++A+P +VT+DN+ A +GQ++ V + + + + ++T +RKT Sbjct: 474 AQALEQEAQGNLVASPQLVTMDNEKAKIVIGQEIGVPTATYPAGTNGTSNAPYSTYDRKT 533 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-NSTLGPTFNTRTIQNAVLVKTGETVVL 545 VG L++TPQ++EG + ++I Q S+D ++ ++ GPTFN RT+ V V G V L Sbjct: 534 VGFGLEITPQISEGGTIRMKISQAADSIDQTTLSAAAGPTFNRRTLDTVVTVGDGGLVAL 593 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL + + KVPLLGDIP++G LF+Y ER K NLM+FIRPTIIRD+ R+++ Sbjct: 594 GGLTQETTSNAEDKVPLLGDIPVIGNLFKYQGKERKKTNLMIFIRPTIIRDEIGNRAVAG 653 Query: 606 EKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENT 639 E+Y E R G+ L ++ L + Sbjct: 654 ERYGYV-MEDAARNVGRKLPLGLNDQLKTPAAGS 686 >UniRef50_B8GXR3 Type II secretion pathway protein D n=3 Tax=Caulobacteraceae RepID=B8GXR3_CAUCN Length = 687 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 182/658 (27%), Positives = 294/658 (44%), Gaps = 54/658 (8%) Query: 11 LLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTF 70 + A L P A+ + N +ADIR F++ V + G T +IDP V+GT++V SN Sbjct: 20 MGGASLGPAPVLAQTQL--LNVQDADIRVFIQDVAKSTGTTFIIDPRVKGTVTVASNGPL 77 Query: 71 SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIV 130 +++E ++ FL+ L + NG ++ S N P G + T + Sbjct: 78 NRRELFEVFLATLRANNFVATPAGNGAYRIEPSENAARQP--------SAAGGQFATEVF 129 Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 L + A +L+ ++ G VV V+++ A + ++ ++ +VD Sbjct: 130 RLRTLDAASAVEMLKPLVGPQ--GQVVANPRGAVVVVADYADNVRRIRGLLAQVDQDRAM 187 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 + L ++SA ++A++LN +++ G + +V +NS+++ G A QR Sbjct: 188 VHTV-TLTHSSAREIAQVLNDMLAT-PGAEGKSGRGAVTVVPVDSSNSVLLRGDSDAVQR 245 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE--------------- 295 + ++ LD + RV +L++A A ++ VL + + Sbjct: 246 LLPVIADLDRRAESSDDVRVVFLRHANAEQMLPVLQQLVGQATTSVTTSSSRGLSNARTA 305 Query: 296 ---------KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 + S I N+L+I A Q LA VI +LD+RR Sbjct: 306 TGASTATTAPSAPVAATPSANGPQATIARFPGANALIINAPPETQRTLAEVIRQLDVRRE 365 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNT--------------GLPIFNAAQG 392 QVLVEAI+VEV DG LGVQ+ G + Sbjct: 366 QVLVEAIVVEVTDGTAKQLGVQFLLGGTNGTIPFVATNYTNATPSLLPLVGAAATTTSGA 425 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLD 452 + K+ + + +G+ + +G ++ A+ + +++L+TPSI+TLD Sbjct: 426 DTEALKSLRDAAVSSLLTASGVTSGVVGRSGDALFGAIINAVKKDTGSNLLSTPSIMTLD 485 Query: 453 NKLASFNVGQDVPVLSGSQTT-SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 N+ A VGQ+VP+ +G S N F T++R+ VG +L+V PQ+N G + L + QEV Sbjct: 486 NEEARILVGQEVPITTGEVLGDSNANPFRTIQRQNVGIQLEVKPQINAGGGITLFLRQEV 545 Query: 512 SSV-DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 SSV S + N R I+ LV G+ VVLGGLLD + + P LGD+P +G Sbjct: 546 SSVAGPVSVGSSELIINKREIETTALVDDGDIVVLGGLLDQQETQSAQRTPGLGDVPGLG 605 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVG 628 LFR T+ ER K NLMVFIRP IIR R+L+ +Y R +L Sbjct: 606 ALFRSTARERKKTNLMVFIRPRIIRSSADARNLTAPRYDYMRNLPPMTTPDGDNSLDA 663 >UniRef50_Q1JVV5 Type II and III secretion system protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV5_DESAC Length = 665 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 191/652 (29%), Positives = 312/652 (47%), Gaps = 38/652 (5%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 + + L L C + +F + ++ + V + GK + D S++G + Sbjct: 13 MLLGSVLLAGPLTSACQAQTDGVGITLDFKDIELTDLIRTVSELTGKNFVYDDSIRGKAT 72 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 + S+ S E YQ FL++L++ GY+V+ K+V + K S + D Sbjct: 73 IISSQQMSVNEAYQLFLTVLNVKGYTVVPSGKTN-KIVPIKSAKESNLPTMTGNLAQ--D 129 Query: 124 ELVTRIVPLENVPARDLA-PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 + VTR++ LEN+ A D+A +L +M S NVV YEPSN+LI++ AS I +L +I+ Sbjct: 130 QFVTRMISLENINAADIAESILSPLMPKTS--NVVVYEPSNMLIISDSASNIQRLTTIIR 187 Query: 183 RVDVIGT-EKQQIIHLEYASAEDLAEILNQLISESHGK-----------SQMPALLSAKI 230 +DV G + Q+I L++A A++ A I N ++S + K + A ++K+ Sbjct: 188 ELDVPGALQDMQVIPLQFADAKETATICNDILSSGNTKATSRRRASKNVTTSSADATSKV 247 Query: 231 VADKRTNSLIISGPEKARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGVS 289 +A +RTN L++ I SL+ LD E ++E +YYL+ A A L + L + Sbjct: 248 IAYERTNRLVVMATSDDMTTILSLIAELDQEPTQEHARINLYYLENADAEELSKTLNEIL 307 Query: 290 EKLKDEKGNARKPSSS-------GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 +K ++ + NV ++AD+ TN+LVI A + +I +LD Sbjct: 308 SGIKKPATSSSAAAGGKGTIPAAAIQTNVTVSADKPTNALVINATPEDYVIIKDIIKQLD 367 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ------QFTNTGLPIFNAAQGVADY 396 IRR QV VEA+I+E+ LG Q + I + + + Sbjct: 368 IRRKQVYVEALIMELSMDATEALGSQLQGAFEVGNEGIVNLSSNSAPGGILSDPESLLTT 427 Query: 397 KKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLA 456 NG + + L+ + +IL+ P ++T DN+ A Sbjct: 428 SVNGLLAGGFSKLIGVDTDGDGVDDSQVTAFSALIKLSKDDTNVNILSAPRLLTSDNEEA 487 Query: 457 SFNVGQDVPVLSGSQTTSGDN----VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 VG++VP+++ T S + +VERK V L+ TPQ+ EG+ V L + QE + Sbjct: 488 EIVVGRNVPIITSRLTDSTGSDSLAQSVSVERKDVALTLRFTPQITEGELVRLNVYQETT 547 Query: 513 SVDSSSN--STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 + S +++GPTF TR I N VL + G+TVVLGGL+ +E +SKVPLLGDIPL+G Sbjct: 548 DLTDSVGDVNSVGPTFTTRKISNTVLARDGQTVVLGGLISTNQQETISKVPLLGDIPLLG 607 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGK 622 LF+ + K NL+VFI PTII D + +++ + + + Sbjct: 608 WLFKSKDNKEVKTNLLVFITPTIISDMEDLSNVTTINRETFDRIKNDPEASN 659 >UniRef50_Q1YQU4 Putative general secretion pathway protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQU4_9GAMM Length = 629 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 190/613 (30%), Positives = 307/613 (50%), Gaps = 24/613 (3%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 K + ++ L L M A E NF +ADIR +E V + GK+ ++DP V+G Sbjct: 10 KRIIRLLGALSIVLSMIAEISA-GEVVRINFRDADIRSVIESVAEITGKSFVLDPRVKGK 68 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 +++ + + Y+ LS + + G+ I D ++V G D Sbjct: 69 VTIIAPEAIDSDLLYEAVLSAIQVQGFQAIE-DGAVTRIVPFTQAFNFAGGAGD------ 121 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 + L+T+++ +E+V L P+L+ +M +G+ N + SN +++T S I +L +I Sbjct: 122 -NRLITKVIQIEHVQVATLVPVLKPVMSSGARLN--AFTQSNSMVVTDVQSNILRLESLI 178 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 +D ++I L+ SA + I G+ + +V D N +II Sbjct: 179 ADLDDPTLNAVEVIRLKNISAGEAVYI--------AGQLKQLKNQDLSLVEDGMNNRVII 230 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 SG AR+ ++LK+LD +++G+ V YL Y++A + ++ G+ + + Sbjct: 231 SGTASARRAFKAMLKTLDQPSTKKGSVEVIYLDYSRAAEMKPIVEGMLQSDVFLQLAGEA 290 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 + A I DE N+LV+ A +V ++ V+A+LD R QVL+EA+I E+ + Sbjct: 291 VADKKAKAAYQIQIDELNNALVVAAPTAVIREIKNVVAQLDRSRPQVLIEAVIAELSEDQ 350 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 L Q A + + + G+ A G Sbjct: 351 AQELSSQLAYSSKNRGGYLTNFDGLLATLTGLGISGVEPTAAELGLLPKKVMAVAGDFDS 410 Query: 422 FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG---DNV 478 G+L+ AL ++ IL+TPS+VTLDN+ A+ +VG++VP +GS T+S +N Sbjct: 411 ETGKGIGLLIQALKTDGSTKILSTPSVVTLDNEEATLSVGEEVPFQTGSFTSSNNGSNNP 470 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 F T+ R+ VG KLKV PQ+++GD+V LEIEQE S V S T + T+Q VL++ Sbjct: 471 FTTINREEVGVKLKVKPQISKGDSVRLEIEQESSKVKSGVPGLQ--TTSKSTMQTNVLIQ 528 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 GE ++LGGL++D + +KVPLLGDIPL+G+LFR TS ++ LM+FIRPTIIR + Sbjct: 529 DGELLILGGLIEDQTGGSATKVPLLGDIPLLGRLFRSTSKADSQSVLMMFIRPTIIRTAE 588 Query: 599 VYRSLSKEKYTRY 611 R LS KY+ Sbjct: 589 DARKLSGSKYSHL 601 >UniRef50_C6XJ47 General secretion pathway protein D n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJ47_HIRBI Length = 660 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 192/656 (29%), Positives = 315/656 (48%), Gaps = 47/656 (7%) Query: 2 KGLNKITCCLLAALLMP------------CAGHAENEQYG-ANFNNADIRQFVEIVGQHL 48 K L+ +L + P + A+ N + DI ++ V Sbjct: 7 KVLHGAALAMLGGFIAPMGQQAIADELGETSVRADGTSVHVMNLKDVDISVLIDDVSAIT 66 Query: 49 GKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKT 108 G T ++ PSV+G +SV S + +E +Q FLS L ++G++ I G K+V + Sbjct: 67 GHTFVVHPSVRGRVSVSSQTPLTNREVFQVFLSTLRVHGFTAIPSRGGVYKIVPEQSASA 126 Query: 109 SPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILT 168 G+ S GD+ T ++ L N A + A +++ + + G + SN LI+ Sbjct: 127 EAGLARPSVG---GDQFETAVIRLRNFDATEAAKMIKPITNPQ--GQLTASGESNTLIVV 181 Query: 169 GRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSA 228 A+ I+++ +V+ ++D +E I L SA ++A +N + S G + Sbjct: 182 DYAANISRVRKVVAQIDEDQSETL-TIALTNMSATEMANTVNSMKSTGRGSAGF----KV 236 Query: 229 KIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTG 287 A + NSLI+ G K + ++++LDV E+ + +V LK+++A ++ +L Sbjct: 237 TATAVESNNSLIVKGDIKDVAEVHEIVRNLDVANREDDASLKVLSLKHSEAKDIAPILEM 296 Query: 288 VSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 + ++L ++ SS I E TNSLV++A V +L V+ LD RR+Q Sbjct: 297 MGQRLAEQARPGANASSV-----PKIAIYEPTNSLVVSASPMVLRQLERVVEELDQRRSQ 351 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP 407 VLVEAIIVE+ D LG+++ G+ + V + S Sbjct: 352 VLVEAIIVELSDNAARELGLEFVLSGSGSSATPFAATNFTRSTTNVLSLAGALALDSDTV 411 Query: 408 AWDMFSAYNGMAAGF----------------FNGDWGVLLTALASNNKNDILATPSIVTL 451 + S+ A +G ++ A+ S+ +++L+TP ++T+ Sbjct: 412 GEETVSSLRSAAISSLLGSAGGLLGIGGQSSDGTIFGAIINAVDSDITSNVLSTPHLLTM 471 Query: 452 DNKLASFNVGQDVPVLSGSQTTSGD-NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE 510 DN+ AS VGQ+VP+ +G + + N F TVERK +G L+V PQ+ EGD++ L + QE Sbjct: 472 DNEKASITVGQEVPITTGEALGTNNSNPFRTVERKPLGVTLEVEPQIGEGDSIKLNLRQE 531 Query: 511 VSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 VSS+ S + T N R I +L GE VVLGGL+ + +SKVPLLGDIP VG Sbjct: 532 VSSIFDSIDGTDF-ITNNREINTTILADDGEIVVLGGLIQEEETLNISKVPLLGDIPGVG 590 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 +LF T + + NLMVF++PTI+RD + + + +KY RQEQ + L Sbjct: 591 RLFSSEGTTKKRTNLMVFLKPTIVRDAETMQRATDQKYRYIRQEQMSASRSERAGL 646 >UniRef50_Q6MMM9 General secretion pathway protein D n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MMM9_BDEBA Length = 765 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 160/663 (24%), Positives = 304/663 (45%), Gaps = 50/663 (7%) Query: 29 GANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGY 88 +F N +I + + + GK +IDP V+G I++ + + E Y+ FLS L + G+ Sbjct: 104 SFDFPNVEISDIIRAISELTGKNFIIDPGVRGKITIIAPTKITVSEAYKAFLSALAINGF 163 Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 +V+ FLKV + N + + D+++TRI+ L+++ A + LR + Sbjct: 164 TVVPSG-SFLKVKSARNAQRDNIETFSGAYYPNADQMITRIIHLKHISASQVNRDLRILP 222 Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG-TEKQQIIHLEYASAEDLAE 207 N+ YEP+N +I++ S I++++++I ++DV G E+ ++I ++YA ++DLA+ Sbjct: 223 SKDGEMNI--YEPTNSIIISDYGSNIDRVMKIISQLDVPGFEEQLEVIPVKYAKSKDLAD 280 Query: 208 ILNQL---------------------ISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 +++++ S S G + + D RTNS+I+ G + Sbjct: 281 LVDKIVNKGNKTQGSAPGTFTAGVPRFSRSAGATSQQGASFFMAIPDDRTNSIIVVGNKS 340 Query: 247 ARQRITSLLKSLD--VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS 304 RI L+ LD + E G VY +++ A + + L GV++ + S Sbjct: 341 GIVRIKKLISQLDFKIRAEESGGVYVYNVRHGDAEKIAQTLQGVTKDAAPKPATGGSLLS 400 Query: 305 SGAMDN-----------VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 V ITAD+ TNSL++TA + + + +++++D R QV VEAI Sbjct: 401 PLGSQGMQAPQEIFGGDVKITADKTTNSLIVTASKQDYDVVLNILSKIDTPRDQVFVEAI 460 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 I+E+ +G + G+ + + N ++ +G + + Sbjct: 461 IMEMSVNDGNSWGIGYYQYGDSGYGKVGFN-GLSNINDFLSPTGGSGAVIGFGQGKTVEV 519 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS-GSQT 472 + L + K +IL+TP ++TLDN+ VG V V Sbjct: 520 TDPVSKTTLKIPSLLGFINFLKTAKKANILSTPQLMTLDNQEGELEVGDKVVVGENVQNV 579 Query: 473 TSGDNVFNTVERKTVGTKLKVTPQVNE-GDAVLLEIEQEVSSVDSSSN-----STLGPTF 526 + T + + KL + P ++ + + +EI+Q+V+ + ++S + P Sbjct: 580 GTSGTTVRTPQFEDATIKLAIKPFISPASNQIRMEIKQQVAQLSTASTPKAFQDSTQP-L 638 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 R+++ + V G+TVVLGGL+ + +E V+KVPLLGDIP++G LF+ + + K N++ Sbjct: 639 AKRSLKTVINVNNGDTVVLGGLMKEQDQESVTKVPLLGDIPIIGWLFKSRTIVKDKTNMV 698 Query: 587 VFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPA 646 VF+ P I+R++ ++ +K + + E + + S A Sbjct: 699 VFLTPKIVRNNIEANAIVSKKLDERVDFVKAQGGVDPYGAKLDE---IRRKAEAPSAADV 755 Query: 647 PSS 649 P++ Sbjct: 756 PAT 758 >UniRef50_C5CPK3 General secretion pathway protein D n=1 Tax=Variovorax paradoxus S110 RepID=C5CPK3_VARPS Length = 774 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 195/694 (28%), Positives = 318/694 (45%), Gaps = 69/694 (9%) Query: 9 CCLLAALLMPCAGHA--ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 L AA + +G A E NF NADI + G+ +++DP V+GT+++ + Sbjct: 26 TLLQAAPVFAQSGDAPRRGEPITLNFANADIEAVARTMAVVTGRDVVVDPRVKGTMNLVT 85 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG---VGD 123 + + + F S L L G++V+ + KVV A+ K + ++ G+ Sbjct: 86 DRAIAPAAAFNQFASALRLQGFAVVEAEG-LYKVVPEADAKLQTQTVNTATPSAGSVAGN 144 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 ++VT+I L L P+LR ++ + NV +N L++T A + +L +I Sbjct: 145 QIVTQIFRLNYESPNSLLPVLRPLIPPNNTINV--NPGNNSLVITDYADNMRRLARIIAA 202 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESH--------GKSQMPALLSAKIVADKR 235 +DV ++I L+++ A D+ ++ +L+ S A ++AD R Sbjct: 203 LDVPNASDIEVIPLKHSIATDMLPLITRLVDGSGSGATPGAPAPGVADASFRTTLLADPR 262 Query: 236 TNSLIISGPEKARQR-ITSLLKSLDVEESEE-----GNTRVYYLKYAKATNL-------- 281 +N+LI+ AR + +L++ LD +E GN V YLK A A L Sbjct: 263 SNALILRAANPARAALVRTLVEKLDRAPAESSNGAAGNIYVVYLKNADAVRLAATLRAAM 322 Query: 282 -------------------------------VEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 ++ + + NA +++ Sbjct: 323 AANQLPGTPGAPGAAGGGGAPQQQQANIPQAMQQTSLSGQGGGSAAANAPLNNANQPSTG 382 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 I AD TNSL+ITA + ++ VI +LD RRAQV++EA+IVEV N GVQW Sbjct: 383 GQIQADPSTNSLIITAPEPQYRQMRAVIDKLDGRRAQVMIEALIVEVSAKKAANFGVQWQ 442 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + + + + P+ + G G + G + Sbjct: 443 SALGNNAVIGTNSSLASANILALTQALATRDVANVRPSSGLNLGIAGKIGGQYI--LGAI 500 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD----NVFNTVERKT 486 S+ ++L+TP+++TLDN+ A +GQ+VP ++G ++ N F TVERK Sbjct: 501 ANFFNSDGDANVLSTPNLLTLDNEEAKIVIGQNVPFVTGQYASTSGSVGINPFTTVERKD 560 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDS-SSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 VG L+V P +NE V + I QE S+VD + N+ GPT N R+I+++VLV+ G V+L Sbjct: 561 VGLTLRVRPTINENGTVKMTIFQETSTVDGNTINNPNGPTTNKRSIESSVLVEDGGLVML 620 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGLL D + KVP+ GDIP++G LF+ R K NLM+F+RP ++RD + + Sbjct: 621 GGLLSDDYGNTIEKVPVAGDIPVLGNLFKNEIRTRNKSNLMMFLRPAVMRDGASTEAFAY 680 Query: 606 EKYTRYRQEQQQRIDG-KSKALVGSEDLPVLDEN 638 ++Y R QQ+ + L G + PVL E Sbjct: 681 DRYDEIRGMQQRTQPNTDNIMLRGVDAAPVLPEA 714 >UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6E1_9BACT Length = 668 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 147/608 (24%), Positives = 290/608 (47%), Gaps = 37/608 (6%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 L A E NF++A+I+ V+ I+G+ L ++D V G +++ ++ + Sbjct: 83 PALYKPAYTGEKIDIALNFDDAEIKDVVQVILGEILNVNYVLDKRVGGKVNLHASGEVYK 142 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 +E S+L +Y ++++ N + + ++ + + +I P +++ +IVPL Sbjct: 143 EELISMLNSLLYVYNFTILKDGNLYNVLPQAEARRETSIIIHGDKIPEWSKDIIIQIVPL 202 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTE 190 + + L+ ++Q M S+GN+V +E L++ AS + KL+ +IK DV + Sbjct: 203 KYADPKKLSSTVKQFMS--SIGNIVTHEDFPYLMIIDNASVMEKLLTIIKIFDVPFLAGK 260 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 + +Y A ++++ L L K +D ++I+ + + Sbjct: 261 AMRFYEFKYVDARNMSKDLGSLAKSLGAKVGGDGEFDFVPFSD-TNKLIVITKLPELLPK 319 Query: 251 ITSLLKSLDVEES---EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 I +K++DV + EE +Y +++ KA +V ++T + ++ K Sbjct: 320 IDMWIKNIDVPPTQLDEEMRVYIYKVQHQKAETIVPIITQMYS---EKMAAQPKKLGRDI 376 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 ++++ + AD +TNS+++ S + + +I +D QV +E +IVEV + L+ G Sbjct: 377 VESMKVLADTETNSVIMKTFPSDYKSIKAIIEAIDATPQQVFIEVLIVEVTRNDTLDYGT 436 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW 427 +W Q + + A +A F G + Sbjct: 437 EWLWSGSNLQVYG-----------------------VGDIARAAGNAAVQFTNTFAKGSF 473 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN-VFNTVERKT 486 +L+ LA+++ IL+ P I+ D + AS VG++VP+L+ S +G F V+ + Sbjct: 474 EILIDILATSSNAKILSAPHILVRDEQPASIQVGEEVPILTSSGQQTGTTITFEQVQYRD 533 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETVVL 545 G L VTP + E + LE+ QEVS+ + PTF+TR +Q ++++K+G T+ L Sbjct: 534 TGIILTVTPHIAENGLITLEVNQEVSNAKLTDTGVEKSPTFSTRQVQTSLVIKSGHTIGL 593 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GG+++ ++++V K+PLLGDIP +G LF+ TS + L++ I P I + + SL++ Sbjct: 594 GGIIEQKNEKEVKKIPLLGDIPYLGNLFKATSLIDKRTELIMLITPYIANNAEDADSLTQ 653 Query: 606 EKYTRYRQ 613 + ++ Sbjct: 654 AFEKKLQE 661 >UniRef50_C1SHL2 General secretion pathway protein D n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHL2_9BACT Length = 616 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 161/618 (26%), Positives = 294/618 (47%), Gaps = 27/618 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDP-SVQ 59 M + + L A + + NF + ++++FV V + G+ + D ++ Sbjct: 1 MSFIRVMFLLYLLAF----SSFVYAAEINVNFRDMEMQEFVSFVSEFTGRNFVYDKKDLK 56 Query: 60 GTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 G +S+ S+ + + F S L G ++ ++++VR +++ IADS Sbjct: 57 GQVSIESSSEMGTDDIMEIFASTLRANGLELVDRG-TYVEIVRQSDIS----DIADSDGV 111 Query: 120 GVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 G G+ L+T I+ N A LA L ++ G V + N +++ R I KL + Sbjct: 112 GDGNALITTILTSHNYDASLLAGTLIKLKSKA--GYVDVLKGLNAIVIRDRIDRITKLKK 169 Query: 180 VIKRVDVIG-TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS 238 +++++++ I+ +E+ASA ++ L +L S+ K M IVAD +N Sbjct: 170 LMEKLEMKAAGYTIHIVKVEHASASEMESTLKKLYSDLQKK--MMVANDPVIVADDYSNL 227 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNT-RVYYLKYAKATNLVEVLTGVSEKLKDEKG 297 L+++ E+ ++I+ ++ +D + N +V+YL A A ++ +VL+ ++ ++KG Sbjct: 228 LVVACAERDFEKISYVISQIDSPIPSDHNAPKVFYLNNANAEDVEKVLSKLTGVENEDKG 287 Query: 298 NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEV 357 S+S + D TNS+++ + K+ +I +LD R QV VEA+I+E Sbjct: 288 KKASNSTS------TVAFDAATNSIIVFGSPDLYSKVEGLIEKLDRPREQVYVEALIIET 341 Query: 358 QDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG 417 NG + GV+W Q G + A G + A Sbjct: 342 SIENGSDFGVEWQVGAGNDSQAGTIGYLGSDGALTSFQSSVLDGDSPNFGALSSGFNLGI 401 Query: 418 MAA-----GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT 472 + G G+L + + + +IL+ P I+TLDN+ A VG++ P L+ ++ Sbjct: 402 LGDIVTYEGVSFPTLGILANFVKTASGINILSNPQILTLDNEEAEIFVGENRPFLTSTKY 461 Query: 473 TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQ 532 S +N + + + VG KL + PQ++ D + L+IEQEV V ++ + P TR+ + Sbjct: 462 DSNNNPVQSYDYRDVGVKLNIVPQISSNDTITLKIEQEVKKVSGATADVVAPVTLTRSTK 521 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 V +K G +V+ GLL D S+ S VP L IP++G LF+ ++ K N+MVFI + Sbjct: 522 TKVKLKDGAIMVISGLLKDDSETYNSSVPWLSSIPVIGWLFKNKNSSSEKTNMMVFISTS 581 Query: 593 IIRDDDVYRSLSKEKYTR 610 IIR + + L+++K Sbjct: 582 IIRTQEDAKKLTEKKQNE 599 >UniRef50_D0XKD9 General secretion pathway protein D n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XKD9_9CAUL Length = 688 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 179/678 (26%), Positives = 305/678 (44%), Gaps = 66/678 (9%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 ++ + N ADI+ E V + G+T+++DP VQG ++V S Sbjct: 25 VSMAATTGGQTGAPPPVAMQDVVINMRGADIKDVAEQVSRITGRTLVLDPQVQGQVNVVS 84 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 + S+ ++ FLS+L G++ + N ++V A V S +++ +++ Sbjct: 85 AEPLSRNGVWELFLSVLRTSGFAAVRSGN-VWRIVPQATVVQSGA--SETGAAVSNQQII 141 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 TR++ L N+P+ LR ++ S G + N +++T A I ++ ++ +D Sbjct: 142 TRLIRLRNLPSDQAVRALRPLVS--SFGAIEPITEPNGVVVTDYAENIRRVQQLASTLDS 199 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 G + I L YA+A ++A + L+ G ++ AD+R+N L+I G Sbjct: 200 GGGSSFESIALRYANAGEVATSVGALLGSDAGG--------PRVTADERSNVLLIRGDAA 251 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK---------- 296 + S++ +LD TRV L+ + A ++ E++ G+ Sbjct: 252 DLAQARSIVAALDTPGGATPVTRVVRLRNSDAESITEIVRGLLGGEPSATNPVARSLRQD 311 Query: 297 ----------------------------------GNARKPSSSGAMDNVAITADEQTNSL 322 R P++S ++ V + A + N++ Sbjct: 312 TGLASLSANNRDVAAQAASAISSSGEGAATSLPSSAPRSPAASFTLEGVTVQASPELNAV 371 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNT 382 V+ + E L +I++LD+RRAQV +E IVE+ G +GVQ Sbjct: 372 VMRGPPATVEMLQDLISQLDLRRAQVKIEVAIVEITGELGEQIGVQLGLGGAVPDDGVIG 431 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDI 442 G N + G + S G G++G+LL AL +N+ ++ Sbjct: 432 GTSFSNGGSDLGTVLSALGYPAGRLLGQGLSLAAG-----SEGEFGLLLQALGTNSAANL 486 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGS--QTTSGDNVFNTVERKTVGTKLKVTPQVNEG 500 L++PS+ LDN+ A VGQ+VP +GS + N F T+ R+ VG L+V P+V+EG Sbjct: 487 LSSPSVTVLDNQPAEIVVGQNVPFRTGSFATDGNSTNPFTTISREDVGLTLRVIPRVHEG 546 Query: 501 DAVLLEIEQEVSS-VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSK 559 D V L++ QEVSS V ++ N R+IQ +VL GET+VLGGL+ D S+ Sbjct: 547 DVVKLDVSQEVSSLVTTNITGAADLITNRRSIQTSVLANDGETIVLGGLVTDDRMSNNSR 606 Query: 560 VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRI 619 VP L +P+VG FR + +R L +F++PTI+R DD + ++E + R R + RI Sbjct: 607 VPGLSSLPVVGNAFRSRRDSQTRRTLFIFLKPTILRTDDDVAASARESFDRLRANEPVRI 666 Query: 620 DGKSKALVGSEDLPVLDE 637 D + D + E Sbjct: 667 DPTRPPPIAR-DPRLPPE 683 >UniRef50_C5S7Y5 General secretion pathway protein D n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7Y5_CHRVI Length = 733 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 155/650 (23%), Positives = 290/650 (44%), Gaps = 68/650 (10%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 + P A NF+ DIR+ V+ I+G L ++ P+VQG S+++ +++ Sbjct: 99 IAPSEVDASPGDVTLNFDGTDIREVVKVILGDLLKVNYVLHPAVQGATSLQTGRPLRRED 158 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 ++L + +++ + + V + V+ + + + ++VPL Sbjct: 159 LLPTLETLLRMNNAALVQKGDRYEVVPLANAVQGRVTPQLGETDRALPNGYSVQVVPLRY 218 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 + A ++ +L + GSV + N+L++ G + ++ L++ I+ DV + Sbjct: 219 IGAEEMNSILTPLAPEGSV--IRVDNLRNLLVIAGTSPEMSNLLDTIRVFDVDWMSGLSV 276 Query: 195 --IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP-EKARQRI 251 LEYA ++D+ L L+++ G P + + + N+L++ P E+ Q++ Sbjct: 277 GFFVLEYAKSKDVVTQLESLLADESGN---PLKGIFRFIPVESANALLVVSPQERYLQQV 333 Query: 252 TSLLKSLDVEES---EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM 308 + ++ LD+ E+ VY +K++ A +L ++L+ + + + + + Sbjct: 334 RNWIERLDMAEARSDSSERLYVYRVKHSDAESLADILSQLFGGTGSNARKSSVGNVAPGL 393 Query: 309 DN----------------------------------------VAITADEQTNSLVITADQ 328 V I AD NSL++ A Sbjct: 394 GRSSSIGGTTTTTTSGNSDSKTSQSQTTRQSASSHELEMSSSVNIVADAVNNSLLVRASP 453 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFN 388 +K+ + +LDI QVLVEA IVE+ L GVQW GA + F Sbjct: 454 RDYKKILDALKQLDILPLQVLVEATIVEITLSGSLKYGVQWELFGPGADGKS------FA 507 Query: 389 AAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSI 448 + G D + GI + P ++ N L+ALA +N ++L++PS+ Sbjct: 508 SLDGTFDDAETSGIGTMFPGFNWAMVSN-------PDTIKATLSALAGDNLLNVLSSPSV 560 Query: 449 VTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT--VERKTVGTKLKVTPQVNEGDAVLLE 506 + +DN+ A VG++VP+ + Q + + K G L V P+V G V LE Sbjct: 561 MVMDNQTAKIQVGREVPIATSKQDGTSTTDRTYTTISYKDTGVILTVKPRVTPGGLVQLE 620 Query: 507 IEQEVSSV-DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGD 565 IEQEVS+V + +++ P+F RTI ++V V++ + VVLGGL++D + +P L Sbjct: 621 IEQEVSTVFEENASGLNSPSFKKRTITSSVAVRSNQAVVLGGLIEDTRSDGKQGIPGLYS 680 Query: 566 IPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ 615 +P+VG LF TS + L+V + P +I +D S++++ + R + Sbjct: 681 LPVVGGLFGETSKSSTRTELVVVLTPKVIANDQDIESVTEDFRQKVRGLK 730 >UniRef50_A3W186 General secretion pathway protein D n=1 Tax=Roseovarius sp. 217 RepID=A3W186_9RHOB Length = 648 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 172/650 (26%), Positives = 301/650 (46%), Gaps = 35/650 (5%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 M ++ ++ L P A+ + +A +R FV+IV Q G+ ++D VQG Sbjct: 1 MHFHKRLALLVMLWLAWPGLLAAQ---VSLDLRDASLRDFVQIVAQSTGRNFILDERVQG 57 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 +++V + + S Y+ FL++L+L +++ ++V + +R Sbjct: 58 SVTVVAPNQVSPSAIYEIFLNVLELNRLTIVEGAETD-RIVPIDLARELAP---GDARAR 113 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 +G + TR+ P+ N ++A ++R ++ A +V + S ++IL+ R +++++ Sbjct: 114 LGGDFETRVFPVRNSSVDEIAEVIRPLLPAEAV--LSTVPESGLMILSDRRENFQRIVQL 171 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 + R+D + I L A ++ ++ L + + AD R+N+LI Sbjct: 172 VDRLDTPSRNSIETIPLRNGKAAEMLSVITAL---------AITPQGSSLSADPRSNALI 222 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 +SG + R R+ ++ LD + T V +L YA AT+L +V+ + A Sbjct: 223 VSGTPEFRDRVRDVVSELDRPQ-RSIATEVVHLNYANATDLADVIRQSFGAPEASTEGAA 281 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 + G + I A+EQ N+L+ITA + + LD R QVL+EA+I E+ Sbjct: 282 PTAVPG---GITIVAEEQQNALIITAPTDRIASITGAVRGLDQRPDQVLIEAVIFELSVE 338 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 + +L Q+ GA + A + T G A Sbjct: 339 SFSDLSFQFGGVIDGAT------VGGVEFALQGRPTLTSLVSTVLAGNAPTGGGTGGSIA 392 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN--- 477 F G L ALAS + +L+TPSI+TL+N+ A V Q+VP ++GS +T GD+ Sbjct: 393 AFDKSGIGGFLAALASKSSTKLLSTPSILTLNNREAEIVVAQNVPFVTGSFSTVGDSAVP 452 Query: 478 --VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAV 535 F T++R+ VG L VTPQ+ V LEI QEVS++ +++++ G + R + V Sbjct: 453 NQPFQTIQRQDVGLTLTVTPQITRDKTVRLEINQEVSNLTNAASAAGGEITSKRELSTNV 512 Query: 536 LVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 LV+ G ++LGGLL++ S +VP L ++PL+G+LF+ S +R L+V +RP I+ Sbjct: 513 LVRDGHVIMLGGLLENGSGSVNQRVPGLSELPLLGRLFKGRSVNENQRILLVMLRPRILS 572 Query: 596 DDDVYRSLSKEKYTRYRQEQ--QQRIDGKSKALVGSEDLPVLDENTFNSH 643 D+ R L+K ++ D + V P N Sbjct: 573 SDEEARELTKRLAREAKRAADYIAPADDGTYPRVPDSSFPFDGANLNQPF 622 >UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C127_HYPNA Length = 653 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 175/639 (27%), Positives = 299/639 (46%), Gaps = 31/639 (4%) Query: 2 KGLNKITCCLLAALLMPCAGHA-ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQ- 59 + L L A+ A +++ N + ++ +E + G T + P V+ Sbjct: 4 RILFAAVAALSASQFATAQAPAPSQDKHVLNLEDVELNTLIEDISMLTGYTFITHPDVRR 63 Query: 60 GTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 +SV S + E +Q FL+ L + G++ + ++V A T M Sbjct: 64 AKVSVISQTPMTTTELFQVFLTTLRIQGFAAVPAGKDTYRIVPRAIASTEAPMSGPG--- 120 Query: 120 GVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 + VT ++ L+ A + A +++ ++DA G VV +N L++ AS + ++ Sbjct: 121 --PNAFVTEVIKLDRANAMEAAQMIKPLLDAQ--GQVVANAGTNTLVVVDYASNLERVRR 176 Query: 180 VIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 +I+ +D + + L A ++ +L +L + + VA +NS+ Sbjct: 177 IIETLD-RDQTVTETVPLTNVPAVEIETVLTRLQGDPSAQQGQAP-SRLSAVASLTSNSI 234 Query: 240 IISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA 299 I+ G + +R + LD + + RV L YA A +V +L V+ + ++ + Sbjct: 235 ILRGDATSVERAKRVALELDATNPQRDHVRVITLNYADAEEVVPILERVANSMAMQRAPS 294 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 + I TNSL+I+A+ + V+ LD+RR QV+VEAIIVE+ D Sbjct: 295 ETAPVAQ-----TIAHHGPTNSLIISANPETILAMERVVTALDVRRPQVMVEAIIVEMSD 349 Query: 360 GNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW---------D 410 LG+Q+ G + A +A +PA Sbjct: 350 DAARELGLQFLLAGTGGDVPFASTNFSRAAPNLLALTGALVTDAFEDPAAENPFREAAIS 409 Query: 411 MFSAYNGMAAGFFNGD----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 + +G+ GF +GV+L A+ + + IL+TP +TL+N ++ VGQ++PV Sbjct: 410 SLTGSSGLTLGFGGTSGDNLFGVILNAVEDDTASRILSTPFGMTLNNATSALIVGQEIPV 469 Query: 467 LSGSQTT-SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT 525 +G + N F TVERK +G +L+VTP++ E D V L+I QEVSSV S + Sbjct: 470 TTGQVLGEANSNPFRTVERKDIGIQLEVTPRIGENDTVRLDIRQEVSSVFGSVGTVTPDL 529 Query: 526 F-NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 + R I+ +VL GE +VLGGL++ + +KVP+LGDIP VG+LFR +RN Sbjct: 530 ILDKREIRASVLADDGEIIVLGGLVEQTDTLRDTKVPVLGDIPGVGRLFRSEGKAATRRN 589 Query: 585 LMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKS 623 LMVFIRPTI+R+ ++++++KY + E+ R + Sbjct: 590 LMVFIRPTIVRNKADAQAVTQQKYLYVQAEELMREQSPA 628 >UniRef50_A0YBF4 Type II and III secretion system protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBF4_9GAMM Length = 617 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 199/632 (31%), Positives = 345/632 (54%), Gaps = 39/632 (6%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 + + E N +ADI ++ + + K I++DP V+ +++ +N + + + Sbjct: 19 IQTPTPSTEELLTINMRDADIGSVIQWIAEQTNKKIVVDPRVRAKVTILANKGMTANQAF 78 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 + FL++LD+YGY+V L++ + K+SP + ++ G E + + ENV Sbjct: 79 EVFLAMLDVYGYAVTETGG-ILRIFPAVQAKSSPKQLVENFSALGGGEQILYVFKAENVS 137 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 A L +L+ ++ S G + Y SN LI+ A + +L+ +++++D G+ ++I+ Sbjct: 138 ANRLLEVLKPLLP--SSGYIAAYPQSNSLIIADEAENVKRLVALVRKIDASGSIDIEVIN 195 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 L +A AE+++ ++ L+S++ G++ I D R+NSL++SG +R+ L+K Sbjct: 196 LLHADAENVSGLVLSLLSDTTGET-------FSIAPDIRSNSLLMSGDAATTRRVRQLVK 248 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITAD 316 LD S+ GNTRV YL Y +A ++ +L G+ +++ NA S +++I A Sbjct: 249 QLDQPISDNGNTRVVYLHYLEAKEVLPILKGMGAAMQENNRNAGDSS------DISIEAS 302 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA 376 E +N+LV+TA S+ + ++ VI ++DIRRA +LVEAIIVEV +GV+W Sbjct: 303 ESSNALVMTAPPSMLDVMSRVIEQIDIRRASILVEAIIVEVSKDFSQTIGVEW------- 355 Query: 377 QQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF-NGDWGVLLTALA 435 +A A+ N G+ + + + + G+ GF+ NG VL A+A Sbjct: 356 --------NTSLSANDGAEALTNFGLRNIDESGAVSLLGAGLNLGFYRNGSLRVLAQAIA 407 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVL---SGSQTTSGDNVFNTVERKTVGTKLK 492 + N +IL++P I+T+DN+ A VG +VP + S ++S + F T+ER +G LK Sbjct: 408 NENDANILSSPRIMTMDNEEAEILVGSNVPFITGQSTGSSSSTGDPFTTIERHDIGLTLK 467 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDF 552 +TPQ+NEGD++ L+I QEV ++ ++ N R+I+ V+V+ +VLGGL+ D Sbjct: 468 ITPQINEGDSITLDILQEVETISEATTVANDIVTNKRSIKTKVIVEDDAILVLGGLVSDD 527 Query: 553 SKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 ++E VSKVP LGD+PL+G LFR T+ K+NLMVFI P I+ D + ++S++ Y + Sbjct: 528 TQELVSKVPFLGDLPLLGGLFRTTTDTVVKKNLMVFIHPVIVDSDQISDNVSRKNYDLMK 587 Query: 613 QEQQQRIDGKSKALVGSEDLPVLDENTFNSHA 644 Q++ GK +D + D N F Sbjct: 588 SLQEKYNTGK----FSVDDTALPDFNQFKPQE 615 >UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P6R4_AZOSE Length = 769 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 158/694 (22%), Positives = 276/694 (39%), Gaps = 91/694 (13%) Query: 23 AENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 ++ F A + F I+G L + + G +++ + + S Sbjct: 100 SKGGAVSLKFEQAPVTDFAHAILGDLLKLDYTLHQPLGGEVTIHTQGAVPPDKVLSILES 159 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 +L G ++ G V R ++ + G +V +VPL+ V A ++A Sbjct: 160 VLAANGLTLARDAQGLYHVGRPELLRGLGASAVNVKAIPTGQGMV--VVPLQFVGAAEMA 217 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEY 199 +LR + A + V N+LIL+G + + ++ + DV + + LEY Sbjct: 218 DILRPVAPAEAF--VRVDTLRNLLILSGSGNQLEGWLDFVNIFDVDMLKGMSVGLFPLEY 275 Query: 200 ASAEDLAEILNQLISESHG--------------------KSQMPALLSAKIVADKRTNSL 239 AS +++ L + + P +I+ +R N+L Sbjct: 276 ASVKEVDAALRAVTGAPAAAASAARGEGQQQAPAEIKQLPTFGPLGGVVRILPIERLNAL 335 Query: 240 IISGPEK-ARQRITSLLKSLDVEE--SEEGNTRVYYLKYAKATNLVEVLTGVSEKLK--- 293 ++ P Q+ ++ LD E VY ++ A +L +L+ V + Sbjct: 336 LVVTPRAHYLQQAKEWIEKLDRPSDGGTEPQLYVYPVQNGSAQHLGSLLSAVFGGGQAGA 395 Query: 294 ------------------------------------DEKGNARKPSSSGAMDNVAITADE 317 ++ + + V + ADE Sbjct: 396 ARTPTDSGVAPGLSSIGRTGLGGSGMMSQALNNAGRNDGSQTQATTQFSLGPLVRVVADE 455 Query: 318 QTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ 377 N+L+I A S K+ + RLD+ QVL+EA I+EV + G+QW + Sbjct: 456 FNNALLIYAPGSEYRKIEAALRRLDLSPTQVLIEASILEVTLSDETRFGLQWFFEGKLGG 515 Query: 378 QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASN 437 + +GL A++ + + N A G +L A+A Sbjct: 516 DYRGSGLFTDRASETLGRTVPGFSYSITNAA----------------GQVRAVLNAMAQK 559 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQV 497 + +++++PS++ LDN A +VG P+ S T G +++ K G L+VTP Sbjct: 560 SLVNVISSPSVMVLDNHTAVIHVGDQQPIRSTQTVTDGGTTSTSIQYKDTGVMLQVTPSA 619 Query: 498 NEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQV 557 N G V ++I+Q V+ V + ++T +FN R + + V V+TGETV+LGGL+ D Sbjct: 620 NAGGMVAMDIKQSVTDVGAVDDATGQRSFNQREVASKVAVRTGETVILGGLIRDSDTNGK 679 Query: 558 SKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQ-- 615 + VP L DIP++G LF TS + L+V I P +++ D R L E R Sbjct: 680 TGVPWLHDIPVLGPLFGTTSDVTRRTELLVMITPRVVQSDQQVRELGIEMRRRMEGLSVL 739 Query: 616 QQRIDGKSKALVGSEDLPVLDENTFNSHAPAPSS 649 ++ VG + LP +E + APAP+S Sbjct: 740 PGWERFEADPGVGKDMLPAPEE----TPAPAPAS 769 >UniRef50_Q1D9E0 General secretion pathway protein D n=2 Tax=Cystobacterineae RepID=Q1D9E0_MYXXD Length = 863 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 187/711 (26%), Positives = 317/711 (44%), Gaps = 92/711 (12%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSND----TFSQQ 73 C N +YG F+ +I + V+ V +T ++ +V+G IS+ + + Sbjct: 58 TCEEARRNARYGIYFDKVEIEKLVQTVADATCRTFILPENVRGKISIIGPENGRVEVNAD 117 Query: 74 EYYQFFLSILDLYGYSVITLDNGFLKV-VRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 +Y FL+ LD G + V RSA P ++ + +++VT++ + Sbjct: 118 AFYSAFLAALDANGLAAYQYGRFMKIVDKRSAKQNPIPTIVEEGEPYTTNEQMVTKLFRV 177 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG-TEK 191 +NV L +L+Q++ G+ + Y P + +I+ S I++L +I ++D +++ Sbjct: 178 QNVEVEPLRGVLQQLVSKD--GDTIPYPP-DTIIINDVGSNIHRLERIIHQLDTRAASDE 234 Query: 192 QQIIHLEYASAEDLAEILNQLISESHGKSQMPALLS------------------------ 227 +II ++YASA+D+A + +L + PA Sbjct: 235 MRIIQVQYASAQDVANTVQRLFEAKGARPGQPAAAGRNVPPAAAQATPQAGQGQEGATGG 294 Query: 228 ----AKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVE 283 ++I+ D+RTN LII A +RI ++ +D+ S G VYYL+ A A L Sbjct: 295 PVTLSQIIPDERTNKLIIVASPAAFERIQDIVGQIDIPTSGGGRINVYYLENANAEELAS 354 Query: 284 VLTGVSEKLKDEK---------------GNARKPSSSGAMDNVAITADEQTNSLVITADQ 328 L +++ + G ++ V I+AD+ +NSLVI A Sbjct: 355 TLQSLAQGTGNAPRGRTPVPARPPGAPGGPTTTQAAELFSGEVKISADKGSNSLVIVASS 414 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFN 388 + + + VI +LD R QV VEA+I+EV LG+ + + + + Sbjct: 415 ADYKNIVQVIQQLDKPRRQVFVEAVIMEVNLDRNARLGMNLHSGFSLSTSNGDQVPGLIG 474 Query: 389 AAQGVADYKKNGGITSANPAWDMFSAYNGMAA----GFFNGDWGVLLTALASNNKNDILA 444 + +TS + G +GV+L A+ ++ ++L+ Sbjct: 475 TNTSGQGLPPSLSLTSLASYGGFLAGIQGPVIPALEKLGIPAFGVVLHAMQQSSDVNVLS 534 Query: 445 TPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT----------------------- 481 TP I+T DN+ A VGQ+VP SG TS ++ Sbjct: 535 TPHILTSDNEEAEITVGQNVPFQSGFNPTSLGSLGAGVGGGAGALGGGLLGGLGGLGSLY 594 Query: 482 --VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKT 539 + R+ V KL V PQ+NE D + L I Q+ + S++ LGPT + R+ + V+ + Sbjct: 595 APITRQNVELKLTVKPQINESDYIRLVINQQTEEIA-STDPVLGPTTSRRSAKTTVIARD 653 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 ET+V+GG++ D + E VSKVPLLGDIPL+G LFR T+ + K NL++F+ P IIR + Sbjct: 654 QETLVIGGIMQDRTLESVSKVPLLGDIPLLGHLFRDTTRRKTKTNLLLFLTPYIIRGPED 713 Query: 600 YRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAPSSR 650 +R + + K RQ+ ++ G+ +P D S P P SR Sbjct: 714 FRVIFERKMKE-RQQFVEQFYGQ---------VPGYDVAVDFSRKPGPLSR 754 >UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseudomonas RepID=B1J7E4_PSEPW Length = 745 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 148/670 (22%), Positives = 272/670 (40%), Gaps = 86/670 (12%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 A P A E NF + I + ++G L + I V+G++S ++ ++ Sbjct: 91 ASATPPAAKDEQGDIVFNFTDQPIEAVINSVMGDLLHENYSISQGVKGSVSFSTSKPVTK 150 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 Q+ ++L ++I ++ + V ++P G L R+ PL Sbjct: 151 QQALSILETLLSWTDNAMIRQGERYVILPADKAVAGKLVPQVPVAQPATG--LAARLYPL 208 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 + A ++ LL+ + + ++ NV+ L G + + I DV + Sbjct: 209 RYIGASEMQKLLKPFVRENAF--LLVDPARNVISLAGTPDELANYQDTIDTFDVDWLKGM 266 Query: 193 Q--IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQ 249 + L+ AS +L L +L G MP + + ++RTNS++ IS + Q Sbjct: 267 SIGVYGLQRASVAELMPQLQKLFGPDSG---MPLSDMVRFMPNERTNSIVAISAQPEYLQ 323 Query: 250 RITSLLKSLDVEESEEGNTRVYYLKYAKATN---------------------LVEVLTGV 288 + ++++D E VY ++ KA + + L Sbjct: 324 EVGDWIRTIDEGGGNEPQLFVYDVRNMKAADLARYLRQIYGSGQINDDKAASVAPGLKTT 383 Query: 289 SEKLKDEKGNARKPSSSGAM--------------------------------------DN 310 S + G+ SG ++ Sbjct: 384 SLTSLNGTGSQSGQGLSGMGMNTQASIREAPSEDDYEDTGQPEASSAESADGSVKSLEES 443 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 V ITA + +N L++ + +++ + I RLD QV +E I+EV+ L+LGVQW Sbjct: 444 VRITAQKSSNQLLVRTRPAQWKEIESAIKRLDSPPLQVQIETRILEVKLTGDLDLGVQWY 503 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + + T G A A + M F + + V Sbjct: 504 LGRLAGNSSSTT-------------VANESGSQGALGAGGVALGSASMFYSFVSSNLQVA 550 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV-LSGSQTTSGDNVFNTVERKTVGT 489 L AL + +L+ PS+V L+N+ A VG ++P+ + T+ D ++VE G Sbjct: 551 LRALETRGLTQVLSAPSLVVLNNQQAQIQVGDNIPISQTTVNTSDSDTTLSSVEYVQTGV 610 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT--FNTRTIQNAVLVKTGETVVLGG 547 L V P++N G V ++I+Q+VS D S+ +T P ++R + V V++G+TV+LGG Sbjct: 611 ILDVVPRINPGGLVYMDIQQQVSDADDSAVTTTQPNPRISSRAVSTQVAVQSGQTVLLGG 670 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 L+ + + ++VP L IP +G LF TS R + L+V I P ++ + + R ++ + Sbjct: 671 LIKQDNGQSDTRVPGLSSIPGLGWLFGSTSKSRDRTELIVLITPRVVNNPEQARQVTADY 730 Query: 608 YTRYRQEQQQ 617 + + ++Q Sbjct: 731 RQQMQVLREQ 740 >UniRef50_O67320 General secretion pathway protein D n=1 Tax=Aquifex aeolicus RepID=O67320_AQUAE Length = 625 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 155/606 (25%), Positives = 271/606 (44%), Gaps = 37/606 (6%) Query: 28 YGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYG 87 F+ DI+ V + LGK ++IDP V+G I++ SN S+ E + F L G Sbjct: 18 VVLKFDEVDIKTVAVQVAKLLGKNLVIDPRVKGKITIISNGEISESEALELFSQALASQG 77 Query: 88 YSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQM 147 +S+I + +K+V ++ G + G G E VT + L+N A + LR Sbjct: 78 FSLILEKD-TMKIVPASQ-----GYPFTEIKAGKGGEFVTLVYKLKNTNASQVVSALRPF 131 Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAE 207 + G + + SN +I+T A ++NK+ +++ +D G E ++ L+Y + + Sbjct: 132 LSP--YGRIAFHAQSNSVIITDYADSVNKVKKILFYLDSGGGEV-RVYKLKYVKPSYVVK 188 Query: 208 ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES--EE 265 +LN + S + P I N++ + ++ + I ++ LD S E Sbjct: 189 LLNPFSTLSTKRYGEP----VVIAGVDEMNAVAVYANKEIHRIIEKVISDLDDPSSLEAE 244 Query: 266 GNTRVYYLKYAKATNLVEVLTGVSEKLKDEK---------GNARKPSSSGAMDNVAITAD 316 + + L + A + E L V + +K + +S + I D Sbjct: 245 RSFYIIPLNFVSAEEIYESLNSVFKGIKSVSVGTKKAKKGKGVQALTSITLKSGMKIGFD 304 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA 376 ++TNSL++ A +S E + I ++D RR Q+L+ A I+E + L G++W Sbjct: 305 KRTNSLILYATKSEYEAVREFIKKIDKRRKQLLLTATIIEASAKSILEAGIRWQILGTHG 364 Query: 377 QQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALAS 436 + GG + + + FF D L + L Sbjct: 365 GAAFKGSSLQDVYNAIKSGNFVIGGFSKSGTTVSIGG------IDFFFPDLVFLFSLLEQ 418 Query: 437 NNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQ 496 ++++ P I+TLDN+ A VGQ VP +G + N T + K VG +LK+TP+ Sbjct: 419 GTGFNVVSNPKILTLDNQEALIKVGQVVPFPTGIKYDVNGNPIITYDYKDVGLELKITPR 478 Query: 497 VNEGDAVLLEIEQEVSSVDS------SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 + G+ V L IE ++ + S + P + R + + V+V+ G TVV+GGL+ Sbjct: 479 IT-GETVRLVIELKLQEITGYLTNEVSGVNYTVPITSNRELNSDVVVENGRTVVIGGLIS 537 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTR 610 S + K+P LGDIP++G+LFRY E+ K +L +F+ P +I L++E Sbjct: 538 RKSLKSTEKIPGLGDIPVMGRLFRYDRDEKDKTSLFIFLTPYVITSPQELAKLTQEHEKL 597 Query: 611 YRQEQQ 616 R+ + Sbjct: 598 ARELMK 603 >UniRef50_A8UQX4 General secretion pathway protein D n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UQX4_9AQUI Length = 663 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 146/627 (23%), Positives = 270/627 (43%), Gaps = 53/627 (8%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 + NF N DI + +G+ +GK +++DP+V+G +++ + S +E + Sbjct: 27 AEEAKRKGEVVLNFQNTDIGELALFMGELVGKNVVVDPAVRGKVTLVFSKPLSLKEAWDV 86 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 F S L + GY V+ +KV+ T +A R EL + L A+ Sbjct: 87 FTSALFMQGYGVVE-GKKTVKVLPVNEAVT----VAKFKRKPAEGELAVLVFNLRYADAQ 141 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG-TEKQQIIHL 197 + +R + V + PSN LI+ I+K ++ +D G + ++ L Sbjct: 142 TVMNAVRPFLSP--FARVSMHSPSNSLIIADVGENIDKARRILSSLDRSGIEGEVRVYRL 199 Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS 257 + S +D +++ L S + +P ++S+ N+L++ P +A I ++ Sbjct: 200 RHLSVKDAVKLVTPLNSVFSKRFGIPLVVSSS----DEANALVVFAPAEAHGVIEEIISE 255 Query: 258 LDVEE--SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA---------------- 299 +D E SE + + LK+ A + E L + + A Sbjct: 256 IDTREVVSEVRSFYIIPLKFISAEEIAESLQSLLGGGRGRVSRAVNRPVQRTQKKGGSPQ 315 Query: 300 ------------RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 +K + + I D TNS+++ A +S E + ++I+ LD+RR Q Sbjct: 316 RKPQGNVRTQVVKKIGFITTKEGMKIGFDRGTNSVILYATKSEYEGIRSLISGLDVRRKQ 375 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP 407 VL+ A IVE + L++GV+W G + G Sbjct: 376 VLIAATIVEASTKSLLDIGVRWQILGKRG------GASFRGTSLSNIYSSFASGNFLMGV 429 Query: 408 AWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL 467 D+ A FF D +L + L + + +I++ P ++TLDN+ A VGQ VP Sbjct: 430 FSDVGRTVTVGDATFFFPDLVLLFSLLETGSGFNIISNPRVLTLDNQPAIIKVGQVVPYA 489 Query: 468 SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGD---AVLLEIEQEVSSVDS--SSNSTL 522 G + T + K VG +L VTP+++ + + L +E+ + V + + S Sbjct: 490 EGVKFDINGQPIITYDYKEVGLELNVTPRISGDNLRLTIGLNLEEIIDFVTNEIGATSYT 549 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 P + R + + V+++ G+TV+LGGL+ + + + VP L IP++G+LFR ++ K Sbjct: 550 VPVTSNREVNSDVVIENGQTVILGGLVSTKTLKTMEGVPGLWRIPILGRLFRRDVKQKDK 609 Query: 583 RNLMVFIRPTIIRDDDVYRSLSKEKYT 609 L +FI P ++ + +++E Sbjct: 610 TTLFIFITPYVVSSPEELTKITEEHRK 636 >UniRef50_C6CIN5 General secretion pathway protein D n=1 Tax=Dickeya zeae Ech1591 RepID=C6CIN5_DICZE Length = 696 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 228/671 (33%), Positives = 344/671 (51%), Gaps = 80/671 (11%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY 75 L + +Y A+F +I++FV Q L K I+IDPSV G ISVRS D + +Y Sbjct: 34 LAATTAANTSNKYSASFREVEIKEFVATAAQVLKKNIIIDPSVTGQISVRSYDDLDETQY 93 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 + FFL++++ YGYSV+ +DN L +V A + ++ R +V R+ ++ + Sbjct: 94 FVFFLNVMETYGYSVVQIDNHTLNIVPLAQSLRAAWTEGNTGREKN---IVVRLAKMDAL 150 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ-I 194 P +L P+L ++ + +Y P N+ I TGR + +L++++ +VD + + Sbjct: 151 PGSELEPILSRI-SEDVAVKLKYYSPGNLFIFTGREDVVKRLVDIVNQVDNARKDNSPAV 209 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 ++ A A D+A+ L + + L I + T ++++ G + I L Sbjct: 210 FNVSRAKASDIAKSLQSAFKNLSPEDKDAPL----IYGNDATRTIVVKGSAHVKTEIRRL 265 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK------------------ 296 + ++DV + + RV++LKYA A + ++ T + Sbjct: 266 ISTMDVPDQQS---RVFFLKYADAAQMAKLFTNNQSGSSEPGLLPMAGDSGMSMDAQLAQ 322 Query: 297 -------------------GNARKPSSSGAMDN---------------VAITADEQTNSL 322 GN P S N + + AD N+L Sbjct: 323 QQPGGMSSGQPVNPDGQAAGNGTAPVSGAGFSNDLGSLFGGGDALVRQIRVHADRDNNAL 382 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNT 382 +++A + A++I +LD+R QVLVEAI+VEVQ GLNLG+ W N+N G F Sbjct: 383 IVSAPPDAMRQAASIIRQLDVRHEQVLVEAIVVEVQQAEGLNLGIAWGNRNYGGSNFN-- 440 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDI 442 G NP + G+ AGF++G+WG L AL SN +N+I Sbjct: 441 ------------SVNVGNGFNQPNPLVNALKGTEGLVAGFYHGNWGTLFNALESNKRNNI 488 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDA 502 LATPS+VTLDN A FNVGQDVP+L+GSQTT+ DN+FNTV+R+T+G K + P++N+ Sbjct: 489 LATPSVVTLDNHRAEFNVGQDVPILTGSQTTNNDNIFNTVQRRTIGIKFSILPRINQSGT 548 Query: 503 VLLEIEQEVSSVDSS--SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 +LL I QE+SS+ + NS LG FN RT+ N V V+ ETVV+GGLLDD KE +KV Sbjct: 549 ILLNISQEISSLSDTAQVNSNLGSVFNIRTVNNVVQVQDDETVVIGGLLDDEKKETTNKV 608 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRID 620 PLLGDIP +G LFRYTS KRNLM+FIRP IIR + V + ++ + ++ R Sbjct: 609 PLLGDIPWLGNLFRYTSQNNDKRNLMLFIRPRIIRGNGVEAAQARRGASSSVADEAVRNF 668 Query: 621 GKSKALVGSED 631 +S+A G Sbjct: 669 SESQATEGPNA 679 >UniRef50_C8PXJ4 General secretion pathway protein D n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PXJ4_9GAMM Length = 813 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 184/675 (27%), Positives = 301/675 (44%), Gaps = 71/675 (10%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A A + +ADI+ F++ + K ++DP + G ++V SN S+QE Y Sbjct: 29 AAHAATGYKVHL--QDADIKAFIDQIATITQKNFVLDPRINGNVTVISNKPLSRQEVYDL 86 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 FL+++ + G I V V G+ D G ++ TRI L N A Sbjct: 87 FLAVMKVNGIVAIDRGLTTELVP--DTVAKQAGVDVDLRGNTAGSQMATRIYYLTNTNAN 144 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 D+ ++R MM + VV N +IL+ RA ++N+ ++I +D +K II L Sbjct: 145 DILNVIRPMMPPYANAAVV--PNVNAIILSDRADSLNQYAKLISDLDSNMNDKLTIIPLR 202 Query: 199 YASAEDLAEILNQLISESHGKS------------QMPALLSAKIVADKRTNSLIISGPEK 246 + A+ + ++L+ L G + I+AD ++ L++ G + Sbjct: 203 HVDAKRMMDLLSSLTGTGSGTAPAATGQSGQAAVASTGGSLINIIADPISDRLLVKGSAE 262 Query: 247 ARQRITSLLKSLD-VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS 305 ++ +++ LD V RV+ LKYA AT++ E+L G+ + + Sbjct: 263 MTAKVQRMVEQLDTVPTQRLSGLRVFRLKYASATHIAEMLRGLLAYQSINSSGDQTTLQA 322 Query: 306 GA---------------------------------------------MDNVAITADEQTN 320 + +I AD+ N Sbjct: 323 SSMFQSASNTSNNSALTTSNTAASPTGSPLNTSSTSNTTTTQNNGYQGRPFSIIADQTQN 382 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 S+++ A+ + ++ I LD RR QVL++A I+E+ + LGVQWA N + Sbjct: 383 SVIVNANPELMVEIENAINELDTRRDQVLIQAAIMEISGNDTQQLGVQWAMGNANSGVGV 442 Query: 381 NTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD---WGVLLTALASN 437 I +A G+A + +A + G + NG+ +G +L A+ Sbjct: 443 INFNNIGASAVGLASEILSKTPGTAAASVAGALLGIGTSKTDSNGNREFYGAILQAINKT 502 Query: 438 NKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVT 494 N ++L+ PSI+TLDN+ A+ VGQ+VP ++GS TT+ + F TV R+ VG L V Sbjct: 503 NNANLLSMPSILTLDNEKANILVGQNVPFVTGSYTTASNSSTTPFQTVSRQDVGINLNVI 562 Query: 495 PQVNEGDAVLLEIEQEVSS-VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 P + + +V LEI QEVSS VD + N+ G N I+ +L +TV LGGL+ D S Sbjct: 563 PHIGDNGSVRLEISQEVSSIVDGTLNNVSGVVTNKNLIKTTILADDQQTVALGGLMRDNS 622 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 KVP LGD P++G LFR S K NL+VF++PTI+R+ S++++ R Sbjct: 623 TYGQQKVPGLGDAPILGNLFRSKSKNSDKTNLIVFLQPTILRNGSAVASVTEKSLDGIRT 682 Query: 614 EQQQRIDGKSKALVG 628 Q + + Sbjct: 683 MQLVIDKNGTLKQIP 697 >UniRef50_Q4UYQ6 Type II secretion system protein D n=6 Tax=Proteobacteria RepID=Q4UYQ6_XANC8 Length = 690 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 180/640 (28%), Positives = 297/640 (46%), Gaps = 52/640 (8%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQ 73 +L M A+ + D+R F++ V + G T ++D VQG+++V S+ Sbjct: 20 SLTMLPLHAADAPAVRM--QDVDLRAFIQDVSRATGITFIVDTRVQGSVNVARAQAMSEA 77 Query: 74 EYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLE 133 + L++L G ++ +++ PG A + T++ L+ Sbjct: 78 DLLGMLLAVLRANGLIAVSSGPSTYRIIPDDTAAQQPGSAASGNL-----GFATQVFTLQ 132 Query: 134 NVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ 193 V AR A +L+ ++ G G ++ N L++ A + ++ ++ ++D Sbjct: 133 RVDARSAAEILKPLVGRG--GVIMAMPQGNSLLIADYADNLRRIRGLVAQIDTDRA-AID 189 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 + L +SA++LA L L ++ +S + ++ + +NSLI+ G QR+ Sbjct: 190 TVTLRNSSAQELARTLTTLFGQAGERSAV-----LSVLPVESSNSLIVRGDPALVQRVVR 244 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS---------- 303 LD G+ V L++A A L+ VL + + + + + Sbjct: 245 TALDLDGRAERRGDVSVVRLQHASAEQLLPVLQQLVGQTPGNEAEPGQETRPTAVDVAAS 304 Query: 304 ---------SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 + A I +N+L+I AD Q L VI +LD+ R QVLVEAI+ Sbjct: 305 AGAAQAQVIAPAAGKRPVIVRYPGSNALIINADPETQRALMDVIRQLDVHREQVLVEAIV 364 Query: 355 VEVQDGNGLNLGVQWANKNVGAQ------QFTNTGLPIFNAAQGVADYKKNGG------- 401 VE+ D LGVQ Q++ I A A + N G Sbjct: 365 VEISDTAAKRLGVQLLLAGRNGTVPLLATQYSGAAPGIVPLAAAAAGTRSNNGEDDSVLE 424 Query: 402 ---ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASF 458 +A + G+A + +G+++ A+ S+ +++L+TPSI+TLDN+ A Sbjct: 425 QARNVAAQSLLGLSGGLIGLAGQSNDAVFGMIIDAVKSDTGSNLLSTPSIMTLDNEQARI 484 Query: 459 NVGQDVPVLSGSQTTS-GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DS 516 VGQ+VP+ +G + DN F T++R+ VG +L+V PQ+N + L I+QEVS++ Sbjct: 485 LVGQEVPITTGEVLGAANDNPFRTIQRQDVGVELEVRPQINTAGGITLAIKQEVSAIAGP 544 Query: 517 SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYT 576 S + FN R I+ V+V+ G V LGGLLD ++ V KVPLLGD+P +G LFR+ Sbjct: 545 VSTQSSELVFNKRQIETRVVVENGAIVALGGLLDQNDRQTVEKVPLLGDVPGLGALFRHK 604 Query: 577 STERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQ 616 S R K NLMVFIRPTIIRD + ++ +Y R Q Sbjct: 605 SRNRDKTNLMVFIRPTIIRDAADAQRMTAPRYNYLRDRQL 644 >UniRef50_B7RHZ1 General secretion pathway protein D n=1 Tax=Roseobacter sp. GAI101 RepID=B7RHZ1_9RHOB Length = 644 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 164/634 (25%), Positives = 299/634 (47%), Gaps = 34/634 (5%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 L + + AL+ P A+ E + N ADI E V + G+T+++DP++ G ++ Sbjct: 8 LLALVFLAVTALVRPHVAQAQ-ETFVINLRGADISLLAEQVSEITGRTLVLDPNLTGDVT 66 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 V S + + + F SIL + G++ + ++V + +T Sbjct: 67 VVSQQSLDSEGVWALFQSILRVRGFAAVETG-AVWQIVPELDARTKGSP--QKIDTPGSQ 123 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 ++VTR++ L +P+ + +LR ++D G + E N +++T + +++++ + Sbjct: 124 DVVTRLLRLNRLPSAEAVRVLRPLID--EAGYIEAIEDPNAIVVTDTLANVDRIVAIATT 181 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 D + ++I YA A +A +++++ + +++ +S+ ++ + T I Sbjct: 182 FDGEAEMEAEVIRFTYAEAGTVATAISEVLGPAGTGARLSVDVSSNVLLVRGTQRDI--- 238 Query: 244 PEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS 303 + R ++ S V +SE +T +Y L++ +AT + +++ D Sbjct: 239 -SQIRSLARAMDTSPRVAQSETVSTSIYRLQFGEATIVADLVRNTLTGSTDLTNPVAASL 297 Query: 304 S----------------SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 + + V++ A +TNS+++ Q +++ +I LD+RR Q Sbjct: 298 GEDPANPDAQSFGSGPDAAPISPVSVQASIETNSVIVRGTQRQLAEVSQLIKALDVRRPQ 357 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP 407 V++EA IVEV LGVQ NT A + A Sbjct: 358 VMIEAAIVEVSGDVAERLGVQLGI-------GENTETGSIAATSFGNGGGSLQNVLVALG 410 Query: 408 AWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL 467 + + G++ G + +G L+ AL ++ ++L+TPS+ T+DN+ A+ VGQ+VP Sbjct: 411 QSNAAALSTGLSVGLASDSFGALIQALNTSTSANLLSTPSVTTMDNQSATIVVGQNVPFR 470 Query: 468 SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSSNSTLGPTF 526 +G TT G NV +ER+ VG + V P++ G V LEIEQEVSS+ + + Sbjct: 471 TGRLTTDGGNVAEVIEREDVGITMVVKPRITAGGVVQLEIEQEVSSLTNQAVTGAADLVT 530 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 N R I VL + G TVVLGGL+ D + KVPLLGD+P++G LF+ + R+KR L Sbjct: 531 NRRVINTTVLAENGGTVVLGGLITDDRLQNNQKVPLLGDVPVLGNLFKSRNNSRSKRTLF 590 Query: 587 VFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRID 620 VF+RPTI+ ++ +Y R + + Sbjct: 591 VFLRPTIMLTRADLEKAAETRYRRAQNAEATVQP 624 >UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMF5_AGRRK Length = 714 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 142/649 (21%), Positives = 278/649 (42%), Gaps = 73/649 (11%) Query: 25 NEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E Y N +A I + I+G L + ++DP V G ++++++ S+ S L Sbjct: 90 GEGYTLNLVDAPISAAAKSILGDILKVSYVVDPRVNGKVTLQTSQPVSRDALVDILESAL 149 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 + G +++ + ++V N ++ + S G + +++ L + A ++ + Sbjct: 150 AVNGAAIVRKGDS-YQIVPIGNSFSTTPAVTVPSATPSGPGVRVQVIELRFIGAEEMKSI 208 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYAS 201 L + GS+ + N+L+L G + ++ + + I DV + + L+ + Sbjct: 209 LEPISRPGSI--LRADTARNLLMLAGSNADLSAMRDAIATFDVDWMKGMSVALHPLKASQ 266 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA-RQRITSLLKSLDV 260 D+A+ LN + G P K V + R N++++ +A + + LD Sbjct: 267 PADVAKELNTIFGTQDG----PNAKLIKFVPNDRLNAVLVITSRRAYLSQAADWINKLDR 322 Query: 261 -EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV-------- 311 + E VY ++ A L +VL V + ++ + Sbjct: 323 IASTNEKQLFVYNIQNRPAKELAQVLQSVIAGQEKSAPSSSNAVAPDMAPTTLTGDATTT 382 Query: 312 --------------------------AITADEQTNSLVITADQSVQEKLATVIARLDIRR 345 ++ AD + N+L+I+ Q E + ++ +LD+ Sbjct: 383 EPAAANTNMASATASASTTAGDSTHTSVVADVENNALLISTTQREYEHIEQILKQLDVMP 442 Query: 346 AQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSA 405 QVL+EA+I EV + L G++W +N K G S Sbjct: 443 TQVLIEAVIAEVTLNDQLKFGLRWFFENG-----------------------KFGVGLSD 479 Query: 406 NPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP 465 +++ G A F + + G L AL+S +I++ P+++ L+N+ A+ VG VP Sbjct: 480 LSDGSTGASFPGFAWTFASSNVGATLNALSSITNVNIVSAPTLMALNNQKATLQVGDQVP 539 Query: 466 VLSG---SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV-DSSSNST 521 +++ S T+S + ++++ K G L V P+VN V+L+I+QEVS+V ++++ Sbjct: 540 IVTQQSASTTSSNTAIVSSIDLKDTGVILTVLPRVNSSGRVMLDIQQEVSNVVKTTTSGI 599 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 PT R + V+V E+V LGGL+ + S+VP+LG +P+ G F+ Sbjct: 600 DSPTIQQRKLSTKVIVDDNESVALGGLIQQSNTLNHSQVPILGKMPIFGNAFKNKEDTIN 659 Query: 582 KRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSE 630 K L++FI+P I+RD R +++E + + + + + Sbjct: 660 KTELIIFIKPRIVRDVRQARDVTEEFRNQLNLSSAVQKRRGGNSELEQD 708 >UniRef50_C6BTY5 General secretion pathway protein D n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTY5_DESAD Length = 671 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 154/639 (24%), Positives = 275/639 (43%), Gaps = 31/639 (4%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSV--Q 59 K + + + A + AN + + +FV+ VG++ G+ I+ + + Sbjct: 11 KFFVVLFLSMFLMVSAAAAQPEGGDGVHANLESIALDEFVKFVGRYTGRNIVFNKESLPR 70 Query: 60 GTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 +S+ + + ++ E F +L G+ +T DN V+ + KT I + Sbjct: 71 TFVSIYAGQSLTEPELMAVFQQVLSGSGFHAVTRDNVTY-VLPIRDAKTISPEIKAAPSK 129 Query: 120 GVGDELVTRIVPLE-NVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLI 178 G G+E++T + L + + +L Q+ +G V ++ +++ +NK+ Sbjct: 130 GNGEEIITSVFQLAGKMDPAKVQAVLTQV--KSRIGTVTSVPMADAVMVMDLQDNVNKMK 187 Query: 179 EVIKRVDVIG-TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTN 237 +++ + G ++ +I LE ++++ +A L + + A + + N Sbjct: 188 KLLGILKRAGAQQEHTLIELEKSNSKTVATKLTSFYKKLFTSGKTGAPPVIESLDW--AN 245 Query: 238 SLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG 297 SL++SG I SL+ LD ++Y L +A EVL + Sbjct: 246 SLLVSGSSDQIDTIKSLIGKLDRTSESYSKMKIYRLHNIEAVVAGEVLKSLISGGGIPSE 305 Query: 298 NARKPSSSGAM------------------DNVAITADEQTNSLVITADQSVQEKLATVIA 339 K S +G V ++ADE TN+L++ A ++ + Sbjct: 306 GNSKNSVAGDSAAKSSSSRDTSSASSNDSGGVQVSADEATNTLIVMAPTDQLSQIDNFVE 365 Query: 340 RLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKN 399 +LD + QV +EA+++E + GV+W G + A Sbjct: 366 QLDQAQDQVYIEALVLETTLDHAKEFGVEWQGGIDLGGSVATLGYTKAKDSNLSAYASNP 425 Query: 400 GGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFN 459 + + + AG G L+ S ++++ P I+TLDN A Sbjct: 426 SNVPGGYSMGVLGDTIS--YAGRSFPTIGALVNFTKSATDFNLISAPQIMTLDNAEAEIF 483 Query: 460 VGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVN-EGDAVLLEIEQEVSSVDSSS 518 VGQ+ P +G +TSGD V +T E K VG KLK+TP++N E V L++ Q ++V +S Sbjct: 484 VGQNRPYKTGQSSTSGDAVVSTYEYKDVGIKLKITPRINREDGLVKLKVYQTYNTVSEAS 543 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 + L P N R VL+ G T+V+GGL+ + VP L D+PL+G LF+ TS Sbjct: 544 TTEL-PITNDRKTDTTVLLADGSTMVIGGLIRADHTRTEAGVPYLSDLPLLGWLFKTTSN 602 Query: 579 ERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 K LMVF+ II+ + +LSK K +YR ++ + Sbjct: 603 SGNKNTLMVFLSARIIQTTEGLEALSKAKMDKYRNQRNR 641 >UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobium loti RepID=Q988A3_RHILO Length = 708 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 145/656 (22%), Positives = 279/656 (42%), Gaps = 69/656 (10%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFS 71 + + + ++ N NA I + ++G L ++DP VQGT++++++ S Sbjct: 77 SGAPVTKVTSDGSGKFELNLVNAPIADAAKAVLGDALHLNYIVDPRVQGTVTLQTSQPVS 136 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP 131 Q S L + + IT G ++V + + S ++ S G + +++ Sbjct: 137 QDALVDILQSALAVN-AAGITSRAGTYQIVPLSEIMASTPPVSVPSTSPSGPGVKVQVLQ 195 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 L+ + A ++ +L + GSV V N++ + G S +N + E + DV Sbjct: 196 LQFIAADEMKTILEPITRQGSVLRV--DSTRNIITVAGSDSDLNAIREAVSVFDVDWMRG 253 Query: 192 QQI--IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA-R 248 + L+ + E +A L+ + G P + + + R NS+++ A Sbjct: 254 MSVALHPLKTSKPEAVAAELDSIFGTKEG----PGAKLIQFIPNDRLNSVLVITSRPAYL 309 Query: 249 QRITSLLKSLDV-EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 R + + LD E+ E VY ++ A L VL+ V +G + + + Sbjct: 310 ARAATWINKLDRLAETNESQLFVYQIQNRPAKELASVLSSVLGTTVKTEGQSGGSNVAPD 369 Query: 308 MDNV------------------------------AITADEQTNSLVITADQSVQEKLATV 337 + + AD + N+L+I +++ + Sbjct: 370 QTPIAMQSDGVTPAPLTGPSPSLPQQDNQAPAHATVVADVENNALLIQTTARDYQRIEQI 429 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYK 397 ++++D+ QV++EA+I EV + L G++W +N G + Sbjct: 430 LSKVDVLPTQVMLEAVIAEVTLNDDLKYGLRWFFENGGTKVS------------------ 471 Query: 398 KNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 + + G + + V L AL+ ++++ P+I+ L+N+ A Sbjct: 472 -----VTDVAKAAAAATLPGFNWSYATDNIQVTLNALSKITDVNVISAPTIMALNNQKAI 526 Query: 458 FNVGQDVPVLSGSQTTSGDN---VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV 514 VG VP+L+ +G+ + N+V+ K G L VTP++N V+L+I+QEVS+V Sbjct: 527 LQVGDQVPILTQQSQDTGNGSAPIINSVQMKDTGVILTVTPRINNAGRVMLDIQQEVSNV 586 Query: 515 DSSSNSTL-GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLF 573 + +S + PT R +Q VLV GE++ LGGL+ + S+VP+LGDIP++G F Sbjct: 587 TKTDSSDIDSPTIQQRKVQTRVLVNDGESLALGGLIQQNNSVDRSQVPILGDIPILGNAF 646 Query: 574 RYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGS 629 + + L++FIRP ++RD + R ++ E + + + L Sbjct: 647 KQKDDTIRRTELIIFIRPHVVRDINEAREVTDEFRGKISLQTPIQKRRGGTKLQQD 702 >UniRef50_A3SDT6 General secretion pathway protein D n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SDT6_9RHOB Length = 631 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 166/642 (25%), Positives = 293/642 (45%), Gaps = 41/642 (6%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 M A E + N +ADI VE + + G+T+++DP + G ++V S + ++ + Sbjct: 1 MLPAPVRAQETFVINLRDADISLLVEQISEITGRTLVLDPGLVGEVTVVSAEALDKEGVW 60 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 F SIL + G+ + +V+ A +T+ G + VT ++ L +P Sbjct: 61 SLFQSILRVRGFVAVQAG-SIWQVIPEAEARTASGPNLGEEVIAGSQDFVTEMLRLNRLP 119 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 + + +LR ++ G + E N +++T + +++++ + + D + +++ Sbjct: 120 SAEAVRVLRPLV--AESGYIEAVEDPNGVVITDTRANVDRIMAIARSFDGDALVRSEVLR 177 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 A A + + +++ ++ A++ D +N L++ G + I SL Sbjct: 178 FRSADAVTVGSAILEVLGQAG--------TGARLSVDAGSNLLLVRGTPEDIAEIRSLAI 229 Query: 257 SLDVEESEEGN----TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG------ 306 ++DV ++ T V+ L+Y A + +++ G D + Sbjct: 230 AMDVAPRKDPREAVATTVFNLQYGDAQIIADIIKGTVGDATDITNAVAADVGAQSAEATS 289 Query: 307 -----------AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 A D V ITA +TNS+V+ + +++ ++ LD+RR QV++EA IV Sbjct: 290 DGQFVPLNRVVAPDAVNITASVETNSIVVRGTAAQVQEVGQLVHALDVRRPQVMIEAAIV 349 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 EV LGVQ N + N + G + PA S Sbjct: 350 EVSGEVAERLGVQLGL----GPNVPNGAIAASNFSNGGGVSLGSVLAAVGVPAGSALS-- 403 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG 475 G+ G D+G+L+ AL+ + +L+TPS+ TLDN+ A+ VGQ+VP +GS T G Sbjct: 404 TGLTLGAGGNDFGILVQALSQSTSARLLSTPSVTTLDNEPATIVVGQNVPFRTGSFATDG 463 Query: 476 DN--VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-NSTLGPTFNTRTIQ 532 + F T+ER+ VG + V P++ G V L IEQE+SS+ +++ N R I Sbjct: 464 NTATPFTTIERRDVGITMNVVPRITAGGVVQLVIEQEISSLTNANVEGAADLVTNRRVIN 523 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 V+ TVVLGGL+ D SKVP LGD+P+VG+LF+ + +R L VF+RPT Sbjct: 524 TTVMADNRGTVVLGGLITDDRINGSSKVPGLGDLPVVGELFKSRNARNTQRTLFVFLRPT 583 Query: 593 IIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPV 634 I+R + S ++ R + + + LP+ Sbjct: 584 ILRSREDITEASSRRFNRLKAADATQQPRTILKKQEVQQLPL 625 >UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUV6_SYNAS Length = 717 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 150/625 (24%), Positives = 264/625 (42%), Gaps = 60/625 (9%) Query: 24 ENEQYGANFNNADIRQ-FVEIVGQHLGKTILIDPSV---QGTISVRSNDTFSQQEYYQFF 79 N+ N + + +G+ L ++D + + I++R Sbjct: 116 ANQPVTLNAERVPLSDFVIYALGETLKVAFVMDEKMMNNKKPITIRMPQAMPPDRALNVI 175 Query: 80 LSILDLYGYSVITLDNGFLKV-VRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 L +L+ + + V I SS D + +IVPL ++ + Sbjct: 176 LGLLEKERIYLEERAGALYVLEVPPEPRSPVDVRIGVSSVDSPAD--ILQIVPLLHIRPQ 233 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQIIH 196 D+ PL++ + + + Y NV+IL GRAS + ++E I DV + +I Sbjct: 234 DVEPLIKDLFRSD--VEIKPYTRENVMILHGRASRMRPVLEFIATFDVPYLRDKNLLLIR 291 Query: 197 LEYASAEDLAEILNQLI-SESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR-ITSL 254 L Y E+ L +++ ++MP + K+ N+++ P+ R I Sbjct: 292 LTYWQTEEFISQLTKILEGLGFAVARMPKEPGPYFLPVKQLNAVLAVCPDGQTARTIRGW 351 Query: 255 LKSLDVEESEEG--NTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV- 311 + LD E+ T + KY++AT+L+E + + + +P++ V Sbjct: 352 KEKLDTPEAAGTEFKTYTFIPKYSRATDLLESIQKLYGSMPSSDSRMVQPAALTTPRGVP 411 Query: 312 ----------------AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 ++AD++ N ++I + V L ++ LD+ QVL+EA IV Sbjct: 412 ARPGSDRGDAFDAAGLRMSADDRKNMIIILSKPDVYRNLLNLLQALDVPARQVLIEATIV 471 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 E+ + L GV+W +N G + Sbjct: 472 ELTLTDELKYGVEWFIRNSWDGDSYTLGT---------------------LGKLGLEPLG 510 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS----- 470 A G + L++ALA +K +IL+TP ++ LDN A+ VG+DVP ++G Sbjct: 511 LTYAFLSRTGQFEALISALAEKSKANILSTPRLMVLDNMEATIQVGKDVPTVTGQISTLD 570 Query: 471 --QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNT 528 TT +V +++ ++ G LKV P +N + LEI QEVS + + P T Sbjct: 571 SVNTTDSTSVSQSIQYRSTGVMLKVKPTINTEGLMTLEITQEVSDIAETPGVGDSPIILT 630 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 R I +++ G+T+VLGGL+ + SKVPLLGDIP++G LF+ TS + K L+V Sbjct: 631 RRINTSIIAAHGQTIVLGGLMQENQSLGESKVPLLGDIPILGNLFKATSKTKDKTELLVL 690 Query: 589 IRPTIIRDDDVYRSLSKEKYTRYRQ 613 + PTI+ D + ++ + + Sbjct: 691 VTPTILTDPNDAVKITDQLRKELKW 715 >UniRef50_C0QPL4 General secretion pathway protein D n=1 Tax=Persephonella marina EX-H1 RepID=C0QPL4_PERMH Length = 669 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 143/615 (23%), Positives = 254/615 (41%), Gaps = 40/615 (6%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY 75 + E Q NF D++ + GK I++ ++G IS+ + S + Sbjct: 32 IQQAKEFKETGQVYFNFEKIDLKLLTYFISGLTGKNIVLSADIKGQISLIFPEPVSIDDA 91 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 + + SIL Y ++ F +V+ S + + +++VT + +N Sbjct: 92 WNIYTSILKSRNYILVDKG-SFYEVIPSGFSRNVTPPVKPE--LEESEDMVTYVYKFKNA 148 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT-EKQQI 194 +LR + G + Y P+N++I+T S I L +VI +D + ++ Sbjct: 149 DVTQAVNVLRGLKSPK--GLIFSYNPANIIIITDSQSNIKNLKQVISLIDTPSEGMEIKV 206 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 L+Y+S+ ++A L L S+ K + K K N++++ P + I + Sbjct: 207 YKLKYSSSGEIAAALTSLFSDLAKKG-----VQLKAYNLKSQNAVVVKAPSYVFKEIQDI 261 Query: 255 LKSLDVEESEEGNTRV--YYLKYAKATNLVEVLTGVSE---------------KLKDEKG 297 + LD R YLK +KA ++ VL + E Sbjct: 262 ISILDQPTPHPTYRRFWTIYLKNSKAEDIANVLNKLLENIRLVSLKEGAKKGKTQIKNLK 321 Query: 298 NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEV 357 KP S+ D + AD+ +NS++I A+++ E + ++ LD ++ QVLV A+I EV Sbjct: 322 TYTKPVSTQKTDRPKVVADKASNSIIIYANKTEYEAIKELVQNLDKQKKQVLVTALITEV 381 Query: 358 QDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG 417 + +GV+W G+ + G+ S + Sbjct: 382 SEQALKEIGVRWQVFGSQGGAAFRGGISKEGFYNIIGSTNFVAGVLSTSGENVEIGGNVL 441 Query: 418 MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN 477 + +I+++P I+T+DN AS NV Q P + N Sbjct: 442 FFPDLLFLFSLL-----ERGTGFNIVSSPKILTMDNIEASINVSQVTPFAQSVKFDINGN 496 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG------PTFNTRTI 531 + K VG LKVTP ++ + +++EI QEV+ V +G P + R + Sbjct: 497 PIINYDYKEVGLILKVTPHISGDN-IVMEIHQEVNEVIGYEKPQIGEISYVVPITSKREL 555 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 + V G+T+VLGGL+ + + + VP IP++G LF+Y S + K NL VF+ P Sbjct: 556 NTTITVTNGKTIVLGGLVSKKTIKTMEGVPFFSSIPIIGNLFKYRSEDLNKTNLFVFLTP 615 Query: 592 TIIRDDDVYRSLSKE 606 II + +++E Sbjct: 616 FIIEKPEDLARITEE 630 >UniRef50_A3VSK1 General secretion pathway protein D n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSK1_9PROT Length = 736 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 190/683 (27%), Positives = 317/683 (46%), Gaps = 66/683 (9%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN--DTFSQQEYYQFFL 80 A+ Y N+ AD+ Q + V G+ +IDP V G +++ S S E + FL Sbjct: 34 AQQGAYQLNYEGADLAQVAQDVAFQTGRVFVIDPRVSGRVNIVSPPGSALSSDEVWAVFL 93 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDL 140 + L + G++ + + K++ + ++ VTR+VPL+ VPA Sbjct: 94 ATLQVNGFAAVPIGEREYKIIPANQASRDGAAAGSAAVGTT----VTRVVPLQFVPAGTA 149 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYA 200 A LR + S+ V SN LI+ + +++L+ V+ R+DV + + I L+ A Sbjct: 150 AANLRALAGENSL--VTPIVESNSLIIVDTPNNVSRLLSVVDRIDVDKSVV-RSIPLDNA 206 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV 260 +A ++A L+++++ G+ S IVA +NS+++ G + R+ +++ LD Sbjct: 207 AASEVAATLSEIVNRPGGQGSR--QSSVSIVAVDASNSVVLRGEPEEISRLVPIIRELDS 264 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVS----------EKLKDEKGNARKPSSSGAMDN 310 + YL +A +V ++ + E + + + Sbjct: 265 PSRSQVALDTIYLNHANGAQIVPLIQALLNEPITVAVSGEDDEGRVTTTQSGRQNSGPRA 324 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 +I TNSLVI A Q + +++RLDIRR QVL+EA+IVE+ D LGVQ+ Sbjct: 325 SSIAFHAPTNSLVIKAPPETQRLIRGIVSRLDIRRPQVLIEAVIVEIADTTARELGVQYV 384 Query: 371 NKNVG----AQQFTNTGLPIFNAAQGVA-----DYKKNGGITSANPAWDMFSAYNGMAAG 421 + G A F++T + +AA D N + A + G + Sbjct: 385 SGGAGLPLSAASFSSTRPNVVSAAGAALFLNEQDDNDNVTTITTTSANGDVTVTEGQSYD 444 Query: 422 FFNGDW----------------------------------GVLLTALASNNKNDILATPS 447 + D GVLL+AL S++++++L PS Sbjct: 445 ANDPDLAIAGQLVEAAVQELLNFNGFLFGAGGETGDGGVYGVLLSALQSDSQSNVLQVPS 504 Query: 448 IVTLDNKLASFNVGQDVPVLSGSQTTSG-DNVFNTVERKTVGTKLKVTPQVNEGDAVLLE 506 IV LDN+ + VGQ+VPV++G S F +ERK +G L+V PQ+ G+ V L+ Sbjct: 505 IVLLDNEEGTIQVGQEVPVVTGEAVGSDFQGGFRQIERKNIGNILQVKPQITAGNTVQLK 564 Query: 507 IEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 + EVSS+ + + GP N + V + G+T+VLGGL+D ++ SKVP+LGDI Sbjct: 565 LNLEVSSLGAFAPDAQGPITNESILDLTVSAEDGQTLVLGGLVDKDRRQTESKVPVLGDI 624 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 PL+G LF+ + + LM+FIRPTI+RD S++ KY RQ+Q +R+ + L Sbjct: 625 PLLGNLFKGQAQSDQESTLMIFIRPTILRDAQAADSVTARKYDYVRQQQMRRLREGQRPL 684 Query: 627 VGS-EDLPVLDENTFNSHAPAPS 648 + + + + PAP Sbjct: 685 LDTVVQDYIGPGADYVPSQPAPD 707 >UniRef50_Q2G4Y4 Type II and III secretion system protein n=3 Tax=Sphingomonadaceae RepID=Q2G4Y4_NOVAD Length = 748 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 189/702 (26%), Positives = 303/702 (43%), Gaps = 93/702 (13%) Query: 28 YGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYG 87 Y N ADIR FV + G+T ++D VQ ISV S+ S+ EY++ FLS L G Sbjct: 30 YTLNVREADIRAFVADAAEVTGRTFIVDSRVQAKISVVSDRPLSRSEYFEVFLSTLRANG 89 Query: 88 YSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQM 147 + NG ++ + T+P I ++VT +V L + A LR + Sbjct: 90 LVAVPTGNGAFRIQPAEGAATNPTRIGSRGAAQS--QMVTEVVRLRTIDAAQAVETLRPL 147 Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAE 207 + G + + N L++ A + ++ ++ +D T Q +I LE+A A ++A Sbjct: 148 VSKE--GAITANKAGNSLVIVDYADNLRRIRALLGDIDRDSTTTQTVI-LEHAGAREIAT 204 Query: 208 ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGN 267 L QL+ A A +VA N++++ G R++++ + LD + + G Sbjct: 205 ALTQLVPA----GAEGARALATVVAVDSANAVLMRGDGSTLSRLSAMARQLDAKAALGGE 260 Query: 268 TRVYYLKYAKATNLVEVLTGVSEKLKDE-------------------------------- 295 +V +L YA + LV VL + Sbjct: 261 IKVVWLDYADSAALVPVLERLIGGQGGGEVASASAAPISLGGVGSNATSTAGTQGSTGQA 320 Query: 296 -----KGNARKPSSSGAMDNVAITADEQTNSLVITADQ-----------SVQEKLATVIA 339 + ++SG + N I + IT Q +L+ +I Sbjct: 321 ASTGGSSTSPIGATSGGLGNGPIKLANGRGTATITRYPGANAIIIAAPADEQRRLSELIR 380 Query: 340 RLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG----AQQFTNTGLPIFNAAQGVAD 395 +LD+ + QVLVEAIIVE+ + LGVQ ++N+ I + A G+ Sbjct: 381 QLDLPQEQVLVEAIIVEISNDVAKELGVQMLFGGKNMPFAVTNYSNSSPNIIDIAGGLLA 440 Query: 396 YKKNGGITSANP------------------AWDMFSAYNGMAAGFF-----NGDWGVLLT 432 N T N A + G GF + G ++ Sbjct: 441 DNLNQTTTVVNGDTVTTTTNSTAGDLLRENAASKLLSARGAYTGFLTELSKDTYLGAIIN 500 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--NVFNTVERKTVGTK 490 A+ ++ ++IL+TP I T +N AS GQ++PV +G + G+ + F T++R+ VG + Sbjct: 501 AVQTDKNSNILSTPHITTNNNVPASILFGQEIPVSTGEALSGGNFSDTFRTIQRQNVGIE 560 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF-NTRTIQNAVLVKTGETVVLGGLL 549 L VTPQ+N + + L++ QEVSS+ + + T N R I+ V V E V LGGLL Sbjct: 561 LDVTPQINASNMIRLDLRQEVSSIAGTVSKTSNELIVNKREIKTTVTVGDREIVALGGLL 620 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 DD + + KVPLLGDIP++G+ F+ + R K NLMVFIRPTI+R+ ++L+ +Y Sbjct: 621 DDNEQRTLQKVPLLGDIPILGEAFKSRARSRVKTNLMVFIRPTILRNAADRQALAARRYG 680 Query: 610 RYRQEQQQRIDGKSKALVG------SEDLPVLDENTFNSHAP 645 R Q + + + LPV AP Sbjct: 681 VVRDAQVKFDSKREPTIDDLIVDYMGATLPVAPSAEVAVVAP 722 >UniRef50_A9GDS2 General secretion pahtway protein D n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GDS2_SORC5 Length = 864 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 167/642 (26%), Positives = 280/642 (43%), Gaps = 57/642 (8%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG-TISVRSNDTFSQQEYYQFFLSILDL 85 + N + AD+ + V+ + G+ + ++ +V + + + E Y FL+IL Sbjct: 108 KVSFNLDEADLPELVKAISNITGRRFIYGGKLRQIKATVYAPEKVTVAEAYSAFLAILAS 167 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 +VI V V + + ++ D VTR+ L ++ A + +L Sbjct: 168 NDLTVIPHGRFLKIVETPGAVSETTPVFGTAAPVPAEDRFVTRMYRLSHIDANEAGGVLS 227 Query: 146 QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII-HLEYASAED 204 + G+V Y P N+LI+T + I +++ +++ +DV G Q + + Y SA + Sbjct: 228 KFKSKD--GDVTVYPPGNLLIITDTGTNIQRMLRIVEEIDVGGAGDQLWVQPVHYGSAAE 285 Query: 205 LAEILNQLISESHGKSQMPALLSAK----------IVADKRTNSLIISGPEKARQRITSL 254 +A LN+++ S G + I+AD RTNSLII+ E R+ + Sbjct: 286 VATKLNEIVDPSRGAAGGGRPGRGGAGGAGGTGARIIADDRTNSLIITATEPDYLRVLGI 345 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEK------------LKDEKGNARKP 302 LK LDV ++ EG V L++A L L V Sbjct: 346 LKRLDVAQTGEGQVHVLSLQHAGCKELSATLNQVLSGGSGGGAPVGGRPGARAAPAVPGS 405 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 + V +T DE +N L+IT+ +L VI LD R QV +EA+I++V Sbjct: 406 TDDIFEGQVKVTCDEASNKLLITSSPHDYAQLRAVIDELDEPRRQVFIEAVIMDVNVSRS 465 Query: 363 LNLGVQW--ANKNVGAQQFTNTGLPIFNAAQGVADYKK-NGGITSANPAWDMFSAYNGMA 419 L+ G+ + G + N Q V G + + + N + Sbjct: 466 LDFGIGYHAGAPFNGLNPDDSVVYGGNNIRQSVIGLPAQLGALALGIKGPAITGSNNILG 525 Query: 420 AGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--- 476 G +GV+L ALA + +++LATP I+ DN A ++GQ++P+ + + Sbjct: 526 TGISIPAFGVVLHALAQDGDSNVLATPHILATDNVAAEISIGQNIPLQTNVGGGGLNQLA 585 Query: 477 ------------------------NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 V T R+ VGTK+KV P VN+ D V LE+ +E+S Sbjct: 586 SLAGGAGAAAGGLGGLAGLLGGLGGVGGTAARQDVGTKIKVVPHVNDSDQVRLELSEEIS 645 Query: 513 SVDSSSNSTLG-PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 + LG N RT ++V+ +TVV+GGL+ D +K+P+LGDIP++G Sbjct: 646 DAGAPLEGALGAIPINKRTASTTLVVRDQQTVVIGGLMRDGMTTSETKIPVLGDIPVLGF 705 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 LFR + K NL++ + P +IRD D R++ + K ++ Sbjct: 706 LFRQRVKTKTKTNLLLVLTPYVIRDQDDLRTIFERKMQERQE 747 >UniRef50_A6Q682 Type II secretion system protein D n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q682_SULNB Length = 678 Score = 384 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 155/674 (22%), Positives = 296/674 (43%), Gaps = 42/674 (6%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 MK L KI +L + A++E NF + ++ F+E+V + K ILID ++G Sbjct: 1 MK-LTKILLGILLIFTIA-LQAADDETVNVNFRDLSVKDFIEMVSKITQKNILIDTDLKG 58 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 I+ S + SIL G ++I F KVV+ + ++ S Sbjct: 59 KINFVSTKPIKKSSLIPLANSILRSKGLALIDQGE-FYKVVKGSTAAGEGLDVSSSI--- 114 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 G+ + T + PL+N A + ++ +++ ++ ++ +NVL +T T+ + ++ Sbjct: 115 NGETMKTVMFPLKNSNAAVVRAKIKPLLNRND--KIISFKENNVLAITATPRTLQSISKI 172 Query: 181 IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 IK V+ G ++ ++ L+ AS +++ + + + ++ I D+ TNSLI Sbjct: 173 IKAVEKRGVKRSVVVKLKNASVKEVFPNVQNMAKKLFPQTIESE--KVDIFKDEATNSLI 230 Query: 241 ISGPEKARQRITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA 299 + G E +R+ +K LD + + + V LK + + ++++ + ++ + Sbjct: 231 LVGKEDNDRRMIKYIKQLDQKGDDQTQKMYVLRLKNSNVEEMEKIMSKLISQMNNM-ATK 289 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 R + +D + N+L++ A + + ++DI + QV V+A IVE+ Sbjct: 290 RPKKGGKPPSKAMVVSDIERNALIVLATGEQMRNIRETVRKIDIPKVQVYVKAKIVEIDK 349 Query: 360 GNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMA 419 +G+++ L A + G + N G Sbjct: 350 NMAEQVGMKYGMNGGTITSSGLFTLAGNMGASALQMSPALLGFLNTNNTKTYTDPVTGSV 409 Query: 420 AGFFNGDW-----------GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS 468 N + G L L N +L+ PS++ +NK A VGQ +L+ Sbjct: 410 IQENNPAFKFDSTDKAFALGAALDLLEKNGAAHLLSEPSVLCTNNKEAEIYVGQTRSILT 469 Query: 469 --GSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN-STLGPT 525 TT+ NV N R+ +G LKV P+++ + V LE+E + +D SS PT Sbjct: 470 QAQQSTTAISNVINNYSREDIGLTLKVKPRLSSNNQVTLEVETVLEDIDPSSEQVEDRPT 529 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ-LFRYTSTERAKRN 584 RT++ +V+ GE ++LGGL+ + +SKVP LGDIP++G+ LF +T ++N Sbjct: 530 TTKRTVKTNAIVRNGEMIILGGLIKRAGGKNISKVPFLGDIPVLGEMLFTHTGDVEREQN 589 Query: 585 LMVFIRPTIIRDDDVYRSLSK---------EKYTRYRQEQQQRIDGKSKALVGSEDLPVL 635 +++++ P I+R + L + +Y R ++ ++ GK + +P Sbjct: 590 VVIYLTPYIVRKSGDLQKLKEMLAELEEVQVRYNRLVEQALEKNKGKHHSSPAKALVP-- 647 Query: 636 DENTFNSHAPAPSS 649 + P P+S Sbjct: 648 ----KTEYVPEPAS 657 >UniRef50_Q5ZVW8 Type II protein secretion LspD n=7 Tax=Legionella RepID=Q5ZVW8_LEGPH Length = 791 Score = 384 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 196/678 (28%), Positives = 314/678 (46%), Gaps = 98/678 (14%) Query: 31 NFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSV 90 N NADIR + V + GK +IDP VQG +S+ S+ S +E YQ FLS+L + GY+ Sbjct: 136 NLRNADIRAVIAEVSRITGKNFVIDPRVQGKVSIVSSTPLSSRELYQVFLSVLQVSGYAA 195 Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA 150 I + SP +++ P GD+++ ++P+ VP+ L P+LR +M Sbjct: 196 IPNGEIIKIIPNIDAKTQSPDLLSGMKSPPRGDDMMVAVIPVHYVPSEQLVPVLRPLMPQ 255 Query: 151 GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILN 210 S +V Y PSN+LIL+GRA+ I L E+IK+VD ++ L +A A D+A L Sbjct: 256 WS--SVSAYAPSNMLILSGRANNIKSLAEIIKQVDSSSANGIDMVRLHHALAMDVANTLK 313 Query: 211 QLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEE--GNT 268 L+ G + + I AD R+NS+++SG + R R+ L+ LD + S NT Sbjct: 314 DLVKTQPG---IGSRTQITIAADDRSNSILVSGSKTDRIRLRMLILKLDKDSSTGVNSNT 370 Query: 269 RVYYLKYAKATNLVEVLTGVSE-------------------------------------- 290 +V YL Y +A +LV +L G+++ Sbjct: 371 QVVYLNYLRAEDLVPILAGIAQANFSGNVGTTIGTITRPALDSTNPASSLANTSADGQSS 430 Query: 291 ---------------KLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLA 335 +A + V I + TNS+++ A S+ L Sbjct: 431 SLSSTSTSSAPMNASGATANTTSASTQNEGSTKPTVQIIGEPNTNSIILNAPASIIRILK 490 Query: 336 TVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVAD 395 TVI++LDI+ AQ+L+EA++ EV + + NLG++W + Sbjct: 491 TVISQLDIKPAQLLIEALVAEVDEKDVNNLGIEWGSNQQTGNPK---------------- 534 Query: 396 YKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKL 455 D + + + D+ + ALA + +IL+TPS+V LDN+ Sbjct: 535 --------------DFRPGFAIINSKTRIDDFQAQIYALAREQRANILSTPSVVVLDNRQ 580 Query: 456 ASFNVGQDVPVLSGSQ-----TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE 510 A +G+ V + + S T+ + F T +R V L V PQ+ G + L+I+Q Sbjct: 581 AKILIGKQVSIATTSYPNNAGGTTTASPFTTFDRVNVALHLYVRPQITRGQGIQLQIDQG 640 Query: 511 VSSVDSSSNSTLGPT---FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 ++D ++ +T T FN +I +V V++G+ VVLGGL+ D +K+P+LGDIP Sbjct: 641 NDTLDPATATTDNTTTPTFNISSIVTSVHVESGDIVVLGGLIQDSIGNDNNKLPILGDIP 700 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALV 627 +G+LF+ R KR LMVFI+P I+R++ ++ EKY RQ Q I + Sbjct: 701 GIGRLFQRNIRNRDKRVLMVFIKPIILRNERDNLHVTGEKYNYVRQYQLDWIRSQEAFEQ 760 Query: 628 GSEDLPVLDENTFNSHAP 645 ++ + N P Sbjct: 761 TDDETVLPPLTQGNLPVP 778 >UniRef50_C0QK68 GspD2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QK68_DESAH Length = 761 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 139/641 (21%), Positives = 270/641 (42%), Gaps = 83/641 (12%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 ++ NF+NAD+ + V + + L L++ + G +++ + + E + F Sbjct: 137 ESKPGGLVLNFDNADLYEVVRTMAEILKINYLVEKDISGAVTIHTAGQLKRDELFYVFYQ 196 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV---GDELVTRIVPLENVPAR 138 IL++ G + + + ++V P + S+ G G+ ++ +IVPL+ + A Sbjct: 197 ILEINGLTAVRDGD-LYRIVALNEASRMPIGLRTSTDDGEISHGERVIIQIVPLKFISAV 255 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK--RVDVIGTEKQQIIH 196 ++ ++ + A G +V SN+++L + + I+K + ++K VD+ ++ Sbjct: 256 EMTKIITPFISAD--GTIVSQADSNMMLLVDKGTNIDKALRLVKVFDVDIFKRVDHRLYT 313 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRITSLL 255 + +A ++ + LNQ + K++ R N+++ + +I L+ Sbjct: 314 MAHADPTEIMQTLNQFFTSYGQSLG----KDVKLIELGRLNAIMAISSKSEIFDKIDELI 369 Query: 256 KSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN---------------- 298 LDV + E +Y ++ +A+ L ++L+ + K+ Sbjct: 370 SLLDVPVDGYEPRIFIYNVRNGEASELGDLLSTIFSGKKESPSEDKNIKSSSKKEPSQAM 429 Query: 299 ----------------------ARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLAT 336 SS ++ I D N+L+I A + + + Sbjct: 430 LPVQIVSKKEINDPKTKARPTPNSISGSSSLNTSINIIPDAIRNALIIEATPADYQVVLD 489 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADY 396 V+ RLD+ QVL+E + EV + +LGV+W + Sbjct: 490 VLKRLDVLPRQVLIEVTLAEVTLNDSSSLGVEW-------------------------TF 524 Query: 397 KKNGGITSANPAWDMFSAYNGMAAGFFNGD-WGVLLTALASNNKNDILATPSIVTLDNKL 455 K+GG + + N + F N W LTALAS +IL++PS++ DNK Sbjct: 525 IKDGGSVADGLIQGTLGSTNVLQYNFGNTQKWAATLTALASKGDVNILSSPSVLASDNKE 584 Query: 456 ASFNVGQDVPVLSGSQ---TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS 512 A ++ +VPV++ T D + ++ + G L VTP +NE V +EI QEVS Sbjct: 585 AKIDISTEVPVVTTEYKYGTDGDDMLATNIQYRNTGVILTVTPHINERGLVSMEINQEVS 644 Query: 513 SVDSSSNSTLG--PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 + + P+F R++Q + V +T+ +GGL+ ++ + +PLL +P Sbjct: 645 EQADAVLAGGQEYPSFYKRSVQTTLTVNDNQTIAIGGLMRKKEEDSSAGIPLLNQLPFFK 704 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 LF T+ K L++ I P ++ D D ++ E R Sbjct: 705 YLFGKTAGGNEKNELIILITPRVVSDLDDIDQVTNEFRQRV 745 >UniRef50_C0GQP0 General secretion pathway protein D n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQP0_9DELT Length = 703 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 136/632 (21%), Positives = 256/632 (40%), Gaps = 58/632 (9%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 AE +F +AD+ + + + Q L + LI P V G +S+ D F+ ++ Sbjct: 92 PAEARDVSFSFYDADLVEVIRVFMQLLEEDYLIHPGVSGRVSLFVKDRFNARQMLGVLEG 151 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG--DELVTRIVPLENVPARD 139 +L + ++I D + S PG + + + L+ + A++ Sbjct: 152 VLRVNNAAMIRSDQILEFLPLSRVPGHIPGELIILPDREELPRRGQIIQGFGLDFIAAQE 211 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV--IGTEKQQIIHL 197 + ++ + + V +E VL+++ ++ K+ +I D ++ L Sbjct: 212 MVNIIEPHLSGDAR--VYAHEEKGVLLVSDYPHSLEKVSRLISLFDESIFADVLARVYPL 269 Query: 198 EYASAEDLAEILNQLISESH-GKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLL 255 Y A + A+ L ++ + ++ + +R N ++ ++ E + + + Sbjct: 270 RYIEAGEAAQKLENILERFGMDRDRVGRQARVSFLPLERLNMVLAVTRSETVLSFVQAWV 329 Query: 256 KSLDVE------ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS------ 303 + LD S N VYY++Y A +VE L GV ++ + + + Sbjct: 330 EGLDRPVPEHILGSAGENIYVYYVQYGDAEEIVESLRGVFDQGVEADSEVGREAVSEVAS 389 Query: 304 ------------SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 S V T D TNS++ ++ +V+ +LD+ QVL+E Sbjct: 390 EDDQDVFAPGMVSGELAGPVRFTVDRATNSIITRCRAPDYARVLSVMEKLDLYPKQVLIE 449 Query: 352 AIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM 411 II EV+ + +GV W + + G +PA D Sbjct: 450 VIIAEVRLSDATKMGVDWQYILSFGDRLS--------------------GELRFDPAADA 489 Query: 412 FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS- 470 G+ + L A + K IL+TP+++ DN+ A+ N+G VP + + Sbjct: 490 LPGAGGVFRVESSRRLKAALYAAVDDAKLQILSTPTLLASDNRPATINIGDQVPFPTSTR 549 Query: 471 ----QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS-SNSTLGPT 525 T + + + T++ + G L+VTP++N V +EI QEVSS+ + P Sbjct: 550 QRLDDTDTSEVIDTTIQYRDTGIILRVTPKINRHGMVRMEIVQEVSSLTARRVEGITAPV 609 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 NTR + + V ET+V+ GL++ S VP IP+V LF + T L Sbjct: 610 INTRHAETTLAVDDQETIVIAGLMEQERSRGYSGVPGFRRIPVVKHLFGTSETRFENTEL 669 Query: 586 MVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 +VFI P +I + L++ TR + +++ Sbjct: 670 LVFITPHVIMSREDSGFLTRNFLTRLEELKER 701 >UniRef50_C1TK46 General secretion pathway protein D n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TK46_9BACT Length = 659 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 159/602 (26%), Positives = 276/602 (45%), Gaps = 28/602 (4%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 L+ E+ NF + D+ +F+ + + L K I+I P+V+GTI+V S + S E Sbjct: 41 LIEAAKAMRESGSVQFNFTDLDVVKFIRFMSELLQKNIIIAPNVKGTITVMSPRSVSLAE 100 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 Y+ L+ L++ G S+ + + + KV++ + PG G+++V ++VPL+ Sbjct: 101 AYKIMLTTLEMNGLSLEDMGD-YYKVLKGGTT-LENRAVRSRIGPGYGEQVVNQVVPLDF 158 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD-VIGTEKQQ 193 V ++ AG V+ + N L+LTG A+ + +++ +++ +D G + Sbjct: 159 VSPGFAQKAVQP--AAGKTVMVIPLDEGNGLLLTGPAADVQRVVNLLRALDVPDGIRRIS 216 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 + ++ A+ + LA+ L L + G ++D + +L++ G A + Sbjct: 217 AVPVKEANPDLLAQHLANLAKDPTG-----PFRGLTALSDSSSRTLLLVGDSSALESAKK 271 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAI 313 ++K LDV G VY LK A A + + L+ + AR + Sbjct: 272 IVKRLDVPPVS-GEFHVYRLKNADAQEVAKQLSQILGV------AARLQPGKEGAMPTTV 324 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA--N 371 D TNSL+ + L +I +LDI+ QV+V +I EV N N G+ WA Sbjct: 325 VPDIPTNSLIFAVQEQQYAGLIDIIKQLDIQPKQVMVRGLIAEVNLTNLKNAGIDWATWG 384 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG------MAAGFFNG 425 V + + + + S ++ + G N Sbjct: 385 GQVSGSTVFAANAALGGSTGVPSTFVDWFQDLSKKETYEWITPETGEPYREKTTVYEGNS 444 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD--NVFNTVE 483 + L + +IL+ P ++ DNK +S VGQ +P + S + + +V N+ + Sbjct: 445 LIYAYVQLLKKYDAMNILSMPRLMCTDNKESSLMVGQTIPQMKASTSDISNPSSVQNSYD 504 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETV 543 K G KLK+TP + G+ V L+IEQ V S+ ST P R ++ +V V+ GET+ Sbjct: 505 YKDTGLKLKITPHIRSGNLVALDIEQSTEEVLSAMTSTT-PVTAKREVKTSVQVRNGETI 563 Query: 544 VLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 +LGGLL + K +VP+L IPLVG+LF+ ++ +R K LMVF+ P I+ + Sbjct: 564 ILGGLLKETEKSLKQRVPILSYIPLVGELFKSSTNQREKIELMVFLTPYILETPEAATEA 623 Query: 604 SK 605 SK Sbjct: 624 SK 625 >UniRef50_B4UDG8 General secretion pathway protein D n=4 Tax=Anaeromyxobacter RepID=B4UDG8_ANASK Length = 904 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 171/679 (25%), Positives = 312/679 (45%), Gaps = 84/679 (12%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSV-QGTISVRSNDTFSQQEYYQFFLSIL 83 ++ FN A++ +E + + + V +G I++ S + +E Y FL+ L Sbjct: 118 QGRFMLTFNRAEVVDVLEQASRWTCRNFIYTEDVARGKITLLSKTPVTAEEAYAAFLAAL 177 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIAD--SSRPGVGDELVTRIVPLENVPARDLA 141 + +V + ++ R+A+ K P S ++++T+++ L+ A L Sbjct: 178 NANNITVYPTG-RYWRLGRAADSKKMPIPTYTDPESGTPASEQVITKVIRLQYADADQLR 236 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK-QQIIHLEYA 200 ++ + ++ PS L++T I ++ ++I+ +D +G +I+ + YA Sbjct: 237 GVMGNFISPQG-ADIQSIPPS-TLVITDTGLNIRRIEKMIEAIDKVGGGDLVRIVQVRYA 294 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSA----------------------KIVADKRTNS 238 SA+DLA+ +NQ+ G+S PA +S+ K++ D RTN Sbjct: 295 SAKDLADKVNQIFQAQGGRSPRPARISSGPARPGVPTTQPAGGSVEVSVYKVLPDDRTNK 354 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 LI+ EK+ Q+I L++ LDV S +G V +LK A A L L+ +++ Sbjct: 355 LIVIADEKSFQQIMELVQQLDVPTSADGGVHVLFLKNANAEELATTLSNLAQGQAKRTTT 414 Query: 299 ARKPSSSGA---------------------------MDNVAITADEQTNSLVITADQSVQ 331 P+ A V ITAD+ N+L++ A + Sbjct: 415 PGAPTQPAARPVGMPGAPPAAAAAPTPAGDVTAELFSGEVKITADKTQNALLVQASGADF 474 Query: 332 EKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQ 391 + ++ +LD R QV VEA+I+EV N + LGV A+ + + +TG+ ++ Sbjct: 475 SAVQRLVEKLDRPRRQVFVEAVIMEVNLKNSMELGVS-AHGAIPYKYKGDTGVIPLSSQT 533 Query: 392 GVADYKKNGGITSANPAWDMFSAYNGMAAGFFN----GDWGVLLTALASNNKNDILATPS 447 G + + ++ G+L+ AL SN+ ++L+TP Sbjct: 534 GRVNSLDMSSAIALGGFLTGYTGPISAELKDLGFGNIPSLGLLIQALQSNSDVNVLSTPH 593 Query: 448 IVTLDNKLASFNVGQDVPVLSG-------------SQTTSGDNVFNT---------VERK 485 ++ DN+ + VGQ+VP SG S T++ + T ++R+ Sbjct: 594 LLATDNEESEITVGQNVPFQSGYAPSGLSNLLSGSSATSTVGSALGTQGLSSLYAPIQRQ 653 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 V KLK+ PQ+NEG + L IE++ + + LGPT R+++ ++ + T+V+ Sbjct: 654 NVELKLKIKPQINEGGNIRLTIEEQTEEIAE-KDPQLGPTTAKRSVKTQIVARDQSTIVI 712 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL+ D + VSK+P LG +P++G LFR T+T + K NL++F+ P IIRD+ YR + + Sbjct: 713 GGLIQDRAIRSVSKIPFLGSLPILGWLFRDTTTTKQKVNLLLFLTPYIIRDEADYRRIYE 772 Query: 606 EKYTRYRQEQQQRIDGKSK 624 +K +Q +Q + + Sbjct: 773 KKREEQQQFIEQFYGRQPR 791 >UniRef50_Q82WH1 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Nitrosomonas europaea RepID=Q82WH1_NITEU Length = 697 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 135/637 (21%), Positives = 254/637 (39%), Gaps = 57/637 (8%) Query: 20 AGHAENEQYGANFNNADIRQFVEI-VGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A E++ NFN ADIR +++ +G+ L ++ P+VQG I++R++ S+ Sbjct: 82 AFADTGERFELNFNEADIRGVIDVVLGEMLKLDYVVSPAVQGRITLRTSRPVSKASLLSA 141 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 + L ++ + + S + +S I+PL + A Sbjct: 142 LEAALGTVSAVILKDEQTISVLPWSEAPQRVRPAQRFASAMPPTPGYAVEIIPLRYINAN 201 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 D+ +L + G V + L++ G + ++ I+ DV L Sbjct: 202 DMQAILDSFVPKGIV--LQADTRHGHLVVAGSSQDRGAILHTIENFDVDWLNGM-TFALY 258 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSL 258 S L I+ +L G+ + + ++ L ++ + + + ++ L Sbjct: 259 KLSQSRLEAIVTELREIFQGEIDLFTTRIHLVPLERMQAVLGVAQNKSDLELLREWIERL 318 Query: 259 DVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN-------- 310 DV + VY ++ A +LV L V + S + Sbjct: 319 DVSKLGAQRIFVYNVQNGNAKDLVAPLRQVLTGEMQATTASGTTVSPTSTPMSTPQMPAA 378 Query: 311 -----------------VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 + A E+ NSL+ + + + ++D+ QV++EA Sbjct: 379 APSLSAEPSISGSQTNVGRLVAIEENNSLMFYGTEDEFRVIQEALKQIDVLPRQVMIEAF 438 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 + EV N L GVQW D +N SA + S Sbjct: 439 LAEVTLNNNLRYGVQWFF-----------------------DSGENTVTLSATDVGSVAS 475 Query: 414 AYNGMAAGFFN-GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT 472 + G + + + ++L AL S + IL+ P I L+N+ AS VG VP+++ + Sbjct: 476 QFPGFSYIYAGKANARIVLNALQSKTEVKILSAPKISVLNNQKASLQVGDQVPIVTQTSQ 535 Query: 473 TS---GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN-STLGPTFNT 528 + G V NT++ + G L+V P+VN+ V+L++ QEVS V +++ PT Sbjct: 536 GTVVSGAPVINTIQMRDTGVILEVIPRVNDNGNVILDVTQEVSEVAQTTSSGIDSPTIQR 595 Query: 529 RTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVF 588 R I + + + G TV LGGL+ + S VPL+ D+P++G LF+ +++ + L+V Sbjct: 596 RKIHSVIATRDGFTVALGGLIRENGSAGNSGVPLIKDVPVIGNLFKSNTSDIRRTELVVL 655 Query: 589 IRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKA 625 + P ++R+ +S++ + + A Sbjct: 656 LVPHVMRNQMETQSVADALVDGLEAASRLAERARLPA 692 >UniRef50_D0LLW3 General secretion pathway protein D n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLW3_HALO1 Length = 842 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 166/663 (25%), Positives = 293/663 (44%), Gaps = 62/663 (9%) Query: 26 EQYGANFN-NADIRQFVEIVGQHLGKTILIDPSVQG---TISVRSNDTFSQQEYYQFFLS 81 +F +++ + + + + G +++ + + Q+ + FL Sbjct: 83 GPVSVSFKPEVELKDLITWAMGFTCRNFVYGAGIGGRSSQVTIIAPKRMTPQQAWGVFLV 142 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 L+ +V+ N L +V SA P I P +LV +V E++PA +LA Sbjct: 143 ALETMNLTVVPHGN-VLTIVESAQAGKQPLPIYRRGAPAANAQLVRMVVRPEHLPAEELA 201 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE--Y 199 L + G V +N+LI+T TI+++ +I+ VD +++ + Sbjct: 202 RALDGL--KSQHGAVTPLASANMLIVTDYGHTISRMRTLIREVDQP-LAGERLYLIRVRN 258 Query: 200 ASAEDLAEILNQLIS-----------------------------ESHGKSQMPALLSAKI 230 A A ++A L +++ +S S++ A + +KI Sbjct: 259 ADATEMATKLQEILGVQEQGRQASSPPTSRTRRRRGDRDAEVQVDSGDASEVSAAVPSKI 318 Query: 231 VADKRTNSLIISGPEKARQRITSLLKSLDVE--ESEEGNTRVYYLKYAKATNLVEVLTGV 288 + D+RTNSLI+ + A QR+ SL++ LDV G VY L++ A + LT Sbjct: 319 IPDERTNSLILVSSQAAYQRVRSLIERLDVGIDGGGSGRIHVYPLEHGNAEEIANTLTSA 378 Query: 289 SEKLKDEKGNARK---------------PSSSGAMDNVAITADEQTNSLVITADQSVQEK 333 + + A + V +T D TN+LVI A Sbjct: 379 ISGISQQTTGAGARNNPRARNARAQTGDSGAPAFEGQVRVTHDAPTNALVIVASVKDFFA 438 Query: 334 LATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGV 393 L VI +LD R QV +EA+I+EVQ +GL+LG + + G + Q + Sbjct: 439 LRDVIEKLDTPRRQVFIEAMILEVQTDSGLDLGASFHGGQLSDDGTLLLGGLQTSDLQSI 498 Query: 394 ADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDN 453 + G +GVL ALA+++ ++L++P IVT +N Sbjct: 499 VPG-TLAASSGLLGGVLGPLLNTQELLGVSIPSFGVLFQALATSSNVNVLSSPHIVTTNN 557 Query: 454 KLASFNVGQDVPVLSG-----SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIE 508 + A +VGQ++P SG + T +V+R+ V LK+TP +N D V LEI+ Sbjct: 558 EEAEISVGQNIPYQSGLSGLPTAGTGVSFPVQSVQRQDVALTLKITPHINASDMVTLEID 617 Query: 509 QEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPL 568 QE+S + S + LGP+++ RT++ V+V+ +++V+GGL+ D SKVPLLGD+PL Sbjct: 618 QEISDIASPDFAGLGPSWSKRTVKTTVVVRDQQSIVIGGLMSDRMTYNESKVPLLGDLPL 677 Query: 569 VGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVG 628 +G F++T +++K NL++ + P +I+ + + K ++ + + + Sbjct: 678 LGYFFKFTERQKSKTNLLILLTPYVIKGQMDIEQIVQRKTRESQEFARTFSNLERTPFRP 737 Query: 629 SED 631 D Sbjct: 738 EID 740 >UniRef50_B7S1V0 General secretion pathway protein D n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1V0_9GAMM Length = 727 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 149/665 (22%), Positives = 268/665 (40%), Gaps = 91/665 (13%) Query: 20 AGHAENEQYGANFNNADIRQFVEIV-GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 + NF A + + + G L ++D +QG +++R+ + + Sbjct: 80 PVRFLGDDVSLNFEQAPLSEVTHAIMGDILELDYVVDHPIQGQVTLRTRTPIPRDQLLGV 139 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 S+L +I +G V SA +++ G T IVPL+ + A+ Sbjct: 140 LESLLKANNTIMIRGSDGRYLVTGSARGTKLSPSVSNPRDNIAG--YSTVIVPLQFISAK 197 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IH 196 ++A +L+ + D + + N+L+L G + ++ ++++ DV + + Sbjct: 198 NMAEILKPVADESAFVRI--DSSRNLLVLAGTRTQLDGWLDMVSTFDVDQLKGMSVGLFP 255 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK-ARQRITSLL 255 LE + ++ + L+ ++ + + ++V R NS++I P + + Sbjct: 256 LENSEVAEVVDALDAIMGTT--QDGSSMKDMIRVVPVDRLNSILIVTPRAHYLGTVEKWI 313 Query: 256 KSLDVEESEEG--NTRVYYLKYAKATNLV------------------------------- 282 + LD VY ++ A+ L Sbjct: 314 ERLDEAHYSALDRRLYVYPVQNTTASRLSDLINSIYSGGQSSGRSQSRGGYRDSSGVAPG 373 Query: 283 ---EVLTGVSEKLKDEKGNARKPSSSGAMDN-----------------------VAITAD 316 E L +G + SG V + AD Sbjct: 374 LSPETLGSSRGMGSSNRGGSSNRMGSGRSSGNTGSSVANVNMEGVTGSGDETAEVRVVAD 433 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA 376 ++ NSL+I A + + T + +LD+ QV++EA I+EV + L G++W N Sbjct: 434 DENNSLMIYATSMQYKVIKTALDQLDVVATQVIIEASIIEVSLTDELRYGLEWTFSNSLG 493 Query: 377 QQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN--GDWGVLLTAL 434 ADY +G ++S A S G + N G+ +L AL Sbjct: 494 -----------------ADYDGSGFLSSIAGAESPASIVPGFSYTVTNSIGNVSAVLNAL 536 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPV---LSGSQTTSGDNVFNTVERKTVGTKL 491 A + +I++TPS++ LDN A +VGQ VP+ +GS D V ++ + G KL Sbjct: 537 AEESLLNIISTPSVMVLDNHYAYIHVGQQVPIIDSQTGSLANDTDRVTQSITYRDTGVKL 596 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDD 551 V P VN G + +++ Q V+ V +T F R I++ V V++ E+VVLGGL+ + Sbjct: 597 DVRPSVNAGGLITMDVAQSVTDVGEIDAATGQRAFLERNIESRVAVRSNESVVLGGLIRE 656 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 S VP L +P+VG LF S + L+V I P + ++D RS+S+E ++ Sbjct: 657 NSGTASQGVPWLHSVPIVGSLFGTDSARSNRTELLVIITPRALYNEDELRSVSEEMRSKI 716 Query: 612 RQEQQ 616 R + Sbjct: 717 RNLEL 721 >UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKZ0_MARMM Length = 686 Score = 360 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 145/624 (23%), Positives = 260/624 (41%), Gaps = 54/624 (8%) Query: 18 PCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 P ++ NF + + V IVG LG+T+++ V G IS+ S + + Sbjct: 92 PNRADLDSRTLRLNFVDVPVADVVRTIVGDALGQTVMVADGVTGRISLTSAEPAPARAAL 151 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 ++L + G + R + PG+ SS G G R+VP+ + Sbjct: 152 AALETVLGESNLVLAERAEG-YLLTRLDMAR--PGLTGLSSELGYGG----RVVPVTHTT 204 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQI 194 + L+ + VV ++ VL+L G ++ D + Sbjct: 205 PSAIVSLIDPFLS--DRVEVVPHDALGVLVLAGPGPDVDGARRAAILFDRPFLTDRVFGM 262 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG-PEKARQRITS 253 L Y SAE ++ ++S + ++ + + +A R N L+++ ++ Sbjct: 263 FELRYVSAETAKSEVDTVLSGTG-----MSIDAIQTIAMPRLNMLLVTARDRSQFEQAQV 317 Query: 254 LLKSLDVEES-EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN------------AR 300 ++ LD + E R Y ++ A+ L +T + G Sbjct: 318 WIERLDRPSAGSERRLRYYVVRNTPASTLATQITAAFAGGQTGAGQLIEPRFQGDDAHGE 377 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 + + I DE N+L+I A ++ ++ R+D+ QVL+EA I EV+ Sbjct: 378 PSAPGEEQSRLTIIPDELNNALIIRATDQEYREILDLVQRMDVMPPQVLIEATIAEVRLE 437 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 +GL+ GV+W +N G+ + ++ N + G Sbjct: 438 DGLDFGVRWYFENAGSNETSSLQFSDSN-------------------TGSTAPVFPGFNY 478 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT---SGDN 477 F D L+AL S +L+ PSI+ +N+ A VG +VP+++ + T+ S Sbjct: 479 AFSGTDLTATLSALRSITDVTVLSAPSIMVQNNQTAHLQVGDEVPIVTQTATSVTESNAP 538 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN-STLGPTFNTRTIQNAVL 536 + ++VE + G L+VTP++N V+LE+ QEVSSV ++ PT + V Sbjct: 539 IVSSVELRETGVILQVTPRINASGMVVLEVNQEVSSVRPTTTSGIDSPTIQKLEFTSTVS 598 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 V++ T+ LGGL+ + + + S+ PLLGDIP VG LFR + + L++F+ P II Sbjct: 599 VRSSNTIALGGLIRETTSDNESRTPLLGDIPGVGNLFRNRAMTSQRSELVIFLTPRIIWT 658 Query: 597 DDVYRSLSKEKYTRYRQEQQQRID 620 DD S ++ + ++ Sbjct: 659 DDDVGSALTHVRRQFEALEARQPG 682 >UniRef50_B4U6K2 General secretion pathway protein D n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6K2_HYDS0 Length = 660 Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats. Identities = 148/659 (22%), Positives = 276/659 (41%), Gaps = 71/659 (10%) Query: 1 MKGLNKITCC----LLAALLMPCAGHAENEQ------YGANFNNADIRQFVEIVGQHLGK 50 MK L KI C +L ++ H + + NF N I + + + GK Sbjct: 1 MKILRKINCLNIFSVLWIFIVFGMAHGKGKTKYLNNMVVLNFQNQSIDDIAKFMSKLTGK 60 Query: 51 TILIDPSVQG---TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVK 107 TI+I ++G I+V S S ++ + FL+ L L GY+V+ N F K++ Sbjct: 61 TIVI--GIKGNLPKITVSSKKPVSVEDAWHLFLTSLALDGYTVVKYKN-FYKILPLKEAS 117 Query: 108 TSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLIL 167 + + + P + + + ++ L +R + GN Y PSN LI+ Sbjct: 118 SFSTSVTKKAFPSPS---IETYIYFAHTNSQILLNAVRPFLSQ--YGNATVYMPSNALII 172 Query: 168 TGRASTINKLIEVIKRVDVIG-TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALL 226 + +++K+ +++K +D+ ++ + +A + + L+ L + K +P ++ Sbjct: 173 SDIGVSVDKIQKLLKSIDIPNLAFSLKMYQTKDTNA--VVKALSPLANPVSQKFGIPMVV 230 Query: 227 SAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGN-TRVYYLKYAKATNLVEVL 285 S+ ++ +++ P+ + I ++ ++ S V L+ A + + L Sbjct: 231 SSVQKKHSKSGFVLVYAPKLMQASIKEIIHKINESASHFRRHYYVIPLQNASVGEMAKTL 290 Query: 286 TGVSEKLKDEKGNARKPSSSG---------------------------------AMDNVA 312 + ++P+ + D Sbjct: 291 ASLFGSASAISSTTKRPTPNLNTMQNQPQTIQSNVPPNQNINVISSNKPIGSIYLSDGTR 350 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 I D TNS+++ A +S E L +I +LD +R QVL+ A +VE L GV W Sbjct: 351 IGFDRATNSVILYATKSQYENLKNLIKKLDEKRIQVLIAASVVEANLTKQLTTGVNWQAL 410 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 N + QG+ G+TS++ D V L+ Sbjct: 411 GKNGGIGFNP-ASLQTIYQGLLSGNFVVGVTSSSSISANVGGNT-----IIFPDLAVFLS 464 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLK 492 L N I++ P ++TLDN+ A Q P ++G+Q T + K +G +L Sbjct: 465 LLEQGNGFKIISNPKVLTLDNEEAIIKEAQVYPYVTGTQYNINGFPILTYDYKDIGLELD 524 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG------PTFNTRTIQNAVLVKTGETVVLG 546 V P V++ + + L I + + +N+ + P R + + V+VK+G+TV+LG Sbjct: 525 VIPTVSKDN-IRLGINLNLQDITGFTNTNVAGQTVPIPITTDRVLNSEVVVKSGQTVILG 583 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GL+ + + + +S +P+L DIP++G LF+Y + E K L +FI P II+ D ++K Sbjct: 584 GLVSNNTIKNISGIPILQDIPVLGNLFKYQNRENKKSTLFIFITPYIIKSPDQLAKITK 642 >UniRef50_A7IH57 General secretion pathway protein D n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IH57_XANP2 Length = 767 Score = 358 bits (918), Expect = 5e-97, Method: Composition-based stats. Identities = 161/686 (23%), Positives = 262/686 (38%), Gaps = 101/686 (14%) Query: 21 GHAENEQYGANFNNADIRQFVEI-VGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 + Y NF+N + ++ +G LG +IDP VQGT+++ S + E Sbjct: 100 VSGGADGYDLNFDNTPVTSVAKVVLGDILGVGYVIDPRVQGTVTLASARPVPKTELLYVL 159 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 + L +++ G ++V +SRP G + +VPL V A Sbjct: 160 EAALKTNNVAMVREGAG-YRLVPLTEAAGGGNADVGTSRPEPGYGI--SVVPLRYVSAEA 216 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHL 197 L PLL G V N+LI+ G S I + D Q + + Sbjct: 217 LMPLLDSFATRA--GAVRADPGRNLLIVQGTGSERQSAINTVLSFDADWMRGQSVGVYPV 274 Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG-PEKARQRITSLLK 256 ++ E L L ++ + K A R N++++ + Q + + Sbjct: 275 RNSAPEPLISELESIMDAG---DSGLSHKMVKFQAINRLNAIMVVAKKPELLQTAGTWIG 331 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK-------------------- 296 LD ++ G RVY L+Y A + +VL + Sbjct: 332 RLDRSDTTVG-VRVYRLRYGDAKQMAKVLNELFVGGSSSGLDQAASQIAPGSGASVSSGG 390 Query: 297 -----------------GNARKPSSSGAMDNVAITADEQ--------------------- 318 G + +G I D + Sbjct: 391 GSDGNGSGSGLTVQQRLGQSPPKQDTGGTGGKTIAVDSEGAPVGGSGGGAGGGGALLSGI 450 Query: 319 -------TNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 NSL+I A Q + + +LD + QV +EA + EV + L GVQ+ Sbjct: 451 RITADAINNSLLIFASQENYRIIERTLMQLDQPQLQVAIEATVAEVTLNDTLAYGVQFYL 510 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLL 431 + N G + + + D N + N + +L Sbjct: 511 TSKDLGLGRNNGSVLNTLSSDITDQAINRVLPGFNLLVGRENQP------------RAIL 558 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNTVERKTVGT 489 AL + +L+ PS+V +DN+ A+ VG +VPV +GS T +S + V NT+E K G Sbjct: 559 DALHTVTDVKVLSNPSVVVVDNQKATLQVGDEVPVSTGSATVLSSSNTVVNTIEYKNTGI 618 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSS---------NSTLGPTFNTRTIQNAVLVKTG 540 L V P+VN V LEIEQE+S+V S ++ L PT + R +++ + V +G Sbjct: 619 ILHVVPRVNVNGQVRLEIEQEISNVTQSDPTTSGTSSNSTGLTPTVSQRKVKSVIAVASG 678 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 +TV+L GL+ + VP+L IP VG F +T+ + L++FIRP IIRD+ Sbjct: 679 QTVLLAGLISERHNGVRQGVPILDQIPGVGDAFAHTNGTVKRTELIIFIRPQIIRDNVDA 738 Query: 601 RSLSKEKYTRYRQEQQQRIDGKSKAL 626 ++++E + R G L Sbjct: 739 HTVAEELRAKLRGTVTTLPGGPQAPL 764 >UniRef50_D0X4T6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X4T6_VIBHA Length = 715 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 136/623 (21%), Positives = 257/623 (41%), Gaps = 53/623 (8%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQG---TISVRSNDT 69 A ++ + + F+ + GQ L ++ ++QG +++ + Sbjct: 120 AGQALSTNFSDEASLKLAADAMPLNDFLHYVFGQILQVDYILGDNLQGVTTPVTLNVQND 179 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMI--ADSSRPGVGDELVT 127 S + + +L G SV D ++ + + K+S + + G V Sbjct: 180 ISPRRLFDLTQELLVQRGISVQARDGLYVIMNLKQDGKSSAVLGYGSTPDSVPDGAIDVV 239 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 ++VPL+ + ++R++ V VLIL+G+ S + + IE++K +D Sbjct: 240 QVVPLKFTFSNSTMGVIRELTS----VRVSPDLRQGVLILSGKRSEVVRAIELLKILDAP 295 Query: 188 GTEKQQI--IHLEYASAEDLAEILNQLISESH-GKSQMPALLSAKIVADKRTNSLIISGP 244 + I + L Y + ED + +L+ +V + +L + Sbjct: 296 SNTSKHIGLVKLRYITTEDFIATVTELLQNEGIVADGGVNDKRLSMVQIPQLGALAVFAS 355 Query: 245 EKA-RQRITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 E + +R+ +D + + +Y KYA+A ++ + L+ + + Sbjct: 356 EDSFIKRVRYWAAQMDRPSQGADLRYFIYQPKYARAADIGDSLSKLIGGRSLSVQKSADK 415 Query: 303 SSS-----------GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 SS + D +++ DE+ N+L+ + + + L +IA+LD+ QV++E Sbjct: 416 DSSKIEVNSQSSNSVSNDKLSLVVDERANTLIFRSSSTEYQALLPLIAQLDVMPKQVILE 475 Query: 352 AIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM 411 I EV + GV+WA N G +++ Sbjct: 476 MTIAEVTMTDEFKFGVEWAFSN--------------------------GNFSASTKDAFG 509 Query: 412 FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 G + +GD + L A SNN +I++ PS++ D A+ NVG D+PV+ + Sbjct: 510 LDKVGGGFIKWMSGDDFINLQAFESNNNVNIMSKPSLLVRDGVEANINVGTDIPVVGQTT 569 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS-SVDSSSNSTLGPTFNTRT 530 T S + V +VE + G K+ VTP +N V + I QE S VD ++ P+ R+ Sbjct: 570 TDSNNGVTRSVEYRKTGVKVAVTPTINAQGIVSMVISQENSNQVDGGTSVEGNPSIFDRS 629 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 I V+ ++G+TV+LGGL+ + S VP LG +P+VG LF + + K L++ + Sbjct: 630 ITTEVVAESGQTVILGGLISENVTNNGSAVPFLGSLPVVGGLFGTKTDNKTKTELVIMVT 689 Query: 591 PTIIRDDDVYRSLSKEKYTRYRQ 613 P I+ + L Sbjct: 690 PRIVESSSQWDDLKARFAQGLEH 712 >UniRef50_B9L741 Putative GspD n=1 Tax=Nautilia profundicola AmH RepID=B9L741_NAUPA Length = 580 Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats. Identities = 127/580 (21%), Positives = 259/580 (44%), Gaps = 41/580 (7%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ F N +I F+++V + K IL+ ++G ++ S ++ E Y L+IL Sbjct: 16 AQKIDLTFKNLEINDFIKMVAKITNKNILLTNDLRGKVNFISVKPVNENEIYDILLNILR 75 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 GY++I ++G+LKV++SA+ I S ++ T I+ L N+ A+ + Sbjct: 76 SKGYTLIK-EHGYLKVIKSADAIKEAPPIGKSDIY----QIRTDIIKLHNISAKTAYTQI 130 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 + G ++ + N+LI+T + + +++ ++D + +L+ Sbjct: 131 NYL--KSKYGKIILNKDKNLLIITDYPKNLKIMKKLLSKIDTLDKPDIIFFNLQNTQLSK 188 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD-VEES 263 + + ++ + + KI+ + +N +I+ GP K Q+I +K LD + Sbjct: 189 IYPKITEISNTLFN----DKIYKYKIIKNDNSNGIILVGPNKVIQKILQHIKQLDTKPKQ 244 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV 323 + T + LK + TN+ +++ + + +IT D++TNSL+ Sbjct: 245 LDQVTEIITLKNSDVTNMAKIIQKIVSLKYKKNI-------------PSITEDKETNSLI 291 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG 383 I A + + T+I LDI + QV V+A I+E+ + +G + Sbjct: 292 IIATLEQMDTIKTIIKALDIPKMQVYVKARILEISNLKASQIGNKLGLYAGSGT------ 345 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 G Y + + A+D+ S + G + L + L Sbjct: 346 --------GSGLYTLSANMGGPAIAFDVTSLGLSIPTIRQGLALGATIDLLETFGAAKKL 397 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAV 503 + PSI+ ++N ++ VG+ + V +G T++ +V + R+ +G L++ P+++ + V Sbjct: 398 SEPSILCINNTPSTIYVGKTISVKTGQTTSTSTSVSYS--RQDIGLTLEIKPRIDSDNKV 455 Query: 504 LLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 L ++ V + S PT + R I+ +V G+++++GGL+ + + KVP Sbjct: 456 SLNVKAVVEDILPGSPDLTLPTTSKRDIKTTTIVSNGQSIIIGGLVRNNKDITIKKVPFF 515 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 GDIP++G LFR+ K L++ + P I++ L Sbjct: 516 GDIPIIGALFRHKEVNEDKTTLVIVLTPYIVKQSTDLDKL 555 >UniRef50_A6DDM8 Type II and III secretion system protein:NolW-like protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDM8_9PROT Length = 579 Score = 354 bits (908), Expect = 8e-96, Method: Composition-based stats. Identities = 155/601 (25%), Positives = 277/601 (46%), Gaps = 50/601 (8%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 + I L +++ N + NF N DI F+++V + K ILI + G ++ Sbjct: 1 MKLIKILFLTIIIL-------NAKVNLNFQNLDINDFIKMVAKITNKNILITQPISGKVN 53 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 S ++E Y L+IL GY++I DNGFLKV+R + + D Sbjct: 54 FVSVKPIDEKEVYSILLNILRSRGYTIIK-DNGFLKVIRESQAIKEGPQLNPHF-----D 107 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 ++ T I+ L N+P R+ + + + G +V N+LI+T S + + EV+KR Sbjct: 108 QIQTNIIKLNNIPVRNAFNAVAYL--KSNYGRIVINSDKNMLIVTDYPSNLKVIKEVLKR 165 Query: 184 VDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 +D T+ + I L S + + LNQ+ + + S KI+ + +NS+I+ G Sbjct: 166 IDSKETKSLRNITLNNTSIDKVYPKLNQIATTLFNT----KIYSYKIIPNDVSNSIILVG 221 Query: 244 PEKARQRITSLLKSLD-VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 + ++ ++KSLD + T+V LK + ATN+ ++L + + + Sbjct: 222 QKNVVYKLARVVKSLDVKPKQLNQITKVITLKNSDATNIAKILQNIVKTKYKKN------ 275 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 +IT D++TNS++I A E + T+I LD + QV V+A I+E+ + Sbjct: 276 -------PPSITLDKETNSIIILATPEQIETIKTIINALDTPKEQVYVKARILEISNTKA 328 Query: 363 LNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 +G + L +A + G+T + Sbjct: 329 AQIGNRLGLYAGSGTTSGLYTLSANLGGPAIAFDVASLGLTIPTIKQGIA---------- 378 Query: 423 FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTV 482 G L L + L+ PSI+ ++N ++ VG+ V VL+G T++ + T Sbjct: 379 ----LGATLDLLETYGAAKKLSEPSILCINNTPSTIYVGKTVSVLTGKTTSTTTSESYT- 433 Query: 483 ERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGET 542 R+ +G LKV P+++ + V L ++ + + S + P + RTI +V+ G++ Sbjct: 434 -RQDIGLTLKVKPRIDSDNKVALNVDAVIEDLLPGSPVNM-PITSKRTINTTTIVRNGQS 491 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRS 602 +++GGL+ D ++KVPLLGDIP++G LFR+ + K L++ + P I++ D Sbjct: 492 IIIGGLVRDNKDITLNKVPLLGDIPILGALFRHKQINKDKTTLVIVLTPYIVKKSDDLEK 551 Query: 603 L 603 L Sbjct: 552 L 552 >UniRef50_B0T7N8 General secretion pathway protein D n=1 Tax=Caulobacter sp. K31 RepID=B0T7N8_CAUSK Length = 681 Score = 352 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 136/643 (21%), Positives = 262/643 (40%), Gaps = 80/643 (12%) Query: 24 ENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 + NF +R+F + ++G L + + GT+++ + ++ + Sbjct: 76 SSGPVALNFPGVGVREFAQAVLGDILHLPYAVSAAASGTVTLVTPRPIARADVLPAVEEA 135 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L G ++++ D ++ + + + + V L + L Sbjct: 136 LRNVGLALVSRDG-VQTIMTLGDARAQGLTVGADQP-----GFGSETVALRFAGPQALKT 189 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHLEYA 200 LL ++ +N L+L+G A + +++++ DV + + ++ Sbjct: 190 LLDPIVP---GVITSADPATNTLVLSGSAGQRRAVRDLVQQFDVDWLKGMSFGLYVPKHT 246 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLLKSLD 259 A +A L++LI+ P ++VA ++ N ++ IS + + + ++ LD Sbjct: 247 DARLIAPELDKLINAPG----SPMAGRVRLVAMEKLNGIVAISSQPQYLEDVNRWIEVLD 302 Query: 260 VE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS--------------- 303 E +S E VY ++ +A++L VL + A + Sbjct: 303 REGQSTERRLFVYRVQNGRASDLSRVLASAFGRGGGSSAAAPGGNRPALDRLGVEAAASP 362 Query: 304 ----------------------SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 + G D + T+DE N++V A + + +L Sbjct: 363 LLAPSNGQTLPGQSPAPAAPDMAGGPADGLTFTSDETNNAVVAYATPREYALIEDALRKL 422 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 D+ QV++EA++ EV + L G QW ++ + + G Sbjct: 423 DVVPLQVVIEAVVTEVSLNDALRYGSQWFIRSGDDRAILSRGKT---------------- 466 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 D S + G L AL+S ++L+ P+++ L+N+ AS VG Sbjct: 467 -------ADPASTFPGFTYLLNRSSIAATLDALSSVTHVEVLSAPNLMVLNNQTASLEVG 519 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS-SNS 520 VPV +GS S +V +++E + G LK+TP+VN G VLL+I QEVS V + S++ Sbjct: 520 DQVPVSTGSALNSS-SVISSIEYRDTGVLLKITPRVNSGGLVLLDIAQEVSDVSPTLSST 578 Query: 521 TLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTER 580 PT + R I ++ V+ G+TV LGGL+ D +K + VP L +P++G L R Sbjct: 579 IDSPTISVRKIATSIAVQDGQTVALGGLIRDNNKRLRNGVPFLSAVPVLGALAGSRDNSR 638 Query: 581 AKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKS 623 + L+V + P ++R+ ++++ E + R Q Sbjct: 639 ERTELLVLLTPRVLRNSGDIQAVTDELREKIRSISPQPARFLP 681 >UniRef50_A7BV51 Bacterial type II and III secretion system protein n=1 Tax=Beggiatoa sp. PS RepID=A7BV51_9GAMM Length = 442 Score = 352 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 175/422 (41%), Positives = 243/422 (57%), Gaps = 18/422 (4%) Query: 229 KIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV 288 K V RT+ +G + R R+ +++ LD G+T+V YL+YA+A +LV VL G+ Sbjct: 22 KPVVIVRTSFKKQNGDKITRLRLRTMITHLDTPVKSIGDTQVIYLRYAEAKDLVNVLKGI 81 Query: 289 SEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQV 348 S+ L + + K S N I ADE TNSLVITA VQ+ L TVI +LDIRRAQV Sbjct: 82 SDSLVENQKKKGKSPSPEIKTN--IQADESTNSLVITATPKVQQNLQTVIRQLDIRRAQV 139 Query: 349 LVEAIIVEVQDGNGLNLGVQW------ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGI 402 LVEA+I E+ LGVQW G F N+G I + A N Sbjct: 140 LVEAVIAEISTDTARELGVQWLLYGNKGTAPFGLSNFDNSGTRIADLASAGYLANNNSST 199 Query: 403 TSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 + N F F ++GVLL ALAS+ ++L+TPS++TLDN+ A VGQ Sbjct: 200 SLPNIGAGAFLGLGRFNNSFL--NFGVLLRALASDTNTNVLSTPSLLTLDNQEAEIVVGQ 257 Query: 463 DVPVLSGSQTTSGDN-------VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD 515 +VP ++G T +G + F T++R+ +G KL+V PQ+NEG+AV LEIEQEVSS+ Sbjct: 258 NVPFVTGQYTNTGTSGGGGVTNPFQTIQREDIGIKLRVKPQINEGNAVKLEIEQEVSSLS 317 Query: 516 SSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRY 575 SS +T N RTI+ V+V+ G VVLGGL+D+ ++ KVP LGD+P++G LFR Sbjct: 318 RSSQATTDIVTNKRTIKTTVIVEDGNMVVLGGLIDEDLQQTAQKVPGLGDLPIIGHLFRS 377 Query: 576 TSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVL 635 ST++ KRNLMVF+ P IIRD +S KY+ R +Q Q+ + L+ E++PVL Sbjct: 378 RSTQKIKRNLMVFLHPVIIRDAASENIISSGKYSYLRTQQLQQ-RAQGLPLMPDEEIPVL 436 Query: 636 DE 637 + Sbjct: 437 PD 438 >UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVJ8_SYNAS Length = 601 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 140/508 (27%), Positives = 236/508 (46%), Gaps = 29/508 (5%) Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 + + + + + + + +++ V V+ + R K I + + Sbjct: 109 VTVFSPKQISSDEAYRVFQSVLEIHGYTTV---PSGAVIKILPRKDAREKDIPTFLQDEE 165 Query: 187 IGTEKQ---QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 G E Q +I+ L++ + EDL ++++ L++ P + L+I+ Sbjct: 166 GGREDQLITRIVKLKHGNPEDLKKVIDPLVTRDSIVHAYPP-----------SGMLVITD 214 Query: 244 PEKARQRITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 E QR+ ++ +LD E E VY L+ A A +L +VL + E + Sbjct: 215 VESNVQRLLKIITALDSELEKNAIVMHVYPLQNASAEDLAKVLINL---QPKETAPGSEK 271 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 NV I +D+ TNSL+ITA L +I +LD R V +EA+I+EV Sbjct: 272 GQPALSRNVQIQSDKATNSLIITASAEDYALLQGLIQKLDSSRPMVYIEALILEVNIVKD 331 Query: 363 LNLGVQW------ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 NLG +W + G+ F + GL + S+ + + Sbjct: 332 FNLGTEWRAMHDAGSGGTGSLLFGSGGLGPPAGTYNILPDVTTPATYSSGFTFGILGTGI 391 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 + G D G ++ A+ S+ IL+ P ++T+DN+ A +VG++VP + +TT+ + Sbjct: 392 TLG-GITFQDIGAMIQAIKSDTDIHILSKPQLLTMDNEEAQIHVGKNVPYATRKETTTTN 450 Query: 477 NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVL 536 +++ E + VG LK+TP +N V ++I QEVS V + T PT N R + V Sbjct: 451 LDYSSYEYRDVGVSLKITPHINSEGFVRMKINQEVSQVTED-SPTGLPTTNKRAVNTTVT 509 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 +K ETVV+GG++ D ++ KVPLLGDIP++G LF+ S+ R K NL VFI P +IR Sbjct: 510 IKDSETVVIGGMIGDSTQLGTYKVPLLGDIPVLGWLFKSRSSNREKTNLYVFITPRVIRQ 569 Query: 597 DDVYRSLSKEKYTRYRQEQQQRIDGKSK 624 +SKEK +E++ + K Sbjct: 570 HTDASRISKEKSDHLEREKKNLSNPGQK 597 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 14/313 (4%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 P + + +F+N +I+ F++ +G+ G+ LID VQG+++V S S E Y+ Sbjct: 65 PPVNNMGSPGVTIDFDNVEIQTFIKAIGEMTGRNFLIDKQVQGSVTVFSPKQISSDEAYR 124 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP-GVGDELVTRIVPLENVP 136 F S+L+++GY+ + +K++ + + G D+L+TRIV L++ Sbjct: 125 VFQSVLEIHGYTTVPSG-AVIKILPRKDAREKDIPTFLQDEEGGREDQLITRIVKLKHGN 183 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD---VIGTEKQQ 193 DL ++ ++ S+ V Y PS +L++T S + +L+++I +D Sbjct: 184 PEDLKKVIDPLVTRDSI--VHAYPPSGMLVITDVESNVQRLLKIITALDSELEKNAIVMH 241 Query: 194 IIHLEYASAEDLAEILNQL----ISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 + L+ ASAEDLA++L L + K Q + +I +DK TNSLII+ + Sbjct: 242 VYPLQNASAEDLAKVLINLQPKETAPGSEKGQPALSRNVQIQSDKATNSLIITASAEDYA 301 Query: 250 RITSLLKSLD-VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM 308 + L++ LD + + K NL + + G+ S Sbjct: 302 LLQGLIQKLDSSRPMVYIEALILEVNIVKDFNLGTEWRAMHDAGSGGTGSLLFGSGGLGP 361 Query: 309 DNVA--ITADEQT 319 I D T Sbjct: 362 PAGTYNILPDVTT 374 >UniRef50_B0BAC9 Type III secretion structural protein (Outer membrane ring) n=16 Tax=Chlamydiaceae RepID=B0BAC9_CHLTB Length = 921 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 138/637 (21%), Positives = 255/637 (40%), Gaps = 60/637 (9%) Query: 28 YGANFNNADIRQFVEIVGQHLGKTILIDP-SVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 Y NF + I + ++ V + G + D +Q +++ S+D S + L +L ++ Sbjct: 265 YTVNFEDISILELLQFVSKISGTNFVFDSNDLQFNVTIVSHDPTSVDDLATILLQVLKMH 324 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 V+ N L K S + S++ +VTR+ L +V +++ Sbjct: 325 DLKVVEQGNNVLIYRNPKLSKLSTVVTDGSAKDTCEAVVVTRVFRLYSVSPSAAVGIIQP 384 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT-EKQQIIHLEYASAEDL 205 ++ ++ + E + +I++ A I K+ E+++ +D GT +++A+ L Sbjct: 385 LLSHDAI--ISASESTRHIIVSDIAGNIEKVRELLQALDSPGTAIDMSEYDVQFANPAAL 442 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE- 264 ++ + +I TN + + + + LL+SLD+ E Sbjct: 443 VSYCQDVLGAMAEEEA------FQIFIQPGTNKIFVISSPRLTAKTIQLLESLDIPEMAH 496 Query: 265 ---------------------EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS 303 +Y LKY + + + + L Sbjct: 497 TLDDVTSPAAALGSSGAANPKSLRFFMYKLKYQNGAAIAQAIQDIGYNLYVTTAMDEDFI 556 Query: 304 SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGL 363 ++ +I NS+V+ +Q+ +K+ +++ LD+ QV +E +I+E Sbjct: 557 NTLN----SIQWLPVNNSIVVIGNQANVDKVVSLLNGLDLPPKQVYIEVLILETSLEKSW 612 Query: 364 NLGVQWANKNV-------GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPA-----WDM 411 + GVQWA + +NTGL Q + G I+ P DM Sbjct: 613 DFGVQWAALGDEQGKVAYASGLLSNTGLTDPLRNQSLPVAPNPGNISLPTPGQLAGISDM 672 Query: 412 FSAYNGMAAGFFNG----------DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 + G G LL+AL + ++ P I+ D + ASF VG Sbjct: 673 MYGSSAFGLGIIGNVLSHNGKSYLTLGGLLSALDQDGDTTVVLNPRIMAQDTQQASFFVG 732 Query: 462 QDVPVLSGSQT-TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS 520 Q +P + S +V +E + +G L VT + + V L+IEQ +S + S+ Sbjct: 733 QTIPFQTTSTVIQETGSVTQNIEYEDIGVNLVVTSTIAPNNVVTLQIEQTISELH-SAQG 791 Query: 521 TLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTER 580 L P + + V G +V+ G + D + VS VPLL +PL+ LF + +R Sbjct: 792 VLTPVTDKTFAATRLQVPDGCFLVMSGHIRDKLTKIVSGVPLLSSLPLIKGLFSRSIDQR 851 Query: 581 AKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 KRN+M+FI+P +I + +LS + RY E ++ Sbjct: 852 QKRNIMIFIKPKVISSFEEGTALSNTEGYRYNWESER 888 >UniRef50_C5SIE2 Type II and III secretion system protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIE2_9CAUL Length = 626 Score = 344 bits (883), Expect = 5e-93, Method: Composition-based stats. Identities = 145/650 (22%), Positives = 266/650 (40%), Gaps = 64/650 (9%) Query: 1 MKGLNKITCCLLAALLMPCAGHAEN------EQYGANFNNADIRQFVE-IVGQHLGKTIL 53 MK C + + ++ A+N + NF +ADI Q E I+G LG + Sbjct: 6 MKATGLAVCLTMTSGMIVSPVMAQNTAQPRPAAFSYNFKDADIAQVAEEILGNGLGVSYR 65 Query: 54 IDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMI 113 +DP V G ++ R + ++ + F L+ Y +++ VVR + I Sbjct: 66 VDPGVSGKMNFRIDQRLTKPQLLAAFEGALNAYDMAIVREGETL--VVRPIANASVGAAI 123 Query: 114 ADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAST 173 D S R VP++ A ++A +L + + + + ++++L G A Sbjct: 124 NDGSSRLSRVGYQVRAVPIQYAAASEVAKVLESL--SREKLVLFSSDKLSLILLGGTADE 181 Query: 174 INKLIEVIKRVDVIGTEKQQI--IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIV 231 I + I+ D + +I L ASA +A L +++ S S A + Sbjct: 182 IESAMSSIRLFDQSTLSEARIRFFSLRNASATTVAGDLEKMLKASGTGSVTIAPMK---- 237 Query: 232 ADKRTNSLIISGPEKARQRITSLLKSLDVEES-EEGNTRVYYLKYAKATNLVEVLTGVSE 290 + S ++ ++ + LDV + + + VY + A L L + Sbjct: 238 --RLNGVFAFSRSKEVLDELSGWVTRLDVPSTDQALSFLVYRPRGVSAEALARTLNQLLG 295 Query: 291 KLKDEKGNARKPSSSGAM-----------------DNVAITADEQTNSLVITADQSVQEK 333 + A N+ I AD++TN+++++A ++ + + Sbjct: 296 LSSVASRETSTSRETPAGESATTATASEATNTNTDSNIRIVADKETNTVIVSAPEAERVR 355 Query: 334 LATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGV 393 + +V+ +D AQV +EA IVEV N + GV W N T Sbjct: 356 IQSVLNEVDREPAQVTIEASIVEVTLNNEFSFGVDWQTINGALSLSNYT----------- 404 Query: 394 ADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDN 453 + + G + + D L AL+S +K I++ P + +N Sbjct: 405 ------------TDSTSLAPQAPGFSVNYLRSDIKAALNALSSKSKVRIVSAPKMTAREN 452 Query: 454 KLASFNVGQDVPVL---SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE 510 AS +G VP++ S S + +T++ + G LKVTP+V + V +++ QE Sbjct: 453 ATASLQIGDQVPIVKQNSQSTNGGNAPIVSTIDYRDTGVTLKVTPRVLNDNRVAMDVTQE 512 Query: 511 VSSVDSS-SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLV 569 VSSV + ++ PT R +++++++ G V LGGL+ + PLL DIP + Sbjct: 513 VSSVARTQTSGIDSPTIKQRKLESSLIIPEGTVVALGGLISSSESDSEGGAPLLKDIPGL 572 Query: 570 GQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRI 619 G LF+ + + + L+V I+ TI+RD + ++ R +R+ Sbjct: 573 GNLFKQRARNKDRTELIVLIQVTILRDPAAFNRQWEDFGADIRDLAGRRL 622 >UniRef50_Q1YMS0 Putative general secretion pathway (GSP) protein D n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMS0_MOBAS Length = 700 Score = 344 bits (883), Expect = 6e-93, Method: Composition-based stats. Identities = 137/644 (21%), Positives = 259/644 (40%), Gaps = 69/644 (10%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFS 71 A L P + + NF A I + VE I+G+ LG +DP V G +++ + + Sbjct: 78 APPLPPGVSASSVGEVNLNFQGAAIPEVVEAILGEALGIGYTLDPDVTGEVTLSTARPVA 137 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP 131 + + S+L G +++ ++ A+ +P ++ ++P Sbjct: 138 RDDLLAILESVLSGNGLALVKAGE-LYRITTDASTAATPIERGQATAGHGLS-----VIP 191 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 L+ V A+ L L+ G+V + N+LI+ G + D + Sbjct: 192 LKYVSAQTLTRLIDGFAIR--PGSVRVEKTRNLLIVAGSGEARRTAVGTALSFDTDWMQD 249 Query: 192 QQI--IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR- 248 Q + + L E + L ++ G+S + +A R ++++ + Sbjct: 250 QSVAILPLRATKPETIIPELTRVFGSRSGESSEDV---IQFMAMPRLKAVLVVSQSRGLV 306 Query: 249 QRITSLLKSLDVEESE-EGNTRVYYLKYAKATNLVEVL---------------------- 285 +R + + LD E + N VY +KY A L E+L Sbjct: 307 ERAQTWVSRLDKENPDLNSNVHVYRVKYRDAQKLSELLGRLFSSSAADPAAATEEATPQR 366 Query: 286 ----TGVSEKLKDEKGNARKPSSSGAMDNV--------AITADEQTNSLVITADQSVQEK 333 + + E S I D NSLVI D++V+ K Sbjct: 367 DADPSALVEAAFSAPLAGSATSLFLGASGGMLDGATSLRIEPDLSNNSLVIYGDRAVRGK 426 Query: 334 LATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGV 393 + +A +D+ + QV V + EV+ + L GVQ+ K+ G+ Sbjct: 427 VLQALAHIDVPQMQVAVNVTMAEVRLNDQLRYGVQYFIKS---------------GDIGL 471 Query: 394 ADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDN 453 K + G+ ++L AL + +L++PS+V ++N Sbjct: 472 GRDKGSVGLFRTIADGIAREVPGFNFVVGSESSPDIVLNALDAVTDVRVLSSPSLVVMEN 531 Query: 454 KLASFNVGQDVPVLSGSQTT---SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE 510 ++A F VG +P+++ + + + + N VE + G + V P++ E V + IEQE Sbjct: 532 EVAKFRVGDQIPIVTRTVNSVEDANAPISNEVEYRDTGIIMNVRPRIAENGVVTMVIEQE 591 Query: 511 VSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 +SSV ++ +L P + R++ + + V G+TV+LGGL+ + S +P L + +VG Sbjct: 592 ISSVT-ANAGSLTPVISNRSVASTISVVDGQTVLLGGLISEQSDVGRDGIPGLNRLKVVG 650 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQE 614 LF S + L++ IRP++IRD +++++ + Sbjct: 651 NLFGSKSRADVRTELLILIRPSVIRDGRDAQNVAESLRAQMWNM 694 >UniRef50_A4SKW4 S-protein secretion component D n=2 Tax=Gammaproteobacteria RepID=A4SKW4_AERS4 Length = 719 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 125/642 (19%), Positives = 247/642 (38%), Gaps = 89/642 (13%) Query: 26 EQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGT---ISVRSNDTFSQQEYYQFFLS 81 E + + + F+ +G+ L ++D ++Q +++R + S + Sbjct: 90 EPLSLSTDQMPLNNFINLALGEVLDLNYIVDQALQAKTDPVTLRVSKPVSARRLLGLIEE 149 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 +L + G ++ D + T P +++ + +P + V I+P+ +P Sbjct: 150 VLQVNGVALALEDGVIKVIPAEKTRNTVPMLMSGAIQPALRYGKVVEIIPVYYLPLGQAI 209 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE--Y 199 + +M+ S G V+ N +++ + I+++ +++ VDV + L+ Y Sbjct: 210 TIAERMV-RDSDGTVLMQNNLNAIMVVAKKEEIDRIHQLLAEVDVPNRVASHLTVLQPSY 268 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRITSLLKSL 258 S E+L L + + + M ++ ++ N+L+++ +A K L Sbjct: 269 LSLEELTTDLVKALDAAGVPVTMGKGMNGVVLVPMSNNTLLVTASTRAWLDYTRDWAKRL 328 Query: 259 DVEESEEGN--TRVYYLKYAKATNLVEVLTGVSEKLKDEKGN------------------ 298 D G+ Y+LK K + V++ + + Sbjct: 329 DKPRPTGGSDGVYAYFLKNTKVADTWPVVSSIFGNGETNTQQKEPGVDLLAEAEKAREAQ 388 Query: 299 ---------------------------ARKPSSSGAMDNVAITADEQTNSLVITADQSVQ 331 + S D + D + N+++ + Sbjct: 389 NSTGTARASDRELSSEPGNSGRAIPKSNNVQTMSVMTDQYRVVVDAKRNAIIFSGRYGDY 448 Query: 332 EKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQ 391 ++L ++ +D R QVL++A+I EV+ N +LG +W T+ Sbjct: 449 QRLIELLQFVDQRPRQVLLQAVIAEVKLTNDSSLGFEWNVNKGDITGGTSG--------- 499 Query: 392 GVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTL 451 + + GD A S +L++P +V L Sbjct: 500 -------------------LIQQTGNLNLAGVFGDVTAKFAAALSEGNAKVLSSPRLVVL 540 Query: 452 DNKLASFNVGQDVPVLSGS----QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 D + AS +G + V +G + + V + + G L++TP +N+ + + I Sbjct: 541 DQETASIKIGDQIVVKTGEISNGSSGNDPQVTTSYKYIDTGLSLEITPSINDDGLIEMVI 600 Query: 508 EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 QE+SSV S+ P N R +Q+ +L +G+TV LGGLL + KVPLLGDIP Sbjct: 601 SQEISSV--SAGGGDTPPINRRAVQSKLLADSGKTVYLGGLLSQSNTNNEEKVPLLGDIP 658 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 L+G LF+Y + + K L++ I P +I + + + T Sbjct: 659 LLGNLFKYQTKKIEKTELVLLITPYVITSKEEAEFYTDQFRT 700 >UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L240_HALNC Length = 729 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 107/503 (21%), Positives = 210/503 (41%), Gaps = 35/503 (6%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT- 189 P+E+V R + R + + G + Y+ N L++ + + + + G Sbjct: 225 PVESVDVRPMGSGSRITLKTRNAGEHMAYQTDNRLVVEVKPVPKAEGAQNVGEKKYTGER 284 Query: 190 -----EKQQIIHL----------EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADK 234 + QI L ++D+ ++ + + +L+ K ++ + Sbjct: 285 LTLKFQDIQIRPLLQLIADFTGNNIVVSDDVKGSISLRLENVPWDQALDLILTTKGLSMR 344 Query: 235 RTNSLIISGPEKAR--QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE-K 291 + +++ P + + ++ +T + + YAKA ++ ++L S+ Sbjct: 345 KNGNVMYVAPTADIVARDKAEIEARQQSQQLAPLSTDIIQINYAKADDIYKLLESASKTG 404 Query: 292 LKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 G + D ++T D ++NSL++T S +++ +I +LD QVL+E Sbjct: 405 KTSADGKGGDTAQRFISDRGSVTVDPRSNSLIVTDTASALDRIRDLIHKLDKPVKQVLIE 464 Query: 352 AIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN----- 406 IV D LGV+W + + + GL G ++ Sbjct: 465 TRIVIATDNFARQLGVRWGVQAGFNRGNSTFGLGSTAPLVASGTSLPTAGASTGTVGTAP 524 Query: 407 -------PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFN 459 P + G+A N + L+AL S +I+++P ++T + A + Sbjct: 525 TDWMVNTPISGTPAGSLGLAILGSNVLLDLELSALQSEGTGEIVSSPKVITTNGHTALIS 584 Query: 460 VGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS- 518 G ++P ++ T+G NTV K +VTPQ+ + ++++I+ + D ++ Sbjct: 585 QGTEIPYIATQ--TAGGVASNTVSFKKAVLSTEVTPQITPNNNIIMDIDVKKDEPDYTNL 642 Query: 519 -NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 T P NTR ++ V VK GETVVLGG+ + ++KVP GD+P +G LF+ Sbjct: 643 LPGTTNPPINTREVKTKVEVKNGETVVLGGIYQFENNNSINKVPFFGDLPGIGNLFKNKE 702 Query: 578 TERAKRNLMVFIRPTIIRDDDVY 600 + + L++F+ P II D Sbjct: 703 VKNQRLELLIFVTPKIINSDQSL 725 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 21/191 (10%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 E+ F + IR ++++ G I++ V+G+IS+R + + Sbjct: 275 VGEKKYTGERLTLKFQDIQIRPLLQLIADFTGNNIVVSDDVKGSISLRLEN-VPWDQALD 333 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPA 137 IL G S+ N + V I + L T I+ + A Sbjct: 334 L---ILTTKGLSMRKNGNVMYVAPTADIVARDKAEIEARQQSQQLAPLSTDIIQINYAKA 390 Query: 138 RDLAPLLRQMMDAG-----------------SVGNVVHYEPSNVLILTGRASTINKLIEV 180 D+ LL G G+V SN LI+T AS ++++ ++ Sbjct: 391 DDIYKLLESASKTGKTSADGKGGDTAQRFISDRGSVTVDPRSNSLIVTDTASALDRIRDL 450 Query: 181 IKRVDVIGTEK 191 I ++D + Sbjct: 451 IHKLDKPVKQV 461 >UniRef50_C1DRT4 General secretion pathway protein D n=2 Tax=Gammaproteobacteria RepID=C1DRT4_AZOVD Length = 752 Score = 342 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 143/680 (21%), Positives = 262/680 (38%), Gaps = 81/680 (11%) Query: 24 ENEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQGT---ISVRSNDTFSQQEYYQFF 79 E N NN + F+ E+ G LG + I P +QG IS+R ++ + + + Sbjct: 100 TGEPITLNLNNFPLPAFINEVFGNRLGLSFGISPELQGKTDLISLRLSEPQTPADLFATA 159 Query: 80 LSILDLYGYSVITLDNG-FLKVVRSANVKTSPGMIADSSRP--GVGDELVTRIVPLENVP 136 +L YG +V + F + ++A + P +++ + P + V + +P+ V Sbjct: 160 RFVLSEYGVAVTEREGVLFFQSAQNAPNDSLPLLVSGGALPEVPMSHRPVFQQIPMRVVR 219 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 + + L+ M AGS V SN ++L G I + + I+ D + + Sbjct: 220 SDSMVAWLKDMF-AGSSLKVSSDPLSNAVMLRGPIDLIRQASQAIELFDRPALKGSHSLA 278 Query: 197 LE--YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS--GPEKARQRIT 252 + YASA++L L +++ L +V + +I Sbjct: 279 ISPVYASADELGTALVKVLQAEGYDVSENPPLGGVVVLKLKELQRLIVFAADPAILATAR 338 Query: 253 SLLKSLDVEESE--EGNTRVYYLKYAKATNLVEVLTGV---------------------- 288 ++ LD + E E +Y ++ +A + +L + Sbjct: 339 QWVELLDRQSQEQVENGLFLYQVRNTQAAGIASMLGALGYSATIPDTGLNTSNTVTPTGA 398 Query: 289 --------------SEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKL 334 + S +G + ++ D N+++ KL Sbjct: 399 STGESLATSGPIRSVTGTGANARASAPTSIAGNPEQGSVVVDANRNAIIYKGSGQEWLKL 458 Query: 335 ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVA 394 ++ LD V+++ ++ EV + LGV W N Sbjct: 459 RPLLEELDRPVPSVIIDVLLAEVNLNDREGLGVDWQNITGSLGSK--------------- 503 Query: 395 DYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNK 454 A + S+ ++A G L A NN+ I ++P ++ + Sbjct: 504 -------QLIFGTANGIGSSGLNISALNSAGQTKATLNAFYDNNQAVIRSSPKLMVRSGE 556 Query: 455 LASFNVGQDVPVLSGSQTTSGDN---VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 A+ VG ++PV++G+ ++ + + TV+ + G L + P V V L+I QE+ Sbjct: 557 EATIEVGNEIPVVTGTTQSTDTDNAPITQTVQYRKTGVLLNIKPTVQASGVVDLKISQEL 616 Query: 512 S-SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 S S D+ + TL P N R ++ A+ ++ G +V+L GL+ + + VPLLGD+P +G Sbjct: 617 SESTDTGTGDTLTPIINNRRVETALTLRDGGSVMLAGLISSSKGKGDNGVPLLGDLPWIG 676 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSE 630 LF+ S + L+V I P ++RD D + LS+ EQ + S G Sbjct: 677 NLFKSQSNSETRTELIVMIIPYVVRDFDEAQDLSRTYR-----EQLSLNNSDSLERRGDH 731 Query: 631 DLPVLDENTFNSHAPAPSSR 650 LP PAP+ R Sbjct: 732 RLPPAYAPHATETPPAPAHR 751 >UniRef50_B9XM19 Type II and III secretion system protein n=1 Tax=bacterium Ellin514 RepID=B9XM19_9BACT Length = 785 Score = 342 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 137/605 (22%), Positives = 256/605 (42%), Gaps = 21/605 (3%) Query: 29 GANFNNADIRQFVEIVGQHLGKTILIDPSVQGT-ISVRSNDTFSQQEYYQFFLSILDLYG 87 NF D+ Q + I G+ + +T+L ++ I++++ ++ E + S+L L G Sbjct: 178 EINFPAVDVNQVLTIYGELVNRTVLRPTALPAQLITLKTQTPLTKSEAIEALNSVLALNG 237 Query: 88 YSVITLDNGFLKVVRSANVKTSPGMIA--DSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 ++I + + F+K + + D S+ V++IV L+ + ++ P L Sbjct: 238 ITMINVGDKFVKALPQNQALQDSPEFSTGDPSQLPETGLFVSKIVQLKYLKPSEMMPALT 297 Query: 146 QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHLEYASAE 203 A G + E + + + + + +++EVI ++DV + +I ++YA A Sbjct: 298 PF--AKMPGGIFPVENNQTIFIRDYSENVKRMLEVIAKLDVEVPMDYETAVIPIKYALAA 355 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES 263 D++ L+ L S G + T Sbjct: 356 DISSALSSLGSGGGGGGTSIGRSGRTGSNLAGSG-----AAPGGYSTGTLGGTPGSNPFG 410 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV 323 + A T +++L+ A + N I ADE+TNSL+ Sbjct: 411 TSPGMGTSQSPFGGAQG-GNRTTSFTDRLQQIVKRASSSGEFQILGNNKIIADERTNSLL 469 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG 383 + A + + + ++ +LD+ AQVL+EAII+EV + +LGV + + + Sbjct: 470 VFASKQDMDVIKDIVGKLDVVLAQVLIEAIIMEVTLDDTRDLGVSYLQTSPSGNNYFQGI 529 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 I N + +AN FS N D+ +TA A++N+ ++L Sbjct: 530 GAIKNGPFASFSNFASTATNAANSLPSGFSYLAQF-----NNDFSATITAAATDNRINVL 584 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTS-GDNVFNTVERKTVGTKLKVTPQVNEGDA 502 + P I T A+ +G VP ++G+ + ++ VG L+VTP +N Sbjct: 585 SRPRIQTSHAVTANLQIGDTVPYVTGTYFGGLNGQASSQYQQTFVGINLQVTPLINPDGL 644 Query: 503 VLLEIEQEVSSVDSSS--NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 V+++I Q+V + + + ++ PT RT Q V VK +T++LGG + S V Sbjct: 645 VVMDITQDVQQLGTPTIIDNNPVPTTTKRTAQAKVSVKDRDTIILGGFISSTKSRSKSGV 704 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRID 620 PLL +IP++G LFR TS + L+V IRPT++ + ++ + R + D Sbjct: 705 PLLMNIPVLGYLFRSTSDSNKRTELIVLIRPTVLPTPEAAALVATRERDRLPGVKAAEAD 764 Query: 621 GKSKA 625 + + Sbjct: 765 FRKEE 769 >UniRef50_Q89HG9 Blr6022 protein n=3 Tax=Bradyrhizobium RepID=Q89HG9_BRAJA Length = 793 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 151/691 (21%), Positives = 266/691 (38%), Gaps = 79/691 (11%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 + Y NF NA + + I+G L IDP VQGT+++ S + Sbjct: 106 GGALAERDDGGGSGYDLNFENAPVATVAKVILGDVLNVGYTIDPRVQGTVTLASVRPVPK 165 Query: 73 QEYYQFFLSILDL----------------------------------YGYSVIT------ 92 + + L + G +V+ Sbjct: 166 ADALYVLENALRMSGVALVRDRTGYRLLPAPEAGPGGIDRSLNAAAGQGITVVPLRYVSA 225 Query: 93 --------------------LDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 + V S + + + S I P+ Sbjct: 226 QNIFKLLDAFGVKASTMRPDSARNTVIVSGSGSDRATAVDTILSFDADWMRGQSVGIFPV 285 Query: 133 ENVPARDLAPLLRQMMDAGSVG------NVVHYEPSNV-LILTGRASTINKLIEVIKRVD 185 N + + ++MD+G G N L+++ + + + I R+D Sbjct: 286 RNSSPEPVISEIEKIMDSGDGGISQNVIKFQPISRLNSILVVSQKPEYLKRAQTWIARLD 345 Query: 186 VIGTEKQQI--IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 TE + L Y +++ + +LN+++ G S ++ ++ S SG Sbjct: 346 RSDTEGVNLKSYPLRYGNSKLIVALLNEMLLSQSGTSSSSLDNASSQISPGAGISTSSSG 405 Query: 244 PEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS 303 A + + A + + G G K Sbjct: 406 NPVAALSALPTAGAGAATPVTAPAGSSLSARPAPS---MSATPGQDNTPGGISGGGAKAG 462 Query: 304 SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGL 363 +G + NV ITAD N++++ A+Q Q + I ++D + Q+ +EA I EV + L Sbjct: 463 PNGILQNVRITADVTNNAVLVYANQESQRIVEQTIRQIDRPQRQIAIEATIAEVTLNDQL 522 Query: 364 NLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 N GVQ+ + +A G + + +A A + Sbjct: 523 NYGVQFFLASQKGSISNTISGVSNSATIGSNTEPASNAVNAAAGALLGRALPGFNFLIGA 582 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNT 481 V+L AL +L+ PS+V LDN+ A+ VG VP +G+ T T+ + V NT Sbjct: 583 ENSPRVVLDALHGITNVKVLSNPSLVVLDNQAATLQVGDQVPFSTGTATVLTANNTVVNT 642 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGE 541 ++ K G L+V P+ N V+L+IEQE+SSV + S ++L PT + R +++++ V +G+ Sbjct: 643 IDYKNTGIILRVLPRANANGNVVLDIEQEISSVAAGSANSLTPTISQRRVKSSIAVTSGQ 702 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 TV+L GL+ + Q +P+L IP +G F + +T RA+ L++FIRPT+I+D Sbjct: 703 TVLLAGLISETENRQRQGLPILDSIPGMGDAFSHQTTARARTELILFIRPTVIKDGVDAH 762 Query: 602 SLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 +++E T+ R+ G S +V Sbjct: 763 VIAEEMRTKMNG----RLVGTSNPVVTVSPP 789 >UniRef50_C1A7C5 Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7C5_GEMAT Length = 621 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 130/610 (21%), Positives = 248/610 (40%), Gaps = 63/610 (10%) Query: 29 GANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGY 88 +F NA + + + LG+T+++ ++ + S + + S+L+ +G Sbjct: 68 SLDFANARLADVIRTLATMLGRTVILSDIPDVRLTFATPSAVSTSDLERVLESVLEAHGL 127 Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRP-GVGDELVTRIVPLENVPARDLAPLLRQM 147 +++ +V+ + + + + P LVT++VPL+++ A + A LR + Sbjct: 128 MLVSSG-TVAQVMPNDKAPMTGTLRSGFPFPDPPPLGLVTQLVPLQSIRADEGADALRAV 186 Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV----IGTEKQQIIHLEYASAE 203 + G+ +V SN L+L R + + + +++++ +D + +++L+YASAE Sbjct: 187 LAKGARVEIVA--RSNALLLVDRGANMARYLDLLRTLDAAPNGESGLRTYVVNLKYASAE 244 Query: 204 DLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEES 263 ++A ++ L + +L +++ R ++ D E Sbjct: 245 EMAGVVGSLYGVQVANAGAGSL------------------SDRSLSRALDTFRARDQETF 286 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV 323 T + + AR ++ + + A+ TNSLV Sbjct: 287 RTRQT---------------TSSSGAATPVTGATVARDSAAGLLVGRTTVVANTPTNSLV 331 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG 383 I L I LDIR AQVL E I E+ G G G+ WA N G G Sbjct: 332 IRTAPPNFPMLRETIEALDIRPAQVLFEVTIAEIALGRGFEFGIDWAAVNRGGDVQAQFG 391 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 P + + LL +AS ++ +L Sbjct: 392 NPEIPDTGSTSALLR--------------------VVRLDGTGVRALLRTIASKSEVQVL 431 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAV 503 ATP I+ +N+ AS VG VP +S ++ + ++ V+ + VGTKL + P +N+ + Sbjct: 432 ATPEIMAANNREASILVGSKVPFISSTRLGNDISIDRAVQYQDVGTKLAIIPTINDEGYI 491 Query: 504 LLEIEQEVSSVDSSSNST--LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVP 561 +++ QEVSS+ + + P +TR +++ G+T V+ GL+ + Q +P Sbjct: 492 SVQLLQEVSSLTPQTVAAALSAPVISTREASTRAVLRDGQTAVIAGLIGETRTTQDQGLP 551 Query: 562 LLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDG 621 +L DIP +G LF+ S+ R + L +F+ P ++R D + + R +D Sbjct: 552 ILKDIPWLGALFKRQSSTRQRTELAIFVTPYVVRSDADADGIRERIRKRMEDRSPGSLDD 611 Query: 622 KSKALVGSED 631 Sbjct: 612 TPLTRRPPPR 621 >UniRef50_Q04SX5 Type II secretory pathway component, protein D n=7 Tax=Leptospira RepID=Q04SX5_LEPBJ Length = 598 Score = 334 bits (856), Expect = 8e-90, Method: Composition-based stats. Identities = 133/622 (21%), Positives = 264/622 (42%), Gaps = 100/622 (16%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT-ISVRSNDTFSQQEY 75 + + AN+ + ++ F++ + L K IL+D S++G I++ S + Sbjct: 43 ATAPEEPAEKSFYANWRDTELNDFLKGMSAILKKNILLDESLKGKKITIISQKEIPIKNA 102 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 + F S+L+ G+ V+ + + IV +++ Sbjct: 103 FIFMKSVLESLGFGVVE------------------------------EPDLISIVKIKDA 132 Query: 136 PA-RDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 A + + ++++ VG+ QI Sbjct: 133 LARSPVVRVGKELIPETEVGDYRTIT--------------------------------QI 160 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 I +E E+L IL +L S + ++ + TN++++SG ++ L Sbjct: 161 IPIENTKPEELEPILKRLTSP-----------NTDVIVYRNTNTIVLSGSGADINKLLVL 209 Query: 255 LKSLDVEESEE--------GNTRVYYLKYAKATNLVEVL----TGVSEKLKDEKGNARKP 302 + LD++ E G+ +Y L++++A + L V + + Sbjct: 210 INELDLKLEEASPGAIASAGDVHIYTLEHSEAEKIAATLVKLDNPVVQSEELSPEKKVPG 269 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 ++ + +++NS+++TA + ++ +I LD R QVL+E +IVE+ + Sbjct: 270 QIPMKVEKIKAVGHKESNSVIVTATNAEWAEIRKIIKVLDSARKQVLLEVLIVELTSSDL 329 Query: 363 LNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 + G+ W K QF + N NP + S ++ Sbjct: 330 NDFGIDWRYKGEAFGQFNSGLSKEANIINSNGQ---------INPNVNTLSGFSLGFLKA 380 Query: 423 FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS----QTTSGDNV 478 + +L+A N ++L+ P ++T+DN+ A +VGQDVPV + S + Sbjct: 381 GSEQIIGILSANQGNENFNVLSAPQVLTVDNQEAEISVGQDVPVRTQSRNAGTGGTNAVT 440 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 + E + G KLK TP VN+ + + LE+ QE+ ++ + + PTFN R I+ ++ ++ Sbjct: 441 VDNYEYRPTGIKLKFTPHVNKNNRITLELFQEIKNIAEIALAGGNPTFNRREIKTSISIE 500 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 +++V+GGL+ + ++++ K+P LGDIP +G LF+ T+ + K NLMVFI P I+ + Sbjct: 501 NTQSIVIGGLISNDKQKRIIKIPFLGDIPYLGHLFKRTTEKIKKTNLMVFITPHILDSRE 560 Query: 599 VYRSLSKEKYTRYRQEQQQRID 620 ++ +K Q + +R Sbjct: 561 NADKMTVKKKMLQEQYELERER 582 >UniRef50_A6FZI7 Type II and III secretion system protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZI7_9DELT Length = 777 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 163/643 (25%), Positives = 289/643 (44%), Gaps = 44/643 (6%) Query: 24 ENEQYGANF-NNADIRQFVEIVGQHLGKTILIDPSVQ-GTISVRSNDTFSQQEYYQFFLS 81 +++ A++ Q V+ + + + + ++ G +++ S + + +E Y F + Sbjct: 72 AGKKFTITIPREAELEQLVQWMMTISCQKFIWNGKIRSGKVTILSPEKVTLREAYAAFYA 131 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP-GVGDELVTRIVPLENVPARDL 140 ++ G +V + + K+V SA+ K+ + + RP D VT++V +++ D+ Sbjct: 132 AIESMGLTVEPTGD-YFKIVESADAKSLNLPVYEDGRPVPNNDRYVTQLVRIKSGSTADI 190 Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLE 198 + ++ VV N+LI+T R S + +L+++IK +D G ++I L+ Sbjct: 191 TAVAGKLKSKQGSVEVV----GNLLIITDRGSVVRRLLKIIKELDEGGGTGEKIFFYQLQ 246 Query: 199 YASAEDLAEILNQLISESHGKSQM---------PALLSAKIVADKRTNSLIISGPEKARQ 249 YA AE++A+I+ + ES G S+ P ++++ D RT +LII+ E Sbjct: 247 YADAEEVAQIVRDVFGESSGSSKTSKTKKKSSTPEANFSRVIVDPRTGTLIITTSESDYA 306 Query: 250 RITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK---------DEKGNA 299 I L++ LDV G V L+ A L +VL +++ ++ A Sbjct: 307 TILKLIQQLDVRLPGGGGRIHVKQLRNADPKELAQVLQSLTQGGGGGSAAKKGGNKAATA 366 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 S+ +V ITADE T SLVI A + + L +I LD R QV +E ++E Sbjct: 367 GGASAELFSGDVKITADEATRSLVIIASAADYKSLEPIIDELDRDRKQVYLEIYLLEASV 426 Query: 360 GNGLNLGV------QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 G L G Q+ + + P + + + G+ + Sbjct: 427 GRSLTTGAGAHFAGQFG-QGEQQSVGLISSSPSPDVSSILLSPAALSGLAGGLIGPQLIG 485 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLS----- 468 + +GV++ AL SN+ +I+A P I T DNK A VG+ VP Sbjct: 486 TGAQLGLERDIPAFGVVIQALQSNDDVNIVAEPHIYTADNKEAQIEVGRKVPTPGALQFG 545 Query: 469 GSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNT 528 G+ + ++ R+ V +KVTP V + ++ L+IE E V + LG T Sbjct: 546 GAGGGTSLTPLQSINREDVTLDIKVTPHVKDETSLTLDIELEDRDVVDQ-DPVLGVTTTK 604 Query: 529 RTIQ-NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 R I+ VL + VVLGGL+ + E +VP LG IP++G LF+ ++ K NL++ Sbjct: 605 RRIKLENVLARDDLPVVLGGLMRERELENTQQVPGLGSIPILGWLFKRRVKQKEKINLLI 664 Query: 588 FIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSE 630 + P ++ D R + E+ TR R E +R + + + Sbjct: 665 VLIPHVVETADDIRRI-HERRTRERMEFLERETSFKRRDLDTN 706 >UniRef50_B1ZUM2 Type II and III secretion system protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUM2_OPITP Length = 673 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 143/645 (22%), Positives = 252/645 (39%), Gaps = 69/645 (10%) Query: 30 ANFNNADIRQFVEIVGQHLGKTILIDPSV-QGTISVRSNDTFSQQEYYQFFLSILDLYGY 88 +ADI + ++ + G++IL + T V + ++ E + L L Sbjct: 42 IKLPDADIDTVLGLLEIYTGRSILRPQQLPTATYRVVIDRKVTKSEAIMALETALSLNQI 101 Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRPG--VGDELVTRIVPLENVPARDLAPLLRQ 146 V L + FLKVV + VKT + + S G + T++ L+ + + P + Sbjct: 102 GVAPLGDKFLKVVALSQVKTEAPEMIEGSTLGLAPSGRVATKLFQLDFLRVNEFVPQITP 161 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK--QQIIHLEYASAED 204 ++ G VV + +N ++T S + ++ +++++D + L + A D Sbjct: 162 LLTPGVANGVVPLDKANAALITDTVSNLQRIEMLLQQLDKPSMAGLTPKFYQLNFTKASD 221 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE 264 L L + G Q S AD RTN +I+ + L+ LDV Sbjct: 222 LVTKLRGMF---QGPLQNQLGSSISYNADDRTNQVILLSDPRQHPLFDELIAKLDVRAEP 278 Query: 265 EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN-------------- 310 V YLK+A A ++ +L+ + A S S Sbjct: 279 NTRNEVIYLKHASAKDVAPLLSQLVSGQNTAAQKAAGTSGSVRAPVPQPNQPNQAATPDA 338 Query: 311 -----------------VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 + I DE++NS+V++ + ++ ++DI AQV +E I Sbjct: 339 AVALAGATVDTNEFSSYITILPDERSNSIVVSGTVDDIRLIRDLVEKVDILLAQVRIEVI 398 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 I EV + G+ N V Q ++ G I N A VA + + G+ + Sbjct: 399 IAEVTLDDSNKTGLSALNLTVATPQGSSQGTHITNFAGKVAGWDISQGVVNPLAFQAALG 458 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 + + IL+ P+IVT NK A VG+ +P+++G TT Sbjct: 459 DAG-------------------TRSNVKILSAPTIVTTHNKEAQILVGESLPIITGIYTT 499 Query: 474 SGDNVFNT---------VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV--DSSSNSTL 522 + + T V K + LKVTP + + ++ L+I+Q+V V S N++ Sbjct: 500 AVGSTTPTEPGFAQNQQVTYKDIAIDLKVTPLIGDDGSIQLKIDQKVDDVVRTISINNSD 559 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 P R + + V G+ VVLGGL + +K+ L +IP++ LF + + Sbjct: 560 QPVIGRRQATSFINVSDGQIVVLGGLQRTANTRGRNKLGFLVEIPILSHLFGARTNSVRR 619 Query: 583 RNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALV 627 L++FIRP +I D + + +EQ + Sbjct: 620 TELLLFIRPHVIAPDAGTADATNTINSLSNKEQINQYLSDPSKQP 664 >UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Burkholderia RepID=B2T7P2_BURPP Length = 791 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 181/736 (24%), Positives = 272/736 (36%), Gaps = 106/736 (14%) Query: 3 GLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILI-------- 54 L ++ LL A L+ Q NF NADI Q + +G GKTI++ Sbjct: 7 ALRRVATALLVAGLITAQTA--QAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQL 64 Query: 55 -----------------------------------------DPSVQGTISVRSNDTF--- 70 D +QG + N Sbjct: 65 NLVSENAVPEDQALKTLQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNTPVARG 124 Query: 71 -------------SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSS 117 S ++ N + V A+ I Sbjct: 125 DQVVTQVFVLKNESANNLLPVLRPLISPNNTVAAYPANNTIVVTDYADNVRRIAQIIQGV 184 Query: 118 RPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGN--------VVHYEPSNVLILTG 169 G + +V L+N A D+A L +M+D GS+G+ V +N L++ Sbjct: 185 DSAAGQSV--SVVQLKNANAIDIATQLNKMLDPGSIGSTDATLKVSVTADPRTNSLLIRA 242 Query: 170 -RASTINKLIEVIKRVDVIGTE--KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALL 226 + + + K +D T ++ L A A LA+ L + + Sbjct: 243 SNGARLAAARTLAKELDTPTTMPGNIHVVPLRNADATKLAKTLRGMFGKGGDSGSSSNSN 302 Query: 227 SAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT 286 A + S G L + Sbjct: 303 DANSFNQ----------NNSGGIGGNNSTGSSGTPPLPSGGLGSSSL-ASPMGGSGSGGG 351 Query: 287 GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 + + K S I AD TNSL+ITA + V L VI +LD RRA Sbjct: 352 YGAGGSNNGGFGNDKEKSDDNQQGGMIQADSATNSLIITAAEPVYRNLRAVIDQLDARRA 411 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QV +EA+IVE+ NLG+QW N TN N+ + G T Sbjct: 412 QVYLEALIVELNSNTSGNLGIQWQVANNSIFAGTNLQTGSSNSIVNLTAAAVAAGSTGGL 471 Query: 407 PAWDMFSAYN-GMAAG-----FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNV 460 G+ G F G LL AL+ ++L+TP+++TLDN+ A V Sbjct: 472 AGALGNGTLQQGLNIGWIHNIFGVQGLGALLQALSQTADANVLSTPNLITLDNEEAKIVV 531 Query: 461 GQDVPVLSGSQTT----SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDS 516 G +VP+ +GS + + + FNT +R VG L V PQ+ +G + L++ E S++ + Sbjct: 532 GTNVPIQTGSYSNLTSATATSAFNTYDRVDVGLTLHVKPQITDGGILKLQLYTEDSAIVT 591 Query: 517 SSNSTL----GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQL 572 +N+ GP F R+IQ+ VL GE +VLGGL+ D + SKVPLLGDIP +GQL Sbjct: 592 GTNNAATNPAGPEFTKRSIQSTVLADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQL 651 Query: 573 FRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 FR R K NLMVF+RP II D ++++ +Y + Q + + ++D Sbjct: 652 FRSEQKTRNKTNLMVFLRPVIISDRGTAQAVTSNRYDYIQGVQGAYKQDNNL-MKDNDDP 710 Query: 633 PVLDENTFNSHAPAPS 648 V S +P+ Sbjct: 711 VVPPMPIGPSQGGSPA 726 >UniRef50_C6C305 General secretion pathway protein D n=1 Tax=Dickeya dadantii Ech703 RepID=C6C305_DICDC Length = 714 Score = 332 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 218/568 (38%), Positives = 315/568 (55%), Gaps = 34/568 (5%) Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 + + ++ + D G + ++ + ++ S + Sbjct: 135 NNVAARDLAPLLRQLNDNAGAGSVVHYEPSNVLLMTGRAAVVKRLMEIVSTVDKTGDRNV 194 Query: 128 RIVPLENVPARDLAPLLRQM--------MDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 +PL A D+A L+ + + + V NVV +N ++++G + +++E Sbjct: 195 VTIPLTYASADDVAKLVNDLNKTDEKNALPSTMVANVVADSRTNSVVVSGEDNARQRVVE 254 Query: 180 VIKRVDVIG--TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTN 237 +I ++D ++I+L+YA A DL E+L + + S S+ + ++ Sbjct: 255 MIHQLDRKQVVQGGTKVIYLKYAKALDLIEVLAGNGTSGNRNSSSTNNRSSSTRSGSSSS 314 Query: 238 SLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG 297 + S + +S S Sbjct: 315 NSSSSSSSSSSNSSSSSNAGNGAYSSSGSGM-------------------GFGSTFGSSS 355 Query: 298 NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEV 357 ++ + V + A +QTNSL+ITA + L VI +LDIRR QVLVEAII EV Sbjct: 356 SSGGRTIIIQGKEVIMRAHDQTNSLIITAPPDIMRDLEQVINQLDIRRPQVLVEAIIAEV 415 Query: 358 QDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG 417 QD +GLNLG+QWANK G Q+TNTG+PI A GV Y+ +G +TS ++NG Sbjct: 416 QDADGLNLGIQWANKRAGMTQYTNTGMPISTAIVGVDQYRDDGTLTSNFS--SALGSFNG 473 Query: 418 MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN 477 +AAGF++G+W +LLTAL+SN+KND+LATPSIVT+DN A+FNVGQ+VPVL+GSQTTS DN Sbjct: 474 IAAGFYHGNWSMLLTALSSNSKNDVLATPSIVTIDNMEATFNVGQEVPVLTGSQTTSADN 533 Query: 478 VFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE---VSSVDSSSNSTLGPTFNTRTIQNA 534 +++TVERKTVG KLKV PQ+NEGD+VLL+IEQE V+ SS++S LG TFNTRT+ NA Sbjct: 534 IYSTVERKTVGIKLKVKPQINEGDSVLLQIEQEVSSVADSSSSTSSDLGATFNTRTVNNA 593 Query: 535 VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 V+V GETVV+GGLL+ + E SKVPLLGDIP++G LFR S +KRNLM+F+RPTII Sbjct: 594 VMVTNGETVVVGGLLNKSTVETDSKVPLLGDIPVLGNLFRSKSLTVSKRNLMLFLRPTII 653 Query: 595 RDDDVYRSLSKEKYTRYRQEQQQRIDGK 622 RD Y++ S +Y + EQ + K Sbjct: 654 RDRQQYQATSINQYKAFDSEQDLQRSNK 681 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 138/291 (47%), Positives = 209/291 (71%), Gaps = 1/291 (0%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 KG+ K L L+ + ++ + ++ A+F DI++F+ V ++L KT++IDP+V+GT Sbjct: 4 KGIMKRWGWLGLTALLISSTYSWSAEFSASFKGTDIQEFINTVSKNLNKTVIIDPTVRGT 63 Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 I+VRS D ++++YYQFFLS+LD+YG+SV+ +DNG LKV+RS + K+S +A+ +PGV Sbjct: 64 ITVRSYDMMNEEQYYQFFLSVLDVYGFSVVPMDNGVLKVIRSKDAKSSSIPVANDEQPGV 123 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 GDELVTR+VPL NV ARDLAPLLRQ+ D G+VVHYEPSNVL++TGRA+ + +L+E++ Sbjct: 124 GDELVTRVVPLNNVAARDLAPLLRQLNDNAGAGSVVHYEPSNVLLMTGRAAVVKRLMEIV 183 Query: 182 KRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 VD G I L YASA+D+A+++N L +++ K+ +P+ + A +VAD RTNS+++ Sbjct: 184 STVDKTGDRNVVTIPLTYASADDVAKLVNDL-NKTDEKNALPSTMVANVVADSRTNSVVV 242 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 SG + ARQR+ ++ LD ++ +G T+V YLKYAKA +L+EVL G Sbjct: 243 SGEDNARQRVVEMIHQLDRKQVVQGGTKVIYLKYAKALDLIEVLAGNGTSG 293 >UniRef50_B6QWW0 General (Type II) secretion pathway (GSP) D protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QWW0_9RHOB Length = 749 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 144/656 (21%), Positives = 267/656 (40%), Gaps = 94/656 (14%) Query: 18 PCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 A ++ NF + F++ +G L +ID ++GT++ ++ + ++ + Sbjct: 123 ASDAKATSDVVRLNFRGESLEYFIQQTLGGILQVNYVIDEPLEGTVTFQTENPIAKDQML 182 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 +L GY + +D + R ++ I S G +L RI+P+ + Sbjct: 183 SLVRVLLGRNGYILKLID-QIFHIGRPETIQA----IEQFSGVGSAGDLKLRILPVRSAS 237 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ--QI 194 + D A +L+ ++ AG+ V E SN + + R I E++ + +K + Sbjct: 238 SDDAAKVLQAILPAGASA--VAVEGSNKIAIRARPEDIGAAEELVNSLYNRDNDKTIVSV 295 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII-SGPEKARQRITS 253 + L+ +SA +A+ + L + + I+ + SL++ + QR+ Sbjct: 296 LRLQQSSASQVAKQITTLFQQLYPNQLTSP---LTIIPLETQQSLLVAVQSREMLQRVRR 352 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA- 312 + K +D + R+ LKY A + LT + E A Sbjct: 353 ITKEVDYNLLDTPKVRIITLKYLPANEIATQLTQILEGEGGSGVAAPPVEQRQQASRGNG 412 Query: 313 ---------------------------------------------------ITADEQTNS 321 I AD + N+ Sbjct: 413 SSARKFPVSANGESVGPAEDSISNRFSNANKLFDGLTDAPSNRVAVGSKVGIVADSRNNA 472 Query: 322 LVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN 381 L++ + + + V+ LD+ +QV++EA I EV + L+ GVQW Sbjct: 473 LLVNSTYKEFKHIRDVVQALDLPLSQVVIEATIAEVNINDNLSYGVQWYLAKGNFA---- 528 Query: 382 TGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKND 441 GGI + + G A V+L AL + K Sbjct: 529 ------------------GGIGAVADGASRPTKAAGGALSLNTVGVDVVLKALQNITKVK 570 Query: 442 ILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD---NVFNTVERKTVGTKLKVTPQVN 498 ++++P + LD + A +G VP S SQ++S D V N V+ K G L+V P + Sbjct: 571 VISSPYLTVLDGRKARLVIGDQVPFASRSQSSSNDGNVTVTNEVDVKDTGIVLQVEPNIR 630 Query: 499 EGDAVLLEIEQEVSSVDSSSN--STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQ 556 ++VLL+I+QEVS+V + +L PT TRTI + ++V++G T++LGGL+ + + Sbjct: 631 SNNSVLLQIQQEVSNVVQNKTEEGSLTPTIATRTINSDIVVESGRTILLGGLIQERKENG 690 Query: 557 VSKVPLLGDIPLVGQLFR-YTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 S VP+L IP+ G+LF+ T+ + + L+V I P ++R ++++++ Sbjct: 691 ESGVPILRKIPVFGELFKENTTNDTRRTELLVMITPRVVRKQSELQNITQKLRREL 746 >UniRef50_Q0BZ85 Type II secretion system protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZ85_HYPNA Length = 694 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 136/647 (21%), Positives = 268/647 (41%), Gaps = 69/647 (10%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQ 59 M G ++ A + A ++ F NA I + E++G+ G + IDPSV Sbjct: 72 MYGSSRFFDDAQTADTLVPADDSQTRGESFVFRNAPIDAVLNEVLGERFGLSYSIDPSVT 131 Query: 60 GTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 G+I++R + + + + L L G+ ++ F+ + + Sbjct: 132 GSITLRLDGILTPDQAVAGMDAALRLQGFEIVESGGNFVIARVGQFQGSVSKPVFLQPND 191 Query: 120 GVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 + ++ + ++ + + M+ + + ++L+G ++ ++ Sbjct: 192 VLPPGTSLAVLQIRYASVSEVTAIAKSMLAEDLIR--YGDDARGFVVLSGDPEQVSAGVQ 249 Query: 180 VIKRVDVIG--TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTN 237 ++K +DV + +I + AS E++A L ++S G S +P + Sbjct: 250 LLKSLDVNWLSSVSTALIPVVNASPEEIASDLEPILSRLGGVSVVPLE--------RLQT 301 Query: 238 SLIISGPEKARQRITSLLKSLDVEESEEG--NTRVYYLKYAKATNLVEVLTGVSEKLKD- 294 ++IS ++ + + LD + + VY +Y A +LV + G S Sbjct: 302 LMVISRQRESLDQAREWIARLDKGARPQLMRDVLVYEARYVNAEDLVALTEGGSASSSGF 361 Query: 295 --------------------------EKGNARKPSSSGAMDNVAITADEQTNSLVITADQ 328 G+ + ++++I D N++V Sbjct: 362 TTSAFNEPRKTSGRREVTDRPSETAALPGDTFSEPGTSLFESLSIRVDPGRNAVVARGAS 421 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFN 388 E L+ +++ LD + QVL+EA IVEV +G +LGVQW Sbjct: 422 VELESLSELLSLLDKPKRQVLIEATIVEVSLTDGTSLGVQWDLVQ--------------- 466 Query: 389 AAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSI 448 + + + D+ S + G++ + N D ++ ALA+ + +I+++P + Sbjct: 467 --------DRLSATFTDTGSGDLTSLFPGVSVSYINTDIAAVINALAATSDVEIVSSPRM 518 Query: 449 VTLDNKLASFNVGQDVPVLSGSQTTS---GDNVFNTVERKTVGTKLKVTPQVNEGDAVLL 505 + L+N+ A VG VP+++ S + G V N+ + G L VTP++ G V + Sbjct: 519 LVLNNETARLQVGDQVPIITQSAVSVSDPGAPVVNSTTYRDTGVILTVTPRIRAGGMVEV 578 Query: 506 EIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLG 564 +I QEVS V ++ S++ PT + R+IQ+ + V G T VLGGL+ + +P+L Sbjct: 579 DISQEVSGVSETTTSSIDSPTISQRSIQSVLAVPDGSTAVLGGLMSSTRSYSRTGIPILK 638 Query: 565 DIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRY 611 D P++G FR T+ + L+V I PT++ ++ + Sbjct: 639 DTPVLGAAFRSTNQSERRTELIVLIEPTVVVSEEPSSDIPALLRAAL 685 >UniRef50_D0HB85 S-protein secretion component D n=1 Tax=Vibrio mimicus VM223 RepID=D0HB85_VIBMI Length = 713 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 122/636 (19%), Positives = 243/636 (38%), Gaps = 83/636 (13%) Query: 24 ENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSV---QGTISVRSNDTFSQQEYYQFF 79 ++ + + ++ F+ +G+ L ++D + + I++R N+ + + Sbjct: 99 SDQLVSLSADGLELNHFINLALGEVLKLNYVVDSDLAKNKTPITLRINEPVTSERMLGLV 158 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 +L + ++ + + S P +I S P + V IVP+ + + Sbjct: 159 EEVLMVNKVALAVEGDLVKVIPASKTDSAVPTLIDSSIAPILRYGKVVEIVPIYYLSIIE 218 Query: 140 LAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG--TEKQQIIHL 197 + L+ + G V+ N L++ I+++ +++ +DV ++ ++ Sbjct: 219 ASSLVSDFLLDQGGGKVLRQIHLNALMIIANKEDIDRVYALLREIDVPNRVSQNITLVAP 278 Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRITSLLK 256 +Y S E L L +S + M + ++ N+L+++ K +K Sbjct: 279 KYVSLETLMADLQLSLSAASVPVSMNTGKNGVVLIPLSNNTLMVTSSTKGWMNYTLEWIK 338 Query: 257 SLDVEESEEGNTRVY--YLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA------- 307 LD + EGN +Y Y++ KA + V++ + + + + Sbjct: 339 QLDQPKKIEGNQGIYAYYMQNTKAEDAWGVVSAIFSEQMGANKEEKSKGTDLVAAAQQAI 398 Query: 308 --------------------------------MDNVAITADEQTNSLVITADQSVQEKLA 335 +N + D + NS+ T + + ++L Sbjct: 399 QEQQSTDTGNTPGNTGILRSNKSKSNKDMQVVTENYRVVVDSKRNSIFFTGEYADYQRLV 458 Query: 336 TVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVAD 395 ++ +D R QVL++A I E+ + GV + + T N Sbjct: 459 ELLRFVDKRPQQVLIQATIAEINIDDAQQFGVDFDITSGTITGGTKGLAGFDN------- 511 Query: 396 YKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKL 455 ++ GD + A K +L++P I+ ++ + Sbjct: 512 --------------------GVLSLTGVFGDVTMGFRAALKTGKAQVLSSPRIIAMNQEA 551 Query: 456 ASFNVGQDVPVLSGSQTTSGDNV--FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS 513 A VG + V++G + GD+ T + G L + P +N+ V LEI QEVS Sbjct: 552 ARITVGDQIQVVTGEVSGGGDDSKATTTYKYVDTGVTLDIIPTINQNGLVELEISQEVS- 610 Query: 514 VDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLF 573 N G N R++Q +L +G+TV +GGL+ E ++VPLLGDIP +G LF Sbjct: 611 -----NKGTGTDINKRSLQTKLLADSGDTVFMGGLIKQDIGETDNRVPLLGDIPYLGNLF 665 Query: 574 RYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYT 609 +Y S + L++ I P +I + + E Sbjct: 666 KYKSQTQKSVELVLLITPYVINSREDAIFYTNEYQQ 701 >UniRef50_A6DJN7 Secretion protein XqhA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJN7_9BACT Length = 738 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 137/659 (20%), Positives = 266/659 (40%), Gaps = 62/659 (9%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 M+ L ++ + P E +N ++ + Q L L+DP V+G Sbjct: 86 MQKLKRLADLMKERAPDPKTFE-EKVSVFLTLDNVELGVVINEFSQVLSFQYLVDPGVKG 144 Query: 61 TI--SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSR 118 + S+ ++ + + ++ F +L + + G ++V + Sbjct: 145 FVKSSISLENSMTVYDAWKLFEQVLYINNAYASIDEAGIIRVFPLTKIAQDALASVPGQA 204 Query: 119 PGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLI 178 G + L+N+ A + P+L+ M A + +V SN L++ ++ +++L Sbjct: 205 QGN---VNIVYYSLQNITAAEALPILKPFMSANASASV--IPSSNALLIVETSANMDRLN 259 Query: 179 EVIKRVDVIGTEKQQII--HLEYASAEDLAEILNQLISESHGK--SQMPALLSAKIVADK 234 +++ +D G I + + L L I + K+ + Sbjct: 260 TILQTMDANGQSNWPQIAYRCRFIDSAVLLAELQSAIPVLGFSLAAGENQGAGVKMASID 319 Query: 235 RTNSLIISGPEKA-RQRITSLLKSLDVEESEE-GNTRVYYLKYAKATNLVEVLTGVSEKL 292 R ++ S P A + ++ LD ESE Y +++ + +LV L Sbjct: 320 RMQIIVASAPSGAVLNEVYKWIQILDTAESEGATKVFYYPVRHGISADLVAALQLFFPNS 379 Query: 293 KDEKGNARKPSSSGAM------------------------------------DNVAITAD 316 + S+S + + V I D Sbjct: 380 ANAASPQTNASNSTSSRASTNNTNNRTTPNRTTTNRNTTNSSDVTSIKSLFEEPVTIFED 439 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA 376 + N LVI + ++ LD QV+++ VEV+ G GL G ++A + Sbjct: 440 SRRNQLVIRTKPKTYSMVKAILRHLDAPAMQVMIQVTAVEVELGEGLEFGFEYAATDKFG 499 Query: 377 QQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALAS 436 +G+ + ++ + GG+ +P + G+ F + A+A Sbjct: 500 SGDNESGVGVGSSTADTPSFGPPGGL---DPGISLLLQSAGVDNEF------AFVQAVAG 550 Query: 437 NNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQ 496 ++ +++L TP I+TL+ + A N+GQ+VPV +G+ +TS +N F +E ++ G L+V PQ Sbjct: 551 DSSSELLFTPHILTLNGEEAEINIGQNVPVRAGTTSTSSNNDFEQIEYRSTGVLLRVLPQ 610 Query: 497 VNEGDAVLLEIEQEVSSVDSSSNST---LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 V+ V L+ E +SS+ S P+FN + +L+K ET++LGG++ + Sbjct: 611 VSADKYVTLDTEIVISSIVEQSPEEVLIDSPSFNENKVTTKLLIKNNETILLGGIIQKVA 670 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 E S VP L DIP +G LF+ +T ++ L++FI+ T+I ++ + + Sbjct: 671 SESTSGVPFLKDIPGIGFLFQSATTGSREKELVIFIKATVIEQKSDFQDVVNRYGNAMK 729 >UniRef50_Q3JD22 General secretion pathway protein D n=2 Tax=Nitrosococcus oceani RepID=Q3JD22_NITOC Length = 833 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 152/759 (20%), Positives = 264/759 (34%), Gaps = 150/759 (19%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILID----------------- 55 A P NF N DIR+ V+ I+G L + +ID Sbjct: 90 AASKPRTFQVREGAILLNFENTDIREVVKTILGDILEENYVIDRAVQGTVTVQTGRPLPK 149 Query: 56 -------------------------------PSVQGTISVRSNDT----------FSQQ- 73 +VQG +S R + Sbjct: 150 DALMPTLETLLRLNNAALIQAEGLNKIVPLNQAVQGNLSPRLSRAKSTVGYDVRIMPLDY 209 Query: 74 ----EYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 E + + G + L + +A D + + + Sbjct: 210 IGAGEMEKILEPFVPKDGLVRVDPARNLLILAGTAKELDQWQETIDIFDVNWLEGMSVGL 269 Query: 130 VPLENVPARDLAPLLRQMMDAGSV------GNVVHYEPSN-VLILTGRASTINKLIEVIK 182 LE A L L +M + + E N +L++T ++ + + I+ Sbjct: 270 YRLEYTDAELLVNELNIVMGPEATTPLAGMFRFIPIERLNGILVVTSQSQYLKEAKTWIE 329 Query: 183 RVDVIGTEKQQ---IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 R+D + + + +++ A+ LA +L G A ++ A +S Sbjct: 330 RLDQGEDTESERLYVYPVQHGRADHLAALLQSAFGLEGGGGISSARVAPGQQAVGLFSSS 389 Query: 240 IISGPEKARQRITSLLKSLDVEES--------------------EEGNTRVYYLKYAKAT 279 R + G R + A Sbjct: 390 RGGSGGFGSSRGGGFGGGGFGSSRGGGGFGGGTLGSSRGGVGSSQMGGLRGFKASRGAAP 449 Query: 280 NLVEVLTGVSEKLKDEKGNARKPSSSGAMDN-----------------VAITADEQTNSL 322 + + + + E +S A V + D + N+L Sbjct: 450 DASQEEELRAFQASTENATESPQASGSAAGGIKFTLPGAKDDEDKKPEVRVIPDVENNTL 509 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNT 382 +I+A V EK+ + +LDI QVLVEA I EV + L GV+W +N Sbjct: 510 LISAPPPVYEKILVALHQLDIPPRQVLVEATIAEVTLTDDLQYGVRWFFEN--------- 560 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDI 442 GV DY G +T+A P F+ AAG ++L L+S K + Sbjct: 561 --------TGVKDYLGRGALTAAIPGTSTFTYGLFDAAGAA----RIVLDTLSSQTKVKV 608 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDA 502 L++P ++ LDN+ A VG +P+ +GS G N ++ + G L VTP+VN G Sbjct: 609 LSSPQLLVLDNQTAEIRVGDQIPIQTGSTIGIGGNSTTRIQFRDTGVLLTVTPRVNAGGR 668 Query: 503 VLLEIEQEVSSVDSS------------------SNSTLGPTFNTRTIQNAVLVKTGETVV 544 V +E+ QEV+ V + PTF R+ ++ V V++G+T+V Sbjct: 669 VTMELTQEVTDVGGTKLPTSAAPSGDGDDDNNNQTVGNNPTFLQRSFRSVVTVQSGDTIV 728 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 LGGL+ D + S +P L +PL+G LF T+ +++ L+V + P ++R+ R ++ Sbjct: 729 LGGLIRDNERFSDSGLPFLHKLPLIGPLFGATAKSKSRTELIVLMTPRVVRNQYEARLVT 788 Query: 605 KEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSH 643 +E + R + A + ++ + ++ Sbjct: 789 EEFREKLRNASDVAEEMGGIAPIAIPRKENKEKPSPSAD 827 >UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZY4_CHRSD Length = 668 Score = 327 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 114/539 (21%), Positives = 202/539 (37%), Gaps = 55/539 (10%) Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSS-----RPGVGDE 124 ILD+ ++ ++V + + + GD Sbjct: 178 LPGTRLPDALDRILDVSDFAT-----PVSRIVPNRQDDAVTLTLENREPFQHLVTQRGDR 232 Query: 125 LVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 L+ + P N D N + + VL + S +N + Sbjct: 233 LIVDVQP-RNEQTSDARDASPTYTGEPISLNFQNIQVREVLSVLSDFSGLNIVA------ 285 Query: 185 DVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 ++ + + + + + +L + +A +R +I+ P Sbjct: 286 -----------------SDSVQGSVTLNLQQVPWDQALALILQSHGLASRRNGDVIVVAP 328 Query: 245 --EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 E A+ +L E+ T ++YAKAT+L +L G Sbjct: 329 VDELAQMERQTLENRAQSEQLAPLVTDYVQVRYAKATDLAAMLRG-------------SE 375 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 + +T DE+TN+L++ + + ++ RLD+ QV +EA IV +D Sbjct: 376 GFGLLSERGRVTVDERTNTLLVRDTREQLASIRGMLERLDVPVRQVQIEARIVIARDTAS 435 Query: 363 LNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 LGV W F + G+ + + G++ D + Sbjct: 436 RELGVNWGISQRQGVTFDDDGVGSVVDRNPSGANRGSAGLSVDLGDSDGSGSTFSFGYLS 495 Query: 423 FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTV 482 + + L AL S K+ ++ P ++T + K A GQ++P + + + V Sbjct: 496 GDVLLDLELRALESEGKSQTISQPKVITANQKTAVIKQGQEIPYQESTSSGA-----TNV 550 Query: 483 ERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGET 542 E K L+ TPQ+ ++++++ +V ++ P +T +I+ VLV G T Sbjct: 551 EFKEAVLSLEATPQITPDGSIVMDLLINNDTVAD-NSYDGAPAIDTNSIETQVLVDDGAT 609 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 VVLGG+L + K P LGD+PL+G LFRYT K L++FI PTII D R Sbjct: 610 VVLGGILTSEQLRNLYKTPFLGDLPLIGSLFRYTQESNEKVELLIFITPTIIGDGQANR 668 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 20/299 (6%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 + E NF N +R+ + ++ G I+ SVQG++++ + Sbjct: 250 ASPTYTGEPISLNFQNIQVREVLSVLSDFSGLNIVASDSVQGSVTLNLQQ-VPWDQALAL 308 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 IL +G + + + + + + ++ LVT V + A Sbjct: 309 ---ILQSHGLASRRNGDVIVVAPVDELAQMERQTLENRAQSEQLAPLVTDYVQVRYAKAT 365 Query: 139 DLAPLLR---QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII 195 DLA +LR G V E +N L++ + + +++R+D + Sbjct: 366 DLAAMLRGSEGFGLLSERGRVTVDERTNTLLVRDTREQLASIRGMLERLD---------V 416 Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLL 255 + E I S G + + D S++ P A + L Sbjct: 417 PVRQVQIEARIVIARDTASRELGVNWGISQRQGVTFDDDGVGSVVDRNPSGANRGSAGLS 476 Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 L + YL +++ L + + + + +P A A+ Sbjct: 477 VDLGDSDGSGSTFSFGYLS----GDVLLDLELRALESEGKSQTISQPKVITANQKTAVI 531 >UniRef50_B5JLH7 Bacterial type II and III secretion system protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLH7_9BACT Length = 736 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 153/720 (21%), Positives = 277/720 (38%), Gaps = 105/720 (14%) Query: 4 LNKITCCLLAALLMPCAGHAENEQY-------GANFNNADIRQFVEIVGQHLGKTILIDP 56 + + C L AAL + E + +++ +EI+ + G++IL Sbjct: 1 MLAVACGLAAALPLQGQDTTERTAPDRNTVVESYKVVDQELQGVLEILSEMTGRSILRPQ 60 Query: 57 SV-QGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMI-- 113 ++ I+ S + E S+L L V L FLKVV ++T + Sbjct: 61 ALPTPKITFDSGGPITIGELILALESLLSLNDIGVSPLGERFLKVVPLNEIRTEAPELVI 120 Query: 114 ADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRAST 173 + + ++V+++ L+++ ++ ++ + G +++ ++ SN +I+T S Sbjct: 121 SSLAERQSSGQVVSKLFRLQHLDSQTFQQQIQPFLSPG-FSSIIPFQNSNAVIVTDTISN 179 Query: 174 INKLIEVIKRVDVIGTEKQQ--IIHLEYASAEDLAEILNQLISE---------------- 215 + +L V+ VD + L++A A ++A+ + Q+I + Sbjct: 180 LQRLEYVVGEVDKPSRLNIEPVFYTLQFAQASEVAQQIQQMIEDARNRFGDQNNSNTGRV 239 Query: 216 --------------------SHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLL 255 SQ+ + I AD RTN +II + ++ Sbjct: 240 NNNSGNVPPPVPPGVGGELEGGSISQILFGSNTAISADDRTNQIIIMTAPTNLEFFEGII 299 Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN----- 310 + LD++ V LK+A AT + +L+ N R S Sbjct: 300 QKLDIKADPSTRIEVIPLKHADATEVASLLSQFVSGKTKNDTNDRTNSPGNTNTRSGRSG 359 Query: 311 ----------------------------------------VAITADEQTNSLVITADQSV 330 + I ADE++NSLVI+ +S Sbjct: 360 GAGSPTFGGANQNDTPVRETLGAGAGSSVGEDRDSQFSTFMTILADERSNSLVISGTRSD 419 Query: 331 QEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAA 390 + + ++ ++DI QV +E II EV + G F+ T + + Sbjct: 420 LDLMTVLVNKIDILLPQVRIEVIIAEVSLNENE-------GLSRGMDAFSMTYAEQDDGS 472 Query: 391 QGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG-DWGVLLTALASNNKNDILATPSIV 449 + + N G +G +L SN+ +L+ P++V Sbjct: 473 ANITIPGPGDDAPAINFLGLGLDGSFNYNDGVISGLTLNGILNTARSNSNVQLLSVPTLV 532 Query: 450 TLDNKLASFNVGQDVPVLSGSQTTSGDNVF-NTVERKTVGTKLKVTPQVNEGDAVLLEIE 508 T NK A+ V + P+++ SQT+S + F V+ + +G +L VTP + D + LEI+ Sbjct: 533 TTHNKEATIVVAEARPIVTSSQTSSISDTFRQNVQYEDIGIELTVTPLIGPNDVIQLEID 592 Query: 509 QEVSSVDS--SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 Q++ + + + P R + V V E VVLGGL + + SK+ LG+I Sbjct: 593 QKIDDISGKVTIDGNDQPIIGRRQATSYVSVANHELVVLGGLQRNRVTKGRSKMSFLGEI 652 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKAL 626 PL+G LF S E K L+VFIRP +IR D + +K + ++ L Sbjct: 653 PLLGGLFNRRSDESVKTELLVFIRPEVIRTTDDVNQDASKKIDELEAAAAIQRFLETGEL 712 >UniRef50_Q15QU6 Type II and III secretion system protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QU6_PSEA6 Length = 711 Score = 325 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 147/635 (23%), Positives = 255/635 (40%), Gaps = 61/635 (9%) Query: 29 GANFNNADIRQFV-EIVGQHLGKTILIDPSVQGT---ISVRSNDTFSQQEYYQFFLSILD 84 FNN I ++ EI G LG +I+PS++ +++R N Q+ Y+ L Sbjct: 107 RLTFNNMPIPVYINEIFGNQLGLNFVIEPSLKNAEDLVTMRLNQAVDQKNLYELATQTLK 166 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP--GVGDELVTRIVPLENVPARDLAP 142 YG + +N L +P +I+ + P + + PL++V + Sbjct: 167 SYGVTTSIKNNAILFSFSENAGNETPLLISGRTLPEVPSNSRPLFYVYPLQSVTTPMIRS 226 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ--QIIHLEYA 200 L QM + N LI G I + + K +D + +II + Sbjct: 227 WLSQMFPKKE-LEIKEDIYQNALIFIGPNRAIEQAVAAAKLLDKPAMQDMFSRIIRPTLS 285 Query: 201 SAEDLAEILNQLIS-ESHGKSQMPALLSAKIVADKRTNSLIISG-PEKARQRITSLLKSL 258 DLA L ++ E + Q + +++A N L++ E + K+L Sbjct: 286 DVNDLANNLENVLKAEGYAVRQSDGASAIRLLALSSVNQLVVFAKSENVLNHVIDWAKTL 345 Query: 259 DVEESEEG--NTRVYYLKYAKATNLVEVLTGV---------------SEKLKDEKGNARK 301 + E+ ++ Y ++ +AT++V++L + + + Sbjct: 346 ETEQHKKVDKGLFSYPVQSTQATHIVDILNSLGVADYKSNNSDKSNTTNSNNSAPRTSNY 405 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 P + DEQ N+++ + ++ VI +LD A V+VE I+ EVQ + Sbjct: 406 PDALEEDVKGRYAVDEQLNTILYSGSGKDWLQILPVIKKLDKPAASVMVEVILAEVQLND 465 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 + GV+W + + GITS+ A Sbjct: 466 SEDTGVEWLANSSLGR----------------------FGITSSTIGGLGLGASGFNMTL 503 Query: 422 FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG---SQTTSGDNV 478 G +L N K +I + P ++ AS +VG ++PV++ S T S V Sbjct: 504 DSAGQTRAMLNLFYKNEKANIRSRPRLMVKSGGEASIDVGNEIPVITSNSQSTTDSDAVV 563 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLV 537 T+ + G L+V P V+ V +EI QE+S +S+S + PT R I V + Sbjct: 564 LQTISYRKTGVLLEVKPTVHASGFVDIEITQELSEATETSSSDIDSPTILNRKISTTVTL 623 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 + G +V+LGGL+ + VP+LG +P++G+LF S + + LM+ I P I+ Sbjct: 624 RDGGSVLLGGLISSTTSTGTQGVPILGRLPMIGKLFSTDSNAQDRTELMIMIIPYILNSP 683 Query: 598 DVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 D L+ E Q+ RID S +VG + Sbjct: 684 DEAEQLTDE-------LQKARIDKLSDGMVGKKRP 711 >UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3G3_9GAMM Length = 672 Score = 324 bits (830), Expect = 8e-87, Method: Composition-based stats. Identities = 109/483 (22%), Positives = 195/483 (40%), Gaps = 37/483 (7%) Query: 128 RIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 R L L ++ + D G + + L+ I + D Sbjct: 211 RYEHLAYQSENTLVVEVKPLPDQPQAGQDRNQFGYSGEKLSLNFQNIEVRAVLQLLADFT 270 Query: 188 GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--E 245 G +++ + L + + +L K +A ++ ++++ P E Sbjct: 271 GM--------NLVTSDTVKGNLTLRLKNVPWDQALDIILKTKGLAMRQNGNVLMVAPAAE 322 Query: 246 KARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS 305 A + L + E E T + +K+AKA L +L D K S Sbjct: 323 IAAREKQELEAQKQLVELEPLYTEIVEIKFAKADLLATLLRT------DGKQGGNSGQSG 376 Query: 306 GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 +IT D++TNSL+I + VI LD QVL+E+ IV + L Sbjct: 377 FLSPRGSITIDDRTNSLLIRDTADNLVDIRQVIDELDKPVRQVLIESRIVIANNDFNKEL 436 Query: 366 GVQWANKNVGAQQFTNTGLPIFNA-----------AQGVADYKKNGGITSANPAWDMFSA 414 GV++ + + A V N + +NP+ + A Sbjct: 437 GVRFGTSAQSNTLGAGSSGSLTGLSTNPNNDDQIRANSVVGNDLNVNLPVSNPSGSIGLA 496 Query: 415 YNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS 474 + G + L+A+ + K +++++P ++T + + A+ G ++P + + + Sbjct: 497 LAKLPLGMI---LELELSAMQAEGKGEVISSPRVITSNQQQATIEQGTEIPYQEATSSGA 553 Query: 475 GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNA 534 V K KL VTPQ+ D +++++E V P+ +TR+++ Sbjct: 554 -----TNVSFKEAVLKLDVTPQITPDDRIVMDLEVSKDEVGEV--FLGVPSIDTRSVKTQ 606 Query: 535 VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 VLV GETVVLGG+ + + + V +VP GD+P VG LF+ T E KR L+VF+ P I+ Sbjct: 607 VLVDNGETVVLGGIYEQSTNDNVERVPFFGDLPYVGFLFKNTFKEDRKRELLVFVTPKIV 666 Query: 595 RDD 597 ++ Sbjct: 667 KEG 669 >UniRef50_A4C8H8 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C8H8_9GAMM Length = 685 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 120/621 (19%), Positives = 261/621 (42%), Gaps = 54/621 (8%) Query: 22 HAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQG---TISVRSNDTFSQQEYYQ 77 +E + + ++ F+ ++G+ L + ++ ++ ++++ + ++++ + Sbjct: 94 FSEQKTIEMSAETLPLQDFLHLVLGERLKVSYVLSDEIKADSQSVTLNIQNAVTERKLFL 153 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSP---GMIADSSRPGVGDELVTRIVPLEN 134 ++D GY++ DN F +++ + G + + ++VP E Sbjct: 154 LTEELIDERGYTIRFNDNIFYVHKKNSEQGQTDLTYGYGKSINDVPQTSGDIVQMVPFEY 213 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 ++ LRQM+ S N + + G+ I + +E+I D + I Sbjct: 214 GMQLSMSNTLRQMIGVKS----TSDPARNTINIFGKRQDILRALELIDIFDRPAIANRHI 269 Query: 195 IHLE----YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKA-RQ 249 + + + + +V ++ N LI ++ + Sbjct: 270 GVYKSTFVNGTELLTKLKELLTQEGIKLGDGIDTSSTITVVNMEKQNRLIFFAVKQDVIE 329 Query: 250 RITSLLKSLDVE-ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP------ 302 R +D ++ E +Y +Y++A ++ E L + ++ + Sbjct: 330 RAIFWANQIDKPIDTAEKQYFIYQPQYSRAVDMGESLEALIGEVSSLTTSTSAAQENSRK 389 Query: 303 --SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 + + + +++ + DE++NS++ +++ ++ RLDI Q+++E II EV Sbjct: 390 RGAVTASSEDLKMVIDERSNSVIFFTTGEKYQQILPLVKRLDILPKQIMLEVIIAEVSLT 449 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 N GV++A KN G ++ M + G++ Sbjct: 450 NEFKQGVEFAFKN--------------------------GNYGTSTEKAFMGDGFGGLSY 483 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL--SGSQTTSGDNV 478 +++ L +N+ +IL+ PS+V D A+ NVG D+P++ + S +GD Sbjct: 484 LLQGTQGKLIVNLLQTNSLVNILSRPSLVVRDGVNATINVGTDIPIVGETASDPINGDRQ 543 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS-SVDSSSNSTLGPTFNTRTIQNAVLV 537 +E + G +L VTP VN VL+EI+Q++S V+S S + P+ RTI V+ Sbjct: 544 TTKIEYRKTGVELAVTPTVNAQGIVLMEIKQKISNQVESGSTVSGNPSVFERTINTEVVA 603 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 ++G+T++LGGL+ + + S+VP IP++G LFR + K L++ + P +I Sbjct: 604 ESGQTIILGGLISENKSTKASRVPFFSGIPILGNLFRADTESGDKTELVILVTPRVIESS 663 Query: 598 DVYRSLSKEKYTRYRQEQQQR 618 + + K + + + Sbjct: 664 SEWDDVKKLFDNAFENLKLPQ 684 >UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-like n=8 Tax=Pseudomonas syringae group RepID=Q4ZRP9_PSEU2 Length = 776 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 115/570 (20%), Positives = 230/570 (40%), Gaps = 31/570 (5%) Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 S E + + ++ L + + + D+ + Sbjct: 210 RYISATEMQKLLKPFARENAFLLVDPARNVLSLAGTPEELANYQDTIDTFDVDWLKGMSV 269 Query: 128 RIVPLENVPARDLAPLLRQMMDAGSV------GNVVHYEPSNVLI-LTGRASTINKLIEV 180 + L+ +L P L++M S + E +N ++ ++ + ++++ E Sbjct: 270 GVFGLQRASVGELMPELQKMFGPESGMPLAGMVRFLPIERTNSVVAISSQPEYLHEVGEW 329 Query: 181 IKRVDVIGTEKQQ--IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS 238 I +D G + Q + + A DLA+ L Q+ K PA ++ + ++ Sbjct: 330 IHTIDEGGGNEPQMYVYDVRNMKATDLAKYLRQIYGTGAIKDDSPAKVAPGLRTTTLSSL 389 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKY-------AKATNLVEVLTGVSEK 291 G ++ L S G +++ + Sbjct: 390 NSSGGSGVGGMSSSNGLGSNGGGMGNGGGFGNSQSMNNSQNSADSESEGDDQGGGDSDSD 449 Query: 292 LKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 + G+ +S + ITA + +N L++ + +++ + I RLD QV +E Sbjct: 450 SASQDGSGSSGASKSLDASTRITAQKSSNQLLVRTRPAQWKEIESAIKRLDNPPLQVQIE 509 Query: 352 AIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM 411 I+EV+ L++GVQW + T + +QG + Sbjct: 510 TRILEVKLTGELDMGVQWYLGRLAGNSGTTGNVTNTAGSQG-----------AIGTGGAA 558 Query: 412 FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS- 470 ++ + F + + V L AL +N + +L+ PS+V ++N+ A VG ++P+ S Sbjct: 559 LASTDAFFYSFVSNNLQVALRALETNGRTQVLSAPSLVVMNNQQAQIQVGDNIPISQTSI 618 Query: 471 -QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD--SSSNSTLGPTFN 527 T+ ++VE G L V P++N G V ++I+Q+VS D ++++ P + Sbjct: 619 NTNTNTGTTLSSVEYVQTGVILDVVPRINPGGLVYMDIQQQVSDADSSGTTDANGNPRIS 678 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 TR++ V ++G+TV+LGGL+ + E V+ VP LG IP + LF TS + + L+V Sbjct: 679 TRSVATQVAAQSGQTVLLGGLIKQDNAETVNAVPYLGRIPGLRWLFGNTSKSKDRTELIV 738 Query: 588 FIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 I P +I R ++ + + + + + Sbjct: 739 LITPRVITSSSQARQVTDDYRQQMQLLKPE 768 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 111/287 (38%), Gaps = 11/287 (3%) Query: 24 ENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 E NF N I+ + I+G L + I V+G +S ++ ++Q+ ++ Sbjct: 102 ETGDIVFNFTNQPIQAVINSIMGDLLHENYSIAQGVKGDVSFSTSKPVNKQQALSILETL 161 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L ++I N ++ S + ++ + + R+ PL + A ++ Sbjct: 162 LSWTDNAMIKQGNR-YVILPSNQA-VAGKLVPEMRVAQPSAGMSARLFPLRYISATEMQK 219 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHLEYA 200 LL+ + ++ NVL L G + + I DV + + L+ A Sbjct: 220 LLKPFARENAF--LLVDPARNVLSLAGTPEELANYQDTIDTFDVDWLKGMSVGVFGLQRA 277 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLLKSLD 259 S +L L ++ G MP + + +RTNS++ IS + + + ++D Sbjct: 278 SVGELMPELQKMFGPESG---MPLAGMVRFLPIERTNSVVAISSQPEYLHEVGEWIHTID 334 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 E VY ++ KAT+L + L + + + K + Sbjct: 335 EGGGNEPQMYVYDVRNMKATDLAKYLRQIYGTGAIKDDSPAKVAPGL 381 >UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadaceae RepID=B9MDF0_DIAST Length = 696 Score = 321 bits (823), Expect = 5e-86, Method: Composition-based stats. Identities = 100/489 (20%), Positives = 209/489 (42%), Gaps = 29/489 (5%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK-------- 182 P++ + A +R +D Y+ N ++ R ++ Sbjct: 219 PVQTITASQQGERVRLTIDPVGEWEHSAYQSDNQFVVEVRPKKVDLTKLTQGPAYSGEKL 278 Query: 183 RVDVIGTEKQQIIHL-------EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKR 235 ++ E + ++ + +++ + L + + + ++ AK + ++ Sbjct: 279 SLNFQNIEVRSLLQVIADFTNFNIVTSDTVTGALTLRLKDVPWDQALQIIMDAKGLGMRK 338 Query: 236 TNSLIISGPEKARQR--ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK 293 + +++ P+ +L +++ E T+ + L YAKA ++V LT S+ Sbjct: 339 SGTVLWIAPKDEIDERTKKDYEAALAIQKLEPLRTQAFQLNYAKAADMVTQLTMSSQGGS 398 Query: 294 DEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 G + + D + ++ +TN L +T + E++ ++A LD+ QV++EA Sbjct: 399 STSGYSNR----FLSDRGSAISEPRTNQLFVTDTSAKLEEVRQLLATLDVPVRQVMIEAR 454 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 IVE +D G +LGV+ + G + + ++ Sbjct: 455 IVEARDTFGRSLGVRLGGGSRTGGSAVGGTYDNVAGPTGGSGMSPFVSLPASLSGVSTVG 514 Query: 414 AYNGMAAGFFNGDW-GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT 472 ++ + + L+A+ ++ + I+++P ++T D A G + P + Sbjct: 515 SFALSIFNSNASRFLSLELSAMEADGQGKIVSSPRLITADQTKALIEQGTEYPY-----S 569 Query: 473 TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQ 532 + N T+ K KL+VTPQ+ ++L+++ S S+ G +T+ I+ Sbjct: 570 VTAPNGATTIAFKKAVLKLEVTPQITPEGNIILDLDVNKDSRGESTT--QGVAIDTKHIK 627 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 VL++ G TVV+GG+ + Q +K+P+LGD+P+VG LF+ + E KR ++VFI P Sbjct: 628 TQVLIENGGTVVIGGIFEMEETNQENKIPVLGDVPVVGNLFKNRTKESTKREMLVFITPK 687 Query: 593 IIRDDDVYR 601 +I D R Sbjct: 688 VITDRGPVR 696 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 72/237 (30%), Gaps = 19/237 (8%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 + E+ NF N ++R ++++ I+ +V G +++R + Sbjct: 267 LTQGPAYSGEKLSLNFQNIEVRSLLQVIADFTNFNIVTSDTVTGALTLRL-KDVPWDQAL 325 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 Q I+D G + + + + + + L T+ L Sbjct: 326 QI---IMDAKGLGMRKSGTVLWIAPKDEIDERTKKDYEAALAIQKLEPLRTQAFQLNYAK 382 Query: 137 ARDLAPLLRQMMDA------------GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 A D+ L G+ + +N L +T ++ + ++ +++ + Sbjct: 383 AADMVTQLTMSSQGGSSTSGYSNRFLSDRGSAISEPRTNQLFVTDTSAKLEEVRQLLATL 442 Query: 185 DVIGTEKQQIIHLEYASAED-LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 DV + I A D L + + VA S + Sbjct: 443 DVPVRQVM--IEARIVEARDTFGRSLGVRLGGGSRTGGSAVGGTYDNVAGPTGGSGM 497 >UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=Chromobacterium group RepID=Q7NZU2_CHRVO Length = 697 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 104/526 (19%), Positives = 199/526 (37%), Gaps = 44/526 (8%) Query: 101 VRSANVKTSPGMIADSSRPGVGDELVTRI------VPLENVPARDLAPLLRQMMDAGSVG 154 + ++ D + + +LV R+ P+ V A +L +R + Sbjct: 180 TPVDIRRDGANLVVDIAGASLPPQLVRRVDVTDFGTPVAKVDAANLGGNIRVTVIPQGDW 239 Query: 155 NVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH----------------LE 198 Y+ L++ R + + G + L Sbjct: 240 EYSSYQTDGKLVVEVRRPALETAGGAAGKPQYKGDKLSLNFQNIEVRTVLQVIAEFTGLN 299 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR--QRITSLLK 256 +++ + + + + + +L +K + +R ++I P + Sbjct: 300 VVTSDSVTGNITLRLKDVPWDQALDLILQSKGLDQRRNGNIIQIAPRDELLARDKQVQEA 359 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITAD 316 + E + + L+Y A + +VL G N S + ++ D Sbjct: 360 RQQLATLEPLRSETFVLRYRSAEDFKKVLDGD---------NNSGKKESLLSERGSVLID 410 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA 376 +TN+L++ + +K+ VI + DI QVL+EA IVE D +LG++ + Sbjct: 411 PKTNTLIVNDIGTAIDKIRDVITKTDIPVKQVLIEARIVEATDNWERDLGIKLTYDRMDP 470 Query: 377 QQFTNTGLPIFNAAQGVADYKK------NGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + + N P + + + + G+ Sbjct: 471 KGIISGNPLGTNVNNVTNLNNNQPYVIQTTPAGVNLPIATPYGTLSALYNVGHSVILGLE 530 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 L A+ + +K I+++P ++T D + AS G ++P S + + +V K + Sbjct: 531 LQAMQAEDKGRIISSPRVMTADRQEASIEQGTEIPYQEASSSGA-----TSVSFKKAVLR 585 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 L V PQ+ + V+++I S + P+ +T I VLV+ G TVVLGG+ Sbjct: 586 LNVKPQITPDNHVIMDITVNKDSANFEKTVNGTPSLSTEKIITQVLVENGGTVVLGGIYQ 645 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 + ++KVP LGDIPL+G LFR + + L++FI P +I D Sbjct: 646 QQLNDVINKVPFLGDIPLLGALFRSSQKIDKRSELLIFITPKVIND 691 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 14/211 (6%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 L A + ++ NF N ++R ++++ + G ++ SV G I++R Sbjct: 258 ALETAGGAAGKPQYKGDKLSLNFQNIEVRTVLQVIAEFTGLNVVTSDSVTGNITLRL-KD 316 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 + IL G N R + + + + L + Sbjct: 317 VPWDQALDL---ILQSKGLDQRRNGNIIQIAPRDELLARDKQVQEARQQLATLEPLRSET 373 Query: 130 VPLENVPARDLAPLL-------RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 L A D +L ++ G+V+ +N LI+ + I+K+ +VI Sbjct: 374 FVLRYRSAEDFKKVLDGDNNSGKKESLLSERGSVLIDPKTNTLIVNDIGTAIDKIRDVIT 433 Query: 183 RVDVIGTE---KQQIIHLEYASAEDLAEILN 210 + D+ + + +I+ DL L Sbjct: 434 KTDIPVKQVLIEARIVEATDNWERDLGIKLT 464 >UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobacillus RepID=B5EP42_ACIF5 Length = 784 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 103/528 (19%), Positives = 195/528 (36%), Gaps = 63/528 (11%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE----VIKRVDV 186 P++ V + L R + Y+ ++ + +D Sbjct: 249 PVQYVDSYPLGRSTRLVFAIHGPYEYSAYQLGQRTLIDVHPKAAEAVDNPNAGARLSMDF 308 Query: 187 IGTEKQQIIHL-------EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 + + + + ++ L+ + + +L ++ +A K ++ Sbjct: 309 QNISVRDALQVIADFTHQNIVVSNNVTGSLSIRLKNEPWEQAFQVILQSQGLAVKHIGNI 368 Query: 240 IISGPEKARQRITSLLKSLD--VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG 297 + P D + E T + ++YAKA+ + +L G + + G Sbjct: 369 LWVAPASQITSQEEAQLKADASKRKLEPLETELIRIRYAKASEIASLLQGFDQNKEPGGG 428 Query: 298 ---------------------NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLAT 336 N+ +S ++ +TNSL++ + Sbjct: 429 ETGNEMNPAQNAALASALGIPNSSLIGNSLLGPRGSVAVVTRTNSLLVRDTPQDIANIKH 488 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQ-----QFTNTGLPIFNAAQ 391 +IA++D QVL+EA IV+V +LGV W + TG + Q Sbjct: 489 LIAKIDRPVPQVLIEARIVQVTTSAAQSLGVNWGGTYTSGGGGGIVNLSGTGATGVTSTQ 548 Query: 392 GVA-----------------DYKKNGGITSANPAWDMFSAYNGMAAGFFNGD--WGVLLT 432 G A T+ M A G A G G+ + L Sbjct: 549 GGAYPMSGTTTTTGTGFTTPALVNLVPSTAGTALASMNPASLGFALGTAAGNRILNLQLQ 608 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLK 492 AL ++N+ I+++P ++T DN+ A GQ++P + + + V K L Sbjct: 609 ALQADNRAKIISSPKVLTQDNEKAVIEQGQEIPYQQATSSGA-----TAVSFKKAVLSLD 663 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDF 552 VTP ++ + L+++ + + G NT+ ++ +LV G+TVV+GG+ D Sbjct: 664 VTPHISPNGKITLDVDARNDQPNYAQAMPSGIPINTQQVKTKLLVNNGQTVVIGGIYTDS 723 Query: 553 SKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 + + + VPLL DIPL+G LF+ AK L+VF+ P ++ + Sbjct: 724 TTQNETGVPLLRDIPLLGWLFKSHINSVAKTELLVFLTPKVVGGESPG 771 Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 77/222 (34%), Gaps = 44/222 (19%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + +F N +R ++++ + I++ +V G++S+R + ++ +Q IL Sbjct: 300 AGARLSMDFQNISVRDALQVIADFTHQNIVVSNNVTGSLSIRLKNE-PWEQAFQV---IL 355 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G +V + N S + + + L T ++ + A ++A L Sbjct: 356 QSQGLAVKHIGNILWVAPASQITSQEEAQLKADASKRKLEPLETELIRIRYAKASEIASL 415 Query: 144 LRQMMDA-------------------------------------GSVGNVVHYEPSNVLI 166 L+ G G+V +N L+ Sbjct: 416 LQGFDQNKEPGGGETGNEMNPAQNAALASALGIPNSSLIGNSLLGPRGSVAVVTRTNSLL 475 Query: 167 LTGRASTINKLIEVIKRVDVIGTE---KQQIIHLEYASAEDL 205 + I + +I ++D + + +I+ + ++A+ L Sbjct: 476 VRDTPQDIANIKHLIAKIDRPVPQVLIEARIVQVTTSAAQSL 517 >UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Methylococcus capsulatus RepID=Q609V4_METCA Length = 751 Score = 318 bits (814), Expect = 5e-85, Method: Composition-based stats. Identities = 130/720 (18%), Positives = 249/720 (34%), Gaps = 122/720 (16%) Query: 20 AGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 + +Y NF++AD+ + + I+G L ++ P V G +S+++ ++ E Sbjct: 46 TSPRKEGKYTLNFDDADLSEVTKVILGDTLKVNYVLSPKVTGKVSLQTTRPLTEDEMIPT 105 Query: 79 FLSILDLY----------------------------GYSVITLDNGFLKVVRSANVKTSP 110 ++L + G ++ + Sbjct: 106 LETLLRMNGAALIREGGMYKIEPDAQAAISASGPGVGLGMMEPGYQLRVIPLRYISAAEM 165 Query: 111 GMIADSSRPGVG-----------------------------------DELVTRIVPLENV 135 + + P + + P++N Sbjct: 166 QKVLEPIMPPKAVLRMDETRNLVMVAGTAEELGGVMEAVQIFDVDYMRGMSVALYPVKNA 225 Query: 136 PARDLAPLLRQMMDAGSVG------NVVHYEPSNVLILTGRA-STINKLIEVIKRVDVI- 187 +A L +++ G G ++ E N ++ ++++ + I+R+D Sbjct: 226 DVPTIADELTKVLGLGGKGAMGNVLRILPIERLNAILAVAPEMHLLHEVQDWIERLDRYN 285 Query: 188 --GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPE 245 T + ++ A +LA L + G+ + S Sbjct: 286 TTRTGNVHVYRCQHVDAGELAHTLGGIFGGGAGRQGPSLAPGLTGMDVGSGISSAFGSAS 345 Query: 246 KARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKD----------- 294 G + + + + + TG Sbjct: 346 ATAGGFGGSSAGYGGSGGSFGGSGSSFGSSGSSGSSMGSTTGSMGTSGSSGGLGRSGSGG 405 Query: 295 -------------------EKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLA 335 + S + +N + AD N+L++ A +++ Sbjct: 406 LGGSGGGLGTSGGSFGGARSGAGGQGASMTQLGNNARVVADPANNALIVIAKPQDWKEIE 465 Query: 336 TVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVAD 395 VI LD+ QVL++A IVE+ N L G++W + + + + L Sbjct: 466 AVIKALDVLPLQVLIDATIVEISLKNDLQYGLKWLISSGSSTEALGSPLAALVKDFINGA 525 Query: 396 YKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKL 455 +GG + A G+ VLL LA N +++++PS++ L+N+ Sbjct: 526 ASASGGFS--------------YALIANGGNVKVLLNLLAQENLVNVISSPSLMVLNNQQ 571 Query: 456 ASFNVGQDVPVLSGSQTTS--GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS 513 A NVG VPVL+G+ ++ G FN +++ G L++ P+VN G V LEI Q +S+ Sbjct: 572 AKINVGDQVPVLTGTTASATIGTTQFNQFQQQQSGVTLQIRPRVNSGGLVSLEIFQAIST 631 Query: 514 VDSSSNSTLGPTFN--TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 + TF R IQ+ V V G+T+ LGGL+ D E + +P L IP++G Sbjct: 632 PSPVEVGSGQKTFQFANREIQSVVAVPNGQTLALGGLISDKRSETQTGLPYLNQIPMIGW 691 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED 631 +F T + + L+V I P ++ S+S E + + D + A+ S Sbjct: 692 MFGSTEIKPERTELVVLITPRVVEKKGDINSISNEFRRKLTNLYRGEPDAQPAAVEPSTP 751 >UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTT2_9GAMM Length = 721 Score = 318 bits (814), Expect = 6e-85, Method: Composition-based stats. Identities = 120/581 (20%), Positives = 236/581 (40%), Gaps = 51/581 (8%) Query: 63 SVRSNDTFSQQEYYQFFLSIL-----DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSS 117 ++ S +++ S+ + G V+ L + + ++ + Sbjct: 150 TLSSGAPSTEESGSNTIESVDFRRGEEGQGLVVVELGSAS---TPVNVAQEGSKVVTEFV 206 Query: 118 RPGVGDELVTRI------VPLENVPARDLAPLLRQMMDAGSVGNVVHY---EPSNVLILT 168 V ++LV R+ P + + L +R + + + L + Sbjct: 207 GASVAEDLVQRLDVLDFATPAKYIDIAQLDDGVRIVTTPTDSNYEHIAYQSDRTFTLEVK 266 Query: 169 G-RASTINKLIE----------VIKRVDVIGTEKQQIIH----LEYASAEDLAEILNQLI 213 + + + D+ Q+I L ++ ++ L + Sbjct: 267 PITKEELERQARDKFGFTGERLSLNFQDIEVRSVLQLIADFTGLNVVVSDSVSGSLTLRL 326 Query: 214 SESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVY 271 + +L K + +++ ++++ P E A+Q +L V+E + + Sbjct: 327 KNVPWDQALEIILKTKGLDKRKSGNVLLIAPAEEIAQQEKLALEAKQQVQELAPLQSEFF 386 Query: 272 YLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQ 331 + +AKA ++ ++ G SE + + SS + T D +TN+L++T V Sbjct: 387 EVNFAKAEQILNLIKGKSEDGEG-QSEGDSKSSGLLSERGTATVDARTNTLMVTDTAVVM 445 Query: 332 EKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG------AQQFTNTGLP 385 E++ +++ RLDI QVL+E+ IV D LG ++ + F + Sbjct: 446 EQIRSMLQRLDIPVKQVLIESRIVIASDDFDKQLGSRFGVNRIDPLPVGEGAVFGGSDTF 505 Query: 386 IFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD---WGVLLTALASNNKNDI 442 Q D N + N + S+ A + L+AL + K +I Sbjct: 506 NLQGRQSGGDLNINSRPMNFNFPANAGSSTGQFAFALPTSSGNLLELELSALQAEGKGEI 565 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDA 502 ++TP ++T + K A G ++P L + + + TV K L TPQ+ D Sbjct: 566 ISTPRVITANQKEAFIEQGVEIPYLEAASSGA-----VTVAFKKAVLSLTATPQITPDDR 620 Query: 503 VLLEIEQEVSSVDS--SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 ++L++ + +V P+ +TR ++ VLVK GETVVLGG+ + + + V+K+ Sbjct: 621 IILDLNVKKDNVGEIFGEGEIQVPSIDTREVETQVLVKNGETVVLGGIFEHETLDSVTKI 680 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 P LGDIP +G+LFR + +KR +++F+ P I+RD + Sbjct: 681 PFLGDIPGIGRLFRREIKQNSKREILIFVTPKIVRDSVEFN 721 Score = 98.6 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 63/183 (34%), Gaps = 19/183 (10%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+ NF + ++R ++++ G +++ SV G++++R + + IL Sbjct: 284 TGERLSLNFQDIEVRSVLQLIADFTGLNVVVSDSVSGSLTLRL-KNVPWDQALEI---IL 339 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G N L + + + L + + A + L Sbjct: 340 KTKGLDKRKSGNVLLIAPAEEIAQQEKLALEAKQQVQELAPLQSEFFEVNFAKAEQILNL 399 Query: 144 LRQMMDAG---------------SVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 ++ + G G +N L++T A + ++ +++R+D+ Sbjct: 400 IKGKSEDGEGQSEGDSKSSGLLSERGTATVDARTNTLMVTDTAVVMEQIRSMLQRLDIPV 459 Query: 189 TEK 191 + Sbjct: 460 KQV 462 >UniRef50_A4A016 General secretion pathway protein D (Precursor) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A016_9PLAN Length = 1199 Score = 317 bits (813), Expect = 6e-85, Method: Composition-based stats. Identities = 126/607 (20%), Positives = 237/607 (39%), Gaps = 85/607 (14%) Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 + N + ++ +I P L ++ L N A DLA +L+ + Sbjct: 474 TADYRSNALIVQASPRDMAEVEYLIRQIDVPAAESTLELKVFELRNSLAEDLATVLQAAI 533 Query: 149 DAGSV-----------------------------------------GNVVHYEPSNVLIL 167 + SN L++ Sbjct: 534 SGTPAAGTGGQQQGGAAAAQVRAAMLSFMTLDSREGQLLKSGILTDAQITADTRSNALVV 593 Query: 168 TGRASTINKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAEILNQLISESHGK------ 219 +++ + +I+R+D + ++ + A LA +L L G Sbjct: 594 RAPKDSMDLIGALIQRLDSQPSAESQIKVFTIVNGDATQLATMLETLFGLDEGTTQGQQP 653 Query: 220 -----SQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLK 274 L+ + D RTNS+I SGP + + ++L LD ++ ++ V LK Sbjct: 654 FAIGAGGDNTLVPIRFSVDSRTNSIIASGPASSLAVVEAILLRLDQDDVQQRQMLVVRLK 713 Query: 275 YAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT--NSLVITADQSVQE 332 + A + E LT + + + +SS + +T NSL+ITA + Sbjct: 714 NSNALLVAESLTELLQTESQLQQIDPTLTSSFQQVAREVIVVPETFSNSLIITATPRYFK 773 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG 392 ++ ++ LD R V ++ +I +V+ G LG ++ ++ + + Sbjct: 774 QIVKIVEELDARPPMVSIQVLIADVRLGKIEELGFEFGLQDSLLFDRSTVSSGQLDPGYN 833 Query: 393 VADYKKN-----------------GGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 + G + Y G + VL+ AL Sbjct: 834 FNNAALGNSSSAASLATASAVGSQGLSDLGLGRTNPALGYGGFVFSAASESVNVLIRALQ 893 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTP 495 +N+ ++LA P ++T+DN+ A VGQ VP ++ +Q T+ V N++ + G L V P Sbjct: 894 QDNRMEVLARPHVMTMDNQPAFIQVGQRVPYITDTQVTNQGTV-NSITLENTGVILNVIP 952 Query: 496 QVNEGDAVLLEIEQEVS-----------SVDSSSNSTLGPTFNTRTIQNAVLVKTGETVV 544 +++ V++ ++ E S S++ + + P NT+T V ++G+T+V Sbjct: 953 RISPDGMVVMYVQAERSEVGNEADGIPISINQNGDVIRAPRINTQTATTTVSARSGQTIV 1012 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 LGGL+ + +VPLLGDIP+VG LFRY S + + LM+ + PT++ D + Sbjct: 1013 LGGLIQKRTTVVSRRVPLLGDIPVVGSLFRYDSFDGDRSELMIILTPTVVDSDQDVERVR 1072 Query: 605 KEKYTRY 611 +++ +R Sbjct: 1073 EQEMSRM 1079 Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 121/341 (35%), Gaps = 47/341 (13%) Query: 30 ANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYS 89 + NA E + + ++ +++E ++ + Sbjct: 227 VSLRNAKREDVAEALAPLTD----------------TENSMAKREIFEALKKVAGKQQL- 269 Query: 90 VITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMD 149 + + + + PA + L D Sbjct: 270 -RWSGDMAAMIFQPGEAADGAAADDAQPAADQPAPQM--------QPAVEDQVTLGPDDD 320 Query: 150 AGSVGNVVH--YEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE---YASAED 204 AG +G V E +V+++ G + ++ +I ++ + E Q +I + +A++E Sbjct: 321 AGLIGPVQIEFLEGLDVIVVRGHRRDVERITRIINDIERLSAETQPVIEVRELLHANSEA 380 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE 264 +A + QL + I R N++++ G +++ I L++ LD Sbjct: 381 VAATILQLYEDLLQT----RYGQVSITPLGRPNAILLIGRQQSVDGILDLIEKLDQPVGP 436 Query: 265 EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVI 324 E RV+ LKY + + +T + + V TAD ++N+L++ Sbjct: 437 ERMLRVFQLKYLSSADAQTRVTEFYAEPVN------------LNPRVRSTADYRSNALIV 484 Query: 325 TADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 A ++ +I ++D+ A+ +E + E+++ +L Sbjct: 485 QASPRDMAEVEYLIRQIDVPAAESTLELKVFELRNSLAEDL 525 >UniRef50_Q21H82 Type II and III secretion system protein n=11 Tax=Gammaproteobacteria RepID=Q21H82_SACD2 Length = 727 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 106/545 (19%), Positives = 214/545 (39%), Gaps = 56/545 (10%) Query: 104 ANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ------MMDAGSVGNVV 157 + + G+ + + L ++ L+ + L++ + A + + Sbjct: 185 DIQEVATGIEVRFLDTELPESLRRKLDVLDFATPVSMVSTLKEGGAAVIHVTANGEYDYL 244 Query: 158 HYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH----------------LEYAS 201 Y+ N +++ + + ++ E R +G + L + Sbjct: 245 AYQADNKYVVSVKPLSKAEIEEKKSRFAYVGDKLSLNFQDIQVRSVLQLIADFTDLNLVA 304 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLD 259 ++ ++ + + + +L K + ++ S+++ P E A + + Sbjct: 305 SDTVSGSITLRLENVPWDQALDLVLKTKGLDKRQVGSVLMVAPAAEIAARERQEIETQKQ 364 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVL------TGVSEKLKDEKGNARKPSSSGAMDNVAI 313 ++E T ++YA A L + G+ R + S + Sbjct: 365 LQELAPLRTEYIRVRYANARELFNLFIDTSSGESGGAPGGSGSGSERNSTGSILSERGQA 424 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 DE+TNS+++T + + ++ R+DI QV++EA IV LGV+ A Sbjct: 425 IVDERTNSIILTDTEEKIDDFRRLVDRIDIPVRQVMIEARIVIANSDFRKELGVRMAGDA 484 Query: 374 VGAQQFTNTGLPIFNAAQGVADYKKNGG-------------------ITSANPAWDMFSA 414 V +T + G+ +G + S+ +F+ Sbjct: 485 VETSVSGDTKFEMTGRLTGLTAADGSGPEALFVDTDGDGVTDDERSLLDSSLVDLGVFNP 544 Query: 415 YNGMAAGFFNGDW--GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT 472 + ++ G+ L+AL ++ +I++ P ++T D + AS G ++P S + Sbjct: 545 AGAFTWNVISSNFLLGMELSALENSGYAEIVSQPKVITGDKQKASIESGTEIPYQEESAS 604 Query: 473 TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQ 532 T K KL+VTPQ+ + V++++ S+ S ++ P + ++ Sbjct: 605 GG-----TTTSFKEAVLKLEVTPQITPDNRVIMDLVINQDSISSIDANSGIPVIDITQLE 659 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 VLV GET+VLGG+ + +KVPLLGDIP VG+LFR KR +++FI P Sbjct: 660 TQVLVADGETIVLGGIYTTNTFTGETKVPLLGDIPFVGKLFRNDFKSEDKREILIFITPR 719 Query: 593 IIRDD 597 I+ + Sbjct: 720 IMASN 724 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 93/320 (29%), Gaps = 26/320 (8%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ NF + +R ++++ ++ +V G+I++R + + +L Sbjct: 275 GDKLSLNFQDIQVRSVLQLIADFTDLNLVASDTVSGSITLRLEN-VPWDQALDL---VLK 330 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G + + + + I + L T + + AR+L L Sbjct: 331 TKGLDKRQVGSVLMVAPAAEIAARERQEIETQKQLQELAPLRTEYIRVRYANARELFNLF 390 Query: 145 RQMMDA----------------------GSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 G + E +N +ILT I+ ++ Sbjct: 391 IDTSSGESGGAPGGSGSGSERNSTGSILSERGQAIVDERTNSIILTDTEEKIDDFRRLVD 450 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 R+D+ + + A+++ E+ ++ ++ S + S Sbjct: 451 RIDIPVRQVMIEARIVIANSDFRKELGVRMAGDAVETSVSGDTKFEMTGRLTGLTAADGS 510 Query: 243 GPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 GPE + D + + + V++ + Sbjct: 511 GPEALFVDTDGDGVTDDERSLLDSSLVDLGVFNPAGAFTWNVISSNFLLGMELSALENSG 570 Query: 303 SSSGAMDNVAITADEQTNSL 322 + IT D+Q S+ Sbjct: 571 YAEIVSQPKVITGDKQKASI 590 >UniRef50_A8FXQ1 Type II secretory pathway component PulD-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FXQ1_SHESH Length = 696 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 125/620 (20%), Positives = 241/620 (38%), Gaps = 58/620 (9%) Query: 22 HAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQG-TISVRSNDTFSQQEYYQFF 79 +++++ N+ ++ F+ + G L +I +V+ I++ S ++ ++ Sbjct: 103 FSDSKELSVTVNDMTMKSFLNYVFGDLLSIDYVIGKNVENSKITLNVASKISPRKLFEMT 162 Query: 80 LSILDLYGYSVITLDNGFLK--VVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPA 137 +L + D + + + V + G DS V ++VPL+ Sbjct: 163 TQVLQEQRVGIRLNDGIYYIYQLPQGGKVSVAMGFGRDSQSVPQNSGQVLQVVPLKYGVR 222 Query: 138 RDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--I 195 + L ++DA + + L + G I + +++I+ +DV + I I Sbjct: 223 ISVERTLNGLVDA----KITPDFEQSALFIQGTRDQIIRALDLIRLLDVPSNRGKYISLI 278 Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTN---SLIISGPEKARQRIT 252 + S +D +L+ + P + ++ + + S ++ R+ Sbjct: 279 SPVFISVDDFVSSTTELLKTEGIEIPKPGSNNGNLLFVPLSQLGSVAVFSAEQELLNRVE 338 Query: 253 SLLKSLDVEE-SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKG-------------- 297 +D E +Y K+A+A++L + ++ + Sbjct: 339 YWAAQIDKPSKGTERQYHIYTPKFARASDLGDSISPLISGESYSGNSKKTSSKDNKDSSV 398 Query: 298 --NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 N S+ + D + + D ++NSL+ A + + + ++ R+DI QVL+ I Sbjct: 399 VDNNSSMSTLTSNDKMTLVVDARSNSLIFHASGTEYQSILPLVQRMDILPKQVLLSVTIA 458 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 EV+ G ++A + T GL + G +K Sbjct: 459 EVKLTGEFKRGFEFALSSGNFSGSTKGGLGLDEIVGGTFSWKSGANEIIG---------- 508 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG 475 + N++ +IL+ PS++ D A+ NVG +PV SGS ++ Sbjct: 509 ----------------KFVEENSQVNILSKPSLLVRDGTEANINVGDKIPVSSGSSSSGS 552 Query: 476 DNVFN-TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS-SVDSSSNSTLGPTFNTRTIQN 533 V + + G KL VTP VN V++EI QE+S V PTF R+I+ Sbjct: 553 GEVVTENITYRETGIKLTVTPTVNAQGVVIMEINQEISNQVVGPVGKGGNPTFFDRSIKT 612 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 V+ TG+T++LGGL+ D + VP L IPL+G LF S K L++ + P I Sbjct: 613 EVVADTGQTILLGGLISDDTTNSNKGVPYLKSIPLIGALFESDSKNNTKTELVIMVTPKI 672 Query: 594 IRDDDVYRSLSKEKYTRYRQ 613 + + + + Sbjct: 673 VERSSQWNGILNQFQKALTN 692 >UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammaproteobacteria RepID=PILQ_PSEAE Length = 714 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 103/503 (20%), Positives = 202/503 (40%), Gaps = 47/503 (9%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV---------- 180 P++ V A + ++ + + + Y+ N L ++ + T Sbjct: 223 PVQFVNASAQSDRTSITIEPSGLYDYLVYQTDNRLTVSIKPMTTEDAERRKKDNFAYTGE 282 Query: 181 ---IKRVDVIGTEKQQIIH----LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVAD 233 + D+ Q+I L +++ + + + + +L K + Sbjct: 283 KLSLNFQDIDVRSVLQLIADFTDLNLVASDTVQGNITLRLQNVPWDQALDLVLKTKGLDK 342 Query: 234 KRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEK 291 ++ ++++ P E A + L + E + + YAKA ++ ++ V+ Sbjct: 343 RKLGNVLLVAPADEIAARERQELEAQKQIAELAPLRRELIQVNYAKAADIAKLFQSVTSD 402 Query: 292 LKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 E +IT D++TNS++ Q ++L ++++LDI QV++E Sbjct: 403 GGQEGKEGG---------RGSITVDDRTNSIIAYQPQERLDELRRIVSQLDIPVRQVMIE 453 Query: 352 AIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAA----------QGVADYKKNGG 401 A IVE G +LGV+W G + G Sbjct: 454 ARIVEANVGYDKSLGVRWGGAYHKGNWSGYGKDGNIGIKDEDGMNCGPIAGSCTFPTTGT 513 Query: 402 ITSANPAWDMFS--AYNGMAAGFFNGD--WGVLLTALASNNKNDILATPSIVTLDNKLAS 457 S +P D+ + A +G+ GF + + L+A+ +I++ P +VT D + A Sbjct: 514 SKSPSPFVDLGAKDATSGIGIGFITDNIILDLQLSAMEKTGNGEIVSQPKVVTSDKETAK 573 Query: 458 FNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS 517 G +VP S + + K L+VTPQ+ + +++E++ + D Sbjct: 574 ILKGSEVPYQEASSSGATSTS-----FKEAALSLEVTPQITPDNRIIVEVKVTKDAPDYQ 628 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 + P N + +LV GET+V+GG+ + + V KVP LG++P +G+LFR + Sbjct: 629 NMLNGVPPINKNEVNAKILVNDGETIVIGGVFSNEQSKSVEKVPFLGELPYLGRLFRRDT 688 Query: 578 TERAKRNLMVFIRPTIIRDDDVY 600 K L+VF+ P I+ + + Sbjct: 689 VTDRKNELLVFLTPRIMNNQAIA 711 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 66/188 (35%), Gaps = 11/188 (5%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 E+ NF + D+R ++++ ++ +VQG I++R + + Sbjct: 278 AYTGEKLSLNFQDIDVRSVLQLIADFTDLNLVASDTVQGNITLRLQN-VPWDQALDL--- 333 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 +L G L N L + + L ++ + A D+A Sbjct: 334 VLKTKGLDKRKLGNVLLVAPADEIAARERQELEAQKQIAELAPLRRELIQVNYAKAADIA 393 Query: 142 PLLRQMMD-------AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 L + + G G++ + +N +I +++L ++ ++D+ + Sbjct: 394 KLFQSVTSDGGQEGKEGGRGSITVDDRTNSIIAYQPQERLDELRRIVSQLDIPVRQVMIE 453 Query: 195 IHLEYASA 202 + A+ Sbjct: 454 ARIVEANV 461 >UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas intermedia K12 RepID=C7HZW7_THIIN Length = 752 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 104/444 (23%), Positives = 183/444 (41%), Gaps = 48/444 (10%) Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR--QRITS 253 HL ++ + L + + + +L AK + +++ +++ P + Sbjct: 313 HLNVVVSDSVTGNLTLRLKDVPWDQALQVILRAKGLGERKEGNVLWIAPRDEILAREKAD 372 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK------------GNARK 301 L + E + + L Y KA +V +LTG + + ++ Sbjct: 373 LEAKKSLSALEPVKSETFQLNYQKAATVVAMLTGAAGGAQSGTTATPSPVLLPGLSSSAA 432 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 P+S + AD +TN + +T S E++A +IA++D QV++EA IVE D Sbjct: 433 PTSRILSPRGTVLADPRTNQIFVTDIPSKLEEVAQLIAKIDKPVRQVMIEARIVEASDQF 492 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNG--------------------- 400 G +LGV+ + Q G + G G Sbjct: 493 GRSLGVKLGFLDARGIQGGVPGTNLVGGTYGTVSGDYLGVANQTNQPGSSAATLADSQFV 552 Query: 401 GITSANPAWDMFSAYNGMAAGFFNGD------WGVLLTALASNNKNDILATPSIVTLDNK 454 + + A + + + G + + L+A+ ++ K I+++P ++T D Sbjct: 553 NLPAFGLAGSLLAGAAPSSLGISLFNAAANRFINLELSAMEADGKGKIISSPRVITADLS 612 Query: 455 LASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV 514 A+ G ++P + + + V K L VTPQ+ V++ +E S Sbjct: 613 KATIEQGTEIPYQQATSSGA-----TAVTFKKAVLSLDVTPQITPDGNVIMNVEIHKDSP 667 Query: 515 DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFR 574 +S+ P+ NT T+ V V+ G TVVLGG+ + Q KVPLLGDIP++G LF+ Sbjct: 668 GASTAGV--PSINTNTVTTQVQVENGGTVVLGGIYTSQEQNQTDKVPLLGDIPVLGNLFK 725 Query: 575 YTSTERAKRNLMVFIRPTIIRDDD 598 S K LMVF+ P I+ + D Sbjct: 726 NNSKMYNKNELMVFLTPKIVTNAD 749 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 29/236 (12%), Positives = 67/236 (28%), Gaps = 33/236 (13%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ NF N D+R +++ +++ SV G +++R + Q IL Sbjct: 289 GQKLSLNFQNIDVRSLLQVFADFTHLNVVVSDSVTGNLTLRL-KDVPWDQALQV---ILR 344 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 G N R + + + + + L A + +L Sbjct: 345 AKGLGERKEGNVLWIAPRDEILAREKADLEAKKSLSALEPVKSETFQLNYQKAATVVAML 404 Query: 145 RQMMDAGS----------------------------VGNVVHYEPSNVLILTGRASTINK 176 G V+ +N + +T S + + Sbjct: 405 TGAAGGAQSGTTATPSPVLLPGLSSSAAPTSRILSPRGTVLADPRTNQIFVTDIPSKLEE 464 Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVA 232 + ++I ++D + + AS + L + + + +V Sbjct: 465 VAQLIAKIDKPVRQVMIEARIVEAS-DQFGRSLGVKLGFLDARGIQGGVPGTNLVG 519 >UniRef50_A3UDE6 General secretion proteinD n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UDE6_9RHOB Length = 658 Score = 315 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 131/604 (21%), Positives = 243/604 (40%), Gaps = 58/604 (9%) Query: 25 NEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + + NADI + +++G+HL I P VQG +++R D ++ + Q +L Sbjct: 69 GGPFSLVYRNADIATVINQVLGEHLQTDFTIAPDVQGQVTLRMQDVATRGDALQNLRDVL 128 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 S+I + V + + ++ G + ++ LE D+ L Sbjct: 129 APLSISLIDRGDFIAVVRGGGQQQGASVILTPGQAAPAGAGVA--MLSLEQAHPSDVETL 186 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG--TEKQQIIHLEYAS 201 L + V V+ + V+++ G A+ + E + +DV +I L+ + Sbjct: 187 LNALGTGAQV--VLADDQRQVIVVRGEAAALTAASEALALMDVDWLDEISTSLIPLQSTA 244 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 DL + + L+ ++ AL +A ++S + ++ LD Sbjct: 245 PSDLIQDIEPLLGPYASTIELIALDRISALA-------VLSARPNGIALVERWVRELDQP 297 Query: 262 ESEEGNTR--VYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM----------- 308 N R VY +++A LV + + + S Sbjct: 298 RRASSNPRQLVYTVRHADPEELVSAVRELLGYGQYGGVYGGNASGVNTGSASRSSQSSSQ 357 Query: 309 -----DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGL 363 D + I+A N ++ ++ ++ ++ LD RAQV +EA I+ V + Sbjct: 358 SYNDEDRLQISAVPSQNKIIARGPEARISEVRDLVELLDQPRAQVSIEAAIISVSLQDEF 417 Query: 364 NLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 GV W G A ++ + N S + G +A + Sbjct: 418 RFGVNW----------------------GAAPSEQIDVRFADNADGTAASVFPGFSATYL 455 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDN---VFN 480 N D L L + + ++++ P+++ L N+ A VG VPV++ S + + + N Sbjct: 456 NTDIEATLNMLDAVTEIEVISRPNVMALHNQQAELQVGDQVPVITQSAVSVTNPDAPIVN 515 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN-STLGPTFNTRTIQNAVLVKT 539 + G L VTP V G V ++I QEVSSV +S+ PT R I + +LV + Sbjct: 516 QTAYRDTGVILSVTPHVRAGGIVEIDITQEVSSVVQTSSSGIDSPTIRQRRITSTLLVPS 575 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 G++V LGGL+ VP+L ++P+VG++F S + L++ ++PT+I D Sbjct: 576 GQSVALGGLIATTRTTNERGVPVLRELPVVGRVFGSDSESVDRTELVILLKPTVITDPSQ 635 Query: 600 YRSL 603 + Sbjct: 636 PSDV 639 >UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Comamonadaceae RepID=A1TKM7_ACIAC Length = 810 Score = 315 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 159/615 (25%), Positives = 254/615 (41%), Gaps = 72/615 (11%) Query: 71 SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIV 130 + ++ + N L + A+ I + ++ ++ Sbjct: 159 NAANLVPVLRPLISPNNTINVNPGNNSLVITDYADNLQRIARIVAAMDVSNASDV--EVI 216 Query: 131 PLENVPARDLAPLLRQMM------------------------DAGSVGNVVHYEPSNVLI 166 PL N A +LAPL+ +++ D ++ SN LI Sbjct: 217 PLRNAVASELAPLVSRLVEGTGSTPGMATTATGTAGAIPGQSDTAYRTTLLPEPRSNSLI 276 Query: 167 LTG-RASTINKLIEVIKRVDVI-------GTEKQQIIHLEYASAEDLAEILNQLISESHG 218 + + + + ++ ++D + +++L+ A A LA L ++ S G Sbjct: 277 VRAANPARLALVRTLVDKLDQAPVVGSAAASGNIHVVYLKNADATKLATTLRAALAASMG 336 Query: 219 KSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKA 278 + +S+ + S S + + + Sbjct: 337 SNAGGGAVSSSGPSSSGGGSGTGSTGLSGSGLMQTGSSGGMGGGMGGSS----------- 385 Query: 279 TNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVI 338 + L G+ +S+ I AD TNSL+I+A + +L VI Sbjct: 386 ---------SAGGLGSSAGSLNSANSNQPSTGGQIQADPSTNSLIISAPEPQFRQLRAVI 436 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVAD--- 395 +LD RRAQVLVE++IVEV + G+QW T + + A G A+ Sbjct: 437 DQLDGRRAQVLVESLIVEVAANKVADFGIQWQGVMGNYGNGTIGVIGTNSTASGGANILN 496 Query: 396 ---YKKNGGITSANPAWDMFSAYNGMAAGF-------FNGDWGVLLTALASNNKNDILAT 445 +G ++ A A G N G L L + ++L+T Sbjct: 497 LALAAASGSVSGVTSALSASGARPGNGLNVAIAPRINGNYYLGALANFLENTGDANVLST 556 Query: 446 PSIVTLDNKLASFNVGQDVPVLSGSQTTSGD----NVFNTVERKTVGTKLKVTPQVNEGD 501 P+++TLDN+ A +G +VP ++GS S N F TVERK VG L+V PQ++E Sbjct: 557 PNLLTLDNEEAQIIIGNNVPFVTGSYANSTGSSTVNPFTTVERKDVGLMLRVRPQISENG 616 Query: 502 AVLLEIEQEVSSV-DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 V L + QEVS V D ++N+ GPT + R+I++ VLV G +VLGGLL+D KV Sbjct: 617 TVKLSLYQEVSQVNDGTANAVNGPTTSKRSIESTVLVNDGSVIVLGGLLEDRYSMGQDKV 676 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRID 620 PL+GD+P+VG LFR + R K NLMVF+RP +IRD +L ++Y R QQ Sbjct: 677 PLMGDLPVVGGLFRNENRRRQKTNLMVFLRPVVIRDTATSDALMMDRYEAIRALQQNIQP 736 Query: 621 GKSKALVGSEDLPVL 635 S + + PVL Sbjct: 737 APSTVMRAVSEAPVL 751 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 72/310 (23%), Positives = 125/310 (40%), Gaps = 28/310 (9%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 A + E NF ADI + G+ +++DP V+G +++ + Sbjct: 33 TATGAAPSSVRPGEPVTLNFAGADIEAVARTMATITGRNVVVDPRVKGQLTLVTERAVPP 92 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIA----DSSRPGVGDELVTR 128 +Q FL+ L L G++V+ KVV A+ K G + S G ++VT+ Sbjct: 93 AAAFQQFLAALRLQGFTVVESAG-LYKVVPEADAKLQSGSVTVTQGGSGSAPGGGQIVTQ 151 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 I L A +L P+LR ++ + NV +N L++T A + ++ ++ +DV Sbjct: 152 IFKLNFENAANLVPVLRPLISPNNTINV--NPGNNSLVITDYADNLQRIARIVAAMDVSN 209 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGK---------------SQMPALLSAKIVAD 233 ++I L A A +LA ++++L+ + Q ++ + Sbjct: 210 ASDVEVIPLRNAVASELAPLVSRLVEGTGSTPGMATTATGTAGAIPGQSDTAYRTTLLPE 269 Query: 234 KRTNSLIISGPEKA-RQRITSLLKSLDVEE-----SEEGNTRVYYLKYAKATNLVEVLTG 287 R+NSLI+ A + +L+ LD + GN V YLK A AT L L Sbjct: 270 PRSNSLIVRAANPARLALVRTLVDKLDQAPVVGSAAASGNIHVVYLKNADATKLATTLRA 329 Query: 288 VSEKLKDEKG 297 Sbjct: 330 ALAASMGSNA 339 Score = 43.1 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 46/137 (33%), Gaps = 5/137 (3%) Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEG 266 + ++ ++ PA + +A R + + + L G Sbjct: 76 PRVKGQLTLVTERAVPPAAAFQQFLAALRLQGFTVVESAGLYKVVPEADAKLQ-----SG 130 Query: 267 NTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITA 326 + V A +++T + + + N N I + NSLVIT Sbjct: 131 SVTVTQGGSGSAPGGGQIVTQIFKLNFENAANLVPVLRPLISPNNTINVNPGNNSLVITD 190 Query: 327 DQSVQEKLATVIARLDI 343 +++A ++A +D+ Sbjct: 191 YADNLQRIARIVAAMDV 207 >UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Proteobacteria RepID=Q489N5_COLP3 Length = 706 Score = 314 bits (804), Expect = 8e-84, Method: Composition-based stats. Identities = 99/407 (24%), Positives = 176/407 (43%), Gaps = 32/407 (7%) Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLD 259 ++ + + + + +L K + + ++++ P E A + SL Sbjct: 318 SDTVTGNITLRLDGVPWDQALSIILKVKGLDKRMQGNILMVAPSDELAAREAQSLQAKQQ 377 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 VEE + + YAKA E++ +S D +++ DE+T Sbjct: 378 VEELATLYSEYLQINYAKAAEFSELIKNE--------------DTSILSDRGSVSVDERT 423 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 N+L+I E + +I LD+ QV++EA +V V+D LG++W N + Sbjct: 424 NTLLIRDTAKSIEDIKRMITILDVPVRQVVIEARMVTVKDNMNEELGIRWGVTNTDGEFA 483 Query: 380 TNTGLPIFNAAQGVADYKKNG---------GITSANPAWDMFSAYNGMAAGFFNGD-WGV 429 T+ + ++A G G G+ P + A NG + Sbjct: 484 TSGSIEGASSANGTRGVTTPGVGQVPTIGDGLNVNLPVANAAGTIAFQVARLANGTILDL 543 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 L+AL NK +++A+P I T + K A G ++P + + + + K Sbjct: 544 ELSALEKENKGEVIASPRITTANQKEAYIEQGVEIPYQEAASSGATAT-----QFKKAVL 598 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLL 549 L VTP + D ++L++ ++ ++ P +T+ I VLV GET+VLGG+ Sbjct: 599 SLTVTPHITPDDKIILDLVVTQDTISDITSG-FAPAIDTQRIGTQVLVNNGETIVLGGIY 657 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 VSK+P+LGDIP +G LFR +S K+ L++F+ P I+ + Sbjct: 658 QQAIISTVSKIPILGDIPYLGWLFRNSSQLNEKKELLIFVTPRIVTE 704 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 35/292 (11%), Positives = 92/292 (31%), Gaps = 8/292 (2%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 +F + +R ++I+ + ++I +V G I++R + + IL Sbjct: 287 TGRSISLSFQDIPVRTVLQIIADYNEFNLIISDTVTGNITLRLDG-VPWDQALSI---IL 342 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 + G N + + + L + + + A + + L Sbjct: 343 KVKGLDKRMQGNILMVAPSDELAAREAQSLQAKQQVEELATLYSEYLQINYAKAAEFSEL 402 Query: 144 LR--QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 ++ G+V E +N L++ A +I + +I +DV + +I + Sbjct: 403 IKNEDTSILSDRGSVSVDERTNTLLIRDTAKSIEDIKRMITILDVPVRQV--VIEARMVT 460 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 +D + A + A + ++ P + ++++ Sbjct: 461 VKDNMNEELGIRWGVTNTDGEFATSGSIEGASSANGTRGVTTPGVGQVPTIGDGLNVNLP 520 Query: 262 ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAI 313 + T + + ++++ EK + A ++ I Sbjct: 521 VANAAGTIAFQVARLANGTILDLELSALEKENKGEVIASPRITTANQKEAYI 572 >UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Comamonadaceae RepID=A1TUQ3_ACIAC Length = 829 Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats. Identities = 138/620 (22%), Positives = 241/620 (38%), Gaps = 76/620 (12%) Query: 89 SVITLDN--GFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 +++ +DN L + + + + ++ + + + PL+ +++ LR Sbjct: 223 AIVRVDNLRNVLVMSGTRTQAEAWMDLVNTFDVDLLKGMSVGVFPLKYASVKEVEAALRV 282 Query: 147 MMDAG---------------------------------------SVGNVVHYEPSNV-LI 166 + G ++ E N L+ Sbjct: 283 VSGGGGSAPGAVPGTPAGAAAAAAAGANQANAAPVTLGEGNPLFGALRIMPIERINSILV 342 Query: 167 LTGRASTINKLIEVIKRVDVIGTEKQQ----IIHLEYASAEDLAEILNQLISESHGKS-- 220 +T RA+ +++ I+++D + I H++ +A+ LA +L+ + G S Sbjct: 343 VTPRAAYLDEARRWIEKLDQPSDNGAEPQLFIYHVQNGNAKHLAGVLSGIFGGQAGGSVA 402 Query: 221 --------QMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYY 272 + S ++ G G Sbjct: 403 NSGVAPGLGGTSSNSYGSSGFGNSSFNNGFGSSGFGNSPFGGGFGSSGGFGSSGGFGSSG 462 Query: 273 LKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQE 332 ++ + + + ++ + S + V + ADE NS+++ ++ Sbjct: 463 GFGGGFSSGSGFGSFQGNRGNQNQAGTQQGAVSANLGGVRLMADELNNSVLVWGTKANYM 522 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG 392 K+ + RLD+ QVL+EA IVEV + L G+QWA N G G + N Sbjct: 523 KIEATLKRLDLPPTQVLIEASIVEVTLDDTLQYGLQWAFNNAGPSNLNGAGQLLTNGPSD 582 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLD 452 + + S+ A G V+L ALA+ ++++PS++ LD Sbjct: 583 KTPIGSSIPTPT--------SSGFSYALSNSLGSVRVVLNALATKRLLKVISSPSLMVLD 634 Query: 453 NKLASFNVGQDVPVLSGS---QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQ 509 N A +VG PV +GS + G++V +T++ + G L VTP VN G+ V ++I+Q Sbjct: 635 NHTAMMSVGNQQPVKTGSLITSVSGGNSVADTIQYRDTGVSLAVTPSVNAGNLVTMQIDQ 694 Query: 510 EVSSV--DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 V+ D+S + +L P F R I + V V++GE +VLGGL+ D S S VPLL DIP Sbjct: 695 AVTDAVADNSGSISLQPVFQQRQITSKVAVRSGEAIVLGGLIRDTSNSSKSGVPLLQDIP 754 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALV 627 LVG LF + L+V I P ++R D R +S E R + Q L Sbjct: 755 LVGSLFSNNGKTGNRTELLVVITPKVVRTDIDIREVSDELRDRLKGLQI-------IELK 807 Query: 628 GSEDLPVLDENTFNSHAPAP 647 + P T + P P Sbjct: 808 ENGRTPAAPSGTSTTIQPLP 827 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 113/329 (34%), Gaps = 39/329 (11%) Query: 19 CAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 +F A + + V ++G ++ P + GT+++ + + + Sbjct: 88 PVPALTGAPMTFSFEEAPVAEVVRTVLGDIAKANYVLHPPLNGTVTLATRNPIPPDQAMF 147 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIAD-SSRPGVGDELVTRIVPLENVP 136 S L G +I G V R ++ G + S + I+PL+ + Sbjct: 148 LLESALQANGLGMIRDARGTYHVGRPDALRAIGGTLRQFRSGEPLPPGNGAVIIPLQYIG 207 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--I 194 A ++A +LR M+ ++ V NVL+++G + ++++ DV + + Sbjct: 208 AAEMASILRPMVTPDAI--VRVDNLRNVLVMSGTRTQAEAWMDLVNTFDVDLLKGMSVGV 265 Query: 195 IHLEYASAEDLAEILN------------------------------QLISESHGKSQMPA 224 L+YAS +++ L + P Sbjct: 266 FPLKYASVKEVEAALRVVSGGGGSAPGAVPGTPAGAAAAAAAGANQANAAPVTLGEGNPL 325 Query: 225 LLSAKIVADKRTNSLIISGPEKA-RQRITSLLKSLDVEE--SEEGNTRVYYLKYAKATNL 281 + +I+ +R NS+++ P A ++ LD E +Y+++ A +L Sbjct: 326 FGALRIMPIERINSILVVTPRAAYLDEARRWIEKLDQPSDNGAEPQLFIYHVQNGNAKHL 385 Query: 282 VEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 VL+G+ + + Sbjct: 386 AGVLSGIFGGQAGGSVANSGVAPGLGGTS 414 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 100/329 (30%), Gaps = 61/329 (18%) Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV----IG 188 +P LL + A +G + + + GR + + +++ Sbjct: 138 NPIPPDQAMFLLESALQANGLGMIRDARGTYHV---GRPDALRAIGGTLRQFRSGEPLPP 194 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 II L+Y A ++A IL +++ A + D N L++SG Sbjct: 195 GNGAVIIPLQYIGAAEMASILRPMVTP-----------DAIVRVDNLRNVLVMSGTRTQA 243 Query: 249 QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP------ 302 + L+ + DV+ + + V+ LKYA + L VS G Sbjct: 244 EAWMDLVNTFDVDLLKGMSVGVFPLKYASVKEVEAALRVVSGGGGSAPGAVPGTPAGAAA 303 Query: 303 -----------------SSSGAMDNVAITADEQTNSLVITADQSVQ-EKLATVIARLDIR 344 + + I E+ NS+++ ++ ++ I +LD Sbjct: 304 AAAAGANQANAAPVTLGEGNPLFGALRIMPIERINSILVVTPRAAYLDEARRWIEKLDQP 363 Query: 345 -----RAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKN 399 Q+ + VQ N A + + + Sbjct: 364 SDNGAEPQLFI--------------YHVQNGNAKHLAGVLSGIFGGQAGGSVANSGVAPG 409 Query: 400 GGITSANPAWDMFSAYNGMAAGFFNGDWG 428 G TS+N + GF + +G Sbjct: 410 LGGTSSNSYGSSGFGNSSFNNGFGSSGFG 438 >UniRef50_D1N173 Type II and III secretion system protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N173_9BACT Length = 794 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 134/676 (19%), Positives = 266/676 (39%), Gaps = 80/676 (11%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 FN++ + + LG D ++ T+++ N +++E ++ F L L Sbjct: 130 DVVLVFNSSPLVDTLPAFADILGFNFTADSDLKSTVTLNLNSRMTRRELWEAFDQTLQLA 189 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 G I L+++ +A + + + +R G E+++ L NV A+D L+ Sbjct: 190 GAGAIRNG-QLLEIMPAAKLPGRSA-LRNRNRLTSGAEVIS--YSLFNVTAKDAVAQLKP 245 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ--IIHLEYASAED 204 + G V SNV++L R I KL EV++ +D G + ++H Sbjct: 246 FLSPA--GVAVEATRSNVIVLCDRLENIPKLKEVLELLDQPGRQNWPRAVVHCRNVKPSA 303 Query: 205 LAEILNQLISESH-----GKSQMPALLSAKIVADKRTNSLIISG-PEKARQRITSLLKSL 258 +A+ L++++ + + ++ R L ++ E+A + + + + L Sbjct: 304 IAQELSEVLPVLGFPVVLATDKTEVPGAVQLTGVDRIQILAVTAATEEAIKEVRNWISIL 363 Query: 259 DVEESE-EGNTRVYYLKYAKATNLVEVLTGVSEKLKD----------------------- 294 D +S + VY + + KA L + L+ + Sbjct: 364 DNADSSTQERMYVYKVTHDKAEYLAQALSVIFSTQGTSLTVDTSFNRSNSTSEQTRTSQI 423 Query: 295 ----------------------EKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQE 332 + S+ V + AD N LVI Sbjct: 424 TTQQTRNQNTNTNSQNRYSTNNQSNTELDLVSNVFNTPVRLFADGVQNRLVIRTTPRTYA 483 Query: 333 KLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG 392 + ++ RLD+ AQVL + +IVE+ + G+Q+ N + G +TG + G Sbjct: 484 MIKALLDRLDVVPAQVLFQILIVEITLTDSNEFGLQFNNVSYGGGTGVSTGTNFNDI--G 541 Query: 393 VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLD 452 + D G + + L ALA + ++++P ++ Sbjct: 542 MNDSSSEGFKLGIFDKDNPEENFG-------------YLRALAGRDNIKVISSPQLLVTS 588 Query: 453 NKLASFNVGQDVPVLS---GSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQ 509 N A VGQDVP+L+ + ++ NV + + G L + PQV D + ++IEQ Sbjct: 589 NTTAKIQVGQDVPILTQDLTTSDSATGNVTRSYTYEETGIILSLIPQVTSTDLISMQIEQ 648 Query: 510 EVSSV--DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 +VS ++ +++T P +TR + A+ + G+T+V+GG++ + + +++ VP++ DIP Sbjct: 649 KVSEAIKNTITSATDTPVISTRVLNTAMTIANGKTMVIGGMIQEKNNDRLQSVPIIADIP 708 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALV 627 + + F T+ + L+V + I+ + + + + D + K Sbjct: 709 FLRRFFGNTNQSVERTELLVLVTGYIVNGKSPVEEMIRRYNSSVKALSLFESDMEKKDKE 768 Query: 628 GSEDLPVLDENTFNSH 643 +E L V E Sbjct: 769 DAERLKVKVEAVPKQP 784 >UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRB5_PSYIN Length = 689 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 120/538 (22%), Positives = 224/538 (41%), Gaps = 64/538 (11%) Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 F L+ G ++ LDN + V + + +IA+ + DEL+ + ++ A Sbjct: 188 FKRGLEGQGKLLVYLDNSSIAV---DIRRRNNQLIAEFQSTYIPDELLYIMDVVDFATAV 244 Query: 139 DLAPLLRQMMDAGSVGNVVH-----YEPSNVLILTGRASTINKLIEV--------IKRVD 185 + ++ + ++ Y+ + L + + + E + D Sbjct: 245 EKVETFKEDGKTRLIFDIKDQYNYRYDQLDTLFMIEISEKLQDQKESAYQGKAISLNFQD 304 Query: 186 VIGTEKQQIIH----LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 + Q+I + ++ + + + + + +L K + ++++ Sbjct: 305 IPVRTVLQLIADFNGFNLVITDSVSGNITLRLDDVPWEQALDIILKVKGLGKSLDGNVLM 364 Query: 242 SGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA 299 P E A ++ L V + + YAK ++ +L+ Sbjct: 365 IAPAVELAAKKREQLESENAVANLAPLYSEFIQVNYAKVADISAMLSS------------ 412 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 +S + A++ D +TN+L++ +V + + +I LDI QV++EA +V V D Sbjct: 413 --DKTSLLSERGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQVVIEARMVTVDD 470 Query: 360 GNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMA 419 LGV+W + + + + + PA D Sbjct: 471 SVSEELGVKWGMTSTSSSTVDSLNVNL--------------------PATDAAGTIAFKL 510 Query: 420 AGFFNGD-WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV 478 A F NGD + L+AL S NK +I+A+P I T + + A G ++P + + + + Sbjct: 511 AKFSNGDILDLELSALESENKAEIIASPRITTANQQTAYIEQGTEIPYVESASSGA---- 566 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG--PTFNTRTIQNAVL 536 +V K L VTPQ+ + V+L++E +V + ++ G +T+ I VL Sbjct: 567 -TSVAFKKAVLSLTVTPQITPDNKVILDLEITQDTVGETVSAGTGEAVAIDTQKIGTQVL 625 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 V GET+VLGG+ + VSKVPLLGDIP +G LFR T+ E K L++F+ P I+ Sbjct: 626 VGNGETLVLGGIYQQRNSIAVSKVPLLGDIPYLGALFRSTNEENTKSELLIFVTPRIV 683 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 100/312 (32%), Gaps = 16/312 (5%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 + + NF + +R ++++ G ++I SV G I++R +D ++ Sbjct: 290 ESAYQGKAISLNFQDIPVRTVLQLIADFNGFNLVITDSVSGNITLRLDD-VPWEQALDI- 347 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 IL + G N + + + L + + + D Sbjct: 348 --ILKVKGLGKSLDGNVLMIAPAVELAAKKREQLESENAVANLAPLYSEFIQVNYAKVAD 405 Query: 140 LAPLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHL 197 ++ +L + G V +N L++ A+ I+ + ++I+ +D+ + +I Sbjct: 406 ISAMLSSDKTSLLSERGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQV--VIEA 463 Query: 198 EYASAEDLAE-ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 + +D L + S L+ + A ++ + + I L Sbjct: 464 RMVTVDDSVSEELGVKWGMTSTSSSTVDSLNVNLPATDAAGTIAFKLAKFSNGDILDLEL 523 Query: 257 SLDVEESEEGNTRVYYLKYAKAT----NLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 S E++ + A + V A K + Sbjct: 524 SALESENKAEIIASPRITTANQQTAYIEQGTEIPYVESASSGATSVAFKKAVLSLTVTPQ 583 Query: 313 ITADEQTNSLVI 324 IT D N +++ Sbjct: 584 ITPD---NKVIL 592 >UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteobacteria RepID=A1TYV8_MARAV Length = 704 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 88/412 (21%), Positives = 172/412 (41%), Gaps = 33/412 (8%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ + + + + +L K + ++ ++++ P E A + L Sbjct: 312 LNLVASDTVGGSITLRLQNVPWDQALDLILKTKGLDKRQIGNVLLVAPAEEIAAREKLEL 371 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 + + E + + YAKA ++V ++ E ++ Sbjct: 372 ETNKQIAELAPVRLDIIQVNYAKAADVVALIQADEE---------------LISSRGFVS 416 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 +D +TN++ + E++ +++ D+ QV +EA IV Q +LGV+W Sbjct: 417 SDARTNTISVRETAEKLEEIRRLVSTWDVPVRQVSIEARIVRAQTNVAEDLGVRWGGAAY 476 Query: 375 GAQQFTNTGLPIF---------NAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG 425 + A+ G G + ++ + G + Sbjct: 477 NVDGDDVITVGGSLGTLQEARDAASGGSNTISFPGALGVDLGVSGDGASSFAIGWGSDDF 536 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 + L+AL S+ + ++++ P +VT D + AS G+++P + + + +E K Sbjct: 537 LVDLELSALESDGRAEVVSQPRVVTADRQTASIKSGEEIPYQEATSSGA-----TNIEFK 591 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 L+VTPQ+ D +++++ S + P+ NT + VLV GETVVL Sbjct: 592 EAVLSLEVTPQITPDDKIIMDLVVNQDSRGEVTAG--IPSINTNEVTTQVLVANGETVVL 649 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 GG+ Q +K P LGDIP +G+LF+ T + L++FI P II++D Sbjct: 650 GGIFQSEVATQTTKTPFLGDIPYLGRLFKRTEHIDERSELLIFITPKIIKND 701 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 31/250 (12%), Positives = 79/250 (31%), Gaps = 5/250 (2%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 E+ NF + ++R ++++ G ++ +V G+I++R + + Sbjct: 284 PYTGEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVGGSITLRLQN-VPWDQALDL--- 339 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 IL G + N L + + + + I+ + A D+ Sbjct: 340 ILKTKGLDKRQIGNVLLVAPAEEIAAREKLELETNKQIAELAPVRLDIIQVNYAKAADVV 399 Query: 142 PLLRQMMD-AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYA 200 L++ + S G V +N + + A + ++ ++ DV + + A Sbjct: 400 ALIQADEELISSRGFVSSDARTNTISVRETAEKLEEIRRLVSTWDVPVRQVSIEARIVRA 459 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV 260 ++ + ++ + + + SG +L L V Sbjct: 460 QTNVAEDLGVRWGGAAYNVDGDDVITVGGSLGTLQEARDAASGGSNTISFPGALGVDLGV 519 Query: 261 EESEEGNTRV 270 + + Sbjct: 520 SGDGASSFAI 529 >UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular organisms RepID=B1Y305_LEPCP Length = 726 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 116/607 (19%), Positives = 230/607 (37%), Gaps = 73/607 (12%) Query: 59 QGTISVRSNDTFSQQEYYQFFLS--------------ILDLYGYSVITLDNGFLKV---- 100 QG + + + S + + G + V Sbjct: 125 QGKVLLVILEPVPVAAALATAPSEPVHFSESQNNQPERIRDIDFRRGRDGAGRVVVDLPS 184 Query: 101 --VRSANVKTSPGMIADSSRPGVGDELVTRI------VPLENVPARDLAPLLRQMMDAGS 152 V + ++ + R V + LV R+ P+ ++ +R +++ Sbjct: 185 TQVGVDIKQQGQNLVIEFLRSNVPESLVRRLDVTDFGTPVHSISTTQNGDRVRMVVEPRG 244 Query: 153 VGNVVHYEPSNVLILTGRASTINKLIEVIK--------RVDVIGTEKQQIIHL------- 197 Y+ N +L R ++ ++ E + ++ + Sbjct: 245 SWEHSAYQTDNQFVLEVRPQKVDPQKLTQGPGFTGDKLSLNFQSIEVRSLLQVIADFTNF 304 Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLL 255 +++ + + + + + ++ AK + K+ +++ P E A + L Sbjct: 305 NIVTSDSVTGNVTLRLKDVPWDQALDIIMQAKSLGVKKAGNVLWIAPKDELAAKEKQELE 364 Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITA 315 + + E T+ + L Y KA +V+ LTG ++ + + Sbjct: 365 ARKQIADLEPLRTQSFQLNYTKAEEVVKSLTG--QQQGSAGTGQGGNVTRILSQRGSAAY 422 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 + +TN L ++ S E++A +IA++D+ QV++EA IVE +D G LGV+ ++ Sbjct: 423 ESRTNQLFVSDLPSKLEEVAQMIAKIDVPVRQVMIEARIVEAEDSFGRTLGVKLGATDLR 482 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITS------------------ANPAWDMFSAYNG 417 G N + + G T+ AN + + Sbjct: 483 GINGGVPGWGGNNTRIALGGNYSSIGDTTLQQATGSIYANSQFVNLPANTSSLGGATAAT 542 Query: 418 MAAGFFNGD----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 A F + L+AL + K ++++P +VT D A G ++P + Sbjct: 543 FALSLFGASSNRFLNLELSALEAEGKGKLVSSPRVVTADQVKALIEQGTELPYQT----G 598 Query: 474 SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQN 533 ++ + KL+VTPQ+ ++++++ SV + G NT+ ++ Sbjct: 599 GNQQTAPSIAFRKATLKLEVTPQITPEGNIIMDVDVNKDSVGQQT--LAGFAINTKHVKT 656 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 VLV+ G TVV+GG+ + E V+KVP+LGDIP +G LFR + K L+VF+ P + Sbjct: 657 QVLVENGGTVVIGGIFETTETESVNKVPVLGDIPFLGVLFRNKTRVANKTELLVFLTPKV 716 Query: 594 IRDDDVY 600 I D + Sbjct: 717 ITDRNTA 723 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 90/329 (27%), Gaps = 24/329 (7%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 + ++ NF + ++R ++++ I+ SV G +++R + Sbjct: 271 LTQGPGFTGDKLSLNFQSIEVRSLLQVIADFTNFNIVTSDSVTGNVTLRL-KDVPWDQAL 329 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 I+ V N + + + + L T+ L Sbjct: 330 DI---IMQAKSLGVKKAGNVLWIAPKDELAAKEKQELEARKQIADLEPLRTQSFQLNYTK 386 Query: 137 ARDLAPLL----RQMMDAGSVGNVVHY----------EPSNVLILTGRASTINKLIEVIK 182 A ++ L + G GNV +N L ++ S + ++ ++I Sbjct: 387 AEEVVKSLTGQQQGSAGTGQGGNVTRILSQRGSAAYESRTNQLFVSDLPSKLEEVAQMIA 446 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 ++DV + I AED + + + + + R Sbjct: 447 KIDVPVRQVM--IEARIVEAEDSFGRTLGVKLGATDLRGINGGVPGWGGNNTRIALGGNY 504 Query: 243 GPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEK---LKDEKGNA 299 + + L A A L G S + Sbjct: 505 SSIGDTTLQQATGSIYANSQFVNLPANTSSLGGATAATFALSLFGASSNRFLNLELSALE 564 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQ 328 + +TAD Q +L+ + Sbjct: 565 AEGKGKLVSSPRVVTAD-QVKALIEQGTE 592 >UniRef50_A3UH04 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UH04_9RHOB Length = 622 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 132/643 (20%), Positives = 269/643 (41%), Gaps = 49/643 (7%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGT---ISVRSNDTFS 71 ++ + A + F++ ++G+ L + P V +++RS + S Sbjct: 1 MLTDSLALRGPSINATLPAQPLPSFLDTVLGEILEIPYALGPGVSDRDDIVTLRSVEDMS 60 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL--VTRI 129 Q ++ F + + YG +V T DN + V RS P +I +R V +L V + Sbjct: 61 PQTFFTLFETAIGEYGLAVETHDNMVVVVERSDLRSAMPQIIQARARSSVASQLRPVIQF 120 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 V + A + ++RQ+ + N + LTG + +N +I+++D Sbjct: 121 VEFDYADAAVIEAVVRQVFPDTQGLGIQTRRDINSMTLTGLSDIVNSANRLIEQLDRPRF 180 Query: 190 EKQQIIHL--EYASAEDLAEILNQLISESHGKSQMPALLS--AKIVADKRTNSLIISG-P 244 + L A +LA+ L ++S + + ++ ++TN +++ Sbjct: 181 AGATAVALSPRNWEAAELAQTLTDILSLEGFQIGLGGRQPRPLTLLPLEQTNQILVFAKN 240 Query: 245 EKARQRITSLLKSLDVEESEEGNTR--VYYLKYAKATNLVEVLTGVSE-----KLKDEKG 297 E + + + + L+ E TR VY ++ A L ++ V + Sbjct: 241 EDSLGHLIATARRLEEAAEHEDVTRSYVYQVRNTDAEELANIIRTVLGETGRSSSTGAET 300 Query: 298 NARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEV 357 A + + + + + + D N L+ T +++ + LA ++ +LD ++VLVE I EV Sbjct: 301 TAGETAGASSAVSSRLAVDTFGNRLIFTGNRNEYDNLARLLGQLDTPVSEVLVEVTIAEV 360 Query: 358 QDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG 417 + LGV++ +G T + ++ G++ G Sbjct: 361 IFSDTTRLGVEFFLNTLGGDVQVGTSDGLGLSSGGLSAIVDAG----------------- 403 Query: 418 MAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS-----QT 472 + A ++N+ ++L+TP IV + A VG DVP+++ Q Sbjct: 404 --------QLDIEAAARSTNSNINVLSTPRIVARSGESAEVQVGTDVPIITSQRAANTQD 455 Query: 473 TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-PTFNTRTI 531 + ++ +V ++ G L V P+V + + L I QEVSS D + N + P + R + Sbjct: 456 SGSTDILQSVSYRSTGVLLTVEPRVYSNNRIDLTIMQEVSSADDNPNQAIASPIISNRRM 515 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 +++ ++ G+T VLGGL+ + + VPL+ DIP++G +F+ + +R L+V + P Sbjct: 516 TSSITLQDGQTAVLGGLMSETVNRGSTGVPLVQDIPVLGNIFKTETFSNDQRVLLVLVTP 575 Query: 592 TIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPV 634 I+ D + + + R+ + S+ + + Sbjct: 576 YILNDRNDRQEIVDVFQGEVNDAFVSRLGPGATFFRRSQPIQL 618 >UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteobacteria RepID=A0KN30_AERHH Length = 733 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 122/571 (21%), Positives = 216/571 (37%), Gaps = 64/571 (11%) Query: 49 GKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKT 108 G QG V +++ + + ++L + + + D L V+ Sbjct: 204 GVDFRRGKDGQGEFLVTLDNSSAAVDVSSRGQTVLAKFHGTRVPDDLLNLINVQDFATPV 263 Query: 109 SPGMIADSSRPGVGDELVTRIVPLENVPARDL----------APLLRQMMDAGSVGNVVH 158 S + + + V A + A +Q N Sbjct: 264 SQVEVFRQGNDTLFELSVNGQFDYRYDQADKMFIVEVKKRTAATAGKQYQGKPISLNFQD 323 Query: 159 YEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHG 218 VL L + +N + + ++ + + Sbjct: 324 IPVRTVLQLIADFNNLNLVTT-----------------------DSVSGNITLRLDGVPW 360 Query: 219 KSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYA 276 + + +L + + + N++++ P E A + L V + T + YA Sbjct: 361 EQALDIILKVRGLDKRLDNNILLVAPAEEIAAREKQQLESRNQVADLAPLYTEYLQINYA 420 Query: 277 KATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLAT 336 KA+ + +L+ S KL KG ++ DE+TN LV+ V + Sbjct: 421 KASEVAALLSSESTKLLSSKGA--------------VSVDERTNVLVVKDTADVISNIKR 466 Query: 337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADY 396 ++ LDI QV++EA +V + DG LGV+W + +G N + G + Sbjct: 467 MLDILDIPVKQVVIEARMVTIDDGFDEALGVRWGVTKNDGHGNSTSGTIEGNDSSGNNNG 526 Query: 397 KKNGGITSANPAWDMFSAYNGMAAGF--------FNGDWGVLLTALASNNKNDILATPSI 448 + ++ A + L+AL +K +I+A+P + Sbjct: 527 GSTITRPGVDDRLNVNLPVTNAAGTLAFQVARLADGTLLDLELSALEKESKAEIIASPRV 586 Query: 449 VTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIE 508 T + K A G ++P + S + + +V K LKVTPQ+ + V+L++ Sbjct: 587 TTANQKPALIEQGTEIPYVESSSSGA-----TSVTFKKAVLSLKVTPQITPDNRVILDLT 641 Query: 509 QEVSSVDSSSNSTLG--PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 + + + G + N ++I VLV GET+VLGG+ K VSKVPLLGDI Sbjct: 642 VTQDTKGETVPTGTGDAVSINAQSITTQVLVNNGETLVLGGIYQQTIKSDVSKVPLLGDI 701 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 P +G LFR T++E KR L++F+ P I+ D Sbjct: 702 PGLGVLFRKTTSENKKRELLIFVTPKIVTDA 732 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 8/227 (3%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 + + NF + +R ++++ ++ SV G I++R + ++ Sbjct: 304 TAATAGKQYQGKPISLNFQDIPVRTVLQLIADFNNLNLVTTDSVSGNITLRLDG-VPWEQ 362 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 IL + G +N L + ++ L T + + Sbjct: 363 ALDI---ILKVRGLDKRLDNNILLVAPAEEIAAREKQQLESRNQVADLAPLYTEYLQINY 419 Query: 135 VPARDLAPLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 A ++A LL S G V E +NVL++ A I+ + ++ +D+ + Sbjct: 420 AKASEVAALLSSESTKLLSSKGAVSVDERTNVLVVKDTADVISNIKRMLDILDIPVKQV- 478 Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 +I + +D + + S I + + + Sbjct: 479 -VIEARMVTIDDGFDEALGVRWGVTKNDGHGNSTSGTIEGNDSSGNN 524 >UniRef50_B8D2D9 Type II and III secretion system protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2D9_HALOH Length = 881 Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 127/697 (18%), Positives = 257/697 (36%), Gaps = 140/697 (20%) Query: 1 MKGLNKITCCLLAALLM---PCAGHAENE------QYGANFNNADIRQFVEIVGQHLGKT 51 MK K+ L+ L++ P A N + NF A+I+ + + + Sbjct: 1 MKTHKKLLAGLMLYLIILSIPGFAFASNGIDSHPVKVDMNFEEAEIQDVLTAIASLVNIN 60 Query: 52 ILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPG 111 +++D SV G I+V+ ++ S +E ++ + G + ++ + Sbjct: 61 LVVDSSVSGEITVKLDN-MSFKEALD---YVVKVSGLDYVWKNDTVIVASSERLKSFYGE 116 Query: 112 MIADS-------------------------------------------------SRPGVG 122 + ++ R V Sbjct: 117 ELVETVSLKYSDPVHIYQLIKVFYPELKVQVDSNNLKLLMSGKRKTILAARNLIDRIDVP 176 Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 D L+T + + A L LR++ + +N+L++ G + + +E++ Sbjct: 177 DSLITATYVAKFINADSLENHLRRIYP---GLVLSSDRDNNILLIYGSKRKVREALELVN 233 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 R+D+ E I+ + + E + L + + ++ ++ LIIS Sbjct: 234 RIDLPRKEATFIVDINKGDVTRIEETVLNLFPDLVVEG------------NEASHKLIIS 281 Query: 243 GPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 G ++ + L+K +D+ EE +T V + Y NL+ V+ G+ Sbjct: 282 GDKEEALKARDLIKEIDI--GEEIDTEVVRVDYGNLDNLISVIQGLF------------- 326 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 ++ + ++ ++I + S +++ +++ LDI R QV++EA E+ Sbjct: 327 ------PDIRLQSNPLKKEIIIKGNTSEVQEIVSLVNSLDIPRRQVIIEARFEEISANKI 380 Query: 363 LNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF 422 G++ Sbjct: 381 SEFGMR-----------------------------------PNLSEIQFIFDEATRELKS 405 Query: 423 FNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVF--- 479 N W L L + ++LA P ++TL+ + A +G VPV + S + Sbjct: 406 MNITWPEYLRFLEEEGQANMLANPRLLTLNGENARLLIGDKVPVKIEETSGSSEESEGES 465 Query: 480 --NTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD-SSSNSTLGPTFNTRTIQNAVL 536 + E VG L+ TP + E +++++ EVSS+ P TR + + Sbjct: 466 NAVSYEYIDVGISLEFTPWITEDGYIIMDVAPEVSSLGSPMGGGESIPPIKTREARTKIR 525 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 +K G+T +GGL+ + E ++KVPLLGDIPL+G LFR + T++ K +++FI P I+++ Sbjct: 526 LKDGQTFAIGGLIREDELESIAKVPLLGDIPLLGTLFRRSQTDKVKTEVVIFITPHIVKE 585 Query: 597 D-DVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 ++ + + + + +S D Sbjct: 586 SFGDITTVDQSREKVLSNKTDEPSKKESTPDKEVVDT 622 >UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Tax=Legionella RepID=Q5X6H2_LEGPA Length = 698 Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats. Identities = 83/424 (19%), Positives = 178/424 (41%), Gaps = 28/424 (6%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS--L 254 + ++ + + +++ + +L+ + + +R ++++ + + ++ L Sbjct: 295 INMVVSDKVQGDITLRLNDIPWDQALDIILTTQGLDKRRKGNVMLIDTKASMDKMEEEQL 354 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 +E+ E + + + YAKA ++ ++ +S D I+ Sbjct: 355 KSQQTIEKLEPIRSDLIQINYAKAADIAVLIKD--------------KQNSLLSDRGKIS 400 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 D +TN++ I + E++ +I +LDI QVL+EA IVEV ++G++W Sbjct: 401 VDARTNTIWIQDTGTKIEEVRELIKQLDIPVKQVLIEARIVEVTKDFSQDIGIRWGVSRP 460 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF------FNGDWG 428 T G A+ + + A + + G N Sbjct: 461 THLSGTLEGANELARGTAPANVVPLERRLNLDLAAAPLTGATPASVGIALAKLNDNILLD 520 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVG 488 + L+AL S + +++++P ++T + + A G+++P + + + V K Sbjct: 521 LELSALESEGRAELISSPRLITTNQQAAVIESGEEIPYQEATSSGA-----TAVAFKKAV 575 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGL 548 LKVTPQ+ +L++++ + P T+ IQ VLV G+T+VLGG+ Sbjct: 576 LSLKVTPQITPDGKILMDLQINQDTPSPQ-TFLGVPAIITKEIQTNVLVNNGQTIVLGGI 634 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKY 608 + ++++P G++P+VG LF L++FI P II + ++ + Sbjct: 635 YKQDKNKVINRIPFFGELPVVGILFSNRQITLKNEELLIFITPRIITNALSITTIEGREK 694 Query: 609 TRYR 612 Y+ Sbjct: 695 DVYK 698 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 78/187 (41%), Gaps = 9/187 (4%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 ++ NF N IR ++++ G +++ VQG I++R ND + IL Sbjct: 269 TGKRISLNFQNISIRAVLQLLADFTGINMVVSDKVQGDITLRLND-IPWDQALDI---IL 324 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G N L +++ K + + + + ++ + A D+A L Sbjct: 325 TTQGLDKRRKGNVMLIDTKASMDKMEEEQLKSQQTIEKLEPIRSDLIQINYAKAADIAVL 384 Query: 144 LRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQQIIHLE 198 ++ ++ G + +N + + + I ++ E+IK++D+ + + +I+ + Sbjct: 385 IKDKQNSLLSDRGKISVDARTNTIWIQDTGTKIEEVRELIKQLDIPVKQVLIEARIVEVT 444 Query: 199 YASAEDL 205 ++D+ Sbjct: 445 KDFSQDI 451 >UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisseriaceae RepID=C0DV38_EIKCO Length = 707 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 186/404 (46%), Gaps = 15/404 (3%) Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR--ITS 253 ++ +++ ++ + + + + ++ ++ + +R ++I P + ++ + + Sbjct: 311 NMNIVASDSVSGKMTLSLKDVPWDQALDLVMQSRGLESRRNGNIIRVAPAEEFRKIDVET 370 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAI 313 L + +EE +R + LKY ++L G + +++ + Sbjct: 371 LENAKRIEELGPLVSRTFQLKYKDVNEFRKILN---ISDTGSSGGSGNNNNTLLSSRGSA 427 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 D TN+L+I +Q+V ++ +I +LD+ QV++EA IVE DG LGV++ Sbjct: 428 VIDPATNTLIIKDNQNVIKEFERLIEQLDVPARQVMIEARIVEANDGFSRALGVKFGYNK 487 Query: 374 VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTA 433 +GL A N + + + + + +G G+ LTA Sbjct: 488 TSGSTRIGSGLGSGGANGNTFSIAPNVNLPAISATSSI-----TIVRALSSGALGLELTA 542 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 + N+ I+++P ++T D K A+ G+++P S + + K L V Sbjct: 543 MQEQNRGKIISSPRVLTQDRKEATIKAGREIPYQEASSSGATSTS-----FKEAVLGLTV 597 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 TPQ+ V+++I+ SVD + + P NT+ + +V+ G T++LGG+ ++ + Sbjct: 598 TPQITPDGNVIMDIKLNKDSVDENCSVLGTPCINTKELVTRAMVEDGGTIILGGIYEEEN 657 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 KVPLLGDIP+VG LFR T +K L++FI P I+ + Sbjct: 658 SNSQYKVPLLGDIPVVGNLFRGTRRNNSKNELLIFITPRIMGSE 701 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 77/245 (31%), Gaps = 20/245 (8%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 + ++ +F + D+R ++I+ + I+ SV G +++ + Sbjct: 284 NFTGKRVSLDFQDVDVRTILQILAKESNMNIVASDSVSGKMTLSL-KDVPWDQALDL--- 339 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 ++ G N K + ++ R LV+R L+ + Sbjct: 340 VMQSRGLESRRNGNIIRVAPAEEFRKIDVETLENAKRIEELGPLVSRTFQLKYKDVNEFR 399 Query: 142 PLLR-------------QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 +L S G+ V +N LI+ + I + +I+++DV Sbjct: 400 KILNISDTGSSGGSGNNNNTLLSSRGSAVIDPATNTLIIKDNQNVIKEFERLIEQLDVPA 459 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 + I A D + + K+ + + + + + P Sbjct: 460 RQVM--IEARIVEANDGFSRALGV-KFGYNKTSGSTRIGSGLGSGGANGNTFSIAPNVNL 516 Query: 249 QRITS 253 I++ Sbjct: 517 PAISA 521 >UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella RepID=A8GZ28_SHEPA Length = 688 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 103/408 (25%), Positives = 183/408 (44%), Gaps = 25/408 (6%) Query: 196 HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITS 253 + +++ + + + + + +L AK + + ++++ P E A + Sbjct: 299 NFNLVTSDTVEGDITLRLDDVPWDQALDLILQAKGLDKRIEGNILMVAPIEEIAIRESQE 358 Query: 254 LLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAI 313 L +V+E + + YAKA ++ +L G SS ++ Sbjct: 359 LKNMQEVKELAPLYSEYLQINYAKAVDIAALLKGE--------------DSSLLTSRGSV 404 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 DE+TN+L++ + E + +I LDI QVL+EA +V V+D +LGV+W + Sbjct: 405 AVDERTNTLLVKDTEETLENIHRLIEVLDIPIKQVLIEARMVTVKDDVSEDLGVRWGVTD 464 Query: 374 VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM--AAGFFNGDWGVLL 431 + T+ L + + PA A + L Sbjct: 465 QQGDKGTSGSLEGAGDIANGIVPSLSDRLNVNLPAAVANPTSIAFHVAKLADGTVLDLEL 524 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKL 491 +AL NK +I+A+P I T + K A G ++P + S + + TV K L Sbjct: 525 SALEQENKGEIIASPRITTSNQKAAFIEQGVEIPYVEASSSGA-----TTVTFKKAVLSL 579 Query: 492 KVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG--PTFNTRTIQNAVLVKTGETVVLGGLL 549 +VTPQ+ + V+L++E S + ++ G + +T+ I VLV GET+VLGG+ Sbjct: 580 RVTPQITPDNRVILDLEITQDSQGKTVDTPTGQAVSIDTQRIGTQVLVDHGETIVLGGIY 639 Query: 550 DDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 +VSKVP+LGDIP +G +FR TS + ++ L++F+ P I+ + Sbjct: 640 QQQLISRVSKVPILGDIPYLGFMFRSTSDKNERQELLIFVTPKIVSEA 687 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 92/286 (32%), Gaps = 15/286 (5%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 + NF N +R ++I+ + ++ +V+G I++R +D + Sbjct: 272 KYDGRSLSLNFQNISVRTVLQIIADYNNFNLVTSDTVEGDITLRLDD-VPWDQALDL--- 327 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 IL G N + + + L + + + A D+A Sbjct: 328 ILQAKGLDKRIEGNILMVAPIEEIAIRESQELKNMQEVKELAPLYSEYLQINYAKAVDIA 387 Query: 142 PLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY 199 LL+ + S G+V E +N L++ T+ + +I+ +D I ++ Sbjct: 388 ALLKGEDSSLLTSRGSVAVDERTNTLLVKDTEETLENIHRLIEVLD---------IPIKQ 438 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD 259 E + +SE G L +L Sbjct: 439 VLIEARMVTVKDDVSEDLGVRWGVTDQQGDKGTSGSLEGAGDIANGIVPSLSDRLNVNLP 498 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS 305 + + + K A T L L+ + ++ K E + + ++S Sbjct: 499 AAVANPTSIAFHVAKLADGTVLDLELSALEQENKGEIIASPRITTS 544 >UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fastidiosa RepID=B2I8B2_XYLF2 Length = 636 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 111/522 (21%), Positives = 203/522 (38%), Gaps = 43/522 (8%) Query: 102 RSANVKTSPGMIADSSRPGVGDELVTRIVPLE-------NVPARDLAPLLRQMMDAGSVG 154 + A + S +S GDE V IVP + + ++ ++ G G Sbjct: 137 KGAQLVLSTKGAFESLAYQTGDEYVVEIVPRKGEAAMGGAITPESVSKSAAKISAQGYSG 196 Query: 155 -----NVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEIL 209 N VL L S +N ++ V G ++I++ + A D+ Sbjct: 197 RPVTFNFQDVPVRTVLQLIADESNLN----IVASDTVQGNVTLRLINVPWDQALDIV--- 249 Query: 210 NQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL--LKSLDVEESEEGN 267 L AK + +R +I P++ + + +E E Sbjct: 250 ----------------LRAKGLDKRRDEKVIWVAPQQELAKYEQEKEDARIAIENREGLI 293 Query: 268 TRVYYLKYAKATNLVEVLT-GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITA 326 T + Y AT + + LT + + ADE+TN+L+I+ Sbjct: 294 TDYVQINYHSATVIFKALTEAKGMGGGGNGTPNNNSDDAFLSPRGRLVADERTNTLMISD 353 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPI 386 ++ T+I +D QVL+E IV D +LG ++ + Sbjct: 354 IPKKVAQMRTLIQHIDRPVDQVLIEGRIVIATDSFARDLGAKFGVGAASRFSDNTATIGS 413 Query: 387 FNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG--DWGVLLTALASNNKNDILA 444 A + + P S +A + + L+AL ++ ++++ Sbjct: 414 NVTAGSSTSATRGLNVDLGGPTNTTASVLPSLAYTLLGPKFNLDLELSALQQESRGEVIS 473 Query: 445 TPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVL 504 P IVT + + G+++ ++ + +G V+ K +L+VTP + + V Sbjct: 474 NPRIVTANQREGYIKQGKEIGYVTITGGVAGGQATPNVQFKEAVLELRVTPTITNDNRVF 533 Query: 505 LEIEQEVSSVDS---SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVP 561 L + + +D +N PT N R I AVLV G+TVV+GG+ + + VSKVP Sbjct: 534 LNMTVKKDEIDQMITIANFGTVPTLNKREINTAVLVDDGQTVVIGGVYEFSDRNSVSKVP 593 Query: 562 LLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSL 603 LGD+P +G LF+ ++ K L++F+ P ++R + ++ Sbjct: 594 FLGDVPFLGNLFKKRGKDKQKAELLIFVTPKVLRVANATAAV 635 >UniRef50_B8IR79 General secretion pathway protein D n=2 Tax=Methylobacterium RepID=B8IR79_METNO Length = 784 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 140/707 (19%), Positives = 247/707 (34%), Gaps = 105/707 (14%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQ 73 L G Y NF ADI+ + ++ + LG + + + G I++ S ++ Sbjct: 91 PLEVGNGPGGEGSYRLNFERADIKDVLRTVLTETLGLSYSLGADISGQITISSPRPLTRA 150 Query: 74 EYYQFFLSILDL---------------------------------YGYSVITL------- 93 E S+L YG SV+ L Sbjct: 151 EMLGAIESVLASQGLALTRNGAGYLIAPTALGAGSVNFGAGAQAGYGVSVVPLRYVSAAV 210 Query: 94 -------------------DNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 + + + S + L Sbjct: 211 MSRLVSGFVTEADGVRFDISRNTIVLKGPGPKRQEAVSAILSLDADWMRGQSVSLFELRR 270 Query: 135 VPARDLAPLLRQMMDAGSVG------NVVHYEP-SNVLILTGRASTINKLIEVIKRVDVI 187 V + L Q+ D G G VL+L+ + I + I+++D + Sbjct: 271 VRPEAVVAELAQLFDTGENGAGSGLIQFKPVSRMRAVLVLSKNPTLIRRAETFIRKLDTM 330 Query: 188 GTEKQQ---IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 ++ + Y A +LA ++N L G ++ G Sbjct: 331 SEAAEENVFVYKARYRDARELARVVNGLFGNGQGGVGPAGPAGTGFAQNRAGAGSGAGGG 390 Query: 245 EKARQRITSLLKS---------------LDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 L L + G L+ A+ + + Sbjct: 391 LGGHGLSGGGLGGSGFGGGGLSAPGGSSLGAPGQQPGGNGTDLLRARFASAFGDAVPAAP 450 Query: 290 EKLKDEKGNAR----KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRR 345 N+ VAI+AD NS++ AD +K+ + RLD Sbjct: 451 ADAPGAGTNSAMIDLTTQPGARGRGVAISADPANNSVITYADGDTYKKVYAALRRLDATP 510 Query: 346 AQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSA 405 AQV V I EV+ + L GVQ+ + N G + T A Sbjct: 511 AQVAVNVTIAEVRLNDQLKYGVQYFLDSSRIGLGKNKGSFGL----------VSAAATGA 560 Query: 406 NPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP 465 + +N + G+ D V+++AL +L++PS+V L+N+ A+ VG VP Sbjct: 561 TNVLKPGAGFNFLVGGYSGPD--VVISALDGFTDVKVLSSPSLVVLENQPATLQVGDSVP 618 Query: 466 VLSGSQTT---SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL 522 + + + + + N VE + G L V P++ + DAV ++IEQE+S+V S+ TL Sbjct: 619 ITTRQAQSIDYANAPLINQVEFRDTGIILNVIPRIGQNDAVTMQIEQEISAVVGGSD-TL 677 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 PT + R + + + V G+TV+L GL+ D + + +P L +P +GQLF T + Sbjct: 678 TPTISKRRVASTISVANGQTVLLAGLISDKHQRERDGIPFLNRLPQIGQLFSSTDNGAER 737 Query: 583 RNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGS 629 L+VFIRP ++R+ + ++++ + +R + + Sbjct: 738 TELVVFIRPVVVRNGRDAQRVAEDYRGQLLDAGVRRGARAAAPVHKP 784 >UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legionella longbeachae D-4968 RepID=D1RGV5_LEGLO Length = 701 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 87/426 (20%), Positives = 178/426 (41%), Gaps = 27/426 (6%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRI--TSL 254 + +++ + + ++ + +L + +A ++ ++++ +K+ + L Sbjct: 295 INIVASDRVQGNITLRLNNIPWDQALDIILKTQGLAQRQNGNVMVIDTQKSFNDMEEQQL 354 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 ++ E + + + YAKAT+L ++ +S D ++ Sbjct: 355 KSQHKIQRLEPVRSELIQINYAKATDLAILIKDR--------------QNSLLSDKGKVS 400 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 D +TN++ I S +++ +I LD+ QVL+EA IVEV +LG++W Sbjct: 401 VDTRTNTIWIQDSGSRVDEVRKLIKELDVPVKQVLIEARIVEVTKDFAQDLGIRWGVSKP 460 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGF------FNGDWG 428 T G AD + + + N G N Sbjct: 461 QHLSGTLAGANQLAQGVAPADVTPFTDRLNLDLVAAPLTKANPATVGIALAQLGDNILLD 520 Query: 429 VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVG 488 + L+AL S +++++P ++T + + A + GQ++P + + + V K Sbjct: 521 LELSALESEGLAELISSPRLITANQQPALIDSGQEIPYQQSTSSGA-----TAVAFKKAV 575 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGL 548 LKV PQ+ + +L++++ + P T+ IQ VLV G+T+VLGG+ Sbjct: 576 LSLKVIPQITPDNKILMDLKINQDLALPNQTYNGVPAIATKEIQTNVLVSNGQTIVLGGI 635 Query: 549 LDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKY 608 + +++VP G +P+VG LF+ T L++FI P II + ++ Sbjct: 636 YQQDKSKTITRVPFFGQLPVVGNLFKNTQIGVHNDELLIFITPKIITNSLSITTIEGRNP 695 Query: 609 TRYRQE 614 R+ ++ Sbjct: 696 VRFDEK 701 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 111/306 (36%), Gaps = 19/306 (6%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + NF N IR ++++ G I+ VQG I++R N+ + IL Sbjct: 269 SGRRISLNFQNISIRSVLQLLADFTGINIVASDRVQGNITLRLNN-IPWDQALDI---IL 324 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G + N + + + + + + + + ++ + A DLA L Sbjct: 325 KTQGLAQRQNGNVMVIDTQKSFNDMEEQQLKSQHKIQRLEPVRSELIQINYAKATDLAIL 384 Query: 144 LRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQQIIHLE 198 ++ ++ G V +N + + S ++++ ++IK +DV + + +I+ + Sbjct: 385 IKDRQNSLLSDKGKVSVDTRTNTIWIQDSGSRVDEVRKLIKELDVPVKQVLIEARIVEVT 444 Query: 199 YASAEDL-----AEILNQLISESHGKSQMPALLSAKIVAD--KRTNSLIISGPEKARQRI 251 A+DL L G +Q+ ++ V R N +++ P Sbjct: 445 KDFAQDLGIRWGVSKPQHLSGTLAGANQLAQGVAPADVTPFTDRLNLDLVAAPLTKANPA 504 Query: 252 TSLLKSLDVEESEEGNTRVYYLKYAKATNLVE---VLTGVSEKLKDEKGNARKPSSSGAM 308 T + + ++ + + L+ L+ ++T + + G S + Sbjct: 505 TVGIALAQLGDNILLDLELSALESEGLAELISSPRLITANQQPALIDSGQEIPYQQSTSS 564 Query: 309 DNVAIT 314 A+ Sbjct: 565 GATAVA 570 >UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderiales RepID=A1VK17_POLNA Length = 712 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 110/482 (22%), Positives = 209/482 (43%), Gaps = 40/482 (8%) Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTIN--KLIEVIKRVDVIGTEKQQIIHLE--- 198 +R +++ Y+ N +L RA ++ KL + I + Q I + Sbjct: 247 VRMVVEPTGQWEQSAYQSDNQFVLEVRAQKVDPGKLTQGIGFNGEKLSLNFQNIEIRSLL 306 Query: 199 ----------YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EK 246 +++ + + + + + +L AK + ++T ++++ P E Sbjct: 307 QVIADFTNFNVVTSDTVTGSVTLRLKDVPWDQALDIILQAKGLGMRKTGNVLLIAPKDEL 366 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 A + L + ++ E T+ + + YAKA+ + ++ G ++ Sbjct: 367 AAKDKQELEARVAIQNLEAVRTQSFQINYAKASEIAVQISA---------GGTGATTARI 417 Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 + ++ A+ +TN L +T S E++ IA+LDI QVL+EA IVE D G +LG Sbjct: 418 LSNRGSVIAEPRTNQLFVTDIPSRLEQVQNFIAKLDIAVRQVLIEARIVEASDTFGRSLG 477 Query: 367 VQWANKNVGAQQF---TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF 423 V+ +GA NT + + ++ + +A + A F Sbjct: 478 VRLGGGTIGAAGALTRGNTNVSLGTNYGATVADTSGNFVSFPASTLGVANAASSFAVSIF 537 Query: 424 NGD----WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVF 479 N + L+AL ++ K I+++P +VT D A G + P + + + + Sbjct: 538 NASANRFLNLELSALEADGKGKIVSSPRVVTADQTKALIEQGTEFPYQTATSSGA----- 592 Query: 480 NTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKT 539 ++ + KL+VTPQ+ ++L+++ S ++ + + +T+ IQ VLV+ Sbjct: 593 TSLAFRKANLKLEVTPQITPEGNIILDLDVNKDSRGETTAAGI--AIDTKHIQTQVLVEN 650 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 G TVV+GG+ KVPLLGD+P +G LF+ K+ ++VFI P +I D Sbjct: 651 GGTVVIGGIFTLEETNNEVKVPLLGDVPYLGNLFKSRERTSRKQEMLVFITPKMITDRAS 710 Query: 600 YR 601 R Sbjct: 711 AR 712 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 95/312 (30%), Gaps = 26/312 (8%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+ NF N +IR ++++ ++ +V G++++R + IL Sbjct: 289 NGEKLSLNFQNIEIRSLLQVIADFTNFNVVTSDTVTGSVTLRL-KDVPWDQALDI---IL 344 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G + N L + + + + T+ + A ++A Sbjct: 345 QAKGLGMRKTGNVLLIAPKDELAAKDKQELEARVAIQNLEAVRTQSFQINYAKASEIAVQ 404 Query: 144 LRQMMDA-------GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 + + G+V+ +N L +T S + ++ I ++D+ +Q +I Sbjct: 405 ISAGGTGATTARILSNRGSVIAEPRTNQLFVTDIPSRLEQVQNFIAKLDI--AVRQVLIE 462 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 A D + AL TN ++ Sbjct: 463 ARIVEASDTFGRSLGVRLGGGTIGAAGALTRGNTNVSLGTNYGATVADTSG-NFVSFPAS 521 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITAD 316 +L V + + + A A + + E K +TAD Sbjct: 522 TLGVANAAS--SFAVSIFNASANRFLNLELSALEADGKGK---------IVSSPRVVTAD 570 Query: 317 EQTNSLVITADQ 328 QT +L+ + Sbjct: 571 -QTKALIEQGTE 581 >UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7W7_KANKD Length = 701 Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats. Identities = 120/567 (21%), Positives = 226/567 (39%), Gaps = 54/567 (9%) Query: 46 QHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY-----GYSVITLDNGFLKV 100 G + +G + V D + Q +++ + + + + Sbjct: 171 DISGIDFRRGVNGEGRVLVNLGDPNVSVDLRQEGRTVIADFMGADIDPAFVRRLDVIDFG 230 Query: 101 VRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYE 160 + V+TS D + +L PL +Q ++ + Sbjct: 231 TPAQIVETSTRGNVVRLAIRANDNFEYLAYQANDQYTIELKPLTQQEIEKREREKPTYTG 290 Query: 161 PSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKS 220 + L L ++ + I ++D+ + + Sbjct: 291 ETLTLQFQDM-----DLKAILHTLGDFAGINIVI-------SDDVQGSMALNLVNVPWDQ 338 Query: 221 QMPALLSAKIVADKRTNSLIISGPEK--ARQRITSLLKSLDVEESEEGNTRVYYLKYAKA 278 + +L +K + ++ ++++ P A++ L + EE T + + YAKA Sbjct: 339 ALDIILKSKGLGKRQEGNVMMIAPADIIAQREQQELEANKQQEELAPLRTELIQVNYAKA 398 Query: 279 TNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVI 338 + +L S + ++T D++TN++++ + E + ++ Sbjct: 399 AEIAAILQAGLGGGS-----GDGKSVGILSERGSVTTDQRTNTILVQDVSTKIEDVRRLV 453 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKK 398 A+LDI QVL+EA IV DG +LG ++ +V G + Sbjct: 454 AQLDIPVRQVLIEARIVTADDGFARDLGSRFGVSDV--------------MNSGEVNGDF 499 Query: 399 NGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASF 458 N + ANPA + ++ + G + L+AL S N+ +++A+P ++T + K A Sbjct: 500 NVNLPIANPAGSLGLSFARLQDGIV---VDMELSALESENRGEVVASPKVITANQKEAFI 556 Query: 459 NVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS 518 G+++P L G+ + + + V+ K +LKVTPQ+ V+L++ + + Sbjct: 557 KAGEEIPYLQGASSGAAN-----VQFKEAVLELKVTPQITPDGRVILDLAITQDTRGENV 611 Query: 519 --------NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVG 570 S+ P NT+ I VLV GET+VLGG+ + SKVPLLGDIPL+G Sbjct: 612 IFTSPDGGGSSGAPAINTQEIGTQVLVDNGETIVLGGIFQHRTTYDESKVPLLGDIPLLG 671 Query: 571 QLFRYTSTERAKRNLMVFIRPTIIRDD 597 LF+ T E K+ L++F+ P II Sbjct: 672 WLFKNTQREDTKQELLIFVTPKIIEQG 698 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 104/320 (32%), Gaps = 30/320 (9%) Query: 21 GHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL 80 E F + D++ + +G G I+I VQG++++ + + Sbjct: 286 PTYTGETLTLQFQDMDLKAILHTLGDFAGINIVISDDVQGSMALNLVN-VPWDQALDI-- 342 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDL 140 IL G N + + + + + L T ++ + A ++ Sbjct: 343 -ILKSKGLGKRQEGNVMMIAPADIIAQREQQELEANKQQEELAPLRTELIQVNYAKAAEI 401 Query: 141 APLLRQMMDA-----------GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 A +L+ + G+V + +N +++ ++ I + ++ ++D+ Sbjct: 402 AAILQAGLGGGSGDGKSVGILSERGSVTTDQRTNTILVQDVSTKIEDVRRLVAQLDIPVR 461 Query: 190 EKQQIIHLEYASAED-LAEILNQLISESHGKSQMPALLSAKI---VADKRTNSLIISGPE 245 + +I +A+D A L S + + +A+ + + Sbjct: 462 QV--LIEARIVTADDGFARDLGSRFGVSDVMNSGEVNGDFNVNLPIANPAGSLGLSFARL 519 Query: 246 KARQRITSLLKSLDVEESEEGNT--RVYYLK----YAKATNLVEVLTGVSEKLKD---EK 296 + + L +L+ E E +V + KA + L G S + ++ Sbjct: 520 QDGIVVDMELSALESENRGEVVASPKVITANQKEAFIKAGEEIPYLQGASSGAANVQFKE 579 Query: 297 GNARKPSSSGAMDNVAITAD 316 + + + D Sbjct: 580 AVLELKVTPQITPDGRVILD 599 >UniRef50_C5B3Y6 Putative General secretion protein D n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B3Y6_METEA Length = 693 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 136/664 (20%), Positives = 253/664 (38%), Gaps = 91/664 (13%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFS 71 A P + NF N ++++F + + L + +++DP+V G I+VR+ + S Sbjct: 43 TASGRPIEIGPSGHEVRLNFVNVELQEFARAVFEEVLHENVIVDPAVTGRITVRAGNPIS 102 Query: 72 QQEYYQFFLSILDLYGYSVITLDN------------------------------------ 95 ++ L G ++ N Sbjct: 103 KKAALALVREALQASGATLSRPGNVWRIGPAPRNAGPSREMVRVIPLRFIGITEARGAIQ 162 Query: 96 -----------------GFLKVVRSANVKTSPGM-IADSSRPGVGDELVTRIVPLENVPA 137 G V+ + + + +VPL+ A Sbjct: 163 PFLGANGNTSDVAASGTGRFLVLAGRTAEVEGLEQVVATFDVDELRGRAFALVPLKQAGA 222 Query: 138 RDLAPLLRQMMDAGSVGN---VVHYEPSNVLIL-TGRASTINKLIEVIKRVDVIGTEKQQ 193 +A L +M+ + + V E N +++ + I ++ I +D G ++++ Sbjct: 223 APVAQDLLRMIGSEGIAQGVKVFPVERMNAIMVASSNPDVIERVRGWIGGLDQSGQDQRR 282 Query: 194 II--HLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRI 251 + + A ++A++L+ ++ + Sbjct: 283 VYIYPVRNRRAAEIAKVLDGMLQGRGRVEA--------GTDGPAVAPGLTPQHGSLSGTG 334 Query: 252 TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV 311 + L G++ + A+ T L G E N+R + A V Sbjct: 335 SGSRGGLGNASFGAGSSGLS----AQFTALPSSEFGREENSLGTSTNSRSQGARDAQSGV 390 Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 + AD TN+LV+ + +A+ I LD+ QVL+EA I EV+ L GV+W Sbjct: 391 EVRADIATNTLVVVSRPEDYHIVASAIRNLDVLPTQVLIEATIAEVRLNEALRHGVRWYF 450 Query: 372 KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLL 431 + G Q + G + + V G I + + + + Sbjct: 451 QAGGLGQGASMGSGFGTSGRSVTGQGSAGEIA--------------LTYSLGLANAKLAI 496 Query: 432 TALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ---TTSGDNVFNTVERKTVG 488 +AL S +I+++P++ LDN+ A+ VG+ VP+ + S + + N +E K G Sbjct: 497 SALESVTDVEIVSSPALTVLDNQTATLKVGEQVPIATRSARSVVNADAPLVNDIEMKDTG 556 Query: 489 TKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-GPTFNTRTIQNAVLVKTGETVVLGG 547 L+VTP+VN G V+L+I+QE S V ++ S L PT R I + + VK+G +VLGG Sbjct: 557 VILQVTPRVNAGGLVMLDIKQEASDVVPTTTSNLDSPTIRLRQITSTIAVKSGAEIVLGG 616 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 ++ VP L DIPL+G + + + L++ IRPT++ ++ +++ E Sbjct: 617 IIQRGRHRGAGGVPFLRDIPLLGTALNNIDSGQDRTELVIIIRPTVMANNAEVSTVTGEI 676 Query: 608 YTRY 611 R Sbjct: 677 KRRL 680 >UniRef50_B2IBK3 General secretion pathway protein D n=2 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IBK3_BEII9 Length = 803 Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats. Identities = 137/674 (20%), Positives = 255/674 (37%), Gaps = 99/674 (14%) Query: 24 ENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS- 81 Y NF NA+ ++ ++G L +IDP V G IS+ S+ ++ + S Sbjct: 144 SAGDYQLNFENAEATAVIKTVLGDVLQVNYVIDPRVNGQISLTSSRPVPRKSLIRLLESA 203 Query: 82 -------ILDLYGYSVI------------------------------------------- 91 IL G + Sbjct: 204 LSGINAVILKQNGLYRVVPAGDATTIQNVHYHEAGEGFGVTVIGMKNVPVALAGRVLEGL 263 Query: 92 ---------TLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 D+ L +A+ + + A I+PL N + Sbjct: 264 GSRGGSVRMEADSNLLIFQGTASERQAALDAASMVDVDWLKTRSVAILPLTNSAPDTVIA 323 Query: 143 LLRQMMDAGSVG---NVVHYEPSN----VLILTGRASTINKLIEVIKRVD--VIGTEKQQ 193 + +++ G G ++V +P N VL ++ + I+K+ + ++D Sbjct: 324 EVHRILGTGEGGLSKDIVQMQPINRLNAVLAVSRNHAAIDKVTRWVSKLDKADYAALGVN 383 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 + L+YA+A+++A +LNQ+ S G++ + D ++S+ + Sbjct: 384 VYKLQYANAKNVAAMLNQIYGGSGGQTGQDQDKNVLQPGDSSSSSMQAGFSKSGSGSSQE 443 Query: 254 LLKSLDVEESEEGNTRVYYLKYA---------KATNLVEVLTGVSEKLKDEKGNARKPSS 304 + T A + T + + Sbjct: 444 PSSQSSNQSGSGRVTAGSLFANAGLRSSSANSNPYGSLSPATAAQTSGTRTDNTSSQAPD 503 Query: 305 SGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLN 364 + IT D TNSL+I A++ + I +D QV +E + EV + LN Sbjct: 504 DRQSKVIRITPDISTNSLLIHANRLDYRLIERTIHAMDRPPVQVEIEVTVAEVTLTDALN 563 Query: 365 LGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFN 424 GVQ N++ G + GI++A+ + G Sbjct: 564 YGVQ----------------AYLNSSAGSLQMLGSAGISNASIPLVTPHPAVNLMIGQI- 606 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT---TSGDNVFNT 481 + V++ AL++ +L+TPS+V LD + A VG VP+LS T T+ + N+ Sbjct: 607 ANPRVVINALSNITDVKVLSTPSLVVLDRQPAVLQVGNQVPILSQQATSTQTANPAIVNS 666 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGE 541 V K G L V P+VN V L+IEQ++S+V + + L PT + R +++ + + G+ Sbjct: 667 VNYKDTGIILNVLPRVNANGVVALDIEQQISAVTNPDPTNLTPTISQRRVRSTIAIPNGQ 726 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 TV+L GL+ + + S +P++ I + L ++ ++ L++FI+P I+R+ + Sbjct: 727 TVLLAGLIQETTNGTRSGLPIISKIRFLNDLVTNHNSSDSRTELIMFIKPQILRNGFDSQ 786 Query: 602 SLSKEKYTRYRQEQ 615 +S+E R + + Sbjct: 787 QVSEEFRERLQMMR 800 >UniRef50_B8GPV1 Type IV pilus secretin PilQ n=5 Tax=Chromatiales RepID=B8GPV1_THISH Length = 711 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 100/578 (17%), Positives = 207/578 (35%), Gaps = 65/578 (11%) Query: 46 QHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF----------------FLSILDLYGYS 89 + +G + V D ++ + + LD+ ++ Sbjct: 177 RISNVDFRRGAEGEGRVVVHLTDPRTRVDVREQAGRIELNFLRTGLPEDLERRLDVIDFA 236 Query: 90 VITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMD 149 ++ + + D+ V + V + P+ A ++ Sbjct: 237 TPVQTIDTIRESDRVRMVVAATGRYDTLSYQVENRYVLEVKPITEAEAEEIQRDRFTYTG 296 Query: 150 AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEIL 209 N E +VL L + +N ++ ++ + + Sbjct: 297 ERLSLNFQDIEVRSVLQLIADFTDLNVVV-----------------------SDSVTGNI 333 Query: 210 NQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGN 267 + + +L +K + + ++I P E A + + VEE Sbjct: 334 TLRLRNVPWDQALDIILRSKGLGMREAGNVIFVAPTEEIAAREKLEMESRKQVEELAPLR 393 Query: 268 TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITAD 327 + YA+A ++ ++ ++ D ++T D +TN+L++ Sbjct: 394 AEFIQVNYARADDVASIIRS--------------DRTTFLSDRGSLTVDNRTNTLLVQDT 439 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQ----FTNTG 383 ++ + +I RLDI QVL+E IV D +LG ++ VG FT Sbjct: 440 EAKLADIRRLIDRLDIPVQQVLIETRIVIASDDFARDLGARFGVTGVGQTGRTQTFTTGN 499 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 L + + + P + ++ + + ++AL + +I+ Sbjct: 500 LSGTTEMIRGDELSLLNRLNTNLPVISPSAGSIALSILRPDVLLDLEISALQVEGRGEII 559 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAV 503 ++P ++T + + A G+ +P + + + V+ +VTPQ+ + Sbjct: 560 SSPRVITANGQTARIQQGERIPYQEATSSGA-----TAVQFIEAVLATEVTPQITPNGNI 614 Query: 504 LLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 +L I + + P+ TR ++ V V+ GETVVLGG+ + S E + KVP Sbjct: 615 ILNIRVNKDNPG-TLVVQGTPSIETREVETQVFVRNGETVVLGGVYEIDSLETLEKVPFF 673 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 GD+P + LFR T K L++F+ P +I + + R Sbjct: 674 GDLPGIRHLFRRTGKSTRKAELLIFVTPKVIEETALNR 711 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 97/304 (31%), Gaps = 14/304 (4%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 E+ NF + ++R ++++ +++ SV G I++R + I Sbjct: 294 YTGERLSLNFQDIEVRSVLQLIADFTDLNVVVSDSVTGNITLRL-RNVPWDQALDI---I 349 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L G + N + + L + + A D+A Sbjct: 350 LRSKGLGMREAGNVIFVAPTEEIAAREKLEMESRKQVEELAPLRAEFIQVNYARADDVAS 409 Query: 143 LLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYA 200 ++R G++ +N L++ + + + +I R+D+ + + A Sbjct: 410 IIRSDRTTFLSDRGSLTVDNRTNTLLVQDTEAKLADIRRLIDRLDIPVQQVLIETRIVIA 469 Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV 260 S +D A L + + + +I G E + + L +L V Sbjct: 470 S-DDFARDLGARFGVTGVGQTGRTQTFTTG--NLSGTTEMIRGDELSL--LNRLNTNLPV 524 Query: 261 EESEEGNTRVYYLKYAKATNL---VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADE 317 G+ + L+ +L + G E + + ++ I E Sbjct: 525 ISPSAGSIALSILRPDVLLDLEISALQVEGRGEIISSPRVITANGQTARIQQGERIPYQE 584 Query: 318 QTNS 321 T+S Sbjct: 585 ATSS 588 >UniRef50_B8E238 Type II and III secretion system protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E238_DICTD Length = 1421 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 128/597 (21%), Positives = 239/597 (40%), Gaps = 69/597 (11%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 ++A L+ + + +ADIR+ + +G+ +ID V G I + N Sbjct: 882 AVVAKELLTVEREGDKVYVSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNR- 940 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 E + G IT ++ V T P +A T+I Sbjct: 941 VELPEVLNIIQKV----GKLSITTEDKVTYVKPYEEKVTVPVEVA-----------KTKI 985 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD---V 186 L+ + D+ + ++ ++ + + + +LI G+ + L ++I R+D Sbjct: 986 YALKYITLSDIERVGGSLVKN---LSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKK 1042 Query: 187 IGTEKQQIIHLE------YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 ++++ +E Y S + + + +++ E K+ + ++ K+ + + + Sbjct: 1043 EAVVAKELLTVEREGDKVYVSCDLRSADIREVLRELGKKADINFVIDQKVTG--QIDLYL 1100 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYA--KATNLVEVLTGVSEKLKDEKGN 298 I S + ++ E+ T V L A +T + LK + Sbjct: 1101 NRVELPETLEILSRITNISFEKVGS-ATFVKPLNTTVTTAKEGTPTVTKEYK-LKYISLD 1158 Query: 299 ARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 K SG +V+ D+ + L++ + ++IA+LD QV ++ ++EV Sbjct: 1159 TLKSVVSGIAKDVSFYYDQTSGLLLVQGPADQVSSVESMIAKLDKPTPQVKIDVQVIEVS 1218 Query: 359 DGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM 418 N ++G++W+ ++ L + + + Sbjct: 1219 RENVKDIGIEWSTGSISTGLQITANLGWQDLRVSIVNP---------------------- 1256 Query: 419 AAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV 478 G + AL + NK ILA PS+ TL K +G VP++S + Sbjct: 1257 ------GQISANIRALETQNKARILAQPSMTTLSGKATRIMIGDRVPLISYDAQGN---- 1306 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 V VG L VTP VN + I +VS++ + P +TR Q V +K Sbjct: 1307 -RQVSFVDVGIILNVTPTVNADGTITANINPQVSTIQGY--VSDVPIISTREAQTIVNLK 1363 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 GET+ LGGLL + +SKVPLLGDIP++G+LF+ T++ +R L++ I P +I Sbjct: 1364 NGETLALGGLLRQEEIDSMSKVPLLGDIPILGELFKARKTQKVERELIILITPKLIE 1420 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 136/356 (38%), Gaps = 38/356 (10%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 ++A L+ + + +ADIR+ + +G+ +ID V G I + N Sbjct: 720 AVVAKELLTVEREGDKVYVSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNR- 778 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 E + G IT ++ V T P +A T+I Sbjct: 779 VELPEVLNIIQRV----GKLSITTEDKVTYVKPYEEKVTVPVEVA-----------KTKI 823 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD---V 186 L+ + D+ + ++ ++ + + + +LI G+ + L ++I R+D Sbjct: 824 YALKYITLSDIERVGGSLVKN---LSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKK 880 Query: 187 IGTEKQQIIHLE------YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 ++++ +E Y S + + + +++ E K+ + ++ K+ T + Sbjct: 881 EAVVAKELLTVEREGDKVYVSCDLRSADIREVLRELGKKADINFVIDQKV-----TGQID 935 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNL-VEVLTGVSEKLKDEKGNA 299 + + ++++ + + Y Y + + VEV LK + Sbjct: 936 LYLNRVELPEVLNIIQKVGKLSITTEDKVTYVKPYEEKVTVPVEVAKTKIYALKYITLSD 995 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 + + N++++ D++T L+ + + L +I+R+D+ + EA++ Sbjct: 996 IERVGGSLVKNLSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKK----EAVVA 1047 Score = 75.9 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 90/278 (32%), Gaps = 25/278 (8%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ +F+ A+IR ++ +GQ +G I+ D VQG ISV ++ + L Sbjct: 311 QQRISVSFDRAEIRDVLKAMGQLVGLNIITDIGVQGRISVYL-KDIPFKDAFYAL---LA 366 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 I + K +L+T++ L+ ++ +L Sbjct: 367 SSDLGYIQQGEIIIVANLDKLQKIE------------SRDLMTKVYQLKYFESQKAKDIL 414 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 ++ + N LI++ S K+ IK +D+ +L E Sbjct: 415 SKI---SKTAIFDSDDSRNWLIVSAPPSEFAKIENTIKTLDIPSESIAGAKNLGKVILEK 471 Query: 205 LAEILNQLISESHGKSQMPALLSAK------IVADKRTNSLIISGPEKARQRITSLLKSL 258 + ++ + + I + + + ++ R L+ Sbjct: 472 SEDTYLVTLTAKGDDIKDILQEIVQKSGKNIIFSKDVSGGVYLTLNRVPLDRAVDLIVRS 531 Query: 259 DVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK 296 E V + KA + + + E +K EK Sbjct: 532 TGYIYEVREGGVILVSAPKAEGVPSPIIEIKELVKVEK 569 Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 24/149 (16%) Query: 201 SAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLL----- 255 L L + Q + K + K +++ + + ++ Sbjct: 325 DVLKAMGQLVGLNIITDIGVQGRISVYLKDIPFKDAFYALLASSDLGYIQQGEIIIVANL 384 Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITA 315 L ES + T+VY LKY ++ ++L+ +S+ + Sbjct: 385 DKLQKIESRDLMTKVYQLKYFESQKAKDILSKISKTAIFDS------------------- 425 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIR 344 D+ N L+++A S K+ I LDI Sbjct: 426 DDSRNWLIVSAPPSEFAKIENTIKTLDIP 454 >UniRef50_A7BUG3 Bacterial type II and III secretion system protein n=3 Tax=Gammaproteobacteria RepID=A7BUG3_9GAMM Length = 698 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 93/502 (18%), Positives = 191/502 (38%), Gaps = 55/502 (10%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 + + + P + + G Y+ N ++ + I K+ E+ + Sbjct: 214 QIHYIDTFPMGPHTKMKIAIGDQAEYHAYQTENTYVIEVKEKIIVKVDEIKIEDRKYEGQ 273 Query: 191 KQQI-------------------IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIV 231 ++L +++ + + + + +L A+ + Sbjct: 274 LVSFNFQDIDVRAALTLLFDLPGVNLNMVASDVVKGSITLRLKNIPWDQALDIILEAREL 333 Query: 232 ADKRTNSLIISG--PEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 ++ ++ + ++ L ++E E T + YAKA ++ +L Sbjct: 334 GMRKIGNVAMIDLKKNIDERKQRELSNKKKIKELESLYTEFIRINYAKAKDIEALLRTSG 393 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 + S ++ DE+TN+L+I + ++ ++A LD QVL Sbjct: 394 QH-------------SFLSSRGNVSTDERTNTLIIQDTAAKIAEIRKLLAELDTPVRQVL 440 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNV---------------GAQQFTNTGLPIFNAAQGVA 394 +E+ IV + LGV++ G + G + Sbjct: 441 IESRIVIANNNFSKALGVKFGYSANEDLGFGNGIVFGGKKGGDTTFSGGTGFSSDNTATG 500 Query: 395 DYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNK 454 + + I S A +A + + L+A+ S +I++ P I+T + + Sbjct: 501 EGQGENFIVSLPAAIANPAAVGLAIGKIGSYLLQLELSAMQSEGSGEIISNPRIITGNQQ 560 Query: 455 LASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV 514 A G ++P + +G V+ K +LKVTPQ+ D V +E+ + S Sbjct: 561 EAIITQGTEIPYVQQ----AGVGSVAQVQFKQAVLELKVTPQITPDDRVNMELAVKKDSP 616 Query: 515 DSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFR 574 N + + R ++ VLV GETVVLGG+ + ++++P D+PL+G+LF+ Sbjct: 617 G--VNIGGNLSIDKREVKTNVLVDNGETVVLGGVYERTRSNAINRIPFFADLPLIGELFK 674 Query: 575 YTSTERAKRNLMVFIRPTIIRD 596 S K L++F+ P I+++ Sbjct: 675 NRSKSDDKSELLIFVTPKILKE 696 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 70/175 (40%), Gaps = 9/175 (5%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQH--LGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 E + NF + D+R + ++ + ++ V+G+I++R + Sbjct: 269 KYEGQLVSFNFQDIDVRAALTLLFDLPGVNLNMVASDVVKGSITLRL-KNIPWDQALDI- 326 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 IL+ + + N + ++ + +++ + + L T + + A+D Sbjct: 327 --ILEARELGMRKIGNVAMIDLKKNIDERKQRELSNKKKIKELESLYTEFIRINYAKAKD 384 Query: 140 LAPLLRQMMD---AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 + LLR S GNV E +N LI+ A+ I ++ +++ +D + Sbjct: 385 IEALLRTSGQHSFLSSRGNVSTDERTNTLIIQDTAAKIAEIRKLLAELDTPVRQV 439 >UniRef50_Q39X07 Type II and III secretion system protein:NolW-like:Secretin/TonB, short-like n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39X07_GEOMG Length = 870 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 110/594 (18%), Positives = 209/594 (35%), Gaps = 82/594 (13%) Query: 13 AALLMPCAGHAENEQYGANFNN----------ADIRQFVEIVGQHLGKTILIDPSVQGTI 62 A E N D F +V + + V+G Sbjct: 346 TAPCNAEKPVKSAEGLTLTLKNCILPRKWQRHLDTSAFASVVQKVTPYQV----KVKGRH 401 Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG 122 V+ +Q Y+ +++ T+ + ++ ++ Sbjct: 402 DVKVQVALRRQTSYEL------------RREGGVIYLDLKNPVDITAAPVASEPAKQTES 449 Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 + +V + V A G V+ L + + I K+ ++I Sbjct: 450 ERSAPVVVKSQAVSPTAAAD-----------GKKVYTGRRVTLEFSD--ADIRKIFQLIA 496 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 ++ +L + +D+ ++ + + +L K + +R +++ Sbjct: 497 ----------EVSNLNFIVGDDVTGTISLKLVNVPWDQALDVILENKGLGMQRDGNIVQI 546 Query: 243 GPEKARQRI--TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 P+ + E+ E T V+ + YA ++V + Sbjct: 547 RPKSKIMTLADEEQKAKKSREQGMELKTEVFDVNYAAVGDVVTQFNTL------------ 594 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 + I+ D +TN +++ V ++ ++ LDI QV++EA IVE Sbjct: 595 ------KSERGMISQDARTNRVIVKDIAPVVAEMRNLLKSLDIPEKQVMIEARIVEASST 648 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 LG+QW A T + G A F Sbjct: 649 VTQELGIQWGIHARDANTIGVTNADVGFGGILTGLAPTAGTFGPGAAAGITFGKL----- 703 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN 480 G + L+ALAS + I+++P +VTL+NK A + GQ +P + S Sbjct: 704 -ISGGSLDLKLSALASGERIKIISSPKVVTLNNKAAKISQGQSIPYSTVSAEG------T 756 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTG 540 E L+VTP + ++ ++I+ +S + + P N + +LV+ G Sbjct: 757 KTEFVEAALTLEVTPHIASDGSISMKIKATNNSAAPAPTGAV-PAINKKEATTELLVRNG 815 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 ET V+GG+ D + VP DIPL+G LF+ ++T++ K L++FI P I+ Sbjct: 816 ETTVIGGIYVDNDSQADQGVPFFKDIPLLGWLFKSSNTQKIKNELLIFITPKIV 869 >UniRef50_Q60BY4 Fimbrial assembly protein PilQ n=1 Tax=Methylococcus capsulatus RepID=Q60BY4_METCA Length = 729 Score = 305 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 99/535 (18%), Positives = 177/535 (33%), Gaps = 51/535 (9%) Query: 76 YQFFLSILDLYGYSVITLD-NGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 + + + + L + ++ D S G L + PL Sbjct: 225 LEVIDFATPVKWVEAMPVGRGARLLITPVSD-------EYDYSSYQSGKLLTVELRPLSR 277 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 + N NVL + + +N ++ V G+ ++ Sbjct: 278 AEKEEAKKRRLVFAGERLSLNFQDIPVRNVLQILADFTNLN----IVASDSVQGSVTLRL 333 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 + + A DL L ++ GK Q ++ N R L Sbjct: 334 NEVPWDEALDLV-----LKAKGLGKRQEANSNVIRVAPLDEIN----------RSERDEL 378 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVL--------------TGVSEKLKDEKGNAR 300 VE+ E T + + Y KA ++ +V+ ++ A Sbjct: 379 EALKVVEDLEPLRTEIIQINYTKADDIKKVIMGTTEKAEKAITRPEALTGGPGVTSTEAY 438 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 + S +T D +TN L++ E++ ++ +LD QV++E+ +V Sbjct: 439 DVTQSILSSRGNVTTDPRTNQLIVQDTPRNLERIRDLVRQLDKPVRQVMIESRVVIANVD 498 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 LG + + A G+ A Sbjct: 499 FLRELGAKLDFRPKNLTAAERLNPTGSMADL---------GVDLAKLTTLSPYGTAQYVV 549 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN 480 + + L+A + +I+A P ++T D A G ++P Q T G Sbjct: 550 SMGDYLLDLELSAAQKEGRGEIVANPRVLTADQSKAKIMQGVELPYQITQQGTGGGIPVQ 609 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTG 540 V K +L VTP + D +L+++ + R I V G Sbjct: 610 NVAFKPAVLELDVTPHITPDDHILMDLMVKKDD-KGELAPNGNFAIEKREIDTVAQVANG 668 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 ETVVLGG+ + + KVP GD+P +G +FR + E K+ L++FI P I++ Sbjct: 669 ETVVLGGVYEGTRRNNTDKVPFFGDLPGIGFMFRRNAVEDRKKELLIFITPKIVK 723 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 71/212 (33%), Gaps = 36/212 (16%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+ NF + +R ++I+ I+ SVQG++++R N+ E +L Sbjct: 291 AGERLSLNFQDIPVRNVLQILADFTNLNIVASDSVQGSVTLRLNE-VPWDEALDL---VL 346 Query: 84 DLYGYSVITLDN-GFLKVVR-SANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 G N ++V ++ + + L T I+ + A D+ Sbjct: 347 KAKGLGKRQEANSNVIRVAPLDEINRSERDELEALKVVEDLEPLRTEIIQINYTKADDIK 406 Query: 142 PLLRQMMDA------------------------------GSVGNVVHYEPSNVLILTGRA 171 ++ + S GNV +N LI+ Sbjct: 407 KVIMGTTEKAEKAITRPEALTGGPGVTSTEAYDVTQSILSSRGNVTTDPRTNQLIVQDTP 466 Query: 172 STINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 + ++ ++++++D + + A+ + Sbjct: 467 RNLERIRDLVRQLDKPVRQVMIESRVVIANVD 498 >UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein n=19 Tax=Francisella RepID=Q14H71_FRAT1 Length = 594 Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats. Identities = 123/617 (19%), Positives = 231/617 (37%), Gaps = 54/617 (8%) Query: 2 KGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGT 61 K L + L L + E +N + +IVG+ K + D ++ Sbjct: 6 KKLLVVLTILDGILGYDVSVADTKESQVSNQPQTSEQPVAKIVGREENKDKVTDKHIKD- 64 Query: 62 ISVRSNDTFSQQEYYQF-----------FLSILDLYGYSVITLDNGF---LKVVRSANVK 107 + + + + ++ + + L GY++ N K V + + K Sbjct: 65 --LEFHRSLNGSAVFEVAFEENISNFSGYKTKLSQDGYTLTITFNDTTISYKWVSNIDTK 122 Query: 108 TSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP-LLRQMMDAGSVGNVVHYEPSNVLI 166 ++ G +V I L+ + D + + V + + + Sbjct: 123 VFNTIVDSIKIFKEGKSVVFVIHSLDRISLSDFKEGNIFKFKIDRRNSRVEGFNVNEPIS 182 Query: 167 LTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALL 226 ++ + + + +++V+ L + + ++ + M +L Sbjct: 183 ISFKDAPVQTVLQVLSEFAG----------LNLVVSSSVHGNISIDLKNVPWNEVMNIVL 232 Query: 227 SAKIVADKRTNS--LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEV 284 +K +A K+ +S + + E A Q L +E + T L Y A V Sbjct: 233 VSKGLATKKMSSILYVATAAEIAAQEQLELQTKRSLENNATLVTEFIPLNYTTAQAAQTV 292 Query: 285 LTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIR 344 +T +++ + +ITAD +TN+L++T + ++ V+ +DI Sbjct: 293 ITSMAK-----------QNGGIMSPRGSITADARTNTLIVTDTEEKLPRIKEVVNEIDIP 341 Query: 345 RAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITS 404 QVL+EA IVEV + L LG + + + N Sbjct: 342 NDQVLIEARIVEVLRTSALELGFNYGVVDPSGRVNIGLDTFNSNPNPAPGPTPGPTPTPV 401 Query: 405 ANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464 +A G + + AL S + + +A+P +V +N++A G+DV Sbjct: 402 DTFVGTTAKLAYTIAGGV---RLEMEVRALESESLAEEVASPHLVVANNQVAFIKDGEDV 458 Query: 465 PVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS-----SN 519 P + + V + +L+VTPQ+ ++++I +SV +S Sbjct: 459 PY-----NQATASGAAAVAFQEAVLELQVTPQIAPDGNIIMDILVTKNSVGASPGKTPQG 513 Query: 520 STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE 579 L P R I V+ K G+TVV+GG+ KE+ +K+P LGDIP +G LF YT Sbjct: 514 GDLPPIIKKREITTKVMTKDGDTVVIGGIYQKTQKEERNKIPFLGDIPYLGYLFSYTKIT 573 Query: 580 RAKRNLMVFIRPTIIRD 596 L++FI P II Sbjct: 574 DQDSELLIFITPKIIES 590 >UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 Tax=Acinetobacter RepID=B2I0J4_ACIBC Length = 721 Score = 304 bits (778), Expect = 9e-81, Method: Composition-based stats. Identities = 100/515 (19%), Positives = 194/515 (37%), Gaps = 52/515 (10%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK-------- 182 P+ ++ A + + + + + Y+ N L ++ + + + K Sbjct: 204 PVSSIDAYNDKGVGVITIQSSGSYEYMAYQAENKLTISLKRPQDKNVTSLYKTPNYSGNK 263 Query: 183 -RVDVIGTEKQQIIHL-------EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADK 234 +D E ++++ L +A+ + + + + + +L K + + Sbjct: 264 LSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNLDKR 323 Query: 235 RTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 R ++I P E + + T LKYAKA +++ ++T S Sbjct: 324 RNGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAKAGDIMGLITQGSNNS 383 Query: 293 KDEKGNA-----------------RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLA 335 + + S IT D++TN+L+I +++ Sbjct: 384 NGLQHTSGGGTSTSTNLNTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIR 443 Query: 336 TVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIF-------- 387 +I LD++ QV+VEA IV LGV+W + G N + Sbjct: 444 KMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGILSQGITNNNNLLVGGSETTLWNLR 503 Query: 388 ------NAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKND 441 ++ + + + + + L+AL ++ + Sbjct: 504 EPKKDETTGGYKYTIERPDNLNVDLGVSNPAGSIAFGLISMSDFMLDLELSALQADGYGE 563 Query: 442 ILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGD 501 +++TP ++T D + A GQ VP S + + +G + K L VTP + Sbjct: 564 VISTPKVMTADKQTAKVATGQQVPYQSTTNSAAGSTATTS--FKDALLSLNVTPSITPDG 621 Query: 502 AVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVP 561 + ++++ SV + N I VLV GETV+LGG+ + + +KVP Sbjct: 622 KIQMKLDISKDSVAGA-APNGELILNKNNINTNVLVDNGETVILGGVFEQTTMNSQTKVP 680 Query: 562 LLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 GDIP+VG+LFR K+ L++F+ P I+ D Sbjct: 681 FFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVND 715 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 70/215 (32%), Gaps = 37/215 (17%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 + + +F + ++R+ ++++ G ++ SVQG I++R + Sbjct: 256 TPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRL-KDVPWDQALDI- 313 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 IL N + +K ++ L T + L+ A D Sbjct: 314 --ILKTKNLDKRRNGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAKAGD 371 Query: 140 LAPLLRQMMDAGS---------------------------------VGNVVHYEPSNVLI 166 + L+ Q + + G + + +N LI Sbjct: 372 IMGLITQGSNNSNGLQHTSGGGTSTSTNLNTGVDSLGNNVGSLLSPRGTITQDDRTNTLI 431 Query: 167 LTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 + A +I+++ ++I +DV + + AS Sbjct: 432 INDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRAS 466 >UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gammaproteobacteria RepID=B7VLJ8_VIBSL Length = 572 Score = 304 bits (778), Expect = 9e-81, Method: Composition-based stats. Identities = 129/610 (21%), Positives = 236/610 (38%), Gaps = 67/610 (10%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIR-----QFVEIVGQHLGKTILIDPSV 58 ++K ++++ + + E N D R V I+ ++ Sbjct: 9 VSKALQGFAVSVMLVVSVFSYAESLPNQLENIDFRVNKEKDAVIIIELATSTAVVDVQRA 68 Query: 59 QGTISVRS-NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSS 117 Q +S+ N + + Y +LD+ ++ K S + + Sbjct: 69 QEGLSIELLNTQVNDDKLY-----LLDVKDFATSVEGIEVYKETPSTRLLATIAGDYQYE 123 Query: 118 RPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKL 177 G + I + + + + N NVL L + N + Sbjct: 124 YNLKGRFIEVVISRPT-IDEVTIEKNVLEKEGKVISINFQDIPVRNVLQLIADYNDFNLV 182 Query: 178 IEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTN 237 + ++ + L + + + +L K + + Sbjct: 183 V-----------------------SDSVTGNLTLRLDGVPWQQVLDIILQVKGLDKRVDG 219 Query: 238 SLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE 295 ++I+ P E + +L KS EE E + + + +AKAT++ +++ G Sbjct: 220 NVILVAPKAELDLREQQALEKSRLEEELGELKSEIIKINFAKATDIADMIGG-------- 271 Query: 296 KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 + + S + +IT DE+TNSL+I + + +I LDI QV +EA IV Sbjct: 272 -----EGAVSMLSERGSITIDERTNSLLIRELEENIAVIRGIIESLDIPVKQVQIEARIV 326 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 V +GN LGV+W + F G N + Y NGG ++ + ++ Sbjct: 327 TVTEGNLDELGVRWGVSSTNGS-FKVGGSIEGNHPSQITPYDDNGGNSAIDDFLNVNLGA 385 Query: 416 NGMAAGFF---------NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 +A + + L+AL +K +I+++P ++T + K A G ++P Sbjct: 386 TSPSASSIAFQVAKLGSDTLLDLELSALQQESKAEIISSPRLITTNKKPAYIEQGTEIPY 445 Query: 467 LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG--P 524 L S + + +V K LKVTPQ+ + ++L++ + G Sbjct: 446 LESSSSGA-----TSVAFKKAVLSLKVTPQITPDNRLVLDLSVTQDRPGQVVKTGTGEAV 500 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 +T+ I VLV GETVVLGG+ QV KVPLLGD+P++G LFR + K Sbjct: 501 AIDTQRIGTQVLVNNGETVVLGGIFQHSVSSQVDKVPLLGDLPVLGALFRRSYENVGKSE 560 Query: 585 LMVFIRPTII 594 L++F+ P ++ Sbjct: 561 LLIFVTPKVV 570 >UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=Acinetobacter RepID=Q6F7E3_ACIAD Length = 723 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 96/441 (21%), Positives = 179/441 (40%), Gaps = 30/441 (6%) Query: 183 RVDVIGTEKQQIIHL-------EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKR 235 +D E ++++ L +A+ + + + + + +L K + +R Sbjct: 280 SLDFQDIEVRRVLQLLADFTNINMVTADSVQGNITLHLKDVPWDQALDIILKTKNLDKRR 339 Query: 236 TNSLIISGPEKARQRITSLLKSL--DVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK 293 ++I P + + T LKYAKA ++ +++T Sbjct: 340 NGNVIWIAPVSELIKSEEDEAKAIAQSTKLAPLQTEYILLKYAKAADIEKLITQGRNSGT 399 Query: 294 DEKGNARKPS--------SSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRR 345 + + I+ D +TN+L+I +++ +I LDI Sbjct: 400 SNSNTNGSATVEPLGDSVGTLLSPRGTISLDPRTNTLIINDTSQKIDQIRKMIDLLDIPV 459 Query: 346 AQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSA 405 QV++EA IV +GV+W + G Q +N + + G + Sbjct: 460 KQVMIEARIVRATTSFSKEMGVKWGILSQGINQNSNLLVGGSETTLWNLRNPDSNGTYTI 519 Query: 406 ----------NPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKL 455 S+ + + L+AL ++ ++++TP +++ D + Sbjct: 520 ERPDNLNVDLGVTTTGASSIAFGLISLSDFMLDLELSALQADGYGEVISTPKVMSADKQK 579 Query: 456 ASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVD 515 A G +VP S + + +G + K L+VTP + +L+E+ S++ Sbjct: 580 AKVATGVEVPYQSTTNSAAGSTATTS--FKEALLSLEVTPNITPDGKILMELNIANDSIN 637 Query: 516 SSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRY 575 S + + N TI VLV GETVVLGG+ + + V+KVP LGD+P VG+LF+ Sbjct: 638 SYAQNGEA-ILNKNTINTNVLVNNGETVVLGGVFEQTTNNAVTKVPFLGDLPYVGRLFKK 696 Query: 576 TSTERAKRNLMVFIRPTIIRD 596 T+ AK L++F+ P I+ D Sbjct: 697 TAKSEAKNELLIFVTPRIVND 717 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 65/196 (33%), Gaps = 28/196 (14%) Query: 21 GHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL 80 + ++ +F + ++R+ ++++ ++ SVQG I++ + Sbjct: 272 QNYTGKKISLDFQDIEVRRVLQLLADFTNINMVTADSVQGNITLHL-KDVPWDQALDI-- 328 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDL 140 IL N S +K+ ++ L T + L+ A D+ Sbjct: 329 -ILKTKNLDKRRNGNVIWIAPVSELIKSEEDEAKAIAQSTKLAPLQTEYILLKYAKAADI 387 Query: 141 APLL-------------------RQMMDA-----GSVGNVVHYEPSNVLILTGRASTINK 176 L+ + D+ G + +N LI+ + I++ Sbjct: 388 EKLITQGRNSGTSNSNTNGSATVEPLGDSVGTLLSPRGTISLDPRTNTLIINDTSQKIDQ 447 Query: 177 LIEVIKRVDVIGTEKQ 192 + ++I +D+ + Sbjct: 448 IRKMIDLLDIPVKQVM 463 >UniRef50_D2QZD1 Type II and III secretion system protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZD1_9PLAN Length = 1314 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 119/556 (21%), Positives = 232/556 (41%), Gaps = 62/556 (11%) Query: 155 NVVHYEPSNVLILTGRASTINKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAEILNQL 212 + N +++TG ++ + +I+++D + ++ +E A LAE L L Sbjct: 604 RITADPRGNSIVVTGPTQSMPLMQALIEQMDALPATEAQIKVFTIENGDATALAETLQNL 663 Query: 213 ISE---------------SHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS 257 + + + +L+ + D RTNS++ SG + +L Sbjct: 664 FGQQQQGGGQNQGQFGLQTATGAGDSSLVPLRFSVDTRTNSIVASGTTGDLNVVYQILVR 723 Query: 258 LDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADE 317 LD + + T VY L+ + A ++ + + +D + ++ + Sbjct: 724 LDEGDIRQRVTTVYRLRNSPAADVATAINELLTNQRDLSQQNAELTTQFEQFEREVIVVP 783 Query: 318 Q--TNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 + +NSL+++A +++ V+ LD R V+++ +I EV + LGV+ ++ Sbjct: 784 EIVSNSLIVSATPRYFDEIKKVVEDLDRRPPMVIIQVMIAEVLLSDVEQLGVELGIQDSL 843 Query: 376 --AQQFTNTGLPIFNAAQGVADYKKN----------GGITSANPAWDMFSAYNGMAAGFF 423 + + G P N A G + G + D Y G+ Sbjct: 844 LFDRGIGSVGFPFNNVALGNNSDATSLATRESVAGQGLSSFGVGRTDPTLGYGGLVLSAS 903 Query: 424 NGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVE 483 + VL+ AL + + +++ P + TLDN+ A VG VP ++ SQ T + NTV Sbjct: 904 SESVSVLVRALQQSRRLQVISRPQVQTLDNQPAFVQVGARVPRITSSQLTVNGTINNTV- 962 Query: 484 RKTVGTKLKVTPQVNEGDAVLLEIEQEVS-----------SVDSSSNSTLGPTFNTRTIQ 532 + VG L VTP+ +++EI+ E S S++S+ + P T Q Sbjct: 963 LENVGIILGVTPRTAPDGMIVMEIDAEKSELGPEAEGIPISINSNGDVIRSPQIRIATAQ 1022 Query: 533 NAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPT 592 V ++G+TV++GGL+ +E +VP LGDIP++G+LFR+ S +R L++ + P Sbjct: 1023 TTVSARSGQTVIIGGLITKNQQESTRRVPYLGDIPVLGRLFRFDSVSDERRELLIILTPF 1082 Query: 593 IIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVG-------------------SEDLP 633 I+++D+ ++ + R ++ L+G Sbjct: 1083 IMQNDEDIEWMNMRESERMSWCMADVVNIHGDVLLGSGPQAPASEASPLIFPDNNPSAPQ 1142 Query: 634 VLDENTFNSHAPAPSS 649 + ++ AP P++ Sbjct: 1143 LTPPGVYDPQAPTPAT 1158 Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 92/218 (42%), Gaps = 5/218 (2%) Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAE 207 + + E +V+++ G+ + + +++++I ++ E + ++ + D Sbjct: 324 LGRIGDVQIEFLEGLDVMVVRGKKADVERVLKIIDEIERQSEETKPVVEIYTLKNVDG-R 382 Query: 208 ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGN 267 L+ L++ + + I + N+L++ G +A + LL+ LD S E Sbjct: 383 ALSDLVATIYDQVFSARQSRVTITPLVKPNALMLIGRAEAIPPVVELLQKLDQTVSPESQ 442 Query: 268 TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITAD 327 +V+ LK+ + + + + R +G V A+ +TNSL++ A Sbjct: 443 LKVFRLKFMSSIDAERTVRNFFVDRPGFGTDPR----TGLGTRVLTIAEYRTNSLIVQAS 498 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 Q ++ ++ LD+ ++ E I ++++ L Sbjct: 499 QRDLLEVQKLLDTLDVAASESANEVRIFKLKNAVAEEL 536 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 127/384 (33%), Gaps = 78/384 (20%) Query: 33 NNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY-------YQFFLSILDL 85 AD+ + ++I+ + + + + + + + Y S Sbjct: 346 KKADVERVLKIIDEIERQ----SEETKPVVEIYTLKNVDGRALSDLVATIYDQVFSARQS 401 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 + L ++ A + V E ++ L+ + + D +R Sbjct: 402 RVTITPLVKPNALMLIGRAEAIPPVVELLQKLDQTVSPESQLKVFRLKFMSSIDAERTVR 461 Query: 146 QMM------------DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE--- 190 G+ + +N LI+ + ++ +++ +DV +E Sbjct: 462 NFFVDRPGFGTDPRTGLGTRVLTIAEYRTNSLIVQASQRDLLEVQKLLDTLDVAASESAN 521 Query: 191 KQQIIHLEYASAEDLAEILN---------------------------------------- 210 + +I L+ A AE+LA +L Sbjct: 522 EVRIFKLKNAVAEELAPVLQEAVTGQIQGAGQQQGQQQQQQGQSGQGAQTPATATRRSTN 581 Query: 211 ----QLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEG 266 ++ SE G + L +I AD R NS++++GP ++ + +L++ +D + E Sbjct: 582 LQLLRVDSEGRGVLESGILSDMRITADPRGNSIVVTGPTQSMPLMQALIEQMDALPATEA 641 Query: 267 NTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV--------AITADEQ 318 +V+ ++ AT L E L + + + G + + D + Sbjct: 642 QIKVFTIENGDATALAETLQNLFGQQQQGGGQNQGQFGLQTATGAGDSSLVPLRFSVDTR 701 Query: 319 TNSLVITADQSVQEKLATVIARLD 342 TNS+V + + ++ RLD Sbjct: 702 TNSIVASGTTGDLNVVYQILVRLD 725 >UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7T3_CHRVI Length = 787 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 95/456 (20%), Positives = 191/456 (41%), Gaps = 60/456 (13%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ + + + + +L K +A ++ ++++ P E A Q + Sbjct: 333 LNLVASDTVGGNITLRLKNVPWDQALDIILKTKGLAMRQNGNVLMVAPAQELAAQEQLEM 392 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV-------------------------S 289 +EE T + YAKA ++ VL+G + Sbjct: 393 ESMQKIEELAPLRTEFIQVNYAKAADIAAVLSGAGRAASNPASPDARQTGTATRRDQVGA 452 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 L A ++T DE+TN+L++ + E++ V+ LD+ QV+ Sbjct: 453 SGLAQVAAAAGVSDRGILSPRGSLTFDERTNTLIVQDTLTALEEVRRVVNLLDVAVRQVM 512 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTN------------------TGLPIFNAAQ 391 +E+ +V + +LGV++ + N +G NA+ Sbjct: 513 IESRVVIANNSFARDLGVRFGVSGSMGKVGDNEVLIGGGQNGYLAVGDYDSGPFGLNAST 572 Query: 392 GV------ADYKKNGGITSANPAWDMFSAYNG----MAAGFFNGDWGVLLTALASNNKND 441 G D N + + PA + A +G + + + L+A+ + + Sbjct: 573 GTPYNSTLTDDAGNATLITNLPATTIQDAASGSIDFLIGKVGSYLIQLELSAMQREGRGE 632 Query: 442 ILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGD 501 I+++P ++T D A+ VG ++P S + ++ K +L VTPQ+ D Sbjct: 633 IISSPRVITADKNKATIKVGSEIPYQEQSGQGN-----TSIAFKEAVLQLDVTPQITPDD 687 Query: 502 AVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVP 561 +++++E D S + P +TR+++ V++ GETVVLGG+ + +VP Sbjct: 688 RIIMDLEVRKDRPDWSRSINNTPPIDTRSVKTNVVIDNGETVVLGGVFEREKTFSKEQVP 747 Query: 562 LLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 LGD+P++G+LF+ + + + L++F+ P I++ D Sbjct: 748 WLGDVPVLGRLFKQEARQDSNTELLIFVTPKILKSD 783 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 97/353 (27%), Gaps = 57/353 (16%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 + E+ NF + ++R ++++ ++ +V G I++R + I Sbjct: 306 YDGERLSLNFQDIEVRAVLQVLADFTDLNLVASDTVGGNITLRL-KNVPWDQALDI---I 361 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L G ++ N + + + L T + + A D+A Sbjct: 362 LKTKGLAMRQNGNVLMVAPAQELAAQEQLEMESMQKIEELAPLRTEFIQVNYAKAADIAA 421 Query: 143 LLRQMMDAGS-----------------------------------------VGNVVHYEP 161 +L A S G++ E Sbjct: 422 VLSGAGRAASNPASPDARQTGTATRRDQVGASGLAQVAAAAGVSDRGILSPRGSLTFDER 481 Query: 162 SNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQ 221 +N LI+ + + ++ V+ +DV + + A+ A L S + Sbjct: 482 TNTLIVQDTLTALEEVRRVVNLLDVAVRQVMIESRVVIANNS-FARDLGVRFGVSGSMGK 540 Query: 222 MPALLSAKIVADKRTNSLIISGP----EKARQRITSLLKSLDVEESEEGNTRVYYLKYAK 277 + ++ N + G T + + + T + L Sbjct: 541 VGDNE---VLIGGGQNGYLAVGDYDSGPFGLNASTGTPYNSTLTDDAGNATLITNLPATT 597 Query: 278 ATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSV 330 + + S+ I + + VITAD++ Sbjct: 598 IQDAASGSIDFLIGKVGSYLIQLELSAMQREGRGEIISSPR----VITADKNK 646 >UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter RepID=B9M3I8_GEOSF Length = 911 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 99/521 (19%), Positives = 195/521 (37%), Gaps = 49/521 (9%) Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVP 136 + + + + +S N +L V++ + + ++ ++ Sbjct: 438 RILVKLRNKSPFSDRKEGNLYLFEVKNPVIPAVVSGQVKEKAAPISSKIEDELLA-SPSK 496 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 D + L + ++ V + L + I K+ ++I ++ + Sbjct: 497 ESDTSELPKSVVSKQQPKKVYS---GRKVTLEFSDADIRKIFQLIA----------EVSN 543 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRI--TSL 254 L + A+D+ ++ + + +L K + + +++ P+ Q + Sbjct: 544 LNFLIADDVTGTISIKLVNVPWDQALDVILDTKGLGMLKEGNIVQIKPKAKMQSQADEEM 603 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 E E T ++ + YA T++ + D I+ Sbjct: 604 ATKKARERGMELRTEIFDVNYAAVTDIATQF------------------GTLKSDRGIIS 645 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 D +TN +++ + E + ++ LD QV++EA IVE +LGVQW + Sbjct: 646 TDARTNRVIVKDITTAIEDMRMLLKSLDTPEKQVMIEARIVEASTSFVRDLGVQWGIHYI 705 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTAL 434 + G G + A M N + L+A Sbjct: 706 DGSASVAGISRLDTGFGGQVAIAPTSGTSGPGAAVGM-----SFGKLASNIQLDMRLSAA 760 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVT 494 + ++ I++TP +VTL+NK A + G +P + S E L+VT Sbjct: 761 VTADQIKIMSTPRVVTLNNKPAKISQGASIPYQTTSAEG------TKTEFVEAALTLEVT 814 Query: 495 PQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSK 554 P + ++ ++I+ +S + S P N + +L+K GET V+GG+ D Sbjct: 815 PHITSDGSIGMKIKASNNSAGTGS----PPPINKKEATTELLIKNGETTVIGGIYVDSDT 870 Query: 555 EQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 E VP L DIPL+G LF+ + ++K L++FI P I+ Sbjct: 871 ESDKGVPFLQDIPLLGWLFKSNTKNKSKNELLIFITPKIVS 911 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 91/311 (29%), Gaps = 24/311 (7%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 + F++ADIR+ +++ + LI V GTIS++ + + I Sbjct: 517 YSGRKVTLEFSDADIRKIFQLIAEVSNLNFLIADDVTGTISIKLVN-VPWDQALDV---I 572 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 LD G ++ N ++ + +A G EL T I + D+A Sbjct: 573 LDTKGLGMLKEGNIVQIKPKAKMQSQADEEMATKKARERGMELRTEIFDVNYAAVTDIAT 632 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ---QIIH--- 196 + G + +N +I+ + I + ++K +D + +I+ Sbjct: 633 QFGTL--KSDRGIISTDARTNRVIVKDITTAIEDMRMLLKSLDTPEKQVMIEARIVEAST 690 Query: 197 -----------LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPE 245 + Y +++L + G+ + S Sbjct: 691 SFVRDLGVQWGIHYIDGSASVAGISRLDTGFGGQVAIAPTSGTSGPGAAVGMSFGKLASN 750 Query: 246 KARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSS 305 S + D + RV L A + ++ Sbjct: 751 IQLDMRLSAAVTADQIKIMS-TPRVVTLNNKPAKISQGASIPYQTTSAEGTKTEFVEAAL 809 Query: 306 GAMDNVAITAD 316 IT+D Sbjct: 810 TLEVTPHITSD 820 >UniRef50_UPI0001744674 general secretion pathway protein D n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744674 Length = 759 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 134/760 (17%), Positives = 267/760 (35%), Gaps = 114/760 (15%) Query: 1 MKGLNKITCCLLAALLMPC------AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILI 54 MK L L + + A I + +EI + GK I+ Sbjct: 1 MKAFLNRAVVLSFLALAGTLASQDIPAPSPGTRLSLQKPGAPIGEILEIYQELTGKKIIR 60 Query: 55 DPSVQGTI-SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGM- 112 DP ++G + S+ + + + +F L + GY+++ +KV+ K Sbjct: 61 DPKLEGVVLSMDTGGEMPKAQVIEFIEKSLLISGYAIVPSGEQMVKVLAFEAGKLPSTEG 120 Query: 113 ---IADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTG 169 I D+SR GD++V+ ++PL+++ A + L Q++ G ++ ++ L++T Sbjct: 121 VDMILDASRLPQGDQVVSYLLPLQHLDADEAGQALSQIITLHPYGKILAVPKASALVITE 180 Query: 170 RASTINKLIEVIKRVDVIGTEKQ-QIIHLEYASAEDLAEILNQLIS-------------- 214 ++TI +I+++++VD +E + LE A AE++A + L+ Sbjct: 181 NSTTIRAIIDLVRQVDTPSSETTTKKYFLERADAEEVARTIGTLLGLDATATATPAAARS 240 Query: 215 -----------------ESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS 257 K+V R N+L++ +I +L+K Sbjct: 241 APGDSRGVAKGGVTGGGVITAGGNGSGRTPPKLVPIARQNALLVIARPVDMAQIETLIKE 300 Query: 258 LD-------------------------------------VEESEEGNTRVYYLKYAKATN 280 D + NT+ + ++A N Sbjct: 301 FDDESPIRSFISRKVRYMDLTEFVEVAQNALLRGVVDPNGPQPLGQNTQQTSVATSRAGN 360 Query: 281 LVE---------------------VLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 + + + S S + + D Sbjct: 361 TSSDNGGRSSSYGSGLGGGSGFGGGAAAFQNETRTLEDTVLPRSQSILIGKTLVIVDPPN 420 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 ++ + L ++ ++D R Q+++ AII E G G+ W Sbjct: 421 STFYASGPPDQLRMLDDLLTQMDKRPPQIILSAIIGEFTTGKDFRFGLDWVRTLEQVNDN 480 Query: 380 TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNK 439 G + + + G V L L +++ Sbjct: 481 LVIGGINKTSTTETNAMTDLAALGNVADFLPALQGLT--VYGKIGKHLNVFLNTLEESDR 538 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS------GDNVFNTVERKTVGTKLKV 493 +L P + TL++K A+ + GQ + + + ++ + + + KL + Sbjct: 539 FHVLQRPYVTTLNHKKATISTGQQLAIPGQTYSSGIGSDPDTNGFVSNTQYIPAELKLDI 598 Query: 494 TPQVNEGDAVLLEIEQEVSSVD--SSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDD 551 P + + + V LE Q+ + ++ + P +T+T+ N V+V G T++LGGL+ + Sbjct: 599 VPHIYDKNEVKLEFVQQNLDIASYTTISGNQVPNLSTQTLSNTVVVPNGATIILGGLITE 658 Query: 552 FSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRS---LSKEKY 608 + S VP+L IPLV LF T+ + +R LM+F++P I+ DD + Sbjct: 659 RDRNNKSGVPVLSRIPLVKHLFGSTAKTKERRELMIFVQPIIVASDDSIAQKQVPIENLN 718 Query: 609 TRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAPS 648 + + QQ + L+ + D P P+ Sbjct: 719 RSFPEVQQFAEQPQPTPLLPAWDPPPAKAPARQEKKSFPA 758 >UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=cellular organisms RepID=Q3A2N4_PELCD Length = 874 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 106/451 (23%), Positives = 174/451 (38%), Gaps = 48/451 (10%) Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 ++ + + N+L L G S +N +I DV G ++I + + A D Sbjct: 472 KEYVGQKISLVFDDADIRNILQLIGEVSDLN----IIVGDDVKGNMTLRLIDVPWDQALD 527 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESE 264 L + +L G I+ + + + + E+ E Sbjct: 528 LVLEIRELGKLQEGNV-----------------LRILPLAKIRQMQQEQFAAARAKEKLE 570 Query: 265 EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVI 324 + T + + Y LVE D + D + L++ Sbjct: 571 DLVTDLIPVSYTDVEGLVEACKKRL------------------SDRGKVIGDVRDKKLIV 612 Query: 325 TADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGL 384 T SV + ++ LD QVL+EA IVE +LGV W G Sbjct: 613 TDIPSVVADIKQLVRLLDTPVRQVLIEARIVEASATFSRDLGVNWGISYQHNPGSDVEG- 671 Query: 385 PIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILA 444 +A+ G+ ++ + + S G + L AL + I++ Sbjct: 672 --NDASIGMGGTLVGIPVSPGEVSSGIVSGLTFGQVGVDKTVLDLRLAALEQSGHGRIVS 729 Query: 445 TPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVL 504 TP + TL+ + A G ++P LS S E K LKVTP++N +V+ Sbjct: 730 TPRVSTLNGEEAEVAQGTEIPYLSVSDDG------TKTEFKKAELSLKVTPEINPDGSVI 783 Query: 505 LEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLG 564 LEIE + S +++ + P +T+ VLVK GET V+GG+ E S VP L Sbjct: 784 LEIEAKNDSRGANTGLSEAPAIDTKRATTKVLVKDGETTVIGGIFIQDKSESDSGVPWLM 843 Query: 565 DIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 ++P++G LF+ S +R L+VFI P I+ Sbjct: 844 NVPILGHLFKSKSVSEERRELLVFITPRILD 874 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 72/179 (40%), Gaps = 6/179 (3%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ F++ADIR ++++G+ I++ V+G +++R D + +L+ Sbjct: 476 GQKISLVFDDADIRNILQLIGEVSDLNIIVGDDVKGNMTLRLID-VPWDQALDL---VLE 531 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 + + N + + + A + ++LVT ++P+ L Sbjct: 532 IRELGKLQEGNVLRILPLAKIRQMQQEQFAAARAKEKLEDLVTDLIPVSYTDVEGLVEAC 591 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 ++ + G V+ LI+T S + + ++++ +D + + ASA Sbjct: 592 KKRLS--DRGKVIGDVRDKKLIVTDIPSVVADIKQLVRLLDTPVRQVLIEARIVEASAT 648 >UniRef50_B5YDZ7 Bacterial type II and III secretion system protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDZ7_DICT6 Length = 1256 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 128/595 (21%), Positives = 229/595 (38%), Gaps = 65/595 (10%) Query: 10 CLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDT 69 +++ L+ + + ADIR+ + +G+ +ID V G I + N Sbjct: 718 AVVSRELLTVEREGDKIYVSCDLRGADIREVLRELGKKADINFVIDQKVTGQIDLYLNKV 777 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 L+I+ G IT ++ V P +A T+I Sbjct: 778 E-----LPEVLNIIQRAGKLSITTEDKVTYVKPYEEKVAVPVEVA-----------KTKI 821 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 L+ + D+ + ++ ++ + + + +LI G+ + L E+I R+DV Sbjct: 822 YALKYITLSDIERVGGSLVKN---LSLSYDDKTRLLIAQGKEDDLKVLDELISRIDVEKK 878 Query: 190 EKQQIIHLE---------YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 E L Y S + + +++ E K+ + ++ K+ + + + Sbjct: 879 EAVVSRELLTVEREGDKIYVSCDLRGADIREVLRELGKKADINFVIDQKVTG--QIDLYL 936 Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR 300 I S + S+ E+ + AT + KLK + Sbjct: 937 NKVELPETLDILSKIASISFEKVGSVTFVKPFTTAVVATKEGAPIVTKEYKLKYISLDTL 996 Query: 301 KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG 360 K SG +V D+ + L++ + ++IA+LD QV ++ ++EV Sbjct: 997 KSVVSGIAKDVNFYYDQTSGLLLVQGPADQVSSVESMIAKLDKPTPQVKIDVQVIEVSRE 1056 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 N ++G++W ++ + + + + Sbjct: 1057 NIKDIGIEWGTGSISTGLQITANVGWQDLRISIINP------------------------ 1092 Query: 421 GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN 480 G + AL S NK ILA PS+ T+ K +G VP++S + Sbjct: 1093 ----GQISANIKALESQNKAKILAQPSMTTVSGKSTRIMIGDRVPLISYDAQGN-----R 1143 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTG 540 V VG L VTP VN + + +VS++ P +TR Q V +K G Sbjct: 1144 QVSFVDVGIILNVTPTVNADGTITANLNPQVSTIQGY--VQDVPIISTREAQTIVNLKNG 1201 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 ET+ LGGLL E +SKVPLLGDIP++G+LF+ ++ +R L++ I P II Sbjct: 1202 ETLALGGLLRQEEIESMSKVPLLGDIPILGELFKARKIQKVERELIILITPKIIE 1256 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 19/165 (11%) Query: 25 NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILD 84 ++ +F+ A+IR ++ +GQ G I+ D VQG ISV ++ + L Sbjct: 309 QQRISVSFDRAEIRDVLKAMGQLAGLNIITDIGVQGRISVYL-KDIPFKDAFYAL---LA 364 Query: 85 LYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLL 144 I + K +LVT++ L+ ++ +L Sbjct: 365 SSDLGYIQQGEIIIVANLDKLQKIE------------SRDLVTKVYQLKYFESQKAKDIL 412 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 + N LI++ S K+ IK +D+ Sbjct: 413 S---KTSKTAVFDSDDSRNWLIVSAPPSEFAKIESTIKTLDIPSE 454 Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 79/207 (38%), Gaps = 21/207 (10%) Query: 148 MDAGSVGNVVHYEPSNVLILTGR-----ASTINKLIEVIKRVDVIGTEKQQIIHLEYASA 202 + S G + V++++ S I ++ E++K +D IG L+ + Sbjct: 525 LIIRSSGYIYEVREGGVILVSAPKIEGAPSPIIEIKELVK-IDKIGDVFYVTASLKKSDI 583 Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLLKSLDVE 261 D+ + + + D + + + + + + ++++ L Sbjct: 584 RDVLQEIAS-------------KTDLNFIVDPKVSGTVDLFVNKVPLDEVLTIIQRLANF 630 Query: 262 ESEE-GNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTN 320 + E+ G T K + + +V++ LK + N++++ D++T Sbjct: 631 DMEKVGKTYYIRPKEVQTATVPQVISTKLYVLKYITLQDILRVGGSLVKNLSLSYDDKTR 690 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQ 347 L+ + + L +I+R+D+ + + Sbjct: 691 LLIAQGKEDDLKVLDELISRIDVEKKE 717 Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 65/210 (30%), Gaps = 25/210 (11%) Query: 141 APLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII-HLEY 199 ++ ++ V + + V + + ++ D E Sbjct: 262 QKVVTEVPKVEEAPKVTEVKTTTVEEKPEEKPKEEIVSKPVEVKDKFQQRISVSFDRAEI 321 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLL---- 255 L L + Q + K + K +++ + + ++ Sbjct: 322 RDVLKAMGQLAGLNIITDIGVQGRISVYLKDIPFKDAFYALLASSDLGYIQQGEIIIVAN 381 Query: 256 -KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 L ES + T+VY LKY ++ ++L+ S+ + Sbjct: 382 LDKLQKIESRDLVTKVYQLKYFESQKAKDILSKTSKTAVFDS------------------ 423 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIR 344 D+ N L+++A S K+ + I LDI Sbjct: 424 -DDSRNWLIVSAPPSEFAKIESTIKTLDIP 452 >UniRef50_Q07N78 General secretion pathway protein D n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07N78_RHOP5 Length = 789 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 135/673 (20%), Positives = 239/673 (35%), Gaps = 101/673 (15%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFS 71 AA + Y NF D+ + I+G L LID V G I++ S+ Sbjct: 133 AAAGGAIIPSNDGRSYQLNFEATDVAAVGKAILGDILNANYLIDSRVSGQINLTSSQAVP 192 Query: 72 QQEYYQFFLSILDLYGYSVITLD------------------------------------- 94 + + L ++ Sbjct: 193 RSSLIPLLETALLSINATLSRDGTIYRISPVAEPRSLGNIGFQAATDGYGTTVIPARYVP 252 Query: 95 --------------NGFLKVVRSANVKTSPGMIADSSRPGVGDELV---------TRIVP 131 +G +KV ++N+ G A+ +V I+P Sbjct: 253 AANLAKILDGLGGRSGTVKVEPTSNLLMIQGTAAERRALLGAAAMVDVDWMRTKSVAILP 312 Query: 132 LENVPARDLAPLLRQMMDAGSVG------NVVHYEPSN-VLILTGRASTINKLIEVIKRV 184 +E+ + L +++ G G + N VL ++ R I+ + + + R+ Sbjct: 313 IEHAAPETVIAELNKILGTGEGGLSQNVVVLQPISRLNAVLAVSSRRDAIDHVTKWVLRL 372 Query: 185 DVIGTE--KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 D ++ L+YA A+ +A LN++ G + A + + N+ + Sbjct: 373 DAADDNAAGVKVYRLKYAQAKTVAATLNRMFGVRTGGTG---QADADQLEPGQDNTDGTN 429 Query: 243 GPEKARQR-ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 G + A + T+ + S G L + +K Sbjct: 430 GEKVATAQPATTSGSTAPTPASNAGGVSSTNL----VKTSFGADSSAGQKPTGADDATST 485 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 S SG V +T D N L + + I +D QV +E I E+ + Sbjct: 486 DSRSGRSGKVRVTPDVTNNVLFVETTPQTYAVVERAIREMDRFPTQVNIEVTIAEITLTS 545 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 L GVQ+ K+ I +G + Sbjct: 546 ELQYGVQFFLKSGNFSAGLGGASGIPLRTSYPGLNLVSGALL------------------ 587 Query: 422 FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS-GDNVFN 480 D V+L ALA +L++PS+V LD + A VG +P+L+ T++ + Sbjct: 588 ----DPQVVLDALAQFTSVKVLSSPSLVVLDRQPAVLQVGDQIPILTRQLTSAESTATVS 643 Query: 481 TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTG 540 V+ K G L V P+VN V L +EQ++S+V S+ TL PT + R +++ + V +G Sbjct: 644 NVDLKDTGIILNVLPRVNANGLVTLNVEQQISNVVSTQPDTLTPTISQRRVKSVISVSSG 703 Query: 541 ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 +TV+L GL+ D + +P++ I ++ L ++ L++FIRP II Sbjct: 704 QTVLLAGLITDGQNINRNGLPVVSQIKVLSDLLSSHDRTASRTELIIFIRPKIIASGQDA 763 Query: 601 RSLSKEKYTRYRQ 613 + +++E R R Sbjct: 764 QHVTEEFLGRMRS 776 >UniRef50_C6Q9T0 General secretion pathway protein D n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9T0_9RHIZ Length = 773 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 125/591 (21%), Positives = 229/591 (38%), Gaps = 40/591 (6%) Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 +S+ + S + + ++ ++ N L + + S I Sbjct: 193 VSIFALRYVSTEAMMRMLDGLMVKQEDLRASVFNNMLFIRGPGQSRQSIVEIVSMFDVDW 252 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVGN----VVHYEPSNVLILTGRAST-INK 176 I L+N D+ L+Q+ G N +++ S ++K Sbjct: 253 MKGQSAGIFKLDNASPDDVIRELKQVFQTDRQGRGLVKFQTIGRLNAVLVLAPRSQTVDK 312 Query: 177 LIEVIKRVDVIG--TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADK 234 + E I R+D G + + +E A+DLA +L + K VA Sbjct: 313 VGEWISRLDHSGADDDNYYVYRVENGRAKDLARLLMAAFTGGGAAGGSGRGAEEKEVA-P 371 Query: 235 RTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV-----EVLTGVS 289 + S + + + T L A+ + ++ Sbjct: 372 TLAASRTSSGSSFGSSSSGTGSNSNSGPLSGSTTGSTSLGGGDASGSSNGSPLKGAPTLA 431 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 ++ + S++ + D V +T DE+ N L+I A + +K+ ++ R+D QVL Sbjct: 432 SAEEEPADEGPQSSAATSSDQVRVTPDERNNKLLIKASERNYKKILQILHRVDQPPLQVL 491 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW 409 + A + EV L GVQ+ + + G TS A Sbjct: 492 INATLAEVTLNKNLQYGVQFFLQKNHGKSGG------------------IGFSTSDALAI 533 Query: 410 DMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 + AG D V+L ALA I+++PS+V L N+ A VG VP+++ Sbjct: 534 APVMPGLNLIAGNIGSDPRVILDALAKETAVRIVSSPSVVVLHNQQAILEVGDQVPIITR 593 Query: 470 SQTTSGDNVFNT---VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS-----NST 521 + + T +E K G L VTP++N V +E++QEVS+V ++S ++ Sbjct: 594 EAQSVINPDSPTVNEIEFKNTGVILNVTPRINSNGLVTMEVQQEVSAVQNTSGQSDAATS 653 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ-LFRYTSTER 580 L PT + R + + + V++G+ VVLGGL+ + S +P++ IP +G L T R Sbjct: 654 LTPTISQRRVTSTIAVQSGQMVVLGGLIREEVSRSKSSIPVINKIPYLGDVLGGETDNGR 713 Query: 581 AKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED 631 + L+VFIRP +IR+ + + ++ + ++ + Sbjct: 714 TRTELVVFIRPIVIRNPEDASNAAEALRAGMASLAPRPTAWDARIESREDP 764 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 111/279 (39%), Gaps = 14/279 (5%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEI-VGQHLGKTILIDPSVQGTISVRSNDTFS 71 A Y NF++ D+ + V++ + LG T + D ++G +S+ + + Sbjct: 77 AVEARTPGISQNASGYELNFSDTDLSELVKVVLKDTLGITYVFDSHIEGRVSISTGGPVT 136 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIAD--SSRPGVGDELVTRI 129 + E SIL + + ++NG +VV A+ + D VG I Sbjct: 137 RAELISILESILATNH-AALLIENGVYRVVPEADARQQGISAFDYVRESREVGAGYGVSI 195 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 L V + +L +M + +N+L + G + ++E++ DV Sbjct: 196 FALRYVSTEAMMRMLDGLMVKQEDLRASVF--NNMLFIRGPGQSRQSIVEIVSMFDVDWM 253 Query: 190 EKQQ--IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP-EK 246 + Q I L+ AS +D+ L Q+ + K R N++++ P + Sbjct: 254 KGQSAGIFKLDNASPDDVIRELKQVFQTDRQGRGL-----VKFQTIGRLNAVLVLAPRSQ 308 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVL 285 ++ + LD +++ N VY ++ +A +L +L Sbjct: 309 TVDKVGEWISRLDHSGADDDNYYVYRVENGRAKDLARLL 347 >UniRef50_A6CD16 General secretion pathway protein D (Precursor) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CD16_9PLAN Length = 1307 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 135/653 (20%), Positives = 249/653 (38%), Gaps = 68/653 (10%) Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 I + + S+ + + +I ++ + L +A I + Sbjct: 609 KIDLDQSQAISRVKIFPLKNAIAADLAETLNSTLQSVLN-PAAAQTAGLGTNIGGAGGEA 667 Query: 121 VGDELVTRIVPLENVPAR-DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 R V LE + + +LR + A V+ +N L++T ++ + Sbjct: 668 AQQLQEARSVVLEFLSQEGTQSRVLRSGLLADIR--VIADPRANTLVVTAPKDSLELIGA 725 Query: 180 VIKRVDVI--GTEKQQIIHLEYASAEDLAEILNQLISE-----------SHGKSQMPALL 226 +I + D + ++ L+ A AE + +L S + L+ Sbjct: 726 LINQFDARVSSVAELKVFTLKNADAESMVTLLQSTFSADNQQTDLGIQIAGVNDANSNLI 785 Query: 227 SAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT 286 K D+RTNS++ G A Q + ++L LD +S + T V LK ++ + Sbjct: 786 PLKFSVDRRTNSVVAQGGADALQIVEAILLKLDGADSRKRETTVIQLKNTPVADVSVAIN 845 Query: 287 GVSEKLKDEKGNARKPSSSGAMDNVAITADEQ--TNSLVITADQSVQEKLATVIARLDIR 344 + + SS + + + N+L+I+A E+++ ++ +LD Sbjct: 846 EFLDTQRALIAQDPDLISSFELLEREVIVVPEAINNNLIISATPRYFEQISNLVKQLDKE 905 Query: 345 RAQVLVEAIIVEVQDGNGLNLGVQWANKNV--------------GAQQFTNTGLPIFNAA 390 QV+++A+IVEV+ N GV+ ++ + N Sbjct: 906 APQVIIQALIVEVELDNDDEFGVELGLQDSLLFNRSIIDNVLTVQQTITGQNNVTQTNQT 965 Query: 391 QGVADYKKNGGITSANPA-----------------------WDMFSAYNGMAAGFFNGDW 427 + S NP + + G+ + Sbjct: 966 IVSQEATPGFLFNSINPLGTNNTNNVSNTAGQALSNFSLQRGNSDLGFGGLVLSASSESV 1025 Query: 428 GVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTV 487 +L+ ALA+ +L+ P I T+DN A VGQ VPV++G T+ + +++ Sbjct: 1026 SILIRALAAKRNVHVLSRPQIRTVDNVTAQIQVGQIVPVVNGVSVTAVGSANPVIQQSEA 1085 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS----------NSTLGPTFNTRTIQNAVLV 537 G L VTP+++ +++E + E S + SS N P N +Q V V Sbjct: 1086 GIILTVTPRISPDGNIVMETQAEKSDFNGSSVPIFTDATTGNVVESPIKNITQVQTTVSV 1145 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 G+TVVLGG++ + KVP LGDIPL+G FRY + ++ L+VF+ P IIR+D Sbjct: 1146 PNGQTVVLGGMITESDTTIERKVPWLGDIPLIGIPFRYDYSSTRRKELLVFLTPRIIRND 1205 Query: 598 DVYRSLSKEKYTRYRQEQQQRIDGK-SKALVGSEDLPVLDENTFNSHAPAPSS 649 + + + R + ++ V + + E P P++ Sbjct: 1206 ADSEFIKQVESERIHLQVEKAEQMHGPIFAVPPGEPEFIPEGE-GLLEPIPTT 1257 Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 75/456 (16%), Positives = 154/456 (33%), Gaps = 77/456 (16%) Query: 12 LAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFS 71 AL + A ++ + I Q + + Q + + Sbjct: 317 ATALKLDQAAKGFSQSIQLVIGSPQIGQVAQKLHQQTN-------------TSTAPQRLP 363 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP 131 + Y F+S D ++ +V + A + PG + +P D Sbjct: 364 VKTYSDNFVSPRDQQ------INQLRQRVDQIAYQEQQPGAAQNPQQPQPAD-------- 409 Query: 132 LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE- 190 + L + D N+ VLIL G+ +N L+++IK ++ + Sbjct: 410 -KPAEVEKQRSLPELLQDLSGNVNIESVPDLGVLILRGKDEDVNALMKIIKELEKLSEGT 468 Query: 191 --KQQIIHLEYASAEDLAEILNQLISE-SHGKSQMPALLSAKIVADKRTNSLIISGPEKA 247 +++L + ++ LAE+LN + + ++ + KI+ + N+L+I P+ Sbjct: 469 RPDIHLLNLRHVNSTALAELLNGVYEDLVTLRAIQGQIQKIKIIPLVKPNALLILAPDTD 528 Query: 248 RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGA 307 I L + LD + V+ LK A A+ + + + G Sbjct: 529 MPSILKLAEELDQPVNPLTEFGVFQLKSASASQVATTIREFYNER------------GGL 576 Query: 308 MDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGV 367 + ++ + +TNS+++ A +++A +I ++D+ ++Q + I Sbjct: 577 GTRILVSPNIRTNSIIVQAQPRDMQEVAALIQKIDLDQSQAISRVKI------------- 623 Query: 368 QWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDW 427 + KN A T + A + G T+ A + A Sbjct: 624 -FPLKNAIAADLAETLNSTLQSVLNPAAAQTAGLGTNIGGAGGEAAQQLQEARS------ 676 Query: 428 GVLLTALASNN------------KNDILATPSIVTL 451 V+L L+ ++A P TL Sbjct: 677 -VVLEFLSQEGTQSRVLRSGLLADIRVIADPRANTL 711 Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 89/296 (30%), Gaps = 22/296 (7%) Query: 28 YGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYG 87 N A + ++ V + T+++D +G S + E +Q L+ G Sbjct: 80 ISLNHVQATWAKVLKQVAEQSELTLVMDVVPKGFFSRIDKRPHTLSETFQILNRELEPKG 139 Query: 88 YSVITLDNGFLKV-VRSANVKTSPGMIADSSRPGVGDEL-VTRIVPLENVPARDLAPLLR 145 + ++ D+ + + +R A K + + R G I +E++ + Sbjct: 140 FRLLQKDSFLIVLDLREAKAKYIRPTVQSADRTPEGTRPGKNDIRQIEHLEQTE------ 193 Query: 146 QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDL 205 P N + + K I++ + + ++ ++ Sbjct: 194 --------------NPQNPVTQADVPARFEKSARKIQQKEATPQVATFTVQPRTLNSTEI 239 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEE 265 +V ++ + +I + + ++ Sbjct: 240 LRQFYHAFETRAELQGEGPNGLPGLVVFNSQEESLVDEQTQEPLKIINTQIDFRIGIDKQ 299 Query: 266 GNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNS 321 N V+ +KA L + + K + + S + VA +QTN+ Sbjct: 300 NNELVFEASPSKAQALKATALKLDQAAKGFSQSIQLVIGSPQIGQVAQKLHQQTNT 355 >UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein pilQ n=31 Tax=Bacteria RepID=PILQ_NEIG1 Length = 723 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 84/404 (20%), Positives = 173/404 (42%), Gaps = 13/404 (3%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS--L 254 + +++ ++ + + + + ++ A+ + ++ +++ P L Sbjct: 324 MNIVASDSVSGKMTLSLKDVPWDQALDLVMQARNLDMRQQGNIVNIAPRDELLAKDKAFL 383 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 D+ + ++ + LKY +L + + ++ ++ Sbjct: 384 QAEKDIADLGALYSQNFQLKYKNVEEFRSILR-------LDNADTTGNRNTLVSGRGSVL 436 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 D TN+L++T +SV EK +I LD+ QV++EA IVE DG +LGV++ Sbjct: 437 IDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQVMIEARIVEAADGFSRDLGVKFGATGR 496 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTAL 434 + T + G K T N + + +G + L+A Sbjct: 497 -KKLKNETSAFGWGVNSGFGGGDKWEAQTKINLPVAAAANSISLVRAISSGALNLELSAS 555 Query: 435 ASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVT 494 S +K LA P ++T + K A G ++P + + G++ E K L VT Sbjct: 556 ESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTVTTASGGGNS--TNTELKKAVLGLTVT 613 Query: 495 PQVNEGDAVLLEIEQEVSSVDS-SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 P + +++ ++ S +S + +T+++ +V+ G T+++GG+ ++ + Sbjct: 614 PNITPDGQIIMTVKINKDSPAQCASGNNTILCISTKSLNTQAMVENGGTLIVGGIYEENN 673 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 ++KVPLLGDIP++G LF+ + +R L++FI P II Sbjct: 674 GNTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFITPRIIDTA 717 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 13/183 (7%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 + +F + +IR ++I+ + G I+ SV G +++ + Sbjct: 293 APKTFTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVSGKMTLSL-KDVPWDQALDL 351 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 ++ + N R + + L ++ L+ Sbjct: 352 ---VMQARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVE 408 Query: 139 DLAPLLRQMMDA---------GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 + +LR G+V+ +N LI+T S I K ++I +DV Sbjct: 409 EFRSILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQ 468 Query: 190 EKQ 192 + Sbjct: 469 QVM 471 >UniRef50_Q1K2X4 Type II and III secretion system protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2X4_DESAC Length = 727 Score = 300 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 108/553 (19%), Positives = 202/553 (36%), Gaps = 56/553 (10%) Query: 50 KTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTS 109 + ++ ++G + + S+ F ++ ++ + + + V+ S Sbjct: 224 RNVMFSAKMKGLV----QYSVSRNGSQLVFSTVDGVFAETAPSALDSVYVPVQPTKAAQS 279 Query: 110 PGMIADSSRPGVGDELVTRIVP--LENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLIL 167 G++ S P + V L + A LL D + + VL Sbjct: 280 NGIVETISDPAYAYDENMDDVSQVLNRIEGESAAGLLSATADKDAPKVYTGEPVTLVLDD 339 Query: 168 TGRASTINKLIEV-----IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQM 222 + + E+ I DV G ++ + + A DL + QL + + G Sbjct: 340 ADIRKVMQLIAEISNLNIILSDDVKGKVSLRLHDVPWDQALDLILDVKQLGTITQGNVVR 399 Query: 223 PALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 L + L + D+++ EE T ++ + Y + Sbjct: 400 ILPLGT-----------------IKKMEAERLKATKDIKKLEETRTEIFVINYKDTEAIE 442 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLD 342 +V+ V + + E + +++ S E++ +I +LD Sbjct: 443 DVIDDVL------------------SNQGEVQLIEGSKKIMVNDIPSKLEEIRMLINQLD 484 Query: 343 IRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGI 402 QVL+EA IVE G+ W + + G+ V Sbjct: 485 EPVKQVLIEARIVEADTSAEQTFGIHWGFEFDNDSGSSGGGIGSSLDNAVVGLGGNFITP 544 Query: 403 TSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQ 462 TSA + G + L+AL S+ ++++P ++ LD + A G Sbjct: 545 TSATDGLGTALTFG--RVGLDTIVLDLQLSALESSGGGKVISSPKVMALDGETARIGQGT 602 Query: 463 DVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL 522 ++P + S T E K L+VTP +N + +LLEI SS T Sbjct: 603 EIPYKTTSDNG------TTTEFKKAELALEVTPLINPDNTILLEILATNSSPG--VAYTD 654 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 G NT+ + +L+K GET V+GG+ + + S P L D+P +G LF+Y ++ + Sbjct: 655 GVAINTKEAETKLLLKNGETTVIGGIYTENEQNSDSGTPYLKDLPFIGNLFKYKTSSNDR 714 Query: 583 RNLMVFIRPTIIR 595 L++F+ P I+ Sbjct: 715 TELLIFLTPHIVD 727 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 8/202 (3%) Query: 6 KITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVR 65 L A E ++ADIR+ ++++ + I++ V+G +S+R Sbjct: 311 SAAGLLSATADKDAPKVYTGEPVTLVLDDADIRKVMQLIAEISNLNIILSDDVKGKVSLR 370 Query: 66 SNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL 125 +D + ILD+ IT N + K + + +E Sbjct: 371 LHD-VPWDQALDL---ILDVKQLGTITQGNVVRILPLGTIKKMEAERLKATKDIKKLEET 426 Query: 126 VTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD 185 T I + + ++ ++ + G V E S +++ S + ++ +I ++D Sbjct: 427 RTEIFVINYKDTEAIEDVIDDVLS--NQGEVQLIEGSKKIMVNDIPSKLEEIRMLINQLD 484 Query: 186 VIGTEKQQIIHLEYASAEDLAE 207 + +I A+ AE Sbjct: 485 EPVKQV--LIEARIVEADTSAE 504 >UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vibrionaceae RepID=C9QNG5_VIBOR Length = 563 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 101/397 (25%), Positives = 182/397 (45%), Gaps = 24/397 (6%) Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLD 259 ++ ++ L + + + +L K + + +++++ P E + L K+ Sbjct: 185 SDSVSGNLTLRLDGLPWQQVLDVILQVKGLDKRVMDNVVLIAPQAELDARHREELEKARL 244 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 E E + + +K+AKA+ + ++ G + + S A++ DE+T Sbjct: 245 EAELGELRSEIVKVKFAKASEIASMIGG-------------EGAISMLSSRGALSVDERT 291 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 N+L+I Q + + +I+ LDI QV +EA IV V +GN LGV+W N Sbjct: 292 NALLIRDLQPNIDVIQELISALDIPVKQVQIEARIVTVHEGNLDELGVRWGYHNTNGS-- 349 Query: 380 TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNK 439 T+ G I + G + A + + S +A + + L+AL +K Sbjct: 350 TSLGSSIEDNVFGAVPIDDMLNVNLAATSVNASSIAFQVAKLGSDMLLDLELSALQRESK 409 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNE 499 +++++P ++T + K A G ++P L S + + +V K LKV PQ+ Sbjct: 410 AEVISSPRLITTNKKPAYIEQGTEIPYLESSSSGA-----TSVAFKKAVLSLKVVPQITP 464 Query: 500 GDAVLLEIEQEVSSVDSSSNSTLG--PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQV 557 + ++L++ + G NT+ I VLV GETVVLGG+ + V Sbjct: 465 DNRLVLDLSVTQDRPGDIVKTGTGEAVAINTQRIGTQVLVDNGETVVLGGIFQHSVTDAV 524 Query: 558 SKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 KVP+LGD+PL+G LFR T + K L++F+ P ++ Sbjct: 525 DKVPMLGDLPLLGALFRRTYQKMGKSELLIFVTPKVV 561 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 81/193 (41%), Gaps = 10/193 (5%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A E ++ NF + +R ++++ + +++ SV G +++R + Q+ Sbjct: 149 PAPEQEAKKISINFQDIPVRHVLQLIADYNDFNLVVSDSVSGNLTLRLDG-LPWQQVLDV 207 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 IL + G +DN L ++ + + EL + IV ++ A Sbjct: 208 ---ILQVKGLDKRVMDNVVLIAPQAELDARHREELEKARLEAELGELRSEIVKVKFAKAS 264 Query: 139 DLAPLL---RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE---KQ 192 ++A ++ + S G + E +N L++ I+ + E+I +D+ + + Sbjct: 265 EIASMIGGEGAISMLSSRGALSVDERTNALLIRDLQPNIDVIQELISALDIPVKQVQIEA 324 Query: 193 QIIHLEYASAEDL 205 +I+ + + ++L Sbjct: 325 RIVTVHEGNLDEL 337 >UniRef50_Q0VMB7 Fimbrial assembly protein pilQ n=3 Tax=Gammaproteobacteria RepID=Q0VMB7_ALCBS Length = 723 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 93/444 (20%), Positives = 175/444 (39%), Gaps = 59/444 (13%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ + + + + +L K + ++ ++++ P E A + L Sbjct: 300 LNLVASDTVDGRITLRLQNVPWDQALELILKTKGLDKRQVGNVLLVAPADEIAAREQLEL 359 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 +E T + YA A+ L E+++ NA + ++ Sbjct: 360 ESQKKIEALAPLRTEYININYANASELKELIS-----------NAGGKGEALVSGRGSVV 408 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 D++TN+L++ Q+ +++ +I +LDI QVL+EA +V + GV+W Sbjct: 409 VDQRTNTLIVQDTQAKLQEIRELIDQLDIPVQQVLIEARVVVATNDVTDEFGVRWGGLGF 468 Query: 375 GAQQFTNTGLPIF--------------NAAQGVADYKKNGG------------------- 401 + G N +A GG Sbjct: 469 DTESMLEDGRTFGVSGRLQSLRNLHQTNIDATIAYPDTVGGHPGDVEFGPDDFQFQEAEN 528 Query: 402 ----ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 I S + +G + L+AL + +++ATP ++T D + A Sbjct: 529 DDDLIVDLGVDSASASRFAVGFTSLASGLIELELSALEAEGHGELVATPKVLTADQQPAV 588 Query: 458 FNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS 517 GQ VP + + + +++ +L+VTP + +++ ++ S S Sbjct: 589 IASGQQVPFEIATSSGA-----TSIDFVEAELRLEVTPHITPDGNIIMMLKVNNDSFSSD 643 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 ++ NT ++ +VLV GETVVLGG+ V+K P LGD+P +G LFR T Sbjct: 644 GSA----AINTNRVETSVLVNDGETVVLGGIFQQEKINSVTKTPFLGDLPWIGALFRKTV 699 Query: 578 TERAKRNLMVFIRPTIIRDDDVYR 601 K+ L++FI P +++D R Sbjct: 700 NRDNKQELLIFITPRLMKDALANR 723 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 18/299 (6%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 A E+ NF + ++R ++++ G ++ +V G I++R + + + Sbjct: 270 AFQYTGEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVDGRITLRLQN-VPWDQALEL- 327 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 IL G + N L + + L T + + A + Sbjct: 328 --ILKTKGLDKRQVGNVLLVAPADEIAAREQLELESQKKIEALAPLRTEYININYANASE 385 Query: 140 LAPLLRQMMDAG-----SVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 L L+ G G+VV + +N LI+ + + ++ E+I ++D+ + Sbjct: 386 LKELISNAGGKGEALVSGRGSVVVDQRTNTLIVQDTQAKLQEIRELIDQLDIPVQQV--- 442 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 L A + G + + + S + I + Sbjct: 443 --LIEARVVVATNDVTDEFGVRWGGLGFDTESMLEDGRTFGVSGRLQSLRNLHQTNIDAT 500 Query: 255 LKSLDVEESEEGNTRV----YYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD 309 + D G+ + + A+ + + V GV +SG ++ Sbjct: 501 IAYPDTVGGHPGDVEFGPDDFQFQEAENDDDLIVDLGVDSASASRFAVGFTSLASGLIE 559 >UniRef50_D0SET7 Type IV pilus biogenesis and competence protein pilQ n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SET7_ACIJO Length = 390 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 93/404 (23%), Positives = 176/404 (43%), Gaps = 26/404 (6%) Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSL- 258 +++ + + + + + ++ K + +R ++I P + Sbjct: 2 VASDTVQGNITLRLKDVPWDQALDIIMKTKNLDKRRNGNVIWIAPVAELIKSEEEEAKAI 61 Query: 259 -DVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS----SGAMDNVAI 313 + T L YAK+ +++++L + E S S + Sbjct: 62 AQSIKLSPIQTDYIQLSYAKSADVLKLLEDSRDSKGGESNRTAGSDSLALESLLSARGSA 121 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 +D +TN+L+I Q +K+ +I LD+ QV+VEA IV LG++W+ K Sbjct: 122 VSDSRTNTLIINDRQQNIDKIRRMIDLLDVAVKQVMVEARIVTASTDFSRELGIKWSAKK 181 Query: 374 VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTA 433 +G N+ D++ + + + A + +N + + L+A Sbjct: 182 LG------------NSPVWGGDFQPSFDL-GVDLATNTAGTFNFGLLKISDYMLNLELSA 228 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 L ++ ++L+ P ++T D + A G ++P + S T E + KL+V Sbjct: 229 LQADGHGEVLSAPKVLTGDKQKAYILRGTEIPYQTWSATEGLKT-----EFRAANLKLEV 283 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 TP + V + ++ E +V + +++ G NT ++ VLV GETVVLGG+ DD Sbjct: 284 TPSITPDGKVQMALKIEKDTVGTLTSA--GYLINTNELETNVLVDDGETVVLGGIFDDIK 341 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 + Q KVP GD+P+VG LF+ + A+ L++F+ P I+ D Sbjct: 342 QNQYEKVPFFGDLPVVGALFKNNTRSSAQTELLIFVTPRIVNDS 385 Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 24/172 (13%) Query: 52 ILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPG 111 ++ +VQG I++R + I+ N + +K+ Sbjct: 1 MVASDTVQGNITLRL-KDVPWDQALDI---IMKTKNLDKRRNGNVIWIAPVAELIKSEEE 56 Query: 112 MIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA--------------------G 151 ++ + T + L + D+ LL D+ Sbjct: 57 EAKAIAQSIKLSPIQTDYIQLSYAKSADVLKLLEDSRDSKGGESNRTAGSDSLALESLLS 116 Query: 152 SVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAE 203 + G+ V +N LI+ R I+K+ +I +DV + + AS + Sbjct: 117 ARGSAVSDSRTNTLIINDRQQNIDKIRRMIDLLDVAVKQVMVEARIVTASTD 168 >UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS Length = 700 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 103/505 (20%), Positives = 198/505 (39%), Gaps = 44/505 (8%) Query: 99 KVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENV--PARDLAPLLRQMMDAGSVGNV 156 ++ + + V +++P NV A + + + Sbjct: 222 RIGNDTQITIRNQGSWEHKVTQSNGRHVIQVLPTRNVAESAANGKRAQQNFTGKRISLDF 281 Query: 157 VHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISES 216 + E VL + + S +N + ++ + + + + Sbjct: 282 QNIEVRTVLQILAQESGMNIVA-----------------------SDSVQGKMTLSLKDV 318 Query: 217 HGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT--SLLKSLDVEESEEGNTRVYYLK 274 + ++ A+ + ++ ++I P + ++E+ ++ + LK Sbjct: 319 PWDQALDLVMDARNLDMRKHGNIINIAPRQELLDKDRNEAKARREMEDLGALYSKTFQLK 378 Query: 275 YAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKL 334 Y +L +++ N + D TN+L++T +QSV +K Sbjct: 379 YKNVEEFKNILRLSDSPNTNDRSN-------ILSTRGSALIDPATNTLIVTDNQSVIQKF 431 Query: 335 ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVA 394 +I LD+ QV+VEA IVE DG +LGV++ + GA + Sbjct: 432 ERLIDELDVPAKQVMVEARIVEAADGVSRSLGVKFGARRNGATSWGGDWNNSIALNNRST 491 Query: 395 DYKKNGGITSANPAWDMFSAYNGMAAGFF----NGDWGVLLTALASNNKNDILATPSIVT 450 + + G + NP ++ A + G G+ L+A+ + N ++TP ++T Sbjct: 492 NSGTSTGGVAFNPNVNLPVASATSSISVIHSWAAGALGLELSAMETENLTKTISTPRVLT 551 Query: 451 LDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQE 510 D K A G +P + S K LKVTP++ ++L+I Sbjct: 552 QDRKEAEIRQGTQIPYTTRSSDGDSSTA-----FKDAVLSLKVTPRITPDSKIILDIAIN 606 Query: 511 VSSVDSSS-NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLV 569 D ++ N+ P TR ++ +++ G T+V+GG+ + VSKVPLLGDIP++ Sbjct: 607 KDEPDYNNVNAEGEPGIVTRAVKTQAMIEDGATLVVGGIYQEQMANNVSKVPLLGDIPVL 666 Query: 570 GQLFRYTSTERAKRNLMVFIRPTII 594 G LF+ S R++ L+ FI P I+ Sbjct: 667 GNLFKSRSRSRSRNELLFFITPRIM 691 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 63/198 (31%), Gaps = 15/198 (7%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 + ++ +F N ++R ++I+ Q G I+ SVQG +++ + Sbjct: 268 AQQNFTGKRISLDFQNIEVRTVLQILAQESGMNIVASDSVQGKMTLSL-KDVPWDQALDL 326 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 ++D + N R + L ++ L+ Sbjct: 327 ---VMDARNLDMRKHGNIINIAPRQELLDKDRNEAKARREMEDLGALYSKTFQLKYKNVE 383 Query: 139 DLAPLLRQMMDA---------GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 + +LR + G+ + +N LI+T S I K +I +DV Sbjct: 384 EFKNILRLSDSPNTNDRSNILSTRGSALIDPATNTLIVTDNQSVIQKFERLIDELDVPAK 443 Query: 190 EKQQIIHLEYASAEDLAE 207 + + A D Sbjct: 444 QVM--VEARIVEAADGVS 459 >UniRef50_Q212Y1 Type II and III secretion system protein n=5 Tax=Bradyrhizobiaceae RepID=Q212Y1_RHOPB Length = 774 Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 133/575 (23%), Positives = 240/575 (41%), Gaps = 31/575 (5%) Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 ISV S Q + S G + + + + + + + Sbjct: 192 ISVVPLQHVSAQTVVKLVDSFGTKPGMVRADTGRNLILLQGTGSERRNAVDLVLGFDADW 251 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVG------NVVHYEPSN-VLILTGRASTI 174 I P++N + L +++D+G G N VL +T ++ + Sbjct: 252 MRGQSVGIFPVQNSNPEPIIAELEKIVDSGEGGVTQSMIKFQAISRMNAVLAVTRKSELL 311 Query: 175 NKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVA 232 ++ I+R+D G + ++Y A +A +LN++ AL SA Sbjct: 312 RRVETWIQRLDTTNTGRSAIHVYRVKYGEARQIARVLNEIFGGGGATGSSSALDSAAGQI 371 Query: 233 DKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKAT---NLVEVLTGVS 289 + S A R+++ S + + A AT + S Sbjct: 372 APGSGLAASSSSSSALNRLSAGQSSSGFATGAKTASSGAATTNAPATPSGAQGSLFDARS 431 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 + + SS +D + ITAD N+L+I A Q + + ++D + QV Sbjct: 432 GGSPGGRSGTAESSSGNILDGIRITADTVNNALLIYASQEQYSIVERTVRQVDQPQLQVA 491 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW 409 ++A I EV + L GVQ + + G ++ + + + A P + Sbjct: 492 IDATIAEVTLTDDLQFGVQTYLTSRDFGMPADRGSLGTASSSALISAASDVVLNRAIPGF 551 Query: 410 DMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 + +L AL + + +L+ PS+V +DN++A+ VG ++P+ +G Sbjct: 552 NFLVGSG--------SSPKAILNALHAITEVKVLSNPSLVVIDNQVATLQVGDEIPIQTG 603 Query: 470 SQT--TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSV---------DSSS 518 S T +S + + NT + + G L+V P++N V LEIEQE+S+ S+S Sbjct: 604 SATVLSSSNTIANTTDYRRTGILLQVVPRINANGNVRLEIEQEISNPVASSSTSSSSSTS 663 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 ++L PT +TR ++++V V +G+TV+L GL+ D + S +P L +P VG +F T Sbjct: 664 TNSLTPTVSTRKVKSSVAVASGQTVLLAGLISDTQNKTRSGIPGLDQLPGVGDVFSQTEK 723 Query: 579 ERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 + L++FIRP IIRD +++E T+ R Sbjct: 724 IMKRTELIIFIRPQIIRDGSDAHFVAEELRTKLRG 758 Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 118/286 (41%), Gaps = 13/286 (4%) Query: 25 NEQYGANFNNADIRQFVEI-VGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + + NF N + ++ +G LG +IDP VQG IS+ S + + + L Sbjct: 93 GDGFELNFENTPVASVAKVVLGDILGIGYVIDPRVQGNISLSSGRPVPKSDILFALENAL 152 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 + G +++ DN +++ A+ G+ + + +VPL++V A+ + L Sbjct: 153 RIGGVALVR-DNAAYRLMPQADAV---GVGSADAAERTEAGYGISVVPLQHVSAQTVVKL 208 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYAS 201 + G V N+++L G S ++++ D Q + ++ ++ Sbjct: 209 VDSFGTK--PGMVRADTGRNLILLQGTGSERRNAVDLVLGFDADWMRGQSVGIFPVQNSN 266 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI-ISGPEKARQRITSLLKSLDV 260 E + L +++ G K A R N+++ ++ + +R+ + ++ LD Sbjct: 267 PEPIIAELEKIVDSGEGGVTQSM---IKFQAISRMNAVLAVTRKSELLRRVETWIQRLDT 323 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 + VY +KY +A + VL + ++ S++G Sbjct: 324 TNTGRSAIHVYRVKYGEARQIARVLNEIFGGGGATGSSSALDSAAG 369 >UniRef50_C0QUI7 Fimbrial assembly protein PilQ n=1 Tax=Persephonella marina EX-H1 RepID=C0QUI7_PERMH Length = 608 Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats. Identities = 112/631 (17%), Positives = 228/631 (36%), Gaps = 65/631 (10%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPS-VQGTI 62 + KIT +L +++ ++ A F A + F+++V + K I+ D ++ Sbjct: 1 MRKITFSILILMMVLTLKSFAQQRVTAEFYGAKLSTFIDVVSKLSNKNIVWDKEALKNKD 60 Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVG 122 + F L G + + N + + + + Sbjct: 61 NAVYLSIRKPTSIETLFRLALKENGLTYVREGN-LYIIKPAEEALITVSPVITKYLGKEI 119 Query: 123 DELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 E +V + G + Y+ SN + + + K+ ++++ Sbjct: 120 FESFVELVE----------------GNISPTGEIKVYKTSNAIYVRDTKENVQKIKQLVE 163 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILN----QLISESHGKSQMPALLSAKIVADKRTNS 238 + + + E+ + + ++ S K K + D+ + Sbjct: 164 EYKKPLQREAEKLARLEEEREEELKKIRTKRAEIESLLIKKEVEIPYKDFKEIEDELVEN 223 Query: 239 LIISGP------------EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT 286 L G + + I+ + K + + + T+ YY++ + L+ + Sbjct: 224 LSSYGRYKYNKKTGKLTVIELKSNISKISKIIAKAQKIDIKTKCYYVRALEPAELLITIK 283 Query: 287 G---------------VSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV-------I 324 +S+ L EK + ++ A E+ +++ I Sbjct: 284 ESYLTKYGSVIYKSKEISKALGVEKQTTGGTGGTTGGSTISSYATEKEKNIITSLPKVCI 343 Query: 325 TADQSVQEKL-ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG 383 T V +K+ L R Q+ +EA IV+++ +LG+QW G G Sbjct: 344 TDVPEVIDKIYKDFSEVLLKRPYQIAIEARIVQIESSYKRDLGIQWGFAASGGAGNIGYG 403 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 + A + D+ + N ++ + + L+AL K+ IL Sbjct: 404 VTTGTATGYMFDFP------AGNVDVGKGASMSIGIVRGLTTSLDIQLSALEQIGKSRIL 457 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAV 503 + P ++T+D + A + G +VP + +G V+ K KL V P+ + Sbjct: 458 SRPKVITIDGEGAEISQGIEVPYST--FGAAGGAAIARVQFKKALLKLNVIPRTTLDGNI 515 Query: 504 LLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 ++ IE D P NT++I + V+ K G T+V+GG+L+ +E + VP L Sbjct: 516 IMNIELTQDVPDFGRAVNGQPPINTKSITSKVIAKDGTTIVIGGILEKTEQETENGVPGL 575 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 ++PL G LF+ + L++FI P II Sbjct: 576 RNVPLFGWLFKNKGINTTNKELLIFITPKII 606 >UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter RepID=B5E8I3_GEOBB Length = 946 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 95/404 (23%), Positives = 161/404 (39%), Gaps = 35/404 (8%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRI- 251 ++ +L + A+D+ ++ + + +L AK +A R +++ P Q Sbjct: 575 EVSNLNFLIADDVTGTISIKLVNVPWDQALDVILDAKGLAMVREGNIVQIKPRSKMQNQA 634 Query: 252 -TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 L E E T V+ + YA ++ + D Sbjct: 635 DEELAAKKAAERLMELKTMVFEVNYASVNDVAMQFGML------------------KSDR 676 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 IT DE+T+ +++ Q+ + ++ LD QV++EA IVE +LGVQW Sbjct: 677 GVITKDERTSRVIVKDIQTALNDMKALLKTLDAPEKQVMIEARIVEATSTFTRDLGVQWG 736 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + GV G + M N + Sbjct: 737 LSYRDGSASVAGINSVDTGFGGVVSAAGPGSSGAGGLGLGM-----SFGKLTSNIKLDMR 791 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 L A A+ + I++TP +VTL+NK A + GQ +P + S E Sbjct: 792 LAAAATIGQVKIISTPKVVTLNNKAAKISQGQSIPYQTTSAEG------TKTEFVEAALT 845 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLD 550 L+VTP + +V ++I+ +S + S P N + ++V G+T V+GG+ Sbjct: 846 LEVTPHITADGSVSMKIKASNNSPGTGS----PPPINKKEATTELVVSNGDTTVIGGIYV 901 Query: 551 DFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 D E + VP L DIPL+G LF+ S ++ K L++FI P I+ Sbjct: 902 DSDTESDTGVPFLSDIPLLGWLFKSNSKQKTKTELLIFITPKIV 945 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 92/304 (30%), Gaps = 10/304 (3%) Query: 9 CCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSND 68 + P + F++AD+R+ +++ + LI V GTIS++ + Sbjct: 538 MAVQLPSDRPAKKVYTGRRVTLEFSDADVRKIFQLIAEVSNLNFLIADDVTGTISIKLVN 597 Query: 69 TFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTR 128 + ILD G +++ N RS + +A EL T Sbjct: 598 -VPWDQALDV---ILDAKGLAMVREGNIVQIKPRSKMQNQADEELAAKKAAERLMELKTM 653 Query: 129 IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG 188 + + D+A + G + E ++ +I+ + +N + ++K +D Sbjct: 654 VFEVNYASVNDVAMQFGML--KSDRGVITKDERTSRVIVKDIQTALNDMKALLKTLDAPE 711 Query: 189 TEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR 248 + I A L + + + A I + ++S Sbjct: 712 KQVM--IEARIVEATSTFT--RDLGVQWGLSYRDGSASVAGINSVDTGFGGVVSAAGPGS 767 Query: 249 QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM 308 L + + L A V++++ + K S Sbjct: 768 SGAGGLGLGMSFGKLTSNIKLDMRLAAAATIGQVKIISTPKVVTLNNKAAKISQGQSIPY 827 Query: 309 DNVA 312 + Sbjct: 828 QTTS 831 >UniRef50_A4A5L7 General secretion (Type II) pathway protein D n=3 Tax=unclassified Gammaproteobacteria RepID=A4A5L7_9GAMM Length = 745 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 134/577 (23%), Positives = 239/577 (41%), Gaps = 35/577 (6%) Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 V S + + + + + L + + + I + + Sbjct: 180 VIPLQYISAKAMASILEPLAEKDAFVRVDDTRALLMMAGTREQLSGWLEIVSTFDVDMLA 239 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSV--------GNVVHYEPSNV-LILTGRASTI 174 + + PLEN + + +MDA V+ E N L++T RA + Sbjct: 240 GMSVGMFPLENSSVNETMEAIETLMDATGGEEGGISGIVRVLPMERLNSILVVTPRAHYL 299 Query: 175 NKLIEVIKRVDVIGTEKQQ----IIHLEYASAEDLAEILNQLISESHG----KSQMPALL 226 +++ + I+R DV + + + ++ +A LA++LN + + + Q + Sbjct: 300 DRVGDWIQRFDVDPDARFEKRLYVYPVQNTTATRLAQLLNSIYAGGNAGAAGTRQSSGAI 359 Query: 227 SAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLT 286 + + ISG + S + + T + Sbjct: 360 GDQAAVAPGLSPESISGGGSSVFGGASGDAGDGSTMGGSNSASNTGSFGSGGTGSGQGAR 419 Query: 287 GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 + + + +V + ADE+ N+L+I AD + + +LD+ Sbjct: 420 AAATAMTSVNMGTTGAGQISPLADVRVVADEENNALMIYADGKQYGIVKDALKQLDVVAT 479 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QV++EA I+EVQ + L G++W KN + G AA A + +T++ Sbjct: 480 QVIIEASIMEVQLIDELRYGLEWTFKNGLGNNYDGLGTLAAGAAGPAAAAGFSYTVTNSL 539 Query: 407 PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 GD +L AL+ + +++++PS++ LDN A +VG VPV Sbjct: 540 ------------------GDISAVLNALSEESLINVISSPSVMVLDNHTAFISVGDQVPV 581 Query: 467 LSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTF 526 L G T+G N + + G +L V P VN G V ++IEQ V V S ++T F Sbjct: 582 LQGQTITNGGNSVQNITYRDTGVQLSVRPSVNAGGLVTMDIEQSVIDVGSIDSATGQRAF 641 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 RTI + V V++ E+VVLGGL+ + S S VP+L +IPL G LF T+T+ + L+ Sbjct: 642 LDRTINSRVAVRSSESVVLGGLIRENSSLGDSGVPILREIPLFGSLFGTTTTDSRRTELL 701 Query: 587 VFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKS 623 V I P + +++ R++S E + R + R +S Sbjct: 702 VIITPRALYNEEELRAVSDEMREQVRFMKLVRDPPRS 738 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 117/291 (40%), Gaps = 11/291 (3%) Query: 25 NEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + NF A + + V IVG L ++D +QG +++R+ + E S+L Sbjct: 77 GDDVSLNFEQAPLDEVVHAIVGDILQLDYIVDRPIQGKVTLRTRTPIPRNELLVVLESLL 136 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 + +I D+G + S + + G T ++PL+ + A+ +A + Sbjct: 137 KAHDALMIRGDDGRYLITGSQQAMNLRPDVTSADDIAAG--FSTMVIPLQYISAKAMASI 194 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYAS 201 L + + + V + +L++ G ++ +E++ DV + LE +S Sbjct: 195 LEPLAEKDAF--VRVDDTRALLMMAGTREQLSGWLEIVSTFDVDMLAGMSVGMFPLENSS 252 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK-ARQRITSLLKSLDV 260 + E + L+ ++ G + +++ +R NS+++ P R+ ++ DV Sbjct: 253 VNETMEAIETLM-DATGGEEGGISGIVRVLPMERLNSILVVTPRAHYLDRVGDWIQRFDV 311 Query: 261 EESE--EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD 309 + E VY ++ AT L ++L + R+ S + Sbjct: 312 DPDARFEKRLYVYPVQNTTATRLAQLLNSIYAGGNAGAAGTRQSSGAIGDQ 362 >UniRef50_Q3JLH6 Type III secretion outer membrane pore, YscC/HrcC family n=35 Tax=Burkholderia RepID=Q3JLH6_BURP1 Length = 630 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 112/614 (18%), Positives = 205/614 (33%), Gaps = 60/614 (9%) Query: 6 KITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVR 65 I + + D++ + G I +VQGT++ R Sbjct: 56 AIFGTIGIGAANAMPVRWRSTVVHVVLEGKDLKDVLRDFAASQGVATSIAGNVQGTVTGR 115 Query: 66 SNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDEL 125 + S Q + + +G+ N +++ Sbjct: 116 FD--LSPQRFLDTLAA---TFGFVWFYDGNIL--------------------SITNANDM 150 Query: 126 VTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD 185 +++PL++ +L LRQ+ + + E S ++++G A + + ++ +R+D Sbjct: 151 TRQVLPLDHASIGELRSALRQIGMDDKRFPIFYDEVSGTVLVSGPAQYVQIVTDIAQRLD 210 Query: 186 VIGTEKQ----QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLII 241 + + +I L++A A D + G + ++ + R Sbjct: 211 TLSGRRNGSTIRIFKLKHAWAADRNVQI-------DGNTVTMPGIATVLANLYRVRGRAG 263 Query: 242 SGPEKARQRITSLLKSLDVEESEEGNTRVYYLKY--------AKATNLVEVLTGVSEKLK 293 +G A + + DV S G R+ A + G S Sbjct: 264 TGQSSAAPGVQRVQPMGDVSGSAYGGNRLMPPLPPSMMGGGRGDAFAKGASIDGESGGAA 323 Query: 294 DEKGNARKPSSSGAMDN---VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 + + + I D TNS++I + A +I +LDIR + + Sbjct: 324 SAAPGGAPRTEEASAERDELPIIQPDPMTNSVLIRDLPDRLAQYAPLIQQLDIRPRLIEI 383 Query: 351 EAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWD 410 +A I+E+ + +GV W N T TG N G G T A A Sbjct: 384 QAHIMEIDNDLLREIGVDWRAHNSHGDIQTGTGNTAQNDYSGGQINPFFGTTTLAGNAVV 443 Query: 411 MFSAYN---GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL 467 + G ++AL S +K I A+P + TLDN A + V Sbjct: 444 NAAPAGVSVTAVVGDAARHLMARVSALQSTSKVKIDASPLVATLDNSEAVMDNTTRFFVK 503 Query: 468 SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGD---AVLLEIEQEVSSVDSSSNSTLGP 524 ++ +T G L+V P + + + + + + L P Sbjct: 504 VSGYASAELYSVST------GVSLRVLPMIVQDGSETRIKMNVHVTDGQLTGDQVDNL-P 556 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 + I V G+++++ G D V+ VP L IPL+G LFRY S + Sbjct: 557 VITSSEINTQAFVGQGQSLLIAGYSTDKRANGVAGVPWLSKIPLLGALFRYHSDSQNHME 616 Query: 585 LMVFIRPTIIRDDD 598 + + P II Sbjct: 617 RVFLLSPRIIDPGT 630 >UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW26_DICNV Length = 734 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 95/425 (22%), Positives = 175/425 (41%), Gaps = 22/425 (5%) Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS-------LIISGPEKARQRITSL 254 ++ ++ + + + ++ K +A + + I E I +L Sbjct: 314 SDTVSGNITLRLDNVPWDQALDIIMKTKGLAKRENGNDKTGRIIYIAPEKELDTAEIDAL 373 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR-KPSSSGAMDNVAI 313 ++ T +KYAKA++L +L E D N + ++ Sbjct: 374 EGWQKKQQLMPMQTDFIRIKYAKASDLQRILEKSREISSDGTKNGILAAQDAVLSARGSV 433 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 T DE+ N+L+++ + + + ++ARLD QVLV+A +V +D +LG ++ Sbjct: 434 TIDERMNALIVSDIPAKIQAVRDLVARLDESVRQVLVDARLVITKDNFARDLGARFGLSF 493 Query: 374 VGAQQF----TNTGLPIFNAAQG-----VADYKKNGGITSANPAWDMFSAYNGMAAGFFN 424 G + L G G+ + ++ + G++ + Sbjct: 494 KGTAGSNPIVGSGNLTGTTFYAGMLEEKTIPIDNRLGVNLGIASPNVRAPSYGISILGSD 553 Query: 425 GDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVER 484 + L AL + +++++++P +VT D A GQ++P +T D + Sbjct: 554 VLVDLELQALQNEGRSEVISSPRVVTQDGNQAKVMSGQEIPY-----STLDDKGSVQTDY 608 Query: 485 KTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVV 544 K L+VTP+V D V +EIE + V+ S P + + V V GET+V Sbjct: 609 KEALLSLEVTPRVTPNDRVNMEIEIKKDRVNWSEQVLGQPAIDKNLLNTKVEVANGETIV 668 Query: 545 LGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLS 604 LGG+ + +KVPLLGDIP+VG +F+ T+ + K L++FI P +I Sbjct: 669 LGGIYEQEQSLSENKVPLLGDIPVVGNVFKNTNKKFTKNELLIFITPRVIDQRLTDSDKF 728 Query: 605 KEKYT 609 Sbjct: 729 SNLRD 733 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 85/279 (30%), Gaps = 29/279 (10%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 E NF + ++R + I+ + + I++ +V G I++R ++ + Sbjct: 274 TGFAPNKVYTGEPLSLNFQDIEVRAVLNIIAEFTQQNIVVSDTVSGNITLRLDN-VPWDQ 332 Query: 75 YYQFFLSILDLYGYSVITLDNG-----FLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 I+ G + N + + + T Sbjct: 333 ALDI---IMKTKGLAKRENGNDKTGRIIYIAPEKELDTAEIDALEGWQKKQQLMPMQTDF 389 Query: 130 VPLENVPARDLAPLLR-----------------QMMDAGSVGNVVHYEPSNVLILTGRAS 172 + ++ A DL +L Q + G+V E N LI++ + Sbjct: 390 IRIKYAKASDLQRILEKSREISSDGTKNGILAAQDAVLSARGSVTIDERMNALIVSDIPA 449 Query: 173 TINKLIEVIKRVDVIGTE---KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAK 229 I + +++ R+D + +++ + A DL + G + + + Sbjct: 450 KIQAVRDLVARLDESVRQVLVDARLVITKDNFARDLGARFGLSFKGTAGSNPIVGSGNLT 509 Query: 230 IVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNT 268 + P R + + S +V G + Sbjct: 510 GTTFYAGMLEEKTIPIDNRLGVNLGIASPNVRAPSYGIS 548 >UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae RepID=COME_HAEIN Length = 445 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 91/343 (26%), Positives = 158/343 (46%), Gaps = 24/343 (6%) Query: 266 GNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVIT 325 + L +AKA+ L++ LT S S +IT D+++N LVI Sbjct: 120 LVSHTVKLHFAKASELMKSLTT--------------GSGSLLSPAGSITFDDRSNLLVIQ 165 Query: 326 ADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLP 385 + + + +IA +D Q+ +EA IV + D + LGV+W N G Sbjct: 166 DEPRSVQNIKKLIAEMDKPIEQIAIEARIVTITDESLKELGVRWGIFNPTENARRVAGSL 225 Query: 386 IFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILAT 445 N+ + +AD T+ PA + + + L+AL N +I+A+ Sbjct: 226 TGNSFENIADNLNVNFATTTTPAGSIALQVAKINGRL----LDLELSALERENNVEIIAS 281 Query: 446 PSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLL 505 P ++T + K AS G ++P + ++ N +VE + L+VTP +++ + +LL Sbjct: 282 PRLLTTNKKSASIKQGTEIPYIV----SNTRNDTQSVEFREAVLGLEVTPHISKDNNILL 337 Query: 506 EIEQEVSSVDSSSN--STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 ++ +S S + + + I V K GET+VLGG+ D + KVPLL Sbjct: 338 DLLVSQNSPGSRVAYGQNEVVSIDKQEINTQVFAKDGETIVLGGVFHDTITKSEDKVPLL 397 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKE 606 GDIP++ +LF S KR L++F+ P I++ + +L ++ Sbjct: 398 GDIPVIKRLFSKESERHQKRELVIFVTPHILKAGETLEALKQK 440 Score = 75.9 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 82/249 (32%), Gaps = 17/249 (6%) Query: 7 ITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRS 66 C L++ +NE++ + A + Q +E + ++I ++ IS++ Sbjct: 11 FLVCFCLPLIVFANPKTDNERFFIRLSQAPLAQTLEQLAFQQDVNLVIGDILENKISLKL 70 Query: 67 NDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELV 126 N+ + + I ++ D + + G + + LV Sbjct: 71 NNI----DMPRLLQIIAKSKHLTLNKDDGIYYLNGSQSGKGQVAGNLTTNEPH-----LV 121 Query: 127 TRIVPLENVPARDLAPLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 + V L A +L L + G++ + SN+L++ ++ + ++I + Sbjct: 122 SHTVKLHFAKASELMKSLTTGSGSLLSPAGSITFDDRSNLLVIQDEPRSVQNIKKLIAEM 181 Query: 185 DVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 D + I +E E L +L P + ++ NS Sbjct: 182 DKPIEQ----IAIEARIVTITDESLKEL--GVRWGIFNPTENARRVAGSLTGNSFENIAD 235 Query: 245 EKARQRITS 253 T+ Sbjct: 236 NLNVNFATT 244 >UniRef50_C0AE16 Type II and III secretion system protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AE16_9BACT Length = 809 Score = 295 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 128/679 (18%), Positives = 260/679 (38%), Gaps = 81/679 (11%) Query: 11 LLAALLMPCAGHAENEQY-GANFNNADIRQFVEIVGQHLGKTILIDPSV-QGTISVRSND 68 L L + A ++ + ++ Q +E++ + G+++L ++ T ++ Sbjct: 52 LSGGLPVQIGAPAADDMIPELIMRDMELSQALELLERLTGRSVLRPGALPANTYTLTIKK 111 Query: 69 TFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG--VGDELV 126 S+ E ++ + +++ L + FLKVV SA + + S G + Sbjct: 112 PISKAEAVVALETLFGMNQIAIVPLGDKFLKVVPSAMARNEAPEFIEGSTLGMSPSSRIA 171 Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 ++ L+ + ++A L +++ + +E SN +++T + + ++ V+K VD Sbjct: 172 AKLFHLDFLRVSEIAQQLPLLINQTLANQPMAFEKSNSILITDTITILQRIEAVLKEVDR 231 Query: 187 I--GTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 + LE+A A D+ + I+ K + AD RTN +I+ Sbjct: 232 PVASHFTTKTYTLEFAKASDVVTKIKSFITAELQK---DFSANTTYTADDRTNQIILISH 288 Query: 245 EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS 304 + +++ LD+ + V +LK+AKA ++ +LT + + Sbjct: 289 PAEQNFFDNIITKLDIRADPNTRSEVIFLKHAKAPDVNTILTQLISGQNNATRTTTGGQQ 348 Query: 305 SGAMDN-------------------------------------------------VAITA 315 A + + A Sbjct: 349 GAAATTNRAATTTANRTATANQQQRTAQNTQASRNTAVASALSNQGAASEQFSTLLTVVA 408 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 DE++NS++I+ +I ++D+ AQV +E +I EV + G+ Sbjct: 409 DERSNSIIISGTADDIRLTRELIDKIDVLLAQVRIEVVIAEVSLSDEATSGID------- 461 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 GL I N GG + F A L+ Sbjct: 462 -----TLGLRIENGVLTGFAASGPGGKIAGIDNGTFFQTAKENALAGVIS-----LSTTP 511 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVL-SGSQTTSGDNVFNTVERKTVGTKLKVT 494 N +IL+ P+IVT N+ A +G+ P++ + T+ + + + ++ +G L VT Sbjct: 512 RKNNTNILSVPTIVTSHNQEAEVFIGEKRPIITGTTTTSDSLSTSSQITQQQIGITLTVT 571 Query: 495 PQVNEGDAVLLEIEQEVSSVDS--SSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDF 552 P + +V +++EQ+V + + + P R ++ + ++G+ VVLGG+ Sbjct: 572 PLIGPNGSVQMQLEQKVEDISGFVTIDGNEQPITTDRNAKSFLSARSGDIVVLGGMQRTK 631 Query: 553 SKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYR 612 S+ LG IP +G LF S + ++ FIRPT++ + + + ++ R Sbjct: 632 KGNTTSR---LGPIPWIGDLFGKRSKTDQRTEILFFIRPTVLTNTQLDNVEAYQQVDRAP 688 Query: 613 QEQQQRIDGKSKALVGSED 631 + R ++ L S D Sbjct: 689 HAAEIRKVLDTRPLAASTD 707 >UniRef50_C1DU75 PilQ n=3 Tax=Sulfurihydrogenibium RepID=C1DU75_SULAA Length = 604 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 117/617 (18%), Positives = 227/617 (36%), Gaps = 38/617 (6%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPS-VQ 59 MK + L+ + P + E+ NNA + V+ + Q I+ D + Sbjct: 1 MKKVKNSLLALVIGSVTPLSLSF-AEKVSIELNNAKLSTVVDAISQVSSINIIWDKDAIA 59 Query: 60 GTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 + + + IL G + + + + + P + + Sbjct: 60 QKDKLVYVSIKKPYDAEKLLNLILVENGLIAVREGDVYKIRLSDEYFVSIPPEVIKTLGK 119 Query: 120 GVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVL----ILTGRASTIN 175 + DE+V I +N + L D + + + NV I++ T+ Sbjct: 120 DIFDEIVLTIK--KNASSSALIEA-----DRNTYTVYLKDKKDNVYKIKNIVSAYLDTLK 172 Query: 176 KLIEVIKRVD-VIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADK 234 K E I ++ G ++ ++ Y + + + + + + I + I+ K Sbjct: 173 KQTEEIAKLQKEQGQFVKKEFNISYENYKLIEDKIIENIGPFGRYNYDKEKGILTILDTK 232 Query: 235 RTNSLIISGPEKARQRITS-------------LLKSLDVEESEEGNTRVYYLKYAKATNL 281 I KA + ++ ++ E T ++ K +A + Sbjct: 233 DNILNITRVIGKATKEKIETKCFYARGLEPGEIIMNIKENYLSENGTVIFKSK--EALEI 290 Query: 282 VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLA-TVIAR 340 T + + S + IT+ + + IT + EK+ Sbjct: 291 GGTETRQLSTTGGTQTGIAGLTKSTSQPATIITSLPK---ICITDKPDIIEKIKYRFSDY 347 Query: 341 LDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNG 400 L R Q+ +EA IV++ N +LG+QW + N+ +A+Y+ Sbjct: 348 LLDRPYQISIEARIVQISSKNVKDLGIQWGGLASNIDNNNTKIIAGTNSTSYLANYRPGS 407 Query: 401 GITSANPAWD---MFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 PA G G + L+AL S K+ IL+ PS++T+D + A Sbjct: 408 AYAVDFPAVQSKIPGGFSLGFILGGTQNFLDIRLSALQSIGKSKILSKPSVITIDGETAE 467 Query: 458 FNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS 517 + G ++P + +G ++V K KL VTP+ +++++ D Sbjct: 468 ISQGYEIPYTTAVA--AGGGTVSSVSFKKAVLKLNVTPRTTADGNIIMDLIITQDIPDFK 525 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 + P T+T+ + V+ K G VV+GG+L+ Q S VP L +IP++G LF+ Sbjct: 526 NLLLGNPPIQTKTVTSKVVAKDGSVVVIGGILEKTEDTQTSGVPGLMNIPILGNLFKENF 585 Query: 578 TERAKRNLMVFIRPTII 594 + L++F+ P I+ Sbjct: 586 KQDTSTELLIFLSPKIV 602 >UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2K0_9PROT Length = 688 Score = 294 bits (752), Expect = 8e-78, Method: Composition-based stats. Identities = 93/487 (19%), Positives = 191/487 (39%), Gaps = 47/487 (9%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 P++ V A + ++ Y+ N I+ + + +++K Sbjct: 225 PVQLVDAYAQGENVHLSIEPKGDWEYSAYQADNKFII-DVKTVVEDPNKLVKGNQPGYAG 283 Query: 191 KQQIIHLEYAS------------------AEDLAEILNQLISESHGKSQMPALLSAKIVA 232 ++ ++ + S ++ ++ L + + + +L +K + Sbjct: 284 EKLTLNFQNISTREALSVIADFTGLNMVISDTVSGNLTLRLKDVPWDQALDIILQSKGLD 343 Query: 233 DKRTNSLIISGPEKARQRITSL--LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE 290 ++ ++I P + L ++ + E T + L YAKA ++ +L Sbjct: 344 MRKNGNVIQVAPREEIASKEKLDFASRQEIGDLEPLRTESFQLSYAKALDIANLLKN--- 400 Query: 291 KLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 + + +D +TN+L + + E++ T + +LD+ QV++ Sbjct: 401 -----------KDTGLLSKRGSSVSDLRTNTLFVQDTPTRLEEVRTFVKQLDVPVRQVMI 449 Query: 351 EAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWD 410 EA VE + LG + + G+ ++ G S Sbjct: 450 EARFVEAGETFNQTLGGRLSYTGPGSTVAGGGFAGPAGNRAALSTTSLLPGAGSVTGGMT 509 Query: 411 MFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGS 470 + + + L A + +A+P +VT D A+ G +VP L + Sbjct: 510 L-----NLFNAAATKVLTLELNASELDGTTKNIASPRVVTGDKTPATIESGVEVPYLQAT 564 Query: 471 QTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRT 530 + + +V K L VTPQ+ D V +++ +V + + P+ NT+ Sbjct: 565 SSGA-----TSVAFKKAVLGLTVTPQITPDDHVGMKLSVSQDTVG--NIYSGVPSINTKK 617 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 + VLV G TVV+GG+ + + ++PLLGDIP++G LF+ + +AK+ L+VFI Sbjct: 618 VDTQVLVDNGGTVVIGGVYTQDATDSKEQIPLLGDIPILGWLFKTDTIVKAKKELLVFIT 677 Query: 591 PTIIRDD 597 P I+++ Sbjct: 678 PKIVKES 684 Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 90/291 (30%), Gaps = 13/291 (4%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 E+ NF N R+ + ++ G ++I +V G +++R + Sbjct: 278 QPGYAGEKLTLNFQNISTREALSVIADFTGLNMVISDTVSGNLTLRL-KDVPWDQALDI- 335 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 IL G + N R A G + L T L A D Sbjct: 336 --ILQSKGLDMRKNGNVIQVAPREEIASKEKLDFASRQEIGDLEPLRTESFQLSYAKALD 393 Query: 140 LAPLL--RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHL 197 +A LL + G+ V +N L + + + ++ +K++DV + I Sbjct: 394 IANLLKNKDTGLLSKRGSSVSDLRTNTLFVQDTPTRLEEVRTFVKQLDVPVRQVM--IEA 451 Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS 257 + A + NQ + + + ++ A N +S S+ Sbjct: 452 RFVEAGE---TFNQTLGGRLSYTGPGSTVAGGGFAGPAGNRAALSTTSL-LPGAGSVTGG 507 Query: 258 LDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM 308 + + T+V L+ A+ L ++ SG Sbjct: 508 MTLNLFNAAATKVLTLE-LNASELDGTTKNIASPRVVTGDKTPATIESGVE 557 >UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLX9_9GAMM Length = 702 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 97/518 (18%), Positives = 195/518 (37%), Gaps = 58/518 (11%) Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM 148 ++ N + V SA + ++L+ PL L Q Sbjct: 238 AMANKGNTSILVKPSA-------EPYEYLAYQTDNKLILDFKPLSQAEKDQRTKDLFQFT 290 Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEI 208 N + E +VL + ++ L ++ + Sbjct: 291 GEKIDLNFQNVELRSVLQIIA-----------------------EVAELNLVVSDTVGGN 327 Query: 209 LNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEG 266 + + + +L K + + ++++ P E A + L S VE+ Sbjct: 328 ITLRLKNVPWDQALDIILKTKGLDQRTVGNVLLIAPAAEIAERERQELESSKQVEQLAPL 387 Query: 267 NTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITA 326 T + Y KA+ ++ + + + + AD++TN L++ Sbjct: 388 RTEFIQVDYRKASEMMSTIQ----------------EAKMVSERGFVMADDETNVLMVRE 431 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPI 386 + + ++ + D+ QVLVEA +V +LGV+W + Sbjct: 432 TATALRDIRNILKKFDVEVEQVLVEARLVNATSNVTKDLGVKWGFGYNDVDNGKGWIVDN 491 Query: 387 FNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA---SNNKNDIL 443 + ++ +A GF G +L L+ ++ K +I+ Sbjct: 492 SIGNVNFGNTTAGNTSNLMVDLGASVTSPGTIAIGFKPGASSLLALELSALETDGKAEIV 551 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAV 503 + P ++T + K A G ++P + + ++E K V L VTP++N GD + Sbjct: 552 SQPKVLTTNGKQAKIESGSEIPYQTVE------DGEVSIEFKDVVLSLDVTPRINPGDRI 605 Query: 504 LLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 +++ S+ + + + +Q V+V G+T+VLGG+ + + E ++KVPLL Sbjct: 606 AMDLLITQDSIGQVLPNGEI-SIDNNELQTTVVVPDGQTIVLGGVFKNETSETINKVPLL 664 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 GD+P++G LFR + K L++FI P ++R+ + Sbjct: 665 GDLPIMGPLFRNKENQAEKTELLIFITPKLVRNSLTAQ 702 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 72/182 (39%), Gaps = 4/182 (2%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 E+ NF N ++R ++I+ + +++ +V G I++R + Sbjct: 288 QFTGEKIDLNFQNVELRSVLQIIAEVAELNLVVSDTVGGNITLRL-KNVPWDQALDI--- 343 Query: 82 ILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA 141 IL G T+ N L + + + S + L T + ++ A ++ Sbjct: 344 ILKTKGLDQRTVGNVLLIAPAAEIAERERQELESSKQVEQLAPLRTEFIQVDYRKASEMM 403 Query: 142 PLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 +++ G V+ + +NVL++ A+ + + ++K+ DV + L A+ Sbjct: 404 STIQEAKMVSERGFVMADDETNVLMVRETATALRDIRNILKKFDVEVEQVLVEARLVNAT 463 Query: 202 AE 203 + Sbjct: 464 SN 465 >UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadaceae RepID=Q2P6L4_XANOM Length = 649 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 123/589 (20%), Positives = 215/589 (36%), Gaps = 70/589 (11%) Query: 46 QHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVR--- 102 + G +L+D S + R Q + V +G V+ Sbjct: 86 RTQGDNVLVDIS-----NARLPAEL--QRPLNVTDFATPVQRVEVKPSGSGSQLVLSTKG 138 Query: 103 --SANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYE 160 + + P G V + P A R N Sbjct: 139 AFDSLAYQTGNEYVVEITPRKGQPAVGGVSPAAVTQAAAQIAA-RGYSGRPVTFNFQDVP 197 Query: 161 PSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKS 220 VL L S +N ++ V G +++++ + A D+ Sbjct: 198 VRTVLQLIAEESNLN----IVASDTVQGNVTLRLMNVPWDQALDIV-------------- 239 Query: 221 QMPALLSAKIVADKRTNSLIISGPEKARQRITS--LLKSLDVEESEEGNTRVYYLKYAKA 278 L AK + +R ++ P+ + + +E E+ T + Y A Sbjct: 240 -----LRAKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNA 294 Query: 279 TNLVEVLTG--------VSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSV 330 + + LT S + +G A + + + ADE+TN+L+I+ Sbjct: 295 AVIFKALTEAKGIGGGGGSGGGQGGQGGAGQQDNGFLSPRGRLVADERTNTLMISDIPKK 354 Query: 331 QEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA----QQFTNTGLPI 386 ++ +I+ +D QVL+E+ IV D +LG ++ ++ Sbjct: 355 VAQMRELISHIDRPVDQVLIESRIVIATDTFARDLGARFGIIGATGRGILSGSLDSNTNY 414 Query: 387 FNAAQGVADYKKNGGITSANPAWDMFSAYN-----------------GMAAGFFNGDWGV 429 N + A NGG ++ PA S N N + + Sbjct: 415 LNTSAKRASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTNTPGGLAYTLLGSNFNLDI 474 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 L+A+ + ++++ P IVT + + G+++ ++ S + +G V+ K V Sbjct: 475 ELSAMQQEGRGEVVSNPRIVTANQREGVIKQGREIGYVTISGSGAGGGSQANVQFKEVLL 534 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS---TLGPTFNTRTIQNAVLVKTGETVVLG 546 +LKVTP + + V L + + V + P N R I AVLV GETVV+G Sbjct: 535 ELKVTPTITNDNRVFLNMNVKKDEVARLIDLPLYGTVPEINRREINTAVLVGDGETVVIG 594 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIR 595 G+ + +E VSKVP LGDIP +G LF+ + K L+VF+ P ++R Sbjct: 595 GVYEFTDRESVSKVPFLGDIPFLGNLFKKRGRSKEKAELLVFVTPKVLR 643 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 29/233 (12%), Positives = 66/233 (28%), Gaps = 29/233 (12%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQ 73 A A NF + +R ++++ + I+ +VQG +++R + Sbjct: 175 AAAQIAARGYSGRPVTFNFQDVPVRTVLQLIAEESNLNIVASDTVQGNVTLRLMN-VPWD 233 Query: 74 EYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLE 133 + +L G + K ++L+T V + Sbjct: 234 QALDI---VLRAKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQIN 290 Query: 134 NVPARDLAPLLRQMMDA------------------------GSVGNVVHYEPSNVLILTG 169 A + L + G +V E +N L+++ Sbjct: 291 YHNAAVIFKALTEAKGIGGGGGSGGGQGGQGGAGQQDNGFLSPRGRLVADERTNTLMISD 350 Query: 170 RASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQM 222 + ++ E+I +D + + A+ + A L + Sbjct: 351 IPKKVAQMRELISHIDRPVDQVLIESRIVIAT-DTFARDLGARFGIIGATGRG 402 >UniRef50_P29041 General secretion pathway protein D n=22 Tax=Xanthomonadaceae RepID=GSPD_XANCP Length = 759 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 117/578 (20%), Positives = 219/578 (37%), Gaps = 36/578 (6%) Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 + V S E + + + + + Sbjct: 191 EVRVVPLKYISASEMKKVLEPYARPNAIVGTDASRNVITLGGTRAELENYLRTVQIFDVD 250 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMM------DAGSVGNVVHYEPSN-VLILTGRAST 173 + + P+++ A ++ L ++ + + + E +N VL++T + Sbjct: 251 WLSGMSVGVFPIQSGKAEKISADLEKVFGEQSKTPSAGMFRFMPLENANAVLVITPQPRY 310 Query: 174 INKLIEVIKRVDVIGTEKQQI-IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVA 232 ++++ + + R+D G + L+Y A+DLA+ L+++ L V Sbjct: 311 LDQIQQWLDRIDSAGGGVRLFSYELKYIKAKDLADRLSEVFGGRGNGGNSGPSLVPGGVV 370 Query: 233 DKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 + N R SL S + G T + + + +L Sbjct: 371 NMLGN------NSGGADRDESLGSSSGATGGDIGGTSNGSSQSGTSGSFGGSSGSGMLQL 424 Query: 293 KDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEA 352 + D V ++A +TN+L++ + + VI +LD+ QV +EA Sbjct: 425 PPSTNQNGSVTLEVEGDKVGVSAVAETNTLLVRTSAQAWKSIRDVIEKLDVMPMQVHIEA 484 Query: 353 IIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMF 412 I EV L GV W +N G N Sbjct: 485 QIAEVTLTGRLQYGVNWYFENAVTTPSNADGSGGPNLPSAAGR--------GIWGDVSGS 536 Query: 413 SAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQT 472 NG+A F + +++AL +L TPS+ +N A+ NVG +P+ S S Sbjct: 537 VTSNGVAWTFLGKNAAAIISALDQVTNLRLLQTPSVFVRNNAEATLNVGSRIPINSTSIN 596 Query: 473 TS--GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL-------- 522 T D+ F++V+ G LKV P+V + V L+I QEVS+ + + Sbjct: 597 TGLGSDSSFSSVQYIDTGVILKVRPRVTKDGMVFLDIVQEVSTPGARPAACTAAATTTVN 656 Query: 523 ----GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 NTR ++ V+ G+T++L GL+DD + + + +P L +P+VG LF + Sbjct: 657 SAACNVDINTRRVKTEAAVQNGDTIMLAGLIDDSTTDGSNGIPFLSKLPVVGALFGRKTQ 716 Query: 579 ERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQ 616 +R ++V I P+I+R+ R L+ E ++++ + Sbjct: 717 NSDRREVIVLITPSIVRNPQDARDLTDEYGSKFKSMRP 754 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 118/299 (39%), Gaps = 12/299 (4%) Query: 12 LAALLMPCAGHAENEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTF 70 AA P G A + NF ++ V+ I+G LG+ +I P VQGT+++ + + Sbjct: 78 AAAAPSPTLGMASSGSATFNFEGESVQAVVKAILGDMLGQNYVIAPGVQGTVTLATPNPV 137 Query: 71 SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIV 130 S + +L ++ + V A+ + + ++ P R+V Sbjct: 138 SPAQALNLLEMVLGWNNARMVFSGGRYNIVP--ADQALAGTVAPSTASPSAARGFEVRVV 195 Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 PL+ + A ++ +L ++ V NV+ L G + + + ++ DV Sbjct: 196 PLKYISASEMKKVLEPYARPNAI--VGTDASRNVITLGGTRAELENYLRTVQIFDVDWLS 253 Query: 191 KQQ--IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP-EKA 247 + ++ AE ++ L ++ E +S+ P+ + + + N++++ P + Sbjct: 254 GMSVGVFPIQSGKAEKISADLEKVFGE---QSKTPSAGMFRFMPLENANAVLVITPQPRY 310 Query: 248 RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 +I L +D Y LKY KA +L + L+ V + + G Sbjct: 311 LDQIQQWLDRIDSAG-GGVRLFSYELKYIKAKDLADRLSEVFGGRGNGGNSGPSLVPGG 368 >UniRef50_Q0BR89 General secretion pathway protein D n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BR89_GRABC Length = 779 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 110/589 (18%), Positives = 215/589 (36%), Gaps = 27/589 (4%) Query: 58 VQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSS 117 + G ++ S ++ + + V + + + Sbjct: 192 LNGGATIVPLRYASAEQLAKTLQPYAQNGAKIAADAGRNAVLVSGDPQAREVMIGLIQAF 251 Query: 118 RPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVG------NVVHYEPSNVLILTGRA 171 + + P + A++ A L+ + G ++ + N ++ R+ Sbjct: 252 DVDMLAGQSFALFPADAGGAKEYAQALQTAASSQQGGALAGVVRILPMDRINAVLAVARS 311 Query: 172 ----STINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLS 227 + ++ ++ + T + +L+ + D+A +L Q + +Q + Sbjct: 312 ARQIEDLRRIDTMVGQRRRQSTRSWHVYYLQNGRSNDVAYVLQQAFTPGRVTAQPTPRNT 371 Query: 228 AKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTG 287 + ++++ + L G Sbjct: 372 TRPAGQSQSSAAQGGAGGINGGMTGGTSSMTPGGNGGLPQAGNTGDASQPQSGSSNPLLG 431 Query: 288 VSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 + + + I + Q N+++I A +S + T++ ++DI Q Sbjct: 432 SLTGAGGGSAG-NMDDAGTDPNTLRIVPNTQNNAVLIFATESEYGPIETMLRKIDILPLQ 490 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP 407 V ++AII EV + L G Q+ + G +A Q A Sbjct: 491 VRIDAIIAEVALNDTLRYGTQFFFREGGLN----------SAMQTAAATAATASTGGLLA 540 Query: 408 AWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL 467 A + + G + + L L S K +L++P ++ LDN+ A VG VP L Sbjct: 541 AAIPGFSNGFLLTGSSSSQLAMTL--LQSVTKVQVLSSPELMVLDNEPARLQVGALVPYL 598 Query: 468 SGSQTTSGD--NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG-- 523 + + + N V + G L VTP+VN V L+I QEVS VD+S N+ Sbjct: 599 TAQSQATIGQSAIINAVSYQQTGVILNVTPRVNNSGLVTLDISQEVSDVDTSINTNGISS 658 Query: 524 PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKR 583 P F R++Q+ V+V+ G+TV L GL+ D + VP L D+P++G +F + R++ Sbjct: 659 PAFQQRSVQSRVVVQDGQTVGLAGLIRDNNSRANGGVPFLKDVPVLGSVFGQQNNNRSRT 718 Query: 584 NLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 L++ + P +I D R+L+++ R + GS D Sbjct: 719 ELLILVTPHVIHDQRDARALTEDLRQNLRDAALVPQELNHLRPTGSADP 767 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 100/288 (34%), Gaps = 9/288 (3%) Query: 20 AGHAENEQYGANFNNADIRQF-VEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A NF + DIR +I+G L IDPSV GT + ++ S Sbjct: 91 MAEAGGNNITLNFTDTDIRDVSAQILGGLLKVNYTIDPSVHGTATFHTSQPLSATALLPT 150 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 +L+ G +V+ + +V+ + + IVPL A Sbjct: 151 LQVLLNQNGAAVVQTEG-LYRVLPIGAAAGITASAGQNGEAILNGG--ATIVPLRYASAE 207 Query: 139 DLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 LA L+ G+ + N ++++G +I +I+ DV Q L Sbjct: 208 QLAKTLQPYAQNGA--KIAADAGRNAVLVSGDPQAREVMIGLIQAFDV-DMLAGQSFALF 264 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG-PEKARQRITSLLKS 257 A A E L + + + +I+ R N+++ + + + + Sbjct: 265 PADAGGAKEYAQALQTAASSQQGGALAGVVRILPMDRINAVLAVARSARQIEDLRRIDTM 324 Query: 258 LDVEESEEGNT-RVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSS 304 + + + VYYL+ ++ ++ VL + + ++ Sbjct: 325 VGQRRRQSTRSWHVYYLQNGRSNDVAYVLQQAFTPGRVTAQPTPRNTT 372 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 24/198 (12%) Query: 146 QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDL 205 + + G+ + N + L + I + I +G + ++ + Sbjct: 80 PIQSGTASGSHMAEAGGNNITLNFTDTDIRDVSAQI-----LGGLLKVNYTIDPSVHGTA 134 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEE 265 +Q +S + + LL+ A +T L P A IT+ Sbjct: 135 TFHTSQPLSATALLPTLQVLLNQNGAAVVQTEGLYRVLPIGAAAGITASAGQNGEAILNG 194 Query: 266 GNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVIT 325 G T + L+YA A L + L ++ + I AD N+++++ Sbjct: 195 GAT-IVPLRYASAEQLAKTLQPYAQ------------------NGAKIAADAGRNAVLVS 235 Query: 326 ADQSVQEKLATVIARLDI 343 D +E + +I D+ Sbjct: 236 GDPQAREVMIGLIQAFDV 253 >UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYV5_DESOH Length = 538 Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats. Identities = 102/407 (25%), Positives = 173/407 (42%), Gaps = 29/407 (7%) Query: 214 SESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYL 273 K LL + R + Q+ ++ + ++ E T+V++L Sbjct: 138 EGVPWKEAFAGLLRTHGLTYNRIGDTLRIKTLADIQQDFAIENAYRKQQGERSVTQVFFL 197 Query: 274 KYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEK 333 KY++A ++ +L V+ + +G ++ D++ N++++ E+ Sbjct: 198 KYSEAADVANLLKPVTARAASAEGVKEAQQ--------SVVVDKRNNAVIVHTPLPGIEQ 249 Query: 334 LATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGV 393 A +I ++D QVL+EA IVE LG+QW Q TG A Q + Sbjct: 250 CAALIRQIDRPTRQVLIEAHIVETSKDTARQLGIQWGGVAKDKQHSWFTGATEGPAGQTL 309 Query: 394 ADYKKNGGITSANPAWDMFS------AYNGMAAGFFNGDWG-----VLLTALASNNKNDI 442 + NG +ANP + + G++ G+ D G LTAL + K +I Sbjct: 310 --FDANGVPVAANPTGNWAANFPASLGNTGLSLGYIYQDLGQSLIAAQLTALEEDGKLNI 367 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDA 502 L++PSI TLDN A G+DVP + +E K L VTP + + Sbjct: 368 LSSPSITTLDNSAAVIESGRDVPFQTVEDN------EVNIEWKKAVLSLAVTPHIIDAST 421 Query: 503 VLLEIEQEVSSVDSSSNS--TLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 + ++I+ +D S+ PT T+ + +++ G+T V+GGL S + V Sbjct: 422 LRVKIKTHKDELDWSNAVLTDGNPTIITKNAETEMILFDGQTTVIGGLNKQSSSQSQFGV 481 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 PLLG IP++G FR TS +++FI P I+ +K Sbjct: 482 PLLGRIPILGFFFRSTSRSNDMEEVLIFITPHILEPYTAATGAGADK 528 Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 73/173 (42%), Gaps = 14/173 (8%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 + + DI + + + GK I+I V G ++ + +E F +L + Sbjct: 98 PVTIHMTDTDIAVILRALTKAAGKNIIIGAGVSGRANINAEG-VPWKEA---FAGLLRTH 153 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 G + + + L++ A+++ I ++ R G+ VT++ L+ A D+A LL+ Sbjct: 154 GLTYNRIGD-TLRIKTLADIQQD-FAIENAYRKQQGERSVTQVFFLKYSEAADVANLLKP 211 Query: 147 MMDAGSVG--------NVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 + + +VV + +N +I+ I + +I+++D + Sbjct: 212 VTARAASAEGVKEAQQSVVVDKRNNAVIVHTPLPGIEQCAALIRQIDRPTRQV 264 >UniRef50_B6WRK6 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WRK6_9DELT Length = 651 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 118/672 (17%), Positives = 224/672 (33%), Gaps = 94/672 (13%) Query: 4 LNKITCCLLAALLMPCAGHAE---NEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 L I CCLL + + + + +N +I + + G + P+++G Sbjct: 9 LCWIFCCLLVTEGLCASSRSAFPFRAAFSHYADNENICTVLSAFARAEGYGSVCSPALKG 68 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 +S R + + S + Y+ G + + KT + + Sbjct: 69 QMSGRFEQ-VDPRTFLNGMRSAFGVRWYT-----QGHTVTFWNDSEKTEAFLAPST---- 118 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV 180 V A L +LR V N+L ++G +++L Sbjct: 119 --------------VSAAALRDMLRSAGMISPQLPVNLLHAQNLLSVSGPPIYLDQLRGA 164 Query: 181 IKRVD--VIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNS 238 +K + ++ L+YA AED+ +N + S L + + Sbjct: 165 MKAFEDAQGSRSVMRVFPLKYAWAEDM--KVNSMDSTVTIPGVASILQAMANGTPLTGSQ 222 Query: 239 LIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGN 298 + + + R L+ + + Sbjct: 223 VTVQPSAQGGLRGKGLIAMNASTD---------------------------TSQAAPAAS 255 Query: 299 ARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQ 358 SG +I AD + N++V+T + A VIA LD V + A IV++ Sbjct: 256 QGGKDQSGTPSGPSIIADPRVNAVVVTDAEYRMSYYAKVIADLDKPVELVEIHAAIVDID 315 Query: 359 DGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGM 418 + GV W+ + +T G A GI + A Sbjct: 316 SDFSRDFGVNWSGTGAYGKHWT---------GGGSAGGTSTSGIFPSAGASSAGGLSYST 366 Query: 419 AAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV 478 + + +TAL + + +L PS++T+DN AS V N Sbjct: 367 LYSHGSDYFLARVTALEEDGQARVLGKPSVLTMDNVQASLENTSSYYVPV------SGNE 420 Query: 479 FNTVERKTVGTKLKVTPQVNEG-----DAVLLEIEQEVSSVDSSSNSTLGP----TFNTR 529 + + + GT LKVTP + G D++ L + + D S+ ++ P Sbjct: 421 SSDLFKIDSGTVLKVTPHIIPGLPGQADSIKLMVSVQDDRDDGSNLFSVDPNNLSPIKQT 480 Query: 530 TIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFI 589 I +V G+++++GG + + + +P L +IP++G LF T + + ++ I Sbjct: 481 KINTQAIVGEGQSLLIGGHYYEIQSDAETGIPGLKNIPILGGLFGATGKKHQRMERLILI 540 Query: 590 RPTIIR------------DDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDE 637 P I+R D R+ ++ Y R ++ + + + P Sbjct: 541 TPRIVRMDTASNVPTRVDDPRFSRTPTQADYEERRPKEMPVGGCARRRELAPDVQPAPPV 600 Query: 638 NTFNSHAPAPSS 649 AP P++ Sbjct: 601 TVTPQPAPVPAT 612 >UniRef50_B8ESI9 General secretion pathway protein D n=1 Tax=Methylocella silvestris BL2 RepID=B8ESI9_METSB Length = 805 Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 128/587 (21%), Positives = 230/587 (39%), Gaps = 44/587 (7%) Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 ++V S Q + G + + +V + + + S Sbjct: 206 MTVVPVQHVSVQTINKLLEGFATRPGAIRVDSGTNMVIIVGTGVERRTAVDTVLSFDQDW 265 Query: 122 GDELVTRIVPLENVPARDLAPLLRQMMDAGSVG------NVVHYEPSNVLILTGR-ASTI 174 I P++N + L +++D+G G + SN +++ R + Sbjct: 266 MRGQSVGIFPVKNTTPEPIVVELEKILDSGEAGLSQNMVKLQAMNRSNAVLVVARKPELL 325 Query: 175 NKLIEVIKRVD--VIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVA 232 I R+D + ++ + Y A+ +A +L+ L + G S A A Sbjct: 326 RAAATWIARLDGSATASTGVKVYRVRYGDAKLIARLLSDLFTGGGGSSDSAANSLAPGSG 385 Query: 233 DKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE-- 290 + + ++G + S + S Sbjct: 386 SSVSTTDRLTGGTASLAASAGGGGSAGSSLGAGSGSSSSSSSLGAGAGSSSGAGSQSPFG 445 Query: 291 ---------------------KLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQS 329 G + V I AD NS+VI A+Q Sbjct: 446 TLGTAAGAAGGADSSAGGGAGSSSGGLGGGGGGKGPVLLPGVRIMADAANNSVVIYANQE 505 Query: 330 VQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNA 389 + + +LD + QV ++ I EV + LN GVQ+ + N G Sbjct: 506 SYRIIEKALEQLDRPKLQVAIDLTIAEVTLNDTLNYGVQFFLGSSNLGLGANNG--FVTN 563 Query: 390 AQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIV 449 + GG+ SA F+ G A ++ AL +L+ PS+V Sbjct: 564 TAAGVPLAQTGGVASAAGTLPGFNLTIGNAL-----SPRAIINALHQYTDVKVLSNPSLV 618 Query: 450 TLDNKLASFNVGQDVPVLSGSQT--TSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 +DN++A+ VG ++P+ +GS T ++ + V NT++ K G L+V P+VN V L++ Sbjct: 619 VVDNQVATLQVGDEIPIQTGSATVLSANNAVVNTIDYKNTGIILRVQPRVNFNGNVSLDV 678 Query: 508 EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 EQE+S + + S LGPTF+ R +++++LV +G+TV+L GL+ D + +P+ IP Sbjct: 679 EQEIS--NQAGTSALGPTFSQRKVKSSILVASGQTVLLAGLISDGVNGTKAGIPVADQIP 736 Query: 568 LVGQLFRYTSTE-RAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 ++G LF +S ++ L++FIRP IIRD +++E ++ R Sbjct: 737 VLGNLFNNSSNRLVSRTELIIFIRPQIIRDGVDASFVAEELRSKLRG 783 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 111/289 (38%), Gaps = 12/289 (4%) Query: 28 YGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 NF NA I + I+G LG +DP VQGTI++ S + S L Sbjct: 109 VDLNFENAPITAVAKVILGDVLGVGYAVDPRVQGTITLSSGRPVPKSRLLSVLESALRTS 168 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 ++ G +++ + + + SR G + +VP+++V + + LL Sbjct: 169 NAVLVNDAGG-YRIIPVDDAVGNGSVDRGGSRLEPGYGMT--VVPVQHVSVQTINKLLEG 225 Query: 147 MMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAED 204 G + +N++I+ G ++ + D Q + ++ + E Sbjct: 226 FATR--PGAIRVDSGTNMVIIVGTGVERRTAVDTVLSFDQDWMRGQSVGIFPVKNTTPEP 283 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP-EKARQRITSLLKSLDVEES 263 + L +++ + K+ A R+N++++ + + + + LD + Sbjct: 284 IVVELEKILDSG---EAGLSQNMVKLQAMNRSNAVLVVARKPELLRAAATWIARLDGSAT 340 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 +VY ++Y A + +L+ + +A + G+ +V+ Sbjct: 341 ASTGVKVYRVRYGDAKLIARLLSDLFTGGGGSSDSAANSLAPGSGSSVS 389 >UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lovleyi SZ RepID=B3E9T4_GEOLS Length = 891 Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats. Identities = 103/615 (16%), Positives = 216/615 (35%), Gaps = 74/615 (12%) Query: 12 LAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTI--SVRSNDT 69 + ++ A +A + +F + + ++ P ++ + S + Sbjct: 323 VTSVPKEVASNASAQMASIDFQ------VLGDTSRVT-VKVVGSPQIEEPVKSSGSVSFR 375 Query: 70 FSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTR- 128 + + L+ + + L++ + I + R Sbjct: 376 IKNAQLSRDLQRSLEAREFV-----SPVLRITPVQVKTKTGNDILVRVALKMDSGYELRR 430 Query: 129 ---IVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVD 185 +V L+ +A + + +N I K+ E V Sbjct: 431 EADLVYLDIKHPATMAKSIETAKGTAT----QKASSANGSSAPNAGDQIEKVAEQAAPVS 486 Query: 186 VIGTEKQQIIHLEYASA--------------------EDLAEILNQLISESHGKSQMPAL 225 + + LE+A A +++ ++ + + + Sbjct: 487 GKARYNGRKVTLEFADAEVRKIFQLLSEVSNKNFVLGDEVTGTISLKLVNVPWDQALDII 546 Query: 226 LSAKIVADKRTNSLIISGPEKARQRI--TSLLKSLDVEESEEGNTRVYYLKYAKATNLVE 283 L K + + ++++ + + + + +SE T ++ + YA ++V Sbjct: 547 LDTKGLDKREEGTIVLIRGKGKFKSLLDEEMEIRKSTLKSEPLQTAMFDVNYADLASIVS 606 Query: 284 VLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDI 343 + D IT D++TN +++ +S + + ++A LD+ Sbjct: 607 QFNSIKT------------------DRGLITQDQRTNKVIVKDVKSAVDDMRKILASLDV 648 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT 403 QV++EA IVE +LGV W + G+A Sbjct: 649 PEKQVMIEARIVEASSTFTQSLGVNWGIHYRDGSASIAGINSMDTNFGGLASTAPTSSGV 708 Query: 404 SANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 S +P ++ ++ N + L A S I++TP + TL++K A GQ Sbjct: 709 SGSPGAAAGISFGTLS---SNIKLDLRLNAAVSAGLVRIVSTPRVATLNHKSAKITQGQQ 765 Query: 464 VPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG 523 +P T+ + + L+VTP +N V+++I+ + S S+ N Sbjct: 766 IPY------TASTSDKIETKFVEAALALEVTPHINPNGTVVMKIDAKNDSPGSTGN---P 816 Query: 524 PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKR 583 P N + ++++ GET V+GG+ + VP L D+P +G LF+ T+R + Sbjct: 817 PAINKKQATTEMMLRDGETTVIGGIFVESESNNDDGVPFLADVPWLGGLFKSNETKRNRN 876 Query: 584 NLMVFIRPTIIRDDD 598 L++FI P II + Sbjct: 877 ELLIFITPRIINSNS 891 >UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A4Y8_ALHEH Length = 694 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 90/429 (20%), Positives = 177/429 (41%), Gaps = 32/429 (7%) Query: 183 RVDVIGTEKQQIIHL-------EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKR 235 +D E ++++ + ++ + L + E + +L A+ + + Sbjct: 286 TLDFQDVEVRRVLQILADFNDMNAVISDSVDGRLTLRLVEVPWDHALEIILEAQGLDVRE 345 Query: 236 TNSLIISGPEKARQRITSLLKSLD--VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK 293 +++ P + + V+E ++ + YA+A ++ +L G Sbjct: 346 RGNVLTFAPTEELAARDRAREEARRTVDEVAPLSSAFIQVNYARAEDIANLLKG------ 399 Query: 294 DEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 +S + + DE+TN L++ + + + ++ RLDI QVL+E+ Sbjct: 400 --------DETSLLSERGQVAIDERTNLLIVQDMERNIDDIRNLVNRLDIPVQQVLIESR 451 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 IV D +LGV++ G + G I + PA Sbjct: 452 IVIADDDFSRDLGVRFGYTATG--SLGSEGTAIGARPTPTPGIDGTDDLMVDLPAPAEAP 509 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 + + L+A+ + + +++++P ++T + + A+ G ++P + + Sbjct: 510 RLGLAIGRIGDRLLQLELSAMETEGRGEVISSPRVITANQREANIRQGVEIPYQEETASG 569 Query: 474 SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQN 533 + VE K L VTPQ+ D V++ +E +V P+ +T+++ Sbjct: 570 A-----TNVEFKEAVLGLTVTPQITPDDRVIMNLEVSNDTVGEV--FAGVPSIDTQSVTT 622 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 VLV GETVVLGG+ + S EQ +VP G +P VG LFR T + L+VF+ P I Sbjct: 623 QVLVDNGETVVLGGVYERASGEQTRRVPFFGSLPGVGWLFRNRLTFDEQSELLVFVTPRI 682 Query: 594 IRDDDVYRS 602 + + R+ Sbjct: 683 LDESLNARN 691 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 69/222 (31%), Gaps = 7/222 (3%) Query: 20 AGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFF 79 + +F + ++R+ ++I+ +I SV G +++R + + Sbjct: 277 EPTYTGDPITLDFQDVEVRRVLQILADFNDMNAVISDSVDGRLTLRLVE-VPWDHALEI- 334 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARD 139 IL+ G V N L + + + A D Sbjct: 335 --ILEAQGLDVRERGNVLTFAPTEELAARDRAREEARRTVDEVAPLSSAFIQVNYARAED 392 Query: 140 LAPLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHL 197 +A LL+ + G V E +N+LI+ I+ + ++ R+D+ + + Sbjct: 393 IANLLKGDETSLLSERGQVAIDERTNLLIVQDMERNIDDIRNLVNRLDIPVQQVLIESRI 452 Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 A +D + L + S + Sbjct: 453 VIAD-DDFSRDLGVRFGYTATGSLGSEGTAIGARPTPTPGID 493 >UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Burkholderia RepID=A2S716_BURM9 Length = 616 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 108/451 (23%), Positives = 190/451 (42%), Gaps = 32/451 (7%) Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINK---LIEVIKRVDVIGTEKQQIIHLEYASAEDL 205 + G V + TG S N+ + + + + L +E + Sbjct: 190 SPPAAGAVSTASVAGTGTETGDPSGDNRPISINLQQASLAAVFDAFARFTGLNIVVSERV 249 Query: 206 AEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEES 263 ++ ++ +S ALL A +A R S+I P E A + + Sbjct: 250 RGTVSLRLNNVRWRSAFDALLDAHGLAMARRGSVIWVAPVAELAERERQRFDAHARAAQL 309 Query: 264 EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLV 323 E +R + L+YA+A ++ +L A ++ AD +TN L Sbjct: 310 EPLASRGFVLRYARAADVQRLL-------------AGSAGQRILSKRGSVLADPRTNLLF 356 Query: 324 ITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTG 383 +T ++A +I +LD QVL+EA IVE G NLG + A + A + Sbjct: 357 VTDLSGRLAQIADLIGKLDTPSRQVLIEARIVEGDRGFSRNLGARLALRAPDAGERATGI 416 Query: 384 LPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDIL 443 + N + G +A +F+A + V L+AL + + I+ Sbjct: 417 VAGRNGTLAELAARPISGFDAATAGLTLFAA-------RASRLLDVELSALEAEGRGQIV 469 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAV 503 ++P +VT D A G ++P + V+ + KL+V PQ+ V Sbjct: 470 SSPRVVTADRTKAVVEQGAELPYQAKVGNGVSG-----VQFRRATLKLEVEPQITPDGRV 524 Query: 504 LLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLL 563 +L+++ SV + S GP +T+ +Q V V+ G TV +GG+ + ++ V++VPLL Sbjct: 525 ILDLDVAKDSVGEETAS--GPAIHTKHVQTRVEVENGGTVSIGGIFESDDRDDVTRVPLL 582 Query: 564 GDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 G IP++G LFR+ + + L+V+I PT++ Sbjct: 583 GKIPVLGALFRHRAQRAQRSELVVYITPTVV 613 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 97/329 (29%), Gaps = 22/329 (6%) Query: 8 TCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSN 67 T + +N N A + + + G I++ V+GT+S+R N Sbjct: 199 TASVAGTGTETGDPSGDNRPISINLQQASLAAVFDAFARFTGLNIVVSERVRGTVSLRLN 258 Query: 68 DTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVT 127 + + + LD +G ++ + + + +R + L + Sbjct: 259 N-VRWRSAFDAL---LDAHGLAMARRGSVIWVAPVAELAERERQRFDAHARAAQLEPLAS 314 Query: 128 RIVPLENVPARDLAPLLRQMMDA---GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 R L A D+ LL G+V+ +N+L +T + + ++ ++I ++ Sbjct: 315 RGFVLRYARAADVQRLLAGSAGQRILSKRGSVLADPRTNLLFVTDLSGRLAQIADLIGKL 374 Query: 185 DVIGTEKQQIIHLEYAS--------------AEDLAEILNQLISESHGKSQMPALLSAKI 230 D + + A D E +++ +G A Sbjct: 375 DTPSRQVLIEARIVEGDRGFSRNLGARLALRAPDAGERATGIVAGRNGTLAELAARPISG 434 Query: 231 VADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKA-TNLVEVLTGVS 289 + + + + + RV KA L + Sbjct: 435 FDAATAGLTLFAARASRLLDVELSALEAEGRGQIVSSPRVVTADRTKAVVEQGAELPYQA 494 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQ 318 + G + ++ IT D + Sbjct: 495 KVGNGVSGVQFRRATLKLEVEPQITPDGR 523 >UniRef50_A0B1R2 Type III secretion outer membrane pore, YscC/HrcC family n=18 Tax=Burkholderia cepacia complex RepID=A0B1R2_BURCH Length = 681 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 108/669 (16%), Positives = 209/669 (31%), Gaps = 66/669 (9%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 L C A N+ + N I F+ + G T ++DP V G IS Sbjct: 28 LTASLCMAPAQHARAADLRWRNKPFTIVANGKKIGDFIRELASSQGVTAVVDPKVDGVIS 87 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 R + Q +I YG + + D Sbjct: 88 GRFSG-----TPQQTLDTICSTYGLTWYYDGSFLYV--------------------DPAD 122 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 + T+++P+ + ++ L+ M +V + +N + + G + + + + Sbjct: 123 QSQTQMIPIPPNASGEIGRALQAMQIPDKRYTLVINDRANSVYVAGPRRYVELVRQAVGS 182 Query: 184 VDVIGTE----KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 V + L+Y A D I+ S + +P + + + Sbjct: 183 VGDPAANGAHADIRAFRLKYGWASDFT------INRSGKEVTVPGVATILRRLFGKGGGT 236 Query: 240 IISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA 299 + + V+ V L + + G + Sbjct: 237 TAAPSSTPLGQAAR-----QVKLGSGLTIAVPRLDFPDISGGPRQGGYGGADSGMGGGFS 291 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 ++ G I AD N++++ + ++I +LD R V + I+++ + Sbjct: 292 PFANNGGGDTLPQIVADPAINAVIVRDLPENMYRYQSLINQLDERPRIVEINVTIIDINE 351 Query: 360 GNGLNLGVQWANKNVGAQQFTNTGLPIFNAA---QGVADYKKNGGITSANPAWDMFSAYN 416 + +LG+ W G N GV + GI ++ Sbjct: 352 DSLDSLGIDWRLHTTHGDVQIGNGQNALNGNTQYNGVGNPPLTFGIGTSETGQTGTFMPT 411 Query: 417 GMAA-----GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 G+A G + ALA + + + P ++ LDN A V Sbjct: 412 GIALTASIGGSLRNYLLTRVNALAQKGQAQLRSKPKVLALDNTEAILENLTQFYVQVPGY 471 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEG------------DAVLLEIEQEVSSVDSSSN 519 S T GT +KVTP + + +V++ I+ + ++ Sbjct: 472 QDSSLYSVTT------GTSIKVTPMIVDEAIRNAAAVSGNPQSVMMSIDIQDGNIVPGQA 525 Query: 520 STLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE 579 + P R I ++ G+++++ G DD K S VP L DIPL+G LF+YT Sbjct: 526 VSNVPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVKLNKSGVPWLSDIPLIGNLFKYTDKS 585 Query: 580 RAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENT 639 + P ++ + +Y Q + +P+ + Sbjct: 586 GNHMERFYLLTPRVVTNASMYAPDGSPVNPGVDGPASQEGMSMYRPPDNDVAVPLTPKPL 645 Query: 640 FNSHAPAPS 648 + P+ Sbjct: 646 PGTKFGPPA 654 >UniRef50_A1WFQ3 General secretion pathway protein D n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WFQ3_VEREI Length = 720 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 121/586 (20%), Positives = 220/586 (37%), Gaps = 67/586 (11%) Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 E ++ + L + S I + + + + PL Sbjct: 141 AEMATILRPMVPPEALIRVDTVRNLLVLAGSRAQAEGWLDIISTFDVNLLKGMSVGVFPL 200 Query: 133 ENVPARDLAPLLRQM---------------------------------------MDAGSV 153 + V +++ L+ + + Sbjct: 201 KYVSVKEVEAALQWLSTGGAPRQNNQAADRPVSAIAMPGAAPGGTAAGPADNMPLPLAGA 260 Query: 154 GNVVHYEPSNV-LILTGRASTINKLIEVIKRVDVIGTEKQQ----IIHLEYASAEDLAEI 208 V+ E N L++T RA+ +++ I+R+D + I ++ +A LA + Sbjct: 261 VRVLPIERINSILVVTPRAAYLDEARRWIERLDQPSDNSAEPQLFIYQVQNVNARHLASV 320 Query: 209 LNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNT 268 L+ + A + T+S S L + Sbjct: 321 LSGIFGTKPAPGTAANSGVAPGLPAATTSSNSNSSNSSPVIEGL----WLGTGAIGSSQS 376 Query: 269 RVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQ 328 R + + +G + + + A+ N+ + ADE NS+++ + + Sbjct: 377 RFGGFRSGR------FGSGQATTGASGARDTPSAPAVAALGNIRVMADELNNSVLVWSTR 430 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFN 388 + K+ + + RLD+ QVL+EA I+EV + L G+QWA + + G Sbjct: 431 AEYAKIESTLRRLDLPPTQVLIEASIIEVTLNDDLRYGLQWAFNDSRSGIDRGQG----- 485 Query: 389 AAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSI 448 + TS A A G +L L++ ++A+PS+ Sbjct: 486 -------ALSSRDGTSTGGILGGALAGFSYALKSPAGAVRAMLNVLSAKTTVKVVASPSL 538 Query: 449 VTLDNKLASFNVGQDVPVLSGSQTT-SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 + LDN AS VG P+ +G+ + G +E K G L VTP VN G+ V ++I Sbjct: 539 MVLDNHTASIAVGDQTPIQAGTTSNLEGTVTSTNIEYKDTGVNLVVTPSVNAGNIVTMQI 598 Query: 508 EQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIP 567 +Q V+ V + T F R + + V V++GE++V+GGL+ + S S +P+L +P Sbjct: 599 DQSVTDVGAKDEVTNQRAFLQRQLSSKVSVRSGESIVMGGLIQESSSSTKSGIPVLHALP 658 Query: 568 LVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQ 613 L G LF T + + L+V I P ++R D R +S+E R + Sbjct: 659 LFGNLFGTTVNDGRRTELLVIITPRVVRSDIDIRQVSEELRDRMKG 704 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 115/332 (34%), Gaps = 40/332 (12%) Query: 19 CAGHAENEQYGANFNNADIRQFVEI-VGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 E F A I + V +G L ++ P + G+I++ + + + Sbjct: 19 PVPPPEGAPSSFRFEEAPIAEVVRTMLGDILKVDYVLHPPISGSITLATQQPVAPDQAIF 78 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTR--IVPLENV 135 + L G +++ G V R +K + + + +VPL+ + Sbjct: 79 LLETALQANGLAMLRDPRGAYHVGRPETLKGIGAAVRQAGVGSGPLPPGSGAVVVPLQYI 138 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQ-- 193 A ++A +LR M+ ++ + N+L+L G + +++I DV + Sbjct: 139 GAAEMATILRPMVPPEAL--IRVDTVRNLLVLAGSRAQAEGWLDIISTFDVNLLKGMSVG 196 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQ------------------------------MP 223 + L+Y S +++ L L + + +P Sbjct: 197 VFPLKYVSVKEVEAALQWLSTGGAPRQNNQAADRPVSAIAMPGAAPGGTAAGPADNMPLP 256 Query: 224 ALLSAKIVADKRTNSLIISGPEKA-RQRITSLLKSLDVEE--SEEGNTRVYYLKYAKATN 280 + +++ +R NS+++ P A ++ LD S E +Y ++ A + Sbjct: 257 LAGAVRVLPIERINSILVVTPRAAYLDEARRWIERLDQPSDNSAEPQLFIYQVQNVNARH 316 Query: 281 LVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 L VL+G+ A + G Sbjct: 317 LASVLSGIFGTKPAPGTAANSGVAPGLPAATT 348 >UniRef50_B8KPH7 General secretion pathway protein D n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPH7_9GAMM Length = 770 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 140/585 (23%), Positives = 244/585 (41%), Gaps = 39/585 (6%) Query: 54 IDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPG-- 111 +D G ++ + L L + + +DN ++ + + G Sbjct: 203 VDDIAAGYSTMVIPLQYISASAMASILEPLAEKD-AFVRIDNIRALLMMAGTREQLSGWL 261 Query: 112 MIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMM--------DAGSVGNVVHYEPSN 163 I + + + + PLEN + L +M D + V+ E N Sbjct: 262 EIVSTFDVDLLAGMSVGMFPLENSSVEETLAALEALMEAAGGEEGDITGIVRVLPMERLN 321 Query: 164 V-LILTGRASTINKLIEVIKRVDVIGTEKQQ----IIHLEYASAEDLAEILNQLISESHG 218 L++T RA ++++ I+R+DV + + + ++ +A LA++LN + + Sbjct: 322 SILVVTPRAHYLDRVGSWIERIDVDPDARFEKRLYVYPVQNTTATRLAQLLNSIYAGGAA 381 Query: 219 KSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKA 278 S +A ++ PE I+S + + V + Sbjct: 382 NSGGARQQNASRTPGDQSAVAPGLSPESIGGGISSGGAAGIGGGGGGSISGVGASGGSAG 441 Query: 279 TNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVI 338 ++ G +V + ADE+ N+L++ AD + + Sbjct: 442 QGARAAAVAMTSVSMGSSGTGTNELV-----DVRVVADEENNALMVYADGKQYGIVKEAL 496 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKK 398 +LD+ QV++EA I+EVQ + L G++W KN G+ Sbjct: 497 KQLDVVATQVIIEASIMEVQLIDELRYGLEWTFKN------------------GLGSNYD 538 Query: 399 NGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASF 458 G +A A A GD +L AL+ + ++++TPS++ LDN +A Sbjct: 539 GLGTLAAGAAGPAAVAGFSYTVSNSVGDISAVLNALSEESLINVISTPSVMVLDNHVAFI 598 Query: 459 NVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSS 518 +VG VPVL G T+G N + + G +L V P VN G V ++IEQ V V + Sbjct: 599 SVGDQVPVLQGQTITNGGNSVQNITYRDTGVQLSVRPSVNAGGLVTMDIEQSVIDVGAID 658 Query: 519 NSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTST 578 ++T F RTI + V V++ E+VVLGGL+ + S S VP+L +IPL G LF T+T Sbjct: 659 SATGQRAFLDRTINSRVAVRSSESVVLGGLIRENSSLGDSGVPILREIPLFGSLFGTTTT 718 Query: 579 ERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKS 623 + + L+V I P + ++D R++S E + R + R +S Sbjct: 719 DSRRTELLVIITPRALYNEDELRAVSDEMREQVRFMELVRDPPRS 763 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 122/297 (41%), Gaps = 11/297 (3%) Query: 25 NEQYGANFNNADIRQFVE-IVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 + NF A + + V IVG L ++D +QG +++R+ + E S+L Sbjct: 111 GDDVSLNFEQAPLDEVVHAIVGDILQLDYVVDRPIQGKVTLRTRTPIPRAELLVVLESLL 170 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 + +I D+G + S + G T ++PL+ + A +A + Sbjct: 171 KAHDALMIRGDDGRYLITGSQQAMRLRPDVTSVDDIAAG--YSTMVIPLQYISASAMASI 228 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYAS 201 L + + + + +L++ G ++ +E++ DV + LE +S Sbjct: 229 LEPLAEKDAFVRI--DNIRALLMMAGTREQLSGWLEIVSTFDVDLLAGMSVGMFPLENSS 286 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK-ARQRITSLLKSLDV 260 E+ L L+ + G+ + +++ +R NS+++ P R+ S ++ +DV Sbjct: 287 VEETLAALEALMEAAGGEEGDITGI-VRVLPMERLNSILVVTPRAHYLDRVGSWIERIDV 345 Query: 261 EESE--EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITA 315 + E VY ++ AT L ++L + G AR+ ++S + + A Sbjct: 346 DPDARFEKRLYVYPVQNTTATRLAQLLNSIYAGGAANSGGARQQNASRTPGDQSAVA 402 >UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FD61_DESAA Length = 566 Score = 288 bits (736), Expect = 6e-76, Method: Composition-based stats. Identities = 110/489 (22%), Positives = 189/489 (38%), Gaps = 44/489 (8%) Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 D+AP R + + E VL R ++ +V G ++ Sbjct: 81 AEEEDMAPE-RPLPSQPVTMRMKDSEVGVVLRAIARGVG----QNLLINSNVSGRVSVEV 135 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 + + L G +I+ + + + R + L Sbjct: 136 KAVPWNEVFLSILNSQGLRYAWEGDI-------IRIMTAEDMEKDLAVQQVQERTKRQKL 188 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA-RKPSSSGAMDNVAI 313 + E +V + YA LVE L + E + K SG++ ++ Sbjct: 189 VAK----SVEPLLMKVVQIDYADPEGLVEPLNSILATSAGENAASKSKNDKSGSVVRGSV 244 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN-- 371 D+ NSLV+ A + EK+ +I +LD QV ++A IVE +LGVQW Sbjct: 245 DVDKHNNSLVLMAVREDLEKMLALINKLDRPPYQVHIKANIVETTRDTARDLGVQWGWMY 304 Query: 372 ---KNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA-------- 420 ++G + + D GG T+ + + NG+ Sbjct: 305 GRYDSLGNDTDFWLTPGGNSGSAASRDAPLTGGYTAGTGSKGVSGQGNGINFPVDFEDAM 364 Query: 421 ---------GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 + V L+ALA K +IL+TPSI TLDN+ AS G +VP ++ ++ Sbjct: 365 GATMGLMFGKVGSNILEVQLSALADAGKINILSTPSITTLDNQTASTENGTEVPYVTINE 424 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTI 531 V+ K L++TP V + + +++ + VD S N P + Sbjct: 425 DGD-----REVKFKDATLMLEITPHVIDEGQMKMKVSIKKDEVDLSRNVDGNPFILKKRT 479 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 + +++V+ GETVV+ GL + E + +P L DIP +G LF+ S A +++F+ P Sbjct: 480 ETSLIVRNGETVVISGLSKTRNTEGDTGIPWLKDIPGLGYLFKSESKSEAMEEVLIFLTP 539 Query: 592 TIIRDDDVY 600 T++ Sbjct: 540 TVLPKPGEA 548 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 74/200 (37%), Gaps = 29/200 (14%) Query: 17 MPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 M ++ ++++ + + + +G+ +LI+ +V G +SV E Sbjct: 86 MAPERPLPSQPVTMRMKDSEVGVVLRAIARGVGQNLLINSNVSGRVSVEV-KAVPWNE-- 142 Query: 77 QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSR-------PGVGDELVTRI 129 FLSIL+ G + ++++ + +++ + R + L+ ++ Sbjct: 143 -VFLSILNSQGLRYAWEGD-IIRIMTAEDMEKDLAVQQVQERTKRQKLVAKSVEPLLMKV 200 Query: 130 VPLENVPARDLAPLLRQMMDAGS-----------------VGNVVHYEPSNVLILTGRAS 172 V ++ L L ++ + G+V + +N L+L Sbjct: 201 VQIDYADPEGLVEPLNSILATSAGENAASKSKNDKSGSVVRGSVDVDKHNNSLVLMAVRE 260 Query: 173 TINKLIEVIKRVDVIGTEKQ 192 + K++ +I ++D + Sbjct: 261 DLEKMLALINKLDRPPYQVH 280 >UniRef50_Q5P5P1 Fimbrial type-IV assembly protein PilQ n=4 Tax=Betaproteobacteria RepID=Q5P5P1_AZOSE Length = 721 Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats. Identities = 95/512 (18%), Positives = 194/512 (37%), Gaps = 61/512 (11%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 P+ ++ A+ +R ++ + Y+ N +L R + ++++ + Sbjct: 230 PVTSMTAQPQGDNVRLLVAPTGLWEHNAYQSDNQFVLEVRR-VVEDPNKLVQGSRGQYSG 288 Query: 191 KQQIIHLEYASAEDLAEI------------------LNQLISESHGKSQMPALLSAKIVA 232 ++ ++ + + ++ L + + + +L AK + Sbjct: 289 EKLSLNFQNIDVRSVLQVIADFTNFNIITSDSVQGNLTLRLKDVPWDQALDIILQAKGLD 348 Query: 233 DKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE 290 ++T ++I P E A + L + + E T + + Y KA + + L + Sbjct: 349 MRKTGNVIWIAPSEELAMREKLQLEAQAQIGDLEPVQTESFQINYHKAKEIFDFLKSKDQ 408 Query: 291 KLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLV 350 + ++ DE++N L +T S + + ++ +D+ QV++ Sbjct: 409 TM--------------LSKRGSVVMDERSNKLFVTDVVSRLDAIRRLVGEIDLLPRQVMI 454 Query: 351 EAIIVEVQDGNGLNL-------------------G--VQWANKNVGAQQFTNTGLPIFNA 389 EA IVE +L G ++ A G + A Sbjct: 455 EARIVEANKDFARDLGVRLGVGGVGGRTVGFDANGRPIRRATVGGGLENTGFNAGQTVAA 514 Query: 390 AQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIV 449 G + + + L+AL S+ + I+++P ++ Sbjct: 515 TDAQVATVPGGLNVNLPAPGGSGVLSAVLWNNTATRFLNLELSALESDGRGRIVSSPRVL 574 Query: 450 TLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQ 509 T + A G +P + + + +++ + LKV PQ+ V L + Sbjct: 575 TANQVEAVIEQGTKIPYPEKTSSGAA-----SIKFEKAVLSLKVKPQITPEGRVQLFVLV 629 Query: 510 EVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLV 569 D + + PT T+ IQ VLV+ G TVV+GG+ ++ + V+++PLLG++PLV Sbjct: 630 NKDRPDFARSVEGTPTVVTKNIQTEVLVENGGTVVIGGIYEEEETDSVTRIPLLGEVPLV 689 Query: 570 GQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 G LFR T + L++FI P I+ D R Sbjct: 690 GALFRNTIKNSKRSELLIFITPRIVADSLTLR 721 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 102/323 (31%), Gaps = 24/323 (7%) Query: 21 GHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL 80 G E+ NF N D+R ++++ I+ SVQG +++R + Sbjct: 284 GQYSGEKLSLNFQNIDVRSVLQVIADFTNFNIITSDSVQGNLTLRL-KDVPWDQALDI-- 340 Query: 81 SILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDL 140 IL G + N + ++ G + + T + A+++ Sbjct: 341 -ILQAKGLDMRKTGNVIWIAPSEELAMREKLQLEAQAQIGDLEPVQTESFQINYHKAKEI 399 Query: 141 APLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLE 198 L+ G+VV E SN L +T S ++ + ++ +D++ + I Sbjct: 400 FDFLKSKDQTMLSKRGSVVMDERSNKLFVTDVVSRLDAIRRLVGEIDLLPRQVM--IEAR 457 Query: 199 YASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSL 258 A + G A +R G E + + Sbjct: 458 IVEANKDFARDLGVRLGVGGVGGRTVGFDANGRPIRRATVG--GGLENTGFNAGQTVAAT 515 Query: 259 DVEESE-EGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADE 317 D + + G V A VL+ V + + S+ + I + Sbjct: 516 DAQVATVPGGLNV----NLPAPGGSGVLSAVLWNNTATRFLNLELSALESDGRGRIVSSP 571 Query: 318 QTNSLVITADQSVQEKLATVIAR 340 + V+TA ++ VI + Sbjct: 572 R----VLTA-----NQVEAVIEQ 585 >UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax=Methylophilaceae RepID=Q1GYG5_METFK Length = 723 Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats. Identities = 90/444 (20%), Positives = 178/444 (40%), Gaps = 60/444 (13%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ + L + + + ++S+K + ++T ++I P E A + L Sbjct: 301 LNIVTSDTVTGNLTLRLKDVPWDQALDIIMSSKGLTQRKTGNVIWVAPSDEVAAKEKLLL 360 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 S +EE E T V+ L+Y KA N +++ + Sbjct: 361 EASQQIEELEPMRTEVFTLRYQKAENFKNIISD--------------SKQKILSKRGSAV 406 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 D +TN++ + E++ ++I ++DI QV++E+ +V + G +LG ++ + Sbjct: 407 VDARTNTVFVQDTAKHLEEVQSIINKIDIPVKQVMIESRLVIADEKFGRSLGARFGVQKQ 466 Query: 375 GAQQFTNTGLPIF---------------------------------NAAQGVADYKKNGG 401 A T G + V G Sbjct: 467 QASGDTRYGSSGTLGNTITQRTVDPTTGVITETIANRVGSSTLATTSIPGTVGVGVSPDG 526 Query: 402 ITSANPAWDMFSAYNGMAAGFF----NGDWGVLLTALASNNKNDILATPSIVTLDNKLAS 457 N + +A+ A F + L+AL ++ + I+++P + T + + A Sbjct: 527 AQDLNVNLPVANAFGNFAFSLFRLPAGFLLNLELSALETDQRGKIVSSPRVTTANQQKAI 586 Query: 458 FNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS 517 G +P + + + V+ K L+VTPQ+ + +++++E + V Sbjct: 587 IEQGTQIPFQQATSSGA-----TAVQFKNASLSLEVTPQITPDEKIIMDLEVKKDKVG-- 639 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 P+ +T+ +Q VLV GET VLGG+ + + V KVP GD+P +G +F+ Sbjct: 640 VVFNNVPSIDTQRVQTQVLVANGETAVLGGIYEQTERNDVDKVPFFGDLPFLGNVFKRRV 699 Query: 578 TERAKRNLMVFIRPTIIRDDDVYR 601 + K L++FI P ++ + R Sbjct: 700 KQSDKTELLIFITPKVMDESLSLR 723 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 84/270 (31%), Gaps = 8/270 (2%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQE 74 L+ E+ NF N D+R ++++ G I+ +V G +++R + Sbjct: 266 LVQGSKPGYAGEKLSLNFQNIDVRSVLQVIADFTGLNIVTSDTVTGNLTLRL-KDVPWDQ 324 Query: 75 YYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 I+ G + N ++ S + + + T + L Sbjct: 325 ALDI---IMSSKGLTQRKTGNVIWVAPSDEVAAKEKLLLEASQQIEELEPMRTEVFTLRY 381 Query: 135 VPARDLAPLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 A + ++ G+ V +N + + A + ++ +I ++D+ + Sbjct: 382 QKAENFKNIISDSKQKILSKRGSAVVDARTNTVFVQDTAKHLEEVQSIINKIDIPVKQVM 441 Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKI-VADKRTNSLIISGPEKARQRI 251 L A E L ++ + + + T + + I Sbjct: 442 IESRLVIAD-EKFGRSLGARFGVQKQQASGDTRYGSSGTLGNTITQRTVDPTTGVITETI 500 Query: 252 TSLLKSLDVEESEEGNTRVYYLKYAKATNL 281 + + S + + T + A +L Sbjct: 501 ANRVGSSTLATTSIPGTVGVGVSPDGAQDL 530 >UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Reinekea blandensis MED297 RepID=A4BAN5_9GAMM Length = 709 Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats. Identities = 120/606 (19%), Positives = 232/606 (38%), Gaps = 46/606 (7%) Query: 12 LAALLMPCAGHAENEQY-GANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTF 70 +A+ + A+ + A ++ + + S G + V + Sbjct: 126 IASSGRAASNSAQAQPVASAQSSSTPVSGA----KEISDVDFRRTESGAGQVVVGFDRPN 181 Query: 71 SQQEYYQFF-LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRI 129 + Y+ ++ + Y+V + L V+ A + + + ++ Sbjct: 182 ASASVYEEGGDIVIQVDDYNVPSELRRKLDVIDFATAVHYISVYNEDEHALIRLDVDGAY 241 Query: 130 VPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 L R + + Q+ + + + P L+ I + +V++ + Sbjct: 242 DYLAYQSDRQMIVEVNQLTEDEAEARIKEKFPYTGEKLSLNFQDIE-VRDVLQIIANY-- 298 Query: 190 EKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKA 247 I +++ ++ + ++ + +L + ++T ++++ P E A Sbjct: 299 -----IGFNLVASDSISGTITLRLNNVPWDQALELVLKTNGLDKRQTGNVLLVAPAAELA 353 Query: 248 RQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE--------KLKDEKGNA 299 Q L E+ T + YA+A ++ +L S + N+ Sbjct: 354 EQERLELEAREQAEKLAPLRTEYVQVNYARAADIASILRSSSSAAAAAANVGDESGGVNS 413 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 S +++ DE+TN+L+IT + + + I+ D+ QVL+EA IV + Sbjct: 414 LPSSGGFLSSRGSVSVDERTNTLIITDTSVNLDGIRSAISFFDVPVEQVLIEARIVSART 473 Query: 360 GNGLNLGVQWANKNVGAQQFTNTGLPIFN--------AAQGVADYKKNGGITSANPAWDM 411 G LGV+W +Q TG + D PA Sbjct: 474 SVGDQLGVRWGGAIFPSQNVFATGTVESSASIESDIYGGSPNPDLTFPDAFAVNLPATGN 533 Query: 412 FSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 S++ D + ++AL S + ++++ P IVT D + AS GQ+V + Sbjct: 534 ASSFAVGLIADNLLDLDLEISALESLGEAEVVSQPKIVTSDGQAASIFSGQNVAFPAEDG 593 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTI 531 T + G L VTPQV D V+L + S+ + G +T T+ Sbjct: 594 GT---------QFIEAGLNLNVTPQVTPDDKVILTLTVNQDSL-----AAGGGAIDTNTV 639 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 VLV+ G T+VLGG+ + V K P+LGD+P+VG LF+ T+T + L++FI P Sbjct: 640 STQVLVENGVTLVLGGVYRTEKTQLVEKAPILGDLPVVGNLFKRTTTSDERSELLIFITP 699 Query: 592 TIIRDD 597 +I++ Sbjct: 700 KLIQNG 705 >UniRef50_A8UYL2 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UYL2_9AQUI Length = 550 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 112/583 (19%), Positives = 240/583 (41%), Gaps = 49/583 (8%) Query: 30 ANFNNADIRQFVEIVGQHLGKTILIDPSVQG----TISVRSNDTFSQQEYYQFFLSILDL 85 F + V+ + + + K ++IDP+++ +++ S E + IL Sbjct: 1 MKFEGVKLDTVVKALAKVVKKNVIIDPNIKDLLKTDVNIYIQKPLSVNEAFNL---ILKE 57 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLA-PLL 144 YG + +++ K+ R+ ++ S G + +S + + L R+ + A + L Sbjct: 58 YGLIAVPVNDDIYKITRAGELEISIGELDESDIEKIIELLKRRV----SASAEIVIDKTL 113 Query: 145 RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 + + S N+ E + L + + I + ++ +L+ + +D Sbjct: 114 KTLYVRDSEKNIKKLEKT----LKKYIDKL-LAEKAIGIEERPEAVVTKVFYLKTINIDD 168 Query: 205 LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKS--LDVEE 262 ++L IS+ ++ P N+L+I+ + ++ +LK + Sbjct: 169 AEQLLAPHISKETLITKAPTF-----------NALVITDTTERIKKYEEVLKEFLVTSPA 217 Query: 263 SEEGNTRVYYLKYAKATNLVEVLTGV-SEKLKDEKGNARKPSSSGAMDNVAITADEQT-- 319 + + T ++YL+Y ++++ + SE G A K ++ A ++ T Sbjct: 218 ARKPVTEIFYLRYISPAEFIKMIEPIRSEAGLVLTGGAVKIETAQGQGQQAQAKEKVTPI 277 Query: 320 ----NSLVITADQSVQEKLATVIAR--LDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 N++++T + EK+ + D+ QV +EA I+EV+ LG+ W+ Sbjct: 278 LKEFNAVMLTDYPEIIEKIKEQFSEYISDVPP-QVKIEARILEVRKEVVRELGINWSALL 336 Query: 374 VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTA 433 A+ ++ GV G + + + A + L+A Sbjct: 337 SNAKV-----QQSWSGGAGVNLGVGQAGAITPSLSATPGGILTFTYAKGALNALNLRLSA 391 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 K LA P+IVT++ + A GQ++P + +G + +++ K +L V Sbjct: 392 FERLGKIKSLAKPTIVTINGQNAVIKQGQEIPYQT--AVIAGGSSVPSIQFKEAVLELNV 449 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 P ++ +LL++E + + +GPT + + V+V G+T+V+GG++D + Sbjct: 450 LPIISPDGRILLDMELKQE--IPGVQTPIGPTIIKKQVSTKVIVNNGDTIVIGGIIDSLN 507 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 + V L +P++ LF S L++FI P+II + Sbjct: 508 RNTKEGVAGLVRVPILKWLFGQESKHIQDIELLIFITPSIITE 550 >UniRef50_Q9I3W2 Probable type II secretion system protein n=1 Tax=Pseudomonas aeruginosa RepID=Q9I3W2_PSEAE Length = 759 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 123/664 (18%), Positives = 246/664 (37%), Gaps = 107/664 (16%) Query: 25 NEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQ---GTISVRSNDTFSQQEYYQFFL 80 N + + F+ E+ G LG I+ +++ ++VR + Q Y+ Sbjct: 100 KADISLNVEDVQLAAFINEVFGNILGLPFEIESALKEKTDRVTVRLEQPQTAQMVYEVAR 159 Query: 81 SILDLYGYSVITLDNGF-LKVVRSANVKTSPGMIADSSRPGV---GDELVTRIVPLENVP 136 +L YG ++ + + ++ + P ++ V + V L +V Sbjct: 160 QVLVNYGVEILHQGDIYRFQIKQVGLSPDEPPILISGEARPSVPIAYRPVFQFVALHSVD 219 Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 +D+ P L + +V+ + L+L G +S +N+ E ++ +D + + Sbjct: 220 PKDVIPWLNSAYEKSG-LSVMADGARSGLMLKGMSSIVNQATEAVRLLDQPFMRGRHSLR 278 Query: 197 LE--YASAEDLAEILNQLIS-ESHGKSQMPALLSAKIVADKRTNSLIISGPEKAR-QRIT 252 ++ + SA D+A L +I+ + + A+ S +V + +N LI+ + + Sbjct: 279 IDPAFVSAADMASQLKTVIAAQGYSVGIGEAVGSIMLVPLESSNGLIVFANDGQLLDLVR 338 Query: 253 SLLKSLDVEES--------EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPS- 303 + +D E+ Y + + T L + L + E Sbjct: 339 EWAQQVDRAPMAVAAGIGEEKEGLFFYEARNTRVTELAKSLRALVSGFAGEGAYGITSGL 398 Query: 304 ------------------------------------------------SSGAMDNVAITA 315 ++G + I Sbjct: 399 QSSASKRSGGGRRAGDDGAAPAVAPLLQAAGAAALVGGDGANGLLGGLAAGISGSGTIVE 458 Query: 316 DEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVG 375 DE N+++ +++ ++ +D QVL+E + V + LGV+W N Sbjct: 459 DENRNAILFRGAARTWQQMQGLLREMDKPARQVLIEVTVASVSLSDTQELGVEWEMLNGS 518 Query: 376 AQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALA 435 T+TG G G + + A+A Sbjct: 519 FNSATSTGSKGSAGKGGFNYVINTAGGNT------------------------AAIQAMA 554 Query: 436 SNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG-----SQTTSGDNVFNTVERKTVGTK 490 N + +LATP I+ + A+ NVG+D+P+ + S T N+ N + ++ GT Sbjct: 555 DNQRVRVLATPRILVKSGEQANINVGRDIPIPTAQVNDDSTTAGSTNLRNEIAYRSTGTI 614 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTL--------GPTFNTRTIQNAVLVKTGET 542 L V P V V L + QE+S SS P + +++ ++ +K+G + Sbjct: 615 LNVAPVVYSDSRVDLTVSQELSDSGGSSGGGGKASGGGISAPEISRTSLETSLTLKSGGS 674 Query: 543 VVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRS 602 V++GGL+ D + + VPLL DIP +G LF + + +++ I+P ++ D R Sbjct: 675 VLMGGLIRDNITDSNAGVPLLKDIPGIGFLFGRQKAVKTREEVIMLIQPYVLESDADARE 734 Query: 603 LSKE 606 ++++ Sbjct: 735 VTEK 738 >UniRef50_A0LPH6 General secretion pathway protein D n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPH6_SYNFM Length = 793 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 127/592 (21%), Positives = 229/592 (38%), Gaps = 44/592 (7%) Query: 56 PSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIAD 115 V+ I + ++ S + + + L V S++ S + Sbjct: 209 DGVRPVIVIYKLRYLDVKQALNTVKSFITPGRPLISDTMSNSLIFVESSDNAHSIVEVLR 268 Query: 116 SSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEP----------SNVL 165 + + E+ +V L+++ +D + +M + + + VL Sbjct: 269 TMDMNILQEVSMEVVQLQSIAPQDAVQGMDALMGKLGLFKETNLKNNLAFIPLVNFRGVL 328 Query: 166 ILTGRASTINKLIEVIKRVDVIGTEKQQ---IIHLEYASAEDLAEILNQLISESHGKSQM 222 +L + + I +D G E + + +++ A+D+ +IL Q+ + + + Sbjct: 329 VLAQTPELLKTARQWINALDTHGGEVGEQIYVYYVQNGLAKDIGDILLQVYGIAAPERRP 388 Query: 223 PALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYL----KYAKA 278 + + S G + S R +Y Sbjct: 389 EKQVVQSTTGRRTFGSGSSFGGGSTSSGFGTSSSGSSFGSSSSSRFRSASSDSSGQYGGT 448 Query: 279 TNLVEVLTGVSEKLKDEKGNAR-----KPSSSGAMDNVAITADEQTNSLVITADQSVQEK 333 + TG + +A + + V I DE N++V+ A+ + K Sbjct: 449 GSAFGQTTGSGASAQRAARSAAGRAGGQSPPTSVSPEVMIIPDEVNNAIVVRANATDYAK 508 Query: 334 LATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGV 393 + I LDI VL+E II EV G++W A G Sbjct: 509 IKKTIEALDILPRAVLIEVIIAEVALTKDFEYGLKWYF-----------SHAEVGAGVGQ 557 Query: 394 ADYKKNGGITSANPAWDMFSAYNGMAAGFFNG--DWGVLLTALASNNKNDILATPSIVTL 451 GG++ S+ GMA + + D +L+ L+S K IL+TP+++ Sbjct: 558 GSLNGLGGVSDIALNLAGISSAGGMALAWVSNAKDMAGVLSWLSSKTKVKILSTPTLLAT 617 Query: 452 DNKLASFNVGQDVPVLSGSQTTSG----DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEI 507 DNK A+ VG PV SGS T D VF+T+E + GT L VTP +N G V LE+ Sbjct: 618 DNKEAAIQVGGRTPVPSGSYTGGTSTTLDTVFSTIEYEETGTILTVTPHINAGGLVRLEV 677 Query: 508 EQEVSSVDSSSNS---TLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLG 564 EQ + V +++ PTF R ++ +L + G TVV+GG++D+ ++ + P+L Sbjct: 678 EQTIRRVGANATVGVNNTAPTFTERNLKTTLLAQDGSTVVIGGIIDEIDRDTTTGAPMLV 737 Query: 565 DIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQ 616 D+P++G LF R + L++ I P ++ +E + R +Q Sbjct: 738 DVPIIGPLFGQKGKSRERTELLIAITPRVVE--RRGSDSLREFVGKMRDLRQ 787 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 114/300 (38%), Gaps = 9/300 (3%) Query: 18 PCAGHAENEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY 76 G E ++ NF+ AD+ + ++ G +L ++DP++QG IS+ F++ E Sbjct: 103 VPVGEGERQKVVFNFDKADLGEVTSQVFGDYLKLNYVLDPTLQGRISMYLEGEFNRTELL 162 Query: 77 QFFLSILDLYGYSVITLDNGFLKVV--RSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 Q + + S+ + RSA+ S G V I L Sbjct: 163 QMIIKAFEANNVSITPQKGLYYIQPLQRSASSSLSLADTITLKPDKDGVRPVIVIYKLRY 222 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQ 192 + + ++ + G ++ SN LI + + ++EV++ +D+ Sbjct: 223 LDVKQALNTVKSFITPGRP--LISDTMSNSLIFVESSDNAHSIVEVLRTMDMNILQEVSM 280 Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG-PEKARQRI 251 +++ L+ + +D + ++ L+ + + + + +++ + + Sbjct: 281 EVVQLQSIAPQDAVQGMDALMGKLGLFKETNLKNNLAFIPLVNFRGVLVLAQTPELLKTA 340 Query: 252 TSLLKSLDVEESEEG-NTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 + +LD E G VYY++ A ++ ++L V E+ ++ S Sbjct: 341 RQWINALDTHGGEVGEQIYVYYVQNGLAKDIGDILLQVYGIAAPERRPEKQVVQSTTGRR 400 >UniRef50_Q1Q8Q7 Type II and III secretion system protein n=5 Tax=Moraxellaceae RepID=Q1Q8Q7_PSYCK Length = 792 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 94/432 (21%), Positives = 175/432 (40%), Gaps = 35/432 (8%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQR 250 Q + +++ +A + + + +L +K + + ++I+ P E A Q Sbjct: 364 QFTEMNIVASDSVAGNITLRLINVPWDQALDIILKSKNLGKRENGNVILVAPSTELAEQE 423 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDE-----KGNARKPSSS 305 L VE T L YAKA +++ +++ S K S+S Sbjct: 424 ARELEAQQAVESYAPLRTEYIRLSYAKAADVLTLISQGSGGASGGSNTGSANANTKDSNS 483 Query: 306 GAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNL 365 + +T DE+TN+L++ + E + +I ++DI QV++EA IV D + Sbjct: 484 LLSNRGTVTVDERTNTLIVKDVAASIENIHKLIGKIDIPVRQVMIEARIVSATDSFSKEI 543 Query: 366 GVQWANKNVGAQQFTN--------------------TGLPIFNAAQGVADYKKNGGITSA 405 GV+W + GA N T + + D + + Sbjct: 544 GVRWGILSNGAANNRNLLVGGSNQTLWDLKDFDVQTTTINGQTVSYPKYDITRPDNLNVD 603 Query: 406 NPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVP 465 + G + + L+A+ ++N+ ++++TP I+T D + A + G +P Sbjct: 604 LGVDNPAGRIAFGLLGISDFMLDLELSAMQADNRGEVISTPKILTSDKQTAKVSSGTQIP 663 Query: 466 VLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT 525 S + + T K L+ TP + + L++ + +N Sbjct: 664 YQEASASGA-----TTTSFKEAALSLEATPNITPDGKIGLQLLITNGTPTIINNQV---A 715 Query: 526 FNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNL 585 +I V+V+ G+T+VLGG+ + + V KVP LGD+P +G+ FR K L Sbjct: 716 IAEDSISTNVIVEDGQTIVLGGVFKNRTNNGVDKVPFLGDLPYIGRAFRKDVRSNTKEEL 775 Query: 586 MVFIRPTIIRDD 597 ++FI P +I D Sbjct: 776 LIFITPKLINDG 787 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 61/202 (30%), Gaps = 25/202 (12%) Query: 12 LAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFS 71 L F + +IR ++I+ Q I+ SV G I++R + Sbjct: 330 LLREPTLEEKVYTGAALSMEFQDVEIRSVLDILAQFTEMNIVASDSVAGNITLRLIN-VP 388 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP 131 + IL N L + + + L T + Sbjct: 389 WDQALDI---ILKSKNLGKRENGNVILVAPSTELAEQEARELEAQQAVESYAPLRTEYIR 445 Query: 132 LENVPARDLAPLLRQMMDA---------------------GSVGNVVHYEPSNVLILTGR 170 L A D+ L+ Q + G V E +N LI+ Sbjct: 446 LSYAKAADVLTLISQGSGGASGGSNTGSANANTKDSNSLLSNRGTVTVDERTNTLIVKDV 505 Query: 171 ASTINKLIEVIKRVDVIGTEKQ 192 A++I + ++I ++D+ + Sbjct: 506 AASIENIHKLIGKIDIPVRQVM 527 >UniRef50_B0UFJ1 General secretion pathway protein D n=4 Tax=Methylobacterium RepID=B0UFJ1_METS4 Length = 797 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 100/349 (28%), Positives = 162/349 (46%), Gaps = 12/349 (3%) Query: 287 GVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 + + G+ S + I ADE NSLVI+A ++ EK+ ++ RLD R Sbjct: 446 SALSGMGEAGGSGAVYGSGARRGGIGIVADETNNSLVISATRTQYEKILRILGRLDARPT 505 Query: 347 QVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSAN 406 QVL+E +I EV + L GVQW KN G A A +G + Sbjct: 506 QVLLETVIAEVTLNDKLEFGVQWFLKN--------GGSRFNLAQSDTAASVASGTSGAGA 557 Query: 407 PAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPV 466 G + D+ V+L AL + ++L++P+I LDN+ A +G VP+ Sbjct: 558 LVSAAMRGVPGFNYLLNDADFHVVLNALRGVTRVNVLSSPNITVLDNRTARLQIGDQVPI 617 Query: 467 LSGSQTTS---GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG 523 + S ++ + N +E K G L VTP+VN+ V+L+I QEVS V ++ S + Sbjct: 618 VKQSGQSALAGNAPILNQIELKDTGVILSVTPRVNKNGLVVLDINQEVSDVVPTTTSNIN 677 Query: 524 -PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 PT R + +V V G ++ +GG++ + ++ +P+LGD+P++G FR S R + Sbjct: 678 SPTIRQRRVATSVAVSDGHSLAIGGMVQEKAQIGTEALPVLGDLPVIGPAFRNKSDLRVR 737 Query: 583 RNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSED 631 L+VF+RP +IR ++ + + R R L Sbjct: 738 TELIVFLRPKVIRGTADADRIASDFRDQVRTMMPVRPVSAPPPLEEVPA 786 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 89/254 (35%), Gaps = 14/254 (5%) Query: 48 LGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVK 107 LG + +D V GT+++++ S+ F S L G ++ + + Sbjct: 94 LGWSYSLDERVAGTVTLQTAGPVSRAALLGLFESALAARGVTLRRRGSHVQILP----AG 149 Query: 108 TSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLIL 167 P P E +++PL + A ++ +L + + N+LI+ Sbjct: 150 APPPPSGVRGTPDAAGEPGAQVIPLRWISAGEMQSILAAVAPRD--LVLRADRTRNLLIV 207 Query: 168 TGRASTINKLIEVIKRVDVIGTEKQQI--IHLEYASAEDLAEILNQLISESHGKSQMPAL 225 +G + I L E I DV + + + A+ +A L ++ G A Sbjct: 208 SGDRAQIQALRETIAVFDVDWMRGLSVAMVPVRRANPSAIARDLAEVF----GGEASGAG 263 Query: 226 LSAKIVADKRTNSLIISGPEK-ARQRITSLLKSLD-VEESEEGNTRVYYLKYAKATNLVE 283 + + ++ ++++ R + L+ V E VY ++ A L Sbjct: 264 AMIRFLPNEALGAILVVSSRALYLDRAREWIARLEVVAADRERQLFVYRIQNRSAKELAA 323 Query: 284 VLTGVSEKLKDEKG 297 VL GV Sbjct: 324 VLQGVVSSDPTMAS 337 >UniRef50_Q0AF45 Type IV pilus secretin PilQ n=3 Tax=Nitrosomonas RepID=Q0AF45_NITEC Length = 720 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 93/423 (21%), Positives = 180/423 (42%), Gaps = 46/423 (10%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSL 254 L +++ + L + + + +L + +R ++I P E A + L Sbjct: 320 LNIIASDSVKGNLTLRLKDVPWDQALDIVLQTSDLDKRRVGNVIFIAPREEMAARERLQL 379 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAIT 314 ++ + E E T + L Y A+++ P ++ Sbjct: 380 EQNQQITELEVLQTEAFRLNYRTASSI--------------------PLKGILSQRGSVE 419 Query: 315 ADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNV 374 D+ +N+L +T + ++A +A LD + QV++E IVE D NLG ++ +N Sbjct: 420 VDDISNTLTVTDIPTRLAEVARHVANLDTQVRQVMIETRIVEATDTFSRNLGARFGVQNA 479 Query: 375 GAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDM----------------FSAYNGM 418 G + + + G S + ++ + + Sbjct: 480 TRIGSQTNGRRLGISGNLGNSSELAAGTISPSGGDNLNVNLPAAALAGVAGGPAALGLSL 539 Query: 419 AAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV 478 + L+AL S+++ I+A+P +VT + AS G ++P + S T Sbjct: 540 IKINNGTLINLELSALESDSQGRIIASPRLVTANRVEASIEQGTEIPFQTISVT------ 593 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVK 538 ++ K LKVTPQ+ D ++++++ + S+ + GP +T+ I VLV+ Sbjct: 594 RPQIQFKKAVLGLKVTPQITPDDNIIMKLQVNQDTRGESTPA--GPAIDTKQIVTEVLVE 651 Query: 539 TGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 G TVV+GG+ + K +++PLLGD+PL+G LF+ T+ KR L++F+ P I+ ++ Sbjct: 652 NGGTVVIGGIFEQVEKRDRNQIPLLGDVPLLGNLFKNTAKRDDKRELLIFVTPRILNENL 711 Query: 599 VYR 601 Sbjct: 712 SNN 714 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 67/208 (32%), Gaps = 9/208 (4%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 E+ NF + +IR ++++ I+ SV+G +++R + + Sbjct: 293 YTGEKLSLNFQDVEIRSILQVIADFTDLNIIASDSVKGNLTLRL-KDVPWDQALDI---V 348 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 L + N R + + + + L T L A + Sbjct: 349 LQTSDLDKRRVGNVIFIAPREEMAARERLQLEQNQQITELEVLQTEAFRLNYRTASSI-- 406 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASA 202 L+ ++ G+V + SN L +T + + ++ + +D + + A+ Sbjct: 407 PLKGILSQ--RGSVEVDDISNTLTVTDIPTRLAEVARHVANLDTQVRQVMIETRIVEAT- 463 Query: 203 EDLAEILNQLISESHGKSQMPALLSAKI 230 + + L + ++ Sbjct: 464 DTFSRNLGARFGVQNATRIGSQTNGRRL 491 >UniRef50_C1ZGU1 Type II secretory pathway, component PulD n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGU1_PLALI Length = 1445 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 146/716 (20%), Positives = 256/716 (35%), Gaps = 129/716 (18%) Query: 63 SVRSNDTFSQQEYYQFFLSILDLYGYSVI-TLDNGFLKVVRSANVKTSPGMIADSSRPGV 121 + ++ + + L ++ N + R ++ +IA R + Sbjct: 630 TAVASQVVTNITAFYATRVGLGARVLAIADPRSNSVIVRARPRDLDQVKALIAKVDRDEM 689 Query: 122 GDELVTRIVPLENVPARDLAPLL----RQMMDAGSV------------------------ 153 +I+PL+N A +L+ ++ + ++ S Sbjct: 690 AAVNQVKIIPLKNAVAVELSAVINAAIQSVLSPPSNQAANQGGANSGLGGNQVAEDFRQV 749 Query: 154 ----------------------GNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE- 190 + N LIL+ +I L E+I+++D Sbjct: 750 RPAILSFLAGDKKALRSGMLADIRITPDTRMNSLILSAPEQSIPLLEELIRQLDQPTAAV 809 Query: 191 -KQQIIHLEYASAEDLAEILNQLISE--------------------SHGKSQMPALLSAK 229 + ++ L A A L L QL S + L+ + Sbjct: 810 AEIKVFTLTNADASQLVTQLQQLFSPGGNQQGGGNNALRQQLGLAVAGADDASSNLIPLR 869 Query: 230 IVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 D RTNS+ G +A + + ++L LD + E V+ LK + A + +T Sbjct: 870 FSVDTRTNSITAIGGAEALRVVEAILLRLDESDLRERKNVVFKLKNSPALAVSTAVTQFV 929 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQT--NSLVITADQSVQEKLATVIARLDIRRAQ 347 S+ + +T NSL+I+A +++ ++ LD Q Sbjct: 930 NSQLQLSQQNPNLISTVEQLEREVVVVPETGTNSLLISATPRYYDEITRLVMELDQAPRQ 989 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANK---------------------NVGAQQFTNTGLPI 386 V+++A+IVEV N GV+ + + Q T + Sbjct: 990 VIIQALIVEVTLDNVDEFGVELGLQDSVLFDRSVVDDLVTLTETTTSPNGTQTTTQRVVS 1049 Query: 387 FNAAQGVADYKKN---GGITSANPAWDMFSAYNGMAAGFFNGDWG--------------V 429 AA G N G T+ NP+ + + G N D G V Sbjct: 1050 QTAAPGFLFNNPNTPLGNNTTINPSSVGSQGLSSFSLGRVNNDLGYGGLVLSAGSESVNV 1109 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGT 489 L+ ALAS + +L+ P I TLDN+ A VGQ VP++ G Q + + + G Sbjct: 1110 LIRALASRRRLQVLSRPQIRTLDNQQAQIQVGQQVPIVDGVQIGATGLANPQIRQDQAGI 1169 Query: 490 KLKVTPQVNEGDAVLLEIEQEVSSV----------DSSSNSTLGPTFNTRTIQNAVLVKT 539 L VTP+++ +++E+ E S ++ N P + + A+ V Sbjct: 1170 ILTVTPRISPDGTIVMELIAEKSQFRGNGVPIFTDATNGNVIESPIKDISAARTAISVPN 1229 Query: 540 GETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDV 599 G+TVV+GG++ + KVP +GDIP+VG LFRY S + L++F+ P +I D Sbjct: 1230 GQTVVMGGMITATDETSERKVPFIGDIPIVGHLFRYDSKSHVRTELLIFLTPRVISSDAD 1289 Query: 600 YRSLSKEKYTRYR------QEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAPSS 649 + + R +E + + ++G D + S P P S Sbjct: 1290 SEFIKDVEMGRLHFIECEAEEIHGPLRAINAPVMGDPDWTNQLSPSVPSVDPMPPS 1345 Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 55/395 (13%), Positives = 122/395 (30%), Gaps = 54/395 (13%) Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 I + A+V+ +I + ++ L + + ++ LL Sbjct: 505 NIEAIGDLGVLILRGNEADVEQVMKVIRELEALSENTAPQLHVLYLSHTDSPAMSELLTL 564 Query: 147 MMD-----------AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG--TEKQQ 193 + D ++ + N LI+ + ++ ++E+ + +D + + Sbjct: 565 VFDSLAKFPGRATQPRQNVAIIPVDTPNALIIVAPKTDLDSILELAEELDQPTDPESEFE 624 Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITS 253 + L+ A A + + + G +AD R+NS+I+ + ++ + Sbjct: 625 VFSLKTAVASQVVTNITAFYATRVGLGA-----RVLAIADPRSNSVIVRARPRDLDQVKA 679 Query: 254 LLKSLDVEESEEGN-TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD--- 309 L+ +D +E N ++ LK A A L V+ + + N Sbjct: 680 LIAKVDRDEMAAVNQVKIIPLKNAVAVELSAVINAAIQSVLSPPSNQAANQGGANSGLGG 739 Query: 310 -------------------------------NVAITADEQTNSLVITADQSVQEKLATVI 338 ++ IT D + NSL+++A + L +I Sbjct: 740 NQVAEDFRQVRPAILSFLAGDKKALRSGMLADIRITPDTRMNSLILSAPEQSIPLLEELI 799 Query: 339 ARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKK 398 +LD A V E + + + + L Q G G+A Sbjct: 800 RQLDQPTAAVA-EIKVFTLTNADASQLVTQLQQLFSPGGNQQGGGNNALRQQLGLAVAGA 858 Query: 399 NGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTA 433 + ++ P + ++ A Sbjct: 859 DDASSNLIPLRFSVDTRTNSITAIGGAEALRVVEA 893 >UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD Length = 901 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 92/426 (21%), Positives = 164/426 (38%), Gaps = 39/426 (9%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT 252 +I A+D++ + + + +L K + + ++I P K + Sbjct: 500 EISKKNIVVADDVSGKVTIRLRNVPWDQALDLVLRTKALGKEEFGNIIRIAPLKTLEEEA 559 Query: 253 SL--LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 L + +++ E+ + + YA A ++ + V + Sbjct: 560 RLRQERKKSLQQQEDLMVNLLPVNYAVAADMAARVKDVL------------------SER 601 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 ++T D++TN L++ +S E+ +++ LD + QVL+E+ IVE +LGVQW Sbjct: 602 GSVTVDQRTNVLIVKDVRSNTERARSLVRSLDTQTPQVLIESRIVEANTSFSRSLGVQWG 661 Query: 371 NKNVGAQQFTNTGLPIFNAA----------QGVADYKKNGGITSANPAWDMFSAYNGMAA 420 + Q N+ IF N + G Sbjct: 662 GQARAGQATGNSTGLIFPNNLAVTGGVTGTGAGLPDNPNFAVNLPTGTGQGVGGAMGFTF 721 Query: 421 GFFNG--DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNV 478 G G + L+A + ++ P + TLDN A N G +P S Sbjct: 722 GSAGGALQLNLRLSAAENEGSVKTISAPKVTTLDNNTARINQGVSIPFSQTSAQGVNTT- 780 Query: 479 FNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS-TLGPTFNTRTIQNAVLV 537 L+VTP + + +VL+ I + D SS P+ + VLV Sbjct: 781 -----FVEARLSLEVTPHITQDGSVLMSINASNNQPDPSSTGANGQPSIQRKEANTQVLV 835 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 K G+T V+GG+ QV+ VP L IP++G LF+ S ++ L++FI P I+ Sbjct: 836 KDGDTTVIGGIYVRRGATQVNSVPFLSRIPVLGLLFKNNSETDTRQELLIFITPRILNRQ 895 Query: 598 DVYRSL 603 + ++L Sbjct: 896 TIAQTL 901 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 64/179 (35%), Gaps = 6/179 (3%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 AA P ++ F + DI+ + ++ + K I++ V G +++R Sbjct: 467 AAEGAPQQARYRGKRVSFEFKDIDIQNLLRVIAEISKKNIVVADDVSGKVTIRL-RNVPW 525 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 + +L N + + ++L+ ++P+ Sbjct: 526 DQALDL---VLRTKALGKEEFGNIIRIAPLKTLEEEARLRQERKKSLQQQEDLMVNLLPV 582 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 A D+A ++ ++ G+V + +NVLI+ S + +++ +D + Sbjct: 583 NYAVAADMAARVKDVLS--ERGSVTVDQRTNVLIVKDVRSNTERARSLVRSLDTQTPQV 639 >UniRef50_D2L502 Type II and III secretion system protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L502_9DELT Length = 542 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 102/484 (21%), Positives = 209/484 (43%), Gaps = 28/484 (5%) Query: 127 TRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDV 186 ++ V + LL ++D V N + + I Sbjct: 73 VTVIASSPVTREEAKRLLFSILDVKGFSVVEMD---NAYKVIKKKDAIASAGIKGGGGHG 129 Query: 187 IGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEK 246 ++ + ++ A+++ E L +++S A I A N +++ E Sbjct: 130 SDQVFTEVFYFKHIPAKNVVEDLRKVLSPE-----------ASIFAGTDGNYVVVGDKET 178 Query: 247 ARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSG 306 ++ ++ +D + T Y+L+Y A +VL + +K + + Sbjct: 179 NIIKLRGIIAKIDSPSFAQ-VTISYHLQYLMAAATAKVLGDIFKKDGKDGSAS------- 230 Query: 307 AMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLG 366 + I + +N++V+TA + Q ++A ++A +D R QV + A++VEV +G Sbjct: 231 ----LQILPLKGSNTVVVTALPAAQSQVANILANMDKRTPQVSISAMLVEVILDESSKMG 286 Query: 367 VQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGD 426 + W + + + N A + + +A F G Sbjct: 287 LDWKLRAWSSNKAYNEFAQDTLAKTLETGSQSASANLAKYSDAGTKAAMFFNI--FPGGY 344 Query: 427 WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKT 486 +L+ ++S+ IL++P ++ DN+ AS ++G+++P+L +T + ++ T ++T Sbjct: 345 LSMLVHMISSDTNAKILSSPHLLVADNQEASISLGREIPILKEYRTDTNNDPIKTYSQRT 404 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLG 546 G +LK+TP + + V L++ Q++S++D + + RT V+V +T+V+G Sbjct: 405 FGLELKMTPTIADNGDVTLKVSQKLSNLDEQDTTNDTYKASERTADTTVVVHDKQTLVIG 464 Query: 547 GLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKE 606 GL +++ S P IP++G LF ST + KR L++FI PT++RD ++S E Sbjct: 465 GLTMQTDEKEDSGTPTARKIPVLGYLFGTKSTSKQKRELLLFITPTVVRDPIQADAMSVE 524 Query: 607 KYTR 610 Sbjct: 525 YKEE 528 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 127/261 (48%), Gaps = 13/261 (4%) Query: 8 TCCLLAALLMPCAGHA---ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISV 64 +L + ++ CA + E+ NF + D+ ++ + LGKT + + G ++V Sbjct: 16 LVLMLISPILVCAAKGNSDQGERIELNFRDTDVLAVLQFYAELLGKTFIPAEDLTGKVTV 75 Query: 65 RSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDE 124 ++ +++E + SILD+ G+SV+ +DN KV++ + S G+ D+ Sbjct: 76 IASSPVTREEAKRLLFSILDVKGFSVVEMDNA-YKVIKKKDAIASAGIKGGGGH--GSDQ 132 Query: 125 LVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 + T + +++PA+++ LR+++ + ++ N +++ + + I KL +I ++ Sbjct: 133 VFTEVFYFKHIPAKNVVEDLRKVLSPEA--SIFAGTDGNYVVVGDKETNIIKLRGIIAKI 190 Query: 185 DVIGTEKQQI-IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 D + I HL+Y A A++L + K S +I+ K +N+++++ Sbjct: 191 DSPSFAQVTISYHLQYLMAAATAKVLGDIFK----KDGKDGSASLQILPLKGSNTVVVTA 246 Query: 244 PEKARQRITSLLKSLDVEESE 264 A+ ++ ++L ++D + Sbjct: 247 LPAAQSQVANILANMDKRTPQ 267 >UniRef50_A9H699 General secretion pathway protein D n=3 Tax=cellular organisms RepID=A9H699_GLUDA Length = 772 Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats. Identities = 121/582 (20%), Positives = 235/582 (40%), Gaps = 28/582 (4%) Query: 62 ISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSAN-VKTSPGMIADSSRPG 120 + +R D + + Q FL G V +D+ +V + + + + Sbjct: 196 VPLRYADAANLAKALQPFLQG----GARVTPVDSANAVIVSGEPSARNTLVDVIHAFDVD 251 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRA----STINK 176 ++P+E+ ARD+A L+ + G++ V+ N +++ R+ + Sbjct: 252 WLSSQSYALLPVESGNARDMATALQSALHGGNLVQVLPLARVNAVLVVARSARQIDDARR 311 Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 L +I+R + +++ +S D+ L Q + + P S ++ Sbjct: 312 LFALIERNRRATMRSWHVFYVQNSSVNDVTYTLQQAFTPGDVTATPPETTSGTASQLGQS 371 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNTRV-YYLKYAKATNLVEVLTGVSEKLKDE 295 + + + G+ + +A + Sbjct: 372 GFTGTMANAMGGGGLGGSAGTGNTTGLMGGSQQGGVQATAGQAPTGQAGGGPAAFANPLL 431 Query: 296 KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 G S+ G + I ++ Q N++++ + + ++ R+D+ QV ++A+I Sbjct: 432 GGLDNTASAEGRPQAMRIISNSQHNAILVYGTDQESDTVEQMLRRIDVMPLQVRIDAVIA 491 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 EVQ + L G Q+ K+ G +T + A + Sbjct: 492 EVQLNDALQYGTQFFFKSGGINGVLSTNSQTITTG-------------TLATAAFSHTLP 538 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS- 474 + G G + AL + +L++P ++ DN+ A VGQ VPV GSQ+++ Sbjct: 539 GFIIGGASGGGAPFAIDALQNVTTVHVLSSPQLMVQDNRAARLQVGQLVPVQIGSQSSTI 598 Query: 475 GDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG----PTFNTRT 530 G +++N + G ++VTP V+EG V L++ QEVSSV ++ ST PTFN R+ Sbjct: 599 GTSIYNQFTYQPTGVIMQVTPHVSEGGLVTLDVSQEVSSVSPTAASTANAASNPTFNDRS 658 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 + + V+V+ G+TV L GL+ D S S +P L +IP++G L + R + L++ + Sbjct: 659 VSSRVVVQDGQTVGLAGLITDSSSRINSGIPWLKNIPVLGVLAGNQNNNRQRTELLILMT 718 Query: 591 PTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDL 632 P +I D L ++ + + + + GS D Sbjct: 719 PHVIHDQRDAVDLMEDLRDTHPNAANVPDELRVMRMTGSADP 760 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 108/291 (37%), Gaps = 14/291 (4%) Query: 25 NEQYGANFNNADIRQ-FVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 NF + D+R +I+ L IDP+V G +++ ++ + + IL Sbjct: 92 GGDIALNFADTDVRDAVSQIMTDILHVNYAIDPAVHGRVTLHTSQPLTAGQLLPALQIIL 151 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 +I D + V A+ A + V +VPL A +LA Sbjct: 152 AQVHAVLIQADGLYRIVPAQADSANPQSSAAGIAENASLGGSV--MVPLRYADAANLAKA 209 Query: 144 LRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG--TEKQQIIHLEYAS 201 L+ + G+ V + +N +I++G S N L++VI DV ++ ++ +E + Sbjct: 210 LQPFLQGGAR--VTPVDSANAVIVSGEPSARNTLVDVIHAFDVDWLSSQSYALLPVESGN 267 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 A D+A L + + +P ++ R+ I +R+ +L++ Sbjct: 268 ARDMATALQSALHGGNLVQVLPLARVNAVLVVARSARQI-----DDARRLFALIERNRRA 322 Query: 262 ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 + V+Y++ + ++ L S + + + Sbjct: 323 TM--RSWHVFYVQNSSVNDVTYTLQQAFTPGDVTATPPETTSGTASQLGQS 371 >UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SM90_THIDA Length = 745 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 108/522 (20%), Positives = 194/522 (37%), Gaps = 55/522 (10%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 P++ + L R ++ Y+ N I+ +AS + +V G + Sbjct: 228 PVKVIETYSLGDNTRMVIQPQGGWEYSAYQTDNSFIVEVKASDDAQKKTADGKVKYSGEK 287 Query: 191 KQQIIH----------------LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADK 234 L +++ + L + + + ++ K + + Sbjct: 288 LSLNFQNVEVRSVLQVIADFTGLNIVASDTVTGNLTLRLKDVPWDQALDLIMQTKGLDKR 347 Query: 235 RTNSLIISGPEKAR--QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 + ++I P + V + E T L Y +A +L G + Sbjct: 348 QNGNVIWIAPRDELLAKEKLEFEAKKQVADLEPLVTDYIQLNYLRADEAQTMLYGFASGA 407 Query: 293 -------------------------KDEKGNARKPSSSGAMDNVAITADEQTNSLVITAD 327 + + T + +TN+L+IT Sbjct: 408 FLNSAGNNAVNCSTQAQGLGGAAVAQAMQKGEGDTDQKVLTKRGRATYELKTNTLIITDT 467 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIF 387 S ++ ++ARLD+ QV++EA +V LGV+ + A N G+ Sbjct: 468 ASKIAEVRGLLARLDVPARQVMIEARVVIADSLWSRELGVRLGTRLFKATGRDNIGVGGT 527 Query: 388 NAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWG----VLLTALASNNKNDIL 443 +T + +A +A N G + L+AL ++N+ IL Sbjct: 528 LNESASIAAGGTPTVTPQVELGTVGAAAGQIAMSLLNASNGNLLSLELSALEADNRGKIL 587 Query: 444 ATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAV 503 + P ++T + K A G +P ++ N TV K L V PQ+ DA+ Sbjct: 588 SNPRVMTSNQKPAVILNGTQIPFITP----GTANSPATVTFKDAFLCLLVDPQILNNDAL 643 Query: 504 LLEIEQEVSSVDSSSNSTLG----PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSK 559 ++ IE + ++D+++ + P TR I+ V V GET+VLGG+ D V K Sbjct: 644 IMTIEVQKDAIDTANAAVGADIIAPAIATRRIKTQVRVNNGETLVLGGIFDQTEFNNVDK 703 Query: 560 VPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 VP LGD+P +G LF+ T+ + K ++VFI P I+ + R Sbjct: 704 VPFLGDVPGLGNLFKRTNKQDQKTEMIVFITPRILDERLSLR 745 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 84/293 (28%), Gaps = 48/293 (16%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 E+ NF N ++R ++++ G I+ +V G +++R + Sbjct: 279 GKVKYSGEKLSLNFQNVEVRSVLQVIADFTGLNIVASDTVTGNLTLRL-KDVPWDQALDL 337 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPAR 138 I+ G N R + + + LVT + L + A Sbjct: 338 ---IMQTKGLDKRQNGNVIWIAPRDELLAKEKLEFEAKKQVADLEPLVTDYIQLNYLRAD 394 Query: 139 DLAPLLRQMMDAG-----------------------------------------SVGNVV 157 + +L G Sbjct: 395 EAQTMLYGFASGAFLNSAGNNAVNCSTQAQGLGGAAVAQAMQKGEGDTDQKVLTKRGRAT 454 Query: 158 HYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ---QIIHLEYASAEDLAEILNQLIS 214 + +N LI+T AS I ++ ++ R+DV + +++ + + +L L + Sbjct: 455 YELKTNTLIITDTASKIAEVRGLLARLDVPARQVMIEARVVIADSLWSRELGVRLGTRLF 514 Query: 215 ESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGN 267 ++ G+ + + A P+ + + + + N Sbjct: 515 KATGRDNIGVGGTLNESASIAAGGTPTVTPQVELGTVGAAAGQIAMSLLNASN 567 >UniRef50_B1J2J3 Type IV pilus secretin PilQ n=5 Tax=Pseudomonas RepID=B1J2J3_PSEPW Length = 422 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 79/407 (19%), Positives = 159/407 (39%), Gaps = 40/407 (9%) Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 + +++ + + + + + +L +K + + ++++ P +L Sbjct: 50 INLVASDTVQGSITLRLQDVPWDQALELVLRSKGLGRREEGNVLLVAPAVELAE-QALGA 108 Query: 257 SLDVE---ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAI 313 + +E +S + + +A+A E A ++ Sbjct: 109 RMGLELEAQSRPLRRELLPIHHAEA------------SELAELLLATLADDGILTGRGSL 156 Query: 314 TADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN 373 + D +TN+LV + +L ++A+LD+ QV +EA IVE +LGV+W Sbjct: 157 SVDVRTNTLVAHQPEDRLAELRQLVAQLDVPVRQVEIEARIVEANVDYENSLGVRWG--- 213 Query: 374 VGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTA 433 + ++ G + + + G + L+A Sbjct: 214 ----------------PRLYSEAPALGKDVFVDLGMERAGSSIGFGVLRGGVLLDLELSA 257 Query: 434 LASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKV 493 + +I++ P +VT +N+ A G +VP +++ + +V + L+V Sbjct: 258 MEKTGNGEIISQPKVVTANNETARILKGTEVPYQETTKSGA-----TSVTFREASLSLEV 312 Query: 494 TPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFS 553 TPQ+ V++ ++ D + P + V V GET+V+GG+ Sbjct: 313 TPQITPDGKVIMTVKVTKDEPDFVNALNDVPPIRKNEVNAKVRVADGETIVIGGVYSTTQ 372 Query: 554 KEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 V KVP GD+P VG+LFR + + K L+VF+ P I+ D + Sbjct: 373 NNVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIMNDQAIA 419 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 118/332 (35%), Gaps = 14/332 (4%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 M GL K L + + A E NF + ++R ++++ + G ++ +VQG Sbjct: 1 MNGLMKWLVAALLPMPLLAATPYRGEPISLNFQDVEVRLVLQVLADYAGINLVASDTVQG 60 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 +I++R D + + +L G N L + + G Sbjct: 61 SITLRLQD-VPWDQALEL---VLRSKGLGRREEGNVLLVAPAVELAEQALGARMGLELEA 116 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAG----SVGNVVHYEPSNVLILTGRASTINK 176 L ++P+ + A +LA LL + G++ +N L+ + + Sbjct: 117 QSRPLRRELLPIHHAEASELAELLLATLADDGILTGRGSLSVDVRTNTLVAHQPEDRLAE 176 Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 L +++ ++DV + + + A+ + + + + ++ + +R Sbjct: 177 LRQLVAQLDVPVRQVEIEARIVEANVDYENSLGVRWGPRLYSEAPALGKDVFVDLGMERA 236 Query: 237 NSLIISGPEKARQRITSLLKSLDVEESEEGNT--RVYYLKYAKATNLVEVLTGVSEKLKD 294 S I G + + L +++ + E + +V A L E K Sbjct: 237 GSSIGFGVLRGGVLLDLELSAMEKTGNGEIISQPKVVTANNETARILKGTEVPYQETTKS 296 Query: 295 EKGNARKPSSSGAMD-NVAITADEQTNSLVIT 325 + +S +++ IT D +++T Sbjct: 297 GATSVTFREASLSLEVTPQITPD---GKVIMT 325 >UniRef50_A1U3Z5 Type II and III secretion system protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U3Z5_MARAV Length = 733 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 121/640 (18%), Positives = 231/640 (36%), Gaps = 70/640 (10%) Query: 24 ENEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQGT---ISVRSNDTFSQQEYYQFF 79 + N+ + F+ E+ G+ LG + + PS+ +++R + ++ Sbjct: 109 TGDPISLELNDLPLPVFINEVFGEKLGLSFSLAPSLADKTDLVTLRLSTPLEPSALFRTA 168 Query: 80 LSILDLYGYSVITLDNGFLKVVRSANVKTSPGMI----ADSSRPGVGDELVTRIVPLENV 135 S+L YG ++ G + NV T + V +++PL+ Sbjct: 169 RSVLADYGVAM-EQKEGLWVFSPAENVSTQGVPLLVSGEALPDVPASHRPVFQVIPLQVT 227 Query: 136 PARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQII 195 + ++ + GS + N +IL G T+ + + + D + + + Sbjct: 228 SNNQVRGVVSSLF-KGSKLEIQEDALRNAIILKGDRQTVEEAAQAVAFFDRPLLQGRNSL 286 Query: 196 HLE--YASAEDLAEILNQLISESHGKSQMPA--LLSAKIVADKRTNSLIISG-PEKARQR 250 L + LA L ++S P +S I+ S+++ G + Sbjct: 287 VLRPVFRDVSSLASALQDILSAEGFAVGRPGGTGVSMNILPLPELGSIVVLGRSREILSH 346 Query: 251 ITSLLKSLDV--EESEEGNTRVYYLKYAKATNLVEVLTGVSEK----------------- 291 + LD + E Y ++ A L +L+ + Sbjct: 347 ARQWAEKLDQDFQREIESGMFTYEVQNTSAEELASLLSQLYGGNELAGSRSARSGESNTG 406 Query: 292 --------LKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDI 343 + S S + + D+ N L+ + KL + LD Sbjct: 407 TSNASDQETSTTRRAGSTVSVSTEVAGGRLVVDKNRNVLIFRGSGADWLKLREIAVELDK 466 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT 403 + VL+E ++ EV + +GV+W +N T Sbjct: 467 QVPSVLMEVVLAEVTLNDNQGMGVEWLARNSVGDLSG----------------------T 504 Query: 404 SANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 G +L A +N+ I ++P I+ + A+ VG + Sbjct: 505 LETLGGLGIGGRGFSYTLNSAGQTRAVLNAFYDSNQAVIRSSPKIMVKSGETATIEVGNE 564 Query: 464 VPVLSG-----SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSS-VDSS 517 +PVL+ +QT +V + + G L V P V V + I Q +S D+S Sbjct: 565 IPVLTSTRQSDTQTDGDTDVLQQFQYRKTGVDLTVEPIVQASGLVDIRIRQSLSETQDTS 624 Query: 518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTS 577 + PT R ++ ++ ++ G +VVLGGL+ + + VP LG +PL+G LFR S Sbjct: 625 GGDSFLPTILNRAVETSLTLRDGGSVVLGGLISKTNSQGEQGVPWLGKLPLLGPLFRTDS 684 Query: 578 TERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQ 617 + LMV + P ++R+D+ R++S+ R + + Sbjct: 685 DSTSTTELMVMVVPYVVRNDEEARNVSELLRERIQNSSAE 724 >UniRef50_A8ZSX5 Type IV pilus secretin PilQ n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSX5_DESOH Length = 987 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 97/491 (19%), Positives = 172/491 (35%), Gaps = 44/491 (8%) Query: 106 VKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVL 165 + + + T + PA L + + + NV+ Sbjct: 538 AAPEAAVPQTAPAFEAPTGMRTE----PDAPAPSLFGKKKNFTGEPIALDFYKTDIRNVI 593 Query: 166 ILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPAL 225 + S N I + + + DL +N L + Sbjct: 594 RILKDVSGKNFA---IDDDVSGSVTLSFVNPVPWDQVLDLILEMNNL-GMVEADGIIRIA 649 Query: 226 LSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKA-TNLVEV 284 A +V K + ++ + E T + + YA A +++ Sbjct: 650 TQATLVQQKESEKAALTAQQDM---------KKAEETLASLVTEYFSISYANAGEDILPH 700 Query: 285 LTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIR 344 + G+ D D +TN +++T + EK +IA++D Sbjct: 701 IEGLL------------------SDRGHAKVDNRTNQVIMTDVEEKVEKAREIIAKIDKV 742 Query: 345 RAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITS 404 QV+++A IVE G +W N N G + Y + + S Sbjct: 743 TPQVMIKARIVETSSSFSREFGTEWGIDNRYNSPNINIGTDGAYRDEMGGTYTYDVALNS 802 Query: 405 ANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDV 464 + N L+ + S I++TP +VTLDNK A+ + G D Sbjct: 803 LSSPVQNLIGINFARIIGTPFSLDAKLSLMESTGDVKIISTPKVVTLDNKTATISQGIDY 862 Query: 465 PVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGP 524 P + V+ KT+ L VTP V D + +++ + + V N Sbjct: 863 PYTVVEDGEAD------VKWKTIDLNLDVTPHVTPDDRISMKLNIQKNDVGEIINGEQ-- 914 Query: 525 TFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRN 584 +FNT+ +LV G+TVV+GG++ + VP + IP++G LF+Y + K Sbjct: 915 SFNTKRASTELLVNDGDTVVIGGIIKEREGAGERGVPWISKIPVLGNLFKYKTRSDEKSE 974 Query: 585 LMVFIRPTIIR 595 L++FI P ++R Sbjct: 975 LLIFITPNVVR 985 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 13/188 (6%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 A L + E +F DIR + I+ GK ID V G++++ + Sbjct: 565 APSLFGKKKNFTGEPIALDFYKTDIRNVIRILKDVSGKNFAIDDDVSGSVTLSFVNPVPW 624 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIAD-------SSRPGVGDEL 125 + IL++ ++ D ++ V+ A L Sbjct: 625 DQVLDL---ILEMNNLGMVEADGIIRIATQATLVQQKESEKAALTAQQDMKKAEETLASL 681 Query: 126 VTRIVPLENVPA-RDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 VT + A D+ P + ++ G+ +N +I+T + K E+I ++ Sbjct: 682 VTEYFSISYANAGEDILPHIEGLLS--DRGHAKVDNRTNQVIMTDVEEKVEKAREIIAKI 739 Query: 185 DVIGTEKQ 192 D + + Sbjct: 740 DKVTPQVM 747 >UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxobacter RepID=A7H857_ANADF Length = 893 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 89/415 (21%), Positives = 160/415 (38%), Gaps = 40/415 (9%) Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG--PEKARQRITSLLKSLD 259 A+D+ + + + +L +K + + ++I A+++ Sbjct: 498 ADDVTGKVTVALRNVPWDQALDLVLKSKGLGKEEMGNVIRIARFEAIAKEQQARAEAEKA 557 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 R+ + +A+A ++ + V + +++ DE+T Sbjct: 558 RIPLMPLKVRIIPVNFARAGDVSGRVKDVL------------------SERGSVSTDERT 599 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 N L++ Q + ++ LD QVL+E+ IVE LGVQW Q Sbjct: 600 NVLIVKDVQEALVRAEGLVRNLDTEIPQVLIESRIVEASSNFNKALGVQWGGNASFTQAT 659 Query: 380 TNTGLPIFNAA-----------QGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNG--D 426 N F N ++ P D G+ G G + Sbjct: 660 GNPTGVAFPNNVAAAGGAGPGNSFGTAANPNYAVSLPAPVGDGQGGALGLVFGSAGGAFN 719 Query: 427 WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKT 486 + L+AL +N ++ P I T+DN+ A+ G +P S + Sbjct: 720 LNLRLSALENNGVVKTISAPKIATIDNREATIGQGISIPFSQVSASGVNTT------FIE 773 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSS-SNSTLGPTFNTRTIQNAVLVKTGETVVL 545 +LKVTP V+ ++LL+I+ + + + + P+ + R + VLVK GET V+ Sbjct: 774 AKLELKVTPHVSADGSILLKIKATNNQPNPQLTGANGQPSISKREAETEVLVKDGETTVI 833 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 GG+ + + S+VP LG +PL+G FR S + L++FI P I+ Sbjct: 834 GGIYTRQTANRTSEVPFLGKLPLLGYFFRNMSEQDDHTELLIFITPRILNRAATA 888 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 63/179 (35%), Gaps = 6/179 (3%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 A P A + +F++ DIR + ++ K I++ V G ++V Sbjct: 456 ALSGAPQARGYSGRRITLDFHDIDIRNLLRLIADVSKKNIVVADDVTGKVTVAL-RNVPW 514 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 + +L G + N A K L RI+P+ Sbjct: 515 DQALDL---VLKSKGLGKEEMGNVIRIARFEAIAKEQQARAEAEKARIPLMPLKVRIIPV 571 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 A D++ ++ ++ G+V E +NVLI+ + + +++ +D + Sbjct: 572 NFARAGDVSGRVKDVLS--ERGSVSTDERTNVLIVKDVQEALVRAEGLVRNLDTEIPQV 628 >UniRef50_A6GPK2 Pili assembly protein PilQ n=1 Tax=Limnobacter sp. MED105 RepID=A6GPK2_9BURK Length = 681 Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats. Identities = 104/577 (18%), Positives = 212/577 (36%), Gaps = 60/577 (10%) Query: 42 EIVGQHLGKTILID----------PSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVI 91 + V Q +GK ++I + G +R L + Sbjct: 144 DTVAQAMGKPVVIAEGPVMQAWKLDRIAGKWLLRMEFDRPNIVADAVLL-----NNQLKV 198 Query: 92 TLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAG 151 N L + ++ GD +T + L A L +++ Sbjct: 199 RFANVRLAPGVALQLQIPGDSPIAQLELKPGDLALTVQMQLN--GATHLVRQRGPVVEVE 256 Query: 152 SVGNVVHYEPSNVL---ILTGRASTINKLIEVIKRVDVIGTEKQQIIHL-------EYAS 201 P+ + +T S + + +D + + ++ + Sbjct: 257 LSPAQNKAAPTKAIELKAVTSAQSVVARYTGRPITLDFKDADIRTVMQVFADFTKMNLVL 316 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIV-ADKRTNSLIISGPEKARQRITSLLKSLDV 260 ++ + + + + + ++ +K + + + N L++S P Sbjct: 317 SDSVQGKVTVFLKDVPWDQALDIVMRSKGLVSSQAGNVLLVSTPTDVTNDQFQTANRRAQ 376 Query: 261 EESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTN 320 +E E ++V+ + Y K +LV ++ S + +DE+T+ Sbjct: 377 DEMEPLVSKVFQVSYQKTADLVALIKSE--------------DSKLLSARGTLISDERTS 422 Query: 321 SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFT 380 + + + E+++ ++ LD QV++EA +V +LG++ + A Sbjct: 423 QIFVQDTPTRLERISMIVNGLDKPVKQVMIEARVVLADTSVSRDLGIRLRALSARADP-- 480 Query: 381 NTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKN 440 G G ++ G + N + +F+A + + L AL NK Sbjct: 481 --GFDEVGDQFGSGNFVNTGVENATNLGYTLFNANS-------TRLINLQLRALELENKV 531 Query: 441 DILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEG 500 ++ P ++T + + A G ++P + + + E K KL VTPQ+ Sbjct: 532 RTVSNPRVITSNKEPALIEQGTEIPYQIATSSGATAT-----EFKEANLKLAVTPQIAPD 586 Query: 501 DAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV 560 VLL+++ S+ ++ GP +TR ++ VLV G TVVLGG+ ++ K Sbjct: 587 GTVLLDVDVAKDSIG--IETSNGPAIDTRRVKTKVLVSDGGTVVLGGIFEEDDNVLNDKT 644 Query: 561 PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 P LGDIP +G LFR + R + L++F+ P ++ Sbjct: 645 PFLGDIPGLGVLFRGKNESRRRAELLIFLTPVVLTSQ 681 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 98/319 (30%), Gaps = 22/319 (6%) Query: 12 LAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFS 71 +F +ADIR +++ +++ SVQG ++V Sbjct: 274 AVTSAQSVVARYTGRPITLDFKDADIRTVMQVFADFTKMNLVLSDSVQGKVTVFL-KDVP 332 Query: 72 QQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVP 131 + ++ G N L V +V A+ + LV+++ Sbjct: 333 WDQALDI---VMRSKGLVSSQAGN-VLLVSTPTDVTNDQFQTANRRAQDEMEPLVSKVFQ 388 Query: 132 LENVPARDLAPLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGT 189 + DL L++ + G ++ E ++ + + + + ++ ++ +D Sbjct: 389 VSYQKTADLVALIKSEDSKLLSARGTLISDERTSQIFVQDTPTRLERISMIVNGLDKPVK 448 Query: 190 EKQ---QIIHLEYASAEDLAEILNQL-------ISESHGKSQMPALLSAKIVADKRTNSL 239 + +++ + + + DL L L E + ++ + Sbjct: 449 QVMIEARVVLADTSVSRDLGIRLRALSARADPGFDEVGDQFGSGNFVNTGVENATNLGYT 508 Query: 240 IISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA 299 + + + L+ + N RV A ++ +E ++ Sbjct: 509 LFNANSTRLINLQLRALELENKVRTVSNPRVITSNKEPA-----LIEQGTEIPYQIATSS 563 Query: 300 RKPSSSGAMDNVAITADEQ 318 ++ N+ + Q Sbjct: 564 GATATEFKEANLKLAVTPQ 582 >UniRef50_A0P0N8 General secretion proteinD n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0N8_9RHOB Length = 789 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 122/687 (17%), Positives = 242/687 (35%), Gaps = 116/687 (16%) Query: 25 NEQYGANFNNADIRQFV-EIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 NE F+N + V +++G L + G +S ++ + IL Sbjct: 120 NEAVTIAFDNEPLGYVVKQLLGGMLSANYVTSEEFTGVVSFKTETPVPRSSIPSILRDIL 179 Query: 84 DLYGYSVITLDNGFLKVVR-------------------------------SANVKTSPGM 112 YGY + + NG + + + Sbjct: 180 AHYGYVMKII-NGVYHIGPVSKIVELERNAAAGAIGDFKTRVLKLKNGNVEEIAQAVAQI 238 Query: 113 IADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGS-------------------- 152 + + T ++ + + + L++ ++ Sbjct: 239 LPAGATITPVLSNNTLVLRVNPSDEKAVVDLIQAIIGNSGENEFIAVIPLRESPPEVVAN 298 Query: 153 ----------------VGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ--QI 194 + E ++L++ ++ + +++ +D +I Sbjct: 299 AVVGYFQNSGKTGTQIPLVIPMEEQQSLLVVAQSQQAMSNMRTLVRGLDKENQNATSLRI 358 Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAK-----IVADKRTNSLIISGPEKARQ 249 I L+ SAE+ A LN + + S+ + A+ + D + + Sbjct: 359 IPLKNLSAEETAGQLNAIFANSNDGPGYEPDIRAQDLLTASIPDDGHGPEAENASSISAP 418 Query: 250 RITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMD 309 I D + +++ + N + + + Sbjct: 419 AIIRGKGRDDPDNGSG-----------------TAAQRAAKQRLSGRLNRLADTRRSSEE 461 Query: 310 NVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQW 369 V+I D + N+L++ + +++ V+ LD+ AQV++EA IVEV + L GVQ Sbjct: 462 AVSIVPDVRNNALLVHSKFRQFKRIRDVVRTLDVPLAQVVIEATIVEVALNDRLKYGVQA 521 Query: 370 ANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGV 429 G + ++ + + + Sbjct: 522 FLSGEGVEIRSSR-------------------LPDPADTGEPGAVALFDVDSVDGTTATF 562 Query: 430 LLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTS---GDNVFNTVERKT 486 +L AL + + ++++P + LD K A +VG +P L S N +E + Sbjct: 563 VLEALQTVTELKVISSPYLTVLDGKAARLSVGDQIPFLVQQTNASETGTTTTTNQIEVRD 622 Query: 487 VGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNS-TLGPTFNTRTIQNAVLVKTGETVVL 545 VG L+VTP + ++VLL ++QEVSS SS + L P + RTI + V++++G+ +L Sbjct: 623 VGVILQVTPSIRPDNSVLLNVQQEVSSAKSSGSGENLTPVISQRTINSDVVIESGKMALL 682 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GGL+ S+E +KVPL+ +P+VG LF+ T + + L+V I P ++R L++ Sbjct: 683 GGLIQSRSEEVTTKVPLMSKMPIVGNLFKQTDAVKDRTELLVMITPRVVRRSHQLDELTR 742 Query: 606 EKYTRYRQEQQQRIDGKSKALVGSEDL 632 +R DG A + Sbjct: 743 LLRSRSTGLHTSFSDGPDTAAEFRPEP 769 >UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae RepID=A7JQ17_PASHA Length = 437 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 89/401 (22%), Positives = 177/401 (44%), Gaps = 24/401 (5%) Query: 207 EILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEG 266 + ++++ +++ IV + + + ++ + + + Sbjct: 61 KSVDEIFKTLGKVNKLSLTQEDDIVYIHKKEEKAADLTPLPIMNLQNNGQNTPLVTAPKL 120 Query: 267 NTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITA 326 T+ L YAKA+ ++E LT K S + +N I DE++NSL++ Sbjct: 121 ITKTLKLHYAKASEVIESLT--------------KGSGTFLSENGYIHFDERSNSLIVKD 166 Query: 327 DQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPI 386 + + ++ +LD Q+ +EA IV + + LGV+W + GA + G Sbjct: 167 SAKSLKNIENLVKQLDQPTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGHYKFGGRLE 226 Query: 387 FNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATP 446 N V + + + + + + + L+AL N +I+A+P Sbjct: 227 GNGLNNVTNNLNVNFPITGGASAVLQ------VSSINSRVLDLELSALEQENSVEIIASP 280 Query: 447 SIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLE 506 ++T + K AS G ++P + + + VE K L+V P ++ + +LL+ Sbjct: 281 RLLTTNKKPASIKQGTEIPYVMY----NTKSEATDVEFKEAVLGLEVVPHLSTQNQILLD 336 Query: 507 IEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI 566 + +S +S S S+ T + + + V K GET+VLGG+ +++ KVP+LG I Sbjct: 337 LIVTQNSPNSQSGSSGLITIDKQELNTQVFAKHGETIVLGGIFQHLTQKGEDKVPILGSI 396 Query: 567 PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 P + +LF T + +KR L++F+ P I++ ++ + K K Sbjct: 397 PFIKRLFSQTRDKISKRELVIFVTPYILQSNEKSSNRKKSK 437 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 68/196 (34%), Gaps = 18/196 (9%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 + +I L + A NA + + GK +++D +++ + Sbjct: 1 MWRIFIYFLCGFSL-----AYANTISIVLKNAPTSLIFTYLAEETGKNMVLDDNIETKST 55 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMI-------ADS 116 +R + + + F ++ + S+ D+ + + + Sbjct: 56 LRLEN----KSVDEIFKTLGKVNKLSLTQEDDIVYIHKKEEKAADLTPLPIMNLQNNGQN 111 Query: 117 SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDA--GSVGNVVHYEPSNVLILTGRASTI 174 + +L+T+ + L A ++ L + G + E SN LI+ A ++ Sbjct: 112 TPLVTAPKLITKTLKLHYAKASEVIESLTKGSGTFLSENGYIHFDERSNSLIVKDSAKSL 171 Query: 175 NKLIEVIKRVDVIGTE 190 + ++K++D + Sbjct: 172 KNIENLVKQLDQPTEQ 187 >UniRef50_Q0EXA5 Probable pilQ; fimbrial type-4 assembly signal peptide protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXA5_9PROT Length = 793 Score = 280 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 102/510 (20%), Positives = 200/510 (39%), Gaps = 49/510 (9%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTI---NKLIEVIKRVDVI 187 P+E + A + +R + V Y+ NVL +T + + + + + + + Sbjct: 294 PVEQIDAYSVNKDVRIVTRLRQKSVVSSYQSGNVLTVTIKPQDMVASARADDEAVKSEKV 353 Query: 188 GTEKQQIIHLEYAS------------------AEDLAEILNQLISESHGKSQMPALLSAK 229 T ++ + + ++D+ +L + + + +LSA+ Sbjct: 354 YTGQKVTFNYKDIDIRNALKLIAEMSDFNIIMSDDVKGVLTMRLIDVPWDQALDLILSAR 413 Query: 230 IVADKRTNSLIISGPEKAR--QRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTG 287 + ++ +++ P VE+ T L YA ++ +L G Sbjct: 414 GLGKEQNGNVVRIAPLAVLKADANARKEAKQSVEDVAPLETEFITLGYASVNDVKTILEG 473 Query: 288 VS----------------EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQ 331 S + + + I DE++N+++IT + Sbjct: 474 GSVKTEVTSAGGAAGGTTGANGTGQTVSSSSELKLLSERGVIMLDERSNTMIITDTRERL 533 Query: 332 EKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQ 391 + +IA +D QV+VEA IVE D +LGV+W G +N G Sbjct: 534 NNIKRLIAVIDKPMQQVMVEARIVEATDTFSRDLGVKW-----GGTLNSNGGGYTHTVTG 588 Query: 392 GVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTL 451 + + + +A A + + + + L+A + + ++++P + T Sbjct: 589 AASAPQNVVDLGAAVKAGAGGAIGYTLGTLNNALNLNLELSAAEAEGQIKVVSSPRVFTS 648 Query: 452 DNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 + + A Q +P TT+ + + K+ LKVTPQ+ +++++ Sbjct: 649 NLQEALIEQDQQIPFQV---TTASTPPVVSYQLKSAKLTLKVTPQITADKRIIMQLVVNK 705 Query: 512 SSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 +N+ PT + + I +LVK GET+VLGG+ + +QV+ VP L +IP +G Sbjct: 706 D--TPVANTVGPPTIDKKQIMTKLLVKNGETMVLGGIYTQTTSDQVNGVPGLQNIPFIGN 763 Query: 572 LFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 F+ R + L++FI PTII DD Sbjct: 764 FFKRKQKVRNRNELLIFITPTIIADDGPKN 793 Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 46/367 (12%), Positives = 105/367 (28%), Gaps = 53/367 (14%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 ++ N+ + DIR ++++ + I++ V+G +++R D + I Sbjct: 354 YTGQKVTFNYKDIDIRNALKLIAEMSDFNIIMSDDVKGVLTMRLID-VPWDQALDL---I 409 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSR-PGVGDELVTRIVPLENVPARDLA 141 L G N +++ A +K ++ + L T + L D+ Sbjct: 410 LSARGLGKEQNGN-VVRIAPLAVLKADANARKEAKQSVEDVAPLETEFITLGYASVNDVK 468 Query: 142 PLLR--------------------------------QMMDAGSVGNVVHYEPSNVLILTG 169 +L ++ G ++ E SN +I+T Sbjct: 469 TILEGGSVKTEVTSAGGAAGGTTGANGTGQTVSSSSELKLLSERGVIMLDERSNTMIITD 528 Query: 170 RASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAK 229 +N + +I +D + + A D L + G Sbjct: 529 TRERLNNIKRLIAVIDKPMQQVM--VEARIVEATDTFS--RDLGVKWGGTLNSNGGGYTH 584 Query: 230 IVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGV- 288 V + + A + + L A+A ++V++ Sbjct: 585 TVTGAASAPQNVVDLGAAVKAGAGGAIGYTLGTLNNALNLNLELSAAEAEGQIKVVSSPR 644 Query: 289 -----SEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL-- 341 ++ E+ + A ++ ++ L + +I +L Sbjct: 645 VFTSNLQEALIEQDQQIPFQVTTASTPPVVSYQLKSAKLTLKVTP-QITADKRIIMQLVV 703 Query: 342 --DIRRA 346 D A Sbjct: 704 NKDTPVA 710 >UniRef50_A9GGP4 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP4_SORC5 Length = 774 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 92/525 (17%), Positives = 179/525 (34%), Gaps = 58/525 (11%) Query: 100 VVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHY 159 + +A + G V A +++ G + Sbjct: 282 IAADGGAARRTRTVAREALLDDGAPKVETSF-------EGAASSEESLVEPDQAGAFMPA 334 Query: 160 EPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGK 219 TGR ++ + + + + +A++++ + + Sbjct: 335 IAGQQRRFTGRRIDLDL---KDADIHNVLRLISDVGRVNIVTADNVSGTVTIRMRNVPWD 391 Query: 220 SQMPALLSAKIVADKRTNSLIISGPEKARQRITSLL--KSLDVEESEEGNTRVYYLKYAK 277 + +L AK + R ++I P + L + + TR+ + YA Sbjct: 392 QALETVLQAKGLGVVRQGNMIRVAPIADLNKERELAIARRKSELQLAPLETRLIPINYAD 451 Query: 278 ATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATV 337 A +L + S ++ DE+TN L+ ++ + Sbjct: 452 AKDLQD------------------RSKDMLSPRGSLAVDERTNVLIARDVAGNLNQIEEL 493 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADY- 396 + LD + QVL+EA +VE ++G+QW + N +F +A G+A Sbjct: 494 VRSLDTQTPQVLIEARVVEATSRYVRDIGIQWGGDGTFSAATGNPTGLVFPSAIGIAGGA 553 Query: 397 ------------------KKNGGITSANPAWDMFSAYNGMAAGFFNG--DWGVLLTALAS 436 N + G G N + GV L+A + Sbjct: 554 TDSNSPTGGLSPFSSQVSNPNFAVNLPAIVGAGQGGALGFTLGSINNTVNLGVRLSAAEA 613 Query: 437 NNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQ 496 + ++++P I+TLDN+ A + G +P S + +L V P Sbjct: 614 SGMLRVVSSPRILTLDNREARISQGTLIPFSQISAQG------VQTTFQEAKLQLLVKPH 667 Query: 497 VNEGDAVLLEIEQEVSSVDSSSNST-LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKE 555 V +V + ++ D + S PT R + +L+ G T V+GG+ + Sbjct: 668 VTSDGSVAMHVKINRDEPDFNQTSARGDPTILKREAETDLLIMDGHTAVIGGIFTRNTGR 727 Query: 556 QVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY 600 + +VP GDIP++G LF+ + L++F+ P I+ + Sbjct: 728 NLDQVPFFGDIPVLGLLFQRRRASDTRNELVIFLTPRIVNRAEAL 772 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 105/344 (30%), Gaps = 38/344 (11%) Query: 11 LLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTF 70 + + + +ADI + ++ I+ +V GT+++R Sbjct: 330 AFMPAIAGQQRRFTGRRIDLDLKDADIHNVLRLISDVGRVNIVTADNVSGTVTIRM-RNV 388 Query: 71 SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIV 130 + ++L G V+ N + K IA L TR++ Sbjct: 389 PWDQA---LETVLQAKGLGVVRQGNMIRVAPIADLNKERELAIARRKSELQLAPLETRLI 445 Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 P+ A+DL + M+ G++ E +NVLI A +N++ E+++ +D + Sbjct: 446 PINYADAKDLQDRSKDMLSP--RGSLAVDERTNVLIARDVAGNLNQIEELVRSLDTQTPQ 503 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 A + + +A N + P Sbjct: 504 VL-------IEARVVEATSRYVRDIGIQWGGDGTFSAATG------NPTGLVFPSAIGIA 550 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 + + +++V +A V + V G ++ Sbjct: 551 GGATDSNSPTGGLSPFSSQVSNPNFA-----VNLPAIVGAGQGGALGFTLGSINNTVNLG 605 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAII 354 V ++A E + L + + + LD R EA I Sbjct: 606 VRLSAAEASGMLRVVSSPRILT--------LDNR------EARI 635 >UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TDF1_RICCO Length = 536 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 100/572 (17%), Positives = 209/572 (36%), Gaps = 74/572 (12%) Query: 46 QHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSAN 105 + GK +++D N Q L++ ++ L K ++ Sbjct: 23 RQQGKNLIVD---------FQNTAVPQN-----LERRLNVTNFATPVLTIDTFKKGKNTR 68 Query: 106 VKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVL 165 + P + S + + + P+ P + + + + ++L Sbjct: 69 MVIEPKGDWEHSAYQTDRQFIVEVKPIVFDPNKIVQGSKTGFSGEKLSLDFNGIDVKSLL 128 Query: 166 ILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPAL 225 + G + N ++ ++ + + + + + + Sbjct: 129 RIIGDFTGKNVVV-----------------------SDSIQGTITLRLKDVPWDQALDII 165 Query: 226 LSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVE 283 + K + + ++ P E A +R + ++E++ T+ + +KY KA ++ Sbjct: 166 MKQKGLGMDNLGNTLVFAPKEEIAARRKQDQEQENQIDETKPLVTQSFQIKYQKAADIKT 225 Query: 284 VLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDI 343 +++ P D TN++ + + K+ ++ ++DI Sbjct: 226 LISD--------------PKQPLLSKRGTAVVDPSTNTMFVKDIDTSMTKIQEILNKIDI 271 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG-- 401 QVL+E+ IV+ D G +LG ++ A G G Sbjct: 272 PSRQVLIESRIVQANDTFGKSLGARFGVVKNNALTAKGLNPGNDVLTSGSLSSTYATGQA 331 Query: 402 ------------ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIV 449 + ++ A + SA + + L+A S++K +++P ++ Sbjct: 332 KQTTTPDDLNVNLPASATAGTVSSAALTLLRLPAGFLLNMELSAAESDSKIKTISSPRVI 391 Query: 450 TLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQ 509 T + + A+F+ G ++P + + + +V K + VTPQ+ D + L+IE Sbjct: 392 TANQQTATFDAGTEIPYQQATSSGA-----TSVSFKKATLGVNVTPQITPDDKINLDIEV 446 Query: 510 EVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLV 569 V N P+ +T ++ VLV GET VLGG L + + +VP IP+V Sbjct: 447 TKDDVGQIFNGV--PSIDTNKVKTKVLVDNGETAVLGGFLIESKNDSNQRVPFFSSIPVV 504 Query: 570 GQLFRYTSTERAKRNLMVFIRPTIIRDDDVYR 601 G LF+ T +K+ L+ FI P I+ D Sbjct: 505 GNLFKSTLNTHSKKELLFFITPKIMSDAMQLN 536 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 103/300 (34%), Gaps = 17/300 (5%) Query: 24 ENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSIL 83 E+ +FN D++ + I+G GK +++ S+QGTI++R + I+ Sbjct: 111 SGEKLSLDFNGIDVKSLLRIIGDFTGKNVVVSDSIQGTITLRL-KDVPWDQALDI---IM 166 Query: 84 DLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPL 143 G + L N + + ++ LVT+ ++ A D+ L Sbjct: 167 KQKGLGMDNLGNTLVFAPKEEIAARRKQDQEQENQIDETKPLVTQSFQIKYQKAADIKTL 226 Query: 144 L----RQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEY 199 + + ++ G V +N + + +++ K+ E++ ++D+ + + Sbjct: 227 ISDPKQPLLSK--RGTAVVDPSTNTMFVKDIDTSMTKIQEILNKIDIPSRQVLIESRIVQ 284 Query: 200 ASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLD 259 A+ + + L + L+ + +A+Q T +++ Sbjct: 285 AN-DTFGKSLGARFGVVKNNALTAKGLNPGNDVLTSGSLSSTYATGQAKQTTTPDDLNVN 343 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 + S T + A + L + ITA++QT Sbjct: 344 LPASATAGTV------SSAALTLLRLPAGFLLNMELSAAESDSKIKTISSPRVITANQQT 397 >UniRef50_Q7UHD1 General secretion pathway protein D (OutD) n=1 Tax=Rhodopirellula baltica RepID=Q7UHD1_RHOBA Length = 822 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 126/622 (20%), Positives = 222/622 (35%), Gaps = 105/622 (16%) Query: 29 GANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGY 88 F +++ V ++ I+ + G +S + +IL GY Sbjct: 123 SITFRKTSLQEVVFLLSDLWNINIVAGEKITGNVSGVFKE----APLRDVLSAILTSSGY 178 Query: 89 SVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQM- 147 I N + + SP + +R + +++ + Sbjct: 179 GYIAAGNSLVVLPLDEVGTGSP-------------DFESRTLQFRAADEAEMSSTIAAAQ 225 Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAE 207 + G + +++ I+++ +++ A Sbjct: 226 LLLSDRGRIQPI-GRGAILVVDSKDNIDRVQQMLI-------------------AMLPEA 265 Query: 208 ILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGN 267 L + S G S ++ V D Sbjct: 266 TLQSTSNPSDGTSPGFQRPASPNVYD-------------------------------AMA 294 Query: 268 TRVYYL--KYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVIT 325 T + YL ++ +A+ + E L G + ++ E N ++I Sbjct: 295 TEIIYLTPQFTEASEMRESLEGALG------------------EGTIVSVYEAENRILIK 336 Query: 326 ADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLP 385 +++ E + +LD+ RAQV + A+I +V LGV W G + T Sbjct: 337 GNRAQLELASQAFKQLDVPRAQVRITALIYDVSLEELEELGVNWG---RGFRLDTTDESA 393 Query: 386 IFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILAT 445 + + A V G + ++ G+ D VLL AL S+++ +LA Sbjct: 394 LADLAGNVEKAVTFGTL------GSGGASSFGIRTLTDTFDTSVLLRALDSSDEAKLLAD 447 Query: 446 PSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLL 505 PSI +D + AS + Q +P+++ S + VF VE K G LKVTP+++ + + L Sbjct: 448 PSITAIDRREASIKIVQQIPIVAASPAEGSNVVFAQVEFKDAGIILKVTPRISNDNTIEL 507 Query: 506 EIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGD 565 +++ E S P ++RT + V V G LGGL E S VP L D Sbjct: 508 QVQPEYS--VKVGEIENNPVIDSRTAETTVRVANGHMFTLGGLRQKRIIEGTSGVPYLRD 565 Query: 566 IPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKA 625 + VG+LFR STE + L+VF++P II D S++ +++D A Sbjct: 566 LKYVGKLFRSHSTEVRESELIVFLKPEIISPYDHGNERSRQAM----CVANRQLDEIPYA 621 Query: 626 LVGSEDLPVLDENTFNSHAPAP 647 V + D+N N H P P Sbjct: 622 SVCPQTPYCYDKNCPNHH-PRP 642 >UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Tax=Idiomarina RepID=Q5QV49_IDILO Length = 427 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 86/361 (23%), Positives = 158/361 (43%), Gaps = 38/361 (10%) Query: 241 ISGPEKARQRITSLLKSLDVEESEEGNTRVYY-----LKYAKATNLVEVLTGVSEKLKDE 295 + R+ + +DV ++ Y+ + +AKA++L ++L + Sbjct: 95 LIASHDLAIRLQGSMLRIDVAGEHTTDSNEYHSILLSVNFAKASDLAKLLKNEQQ----- 149 Query: 296 KGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIV 355 S N A++ D +TN+L++ + ++ LD+ QVL+EA +V Sbjct: 150 ---------SFLSPNGAVSVDARTNTLILRDTPEQLATIRQLVNDLDVPVKQVLIEARMV 200 Query: 356 EVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAY 415 V+ LG++W G + G + + G ++ Sbjct: 201 TVKANVSKELGIRWGVSEYGLAIPEDAGSFVKGMQVDLPTAAPAGTFSA----------- 249 Query: 416 NGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSG 475 +A + + LTAL NK +I+ +P I T + + A G ++P + + + Sbjct: 250 -NLARLSDDILLDLELTALEQENKAEIITSPKIFTSNQQPAYIEQGTEIPYVETAAHGA- 307 Query: 476 DNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPT--FNTRTIQN 533 V+ K L VTPQ+ + VL+E+ ++ + + GP +T+ + Sbjct: 308 ----TAVQFKKAVMGLSVTPQITPNNHVLMELTITQNTRGDTVATPTGPAVAIDTQEMST 363 Query: 534 AVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTI 593 VL K GET+VLGG+ + + S+VP+LG +PL+G+LF + KR LM+F+ PTI Sbjct: 364 RVLAKNGETIVLGGIFQEHNLNDDSRVPILGSLPLIGKLFSHQQQRDEKRELMIFVTPTI 423 Query: 594 I 594 + Sbjct: 424 L 424 Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 23/170 (13%) Query: 26 EQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDL 85 + N +R ++++ IL+ +V+G S++ N + F +++ Sbjct: 43 QPVSLNTRKMPLRDLIQLLADQHQLNILMTDNVKGESSLKLNGV----AWQDAFATLIAS 98 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 + + I L L++ +E + ++ + A DLA LL+ Sbjct: 99 HDLA-IRLQGSMLRI------------DVAGEHTTDSNEYHSILLSVNFAKASDLAKLLK 145 Query: 146 ----QMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 + G V +N LIL + + +++ +DV + Sbjct: 146 NEQQSFLSPN--GAVSVDARTNTLILRDTPEQLATIRQLVNDLDVPVKQV 193 >UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHB7_9DELT Length = 1125 Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats. Identities = 87/429 (20%), Positives = 164/429 (38%), Gaps = 47/429 (10%) Query: 194 IIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ--RI 251 I + + ++ + +S + +L + + + ++I + + R Sbjct: 718 IGRVNIIAGPEVQGTVTMKLSAVPWDQALDIILRSLNLGMVQEGNVIRVATQATLEDERR 777 Query: 252 TSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV 311 ++ ++ + + TR+ L YA +++ + V Sbjct: 778 KAIEEANARVQLKPLETRLISLSYADVGDMLPKVQSVLSS------------------RG 819 Query: 312 AITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWAN 371 +T D +TN+L++ +++ +LD + QVL+EA IVE + LG+QW Sbjct: 820 TVTPDTRTNTLIVMDVAENIALAESLVRQLDSQTPQVLIEARIVEARTNWLRQLGIQWGF 879 Query: 372 KNVGAQQFTNTGLPIFNAAQ------------------GVADYKKNGGITSANPAWDMFS 413 V + N +F A A N + Sbjct: 880 DFVASPGTGNPTGLLFPNAIGIGGGSGSNQSPVNGLILPGAAANPNYAVDLPAVVGTGSG 939 Query: 414 AYNGMAAGFFNGDWG--VLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 G + G +G+ + L+A + I++ P IVTLDN A G +P+ S Sbjct: 940 GALGFSFGSLSGNLNTNLRLSAAENEGDVRIISAPKIVTLDNTEAQIEQGVQIPIAQVSA 999 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST-LGPTFNTRT 530 L+VTPQV AVLLE+E + + D + PT T++ Sbjct: 1000 QGVNT------RYVNATLGLRVTPQVTNEGAVLLEVEVQKNEADFVNTGARGDPTILTKS 1053 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 ++ +L+ G+T V+GG+ SKVP DIP++G F+ + + +++F+ Sbjct: 1054 ARSQLLITDGDTAVIGGIYTRNQAINHSKVPWFADIPIIGWFFKNRTERDDRSEMLIFLT 1113 Query: 591 PTIIRDDDV 599 P I+ + Sbjct: 1114 PRIVNRSES 1122 >UniRef50_Q5SII6 General secretion pathway protein (PilQ) n=5 Tax=Bacteria RepID=Q5SII6_THET8 Length = 757 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 122/559 (21%), Positives = 207/559 (37%), Gaps = 65/559 (11%) Query: 56 PSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIAD 115 P V+ T ++ + E F S L SV+ + V+ + + Sbjct: 250 PRVEKTYTL---TYATFPELLAFLQSRLPEAQISVVPTNPQRAIVLATEEDHARLSELLK 306 Query: 116 SSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSN--VLILTGRAST 173 ++ V R+ L+N+ + L+ +++ G + P N L+L + Sbjct: 307 TADVPKT---VRRVYALQNLTFAEAQERLKPLLEKDLKGARLESLPGNPKALLLEAPEAE 363 Query: 174 INKLIEVIKRVDVIGTEKQ--------QIIHLEYASAEDLAEILNQLISESHGKSQMPAL 225 E++K +DV Q ++ L YA+AE +A L + + Sbjct: 364 HALFAEILKALDVPPQAPQAPQEATLRRLYPLRYANAEQVAPFLAR------------EV 411 Query: 226 LSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNT--RVYYLKYAKATNLVE 283 + L + G EK + SLL +D + R Y L AKA L + Sbjct: 412 PGIVVQTVPGQPVLSVRGTEKQLAEVESLLAQIDRAPEQGPPVFQRAYQLSNAKAVELAQ 471 Query: 284 VLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDI 343 VL + + + + + + + AD +TN+L++T Q + +I +LD Sbjct: 472 VLQEALKARQAQN--QGQQNQALPTREATVVADPRTNTLIVTGTQEDLALVEGLIPKLDQ 529 Query: 344 RRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGIT 403 QV + I EVQ +LG++W GG Sbjct: 530 PVPQVSLRVRIQEVQSNLTRSLGLKW--------------------------NSIAGGNV 563 Query: 404 SANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 +A+ S + L AL + L + L+N+ A G+ Sbjct: 564 AASILDSGLSLIFDSTRSLAALNIMATLDALQQQGLSRALRDVNQTVLNNQTARLQSGET 623 Query: 464 VPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVS-SVDSSSNSTL 522 + F VG ++VTPQ+ +LL I+ E+S +V + Sbjct: 624 FFIRRVVNDQVERVPF------DVGLIVEVTPQITADGQILLNIKAEISGNVQRNPVDGD 677 Query: 523 GPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAK 582 F + + + VK GETVVLGGL S + VPLL DIPL+G+LF+ + E Sbjct: 678 VDRFTKQVVTTTLRVKDGETVVLGGLTSQESNQSQQGVPLLMDIPLIGELFKQRTNESTD 737 Query: 583 RNLMVFIRPTIIRDDDVYR 601 + L+V I I+++ Sbjct: 738 KELLVVITADILKETASAN 756 Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 47/391 (12%), Positives = 105/391 (26%), Gaps = 100/391 (25%) Query: 28 YGANFNNADIRQFVEIVGQHLGKTILID-----PSV------------------------ 58 +F R+ +++ G +D P V Sbjct: 89 IKLDFQGKPFREVWDLLFATYGNQYSLDYLFLPPDVVVVAPTQVITALVDAPSRTGAMER 148 Query: 59 -------------------QGT----ISVRSNDTFSQQEYYQFF---LSILDLYGYSVIT 92 QG +++ + Q + F + L++ V Sbjct: 149 RPYIVGIPEIAYKRTETDAQGQPRTVVNIEGAKAWVQNDLLPFLSREAAGLNVNWIVVEE 208 Query: 93 LDN----GFLKVVRSANVK------TSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 + + + + V + L +L Sbjct: 209 GGRLKAVLSVLATPEQHARFSDILQRAGIDFRPLPALAQPKPRVEKTYTLTYATFPELLA 268 Query: 143 LLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASA 202 L+ + + V I+ +L E++K DV +++ L+ + Sbjct: 269 FLQSRLPEAQISVVPTNPQRA--IVLATEEDHARLSELLKTADVP-KTVRRVYALQNLTF 325 Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE 262 + E L L+ + +++ +L +L++ PE +LK+LDV Sbjct: 326 AEAQERLKPLLEKDLKGARLESLPG-------NPKALLLEAPEAEHALFAEILKALDVPP 378 Query: 263 SEEGN------TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITAD 316 R+Y L+YA A + L + + Sbjct: 379 QAPQAPQEATLRRLYPLRYANAEQVAPFLAREV-------------------PGIVVQTV 419 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 L + + ++ +++A++D Q Sbjct: 420 PGQPVLSVRGTEKQLAEVESLLAQIDRAPEQ 450 >UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVZ8_9DELT Length = 504 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 104/476 (21%), Positives = 183/476 (38%), Gaps = 60/476 (12%) Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAE 207 + S G+ E L + S I+ L ++ + ++++ A + Sbjct: 61 LAEESRGHTHEVEERESLDI--EPSHID-LEDIEPEPAHELPRDRVTLNMQQAPVATILR 117 Query: 208 ILNQLISESHGKS------------QMPALLSAKIVADKRTNSLIISGPEKARQRITSLL 255 L+++ ++ S +P + K + + S + G + + L Sbjct: 118 ALSRIADQNIIVSETVEGTANLNIRDVPWDQAFKSIIASQGLSYVWEGEILRIKSMQDLQ 177 Query: 256 KSLDVEES--------------EEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARK 301 LD R+ L YA L + L + D Sbjct: 178 HELDRAGLKEDIGRRKLAAELTAPLMHRIVKLNYADPEKLQDNLIRFLSRDGD------- 230 Query: 302 PSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGN 361 + +I DE+TNSL+I A ++ E++ I LD R Q+L+EA IVE Sbjct: 231 -----GEPHGSIVVDEETNSLMIQATRNDMERVHKAINHLDRPRPQILMEANIVEATQRT 285 Query: 362 GLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG 421 LGV+W+ + V D G + + + ++A Sbjct: 286 ARELGVRWSGRYV--------------TPLSFEDEVGFGDLLRDEAGYTGDMDLSVISAR 331 Query: 422 FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT 481 L AL + + +IL +PSI T+DN++A GQ VP + + S T Sbjct: 332 LPGSVLYAHLQALERDGEVNILTSPSITTMDNQMAFTEHGQRVPYETVDEDGS-----RT 386 Query: 482 VERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGE 541 VE + +L+V P V EG+ + ++I VD + + P T+ + ++V+ GE Sbjct: 387 VEFEDAVLRLEVVPSVMEGNHLKMDIRVNKDEVDFTRDVRGQPVIRTKHTETNLVVRDGE 446 Query: 542 TVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 T+V+ GL + + V L D+P +G LF+ E+ ++FI PTI+ Sbjct: 447 TIVISGLSKETLSDTERGVMGLRDLPGLGWLFKSREQEQEMEEFLIFITPTILEPQ 502 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 65/183 (35%), Gaps = 16/183 (8%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 A ++ N A + + + + + I++ +V+GT ++ + Sbjct: 94 PAHELPRDRVTLNMQQAPVATILRALSRIADQNIIVSETVEGTANLNI-RDVPWDQA--- 149 Query: 79 FLSILDLYGYSVITLDNGFLKVVRSANVKTS-------PGMIADSSRPGVGDELVTRIVP 131 F SI+ G S + L++ +++ + + L+ RIV Sbjct: 150 FKSIIASQGLSYVWEGE-ILRIKSMQDLQHELDRAGLKEDIGRRKLAAELTAPLMHRIVK 208 Query: 132 LENVPARDLAPLLRQMMDAGSV----GNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI 187 L L L + + G++V E +N L++ + + ++ + I +D Sbjct: 209 LNYADPEKLQDNLIRFLSRDGDGEPHGSIVVDEETNSLMIQATRNDMERVHKAINHLDRP 268 Query: 188 GTE 190 + Sbjct: 269 RPQ 271 >UniRef50_Q2SC13 Type II secretory pathway, component PulD n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SC13_HAHCH Length = 615 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 114/605 (18%), Positives = 196/605 (32%), Gaps = 96/605 (15%) Query: 1 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG 60 KGL + L+ + N Y N + ++ G + + P + G Sbjct: 3 FKGLIALLLTLVCSGAFAAEPRWNNSPYELYANGESLTDVLKNFAASYGIPVTVSPRIAG 62 Query: 61 TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG 120 T++ +Q FL IL D L R Sbjct: 63 TVNGSFKGESPRQ-----FLDILGKSFEFEWYYDGSTLHFFR------------------ 99 Query: 121 VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE- 179 GDE+V+RI+ L N+ L + ++ + ++ ++G +S ++ + E Sbjct: 100 -GDEIVSRIITLTNIKTSQLRNAVEKVGIWDERFSWKEMPDKGMVYISGPSSMVDLIQET 158 Query: 180 ------VIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVAD 233 + + Q+ L YA+A D + Sbjct: 159 ASVLESQVVTMPRRDQYSMQMFRLRYATAADRVQS------------------------- 193 Query: 234 KRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK 293 R +++ G + + + E S G V Sbjct: 194 YRGKEVVVPGMASVLRGALAAGQGKSGETSIGGPVGVL--------------------EG 233 Query: 294 DEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 + G + + AD +TNS+++ ++ LD QV V Sbjct: 234 KRTSSPVTSDMPGTGERAWVEADGRTNSIIVYDRLERMPMYKALVRNLDQPSEQVEVNVS 293 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 I+ V N LGV W ++ +F G+ N A GG Sbjct: 294 IISVSATNLKELGVSWQARDQKLGEFGYGGIDKQNPAPNKNQLAILGG----------AD 343 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 A + + AL + +++ PS+VT ++ A + V Sbjct: 344 ATFSTVLDSGLDYFIAKVNALVEDGDAQVVSRPSVVTSEHLEAVLDDSTTFHVRVQGNEQ 403 Query: 474 SGDNVFNTVERKTVGTKLKVTPQVNEGDA---VLLEIEQEVSSVDSSSNSTLGPTFNTRT 530 VG+ L+VTP + G+ + LE+ E + P T + Sbjct: 404 VDLFPVT------VGSVLRVTPHIQRGEEQKGINLEVTIEDGQ-QTGEEVDRIPVIKTSS 456 Query: 531 IQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIR 590 I +V G+++++GG D+ E V VPLL DIPL+G LFR T+ R K + + Sbjct: 457 INTQTVVGLGQSLLIGGFFQDYESESVGGVPLLKDIPLLGALFRTTNHNRKKMVKLFLMT 516 Query: 591 PTIIR 595 P II Sbjct: 517 PKIID 521 >UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9K2_BURGB Length = 649 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 43/425 (10%) Query: 210 NQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGN 267 + + + ALL A +A R +I P E A + E Sbjct: 239 TLRLRDVPWRDAFDALLDANGLAMARRGGVIWVAPVAELAARERARFETHARTAALEPLA 298 Query: 268 TRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITAD 327 +R + L+Y +A ++ +LTG ++ AD +TN L +T Sbjct: 299 SRAFVLRYPRAKDVARLLTG------------GAAGQRVLSRRGSVLADPRTNLLFVTDL 346 Query: 328 QSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQ-------WANKNVGAQQFT 380 ++A ++A+LD QVL+EA IVE + G LG + W GA Sbjct: 347 DGRLAQIAALLAQLDRPSRQVLIEARIVEGERGFSRELGARLALRSSAWGGSRAGAGAGG 406 Query: 381 NTGLPIFNAAQGVADYKKNGGITSANPAWDM---------------FSAYNGMAAGFFNG 425 + G + D G T +A + + Sbjct: 407 SGGSDGGAGGAAMPDSNPGGAATGIVGGPGGRLLDLSARPLAGFEAATAGLTLFVAGASR 466 Query: 426 DWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERK 485 + L+AL + + I+++P IVT D A G ++P + V+ + Sbjct: 467 LLDLELSALEAQGRGRIVSSPRIVTADRAPALIEQGTELPYQAKVGLGVSG-----VQFR 521 Query: 486 TVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVL 545 KL+V PQ+ V+L+++ SV S+++ GP +T+ ++ V ++ G TV + Sbjct: 522 RATLKLEVEPQITPEGHVVLDLDVAKDSVGESTDA--GPAIHTKHVRTRVEIENGGTVSI 579 Query: 546 GGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSK 605 GG+ + ++ V++VP+LG IP++G LFR+ + + L+V+I P ++ + + Sbjct: 580 GGIYESDRRDDVTRVPVLGKIPMLGALFRHRARRQRTAELVVYITPRVVGAQNGPPAGGP 639 Query: 606 EKYTR 610 Sbjct: 640 GSGDE 644 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 93/307 (30%), Gaps = 8/307 (2%) Query: 26 EQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDL 85 + + A + + + G++I++ VQG ++R ++ + LD Sbjct: 202 RRISLDLQQAPLAAVFDAFARFTGQSIVLSGRVQGAATLRL-RDVPWRDAFDAL---LDA 257 Query: 86 YGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR 145 G ++ + +R + L +R L A+D+A LL Sbjct: 258 NGLAMARRGGVIWVAPVAELAARERARFETHARTAALEPLASRAFVLRYPRAKDVARLLT 317 Query: 146 QMMDA----GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYAS 201 G+V+ +N+L +T + ++ ++ ++D + + Sbjct: 318 GGAAGQRVLSRRGSVLADPRTNLLFVTDLDGRLAQIAALLAQLDRPSRQVLIEARIVEGE 377 Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVE 261 E+ +L S A A + + P+ + + Sbjct: 378 RGFSRELGARLALRSSAWGGSRAGAGAGGSGGSDGGAGGAAMPDSNPGGAATGIVGGPGG 437 Query: 262 ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNS 321 + + R A L + G S L E + + I ++ + Sbjct: 438 RLLDLSARPLAGFEAATAGLTLFVAGASRLLDLELSALEAQGRGRIVSSPRIVTADRAPA 497 Query: 322 LVITADQ 328 L+ + Sbjct: 498 LIEQGTE 504 >UniRef50_B8DPS5 Type II and III secretion system protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPS5_DESVM Length = 552 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 107/508 (21%), Positives = 191/508 (37%), Gaps = 56/508 (11%) Query: 137 ARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 A + R + + + + L A+ +I V G+ + Sbjct: 72 AEEQVEQARPLPSVPVTLKLHNVDVGVALRSLAAAAG----KNIILSPGVKGSVNVNVNR 127 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLK 256 + ++ N L G+ ++ K V E A + + Sbjct: 128 VPWSDVFKGMLDSNGLDYAWQGELIKVITMADKKVEL-----------EHATLENQRMAQ 176 Query: 257 SLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITAD 316 L + T V ++YA+A L + L G K K ++ D Sbjct: 177 KLKGRKVGPMVTTVLDVRYAEAAELKKNLEGFLSKDDGGK------------PVGSVVVD 224 Query: 317 EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGA 376 TNSL+I A + Q+KL T+++ LD RAQ+ ++A IVE LG+QW N Sbjct: 225 TFTNSLIIQAVEDDQKKLMTLVSNLDKPRAQIQLKAHIVEATKETARELGIQWGGVNRVG 284 Query: 377 QQFTNT-------------------GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNG 417 + G + NG + + G Sbjct: 285 NMAGSNDLWVTPGGTGGTAGTSPYNGSYTPIFGAPGISGQGNGINFPIDTTGKSGAGSLG 344 Query: 418 MAAGFFNGD-WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 + G G+ + L+AL ++K +IL++PSI TLDN++A G+ VP +S + Sbjct: 345 LMFGTIGGNMLEMQLSALQESSKINILSSPSISTLDNQMAYTENGEKVPYVSTNAQGD-- 402 Query: 477 NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVL 536 V+ + +L++TP V + + L++ + VD + P + + ++ Sbjct: 403 ---REVKFEDAVLRLEITPHVIDDKNLKLKVLVKKDEVDLTRTVEGNPFIIKKQTETTLI 459 Query: 537 VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD 596 V+ GET+V+ GL D S VP L D+ +G LF S +++FI P ++ Sbjct: 460 VQDGETIVISGLTKDRKSTGRSGVPGLHDVEGLGWLFGSDSKASKLEEVLIFITPAVL-- 517 Query: 597 DDVYRSLSKEKYTRYRQEQQQRIDGKSK 624 YR ++++ T+ Q ++ Sbjct: 518 --PYREMAEQGATQQITVQPGQLGQAPT 543 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 18/215 (8%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 +N D+ + + GK I++ P V+G+++V N F +LD Sbjct: 86 PVTLKLHNVDVGVALRSLAAAAGKNIILSPGVKGSVNVNVNR-VPWS---DVFKGMLDSN 141 Query: 87 GYSVITLDNGFLKV------VRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDL 140 G + V + +A + +VT ++ + A +L Sbjct: 142 GLDYAWQGELIKVITMADKKVELEHATLENQRMAQKLKGRKVGPMVTTVLDVRYAEAAEL 201 Query: 141 APLLRQMMDAGS----VGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIH 196 L + VG+VV +N LI+ KL+ ++ +D + I Sbjct: 202 KKNLEGFLSKDDGGKPVGSVVVDTFTNSLIIQAVEDDQKKLMTLVSNLDKPRAQ----IQ 257 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAKIV 231 L+ E E +L + G +++ + + + Sbjct: 258 LKAHIVEATKETARELGIQWGGVNRVGNMAGSNDL 292 >UniRef50_D0LHN1 Type IV pilus secretin PilQ n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHN1_HALO1 Length = 1269 Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats. Identities = 101/604 (16%), Positives = 205/604 (33%), Gaps = 56/604 (9%) Query: 6 KITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVR 65 L+ P AE ++ ++ + +E + L + P ++ S R Sbjct: 697 ARVVIALSDRADPKVVRAEGKRVVLEIDDVTLPSKLE---RTLDTSAYRGP-IRAVSSYR 752 Query: 66 SNDTFSQQEYYQFFLSILDLYGYSVITLDNGF-LKVVRSANVKTSPGMIADSSRPGVGDE 124 S D + + + + +++ N +SA + + + Sbjct: 753 SPDDADK---MRLVVDLAYPAKHALKRSGNSLLWDFAKSAKRERQAARTQSARKRRPSGS 809 Query: 125 LVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRV 184 + +P + + V + G ++ + Sbjct: 810 ARAQSIP------APVVGGYGAASTPITQKTVAQLANQRRRVYRGTKIDLDLQN---VDI 860 Query: 185 DVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP 244 + + + ++++ + + + + +L++K + +R +L Sbjct: 861 HNVMRLLADVGGINIVVPDEVSAEVTVRLRQVPWDQALEVILASKGLWYRREGNLYRIAT 920 Query: 245 EKARQRITSLLKSLDVE--ESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKP 302 K ++E +++ L YA A+ L L + Sbjct: 921 RKQLDAEAEAEAERIAALIKAEAPEPQIFTLNYAVASQLKPQLEALL------------- 967 Query: 303 SSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNG 362 I DE+TNSL+I ++ + ++ ++ RLD + Q+ +EA IVE + Sbjct: 968 -----SPKGRIEIDERTNSLIINDVRAHRTRIIDLLTRLDTQTPQIQIEARIVEARSTFA 1022 Query: 363 LNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAG- 421 GVQW + A G+ +A+P + + Sbjct: 1023 REFGVQWGGSLLDANTGLVFPGNYGVVGGNTDSQTVGTGVAAASPDFAVNLPAATGTGAG 1082 Query: 422 ----------FFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQ 471 + + L+AL I++ P I L+N A + G +P+ S Sbjct: 1083 GALGFAFGSVGGGLNLTLRLSALEDTGTVRIISAPKITVLNNVEAEISQGVSIPISVISA 1142 Query: 472 TTSGDNVFNTVERKTVGTKLKVTPQVNEGD-AVLLEIEQEVSSVDSSSNST-LGPTFNTR 529 + L+VTP V++ D ++ ++++ + + D + PT + Sbjct: 1143 NG------VQTQFVQADLSLEVTPHVSQRDCSIAMDLQIQKNEADFVNTGARGDPTILRK 1196 Query: 530 TIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFI 589 VLV ET V+GG+ S SKVP LGD+PL+G LF+ + ++VFI Sbjct: 1197 EASTTVLVADNETTVIGGIYTRNSGLSYSKVPFLGDLPLLGWLFKNRRENDERTEVLVFI 1256 Query: 590 RPTI 593 P I Sbjct: 1257 TPRI 1260 >UniRef50_A5WCG3 Type IV pilus secretin PilQ n=2 Tax=Bacteria RepID=A5WCG3_PSYWF Length = 642 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 81/444 (18%), Positives = 165/444 (37%), Gaps = 53/444 (11%) Query: 198 EYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP--EKARQRITSLL 255 + + + L + + +L+++ + + ++I+ P + A+QR L Sbjct: 204 NIVATDQVTGSLMLNLVNVPWDQALDIILTSQQLGKQTQGNVILVAPLAQMAKQRAQQLA 263 Query: 256 KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNAR--------------- 300 + + L YAKA +L ++ S + Sbjct: 264 IEQQSQALMPLRSEYIRLNYAKAEDLQALIIKASGSPTPTPVAMQHLPASTAVANAPSAL 323 Query: 301 ---------KPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE 351 SS I D +TN+L+I + +I ++DI QV++E Sbjct: 324 PAVVTRLNLPVSSRLLSSRGVIAVDARTNTLIIKDTADSLSNIHALIKQIDIPVRQVMIE 383 Query: 352 AIIVEVQDGNGLNLGVQWANKNVG--------------------AQQFTNTGLPIFNAAQ 391 +V D +GV+W + G + NT N ++ Sbjct: 384 VRMVSATDNFSKEMGVKWGLLSKGVAHNDDLLVGASDQTLADLKSFSAPNTAYKGRNKSR 443 Query: 392 GVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTL 451 + + + + + L+A+ + + ++++TP I+TL Sbjct: 444 AGYAITRPDNLNVDLGISNPAGRIAFGLLSMSDLMIDLELSAMQAEGRGEVISTPKILTL 503 Query: 452 DNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEV 511 D + A+ + G +P S S+ T + + L+VTP + D + L++ E Sbjct: 504 DKQTATVSSGTKIPYQSESEGGG-----TTTQFEEALLSLQVTPSITPEDKISLQLNIEN 558 Query: 512 SSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQ 571 + N + +T + V V G+T+VLGG+ + KVP GD+P +G+ Sbjct: 559 GRPNPVGNGVIL--IDTDRLITRVTVGDGQTLVLGGIYRNQIFNNTQKVPFFGDLPYIGR 616 Query: 572 LFRYTSTERAKRNLMVFIRPTIIR 595 LF+ ++ L++F+ P +++ Sbjct: 617 LFKQDLRRNDQQELLIFVTPKLMQ 640 Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 66/227 (29%), Gaps = 46/227 (20%) Query: 18 PCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQ 77 + +F ++R + ++ Q I+ V G++ + + + Sbjct: 171 VTPKIYSGKPISVDFQQVEVRSVLHLLSQFTDTNIVATDQVTGSLMLNLVN-VPWDQALD 229 Query: 78 FFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPA 137 IL T N L + K +A + L + + L A Sbjct: 230 I---ILTSQQLGKQTQGNVILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKA 286 Query: 138 RDLAPLLRQMMDA----------------------------------------GSVGNVV 157 DL L+ + + S G + Sbjct: 287 EDLQALIIKASGSPTPTPVAMQHLPASTAVANAPSALPAVVTRLNLPVSSRLLSSRGVIA 346 Query: 158 HYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAED 204 +N LI+ A +++ + +IK++D+ + I + SA D Sbjct: 347 VDARTNTLIIKDTADSLSNIHALIKQIDIPVRQVM--IEVRMVSATD 391 >UniRef50_Q47JK8 Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal n=2 Tax=Betaproteobacteria RepID=Q47JK8_DECAR Length = 715 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 103/497 (20%), Positives = 195/497 (39%), Gaps = 34/497 (6%) Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 P+ +V + +R ++ + Y+ N I+ + ++++ + Sbjct: 217 PVTSVETKAFGDNVRMVITPMGLWEHNAYQSDNQFIV-EVKRVVEDPNKLVQGSKIGYQG 275 Query: 191 KQQIIHLEYASAEDLAEILNQLIS------------------ESHGKSQMPALLSAKIVA 232 + I+ + L ++ + + + + + K + Sbjct: 276 PRVSINYQNGDVRALLRLMAEELGLNAVISETVTGTTTLVLKDVPADQVIDIIFQQKGLD 335 Query: 233 DKRTNSLIISGP--EKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSE 290 ++ ++I+ P E A + + E E + L Y KA ++ +L G+ Sbjct: 336 MRKKGNIIMIAPRDEIATREKLEFESKQQISELEPLKLEQFQLNYQKAADVARLLAGLPP 395 Query: 291 KLKDEKGN-----ARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRR 345 + + AD Q+N + I S E++ + IA +D Sbjct: 396 LGAAGAAAAPAPGTNVAAQRILSKRGSAVADPQSNIIFINDIPSKLEEIRSFIAAIDTGA 455 Query: 346 AQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSA 405 QVL+EA +VE QD LG ++ N A Q +G+ + + A + + Sbjct: 456 RQVLIEARVVEAQDSFNRALGGKFGFLNKQAVQPAGSGINVAGGSSTTAGQSTSTPMVGV 515 Query: 406 NPAWDMFSAYNGMAAGFFNGD--WGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQD 463 N ++ + + L AL S+ I+++P ++T +N A G + Sbjct: 516 NLPSPSTGGSLALSLFTASFSRILNLELAALESDGLGKIVSSPRVITANNVKAKIEDGTE 575 Query: 464 VPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG 523 +P + + +SG TV K L+VTPQ+ V + + + D + L Sbjct: 576 IPYV--TTQSSGGTTTATVSFKPAKLSLEVTPQITPEGTVRMNLVVKKEEADWTKAVVLN 633 Query: 524 ----PTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTE 579 P + ++ V+V+ G TVV+GG+ ++ V KVPLLGDIP G LF+Y + Sbjct: 634 GYANPPIKSSVVETNVVVENGGTVVIGGVFITDTQNSVEKVPLLGDIPFFGWLFKYKNDI 693 Query: 580 RAKRNLMVFIRPTIIRD 596 +R L+VFI P +I D Sbjct: 694 GKRRELLVFITPRVISD 710 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 67/245 (27%), Gaps = 28/245 (11%) Query: 23 AENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSI 82 + + N+ N D+R + ++ + LG +I + + + I Sbjct: 273 YQGPRVSINYQNGDVRALLRLMAEELGLNAVISET-VTGTTTLVLKDVPADQVIDI---I 328 Query: 83 LDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAP 142 G + N + R + + L L A D+A Sbjct: 329 FQQKGLDMRKKGNIIMIAPRDEIATREKLEFESKQQISELEPLKLEQFQLNYQKAADVAR 388 Query: 143 LLRQMMDA---------------------GSVGNVVHYEPSNVLILTGRASTINKLIEVI 181 LL + G+ V SN++ + S + ++ I Sbjct: 389 LLAGLPPLGAAGAAAAPAPGTNVAAQRILSKRGSAVADPQSNIIFINDIPSKLEEIRSFI 448 Query: 182 KRVDVIGTEKQQIIHLEYASAED-LAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI 240 +D + +I A+D L + ++ PA + T + Sbjct: 449 AAIDTGARQV--LIEARVVEAQDSFNRALGGKFGFLNKQAVQPAGSGINVAGGSSTTAGQ 506 Query: 241 ISGPE 245 + Sbjct: 507 STSTP 511 >UniRef50_Q52498 Hypersensitivity response secretion protein hrpA n=6 Tax=Ralstonia solanacearum RepID=HRPA_RALSO Length = 568 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 102/610 (16%), Positives = 203/610 (33%), Gaps = 59/610 (9%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 + A + +++++ + DI++ + +G I V+G+++ Sbjct: 1 MAAALLLWTAGTVCAAPIPWQSQKFEYVADRKDIKEVLRDLGASQHVMTSISTQVEGSVT 60 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 N + +F + +G++ D L+V + +++ Sbjct: 61 GSFN-----ETPQKFLDRMAGTFGFAWY-YDGAVLRVTSANEAQSAT------------- 101 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKR 183 + L + L +M A S + + + S ++++G + + ++ + Sbjct: 102 ------IALTRASTAQVKRALTRMGIADSRFPIQYDDDSGSIVVSGPPRLVELVRDIAQV 155 Query: 184 VDVIGTEKQQI----IHLEYASAEDLAEILN----------QLISESHGKSQMPALLSAK 229 +D + + L YA A D +N +++ +G +A Sbjct: 156 IDRGREDANRTVVRAFPLRYAWATDHRVTVNGQSVNIRGVASILNSMYGGDGPSDSGTAP 215 Query: 230 IVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 D+R +S+ R +L + Y+ +G Sbjct: 216 RAQDRRLDSVAPGEASAGRAGTRALSSLGGGKSPLPPGGTGQYVGN----------SGPY 265 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVL 349 + R I AD ++NS+++ ++I LD R A + Sbjct: 266 APPPSGENRLRSDELDDRGSTPIIRADPRSNSVLVRDRADRMAAHQSLIESLDSRPAVLE 325 Query: 350 VEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAW 409 + A I+++ + LGV W N T G G D +A A Sbjct: 326 ISASIIDISENALEQLGVDWRLHNSRFDLQTGNGTNTMLNNPGSLDSVATTAGAAAAIAA 385 Query: 410 DMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG 469 G + ++AL ++ I A P + TLDN A + Q+ V Sbjct: 386 TPAGGVLSAVIGGGSRYLMARISALQQTDQARITANPKVATLDNTEAVMDNRQNFYVPVA 445 Query: 470 SQTTSGDNVFNTVERKTVGTKLKVTPQVNEGD---AVLLEIEQEVSSVDSSSNSTLGPTF 526 ++ + G L+V P V + + + E + S L P Sbjct: 446 GYQSADLYAIS------AGVSLRVLPMVVMDGGTVRIRMNVHIEDGQITSQQVGNL-PIT 498 Query: 527 NTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLM 586 + I L+ G+++++ G + + V VP L IPLVG LFR T + M Sbjct: 499 SQSEIDTQALINEGDSLLIAGYSVEQQSKSVDAVPGLSKIPLVGALFRTDQTTGKRFQRM 558 Query: 587 VFIRPTIIRD 596 + P +I Sbjct: 559 FLVTPRVITP 568 >UniRef50_B3TCB2 Putative bacterial type II and III secretion system protein n=2 Tax=environmental samples RepID=B3TCB2_9ARCH Length = 648 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 107/448 (23%), Positives = 180/448 (40%), Gaps = 39/448 (8%) Query: 149 DAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEI 208 + + + N+ + S N VI +V G+ ++I + + A ++ Sbjct: 239 KEKISLDFQNADVRNLFRIFAEISGFN----VILSPEVGGSVNIRMIDVPWNQAMEIILT 294 Query: 209 LNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNT 268 + L E G + + + A+ + ++ ++ + L+ +SE+ T Sbjct: 295 NSALGRECFGGNIVRVATKVTLAAED---------TARLSEKTRAVSERLNERDSEDLVT 345 Query: 269 RVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQ 328 V + +A T L L + KD IT D +TN+L++ + Sbjct: 346 EVVRVNHADITELSTSLNALKSARKDAL----------------ITIDTRTNTLILNDLR 389 Query: 329 SVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFN 388 + + I LDI QVL+EA IVE+ LG+ W N T TG F+ Sbjct: 390 HHVDDMLETIKILDISTPQVLIEAKIVEISKTFSQELGISWGLVNPEPGFPTVTGNSTFD 449 Query: 389 AAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSI 448 Q + D + I + N A + V L AL + K ++++P + Sbjct: 450 -TQFLVDLRPTVDIATGNVAGFDSLIQGFLPGNIA---LNVRLEALEKSGKGRVISSPRV 505 Query: 449 VTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIE 508 T DNK A G+D+P S N+++ L VTP V +++ + I+ Sbjct: 506 TTADNKEARVLSGRDIPYQVNSVEG------NSIQFVNAELSLTVTPHVTSDNSIYMTID 559 Query: 509 QEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPL 568 ++ D + + PT + + VLV GET VL G+ + S E VP +PL Sbjct: 560 ATKNAADFAQLAAGIPTITRKEMHTEVLVGNGETTVLAGIYESTSTENKKAVPWFSKLPL 619 Query: 569 VGQLFRYTSTERAKRNLMVFIRPTIIRD 596 VG LFR + L+VFI PTI+ Sbjct: 620 VGFLFRAFDDKDTINELLVFITPTIVET 647 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 122/327 (37%), Gaps = 22/327 (6%) Query: 19 CAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQF 78 E E+ +F NAD+R I + G +++ P V G++++R D + + Sbjct: 233 PILFGEKEKISLDFQNADVRNLFRIFAEISGFNVILSPEVGGSVNIRMID-VPWNQAMEI 291 Query: 79 FL--SIL--DLYGYSVITLDNGFLKVVRS-ANVKTSPGMIADSSRPGVGDELVTRIVPLE 133 L S L + +G +++ + A + +++ ++LVT +V + Sbjct: 292 ILTNSALGRECFGGNIVRVATKVTLAAEDTARLSEKTRAVSERLNERDSEDLVTEVVRVN 351 Query: 134 NVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE--- 190 + +L+ L + A + +N LIL ++ ++E IK +D+ + Sbjct: 352 HADITELSTSLNALKSARKDALITIDTRTNTLILNDLRHHVDDMLETIKILDISTPQVLI 411 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKS-QMPALLSAKIVADKRTNSLIISGPEKARQ 249 + +I+ + +++L + E + + + + D R I +G Sbjct: 412 EAKIVEISKTFSQELGISWGLVNPEPGFPTVTGNSTFDTQFLVDLRPTVDIATGNVAGFD 471 Query: 250 RITS------LLKSLDVEESE-EGNTRVY---YLKYAKATNLVEVLTGVSEKLKDEKGNA 299 + + ++ +E E G RV + A VL+G + Sbjct: 472 SLIQGFLPGNIALNVRLEALEKSGKGRVISSPRVTTADNKE-ARVLSGRDIPYQVNSVEG 530 Query: 300 RKPSSSGAMDNVAITADEQT-NSLVIT 325 A ++ +T + NS+ +T Sbjct: 531 NSIQFVNAELSLTVTPHVTSDNSIYMT 557 >UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMQ3_PELPD Length = 864 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 87/402 (21%), Positives = 166/402 (41%), Gaps = 31/402 (7%) Query: 193 QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRIT 252 ++ + + +D+ ++ + + +L AK + + +++ A + Sbjct: 490 EVSNKNFVLGDDVTGTISIKLVNVPWDQALDIILDAKDLETREIGNVLTIKKRGAFKEQL 549 Query: 253 SLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVA 312 + T + + Y+ A ++ L + + + ++ A Sbjct: 550 ---------VKQTTYTEYFSVNYSDAKSIKPQLEALLDPVLLKEKLA------------T 588 Query: 313 ITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK 372 ITAD++TN++++T+ QS +++ + ++DI QV++EA IVE +LGV W Sbjct: 589 ITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQVMIEARIVEATSTFTRSLGVNWGVH 648 Query: 373 NVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLT 432 A + G+ G + S A + L+ Sbjct: 649 YTDASGSLLGITQLDTGFGGITTAPPTSGTGDSAGGNMGIS----FGALGNGVQLDMRLS 704 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLK 492 A A+ I++ P + TL+NK A GQ +P T+ D + L+ Sbjct: 705 AAATAGLIKIISCPKVATLNNKKAKIAQGQQIPY------TASDGDNVETKFVEAALSLE 758 Query: 493 VTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDF 552 VTP +N + + I + S+ + S+ P NT+ +L++ GET V+GG+ D Sbjct: 759 VTPHINANGTISMNIVAKNDSMGDAVGSSTAPAINTKEATTEMLLRDGETTVIGGIFVDT 818 Query: 553 SKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 + + VP L DIP +G+ F+ S + K L+VFI P I+ Sbjct: 819 DNDSDAGVPFLMDIPAIGKFFKTNSKTKTKTELLVFITPRIM 860 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 87/277 (31%), Gaps = 26/277 (9%) Query: 16 LMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEY 75 + A + F +A++R+ +++ + K ++ V GTIS++ + + Sbjct: 460 PLGSAKEYWGRKVTLEFADAEVRKIFQLLSEVSNKNFVLGDDVTGTISIKLVN-VPWDQA 518 Query: 76 YQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENV 135 ILD + N V T + Sbjct: 519 LDI---ILDAKDLETREIGNVLTI-----------KKRGAFKEQLVKQTTYTEYFSVNYS 564 Query: 136 PARDLAPLLRQMMDA----GSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 A+ + P L ++D + + + +N +I+T S I+++ + ++D+ + Sbjct: 565 DAKSIKPQLEALLDPVLLKEKLATITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQV 624 Query: 192 QQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRI 251 A + + + + G A S + T I+ Sbjct: 625 MI-----EARIVEATSTFTRSLGVNWGVHYTDASGSLLGITQLDTGFGGITTAPPTSGTG 679 Query: 252 TSLLKSLDV--EESEEGNTRVYYLKYAKATNLVEVLT 286 S ++ + G L A L+++++ Sbjct: 680 DSAGGNMGISFGALGNGVQLDMRLSAAATAGLIKIIS 716 >UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIY3_THIDA Length = 656 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 117/586 (19%), Positives = 208/586 (35%), Gaps = 66/586 (11%) Query: 71 SQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIV 130 + + L + + + N L + + I + G + R Sbjct: 103 PRALALRANLETARRHE-AALQQANKALAAGKVDAAAQAAREILAQAPGHAGALALLRQT 161 Query: 131 PLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE 190 + P L NV + R S +N + + R+D T Sbjct: 162 QAAHAPDELAMRRLGPAFHKPITLEFRDAPLRNVFDMIARQSGLNFVFDKDVRLDTKATL 221 Query: 191 KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQR 250 + ++ A ++ L+ ++ + I D Sbjct: 222 FARNTPIDEA--------VDMLLMTGQLSKKVVNANTLLIYPD----------------- 256 Query: 251 ITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDN 310 + + +E + +YL A A + +L + + Sbjct: 257 -----QPQKQKAYQELMVKSFYLGNADAKATMAMLRTLVKAK------------------ 293 Query: 311 VAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWA 370 + DE+ N LV+ ++A D+ +V++E ++EV+ G L+LG+Q+ Sbjct: 294 -DLHVDERLNLLVMRDTPDAIRLAERIVAVQDLAEPEVMLEVEVLEVKRGRLLDLGIQYP 352 Query: 371 NKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVL 430 + L + A T+ P+ + + A Sbjct: 353 TN--------FSLLNLPPATSSTIGPGGVVTNTTPPPSVLTVESLKNITASQIAISPTPG 404 Query: 431 LTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTK 490 + ++ +ILA P I + + A ++G VPV++ S TTS V +V VG K Sbjct: 405 VDLRKQDSDVNILANPRIRVKNREKAKIHIGDKVPVIT-SNTTSTGVVSESVSYLDVGLK 463 Query: 491 LKVTPQVNEGDAVLLEIEQEVSSVDS---SSNSTLGPTFNTRTIQNAVLVKTGETVVLGG 547 L V P V + V + + EVS++ S N TL TR + +K GET VL G Sbjct: 464 LDVEPSVLMREDVQIRVGLEVSNIVREIRSGNGTLTYQIGTRNAGTTLRLKDGETQVLAG 523 Query: 548 LLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEK 607 L+ D + S++P LGD+PL+G+LF ER K +++ I P ++R D E Sbjct: 524 LISDEDRSTASRIPGLGDLPLIGRLFSSQRDERNKTEIVLLITPRVLRSDATRLPALTEF 583 Query: 608 YTRYRQEQ--QQRIDGKSKALVGSEDLPVLDEN--TFNSHAPAPSS 649 + + AL + P+ DE + ++ APAP S Sbjct: 584 RGGTENAIGGGGAVPFSAPALPEASQPPLPDEGPTSPSAIAPAPES 629 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 76/253 (30%), Gaps = 23/253 (9%) Query: 15 LLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQ--GTISVRSNDTFSQ 72 L M G A ++ F +A +R +++ + G + D V+ ++ Sbjct: 170 LAMRRLGPAFHKPITLEFRDAPLRNVFDMIARQSGLNFVFDKDVRLDTKATL-FARNTPI 228 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 E L S ++ L + K EL+ + L Sbjct: 229 DEAVDML---LMTGQLSKKVVNANTLLIYPDQPQKQ-----------KAYQELMVKSFYL 274 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQ 192 N A+ +LR ++ A ++ E N+L++ I ++ D+ E Sbjct: 275 GNADAKATMAMLRTLVKAK---DLHVDERLNLLVMRDTPDAIRLAERIVAVQDLAEPEVM 331 Query: 193 ---QIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQ 249 +++ ++ DL S + + + V T + E + Sbjct: 332 LEVEVLEVKRGRLLDLGIQYPTNFSLLNLPPATSSTIGPGGVVTNTTPPPSVLTVESLKN 391 Query: 250 RITSLLKSLDVEE 262 S + Sbjct: 392 ITASQIAISPTPG 404 >UniRef50_Q7UX59 General secretion pathway protein D [Precursor] n=1 Tax=Rhodopirellula baltica RepID=Q7UX59_RHOBA Length = 1265 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 122/614 (19%), Positives = 232/614 (37%), Gaps = 97/614 (15%) Query: 95 NGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLR--------- 145 N + ++ ++ + + ++ PL N A D+ +L+ Sbjct: 455 NSLIVSASPRDLAEVTRLVEEIDVQKIPSTAEIKVFPLTNARAEDMVEVLQEAISGEPEN 514 Query: 146 ------------QMMDAGSVGN------------VVHYEPSNVLILTGRASTINKLIEVI 181 ++ S GN + N +++ A + + E+I Sbjct: 515 IAGDTTAAATSLSIVSLNSPGNPILDSGILNGAVITADSNVNAVVVRAPAGGMPLIGELI 574 Query: 182 KRVDVIGTEKQ--QIIHLEYASAEDLAEILNQLISESHGKSQ-----------------M 222 +++D ++ +E A L L L + + Sbjct: 575 RQLDQTPGIDSLVKVFTIENGDATQLTTALQNLFGDDAATNGTSVGAGNLGELPSLSASE 634 Query: 223 PALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLV 282 AL D RTNS+I SG + + + S+L LD E E T V +LK+ A N+ Sbjct: 635 SALTPLVFSTDIRTNSIIASGSAEDLEVVESILLRLDSEGFAERITEVIWLKHQIAENVA 694 Query: 283 EVLTGVSEKLKDEKGNARKPSSSGAM-----DNVAITADEQTNSLVITADQSVQEKLATV 337 +T + + N + ++ A+ QTNS++++ + E++ + Sbjct: 695 LAITNYVSQRAQSRNNITQFQQGLGPLDLPDRDIVAVAEAQTNSVLLSVSPRIYEEVRQL 754 Query: 338 IARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANK--------------------NVGAQ 377 I RLD R VL++ +I EVQ +G +G ++ + + Sbjct: 755 IDRLDRRPPMVLIKTLIAEVQLDDGFEIGGEFGLQDSLLFDRGKATGAIATGNPASDPGF 814 Query: 378 QFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFF-----NGDWGVLLT 432 F T + + NA + + GITS + +G+ +G F + + L Sbjct: 815 NFGGTSVNLPNANSFGQENLASKGITSFGAGASQLTQLSGLNSGGFVFSAASESVNLFLR 874 Query: 433 ALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNT-----VERKTV 487 L N+ IL+ P I+T DN VGQ P + T G + +E + + Sbjct: 875 TLRVANRLQILSRPEIMTADNTEGFVQVGQSFPRPTELSFTGGTGGTASQPIIGIEDEEI 934 Query: 488 GTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLG----------PTFNTRTIQNAVLV 537 G L+VTP+V + + I+ S ++++ +G P + Q + Sbjct: 935 GIILRVTPRVGADGMIFMAIDASRSDINNNEGQIIGAFQDDVPIFVPAIDRTQAQATITA 994 Query: 538 KTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 G+TVV GGL+ + + +VP L +IP+VG F++ S + L+V + P ++ Sbjct: 995 FDGQTVVFGGLIQKVRQNRTRRVPYLSNIPVVGTFFKFDSEIEQRSELLVVMTPILVTGH 1054 Query: 598 DVYRSLSKEKYTRY 611 + + + + +R Sbjct: 1055 EDLEYVKQVESSRM 1068 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 64/387 (16%), Positives = 144/387 (37%), Gaps = 36/387 (9%) Query: 91 ITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMD- 149 + + +++ ++ D + + L++ + +A LL Q+ + Sbjct: 299 VPESGLIIVKGNKRDIQRVMDIVKDIEEKSKLTQPEIEVRQLQHADSNAVAALLTQLYED 358 Query: 150 ----AGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVI--GTEKQQIIHLEYASAE 203 ++ + N L+L GR I + ++I+++D T++ ++ L++ASA Sbjct: 359 VLSARQGDVSITALDSPNALLLIGRKEAIEAVNDLIEKIDQPIPETDRLRVFRLQHASAT 418 Query: 204 DLAEILNQLISESHGKSQMPAL---LSAKIVADKRTNSLIISGPEKARQRITSLLKSLDV 260 D + + G + + +I AD RTNSLI+S + +T L++ +DV Sbjct: 419 DAEATIQTFFTNQPGGDEENRPGLGVRVRISADYRTNSLIVSASPRDLAEVTRLVEEIDV 478 Query: 261 EE-SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAM----------- 308 ++ +V+ L A+A ++VEVL + +++ Sbjct: 479 QKIPSTAEIKVFPLTNARAEDMVEVLQEAISGEPENIAGDTTAAATSLSIVSLNSPGNPI 538 Query: 309 ------DNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVE--AIIVEVQDG 360 + ITAD N++V+ A + +I +LD ++ + +++G Sbjct: 539 LDSGILNGAVITADSNVNAVVVRAPAGGMPLIGELIRQLDQTPG---IDSLVKVFTIENG 595 Query: 361 NGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA 420 + L N T + N + + +T + D+ + + Sbjct: 596 DATQLTTALQNLFGDDAATNGTSVGAGNLGELPSLSASESALTPLVFSTDIRTNSIIASG 655 Query: 421 GFFNGDW--GVLLTALASNNKNDILAT 445 + + +LL L S + + Sbjct: 656 SAEDLEVVESILLR-LDSEGFAERITE 681 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 129/360 (35%), Gaps = 54/360 (15%) Query: 36 DIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYG----YSVI 91 DI++ ++IV K+ L P ++ ++ Q + +L + + Sbjct: 313 DIQRVMDIVKDIEEKSKLTQPEIEVRQLQHADSNAVAALLTQLYEDVLSARQGDVSITAL 372 Query: 92 TLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAG 151 N L + R ++ +I +P + + R+ L++ A D ++ Sbjct: 373 DSPNALLLIGRKEAIEAVNDLIEKIDQP-IPETDRLRVFRLQHASATDAEATIQTFFTNQ 431 Query: 152 SVG------------NVVHYEPSNVLILTGRASTINKLIEVIKRVD---VIGTEKQQIIH 196 G + +N LI++ + ++ +++ +D + T + ++ Sbjct: 432 PGGDEENRPGLGVRVRISADYRTNSLIVSASPRDLAEVTRLVEEIDVQKIPSTAEIKVFP 491 Query: 197 LEYASAEDLAEILNQLISESHGKSQMPALLSAK------------------------IVA 232 L A AED+ E+L + IS +A I A Sbjct: 492 LTNARAEDMVEVLQEAISGEPENIAGDTTAAATSLSIVSLNSPGNPILDSGILNGAVITA 551 Query: 233 DKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKL 292 D N++++ P I L++ LD + +V+ ++ AT L L + Sbjct: 552 DSNVNAVVVRAPAGGMPLIGELIRQLDQTPGIDSLVKVFTIENGDATQLTTALQNLFGDD 611 Query: 293 KDEKGNARKPSSSGAMDNVA----------ITADEQTNSLVITADQSVQEKLATVIARLD 342 G + + G + +++ + D +TNS++ + E + +++ RLD Sbjct: 612 AATNGTSVGAGNLGELPSLSASESALTPLVFSTDIRTNSIIASGSAEDLEVVESILLRLD 671 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 90/194 (46%), Gaps = 11/194 (5%) Query: 155 NVVHYEPSNVLILTGRASTINKLIEVIKRVDVIG---TEKQQIIHLEYASAEDLAEILNQ 211 + S ++I+ G I ++++++K ++ + ++ L++A + +A +L Q Sbjct: 295 EIQFVPESGLIIVKGNKRDIQRVMDIVKDIEEKSKLTQPEIEVRQLQHADSNAVAALLTQ 354 Query: 212 LISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVY 271 L + Q I A N+L++ G ++A + + L++ +D E RV+ Sbjct: 355 LYEDVLSARQGD----VSITALDSPNALLLIGRKEAIEAVNDLIEKIDQPIPETDRLRVF 410 Query: 272 YLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQ 331 L++A AT+ + + + + G V I+AD +TNSL+++A Sbjct: 411 RLQHASATDAEATIQTFFT----NQPGGDEENRPGLGVRVRISADYRTNSLIVSASPRDL 466 Query: 332 EKLATVIARLDIRR 345 ++ ++ +D+++ Sbjct: 467 AEVTRLVEEIDVQK 480 Score = 41.6 bits (96), Expect = 0.087, Method: Composition-based stats. Identities = 15/156 (9%), Positives = 48/156 (30%), Gaps = 4/156 (2%) Query: 195 IHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSL 254 + + + A+ +A L+ + G + P + +L A +L Sbjct: 50 LKVPASVADSVATRLSLQYLDQPGVTITPDDRPGGGLLVLAPPNLQSRIAADAATLSNNL 109 Query: 255 LKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNV--- 311 ++ + + + + + + + + ++ G + + R + Sbjct: 110 AQAAGSQAATPITVHLVNITWREVEDALRIIAGEDVPVTTSRNGERASFTLTMEKRGGSA 169 Query: 312 -AITADEQTNSLVITADQSVQEKLATVIARLDIRRA 346 + D + N++ +T + I +D Sbjct: 170 TRVEVDRRANAVTLTTSPLMHNTWRKTIQAIDQAPR 205 >UniRef50_B9Z6A5 Type II and III secretion system protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6A5_9NEIS Length = 659 Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 94/554 (16%), Positives = 197/554 (35%), Gaps = 23/554 (4%) Query: 61 TISVRSNDTFSQQEYY-QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRP 119 + S + ++ Q + L+ LK+ S R Sbjct: 50 KAYLFSQRERTVNQWLAQAVTAQLNGNFDEAEAGYRRILKIDPYNQRANSGLDSLAMDRR 109 Query: 120 GVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIE 179 R + + L+ Q++ + R K + Sbjct: 110 HSKLLDDARALQ-QKGSVDQAMALVGQVLADN--------PRHREARILQRKLNEAKPRD 160 Query: 180 VIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSL 239 + + + I LE+ A L + S + + + D + Sbjct: 161 TLASPQLKSALS-RPITLEFRDA-----ALKAVFEVISRTSGINFVFDKDVRPDLKATIF 214 Query: 240 IISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNA 299 + + + ++ + LD + VY AK + E++ E + Sbjct: 215 VRNSTIEDAIQLLLVTNQLDRRVLNDNTIMVYPNNPAKQKDYQELVIKNFYLANAEAKDT 274 Query: 300 RKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQD 359 + + D++ N +V+ + +IA D+ + +++ +VEV Sbjct: 275 ANLIRALLKTR-DVFVDDKRNLVVMRDTPEAVKVAERLIASQDLAEPEAILDVEVVEVNR 333 Query: 360 GNGLNLGVQWANKNVGA---QQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN 416 +LG+ W ++ + + N G G+ + + + N Sbjct: 334 ARLQSLGIDWPSQVGYGLLTGGTSTQTGTVTNPTTGAVTPVVTPGVAATVASGVINLRNN 393 Query: 417 GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD 476 + F + ++L A + ++LA P I +++ A ++G VPV + + Sbjct: 394 PLGLTTFIANPALVLHLQAQDTDANVLANPRIRVKNHEKAKIHIGDKVPVFTSTAV-VNA 452 Query: 477 NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSN--STLGPTFNTRTIQNA 534 + +V VG KL+V P + D V +++ EVSS+ + ++ +R Sbjct: 453 GIAQSVSYLDVGVKLEVKPSIGLDDDVTIDVGLEVSSIVKQVDFGTSTAYQIGSRAADTT 512 Query: 535 VLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 + ++ GET VL GL+ D + ++K+P LGD+P+VG+LF + R+K +++ I P I+ Sbjct: 513 LRLRDGETQVLAGLIQDEDRRSITKIPGLGDLPIVGRLFSSNNDSRSKSEIVLLITPHIV 572 Query: 595 RDDDVYRSLSKEKY 608 + D+ E Sbjct: 573 HNLDLPDRQISEFR 586 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 19/190 (10%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQ 73 L P A + F +A ++ E++ + G + D V+ +++ Sbjct: 161 TLASPQLKSALSRPITLEFRDAALKAVFEVISRTSGINFVFDKDVRP--DLKATIFVRNS 218 Query: 74 EYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLE 133 +L L++ + V + K ELV + L Sbjct: 219 TIEDAIQLLLVTNQLDRRVLNDNTIMVYPNNPAKQ-----------KDYQELVIKNFYLA 267 Query: 134 NVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE--- 190 N A+D A L+R ++ +V + N++++ + +I D+ E Sbjct: 268 NAEAKDTANLIRALLKTR---DVFVDDKRNLVVMRDTPEAVKVAERLIASQDLAEPEAIL 324 Query: 191 KQQIIHLEYA 200 +++ + A Sbjct: 325 DVEVVEVNRA 334 >UniRef50_C7LN99 Type IV pilus secretin PilQ n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LN99_DESBD Length = 693 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 90/512 (17%), Positives = 187/512 (36%), Gaps = 59/512 (11%) Query: 88 YSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQM 147 SV+ + +++ + + A + G GD + EN L Sbjct: 236 LSVLRKGDETHILIKGKGTQVAQADSAVAEAAGAGDAIA------ENASEIQELNTLFPG 289 Query: 148 MDAGSVGNVVHYEPSNVLILTGRASTINKLIEV-----IKRVDVIGTEKQQIIHLEYASA 202 M G + + + + + E+ I D+ G +++ + + A Sbjct: 290 MKERYTGERISIDLQDA----DVEHVLRLISEISGYNLILDDDISGKISLKLVDIPWDQA 345 Query: 203 EDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEE 262 DL + + + ++ I+ T L + + R ++ + ++ Sbjct: 346 LDLVLL----------QRGLGMVIKGNIMRIASTTKLEAERVQLQKAREAAIQAQVSMQN 395 Query: 263 SEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSL 322 T + Y A + + ++++D +TN L Sbjct: 396 LAPLKTEYMQINYNTAAEFEGKVKTMLTG------------------RGSVSSDPRTNIL 437 Query: 323 VITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNT 382 ++T + +++ + I +LD QV++EA +V D +LGV+W + Sbjct: 438 IVTDTEDTLKRVDSFIKKLDRAERQVMIEARLVYATDEFQRSLGVKWG------TSYATE 491 Query: 383 GLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDI 442 + Q + G G G L +NN Sbjct: 492 TAANLPSEQWRGTFASTGLNAINTVNGITLGGTIGKFLGEDLFALDAALQLGEANNLVKT 551 Query: 443 LATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDA 502 +++P I+TL+N A G + + S++ T E + K+ V PQ+ + Sbjct: 552 ISSPRILTLNNNRAEIQQGTKLATATESESGG-----TTTEYEEAVLKISVLPQITPDNK 606 Query: 503 VLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPL 562 ++L++E S + G +T+ + ++V ET+V+GG+ +++P Sbjct: 607 LILDLEISDDSPK-----SDGRDIDTKQTKTKMMVSDRETIVIGGVQKTTETSNTNQIPG 661 Query: 563 LGDIPLVGQLFRYTSTERAKRNLMVFIRPTII 594 LGD+P +G LF+ T ++K L++FI+P I+ Sbjct: 662 LGDVPGLGWLFKNTYDAKSKAELLIFIQPRIM 693 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 107/326 (32%), Gaps = 32/326 (9%) Query: 22 HAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLS 81 E+ + +AD+ + ++ + G +++D + G IS++ D + Sbjct: 293 RYTGERISIDLQDADVEHVLRLISEISGYNLILDDDISGKISLKLVD-IPWDQALDL--- 348 Query: 82 ILDLYGYSVITLDNGF-------LKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLEN 134 +L G ++ N L+ R K I L T + + Sbjct: 349 VLLQRGLGMVIKGNIMRIASTTKLEAERVQLQKAREAAIQAQVSMQNLAPLKTEYMQINY 408 Query: 135 VPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQI 194 A + ++ M+ G+V +N+LI+T T+ ++ IK++D + Sbjct: 409 NTAAEFEGKVKTML--TGRGSVSSDPRTNILIVTDTEDTLKRVDSFIKKLDRAERQVMIE 466 Query: 195 IHLEYAS--------AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGP-- 244 L YA+ + + + + S + A N + + G Sbjct: 467 ARLVYATDEFQRSLGVKWGTSYATETAANLPSEQWRGTFASTGLNAINTVNGITLGGTIG 526 Query: 245 EKARQRITSLLKSLDVEESEEGN-----TRVYYLKYAKAT-NLVEVLTGVSEKLKDEKGN 298 + + + +L +L + E+ R+ L +A L +E Sbjct: 527 KFLGEDLFALDAALQLGEANNLVKTISSPRILTLNNNRAEIQQGTKLATATESESGGTTT 586 Query: 299 ARKPSSSGAMDNVAITADEQTNSLVI 324 + + IT D N L++ Sbjct: 587 EYEEAVLKISVLPQITPD---NKLIL 609 >UniRef50_C8QE32 Type IV pilus secretin PilQ n=1 Tax=Pantoea sp. At-9b RepID=C8QE32_9ENTR Length = 421 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 77/401 (19%), Positives = 156/401 (38%), Gaps = 39/401 (9%) Query: 202 AEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPE--KARQRITSLLKSLD 259 A + L+ + + + + + ++ + +++ PE + Q + + Sbjct: 52 APGVEGRLSLRLEDIEWQRALALVARLARLSVVQEEGVLLIYPESWQQWQAQKIQAEREE 111 Query: 260 VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQT 319 ++ + YA A + L S ++T D +T Sbjct: 112 QQQQIALTQQTVTFHYANAGDAARSLQA---------------ERSLMTPRGSVTVDSRT 156 Query: 320 NSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQF 379 NSL++ ++ + LD+ QV + A IV + + + LGV W Sbjct: 157 NSLLLRDTPRALQETVRWLNALDLPLEQVELSAHIVTISEEHLRELGVNWGL-------- 208 Query: 380 TNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNK 439 + A+ V +N + + + L+AL ++ Sbjct: 209 --------SPAEEVMQTLRNPQLAIPLAVSNPAFRMGVTLGHIGGDLLNLELSALEQESQ 260 Query: 440 NDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNE 499 DI+A+P + T + A+ G ++P S G++ +E K ++VTP V Sbjct: 261 IDIIASPRLFTSHQQTATIKQGTEIPYEVKS----GNSGATAIEFKEAVLGMEVTPVVLG 316 Query: 500 GDAVLLEIEQEVSSVDSSSNST--LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQV 557 + L++ + S N+ + + + I V ++ GET+ LGG+ + Sbjct: 317 NGRIQLKLRLSQNMPGRSINTGEHQTLSIDKQEIDTQVTLRDGETLALGGIFQQQRAQNE 376 Query: 558 SKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDD 598 ++VP LG +P+VG LFR+ + E K+ L++FI P ++R+ Sbjct: 377 NRVPWLGKLPVVGNLFRHQTDEHKKKELVIFITPRLVREAA 417 Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 84/250 (33%), Gaps = 12/250 (4%) Query: 4 LNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTIS 63 + ++ LL L + HA ++ F++ + ++ + + +LI P V+G +S Sbjct: 1 MPRMKVWLLLFLGLSAPLHASEQRLSLVFDDTPVENILQALADYQQTNLLIAPGVEGRLS 60 Query: 64 VRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGD 123 +R D E+ + + L SV+ + L S + + A+ Sbjct: 61 LRLEDI----EWQRALALVARLARLSVVQEEGVLLIYPESWQQWQAQKIQAEREEQQQQI 116 Query: 124 ELVTRIVPLENVPARDLAPLLRQMMDA-GSVGNVVHYEPSNVLILTGRASTINKLIEVIK 182 L + V A D A L+ G+V +N L+L + + + + Sbjct: 117 ALTQQTVTFHYANAGDAARSLQAERSLMTPRGSVTVDSRTNSLLLRDTPRALQETVRWLN 176 Query: 183 RVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIIS 242 +D+ + SA + L PA + + + + + Sbjct: 177 ALDLPLEQV-------ELSAHIVTISEEHLRELGVNWGLSPAEEVMQTLRNPQLAIPLAV 229 Query: 243 GPEKARQRIT 252 R +T Sbjct: 230 SNPAFRMGVT 239 >UniRef50_A6C2R4 Type IV pilin multimeric outer membrane protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2R4_9PLAN Length = 799 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 89/435 (20%), Positives = 179/435 (41%), Gaps = 14/435 (3%) Query: 177 LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT 236 ++++ D T QI E D+ L+ L + + K V + Sbjct: 268 VLKISPNNDSSETFSLQIQDAEIMQVLDMLGELSGLNILTGQGVTGTISANLKNVTPAQA 327 Query: 237 NSLIISGPEKARQRITSLL-------KSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVS 289 I+ + ++ + L + S + T++Y Y A L ++T + Sbjct: 328 LDAILRSRDLTSEKEGEFIYVMTQAQLELKKKSSRKVITKLYSPFYISAKELQNLITPIL 387 Query: 290 EKLKDEKGNARKPSSSGAMDNVAITAD--EQTNSLVITADQSVQEKLATVIARLDIRRAQ 347 + A D + D QT+S+++ + E++ ++ ++DI Q Sbjct: 388 TENVGIVSLTSPSEVGIAPDPTSAGGDSFAQTDSILVRDYPEILEEVDRLLEKMDIPPMQ 447 Query: 348 VLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANP 407 V++EA+I+ V + + GV +A + G N + + +G + P Sbjct: 448 VVIEAMILSVALNDDMKFGVNFAMLGGNNKNLVVDGN--GNTLNNASGFPGSGSSSIVPP 505 Query: 408 AWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVL 467 + G+ GF +GD + AL + +++A+P + L+ + A +G + Sbjct: 506 TGQFIADVAGLKYGFLHGDISGFIEALEDVTETNLIASPQLRALNKQKAELIIGDRISYS 565 Query: 468 SGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFN 527 + +Q +G+ V G L + P + + +E+ E SS + ++ L P Sbjct: 566 TVTQ--NGNTSIQNVNFLDSGIVLNLRPFITPDGQIRMEVHPERSSATINPSTNL-PDLR 622 Query: 528 TRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMV 587 T + V+V+ G TVV+GGL+++ + + ++VP LG +P++G FR + L+V Sbjct: 623 TTEVTTNVMVRDGHTVVIGGLIEERTSDTRNQVPFLGALPVIGNAFRQQREITNRTELIV 682 Query: 588 FIRPTIIRDDDVYRS 602 I P I+R + Sbjct: 683 LITPRIVRAEAALAE 697 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 22/196 (11%), Positives = 67/196 (34%), Gaps = 32/196 (16%) Query: 14 ALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQ 73 +L + +E + +A+I Q ++++G+ G IL V GTIS + Sbjct: 267 PVLKISPNNDSSETFSLQIQDAEIMQVLDMLGELSGLNILTGQGVTGTISANL-KNVTPA 325 Query: 74 EYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLE 133 + IL + + ++ + +++T++ Sbjct: 326 QALDA---ILRSRDLTSEKEGEFIYVMTQAQL----------ELKKKSSRKVITKLYSPF 372 Query: 134 NVPARDLAPLLRQMMDAG---------SVGNVVHYEP---------SNVLILTGRASTIN 175 + A++L L+ ++ S + ++ +++ + Sbjct: 373 YISAKELQNLITPILTENVGIVSLTSPSEVGIAPDPTSAGGDSFAQTDSILVRDYPEILE 432 Query: 176 KLIEVIKRVDVIGTEK 191 ++ +++++D+ + Sbjct: 433 EVDRLLEKMDIPPMQV 448 >UniRef50_Q6MPI6 Fimbrial assembly protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPI6_BDEBA Length = 726 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 107/543 (19%), Positives = 204/543 (37%), Gaps = 60/543 (11%) Query: 56 PSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIAD 115 ++G++ +F + + + G ++ + L +V S + + D Sbjct: 225 KDIKGSVGAIDAYQNPGSATARFVIQMREGLGEPMVQQEGNSLLIVASGSAPAEAMEVTD 284 Query: 116 SSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTIN 175 S + I+P +N+ G + E SN+ +N Sbjct: 285 VSTAMEDNN----ILPSQNLTEFLAGNT-------KFYGKKISIETSNM----DIRDALN 329 Query: 176 KLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKR 235 + E + +ED+ ++ + + + ++ AK + R Sbjct: 330 FITEESG--------------VNMVISEDVKGAVSLKLRQVPWDQALVVIMKAKKLGYTR 375 Query: 236 TNSLIISGPEKARQRITSLLKSLD--VEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLK 293 +++ P + + L + E R++ + YAK L + + Sbjct: 376 QGNVLRIAPLQDLKAEEDDATKLAQARKNLEPLKVRMFPVSYAKVDELEKKIKDFLG--- 432 Query: 294 DEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAI 353 D + D +TN+LV+T + E+ A +IA LD + AQV +E Sbjct: 433 ---------------DRGRVVGDVRTNALVVTDIEENLERAARLIASLDTQPAQVSIEGK 477 Query: 354 IVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFS 413 IVE ++ N+GV W+ + + P+ + G + N ++ + Sbjct: 478 IVEAKESFTRNIGVNWSATGAPIKLGSTARGPVNMNPSFNVNQSAAGSSGALNFNLNVGT 537 Query: 414 AYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTT 473 G L S + I++ P I+TL N+ A N +VPV +Q Sbjct: 538 LDIF-------GTLSAALALNESEEQVKIISAPRIMTLSNEKADINQTTEVPVRQVTQNG 590 Query: 474 SGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQ--EVSSVDSSSNSTLGPTFNTRTI 531 + T + K + KL+VTPQV +V++++ + D SS N+R Sbjct: 591 TAT--QETFQFKPLTLKLEVTPQVTADGSVIMKVLVNRQFRGADVSSAGQGAFAVNSREA 648 Query: 532 QNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRP 591 VLVK G+T V+GG+ + + VP ++P V LF+ + + K L++F+ P Sbjct: 649 NTRVLVKNGQTAVIGGIYQSDATDGEVGVPWFRELPFVSYLFKTKNISKEKSELLIFLTP 708 Query: 592 TII 594 I+ Sbjct: 709 RIM 711 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 99/331 (29%), Gaps = 27/331 (8%) Query: 13 AALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQ 72 + ++ +N DIR + + + G ++I V+G +S++ Sbjct: 300 LTEFLAGNTKFYGKKISIETSNMDIRDALNFITEESGVNMVISEDVKGAVSLKL-RQVPW 358 Query: 73 QEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPL 132 + I+ N + + L R+ P+ Sbjct: 359 DQALVV---IMKAKKLGYTRQGNVLRIAPLQDLKAEEDDATKLAQARKNLEPLKVRMFPV 415 Query: 133 ENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTE-- 190 +L ++ + G G VV +N L++T + + +I +D + Sbjct: 416 SYAKVDELEKKIKDFL--GDRGRVVGDVRTNALVVTDIEENLERAARLIASLDTQPAQVS 473 Query: 191 -------KQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISG 243 ++ +L S + G M + A + +L + Sbjct: 474 IEGKIVEAKESFTRNIGVNWSATGAPIKLGSTARGPVNMNPSFNVNQSAAGSSGALNFNL 533 Query: 244 PEKARQRITSLLKSLDVEESEEGN-----TRVYYLKYAKA----TNLVEVLTGVSEKLKD 294 +L +L + ESEE R+ L KA T V V Sbjct: 534 NVGTLDIFGTLSAALALNESEEQVKIISAPRIMTLSNEKADINQTTEVPVRQVTQNGTAT 593 Query: 295 EKGNARKPSSSGAMDNVAITADEQTNSLVIT 325 ++ KP + +TAD S+++ Sbjct: 594 QETFQFKPLTLKLEVTPQVTAD---GSVIMK 621 >UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2F0_9DELT Length = 514 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 101/393 (25%), Positives = 163/393 (41%), Gaps = 30/393 (7%) Query: 222 MPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNL 281 M + S +VA + + E R+++ L+ E TRV +++++ +L Sbjct: 148 MSIIESYGLVAVVEGGVIRVMSVEDLRRQVERQGLYLEEEHVSPLQTRVVPVRFSEPASL 207 Query: 282 VEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARL 341 E LT + + K+ ++T D T SLVI E+L + + + Sbjct: 208 AESLTPMLSRDKEGN------------PRGSVTVDRHTRSLVIRDTAENLERLTSFLQEV 255 Query: 342 DIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGG 401 D QVL+EA I+E LGVQW + G Q+ ++ A G Y+ Sbjct: 256 DQATPQVLIEAHIIETNQEVARELGVQWGSFWRGQQRVSD--------AAGGFTYQAGNP 307 Query: 402 ITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVG 461 I + A + L AL K +IL+ PS+ TLDN A G Sbjct: 308 IGEQYSLDVLTGEVGFYTASVAGNILEMQLQALQREGKVNILSRPSVATLDNHEAVLESG 367 Query: 462 QDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNST 521 +VP S ++ +V+ K +L VTPQV + + L+IE + VD + Sbjct: 368 TEVPYQ------SIEDGTTSVQYKDAVLRLLVTPQVISRENIKLKIEAQKDEVDLTRTVM 421 Query: 522 LGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERA 581 P + Q ++V+ G TVV+ GL + + VPLL +IP +G FR + Sbjct: 422 GNPFIIKKLAQTNLIVEDGSTVVIAGLAKERQASSSTGVPLLKNIPGLGVFFRSDARAGE 481 Query: 582 KRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQE 614 L++FI P I+ +L Y + R+ Sbjct: 482 FEELLIFITPRILS----ADNLENRDYGQLREL 510 Score = 99.0 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 9/169 (5%) Query: 27 QYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLY 86 N + I + + + + I+I+PSV G +++ F+SI++ Y Sbjct: 99 PTSINLVDVPIGTAMRSLARVAQQNIIINPSVTGNVNIHVEQ-VPWN---DVFMSIIESY 154 Query: 87 GYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQ 146 G + ++V+ +++ L TR+VP+ LA L Sbjct: 155 GLVAVVEGG-VIRVMSVEDLRRQVERQGLYLEEEHVSPLQTRVVPVRFSEPASLAESLTP 213 Query: 147 MMDAGS----VGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEK 191 M+ G+V + L++ A + +L ++ VD + Sbjct: 214 MLSRDKEGNPRGSVTVDRHTRSLVIRDTAENLERLTSFLQEVDQATPQV 262 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.308 0.135 0.338 Lambda K H 0.267 0.0412 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,175,423,273 Number of Sequences: 3077464 Number of extensions: 142089984 Number of successful extensions: 464043 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2273 Number of HSP's successfully gapped in prelim test: 490 Number of HSP's that attempted gapping in prelim test: 449379 Number of HSP's gapped (non-prelim): 5436 length of query: 650 length of database: 1,040,396,356 effective HSP length: 135 effective length of query: 515 effective length of database: 624,938,716 effective search space: 321843438740 effective search space used: 321843438740 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 96 (41.6 bits)