BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (144 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P10032 Protein psiB n=79 Tax=root RepID=PSIB2_ECOLX 288 5e-77 UniRef50_D2WFG1 Plasmid SOS inhibition protein B n=3 Tax=Escheri... 138 6e-32 UniRef50_A4WGR1 Putative uncharacterized protein n=2 Tax=Enterob... 97 2e-19 UniRef50_A7M7G3 PsiB n=2 Tax=Serratia RepID=A7M7G3_9ENTR 57 1e-07 UniRef50_Q4L1R9 Plasmid SOS inhibitor protein n=1 Tax=Salmonella... 50 3e-05 >UniRef50_P10032 Protein psiB n=79 Tax=root RepID=PSIB2_ECOLX Length = 144 Score = 288 bits (736), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 138/143 (96%), Positives = 140/143 (97%) Query: 1 MKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF 60 MKTELTLNVLQTM+AQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF Sbjct: 1 MKTELTLNVLQTMSAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF 60 Query: 61 PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALA 120 PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFA EAVSHSLALA Sbjct: 61 PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALA 120 Query: 121 ASLDTQGYSVNDIIHISMAEGGQ 143 ASLD QGYSV+DIIHI MAEGGQ Sbjct: 121 ASLDAQGYSVSDIIHILMAEGGQ 143 >UniRef50_D2WFG1 Plasmid SOS inhibition protein B n=3 Tax=Escherichia coli RepID=D2WFG1_ECOLX Length = 160 Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 67/91 (73%), Positives = 74/91 (81%), Gaps = 8/91 (8%) Query: 53 GSEFGGFFPVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEA 112 G+E G FTPAHERFHLALCSPGDVSQ+W+LVLVN GG+PFAVVQVQ F A Sbjct: 77 GAELG--------FTPAHERFHLALCSPGDVSQLWMLVLVNCGGQPFAVVQVQHIFTPVA 128 Query: 113 VSHSLALAASLDTQGYSVNDIIHISMAEGGQ 143 +SH+LALAA+LD QGYSVNDIIHI MAEGGQ Sbjct: 129 ISHTLALAATLDAQGYSVNDIIHILMAEGGQ 159 >UniRef50_A4WGR1 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A4WGR1_ENT38 Length = 144 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 1/124 (0%) Query: 1 MKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF 60 M + L + T+ A + E IR G D RR L+ AV L P+ W + EY SEFGGFF Sbjct: 1 MTMKYDLTRINTLTASDMEFIRQQGEDARRALSDAVTGLLTTPEGWRVCAEYRSEFGGFF 60 Query: 61 PVQVRFTP-AHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLAL 119 PVQ RF+ + +HL +CSPG++S W+LVL+++GGE + E VS +A Sbjct: 61 PVQCRFSADGCDDWHLCVCSPGELSPYWLLVLLSSGGEVVRTLYQNDTLQPEQVSQLIAQ 120 Query: 120 AASL 123 A + Sbjct: 121 MAGM 124 >UniRef50_A7M7G3 PsiB n=2 Tax=Serratia RepID=A7M7G3_9ENTR Length = 154 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 8/147 (5%) Query: 4 ELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQ 63 +L+L + M+A E E+ R G RR L +AV+ L P W N E EF G PV Sbjct: 5 KLSLEQITGMSATELEEYRDRGRAWRRMLNNAVLGALALPKGWVANAEDVCEFCGQVPVV 64 Query: 64 VRFTP-AHERFHLALCSPGDVSQVWVLVLVNAG-------GEPFAVVQVQRRFASEAVSH 115 R +P + + LCS G W VL G G+ A V F E ++ Sbjct: 65 CRISPKGDDATAIFLCSAGADVPGWSAVLPYQGTSLTANQGDCIAWVHTADNFEPETINR 124 Query: 116 SLALAASLDTQGYSVNDIIHISMAEGG 142 L + G++ + + +++ GG Sbjct: 125 VLNVVGEYYRHGFTQPEKLAVALRMGG 151 >UniRef50_Q4L1R9 Plasmid SOS inhibitor protein n=1 Tax=Salmonella enterica RepID=Q4L1R9_SALCH Length = 63 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/43 (55%), Positives = 28/43 (65%) Query: 1 MKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAP 43 M+ +T VL TM QE+ED R G D RRELTHA MR+L P Sbjct: 2 MRNIITPAVLSTMIPQEFEDWRDGGEDLRRELTHAAMRDLTCP 44 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P10032 Protein psiB n=79 Tax=root RepID=PSIB2_ECOLX 244 7e-64 UniRef50_A7M7G3 PsiB n=2 Tax=Serratia RepID=A7M7G3_9ENTR 207 9e-53 UniRef50_A4WGR1 Putative uncharacterized protein n=2 Tax=Enterob... 191 5e-48 UniRef50_D2WFG1 Plasmid SOS inhibition protein B n=3 Tax=Escheri... 136 2e-31 UniRef50_Q4L1R9 Plasmid SOS inhibitor protein n=1 Tax=Salmonella... 73 3e-12 Sequences not found previously or not previously below threshold: UniRef50_Q8KTS2 Methylenetetrahydrofolate reductase n=1 Tax=Cand... 44 0.001 >UniRef50_P10032 Protein psiB n=79 Tax=root RepID=PSIB2_ECOLX Length = 144 Score = 244 bits (622), Expect = 7e-64, Method: Composition-based stats. Identities = 138/143 (96%), Positives = 140/143 (97%) Query: 1 MKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF 60 MKTELTLNVLQTM+AQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF Sbjct: 1 MKTELTLNVLQTMSAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF 60 Query: 61 PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALA 120 PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFA EAVSHSLALA Sbjct: 61 PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALA 120 Query: 121 ASLDTQGYSVNDIIHISMAEGGQ 143 ASLD QGYSV+DIIHI MAEGGQ Sbjct: 121 ASLDAQGYSVSDIIHILMAEGGQ 143 >UniRef50_A7M7G3 PsiB n=2 Tax=Serratia RepID=A7M7G3_9ENTR Length = 154 Score = 207 bits (526), Expect = 9e-53, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 9/151 (5%) Query: 1 MKT-ELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGF 59 MK +L+L + M+A E E+ R G RR L +AV+ L P W N E EF G Sbjct: 1 MKNQKLSLEQITGMSATELEEYRDRGRAWRRMLNNAVLGALALPKGWVANAEDVCEFCGQ 60 Query: 60 FPVQVRFTP-AHERFHLALCSPGDVSQVWVLVLVNAG-------GEPFAVVQVQRRFASE 111 PV R +P + + LCS G W VL G G+ A V F E Sbjct: 61 VPVVCRISPKGDDATAIFLCSAGADVPGWSAVLPYQGTSLTANQGDCIAWVHTADNFEPE 120 Query: 112 AVSHSLALAASLDTQGYSVNDIIHISMAEGG 142 ++ L + G++ + + +++ GG Sbjct: 121 TINRVLNVVGEYYRHGFTQPEKLAVALRMGG 151 >UniRef50_A4WGR1 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A4WGR1_ENT38 Length = 144 Score = 191 bits (486), Expect = 5e-48, Method: Composition-based stats. Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Query: 1 MKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF 60 M + L + T+ A + E IR G D RR L+ AV L P+ W + EY SEFGGFF Sbjct: 1 MTMKYDLTRINTLTASDMEFIRQQGEDARRALSDAVTGLLTTPEGWRVCAEYRSEFGGFF 60 Query: 61 PVQVRFTP-AHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLAL 119 PVQ RF+ + +HL +CSPG++S W+LVL+++GGE + E VS +A Sbjct: 61 PVQCRFSADGCDDWHLCVCSPGELSPYWLLVLLSSGGEVVRTLYQNDTLQPEQVSQLIAQ 120 Query: 120 AASLDT 125 A + Sbjct: 121 MAGMRR 126 >UniRef50_D2WFG1 Plasmid SOS inhibition protein B n=3 Tax=Escherichia coli RepID=D2WFG1_ECOLX Length = 160 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 64/78 (82%), Positives = 70/78 (89%) Query: 66 FTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDT 125 FTPAHERFHLALCSPGDVSQ+W+LVLVN GG+PFAVVQVQ F A+SH+LALAA+LD Sbjct: 82 FTPAHERFHLALCSPGDVSQLWMLVLVNCGGQPFAVVQVQHIFTPVAISHTLALAATLDA 141 Query: 126 QGYSVNDIIHISMAEGGQ 143 QGYSVNDIIHI MAEGGQ Sbjct: 142 QGYSVNDIIHILMAEGGQ 159 >UniRef50_Q4L1R9 Plasmid SOS inhibitor protein n=1 Tax=Salmonella enterica RepID=Q4L1R9_SALCH Length = 63 Score = 72.9 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 24/43 (55%), Positives = 28/43 (65%) Query: 1 MKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAP 43 M+ +T VL TM QE+ED R G D RRELTHA MR+L P Sbjct: 2 MRNIITPAVLSTMIPQEFEDWRDGGEDLRRELTHAAMRDLTCP 44 >UniRef50_Q8KTS2 Methylenetetrahydrofolate reductase n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTS2_TREPR Length = 300 Score = 44.4 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 2/126 (1%) Query: 13 MNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTP--AH 70 M++ +ED+RA R A+ + PD + + G PV P +H Sbjct: 156 MSSTIFEDVRALARKVRCGANSAITQCFYNPDAYYRLQDELQRLGVSLPVTPGIMPVLSH 215 Query: 71 ERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSV 130 + + G W+L + A A V + ++ SLA + D Y++ Sbjct: 216 DYMSRFILPSGVDVPAWILKRLEALRYCSASVLEFGTDVALSLCESLAARGASDFHLYTM 275 Query: 131 NDIIHI 136 ND + Sbjct: 276 NDHRAV 281 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P10032 Protein psiB n=79 Tax=root RepID=PSIB2_ECOLX 216 2e-55 UniRef50_A7M7G3 PsiB n=2 Tax=Serratia RepID=A7M7G3_9ENTR 185 3e-46 UniRef50_A4WGR1 Putative uncharacterized protein n=2 Tax=Enterob... 172 2e-42 UniRef50_Q8KTS2 Methylenetetrahydrofolate reductase n=1 Tax=Cand... 155 3e-37 UniRef50_D2WFG1 Plasmid SOS inhibition protein B n=3 Tax=Escheri... 118 5e-26 UniRef50_Q4L1R9 Plasmid SOS inhibitor protein n=1 Tax=Salmonella... 65 8e-10 Sequences not found previously or not previously below threshold: UniRef50_Q21NJ7 Methylenetetrahydrofolate reductase n=2 Tax=Gamm... 63 3e-09 UniRef50_A5EYC8 Methylenetetrahydrofolate reductase n=2 Tax=Card... 62 7e-09 UniRef50_A1WXM6 Methylenetetrahydrofolate reductase n=221 Tax=Ba... 56 4e-07 UniRef50_A8PLM8 Methylenetetrahydrofolate reductase n=1 Tax=Rick... 52 4e-06 UniRef50_C6NUC2 Methylenetetrahydrofolate reductase n=1 Tax=Acid... 48 9e-05 UniRef50_A0LTK4 Methylenetetrahydrofolate reductase n=19 Tax=Act... 47 2e-04 UniRef50_Q3SVZ0 Methylenetetrahydrofolate reductase n=69 Tax=Pro... 44 0.001 UniRef50_B7VLL7 Methylenetetrahydrofolate reductase n=16 Tax=Pro... 43 0.003 UniRef50_B2IJ01 Methylenetetrahydrofolate reductase n=5 Tax=Alph... 42 0.004 UniRef50_D1BI58 Methylenetetrahydrofolate reductase n=2 Tax=Micr... 42 0.006 UniRef50_B9Z0I7 Methylenetetrahydrofolate reductase n=1 Tax=Luti... 41 0.009 UniRef50_A3H552 Methylenetetrahydrofolate reductase (Fragment) n... 40 0.020 >UniRef50_P10032 Protein psiB n=79 Tax=root RepID=PSIB2_ECOLX Length = 144 Score = 216 bits (549), Expect = 2e-55, Method: Composition-based stats. Identities = 138/143 (96%), Positives = 140/143 (97%) Query: 1 MKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF 60 MKTELTLNVLQTM+AQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF Sbjct: 1 MKTELTLNVLQTMSAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF 60 Query: 61 PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALA 120 PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFA EAVSHSLALA Sbjct: 61 PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALA 120 Query: 121 ASLDTQGYSVNDIIHISMAEGGQ 143 ASLD QGYSV+DIIHI MAEGGQ Sbjct: 121 ASLDAQGYSVSDIIHILMAEGGQ 143 >UniRef50_A7M7G3 PsiB n=2 Tax=Serratia RepID=A7M7G3_9ENTR Length = 154 Score = 185 bits (470), Expect = 3e-46, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 9/151 (5%) Query: 1 MKT-ELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGF 59 MK +L+L + M+A E E+ R G RR L +AV+ L P W N E EF G Sbjct: 1 MKNQKLSLEQITGMSATELEEYRDRGRAWRRMLNNAVLGALALPKGWVANAEDVCEFCGQ 60 Query: 60 FPVQVRFTP-AHERFHLALCSPGDVSQVWVLVLVNAG-------GEPFAVVQVQRRFASE 111 PV R +P + + LCS G W VL G G+ A V F E Sbjct: 61 VPVVCRISPKGDDATAIFLCSAGADVPGWSAVLPYQGTSLTANQGDCIAWVHTADNFEPE 120 Query: 112 AVSHSLALAASLDTQGYSVNDIIHISMAEGG 142 ++ L + G++ + + +++ GG Sbjct: 121 TINRVLNVVGEYYRHGFTQPEKLAVALRMGG 151 >UniRef50_A4WGR1 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A4WGR1_ENT38 Length = 144 Score = 172 bits (436), Expect = 2e-42, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 4/145 (2%) Query: 1 MKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF 60 M + L + T+ A + E IR G D RR L+ AV L P+ W + EY SEFGGFF Sbjct: 1 MTMKYDLTRINTLTASDMEFIRQQGEDARRALSDAVTGLLTTPEGWRVCAEYRSEFGGFF 60 Query: 61 PVQVRFTP-AHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLAL 119 PVQ RF+ + +HL +CSPG++S W+LVL+++GGE + E VS +A Sbjct: 61 PVQCRFSADGCDDWHLCVCSPGELSPYWLLVLLSSGGEVVRTLYQNDTLQPEQVSQLIAQ 120 Query: 120 AASLDTQGYSVNDIIHISMAEGGQV 144 A + + ++ G+V Sbjct: 121 MAGMRRFNCTA---RTVATLMSGEV 142 >UniRef50_Q8KTS2 Methylenetetrahydrofolate reductase n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTS2_TREPR Length = 300 Score = 155 bits (392), Expect = 3e-37, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 2/126 (1%) Query: 13 MNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTP--AH 70 M++ +ED+RA R A+ + PD + + G PV P +H Sbjct: 156 MSSTIFEDVRALARKVRCGANSAITQCFYNPDAYYRLQDELQRLGVSLPVTPGIMPVLSH 215 Query: 71 ERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSV 130 + + G W+L + A A V + ++ SLA + D Y++ Sbjct: 216 DYMSRFILPSGVDVPAWILKRLEALRYCSASVLEFGTDVALSLCESLAARGASDFHLYTM 275 Query: 131 NDIIHI 136 ND + Sbjct: 276 NDHRAV 281 >UniRef50_D2WFG1 Plasmid SOS inhibition protein B n=3 Tax=Escherichia coli RepID=D2WFG1_ECOLX Length = 160 Score = 118 bits (296), Expect = 5e-26, Method: Composition-based stats. Identities = 64/79 (81%), Positives = 70/79 (88%) Query: 65 RFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLD 124 FTPAHERFHLALCSPGDVSQ+W+LVLVN GG+PFAVVQVQ F A+SH+LALAA+LD Sbjct: 81 GFTPAHERFHLALCSPGDVSQLWMLVLVNCGGQPFAVVQVQHIFTPVAISHTLALAATLD 140 Query: 125 TQGYSVNDIIHISMAEGGQ 143 QGYSVNDIIHI MAEGGQ Sbjct: 141 AQGYSVNDIIHILMAEGGQ 159 >UniRef50_Q4L1R9 Plasmid SOS inhibitor protein n=1 Tax=Salmonella enterica RepID=Q4L1R9_SALCH Length = 63 Score = 64.8 bits (156), Expect = 8e-10, Method: Composition-based stats. Identities = 24/45 (53%), Positives = 28/45 (62%) Query: 1 MKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDN 45 M+ +T VL TM QE+ED R G D RRELTHA MR+L P Sbjct: 2 MRNIITPAVLSTMIPQEFEDWRDGGEDLRRELTHAAMRDLTCPAA 46 >UniRef50_Q21NJ7 Methylenetetrahydrofolate reductase n=2 Tax=Gammaproteobacteria RepID=Q21NJ7_SACD2 Length = 297 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 34/121 (28%), Gaps = 2/121 (1%) Query: 14 NAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHER- 72 +D+R A+ + PD + + + G P+ P Sbjct: 146 ATSYLDDVRYLKGKFDAGANSAITQYFFNPDAYFYFMDQCQKEGIDQPIYPGIMPILNYR 205 Query: 73 -FHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVN 131 S G W+ + + G+ + + +L A + Y++N Sbjct: 206 NLARFSDSCGADIPRWMRKRMESFGDNQEALISFGIDWISELCDTLLDAGAPGLHFYTMN 265 Query: 132 D 132 Sbjct: 266 Q 266 >UniRef50_A5EYC8 Methylenetetrahydrofolate reductase n=2 Tax=Cardiobacteriaceae RepID=A5EYC8_DICNV Length = 293 Score = 61.7 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 33/121 (27%), Gaps = 5/121 (4%) Query: 26 SDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHERFHLALCSP--GDV 83 AV + D + + + G P+ P LA S G Sbjct: 169 EKCAAGANEAVTQYFFNGDAYLRFRDDVVKMGVSIPIVPGIMPITNYVRLARFSDNCGTE 228 Query: 84 SQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVND---IIHISMAE 140 W+ + + E A + + L Y++N +I I+ Sbjct: 229 IPRWIRTRLESYQEDSASLLDFGADVVSQLCQRLVSEGVPGLHFYTMNRADALIEIAKRL 288 Query: 141 G 141 G Sbjct: 289 G 289 >UniRef50_A1WXM6 Methylenetetrahydrofolate reductase n=221 Tax=Bacteria RepID=A1WXM6_HALHL Length = 304 Score = 55.9 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 29/120 (24%), Gaps = 2/120 (1%) Query: 14 NAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTP--AHE 71 DI + A+ + D + E + G P+ P E Sbjct: 151 APDALTDIENFVRKAKAGADSAITQFFYNADCYYRFVEDCEKRGVDIPIVPGIMPLMNFE 210 Query: 72 RFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVN 131 + + W+ + A + + L + Y++N Sbjct: 211 QQARFAAACKADMPRWLAQRMEAWKDDPQSRMEYGIDVVTRLCEDLLDNGAPGIHFYALN 270 >UniRef50_A8PLM8 Methylenetetrahydrofolate reductase n=1 Tax=Rickettsiella grylli RepID=A8PLM8_9COXI Length = 281 Score = 52.4 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 30/115 (26%), Gaps = 2/115 (1%) Query: 19 EDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHERFHL--A 76 +DI A+ + D + E + P+ TP L Sbjct: 151 KDIENFKRKIEAGANSAITQFFFNSDAYFRFIEACEKASIHIPIVPGITPIINYQKLIQF 210 Query: 77 LCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVN 131 + G +W+ + +Q + L + Y++N Sbjct: 211 STACGAEIPLWLRKHLAMLSNDPQSLQEVGIEFVTKLCQHLLQNGVKEFHFYTLN 265 >UniRef50_C6NUC2 Methylenetetrahydrofolate reductase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUC2_9GAMM Length = 276 Score = 48.2 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 31/120 (25%), Gaps = 2/120 (1%) Query: 20 DIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHERFHLALCS 79 D+ + + + PD + + + G P+ V P +A S Sbjct: 149 DLEYLQRKVEAGASGLITQYFYNPDAYLQLRDDLARRGVDVPITVGVMPMTNYAQIANFS 208 Query: 80 P--GDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVNDIIHIS 137 G ++ + + + + L + Y++N Sbjct: 209 AQCGAEIPQFLRRRMESFADDPGAQAELAIEVASRQCRLLLDQGAPGLHFYTLNQAEATL 268 >UniRef50_A0LTK4 Methylenetetrahydrofolate reductase n=19 Tax=Actinomycetales RepID=A0LTK4_ACIC1 Length = 331 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 35/120 (29%), Gaps = 2/120 (1%) Query: 14 NAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTP--AHE 71 + +D R R A+ + +++ E G P+ P + Sbjct: 168 SPTLEDDTRYFVEKCRAGADFAITQMFFRVEDYLRLRERIERAGCTVPIIPGVMPITSIG 227 Query: 72 RFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVN 131 + GD + + A + A V+ + + L + Y++N Sbjct: 228 QIERFALLSGDEFPPELADRILAVADQPAAVRAIGIEVATEMCRRLLDEGAPGLHFYTLN 287 >UniRef50_Q3SVZ0 Methylenetetrahydrofolate reductase n=69 Tax=Proteobacteria RepID=Q3SVZ0_NITWN Length = 343 Score = 44.4 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 32/121 (26%), Gaps = 4/121 (3%) Query: 14 NAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHERF 73 + DI + T A+ + + + + G P+ P H Sbjct: 201 SPDIDTDIDVLKAKVDAGATRAITQVFFDNNLYLRYLDRVRARGIDIPIVPGIMPMHNFK 260 Query: 74 H--LALCSPGDVSQVWVLVLVNAGGE-PFAVVQVQRRFASEAVSHSLALAASLDTQGYSV 130 + G W+ E P + A+ V LA Y++ Sbjct: 261 QARAFVTKAGTTVPAWLAEKFEGLDEDPETRKLIAATVAAGQV-QKLAKRGVDTFHFYTM 319 Query: 131 N 131 N Sbjct: 320 N 320 >UniRef50_B7VLL7 Methylenetetrahydrofolate reductase n=16 Tax=Proteobacteria RepID=B7VLL7_VIBSL Length = 337 Score = 42.8 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 10/114 (8%), Positives = 27/114 (23%), Gaps = 2/114 (1%) Query: 20 DIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHER--FHLAL 77 D+ A+ + +++ + G + P Sbjct: 203 DLINLKRKVDAGANRAITQFFFDVESYLRFRDRCVAAGVDVEIVPGILPVSNFKQASRFA 262 Query: 78 CSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVN 131 W+ + Q+ + + +L+ D Y++N Sbjct: 263 AMNNVKVPGWMAKQFEGLDDDPTTRQLVGASQAIDMVRTLSREGVKDFHFYTLN 316 >UniRef50_B2IJ01 Methylenetetrahydrofolate reductase n=5 Tax=Alphaproteobacteria RepID=B2IJ01_BEII9 Length = 309 Score = 42.4 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 33/121 (27%), Gaps = 4/121 (3%) Query: 14 NAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHE-- 71 +A D+ + T A+ + D + + G P+ P Sbjct: 167 SASIESDLDVLQAKIDAGATRAITQFFFENDTYLRYLDKVRARGITIPILPGIVPVQNFK 226 Query: 72 RFHLALCSPGDVSQVWVLVLVNAG-GEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSV 130 + G W+ +P + A+E V + D Y++ Sbjct: 227 QTANFAKKAGASIPPWLAERFEGLDDDPQTRRLIAATVAAEQVLDLVD-RGVRDFHFYTM 285 Query: 131 N 131 N Sbjct: 286 N 286 >UniRef50_D1BI58 Methylenetetrahydrofolate reductase n=2 Tax=Micrococcineae RepID=D1BI58_SANKS Length = 354 Score = 42.0 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 39/125 (31%), Gaps = 3/125 (2%) Query: 15 AQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHE--R 72 ++++ ++ A+ + D++ + G P+ P + R Sbjct: 191 TTRSQEVQRLLEKQQAGADFAITQLFYDADSYVGFVDEARRAGVTLPILAGLLPMTDPAR 250 Query: 73 FHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVND 132 G + ++ + + +P A AS ++ ++ A + Y+ N Sbjct: 251 LARVETLTGVPAPKALVRDLESLTDPAAR-HAHGIRASVELAEAVLAAGAPGLHIYTFNK 309 Query: 133 IIHIS 137 Sbjct: 310 HEAAL 314 >UniRef50_B9Z0I7 Methylenetetrahydrofolate reductase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0I7_9NEIS Length = 287 Score = 41.3 bits (95), Expect = 0.009, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 33/119 (27%), Gaps = 2/119 (1%) Query: 20 DIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHERFHLA--L 77 D+ A + AV + D + + G P+ P A Sbjct: 148 DLAALRVKQEAGANAAVTQYFFNTDAFLYLRDSCHAAGITLPLVPGVLPLTRFRSTAQRA 207 Query: 78 CSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVNDIIHI 136 + G W+ + + + A V+ + L +S+N I I Sbjct: 208 EARGIEMPRWIYRKMESLADDTAAVRAFGLDVTARQCERLIAEGVPALHFFSLNQIDAI 266 >UniRef50_A3H552 Methylenetetrahydrofolate reductase (Fragment) n=2 Tax=Vibrio cholerae RepID=A3H552_VIBCH Length = 208 Score = 40.1 bits (92), Expect = 0.020, Method: Composition-based stats. Identities = 10/114 (8%), Positives = 26/114 (22%), Gaps = 2/114 (1%) Query: 20 DIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHER--FHLAL 77 D+ A+ + +++ + G + P Sbjct: 77 DLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVAAGIDVEIVPGILPVSNFKQASRFA 136 Query: 78 CSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFASEAVSHSLALAASLDTQGYSVN 131 W++ + Q+ + + L D Y++N Sbjct: 137 AQNNVKVPNWMVKQFEGLEDDPVTRQLVGASQAIDMVRVLCREGVKDFHFYTLN 190 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.127 0.336 Lambda K H 0.267 0.0386 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 707,715,898 Number of Sequences: 3077464 Number of extensions: 23685399 Number of successful extensions: 60986 Number of sequences better than 1.0e-01: 19 Number of HSP's better than 0.1 without gapping: 18 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 60954 Number of HSP's gapped (non-prelim): 31 length of query: 144 length of database: 1,040,396,356 effective HSP length: 108 effective length of query: 36 effective length of database: 708,030,244 effective search space: 25489088784 effective search space used: 25489088784 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 87 (38.2 bits)