BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (280 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Ta... 578 e-164 UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae... 514 e-144 UniRef50_C4X747 Negative transcriptional regulator of cel operon... 479 e-134 UniRef50_C6D149 Transcriptional regulator, AraC family n=1 Tax=P... 94 4e-18 UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus ... 87 8e-16 UniRef50_Q28QP5 Transcriptional regulator, AraC family n=1 Tax=J... 87 9e-16 UniRef50_D1N7W9 Transcriptional regulator, AraC family n=1 Tax=V... 86 2e-15 UniRef50_B1ZSX4 Transcriptional regulator, AraC family n=1 Tax=O... 85 3e-15 UniRef50_C0CUZ1 Putative uncharacterized protein n=1 Tax=Clostri... 83 9e-15 UniRef50_C6D720 Transcriptional regulator, AraC family n=2 Tax=B... 82 3e-14 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 79 2e-13 UniRef50_D1N6W7 Transcriptional regulator, AraC family n=1 Tax=V... 78 4e-13 UniRef50_C6J044 Transcriptional regulator n=1 Tax=Paenibacillus ... 76 1e-12 UniRef50_C5EKJ0 Predicted protein n=1 Tax=Clostridiales bacteriu... 76 1e-12 UniRef50_C0E9Q1 Putative uncharacterized protein n=1 Tax=Clostri... 76 2e-12 UniRef50_A3V1A1 Transcriptional regulator n=2 Tax=Rhodobacterace... 75 3e-12 UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostri... 75 4e-12 UniRef50_A8RPB8 Putative uncharacterized protein n=1 Tax=Clostri... 74 5e-12 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 74 6e-12 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 72 2e-11 UniRef50_C6LBG3 Transcriptional regulator, AraC/XylS family n=2 ... 72 3e-11 UniRef50_C6J2X2 Predicted protein n=1 Tax=Paenibacillus sp. oral... 72 3e-11 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 72 3e-11 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 71 3e-11 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 71 3e-11 UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaeros... 71 4e-11 UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 T... 70 7e-11 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 70 8e-11 UniRef50_C6IIU9 Transcriptional regulator n=2 Tax=Bacteroides Re... 70 9e-11 UniRef50_B7I0Q9 Transcriptional regulator, AraC family protein n... 70 1e-10 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 69 2e-10 UniRef50_C7PAR8 Transcriptional regulator, AraC family n=1 Tax=C... 68 3e-10 UniRef50_A4EK09 Transcriptional regulator, AraC family protein n... 68 3e-10 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 68 4e-10 UniRef50_Q8EL34 Hypothetical conserved protein n=1 Tax=Oceanobac... 67 5e-10 UniRef50_C6W159 Transcriptional regulator, AraC family n=1 Tax=D... 67 6e-10 UniRef50_C0Z7V8 Probable transcriptional regulator n=1 Tax=Brevi... 67 6e-10 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 67 7e-10 UniRef50_C6W763 Transcriptional regulator, AraC family n=1 Tax=D... 67 8e-10 UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostri... 67 9e-10 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 67 9e-10 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 66 1e-09 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 66 2e-09 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 65 2e-09 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 65 2e-09 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 65 2e-09 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 65 2e-09 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 65 2e-09 UniRef50_D2MNX8 Transcriptional regulator, AraC family n=1 Tax=B... 65 2e-09 UniRef50_Q0TRX2 DNA-bindng response regulator, AraC family n=12 ... 65 3e-09 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 65 3e-09 UniRef50_Q485B0 Transcriptional regulator, araC family n=1 Tax=C... 65 3e-09 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 65 3e-09 UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostri... 64 4e-09 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 64 4e-09 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 64 5e-09 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 64 5e-09 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 64 6e-09 UniRef50_C8ZX65 Transcriptional regulator n=1 Tax=Enterococcus g... 64 7e-09 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 64 7e-09 UniRef50_UPI0001788EB0 transcriptional regulator, AraC family n=... 64 7e-09 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 64 8e-09 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 64 8e-09 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 64 8e-09 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 63 9e-09 UniRef50_UPI00019047EB transcriptional regulator n=1 Tax=Rhizobi... 63 9e-09 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 63 1e-08 UniRef50_C1D3S3 Putative transcriptional regulator, AraC family ... 63 1e-08 UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing... 63 1e-08 UniRef50_B6VMW0 Similar to arac-family transcriptional regulator... 63 1e-08 UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=G... 63 1e-08 UniRef50_A7B562 Putative uncharacterized protein n=2 Tax=Clostri... 63 1e-08 UniRef50_Q39TN8 Two component transcriptional regulator, AraC fa... 62 1e-08 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 62 2e-08 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 62 2e-08 UniRef50_D1T9I8 AraC family transcriptional regulator n=1 Tax=Bu... 62 2e-08 UniRef50_C6PNM8 Transcriptional regulator, AraC family n=1 Tax=C... 62 2e-08 UniRef50_Q9KBY8 Transcriptional regulator (AraC/XylS family) n=1... 62 3e-08 UniRef50_A4A7R1 AraC-family transcriptional regulator n=2 Tax=un... 62 3e-08 UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D2... 62 3e-08 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 62 3e-08 UniRef50_Q2CI77 Transcriptional regulator n=4 Tax=Rhodobacterace... 62 3e-08 UniRef50_UPI0001C37EF8 AraC family transcriptional regulator n=1... 61 3e-08 UniRef50_C7PIS8 Transcriptional regulator, AraC family n=1 Tax=C... 61 3e-08 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 61 4e-08 UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1... 61 4e-08 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 61 4e-08 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 61 4e-08 UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostri... 61 4e-08 UniRef50_A8GCV2 Transcriptional regulator, AraC family n=18 Tax=... 61 5e-08 UniRef50_B1MLH4 Probable transcriptional regulator, AraC family ... 61 5e-08 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 61 5e-08 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 61 5e-08 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 61 5e-08 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 60 6e-08 UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulator... 60 6e-08 UniRef50_Q21KB5 Transcriptional regulator, AraC family with amid... 60 6e-08 UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=V... 60 6e-08 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 60 7e-08 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 60 7e-08 UniRef50_C7PA24 Transcriptional regulator, AraC family n=1 Tax=C... 60 8e-08 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 60 8e-08 UniRef50_C8NDY5 AraC family DNA-binding response regulator n=1 T... 60 8e-08 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 60 8e-08 UniRef50_D1CGI0 Transcriptional regulator, AraC family n=1 Tax=T... 60 9e-08 UniRef50_UPI000178960C transcriptional regulator, AraC family n=... 60 9e-08 UniRef50_C6CRE4 Transcriptional regulator, AraC family n=2 Tax=B... 60 9e-08 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 60 1e-07 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 60 1e-07 UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re... 60 1e-07 UniRef50_B1MCK7 Putative transcription regulator, AraC family n=... 60 1e-07 UniRef50_Q4A0B7 Putative transcriptional regulator n=1 Tax=Staph... 60 1e-07 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 59 1e-07 UniRef50_B0MSM8 Putative uncharacterized protein n=1 Tax=Alistip... 59 1e-07 UniRef50_C3HF38 Putative uncharacterized protein n=1 Tax=Bacillu... 59 1e-07 UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=... 59 1e-07 UniRef50_B0A8H8 Putative uncharacterized protein n=1 Tax=Clostri... 59 1e-07 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 59 1e-07 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 59 1e-07 UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=P... 59 2e-07 UniRef50_C0EDI9 Putative uncharacterized protein n=1 Tax=Clostri... 59 2e-07 UniRef50_Q11HY1 Transcriptional regulator, AraC family with amid... 59 2e-07 UniRef50_UPI000174610C response regulator receiver domain protei... 59 2e-07 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 59 2e-07 UniRef50_UPI0001C365A9 transcriptional regulator, AraC family pr... 59 2e-07 UniRef50_A7LYG4 Sensor protein n=7 Tax=Bacteroides RepID=A7LYG4_... 59 2e-07 UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecali... 59 2e-07 UniRef50_B9QTE2 DJ-1/PfpI family n=1 Tax=Labrenzia alexandrii DF... 59 2e-07 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 59 2e-07 UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostri... 59 2e-07 UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi... 59 2e-07 UniRef50_Q0C558 Transcriptional regulator, AraC family n=1 Tax=H... 59 2e-07 UniRef50_C6JCM1 Putative uncharacterized protein n=1 Tax=Ruminoc... 59 2e-07 UniRef50_A6DJ96 Arabinose operon regulatory protein n=1 Tax=Lent... 59 2e-07 UniRef50_Q5WL40 AraC/XylS family transcriptional regulator n=1 T... 59 3e-07 UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=C... 59 3e-07 UniRef50_C6XVV2 Helix-turn-helix-domain containing protein AraC ... 59 3e-07 UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=C... 59 3e-07 UniRef50_C0A382 AraC-type DNA-binding domain-containing protein-... 58 3e-07 UniRef50_Q93PA7 MS124, putative transcriptional activator n=1 Ta... 58 3e-07 UniRef50_D1PCF3 Putative two-component system sensor histidine k... 58 3e-07 UniRef50_A5V4G1 Transcriptional regulator, AraC family n=1 Tax=S... 58 3e-07 UniRef50_C6CFY9 Transcriptional regulator, AraC family n=4 Tax=D... 58 3e-07 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 58 3e-07 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 58 3e-07 UniRef50_UPI000178A007 transcriptional regulator, AraC family n=... 58 3e-07 UniRef50_UPI00017450D3 transcriptional regulator, AraC family pr... 58 3e-07 UniRef50_A1KC76 Putative AraC family transcriptional regulator n... 58 3e-07 UniRef50_B8DF67 Methylphosphotriester-DNA alkyltransferase n=19 ... 58 4e-07 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 58 4e-07 UniRef50_C2GWE4 AraC/XylS family transcriptional regulator n=4 T... 58 4e-07 UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostri... 58 4e-07 UniRef50_B8FFF2 Transcriptional regulator, AraC family n=2 Tax=D... 57 5e-07 UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alka... 57 5e-07 UniRef50_A1S8K4 Transcriptional regulator, AraC family with amid... 57 5e-07 UniRef50_C3JXK6 AraC-family transcriptional regulator n=3 Tax=Ga... 57 5e-07 UniRef50_C7IE87 Transcriptional regulator, AraC family n=1 Tax=C... 57 5e-07 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 57 5e-07 UniRef50_C6D1M1 Transcriptional regulator, AraC family n=2 Tax=B... 57 5e-07 UniRef50_A3W1D7 Transcriptional regulator, AraC family protein n... 57 5e-07 UniRef50_B5JMW9 Transcriptional regulator, AraC family protein n... 57 5e-07 UniRef50_UPI0000DAF41A hypothetical protein PaerPA_01003251 n=1 ... 57 5e-07 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 57 5e-07 UniRef50_Q2SHV1 AraC-type DNA-binding domain-containing protein ... 57 6e-07 UniRef50_UPI0001787E19 transcriptional regulator, AraC family n=... 57 6e-07 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 57 6e-07 UniRef50_B5KB88 Transcriptional regulator, AraC family n=1 Tax=O... 57 6e-07 UniRef50_C6D0B3 Transcriptional regulator, AraC family n=1 Tax=P... 57 6e-07 UniRef50_UPI0001C373B4 transcriptional regulator, AraC family pr... 57 6e-07 UniRef50_C1P8W3 Transcriptional regulator, AraC family n=1 Tax=B... 57 7e-07 UniRef50_C0EGL1 Putative uncharacterized protein n=1 Tax=Clostri... 57 7e-07 UniRef50_C9AAA4 Transcriptional regulator n=3 Tax=Enterococcus c... 57 7e-07 UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminoc... 57 7e-07 UniRef50_C4Z413 AraC family transcriptional regulator, arabinose... 57 7e-07 UniRef50_D1QW91 Arabinose operon regulatory protein n=1 Tax=Prev... 57 7e-07 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 57 7e-07 UniRef50_C1I9D8 Methylated-DNA-[protein]-cysteine S-methyltransf... 57 7e-07 UniRef50_B1HSI7 Transcriptional regulator, AraC family n=2 Tax=B... 57 8e-07 UniRef50_B8HZN5 Transcriptional regulator, AraC family n=2 Tax=B... 57 8e-07 UniRef50_A6M0N1 Response regulator receiver protein n=1 Tax=Clos... 57 8e-07 UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivor... 57 8e-07 UniRef50_D2LWT4 Transcriptional regulator, AraC family n=1 Tax=B... 57 9e-07 UniRef50_Q2SQA4 Transcriptional regulator containing an amidase ... 57 9e-07 UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=B... 57 9e-07 UniRef50_C5RQN6 Transcriptional regulator, AraC family n=1 Tax=C... 57 9e-07 UniRef50_Q11KV0 Transcriptional regulator, AraC family n=1 Tax=C... 57 9e-07 UniRef50_A6DG33 Transcriptional regulator, AraC family protein n... 57 9e-07 UniRef50_D0M881 AraC-type DNA-binding domain-containing protein ... 57 1e-06 UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonel... 57 1e-06 UniRef50_Q893H5 Transcriptional regulatory protein n=1 Tax=Clost... 57 1e-06 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 57 1e-06 UniRef50_Q0ARR3 Transcriptional regulator, AraC family with amid... 56 1e-06 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 56 1e-06 UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n... 56 1e-06 UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA met... 56 1e-06 UniRef50_C3R8A9 Sensor protein n=2 Tax=Bacteroides RepID=C3R8A9_... 56 1e-06 UniRef50_C6XTR7 Helix-turn-helix-domain containing protein AraC ... 56 1e-06 UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostri... 56 1e-06 UniRef50_Q8NYT6 Uncharacterized HTH-type transcriptional regulat... 56 1e-06 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 56 1e-06 UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n... 56 1e-06 UniRef50_A9KSI4 Two component transcriptional regulator, AraC fa... 56 1e-06 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 56 1e-06 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 56 1e-06 UniRef50_P45008 Uncharacterized HTH-type transcriptional regulat... 56 1e-06 UniRef50_B3XR19 Transcriptional regulator, AraC family n=2 Tax=L... 56 1e-06 UniRef50_UPI0001787EF3 transcriptional regulator, AraC family n=... 56 1e-06 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 56 1e-06 UniRef50_B2HU78 AraC-type DNA-binding domain-containing protein ... 56 1e-06 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 56 1e-06 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 56 1e-06 UniRef50_C0EHT5 Putative uncharacterized protein n=1 Tax=Clostri... 56 1e-06 UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=C... 56 1e-06 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 56 2e-06 UniRef50_C6D2P5 Transcriptional regulator, AraC family n=1 Tax=P... 56 2e-06 UniRef50_C0FPB8 Putative uncharacterized protein n=1 Tax=Rosebur... 56 2e-06 UniRef50_A9E3W0 Polyphosphate kinase n=1 Tax=Kordia algicida OT-... 56 2e-06 UniRef50_A2TYF7 Regulatory helix-turn-helix protein, AraC family... 56 2e-06 UniRef50_C7R5W7 Transcriptional regulator, AraC family n=1 Tax=K... 56 2e-06 UniRef50_Q0SUF5 Transcriptional regulator, AraC family n=4 Tax=C... 56 2e-06 UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 T... 56 2e-06 UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 ... 56 2e-06 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 56 2e-06 UniRef50_Q15ZQ2 Transcriptional regulator, AraC family with amid... 55 2e-06 UniRef50_A5G651 Two component transcriptional regulator, AraC fa... 55 2e-06 UniRef50_A4AUT1 Probable transcriptional regulatory protein n=1 ... 55 2e-06 UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacteriu... 55 2e-06 UniRef50_Q0I0N1 Transcriptional regulator, AraC family with amid... 55 2e-06 UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=A... 55 2e-06 UniRef50_C0AAT3 AraC-type DNA-binding domain-containing protein-... 55 2e-06 UniRef50_A8SR16 Putative uncharacterized protein n=1 Tax=Coproco... 55 2e-06 UniRef50_A5N5Q2 Transcriptional regulator n=3 Tax=Firmicutes Rep... 55 2e-06 UniRef50_D2LZT6 Two component transcriptional regulator, AraC fa... 55 2e-06 UniRef50_C4Z408 Two-component system, response regulator YesN n=... 55 2e-06 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 55 2e-06 UniRef50_C6D8S9 Two component transcriptional regulator, AraC fa... 55 2e-06 UniRef50_A6TGX0 Regulation of superoxide response regulon n=6 Ta... 55 2e-06 UniRef50_Q7P089 Probable transcriptional regulatory protein n=1 ... 55 2e-06 UniRef50_C2Z9K1 Transcriptional regulator, AraC n=2 Tax=Bacillus... 55 2e-06 UniRef50_Q393N4 Transcriptional regulator, AraC family with amid... 55 2e-06 UniRef50_C6BZC3 Transcriptional regulator, AraC family n=1 Tax=D... 55 2e-06 UniRef50_Q24N17 Putative uncharacterized protein n=1 Tax=Desulfi... 55 2e-06 UniRef50_A9KKI7 Two component transcriptional regulator, AraC fa... 55 2e-06 UniRef50_C9A6B7 Transcriptional regulator n=1 Tax=Enterococcus c... 55 2e-06 UniRef50_B9CPJ5 Putative transcriptional regulator n=1 Tax=Staph... 55 2e-06 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 55 2e-06 UniRef50_Q2SNN6 Transcriptional regulator containing an amidase ... 55 2e-06 UniRef50_D2EHC6 Transcriptional regulator n=1 Tax=Pediococcus ac... 55 2e-06 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 55 3e-06 UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein ... 55 3e-06 >UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Tax=Enterobacteriaceae RepID=CHBR_ECOLI Length = 280 Score = 578 bits (1491), Expect = e-164, Method: Compositional matrix adjust. Identities = 279/280 (99%), Positives = 279/280 (99%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN Sbjct: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR Sbjct: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 TNNAFLTYVETVISSLNFRETGLEE VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK Sbjct: 121 TNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS Sbjct: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ Sbjct: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 >UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae RepID=D2TGS1_CITRO Length = 282 Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust. Identities = 241/279 (86%), Positives = 261/279 (93%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEING 61 +Q APEI A EQQLFNGKNFHVFIYNKTES GLHQHDYYEFTLVLTGRY+QEING Sbjct: 4 LQATATAPEITVAHEQQLFNGKNFHVFIYNKTESACGLHQHDYYEFTLVLTGRYYQEING 63 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 KRVLLERGDFVFIPLGSHHQSFYEFG+TRILNVGISK FFEQHY PL+PYCFVASQVYR Sbjct: 64 KRVLLERGDFVFIPLGSHHQSFYEFGSTRILNVGISKHFFEQHYSPLMPYCFVASQVYRI 123 Query: 122 NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 N+AFLTYVETV++SLNFR+TGLEE VE+VTFY+INRLRHYREEQV DD+PQWLK+TVE M Sbjct: 124 NSAFLTYVETVVASLNFRDTGLEEFVEVVTFYIINRLRHYREEQVPDDIPQWLKATVETM 183 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H+KEQF E+ALENM+ALSAKSQEYLTRATQRYY KTPMQ+INEIRINFAKKQLEMTNYSV Sbjct: 184 HNKEQFGENALENMIALSAKSQEYLTRATQRYYRKTPMQLINEIRINFAKKQLEMTNYSV 243 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 TDIAFEAGYSSPSLFIKTFKK+TSFTP SYRKKLT+++Q Sbjct: 244 TDIAFEAGYSSPSLFIKTFKKMTSFTPNSYRKKLTQYSQ 282 >UniRef50_C4X747 Negative transcriptional regulator of cel operon n=8 Tax=Enterobacteriaceae RepID=C4X747_KLEPN Length = 279 Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust. Identities = 227/279 (81%), Positives = 250/279 (89%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 M QP + EI+TAREQQLFNGKNFHV IYNKTES+SGLHQHDYYEFT+VLTGRY+QEIN Sbjct: 1 MRQPRMMTTEISTAREQQLFNGKNFHVVIYNKTESVSGLHQHDYYEFTVVLTGRYYQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIP+GSHHQSFYEFGATRILNVGIS+RFFE+HYLPLLP+ VASQVY Sbjct: 61 GKRVLLERGDFVFIPMGSHHQSFYEFGATRILNVGISRRFFEKHYLPLLPFGLVASQVYA 120 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 +AFL YVE+VI+SLNFRET +E +E+V+FYVINRLRHYREE V D PQWLK+TVE Sbjct: 121 VQSAFLGYVESVIASLNFRETEFDEFIELVSFYVINRLRHYREEPVADVTPQWLKNTVEA 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDK +F E ALENMV LS K+QEYLTRATQRYYGKTPMQIIN+IRINFAKKQLE+TNYS Sbjct: 181 MHDKLKFGEGALENMVRLSGKTQEYLTRATQRYYGKTPMQIINDIRINFAKKQLEITNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 VTDIA+E+GYSSPSLFIKTFKKLTSFTP SYRK LT N Sbjct: 241 VTDIAYESGYSSPSLFIKTFKKLTSFTPSSYRKHLTSIN 279 >UniRef50_C6D149 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D149_PAESJ Length = 279 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 117/279 (41%), Gaps = 15/279 (5%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +N P + A NFH I + LH HD+YE +V++G+ +NG L Sbjct: 1 MNVPMLYAAALIDPLVQSNFH--IVHSVRHAYPLHGHDFYEIFIVISGQCTHLVNGDTQL 58 Query: 66 LERGDFVFI-PLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA 124 L G VFI P +H E G R LNV K E + + F + Sbjct: 59 LREGAMVFIRPDDTHSYDLLEGGDCRFLNVNFYKEVVEGAFDYIGHAAFAQALRSPQLPP 118 Query: 125 FLTYVETVISSLN--------FRETGLEELVEMVTFYVINRLRHYREEQVIDD---VPQW 173 F+ T + +L F T ++ M ++ + L H+ E D +PQW Sbjct: 119 FIMLPGTDMEALMRKSEQIQLFNSTDKQKARTMARSFLSDALTHFFLEFRNDGTQAMPQW 178 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + ++ KE FS + L + L+ +S +L R ++Y TP +N +R+ AK Sbjct: 179 FDHLLAQLQRKENFS-AGLPRLRELTDRSDGHLNRVFKQYLRMTPTAYLNHLRLGHAKNL 237 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L T + DIA+EAG+ + S F FK P R Sbjct: 238 LLTTQLPIVDIAYEAGFDNLSHFYHLFKDAYGIAPGKIR 276 >UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3J7_9BACL Length = 281 Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 23/263 (8%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFY 84 H F E S +H HD+YE LV G+ +NG+ V + G VFI P H Sbjct: 22 HFFTVPSLEYASPIHCHDFYELFLVTQGQALHIVNGEAVPITEGTLVFIRPQDIHCYEKL 81 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN--NAFLTYVETVISSLNFRETG 142 + +N+ ++ + + F+ S + N ++ L V + + R T Sbjct: 82 QEHDCEFINLCYTREVIHE------VFAFLGSSITPENLLSSVLPPVTLLSTGEKERLTD 135 Query: 143 LEELVEMVT--FYVINRLRHYREEQVID-----------DVPQWLKSTVEKMHDKEQFSE 189 E + +V V LR E +I P WL+S + +M KE FSE Sbjct: 136 RLERINLVQDQLQVAGLLRAVLVELLIQYFWKYQQTDTKAYPLWLESLLLQMQRKENFSE 195 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 ++ M LS +S ++ R + TP++ IN +R+++AK L T ++TDIA AG Sbjct: 196 -GVQRMYELSERSPGHINRVFRSLLHTTPVEYINRLRLDYAKHMLVTTRLNITDIALSAG 254 Query: 250 YSSPSLFIKTFKKLTSFTPKSYR 272 +++ S + FKK TP ++R Sbjct: 255 FNNLSHYYHLFKKEFGITPLAFR 277 >UniRef50_Q28QP5 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28QP5_JANSC Length = 284 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 75/276 (27%), Positives = 113/276 (40%), Gaps = 33/276 (11%) Query: 19 LFNGKNFHVFIYNKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PL 76 L G+ FH +E+ L H HDYYE L+ G+ + ING +LE G VF+ P Sbjct: 14 LSPGEAFHFVRKELSEASPVLEHDHDYYELFLIQQGQVYHWINGLEEMLEPGHMVFVRPS 73 Query: 77 GSHHQSFYEFGATRILNVG----------------ISKRFFEQHYLPLLPYCFVASQVYR 120 H +ILNV RFF Q + Q R Sbjct: 74 DRHALQGAPGTGAKILNVMFRTQTAAHLVTRYADVFGGRFFWQPGPLPVTLRLHGPQRER 133 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDD--VPQWLKSTV 178 N+ LT +FR EL ++++ + H + I D P WL Sbjct: 134 AINSMLTL------DTSFRNLARIEL------FLLSVMTHVLDTGEIVDGRAPGWLLQAC 181 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + F + A + + + +SQ ++ R +RY G +P Q +N IRI A L T Sbjct: 182 HAAREPRVFRQGA-DGFLHAAGRSQAHVCRQARRYLGLSPTQYVNRIRIQHAAMLLAGTE 240 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + DIA + G+ + S F + F++ TP+ YR + Sbjct: 241 RGLPDIAADCGFENLSYFHRLFREQYGTTPRGYRHR 276 >UniRef50_D1N7W9 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7W9_9BACT Length = 317 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 39/287 (13%) Query: 13 TAREQQLF-NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 R+Q +G N H ++ H H++ E +L+G +NG++ LLE Sbjct: 37 AGRKQSFIPSGGNLHYHSLPSGGTVE--HSHEFGELIFLLSGSIIHRVNGEKQLLEPNSV 94 Query: 72 VFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL-TYVE 130 VF+ H GA + +S V Y ++AFL Y E Sbjct: 95 VFVRPDDRHGFLPAPGAPDCELLLLSFHLELF----------VTISRYLEDDAFLHRYTE 144 Query: 131 TVISSLNFR-----------------ETGLEELVEMVTFYVINR---LRHYREEQVI--- 167 +V+ ++ FR G+ + + F V+ R + ++ Sbjct: 145 SVLPAV-FRVPESRMNELSLELLSLNAQGITPAIRKIRFKVLLAELFTRFFLPQEAAPGS 203 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 D P+WL+S EKM E F L+ M LS + EYL + +++ ++P + INE+RI Sbjct: 204 SDAPEWLESLCEKMKTPENFI-PGLKRMQQLSGYTPEYLCKVFRKHLDRSPTEFINELRI 262 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 N A + L + S+ ++A+ + S S F F+K S TP YRK+ Sbjct: 263 NHAARLLADSGESIAELAYRLNFQSLSRFYHLFRKQYSCTPAEYRKR 309 >UniRef50_B1ZSX4 Transcriptional regulator, AraC family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSX4_OPITP Length = 279 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 21/250 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHH-QSFYEFGATRILNVGI 96 LH HDY E V G +NG L RG VFI PL HH E G T + N + Sbjct: 32 LHDHDYPEVFWVSEGVMRHTVNGVTTELGRGRLVFIRPLDRHHFLGAGENGGT-VCNFAL 90 Query: 97 SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVIN 156 + A + + A V+ + L + EL + T + + Sbjct: 91 RRDLLAAARRRYFARHRGA---WWHDAAMPLGVQLSGAELRALDQAARELASLRTLTIAD 147 Query: 157 ------------RLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 R R E Q + P WL + ++ D ++ + + +V L+ S E Sbjct: 148 VDRFLLNLFHLLREREAPERQATE--PAWLAAARRELSDPQKLA-GGVNQLVRLAGCSPE 204 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 +L R +R +G TP ++N R+++A +L+ ++ ++ DI+ AG+ S S F F++ Sbjct: 205 HLARMVRRVHGVTPTDLVNAQRLDWAAVELQFSSRAIADISLAAGFESLSHFYHLFRRQH 264 Query: 265 SFTPKSYRKK 274 TP+ +R + Sbjct: 265 GVTPRQFRLR 274 >UniRef50_C0CUZ1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUZ1_9CLOT Length = 312 Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 12/256 (4%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 FI ++ + + +H H YYE +V G IN L G F+ H Sbjct: 23 FITDRRQLVK-IHCHSYYEIFIVAQGYGTHLINSTSEPLSPGALYFVRPDDVHCYMDVTS 81 Query: 88 ATRILNVGISKRFFEQ--HYLP-------LLPYCFVASQV-YRTNNAFLTYVETVISSLN 137 +I+N+ + + F++ YL L P C QV + + LT +E ++ + Sbjct: 82 NFKIINMIVPEDTFDRLTQYLGGTFRDDLLSPPCPPHVQVSMKEFKSILTELEQLVLTKK 141 Query: 138 FRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVA 197 + + + F ++ + ++ P+WL+ +M KE F E L + Sbjct: 142 ILKEKSDVFFRITVFGLLTKYFVLSPQKSSGRTPEWLRWLSLEMLKKENFVE-GLPALYR 200 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 LS KS E+L+RA ++Y K+P Q+IN+IR+ + QL+ T+ V I +AG+ S S F Sbjct: 201 LSGKSIEHLSRACRKYLQKSPTQLINDIRLEYVVNQLQNTDEKVIAICEDAGFDSLSHFY 260 Query: 258 KTFKKLTSFTPKSYRK 273 FK+ +P +RK Sbjct: 261 HIFKQAYGMSPAQFRK 276 >UniRef50_C6D720 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D720_PAESJ Length = 289 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 24/254 (9%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI---PLGSHHQSFYEFGATRILNV 94 GLH HD++E L+L G ++NG R LL VFI + S+ Q+ G + +N+ Sbjct: 29 GLHTHDFFELFLILQGSVVHKVNGTRQLLRENTLVFIRDRDVHSYEQT--SEGDCQFINL 86 Query: 95 GISKRFFEQHYL-------------PLLPYCFVASQVYRTNNAFLTYV--ETVISSLNFR 139 K ++ + P LP + S +T ++ Y + ++ L+ + Sbjct: 87 SFYKEVIDELFAFLGAGFPSGKLFEPELPPTLLLS---KTEKEYVRYRLDQINLTPLSQK 143 Query: 140 ETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 E+ ++T +R E+ P W + ++M KE F+ ++ LS Sbjct: 144 LVVKAEVRALLTDLFFRYIRITAEKDEPYGQPDWFLALCQEMRKKEHFTRGT-SALLQLS 202 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 KS YL R ++ +P + IN++R+++A+ L T+ + DI+ E G + S F + Sbjct: 203 GKSHAYLCRVFKQQLRISPTRFINDLRLSYAENLLLNTDMDILDISLETGLENVSYFYEL 262 Query: 260 FKKLTSFTPKSYRK 273 FK+ TP +R+ Sbjct: 263 FKRKHRMTPHRFRQ 276 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 120/244 (49%), Gaps = 15/244 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF------YEFGATRILN 93 H H + E V G + +I GK++ +++ D + I H F +E+ A I Sbjct: 37 HSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQPWEYIALGI-- 94 Query: 94 VGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE-MVTF 152 G+ ++ E+ PY + + R + Y+ T++ + ++ G + + + ++ Sbjct: 95 EGVQFQYSEKE----APYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQNLLEL 150 Query: 153 YVINRLRHYREEQVIDDVPQWLKST--VEKMHDKEQFSESALENMVALSAKSQEYLTRAT 210 +++ R R+E + + + VE+ ++ + L+ + AL ++ YL A Sbjct: 151 ILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINKYYLVHAF 210 Query: 211 QRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKS 270 + Y G +P+ + + R+ A+ LE TNYSVT I +G+SS S F +TF++LT TP + Sbjct: 211 KNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLTGTTPNA 270 Query: 271 YRKK 274 YRKK Sbjct: 271 YRKK 274 >UniRef50_D1N6W7 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6W7_9BACT Length = 290 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 35/254 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ---------SFYEFGATR 90 H+HD++E +L+G E+NG+R L GD V+I H+ FY Sbjct: 33 HRHDFHEIFWILSGEAEHEVNGERSRLRHGDLVWIRPHDRHRVTGASRQPLQFYNLAFPA 92 Query: 91 ILNVGISKRFFEQHY-----------LPLLPYCFVASQVYRTNNAFLTYVETVISSLNFR 139 + ++ R+ E Y +PL F + R E+ ++ F Sbjct: 93 EIIGELTARYEEFRYYFGSDNRQPIMIPLSESLF--EWLDRGAAGLRNNPESRLALDRF- 149 Query: 140 ETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 L LV ++ + N R P WL+ ++ + + + + L+ Sbjct: 150 ---LMNLVGELSTMLANPYRR---------CPAWLQEAAAELERQPEHLKLGSRALAVLA 197 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 ++ E++ R +R+ G TP + +N R ++A + L ++ ++T IA++ G+ S S F Sbjct: 198 GRTPEHVARELRRFAGVTPSEAVNRARADYAARLLSGSDLTITQIAYQCGFGSLSGFFPA 257 Query: 260 FKKLTSFTPKSYRK 273 F++ TP YR+ Sbjct: 258 FRRFYGETPLEYRR 271 >UniRef50_C6J044 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J044_9BACL Length = 294 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 35/261 (13%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNV 94 +S H HD+YEF ++ G +NG+ LL+ G VFI P H R NV Sbjct: 27 VSPEHTHDFYEFFVIEAGSCRHVVNGETQLLQAGCLVFIRPEDIHRYEQNGEEDCRFYNV 86 Query: 95 G-----------------ISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETV--ISS 135 I++R + H LP + S F+ E + +SS Sbjct: 87 PCRHSLMDEAMAFLGEEEIAERLLQSH----LPQVALLSPT--EVGEFVALFERIKLLSS 140 Query: 136 LNFRETGL---EELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 ++ ++ L L++++T Y N +EE +P WL+ + KM KE L Sbjct: 141 IDKQKARLVLKSGLIDLLTRYFFNPNPVKQEE-----IPLWLEHALSKMQLKENL-HRGL 194 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + LS +S ++ RA +RY +TP + +N+++++ A+ L T V +IA E G+ + Sbjct: 195 PALYELSGRSIGHVNRAFRRYLQQTPTEYLNQLKLSAARNLLLTTELRVVEIALECGFEN 254 Query: 253 PSLFIKTFKKLTSFTPKSYRK 273 S F FKK P R+ Sbjct: 255 VSHFYHQFKKWYHQAPLDLRR 275 >UniRef50_C5EKJ0 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKJ0_9FIRM Length = 301 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 105/248 (42%), Gaps = 26/248 (10%) Query: 42 HDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL---NVGISK 98 HD+YE LV +I G R L+ G I G H + A L + I Sbjct: 34 HDFYEIVLVTYRNLNLQICGNRFTLQPGGMALIRPGDIHSKSGKDNAHINLAFPSATIDA 93 Query: 99 RFF------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN---------FRETGL 143 F E+ L LPY Q+ R L ++ + LN R T Sbjct: 94 LFDYLCNEKERDGLKQLPY-VPPVQLSRPE---LLNIQEKMQLLNTIPPNECEKIRTTLR 149 Query: 144 EELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 L ++VT Y + L + +PQWL S + E SE L+ + S+ Sbjct: 150 SILFDVVTHYFLPSLH---SNHIHQSIPQWLASALTLWQTGEHRSE-GLDFFCEHTGYSK 205 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 E++ R +R + P +N R+N+A L ++YSVTDIA+E+G+ SPS F TF+ Sbjct: 206 EHICRTFKRCFDMAPTVYLNRQRLNYAINLLLHSDYSVTDIAYESGFCSPSRFYHTFRNT 265 Query: 264 TSFTPKSY 271 +PK + Sbjct: 266 YGISPKQF 273 >UniRef50_C0E9Q1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9Q1_9CLOT Length = 333 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 25/263 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD++E V +G++FQEING ++ +G + LG+ H+ + E + N+ I K Sbjct: 67 HSHDFFEIIYVYSGQFFQEINGISIVQNKGQSALLNLGAKHKVWVEHSDDIVFNILIRKS 126 Query: 100 FFEQHYLPL-----LPYCFVASQVYRTNNAFLTYVETVISSLN----------------F 138 EQ +L L L F + +Y N+ + + L+ + Sbjct: 127 MVEQVFLQLISKNNLISSFFLNSLYGMNSKKNLLLFDQMEELDEIFCGIIREYYDRDFLY 186 Query: 139 RETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD--KEQFSESALENMV 196 E + LV++ + + R+ + R +Q +++ + +V KM D + ++ L+++ Sbjct: 187 EENIIGRLVQLFSIWA--RIYYKRNDQEKNEITEIENDSVIKMLDYIQSHYNTVTLDDLA 244 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 S+ +++R + + + +I+N+++I A L T V I+ G+ S F Sbjct: 245 NYLGYSRRHVSRLLKMHTNRNLSEIVNDLKIKNACIYLNNTGLPVDKISEIIGFKESSYF 304 Query: 257 IKTFKKLTSFTPKSYRKKLTEFN 279 K FKK + YR+ L N Sbjct: 305 YKIFKKQMGCSISKYRQTLKTGN 327 >UniRef50_A3V1A1 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=A3V1A1_9RHOB Length = 277 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 102/253 (40%), Gaps = 19/253 (7%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH----QSFYEFGA 88 E LH HD+YE V G+ + L G VF+ G H + + Sbjct: 26 AERPRALHGHDFYELFWVQNGKVRHHLPDGTQTLAEGSVVFLSPGQTHALQGRGEHALVV 85 Query: 89 TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETV--ISSLNFRETGLEEL 146 + L+ + K ++H P L A ++ + + + ++ LN LE Sbjct: 86 SLCLHPALVKALVDRH--PSL-----AGHLFWSGKGIAQHHRDMRELAVLNHAAVQLER- 137 Query: 147 VEMVTFYVINRLRHYREEQVID----DVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 T L E D D P WL S F + A +VAL+ K+ Sbjct: 138 SRCDTIAAEAFLLPLCAELTTDIYPADAPDWLISACRAARQPTVFRDGA-TGLVALTGKA 196 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 +++R+ ++++G TP IN IR++ A + L SV IA + G + S F K F+ Sbjct: 197 HPHVSRSMRKHFGMTPSDYINRIRMDHAARALTTDADSVGQIAADCGIPNMSHFHKLFRA 256 Query: 263 LTSFTPKSYRKKL 275 TP YR+KL Sbjct: 257 AFGDTPLQYRQKL 269 >UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDH7_9CLOT Length = 331 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 21/269 (7%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 + H K S LH HDY+E V +G F +++ L +GD + + + H F Sbjct: 57 DLHGLPNAKNAEQSLLHNHDYFELMYVRSGSCFNVFESEKITLHQGDILLLNPNAKHDPF 116 Query: 84 YEFGATRILNVGISKRFFEQHYLPLLP-------------YCFVASQVY-----RTNNAF 125 + N+ +S+ FEQ LPLL Y +Q Y R A Sbjct: 117 TTSEGDCLFNIMLSRELFEQSMLPLLSDNHLISNFFVDYMYHINKTQDYLYFPSRNTKAI 176 Query: 126 LTYVETVISSLNFRETGLEELVEMVTFYVINRL-RHYREEQVID-DVPQWLKSTVEKMHD 183 ++E +I +E G +++E + RL R + +E I+ V L V ++ Sbjct: 177 SPFLEEIILEYINKEQGYVQVIESALVILFARLGRIFAQENHIESSVSNKLIVDV-IVYL 235 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 + ++ L ++ A S YL++ +++ G++ I++ ++ AK LE T +S + Sbjct: 236 NQHSADVTLSSLAAEFGYSSGYLSKLIRKHTGQSFTDILSNFKLEKAKHLLETTAHSTDE 295 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 IA G+ S ++F+ TP S R Sbjct: 296 IAQLTGFHDASYLSRSFRSKYGVTPSSCR 324 >UniRef50_A8RPB8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPB8_9CLOT Length = 335 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 23/251 (9%) Query: 42 HDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS---- 97 HD+YE LV +N R+ L G+ + I G H + G + +N+ Sbjct: 82 HDFYEIILVTENSLDILLNNDRIKLGHGNLLLIRPGDIHTKI-QTGDSVHINLAFPAYTV 140 Query: 98 --------------KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGL 143 K F + P++ + + + + +FL + + S + + T L Sbjct: 141 NSLFGYLYNSQAPRKELFAGSHSPIVRLSTIDTLMIQNRLSFLNQLSS--SDMEEKNTHL 198 Query: 144 EE-LVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 L++++ Y+I L + ++P WL +E + + + + ++ +V + +S Sbjct: 199 RAILIDIMYSYIIPELEKQKRSSDASNLPAWLVPALEGLSNPKNLT-MGMDYLVRQTQRS 257 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 E++ R +++ G TP IN R+N+A L T+ + D+ +E+G+ S + F FKK Sbjct: 258 PEHICRMFRKHLGITPSAYINGKRLNYAANLLIHTDMEIVDVIYESGFQSINYFYHLFKK 317 Query: 263 LTSFTPKSYRK 273 +P Y+K Sbjct: 318 EYGISPVKYKK 328 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 27/284 (9%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESI--SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A REQ F + Y + S H H+ +EF L G ++N R+ L+ G Sbjct: 27 AAGREQTQHGSPLFPIACYAEDLSCFSVAWHWHEEFEFILAALGPIHVDVNKTRLTLQTG 86 Query: 70 DFVFIPLGSHHQSFYEFGATRI--------LNVGISKRFFEQHYLPLL-----PYCFVAS 116 VFI G+ H G + L G+ F+++ PLL P+ + Sbjct: 87 QGVFINSGALHAVEPAEGRALLHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFFLLDE 146 Query: 117 QVYRTNNAFLTYVETVISSLN--------FRETGLEELVEMVTFYVINRLRHYREEQVID 168 V L E + R L ++T V +++ +EQ+ Sbjct: 147 AVPWQRQVLLCLREAWKGVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQEQIAS 206 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + + + VE+ H E+ + L VALS + R+ +++ G TP+Q + + R+ Sbjct: 207 ERMKQMLRYVEE-HYAEELTVEKLAGCVALSESA---CLRSFRQFLGITPIQYVKQFRVE 262 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A + L T ++ E G+S S FIKTF+++ TP+ YR Sbjct: 263 KAAELLRSTRLKTGEVGLECGFSDASYFIKTFREIKHCTPREYR 306 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 36/260 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-----QSFYE---FGATRI 91 H H E +L G + I+ +++L ++ D +F+ G H YE F + Sbjct: 36 HWHTECEIIRILEGEFILFIDKEKILAKKNDIIFVHSGIFHGGLPNDCIYECIVFDMKLL 95 Query: 92 L--NVGISKRFFE--------QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRET 141 L N +K+ ++ H LP S V NN ++ ++ + T Sbjct: 96 LKDNNACTKQIYDIVNHNKVIAHKLP--------SNVQALNNC----CTSLFEAMRVKST 143 Query: 142 GLEELVEMVTFYVI-----NRLRHYREEQVIDDVPQWLK-STVEKMHDKEQFSESALENM 195 G E + + +Y+I N+L + ++L+ V + + E + LE++ Sbjct: 144 GYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQLKNVITLIENEYQNPLTLEDL 203 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S S +Y R KTP++ +N RI + ++L T S+T+IA G++ S Sbjct: 204 SKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKLLATELSITEIALNCGFNDVSY 263 Query: 256 FIKTFKKLTSFTPKSYRKKL 275 FIKTFKK TPK Y K L Sbjct: 264 FIKTFKKHKGVTPKQYLKSL 283 >UniRef50_C6LBG3 Transcriptional regulator, AraC/XylS family n=2 Tax=Clostridiales RepID=C6LBG3_9FIRM Length = 259 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 123/261 (47%), Gaps = 42/261 (16%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP-LGSH--HQSFYEFGAT 89 T ++ G H+H +YE + G+ +N E DF+ IP + +H ++S Y Sbjct: 19 TRNVMG-HRHKHYELNFMTRGKTKMRLNESVFEYESYDFILIPPMVTHLLYESKYATFDN 77 Query: 90 RILNVGISKRF-FEQHYLPLLPYC----FVASQVYRTNNAFLTYVETVISSLNFRETGLE 144 ++ G+ + F + L Y F+ SQ+Y+T + +G+E Sbjct: 78 YVIWFGMKDQHPFTDKIIKLHDYDGEVQFLCSQIYKT----------------YMASGME 121 Query: 145 ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD-KEQFSESALENMVA--LSAK 201 + E++ Y+ L H R+ +++ Q ++ HD EQ + EN+ LS K Sbjct: 122 K-AELINLYLKAVLYHMRDGVILNTRRQ-----LDDTHDLTEQVLKYISENIFRQRLSVK 175 Query: 202 --------SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 S E+L+R ++ G+ +Q +NE+RI AK+ LE N ++ +I+ Y+ P Sbjct: 176 AVADRFSISPEHLSRKFKKDTGENLIQYMNELRIAEAKRLLESQNLTIKEISAGLFYTDP 235 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 F K+FKKLT +P YRKK Sbjct: 236 FYFSKSFKKLTGCSPSEYRKK 256 >UniRef50_C6J2X2 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2X2_9BACL Length = 751 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 2/114 (1%) Query: 162 REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 +E+++ D+V L +E +HDK S+ ++++M ++S YL+R + + G+T ++ Sbjct: 631 KEKKLEDNV--LLHQIIELLHDKYSDSQFSIQSMANHFSQSSSYLSRYFKEHTGRTVLEY 688 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +N IRI+ AK+ L T +VT+I GYS PS FI+ FK TP YRK++ Sbjct: 689 LNGIRIDEAKRLLIETKLTVTEIVQRIGYSDPSSFIRKFKSEFQLTPGEYRKRM 742 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 41/264 (15%) Query: 41 QHDYYEFTLVLTGRYFQEINGKRVLLERGD-FVF-IPLGSHHQSFYEFGATRILNVGISK 98 HD++E +VL G +N + +++GD FVF + L ++ + F +I+N+ Sbjct: 33 HHDFFELVIVLNGTATHIVNSEEFFIKKGDVFVFNMDLSHGYKDPHNF---KIINIMYKP 89 Query: 99 RFFEQ-----HYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNF--------------R 139 ++ P FV +R +F + ISSL + + Sbjct: 90 ERLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNTLSLSISSLEYVAELGARINEEYKRK 149 Query: 140 ETGLEELV-----EMVTF----YVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSES 190 + G + ++ EMV + Y+I E +++ D L + + D + Sbjct: 150 DQGYQTMIYARFMEMVVYLSRQYII-------ENKLLHDTFVHLAKAILFLEDN-YLNPI 201 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 LE + + S + R + YG TP I +R+N A L+ +N + DIA E+G+ Sbjct: 202 KLEKLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACSLLKNSNLCIADIALESGF 261 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 S + F + FKK+T TPK YR + Sbjct: 262 SDSNYFSRQFKKITGITPKEYRAR 285 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 127/268 (47%), Gaps = 24/268 (8%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 +H I + LH HD ++F +L G IN + + L+ GD VFI G H + Sbjct: 28 YHTKICDHRSGHIPLHWHDEFQFVFILEGEAEFHINEETICLKEGDGVFINCGCLHMAKD 87 Query: 85 EFGATRI-LNVGISKRFFEQHYL------PLL-----PYCFVASQVYRTNNAFLTYVETV 132 G T L + +S F + L P + PY + + + N+ + ++T+ Sbjct: 88 ANGTTCTYLCLNVSPHFITANELFTTFVHPYMHASQTPYILLNRKDHWPNHIYQC-IQTI 146 Query: 133 ISSLNFRETG----LEELVEMVTFY--VINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQ 186 ++ ET LE ++++T + ++ + + D + +K + +H + Sbjct: 147 QRLID--ETPAYYELELNIQLITMWKCLLQNGFQIKYDARQHDKNERMKPMLNWIH--QH 202 Query: 187 FSESALENMVALSAK-SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + E L +A + + S+ R + KTP+ +NE R+ + L+ T++++T+IA Sbjct: 203 YHEKVLLQDIARAGQLSRSECCRYFKDILKKTPLHYVNEYRVQQSLILLQETDFNITEIA 262 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 ++ G++S S FI FK++ + TP +YRK Sbjct: 263 YKVGFNSTSYFISMFKRIKNTTPLAYRK 290 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 39/266 (14%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HDY+E V +G F G+ + L +GD + + HQ + I N+ +SK Sbjct: 86 HNHDYFEIIYVHSGSCFNRFQGETIKLCKGDILLLNPTILHQIYALHEEDHIFNIMLSKS 145 Query: 100 FFEQHYLPLLPYCFVASQVYRTNNAFLTY---VETVISSLNFRETG---LEE-LVEMVTF 152 FE LL +++ NN F+ Y + ++FR + +EE + ++ Sbjct: 146 LFEGSMWQLLS----GNKI--INNFFVNYFYQMNKTKDYVHFRCSQNHLIEETITSLIAE 199 Query: 153 YVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSE-------SALENMVALSAK---- 201 Y+ + +Y QVI L + + +++ ++ F E L ++++ A+ Sbjct: 200 YLGKKPAYY---QVIQSYLIILFAYLSRIYSEQHFIEQQDLEKIGILPDIISFIAQNYQS 256 Query: 202 ------------SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 S Y +R + + GKT +I+++ ++N AK+ L TN ++TDIA + G Sbjct: 257 VTLTEIQNVFNYSSGYTSRLIKHHTGKTFSEIVHDFKLNHAKELLVSTNLNITDIAEKIG 316 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++ K FKK TP YR+ + Sbjct: 317 FNDSHYLNKVFKKRFGITPTQYRRGM 342 >UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEI4_9FIRM Length = 299 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 16/252 (6%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNVG 95 + +H H +YEF +V G +N + +GD VFI P +H FY RI+N+G Sbjct: 31 ASIHTHTFYEFFIVAEGSALHLVNDSIQTITQGDLVFIRPKDTHSYQFYYSDDFRIINIG 90 Query: 96 ISK------RFFEQHYLPL-------LPYCFVASQVYRTN-NAFLTYVETVISSLNFRET 141 S+ R F H L LP C + R + + ++ + ++T Sbjct: 91 FSEQLLQNIRLFLDHTAMLRTLTESELPPCVRLDKSGREEISVRFEEIGALMDTPKIQKT 150 Query: 142 GLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAK 201 + + + EE P W + + +M + M+ LS+ Sbjct: 151 VFYAKCCLADVFTRYFFSYDTEEFPTASCPSWFQPMLNEMQKFDNL-RIGFPKMIELSSC 209 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S +L R + TP + IN R+ ++ L T+ + +I+ G+SS S F FK Sbjct: 210 SSNHLCRVFKSVMSVTPTEYINSKRLEYSVYLLTQTSKEIIEISMLCGFSSLSHFYHLFK 269 Query: 262 KLTSFTPKSYRK 273 K P +RK Sbjct: 270 KKYQCPPSRFRK 281 >UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU1_BACSK Length = 308 Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 35/295 (11%) Query: 14 AREQQLFNGKNF------HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 A ++QL +G + H+ I+ H HD E +GR ++G+ L+E Sbjct: 7 AYKEQLPSGNDIREPIHCHMQTSEPNRRIASPHFHDAIELLYSFSGRARVFVSGQPFLME 66 Query: 68 RGDFVFIPLGSHHQSFYEFG-ATRILNVGI--------SKRFFEQHYLPLLPYCFVASQ- 117 +GD V I H + E G L + + S+ FE Y+ P+ S Sbjct: 67 KGDLVIINSNEVHAIWGESGEKVEYLVIKLDPEVLYSTSRSIFESKYV--FPFTMSKSSP 124 Query: 118 --VYRTNNAFLTYVETVISSLN----FRETGLEELVEM-VTFYVINRLRHYREEQVIDDV 170 + ++ T + I+ +N ++ G + + + + + LRH+R+ + Sbjct: 125 QTLLKSGEMASTVIPATIAKINDEFSHKDYGYDFAIRIHICTIFLAVLRHWRQSGISVGT 184 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAK--------SQEYLTRATQRYYGKTPMQII 222 S + M Q ES AL+AK S Y +R + G++ +++ Sbjct: 185 ESINDSDFQLMRQVFQLLES--HYATALTAKQAAATCNLSYSYFSRKIKSITGRSFTELL 242 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 N IRI A+K L T+ S+T++A GYSS S FI+ FK+ +P ++K+L + Sbjct: 243 NYIRITEAEKLLTTTDLSITEVAVSVGYSSTSYFIQHFKQAKHLSPLRFKKRLQQ 297 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 61/272 (22%), Positives = 121/272 (44%), Gaps = 26/272 (9%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 N H+ +N++ H+HD++E V+ G ++G+R+LLE+GDF + + HQ Sbjct: 91 NAHIPFFNRSPQP---HKHDFFELVYVVRGSMKNVVDGRRILLEQGDFCLMNPNAVHQVE 147 Query: 84 YEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNNA--FLTYV-----ET 131 + +N + K F + +L + L F +Y N +L + E Sbjct: 148 TDGKDPLAINFLMKKELFNKAFLSIVLENELFANFFVDSIYHKKNKQNYLVFSARHLEEP 207 Query: 132 VISSL---NFRETGLEELVEM------VTFYVINRLRHYREEQVIDDVPQWLKSTVEKM- 181 +IS FRE ++L ++ + R Y+ E + + + K+ Sbjct: 208 IISQYLLQIFREYENDQLYSQRVIESAMSCLFVEFTRSYKRELEFESLQDLPGGNISKII 267 Query: 182 -HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + E + + L+ +YL ++Y G++ +I+ + R+ A + L+ T Sbjct: 268 SYLSENYRTATLQTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQFRLAHACELLKQTELP 327 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 ++D+A E+GY++ + F K F++ +P YR Sbjct: 328 ISDVAQESGYTNRTYFYKVFQQKFGMSPNDYR 359 >UniRef50_C6IIU9 Transcriptional regulator n=2 Tax=Bacteroides RepID=C6IIU9_9BACE Length = 278 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 12/258 (4%) Query: 25 FHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 FH+ N T S LH HDY E V G +NG + L GD + + H Sbjct: 18 FHIARVNITSSQDLSLHSHDYAEILWVEKGTGIHHVNGHQFRLSPGDLIMVRPKDRHTFS 77 Query: 84 YEFGATRILNVGIS--------KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISS 135 I+NV +R+FE L Q+ + + + Sbjct: 78 SSGKGIVIVNVAFPVETLDYFRQRYFEWSNLYFWTTGMFPFQMRLSRDIVKRLSSRAEEA 137 Query: 136 LNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENM 195 + + + ++ ++ + ++ ++ + + ++P WL + ++K + E F + + Sbjct: 138 MKYGRSNIQ--LDSLLLFIFRQITANEKVEDSSEIPVWLFNAIQKFNSPEFFIQ-GIAGF 194 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 V L ++ +Y+ R + ++ K+ +INE ++ +A QL +T+ + +I G+ + Sbjct: 195 VTLCDRNIDYVNRIVKLHFHKSLTDLINEFKMQYATTQLSITSMPIKEICTNCGFRNLGH 254 Query: 256 FIKTFKKLTSFTPKSYRK 273 F K F+ + + TP YR+ Sbjct: 255 FYKIFRSVYNQTPYEYRR 272 >UniRef50_B7I0Q9 Transcriptional regulator, AraC family protein n=11 Tax=Bacillales RepID=B7I0Q9_BACC7 Length = 287 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%) Query: 116 SQVYRTNNAFLTYVET---VISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ 172 + Y NN +ET ++ SL G EE + Y++N H+ + ++ + Sbjct: 111 DKTYHKNNTLSFQLETFKHILPSLEINSVGYEEQFHKLMQYILNE--HFNTYKEVESLSA 168 Query: 173 WLKSTVEKMHDKEQFSES----------ALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 ST E+++ + + L ++ +S S +L R + YGKTP Q I Sbjct: 169 IRTSTREELYRRICIAHDYIRAYYDKTIKLNDIARISCLSPNHLLRTYTQIYGKTPHQHI 228 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +E R+ AK+ L + ++TDI F+ G+ +P F K FK+ +PK YRKK+ Sbjct: 229 SEFRVTKAKQLLSELSNNMTDITFKLGFQNPVSFSKMFKQHVGISPKEYRKKV 281 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 23/207 (11%) Query: 74 IPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVI 133 I L + S+Y G GIS F +Q + Y ++ + L Y ++ Sbjct: 80 ISLSASPLSYYTVGVD-----GISFSFHDQKEFQIFHY-------HQKHADLLFYFHSLF 127 Query: 134 SSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV-------PQWLKSTVEKMHDKEQ 186 L+ + G EE+ + +I++LR + + D P + V++ D Sbjct: 128 QELDEKNDGYEEICKHTLAILISQLRRF----AVSDFQLFPSFHPSKECALVKRYLDSHY 183 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + LE + +LS ++ YL+ RYYG +P+ + RI K LE T++ ++DIA Sbjct: 184 SDDINLEQLASLSHLNKYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAH 243 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRK 273 AG+SS S ++F+K T YR+ Sbjct: 244 LAGFSSQSYLAQSFRKYCGMTAGEYRR 270 >UniRef50_C7PAR8 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAR8_CHIPD Length = 279 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 43/266 (16%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRI 91 T+ IS LH HDY E + G ING L GD + + P H S G T + Sbjct: 28 TDDIS-LHNHDYAEIFWIEHGNGTHLINGLNTPLNTGDIIMMRPDDLHTFSSNRQGIT-M 85 Query: 92 LNVGI---SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE 148 +N+ + ++F++ Y P S+ + L Y T+ E ++ Sbjct: 86 MNLAFPFKTVQYFKKRYFP-------ESEDFFWKKGDLPYQATLD----------ETILR 128 Query: 149 MVTFYVINRLRHYREEQVID--------------------DVPQWLKSTVEKMHDKEQFS 188 +T +H +D D+P WL + ++ + Sbjct: 129 SITHLAEKMWKHQDSAIYLDSFLLSLFKLLLPTENQPDNQDIPAWLNNAIQLFPAQPDLF 188 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 ++ ++ +Y+ R ++ Y KT ++ E+R+ FA +QL +TN + I + Sbjct: 189 RLGARGFASICGRNIDYVNRTVRKCYDKTLSTLVTELRMQFAARQLAITNAPIKSICHDC 248 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 G+++ F K F+ + TP YR++ Sbjct: 249 GFNNLGHFYKQFQTIYQQTPSQYREQ 274 >UniRef50_A4EK09 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EK09_9RHOB Length = 288 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 10/244 (4%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNVG 95 + H HD++E L+ +G+ +NG+ LE G FI P H S +I+NV Sbjct: 31 NAAHDHDFFEVFLIESGQTSHWVNGETQQLEPGHLTFIRPNDVHAFSADRTKGCQIINVM 90 Query: 96 I---SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE--TVISSLNFRETGLEELVEMV 150 + + Y + F S+ L V I+ +T L + Sbjct: 91 FRVETAKHLTNRYAKTIESAFFDSRAALPEMHMLDPVRFARAINVAQQLQTAHRSLARIE 150 Query: 151 TFYVI--NRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTR 208 F ++ NR+ + + P+W + FS+ A +A + +S E++ R Sbjct: 151 EFLLVLTNRVADA-AGGIAQNAPRWFAEACSAAQSQTVFSKGAAG-FIAAAGRSHEHVCR 208 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 + G TP + IN++RI +A L S+ D+ + G+ + S F + F++ TP Sbjct: 209 TCKAVTGLTPSEYINQVRIEYAAHLLRSDERSIDDVVNDCGFDNSSYFYRLFRRQYGTTP 268 Query: 269 KSYR 272 ++YR Sbjct: 269 RAYR 272 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 12/250 (4%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI-LNV 94 I H HD+ E +++ G+ +I G+RV LE+GD + G H E G T L++ Sbjct: 26 IGDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVKHYDITEPGMTNAQLHI 85 Query: 95 GISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEM-VTFY 153 G E + P+ + ++A L+ + +I + + G + +++ V Sbjct: 86 GFRNFTLEGYSRNTFPFKKAFLRKKEEDSAILSISKQIIEEKDAEKPGYDLILKAFVMQL 145 Query: 154 VINRLRHYREEQVIDD---------VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 +I+ LR EQ+ ++ Q L + + +K + +L + S Sbjct: 146 IIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEKHHTEDVSLSTLSQTMYISPA 205 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y+++ + G++P+ + +IR++ A++ L+ N +V A GY+ F K FKK Sbjct: 206 YISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQAANMVGYNDAYYFSKLFKKYY 265 Query: 265 SFTP-KSYRK 273 F P +++RK Sbjct: 266 GFPPSENWRK 275 >UniRef50_Q8EL34 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EL34_OCEIH Length = 268 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 23/256 (8%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 +N+ E + H+HD Y+ L G +N + + + +F+ IP + H A+ Sbjct: 17 HNEKEKVKS-HEHDTYQLLYTLKGTGICTLNHQEYAIAQDNFIIIPPETEHS----IAAS 71 Query: 90 RILNVGI----SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSL--------N 137 + V + + F + L+P F +++V + + + + ++ + N Sbjct: 72 SKMTVLVLEFEADIFHSDVKMELIPEVFRSARVQKLSTFDSSEIRQLLRKMLYEQSYGDN 131 Query: 138 FRETGLE-ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 ETG++ + E+ F++I R H E D+ ++ D F E++ Sbjct: 132 LWETGIKIYMAEL--FFIIARSFH---EPSQTDINTLRVEQLKHYIDTRYFDIKNAEDIA 186 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 S+ Y+ + YY TPMQ + E+R+ K+ L T+ + I FE G+ S S F Sbjct: 187 DRMDMSKRYIQSIFKEYYNSTPMQYLTEVRLGLVKQMLVDTDKDIVSICFEVGFESLSTF 246 Query: 257 IKTFKKLTSFTPKSYR 272 + FK P YR Sbjct: 247 YRLFKNNVGVPPNMYR 262 >UniRef50_C6W159 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W159_DYAFD Length = 264 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 10/235 (4%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H+ T +L G ++ + G VF G HQ+ +R N+ + Sbjct: 39 LHAHENAHVTTLLAGATLEKRQRSECYRQAGQAVFFHAGEPHQNSNTLPGSRNFNIEFTT 98 Query: 99 RFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL 158 FF+ ++L +A V A L +V SL+ + + V M +++ Sbjct: 99 DFFQTYHLD---PSDIAGAVSNNPLAALVFVNAYRESLH-NDPMANDSVAMAILSLLDT- 153 Query: 159 RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTP 218 + P+W+ E +HD+ + LE + + +++ +RY+ + Sbjct: 154 ----RTNAGNRPPKWVGQVTELLHDRWN-EQVGLEELSKETGVHSVTISKHFRRYFACSL 208 Query: 219 MQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + + ++++ A ++ T+ +T IA+EAG++ S F + FK++T F PK YR Sbjct: 209 SEYMRKLKVLNALSLIKNTSNQLTHIAYEAGFADQSHFTRVFKEVTGFLPKQYRN 263 >UniRef50_C0Z7V8 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7V8_BREBN Length = 285 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 22/257 (8%) Query: 39 LHQHD-YYEFTLVLTGRYFQEINGK-RVLLERGDFVFIPLGSHHQSFYEFGATRILNVGI 96 LHQHD +++ +++L G + + R L R V P G H+ F E A R+L I Sbjct: 31 LHQHDSFFQISMLLQGNPLVQCEQQFRKLAGRQRLVASP-GCQHRHFSEAEAMRLLLFFI 89 Query: 97 SKRFFEQHYLPLL-----PYCFVASQVYRTNNAFLTYVETVISSL---NFRETGLEEL-V 147 S E Y + P FV T+ F ETV + + + LE+L Sbjct: 90 SPSLLESVYADKMEAVSGPIEFVPWSEDETDG-FQRIAETVCTQMITQQVEKLALEQLEW 148 Query: 148 EMVTFYVI----NRLRHYREEQVI--DDVPQWLKSTVEKMHD---KEQFSESALENMVAL 198 E+ T + + + +R + + +P + ++++ D + + +L+ + + Sbjct: 149 ELATLLLTVQEGSHTQKWRGKHLAPYSAIPASIHPVLKRVTDFIQDDVTVDCSLDTLAGV 208 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + S+ +L R + G+TP Q + + R+ A L + +VT IAFE G+ S S F + Sbjct: 209 AGISKFHLIRLFREQIGRTPAQYVTDQRVTRAAWLLRNSKLAVTVIAFEVGFGSVSTFER 268 Query: 259 TFKKLTSFTPKSYRKKL 275 F+K S +P YR + Sbjct: 269 AFRKKYSVSPLDYRNSM 285 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 24/252 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H YE +++G + +NG + L+ GD FI G H G T I V Sbjct: 36 HWHTEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGILH------GGTPIDCVYECIV 89 Query: 100 FFEQHYLPLLPYCF-----------VASQVYRTNNAFL-TYVETVISSLNFRETGLEELV 147 F + L + C V + + T+N L T + S+ ++ G E + Sbjct: 90 FDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNLELQTVCNYLFESMAQKKLGYELVT 149 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD-----KEQFSES-ALENMVALSAK 201 + ++++ + +R + + + + + ++Q+ + LE++ + Sbjct: 150 QGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQQYPDPLTLEDLSKAAGM 209 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 + +Y R + ++P+ +N RI + +QL TN S+T+IA G++ S FIKTFK Sbjct: 210 TPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIALNCGFNDISYFIKTFK 269 Query: 262 KLTSFTPKSYRK 273 K TPK Y K Sbjct: 270 KYKGVTPKQYLK 281 >UniRef50_C6W763 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W763_DYAFD Length = 292 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 40/262 (15%) Query: 37 SGLHQHDYYE---FTLVLTGRYFQEINGKRVLLERGD-FVFIPLGSHHQSFYEFGATRIL 92 +G+H+HD+YE FT V G+ I+ + + R D F+ +P H E R Sbjct: 44 NGVHRHDFYEVLWFTDVEPGQA-HYIDFNQYPIARNDLFLLLPDQVHSMDQRE---KRGF 99 Query: 93 NVGISKRFFEQHYLPLLPYCFVASQVYR------------------TNNAFLTYVETVIS 134 + ISK FFE+ F+ S +++ NA +T + T Sbjct: 100 VMAISKDFFER---------FIGSDIFKLFRYSANFTVTIPDSRLPVMNALMTLIRTEYE 150 Query: 135 SLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALEN 194 R LE + + + + + D Q L ++E ++ + Q N Sbjct: 151 DGK-RPAILESYLRSWFLHCFDLQKEAGDAAPRDARLQMLLESIE-LNYRRQRKADFYAN 208 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 ++LSAK LTR + +GKT QIIN+ + AK+++ + +I++E G+S PS Sbjct: 209 ELSLSAKRLNELTRGS---FGKTISQIINDRLVLEAKREIGYLRKPIKEISYELGFSEPS 265 Query: 255 LFIKTFKKLTSFTPKSYRKKLT 276 F + F K T P+ +RKK+ Sbjct: 266 YFTRFFGKQTGLAPEDFRKKIA 287 >UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDW5_9CLOT Length = 326 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 19/254 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H Y+E V G+ + + L GD + + H+ + E + N+ ISK Sbjct: 68 LHTHTYFEMIYVYHGKAYNNFADSSMTLHTGDILILNPNIPHRLYIESPEDIVFNIMISK 127 Query: 99 RFFEQHYLPLLP-----YCFVASQVYRTNNA-------------FLTYVETVISSLNFRE 140 FE+ +L L+ F S +Y N A ++ +I + Sbjct: 128 DLFEKSFLLLISENDLFSNFFISYLYHMNQASDSILFRHNPESGITAVLDMMIEEFFNKP 187 Query: 141 TGLEELVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 G E+ +E RL R Y ++ ++++ + K + +E F+E+ L + Sbjct: 188 MGYEKALESFLALTFTRLTRSYSHQENLEELKKQQKIMPIIAYIRENFAEATLVSTAQQF 247 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S++YL+R ++ GK+ +I ++ +A++ L + +++IA GY++ S F K Sbjct: 248 NYSEKYLSRLIKQRTGKSFNEISIGYKLEYARELLLNSVLPISEIAQRVGYANVSYFFKA 307 Query: 260 FKKLTSFTPKSYRK 273 FKK TP +RK Sbjct: 308 FKKRYMQTPYQFRK 321 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 9/118 (7%) Query: 156 NRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 N+ + YR E + + + EK+H K+ S NM +++Y R +R G Sbjct: 190 NKNKDYRVEYIKTAISYIQNNYSEKIHIKDL---SKQINM------NEQYFCRFFKRMIG 240 Query: 216 KTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 KTPM+ +NE RI AK+ L TN V DI E G+ + FIK FKK T P YRK Sbjct: 241 KTPMEYVNEYRIKKAKELLRETNRQVMDICLECGFHNMGNFIKVFKKHTGINPMKYRK 298 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 28/261 (10%) Query: 39 LHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +H H Y+E V G N +R++L +GD + + + H + I N+ + Sbjct: 71 MHNHGYFELVYVYHGSCVNLFPNQERIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVLK 130 Query: 98 KRFFEQHYLPLLP-----YCFVASQVYRTNNA-------------FLTYVETVISSLNFR 139 + FE+ L LL F + +YR N A +E +I+ L + Sbjct: 131 PKLFEKSMLSLLSDNPLFSNFFVNYMYRVNKARDYMLFHTNGEKRIAQTMENIITELYSK 190 Query: 140 ETGLEELVE---MVTFYVINRLRHYREE---QVIDDVPQWLKSTVEKMHDKEQFSESALE 193 E E +V F + R+ Y+E+ + D+V + + D E FS++ L+ Sbjct: 191 EMCYRRAAEAELIVLFTCLARI--YKEQLGLKGFDEVKNKQVTDIITYMD-ENFSQATLQ 247 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 ++ S YL+R +++ K +II+ ++ A LE T+ + +IA G++ Sbjct: 248 SVADHFGYSTHYLSRMIKKHTNKNFSEIIHSFKLENACTYLETTDIPMREIAELVGFNDA 307 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 S F K FK+ +P YRK+ Sbjct: 308 SYFHKVFKQKYGQSPAEYRKQ 328 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 35/262 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA--TRILNVGI- 96 H HD EF +L G I+ K + GDF+ IP GS H Y G ++I V + Sbjct: 38 HWHDEMEFIYILNGSAEICIDFKIFSVTTGDFIIIPNGSIH---YMIGKENSKISYVALV 94 Query: 97 -SKRFFEQHYL---------PLLPYCFVASQVYRTNNA----FLTYVETVISSLNFRETG 142 + E + L P++ + RT+N + +I S N + G Sbjct: 95 FNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSYG 154 Query: 143 LEELVEMVTFYVINRLRHYREEQVI-----DDVPQWLKSTVEKMHDKEQFSESALENMVA 197 + ++ F + + + ++E + ++ +K VE + + ++ ++ +N ++ Sbjct: 155 FQLEIKGSLFSIFSTI--FKEGYISLNLNSENYSDLIK--VENLKEVIKYIQTNYKNPIS 210 Query: 198 LS-----AKSQEY-LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 + A+ EY R + GKT Q IN RI A L TN S+T+IA+E G+ Sbjct: 211 IKELADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATLLLFDTNLSITEIAYEVGFG 270 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 S FIKTFKK S +P YRK Sbjct: 271 DVSYFIKTFKKFLSISPTKYRK 292 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 36/262 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILN------ 93 H H+ +E V++G +N +L + +FI G H +L Sbjct: 42 HWHEDFEIIWVISGSIKVSVNSTEHILNKNQGIFINAGFLHSIHATNDGEYVLRSIVFHP 101 Query: 94 --VGISKRFFEQHYL-PL-----LPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLE- 144 +G + Q+Y+ P+ LPY + + + L Y +V + L E G E Sbjct: 102 RLIGSIDSIYWQNYIEPIIQNKNLPYILLDPFI-NWQDKILAYSISVWNRLYNTENGFEI 160 Query: 145 ----ELVEMVTFYVINR--------LRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 EL +++ + N +R+ R I + Q+++ MH E + S L Sbjct: 161 YVRNELSQLILIVLTNHSICEAKPSIRNLRNADRIKTMLQYIQ-----MHFSETITISTL 215 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 VAL ++S+ + R R TP Q + + RI A + L T+ + DIAF+ G+ S Sbjct: 216 AR-VALISESE--VLRCFHRTIHSTPNQYLKQYRIQKACQMLIDTDMTSIDIAFQCGFQS 272 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S F KTF++ TP YRK+ Sbjct: 273 SSYFTKTFREQIGCTPLEYRKR 294 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 105/256 (41%), Gaps = 25/256 (9%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 G H H++ E T V G I G+ V +E G FIP+G H F + + + Sbjct: 34 GEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSH-VFRPKTPKKDRPLIVY 92 Query: 98 KRFFEQHYLPLL----PY------CFVAS-----QVYRTNNAFLTYVETVISSLNFRETG 142 YL L PY CF V + + + + Sbjct: 93 NCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGEYHAMFRELYQEFAAKPPA 152 Query: 143 LEELVEMVTFYVINRLRHYREE-QVI---DDVPQWLKSTVEKMH--DKEQFSESALENMV 196 ++ + ++ L YR + Q+I D PQWL S E + D+ SE L + Sbjct: 153 YMAVLASLVMRILTGL--YRHKLQIIAPAGDRPQWL-SVDEAIAFIDRNYASELKLGELA 209 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 A + S+ +R +R+ G + ++ + IR++ A + L + SV DIA GY+ F Sbjct: 210 AQAKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSVEDIAGAVGYADMKFF 269 Query: 257 IKTFKKLTSFTPKSYR 272 + FKK T TP+ YR Sbjct: 270 YRLFKKKTGVTPRQYR 285 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 45/271 (16%) Query: 34 ESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 ++I+G LH HD +F L+L G +IN +++ + GD +FI G H + + G+ Sbjct: 32 QNINGYIPLHWHDEIQFVLILKGIALFQINEEKIEVHEGDGLFINSGYLHMAEEKEGSDC 91 Query: 91 ---ILNVG----ISKRFFEQHYLPL-----LPYCFVASQVYRTNNAFLTYVETVISSLNF 138 LNV +S+ + + P LPY F+A N L V+ I+ L Sbjct: 92 TYICLNVSPHFVLSQELYSSYVQPYMFSTNLPYLFLAGNQQWAKN-ILDAVKK-INQLIQ 149 Query: 139 RETGLEE------LVEMVTFYVIN----------RLRHYREEQVIDDVPQWLKSTVEKMH 182 ++T L E L M V+N ++ +R +Q+++ W+ +H Sbjct: 150 QKTSLYEIDITMQLTLMWKNLVVNGFQLEYDQSEMIKSHRMKQMLN----WIH-----LH 200 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 E+ + LE++ S+ R +R KTP++ + + RI + L+ +VT Sbjct: 201 YVEKIT---LEDIAKAGQLSRSECCRYFKRMLNKTPLRYVMDYRIQKSLLLLQHPESNVT 257 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +++++ G++S S FI F++ + TP SY+K Sbjct: 258 EVSYQVGFNSTSYFISKFQQAMNMTPLSYKK 288 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 35/277 (12%) Query: 21 NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 NG+ FH +H HD +FT V G ++ G+ +L+ G+ +FI G H Sbjct: 49 NGRGFH-----------DVHWHDEIQFTYVSKGELTMQVEGREYVLKEGEALFINSGLIH 97 Query: 81 --QSFYEFG-------ATRILNVGISKRFFEQHYLPLLPYCFVASQV-YR---TNNAFLT 127 S E G ++L R + + LP L ++ V YR + L+ Sbjct: 98 VTTSISEDGQYEGFMFPEKLLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRESAEDEKILS 157 Query: 128 YVETVISSLNFRE--TGLE-ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDK 184 + + N +E T E E+ +T + +R+ + + +P E+M Sbjct: 158 DIRNLRELFNNKENVTAFEYEVAVRMTAIWLQIVRNVSD--TMQKMPACYLQRQERMKKM 215 Query: 185 -----EQFSESALENMVALSAK-SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 E + E+ +A SA S E R + +TPM ++ R+ + L T+ Sbjct: 216 MQYIVEHYHEAITLKEIAESASISIEECRRCFKDIIKETPMHYLSSYRVMVGMELLRTTD 275 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +TDIAF G++ S FI+ FKK TPK YR + Sbjct: 276 LDITDIAFRVGFNDSSYFIQAFKKKNGMTPKQYRNHI 312 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 42/284 (14%) Query: 21 NGKNFHVFIYNKTESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 + KN H+ ++ + E+++ LH+H +YE V G N + ++ G+ + + Sbjct: 50 DAKNLHISLHPRPENVNPKMLLHKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPN 109 Query: 78 SHHQSFYEFGATRILNVGISKRFFEQHYLPLLPY-----------CFVASQVYRTNNAFL 126 + H + N+ + FF Q+ L LL C S + R FL Sbjct: 110 TAHCPETLTDQDCVFNIMFRQNFF-QYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFL 168 Query: 127 ------TYVETVISSLNFRETGLEE-----LVEMVTFYVINRLRHYREEQVIDDVPQWLK 175 +E +I +++ E LVE+ + N D+ + K Sbjct: 169 PGKASADTIERLIVECFEKQSCYETITQSLLVELFAYLARNS----------DNSFSYPK 218 Query: 176 STVEKM------HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + E++ + +E +E L+ + S YL+R ++Y GK +I+ + R+ Sbjct: 219 NNHERLILKIITYIQESPAEITLQKVSEQFQYSTAYLSRMIKQYTGKNFSEIVRDCRLTK 278 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 AK LE ++ S+ DIA GY+ S F K FK+ TP YRK Sbjct: 279 AKYYLESSSLSILDIALILGYNDVSHFYKVFKQEIGCTPTEYRK 322 >UniRef50_D2MNX8 Transcriptional regulator, AraC family n=1 Tax=Bulleidia extructa W1219 RepID=D2MNX8_9FIRM Length = 282 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 48/277 (17%) Query: 31 NKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 N+ E I L H H +EF +L G Y ++GK L GD I H Sbjct: 15 NEIEEIDELAHWHHSFEFIEILEGEYQCHVSGKTFLAHPGDLCIINRSRIH--------- 65 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVAS-QVYRTNNAFLTYVETVIS--SLNFRETGLEEL 146 RILN K + L P F+ + ++Y+ L ET S L F+ EL Sbjct: 66 RILNQ--KKERCRKKVLIFDPDYFIHNPEIYQKYVKPLQ-EETAFSHMQLKFKSGMGAEL 122 Query: 147 VEMVTFYVINRLR-------------------------HYREEQVIDDVPQWLKSTVEK- 180 + ++ I+RL H+++E+++ + L ST+++ Sbjct: 123 IHLID--EIDRLNSEKPVGYEMETIGLIYLLLRRLYLAHHQQEKLLQENYD-LNSTIQRK 179 Query: 181 --MHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 ++ E ++E LE + S+ R + Y GK+P+ +N R+ + + L+ + Sbjct: 180 MTLYIYEHYAEHLTLEKIAQAGLVSKSTCIRLFKEYTGKSPIDFLNRYRLEVSSQLLKNS 239 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + S+TDIAFE G+S S F + FKK +P YR++ Sbjct: 240 HRSITDIAFECGFSQASYFNRQFKKEYGSSPNQYRQQ 276 >UniRef50_Q0TRX2 DNA-bindng response regulator, AraC family n=12 Tax=Clostridium RepID=Q0TRX2_CLOP1 Length = 250 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 8/110 (7%) Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 EE+++D V +++ ++KM LE + ++ S Y +R ++ GKT + I Sbjct: 147 EEKIVDKVSKYIDDNMDKML--------KLEELASICNLSPGYFSRVFKKETGKTVITYI 198 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 NE ++ AKK L+ + + +I+ + G+ FI+ FKK+T TPK++R Sbjct: 199 NEKKVERAKKLLKESKDPIINISLDLGFDDCGYFIRVFKKITGLTPKAFR 248 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 66/112 (58%), Gaps = 5/112 (4%) Query: 164 EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 ++ +D V + L E M +K ++ + A + +++Y R ++ G+ P+ +N Sbjct: 200 DRRVDTVKKTLSYMQEHMTEK-----VTMQELAAQANMNEQYFCRFFKKIIGRPPITYLN 254 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 E+RI +A + L+ T++SVT+IA E+G+++ F++TF+ + TP YRK L Sbjct: 255 EMRIRYACRLLKETDHSVTEIALESGFNNLGNFMRTFRLVCGCTPLQYRKGL 306 >UniRef50_Q485B0 Transcriptional regulator, araC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q485B0_COLP3 Length = 304 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 35/271 (12%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 L Q+ F L++ G + ++ K+ L+ GD + +P G+ HQ F + + R+ G+ Sbjct: 31 LDQNQRAYFHLIIRGACYLQLGDKKEQLQGGDIIILPHGTAHQLFDDPSSVRVNATGVVP 90 Query: 99 RFFE----------------------------QHYLPLLPYCFVASQVYRTNNAFLTYVE 130 + ++L LP +Q +RT+ +FL Sbjct: 91 GLIDGINPFEGVGHSQDIDILCGYFNFNNSTPSYFLNALPDVIHLTQEHRTHFSFLDNAL 150 Query: 131 TVISS-LNFRETGLEELVEMVT-FYVINRLRHY-----REEQVIDDVPQWLKSTVEKMHD 183 + I+ + G E L++ VT + +R Y EE + + S ++ Sbjct: 151 SFITQETKMKNLGREILIDRVTELLFVQIMRVYININGNEENIFSALSDRTLSEALQLMH 210 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 E +E++ S+ + Y G+TPM+ ++ R+ AK+++E T ++ Sbjct: 211 TESDKNWTVESLAKAIGMSRSRFSEHFHNYIGETPMRYLHTCRMEVAKQKIEETESTLNI 270 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 I+ E GY+S S F K FKK TP ++R+K Sbjct: 271 ISEEVGYASDSAFKKAFKKFFGNTPSTFRQK 301 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 5/155 (3%) Query: 124 AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ-----VIDDVPQWLKSTV 178 AFL + L + +G + VE+ T Y + +L + + VI+ + S + Sbjct: 128 AFLNLYRDLRHELTKKNSGYQSRVEIATIYWLYKLLSLKHDSTQIHAVINSPKELSASNI 187 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + E AL+ + S+ Y+ R + Y G T + +N +RI A + LE +N Sbjct: 188 SAYLEANYTKELALDTISDELFMSKYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSN 247 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 S++D+A E G+ S S F + FKK+ + TP YRK Sbjct: 248 LSISDVAAELGFESASYFERIFKKIMTVTPLKYRK 282 >UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECN2_9CLOT Length = 334 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 28/264 (10%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 +H+HDY+E V G + V +++GD + + H + E + N+ IS Sbjct: 74 MHRHDYFEMIYVYRGGFVNVFPDHTVRMKQGDIMLLNPNILHAPYVERDDDIVFNIFISN 133 Query: 99 RFFEQHYLPL-----------LPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV 147 + +PL + Y + SQ + +L + + S+ E +EE + Sbjct: 134 PMIREKIIPLQKDNSLLISFFMEYLYFDSQ----DKKYLNFTDNSPDSILLTEKMIEEYI 189 Query: 148 EMVTFY----------VINRL-RHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALEN 194 E FY + ++L R Y + ID +P+ + + + + L++ Sbjct: 190 EQRPFYQNMTDAYLVLLFSQLSRDYYKNHSIDVLPKNHHTLSYDIINYIGQNCRSITLDS 249 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + + YL+R ++ GKT QI+++ ++ A + T+ + DI G+ S Sbjct: 250 LAKHFQYTPNYLSRLIRQSTGKTFSQIVSQQKLQRAAGFITSTDMPIVDIGQIVGFYDVS 309 Query: 255 LFIKTFKKLTSFTPKSYRKKLTEF 278 FI++FKK TP YRK + Sbjct: 310 HFIRSFKKEYHLTPAEYRKTFSSL 333 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 42/267 (15%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH--------QSFYEFGA--T 89 H H+ +E+ L + G ++N RV L+ VF+ G H ++ G Sbjct: 78 HWHEEFEYILAMKGPLTVDVNKTRVTLQTNQGVFLNSGILHAVEQAEKGEALLHSGVFHP 137 Query: 90 RILNVGISKRFFEQHYLPLL----PYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEE 145 R++ G+ F+++ P+L P F+ + + + V++ L RE Sbjct: 138 RLVG-GMDTIFWQKLIRPMLQPDAPAFFLLDEA-------VPWQAQVLACL--REAWQAV 187 Query: 146 LVEMVTFYVINRLRHYREE-------QVIDD---VPQWLKSTVEKMHDKEQFSES----- 190 VE F NR+R+Y Q + V Q + E+M +F E Sbjct: 188 AVE--PFDYENRVRYYLSAALRLLSTQCVGGKTKVSQQEQIAAERMKQMLRFVEEHYAEE 245 Query: 191 -ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +E + A A S+ R+ ++ G TP+Q + + R+ A + L T +I E G Sbjct: 246 LTVERIAASVALSESACLRSFRQMLGITPIQYVKQFRVEKAAELLRSTRLKTGEIGMECG 305 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLT 276 ++ S FIKTF+++ TPK YR K Sbjct: 306 FADGSYFIKTFREIKHCTPKEYRAKFC 332 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 61/294 (20%), Positives = 117/294 (39%), Gaps = 33/294 (11%) Query: 9 PE-IATAREQQLFNGKNFHVFIYNKT-ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 PE I T +++ F+ F + + + + GLH H++ E ++ G+ L Sbjct: 2 PEMIPTLKKEDWFHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYEL 61 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPL----------LPYCFVAS 116 GD F+ G + ++N+ F+ LPL F Sbjct: 62 VTGD-TFVIGGDRPHDYLNMDQLSLINI-----LFDPLELPLSIGDLQSLSGYHALFTLE 115 Query: 117 QVYRTNNAF--------------LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR 162 +R + F L YVE++ L R G + + ++ L Sbjct: 116 PAWRKRHQFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCY 175 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 + + L+ H + F +L+++V +S S+ R + +P++ Sbjct: 176 IRTRNPESKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKY 235 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + ++RI A + L T+ S+TDIAF+ G+S + F + F+ +P+ YRK++ Sbjct: 236 LIQVRIQEASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQM 289 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 14/246 (5%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-----QSFYEFGATRILN 93 H H YE +L G + + G LL++ D FI G H YE N Sbjct: 35 FHWHIEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKLHGGSPKDCTYE-CIVFDFN 93 Query: 94 VGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE---MV 150 + + F +L + + ++ + + T+ ++ E G E + ++ Sbjct: 94 ILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFDAIRSEEEGYELSILGSLLL 153 Query: 151 TFYVINRLRHYREEQVIDDVPQ----WLKSTVEKMHDKEQFSESALENMVALSAKSQEYL 206 F + + +Y +E+ D Q LK+++E + + L+ + S +Y Sbjct: 154 FFAALQKNEYYSKEEEYDLKSQKAIEQLKASLELIV-TDYAKPLTLQELSRECGLSPKYF 212 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 R Q Y +TP+ +N RI A Q+ + ++TDIAF G++ S FIKTFKK Sbjct: 213 CRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRCGFNDFSYFIKTFKKYKGI 272 Query: 267 TPKSYR 272 TPK Y+ Sbjct: 273 TPKKYQ 278 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/259 (21%), Positives = 115/259 (44%), Gaps = 25/259 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILNVGISK 98 H+HD++E V G ++ V+L++GD + + H + + G + N+ I Sbjct: 77 HKHDFFELIYVYQGSVINVVDAHEVVLQQGDLCIMNASAVH-TLGKLGKQDTVYNILIKP 135 Query: 99 RFFEQHYLPLLP-----YCFVASQVYRTN---------------NAFLTYVETVISSLNF 138 F Q +L L+ F + +Y+ + + TYV +I +F Sbjct: 136 ELFNQAFLGLIAENEIISSFFLNSIYQKSISRNFMTFHTQDFPSDDAETYVHRLIMENHF 195 Query: 139 RETGLEELVEM-VTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALENM 195 ++ + +E+ + I R Y+ Q + + S V ++ + + + + +++ + Sbjct: 196 KDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSIELGMSNVSQIIAYISDHYKDISIKQV 255 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 + YL+ ++Y KT +I+ IR AK+ L+ + + +I + GY++ S Sbjct: 256 ADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTAAKEYLQKLDIPINEIVYMVGYTNKSH 315 Query: 256 FIKTFKKLTSFTPKSYRKK 274 F +TFK+ TP YRK+ Sbjct: 316 FYRTFKQEMGITPAQYRKQ 334 >UniRef50_C8ZX65 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZX65_ENTGA Length = 267 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 109/243 (44%), Gaps = 16/243 (6%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF-VFIPLGSHHQSFYEFGATRILNVGIS 97 LH HDYY ++L GR + G+ +LE+GD +F P H E + IS Sbjct: 26 LHFHDYYVVGILLAGRR-KLYCGETQILEKGDLNLFNPYQPHSCQSLENQEITYHALNIS 84 Query: 98 KRFFEQHYLPL-----LPYCFVASQVYRTNNAFLTYVETVISSLNFRETGL--EELVEMV 150 K+ Q + LPY SQV NN+ VE + ++ +++ L EEL+ ++ Sbjct: 85 KQAMTQVVKEITGKKDLPY---FSQVILRNNSTGELVEELYQAILSKKSPLYREELMYLL 141 Query: 151 TFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRAT 210 + N L + E + V L V K + LEN+VAL+ + Sbjct: 142 ---IENLLAYTAEGYQNEPVENVLLENVCHHLQKNYTEDIRLENLVALTNLKKSSFIHQF 198 Query: 211 QRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKS 270 + YG TP + + IRI+ AKK L S++++A +S S F FK TPK Sbjct: 199 TKNYGMTPYRYLLSIRIDEAKKLLAKQQ-SLSEVALMTNFSDQSHFSNVFKSFIGLTPKQ 257 Query: 271 YRK 273 Y+K Sbjct: 258 YQK 260 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 9/174 (5%) Query: 109 LPYCFVASQVYRTNNA------FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR 162 L + F + YR N L Y ++ L+ + G E + + +I +LR Sbjct: 97 LCFSFNGHKEYRIFNCREKKTDLLFYFNSLFQELDRQSEGYETICSHMLDILILQLRRIT 156 Query: 163 E---EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 + E + P + +++ D L+++ LS ++ YL+ +YYG +P+ Sbjct: 157 DSPFELITAQHPSKECAHIKRYLDSNYGENITLDHLSELSHLNKYYLSHEFTKYYGISPI 216 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +N RI K+ LE T+Y ++DIA G+SS S ++F+K T +YRK Sbjct: 217 NYLNRKRIEVCKELLENTDYGISDIAHLTGFSSQSYLSQSFRKSCGMTAGTYRK 270 >UniRef50_UPI0001788EB0 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788EB0 Length = 294 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 25/266 (9%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 H F + E + H H+Y E TLVL G + + + + + GD + IP HH Sbjct: 35 HTFQAEQGEGLFQSHAHEYDELTLVLDGEGYYSSSEQNIKVAAGDLILIPARLHHG---- 90 Query: 86 FGATRILNVGISKRFFEQHYLPLLPYCF--VASQVYRTNNAFLTYVETVISSLNFRETGL 143 F TR GIS FF Y F + S+ +R ++ L + + ++F + Sbjct: 91 FVCTRPWQ-GISVHFFHDRLPVHCQYLFHEIESKPHRIRSSHLHEDDMRWAEISFYQLEK 149 Query: 144 EELVEMVTFYVINRLR-----------HYREEQV----IDDVPQWLKSTVEKMHDKEQFS 188 E + N +R RE + D+V L++ ++++H + Sbjct: 150 EWNSKRQDIDAYNMMRIAFETTLLIFQRNRETSIRAAGTDEVV--LEAILKEIHSSYH-T 206 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 + + + A S+ L R +G +P Q I +R+ AK+ L T+ ++ I+ E Sbjct: 207 QITVNELAARHFISESNLRRKFSESFGVSPKQYIINLRLMEAKRLLRQTDKAIESISAEV 266 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 G++S S F + F K TP +RK+ Sbjct: 267 GFTSSSRFYEFFTKSNGATPLEWRKQ 292 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 52/82 (63%) Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + ALS S+ Y + ++Y GKT + IN++RI AK L ++ SVT+IA E G+++ S Sbjct: 202 LTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNNTS 261 Query: 255 LFIKTFKKLTSFTPKSYRKKLT 276 FIK F++ T +P +R+ L+ Sbjct: 262 YFIKKFQQATGMSPHKFRRNLS 283 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNV----- 94 H HD+ E +V GR + G+ + GD VF+ G F E ++NV Sbjct: 42 HWHDFCELAMVTGGRGVHVLEGESFHVSTGD-VFVLQGRQVHCFRERQGLALINVMYDPE 100 Query: 95 GISKRFFEQHYLPLLPYCFVASQVYRTNNAF----------LTYVETVISSLNFRETGLE 144 + LP F+ +R+ + F L E ++ + + Sbjct: 101 RLPLPLGLLRRLPGYSALFMLEPTFRSTHRFSSRLRLARRELGSAEAIVERIENESKAAQ 160 Query: 145 ELVEMVTFYVINRL-----RHY-----REEQVIDDVPQWLKSTVEKMHDKEQFSES-ALE 193 E E V ++ L RHY RE + V Q L S +E ++F E LE Sbjct: 161 EGHEAVLLSLLVELMVLLSRHYAQSDTRESHALLQVGQ-LVSMLE-----QRFGEPWTLE 214 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + + S+ L R ++ G++P+ + +RI A++ L ++ +T+IA E G+S Sbjct: 215 QLAEQARVSRSNLLRMFRQATGQSPIDFLIGLRIEAARRLLRRSDLGMTEIALECGFSDG 274 Query: 254 SLFIKTFKKLTSFTPKSYRKKL 275 + F + F+K TP YR+++ Sbjct: 275 NFFPRQFRKTCGVTPSIYRRQM 296 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 33/265 (12%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H+Y+E V G V L +GD + + H + E + N+ +SK Sbjct: 73 HNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTEHPQDVVFNIMLSKE 132 Query: 100 FFEQHYLPLLPYCFVASQVYRTNNAFLTY---VETVISSLNFRETG---LEELVE-MVTF 152 F+ P C +++ + FL Y + + SL F + +E L++ MV Sbjct: 133 IFQSDVFP----CMTDNRL--LFHFFLDYFYQLNKLDDSLTFPHSPKHPIEPLIKLMVEE 186 Query: 153 YVINRL------------------RHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESAL 192 ++ + L R YRE D L TV + H ++ + +L Sbjct: 187 FIEDDLCYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIHLIYHMQQHLRQLSL 246 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 E++ S +++R + GK+ +++N +RI AK LE T+ + +IA G + Sbjct: 247 ESLAEAFHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEIADSIGVND 306 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTE 277 S K FKK TP YRK+ + Sbjct: 307 TSYLNKIFKKKYGLTPLQYRKQFQQ 331 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 72/278 (25%), Positives = 114/278 (41%), Gaps = 46/278 (16%) Query: 28 FIYNKTESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 ++NKT+S H H+++E +V G I+ L GD V +P S H S Sbjct: 18 LVHNKTKSCDDELPHHLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSIHCSLL 77 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQ--------------------VYRTNNA 124 + G T V S +F P L + S+ + R A Sbjct: 78 DKGKT----VTTSALYF----CPSLLASMIGSESDSLHSLFTTAKTTKQYRYYMEREKQA 129 Query: 125 FLTYV------ETVISSLNFRETGLEELVEMVTFYVI---NRLRHYREEQVIDDVPQWLK 175 FL + ET I+ L ET V ++ Y I +R +E++ VP W+K Sbjct: 130 FLAGLFDEIAKETAIADLYSGET-----VALLIRYAIVFVSRNCGTAQEKLSPLVPAWIK 184 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 ++ + D E L+ + A + Y ++ + G T ++ + R+ AK L+ Sbjct: 185 ESLAYI-DAHLHEELDLKMLAAHACVHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLK 243 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 T+ S+ IA GY S F +TF+ T TP +YRK Sbjct: 244 TTDLSIQAIAEACGYHSMPHFYRTFRAATGTTPAAYRK 281 >UniRef50_UPI00019047EB transcriptional regulator n=1 Tax=Rhizobium etli Kim 5 RepID=UPI00019047EB Length = 388 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 19/157 (12%) Query: 121 TNNAFLTYVETVIS--SLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV 178 +A T +TV +L + + GL Y++ R +Q I WL + Sbjct: 232 ARHAGATAAQTVARYFALQWHQDGLAP-------YMVFEGRRDHGDQAIQTAQDWLTA-- 282 Query: 179 EKMHDKEQFS-ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 FS + LE MV + ++ R R G +P+ + +RI AK++LE T Sbjct: 283 -------HFSVANPLEEMVRQAGLTERTFKRRFTRATGMSPIAYVQRLRIEEAKRRLERT 335 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 SV +I+++ GY P+ F + F+++T P +YR++ Sbjct: 336 EASVDEISWQVGYEEPAFFRRLFRRITGLAPGNYRRR 372 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 51/264 (19%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGI 96 S +H H + E V++G N ++ L RGD V IP + H Sbjct: 34 SIMHTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEH---------------- 77 Query: 97 SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSL--NF-RETGLEELVEMVTFY 153 ++R + H PL Y + +FL+ + + + NF + + EL + + Sbjct: 78 TERSSQNH--PLEYYVLGIDGI-----SFLSQKDRECAQVFCNFEHDPSIHELFRQMLYE 130 Query: 154 VINRLRHY------------------REEQVIDDVPQWLKSTVEKMHDKEQFSES----- 190 + R Y R +Q+I ++ T E KE + Sbjct: 131 I--RTAQYGSQTICQHLLEILILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHI 188 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L+ + L+ ++ Y+ + +Y G +P+Q +N+ R+ A+ L+ TNYS++DIA G+ Sbjct: 189 TLDTLTGLTHMNKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGF 248 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 SS S F + F+K + TP YR++ Sbjct: 249 SSQSYFTQIFRKNFNMTPVKYRQE 272 >UniRef50_C1D3S3 Putative transcriptional regulator, AraC family n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3S3_DEIDV Length = 226 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 SAL V LS S E L R R TP Q + +R + A + L + SV DIA E G Sbjct: 137 SALAAQVGLSEDSFERLMR---RVCHMTPKQFLLRVRFDAALRLLRESRRSVADIAHECG 193 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKL 275 YS S F + F+ +T FTP+ YR +L Sbjct: 194 YSDHSAFSRKFRAMTGFTPQEYRHRL 219 >UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN97_9FIRM Length = 281 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 106/260 (40%), Gaps = 45/260 (17%) Query: 39 LHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ---------SFYEFGA 88 +H+H D EF L+ G I+G+R ++GD + I H S Y GA Sbjct: 37 MHRHGDVAEFILITEGSGIHIIDGQRYYTQKGDLLLIGQDVVHDESSPANRNLSIYS-GA 95 Query: 89 TRILNVG--ISKRFFEQHYLPLL-------PYCFVASQVYRTNNAFLTYVETVISSLNFR 139 R L + + +F LP+L +C + +YR + E S+N Sbjct: 96 IRGLQLPNLPAGKFLPPDVLPVLKTEGLFPDFCHLLEFMYRGAQGKGCHPE---ESINHL 152 Query: 140 ETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 L LV VT + V+ L + V D +A + + L+ Sbjct: 153 LCALLLLVMEVTSRSV----------VLPPEEHHLLAGVRSRLD------AAYDETITLA 196 Query: 200 AKSQEY------LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 +QE+ L A + YG P+Q I RI A+ L T +T+IA GY+S Sbjct: 197 GLAQEFHVSTFHLAHAFKAAYGYAPLQYITRRRIGEAQTLLIDTALPITEIAIRTGYNSS 256 Query: 254 SLFIKTFKKLTSFTPKSYRK 273 S F K F K+T +P+ YRK Sbjct: 257 SYFNKAFHKITGMSPRDYRK 276 >UniRef50_B6VMW0 Similar to arac-family transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=B6VMW0_PHOAA Length = 322 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 14/167 (8%) Query: 113 FVASQVYRTNNAFLTYVETVISSLNFRETGLEEL---VEMVTFYVINRLRHYRE--EQVI 167 F S Y N+ + VE I N RET + + +E + + YR+ + +I Sbjct: 161 FCTSGTYEYNDVMMHIVEQ-IYGYNTRETCSQLIFGNMEGAPPHTLASFVPYRQHSDTLI 219 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + W+ S + S L N + L + + R + G+TP+Q I +IR+ Sbjct: 220 HKLQDWMHSAPSDI-----LSVGDLANKIHLCERQ---MKRRFKTATGQTPIQYIQQIRL 271 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + AK +LE +N ++ +I+ E GY F + FKKL TP YRKK Sbjct: 272 SLAKYRLEKSNKTIEEISHEVGYEDTRYFRELFKKLNGVTPIEYRKK 318 >UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GD53_GEOUR Length = 291 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/271 (21%), Positives = 107/271 (39%), Gaps = 16/271 (5%) Query: 15 REQQLFNGKNFHVFIYNKTE---SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 R F G VFI +I+ H H Y F L I GK VL + G Sbjct: 22 RYVDCFIGNEIGVFIPAVGPCFYAITPDHSHPAYSFVLTFDSYTRLAIGGKTVLSQPGQI 81 Query: 72 VFIPLGSHHQSFYEFGATRILNVGISKRFFEQ---HYLPLLPYCFVASQVYRTNNAFLTY 128 + I + H R + + I + FE+ Y + P F + + + Sbjct: 82 MAIDPDAVHHEMTADETPRYIAIFIDRDLFEKELGRYPSIRPRPF-RFRTFTPGREMMGL 140 Query: 129 VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM------H 182 ++ ++ R E L+ + +++ L + D + + ++ H Sbjct: 141 LKEFMNEAEARLPAREPLLAAIGTRIVHALIRAAHGIITPDASIGNRVEIHRVIEYIQTH 200 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 ++ S + + A++A S + +R +R G P+ +N +R+ A+K L SVT Sbjct: 201 AGKKLS---IGQLAAVAAMSTSHFSRIFKRETGHPPLAYLNRVRLEQARKLLRTGECSVT 257 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +A G++SPS F +F++ +P + K Sbjct: 258 SVALSCGFASPSHFTDSFRRFYGQSPTDFLK 288 >UniRef50_A7B562 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B562_RUMGN Length = 288 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 3/93 (3%) Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 +H E+++ + M LS + L + GKTPM+ + EIR+ A + L ++N + Sbjct: 195 LHPSEKYTPQKMAEMADLSKQRFSSLFKINM---GKTPMEYVREIRLTTAARALLVSNDN 251 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + DIA+ GY + FI+ FK FTP YRK Sbjct: 252 INDIAYACGYEDTNYFIREFKSAFGFTPNQYRK 284 >UniRef50_Q39TN8 Two component transcriptional regulator, AraC family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN8_GEOMG Length = 250 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 68/117 (58%), Gaps = 4/117 (3%) Query: 159 RHYREE-QVIDDVPQWLKSTVEKMHDKEQFSESA-LENMVALSAKSQEYLTRATQRYYGK 216 RHY + + DD+P+ + V MH K + + L+++ + S+ + R ++Y G Sbjct: 132 RHYSDPINLPDDLPESIGRAV--MHIKSNYDCALYLDDLARAAHLSKFHFCRNFKKYIGV 189 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +PM+ +N ++I+ A+ L + +++ +A++ G++ PS F + FK +T +P ++R+ Sbjct: 190 SPMRFMNMVKISKAETLLRRADLTISTVAYKLGFNDPSEFTRQFKSITGISPSAFRR 246 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 16/112 (14%) Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK----TPMQII 222 I D+ W+ + K++ + S + A S R QR + + PM+ + Sbjct: 195 IKDMLGWIDRNL-----KDEITVSGI-------AGSANICVRECQRIFSQYVHYRPMEYV 242 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 RI A + L T+ VTDIA E G+SS S FIK FK + TP YRKK Sbjct: 243 QRRRITLAAELLRTTHRQVTDIALECGFSSVSYFIKQFKNIVGCTPTGYRKK 294 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 57/97 (58%) Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 ++K D S+ ++++ LS ++ YL + +Y+G +P+ + IRI AK+ LE + Sbjct: 174 LKKYMDSNYASKITIDDLAKLSNLNKYYLIHSFNKYFGSSPINYLCGIRIRAAKELLENS 233 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +YS++ I+ G+SS S F + F K +PK+YR + Sbjct: 234 DYSISQISQSTGFSSQSYFTQCFIKSCGLSPKAYRNR 270 >UniRef50_D1T9I8 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T9I8_9BURK Length = 280 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 3/107 (2%) Query: 172 QWLKSTVEKMHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 +WL +HD+ F ++ L+ + + S ++L R +++YG T + + ++R++FA Sbjct: 169 RWLARVEALLHDR--FRDALTLDEIASDSHVCADHLAREFRKHYGCTVGEYVRQLRLDFA 226 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 QL +S+ IA +AG++ S F + F++ TP +YR +L E Sbjct: 227 CAQLTSGRHSLKAIAQDAGFADQSHFTRVFRRRMGLTPGAYRAQLLE 273 >UniRef50_C6PNM8 Transcriptional regulator, AraC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNM8_9CLOT Length = 335 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 25/263 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI-LNVGISK 98 H HDY E V +G Q I V +++G+ + + + H S E I +NV I + Sbjct: 74 HSHDYLEMMFVYSGSIKQIIEDTDVEIKKGEILLMDMNVEH-SIKEAQENDIAINVLIKE 132 Query: 99 RFFEQHYLPLLP----------------------YCFVASQVYRTNNAFLTYVETVISSL 136 FF ++ + CF S+ R + + + + Sbjct: 133 EFFNWIFMNQIADNDLISNFIVKALYNKNKFRQFLCFETSKNKRVWDFMINILIEYYENK 192 Query: 137 NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 N ET + + ++ ++ Y VI+ V + + K DK +++ L+++ Sbjct: 193 NGMETAIRSYIVLIFNELLRCYNEYLPSSVINKVESNIYVEIVKYIDK-NYNDLNLKDLA 251 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 + S +Y+ + ++ G T ++ +I+++ K L+ +++S+ +I + GYS+ S F Sbjct: 252 NYFSYSTDYMGKLIKKVTGNTLTELQKKIKLDKVKYLLKNSDFSIEEIIRKVGYSNLSYF 311 Query: 257 IKTFKKLTSFTPKSYRKKLTEFN 279 K FK+ TP YRK N Sbjct: 312 YKQFKEDVGMTPDKYRKNSITLN 334 >UniRef50_Q9KBY8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBY8_BACHD Length = 232 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Query: 184 KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 K+ FSE +LE + A+ Y + + Y G +P + + ++R+ AK+ L T +SV Sbjct: 139 KQHFSEPLSLETLAAIEHYHPAYYSSWFKGYTGMSPSEYLQKLRVKAAKRLLGETTWSVA 198 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 I+ E GY+ PS ++ F K+ TP +YR L Sbjct: 199 RISIEVGYTHPSGLVRAFTKVEGMTPSAYRNTL 231 >UniRef50_A4A7R1 AraC-family transcriptional regulator n=2 Tax=unclassified Gammaproteobacteria RepID=A4A7R1_9GAMM Length = 342 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 52/85 (61%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 ++E++ ALS S R ++ G+TP++ + +RI A+ L+ ++ + DIA+ G+ Sbjct: 237 SVESLAALSGLSPRSFGRRFRKATGETPIRYLQNLRIREARALLQHSDLPLADIAWRCGF 296 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKL 275 SSPS F + F+ T +P+++R+ + Sbjct: 297 SSPSRFSQAFRSTTDLSPRAFREAV 321 >UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D21 RepID=C0WDW3_9FIRM Length = 311 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 27/251 (10%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 +H H + V G +NG L+R +FI H S + L + K Sbjct: 57 IHWHQEMQLLWVYDGTLSYRVNGMEFPLDRSQLLFINDSILHSSHPITTEVKTLCINFRK 116 Query: 99 RFF-----EQHYLPLL--PYCF-----VASQVYRTNNAFLTYVET---VISSLNFRETGL 143 F Q PL PYC + +Q F+ +V+ + S F + Sbjct: 117 DIFPSALWNQFLRPLTENPYCTYELINLNAQSLEKLGRFIHHVDDSTGLFSVTTFIMEVM 176 Query: 144 EELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAK-S 202 EE++E TF ++ E + D + ++K + FSES + ++ +A + Sbjct: 177 EEIME--TFEESGEAKNTEERVLFDGILSFIK---------DHFSESLTISQLSTAAHLN 225 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + LT Q+Y G P+ +N R++ A+ QL + SV++I+ + GY S FI+ F+K Sbjct: 226 KNKLTALFQKYTGMPPIHFLNTYRLDEARTQLLKSARSVSEISEDVGYGQISHFIQQFRK 285 Query: 263 LTSFTPKSYRK 273 TP YR+ Sbjct: 286 RYGMTPLQYRR 296 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 33/283 (11%) Query: 20 FNGKNFHVFI----YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 F+ + +HV + Y +T + LH H EF +V G ++ +R +L GD + Sbjct: 61 FHIRAYHVVLTPGPYQQTVN---LHWHSEAEFIVVTRGSVCLQVGSERHVLADGDVALLS 117 Query: 76 LGS-HHQSFYEFGATRILNV--------GISKRFFEQHYL-PLLPYCFVASQVYRTNNAF 125 G H + G + + G S +Q YL PL + ++ Sbjct: 118 GGELHSMAAPGKGPSECKAIVFGLDLLEGPSSDRVQQSYLSPLASGKLLLPGAIAHDHPV 177 Query: 126 LTYVET----VISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ--------- 172 Y+ ++ +L + G E V+ + V+ +L +R E +++ P+ Sbjct: 178 RQYLAARLCEIVEALEEQPVGYELAVKGCLYDVLAQL--FRAELLVEHSPRREMDDRRAD 235 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 LK+ + + D + L ++ ++ S+ + R + + PMQ +NE R+ A Sbjct: 236 TLKAVLTYI-DAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAAD 294 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 L+ N S+T I + G+ S FIK F+ TP +YRK L Sbjct: 295 LLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKAL 337 >UniRef50_Q2CI77 Transcriptional regulator n=4 Tax=Rhodobacteraceae RepID=Q2CI77_9RHOB Length = 291 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + P WL D + F E A A + ++ +++R T+R+ GK+P +IIN R+ Sbjct: 178 EAPSWLARACAAAEDPKTFREGAAGFARA-AGRAHPHVSRTTRRFLGKSPSEIINAQRMA 236 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +A ++L T+ S+ +IA + G + S F K F+ TP+ YR+ Sbjct: 237 YAARRLTSTSDSLAEIAADCGIPNLSHFHKLFRSHHGVTPQRYRR 281 >UniRef50_UPI0001C37EF8 AraC family transcriptional regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37EF8 Length = 287 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Query: 185 EQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 + FSE +LE + + S+ YLTR ++ YG+T Q I +RIN+ KK L ++ S+ + Sbjct: 194 DHFSEDLSLERLSSEFYISKFYLTREYKKIYGRTIFQHIINVRINYGKKLLRFSDRSIDE 253 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 IA G++ S F + FKK + T SYRKK E Sbjct: 254 IAHMCGFNDQSYFARQFKKAENLTCFSYRKKWRE 287 >UniRef50_C7PIS8 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PIS8_CHIPD Length = 266 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 19/242 (7%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLE-RGDFVFIPLGSHHQSFYEFGATRILNVG 95 S H H F+ +L+G QEI G++ + G ++ G HQ+ + TRI N+ Sbjct: 38 SDWHYHVNPHFSHILSGGS-QEIRGRKADQQIAGAGLYYYPGIVHQNVHYRPGTRIFNLE 96 Query: 96 ISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEL-VEMVTFYV 154 I+ FF + + + P S +Y +N T I ++ L +E ++ + Sbjct: 97 IADSFFSTYNIKIPP----ESLMYESNTVLNTGGLLRILKEHYYNDDCSILSIEQLSISL 152 Query: 155 INRLRHYREEQVIDD-VPQWLKSTVEKMHD--KEQFSESALENMVALSAKSQEYLTRATQ 211 ++ VI+ P+W + + M+D E S L V + + L++ Sbjct: 153 MD------ANPVIEKHYPEWTRQIINVMNDVWNEPLSLKELAAQVNIHPVT---LSKYFT 203 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 +Y+ T + +I+++ A + YS+T+IA+ +G++ + F KTF+++T PKSY Sbjct: 204 KYFSCTLGEYFRKIKVDRALSLIRSQKYSLTEIAYMSGFTDQAHFTKTFQQITGMLPKSY 263 Query: 272 RK 273 RK Sbjct: 264 RK 265 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 53/83 (63%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 LE + +++ S+ Y++ + ++ G +PM+ + IRI +K L TNYS++ +A G++ Sbjct: 194 LEALASMTHLSRFYISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFT 253 Query: 252 SPSLFIKTFKKLTSFTPKSYRKK 274 +P+ F K F+K+T +P YR+K Sbjct: 254 TPTYFSKQFRKITGISPTDYREK 276 >UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35507 Length = 307 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 35/265 (13%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR---ILNV 94 LHQH+ E + + Y N LE G+ +FIP + H+ R + N+ Sbjct: 44 ALHQHNAIEILVPIENSYTVLANNHTYQLEPGNILFIPGLTLHEIMKPDWGERFIFMFNM 103 Query: 95 GISKRFFEQHYLP--LLPYCFVASQ----VYRTNNAFLTYVETVI--SSLNFRETGL-EE 145 F + L LL CF+ + +Y + L + T+ SS+ FRE + Sbjct: 104 DPLTSFHDYSSLEPVLLDPCFLTKRTTPGIYEHIYSRLMEISTLYFSSSITFREYSIYAN 163 Query: 146 LVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD------------KEQFSES-AL 192 L++++T I R + D + ++T EK +D + F+E L Sbjct: 164 LIDILT--TIGR-------EYYDALFAGTENTAEKSYDYYQKFNSLLSYINDHFAEPLTL 214 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 E M + S+ + TR +++ T ++ RI A + L T+ S+T IAF+ G+++ Sbjct: 215 EKMADYTGFSKYHFTRLFKQHTNSTFYDYLSRKRIQ-AAQTLLTTDASITSIAFQTGFNN 273 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTE 277 + F + FKK T+++P YR K E Sbjct: 274 STSFTRCFKKYTNYSPSEYRTKFIE 298 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 15/248 (6%) Query: 39 LHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +HQH D E LV GR I+ L GD +F G H G +G+S Sbjct: 1 MHQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGVS 60 Query: 98 ------KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVT 151 +R E P + +Q F T V+ ++ +++ +T Sbjct: 61 DFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAG------DAPCVLDQLT 114 Query: 152 FYVINRLRHYREEQVIDDVPQW--LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 ++ +L PQ L TV+ D L+++ A + YL A Sbjct: 115 CAILCKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHA 174 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 + + G +PMQ I RI A+ L T+ S+T+IAF GY++ + F FK+L TP Sbjct: 175 FREHIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPG 234 Query: 270 SYRKKLTE 277 YR+ + Sbjct: 235 QYRRDWVQ 242 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 50/82 (60%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 + ++ L +++Y R ++ G++PM+ +NE RI A L+ ++ +VT+I E GY+ Sbjct: 223 IRDLAGLIGMNEQYFCRFFKKVIGRSPMEYVNEYRIKRAIHYLKESDLTVTEICLECGYN 282 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 + F++ F+K TS TP YR+ Sbjct: 283 NLGNFLREFRKYTSTTPLQYRR 304 >UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAQ5_9CLOT Length = 329 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 30/264 (11%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HDYYE V G + V+L +GD + + H + N+ +S+ Sbjct: 68 HNHDYYEMVYVYRGGCVNNFRDQEVILSQGDVLLMNPNVLHSIHTLREEDCVFNIMLSRS 127 Query: 100 FFEQHYLPLLPYC-----FVASQVYRTNNA--FLTY-------VETVISSLNFR-----E 140 FE+ L LL F+ S +Y+ N + FL + V+ ++++L + Sbjct: 128 LFEESMLLLLSDNKLLSNFIVSYLYQINTSQEFLYFPSPKNEQVDDIVTNLIYEFSDRGP 187 Query: 141 TGLEELVE---MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM----HDKEQFSESALE 193 TG +V+ V F ++ R+ + + Q+ D+ L ++ + + S + LE Sbjct: 188 TGSASVVQHLLAVLFSLLARI-YAEQNQIHTDMHTKLSPLLDIISYINQNSRTVSLAVLE 246 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + SA Y++R +++ G++ Q++ ++ A++ L+ T SV +A EAG+ Sbjct: 247 EKFSYSAG---YISRLIKQHCGQSFTQLVQNAKLQRAREILKNTGTSVVQVAEEAGFQDS 303 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTE 277 F + FK+ TP YRK E Sbjct: 304 QYFSRLFKEKFGLTPSQYRKLCQE 327 >UniRef50_A8GCV2 Transcriptional regulator, AraC family n=18 Tax=Gammaproteobacteria RepID=A8GCV2_SERP5 Length = 281 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 ALE + AL+A S + R +R + TP Q+I+++R+ A +L ++ +TDIA + GY Sbjct: 196 ALEELTALTALSVAQIERYCKRIFHLTPRQMIHKVRLEKAT-ELLASDLPITDIALQCGY 254 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLT 276 + S F + FK +T TP+ +R +T Sbjct: 255 TDHSAFSRQFKAMTGSTPRDFRISIT 280 >UniRef50_B1MLH4 Probable transcriptional regulator, AraC family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MLH4_MYCA9 Length = 269 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 27/226 (11%) Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYL-PLLPYCF-----VA 115 +R L + GD + +P+GS + I R +Q L P + Y +A Sbjct: 59 RRYLPKVGDVLVVPMGSRAAITTQGERASFCRFDIPTRLLDQRDLQPRVAYSDPLILQLA 118 Query: 116 SQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLK 175 S++Y + VI+ L RE+ L ++V ++ + HY + + + L Sbjct: 119 SRMYSVADR-----TDVIARL-LRES----LADVVRLHLSD---HYAALRPRPERRRLLD 165 Query: 176 STVEKMHDKEQFSESALENMVALSA------KSQEYLTRATQRYYGKTPMQIINEIRINF 229 S ++ ++ E L+ ++LSA S +A +G TP Q + + R++ Sbjct: 166 SAMQAR--VTEYIEDGLDADISLSALAGHAQMSTSEFRKAFTEVFGHTPYQFVLDRRMSR 223 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 AK+ L T+ SVTDI+ G+SSPS F TFK TP +YR + Sbjct: 224 AKQLLATTDLSVTDISVAVGFSSPSHFATTFKTRIGVTPTAYRSGV 269 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 33/275 (12%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH--- 80 +F +F Y E + H H YE T++L + + E GD V + H Sbjct: 15 SFRIFGYEVKEFDAPWHYHPEYELTVILQSEGIRYVGNSMESFEAGDLVLLGPNLPHCWK 74 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFV------ASQVYRTNNAFLTYVETVIS 134 + G + V F +L + + + A+Q R N V +++ Sbjct: 75 NTPDSVGPASSIVVQWPAEFMGSGWLNVEEFKSIRRLLQLATQGVRFNQEVSARVLPMLA 134 Query: 135 SL----------NFRETGLEELVEMVTFYVI-----NRLRHYREEQVIDDVPQWLKSTVE 179 ++ F E LE L + + +++ +Y + Q I+ V +++ Sbjct: 135 AMLDMQPFPRLMKFLEI-LELLATVKSIHLLCEQGFTHPLNYEDNQRINTVYNYIRE--- 190 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 H E+ + + L +V +S +E +R R K +NE RIN A K L T+ Sbjct: 191 --HYAERITLATLAGLVHMS---EESFSRFFSRTMQKPLFTFLNEYRINMASKMLIETDM 245 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 V +I+F GY SP F + F+K TP +YR + Sbjct: 246 QVAEISFACGYESPPFFFRQFRKFGGITPAAYRNQ 280 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 61/93 (65%), Gaps = 1/93 (1%) Query: 184 KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 K+ F E+ +L+ + ++S ++ YL+ + +++ G +P++ + + RI +K LE TNYS++ Sbjct: 181 KQHFHENISLDTLASISHINKYYLSHSFRKFVGVSPIEYLIQTRIRESKILLETTNYSIS 240 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +I+ G+SS S F ++FK+ T+ +P YR + Sbjct: 241 NISTITGFSSQSFFAQSFKRETNLSPSQYRNAI 273 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 3/127 (2%) Query: 149 MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD--KEQFSES-ALENMVALSAKSQEY 205 M++ +++N LR ++ + + L K+ + +SE+ LE + LS ++ Sbjct: 155 MLSLFILNILRTIPSMSILQNEKKNLNLECAKIKNYLDSHYSENITLETLSNLSYMNKFS 214 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L A + G +P+ + E RI AK LE TNYS+ DI G+S+ S F + FKK T+ Sbjct: 215 LVHAFTKQIGMSPISYLIEKRITEAKSLLETTNYSIKDIGSIVGFSNSSYFSQMFKKQTN 274 Query: 266 FTPKSYR 272 +PK Y+ Sbjct: 275 LSPKQYK 281 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 35/258 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H+ E VL+G E + L++G +F+ G+ H+ R+ NV S Sbjct: 33 HSHEAAECMHVLSGSCKVETDEGSYQLKKGQIIFLDAGTRHRLIVS-ERCRMFNVEFS-- 89 Query: 100 FFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETG-----LEELV------- 147 FEQ P+ ++ + N A V S L +T L L+ Sbjct: 90 -FEQGCTAFPPF----FKLCKENRALGNMVNKQASQLLLHDTDDTYQCLRRLILEVDKKS 144 Query: 148 EMVTFYV-------INRLRHYREEQVID-DVPQWLKSTVEKMH---DKEQFSESALENMV 196 E F V + R+ E +V + D ++K + +H D+E S + + N V Sbjct: 145 EQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKRALAYIHQNYDRE-VSVADIANSV 203 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 L YL R + + GK+ + + RIN AK L+ T+ S+TDI G +S F Sbjct: 204 HLHPG---YLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDIPHYIGMNSQQYF 260 Query: 257 IKTFKKLTSFTPKSYRKK 274 TFKK TP YRK+ Sbjct: 261 STTFKKHVKCTPSEYRKR 278 >UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulatory protein n=15 Tax=Bacilli RepID=Q4V1B1_BACCZ Length = 301 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 16/112 (14%) Query: 184 KEQFSESALENMVALS----------------AKSQEYLTRATQRYYGKTPMQIINEIRI 227 K++FS A+E M+ + A ++ +L+R Q ++G + I +RI Sbjct: 167 KQKFSRLAIEAMIYIGKHYIEEITVSDVANHLAVNRSHLSRVFQNHFGISMKDWIIRMRI 226 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 N A L MTN SV +I+++ G+ S + F + FKK+T TP YRK++++ N Sbjct: 227 NHAAYLLSMTNESVENISYQVGFHSLAAFSRIFKKVTKETPTHYRKRMSKDN 278 >UniRef50_Q21KB5 Transcriptional regulator, AraC family with amidase-like domain n=2 Tax=Alteromonadales RepID=Q21KB5_SACD2 Length = 330 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 8/100 (8%) Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 WL+ K E L ++ L + S TR + G+TP+ + IRI+ AK Sbjct: 229 WLRDNFAK--------EIKLNDVAQLFSMSPRTFTRRFKSATGRTPLHYLQNIRIDVAKD 280 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L+ +N SV++I F GY P+ F FKK TP YR Sbjct: 281 LLQTSNLSVSEIMFRVGYHDPTHFTNLFKKSLGVTPSQYR 320 >UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9G4_9BACT Length = 261 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 19/248 (7%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL 92 +E + +H H+ E LV+ G + GK + G + +P G H+ + + R+ Sbjct: 15 SEKPTSVHSHNGTEIILVVHGECVNVLPGKEQHAKAGSVIVVPAGMSHR---QLNSGRVT 71 Query: 93 NVGISKRFFEQHYLPLLPYCFVASQV---YRTNNAFLTYVETVISSLNFR-ETGLEELVE 148 V + FE CF S + + + E ++S R + + L+ Sbjct: 72 TVYV---IFEAQQ-----ECFDCSARILDVKGDRYAPGWFEQIVSLKTARLDREADRLLG 123 Query: 149 MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTR 208 ++ Y+ R + E + +E+ +++ S + + N +S L R Sbjct: 124 VLLSYLTGRENRLQREGGRSPAAARAMAYLEENYNR-NISVAEVANACGVSPSHLHLLFR 182 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 R + ++P+ +N IR+N A++ L S+ +I F+ G++ P F + F+K+ TP Sbjct: 183 ---REFSESPLASLNRIRMNRARQLLLNCYLSIGEIGFQCGFNQPHYFCRAFRKIHGCTP 239 Query: 269 KSYRKKLT 276 YR L Sbjct: 240 GEYRVALN 247 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 10/244 (4%) Query: 39 LHQHDY-YEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +H+HD+ E LV G I+G+R ++G+ + + H F G + ++ I+ Sbjct: 1 MHEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSG-SNLVTYCIA 59 Query: 98 KRFFEQHYLP---LLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYV 154 LP LLP + Q R + A V+++ ++ E+ +T + Sbjct: 60 IGGLRIDGLPADHLLPDGYCPVQPLRQHFA---EVQSLFDAIEKEAKSHAEIANYLTMAL 116 Query: 155 INRLRHYREEQVIDDVPQW--LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQR 212 I +L + E+ + + Q L + DK L ++ + + YL+ + Sbjct: 117 ITKLAAFLREEGLQEEQQTPTLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHLFKA 176 Query: 213 YYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 G +PM+ + RI A+ L T+ ++T IA + GY++ + F FK TP YR Sbjct: 177 EIGLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPGEYR 236 Query: 273 KKLT 276 +K T Sbjct: 237 RKWT 240 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 4/145 (2%) Query: 135 SLNFRETGLEELVEMVTFYVI--NRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 SL+ ET ++L+E++ +++ L EE D + ++ +++ D E +L Sbjct: 165 SLDGCETVCQDLLEVLLIWLVRCTTLSLQVEESPRSDNRECVE--IKRYLDNNYREEISL 222 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + + ++ ++ YL Q+ YG +P+ +N RI +K L T YS+ I+ G+SS Sbjct: 223 DTLAEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSS 282 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTE 277 PS F + F+K TP YR+++ + Sbjct: 283 PSYFSQCFRKAEGLTPNEYRRQVRQ 307 >UniRef50_C7PA24 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PA24_CHIPD Length = 292 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 30/279 (10%) Query: 17 QQLFNGKNFHVF-IYNKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 Q+L +G+ + ++ +S + H+HD+YE LV G IN K+ ++ G FI Sbjct: 18 QELLDGEYMRIVRLHKDINHLSVIPHRHDHYELMLVTAGTGTHAINFKKFGIQPGRLYFI 77 Query: 75 PLGSHH--QSFYEFGATRILNVGISKRFFEQHYLPLLPY--------CFVASQVYRTNNA 124 G H F G + + KRF + H P+ F + + Sbjct: 78 HPGQVHLIAPFDRDGWLIMFGEELFKRFLKIH-----PHEDGRGLLDAFASGPYIDLHPQ 132 Query: 125 FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE-QVIDDVPQWLKSTVEKMHD 183 + +I L TG + V+++ YV L Y ++ Q+ +PQ + E +H Sbjct: 133 LSLVTDFIIEQLCIALTGTKPDVDIILHYVSLLLLQYNQQHQLQHPLPQASLAQRELLHK 192 Query: 184 KEQFSESALE---------NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 +Q E N + K + RA+ G T +++ E + +K L Sbjct: 193 LKQRIERNFRQEHQAAFYANHLRTDIKKLNNICRAST---GLTVFELLQERLVTESKILL 249 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + + +V +I+++ G++ P+ F + FKK T TP ++R+ Sbjct: 250 QTSVQTVKEISYDLGFNDPAFFGRFFKKHTGLTPAAFRQ 288 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%) Query: 185 EQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 E ++E +LE + +L+ S+ + TR ++Y T + +N+ RI AK L N SV D Sbjct: 192 EHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLLVDKNLSVLD 251 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 I+ + G+S+ S F++ F+KLT FTP RK Sbjct: 252 ISLQCGFSNLSSFLRMFRKLTGFTPTELRK 281 >UniRef50_C8NDY5 AraC family DNA-binding response regulator n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NDY5_9LACT Length = 512 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 3/96 (3%) Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H KE S S L +MV LSA ++L R ++ G+T ++ I + RIN +K+ L T + Sbjct: 420 HYKEDLSRSTLADMVYLSA---DHLARIFKKETGETLVKYITDKRINASKELLSETKTPI 476 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 +A E GY + S F K FK+ +P YRK+ T+ Sbjct: 477 AQVASEVGYDNYSYFTKIFKEKIGVSPGDYRKQHTD 512 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 16/157 (10%) Query: 129 VETVISSLNFRETGLE-----ELVEMVTFYVINRLRHYRE-EQVIDDVPQWLK-----ST 177 + VI ++ +E G E L+ M+ +++ R HY+ E D+ + + S Sbjct: 131 AKAVIDAMLEKEPGYEFTVPGRLLCMLG-HIVARQEHYQSGETAASDIKKVRRFKNVISY 189 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 +E+ + K LE + ++ Y RA + Y GKTP++ +N RI A + + T Sbjct: 190 IEQNYRKN----ITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIAST 245 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + + DIA + G++ S FIK FK + TP+ Y ++ Sbjct: 246 DEKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRR 282 >UniRef50_D1CGI0 Transcriptional regulator, AraC family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGI0_THET1 Length = 278 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 53/92 (57%) Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 D++ +E +LE+M A + S EYL R + Y G +P+ + R++ A L +NY++T Sbjct: 171 DEDPSAEISLEDMAAHAGVSPEYLCRLFRSYTGLSPLGTVRICRLDRAAMLLLRSNYTIT 230 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 I+ G+SSP F + FK+L +P RK+ Sbjct: 231 QISRIYGFSSPFHFSQRFKELYGKSPSQLRKE 262 >UniRef50_UPI000178960C transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178960C Length = 743 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 3/117 (2%) Query: 157 RLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK 216 RL R + ++ Q +K+ +EK + K + S L++ +S K YL+R + YG Sbjct: 628 RLDTQRNLRSQGNLVQEVKAYIEKHYTKAELSLDYLQDKFGISGK---YLSRLFKEEYGL 684 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + + ++RI AK+ L + SV +I GYSSP F +TFKK+T P YRK Sbjct: 685 KFVDFLIDLRIQEAKRLLTESALSVQEITERVGYSSPISFARTFKKITGVPPMDYRK 741 >UniRef50_C6CRE4 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CRE4_PAESJ Length = 267 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 35/256 (13%) Query: 44 YYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS----------HHQSFYEFGATRILN 93 Y+ LV G+ ING+ ++ ERGDF++IP + HQ + T + Sbjct: 25 YHVLVLVTDGKVKYTINGQEIIAERGDFLYIPQSTLRSGDTIPAIPHQKYTVLITTEPGS 84 Query: 94 -VGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRE---TGL-EELVE 148 +GI FF+Q F S ++ F+ E + +FR GL +ELV Sbjct: 85 KLGIP--FFDQGEF----IRFRLSNLHYMQRRFMKLFEEMRGGRSFRSYICLGLTQELVG 138 Query: 149 MVTFYVINRLRHYREEQVIDDVP-QWLKSTVEKMHDKEQFSESA-LENMVALSAKSQEYL 206 ++ RE + + P + L + + K + + + E +E + L +S Y Sbjct: 139 LLA----------RELEKPEVTPAKMLYAQLVKQYLLDHYREHVEIEQLGELIHRSPNYT 188 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 T + +G++P++ ++++R+ A + L ++ +V DIA GY PS F + FKK Sbjct: 189 TALFKEVFGQSPIRYMHQLRLLEACRLLLHSDMTVADIAQYLGYYDPSYFFRMFKKHVGL 248 Query: 267 TPKSY--RKKLTEFNQ 280 +P + R ++ + +Q Sbjct: 249 SPSEFITRGRMEDLSQ 264 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 5/241 (2%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNVG 95 S LH H Y E V G ++ K ++ D V + PL SH + E + +G Sbjct: 47 STLHTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLISHTERGIENVNFEYIVMG 106 Query: 96 ISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE-MVTFYV 154 I + C +A+ Y + L Y++T++ + ++T + L + ++ + Sbjct: 107 IEGVTYFSKEEDEEQGCSIAN-YYEYKHEVLFYLKTILFEVKTKDTEYQSLCQNLLEVLL 165 Query: 155 INRLRHYREEQVIDDVPQWLKSTV--EKMHDKEQFSESALENMVALSAKSQEYLTRATQR 212 IN +R + + K V EK D + L+ + L+ ++ ++ A ++ Sbjct: 166 INLMRRANINLKSSPINKANKDCVLIEKYIDAHFKEDITLDTLSELTFLNKYHIVHAFKQ 225 Query: 213 YYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 Y G +P+ + + R+ AK L TN +++IA+ G++S S F + FKK T +P YR Sbjct: 226 YKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQSYFAQAFKKATLTSPLQYR 285 Query: 273 K 273 K Sbjct: 286 K 286 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 24/272 (8%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 +N +Y + H H + E G ++NG+ + GDFV I H + Sbjct: 12 RNLPFSVYIAQDEKFSWHCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVIIHTMEDH-T 70 Query: 83 FYEFGATRILNVGISKRFFEQHYLP------LLPYCFVASQVY--RTNNAFLTYVETVIS 134 ++L V + + + P L+P+ S Y R + +E+++S Sbjct: 71 LIRNSDCKLLGVQMDLSVLDTAFSPFYESQYLVPF-IRGSGKYQRRIRVPKGSLLESILS 129 Query: 135 SL----NFRETGLE-----ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKE 185 + ++ G E +++ + + V ++ E V + +K ++ M E Sbjct: 130 EILVEYQKKQPGYEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDYM---E 186 Query: 186 QFSESALENMVA--LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 Q E+ L A ++ S + R ++ GKT ++ N IRI A+K L T+ ++T+ Sbjct: 187 QHIETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTITN 246 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 IAFE G+ S + F + FKK T P +YRKK+ Sbjct: 247 IAFETGFGSVAYFNRVFKKETGQAPANYRKKM 278 >UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5 Length = 377 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 10/127 (7%) Query: 154 VINRLRHYREE----QVIDDVPQW-LKSTVEKMHDK--EQFSESALENMVALSAKSQEYL 206 ++ LRHYR+ + + +P + L+ + M+++ E+FS +AL +V LS + + Sbjct: 253 AVHLLRHYRDPHGGVRRSNALPAYKLRKVIGVMNERLAEEFSLAALAQVVELS---EYHF 309 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 +R +R G +P Q +R+ A++ L T S+ DI E GYSSPS F + F++ Sbjct: 310 SRMFKRATGLSPSQYFIGLRMARARQLLLETPRSIIDIGLEVGYSSPSHFSQVFRREVGV 369 Query: 267 TPKSYRK 273 TP YR+ Sbjct: 370 TPSIYRQ 376 >UniRef50_B1MCK7 Putative transcription regulator, AraC family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MCK7_MYCA9 Length = 364 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 10/120 (8%) Query: 153 YVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQR 212 YVI R R E + ++ W++ + E +LE++ ++ S L R + Sbjct: 247 YVIRNRR--RAEVSLGEILAWIEHNAHR--------ELSLEDLATEASTSVRSLNRRFRA 296 Query: 213 YYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 G+TPMQ + +R+ A++ LE + SV I E G+ SP+ F + F++LT +P +YR Sbjct: 297 ETGQTPMQWLTGVRVRHAQQLLERSADSVEWIGREVGFGSPANFREQFRRLTGVSPLAYR 356 >UniRef50_Q4A0B7 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0B7_STAS1 Length = 293 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 27/255 (10%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ-----SFYEFGATRILN 93 +H H +F VL G+ I+ K ++L GD +FI H+ EF I Sbjct: 41 IHWHSALQFVFVLRGKLTIRISDKNIVLNTGDGIFINSNVVHEIQGLEHISEFYCWNIEI 100 Query: 94 VGISKRFFEQHYLP-------LLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEL 146 IS + E YL ++PY +++ + +++A L +E+V ++ ++ +L Sbjct: 101 PNISS-YMEYKYLSYISQQAEMVPYIYLSHKN-LSHHALLACIESV-GTIYQKQEAYFQL 157 Query: 147 VEMVTFY-VINRLRHYREEQV------IDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 M FY ++ L Y ++Q D + + S + K H +++ + L + LS Sbjct: 158 DIMTYFYKIVKWLMQYMKQQPTELTYHFDYRVKQMMSYIHK-HFQDKITLGHLSQNIYLS 216 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS-VTDIAFEAGYSSPSLFIK 258 R ++Y +TP + + R+ +K L+ S +T+IA G+S+ S FIK Sbjct: 217 EAEA---IRLFKKYVKQTPFEYLLRYRLEQSKSILDKDRLSTITEIAMACGFSTTSYFIK 273 Query: 259 TFKKLTSFTPKSYRK 273 FK TPK Y+K Sbjct: 274 VFKARYGMTPKQYQK 288 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 16/249 (6%) Query: 34 ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF-VFIPLGSHHQSFYEFGATRIL 92 +++S H HDY+E + G F I + + G+F +F P HH E + L Sbjct: 18 DNMSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRL 77 Query: 93 NVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSL--------NFRETGLE 144 V SK E + LL + VY+ + V ++ L + E + Sbjct: 78 LVYFSKE--EVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYIH 135 Query: 145 ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 L+ M + + + V + + + +H Q + +++ + +S S Sbjct: 136 TLLNMALLTIARNI----QTPVKPEKRNRITDVISYIHQNYQ-EDISIDQLAQMSYVSPY 190 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 YL R +RY T +Q +N R+ A++ TN ++T+I+ + G+S+ + F + FK + Sbjct: 191 YLCREFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVM 250 Query: 265 SFTPKSYRK 273 TP ++RK Sbjct: 251 GMTPSNFRK 259 >UniRef50_B0MSM8 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSM8_9BACT Length = 258 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 45/62 (72%) Query: 215 GKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 GKTP + + E+RI A + L+ ++ + + IA+E+G++S +LF++ F+++T TP YR++ Sbjct: 188 GKTPFEYLAEMRIGHAVRLLKHSDLTCSQIAYESGFNSYALFVRQFRRITGMTPDRYRRE 247 Query: 275 LT 276 ++ Sbjct: 248 IS 249 >UniRef50_C3HF38 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar pulsiensis BGSC 4CC1 RepID=C3HF38_BACTU Length = 312 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L M +S S + +A+ G + Q I R+ +A + L TN S+T+I+ + GY Sbjct: 225 LAEMANMSESSMQSYFKAS---LGMSVYQYIQRKRVEYAAELLIHTNESITEISMQVGYD 281 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 +PS F K FK++ TP YRKK TE+NQ Sbjct: 282 NPSKFAKIFKRIYGETPLHYRKKYTEYNQ 310 >UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368B4 Length = 289 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 44/74 (59%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S + R+ ++Y G P+Q + IRIN AK+ LE T+ V++I GY +P F + FK Sbjct: 209 STCWFIRSFKQYVGVPPLQYLTSIRINKAKELLESTDCPVSEIGSIIGYENPLYFSRIFK 268 Query: 262 KLTSFTPKSYRKKL 275 K T +P +YRK L Sbjct: 269 KQTGLSPAAYRKVL 282 >UniRef50_B0A8H8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8H8_9CLOT Length = 289 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 48/86 (55%) Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 E +E M L+ S+ Y A ++ G+TP + +IRI+ AK LE T+YS++DIA + Sbjct: 199 EIKIEEMAQLAGLSKNYFGSAFKKALGETPHSYLIKIRISKAKVLLETTDYSLSDIAQKI 258 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 G+ S F FK T P YR+K Sbjct: 259 GFKKASSFTSQFKASTGIIPSKYREK 284 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 51/87 (58%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L+ + +L+ ++ Y+ + +Y G +P+Q +N R+ A L T++SV+DIA G+ Sbjct: 189 TLDTLTSLTHMNKYYMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGF 248 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLTE 277 SS S F ++F+K TP YR++ E Sbjct: 249 SSQSYFTQSFRKYYGMTPLQYRQQNAE 275 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 32/258 (12%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE---------FGATR 90 H HD +E + G ++GK L F+F+ GS H E F + Sbjct: 37 HWHDEFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDNPEPYAIVFSLSM 96 Query: 91 ILNVG--ISKRFFEQHYLPLLPYCFVASQVYRTNNAF-----LTYVETVISSLNFRETGL 143 + + G I K + Q V+ + N+F + +I+ + G Sbjct: 97 LFSEGPDICKSKYLQS---------VSERKLLVQNSFEDEHTRELISNIITVWKEKPKGY 147 Query: 144 EELVE----MVTFYVINR--LRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVA 197 E LV+ ++ +Y+ N+ + ++ +D + +KS ++ ++ S+ ++ + Sbjct: 148 ELLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYS-SDIDIDLLAK 206 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 L+ S+ Y R + TP+ IN+ R+ A + ++ TN S+++IAFE G+++ S FI Sbjct: 207 LANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFI 266 Query: 258 KTFKKLTSFTPKSYRKKL 275 K FK+ TP Y+K + Sbjct: 267 KVFKEYVGVTPFKYKKNV 284 >UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K3_PAESJ Length = 296 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 6/99 (6%) Query: 180 KMHDKEQFSESALENMVALS------AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 K+ + + ++ ENM++L + S+ +L R R G +P +N++RI A + Sbjct: 184 KVKEAVSYIDAHYENMISLDQLADQLSLSKYHLLRLFTRTVGMSPNDYLNQVRIKEAIRL 243 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L+ +++SV IA + GYS S FIK F+K+T TP S+R Sbjct: 244 LKESDWSVERIAEQVGYSGGSYFIKWFRKITGETPGSFR 282 >UniRef50_C0EDI9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI9_9CLOT Length = 369 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 24/260 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEIN-GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 H HD++E V TG EI+ ++V L++ + + + H+ + I N+ +S+ Sbjct: 112 HFHDFFELIYVHTGSLRNEIDYTEQVQLDKNHVLLLNPNARHRLLCDDPQAVIFNLMLSR 171 Query: 99 RFFEQHYLPL-----LPYCFVASQVYRT-----------NNAFLTYVETVISSLNFRETG 142 F E L L L + F + +Y N A ++ +I R+ Sbjct: 172 SFVEHTLLSLFDEDNLIFYFFLNSIYGGDRIRSFLYLPLNPAVEQRIQCIIKEHCDRQPL 231 Query: 143 LEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD-----KEQFSESALENMVA 197 ++++ + +E++ DV L + + D + F+ + L + Sbjct: 232 CQQMIAANLLMLFGEFARLHKEEL--DVESELLAQSSDIGDILRYLRLNFATATLASTAR 289 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S+ Y +R +R GK ++++EIR+ A L+ ++ V I+ GY +P+ F Sbjct: 290 KFNYSESYFSRMIKRQTGKRFTELLSEIRLETACNYLKNSDLPVEKISEIIGYQNPANFF 349 Query: 258 KTFKKLTSFTPKSYRKKLTE 277 + FKK + +PK +R++ E Sbjct: 350 RLFKKHLATSPKDFRRQYRE 369 >UniRef50_Q11HY1 Transcriptional regulator, AraC family with amidase-like domain n=4 Tax=Proteobacteria RepID=Q11HY1_MESSB Length = 361 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 46/83 (55%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E M+ S ++ R G +P+ + +RI AK++LE T SV +I+++ GY Sbjct: 252 IEEMIRRSGLTERTFKRRFTSAAGLSPITYVQRLRIEDAKRRLERTEVSVDEISWQVGYE 311 Query: 252 SPSLFIKTFKKLTSFTPKSYRKK 274 P+ F + FK+ T P +YR++ Sbjct: 312 EPAFFRRLFKRFTGLAPGAYRRR 334 >UniRef50_UPI000174610C response regulator receiver domain protein (CheY-like) n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174610C Length = 280 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%) Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 E LE++ S E+L R QR G++PMQ + +R+ A++ LE T+ V +A E Sbjct: 195 EWTLESLARAYHSSGEHLRRVCQRELGRSPMQHLTYMRMQRARQLLETTSDKVEVVAGEV 254 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 GY +F + FK+ P YR++ Sbjct: 255 GYRDGLVFSRAFKRWVGCAPSEYRRR 280 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 115/256 (44%), Gaps = 20/256 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS-HHQSFYEFGATRI------- 91 H H+ E LVL+G + +IN + GD + I GS H+ S E ++ Sbjct: 36 HWHNEIELILVLSGEFNLKINTDSYTCKDGDIILINSGSLHYFSTKENESSTWNSIVFNM 95 Query: 92 --LNVGISKRFFEQHYLPLLPYCF----VASQVYRTNNAFLTYVETVISSLNFRETGLEE 145 LN I P++ F + + NN + +I + N + G E Sbjct: 96 DQLNSNILDNCSVNFITPIINNEFKLPVIIHKDSLINNELKCIILNIIDTYNSKYYGFEL 155 Query: 146 LVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-----HDKEQFS-ESALENMVALS 199 ++ + F + L + + + + +EK+ + +E ++ E + + A+ Sbjct: 156 EIKSLIFKYFSLLFKFNLVKKKTNNTCLNEEKIEKIKIVLEYIQENYNKEIDINRLSAIC 215 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 +Q + R +++ GKT +Q I R+ A + T+ S+T+I+ E G+++ S FI++ Sbjct: 216 HYNQSHFMRFFKKHTGKTCIQFIKNYRLEKAASLISNTDLSITEISLEVGFTNISYFIRS 275 Query: 260 FKKLTSFTPKSYRKKL 275 FK+ + TPK ++ +L Sbjct: 276 FKEKYNTTPKGFKTRL 291 >UniRef50_UPI0001C365A9 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C365A9 Length = 116 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 41/68 (60%) Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 YL R +++ KTP + IN+IRI AK LE TN S+ I E G+ + S F FKK T Sbjct: 41 YLCRVFKKHLNKTPTEFINDIRIANAKLALEYTNRSILQICEEVGFDNTSHFYHLFKKDT 100 Query: 265 SFTPKSYR 272 +PK++R Sbjct: 101 GLSPKAFR 108 >UniRef50_A7LYG4 Sensor protein n=7 Tax=Bacteroides RepID=A7LYG4_BACOV Length = 1317 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 7/115 (6%) Query: 160 HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 H +E++I +V ++K+ + D E S S++ V +S + L R + KTP Sbjct: 1210 HPEDEELIQNVTDFIKNNI----DDELLSPSSIAEFVGVSKAT---LYRKFKEIIDKTPS 1262 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + + IR+ +A K L T +V++I F+ G+S+ S F + F K +PK YR + Sbjct: 1263 EFVRGIRLEYAAKLLRTTKLTVSEIMFKCGFSNKSYFYREFLKQYGVSPKDYRNQ 1317 >UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S939_9FIRM Length = 291 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 8/144 (5%) Query: 131 TVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSES 190 + + S+ L E++ + ++ + QVI + T+ K + KE + Sbjct: 147 STVDSMVTTGLALHEMLALCARSILAQAEATSARQVILQAAE----TLSKNYQKELY--- 199 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L +++A + S+ Y R +RY G TP + RI AK+ L +T++SV++IA E G+ Sbjct: 200 -LADLLAEAHMSKSYFLRLFRRYMGTTPYNYLVNFRITQAKELLVLTDHSVSEIAQEVGF 258 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 S F F K T +P YRK+ Sbjct: 259 GDASNFSTRFAKATGQSPLQYRKR 282 >UniRef50_B9QTE2 DJ-1/PfpI family n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QTE2_9RHOB Length = 341 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 47/84 (55%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +LE + +++ R + G P + + +RI+ A++ LE+T +V I ++ GY Sbjct: 239 SLEELSSVANLGSRTFLRRFAKATGLKPTEYVQNVRISKAREHLELTVKTVDQITWDVGY 298 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 S P+ F K F +LT TP SYR++ Sbjct: 299 SDPAAFRKVFHRLTGLTPNSYRQR 322 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 29/258 (11%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR----IL--- 92 H H +EF L+L G+ +NGK L+ G +FI H + G+ IL Sbjct: 41 HWHTDWEFILLLNGKMSYSVNGKSYELQEGQAIFINSEQMHYGYSADGSDCNFICILFPP 100 Query: 93 -NVGISKRFFEQHYLPLL-----PYCFVASQVYRTNNAFLTYVETVISSLNFRETGLE-- 144 + R E + LP+ P+ + ++ N + ++ V N + G E Sbjct: 101 SLISSITRIKETYILPVCEDTSNPFFILHPEITWQRN-LIELLKNVYELCNEEKDGFELH 159 Query: 145 --ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSES------ALENMV 196 L + F + N ++ Q D +E MH+ + + L + Sbjct: 160 VMSLFNTICFSLYNNIKDSISIQETAD-----DKKLEAMHNMTGYIQKNYQKRITLNEIA 214 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 A + + KTP+ + E R+ + + L++++ SVT+IA + G++ S F Sbjct: 215 AAGNVCRSSCCDIFKLILNKTPVSYLTEYRLEKSIELLKISSLSVTEIALQCGFTGSSYF 274 Query: 257 IKTFKKLTSFTPKSYRKK 274 + F K TP YR+K Sbjct: 275 TEIFHKTLGCTPSQYRRK 292 >UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG6_9CLOT Length = 334 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 113/263 (42%), Gaps = 22/263 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD++E V G Q K + D + + + H + + N+ ISK Sbjct: 68 HCHDFFEMIYVYRGNCLQRFPDKEFTMREHDLLLLNPYTIHAPYTIKNEDSVFNILISKT 127 Query: 100 FFEQHYLPLLPYC-----FVASQVYRT-------------NNAFLTYVETVISSLNFRET 141 FE+ L L+ F+ + +Y++ N L VE++I +E Sbjct: 128 LFERSLLSLISDNRIFSEFIINCLYQSSKSNDYLYFPANENEPVLDLVESIIIEYLEKEL 187 Query: 142 GLEELVE---MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-HDKEQFSESALENMVA 197 ++++E ++ F ++R+ H R + + + ++ V + + E +LE++ Sbjct: 188 SYQKVMEASLVLLFAKLSRIYHKRFSSEVLENQKNTQTIVSILAYINENAPNVSLESISE 247 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S +L+R ++ GK QI+ + +I A+ LE + ++ +I +G+ S + F Sbjct: 248 RFNYSTGHLSRMIHQFTGKPYSQIVQKFKIERARSYLENSELTIPEIMELSGFHSANYFY 307 Query: 258 KTFKKLTSFTPKSYRKKLTEFNQ 280 + FKK TP YR N+ Sbjct: 308 RMFKKFYLMTPNEYRSNYAAANK 330 >UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD0_BREBN Length = 298 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 9/122 (7%) Query: 158 LRHYREEQVIDD----VPQWLKSTVE--KMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 + YR + ID+ VP + V + H KE S + N LS + YL + Sbjct: 167 MECYRFMKNIDNPSKQVPDRISEAVCFIQAHYKETISLGDIANAAGLS---RYYLINLFR 223 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 Y TP+Q I ++RI A L TN SV DIA GY++ + F K FKKL +P + Sbjct: 224 EYLNTTPLQYITKLRIEKAMDLLTQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQF 283 Query: 272 RK 273 R+ Sbjct: 284 RE 285 >UniRef50_Q0C558 Transcriptional regulator, AraC family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C558_HYPNA Length = 377 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE-MTNYSVTDIAFEAGY 250 L + A + S+ +++ R+ GK + IN R+ F +++LE T +V DIA EAG+ Sbjct: 288 LTRLSAATGLSKHHVSEVLNRHAGKNFYEFINGYRVEFVRERLEEKTEQTVLDIALEAGF 347 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 SS S F FK+ T TP YRK L N+ Sbjct: 348 SSKSTFNAIFKQFTGQTPTQYRKALAPQNR 377 >UniRef50_C6JCM1 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCM1_9FIRM Length = 303 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/272 (20%), Positives = 113/272 (41%), Gaps = 22/272 (8%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 ++ N + LH H+Y E G F ++ +F IP H + + G Sbjct: 22 WVQNYGNDVDYLHFHNYLEIGFCYEGDGFMAFGEAKMRFSGREFTVIPPNYAHTTNSDLG 81 Query: 88 ATR-----ILNV-GISKRFFEQHYLPLLPYCFV----ASQVYRTNNAFLTYVETVISSLN 137 ++V G K+F P+ + + ++ N F + ++ +N Sbjct: 82 TVSKWEYLFIDVEGFMKKFLNN---PVKAEKMIQRIYSKALFLKENEFPSIAAKILKIMN 138 Query: 138 FRETGLEELVE-----MVTFYV-INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQF---S 188 G E +E + V I RL E +++ L + + ++ D + Sbjct: 139 IMREGEEFYIEESSGVLAALLVEIARLNRASPEDRVEEETGKLTNMITRVLDFVSYHYME 198 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 + +E++ + S+ + R + +P++ IN +RI+ A + L+ T+ V DIA + Sbjct: 199 DIRIEDLAKICHISETHFRRVFTSHMKVSPLEYINSVRIHTACEFLQKTDIPVADIAHKC 258 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 G+++ S F + F+++ TP +RK+ + Q Sbjct: 259 GFTTNSTFNRNFRQIMGVTPVEWRKRPENYEQ 290 >UniRef50_A6DJ96 Arabinose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJ96_9BACT Length = 280 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 3/83 (3%) Query: 194 NMVALSAK---SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 N+ LSA+ S+ R ++ GK+P+ + IRI A L MT +S+ DI F G+ Sbjct: 187 NLSILSARASLSEAAFCRLFKKEMGKSPISYLEHIRITHACHFLSMTTHSIKDITFMLGF 246 Query: 251 SSPSLFIKTFKKLTSFTPKSYRK 273 SS S F FKK TP YR+ Sbjct: 247 SSKSHFCARFKKFNHMTPLEYRR 269 >UniRef50_Q5WL40 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL40_BACSK Length = 323 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 35/262 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR--ILNVGIS 97 H+HDY E V G Q I + V L++G+ V L H + E T I+N I Sbjct: 63 HRHDYIEMNYVYNGSLKQTIGDRAVELQKGELVV--LNQHIEHEIEACGTEDIIINFIIQ 120 Query: 98 KRFFEQHYL--------PLLPYCFVASQVYRTN--NAFLTY---------------VETV 132 FF +Y+ P Y F+ ++ + FL + VE + Sbjct: 121 PSFF--NYIFSFLNVEGPF--YSFLIDSIHGSEPLGQFLYFKCAKEASVQQLLRKMVEEM 176 Query: 133 ISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 + + + ++ V M+ + + +Q + QW++ T + EQ+ ++L Sbjct: 177 MEPDAYSQASIKLYVGMLMIELAKKANTLDGKQKLSLHNQWIRQTFAYI--DEQYKHASL 234 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + + L++ ++ GKT ++ E R++ AK+ L ++ V+ IA E GY + Sbjct: 235 YELAKRLNQPHYLLSKVIKKQTGKTFKALLQERRLDIAKELLVQSDLPVSVIAQEIGYDN 294 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S F + FKK TP YRKK Sbjct: 295 FSYFYQIFKKHFHTTPLVYRKK 316 >UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=Clostridium thermocellum RepID=A3DIQ4_CLOTH Length = 204 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 86 FGATRIL--NVGISKRFFE---QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRE 140 FG I +VGI K++FE + Y+P P + ++ + Y++ I+ R Sbjct: 4 FGKVGIFISSVGIDKKYFENIYRKYIPGNPDFKNDWIQFVISHEVMVYIKKFITEYQERI 63 Query: 141 TG----LEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSES-ALENM 195 G LE L E++ +I + + E+ + +++ +E MH + F + +E + Sbjct: 64 IGYKDILEALSEIICHSLIRGIVGVKTEKNLISDNFEIENIIEYMH--QHFGQKITVEEL 121 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 + S+ + R ++ G +PM + IRI AKK L ++++I+F G++S S Sbjct: 122 AKKTNMSKSHFIRVFKKITGLSPMDYLINIRIEKAKKLLGAGTKNISEISFLCGFNSLSH 181 Query: 256 FIKTFKKLTSFTPKSY 271 F TF K+ +P Y Sbjct: 182 FSSTFSKIVGVSPSKY 197 >UniRef50_C6XVV2 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Pedobacter RepID=C6XVV2_PEDHD Length = 289 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 119/253 (47%), Gaps = 22/253 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRV-LLERGDFVFI-PLGSHHQSFYEFGATRILNVGI 96 LH H+ YE L+L + + I G + L++ + VF+ P SH +E ++ I+ V I Sbjct: 30 LHYHEEYELNLILNAKNAKRIVGNHIHLIDDLELVFVGPNLSHAWFTHECKSSEIIEVTI 89 Query: 97 S--KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETV------ISSLNFRETGLEELVE 148 K F ++ L F+ + R+ ET+ I L ++ G + ++E Sbjct: 90 QFHKDFLDETILRRNQLSFIRNLFERSKKGIAFSTETIKAIKPRILDL-CQKNGFDSVLE 148 Query: 149 MVTFYVINRLRHYREEQVIDDVP------QWLKSTVEKMHD--KEQFSES-ALENMVALS 199 +++ +++ L R + D + +EK+ + +S+ L ++ ++ Sbjct: 149 LLS--ILHDLSISRNMVTLSDAAFINQHSSYNSRRIEKVFEYLNANYSKQITLADVAKIT 206 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 +R ++ GKT + +NEIR+ A + L T ++++IA+ G+++ S F + Sbjct: 207 NMPDVSFSRFIKKRTGKTFIDSLNEIRLGHASRLLIDTTTTISEIAYSCGFNNISNFNRI 266 Query: 260 FKKLTSFTPKSYR 272 FK+ + TPK +R Sbjct: 267 FKRKKNTTPKQFR 279 >UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1K3_CLOBU Length = 285 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 36/256 (14%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGIS 97 LH H+ EF LVL G +IN K + ++RG+ F+ G H+++ + + + + +S Sbjct: 32 LHWHNNLEFVLVLCGEIKGKINNKYIDVKRGEIFFVNSGELHETWANDKNKIKAITILLS 91 Query: 98 KRFFEQHYLPLLPYCF-----------------VASQVYRTNNAF----LTYVETVISSL 136 ++++ + Y F ++Y F ++ V + ++ Sbjct: 92 YELLKKYFPNIDSYYFDFEEKEDSKGKIKDLIVKCGEIYTNKENFYELNMSIVLMELCNI 151 Query: 137 NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 F+E E+ E+ Y I R ++ I + +E+ +D + S S + + Sbjct: 152 LFKECLKEK--EVGNIYNIEEKREVNIKRAI--------TYMEENYDLD-LSLSDISREI 200 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 ++ Y +R ++ G+T +N+IR+ + K+L T S+T+IA G+S+ F Sbjct: 201 GMAPT---YFSRFFKKNTGETFYSYLNKIRLYHSYKELINTEASITEIALNNGFSNVKSF 257 Query: 257 IKTFKKLTSFTPKSYR 272 I+ FKK + TP YR Sbjct: 258 IEIFKKAYNNTPAKYR 273 >UniRef50_C0A382 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A382_9BACT Length = 323 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 46/83 (55%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 LE + + S+EYL R G T +N RI AK L TN+ V +IA G+S Sbjct: 213 LEQIARGTHLSREYLARIFHETTGDTVFAWLNIQRIEAAKSHLCGTNHPVGEIASLVGFS 272 Query: 252 SPSLFIKTFKKLTSFTPKSYRKK 274 S +LF +TFK++T TP YR++ Sbjct: 273 SSTLFCRTFKRITGQTPMKYRRQ 295 >UniRef50_Q93PA7 MS124, putative transcriptional activator n=1 Tax=Microscilla sp. PRE1 RepID=Q93PA7_9SPHI Length = 283 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 41/297 (13%) Query: 2 MQPV---INAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQE 58 M+PV +N E+ T H FIY+K S H H YE TL+L G + Sbjct: 1 MKPVLEKVNLKELETV-----------HAFIYSKPTFESPWHFHPEYELTLILKGSGIRY 49 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYE-----FGATRILNVGISKRFFEQHYLPLLPYCF 113 + + GD V LGS+ ++ G ++ L + ++ LPL + Sbjct: 50 VGDDISDFKEGDLVM--LGSNLPHCWKNDQEHTGESKSLVIQWPEKTIGD--LPL--FNG 103 Query: 114 VASQVYRTNNAFLTYVETVISSLNF-----RETGLEELVEMVTFYVINRLRHYREEQVID 168 + + + ++ E + + N +G++ + ++ +++ L E I Sbjct: 104 IKTLMTKSQRGLRLGAEILNRTSNLMYKVLESSGIQRYLRLIE--LLDHLAEQAEHNFIT 161 Query: 169 DVP---QWLKSTVEKMHDKEQFSESALENMVALSAKSQEY--LTRATQRYYGKTPMQ--- 220 ST ++ + F ++ + + LS + E +A R++ KT + Sbjct: 162 GASYSYDLSSSTTNRLDTVQTFVKNRYKGKIRLSDVADELNMSEQAFSRFFSKTMNKPFF 221 Query: 221 -IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +NE R+N A + + T+ + +IA++ GY S F K FKKL +TP +RK T Sbjct: 222 LFLNEYRVNIASRMILETDLQMAEIAYKCGYDSLPFFYKQFKKLKGYTPLDFRKMYT 278 >UniRef50_D1PCF3 Putative two-component system sensor histidine kinase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCF3_9BACT Length = 959 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%) Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + +EK F+ S L++++ + K L R + G+TP++ I E+R+N A + Sbjct: 860 INEAIEKHMIDSDFNVSMLQDVIGIGGKQ---LYRKMKAITGRTPVEYIREMRMNRAAEL 916 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L +SV+++ + G+S+ S F K F K TP Y K Sbjct: 917 LSQGKFSVSEVMYTVGFSNSSYFSKCFSKEYGMTPTEYMK 956 >UniRef50_A5V4G1 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4G1_SPHWW Length = 306 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 54/103 (52%) Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 +P W V + + + ++E + + + S ++ +A G+TP Q ++ +RI Sbjct: 199 LPAWRMKKVRSLVAERPGLDLSIEELASSTGLSADHFVKAFSTTMGQTPHQWLSSLRIEE 258 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 AKK L T+ +T+IA + G+SS + F FK+L P ++R Sbjct: 259 AKKLLRQTDQPLTEIALDLGFSSSAHFSSRFKQLVGMPPSAWR 301 >UniRef50_C6CFY9 Transcriptional regulator, AraC family n=4 Tax=Dickeya RepID=C6CFY9_DICZE Length = 187 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT-NYSVTDIAFEAG 249 LE++ A+S KS+ + R + Y TPM+ I +R+ AK+ + ++ N+S+TDI + G Sbjct: 60 TLEDLEAVSGKSKFDICRLFNQVYNITPMRWIWRVRLTLAKEIIHISPNWSLTDICYACG 119 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +SS F + F K + P YRK ++ Sbjct: 120 FSSLPHFSRCFTKTYNIPPLKYRKSVS 146 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 51/269 (18%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH------------------- 80 H HD +E + G + +G V L GD +FI G H Sbjct: 44 HWHDEFELGYISGGSVVYQTSGLTVTLHEGDGIFINSGVLHYLHPLEPCREARLQTQFFD 103 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN---NAFLTYVETVISSLN 137 +SF +L++ +Q L +P +YR++ FL ++ + + Sbjct: 104 KSFLAGSLGSLLDIKYVAPVLDQRQLEAVP-------LYRSDPESKGFLECLQKGVELCS 156 Query: 138 FRETGLE--------ELVEMVTFYVINR------LRHYREEQVIDDVPQWLKSTVEKMHD 183 +E E EL E + + + LR E+ I + +++++ H Sbjct: 157 RKEEFFELRLRNLFSELWESIYRWAAQKESSTPSLRRSIEDDRIKQMMRYVQA-----HF 211 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 E+ S S++ + +S + R Q G TP++ + +R+ A+ L TN S+ D Sbjct: 212 SEKISVSSIAASIPISERE---CYRLFQNSMGITPIEYLISVRLQNAQSLLMNTNKSILD 268 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 IA E G+ S S F K F+ TP YR Sbjct: 269 IALETGFGSSSYFGKIFRSHHRLTPAQYR 297 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 45/72 (62%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S++YLT ++ G TP++ +N R+ A+ L ++ S+T+IA E G+SS S F + F+ Sbjct: 1124 SEDYLTHCFRQELGTTPVEYLNRYRVLQARHLLAESDKSITNIALEVGFSSSSYFSRVFR 1183 Query: 262 KLTSFTPKSYRK 273 K +P+ YR+ Sbjct: 1184 KEVGQSPEEYRR 1195 >UniRef50_UPI000178A007 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A007 Length = 278 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 37/60 (61%) Query: 214 YGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 Y TPMQ + E+RI A+K L T + I FE GY S S F ++FK ++ +PK+YR+ Sbjct: 211 YNMTPMQYLTEVRIRVAQKLLVETGKDIISICFEVGYDSVSTFYRSFKAVSKLSPKTYRE 270 >UniRef50_UPI00017450D3 transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017450D3 Length = 285 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%) Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 Q + VP L+ + +M ++ ++++ L ++ L+ S + R +R G +P+ + Sbjct: 168 QDTEPVPSTLERPLIRM--RQHYADALRLSDLAHLAGMSVSHFIRTFKRTMGTSPIDWLR 225 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 R+N AK +L T+ + +IA + GY P F K FKKLT P YR Sbjct: 226 RERMNQAKHRLIDTDEPIKEIARQCGYRDPYFFSKDFKKLTGLPPTDYR 274 >UniRef50_A1KC76 Putative AraC family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1KC76_AZOSB Length = 345 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 20/148 (13%) Query: 139 RETGLEELVEMVTFYVIN----------RLRHYR--EEQVIDDVPQWLKSTVEKMHDKEQ 186 R G++E + + +I+ RL R E+ +I D W+ ++ Sbjct: 192 RLAGVDEAMHVARLNLIDWHHSGQQPFARLARSRQAEDALIADCQAWIADNYQR------ 245 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + + MVA S + R Q G +PM+ ++ +R+ AK+ LE + +V +A Sbjct: 246 --PTPVAAMVARSGLPERSFKRRFQLATGMSPMEYVHTLRLEEAKQMLEASTLAVEAVAL 303 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 E GY S F + F++ TP +YR++ Sbjct: 304 ELGYEDASFFNRLFRREVGLTPAAYRRR 331 >UniRef50_B8DF67 Methylphosphotriester-DNA alkyltransferase n=19 Tax=Listeria RepID=B8DF67_LISMH Length = 186 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%) Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEY-LTRATQRYYGKTPMQIINEIRINFA 230 +W+ T +M+ KE F++ ++A Y L R +R TP+ + IRIN+A Sbjct: 81 EWV--TNIEMYIKENFAKPLTLQIIADDCHGSPYHLHRTFKRITMITPITYLENIRINYA 138 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 KKQL +N S+ I +G+ +PS F TFK+ T +P +RK + Sbjct: 139 KKQLTSSNQSIEIIGKMSGFPNPSHFSTTFKRHTGLSPNQFRKTI 183 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 70/140 (50%) Query: 135 SLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALEN 194 SL+ ET ++L+E++ +++ + + + +++ D + +L+ Sbjct: 134 SLDGCETVCQDLLEVLLIWLVRCTTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDL 193 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + L+ ++ YL QR YG +P+ +N RI +K L T YS+ I+ G+SSPS Sbjct: 194 LAELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPS 253 Query: 255 LFIKTFKKLTSFTPKSYRKK 274 F + F+K TP YR++ Sbjct: 254 YFSQCFRKAEGMTPNEYRRQ 273 >UniRef50_C2GWE4 AraC/XylS family transcriptional regulator n=4 Tax=Bifidobacterium longum RepID=C2GWE4_BIFLO Length = 321 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 40/72 (55%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S YLT +R +G + I E RI+ A++ L T SV DIA E GY+ P F++ FK Sbjct: 240 SPSYLTAMYRRVFGVGVAEQIIEYRIDRARELLSSTASSVADIAREVGYADPKYFMRVFK 299 Query: 262 KLTSFTPKSYRK 273 + T TP YR Sbjct: 300 RRTGLTPGQYRD 311 >UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8S1Q1_9CLOT Length = 322 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 28/259 (10%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-QSFYEFGATRI-LNVGIS 97 H H+Y E + G ++G+ + L+ G+ +F L H Q G I +N I Sbjct: 65 HTHNYVEVIYMCRGETTHVVDGRELKLKEGELLF--LNQHAVQEIQPAGQDDIAVNFIIL 122 Query: 98 KRFFEQHYLPL----------LPYCFVASQVYRTNNAFL--------TYVETVISSLNFR 139 FF+ + + + C Y F VE ++ SL Sbjct: 123 PEFFDTAFRMMGEEENLLRDFIVGCLCDDTRYGRYLHFQIADVLPVQNLVENLVWSLMHE 182 Query: 140 ETGLEELVEMVTFYVINRLRHYREEQVID-----DVPQWLKSTVEKMHDKEQFSESALEN 194 G++ + + ++ L HY ++ Q L V + D E + E +L Sbjct: 183 REGMQAMNQTTMGLLLRHLMHYTGRIRVNRDSEQSFEQQLTLQVLRYID-EHYREGSLTE 241 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + AL +L+RA R G+ +++ R+N A L T V D++F GY + S Sbjct: 242 LAALMGYDVYWLSRAINRLLGRNYKELLQIKRLNQAAFLLHSTRMPVADVSFAVGYDNTS 301 Query: 255 LFIKTFKKLTSFTPKSYRK 273 F + F+ +PK YRK Sbjct: 302 YFYRIFRTYYGMSPKEYRK 320 >UniRef50_B8FFF2 Transcriptional regulator, AraC family n=2 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FFF2_DESAA Length = 333 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%) Query: 184 KEQF-SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +E+F S ++E + S + R ++ G +P+ + +RI AK QLE T S+ Sbjct: 231 EEKFPSRISVEALACDMGVSPRHFVRRFKQATGDSPLIYLQRVRIEAAKHQLEKTAQSIE 290 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 +I + GY P+ F K FKK T +P+ YR + T Sbjct: 291 EITQQVGYEDPNSFRKLFKKTTGLSPREYRNRFTRL 326 >UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRZ8_ALKMQ Length = 529 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 27/154 (17%) Query: 123 NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMH 182 N++L Y+ ++I S+ E EL ++T + +HY E ++DV Q + Sbjct: 402 NSYLNYIRSIIFSI--EEIRKNELNGLITKALAFIQKHYNENICLNDVAQEI-------- 451 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 NM S Y ++ + GK + + E++I +K+ L+ + S+ Sbjct: 452 -----------NM------SYHYFSKFFKESTGKNFVDYLTELKIERSKELLKNQSISIK 494 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +I +E GYS P+ F K FKK+T TP +YR ++ Sbjct: 495 EICYEIGYSDPNYFSKAFKKITGVTPTAYRACIS 528 >UniRef50_A1S8K4 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8K4_SHEAM Length = 336 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 8/112 (7%) Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 E++ I QWLK H +Q S + + +++ A++ R + G TP++ + Sbjct: 225 EDEAIRKAEQWLKH-----HFDQQISVDSAADAISMGARN---FKRRFKAATGVTPIEYL 276 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +R++ AK+QLE ++ + T++ + GY S F + FK+ T T + YR++ Sbjct: 277 QRLRVDAAKRQLEHSSRASTEVIWSVGYEDASSFRRLFKRQTGVTMEQYRRR 328 >UniRef50_C3JXK6 AraC-family transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=C3JXK6_PSEFS Length = 297 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Query: 184 KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +E +E+ LE++ + S YL RA ++YYG TP + RI FA+ QL + Sbjct: 188 REHCTEALKLEDICLAAELSPSYLIRAFKQYYGLTPHAFLVNRRIQFARAQLRQGEL-IA 246 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 D+A AG++ + F +TFK+ + TP YR+ L Sbjct: 247 DVALAAGFADQAHFQRTFKQHFAATPGQYRELL 279 >UniRef50_C7IE87 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IE87_9CLOT Length = 329 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 43/82 (52%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +L NM +L S Y ++ +R G IN IRI A++ LE T+ +T+IA + G+ Sbjct: 244 SLNNMASLCNISTSYFSKLFRRTIGDNFSNHINRIRIKKARELLETTDIPITNIALDLGF 303 Query: 251 SSPSLFIKTFKKLTSFTPKSYR 272 FIK FKK TP +R Sbjct: 304 EDSGYFIKVFKKFEGVTPSKFR 325 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 17/259 (6%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF 86 V+ K +I GLH+HD +E + G IN + RGD V+I L H YE Sbjct: 18 VWPVQKAGAI-GLHRHDCFELVFITRGTGLCRINDLSYPVLRGD-VYI-LNPHDTHCYEM 74 Query: 87 GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAF--LTYVET---------VISS 135 ++ + +R QH L P + RT+ L ET +I Sbjct: 75 ASSCTFYNILFRRELLQHEPALTP--LLDDWESRTDRKLYQLENDETDAEEFRFQEIIVE 132 Query: 136 LNFRETGLEELVE-MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALEN 194 L R G E V + +++ LR E+ I + S V + + S +L Sbjct: 133 LKKRLPGYEAAVRALFAVFLVRLLRRGNCERHIPPGHRPSASKVFEYINAHLGSTISLRE 192 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + ++ S A +++ G + I +RI A++ LE ++ +IA G+ Sbjct: 193 LAGVAGMSTPAFAGAFRQWTGNSVPGHIGALRIRQARRLLEERKLTIGEIALRLGFYDTC 252 Query: 255 LFIKTFKKLTSFTPKSYRK 273 F + F+K T +P+ YR+ Sbjct: 253 HFSRVFRKKTGLSPREYRQ 271 >UniRef50_C6D1M1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D1M1_PAESJ Length = 549 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 47/82 (57%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E + +L+ + TR + G+ P+Q +NE+RIN AKK L T+ + DIA AG++ Sbjct: 202 VEELASLAGIDRWKYTRLFKEATGQVPLQYLNEVRINEAKKWLVSTDDKLLDIALNAGFN 261 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 + F + FK+ +P YR+ Sbjct: 262 NEYYFNRRFKQTVGISPGQYRR 283 >UniRef50_A3W1D7 Transcriptional regulator, AraC family protein n=3 Tax=Rhodobacteraceae RepID=A3W1D7_9RHOB Length = 342 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 49/83 (59%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +++++ + S+ + R +Y KTP + ++R++ + L T+ SVT+IA +G+ Sbjct: 258 SMDDLADAAGCSRRQMERLFVKYLRKTPYRFFRDLRLDHGRSLLRETDLSVTEIAMASGF 317 Query: 251 SSPSLFIKTFKKLTSFTPKSYRK 273 +SP +FIKTF+ +P YR+ Sbjct: 318 ASPMVFIKTFRSRFGHSPGQYRR 340 >UniRef50_B5JMW9 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMW9_9BACT Length = 224 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 46/81 (56%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E++ + S +L + YG TP Q+I E R++ A++QL T YS+ +IA G++ Sbjct: 138 VESLAKEAGWSVAHLHDQFKTAYGSTPRQMILERRLSSAREQLVGTGYSIKEIAANTGFT 197 Query: 252 SPSLFIKTFKKLTSFTPKSYR 272 S F F+K TPK+YR Sbjct: 198 HSSAFCSAFRKAFGVTPKAYR 218 >UniRef50_UPI0000DAF41A hypothetical protein PaerPA_01003251 n=1 Tax=Pseudomonas aeruginosa PACS2 RepID=UPI0000DAF41A Length = 306 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 9/117 (7%) Query: 159 RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTP 218 R++R+E ++ L+ +E H + LE M A + + L R G +P Sbjct: 194 RNHRDESILA-----LQDWIEANHAEPL----GLERMAAQAGLALRTLKRRFGAATGLSP 244 Query: 219 MQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++ + ++R++ AKK L T S+ +IA+E GY + S F++ F+K TP +R ++ Sbjct: 245 IRYLQQVRVDRAKKLLLATPLSIREIAYEVGYENVSFFVRLFRKEAGDTPSHWRGRV 301 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 48/76 (63%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 SQ YL+R ++ G T ++ IN IRI A++ L TN+ V DI+ G+ S S F + FK Sbjct: 207 SQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVGFGSISHFGRVFK 266 Query: 262 KLTSFTPKSYRKKLTE 277 ++T F+P +YR+ TE Sbjct: 267 EVTRFSPLNYRRLNTE 282 >UniRef50_Q2SHV1 AraC-type DNA-binding domain-containing protein n=2 Tax=Proteobacteria RepID=Q2SHV1_HAHCH Length = 370 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 44/71 (61%) Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 ++ A R YG+ Q++NE RI AK+ L+ T+ VT + FEAG+ + S F + F+++ Sbjct: 297 ISGAINRVYGRNVSQVVNEYRIEEAKRLLQETDLPVTSLLFEAGFQTKSNFNREFQRVAG 356 Query: 266 FTPKSYRKKLT 276 TP YR+ ++ Sbjct: 357 MTPSDYRRSVS 367 >UniRef50_UPI0001787E19 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787E19 Length = 533 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 +K TVE +H + + E++ + S +Y TR +R GK+PM ++ +R+N AK++ Sbjct: 161 VKQTVEYIH-RHYHRNISREHLAERAGLSSDYFTRIFKRQLGKSPMSYLSAVRLNHAKQE 219 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 L +T S IA GY+ F + F+ +T +P Y K++ + ++ Sbjct: 220 LLLTKDSFRTIAQRIGYADEFYFSRKFRMMTGMSPSMYVKQMKKADK 266 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 10/139 (7%) Query: 137 NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 + T E+L MV + I RH + I ++ D+ LE + Sbjct: 383 ELKRTATEQLQHMVHY--IQAWRHQQANGKIGKAKDYI--------DEHYHHPLTLEEVA 432 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 S Y ++ + +G T + + E+RI AKK++ N S+ +I F GY+ P+ F Sbjct: 433 EYVGISPYYFSKLFKDRFGMTFIDYVTEVRIARAKKEMADPNKSLKEICFLVGYNDPNYF 492 Query: 257 IKTFKKLTSFTPKSYRKKL 275 + FKK T +P YRKKL Sbjct: 493 SRVFKKHTGMSPTEYRKKL 511 >UniRef50_B5KB88 Transcriptional regulator, AraC family n=1 Tax=Octadecabacter antarcticus 238 RepID=B5KB88_9RHOB Length = 438 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E MVA S + +R + G P++ + +RI AK+ LE SV DI GY Sbjct: 342 VEQMVARSGLNPRTFSRRFRSVTGFAPIEYVQALRIEEAKQMLETDAQSVDDIGSSVGYE 401 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 P+ F + FK+ +P +YRKK Q Sbjct: 402 DPASFRRVFKRGVGLSPAAYRKKFQRIAQ 430 >UniRef50_C6D0B3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0B3_PAESJ Length = 300 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 53/280 (18%) Query: 39 LHQ----HDY-----YEFTL--VLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 LHQ H+Y Y+F L VL GR + G L G+ +FI G H + G Sbjct: 28 LHQTIRNHEYPLRRIYDFELLYVLDGRITAHLGGTDYSLSTGEMLFISAGVPHNLNIDSG 87 Query: 88 ATRILNVGISKRFFEQHYL---------------------PLLPYC--FVASQVYRTNNA 124 + L +GI FF++ + LL C F + V+ + Sbjct: 88 --QALFLGIHFDFFDEFDIVIDQDIIVKDDTVVVEDFCSEALLSGCRPFSDNPVWTPSAE 145 Query: 125 FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE---------QVIDDVPQWLK 175 + +ETVI + G E + + + ++ L+ R E + + V +W++ Sbjct: 146 LVKEMETVIKEFTLTKPGFEAVCKGLMISILINLQRSRTEAGPHLTTRRERMTPVVEWIE 205 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 H E S L ++ + ++YL + + YG + + + IR AK+ L Sbjct: 206 Q-----HYMEDCSNETLAKLLNIH---EDYLGKQFKSVYGMSLNKYVQSIRHREAKRLLR 257 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++ +V ++ E GY F + F K +P+ YRK + Sbjct: 258 ESDATVEQVSREVGYEDMHYFSRIFNKWEGLSPREYRKTV 297 >UniRef50_UPI0001C373B4 transcriptional regulator, AraC family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C373B4 Length = 248 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%) Query: 143 LEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDK--EQFSESALENMVALSA 200 L+ EM T Y R+ R+ VI ++ ++ ++D E + L V L + Sbjct: 114 LDIFDEMRTDYA-RRMHELRKSNVI---SLHIRKCIDYIYDHLHEDLTVKTLAEAVGLES 169 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 YL++ + G T IN+ +I+ A+ L+ +++S ++I+F G+SS S FI F Sbjct: 170 T---YLSKLFSKETGTTIRHFINKAKIDTAQNLLKYSDHSCSEISFALGFSSQSAFISVF 226 Query: 261 KKLTSFTPKSYRKK 274 KK T TP+ YR++ Sbjct: 227 KKGTGLTPRQYREQ 240 >UniRef50_C1P8W3 Transcriptional regulator, AraC family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P8W3_BACCO Length = 317 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 9/118 (7%) Query: 159 RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTP 218 RH++ +V + +W+++ + + E ++E++ +YLTR +R T Sbjct: 180 RHFKNSRV-SKIKEWIRANLSE--------ELSVEDVARAFQIHPDYLTRLFKRNTHCTT 230 Query: 219 MQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +Q INE++I AK L TN +V+ IA A + F++ FKK+T TP YR T Sbjct: 231 LQFINELKIETAKMLLLRTNLTVSQIASHAYFIDEKNFMRRFKKMTGLTPTEYRNAYT 288 >UniRef50_C0EGL1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGL1_9CLOT Length = 316 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 18/256 (7%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGI 96 +G H HD++E V G + I+ + + V + LG+ H + E + N+ + Sbjct: 61 TGFHYHDFFEMIYVYRGSFMHTIHDETLRQTEDQVVLLNLGAVHSVWVESKDDIVFNIMM 120 Query: 97 SKRFFEQHYLPLLP-----YCFVASQVYRTN--NAFLTY---------VETVISSLNFRE 140 K E +L + Y F V+ N ++F+ + +I R+ Sbjct: 121 KKSVVENIFLQITSKDHPIYNFFLDSVFGINKLSSFIVLEMNQGISLILNKIIEEYYERK 180 Query: 141 TGLEELVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 ++ + + L R YR + + P KS+ + K+ ++ LE++ + Sbjct: 181 VYNRSIILAYLLVLFSELARKYRSDNNLV-APDHTKSSDILHYIKQNYASLTLESLADMF 239 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S+ ++ R + KT +I + +I ++ TN ++ I AG+S PS F KT Sbjct: 240 GYSRHHMGRLILSWTNKTFTDLITDYKIQSVCSLVQNTNLPISKIVEIAGFSDPSHFYKT 299 Query: 260 FKKLTSFTPKSYRKKL 275 F+K +YR+ L Sbjct: 300 FQKKMGIHFSTYRQHL 315 >UniRef50_C9AAA4 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AAA4_ENTCA Length = 277 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 29/249 (11%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H+YY L+ G ++E GD + IP + H+ + +++ I Sbjct: 30 HWHEYYVIGLMEAGTRQFTCQNTCYIVEAGDLILIPPKAAHRC-QQLTEEKLVYRNI--- 85 Query: 100 FFEQHYLPLLPYCFVASQVYRTNNAFLT--YVETVISSLNFRET------------GLE- 144 H P +A QV + N LT + E VI + RE G E Sbjct: 86 ----HLTPE----NMAVQVQKIFNTQLTPHFPEPVIRQVKEREEFHAVHQLLLSDRGDEF 137 Query: 145 ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSES-ALENMVALSAKSQ 203 E E T + + L Y + P K+ K + + ++E +L + + +Q Sbjct: 138 EKQERFTCLLHDLLVQYADFTHEQTDPVSNKAATAKAYIDQHYAEKLSLSELSDVLGMNQ 197 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 L R + YG +P Q ++ +RI+ AKK+LE ++ ++AF G+S S F + FK L Sbjct: 198 YVLIRQFTKAYGLSPFQYLSTVRISAAKKRLEAQE-AIAEVAFLTGFSDQSHFTRIFKSL 256 Query: 264 TSFTPKSYR 272 TPK+Y+ Sbjct: 257 IGVTPKAYQ 265 >UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0C8_RUMGN Length = 301 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 22/257 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG----SHHQSFYEFGATRILNVG 95 H H+ YE + G N + +++G + + +H G TRI+ + Sbjct: 30 HFHNEYEIYFLTEGERLFFFNNRAYQVKKGSLILVDTNLIHMTHAPEDDTTGYTRII-LY 88 Query: 96 ISKRFFEQH-----YLPLLPYCFVASQVY----RTNNAFLTYVETVISSLNFRETGLEEL 146 I K +Q +L L+P+ VY + FL E + + + R + L Sbjct: 89 IDKFKMQQFDEKFPHLNLVPFFREHYGVYNLTQKQQEKFLHMYEVLKTEFSNRSRSYKAL 148 Query: 147 VEM-VTFYVINRLRHYREEQVIDDVPQWLKS----TVEKMHD--KEQFSES-ALENMVAL 198 +EM + Y I+ +R E I D KS T+ + D + ++ES +L+ + + Sbjct: 149 IEMEIIHYFIDFIRDNPELTPIKDETAIHKSSKYQTIYNIADYISDHYAESISLDGLAGV 208 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S+ YL+R+ + G + +N +R AK+ LE T SV++IA GY S + F K Sbjct: 209 FYLSKFYLSRSFKEVTGYGVNEYVNILRTKRAKQLLEETTLSVSEIAGTVGYESITYFEK 268 Query: 259 TFKKLTSFTPKSYRKKL 275 FK S +P YRK L Sbjct: 269 VFKTYMSISPLKYRKTL 285 >UniRef50_C4Z413 AraC family transcriptional regulator, arabinose operon regulatory protein n=18 Tax=Clostridiales RepID=C4Z413_EUBE2 Length = 276 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E S + R +++ G TPMQ I +R+N A+ LE TNYS+ +I+ GY Sbjct: 189 IEEYATSKGMSVSWFIRNFKKFTGSTPMQFIVALRVNNAQVLLEATNYSINEISKIVGYD 248 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 + F + F KL +P+ YRK Sbjct: 249 NQLYFSRLFHKLKGDSPRDYRK 270 >UniRef50_D1QW91 Arabinose operon regulatory protein n=1 Tax=Prevotella oris F0302 RepID=D1QW91_9BACT Length = 92 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 40/65 (61%) Query: 211 QRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKS 270 +++ G P+Q I EIR+ +K+ L TN S+ DIA++ GY S F TF+K TP + Sbjct: 26 RKFTGYAPLQYIQEIRLTKSKQLLANTNLSLADIAYQVGYESVDYFSTTFRKKNGITPTA 85 Query: 271 YRKKL 275 YRK + Sbjct: 86 YRKSV 90 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 45/81 (55%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L ++ L SQ + +R ++ G TP Q + + RI AK+ L+ T S+ DIA G+ Sbjct: 209 LADLAQLVGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAKQLLKQTQQSLVDIALVCGFD 268 Query: 252 SPSLFIKTFKKLTSFTPKSYR 272 S S F + F+K T TP +YR Sbjct: 269 SHSHFSRQFRKATGMTPSAYR 289 >UniRef50_C1I9D8 Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9D8_9CLOT Length = 179 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 61/101 (60%) Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + +++++++DK F E ++ ++ ++ +L R + + TP I++IRIN AK+ Sbjct: 79 IANSMKEIYDKYYFDEELIKIKISNLHIAKSHLIRVFNKTFSLTPKAYISKIRINKAKEL 138 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L+ ++ S+T+I+++ GY S F FKK+ +P SYR K Sbjct: 139 LKASDKSITEISYDCGYKSLLTFYDNFKKVEGMSPMSYRIK 179 >UniRef50_B1HSI7 Transcriptional regulator, AraC family n=2 Tax=Bacillaceae RepID=B1HSI7_LYSSC Length = 308 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 49/91 (53%) Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + + + + L+ + A+ S YL+ ++ G + + I + RI+ AKK L TNY + Sbjct: 212 ENQLYGDITLDQLSAICHLSPNYLSSLFKKEVGISFTEYIQQQRIDEAKKLLTFTNYPIL 271 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 DI ++ S FIK FKK T TPK YR+ Sbjct: 272 DIGSLLNFTDQSYFIKVFKKFTGITPKQYRR 302 >UniRef50_B8HZN5 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=B8HZN5_CYAP4 Length = 360 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 1/91 (1%) Query: 184 KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 ++ F ES A++ +V+ S + L R + G T ++ + +RI AK Q E+++ SV Sbjct: 242 RQCFRESNAIQQIVSQSKIPERTLKRRFKAATGSTLIEYLQNLRIEEAKHQFEVSDKSVE 301 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 I +E GY S F + FK+LT TP YR+ Sbjct: 302 SICYEVGYEEVSFFRRLFKRLTGITPSQYRR 332 >UniRef50_A6M0N1 Response regulator receiver protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M0N1_CLOB8 Length = 336 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 11/120 (9%) Query: 156 NRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 N ++ Y +++DV ++++ +E+ E L ++ + SQ YL+R +R + Sbjct: 228 NSIKKY---SILNDVFSYIENNIEE--------EIGLNEIINNCSVSQGYLSRIFKRQFN 276 Query: 216 KTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + M+ ++ +IN AK T+ S+TD+AF+ GY+ S F K FKK + T Y+K L Sbjct: 277 ISVMEYLHMRKINMAKSYFCFTDLSITDVAFKLGYNESSYFSKVFKKYENTTVYKYKKML 336 >UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivorax RepID=Q0VT12_ALCBS Length = 305 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 1/85 (1%) Query: 191 ALENMV-ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +L++++ A S S+ + R +R G+TPMQ I+++ A L++++ SV IA + G Sbjct: 217 SLDDLITATSDLSRYHFIREYKRQTGQTPMQAFQRIKVSHACYLLDISDDSVATIALQLG 276 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKK 274 + P F + FKK+ +P+ YRK+ Sbjct: 277 HDDPYYFSRLFKKMMGISPQKYRKE 301 >UniRef50_D2LWT4 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LWT4_BACS4 Length = 294 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 42/70 (60%) Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 +Y+TR+ ++ G TP+Q +N R++ AK ++ N+ + +A E G+S S F + FKK Sbjct: 214 DYITRSMKKVIGMTPIQFLNHYRLSMAKSKIIRGNHDLDTVARECGFSDVSYFSRIFKKK 273 Query: 264 TSFTPKSYRK 273 TP YR+ Sbjct: 274 EGMTPGQYRR 283 >UniRef50_Q2SQA4 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQA4_HAHCH Length = 333 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%) Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 + +LE M A++ + L R ++ G TP+Q + ++RI A++ LE + +V I ++ Sbjct: 240 DVSLEEMAAVARVGERTLQRRFRKALGMTPLQYVQQLRIQRARELLETSMATVERIIWDV 299 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 GY PS F K FK T T YR + Sbjct: 300 GYEDPSSFRKLFKLATGLTMTEYRAR 325 >UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=Bacillus RepID=C3LC07_BACAC Length = 296 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%) Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +++ + L N+ ++ S+ + R Q G T M+ + + R+ A QL T+ + Sbjct: 16 EEDVMEKQTLRNLARIAGFSESHFHRVFQALVGDTVMEYVRKRRLARAAYQLSHTDEKII 75 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 DIAFE G+ S F + FKKL TP YRK+ E Sbjct: 76 DIAFEHGFQSHETFTRAFKKLFQMTPSEYRKQEIE 110 >UniRef50_C5RQN6 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQN6_CLOCL Length = 696 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 17/251 (6%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H+ E VL GR+F +I + L + I H+ + E IL I Sbjct: 26 LHWHNCLEILFVLKGRFFVQIESEIYELCEREIEIINADEPHRVYSEDEDNLILVFKIHL 85 Query: 99 RFFEQHYLPLLPYCFVASQV---------YRTNNAFLTYV--ETVISSLNFRETGLEELV 147 FFE+++ + F + Y+ FL + E V ++ E E+LV Sbjct: 86 DFFEKYFNDVKNIYFYTNSSDEGIQEEDKYQELRKFLAILACEAVQQEEDYDEEVEEQLV 145 Query: 148 EMVTFYVINRLRH--YREEQVIDDVPQWLK--STVEKMHDKEQFSESALENMVALSAKSQ 203 +++ F+++N + Y EE I++ Q+ + + +HD ++ +L+++ + S Sbjct: 146 KLL-FHLLNNFHYLTYDEEVAIENQVQFQRYHRITKYIHDN-YMNKISLQDIASREFLSS 203 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 YL+ + G + +N R+N + K L ++ +++DI+ E G+S + K FK+L Sbjct: 204 YYLSHEIKNMAGTNFIDFLNTTRVNESIKFLLDSDKTISDISEEVGFSHTRYYNKYFKQL 263 Query: 264 TSFTPKSYRKK 274 + TP YRKK Sbjct: 264 YNITPLQYRKK 274 >UniRef50_Q11KV0 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11KV0_MESSB Length = 311 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 12/210 (5%) Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY 128 G F+P S + E + R ++ IS FE + F ++ FL+ Sbjct: 80 GSVSFLPANSQRRLRLEAVSWRWASIAISPDHFEDMTGGVHIDAFSTR-----DDRFLSA 134 Query: 129 VETVISSLNFRET--GLEELVEMVTFYVIN-RLRHYREEQVIDD----VPQWLKSTVEKM 181 + ++ R+ L L M+T + + R+R+ E + + + +P W + Sbjct: 135 LLGQLAWYQVRDGHLNLPYLDAMLTALIHHLRVRYQTESRAVTERLRRLPSWAIRRITDY 194 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + E + + L+ S+ + RA + GKTP+Q INE+RI A + L + Sbjct: 195 IVAQLPGEVRVSMLAKLTGLSEGHFHRAFRATTGKTPLQFINELRIQSAIQILNQHPINT 254 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 ++A G+SSP+ F + F+K +P +Y Sbjct: 255 AELAVAVGFSSPTYFSRVFRKAVGCSPSNY 284 >UniRef50_A6DG33 Transcriptional regulator, AraC family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DG33_9BACT Length = 250 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 48/85 (56%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L+++ S R ++ +G TP I ++R A + L + S+T++A++ G+S Sbjct: 165 LDDLAEAVCMSTSTFLRNFKKQFGMTPGNYIKQVRYKAACRLLSESALSITEVAYDTGFS 224 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLT 276 S F + FKK++ TPKSYR+K + Sbjct: 225 DQSHFTREFKKISGVTPKSYRQKFS 249 >UniRef50_D0M881 AraC-type DNA-binding domain-containing protein n=9 Tax=Vibrio RepID=D0M881_VIBSE Length = 285 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 47/83 (56%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 ++E + AL S+ +L R TQ+ +G++PM + +R+ +A + L T + + I GY Sbjct: 193 SVEQVAALYPCSEPHLHRLTQKQFGRSPMAHLTRMRMEYAARLLRSTEWPIQHIGEIVGY 252 Query: 251 SSPSLFIKTFKKLTSFTPKSYRK 273 + + F FK +S TP+ +RK Sbjct: 253 PTSANFSTRFKAWSSMTPREFRK 275 >UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY13_9FIRM Length = 271 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 9/142 (6%) Query: 138 FRETGL--EELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD--KEQFSES-AL 192 FR + L ++L+E V +I+ LRH E + D Q + ++ + + ++ +S+ L Sbjct: 126 FRGSDLIMKKLIECV---MIHLLRH-NELSIKDASLQAKHNEIDVLQNYIRKNYSKKITL 181 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 E + L ++ YL R ++ G +P+ + +R+ A+K L +N +V+DI+ G+ S Sbjct: 182 EELSDLVDINKYYLIRLFKQQTGLSPIDYLIHVRLEEAEKLLAKSNITVSDISDRVGFHS 241 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 PS F KTFK+ TP YRK+ Sbjct: 242 PSHFSKTFKENNHCTPSQYRKR 263 >UniRef50_Q893H5 Transcriptional regulatory protein n=1 Tax=Clostridium tetani RepID=Q893H5_CLOTE Length = 259 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN--YSVTDIAFEAGYSSPSLFIKT 259 SQ YLTR ++ G + +N++RIN AKK L N Y++ DI+ GYSS F + Sbjct: 175 SQSYLTRVIKQKTGVSFTDYLNKLRINMAKKLLTDNNNDYTINDISNMVGYSSQHYFSRA 234 Query: 260 FKKLTSFTPKSYRKKL 275 FK +PK+YR K+ Sbjct: 235 FKNYMEISPKNYRNKV 250 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 43/71 (60%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S YL++ ++ G + I +IRI+ AK+ L +N S+ +IAF GY+ P+ F K FK Sbjct: 171 SSSYLSKLFKKEMGINFNRYITKIRIDKAKEILINSNISINEIAFSVGYNEPNYFCKVFK 230 Query: 262 KLTSFTPKSYR 272 K+ + TP YR Sbjct: 231 KIVNMTPSEYR 241 >UniRef50_Q0ARR3 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARR3_MARMM Length = 349 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%) Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 E S AL N LS + + R+ + Y ++P Q + IR++ AK L ++ + ++ Sbjct: 255 EDLSVEALANRACLS---ERHFRRSFKAIYNESPAQAVERIRVDIAKNWLMASSAPIAEV 311 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A G+ S F + F++LTS P YR++ + Sbjct: 312 ALLVGFQSADAFRRVFERLTSINPSEYRRRFS 343 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +LE+M +++Y + + KTPM+ +N RI A ++++ + S+TD+A++ G+ Sbjct: 199 SLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFDSSITDVAYDCGF 258 Query: 251 SSPSLFIKTFKKLTS-FTPKSYRK 273 + S F K FKK S TP+ Y K Sbjct: 259 NDTSYFTKVFKKYNSGMTPREYSK 282 >UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTP1_9SYNE Length = 294 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 53/81 (65%) Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 ++ +L+ S+ Y +R+ ++ G +P Q + + R+ AK+ L+ + S++DIA + G+++ Sbjct: 214 DLASLTNMSKSYFSRSFKQSVGISPYQYVIQQRVERAKQLLKQQSISISDIALDCGFANQ 273 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 + K F+++T TPK+Y+K+ Sbjct: 274 THLTKAFRQMTGTTPKAYQKE 294 >UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T9_EUBR3 Length = 276 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 61/105 (58%), Gaps = 6/105 (5%) Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQE------YLTRATQRYYGKTPMQIINEIRIN 228 +++ + H ++F E ++M++L + ++ YL+ YGK+P+ +NE+R+ Sbjct: 166 QNSSRECHKVKRFIEHNYQSMISLDSLAENCSLSKYYLSHRFAELYGKSPIAYLNEVRLA 225 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 A+ L TN+S+ +IA G+SS S F ++F+K +P+ +RK Sbjct: 226 SARDLLLTTNHSIEEIAGCIGFSSTSYFSQSFQKNFHESPQQFRK 270 >UniRef50_C3R8A9 Sensor protein n=2 Tax=Bacteroides RepID=C3R8A9_9BACE Length = 1441 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 55/101 (54%) Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 ++ ++ + K Q + +E++ + R + G TP+ ++ ++R+ A + Sbjct: 1338 IQRVIQVVESKLQEQDFKIEDLADTMKMGRTVFYRKVKSILGVTPIDLVKDMRVKRAIQL 1397 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L+ NY+++ +A+ +G+SSP F + FK+L + TP Y+ K Sbjct: 1398 LDSGNYNISQVAYMSGFSSPQYFSRVFKELKNCTPSEYKTK 1438 >UniRef50_C6XTR7 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XTR7_PEDHD Length = 323 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 3/90 (3%) Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 +S + MVA+S ++ E R ++ G + ++ I +++ F KKQLE ++ +I + Sbjct: 234 YSVDEICEMVAVSRRTFE---RHFKQCTGNSILEYIQRVKVEFVKKQLEAGKKTINEIIY 290 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 EAGY+ F K FK+ T +P YRK+ Sbjct: 291 EAGYTDIDAFRKVFKRFTDLSPIGYRKRFA 320 >UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIX6_9CLOT Length = 330 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 27/262 (10%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH HD++E V G + L GD + + + H F ++N+ + Sbjct: 70 LHNHDFFELLYVYKGSCVNMTREGEMPLNEGDLLLLNPNALHAPFAPGEENIVVNIIVRP 129 Query: 99 RFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNF---RETGLEELVEMVTFYVI 155 FE L L+ + S + +L ++ S L F E ++ +++M+ + Sbjct: 130 SVFENVMLSLIADNKLFSNFFVN---YLYHINMTTSYLYFPKDEEHPIKFIMDMLIAEYL 186 Query: 156 NRLRHYRE--EQVIDDVPQWLKSTVEKMH--DKEQFSESAL---------ENMVALSAK- 201 + Y + ++ + L + KM+ + E F +S L +N+ ++ K Sbjct: 187 SHDICYTNVMQAILVQLFAALARSYRKMNKVEIEDFEKSQLVVDIISHINQNIATVTLKE 246 Query: 202 -------SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 S Y+++ Y GK +I++ +R++ AKK LE + ++T+I G+S + Sbjct: 247 LSERFQYSSSYISKLINSYTGKNFSEIVHFLRLDRAKKYLENKDLTITEITQAVGFSDSN 306 Query: 255 LFIKTFKKLTSFTPKSYRKKLT 276 F K FK + +P YRK++ Sbjct: 307 YFYKVFKNRFNLSPSEYRKQVC 328 >UniRef50_Q8NYT6 Uncharacterized HTH-type transcriptional regulator MW0077 n=54 Tax=Staphylococcus aureus RepID=Y077_STAAW Length = 745 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 6/140 (4%) Query: 133 ISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 +S L ++ ++ L+ M+ + + R H + + DD + +E +H E S S L Sbjct: 121 LSKLTEQQLVIQLLMHMIHY--VPRTYHSNQSILNDDKVNQVCDYIE-LHFHEDLSLSEL 177 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 V S + +L++ G +N RI AK L T+ ++TDIA + G+SS Sbjct: 178 SEYVGWS---ESHLSKKFTESLGVGFQHFLNTTRIEHAKLDLTYTDETITDIALQNGFSS 234 Query: 253 PSLFIKTFKKLTSFTPKSYR 272 + F +TFK T TPK YR Sbjct: 235 AASFARTFKHFTHQTPKQYR 254 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/258 (20%), Positives = 112/258 (43%), Gaps = 23/258 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA---------- 88 LH HD E LV G ++ + L+ G+ +F+ G H + G Sbjct: 35 LHWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHSGYVVGGKPCSFDAVVFH 94 Query: 89 TRILNVGISKRFFEQHYLPLLPYCF-VASQVYRTNNA---FLTYVETVISSLNFRETGLE 144 + + + G F+++ P+L + V + + R L ++ + + E Sbjct: 95 SSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASE 154 Query: 145 ELVEMVTFYVINRLRHYREEQVIDDVPQ------WLKSTVEKMHDKEQFSES-ALENMVA 197 ++ + F ++ +L + V Q LK+ +E + ++ ++E L+ + Sbjct: 155 LTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYI--EQNYAEPIPLQKLAE 212 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 L+ S+ Y R +R K+P++ +N R+ A +L T+ + ++A + G++S S F Sbjct: 213 LARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFN 272 Query: 258 KTFKKLTSFTPKSYRKKL 275 F++ TP+ YR +L Sbjct: 273 TVFRQRFGCTPREYRSRL 290 >UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ21_9GAMM Length = 235 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 27/242 (11%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-RILNVGISK 98 HQH++++ +G E+ G+R+ + V+IP G HQ + E+G++ + L + S Sbjct: 10 HQHEWHQLLYATSGVLIVEVLGERLFIPPEKAVWIPQGHEHQVYSEYGSSLKSLYIEHSD 69 Query: 99 RFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL 158 +F + +L + Q+ + F S+++ G E + + ++RL Sbjct: 70 QFSDWQTSKVLKITPLLKQLILEASTF---------SVHYSRQGYEAELIALMLASLHRL 120 Query: 159 RHYREEQVIDDVPQWLKS-----TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRY 213 E D +P W S + +++ ++ + + LS S+ L R + Sbjct: 121 -----ETDHDQLP-WPASRDLYRLCQMFYEQPSLRKTTAKLAIELSV-SKRTLERKFMKE 173 Query: 214 YGKTPMQIINEIRINFAKKQLEM--TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 G + Q + ++R K LE+ YS+T IA E GY S + FI F+ T +P + Sbjct: 174 TGMSVQQWLLQLRF---LKSLELLSAGYSITHIALELGYGSSAAFIHMFRDKTGVSPGQF 230 Query: 272 RK 273 K Sbjct: 231 IK 232 >UniRef50_A9KSI4 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSI4_CLOPH Length = 535 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 15/146 (10%) Query: 135 SLNFRETGLE-ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALE 193 S+N + G +L + +T ++N + +++I+D Q S + D +QF ++ Sbjct: 395 SMNANDIGSAYKLYQYLTDVIVNSM-----DKIIEDKRQ---SDTRPIRDAKQFIQTNYT 446 Query: 194 NMVALSAKSQE------YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + L S + Y + ++ G T ++ ++E+RIN AK+ L+ TNYSV I Sbjct: 447 RQITLDEVSGKVGFNATYFSSLFKKETGYTFLEYLSEVRINKAKELLKDTNYSVMAICEH 506 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRK 273 GYS F KTF K T+ P YRK Sbjct: 507 VGYSDIKHFTKTFVKHTNLKPNEYRK 532 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 111/266 (41%), Gaps = 35/266 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD+ E L+ G + G + GD VF+ G +Y+ ++N+ Sbjct: 55 HTHDFCELALITRGSAMHWLEGAEFPITAGD-VFVLQGQQSHYYYDLQKLEMINIMFDP- 112 Query: 100 FFEQHYLP-----LLP---YCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEL----- 146 EQ LP +P F+ ++R + F +++ S+L E EL Sbjct: 113 --EQLNLPETRLRKIPGYRALFLLEPLFRKQHRFTSHLHLSRSTLAHSERIAVELDNEVR 170 Query: 147 --------------VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 VE+V + ++RL Y+E + + + V + E + Sbjct: 171 GKMEGYEAAMFAKFVELVVY--LSRL--YQETESTNAEALLRVAKVIGSIEDEFTKPWKV 226 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 E+ A++ S+ R + G+TP+ + ++RI + L T S+++IAFE G++ Sbjct: 227 EDFAAMAHMSRANFMRVFRTATGETPINYLLQLRIQKSMTLLTSTKLSISEIAFEVGFND 286 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTEF 278 + + + FK +P +YR+ T F Sbjct: 287 SNYYTRQFKASQGISPLAYRRTHTGF 312 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 46/73 (63%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S+ YL R + +P++ IN++R++ A + L T+ SV++IAFE G+ + S FIK FK Sbjct: 213 SKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFK 272 Query: 262 KLTSFTPKSYRKK 274 K TP +RK+ Sbjct: 273 KYMHTTPLKFRKQ 285 >UniRef50_P45008 Uncharacterized HTH-type transcriptional regulator HI1052 n=17 Tax=Haemophilus influenzae RepID=Y1052_HAEIN Length = 298 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 107/263 (40%), Gaps = 39/263 (14%) Query: 47 FTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR---FFEQ 103 F L+ G + +N K+ L+ GD F+P H Y A + ++ K FE Sbjct: 41 FHLIEQGECWLTLNEKQFHLKEGDVFFLPQNQPHSMHY--SANKRADIPTKKSHQGLFEL 98 Query: 104 HYL-----PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMV-------- 150 H + L +C Y +A LT +N +T + LV++ Sbjct: 99 HQIGRGTPDLKMFC---GNFYYQQDALLTASMPEYLHINLCDTPIHPLVQLFLQEAQKND 155 Query: 151 -----------TFYVINRLRHYREEQVIDD------VPQWLKSTVEKMHDKEQFSESALE 193 +I LRH ++ +I+ + L + + + + Q ++ +E Sbjct: 156 AGTKSVVDALSNVLLIYILRHAIQQNLIEQGILFALQDKRLNTALIAILQQPQ-NDWHIE 214 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + L+ S+ R Q++ G +P + + ++R+ A L+ + SV IA E GY S Sbjct: 215 QLAELATMSRANFIRIFQQHIGMSPGRFLTKVRLQSAAFLLKQSQQSVLAIALEVGYQSE 274 Query: 254 SLFIKTFKKLTSFTPKSYRKKLT 276 + F K FK +P YRK ++ Sbjct: 275 AHFCKVFKNYYQLSPSQYRKSVS 297 >UniRef50_B3XR19 Transcriptional regulator, AraC family n=2 Tax=Lactobacillus RepID=B3XR19_LACRE Length = 311 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 3/116 (2%) Query: 162 REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 +E Q+ D+ +++ V +K F+ S L + +S+ Y R ++ YG TP+ Sbjct: 185 KEAQISRDLVIAIENRVNNDDEKPSFNFSDLCKELGISSG---YGHRVFKKVYGTTPLHF 241 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 I+ + A++ LE + S+ ++A+ G ++ S+F K FKK + ++P YRK++ + Sbjct: 242 IDREKYKKAQRLLEYSGNSIEEVAYMVGAANVSIFSKQFKKWSGYSPSEYRKQIIK 297 >UniRef50_UPI0001787EF3 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787EF3 Length = 298 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H KE F +ALE + A Y+ R +R+ GKTP+Q + +R+ AKK L T + Sbjct: 197 HWKEPFERAALEEKLHFQAS---YIARCMKRHIGKTPLQYVLHLRLEEAKKLLGGTVLGI 253 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++IA G + + F TP +YR+ L Sbjct: 254 SEIAERVGIRDSNYMTRLFTAKVGMTPGAYRQML 287 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 47/84 (55%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 LE + + S Y ++ + ++G T + + +RI AK+ L T+ S+ +I F GY+ Sbjct: 427 LEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAETDQSLKEICFSVGYN 486 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKL 275 P+ F + FKK T +P YRKK+ Sbjct: 487 DPNYFSRVFKKQTGLSPSEYRKKV 510 >UniRef50_B2HU78 AraC-type DNA-binding domain-containing protein n=14 Tax=Acinetobacter RepID=B2HU78_ACIBC Length = 342 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 41/69 (59%) Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 ++ G + QI NEIR + A ++L +N S+ DI+ + + PS F + FKK T +P +Y Sbjct: 274 KHEGVSYQQIKNEIRCDIAIERLSKSNDSIQDISEDLNFHDPSAFHRAFKKWTGVSPGAY 333 Query: 272 RKKLTEFNQ 280 R LT F Q Sbjct: 334 RDNLTTFKQ 342 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 11/252 (4%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY--EFGATR 90 +E++ H H YYE + G ++ + E G+ + P S H S+ E A + Sbjct: 23 SENMMKSHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYSMHHSYAPSEDQAFQ 82 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMV 150 + V +++ L L+ A +Y + + ++ + ++ ++L ++ Sbjct: 83 RIVVYFTEKAIGD--LTLIEKMRHAGGLYHPDRRMSHQIHGLLGMMLMEQSETDDLHDIT 140 Query: 151 TFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV--ALSAK---SQEY 205 ++ + + V P KS V K+ E S+ +E++ L+ + SQ Y Sbjct: 141 METILRAILLLLLKDVRTLNPTVNKSRVIKV--IEYISDHYMEDLRLDELAGRFYVSQYY 198 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L R ++Y +T Q IN RI A++++ TN+ + +A G++S + F + F+ +T Sbjct: 199 LCREFKKYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASSTHFSRVFRSVTG 258 Query: 266 FTPKSYRKKLTE 277 TP ++RK ++ Sbjct: 259 MTPTAFRKSCSQ 270 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 21/255 (8%) Query: 40 HQHDYYEFTLVLTGRYFQ-EINGKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILNVGIS 97 H H+ E + VL+G+ I+G E+GD V I + H S + + + IS Sbjct: 32 HWHESIEISYVLSGKIDDIYIDGIHYTSEQGDIVLINSNAIHSFSVVQGKNRKAVTFFIS 91 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTN-------NAFLTYVETVISSL-NFRETGLEELVEM 149 F + +Y + F + + + N ++++I + N R+ L + + Sbjct: 92 YEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIFNELRENLDSIIRAFSNLRDDSLAHIKVI 151 Query: 150 -----VTFYVINRLRHYREEQVIDDVPQWLKSTVE-KMHDKEQFSESALENMVALSAK-- 201 + + ++ + ++ ++L E + KE +S+ ++ +SAK Sbjct: 152 GLSYELIYLLLKNFKISKKSFGEIKTKKYLDRLTEITNYIKENYSQDL--SIDIISAKFN 209 Query: 202 -SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 S EYL+R ++Y G T IN +R+ + + L T+ S+T+IA E G+ + F K F Sbjct: 210 LSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNTDQSITEIALEHGFPNEKSFNKVF 269 Query: 261 KKLTSFTPKSYRKKL 275 K + TP YRKK+ Sbjct: 270 KTFYNITPNQYRKKI 284 >UniRef50_C0EHT5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHT5_9CLOT Length = 318 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 36/264 (13%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL-NVGIS 97 LHQHD++E V G I+ K+V L +GD I + H + ++ N+ I Sbjct: 58 LHQHDFFEMVYVHEGYCDNMIDNKKVSLTKGDICLINTYAVHTLLCDDPDNAVIFNIMIG 117 Query: 98 KRFFEQHYLPLLPYC-FVAS------QVYRTNNAFLTYVETVISSLNFRETGLEEL-VEM 149 + LL Y FVA + R ++ +L + ++ +E L V++ Sbjct: 118 AEMMNAAHFRLLSYNDFVADFFFHSLEKQRDDDNYLIFHQSE------KENAANNLCVQL 171 Query: 150 VTFYVINRLRHYREEQVI---DDVPQWLKSTVEKMHDKEQFSESALE------------N 194 + Y + Y+E +++ D + L + +KM D + +L+ N Sbjct: 172 INEYYGHEEDLYQESKILHLFDCILIELTRSYQKMKDHPLGKKDSLKVSDMIYYIENHYN 231 Query: 195 MVALSAKSQ------EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 V L + + ++ +R + G+T ++ ++R+ AK+ L+ + S+T+I + Sbjct: 232 SVTLKSIADYFGYHPKHFSRIIHQATGQTFTDLLLDLRMRCAKELLQNNSLSITEIMHQV 291 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYR 272 GY + F F+K +PK YR Sbjct: 292 GYHNYKWFSNQFQKKFDMSPKKYR 315 >UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XH00_CALS8 Length = 275 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 30/252 (11%) Query: 43 DYYEFTLVLTGRYFQEIN-GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF 101 +Y F +L G + EIN ++ + FV +P S + E T+ L + I + Sbjct: 35 NYLRFCSILQGDKYVEINESEKFKYDSNSFVILPPYSRVKLEIE-EKTKALVIEID-SYL 92 Query: 102 EQHYLPLLPYCFVASQVYRTNNAFL----------TYVETVISSLNFRETGLEELVEMVT 151 H L L F ++ NN F TY + ++ + R+ E L+++ T Sbjct: 93 INHVLSKLKIEFEPYELGNVNNIFFVGKYSPDLTQTY-KKIVDTFFSRKVNREFLLDLYT 151 Query: 152 FYVINRLRHYR-EEQVIDDVPQWLKSTVEKMHD----KEQFSESALE-NMVALSAKSQEY 205 + + YR E++I+D + ++ +++ + + S+ A E NM +EY Sbjct: 152 QEFVYDIFKYRGAEKIINDKNSEIYHILDYINNNYLRRLKISDIAKEFNM-------KEY 204 Query: 206 -LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 TR +++ GK+P + I ++++N AK+ L+ N VTD+ ++ GY + S FIK FK Sbjct: 205 EFTRYFKKFTGKSPKEYIKDLKLNKAKELLKFEN--VTDVCYDIGYENISHFIKEFKNKF 262 Query: 265 SFTPKSYRKKLT 276 TP Y+K L Sbjct: 263 GVTPNLYKKALN 274 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 48/71 (67%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S++Y++R ++++ T + +N +R+ +AK L+ TN S+TD+A +G+ + S FI++FK Sbjct: 210 SEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVALSSGFPNVSYFIRSFK 269 Query: 262 KLTSFTPKSYR 272 + TP SYR Sbjct: 270 ESYGKTPFSYR 280 >UniRef50_C6D2P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2P5_PAESJ Length = 189 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%) Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + H EQ + S L +++ LS +L R +R G TP I +IRI A K L T+ Sbjct: 94 EAHYYEQLTLSHLADVLHLSPY---HLQRTFKRLTGLTPAAYIQQIRIREAMKLLASTHL 150 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 VTDIA + GY++ + F F+ +T TP YR Sbjct: 151 PVTDIAGQVGYTNAAHFTTRFQNVTGLTPTQYR 183 >UniRef50_C0FPB8 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPB8_9FIRM Length = 304 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 31/266 (11%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ--SFYEFGATRI------ 91 H H Y E L+G + +NG GDFV I HQ + G + I Sbjct: 35 HFHYYIEMLYALSGHFRIYLNGIYHEFAAGDFVLINSREVHQIDALSSEGGSYIVVRFLP 94 Query: 92 --LNVGISKRFFEQHYLPLLPYC--------FVASQVYRT-NNAFLTYVETVISSLNFRE 140 + G+++ FE YL LP+ ++S + ++A + +I ++ Sbjct: 95 ELIYDGMTQSHFELKYL--LPFITENSIYEKVISSSILNAKHSAIPGLMNEIIRESEEKQ 152 Query: 141 TGLEELVE----MVTFYVINRLRHYREEQVIDD-----VPQWLKSTVEKMHDKEQFSESA 191 G E ++ + +++ EE +++D + Q L + M + S SA Sbjct: 153 YGYELAIKNHIGGIFLWLLRYWHANGEEPLLEDFENQQLKQQLSPALTYMITNYEKSISA 212 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 E M L S Y +R+ R +NEIRI A+K L T +VT+IA G+ Sbjct: 213 AE-MAKLCNLSYSYFSRSFNRLLHMNFSDYLNEIRIREAEKLLVSTTQNVTEIASAVGFC 271 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLTE 277 + S FIK F K +PK Y+K++ + Sbjct: 272 TTSYFIKQFTKYLHVSPKQYQKQMRQ 297 >UniRef50_A9E3W0 Polyphosphate kinase n=1 Tax=Kordia algicida OT-1 RepID=A9E3W0_9FLAO Length = 566 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA----KKQLEMTNYSVTDIA 245 L N+ + YLT+ + GKT Q +NE+RIN+A K + Y++ IA Sbjct: 472 CTLANLAKKVKTNPTYLTKILKEEKGKTFYQYLNELRINYAITRLKADKQFRKYAIKHIA 531 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 E GY SP F K FKK T P Y K+L + N Sbjct: 532 LEVGYKSPESFTKHFKKATGIYPSYYIKELEKRN 565 >UniRef50_A2TYF7 Regulatory helix-turn-helix protein, AraC family n=1 Tax=Polaribacter sp. MED152 RepID=A2TYF7_9FLAO Length = 290 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 43/289 (14%) Query: 9 PEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 P TAR Q+LF + E+++ H +YY L+ G+ I+ + Sbjct: 17 PNFCTARLQELFK--------HPPLETMTTFHSLNYYTLLLITEGKGKHNIDYTDYEYSK 68 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY 128 G + I H+ FY+ A L FF++ +L +Q + N LT Sbjct: 69 GTLLAIRRNQVHR-FYKSDAKGYL------IFFKEDFLNRYLNDAEVAQSIQAFNELLTS 121 Query: 129 VETVISSLNFRET-----GLEELVEMVTFYVINRL-----------------RHYREEQV 166 +T I + E GLE ++ NR+ R + + ++ Sbjct: 122 PKTQIENQELVEVIKLAQGLEMEATFISDEYSNRINRSLLHVLLSLVHRIKSRGFNKVEL 181 Query: 167 IDDVPQWLK--STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 +++ +++K + VEK + K + E +M+ S+K L K I+E Sbjct: 182 NNNLQEFIKFQNLVEKNYHKTKKVED-YADMMGFSSKK---LNSIVNFISNKPVKAFIDE 237 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + I AKK + TN S ++AF+ G++ P+ F K FKK TS+TP++++K Sbjct: 238 VVIIKAKKNILHTNMSAKEVAFKLGFNDPANFYKYFKKHTSYTPETFKK 286 >UniRef50_C7R5W7 Transcriptional regulator, AraC family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R5W7_KANKD Length = 461 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 50/91 (54%) Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 ++++L++ + YL + Q+Y G +P+ N +R+ FAK+ L T +TDIAF Sbjct: 100 LNQTSLQDFSESMGITDRYLRKLFQQYLGVSPITYANHLRLMFAKQLLHQTQLPITDIAF 159 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 AG++S F +FK +P + R KL + Sbjct: 160 IAGFNSVRRFNDSFKATMKLSPSNLRNKLNK 190 >UniRef50_Q0SUF5 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=Q0SUF5_CLOPS Length = 77 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 41/74 (55%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S +Y R KTP++ +N RI + ++L T S+T+IA G++ S FIKTFK Sbjct: 2 SPKYFCRFFHEMINKTPIEYLNYYRIEISCEKLIATELSITEIALNCGFNDVSYFIKTFK 61 Query: 262 KLTSFTPKSYRKKL 275 K TPK Y K L Sbjct: 62 KHKGLTPKQYLKSL 75 >UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197BA84 Length = 292 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 50/85 (58%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 ALE++ + L R +++ GK + + E+RI++A K L N +++ +A++ GY Sbjct: 208 ALEDIACNVGMNPSALCRYYKKHTGKRMFEYLTELRISYATKLLINKNINISQVAYDCGY 267 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKL 275 +S S F FK++T +TP Y +KL Sbjct: 268 NSLSHFNHQFKQVTGYTPSEYAQKL 292 >UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 RepID=A0LXA2_GRAFK Length = 907 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 67/127 (52%) Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 E + +Y N++ R+E + ++LK + + + + ++E++ A S+ L Sbjct: 781 EKLRYYYTNKIDEVRDENFANAEQKFLKDLNSLIDNNLRNTGFSVEDLAARLKISRVQLY 840 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R + G + + IN R+N AK L+ ++ ++++IA+E GYSSP F +FKK + Sbjct: 841 RKVKALLGVSISEYINSQRLNKAKNLLQDSDMNISEIAYEVGYSSPGYFSTSFKKEYGIS 900 Query: 268 PKSYRKK 274 PK + + Sbjct: 901 PKELKSR 907 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 23/251 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H +YEF + +G IN +E GD +F+ G H++ Y V IS Sbjct: 20 HWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPVN-ERVTIS-- 76 Query: 100 FFEQHYLPLLP---------YCFVASQVYRTNNAFLTYVETVISSLNFRETG---LEELV 147 F+ YL + Y F S+V N + VE +I + + ETG L+ Sbjct: 77 -FDGEYLDSMKELCGEENVEYIFRNSKV-TVPNGNRSRVEELIRRIEYEETGQDGFSPLM 134 Query: 148 EMVTFY-VINRLRHYREEQVIDDVPQWLKSTVEK----MHDKEQFSESALENMVALSAKS 202 + FY ++ L +E + + + T+E ++D Q + LE + LS S Sbjct: 135 KKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQ-NPITLEEVAELSHMS 193 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 Y +R + G + + IRI A + L + SVT+IA G+ + F F+K Sbjct: 194 PAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAFRK 253 Query: 263 LTSFTPKSYRK 273 +P+++RK Sbjct: 254 AKGVSPRAFRK 264 >UniRef50_Q15ZQ2 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15ZQ2_PSEA6 Length = 328 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%) Query: 185 EQFSES----ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 E F++S AL N + +S ++ R Q+ G+ P + + +RI AK +L T S Sbjct: 228 EHFTQSVELQALANQIGMSRRT---FIRRFQKATGELPSRYLQRLRIEAAKHRLGNTQDS 284 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + I GY S F K FK LT TP+ YR++L Sbjct: 285 IKTIGMGVGYRDISSFSKVFKSLTDVTPREYRQRL 319 >UniRef50_A5G651 Two component transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G651_GEOUR Length = 266 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + S + ++ ++ G T +N IRI A L+ TNYS+TD+AFE GY + F K Sbjct: 184 AGMSMYHFSKIFKKIMGITYQDHLNNIRIETAMVLLK-TNYSITDVAFEVGYEDITHFGK 242 Query: 259 TFKKLTSFTPKSYRKKL 275 TFKK+ + P YRK + Sbjct: 243 TFKKIVGYPPSKYRKNV 259 >UniRef50_A4AUT1 Probable transcriptional regulatory protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AUT1_9FLAO Length = 287 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 4/156 (2%) Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEM-VTFYVINRLRHYREEQVI---DDVPQWLKS 176 TN F T +E++ L E +ELVE+ + N + + Q++ + + Q KS Sbjct: 127 TNEVFKTLIESIFHYLKQGEEIPKELVEIKFKELLFNIVLNSNNNQLLFFFNSITQDAKS 186 Query: 177 TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 +E + + + + + L KS R + + TP + + + R+ +K L Sbjct: 187 NIENIMTENFQYDLKIADFAKLCGKSLSSFKREFKECFNTTPSRWLIDKRLEHSKALLIG 246 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 TN +V++I +E G+ + S FI+ FKK + TPK +R Sbjct: 247 TNLTVSEIGYECGFKNNSHFIQAFKKKVNVTPKKFR 282 >UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH5_9FIRM Length = 302 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 44/84 (52%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L+++ + S Y+ + Y +PM +N +RI A++ L T SV+DIA + G+ Sbjct: 218 LDSLCSTVNLSPSYIIKLFNHYTSLSPMAYVNRVRIEAAREMLAETPLSVSDIAAQTGFK 277 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKL 275 F K FK +T TP+ YR L Sbjct: 278 DSFYFSKKFKAVTGITPRQYRNSL 301 >UniRef50_Q0I0N1 Transcriptional regulator, AraC family with amidase-like domain n=7 Tax=Shewanella RepID=Q0I0N1_SHESR Length = 347 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%) Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 F ++ + +++VI +V QW++ H E + + AL ++ L R + Sbjct: 214 FMTMDLMTSSHKDEVIWNVQQWMQH-----HLTEPLLLDDIADKFALGKRT---LIRRFK 265 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 + +TP + +R++ AK+ LE T+ + ++ GY S F K F +LTS TP++Y Sbjct: 266 KALNETPASYVQRLRVDEAKRLLETTSLGLEEVVTRVGYEDVSSFRKLFIQLTSLTPRAY 325 Query: 272 RKK 274 R++ Sbjct: 326 RQR 328 >UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C647_ACAM1 Length = 204 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 49/90 (54%) Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 D +E L ++ L SQ + R ++ G++P Q + R+ AK L+ TN + Sbjct: 113 DAHLGNEITLADLAVLVDISQFHFGRLFKQSLGRSPYQYLMLQRVERAKTLLKRTNQPIV 172 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 +IA E G++S S F + F+++T TPK YR Sbjct: 173 EIALECGFNSHSQFGRKFRQMTGMTPKVYR 202 >UniRef50_C0AAT3 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AAT3_9BACT Length = 341 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Query: 196 VALSAK-SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 +A AK S+E++ R ++ G+T + +RI A++ L + VT+IA G+SSP+ Sbjct: 249 IAWQAKLSREHVARTFRQQTGQTVFDYLARVRIEAAQQLLTDSALPVTEIAHRTGFSSPT 308 Query: 255 LFIKTFKKLTSFTPKSYRKKL 275 LF + FK+L TP++YR+++ Sbjct: 309 LFGRVFKRLIGQTPQAYRQEV 329 >UniRef50_A8SR16 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SR16_9FIRM Length = 306 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 +D VP +L S +M DK +L+++ A S+ + R ++G++PM+ +N R Sbjct: 189 MDCVPSYLLSVKNQM-DKNYAEPLSLDDLEATYRISRYRICREFSFHFGESPMRYLNSRR 247 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 I+ AK+ L T+ SV ++ + G + + FI FKK T TP S+++ Sbjct: 248 IDAAKRLLLTTDLSVHEVGSQVGIENTNHFINLFKKDTGTTPLSFKQ 294 >UniRef50_A5N5Q2 Transcriptional regulator n=3 Tax=Firmicutes RepID=A5N5Q2_CLOK5 Length = 274 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 21/244 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT---RILNVG- 95 H H+YY + G+ + + + GD + +H G T R +N+ Sbjct: 31 HFHEYYVIGFIENGQRYLSCKNEEYTIAPGDLLLFNPRDNHTCEQIDGKTLDYRCINIQP 90 Query: 96 --ISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV--EMVT 151 +SK FE LPY SQV AF + + +++ L+ E+ E + Sbjct: 91 EIMSKVVFEIMNRDYLPY--FTSQV-----AFHSELVSLLKELHLMIMQEEKDFRKEELF 143 Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEK----MHDKEQFSESALENMVALSAKSQEYLT 207 F+++++L EQ I P+ +ST K ++ L+++ L+ S+ YL Sbjct: 144 FFLLDQLIEEYTEQDITS-PKVEQSTEAKAICEFLEQNYMKNITLDDLSNLTGLSKYYLL 202 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R+ + G +P + IRI+ AKK LE + D+AF+ G++ S F FKK T Sbjct: 203 RSFTKQKGISPYSYLETIRIDKAKKFLEQGVLPI-DVAFQTGFTDQSHFSNFFKKFIGLT 261 Query: 268 PKSY 271 PK Y Sbjct: 262 PKQY 265 >UniRef50_D2LZT6 Two component transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZT6_BACS4 Length = 512 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H E S L V LS Y+++ + G + + E RI AK+ L+ + S+ Sbjct: 418 HSHEDISLDKLAKKVGLSPI---YMSKLFKEKLGVNYIDFLTECRIEKAKQLLKRPDKSI 474 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +I F+ GY P+ F K FKK+ +PK YRK + Sbjct: 475 KEITFDVGYHEPNYFSKVFKKMCGVSPKEYRKSI 508 >UniRef50_C4Z408 Two-component system, response regulator YesN n=15 Tax=Clostridiales RepID=C4Z408_EUBE2 Length = 266 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 22/244 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNVGISK 98 H H+ E V G + + +E+GD F+ P HH + G + + + IS Sbjct: 25 HLHNALEIVCVTNGTLELGVGQELYHMEKGDIGFVFPDIIHHYQIFSPGVNKAVYI-ISP 83 Query: 99 RFFEQHYL----------PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE 148 F Y P++ V +VYR NA L I+ + + ++ Sbjct: 84 PFAIGKYAEIIQTMAPDYPIIKAEMVEPEVYRAINAILDTDHMDIAVI-------QAYLQ 136 Query: 149 MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTR 208 +V I +L+ + V + + + ++ FS L++M S+ L+R Sbjct: 137 IVIARCIGKLKLVEKGDVGSKDLVYQAVSYVSGNFRKNFS---LDDMARDLGVSKYVLSR 193 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 + + + Q +N+ R+N+A +LE T+ ++T+I +++G+ S F + FK+ TP Sbjct: 194 TFSKTFHRNFNQYLNDTRLNYACYRLENTSDAITNICYDSGFESQRTFNRVFKERYKVTP 253 Query: 269 KSYR 272 YR Sbjct: 254 SEYR 257 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 46/84 (54%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L+ + A + S +Y R +TP+ +N RI A QL T+ S+T+IA+ G+ Sbjct: 199 TLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEIAYRNGF 258 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 + S FI+TFKK TP Y+++ Sbjct: 259 NDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C6D8S9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8S9_PAESJ Length = 534 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 45/70 (64%) Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 YL+R ++ GK+ + + R+ + ++L++TN+ ++DIA GY+S S F K FKK T Sbjct: 460 YLSRLFRKETGKSLTDYMVDRRMFRSIRELKLTNHKISDIAISVGYASFSHFSKQFKKST 519 Query: 265 SFTPKSYRKK 274 TP+ YRKK Sbjct: 520 GMTPQDYRKK 529 >UniRef50_A6TGX0 Regulation of superoxide response regulon n=6 Tax=Klebsiella RepID=A6TGX0_KLEP7 Length = 122 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 9/111 (8%) Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 ++ V+ D+ W+ + ++K + ++++ +S S +L R + Y+ ++PM+ I Sbjct: 13 QQSVLSDLLLWIDNNLDK--------KLTVDDLSDISGYSPWHLFRLFRHYFDRSPMEYI 64 Query: 223 NEIRINFAKKQLEMT-NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + R++ + L T Y + DI GY S F +TFKK + TP YR Sbjct: 65 RQQRMSLCCRLLLTTPGYRIVDICMMVGYDDLSAFNRTFKKYHALTPTQYR 115 >UniRef50_Q7P089 Probable transcriptional regulatory protein n=1 Tax=Chromobacterium violaceum RepID=Q7P089_CHRVO Length = 295 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 43/78 (55%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E+ L+ +S R +R Y TP + I E +++ A + L NYSVTD A E GY Sbjct: 209 IEDYALLTGRSVSTFIRDFRRSYNTTPNRWIIEKKVDIAHQLLTAKNYSVTDAAAEVGYE 268 Query: 252 SPSLFIKTFKKLTSFTPK 269 + S FIK +K+ TPK Sbjct: 269 NTSHFIKVYKQRYGVTPK 286 >UniRef50_C2Z9K1 Transcriptional regulator, AraC n=2 Tax=Bacillus cereus RepID=C2Z9K1_BACCE Length = 416 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%) Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + + L+++ L S YL+ ++ G + I R++ AKK L +TNYS+ DI+ Sbjct: 321 YDDIKLDHLAQLCHLSPNYLSSLFKKEVGTPLSEYIQRQRVDEAKKLLLLTNYSILDISM 380 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYR 272 ++ S FIK FKK T TP+ +R Sbjct: 381 WLNFNDQSYFIKIFKKYTGLTPRQFR 406 >UniRef50_Q393N4 Transcriptional regulator, AraC family with amidase-like domain n=3 Tax=Burkholderia RepID=Q393N4_BURS3 Length = 330 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 9/132 (6%) Query: 147 VEMVTFYVINRLRHY-REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 V +F ++R+ H ++ I +W++ H +E FS + L + VA+S ++ Sbjct: 207 VSQDSFIELDRMGHRGHDDATIARAQRWMEK-----HLREPFSLARLSDHVAMSERT--- 258 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L R + G P++ + +RI AK+ L T ++ I GY+ S F + FK+ T Sbjct: 259 LHRRFKDAVGAPPLRYLQTLRIEVAKRLLAETKLAIDTICERVGYADISGFRQLFKRETG 318 Query: 266 FTPKSYRKKLTE 277 +P YR++ T+ Sbjct: 319 ISPGEYRRRFTQ 330 >UniRef50_C6BZC3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZC3_DESAD Length = 293 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 50/85 (58%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +LE + LS +S R ++ + TP + I E R+++A++ L + S+T+I++E+GY Sbjct: 202 SLETVAELSGRSLSSFKREFKKTFNTTPARWIRERRMSWAEQLLRNSAKSITEISYESGY 261 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKL 275 S S F F+K TP+ YR +L Sbjct: 262 ESLSHFSTLFRKNYGVTPREYRAEL 286 >UniRef50_Q24N17 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24N17_DESHY Length = 250 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/242 (19%), Positives = 105/242 (43%), Gaps = 11/242 (4%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 +H H Y F L + +IN + ++ + + + H + R + + I K Sbjct: 1 MHTHPSYLFVLTFNDQVSFKINTREIIAKPNKIMALSPNIPHNEIFTDRFPRYIAIFIDK 60 Query: 99 RFFEQHY--LPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVIN 156 FFE ++P F+ + FL V+ + +N G + ++ + + + Sbjct: 61 EFFEDQLNQYAIVPNIFLQGDFFPVPPGFLYAVKEFLLEVNNDIPGAQSVILATSLKICH 120 Query: 157 RL------RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRAT 210 L Y+++++I + + ++E MH + ++++ + S +R Sbjct: 121 LLIRSMLNLEYKKDKIIYRL--EIDRSIEYMHSNLD-QKITVKSLAKTANMSPSNYSRTF 177 Query: 211 QRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKS 270 ++ G++ + +N+IR+ K+ L + ++T+IA E G+SSP+ +F +P Sbjct: 178 KKETGQSCISYLNQIRLEHVKRLLLEGDKTITEIALECGFSSPAYLSSSFYNRYKLSPTE 237 Query: 271 YR 272 Y+ Sbjct: 238 YQ 239 >UniRef50_A9KKI7 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KKI7_CLOPH Length = 355 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 4/161 (2%) Query: 111 YCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV 170 +C + ++ L VE S RE L E +T + + L H R DV Sbjct: 188 FCCLLAEKLSLKTGCLIDVEPNFSMSAEREEILNETATFIT-QLRSDLLHKRSHTDYTDV 246 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 L +K ++ + L ++ A + S Y ++ + GKT Q EIRI+ A Sbjct: 247 ---LMGMAKKYLEEHYNQDIMLTDLAARTGFSTNYFSQIFKEKMGKTFAQFRTEIRIHKA 303 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 + L + ++TDIA E GY+ + FI+ FK++T TP Y Sbjct: 304 MELLNWSGKNITDIAMEVGYNDSTYFIRVFKEITGQTPSEY 344 >UniRef50_C9A6B7 Transcriptional regulator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A6B7_ENTCA Length = 338 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 39/267 (14%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H+Y E + L G + L++ D + I G+H E AT ++ V +S Sbjct: 70 HVHNYVEIIVPLVGECTVITKNDELKLKQNDLIII--GNHTIHRVEPIATDVIVVNLS-- 125 Query: 100 FFEQHYLPLLPYCFV----------------------ASQVYRTNNAFLT-----YVETV 132 + L Y F+ +YR L +E + Sbjct: 126 -LKDTAFNLNDYHFMYEDRATKNVSSLLFSLLSNEIQGENIYRLFRTHLDTKIHLLLEDI 184 Query: 133 ISSLNFRETGLEELVEMVTFYVINRL-RHYREEQVI----DDVPQWLKSTVEKMHDKEQF 187 I + +T +++ + + RL R EQ + DD P L S + ++ ++ + Sbjct: 185 IQEYYYPDTQSNQIIRLELLTLFGRLIRSAANEQTVIAGEDDGPVNLLSLL--LYIEKNY 242 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + LE M + YL+ +++ G T +++++ R+N A + L TN + IA + Sbjct: 243 AHITLEEMAQHFGFNPNYLSSYLKKHTGLTFIKLVHLQRVNVAAEYLTYTNAPIEQIALK 302 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKK 274 GY +PS F K F+K P YR+K Sbjct: 303 VGYENPSYFYKMFRKHLKILPTEYREK 329 >UniRef50_B9CPJ5 Putative transcriptional regulator n=1 Tax=Staphylococcus capitis SK14 RepID=B9CPJ5_STACP Length = 290 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 46/81 (56%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 + ++ +S S + +RY G TP Q + R+ KQL++T+ +VT++A + G+S Sbjct: 207 MHDLCKISCISSSETIKLFKRYVGMTPFQYLLHYRLEKGAKQLKLTHNNVTEVAMDCGFS 266 Query: 252 SPSLFIKTFKKLTSFTPKSYR 272 + S FI+ FK TPK ++ Sbjct: 267 TTSYFIQMFKDKYKVTPKQFQ 287 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 160 HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 H ++ +I D+ Q+L+ + HD E +L+ + S+EY++R ++ +G T Sbjct: 429 HSKDNHIIHDIAQYLE---QHYHD-----EISLQQIAGKFFLSREYISRKFKQEFGVTLS 480 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + IRI AK L + IA GY F K FKK+ FTP YRKK Sbjct: 481 DFLGRIRIEKAKTLLLNPQIRIAQIAEMVGYQDEKYFSKVFKKMEGFTPNEYRKK 535 >UniRef50_Q2SNN6 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=2 Tax=Gammaproteobacteria RepID=Q2SNN6_HAHCH Length = 344 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 12/148 (8%) Query: 129 VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFS 188 + + +S L+ ++ ++ +TFY ++ + +W++S H E FS Sbjct: 196 LASAVSKLHLFDSKRQQQTPYITFYGYKS----HKDDAVKKAQEWMES-----HYAEHFS 246 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 ++++ AL+ R + G+ P+ + ++R+ K QLE T S +I +E Sbjct: 247 ---VDDVAALAGLGGRTFKRRFKEATGENPINYLQQLRVEAVKHQLETTLKSSNEIIWEV 303 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 GY S F + FK+ T T + YRK+ + Sbjct: 304 GYEDISSFRRLFKRATGCTMEQYRKRFS 331 >UniRef50_D2EHC6 Transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EHC6_PEDAC Length = 306 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 43/74 (58%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S Y R ++ YG TP+ + + R AK L +YSV D+A G ++ S+F K+FK Sbjct: 217 SDGYGYRTFKKVYGMTPLHYVEKQRYRKAKLLLSYLDYSVEDVAEMVGVTNSSMFSKSFK 276 Query: 262 KLTSFTPKSYRKKL 275 K + TP+ YRK+L Sbjct: 277 KWSGQTPRDYRKQL 290 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 104/256 (40%), Gaps = 22/256 (8%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 G H H + E + +G I+ +GD V +P G H++ Y G + IS Sbjct: 26 GAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRTTYN-GKGMHERIVIS 84 Query: 98 KRFFEQHYL------PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEL----- 146 R ++ L+ C + V YV ++ L F +EL Sbjct: 85 FRNEATEWIQNQTGKELMENC-MKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSPAFI 143 Query: 147 ----VEMVTFYVINRLRHYREEQVID--DVPQWLKSTVEKMHDKEQFSESALENMVALSA 200 +E++ F + R ++Y EE VI DV + V + +LE + Sbjct: 144 KVGLIELLLFII--RCKNY-EENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFN 200 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 S+ YL++ + G + I +RI A L TN S+TDIAFE G++ + F F Sbjct: 201 LSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAF 260 Query: 261 KKLTSFTPKSYRKKLT 276 +K +P YRK T Sbjct: 261 RKAKGISPHKYRKNET 276 >UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein n=2 Tax=Flavobacteriaceae RepID=Q1VVA7_9FLAO Length = 306 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 49/84 (58%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E++ + S+ + ++ + G+TPM+ +N R+ AKK + T+ +++IAF G++ Sbjct: 221 VEDLADKACMSKSHFYKSFKNTLGETPMEYLNSERLKQAKKLIRTTSSKLSEIAFSTGFN 280 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKL 275 S S F+ FKK TP +RK + Sbjct: 281 SSSYFVTQFKKQEGMTPSQFRKSI 304 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Ta... 367 e-100 UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae... 336 5e-91 UniRef50_C4X747 Negative transcriptional regulator of cel operon... 329 8e-89 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 190 4e-47 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 189 1e-46 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 187 5e-46 UniRef50_C6D149 Transcriptional regulator, AraC family n=1 Tax=P... 187 5e-46 UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostri... 187 5e-46 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 187 6e-46 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 186 6e-46 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 184 2e-45 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 184 3e-45 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 183 5e-45 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 183 7e-45 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 183 7e-45 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 182 1e-44 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 182 2e-44 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 181 3e-44 UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostri... 180 4e-44 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 180 4e-44 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 177 3e-43 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 177 5e-43 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 176 8e-43 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 176 9e-43 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 175 1e-42 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 175 1e-42 UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus ... 175 1e-42 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 175 2e-42 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 175 2e-42 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 174 3e-42 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 174 3e-42 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 174 4e-42 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 173 4e-42 UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostri... 173 5e-42 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 173 7e-42 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 173 8e-42 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 172 8e-42 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 172 9e-42 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 172 1e-41 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 172 1e-41 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 172 1e-41 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 172 2e-41 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 172 2e-41 UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostri... 171 2e-41 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 171 2e-41 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 170 4e-41 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 170 4e-41 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 170 4e-41 UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 T... 170 5e-41 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 170 5e-41 UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=G... 170 6e-41 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 169 8e-41 UniRef50_Q28QP5 Transcriptional regulator, AraC family n=1 Tax=J... 169 8e-41 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 169 8e-41 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 169 8e-41 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 169 9e-41 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 169 1e-40 UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostri... 169 1e-40 UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=P... 169 1e-40 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 168 2e-40 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 168 2e-40 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 168 2e-40 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 167 3e-40 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 167 3e-40 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 167 4e-40 UniRef50_C0EDY4 Putative uncharacterized protein n=1 Tax=Clostri... 167 4e-40 UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/Xyl... 167 4e-40 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 167 5e-40 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 166 6e-40 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 166 7e-40 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 166 7e-40 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 166 7e-40 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 166 8e-40 UniRef50_C6D720 Transcriptional regulator, AraC family n=2 Tax=B... 166 8e-40 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 166 8e-40 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 166 9e-40 UniRef50_A4EK09 Transcriptional regulator, AraC family protein n... 166 9e-40 UniRef50_C6J044 Transcriptional regulator n=1 Tax=Paenibacillus ... 165 1e-39 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 165 1e-39 UniRef50_Q5WL40 AraC/XylS family transcriptional regulator n=1 T... 165 2e-39 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 165 2e-39 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 165 2e-39 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 165 2e-39 UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostri... 164 3e-39 UniRef50_C0E8H9 Putative uncharacterized protein n=1 Tax=Clostri... 164 3e-39 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 164 3e-39 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 164 4e-39 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 163 4e-39 UniRef50_C0FW59 Putative uncharacterized protein n=2 Tax=Clostri... 163 4e-39 UniRef50_C0EIV3 Putative uncharacterized protein n=1 Tax=Clostri... 163 5e-39 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 163 6e-39 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 163 8e-39 UniRef50_C0EDI9 Putative uncharacterized protein n=1 Tax=Clostri... 163 8e-39 UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostri... 163 8e-39 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 163 9e-39 UniRef50_C0CUZ1 Putative uncharacterized protein n=1 Tax=Clostri... 163 9e-39 UniRef50_D1N7W9 Transcriptional regulator, AraC family n=1 Tax=V... 162 9e-39 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 162 1e-38 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 162 1e-38 UniRef50_C0E9Q1 Putative uncharacterized protein n=1 Tax=Clostri... 162 1e-38 UniRef50_C0EHT5 Putative uncharacterized protein n=1 Tax=Clostri... 162 1e-38 UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=V... 162 1e-38 UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostri... 162 2e-38 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 162 2e-38 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 162 2e-38 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 161 2e-38 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 161 3e-38 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 161 3e-38 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 160 4e-38 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 160 4e-38 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 160 5e-38 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 160 5e-38 UniRef50_C0EGL1 Putative uncharacterized protein n=1 Tax=Clostri... 160 6e-38 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 160 6e-38 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 160 6e-38 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 160 6e-38 UniRef50_C6D0B3 Transcriptional regulator, AraC family n=1 Tax=P... 159 9e-38 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 159 1e-37 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 159 1e-37 UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing... 158 1e-37 UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=C... 158 1e-37 UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=L... 158 2e-37 UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaeros... 158 2e-37 UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=F... 158 2e-37 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 158 2e-37 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 158 2e-37 UniRef50_C6JCM1 Putative uncharacterized protein n=1 Tax=Ruminoc... 158 2e-37 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 158 2e-37 UniRef50_C6PNM8 Transcriptional regulator, AraC family n=1 Tax=C... 158 3e-37 UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Cl... 157 3e-37 UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C... 157 4e-37 UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax... 157 4e-37 UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales ... 157 4e-37 UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D2... 157 4e-37 UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostri... 157 4e-37 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 157 5e-37 UniRef50_UPI0001789626 transcriptional regulator, AraC family n=... 156 5e-37 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 156 5e-37 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 156 6e-37 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 156 8e-37 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 156 9e-37 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 156 1e-36 UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminoc... 155 1e-36 UniRef50_C6IIU9 Transcriptional regulator n=2 Tax=Bacteroides Re... 155 1e-36 UniRef50_C5RQN6 Transcriptional regulator, AraC family n=1 Tax=C... 155 1e-36 UniRef50_A8S1P5 Putative uncharacterized protein n=2 Tax=Clostri... 155 1e-36 UniRef50_D2MNX8 Transcriptional regulator, AraC family n=1 Tax=B... 155 2e-36 UniRef50_C7GHR9 Transcriptional regulator, AraC family n=2 Tax=L... 155 2e-36 UniRef50_C0FPB8 Putative uncharacterized protein n=1 Tax=Rosebur... 155 2e-36 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 154 2e-36 UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus g... 154 3e-36 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 154 3e-36 UniRef50_A8RPB8 Putative uncharacterized protein n=1 Tax=Clostri... 153 4e-36 UniRef50_C7G9P1 AraC-type sugar metabolism regulator n=2 Tax=Lac... 153 5e-36 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 153 5e-36 UniRef50_UPI0001C3636B helix-turn-helix domain-containing protei... 153 7e-36 UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=C... 153 7e-36 UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 T... 153 7e-36 Sequences not found previously or not previously below threshold: UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 192 1e-47 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 182 9e-45 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 182 9e-45 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 179 1e-43 UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=B... 176 9e-43 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 174 2e-42 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 174 2e-42 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 173 6e-42 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 173 8e-42 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 172 9e-42 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 172 2e-41 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 170 5e-41 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 170 7e-41 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 168 1e-40 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 168 2e-40 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 168 2e-40 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 167 3e-40 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 166 8e-40 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 165 1e-39 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 165 2e-39 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 165 2e-39 UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 T... 165 2e-39 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 165 2e-39 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 164 3e-39 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 164 3e-39 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 164 3e-39 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 164 4e-39 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 163 6e-39 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 163 6e-39 UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostri... 163 6e-39 UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostri... 163 7e-39 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 163 8e-39 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 162 1e-38 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 162 1e-38 UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=C... 162 1e-38 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 162 2e-38 UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=V... 162 2e-38 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 162 2e-38 UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=B... 161 3e-38 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 161 3e-38 UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostri... 160 3e-38 UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=P... 160 3e-38 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 160 4e-38 UniRef50_C0EGG3 Putative uncharacterized protein n=1 Tax=Clostri... 160 5e-38 UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=A... 160 5e-38 UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=P... 160 5e-38 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 160 5e-38 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 160 7e-38 UniRef50_C0EAY1 Putative uncharacterized protein n=1 Tax=Clostri... 159 8e-38 UniRef50_UPI0001C3660E AraC family transcriptional regulator n=1... 159 9e-38 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 159 9e-38 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 159 9e-38 UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=... 159 1e-37 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 159 1e-37 UniRef50_C0EDX0 Putative uncharacterized protein n=1 Tax=Clostri... 158 1e-37 UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostri... 158 1e-37 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 158 2e-37 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 158 2e-37 UniRef50_Q0ST06 Transcriptional regulator, AraC family n=13 Tax=... 158 2e-37 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 158 2e-37 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 158 2e-37 UniRef50_A6BF68 Putative uncharacterized protein n=1 Tax=Dorea l... 158 2e-37 UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostri... 158 3e-37 UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 T... 158 3e-37 UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaeros... 157 3e-37 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 157 3e-37 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 157 3e-37 UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacte... 157 4e-37 UniRef50_C0EDG4 Putative uncharacterized protein n=1 Tax=Clostri... 156 6e-37 UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=... 156 7e-37 UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostri... 156 7e-37 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 156 7e-37 UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enteroc... 156 7e-37 UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=B... 156 9e-37 UniRef50_C0ECP6 Putative uncharacterized protein n=1 Tax=Clostri... 156 1e-36 UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=S... 155 1e-36 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 155 1e-36 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 155 1e-36 UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=V... 155 1e-36 UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing... 155 1e-36 UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protei... 155 2e-36 UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Diali... 155 2e-36 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 155 2e-36 UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Ta... 155 2e-36 UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC... 154 3e-36 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 153 4e-36 UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=B... 153 4e-36 UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostri... 153 5e-36 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 153 5e-36 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 153 6e-36 UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Cl... 153 6e-36 UniRef50_C0EH74 Putative uncharacterized protein n=1 Tax=Clostri... 153 8e-36 >UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Tax=Enterobacteriaceae RepID=CHBR_ECOLI Length = 280 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 279/280 (99%), Positives = 279/280 (99%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN Sbjct: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR Sbjct: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 TNNAFLTYVETVISSLNFRETGLEE VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK Sbjct: 121 TNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS Sbjct: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ Sbjct: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 >UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae RepID=D2TGS1_CITRO Length = 282 Score = 336 bits (862), Expect = 5e-91, Method: Composition-based stats. Identities = 241/279 (86%), Positives = 261/279 (93%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEING 61 +Q APEI A EQQLFNGKNFHVFIYNKTES GLHQHDYYEFTLVLTGRY+QEING Sbjct: 4 LQATATAPEITVAHEQQLFNGKNFHVFIYNKTESACGLHQHDYYEFTLVLTGRYYQEING 63 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 KRVLLERGDFVFIPLGSHHQSFYEFG+TRILNVGISK FFEQHY PL+PYCFVASQVYR Sbjct: 64 KRVLLERGDFVFIPLGSHHQSFYEFGSTRILNVGISKHFFEQHYSPLMPYCFVASQVYRI 123 Query: 122 NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 N+AFLTYVETV++SLNFR+TGLEE VE+VTFY+INRLRHYREEQV DD+PQWLK+TVE M Sbjct: 124 NSAFLTYVETVVASLNFRDTGLEEFVEVVTFYIINRLRHYREEQVPDDIPQWLKATVETM 183 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H+KEQF E+ALENM+ALSAKSQEYLTRATQRYY KTPMQ+INEIRINFAKKQLEMTNYSV Sbjct: 184 HNKEQFGENALENMIALSAKSQEYLTRATQRYYRKTPMQLINEIRINFAKKQLEMTNYSV 243 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 TDIAFEAGYSSPSLFIKTFKK+TSFTP SYRKKLT+++Q Sbjct: 244 TDIAFEAGYSSPSLFIKTFKKMTSFTPNSYRKKLTQYSQ 282 >UniRef50_C4X747 Negative transcriptional regulator of cel operon n=8 Tax=Enterobacteriaceae RepID=C4X747_KLEPN Length = 279 Score = 329 bits (843), Expect = 8e-89, Method: Composition-based stats. Identities = 227/279 (81%), Positives = 250/279 (89%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 M QP + EI+TAREQQLFNGKNFHV IYNKTES+SGLHQHDYYEFT+VLTGRY+QEIN Sbjct: 1 MRQPRMMTTEISTAREQQLFNGKNFHVVIYNKTESVSGLHQHDYYEFTVVLTGRYYQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIP+GSHHQSFYEFGATRILNVGIS+RFFE+HYLPLLP+ VASQVY Sbjct: 61 GKRVLLERGDFVFIPMGSHHQSFYEFGATRILNVGISRRFFEKHYLPLLPFGLVASQVYA 120 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 +AFL YVE+VI+SLNFRET +E +E+V+FYVINRLRHYREE V D PQWLK+TVE Sbjct: 121 VQSAFLGYVESVIASLNFRETEFDEFIELVSFYVINRLRHYREEPVADVTPQWLKNTVEA 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDK +F E ALENMV LS K+QEYLTRATQRYYGKTPMQIIN+IRINFAKKQLE+TNYS Sbjct: 181 MHDKLKFGEGALENMVRLSGKTQEYLTRATQRYYGKTPMQIINDIRINFAKKQLEITNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 VTDIA+E+GYSSPSLFIKTFKKLTSFTP SYRK LT N Sbjct: 241 VTDIAYESGYSSPSLFIKTFKKLTSFTPSSYRKHLTSIN 279 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 107/244 (43%), Gaps = 10/244 (4%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 +++ H H+++E + GR I + +L+ +F+ P H SF E R Sbjct: 24 NDNMVRSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFVMHHSFEENDVPFRR 83 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA----FLTYVETVISSLNFRETGLEELV 147 L + + +L ++VY+ A ++ ++ + EL+ Sbjct: 84 LLLYFNPEVIRS--PQILRTLSERARVYKLPRAQSAPIYNLMKDILQEQERDDLYSRELI 141 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSE-SALENMVALSAKSQEYL 206 ++ + +L +E + + + +H E F+E LE + SQ +L Sbjct: 142 TLMVNALALQLVRNSDEAARPEQRNRVTDIINYLH--EHFTEDITLEQLANHFYVSQYHL 199 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 R +RY T +Q I+ +R+ A++ L+ ++YS+T+I+ G+S+ + F + +K +T Sbjct: 200 CREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGM 259 Query: 267 TPKS 270 +P Sbjct: 260 SPSQ 263 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 115/287 (40%), Gaps = 25/287 (8%) Query: 14 AREQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + + V +Y T + LH HD E LV G ++ + L+ G Sbjct: 6 LKEARKHGNPIYPVSLYEITCPSDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAG 65 Query: 70 DFVFIPLGSHHQSFYEFGA----------TRILNVGISKRFFEQHYLPLLPYCFVASQVY 119 + +F+ G H + G + + + G F+++ P+L + Sbjct: 66 EAIFVNSGELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHL 125 Query: 120 R----TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ--- 172 R L ++ + + E ++ + F ++ +L + V Q Sbjct: 126 RREPGPGMELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGY 185 Query: 173 ---WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 LK+ +E + ++ L+ + L+ S+ Y R +R K+P++ +N R+ Sbjct: 186 RIERLKTVIEYI-EQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQ 244 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A +L T+ + ++A + G++S S F F++ TP+ YR +L Sbjct: 245 AASRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 110/288 (38%), Gaps = 22/288 (7%) Query: 10 EIATAREQQLFNGKNFHVFIYNKT-ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 I T +++ F+ F + + + + GLH H++ E ++ G+ L Sbjct: 4 MIPTLKKEDWFHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVT 63 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNN 123 GD I H + ++N+ L F +R + Sbjct: 64 GDTFVIGGDRPH-DYLNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRH 122 Query: 124 AF--------------LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDD 169 F L YVE++ L R G + + ++ L + Sbjct: 123 QFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCYIRTRNPE 182 Query: 170 VPQWLKSTVEKMHDKEQF-SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + L+ H + F +L+++V +S S+ R + +P++ + ++RI Sbjct: 183 SKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQ 242 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A + L T+ S+TDIAF+ G+S + F + F+ +P+ YRK++ Sbjct: 243 EASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 27/287 (9%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISG--LHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A REQ F + Y + S H H+ +EF L G ++N R+ L+ G Sbjct: 27 AAGREQTQHGSPLFPIACYAEDLSCFSVAWHWHEEFEFILAALGPIHVDVNKTRLTLQTG 86 Query: 70 DFVFIPLGSHHQSFYEFGATRI--------LNVGISKRFFEQHYLPLL----PYCFVASQ 117 VFI G+ H G + L G+ F+++ PLL P F+ + Sbjct: 87 QGVFINSGALHAVEPAEGRALLHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFFLLDE 146 Query: 118 VYRTNNAFLTYVETVISSLNFRETGLEELVE---------MVTFYVINRLRHYREEQVID 168 L + + E V ++T V +++ +EQ+ Sbjct: 147 AVPWQRQVLLCLREAWKGVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQEQIAS 206 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + + + VE + E +E + A S+ R+ +++ G TP+Q + + R+ Sbjct: 207 ERMKQMLRYVE----EHYAEELTVEKLAGCVALSESACLRSFRQFLGITPIQYVKQFRVE 262 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 A + L T ++ E G+S S FIKTF+++ TP+ YR + Sbjct: 263 KAAELLRSTRLKTGEVGLECGFSDASYFIKTFREIKHCTPREYRIRF 309 >UniRef50_C6D149 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D149_PAESJ Length = 279 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 115/280 (41%), Gaps = 15/280 (5%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +N P + A NFH+ + LH HD+YE +V++G+ +NG L Sbjct: 1 MNVPMLYAAALIDPLVQSNFHIV--HSVRHAYPLHGHDFYEIFIVISGQCTHLVNGDTQL 58 Query: 66 LERGDFVFIPLGSHH-QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA 124 L G VFI H E G R LNV K E + + F + Sbjct: 59 LREGAMVFIRPDDTHSYDLLEGGDCRFLNVNFYKEVVEGAFDYIGHAAFAQALRSPQLPP 118 Query: 125 FLTYVETVISSLN--------FRETGLEELVEMVTFYVINRLRHYREEQVIDD---VPQW 173 F+ T + +L F T ++ M ++ + L H+ E D +PQW Sbjct: 119 FIMLPGTDMEALMRKSEQIQLFNSTDKQKARTMARSFLSDALTHFFLEFRNDGTQAMPQW 178 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + ++ KE FS + L + L+ +S +L R ++Y TP +N +R+ AK Sbjct: 179 FDHLLAQLQRKENFS-AGLPRLRELTDRSDGHLNRVFKQYLRMTPTAYLNHLRLGHAKNL 237 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L T + DIA+EAG+ + S F FK P R Sbjct: 238 LLTTQLPIVDIAYEAGFDNLSHFYHLFKDAYGIAPGKIRN 277 >UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDH7_9CLOT Length = 331 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 119/296 (40%), Gaps = 24/296 (8%) Query: 1 MMQPVINAPEIATAREQQLFNGK-----NFHVFIYNKTESISGLHQHDYYEFTLVLTGRY 55 M++ + T Q K + H K S LH HDY+E V +G Sbjct: 29 MLKKLARKNGFYTVPIQFYLTKKEQVAVDLHGLPNAKNAEQSLLHNHDYFELMYVRSGSC 88 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA 115 F +++ L +GD + + + H F + N+ +S+ FEQ LPLL + Sbjct: 89 FNVFESEKITLHQGDILLLNPNAKHDPFTTSEGDCLFNIMLSRELFEQSMLPLLSDNHLI 148 Query: 116 SQVY------------------RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINR 157 S + R A ++E +I +E G +++E + R Sbjct: 149 SNFFVDYMYHINKTQDYLYFPSRNTKAISPFLEEIILEYINKEQGYVQVIESALVILFAR 208 Query: 158 L-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK 216 L R + +E I+ ++ + ++ L ++ A S YL++ +++ G+ Sbjct: 209 LGRIFAQENHIESSVSNKLIVDVIVYLNQHSADVTLSSLAAEFGYSSGYLSKLIRKHTGQ 268 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + I++ ++ AK LE T +S +IA G+ S ++F+ TP S R Sbjct: 269 SFTDILSNFKLEKAKHLLETTAHSTDEIAQLTGFHDASYLSRSFRSKYGVTPSSCR 324 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 18/279 (6%) Query: 14 AREQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E+ F + +Y K + H HD +E + G ++GK L Sbjct: 7 LKEKVQHGSAVFPINVYEKIFVHENNTLLPHWHDEFEIVYLEKGTASFRVDGKEYFLGPK 66 Query: 70 DFVFIPLGSHHQSFYEFG-ATRILNVGIS------KRFFEQHYLPLLPYCFVASQVYRTN 122 F+F+ GS H E + +S + YL + + Q + Sbjct: 67 QFLFVNCGSIHGGKAEDNPEPYAIVFSLSMLFSEGPDICKSKYLQSVSERKLLVQNSFED 126 Query: 123 NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR------EEQVIDDVPQWLKS 176 + +I+ + G E LV+ F + L + R ++ +D + +KS Sbjct: 127 EHTRELISNIITVWKEKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKS 186 Query: 177 TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 ++ ++ S+ ++ + L+ S+ Y R + TP+ IN+ R+ A + ++ Sbjct: 187 ALDFINSNYS-SDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKN 245 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 TN S+++IAFE G+++ S FIK FK+ TP Y+K + Sbjct: 246 TNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKKNV 284 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 20/276 (7%) Query: 21 NGKNFHVFIYNKTESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 + KN H+ ++ + E+++ LH+H +YE V G N + ++ G+ + + Sbjct: 50 DAKNLHISLHPRPENVNPKMLLHKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPN 109 Query: 78 SHHQSFYEFGATRILNVGISKRFFEQHYLPLLPY----------CFVASQVYRTNNAFL- 126 + H + N+ + FF+ LL C S + R FL Sbjct: 110 TAHCPETLTDQDCVFNIMFRQNFFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLP 169 Query: 127 -----TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 +E +I +++ E + + + + L + + ++ + Sbjct: 170 GKASADTIERLIVECFEKQSCYETITQSLLVELFAYLARNSDNSFSYPKNNHERLILKII 229 Query: 182 -HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + +E +E L+ + S YL+R ++Y GK +I+ + R+ AK LE ++ S Sbjct: 230 TYIQESPAEITLQKVSEQFQYSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLS 289 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + DIA GY+ S F K FK+ TP YRK + Sbjct: 290 ILDIALILGYNDVSHFYKVFKQEIGCTPTEYRKHYS 325 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 21/260 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 H H+Y+E V G V L +GD + + H + E + N+ +SK Sbjct: 72 FHNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTEHPQDVVFNIMLSK 131 Query: 99 RFFEQHYLP-----LLPYCFVASQVYRTN-------------NAFLTYVETVISSLNFRE 140 F+ P L + F Y+ N + ++ ++ + Sbjct: 132 EIFQSDVFPCMTDNRLLFHFFLDYFYQLNKLDDSLTFPHSPKHPIEPLIKLMVEEFIEDD 191 Query: 141 TGLEELVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEK--MHDKEQFSESALENMVA 197 + +++ + L R YRE D L TV H ++ + +LE++ Sbjct: 192 LCYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIHLIYHMQQHLRQLSLESLAE 251 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S +++R + GK+ +++N +RI AK LE T+ + +IA G + S Sbjct: 252 AFHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEIADSIGVNDTSYLN 311 Query: 258 KTFKKLTSFTPKSYRKKLTE 277 K FKK TP YRK+ + Sbjct: 312 KIFKKKYGLTPLQYRKQFQQ 331 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%) Query: 39 LHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +H H Y+E V G N +R++L +GD + + + H + I N+ + Sbjct: 71 MHNHGYFELVYVYHGSCVNLFPNQERIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVLK 130 Query: 98 KRFFEQHYLPLLPYC-----FVASQVYRTNNA-------------FLTYVETVISSLNFR 139 + FE+ L LL F + +YR N A +E +I+ L + Sbjct: 131 PKLFEKSMLSLLSDNPLFSNFFVNYMYRVNKARDYMLFHTNGEKRIAQTMENIITELYSK 190 Query: 140 ETGLEELVEMVTFYVINRLRHYREEQV----IDDVPQWLKSTVEKMHDKEQFSESALENM 195 E E + L +EQ+ D+V + + D E FS++ L+++ Sbjct: 191 EMCYRRAAEAELIVLFTCLARIYKEQLGLKGFDEVKNKQVTDIITYMD-ENFSQATLQSV 249 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S YL+R +++ K +II+ ++ A LE T+ + +IA G++ S Sbjct: 250 ADHFGYSTHYLSRMIKKHTNKNFSEIIHSFKLENACTYLETTDIPMREIAELVGFNDASY 309 Query: 256 FIKTFKKLTSFTPKSYRKK 274 F K FK+ +P YRK+ Sbjct: 310 FHKVFKQKYGQSPAEYRKQ 328 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 5/247 (2%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATR 90 + S H H + E V G + +I GK++ +++ D + I H F + Sbjct: 29 DKDWHSMEHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQPWE 88 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMV 150 + +GI F Q+ PY + + R + Y+ T++ + ++ G + + + + Sbjct: 89 YIALGIEGVQF-QYSEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQNL 147 Query: 151 TFYVINRLRHYREEQVIDDVPQWLKST---VEKMHDKEQFSESALENMVALSAKSQEYLT 207 ++ + ++ + Q VE+ ++ + L+ + AL ++ YL Sbjct: 148 LELILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINKYYLV 207 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 A + Y G +P+ + + R+ A+ LE TNYSVT I +G+SS S F +TF++LT T Sbjct: 208 HAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLTGTT 267 Query: 268 PKSYRKK 274 P +YRKK Sbjct: 268 PNAYRKK 274 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 109/288 (37%), Gaps = 26/288 (9%) Query: 16 EQQLFNGKNFHVFIYNKTESISG------LHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E + FH+ Y+ + LH H EF +V G ++ +R +L G Sbjct: 52 EHRQHGDTTFHIRAYHVVLTPGPYQQTVNLHWHSEAEFIVVTRGSVCLQVGSERHVLADG 111 Query: 70 DFVFIPLGSHHQSFYE---FGATRILNVGI------SKRFFEQHYL-PLLPYCFVASQVY 119 D + G H + + G+ S +Q YL PL + Sbjct: 112 DVALLSGGELHSMAAPGKGPSECKAIVFGLDLLEGPSSDRVQQSYLSPLASGKLLLPGAI 171 Query: 120 RTNNAFLTYVE----TVISSLNFRETGLEELVEMVTFYVINRLR------HYREEQVIDD 169 ++ Y+ ++ +L + G E V+ + V+ +L + + +DD Sbjct: 172 AHDHPVRQYLAARLCEIVEALEEQPVGYELAVKGCLYDVLAQLFRAELLVEHSPRREMDD 231 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V D + L ++ ++ S+ + R + + PMQ +NE R+ Sbjct: 232 RRADTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVAR 291 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 A L+ N S+T I + G+ S FIK F+ TP +YRK L + Sbjct: 292 AADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKALLK 339 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 113/275 (41%), Gaps = 16/275 (5%) Query: 15 REQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E + +F + Y+ + S H H YE +++G + +NG + L+ GD Sbjct: 7 KENRQHGTFDFPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNELKLKTGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGIS-----KRFFEQHYLPLLPYCFVASQVYRTNN-A 124 FI G H + + + ++ V + + T+N Sbjct: 67 LAFIHAGILHGGTPIDCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNLE 126 Query: 125 FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK---- 180 T + S+ ++ G E + + ++++ + +R + + + + Sbjct: 127 LQTVCNYLFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNV 186 Query: 181 --MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + +++ LE++ + + +Y R + ++P+ +N RI + +QL TN Sbjct: 187 LSLIEQQYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTN 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 S+T+IA G++ S FIKTFKK TPK Y K Sbjct: 247 ESITEIALNCGFNDISYFIKTFKKYKGVTPKQYLK 281 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 99/285 (34%), Gaps = 22/285 (7%) Query: 13 TAREQQLFNGKNFHV----FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 + +E + + F + + + H H E V+ G +I+ + + + Sbjct: 8 SLKESTVHGNERFPFGAYWYQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQIDSEYIPVRA 67 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVG-ISKRFFEQHYLPLLPYCFVASQVYR------- 120 G+ +FI G H + L+ + R Sbjct: 68 GEAIFIDGGDLHTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERRAAFPRR 127 Query: 121 ----TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVI------NRLRHYREEQVIDDV 170 T+ L +++ ++ + G E ++ F ++ RL + + D Sbjct: 128 MTSGTDERLLEHIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRSEAADMT 187 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 V L + L S+ R + G+TP+ +N R+ A Sbjct: 188 RTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQA 247 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + L + ++DIA + G+ S F++ F+K+ + TP YRKKL Sbjct: 248 AELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 108/286 (37%), Gaps = 28/286 (9%) Query: 14 AREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 E+Q F + + Y E + H HD EF L G +++ + G+ VF Sbjct: 16 GNERQPFGT---YWYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGAGEAVF 72 Query: 74 IPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT----------- 121 I G H + + ++ + + + V R Sbjct: 73 IDGGDIHAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRET 132 Query: 122 --NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL--------RHYREEQVIDDVP 171 + + L ++ ++ S + G E V+ F ++ + R + + Sbjct: 133 AADLSLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKI 192 Query: 172 QWLKSTVEKMHDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 LK+ ++ H + +S L + AL S+ R + +TPM IN RI A Sbjct: 193 DRLKTVIQ--HIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQA 250 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + L ++DIA E G+ + S FI+ F+K + +P +RK+L Sbjct: 251 AELLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQ 296 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 117/274 (42%), Gaps = 26/274 (9%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 N H+ +N++ H+HD++E V+ G ++G+R+LLE+GDF + + HQ Sbjct: 91 NAHIPFFNRS---PQPHKHDFFELVYVVRGSMKNVVDGRRILLEQGDFCLMNPNAVHQVE 147 Query: 84 YEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNNA-------------- 124 + +N + K F + +L + L F +Y N Sbjct: 148 TDGKDPLAINFLMKKELFNKAFLSIVLENELFANFFVDSIYHKKNKQNYLVFSARHLEEP 207 Query: 125 -FLTYVETVISSLNFRETGLEELVE-MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM- 181 Y+ + + + ++E ++ + R Y+ E + + + K+ Sbjct: 208 IISQYLLQIFREYENDQLYSQRVIESAMSCLFVEFTRSYKRELEFESLQDLPGGNISKII 267 Query: 182 -HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + E + + L+ +YL ++Y G++ +I+ + R+ A + L+ T Sbjct: 268 SYLSENYRTATLQTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQFRLAHACELLKQTELP 327 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 ++D+A E+GY++ + F K F++ +P YR + Sbjct: 328 ISDVAQESGYTNRTYFYKVFQQKFGMSPNDYRHQ 361 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 112/273 (41%), Gaps = 20/273 (7%) Query: 20 FNGKNFHVFIYNK----TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 +F +F++ + H H+ +E + G ++G L G+++F+ Sbjct: 15 HGTPDFPLFVHEDIFVYRNGVVNPHWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVN 74 Query: 76 LGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPLLPYCFVASQVYRTNNAFL 126 GS H + + R +++LPL+ + + Sbjct: 75 SGSIHSGLEMIKRSIGYAIVFDLRLLYSEEPDYCKHEYFLPLINKRYHIPSNL-NDEHIR 133 Query: 127 TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDD-----VPQWLKSTVEKM 181 + +I + G E ++ + F + R+ Y E+ D + +K + + Sbjct: 134 NDICRIIEVFKEKSYGYELYIKSLLFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYI 193 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + +L+ + S+ YL R + +P++ IN++R++ A + L T+ SV Sbjct: 194 NQNYN-KNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSV 252 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 ++IAFE G+ + S FIK FKK TP +RK+ Sbjct: 253 SEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQ 285 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 116/278 (41%), Gaps = 16/278 (5%) Query: 15 REQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E + +F + Y+ T + S H H E +L G + I+ +++L ++ D Sbjct: 7 KENKQHGTFDFPIEFYHVTPNHSRYNMPYHWHTECEIIRILEGEFILFIDKEKILAKKND 66 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQH------YLPLLPYCFVASQVYRTNNA 124 +F+ G H + + + + Y + +A ++ A Sbjct: 67 IIFVHSGIFHGGLPNDCIYECIVFDMKLLLKDNNACTKQIYDIVNHNKVIAHKLPSNVQA 126 Query: 125 FLTYVETVISSLNFRETGLEELVEMVTFYVI-----NRLRHYREEQVIDDVPQWLK-STV 178 ++ ++ + TG E + + +Y+I N+L + ++L+ V Sbjct: 127 LNNCCTSLFEAMRVKSTGYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQLKNV 186 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + E + LE++ S S +Y R KTP++ +N RI + ++L T Sbjct: 187 ITLIENEYQNPLTLEDLSKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKLLATE 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 S+T+IA G++ S FIKTFKK TPK Y K L Sbjct: 247 LSITEIALNCGFNDVSYFIKTFKKHKGVTPKQYLKSLK 284 >UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDW5_9CLOT Length = 326 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 19/265 (7%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 N+ + LH H Y+E V G+ + + L GD + + H+ + E Sbjct: 58 YENEQKKYLRLHTHTYFEMIYVYHGKAYNNFADSSMTLHTGDILILNPNIPHRLYIESPE 117 Query: 89 TRILNVGISKRFFEQHYLPLLP-----YCFVASQVYRTNNA-------------FLTYVE 130 + N+ ISK FE+ +L L+ F S +Y N A ++ Sbjct: 118 DIVFNIMISKDLFEKSFLLLISENDLFSNFFISYLYHMNQASDSILFRHNPESGITAVLD 177 Query: 131 TVISSLNFRETGLEELVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSE 189 +I + G E+ +E RL R Y ++ ++++ + K + +E F+E Sbjct: 178 MMIEEFFNKPMGYEKALESFLALTFTRLTRSYSHQENLEELKKQQKIMPIIAYIRENFAE 237 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 + L + S++YL+R ++ GK+ +I ++ +A++ L + +++IA G Sbjct: 238 ATLVSTAQQFNYSEKYLSRLIKQRTGKSFNEISIGYKLEYARELLLNSVLPISEIAQRVG 297 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKK 274 Y++ S F K FKK TP +RK Sbjct: 298 YANVSYFFKAFKKRYMQTPYQFRKS 322 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 109/270 (40%), Gaps = 18/270 (6%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 +N +Y + H H + E G ++NG+ + GDFV I H Sbjct: 12 RNLPFSVYIAQDEKFSWHCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVIIHTMEDHTL 71 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQV-----------YRTNNAFLTYVET 131 ++L V + + + P ++ + + + + Sbjct: 72 I-RNSDCKLLGVQMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRRIRVPKGSLLESILSE 130 Query: 132 VISSLNFRETGLEELVEMVTFYVINRLRHYR-----EEQVIDDVPQWLKSTVEKMHDKEQ 186 ++ ++ G E ++ + + L + E V + +K ++ M ++ Sbjct: 131 ILVEYQKKQPGYEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDYM-EQHI 189 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 +E ++ ++ S + R ++ GKT ++ N IRI A+K L T+ ++T+IAF Sbjct: 190 ETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTITNIAF 249 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 E G+ S + F + FKK T P +YRKK+ Sbjct: 250 ETGFGSVAYFNRVFKKETGQAPANYRKKMR 279 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 103/272 (37%), Gaps = 15/272 (5%) Query: 18 QLFNGKNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 +F +F +FI + E H HD+ E + V G + + + + ++RGD IP+ Sbjct: 11 DIFFNPDFDIFINREVEGFCLSQHTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPI 70 Query: 77 GSHH--QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY------------RTN 122 G+ H + + I N EQ + + S +Y Sbjct: 71 GTSHVFRPSSQDNQLVIYNCIFRTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKF 130 Query: 123 NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMH 182 + FL+ + + + E L+ V+ L+ Y + + P + Sbjct: 131 DKFLSIMHGMFREYLKKGPRYEFLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQYI 190 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + + ++ + S S + R ++ G T MQ + IR+ + L+ T S+ Sbjct: 191 NDHFATNLTVQQVAERSFMSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQ 250 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + A + GY F F+K T TP+ YR+ Sbjct: 251 EAANQVGYQDMKFFHSLFRKKTGVTPREYRRS 282 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 105/284 (36%), Gaps = 20/284 (7%) Query: 12 ATAREQQLFNGKNFHVFIY--NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A RE F + Y N H H+ +E+ L + G ++N RV L+ Sbjct: 48 AEGREMVQHGSALFPIACYAENLKSYSVAWHWHEEFEYILAMKGPLTVDVNKTRVTLQTN 107 Query: 70 DFVFIPLGSHHQSFYEFGATRILN---------VGISKRFFEQHYLPLL----PYCFVAS 116 VF+ G H +L+ G+ F+++ P+L P F+ Sbjct: 108 QGVFLNSGILHAVEQAEKGEALLHSGVFHPRLVGGMDTIFWQKLIRPMLQPDAPAFFLLD 167 Query: 117 QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY-----REEQVIDDVP 171 + L + ++ E V + L + + + Sbjct: 168 EAVPWQAQVLACLREAWQAVAVEPFDYENRVRYYLSAALRLLSTQCVGGKTKVSQQEQIA 227 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + + ++ E +E + A A S+ R+ ++ G TP+Q + + R+ A Sbjct: 228 AERMKQMLRFVEEHYAEELTVERIAASVALSESACLRSFRQMLGITPIQYVKQFRVEKAA 287 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + L T +I E G++ S FIKTF+++ TPK YR K Sbjct: 288 ELLRSTRLKTGEIGMECGFADGSYFIKTFREIKHCTPKEYRAKF 331 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 118/283 (41%), Gaps = 27/283 (9%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 E+ N H+ I H+HD++E V G ++ V+L++GD + Sbjct: 56 FERDQLISANMHLNI----PMALAPHKHDFFELIYVYQGSVINVVDAHEVVLQQGDLCIM 111 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVYR--------- 120 + H + N+ I F Q +L L+ F + +Y+ Sbjct: 112 NASAVHTLGKLGKQDTVYNILIKPELFNQAFLGLIAENEIISSFFLNSIYQKSISRNFMT 171 Query: 121 ------TNNAFLTYVETVISSLNFRETGLEELVEM-VTFYVINRLRHYREEQVIDDVPQW 173 ++ TYV +I +F++ + +E+ + I R Y+ Q + + Sbjct: 172 FHTQDFPSDDAETYVHRLIMENHFKDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSIEL 231 Query: 174 LKSTVEKM--HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 S V ++ + + + + +++ + + YL+ ++Y KT +I+ IR AK Sbjct: 232 GMSNVSQIIAYISDHYKDISIKQVADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTAAK 291 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + L+ + + +I + GY++ S F +TFK+ TP YRK+ Sbjct: 292 EYLQKLDIPINEIVYMVGYTNKSHFYRTFKQEMGITPAQYRKQ 334 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 176 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 107/294 (36%), Gaps = 32/294 (10%) Query: 14 AREQQLFNGKNFHVFIYNKTESISG-----------LHQHDYYEFTLVLTGRYFQEINGK 62 A+ F F V + G H HD+ E +V GR + G+ Sbjct: 5 AKGVDYFGADGFPVTVRRVATQADGGESHPHDVTEIEHWHDFCELAMVTGGRGVHVLEGE 64 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQ 117 + GD + H F E ++NV L F+ Sbjct: 65 SFHVSTGDVFVLQGRQVHC-FRERQGLALINVMYDPERLPLPLGLLRRLPGYSALFMLEP 123 Query: 118 VYRTNNAFLTYV----------ETVISSLNFRETGLEELVEMVTFYVINRL-----RHYR 162 +R+ + F + + E ++ + +E E V ++ L RHY Sbjct: 124 TFRSTHRFSSRLRLARRELGSAEAIVERIENESKAAQEGHEAVLLSLLVELMVLLSRHYA 183 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + + + M ++ LE + + S+ L R ++ G++P+ + Sbjct: 184 QSDTRESHALLQVGQLVSMLEQRFGEPWTLEQLAEQARVSRSNLLRMFRQATGQSPIDFL 243 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +RI A++ L ++ +T+IA E G+S + F + F+K TP YR+++ Sbjct: 244 IGLRIEAARRLLRRSDLGMTEIALECGFSDGNFFPRQFRKTCGVTPSIYRRQMR 297 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 99/243 (40%), Gaps = 17/243 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD+ E V G + GK+ L GD V + G+ H+ + A L + Sbjct: 38 HSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIRD 97 Query: 100 FFEQHYLPLLPYCFVASQVYR----------TNNAFLTYVETVISSLNFRETGLEELVEM 149 F +P LP ++ + YR + ++ S + F + + LV Sbjct: 98 F----AVPGLPAGCLSQEKYRVLSCGEYRYKMDIYLRELLQETSSQIEFYQEISQGLVSA 153 Query: 150 VTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 + V+ +R E++ +++ D+ S L+++ S+ YL+ Sbjct: 154 LLVLVMRLIRINPEDEA---ALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLSHL 210 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 + G +P++ + R+ A + L T V++++ GY +P F + FK++ +P Sbjct: 211 FKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPV 270 Query: 270 SYR 272 YR Sbjct: 271 KYR 273 >UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDM6_9FIRM Length = 298 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 100/283 (35%), Gaps = 22/283 (7%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 A +E + F YN + + H H+ YE + V G L GD Sbjct: 12 ANGQELKQHGTGLFPCGCYNASPEVQVPWHWHEEYECSYVFHGAVTYHTPQGEFRLGEGD 71 Query: 71 FVFIPLGSHHQSFYEFGAT----------RILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 +F+ G+ H + R++ ++++ PL + + R Sbjct: 72 GIFLNSGTLHTVEVAPAGSLKKSDLVFHGRLIYGSRDSVLYQKYVQPLSAPDAFQTLILR 131 Query: 121 ----TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE------EQVIDDV 170 + L+ ++ + G E V + + L YR Sbjct: 132 RTVSWHAEILSRIKKAVRLCQNEPEGYEFTVRSLLSEIFFDLYCYRNAPAAETSAATASE 191 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 +K + + + + + A + + R Q+ +P+Q + RI + Sbjct: 192 NARIKQMLRYLQENYT-RRVTVAELAAHANICERECLRCFQKVLHLSPIQYLIRYRIARS 250 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L ++ SV +I+ G+ SPS F KTF+++T TP YR+ Sbjct: 251 CILLRESDLSVLEISNLCGFESPSYFTKTFRQITGGTPTQYRR 293 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 13/251 (5%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILN 93 ++ H H +YEF + +G IN +E GD +F+ G H++ Y + Sbjct: 15 HMAESHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPVNERVT 74 Query: 94 VGISKRFFEQHYL----PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLE----E 145 + + + + Y F S+V N + VE +I + + ETG + Sbjct: 75 ISFDGEYLDSMKELCGEENVEYIFRNSKV-TVPNGNRSRVEELIRRIEYEETGQDGFSPL 133 Query: 146 LVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE---KMHDKEQFSESALENMVALSAKS 202 + + + ++ L +E + + + T+E K + LE + LS S Sbjct: 134 MKKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLEEVAELSHMS 193 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 Y +R + G + + IRI A + L + SVT+IA G+ + F F+K Sbjct: 194 PAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAFRK 253 Query: 263 LTSFTPKSYRK 273 +P+++RK Sbjct: 254 AKGVSPRAFRK 264 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 115/292 (39%), Gaps = 21/292 (7%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 P AR Q ++ + H HDY+E V +G F G+ + L Sbjct: 53 TVPFKGIARSQDQDIAILYYGLPLGQPPKQYVWHNHDYFEIIYVHSGSCFNRFQGETIKL 112 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVYR- 120 +GD + + HQ + I N+ +SK FE LL F + Y+ Sbjct: 113 CKGDILLLNPTILHQIYALHEEDHIFNIMLSKSLFEGSMWQLLSGNKIINNFFVNYFYQM 172 Query: 121 ------------TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL-RHYREEQVI 167 N+ + ++I+ ++ ++++ + L R Y E+ I Sbjct: 173 NKTKDYVHFRCSQNHLIEETITSLIAEYLGKKPAYYQVIQSYLIILFAYLSRIYSEQHFI 232 Query: 168 DDVPQWLKSTVEKMH--DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 + + + + + L + + S Y +R + + GKT +I+++ Sbjct: 233 EQQDLEKIGILPDIISFIAQNYQSVTLTEIQNVFNYSSGYTSRLIKHHTGKTFSEIVHDF 292 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 ++N AK+ L TN ++TDIA + G++ K FKK TP YR+ + + Sbjct: 293 KLNHAKELLVSTNLNITDIAEKIGFNDSHYLNKVFKKRFGITPTQYRRGMKK 344 >UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3J7_9BACL Length = 281 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 11/258 (4%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ-SFY 84 H F E S +H HD+YE LV G+ +NG+ V + G VFI H Sbjct: 22 HFFTVPSLEYASPIHCHDFYELFLVTQGQALHIVNGEAVPITEGTLVFIRPQDIHCYEKL 81 Query: 85 EFGATRILNVGISKR-------FFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN 137 + +N+ ++ F P V V + + + +N Sbjct: 82 QEHDCEFINLCYTREVIHEVFAFLGSSITPENLLSSVLPPVTLLSTGEKERLTDRLERIN 141 Query: 138 FRETGLE--ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENM 195 + L+ L+ V ++ + ++ P WL+S + +M KE FSE ++ M Sbjct: 142 LVQDQLQVAGLLRAVLVELLIQYFWKYQQTDTKAYPLWLESLLLQMQRKENFSE-GVQRM 200 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 LS +S ++ R + TP++ IN +R+++AK L T ++TDIA AG+++ S Sbjct: 201 YELSERSPGHINRVFRSLLHTTPVEYINRLRLDYAKHMLVTTRLNITDIALSAGFNNLSH 260 Query: 256 FIKTFKKLTSFTPKSYRK 273 + FKK TP ++R Sbjct: 261 YYHLFKKEFGITPLAFRN 278 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 13/268 (4%) Query: 20 FNGKNFHVF-IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 FN + +V Y I H HD+ E +++ G+ +I G+RV LE+GD + G Sbjct: 9 FNPQILYVANCYTNEVRIGDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGV 68 Query: 79 HHQSFYEFGATRI-LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN 137 H E G T L++G E + P+ + ++A L+ + +I + Sbjct: 69 KHYDITEPGMTNAQLHIGFRNFTLEGYSRNTFPFKKAFLRKKEEDSAILSISKQIIEEKD 128 Query: 138 FRETGLEELVEM-VTFYVINRLRHYREEQVIDD---------VPQWLKSTVEKMHDKEQF 187 + G + +++ V +I+ LR EQ+ ++ Q L + + +K Sbjct: 129 AEKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEKHHT 188 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + +L + S Y+++ + G++P+ + +IR++ A++ L+ N +V A Sbjct: 189 EDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQAANM 248 Query: 248 AGYSSPSLFIKTFKKLTSFTPKS-YRKK 274 GY+ F K FKK F P +RK Sbjct: 249 VGYNDAYYFSKLFKKYYGFPPSENWRKS 276 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 8/249 (3%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRI 91 +++S H HDY+E + G F I + + G+F+ H S+ E + Sbjct: 17 NDNMSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKR 76 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETG----LEELV 147 L V SK + + LL + VY+ + V ++ L + E+ + Sbjct: 77 LLVYFSKEEVDS--VQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYI 134 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 + + + + V + + + +H Q + +++ + +S S YL Sbjct: 135 HTLLNMALLTIARNIQTPVKPEKRNRITDVISYIHQNYQ-EDISIDQLAQMSYVSPYYLC 193 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R +RY T +Q +N R+ A++ TN ++T+I+ + G+S+ + F + FK + T Sbjct: 194 REFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMT 253 Query: 268 PKSYRKKLT 276 P ++RK Sbjct: 254 PSNFRKMYK 262 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 99/249 (39%), Gaps = 11/249 (4%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNV 94 + H H YYE +L+G+ IN LE GD IP H++ YE + Sbjct: 32 MKRPHYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGI 91 Query: 95 GISKRFFEQ--HYLPLLPYCFVASQVYRT-NNAFLTYVETVISSLNFRETGLEELVEMVT 151 S+ + + SQ RT + F +E +++ + E + ++ Sbjct: 92 YFSRDTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQL 151 Query: 152 FYVINRL-------RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 +++++ + R E + + + ++ L + A + S Sbjct: 152 CSLLHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPT 211 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y ++ + G + +N IR+ A L T+ SVT +A G+S + F F++LT Sbjct: 212 YFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLT 271 Query: 265 SFTPKSYRK 273 +P+ YRK Sbjct: 272 GVSPREYRK 280 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 106/284 (37%), Gaps = 21/284 (7%) Query: 9 PEIATAREQQLFNGKNFHVFIYN---KTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRV 64 E+ + +E + F IY + S LH H E V G + Sbjct: 86 KELESFQETKKHGSTMFPFNIYPCTIPGDFPSVALHWHKSMEIIFVKKGTGRIQTGRNMQ 145 Query: 65 LLERGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFF---------EQHYLPLLPYCFV 114 GD +P G+ H + G N+ F +++ +PL + Sbjct: 146 EARSGDIFVMPPGTLHAIYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQLL 205 Query: 115 ASQVYRT----NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV 170 V+ + + RE G E V+ ++ L E D Sbjct: 206 QPAVFSPVDAGYKQISACLRRAEELCSARERGYELGVKAALLELLLYLLRMCPEAPERDT 265 Query: 171 P--QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 P + LK ++++ +++ + +M A+ S + R +R G +P+ +NE R+ Sbjct: 266 PDMERLKRVLQRI-EQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLA 324 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A + L T+ + IA AG+ + S F + FKK TP++YR Sbjct: 325 AAAENLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 2/243 (0%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGI-S 97 H H E L+G + G+ ++ D V + H + +G+ S Sbjct: 37 HTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVAS 96 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINR 157 F R + SL+ ET ++L+E++ +++ Sbjct: 97 MEFLFSKADTNYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVRC 156 Query: 158 LRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKT 217 + + + +++ D + +L+ + L+ ++ YL QR YG + Sbjct: 157 TTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDLLAELAHLNKYYLAHTFQREYGIS 216 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 P+ +N RI +K L T YS+ I+ G+SSPS F + F+K TP YR++ + Sbjct: 217 PITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTPNEYRRQTRQ 276 Query: 278 FNQ 280 + Sbjct: 277 GKR 279 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 6/253 (2%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATR 90 + + S LH H + E V G +I ++ DFV I + H + Sbjct: 30 EGDWHSQLHSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIINPNTMHTEVSRDRNPLE 89 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMV 150 + + I FE L Y Y+ N L Y+ ++ + +++ + + Sbjct: 90 YIVIAIDGISFEIPEDSLKDYISCNYANYK--NEILFYLNLMVKESQAKNELYDDMCQQL 147 Query: 151 T-FYVINRLRHYREEQVIDDVPQWLKS--TVEKMHDKEQFSESALENMVALSAKSQEYLT 207 +IN LR R + K ++ D+ E L+ + + ++ YL Sbjct: 148 MQVLLINILRLNRINVSLTQGKTIRKEIFMIKNYIDRNYHKEITLDTLAEKTHMNKFYLA 207 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 + G +P+ + + RI +K L T+ S++ I+ G+SS S F + FKK T+F+ Sbjct: 208 HEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGFSSLSYFAQAFKKSTNFS 267 Query: 268 PKSYRKKLTEFNQ 280 P YRK ++N+ Sbjct: 268 PLQYRKNHQKYNK 280 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 102/246 (41%), Gaps = 2/246 (0%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 ++++ H H+Y+E + +G+ + + L G+F+ P H S+ + G + + Sbjct: 16 NDNMAKSHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKR 75 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVT 151 L + +K + + N + ++ F + EE + + Sbjct: 76 LVLYFTKEMIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEEALYFIL 135 Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 ++ L E + + S + +H+ + L + S YL R + Sbjct: 136 NQILILLLRNSTETAKPEKQSRITSIIHYLHENYTY-PITLNELAEQFYLSPYYLCREFK 194 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 +Y T +Q IN +R+ A++ T+ SVT+I+ G+S+ + F + ++ +T +P Sbjct: 195 KYTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKS 254 Query: 272 RKKLTE 277 RK+ E Sbjct: 255 RKQAKE 260 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 10/264 (3%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 +H + + H H YE +L G + + G LL++ D FI G H Sbjct: 20 EYHYVDHTHPQYEMPFHWHIEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKLHGGS 79 Query: 84 YEFGATRILNVGIS----KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFR 139 + + + + F +L + + ++ + + T+ ++ Sbjct: 80 PKDCTYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFDAIRSE 139 Query: 140 ETGLEELVE---MVTFYVINRLRHYREEQVIDDVPQWLKSTVE---KMHDKEQFSESALE 193 E G E + ++ F + + +Y +E+ D Q ++ ++ + L+ Sbjct: 140 EEGYELSILGSLLLFFAALQKNEYYSKEEEYDLKSQKAIEQLKASLELIVTDYAKPLTLQ 199 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + S +Y R Q Y +TP+ +N RI A Q+ + ++TDIAF G++ Sbjct: 200 ELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRCGFNDF 259 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTE 277 S FIKTFKK TPK Y+ E Sbjct: 260 SYFIKTFKKYKGITPKKYQMMWKE 283 >UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIX6_9CLOT Length = 330 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 105/270 (38%), Gaps = 21/270 (7%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF 86 V ++ LH HD++E V G + L GD + + + H F Sbjct: 58 VSLHRGNHRDRYLHNHDFFELLYVYKGSCVNMTREGEMPLNEGDLLLLNPNALHAPFAPG 117 Query: 87 GATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTN-------------NAFLTY 128 ++N+ + FE L L+ F + +Y N + Sbjct: 118 EENIVVNIIVRPSVFENVMLSLIADNKLFSNFFVNYLYHINMTTSYLYFPKDEEHPIKFI 177 Query: 129 VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV---EKMHDKE 185 ++ +I+ + +++ + + L + ++ + KS + H + Sbjct: 178 MDMLIAEYLSHDICYTNVMQAILVQLFAALARSYRKMNKVEIEDFEKSQLVVDIISHINQ 237 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + L+ + S Y+++ Y GK +I++ +R++ AKK LE + ++T+I Sbjct: 238 NIATVTLKELSERFQYSSSYISKLINSYTGKNFSEIVHFLRLDRAKKYLENKDLTITEIT 297 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 G+S + F K FK + +P YRK++ Sbjct: 298 QAVGFSDSNYFYKVFKNRFNLSPSEYRKQV 327 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 103/258 (39%), Gaps = 16/258 (6%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR-ILN 93 S+S H HD+YE +L+G I + + GD VF+ + H++ L Sbjct: 28 SMSADHLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHKTLDSGRPDHDRLV 87 Query: 94 VGISKRFFEQHYLP------LLPYCFVASQVYRTNNAFLTYVETVI----SSLNFRETGL 143 + I+ F +P L + R + VE ++ + + + G Sbjct: 88 LYINPELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVERMVGDMVNEMIHPQAGS 147 Query: 144 EELVEMVTFYVINRLRHYRE-----EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVAL 198 L+ T ++ R + V V + + L + Sbjct: 148 SWLLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRYLNDNYRQALTLPEVAEA 207 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S YL+R ++ G T +N +R+ A++ L ++ S+TDIA+ +G+S+ S F K Sbjct: 208 FRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIAWRSGFSNFSHFGK 267 Query: 259 TFKKLTSFTPKSYRKKLT 276 FK+ +P++YR++ Sbjct: 268 MFKRTVQLSPRAYRQQYR 285 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 173 bits (438), Expect = 7e-42, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 7/264 (2%) Query: 19 LFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 + G + +E++ H H YYE + G ++ + E G+ + P S Sbjct: 9 IEQGADIAAERVRSSENMMKSHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYS 68 Query: 79 HHQSF--YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSL 136 H S+ E A + + V +++ L L+ A +Y + + ++ + Sbjct: 69 MHHSYAPSEDQAFQRIVVYFTEKAIGD--LTLIEKMRHAGGLYHPDRRMSHQIHGLLGMM 126 Query: 137 NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK---MHDKEQFSESALE 193 ++ ++L ++ ++ + + V P KS V K + L+ Sbjct: 127 LMEQSETDDLHDITMETILRAILLLLLKDVRTLNPTVNKSRVIKVIEYISDHYMEDLRLD 186 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + SQ YL R ++Y +T Q IN RI A++++ TN+ + +A G++S Sbjct: 187 ELAGRFYVSQYYLCREFKKYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASS 246 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTE 277 + F + F+ +T TP ++RK ++ Sbjct: 247 THFSRVFRSVTGMTPTAFRKSCSQ 270 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 96/281 (34%), Gaps = 18/281 (6%) Query: 12 ATAREQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 A+ +E + F +Y T LH H+ E V G ++ Sbjct: 5 ASLQETKQHGAVRFPFNLYPCTIPGDFQQVALHWHESMELVFVKQGMGLVQVGVVTYPAY 64 Query: 68 RGDFVFIPLGSHHQSFYEFGA-TRILNVGISKRFF--------EQHYLPLLPYCFVASQV 118 RGD G+ H G N+ E++ LPL Sbjct: 65 RGDIFIFAPGTLHALRQAEGQRMEYENIIFEPELLGGAEDLCAEKYLLPLQSGRLSLPVR 124 Query: 119 YRTNNAFLTYVETVISSLN----FRETGLEELVE-MVTFYVINRLRHYREEQVIDDVPQW 173 N+ + L + G E LV+ + ++ + R+ + Sbjct: 125 LTPNDLCYLQAAACLRELEDANRAKRPGYELLVKGALLRFLALLIAQGRQCLSTETADTQ 184 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 TV + + + + + S + R ++ G++ + +NE R+N A + Sbjct: 185 RLKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAAEA 244 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L T+ +V IA G+ + S F + FK TP+ YRKK Sbjct: 245 LRTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 94/252 (37%), Gaps = 17/252 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISK 98 H H +EF L+L G+ +NGK L+ G +FI H + G + + Sbjct: 41 HWHTDWEFILLLNGKMSYSVNGKSYELQEGQAIFINSEQMHYGYSADGSDCNFICILFPP 100 Query: 99 RFF-------EQHYLPLLPY----CFVASQVYRTNNAFLTYVETVISSLNFRETGLE--- 144 E + LP+ F+ + ++ V N + G E Sbjct: 101 SLISSITRIKETYILPVCEDTSNPFFILHPEITWQRNLIELLKNVYELCNEEKDGFELHV 160 Query: 145 -ELVEMVTFYVINRLRHYRE-EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 L + F + N ++ ++ DD + K L + A Sbjct: 161 MSLFNTICFSLYNNIKDSISIQETADDKKLEAMHNMTGYIQKNYQKRITLNEIAAAGNVC 220 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + + KTP+ + E R+ + + L++++ SVT+IA + G++ S F + F K Sbjct: 221 RSSCCDIFKLILNKTPVSYLTEYRLEKSIELLKISSLSVTEIALQCGFTGSSYFTEIFHK 280 Query: 263 LTSFTPKSYRKK 274 TP YR+K Sbjct: 281 TLGCTPSQYRRK 292 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 172 bits (437), Expect = 8e-42, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 98/265 (36%), Gaps = 12/265 (4%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 FH + + H H YE +L G ++ K + D +F+ G H Sbjct: 18 PFEFHHIDHTHPRYVMSYHWHVEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVHSGILHS 77 Query: 82 SFYEFGATRILNVGISKRFFEQHYLP------LLPYCFVASQVYRTNNAFLTYVETVISS 135 + + ++ L + + L + + + Sbjct: 78 GIPHDCVYQCIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSDEHPQILNCISVLFDA 137 Query: 136 LNFRETGLEELVEMVTFYVINRL--RHYREEQVIDDVPQWLK----STVEKMHDKEQFSE 189 + ++TG E V ++ + HY E + + V + +K + Sbjct: 138 MYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVLEFIEKNYANP 197 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 L+ + A + S +Y R +TP+ +N RI A QL T+ S+T+IA+ G Sbjct: 198 ITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEIAYRNG 257 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKK 274 ++ S FI+TFKK TP Y+++ Sbjct: 258 FNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 16/276 (5%) Query: 15 REQQLFNGKNFHVFIYNKTESISG----LHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 RE++ + F Y TE+ H H+ E V +G + ++G ++ G Sbjct: 7 REKREHGTREFPYACYRVTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDAGC 66 Query: 71 FVFIPLGSHHQSFYEFGA-TRILNVGI-----SKRFFEQHYLPLLPYCFVASQVYRTNNA 124 I GS H + L + S + H P++ + + ++ Sbjct: 67 CSLIIGGSMHGGTPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSE 126 Query: 125 FLTYVETVISSLNFRETGLEELVE----MVTFYVINRLRHYREEQVIDDVPQWLKS--TV 178 + VI ++ +E G E V + +++ R HY+ + + ++ V Sbjct: 127 PAKDAKAVIDAMLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNV 186 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 ++ LE + ++ Y RA + Y GKTP++ +N RI A + + T+ Sbjct: 187 ISYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTD 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + DIA + G++ S FIK FK + TP+ Y ++ Sbjct: 247 EKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRR 282 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 20/256 (7%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ--SFYEFGATRILNVG 95 LH H+++E V +G I G+ + GD +F+ G H S + + Sbjct: 32 PLHWHEHFELIYVESGEVLYTIGGQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYALV 91 Query: 96 ISKRFF---EQHYLPLLPY-----CFVASQVYRTNNAFLTYVETVIS---SLNFRETGLE 144 + E H + L+ +AS++ +T++ + +T + + G E Sbjct: 92 FNPSILGLKEPHIVDLVAPYTNGMSMIASRIEQTDSLYPLLKQTTLRLAGEFEQKPRGYE 151 Query: 145 ELVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHD------KEQFSESALENMVA 197 V + L R + Q D ++ + + + +E + Sbjct: 152 LAVRSYCQLLFTWLSREFTVMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTVEQAAS 211 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S + R ++ G+T +Q +N RIN A+ L+ T SVTDIA E G SS + F Sbjct: 212 FVHMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSINSFS 271 Query: 258 KTFKKLTSFTPKSYRK 273 K F++L +P+ RK Sbjct: 272 KLFRQLRGVSPRDLRK 287 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 2/243 (0%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVG 95 S +H H E L+G ++G+ ++ D V + H + +G Sbjct: 65 STVHTHSCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLG 124 Query: 96 ISKRFFEQHYLPLLPYCF-VASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYV 154 +S F R + SL+ ET ++L+E++ ++ Sbjct: 125 VSGIEILFGKADSTYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWL 184 Query: 155 INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYY 214 + + + +++ D E +L+ + ++ ++ YL Q+ Y Sbjct: 185 VRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDTLAEVAHINKYYLAHTFQKAY 244 Query: 215 GKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 G +P+ +N RI +K L T YS+ I+ G+SSPS F + F+K TP YR++ Sbjct: 245 GISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGLTPNEYRRQ 304 Query: 275 LTE 277 + + Sbjct: 305 VRQ 307 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 107/294 (36%), Gaps = 20/294 (6%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNK--TESISGLHQHDYYEFTLVLTGRYFQE 58 M N ++ E Q F + Y + + H H+ +E V++G Sbjct: 1 MSIAKCNVTVNSSGEEVQKHGTSEFPIAFYEENLSSYSIPWHWHEDFEIIWVISGSIKVS 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL---------NVGISKRFFEQHYLPLL 109 +N +L + +FI G H +L I +++ + P++ Sbjct: 61 VNSTEHILNKNQGIFINAGFLHSIHATNDGEYVLRSIVFHPRLIGSIDSIYWQNYIEPII 120 Query: 110 PY----CFVASQVYRTNNAFLTYVETVISSLNFRETGLE-----ELVEMVTFYVINRLRH 160 + + L Y +V + L E G E EL +++ + N Sbjct: 121 QNKNLPYILLDPFINWQDKILAYSISVWNRLYNTENGFEIYVRNELSQLILIVLTNHSIC 180 Query: 161 YREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + + + T+ + + + ++ S+ + R R TP Q Sbjct: 181 EAKPSIRNLRNADRIKTMLQYIQMHFSETITISTLARVALISESEVLRCFHRTIHSTPNQ 240 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + + RI A + L T+ + DIAF+ G+ S S F KTF++ TP YRK+ Sbjct: 241 YLKQYRIQKACQMLIDTDMTSIDIAFQCGFQSSSYFTKTFREQIGCTPLEYRKR 294 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 17/257 (6%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT---RI 91 S+ G H HD +E +++G I + + GD V IP+ H++ + Sbjct: 26 SMDGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHER 85 Query: 92 LNVGISKRFFEQHYL---PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRET----GLE 144 + V L F V R + V+ +++ + + G E Sbjct: 86 ILVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGGYE 145 Query: 145 ELVEMVTFYVINRLRHYREEQVIDD-------VPQWLKSTVEKMHDKEQFSESALENMVA 197 E +++ ++ L + D P + V + + +L ++ Sbjct: 146 EYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDLAN 205 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S YL+ R G T + IN +RI A L T VT+IA+ GY S + F Sbjct: 206 RFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTHFG 265 Query: 258 KTFKKLTSFTPKSYRKK 274 + FKK + +P+SYR++ Sbjct: 266 RVFKKAKAVSPQSYRRE 282 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 60/286 (20%), Positives = 106/286 (37%), Gaps = 26/286 (9%) Query: 16 EQQLFNGKNFHVFIYNKTESISG------LHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E + FH+ Y+ + LH H EF +V G ++ +R +L G Sbjct: 8 EHRQHGDATFHIQAYHVVLTPGPHQQTVNLHWHSEAEFIVVTRGSVCLQVGSQRHVLADG 67 Query: 70 DFVFIPLGSHHQSFYE---FGATRILNVGI------SKRFFEQHYL-PLLPYCFVASQVY 119 + G H + + G+ S +Q YL PL Sbjct: 68 GVALLSGGELHSMASPGKGPSECKAIVFGLDLLEGPSGDRVQQSYLSPLASGKLRLPGAI 127 Query: 120 RTNNAFLTYVE----TVISSLNFRETGLEELVEMVTFYVINRLRHYR------EEQVIDD 169 ++ ++ + +L + G E V+ + V+ +L + + +DD Sbjct: 128 AHDHPVRPHLAARLCEIAEALEEQPVGYELAVKGCLYDVLAQLFRAKLLVEDSPRREMDD 187 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V D+ + L ++ ++ S+ + R + + PMQ +NE R+ Sbjct: 188 RRADTLKAVLTYIDEHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVAR 247 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 A L+ N S+T I + G+ S FIK F+ TP +YRK L Sbjct: 248 AADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKAL 293 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 106/248 (42%), Gaps = 16/248 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H++ + + G+ F N K + +GD + I H R + I Sbjct: 36 HWHEHLQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYLESLNNDLRFYLIRIDLP 95 Query: 100 FF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMV 150 F ++ PL + + R ++ + ++T+I N +E G E V+ Sbjct: 96 FLFSDQVDLCQTKYLSPLSENLILFKNLIRNDDEIVRCIKTIIKEYNKKEIGYELAVKAN 155 Query: 151 TF-YVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQF------SESALENMVALSAKSQ 203 + V+ +R+Y ++ V + + E+ + +F + + N+ ++ S Sbjct: 156 LYNLVVLLIRNYIDKFVTKRQLAFKINNDERFYKVFEFVHSNFNKKISTLNLSNIAHVSP 215 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 Y R ++ GKT + INE+R+ + + L+ +N ++T++A G++ + F + FKK Sbjct: 216 YYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVNYFSRLFKKK 275 Query: 264 TSFTPKSY 271 +P + Sbjct: 276 YGVSPTKF 283 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 16/264 (6%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 +H I + LH HD ++F +L G IN + + L+ GD VFI G H + Sbjct: 28 YHTKICDHRSGHIPLHWHDEFQFVFILEGEAEFHINEETICLKEGDGVFINCGCLHMAKD 87 Query: 85 EFGATR-ILNVGISKRFFEQHYL------PLLPYC----FVASQVYRTNNAFLTYVETVI 133 G T L + +S F + L P + + ++ N ++T+ Sbjct: 88 ANGTTCTYLCLNVSPHFITANELFTTFVHPYMHASQTPYILLNRKDHWPNHIYQCIQTIQ 147 Query: 134 SSLNFRETGLEEL--VEMVTFY--VINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSE 189 ++ E ++++T + ++ + + D + +K + +H + + Sbjct: 148 RLIDETPAYYELELNIQLITMWKCLLQNGFQIKYDARQHDKNERMKPMLNWIH-QHYHEK 206 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 L+++ S+ R + KTP+ +NE R+ + L+ T++++T+IA++ G Sbjct: 207 VLLQDIARAGQLSRSECCRYFKDILKKTPLHYVNEYRVQQSLILLQETDFNITEIAYKVG 266 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRK 273 ++S S FI FK++ + TP +YRK Sbjct: 267 FNSTSYFISMFKRIKNTTPLAYRK 290 >UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECN2_9CLOT Length = 334 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 20/260 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 +H+HDY+E V G + V +++GD + + H + E + N+ IS Sbjct: 74 MHRHDYFEMIYVYRGGFVNVFPDHTVRMKQGDIMLLNPNILHAPYVERDDDIVFNIFISN 133 Query: 99 RFFEQHYLPL-----LPYCFVASQVY--RTNNAFLT----------YVETVISSLNFRET 141 + +PL L F +Y + +L E +I + Sbjct: 134 PMIREKIIPLQKDNSLLISFFMEYLYFDSQDKKYLNFTDNSPDSILLTEKMIEEYIEQRP 193 Query: 142 GLEELVEMVTFYVINRL-RHYREEQVIDDVPQ--WLKSTVEKMHDKEQFSESALENMVAL 198 + + + + ++L R Y + ID +P+ S + + L+++ Sbjct: 194 FYQNMTDAYLVLLFSQLSRDYYKNHSIDVLPKNHHTLSYDIINYIGQNCRSITLDSLAKH 253 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + YL+R ++ GKT QI+++ ++ A + T+ + DI G+ S FI+ Sbjct: 254 FQYTPNYLSRLIRQSTGKTFSQIVSQQKLQRAAGFITSTDMPIVDIGQIVGFYDVSHFIR 313 Query: 259 TFKKLTSFTPKSYRKKLTEF 278 +FKK TP YRK + Sbjct: 314 SFKKEYHLTPAEYRKTFSSL 333 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 106/280 (37%), Gaps = 22/280 (7%) Query: 16 EQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 E + F +Y E I H H E+ + G +I K + G+ Sbjct: 8 EARAHGDPMFPCNVYRVKEVNGQVIIHCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEG 67 Query: 72 VFIPLGSHHQSFYEFGATRILNV---------GISKRFFEQHYLPLLPYCFVASQV---- 118 +FIP G H ++ L + Y+ + Sbjct: 68 LFIPSGHLHGAYPVSDKPFSLYATVVHPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCP 127 Query: 119 -YRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY--REEQVIDDVPQWLK 175 + + LT ++ IS +E G E +++ ++ L + R E+ PQ ++ Sbjct: 128 THYWMSDMLTMLQATISQFQQKEEGYELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIR 187 Query: 176 ST--VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 V + D+ + ++ + L S+ + +R + T ++ I+ R+N A + Sbjct: 188 QIKKVLQFIDEHYDEKLTIKQLANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARL 247 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L T+ ++ DI+ G+ PS FIK FK+ TP +R+ Sbjct: 248 LRETDRTIMDISMSVGFDHPSYFIKLFKRHKRCTPSEFRR 287 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 7/244 (2%) Query: 39 LHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +HQH D E LV GR I+ L GD +F G H G +G+S Sbjct: 1 MHQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGVS 60 Query: 98 KRFFEQHYLPLLPYCFVASQVYR--TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVI 155 + A Q+ +A T T + + +++ +T ++ Sbjct: 61 DFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAPC--VLDQLTCAIL 118 Query: 156 NRLRH--YREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRY 213 +L R Q + L TV+ D L+++ A + YL A + + Sbjct: 119 CKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAFREH 178 Query: 214 YGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 G +PMQ I RI A+ L T+ S+T+IAF GY++ + F FK+L TP YR+ Sbjct: 179 IGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRR 238 Query: 274 KLTE 277 + Sbjct: 239 DWVQ 242 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 113/285 (39%), Gaps = 24/285 (8%) Query: 14 AREQQLFNGKNFHVFIYN---KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +EQ + +YN + + H HD EF +L G I+ K + GD Sbjct: 9 LKEQVNHGNMQLPLEVYNVEFRNSADFYSHWHDEMEFIYILNGSAEICIDFKIFSVTTGD 68 Query: 71 FVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYL---------PLLPYCFVASQVYR 120 F+ IP GS H E + + + E + L P++ + R Sbjct: 69 FIIIPNGSIHYMIGKENSKISYVALVFNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIR 128 Query: 121 TNN----AFLTYVETVISSLNFRETGLEELVEMVTFYVINRL-------RHYREEQVIDD 169 T+N + +I S N + G + ++ F + + + + E D Sbjct: 129 TSNVGHAKIVNSFNNIIESYNNKSYGFQLEIKGSLFSIFSTIFKEGYISLNLNSENYSDL 188 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + V K + +++ + ++ S+ + R + GKT Q IN RI Sbjct: 189 IKVENLKEVIKYIQTNYKNPISIKELADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQK 248 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A L TN S+T+IA+E G+ S FIKTFKK S +P YRK Sbjct: 249 ATLLLFDTNLSITEIAYEVGFGDVSYFIKTFKKFLSISPTKYRKS 293 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 93/251 (37%), Gaps = 12/251 (4%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGI 96 G H H + E + +G I+ +GD V +P G H++ Y G + + Sbjct: 26 GAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRTTYNGKGMHERIVISF 85 Query: 97 SKRF---FEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMV--- 150 + L + V YV ++ L F +EL Sbjct: 86 RNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSPAFIKV 145 Query: 151 ----TFYVINRLRHYREEQVID-DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 I R ++Y E + + DV + V + +LE + S+ Y Sbjct: 146 GLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLSRSY 205 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L++ + G + I +RI A L TN S+TDIAFE G++ + F F+K Sbjct: 206 LSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRKAKG 265 Query: 266 FTPKSYRKKLT 276 +P YRK T Sbjct: 266 ISPHKYRKNET 276 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 96/275 (34%), Gaps = 16/275 (5%) Query: 15 REQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E + +F Y+ TES H H+ E +++G + IN GD Sbjct: 7 KEIKHHGTADFPAGYYHVTESHPQYAMPYHWHEELELIHIISGTFHVTINETTRNAVPGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILNV---GISKRFFEQHYLPLLPYCFVASQVY---RTNNA 124 + + G H L +S + + +L L + Y + A Sbjct: 67 ILLVNSGGLHGGTPYDCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAGDDTA 126 Query: 125 FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV------PQWLKSTV 178 + +E + + + + G + + + + L R D +L V Sbjct: 127 IHSLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNV 186 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + L + + S +Y G+TP+ +N R+ A L Sbjct: 187 LNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIG 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +S+TDIA G++ S F + FKK +P Y K Sbjct: 247 HSITDIAMLCGFNDVSYFTRAFKKYKGISPGQYLK 281 >UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU1_BACSK Length = 308 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 27/292 (9%) Query: 13 TAREQQLFNGKNF------HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 A ++QL +G + H+ I+ H HD E +GR ++G+ L+ Sbjct: 6 DAYKEQLPSGNDIREPIHCHMQTSEPNRRIASPHFHDAIELLYSFSGRARVFVSGQPFLM 65 Query: 67 ERGDFVFIPLGSHHQSFYEFGA-TRILNVGISKR---------FFEQHYLPLLPYCFVAS 116 E+GD V I H + E G L + + F ++ P Sbjct: 66 EKGDLVIINSNEVHAIWGESGEKVEYLVIKLDPEVLYSTSRSIFESKYVFPFTMSKSSPQ 125 Query: 117 QVYRTNNAFLTYVETVISSLN----FRETGLEELVEM-VTFYVINRLRHYREE------Q 165 + ++ T + I+ +N ++ G + + + + + LRH+R+ + Sbjct: 126 TLLKSGEMASTVIPATIAKINDEFSHKDYGYDFAIRIHICTIFLAVLRHWRQSGISVGTE 185 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 I+D L V ++ + + + A S Y +R + G++ +++N I Sbjct: 186 SINDSDFQLMRQVFQLLESHYATALTAKQAAATCNLSYSYFSRKIKSITGRSFTELLNYI 245 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 RI A+K L T+ S+T++A GYSS S FI+ FK+ +P ++K+L + Sbjct: 246 RITEAEKLLTTTDLSITEVAVSVGYSSTSYFIQHFKQAKHLSPLRFKKRLQQ 297 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 17/253 (6%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH----QSFYEFGATRIL 92 G H H++ E T V G I G+ V +E G FIP+G H ++ + + Sbjct: 33 MGEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSHVFRPKTPKKDRPLIVY 92 Query: 93 NVGISKRFFEQH-----YLPLLPYCFVASQVYR-----TNNAFLTYVETVISSLNFRETG 142 N + + + Y + CF + + + + + Sbjct: 93 NCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGEYHAMFRELYQEFAAKPPA 152 Query: 143 LEELVEMVTFYVINRLRHYREEQVID--DVPQWLK-STVEKMHDKEQFSESALENMVALS 199 ++ + ++ L ++ + + D PQWL D+ SE L + A + Sbjct: 153 YMAVLASLVMRILTGLYRHKLQIIAPAGDRPQWLSVDEAIAFIDRNYASELKLGELAAQA 212 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S+ +R +R+ G + ++ + IR++ A + L + SV DIA GY+ F + Sbjct: 213 KLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSVEDIAGAVGYADMKFFYRL 272 Query: 260 FKKLTSFTPKSYR 272 FKK T TP+ YR Sbjct: 273 FKKKTGVTPRQYR 285 >UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GD53_GEOUR Length = 291 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 103/272 (37%), Gaps = 10/272 (3%) Query: 14 AREQQLFNGKNFHVFIYNKTE---SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 R F G VFI +I+ H H Y F L I GK VL + G Sbjct: 21 LRYVDCFIGNEIGVFIPAVGPCFYAITPDHSHPAYSFVLTFDSYTRLAIGGKTVLSQPGQ 80 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHY--LPLLPYCFVASQVYRTNNAFLTY 128 + I + H R + + I + FE+ P + + + + Sbjct: 81 IMAIDPDAVHHEMTADETPRYIAIFIDRDLFEKELGRYPSIRPRPFRFRTFTPGREMMGL 140 Query: 129 VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ----WLKSTVEKMHDK 184 ++ ++ R E L+ + +++ L + D + +E + Sbjct: 141 LKEFMNEAEARLPAREPLLAAIGTRIVHALIRAAHGIITPDASIGNRVEIHRVIEYI-QT 199 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 + ++ + A++A S + +R +R G P+ +N +R+ A+K L SVT + Sbjct: 200 HAGKKLSIGQLAAVAAMSTSHFSRIFKRETGHPPLAYLNRVRLEQARKLLRTGECSVTSV 259 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A G++SPS F +F++ +P + K Sbjct: 260 ALSCGFASPSHFTDSFRRFYGQSPTDFLKSYK 291 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 93/284 (32%), Gaps = 22/284 (7%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 E + G++F IY + +H H+ E V GR ++ + Sbjct: 52 YGYHEIKEHAGRDFPFNIYPCSIPADFRQVPVHWHEDMEIIAVKKGRGVVTVDMEPYEAR 111 Query: 68 RGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQV-------- 118 G+ V + G H N+ L Y F+ Sbjct: 112 AGEAVVVFPGQLHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPL 171 Query: 119 -----YRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY---REEQVIDDV 170 AF+ + + + + V+ F+ + + Sbjct: 172 HITGGLPDYGAFMECIGILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKS 231 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + +K +E M ++ + +E+ L S + + ++Y G +Q +NE R+ A Sbjct: 232 RERMKRLLEYM-EEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKA 290 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L T VT +A G+ + S F + F++ TP YRK Sbjct: 291 AGMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 99/265 (37%), Gaps = 17/265 (6%) Query: 22 GKNFHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 + + ++ + GLH+HD +E + G IN + RGD + H Sbjct: 11 SPDLPLAVWPVQKAGAIGLHRHDCFELVFITRGTGLCRINDLSYPVLRGDVYILNPHDTH 70 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY-----------V 129 + + N+ + QH L P + RT+ Sbjct: 71 C-YEMASSCTFYNILFRRELL-QHEPALTP--LLDDWESRTDRKLYQLENDETDAEEFRF 126 Query: 130 ETVISSLNFRETGLEELVEMVT-FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFS 188 + +I L R G E V + +++ LR E+ I + S V + + S Sbjct: 127 QEIIVELKKRLPGYEAAVRALFAVFLVRLLRRGNCERHIPPGHRPSASKVFEYINAHLGS 186 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 +L + ++ S A +++ G + I +RI A++ LE ++ +IA Sbjct: 187 TISLRELAGVAGMSTPAFAGAFRQWTGNSVPGHIGALRIRQARRLLEERKLTIGEIALRL 246 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRK 273 G+ F + F+K T +P+ YR+ Sbjct: 247 GFYDTCHFSRVFRKKTGLSPREYRQ 271 >UniRef50_Q28QP5 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28QP5_JANSC Length = 284 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 11/265 (4%) Query: 19 LFNGKNFHVFIYNKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 L G+ FH +E+ L H HDYYE L+ G+ + ING +LE G VF+ Sbjct: 14 LSPGEAFHFVRKELSEASPVLEHDHDYYELFLIQQGQVYHWINGLEEMLEPGHMVFVRPS 73 Query: 78 SHHQSFYEFG-ATRILNVGISKR---FFEQHYLPLLPYCFV--ASQVYRTNNAFLTYVET 131 H G +ILNV + Y + F + T E Sbjct: 74 DRHALQGAPGTGAKILNVMFRTQTAAHLVTRYADVFGGRFFWQPGPLPVTLRLHGPQRER 133 Query: 132 VISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDD--VPQWLKSTVEKMHDKEQFSE 189 I+S+ +T L + ++++ + H + I D P WL + F + Sbjct: 134 AINSMLTLDTSFRNLAR-IELFLLSVMTHVLDTGEIVDGRAPGWLLQACHAAREPRVFRQ 192 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 A + + + +SQ ++ R +RY G +P Q +N IRI A L T + DIA + G Sbjct: 193 GA-DGFLHAAGRSQAHVCRQARRYLGLSPTQYVNRIRIQHAAMLLAGTERGLPDIAADCG 251 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKK 274 + + S F + F++ TP+ YR + Sbjct: 252 FENLSYFHRLFREQYGTTPRGYRHR 276 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 16/272 (5%) Query: 14 AREQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +EQ+ F +Y E + H HD E G Y +N ++ +E Sbjct: 8 LKEQKDHGTSLFPCALYEVCEEKNWSGVPHHWHDEMEILYFSKGSYTLFVNMEQFQIEEK 67 Query: 70 DFVFIPLGSHHQSFYEFGATR---ILN---VGISKRFFEQHYLPLLPYCFVASQVYRT-N 122 F FI G H +T + + +G + F Q P P + YR Sbjct: 68 CFYFIYPGELHAIVPHSDSTESALVFHPSLLGFEYKLFPQCLKPSNPAFSPFEKEYRKVF 127 Query: 123 NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMH 182 + F + E +S+ F ++G+ ++ +++ + + E+ D + +K+ ++ +H Sbjct: 128 HIFHQFPEDSLSARLFIQSGIFKMAGILSTF----PSLLQTERKTDMRIETIKTALDFLH 183 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 Q + + ++ +++Y R ++ GK+P+ +NE RI A L+ T+ + Sbjct: 184 SHYQ-EKLYIRDLALQVNMNEQYFCRFFKKVLGKSPITYLNEYRIKQACILLQTTDLPIM 242 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 ++ + G+ F+K FKK T TP YRKK Sbjct: 243 EVGMDCGFFHLGNFMKEFKKYTETTPLQYRKK 274 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 97/248 (39%), Gaps = 8/248 (3%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 +++ H H+YYE + G + + ++ G+ + H+S+ E + Sbjct: 36 NDNMMKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKR 95 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTN----NAFLTYVETVISSLNFRETGLEELV 147 + + LL + +YR + +E +I + Sbjct: 96 IVLYFESSEVASK--ELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYR 153 Query: 148 E-MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYL 206 ++ ++ L H R + + + + LE + SQ YL Sbjct: 154 RTLLNMFLFTMLMHTRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQKFYVSQFYL 213 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 R +RY T +Q +N R+ A+++L T+ ++T+I+ E G+S+ + F + FK +T Sbjct: 214 CREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGT 273 Query: 267 TPKSYRKK 274 TP YRK Sbjct: 274 TPSGYRKH 281 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 107/277 (38%), Gaps = 23/277 (8%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 G + + + + H HD+ E L+ G + G + GD VF+ G Sbjct: 39 GSDSEITHEHDLTEVR--HTHDFCELALITRGSAMHWLEGAEFPITAGD-VFVLQGQQSH 95 Query: 82 SFYEFGATRILNVGISKRFFEQ-----HYLPLLPYCFVASQVYRTNNAFLTYVETVISSL 136 +Y+ ++N+ +P F+ ++R + F +++ S+L Sbjct: 96 YYYDLQKLEMINIMFDPEQLNLPETRLRKIPGYRALFLLEPLFRKQHRFTSHLHLSRSTL 155 Query: 137 NFRE--------------TGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLK-STVEKM 181 E G E + ++ L +E + L+ + V Sbjct: 156 AHSERIAVELDNEVRGKMEGYEAAMFAKFVELVVYLSRLYQETESTNAEALLRVAKVIGS 215 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + E +E+ A++ S+ R + G+TP+ + ++RI + L T S+ Sbjct: 216 IEDEFTKPWKVEDFAAMAHMSRANFMRVFRTATGETPINYLLQLRIQKSMTLLTSTKLSI 275 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 ++IAFE G++ + + + FK +P +YR+ T F Sbjct: 276 SEIAFEVGFNDSNYYTRQFKASQGISPLAYRRTHTGF 312 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 100/255 (39%), Gaps = 16/255 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H++ + ++G E ++ D V + H + Sbjct: 34 HWHEHLQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLESTSDNLVFYTIRFEPS 93 Query: 100 FFEQHYLPLLPYCFVA---------SQVYRTNNAFLTYVETVISSLNFRETGLEELVEMV 150 F +++ LL ++ + + + N V+ V+ ++ G E ++ Sbjct: 94 FLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIGYELAIKGY 153 Query: 151 TFYVI-----NRLRHYREEQVIDDVPQWLK--STVEKMHDKEQFSESALENMVALSAKSQ 203 +Y++ N ++H + +DD L ++ +K+ + L + S Sbjct: 154 IYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSKLANTVGLSV 213 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 + R+ ++ GKT IN IR++ + L+ T+Y++T+IA G+ + + F + FKK Sbjct: 214 HHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNYFSRIFKKY 273 Query: 264 TSFTPKSYRKKLTEF 278 S +P YR Sbjct: 274 HSTSPSQYRNLYKNL 288 >UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG6_9CLOT Length = 334 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 107/264 (40%), Gaps = 22/264 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 H HD++E V G Q K + D + + + H + + N+ ISK Sbjct: 67 FHCHDFFEMIYVYRGNCLQRFPDKEFTMREHDLLLLNPYTIHAPYTIKNEDSVFNILISK 126 Query: 99 RFFEQHYLPLLPYC-----FVASQVYR-------------TNNAFLTYVETVISSLNFRE 140 FE+ L L+ F+ + +Y+ N L VE++I +E Sbjct: 127 TLFERSLLSLISDNRIFSEFIINCLYQSSKSNDYLYFPANENEPVLDLVESIIIEYLEKE 186 Query: 141 TGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST----VEKMHDKEQFSESALENMV 196 ++++E + +L ++ +V + K+T + E +LE++ Sbjct: 187 LSYQKVMEASLVLLFAKLSRIYHKRFSSEVLENQKNTQTIVSILAYINENAPNVSLESIS 246 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 S +L+R ++ GK QI+ + +I A+ LE + ++ +I +G+ S + F Sbjct: 247 ERFNYSTGHLSRMIHQFTGKPYSQIVQKFKIERARSYLENSELTIPEIMELSGFHSANYF 306 Query: 257 IKTFKKLTSFTPKSYRKKLTEFNQ 280 + FKK TP YR N+ Sbjct: 307 YRMFKKFYLMTPNEYRSNYAAANK 330 >UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8E9_PAESJ Length = 294 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 121/295 (41%), Gaps = 21/295 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEIN 60 + + E+ +N KNF ++I T + + H H EF LVL G +N Sbjct: 1 MQLDVFSDLSERLNYNLKNFQLYIKKGTLMPFDKYAAACHWHPDLEFILVLDGYMNFFVN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNV-----------GISKRFFEQHYLPL 108 G+ VLLE+G +F+ H + + V I K ++E+ + P Sbjct: 61 GETVLLEKGTGIFVSSKRLHYGYSPDKIDCSYIVVCIHPSLLGNEQWIGKEYWEEKFGPN 120 Query: 109 LPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEM---VTFYVINRLRHYREEQ 165 V ++ + L + + ++ + L+ + +T + +R+ +E Sbjct: 121 TEDFIVLTEHESWHKDALVSLNQLYEEMHATKRNPIRLLSIAMSLTANIGDRIGEKKEPT 180 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 ID ++ +H + + L+++ A + S+ +Y ++P + + Sbjct: 181 AIDPSWFYVWKMTAFIHGHFEH-KITLDDIAAAGSVSRSQCCILFGKYVEQSPNTYLMKY 239 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 RI + + L T+ S+++IA G+ S S + F+K P YR++ + +Q Sbjct: 240 RIKKSCELLSETDRSISEIAISCGFQSSSYYTFVFRKELGIVPNEYRRQYRDAHQ 294 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 11/249 (4%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNV 94 + H H YYE +L+G+ I+ L+ GD V IP H++ YE G ++ Sbjct: 34 MKRPHYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALYEEGLQAERYDM 93 Query: 95 GISKRFFEQHYLPLLPYCF---VASQVYRTNNAFLTYVETVISSLNFRETGLEELVEM-- 149 +K + + F + +E ++S L+ + + Sbjct: 94 YFTKEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHENGQEDAYSHVQQ 153 Query: 150 --VTFYVINRLRHYREEQVIDDVPQWLKSTV---EKMHDKEQFSESALENMVALSAKSQE 204 + F ++ + ++ Q D ++ + + + + L+ M A+S S Sbjct: 154 QSLLFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHLTLDAMAAMSNMSPT 213 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y +R + G + +N IR+ A L T+ +VT IA G+S + F FKKLT Sbjct: 214 YFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFKKLT 273 Query: 265 SFTPKSYRK 273 +P+ YR Sbjct: 274 GLSPREYRN 282 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 7/249 (2%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 ++++ H HD++E +L G I G+ L DFV P H S+ E + Sbjct: 24 NDNMTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKR 83 Query: 92 LNVGISKRFFEQHYL--PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV-E 148 + + S + L + N L+ + ++ ++ + + Sbjct: 84 IVLYFSPDLIANDTICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVPGKYHDAYICN 143 Query: 149 MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTR 208 + ++N LR + + + +P+ + + ++ + + S +L Sbjct: 144 QLNGLLLNMLR--LDFEAVKSIPKTRSAKAVDYIHNHYMEDISVNQLAEILYVSPYHLCH 201 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 + GKT +Q +N RI A++ + T+Y++T I+ E G+S+ + F +TFKK+T P Sbjct: 202 EFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVAP 261 Query: 269 KSYRKKLTE 277 + +KKL + Sbjct: 262 RE-KKKLYQ 269 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 94/251 (37%), Gaps = 17/251 (6%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-RILNVGIS 97 LH HD E ++ G ++ + GD +F+ G H + N+ Sbjct: 43 LHWHDEVEIIVIKKGSGIVSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIMEYENILFK 102 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTNN-------------AFLTYVETVISSLNFRETGLE 144 + L F+ + N +T + + + R + Sbjct: 103 SSLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQ 162 Query: 145 ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSE-SALENMVALSAK 201 ++ F ++ L + I + Q ++ + + F E A+E++ Sbjct: 163 LSIKAHLFQILYTLVSNCGQNKIKPINQKSLKKIKTILSYIANNFQENIAIEDIANYCFY 222 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S+ Y + + G + +Q +N+ R+ A + L T ++ DIAF G+++ S F + FK Sbjct: 223 SKSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFK 282 Query: 262 KLTSFTPKSYR 272 K +P+ YR Sbjct: 283 KKYGVSPRKYR 293 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 24/276 (8%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 +PE TA+ L N + + + S H H + E V G+ I + + Sbjct: 9 SPEHPTAQNITLLNTSSSRY----EGDWPSIPHSHAFTELFYVRDGQGDFLIEDQIFPIS 64 Query: 68 RGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN--- 123 + D V I +H + VG+ L + F + YR N Sbjct: 65 KDDLVIINPHINHTEISKGSPPLSYFTVGVDG----------LCFSFNGHKEYRIFNCRE 114 Query: 124 ---AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE---EQVIDDVPQWLKST 177 L Y ++ L+ + G E + + +I +LR + E + P + Sbjct: 115 KKTDLLFYFNSLFQELDRQSEGYETICSHMLDILILQLRRITDSPFELITAQHPSKECAH 174 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 +++ D L+++ LS ++ YL+ +YYG +P+ +N RI K+ LE T Sbjct: 175 IKRYLDSNYGENITLDHLSELSHLNKYYLSHEFTKYYGISPINYLNRKRIEVCKELLENT 234 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +Y ++DIA G+SS S ++F+K T +YRK Sbjct: 235 DYGISDIAHLTGFSSQSYLSQSFRKSCGMTAGTYRK 270 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 106/295 (35%), Gaps = 21/295 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKT--ESISGLHQHDYYEFTLVLTGRYFQE 58 M + N RE F V Y+ + H HD +E +V G Sbjct: 1 MALSLCNTTTNEHGRELVEHGTVLFPVACYDDDLIKKSVPWHWHDEFEAVIVSEGTALIA 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGA----------TRILNVGISKRFFEQHYLPL 108 K+ L++G+ +FI G H ++ + + R++ I F+ + PL Sbjct: 61 AGTKKYTLKQGEGIFINAGILHAAWSKNCSICHLHSITFHPRLIGGSIDSIFWHNYVQPL 120 Query: 109 LPYCFVAS----QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE 164 L V + +E+ +S G E V +I L Y Sbjct: 121 LTNPIVKHIHLDSSEAWHKEATHAIESAWNSCANEPFGYEFQVHSSLSQLILHLSAYHPV 180 Query: 165 QVIDDVPQWLKST-----VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 + L+++ + + + + + + S+ R + G P+ Sbjct: 181 ISRQPSEKVLRNSNRLKLMLQFIQDHYHDQINVSMIADTAMISESECLRCFRNIIGIPPI 240 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 Q + + RI A + L TN ++T I + G+ S F+KTF++ TP YRK Sbjct: 241 QYLKQFRIQKAVEFLTSTNETITKIGAKCGFQDTSYFVKTFREQKKCTPSEYRKN 295 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 8/243 (3%) Query: 39 LHQHDY-YEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI-LNVGI 96 +H+HD+ E LV G I+G+R ++G+ + + H F G+ + + I Sbjct: 1 MHEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNLVTYCIAI 60 Query: 97 SKRFFEQHYLP-LLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVI 155 + LLP + Q R + A V+++ ++ E+ +T +I Sbjct: 61 GGLRIDGLPADHLLPDGYCPVQPLRQHFA---EVQSLFDAIEKEAKSHAEIANYLTMALI 117 Query: 156 NRLRHYREEQVIDDVPQW--LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRY 213 +L + E+ + + Q L + DK L ++ + + YL+ + Sbjct: 118 TKLAAFLREEGLQEEQQTPTLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHLFKAE 177 Query: 214 YGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 G +PM+ + RI A+ L T+ ++T IA + GY++ + F FK TP YR+ Sbjct: 178 IGLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPGEYRR 237 Query: 274 KLT 276 K T Sbjct: 238 KWT 240 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 91/248 (36%), Gaps = 14/248 (5%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H E + G F ING ++ +GD +FI H++ YE + + Sbjct: 56 LHWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRA-YETENLVMDVIMFEP 114 Query: 99 RFF--EQHYLPLLPYCFVA----SQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTF 152 + + P L F + + ++ + ++ R T L+ Sbjct: 115 SLLSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSDLI 174 Query: 153 YVINRLRHYREEQVIDDVPQW------LKSTVEKMHDKEQFSESALENMVALSAKSQEYL 206 ++ + + P LK + M + L+ + L+ S Sbjct: 175 RFLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYG-WTLQELSDLTHLSPSRF 233 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 + Q+ G +P + ++R+ A LE T+ + +IA G+ + S F + FK+ Sbjct: 234 SALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQHVGA 293 Query: 267 TPKSYRKK 274 +P R++ Sbjct: 294 SPSEIRER 301 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 103/260 (39%), Gaps = 15/260 (5%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 + + H H+ E VL+G E + L++G +F+ G+ H+ Sbjct: 21 YYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEGSYQLKKGQIIFLDAGTRHRLIV-SE 79 Query: 88 ATRILNVGISKRFFEQHYLPLLPYCFV------------ASQVYRTNNAFLTYVETVISS 135 R+ NV S + P C + + + + +I Sbjct: 80 RCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLHDTDDTYQCLRRLILE 139 Query: 136 LNFRETGLEELVEMVTFYVINRLRHYREEQVID-DVPQWLKSTVEKMHDKEQFSESALEN 194 ++ + + +V+++ + R+ E +V + D ++K + +H E ++ + Sbjct: 140 VDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKRALAYIHQNYD-REVSVAD 198 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + YL R + + GK+ + + RIN AK L+ T+ S+TDI G +S Sbjct: 199 IANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDIPHYIGMNSQQ 258 Query: 255 LFIKTFKKLTSFTPKSYRKK 274 F TFKK TP YRK+ Sbjct: 259 YFSTTFKKHVKCTPSEYRKR 278 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 108/264 (40%), Gaps = 12/264 (4%) Query: 20 FNGKNFHVF-IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 FN + + F +N+ H H++ E +++L G + G++ G + Sbjct: 9 FNPEILYAFDPWNEETHPYNCHHHEFLEISILLEGESEYIVQGQQYHATAGTVFLFNPRT 68 Query: 79 HHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN 137 H + G + L++GIS + E + P + + AFL ++ LN Sbjct: 69 EHGEQQKAGTYSHQLHIGISNLYLEGLARNVFPNKSALLDLSHLHGAFLEKAWQIVHELN 128 Query: 138 FRET----GLEELVEMVTFYVINRLRHYREEQV------IDDVPQWLKSTVEKMHDKEQF 187 +E ++ LV + Y++ L +E ++ + + L + + Sbjct: 129 HQEVESALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTIYYLETHHD 188 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 E LE + + + YL++ + G P+ + +IR+N AK+ L+ + SV ++A Sbjct: 189 EEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKEVAKT 248 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSY 271 GY F K FKK +P + Sbjct: 249 VGYEDAYHFSKLFKKYYGKSPSQF 272 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 122/309 (39%), Gaps = 42/309 (13%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISGL--------HQHDYYEFTLVLTGRYFQ 57 + +I +E +L F Y + S H H+ E G + Sbjct: 1 MKHSDITPLKENRLHGTAAFPCACYQADSAASPAGTPFLAKHHWHEELEIIYFEQGCFHL 60 Query: 58 EINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPL 108 EIN ++ +E F I G H + E R + S E+ PL Sbjct: 61 EINMEKYEIEEECFCLIKSGDLHYIYSE-KDYREMAFVFSLSMLRAFAADPVQEKLVQPL 119 Query: 109 LPYCF-VASQVYRTNNAFLTYVETVIS--------------SLNFRETGLEELVEMVTFY 153 + +YR N F+ + +R + L + + Sbjct: 120 AEGSLSLPGLIYRQNPCFVILKREFLQIADAAGLPSGASNLRSQYRVSSLPQYMRA-KAS 178 Query: 154 VINRLRHYREEQVI-------DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYL 206 ++N + E+ ++ D +K T+ M + + ++ + A + +++Y Sbjct: 179 LLNIFAAFSEQNLLAVSQMPADRRVDTVKKTLSYM-QEHMTEKVTMQELAAQANMNEQYF 237 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 R ++ G+ P+ +NE+RI +A + L+ T++SVT+IA E+G+++ F++TF+ + Sbjct: 238 CRFFKKIIGRPPITYLNEMRIRYACRLLKETDHSVTEIALESGFNNLGNFMRTFRLVCGC 297 Query: 267 TPKSYRKKL 275 TP YRK L Sbjct: 298 TPLQYRKGL 306 >UniRef50_C0EDY4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDY4_9CLOT Length = 345 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 108/272 (39%), Gaps = 22/272 (8%) Query: 25 FHVFIYNKTESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 FH + K + + H HD++E + V G + I G+++ V + + H+ Sbjct: 65 FHGCPWRKEPARNPNPYPHNHDFFEMSYVYKGTFHNIIGGQQIDQPEDSLVLLSPQAKHR 124 Query: 82 SFYEFGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRT-----------NNAF 125 F + N+ I + E+ ++ +L F +Y +NA Sbjct: 125 CFTRSSEDLVFNILIKRELIEKIFVQMLSESESVCRFFLDSLYNVRQKQPYLFFSCDNAL 184 Query: 126 LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE---EQVIDDVPQWLKSTVEKMH 182 + ++I ++ + +++ + ++L + E+ + + + + Sbjct: 185 TELIHSIIEEYFQQQDFYQSIIQAKLIELFSKLSRLHQKNAEETPAETSNFQLILQIEDY 244 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + +S L ++ + YL+R Q+ + + ++ +IR+ A + L ++ + Sbjct: 245 IERHYSTVTLSSIAEHFNYTPSYLSRLIQKQFNQKFSCLVQDIRLKHACRYLAHSSLPID 304 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + GY+ S F + FK+ + +P YRK Sbjct: 305 QVVEIVGYNDVSHFYRVFKQKHNVSPNQYRKS 336 >UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/XylS family) n=2 Tax=Bacillaceae RepID=B1HRT8_LYSSC Length = 294 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 115/295 (38%), Gaps = 22/295 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRY 55 M P+ + +E L K F V +Y T ++ LH H +F + +G Sbjct: 1 MRLPLTHIKIAKDLQELTLHGSKEFPVALYETTMNMDSMDFLPLHWHKEIQFVYLKSGCA 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQ---------SFYEFGATRILNVGISKRFFEQHYL 106 + ++LE G+ +FI H+ Y I+ G F +Y+ Sbjct: 61 KYRVGANVLVLEEGEGLFINTSELHEAKPFQMEHAIVYCINVDPIIIGGHDGSIFMTNYV 120 Query: 107 PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV---EMVTFYVINRLRHYRE 163 PY Q Y LT ++ + ++ +L E++ + + + Sbjct: 121 Q--PYLTTHRQPYLKLTKELTQKVACMADILQKQEAFYQLKVWRELLYIWEVMLTQSLLT 178 Query: 164 EQVIDD---VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 E+++D V Q + + LE++ S+ +R ++ G TP Sbjct: 179 EEIVDPSIIVQQERAKAMLNFLHTHYQQKITLEDLAKHVYLSRAECSRYFKKVIGLTPFT 238 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + + R+ + + L +VT IA G+S+ S +I+ FK+ T ++P YRKK Sbjct: 239 YLLQYRLRKSIELLRDDEQNVTIIAANTGFSTVSYYIEKFKEYTGYSPHVYRKKF 293 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 110/291 (37%), Gaps = 29/291 (9%) Query: 8 APEIATAREQQLFNGKNFHVFIYNK---TESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 E A +E+ + KN+ +F+ + T LH H+ E + +G + ING++ Sbjct: 5 MREEAIPKEKVIL-AKNYPIFVADTIGVTSPYQKLHWHNVLEINYIKSGMGYYIINGQKF 63 Query: 65 LLERGDFVFIPLGSHHQSFYE----------FGATRILNVGISKRFFEQHYLPLLPYCFV 114 ++GD + I H ++ I N+ F P Sbjct: 64 EFQQGDVLLINSNDLHCAYETKDLVMTVISFDSTWFIHNLRFDPELFS----PFREMGKH 119 Query: 115 ASQVYRTNNAFLTYVETVISSLNFRETGLEE-----LVEMVTFYVINRLRHYREEQVIDD 169 + ++ + + +++ L G + + ++ ++ R R E Sbjct: 120 YMNLIPRDHPAMGKLRSLLFELQEEHVGEQRSYATVVYSLLLQFLATVNRQCRIEGEGGS 179 Query: 170 VPQWLKSTVEKM------HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 P + +EKM ++ LE + +L S + +R G P+ + Sbjct: 180 EPSISERQLEKMRQVIMVMEQNFAHPWTLEELASLVYLSPSRFSEIFKRAVGMPPLLYLI 239 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 IR+ A LE + V D+A E G+ + + F + FKK TPK+ +K+ Sbjct: 240 HIRLEQAVTMLEGGHMKVMDVALECGFRTLTNFNRLFKKHIGMTPKASQKQ 290 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 123/285 (43%), Gaps = 24/285 (8%) Query: 15 REQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E++ + IYN + E H H+ E LVL+G + +IN + GD Sbjct: 7 KEKREHGNFLLPLGIYNVSLGNIEKSIIAHWHNEIELILVLSGEFNLKINTDSYTCKDGD 66 Query: 71 FVFIPLGSHHQ-SFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA-------------S 116 + I GS H S E ++ ++ + + L F+ Sbjct: 67 IILINSGSLHYFSTKENESSTWNSIVFNMDQLNSNILDNCSVNFITPIINNEFKLPVIIH 126 Query: 117 QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKS 176 + NN + +I + N + G E ++ + F + L + + + + Sbjct: 127 KDSLINNELKCIILNIIDTYNSKYYGFELEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEE 186 Query: 177 TVEKM-----HDKEQFS-ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 +EK+ + +E ++ E + + A+ +Q + R +++ GKT +Q I R+ A Sbjct: 187 KIEKIKIVLEYIQENYNKEIDINRLSAICHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKA 246 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + T+ S+T+I+ E G+++ S FI++FK+ + TPK ++ +L Sbjct: 247 ASLISNTDLSITEISLEVGFTNISYFIRSFKEKYNTTPKGFKTRL 291 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 106/253 (41%), Gaps = 7/253 (2%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 + + + S H H + E V++G + ++ GD V IP H G Sbjct: 26 VKDDKDWNSVFHTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYLEHTEQSVKGK 85 Query: 89 T-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV 147 + +GI K F F +R ++ ++ + + G E + Sbjct: 86 SLEYYVIGIDKISFLAENGQTGIQAFCN---FRDQSSVSDIFAQMLYEMRNDDYGSEIIC 142 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLK---STVEKMHDKEQFSESALENMVALSAKSQE 204 + + +I R+ + I + + + +++ D L+ + +L+ ++ Sbjct: 143 QNLLEILILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERITLDTLTSLTHMNKY 202 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y+ + +Y G +P+Q +N R+ A L T++SV+DIA G+SS S F ++F+K Sbjct: 203 YMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFRKYY 262 Query: 265 SFTPKSYRKKLTE 277 TP YR++ E Sbjct: 263 GMTPLQYRQQNAE 275 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 99/255 (38%), Gaps = 15/255 (5%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR-ILN 93 S+ H H++YE +L+G +N + +G+ + I G+ H++ Y G + + Sbjct: 19 SMKDAHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHRTTYISGGSHERIC 78 Query: 94 VGISKRFFE---QHYLPLLPYCFVASQVYRTNNAFLTYVETVIS----SLNFRETGLEEL 146 + SK F + Q + + R + Y E +IS + +++T L Sbjct: 79 ITFSKSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKAHREMMYQDTYSLYL 138 Query: 147 VEMVTFYVINRLRHYREEQVIDDVPQW-------LKSTVEKMHDKEQFSESALENMVALS 199 + +I + DD+ + + K S LE A Sbjct: 139 ASSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYICSNYQSPVTLEETAAYC 198 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S Y ++ + G + + IRI A + L T +T+IA +G++ + F Sbjct: 199 NMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIALLSGFNDSNYFGDV 258 Query: 260 FKKLTSFTPKSYRKK 274 FK++ +P YRK Sbjct: 259 FKRMKGISPCKYRKN 273 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 114/277 (41%), Gaps = 27/277 (9%) Query: 24 NFHVFI---YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 +F FI ++ H HD++E +VL G +N + +++GD + H Sbjct: 14 SFPFFIQYGFHDDAMPEHFH-HDFFELVIVLNGTATHIVNSEEFFIKKGDVFVFNMDLSH 72 Query: 81 QSFYEFGATRILNVGISKRFFEQ-----HYLPLLPYCFVASQVYRTNNAFLTYVETVISS 135 + + +I+N+ ++ P FV +R +F + ISS Sbjct: 73 -GYKDPHNFKIINIMYKPERLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNTLSLSISS 131 Query: 136 LNF--------------RETGLEELVEMVTFYVINRL--RHYREEQVIDDVPQWLKSTVE 179 L + ++ G + ++ ++ L ++ E +++ D L + Sbjct: 132 LEYVAELGARINEEYKRKDQGYQTMIYARFMEMVVYLSRQYIIENKLLHDTFVHLAKAIL 191 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + D + LE + + S + R + YG TP I +R+N A L+ +N Sbjct: 192 FLEDN-YLNPIKLEKLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACSLLKNSNL 250 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + DIA E+G+S + F + FKK+T TPK YR + Sbjct: 251 CIADIALESGFSDSNYFSRQFKKITGITPKEYRARYK 287 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 5/254 (1%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-R 90 ++ S LH H + E V+ G+ I +R ++ DFV I H + Sbjct: 29 DSDWHSTLHTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHTEVSSPDSPLE 88 Query: 91 ILNVGISKRFFEQHYL-PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE- 148 + VGI F + F + L Y+ ++ + + + Sbjct: 89 YIVVGIQGLSFSNLTPVDQGGHPFSFFNLRDEQKDILRYLNAMVQEATNQALSYDLVCHN 148 Query: 149 --MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYL 206 + I R +H+ E + ++ LE + +++ S+ Y+ Sbjct: 149 LLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQLEALASMTHLSRFYI 208 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 + + ++ G +PM+ + IRI +K L TNYS++ +A G+++P+ F K F+K+T Sbjct: 209 SHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTPTYFSKQFRKITGI 268 Query: 267 TPKSYRKKLTEFNQ 280 +P YR+K + +Q Sbjct: 269 SPTDYREKYQKESQ 282 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 108/283 (38%), Gaps = 25/283 (8%) Query: 14 AREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E+ + NF + I+ ++I LH H+ +E+ V GR +++ + + + Sbjct: 6 LKEKVMHGDDNFPIGIHKTDIDKGRDNILYLHWHEGFEYLTVTKGRAVFKVDDLEIEVSK 65 Query: 69 GDFVFIPLGSHHQSFYEFGA--------------TRILNVGISKRFFEQHYLPLLPYCFV 114 G+ +FI H + + +N I++RF L + Sbjct: 66 GEGIFINSNVLHSAHSINEEECSFFAVVCHPAFLSSYINDCINQRFINPILNHSLYFPIH 125 Query: 115 ASQVYRTNNAFLTYVETVISSLNFRETGLEELV-----EMVTFYVINRLRHYREEQVIDD 169 + L + V +E G E L+ E+ + N + + Sbjct: 126 LKKDVDWQRNILLLLTQVYDINKEKEFGYELLLKSKIYEIWFECIKNAKKSINKGSNTSY 185 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + +K + +H+ F++ + +L S E+ R + T + +N RI Sbjct: 186 KTERMKVVLNYIHEN-YFNKIVVSEFASLVHMSDEHFCRFFKAMTHFTLVSYVNRYRIER 244 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + L TN +++IA + G+ S F K F+K+ TP YR Sbjct: 245 SCVFLSQTNKKISEIAGDVGFGDISYFNKVFRKIMGCTPVDYR 287 >UniRef50_C6D720 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D720_PAESJ Length = 289 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 16/262 (6%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-QSFY 84 H + GLH HD++E L+L G ++NG R LL VFI H Sbjct: 17 HYRMIASVHDTIGLHTHDFFELFLILQGSVVHKVNGTRQLLRENTLVFIRDRDVHSYEQT 76 Query: 85 EFGATRILNVGISKRFFEQHYL-------------PLLPYCFVASQVYRTNNAFLTYVET 131 G + +N+ K ++ + P LP + S+ + + + Sbjct: 77 SEGDCQFINLSFYKEVIDELFAFLGAGFPSGKLFEPELPPTLLLSKTEKEYVRYR-LDQI 135 Query: 132 VISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESA 191 ++ L+ + E+ ++T +R E+ P W + ++M KE F+ Sbjct: 136 NLTPLSQKLVVKAEVRALLTDLFFRYIRITAEKDEPYGQPDWFLALCQEMRKKEHFTRGT 195 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 ++ LS KS YL R ++ +P + IN++R+++A+ L T+ + DI+ E G Sbjct: 196 SA-LLQLSGKSHAYLCRVFKQQLRISPTRFINDLRLSYAENLLLNTDMDILDISLETGLE 254 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 + S F + FK+ TP +R+ Sbjct: 255 NVSYFYELFKRKHRMTPHRFRQ 276 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 108/281 (38%), Gaps = 31/281 (11%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 + NG+ FH +H HD +FT V G ++ G+ +L+ G+ +FI Sbjct: 43 KYDIFPNGRGFH-----------DVHWHDEIQFTYVSKGELTMQVEGREYVLKEGEALFI 91 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPLLPYCFVASQVY----RT 121 G H + + ++ + + LP L ++ V Sbjct: 92 NSGLIHVTTSISEDGQYEGFMFPEKLLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRESAE 151 Query: 122 NNAFLTYVETVISSLNFRETG----LEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST 177 + L+ + + N +E E V M ++ Q + + Sbjct: 152 DEKILSDIRNLRELFNNKENVTAFEYEVAVRMTAIWLQIVRNVSDTMQKMPACYLQRQER 211 Query: 178 VEKM--HDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 ++KM + E + E L+ + ++ S E R + +TPM ++ R+ + L Sbjct: 212 MKKMMQYIVEHYHEAITLKEIAESASISIEECRRCFKDIIKETPMHYLSSYRVMVGMELL 271 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 T+ +TDIAF G++ S FI+ FKK TPK YR + Sbjct: 272 RTTDLDITDIAFRVGFNDSSYFIQAFKKKNGMTPKQYRNHI 312 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 98/258 (37%), Gaps = 15/258 (5%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILN 93 ++ H H+ YE +L+G IN E+G + I H+ S E + Sbjct: 25 EMNAPHVHEGYELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLHRTSSTEVQEFERIL 84 Query: 94 VGISKRFFE-------QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEL 146 + S F E LP + R A + + ++ G E++ Sbjct: 85 INFSHDFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEMKKECKLKKEGHEDV 144 Query: 147 VEMVTFYVINRLRHY------REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSA 200 V + F ++ + + + + + + + ++ Q L+ + Sbjct: 145 VRALLFQLLFTIYRSLAGGGRNQTRPLHPMDEKISEIASYINCSFQ-ETMTLDGLAGQFY 203 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 S YL+R ++ G + I IRI AKK+L T+ + DIA + G+ S F K F Sbjct: 204 ISPSYLSRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAADTGFKHISHFNKVF 263 Query: 261 KKLTSFTPKSYRKKLTEF 278 K++ P YRKK + Sbjct: 264 KEIVGIPPLQYRKKSRDI 281 >UniRef50_A4EK09 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EK09_9RHOB Length = 288 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 9/256 (3%) Query: 25 FHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 FH + + H HD++E L+ +G+ +NG+ LE G FI H Sbjct: 18 FHFARKSLAKRFPNAAHDHDFFEVFLIESGQTSHWVNGETQQLEPGHLTFIRPNDVHAFS 77 Query: 84 YE-FGATRILNVGI---SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE--TVISSLN 137 + +I+NV + + Y + F S+ L V I+ Sbjct: 78 ADRTKGCQIINVMFRVETAKHLTNRYAKTIESAFFDSRAALPEMHMLDPVRFARAINVAQ 137 Query: 138 FRETGLEELVEMVTFYVINRLRHY-REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 +T L + F ++ R + + P+W + FS+ A + Sbjct: 138 QLQTAHRSLARIEEFLLVLTNRVADAAGGIAQNAPRWFAEACSAAQSQTVFSKGA-AGFI 196 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 A + +S E++ R + G TP + IN++RI +A L S+ D+ + G+ + S F Sbjct: 197 AAAGRSHEHVCRTCKAVTGLTPSEYINQVRIEYAAHLLRSDERSIDDVVNDCGFDNSSYF 256 Query: 257 IKTFKKLTSFTPKSYR 272 + F++ TP++YR Sbjct: 257 YRLFRRQYGTTPRAYR 272 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 113/281 (40%), Gaps = 22/281 (7%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 RE F K + + G HQHD+ EF V++G E N + + +GD + + Sbjct: 12 RESGDFRPKIMAYYYKQWEDFHMGFHQHDWTEFMYVISGNCTVETNKDVIAMRKGDLIML 71 Query: 75 PLGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLP-------YCFVASQ-----VYRT 121 G H+ E G+ R+LNV + + Y + + + Q V R Sbjct: 72 DAGVPHRLIVESGSPCRMLNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRD 131 Query: 122 NNAFLTYVETVISSLNF----RETGLEELVEMVTFYVINRLRHY----REEQVIDDVPQW 173 + ++ L+ +E G E + ++ ++ R+ + + + Sbjct: 132 YEDIQVNLRNLVFELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHY 191 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 ++ E +H + + +++ A YL R + KT + + ++R++ AK Sbjct: 192 VRQATEYIH-QYYDTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKML 250 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L T+ + ++A G +S F FKK+T +P YRK Sbjct: 251 LARTDVPIIEVADHIGLNSRQYFSMLFKKMTGISPAEYRKS 291 >UniRef50_C6J044 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J044_9BACL Length = 294 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 23/264 (8%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 F +S H HD+YEF ++ G +NG+ LL+ G VFI H+ Sbjct: 19 FRVEALSQVSPEHTHDFYEFFVIEAGSCRHVVNGETQLLQAGCLVFIRPEDIHRYEQNGE 78 Query: 88 ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN------------NAFLTYVETV--- 132 + + L +A ++ +++ F+ E + Sbjct: 79 EDCRFYNVPCRHSLMDEAMAFLGEEEIAERLLQSHLPQVALLSPTEVGEFVALFERIKLL 138 Query: 133 --ISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSES 190 I R L++++T Y N +EE +P WL+ + KM KE Sbjct: 139 SSIDKQKARLVLKSGLIDLLTRYFFNPNPVKQEE-----IPLWLEHALSKMQLKENLHR- 192 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L + LS +S ++ RA +RY +TP + +N+++++ A+ L T V +IA E G+ Sbjct: 193 GLPALYELSGRSIGHVNRAFRRYLQQTPTEYLNQLKLSAARNLLLTTELRVVEIALECGF 252 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 + S F FKK P R+ Sbjct: 253 ENVSHFYHQFKKWYHQAPLDLRRN 276 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 17/256 (6%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR---- 90 +++ H H+ YE ++ G + K GD + H + + Sbjct: 27 NMNVKHFHNQYEIFYIIEGERQFFFDNKSYNAYAGDIAILDTNLVHTTCSISDEDKGYNR 86 Query: 91 -ILNVGISKR-FFEQHY--LPLLPYCFVASQVYRTNN----AFLTYVETVISSLNFRETG 142 IL + K F++ Y L L+ Y +Y N AFL + L + +G Sbjct: 87 VILYIDYEKMCDFDKKYPGLNLVNYFHNNYGIYHLNEDQRIAFLNLYRDLRHELTKKNSG 146 Query: 143 LEELVEMVTFYVINRLRHYREEQ-----VIDDVPQWLKSTVEKMHDKEQFSESALENMVA 197 + VE+ T Y + +L + + VI+ + S + + E AL+ + Sbjct: 147 YQSRVEIATIYWLYKLLSLKHDSTQIHAVINSPKELSASNISAYLEANYTKELALDTISD 206 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S+ Y+ R + Y G T + +N +RI A + LE +N S++D+A E G+ S S F Sbjct: 207 ELFMSKYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSNLSISDVAAELGFESASYFE 266 Query: 258 KTFKKLTSFTPKSYRK 273 + FKK+ + TP YRK Sbjct: 267 RIFKKIMTVTPLKYRK 282 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 116/283 (40%), Gaps = 20/283 (7%) Query: 15 REQQLFNGKN-FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 + + F G N F V ++ K H H+++E V G ++G++++L+ GD +F Sbjct: 41 KAEMFFRGDNRFSVILHPKLAIAQRYHTHEFFEIIYVYAGSCTTTVDGEQMVLKAGDLLF 100 Query: 74 IPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVY--------- 119 + + + H + + N+ I F EQ LL F +Y Sbjct: 101 LNIQTGHVISVDSWDDIVFNILIKPDFLEQSLFHLLSENDVFLNFYLESLYNRTMSEKYL 160 Query: 120 ---RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKS 176 + + + ++ ++ +++E +++ L Q K+ Sbjct: 161 LFQENTDEIASTADRIVIEYLRQDPFAMKVIEAQFVTLVSLLARENRRQAPTGETIPGKA 220 Query: 177 TVEKMHD--KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 V ++ ++ + L++ + YL+ + Y GK ++II + +I A++ L Sbjct: 221 FVPEILQWLSNHYAGATLKSTAEHFHYTTSYLSFLIKEYTGKNFLRIIQDFKIREAERYL 280 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + T+ SV I+ + GY + F + FK T TP YR+ E Sbjct: 281 KETSLSVERISDQLGYKDAAYFCRVFKNTTGATPSEYRRSQQE 323 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 97/275 (35%), Gaps = 10/275 (3%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISG-LHQHDYYEFTLVLTGRYFQEINGKRVL 65 N T+ + + E S H H + E VL+G + + Sbjct: 3 NIRHTFTSPLRHDHTCHLLYSTYSKYEEDWSSYPHTHYFTELFFVLSGSGSFLVEDETFP 62 Query: 66 LERGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA 124 + + D + I H + +G+ F ++ + Sbjct: 63 IAKHDLIVINPNITHTEKSSLEDPLEYIVLGVDGLNFVID----DANEYLLFHSDEMKDR 118 Query: 125 FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQV----IDDVPQWLKSTVEK 180 Y T++ + E++ + + ++ L Y V + S ++ Sbjct: 119 LDFYFRTILEETENSQKDYEKVCQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKR 178 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 D L+ + ++ ++ Y + YG +PM + + RI +++ L T+ S Sbjct: 179 YIDSSFRENITLDKLAEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMS 238 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + IA + G+SS S F + F+K TP +YRK+ Sbjct: 239 LAQIAQQCGFSSSSYFTQCFRKSCGMTPTAYRKQF 273 >UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z0_9FIRM Length = 302 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 106/254 (41%), Gaps = 17/254 (6%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNV 94 + H HD E+ ++TG+ +NGKR++L GD + + H + +E L + Sbjct: 39 CAPCHWHDDIEWIYIITGKMRYYVNGKRLILNEGDSLMVNARQMHYGYAFEQQDCYFLCI 98 Query: 95 GISKRFF-------EQHYLPLLPYCFVASQVYRTNNA----FLTYVETVISSLNFRETGL 143 F E+++LP + + +N+ Y++ V+ ++G Sbjct: 99 LFHPSLFGNNQILQEKYFLPFFENTSLEFHHFYSNDEAGVKVGRYLQEVLLLKEDSDSGY 158 Query: 144 EE-----LVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVAL 198 E ++E+ +F + L + + + ++ + + + +L ++ A Sbjct: 159 ELGVISCMLELWSFLIRTDLLSAAKNKSESEQELNIQKDMVSFIYQHYPEKISLTDIAAA 218 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + + + Y ++P+ +N R+ + + L T S+T+IA G++ S F K Sbjct: 219 GHVGRSKCCQIFKHYMQQSPVDFLNTYRLKISCRLLCTTQKSITEIAILCGFNHLSYFSK 278 Query: 259 TFKKLTSFTPKSYR 272 F + TP+ YR Sbjct: 279 YFMECYGCTPREYR 292 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 100/286 (34%), Gaps = 22/286 (7%) Query: 15 REQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 RE F Y+ + H H+ E + +G + GKR + G Sbjct: 15 REVCPHGTIEFPCAGYDSVYSSHAINRIPWHWHEELEVIFLPSGTLDVRVPGKRFRMNAG 74 Query: 70 DFVFIPLGSHHQSFYEFGA--------TRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 D + I H++ T +++ S F++++ PL+ C + ++ Sbjct: 75 DCLVINSNILHEAETSNECRLHSLVFHTDLISGSDSSVFYKKYMYPLISSCTLDCVLFSA 134 Query: 122 NN----AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID-----DVPQ 172 + + +L G E V + L + + ++ D D Sbjct: 135 EDTSGVSIRQCFMMAFDALANNREGYEFTVRECLSRLCFLLCTFYKPEISDTSAKPDQDS 194 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 + + M L ++ + + R R G +PMQ + R++ Sbjct: 195 FRIKEMIHMIQSRYAEPLKLCDIAQAANIGERECLRCFHRTLGISPMQYLIRYRLSKGAL 254 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 L TN S+ +I+ G+ SPS F TFK+ +P+ YRK Sbjct: 255 LLINTNKSIAEISTRCGFDSPSNFSLTFKRKYQCSPREYRKNNKTL 300 >UniRef50_Q5WL40 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL40_BACSK Length = 323 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 110/282 (39%), Gaps = 26/282 (9%) Query: 16 EQQLFNGKNFHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 E F + I T I H+HDY E V G Q I + V L++G+ V + Sbjct: 38 EANKFLAPGTEIMIRKHTRFIDFPPHRHDYIEMNYVYNGSLKQTIGDRAVELQKGELVVL 97 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVY---------- 119 H+ I+N I FF + L Y F+ ++ Sbjct: 98 NQHIEHEIEACGTEDIIINFIIQPSFF-NYIFSFLNVEGPFYSFLIDSIHGSEPLGQFLY 156 Query: 120 -------RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ 172 VE ++ + + ++ V M+ + + +Q + Q Sbjct: 157 FKCAKEASVQQLLRKMVEEMMEPDAYSQASIKLYVGMLMIELAKKANTLDGKQKLSLHNQ 216 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 W++ T + EQ+ ++L + + L++ ++ GKT ++ E R++ AK+ Sbjct: 217 WIRQTFAYI--DEQYKHASLYELAKRLNQPHYLLSKVIKKQTGKTFKALLQERRLDIAKE 274 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L ++ V+ IA E GY + S F + FKK TP YRKK Sbjct: 275 LLVQSDLPVSVIAQEIGYDNFSYFYQIFKKHFHTTPLVYRKK 316 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 106/266 (39%), Gaps = 16/266 (6%) Query: 23 KNFHVFIYNKTE--SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 K++ + + + H H YYE +L+G IN L GDFV IP + H Sbjct: 11 KDYKIDFAERDADFHMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMH 70 Query: 81 QSFYEFGAT-----RILNVGISKRFFEQHYLPLLPYCFVASQVYRTN-------NAFLTY 128 + Y+ +T + + F +L + F ++ T+ F T Sbjct: 71 RFVYDCNSTVKRYNLFFTMDFAASLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTL 130 Query: 129 VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFS 188 + + + + + + ++ ++ R R + + Q +D ++++ + Sbjct: 131 YQETVGQDSCSQAVIPAYISLILSLLV-RNRDHIQLQDLDSAENAIQASARYI-STHFQE 188 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 +L + S Y ++ ++ G + + + R+ A + L T+ +VT+IA Sbjct: 189 PVSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRC 248 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 G++ + F F+K +P YRK+ Sbjct: 249 GFNDGNYFGDAFRKEFGLSPLQYRKR 274 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 105/285 (36%), Gaps = 26/285 (9%) Query: 17 QQLFNGKNFHVF-----IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 ++ +F I N G H H EFT +L+G + N + L++ GD Sbjct: 16 REYARNNDFPFRVDYEEITNYIGYSFGCHWHPEVEFTYILSGSMIYQANNTQHLVKAGDV 75 Query: 72 VFIPLGSHHQSFYE-FGATRILNVGISK--------RFFEQHYLPLLPYCFVASQVY--- 119 +F+ H + R + + FE Y+ + VY Sbjct: 76 IFVNQNCLHSGKASNDCSCRYFAITFNPTLISGYKSSIFENKYIGEIINSDRIPFVYFEG 135 Query: 120 --RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQW---- 173 + N ++ + + + G E L+E F + L +V D++ + Sbjct: 136 SKKENEQIVSLLMRLEELYREKAEGYELLIESKLFELWFYLYRDVYCKVPDELIKQTKNI 195 Query: 174 --LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 +K+ ++ +HD + L+++ S+ R ++ TP + RI + Sbjct: 196 MQIKAALDYIHDNYK-ENLTLDDISEACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQRSI 254 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 L ++T+ A G+SS S + + FKK TP Y+ + Sbjct: 255 PYLLSEGMNITEAALSVGFSSSSYYSEIFKKYMKCTPTEYKNNVA 299 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 113/277 (40%), Gaps = 16/277 (5%) Query: 20 FNGKNFHVFIYNKTESISGLHQ----HDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 F+ NF + K++ + H H + E + G ++ V ++ D + I Sbjct: 13 FSDFNFELLYITKSKFENDWHSTAHIHPFMEIFFITEGNGSFQLEDSTVNVKEYDLIIIN 72 Query: 76 LGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS--------QVYRTNNAFLT 127 H + + + + F ++ L F S + + ++ L Sbjct: 73 PNCLHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHVINLKKNSSIILN 132 Query: 128 YVETVISSLNFRETGLEELVE-MVTFYVINRLRHYREEQVIDDVPQWLK---STVEKMHD 183 + +I + + E + M++ +++N LR ++ + + L + ++ D Sbjct: 133 QLNLIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKNLNLECAKIKNYLD 192 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 LE + LS ++ L A + G +P+ + E RI AK LE TNYS+ D Sbjct: 193 SHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEAKSLLETTNYSIKD 252 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 I G+S+ S F + FKK T+ +PK Y+ + + + Sbjct: 253 IGSIVGFSNSSYFSQMFKKQTNLSPKQYKVNMIKNPK 289 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 107/272 (39%), Gaps = 23/272 (8%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGAT 89 E I LH H+++E ++ G I+ + GD +F+P G+ H + G Sbjct: 31 KPGELILYLHWHEHFEIIVMQQGSAVFHIDSESYEAHPGDVLFVPAGALHVGYSLCEGDL 90 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVY----------RTNNA---FLTYVETVISSL 136 L + + F+ L +V + R + + + +E S Sbjct: 91 SYLAIVYNSSLFQNWMQDSLHTKYVLPYLEGRVQLPVKPTRLDPSCADYYYLLEQANSEF 150 Query: 137 NFRETGLEELVEMVTFYVINRLR-----HYREEQVIDDV---PQWLKSTVEKMHDKEQFS 188 ++ + +V+ ++ L H EQ + + K+ +E + + Sbjct: 151 KAKQPAYQLMVKSQLHMLLTLLSRKFLPHQLPEQATNQYVHNREQFKALIEYI-EANFAD 209 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 + + + + + + ++ G+T + +N R+N A++ L + S+T+IA Sbjct: 210 KQTVADAARRMNLNVHHFCKMFKKLTGRTFIDYVNVCRVNEAERLLLAGDLSITEIAGCV 269 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 G + + F K +KK P RK+LT+ N+ Sbjct: 270 GCDNSNYFTKMYKKYKGVAPSQLRKQLTDTNK 301 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 101/299 (33%), Gaps = 26/299 (8%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRY 55 M Q +I ++ +LF F + H H+ E V +G Sbjct: 1 MEQQIIEIIVDENKQQLELFGTPMFPCKACYSDINKFVTGDISWHWHEEIEVIRVKSGSI 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYLPLLPYCFV 114 ++ +L GD VFI H ILN + +K + FV Sbjct: 61 HLYLDNSDFVLNEGDGVFINSNILHYIRAGTSEECILNSLVFNKNLISGGVQSVFEQNFV 120 Query: 115 ASQVYRTN-------------NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLR-- 159 V N ++ S E G E LV ++ + Sbjct: 121 NPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEFGYEILVREYLSHIWYIMLKN 180 Query: 160 ----HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 + + D + +K+ + +H + L ++ + S+ R + G Sbjct: 181 IQDLNLNKNNRNDLNSERIKNILSFVHKNYN-KQITLNDIAKVVNLSERECLRCFKNTLG 239 Query: 216 KTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +P+Q I + R++ A K L +T I+ G+ SPS F K FK+ TP YR K Sbjct: 240 ISPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSPSYFSKIFKRFIGITPTQYRNK 298 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 110/278 (39%), Gaps = 26/278 (9%) Query: 25 FHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 FH+ Y K ++ LH+H++ E + G E G + GD I G H Sbjct: 18 FHIEPYELKQGTMIPLHRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYT 77 Query: 84 YE-FGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNNAFLT---------- 127 E ++NV E+ L + R++ +F Sbjct: 78 VEQSEGMEVVNVLFVPALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMM 137 Query: 128 ----YVETVISSLNFRETGLEELVE---MVTFYVINRLRHYREEQVIDDVPQ--WLKSTV 178 +E ++ +E+G + L++ + F +++R+ + + + + + Sbjct: 138 DIRGILEQLMKEYGNKESGYQFLIKSKLIELFIILSRIYANNRNHSLPSIQNDGEMIARI 197 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + Q +LE + ++ SQ T ++ G + ++ N+ RI AK+ L ++ Sbjct: 198 CEFIKRHQAHPLSLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASS 257 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + IA + GY S F FKKLT TP YRK++ Sbjct: 258 DKIARIALDTGYEDLSHFNHVFKKLTGETPSLYRKRMK 295 >UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZFS6_EUBR3 Length = 293 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 99/254 (38%), Gaps = 18/254 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA-----TRILNV 94 H HD E TL+ G +I+ + GD +FIP H T + ++ Sbjct: 41 HWHDEAELTLITKGSCTYQIDLLEYEAKEGDIIFIPPLLLHSISIRDCDEFYSETYVFHI 100 Query: 95 GI----SKRFFEQHYL-PLLPYCFVASQVYRTNNAFLT----YVETVISSLNFRETGLEE 145 + YL PL+ + F + + + + + + +E E Sbjct: 101 NFLGGNNTDICSSRYLTPLINHEFAMPYLIAPKHPAYSSLCKCFMRITNLYSRQEFAYEL 160 Query: 146 LVEMVTFYVINRLRHYREEQV---IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 ++ I L Y E+ ++ LK+ ++ + D + + L S Sbjct: 161 ALKAFLLQAIFLLLQYSEKNADFGVNTSSDKLKNVLDYI-DVHYAESIQVAELAGLCYFS 219 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + + R +++ T +Q IN +R+ + +Q E N S+ D++ G+ + S F + FKK Sbjct: 220 EYHFMRFFKKHMNMTCVQYINNVRLEKSVEQFERGNTSILDVSLSVGFHNLSYFHRAFKK 279 Query: 263 LTSFTPKSYRKKLT 276 TP S+ K L Sbjct: 280 RYHMTPLSFIKSLE 293 >UniRef50_C0E8H9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8H9_9CLOT Length = 358 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 103/258 (39%), Gaps = 20/258 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 H HD+YE V G++ E N R+ ++ + + + H + + + N+ + K Sbjct: 95 HYHDFYELAFVYRGKFINEFPNHDRIEIDESSLILLNPYAVHLPYTQTPDDIVFNILLRK 154 Query: 99 RFFEQHYLPLLP-----YCFVASQVY-----------RTNNAFLTYVETVISSLNFRETG 142 F E + ++ + F +Y + N + ++I L R+ Sbjct: 155 SFVENKLVNMISDNKIFFNFFLDSIYGNEHITNFLVFKNNQEVSNLILSLIMELCDRQLY 214 Query: 143 LEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK---MHDKEQFSESALENMVALS 199 E++V + L +++ + + K+ + + +S +L + Sbjct: 215 FEQVVNSYLVALFAILVRIHQQEFSEAMDGLAKNRTIADILSYIRYNYSHVSLAEVAEHF 274 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S Y++R ++ + +I++ R+ A L+ +N S I GYS S F K Sbjct: 275 NYSIGYMSRLIKQETSMSFSEIVSNYRLEIACNYLKNSNISTEKITEIIGYSDTSYFYKA 334 Query: 260 FKKLTSFTPKSYRKKLTE 277 FKK F+P YRK+ + Sbjct: 335 FKKQQGFSPIDYRKRFQK 352 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 21/285 (7%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 + E Q+ + + ++ H HD +E + G + +G V L G Sbjct: 14 KETITYESQMLHYGLYTAGYQRVFQADIPWHWHDEFELGYISGGSVVYQTSGLTVTLHEG 73 Query: 70 DFVFIPLGSHHQSFYEFG--ATRILNVGISKRFFEQHYLPLLPYCFVAS----------Q 117 D +FI G H R+ K F LL +VA Sbjct: 74 DGIFINSGVLHYLHPLEPCREARLQTQFFDKSFLAGSLGSLLDIKYVAPVLDQRQLEAVP 133 Query: 118 VYRTN---NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY--REEQVIDDVPQ 172 +YR++ FL ++ + + +E E + + + + + ++E + + Sbjct: 134 LYRSDPESKGFLECLQKGVELCSRKEEFFELRLRNLFSELWESIYRWAAQKESSTPSLRR 193 Query: 173 WLKSTVEKM---HDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 ++ K + + FSE ++ ++ A S+ R Q G TP++ + +R+ Sbjct: 194 SIEDDRIKQMMRYVQAHFSEKISVSSIAASIPISERECYRLFQNSMGITPIEYLISVRLQ 253 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 A+ L TN S+ DIA E G+ S S F K F+ TP YR Sbjct: 254 NAQSLLMNTNKSILDIALETGFGSSSYFGKIFRSHHRLTPAQYRN 298 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 114/291 (39%), Gaps = 22/291 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFI-----YNKTESISGLHQHDYYEFTLVLTGRYFQEI 59 +IN + A E ++ ++I N + + H H+ E V+ G I Sbjct: 1 MINTDIMQDASEIVHYDNPGVPLYIRTGILSNYPDMKALCHWHEDIELIYVIEGEMNYRI 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGI-------SKRFFEQHYLPLLPY 111 N + +LL+ D + + H + R + + S + ++ + P + Sbjct: 61 NDRDILLKEKDCLVVNSRQLHYGYAHLRRECRFICILFHPGLLNASPKIYQYYVAPFIEN 120 Query: 112 CFVASQVYRTNNAFLTYVETVISS---LNFRETGLEELVEMVTFYVINRLRHYREEQVID 168 +A Y ++A V+ +++ L E EL + T Y++ R+ + + +++ Sbjct: 121 KNIAYFHYAADSANHEQVQALLNRILLLKTEEKDAYELEAISTLYLLWRILFLQHKSLLE 180 Query: 169 DVPQW------LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 P + L+ + + L+ + A S+ +RY ++P+ Sbjct: 181 QEPAYDYSDLTLQKKMVSYIYEHYQDTLTLDAIAASGNISRSKCCIIFKRYLRQSPIDFA 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 N+ R+ ++ L T S+ IA G++ S F K F + TP YRK Sbjct: 241 NKYRLEVSRYLLANTRSSIAQIAVSCGFNHLSYFSKLFCREYGCTPTEYRK 291 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 108/286 (37%), Gaps = 25/286 (8%) Query: 13 TAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFV 72 Q F FH+ + + LH HD E + G I + V E GD + Sbjct: 11 VPHRDQDFPFDVFHI--IPPGKEVLHLHWHDDLELIYFIRGNATFYIGSETVKPEPGDLM 68 Query: 73 FIPLGSHHQSFYEFG-ATRILNVGISKRFFEQH------------YLPLLPYCFVASQVY 119 F+ G H F + + E Y + + V Sbjct: 69 FVNKGMIHTGFADDEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRFFPILLPVT 128 Query: 120 RTNNAFLT-YVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE--------EQVIDDV 170 N+ + V+ +I+ + G + ++ + ++ L + + V ++ Sbjct: 129 DAYNSLIAGIVKQMIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPTGSADTVGAEL 188 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 K + + ++ + ++ + S+ + R ++ GKT ++ +N +RIN A Sbjct: 189 TDRFKELIAFV-ERHYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVNLLRINAA 247 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 ++ L ++ +T+IAF+ G+ S + F + F++ +P RK+ Sbjct: 248 EQLLIHSSDPITEIAFKVGFGSVNYFSQMFRQYKRHSPSQCRKRYA 293 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 17/271 (6%) Query: 23 KNFHVFIYNKTESISGL--HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 ++FH + L H HD YE +L+G I + ++ G V I H Sbjct: 13 RSFHFSAREVFGHYTMLSNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVH 72 Query: 81 QSFYEFGATRI-LNVGISKRFFEQ--HYLPLLPYCFVASQ-----VYRTNNAFLTYVETV 132 ++ + + + SK + + + LL F+ + + ++ + Sbjct: 73 RTTDADTQDHVRVLLNFSKDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLLDKM 132 Query: 133 ISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID------DVPQWLKSTVEKMHDKEQ 186 I + + TG + ++ + ++ Y E D V + + V+ ++ Q Sbjct: 133 IHEIEHQSTGFQVALQALLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINTNYQ 192 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + L ++ SQ YL+R ++ G T ++ IN IRI A++ L TN+ V DI+ Sbjct: 193 -TPLTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISE 251 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 G+ S S F + FK++T F+P +YR+ TE Sbjct: 252 AVGFGSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_C0FW59 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0FW59_9FIRM Length = 292 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 105/274 (38%), Gaps = 18/274 (6%) Query: 17 QQLFNGKNFHVFIYNK-TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 +Q ++F ++ YN+ +H HDYYEF L G I G++ L+ GD V IP Sbjct: 12 RQYMLSRDFEIYYYNEPASEKVSIHSHDYYEFYFFLEGDVSIWIEGEQYPLKYGDMVLIP 71 Query: 76 LGSHHQSFYEFGAT--RILNVGISKRFFEQHY-----------LPLLPYCFVASQVYRTN 122 G H + R IS + Q L+ ++ T Sbjct: 72 PGIKHMAMVHGNEIPYRRFVFWISVEYCNQLMEVSSSYGYLMQNVLVKKKYIFHNDLITF 131 Query: 123 NAFLTYVETVISSLNFRETGLEELVEMVTFYV---INRLRHYREEQVIDDVPQWLKSTVE 179 N + +I + G E V + + +NR+ + ++ + Q L + Sbjct: 132 NTIQYRIFQLIEEIKSERFGKEAKVSLCVNDLVLQLNRIVYEQQNPKSEKEEQNLYQNII 191 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 D E +LE + S+ ++ + G + Q I + R+ +K + Sbjct: 192 YYIDDHLDEELSLEQLAGQFFVSKYHIAHIFKEQMGLSVHQYILKKRMQASKAAIL-GET 250 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 S+TD+ G+ S F + FKK +PK Y++ Sbjct: 251 SITDVYTMFGFKDYSSFYRAFKKEFGVSPKEYKE 284 >UniRef50_C0EIV3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIV3_9CLOT Length = 307 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 11/260 (4%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 N+ ++ + H H+ E L+ TG +N + ++GD + G H S Sbjct: 12 SNYSLWHSTYQDISFLAHWHNEIELILLRTGSSSISVNDRTFEAQQGDLIICNSGDIHYS 71 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS----QVYRTNNAFLTYVETVISSLNF 138 I + Q+Y LL + Q +R +ET+ + L+ Sbjct: 72 DAANQQNTIDFIVFDPALLGQNYPSLLCPQHLIPGGFLQEHRLIAPLDHLIETIDAELDE 131 Query: 139 RETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDK------EQFSE-SA 191 ++ +E++ RLR ++ D Q +S + E FSE Sbjct: 132 KQLYYQEIITAALREFWFRLRRCIPDEPSDVHLQGQRSEFLYAFHQLLGFLEEHFSEDIP 191 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 LE ++ S Y ++ +R G + +N +RI A L+ ++ + DIA + G+ Sbjct: 192 LETAASMIGYSTGYFSKTFKRLIGINYITYLNMLRIEHAVSCLQSSSDKIIDIALQCGFH 251 Query: 252 SPSLFIKTFKKLTSFTPKSY 271 + F +TF+++T ++P + Sbjct: 252 NIRTFNRTFREITGYSPTEF 271 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 94/252 (37%), Gaps = 17/252 (6%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-RILNVGIS 97 LH H+ E ++ G+ +N + GD VF+ G H + + N+ Sbjct: 38 LHWHNEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFK 97 Query: 98 KRFFEQHYLPLLPYCFV-------------ASQVYRTNNAFLTYVETVISSLNFRETGLE 144 + L F+ + + +++ + + + + R + Sbjct: 98 SSLLKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQ 157 Query: 145 ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSE-SALENMVALSAK 201 V+ F + L I + + ++ + + E F + ++E + Sbjct: 158 LAVKSYLFQIFYLLISNCGLNQIKPISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFY 217 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S+ Y + + G + +Q +N+ R+ A K L T+ + +IA G+ + S F + FK Sbjct: 218 SKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFK 277 Query: 262 KLTSFTPKSYRK 273 K TP YRK Sbjct: 278 KKYGITPGKYRK 289 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 96/287 (33%), Gaps = 28/287 (9%) Query: 16 EQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 E F ++ T S H H E +L G ++N L +GD Sbjct: 13 ELNPHGNYGFPFYLIYVTLSAYQFGRFNCHWHPELEIACILEGTMTYQVNQNLYQLGKGD 72 Query: 71 FVFIPLGSHHQ-SFYEFGATRILNVGISKRFF---------EQHYLPLLPYCFVASQVYR 120 +F+ + H +E + + + + PLL S V+R Sbjct: 73 CLFVNSNALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPLLNTDNFTSFVFR 132 Query: 121 T----NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDD------- 169 N F ++ + + E ++ + L + + Sbjct: 133 DGADGNETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQRSQLPSGAGLAEA 192 Query: 170 -VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 LK+ + +H L+ M S+ R ++ +TP + + RI Sbjct: 193 KQISRLKNAIIFIHSSYT-DPITLDQMAESCHTSKSEFCRIFKKTLHQTPFEYLLRYRIQ 251 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + L S+T+IA + G+S S + + F+K +P+ Y+K L Sbjct: 252 KSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKKNL 298 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 20/265 (7%) Query: 29 IYNKTESIS---GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 ++NKT+S H H+++E +V G I+ L GD V +P S H S + Sbjct: 19 VHNKTKSCDDELPHHLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSIHCSLLD 78 Query: 86 FGATRILN-VGISKRFFEQHY---LPLLPYCFVASQ--------VYRTNNAFLT-YVETV 132 G T + + L F ++ + R AFL + + Sbjct: 79 KGKTVTTSALYFCPSLLASMIGSESDSLHSLFTTAKTTKQYRYYMEREKQAFLAGLFDEI 138 Query: 133 ISSLNFRETGLEELVEMVTFYVI---NRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSE 189 + E V ++ Y I +R +E++ VP W+K ++ + D E Sbjct: 139 AKETAIADLYSGETVALLIRYAIVFVSRNCGTAQEKLSPLVPAWIKESLAYI-DAHLHEE 197 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 L+ + A + Y ++ + G T ++ + R+ AK L+ T+ S+ IA G Sbjct: 198 LDLKMLAAHACVHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDLSIQAIAEACG 257 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKK 274 Y S F +TF+ T TP +YRK Sbjct: 258 YHSMPHFYRTFRAATGTTPAAYRKN 282 >UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGE3_9CLOT Length = 371 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 100/255 (39%), Gaps = 19/255 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H+++E V +G + +G+ L +G H + ++N+ + K Sbjct: 108 LHTHEFFELIYVYSGTCYCNFSGEEFCLSKGTIWIFNTQCAHSVVIPDDGSTLVNILLRK 167 Query: 99 RFFEQHYLPLLPYC-----FVASQVYRTN-------------NAFLTYVETVISSLNFRE 140 F L ++ F +Y N + Y+ +I + Sbjct: 168 STFSSAILNMIQDNDLFLDFFLKSIYDANTQPHHMQFQAQPGSEIEFYIFKIILEYANQS 227 Query: 141 TGLEELVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 + +++++ ++ L R Y+ +D + + + +++ L++ Sbjct: 228 NYRQSIMKLMLSTLLTELARDYQLRSETEDKTASIDILNIIAYISDHYTDVTLKSTAEHF 287 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S +Y+++ +Y G + ++ + +++ A+ L T + +A GYS S F + Sbjct: 288 HYSPDYISKCIYKYTGYSFLEYMKRYKLSKAEYLLLHTKLPLEQVASMVGYSQRSSFDRE 347 Query: 260 FKKLTSFTPKSYRKK 274 FKK S TP YR + Sbjct: 348 FKKHYSLTPSRYRSQ 362 >UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP2_9CLOT Length = 327 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 114/293 (38%), Gaps = 20/293 (6%) Query: 5 VINAPEIATAREQQLFNGKNFHVFI--YNKTESISGLHQHDYYEFTLVLTGRYFQEINGK 62 +++A +I E+ N + + H+H ++EF V +G++ ++ + Sbjct: 34 IVSADDIFAPHEEVAINVHHLPSWYGAPQPNTHPMKPHKHIFFEFVYVYSGQFHSVVDSE 93 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQ 117 ++L + + + H + E + +LN+ I + ++ + L+ + F + Sbjct: 94 SLVLGQDQVILLNPNQVHAPYIERDSDLVLNILIKQPLIDRTFASLISRDNILFDFFYNY 153 Query: 118 VYRTNNA-----------FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQV 166 +Y + A + +++ R E+ + + L E+ Sbjct: 154 IYGISGASNYLMVDRTPRVDQIISSIVEEYCERRPLFEQSLIGWIINLFTELARVYSERK 213 Query: 167 IDDVPQWLKSTVEKMH--DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + + K + ++ +E ++ L + S YL+ ++ G+T +I+ + Sbjct: 214 TNQPARPAKPGMAEIIGFIRENYATVTLSETAKTFSYSPSYLSYLIKKETGQTFKEIVRD 273 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 RI A L+ T ++ I+ G+ K FK+ +P YRK+ + Sbjct: 274 FRIESACNFLKNTQLTLEQISEILGFQDSFYIAKVFKQRYGISPSEYRKRSRQ 326 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 34/262 (12%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA------ 88 + H HD YE + +G ++ + G V IP G H++ Y Sbjct: 21 RMDETHSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQR 80 Query: 89 ---------TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFR 139 T L + K F + + + + + + Y+E +I+ + + Sbjct: 81 TALRFSIKDTDWLCSALGKDFVKDN---------LTAGIIEVPDKRKEYIENLITRMIYE 131 Query: 140 ETGLEELV---------EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSES 190 +EL E + F + +L ID ++ +++ + Sbjct: 132 NQMPDELSMGMVKTLFQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNNYD-KQI 190 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L+++ + S+ YL++ ++ G + + +RI A + L TN+S+TDIAF G+ Sbjct: 191 YLDDVAKQFSISRSYLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGF 250 Query: 251 SSPSLFIKTFKKLTSFTPKSYR 272 + + F F+++ +P YR Sbjct: 251 NDSNYFGDAFRRIKGISPNKYR 272 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 21/260 (8%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 LH H+ E TL+ +G + +I+ + +E+GD + I H + G + + + + Sbjct: 9 SLHWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSMVSDSLVF 68 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE--------------TVISSLNFRETGL 143 F + +P + V FL V+ +++ N ++ G Sbjct: 69 HLDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECFNGKQYGY 128 Query: 144 EELVEMVTFYVINRLRHY----REEQVIDD--VPQWLKSTVEKMHDKEQFSESALENMVA 197 E + + + L Y + E + + LK + + +E + + Sbjct: 129 ELYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSN-YRETLTIEELSS 187 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 + SQ + +RY G T M+ IN RI A L T V DIA E G+ + S F Sbjct: 188 VCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFRNISYFN 247 Query: 258 KTFKKLTSFTPKSYRKKLTE 277 K FK+ TP SYRK E Sbjct: 248 KVFKERFGVTPGSYRKNSRE 267 >UniRef50_C0EDI9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI9_9CLOT Length = 369 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 24/261 (9%) Query: 39 LHQHDYYEFTLVLTGRYFQEIN-GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 H HD++E V TG EI+ ++V L++ + + + H+ + I N+ +S Sbjct: 111 FHFHDFFELIYVHTGSLRNEIDYTEQVQLDKNHVLLLNPNARHRLLCDDPQAVIFNLMLS 170 Query: 98 KRFFEQHYLPL-----LPYCFVASQVYRTNN-----------AFLTYVETVISSLNFRET 141 + F E L L L + F + +Y + A ++ +I R+ Sbjct: 171 RSFVEHTLLSLFDEDNLIFYFFLNSIYGGDRIRSFLYLPLNPAVEQRIQCIIKEHCDRQP 230 Query: 142 GLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-----HDKEQFSESALENMV 196 ++++ + +E++ DV L + + + + F+ + L + Sbjct: 231 LCQQMIAANLLMLFGEFARLHKEEL--DVESELLAQSSDIGDILRYLRLNFATATLASTA 288 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 S+ Y +R +R GK ++++EIR+ A L+ ++ V I+ GY +P+ F Sbjct: 289 RKFNYSESYFSRMIKRQTGKRFTELLSEIRLETACNYLKNSDLPVEKISEIIGYQNPANF 348 Query: 257 IKTFKKLTSFTPKSYRKKLTE 277 + FKK + +PK +R++ E Sbjct: 349 FRLFKKHLATSPKDFRRQYRE 369 >UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAQ5_9CLOT Length = 329 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 22/268 (8%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 K + H HDYYE V G + V+L +GD + + H + Sbjct: 60 KQKRPPLFHNHDYYEMVYVYRGGCVNNFRDQEVILSQGDVLLMNPNVLHSIHTLREEDCV 119 Query: 92 LNVGISKRFFEQHYLPLLP-----YCFVASQVYRTN--NAFL-------TYVETVISSLN 137 N+ +S+ FE+ L LL F+ S +Y+ N FL V+ ++++L Sbjct: 120 FNIMLSRSLFEESMLLLLSDNKLLSNFIVSYLYQINTSQEFLYFPSPKNEQVDDIVTNLI 179 Query: 138 FR-----ETGLEELVEMVTFYVINRLRHY--REEQVIDDVPQWLKSTVEKM-HDKEQFSE 189 + TG +V+ + + + L + Q+ D+ L ++ + + + Sbjct: 180 YEFSDRGPTGSASVVQHLLAVLFSLLARIYAEQNQIHTDMHTKLSPLLDIISYINQNSRT 239 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +L + + S Y++R +++ G++ Q++ ++ A++ L+ T SV +A EAG Sbjct: 240 VSLAVLEEKFSYSAGYISRLIKQHCGQSFTQLVQNAKLQRAREILKNTGTSVVQVAEEAG 299 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + F + FK+ TP YRK E Sbjct: 300 FQDSQYFSRLFKEKFGLTPSQYRKLCQE 327 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 115/285 (40%), Gaps = 18/285 (6%) Query: 14 AREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + K+ Y+ +H HD +E V +G I+G+ + + G Sbjct: 5 LKENKPHGTKDDPFSTYHIENAGQSFQIPVHWHDEFEIIYVKSGFLTVNISGENYIGKPG 64 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-------RTN 122 D + G+ H + G ++ + +L + Sbjct: 65 DAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPSVK 124 Query: 123 NAFLTYVETVISSLNFRETGLEELVEMVT---FYVINRLRHYREEQVIDDVPQWLKSTVE 179 + E +I +++ E + ++ + E+ I + ++ VE Sbjct: 125 DTIKELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGRNIVE 184 Query: 180 KM---HDKEQFS-ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 K + ++ F+ + +L+ S++Y++R + ++ T Q + +R+ +AK+ L+ Sbjct: 185 KEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQ 244 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 T+ SVT+ A +GY + S FI++FKK +P YRKK + Q Sbjct: 245 DTDISVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKKQVDCMQ 289 >UniRef50_C0CUZ1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUZ1_9CLOT Length = 312 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 13/277 (4%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 N P + R L + + + + +H H YYE +V G IN L Sbjct: 3 NIPRLTANRI--LSSPSHGYASFITDRRQLVKIHCHSYYEIFIVAQGYGTHLINSTSEPL 60 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFE--QHYLP-------LLPYCFVASQ 117 G F+ H +I+N+ + + F+ YL L P C Q Sbjct: 61 SPGALYFVRPDDVHCYMDVTSNFKIINMIVPEDTFDRLTQYLGGTFRDDLLSPPCPPHVQ 120 Query: 118 VY-RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKS 176 V + + LT +E ++ + + + + F ++ + ++ P+WL+ Sbjct: 121 VSMKEFKSILTELEQLVLTKKILKEKSDVFFRITVFGLLTKYFVLSPQKSSGRTPEWLRW 180 Query: 177 TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 +M KE F E L + LS KS E+L+RA ++Y K+P Q+IN+IR+ + QL+ Sbjct: 181 LSLEMLKKENFVE-GLPALYRLSGKSIEHLSRACRKYLQKSPTQLINDIRLEYVVNQLQN 239 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 T+ V I +AG+ S S F FK+ +P +RK Sbjct: 240 TDEKVIAICEDAGFDSLSHFYHIFKQAYGMSPAQFRK 276 >UniRef50_D1N7W9 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7W9_9BACT Length = 317 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 33/284 (11%) Query: 13 TAREQQLF-NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 R+Q +G N H ++ H H++ E +L+G +NG++ LLE Sbjct: 37 AGRKQSFIPSGGNLHYHSLPSGGTVE--HSHEFGELIFLLSGSIIHRVNGEKQLLEPNSV 94 Query: 72 VFIPLGSHHQSFYEFGATRILN----------VGISKRFFEQHYL-----PLLPYCFVAS 116 VF+ H GA V IS+ + +L +LP F Sbjct: 95 VFVRPDDRHGFLPAPGAPDCELLLLSFHLELFVTISRYLEDDAFLHRYTESVLPAVFRVP 154 Query: 117 Q------VYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV 170 + + + I + F+ L E+ T + + + D Sbjct: 155 ESRMNELSLELLSLNAQGITPAIRKIRFKV----LLAELFTRFFLPQ----EAAPGSSDA 206 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 P+WL+S EKM E F L+ M LS + EYL + +++ ++P + INE+RIN A Sbjct: 207 PEWLESLCEKMKTPENFI-PGLKRMQQLSGYTPEYLCKVFRKHLDRSPTEFINELRINHA 265 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + L + S+ ++A+ + S S F F+K S TP YRK+ Sbjct: 266 ARLLADSGESIAELAYRLNFQSLSRFYHLFRKQYSCTPAEYRKR 309 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 14/252 (5%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 + + + S H H + E V G I + +++ D + + H + Sbjct: 27 HYEEDWPSIPHTHAFTELFYVSEGSGEFLIENQHFSIKKDDLIIVNPHIQHTEISLSASP 86 Query: 90 RILNV----GISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEE 145 GIS F +Q + Y ++ + L Y ++ L+ + G EE Sbjct: 87 LSYYTVGVDGISFSFHDQKEFQIFHY-------HQKHADLLFYFHSLFQELDEKNDGYEE 139 Query: 146 LVEMVTFYVINRLRHY--REEQVIDDV-PQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 + + +I++LR + + Q+ P + V++ D + LE + +LS + Sbjct: 140 ICKHTLAILISQLRRFAVSDFQLFPSFHPSKECALVKRYLDSHYSDDINLEQLASLSHLN 199 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + YL+ RYYG +P+ + RI K LE T++ ++DIA AG+SS S ++F+K Sbjct: 200 KYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAHLAGFSSQSYLAQSFRK 259 Query: 263 LTSFTPKSYRKK 274 T YR+ Sbjct: 260 YCGMTAGEYRRS 271 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 98/277 (35%), Gaps = 18/277 (6%) Query: 16 EQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 E + F +Y T H H E + G + EI K+ L++G+ Sbjct: 14 ELAVHGNYEFPCAVYFSDVSKYTAGEIAWHWHKEIEIITIYKGTLYIEIENKKFTLKKGE 73 Query: 71 FVFIPLGSHH-QSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCFVASQVYRT 121 +FI H RI++ K +Q Y+ L C S + T Sbjct: 74 SLFINSEEMHFMRMDAREECRIISFVFDKVLICGEKGSKIDQKYIIPLINCKELSALELT 133 Query: 122 ----NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST 177 Y L + L E++ V + ++ + Sbjct: 134 EEDSQKLIQGYFSYADEILGYEIVIRNVLSEILLNIVRENQELLEKSNGSNNTDRERMKY 193 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + K + +L ++ + + R R G +P++ + + RI A + L + Sbjct: 194 MLTFIHKNYSEDISLGDIAKEAFIGEREALRCFARTIGTSPIEYLQKYRIYTAAELLRKS 253 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 VT+I +AG++SPS F K F ++ TP+ YRK Sbjct: 254 ELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYRKN 290 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 16/260 (6%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR-ILN 93 S+ H H YEF + +G I ++ GD + + H++ + Sbjct: 31 SMDTTHYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSELSQPNHERIV 90 Query: 94 VGISKRFFEQH--------YLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLE- 144 + FF+ P + + E+++ L G + Sbjct: 91 LHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRELQECPPGYQL 150 Query: 145 ELVEMVTFYVINRLRHYREEQVIDDV---PQWLKSTVEKMHDKEQFSES-ALENMVALSA 200 + M T ++ RH + + + + P K T H + F E L+ + Sbjct: 151 HVRNMATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHFREPLPLDELAKQFF 210 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 S+ +L+R + G Q IN RI A+ L+ T++S+T I+ G+ + S F K F Sbjct: 211 ISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISERCGFENFSHFGKVF 270 Query: 261 KKLTSFTPKSYRKKLTEFNQ 280 K+L+ +P+ YRK E NQ Sbjct: 271 KELSGLSPRDYRK--LEQNQ 288 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 96/269 (35%), Gaps = 16/269 (5%) Query: 27 VFIYNKTESI--SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 FI +TE + LH+HD +E V+ G+ + E GD IP H+ Y Sbjct: 19 FFIDQRTEPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEAGDVALIPPSMLHRWEY 78 Query: 85 ------EFGATRILNVGISKRFFEQHY--LPLLPYCFVASQVYRTNNAFLTYVETVISSL 136 E G R L V E+ P L F VI Sbjct: 79 AADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDALKFGPESVRVIRKT 138 Query: 137 NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD------KEQFSES 190 G++EL + + + + + + P ++ V +M K Sbjct: 139 LSEMNGMDELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQICAYVMKHYVHSI 198 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 AL+++ A ++ +R G T Q + + R+N A L+ + V++I + G+ Sbjct: 199 ALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHSQKGVSEICYLVGF 258 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 + F++ F P YRK+ N Sbjct: 259 NDLPHFVRVFTSTMGMPPSKYRKQFKAGN 287 >UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=Clostridium RepID=A5I5L7_CLOBH Length = 688 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 107/266 (40%), Gaps = 12/266 (4%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 + + + + S +H H+ E VL G I + + + + I H Sbjct: 10 NDLPIKVSMQNIKKSPIHWHNAMEVIYVLEGSIKITIETESHRVNKQEIGIINPEEAHSI 69 Query: 83 FYEFGATRILNVGISKRFFEQHY-----LPLLPYCFVASQVYRTNNAFLTYVETVISSLN 137 ++L I FF ++Y + +Q + + Y+ T++ + Sbjct: 70 KSITNNNKVLIFQIDTSFFNKYYDIENMFFYTDFSAPEAQKHEKYDVLRKYLSTLLCEIA 129 Query: 138 FRETGLEELVEMVTFYVINRL------RHYREEQVIDDVPQWLK-STVEKMHDKEQFSES 190 + E++VE + ++ L Y EE++ ++ Q+ + + K ++ Sbjct: 130 QKGDNYEDVVEEILVDLLYHLINNFHYLIYDEEELKENEVQFERYDRIIKYIYSNYNNKI 189 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +++++ L S YL+ + G + +N R+ A K L T+ ++++I+ E G+ Sbjct: 190 SIQDIARLEFLSSHYLSNEMKNKVGYSFNDFVNLTRVEEAIKLLLDTDKTISEISEELGF 249 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLT 276 S F K FKK TP YRKK Sbjct: 250 SHTRYFNKHFKKHYKCTPMQYRKKYK 275 >UniRef50_C0E9Q1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9Q1_9CLOT Length = 333 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 21/265 (7%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVG 95 I H HD++E V +G++FQEING ++ +G + LG+ H+ + E + N+ Sbjct: 63 IPPEHSHDFFEIIYVYSGQFFQEINGISIVQNKGQSALLNLGAKHKVWVEHSDDIVFNIL 122 Query: 96 ISKRFFEQHYLPLLP-----YCFVASQVYRTN-----------NAFLTYVETVISSLNFR 139 I K EQ +L L+ F + +Y N +I R Sbjct: 123 IRKSMVEQVFLQLISKNNLISSFFLNSLYGMNSKKNLLLFDQMEELDEIFCGIIREYYDR 182 Query: 140 ETGLEELVE---MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALEN 194 + EE + + F + R+ + R +Q +++ + +V KM + + ++ L++ Sbjct: 183 DFLYEENIIGRLVQLFSIWARIYYKRNDQEKNEITEIENDSVIKMLDYIQSHYNTVTLDD 242 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + S+ +++R + + + +I+N+++I A L T V I+ G+ S Sbjct: 243 LANYLGYSRRHVSRLLKMHTNRNLSEIVNDLKIKNACIYLNNTGLPVDKISEIIGFKESS 302 Query: 255 LFIKTFKKLTSFTPKSYRKKLTEFN 279 F K FKK + YR+ L N Sbjct: 303 YFYKIFKKQMGCSISKYRQTLKTGN 327 >UniRef50_C0EHT5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHT5_9CLOT Length = 318 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 115/280 (41%), Gaps = 25/280 (8%) Query: 17 QQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 ++ F V +N + + LHQHD++E V G I+ K+V L +GD I Sbjct: 37 KKAFKSDQIGVLPHNSHGN-TPLHQHDFFEMVYVHEGYCDNMIDNKKVSLTKGDICLINT 95 Query: 77 GSHHQSFYEFGATR-ILNVGISKRFFEQHYLPLLPYC-------FVASQVYRTNNAFLTY 128 + H + I N+ I + LL Y F + + R ++ +L + Sbjct: 96 YAVHTLLCDDPDNAVIFNIMIGAEMMNAAHFRLLSYNDFVADFFFHSLEKQRDDDNYLIF 155 Query: 129 VET------------VISSLNFRETGLEE---LVEMVTFYVINRLRHYREEQVID-DVPQ 172 ++ +I+ E L + ++ + +I R Y++ + Sbjct: 156 HQSEKENAANNLCVQLINEYYGHEEDLYQESKILHLFDCILIELTRSYQKMKDHPLGKKD 215 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 LK + + + ++ L+++ ++ +R + G+T ++ ++R+ AK+ Sbjct: 216 SLKVSDMIYYIENHYNSVTLKSIADYFGYHPKHFSRIIHQATGQTFTDLLLDLRMRCAKE 275 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L+ + S+T+I + GY + F F+K +PK YR Sbjct: 276 LLQNNSLSITEIMHQVGYHNYKWFSNQFQKKFDMSPKKYR 315 >UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9G4_9BACT Length = 261 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 19/245 (7%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 +E + +H H+ E LV+ G + GK + G + +P G H+ T + Sbjct: 14 DSEKPTSVHSHNGTEIILVVHGECVNVLPGKEQHAKAGSVIVVPAGMSHRQLNSGRVTTV 73 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVY---RTNNAFLTYVETVISSLNFR-ETGLEELV 147 + FE CF S + + + E ++S R + + L+ Sbjct: 74 YVI------FEAQ-----QECFDCSARILDVKGDRYAPGWFEQIVSLKTARLDREADRLL 122 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 ++ Y+ R + E + +E+ +++ ++ + S +L Sbjct: 123 GVLLSYLTGRENRLQREGGRSPAAARAMAYLEENYNR----NISVAEVANACGVSPSHLH 178 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 +R + ++P+ +N IR+N A++ L S+ +I F+ G++ P F + F+K+ T Sbjct: 179 LLFRREFSESPLASLNRIRMNRARQLLLNCYLSIGEIGFQCGFNQPHYFCRAFRKIHGCT 238 Query: 268 PKSYR 272 P YR Sbjct: 239 PGEYR 243 >UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8S1Q1_9CLOT Length = 322 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 98/261 (37%), Gaps = 22/261 (8%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVG 95 H H+Y E + G ++G+ + L+ G+ +F+ + + +N Sbjct: 61 HFPEHTHNYVEVIYMCRGETTHVVDGRELKLKEGELLFLNQHAVQEIQPAGQDDIAVNFI 120 Query: 96 ISKRFFEQHYL----------PLLPYCFVASQVYRTNNAFL--------TYVETVISSLN 137 I FF+ + + C Y F VE ++ SL Sbjct: 121 ILPEFFDTAFRMMGEEENLLRDFIVGCLCDDTRYGRYLHFQIADVLPVQNLVENLVWSLM 180 Query: 138 FRETGLEELVEMVTFYVINRLRHY----REEQVIDDVPQWLKSTVEKMHDKEQFSESALE 193 G++ + + ++ L HY R + + + + + E + E +L Sbjct: 181 HEREGMQAMNQTTMGLLLRHLMHYTGRIRVNRDSEQSFEQQLTLQVLRYIDEHYREGSLT 240 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + AL +L+RA R G+ +++ R+N A L T V D++F GY + Sbjct: 241 ELAALMGYDVYWLSRAINRLLGRNYKELLQIKRLNQAAFLLHSTRMPVADVSFAVGYDNT 300 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 S F + F+ +PK YRK Sbjct: 301 SYFYRIFRTYYGMSPKEYRKN 321 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 111/277 (40%), Gaps = 17/277 (6%) Query: 13 TAREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 T +E + K++ Y+ +T +H HD E + G I+ + Sbjct: 4 TLKENRNHGTKDYPYSQYHVFNQQTAFQFPIHWHDELEIIYIRNGSINITIDNELFTGTG 63 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFF----EQHYLPLLPYCFVASQVYRTNN- 123 G F + G H + F + +L +S V T++ Sbjct: 64 GSFFIVNPGELHYMGSNDLNADYYTILFPLEFISFQSNDYVENMLFKPMRSSHVILTHSL 123 Query: 124 -------AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQW-LK 175 ++ +E +I + + + +++ +++ + + V ++ Sbjct: 124 PYSEIYAEIISLLEKLIYINKYEKGFYQLDCKILLLEILSNILSIPDILVKKTSNASDMR 183 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + + + L ++ S++Y++R ++++ T + +N +R+ +AK L+ Sbjct: 184 REIITYVNDNYLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLD 243 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 TN S+TD+A +G+ + S FI++FK+ TP SYR Sbjct: 244 TTNISITDVALSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 96/267 (35%), Gaps = 21/267 (7%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 H+ E+ LH H +EF +L+G I K ++ G+ +FI H + Sbjct: 24 HLNYAEGLENFFYLHWHSEFEFVYILSGAILYSIEDKEYCVKAGEGLFIHSNQLHAARSF 83 Query: 86 FG-ATRILNVGISKRFF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISS 135 G V F + P+L V ++ + V ++S Sbjct: 84 NGMPCEACVVLFHPNLFGHNKQSSTYSKFIYPILEGDLVFENYFKCEEEWQRLVMKLLSE 143 Query: 136 LNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ----------WLKSTVEKMHDKE 185 L+ + E++ I + H + + PQ ++ + +H+ Sbjct: 144 LDDLKYENVSENELLLKSKIFEIWHLCYKNSVALAPQGRKNRNYKLERMQPVLNYIHENY 203 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + E L + + S+ A + +P+ + RI + L T++ + DIA Sbjct: 204 K-EEITLMALAKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQSCTLLTETDWKIADIA 262 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYR 272 G+++ S F + F K +P YR Sbjct: 263 RNVGFNNISYFNREFIKAIGCSPSKYR 289 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 109/282 (38%), Gaps = 20/282 (7%) Query: 15 REQQLFNGKNFHVFIYNKTESISGL---HQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 +E+ + Y I H HD E + +G +N + + ++ GD Sbjct: 2 KERSSHGSFELPIETYTDNCEIFHSLYNHWHDEMELIYIESGSGLVRLNKEILRVKAGDL 61 Query: 72 VFIPLGSHHQSFYEFGATRIL-NVGISKRFF--------EQHYLPLL-----PYCFVASQ 117 + + G H + ++ F ++ + LL + + S+ Sbjct: 62 IIVNRGVLHGIKTDLKNILYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHIISR 121 Query: 118 VYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST 177 + + S ++ ++ + F + D ++ Sbjct: 122 SDDNYGNICLLFDRIHSCHKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDENKSLAS 181 Query: 178 VEKMHDKEQFS---ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 ++K+ D + + ALS S+ Y + ++Y GKT + IN++RI AK L Sbjct: 182 IKKILDYINLNYSQPLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPML 241 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 ++ SVT+IA E G+++ S FIK F++ T +P +R+ L+ Sbjct: 242 LHSDSSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRNLS 283 >UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NB22_9BACT Length = 297 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 97/258 (37%), Gaps = 21/258 (8%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGI 96 + H+HD+ E ++ G Q ++G + GD I H F E ++NV Sbjct: 39 TEPHRHDFAELVIITAGNGVQVVDGGEYAVSLGDVFLIQGNGAHY-FLERNRVSMINVLY 97 Query: 97 SKRFFEQHY-----LPLLPYCFVASQVYRTNNAFLTYVE--------------TVISSLN 137 + LP F R+ F +++ + L Sbjct: 98 DPARLPLPFGWLRRLPGYNVIFELEPSVRSAETFKHHLKLSAAELAEAVEIVGKLERELE 157 Query: 138 FRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLK-STVEKMHDKEQFSESALENMV 196 G E +I + + +++ ++ + + + E E LE + Sbjct: 158 QDTPGAELAAFQRLLELIVFISRCYDAPPAENLAAVMRVGRIISLLESEFMREWRLEELA 217 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 L+A S L R + G +P+ + +R+ A + L+ T +V +IA + G++ + F Sbjct: 218 KLAATSPNNLLRLFRTVTGTSPVDYLIRVRLRRAAEALKNTPGAVAEIAADCGFADSNYF 277 Query: 257 IKTFKKLTSFTPKSYRKK 274 + F+ +P+ +RK+ Sbjct: 278 ARKFRAAYGVSPREFRKR 295 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 104/279 (37%), Gaps = 18/279 (6%) Query: 14 AREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + K+ IY+ +H HD +E V +G I+G+ + + G Sbjct: 18 LKENKPHGTKDNPFSIYHIENAGRSFQIPVHWHDEFEIIYVKSGLLTVSISGESYIGKAG 77 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-------RTN 122 D + G+ H + G ++ +L + R Sbjct: 78 DAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMINPRVK 137 Query: 123 NAFLTYVETVISSLNFRETGLEELVE-------MVTFYVINRLRHYREEQVIDDVPQWLK 175 ++ E +I E + ++ +++ + + ++ Sbjct: 138 DSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDTSGRNIVE 197 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + + + +L+ S++Y++R + ++ T Q I +R+ AK+ L+ Sbjct: 198 KEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAKQLLQ 257 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 T+ SVT+ A ++GY + S FI++FKK +P YR Sbjct: 258 DTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRNS 296 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 5/244 (2%) Query: 34 ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRIL 92 E S LH H Y E V G ++ K ++ D V + H E + Sbjct: 44 EWNSTLHTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLISHTERGIENVNFEYI 103 Query: 93 NVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE-MVT 151 +GI + C +A+ Y + L Y++T++ + ++T + L + ++ Sbjct: 104 VMGIEGVTYFSKEEDEEQGCSIAN-YYEYKHEVLFYLKTILFEVKTKDTEYQSLCQNLLE 162 Query: 152 FYVINRLRHYREEQVIDDVPQWLKS--TVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 +IN +R + + K +EK D + L+ + L+ ++ ++ A Sbjct: 163 VLLINLMRRANINLKSSPINKANKDCVLIEKYIDAHFKEDITLDTLSELTFLNKYHIVHA 222 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 ++Y G +P+ + + R+ AK L TN +++IA+ G++S S F + FKK T +P Sbjct: 223 FKQYKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQSYFAQAFKKATLTSPL 282 Query: 270 SYRK 273 YRK Sbjct: 283 QYRK 286 >UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH72_9FIRM Length = 294 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 108/289 (37%), Gaps = 22/289 (7%) Query: 6 INAPEIATA--REQQLFNGKNFHVFIYNKTESISG----LHQHDYYEFTLVLTGRYFQEI 59 +N+P +A E+ +N F ++I S G H H EF ++ G I Sbjct: 1 MNSPLEVSADFSERLHYNLAGFPLYIKKDKLSRYGYEALCHWHPDLEFIYIIDGAMDYFI 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHY------------L 106 NG R+ + +G +F+ H F + + + + F + Sbjct: 61 NGNRIPIRQGQVIFVNSRRLHYGFSRQKEECTFIALVVHPSLFTNSFDKAWIFAEQKFGF 120 Query: 107 PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR--EE 164 + Y + S + + ++ + +N L+ + H E Sbjct: 121 ANVDYILLDSHISW-QKKMIEGIDRIYREINAASFNPLRLLAEAISICADAGEHIETMES 179 Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 +V Q + + + L+ + A + + ++Y +P+ + + Sbjct: 180 SGKHNVTQMAFLNMTEYIQNNYREKLTLDKIAGAGAVCRSKSCQLFRQYVRMSPVAYLTK 239 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 R++ + + L T SV++IA G+ SPS +I FKK T TP +YRK Sbjct: 240 YRLSKSAELLRDTELSVSEIASLCGFQSPSYYINLFKKETGQTPLNYRK 288 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 109/251 (43%), Gaps = 9/251 (3%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 + + + S +H H + E LV G + L++GDF+ + + H Sbjct: 25 YTKYENDWPSFMHTHPFTELFLVTGGVGEFYVENNIYPLKKGDFILVNPNASHTE-KSDE 83 Query: 88 ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV 147 + + ++ F + F N + Y++++++ + + + Sbjct: 84 KNPLEYIAVAVDNFSLNLTDTNHLMFNC---ISKNPNIIKYMDSMLAEQEGNKAYSDHIC 140 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKST----VEKMHDKEQFSESALENMVALSAKSQ 203 + + ++ + + ID P S ++K D S+ ++++ LS ++ Sbjct: 141 QNILEIILIEILRITKSD-IDTEPTVNASKECFKLKKYMDSNYASKITIDDLAKLSNLNK 199 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 YL + +Y+G +P+ + IRI AK+ LE ++YS++ I+ G+SS S F + F K Sbjct: 200 YYLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQSYFTQCFIKS 259 Query: 264 TSFTPKSYRKK 274 +PK+YR + Sbjct: 260 CGLSPKAYRNR 270 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 28/294 (9%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRYFQEI 59 +++ + +E F + +Y T S + H HD Y+F+ V G + I Sbjct: 8 IVDVKIDRSNQELTNHGDFTFPLAVYKNTLSKNLLGYVIWHWHDEYQFSYVTQGEIYFYI 67 Query: 60 NGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFF--------EQHYLPLLP 110 N + +L+ G +FI G H + + + I K+ F EQ YL L Sbjct: 68 NDQTFILKEGQGIFINTGCMHSIKAVNDPESTYVCINIDKKLFSSFKGSVIEQKYLNTLT 127 Query: 111 YCFV---------ASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLR-H 160 + + + + + YV+ S +F L++ + V N L Sbjct: 128 QSAIFLDLSEEWHIECINKLKDIYQFYVD---KSFSFEIDICINLMQTLALVVKNALNPI 184 Query: 161 YREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 D Q +K + +H + + LE + ++ R +R T + Sbjct: 185 LLTTIESKDEYQKIKKILSFLH-QHYAEKITLEQIAQHIFLNKNECCRLFKRKTKMTIFE 243 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + E R+N + + L ++ S++ IA + G+S+ S +I TF K TP YRK+ Sbjct: 244 YLLEHRLNKSIELLIHSDKSISQIAIDTGFSTVSYYIDTFHKNVGITPNEYRKR 297 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 20/260 (7%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF-------GATR 90 LH H+ YE +V G + I GD I H + + Sbjct: 27 PLHCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCDSLTGKNGSEESA 86 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEM- 149 + S F + + Y +A+ + ++ + + + L++ + Sbjct: 87 CEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRKQVQRLDKGQGIG 146 Query: 150 ---VTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--------HDKEQFSE-SALENMVA 197 +++ L +E +I P + + + + +E F E L+ + Sbjct: 147 RIRWLLALLDTLARSQETSLIASGPVRNGTALRRQETVDTVCRYLREHFRENLCLQAIAR 206 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 + + L R ++ GKT + IRI A + L T S++ IA+E G+++ S F Sbjct: 207 EACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLSISAIAWETGFANLSHFN 266 Query: 258 KTFKKLTSFTPKSYRKKLTE 277 + FK LT TP YRK + Sbjct: 267 RQFKSLTGQTPGEYRKNIRS 286 >UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJC5_9CLOT Length = 309 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 115/293 (39%), Gaps = 34/293 (11%) Query: 14 AREQQLFNGKNFHVFIYNKTES--------ISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 E + K F + +Y T+ LH H+ +FT+V +G+ ++GK Sbjct: 15 LHEINYYTDKGFPIEMYTVTQGNIEPSGRGYMDLHWHEELQFTVVTSGKLKLRVDGKLYT 74 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISK---RFF------EQHYLPLLPYCFVAS 116 L+ G+ +FI H + R L+ FF E LP + +A Sbjct: 75 LDEGNGIFINRNLLHITTEISDGGRYLSFNFPDKVVSFFSGSTMEENFVLPYVGNYGIAV 134 Query: 117 QVYRTNNAFLTYVETVISSLNFR------------ETGLEELVEMVTFYVINRLRHYREE 164 ++ ++ + + + + +++V + + + Sbjct: 135 VEFKRTTSWQKEILDTLLKMELLFKRRREKRQAVGREEYQIAIKIVEIWYMMICNIEKSG 194 Query: 165 QVIDDV----PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + I + + +++ + +H + L ++ S R + K+P + Sbjct: 195 KKISNSYIRKQERIQAMLSYIH-NQYMHPMCLADIAQAGNVSVGECCRGFKEVVCKSPNE 253 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + E RI +K+ L T SVT+++ G++S S FI+ FKK+T TPK+Y+ Sbjct: 254 YLAEYRILRSKELLRGTELSVTEVSGAVGFNSVSHFIQCFKKMTGVTPKAYKN 306 >UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L4_PAESJ Length = 287 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 100/255 (39%), Gaps = 18/255 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISK 98 H HD+YE V +G IN + GD IP + H++F EF + + Sbjct: 33 HLHDWYEIVFVYSGTGTFFINHSFYEMNPGDAFLIPGNTVHRAFPDEFSPVTSSAIFFAP 92 Query: 99 RFFEQHYLPL---LPYCFVASQVYRT---------NNAFLTYVETVISSLNFRETGLEEL 146 RF + L CF ++ ++ AF ++ + R Sbjct: 93 RFIQPMEFGESHSLLRCFEQARKSKSYKLETSPDKREAFSGLIDVMNEEWLNRLPSYRAA 152 Query: 147 VEMVTFYVINRLRHY-----REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAK 201 + + + + L + P W+++ ++ + E +L ++ + ++ Sbjct: 153 IAVRLYDFLIALNRMALTETEHTRSSSAEPSWIRTILDYIDAHIGSQEMSLADLSSKASV 212 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 + + +R +++ G + I +I AK++L +T ++ + G+ S S F K FK Sbjct: 213 TYAHFSRVFKQHTGMNVSEYILIKKIMLAKEKLMLTGDTIASVCLACGFESESYFYKKFK 272 Query: 262 KLTSFTPKSYRKKLT 276 +T TP YR+ Sbjct: 273 LITGMTPVEYRRSCR 287 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 12/262 (4%) Query: 20 FNGKNFHVF-IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGK-RVLLERGDFVFIPLG 77 FN + ++F + ++ES +H HD+ E +++L G + + G + G Sbjct: 9 FNPEIIYLFDPWTQSESHGEMHHHDFLEISVLLEGESTYYFEKEPAKKIRAGSVMLFNPG 68 Query: 78 SHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSL 136 H G + L++G+ E P ++ + ++ L ++ Sbjct: 69 VDHCELQPKGTRSHQLHIGLKNISLEGFKRNFFPNKHPLLELGKYHHQVLEKAWQLVRES 128 Query: 137 NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVP---------QWLKSTVEKMHDKEQF 187 + + + + V ++ + E I+ +P Q + + + Sbjct: 129 SEERDEFQLMQKAVLMEMLVYILRGLNEDHINVLPYLSKSQRRQQQIVNYTVYYLENHYK 188 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 E LE + S YL++ + G +P+ + EIR+ AK L+ N ++ ++A Sbjct: 189 EEITLEKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNENLTIKEVASA 248 Query: 248 AGYSSPSLFIKTFKKLTSFTPK 269 GY F K+FKKL +P Sbjct: 249 VGYQDAYHFSKSFKKLYGVSPS 270 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 6/259 (2%) Query: 20 FNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 F + + Y + S H H + E V++G+ I V + D + I Sbjct: 18 FKLRYISISKYE-GDWQSHPHTHQFSELFYVISGKGVFYIENDTVSVCADDLIIINPHIE 76 Query: 80 HQSFYEFGAT-RILNVGISK-RFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN 137 H + G+ F+ P + F+ + + +I N Sbjct: 77 HTEKTMSNDPMTYIVFGVEGLAFYFNSQNAANPKGYSYYNYGSAKTHFINFSQIMIKEFN 136 Query: 138 FRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV---EKMHDKEQFSESALEN 194 R+ G E + + ++ + + VI D + +K D L+ Sbjct: 137 ARKPGFEAICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAKKYIDANYAKNITLDL 196 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + ++ ++ YL+ + Y G +P+ + E R+ +K+ L ++ S+ ++A G+SS S Sbjct: 197 LAEITHINKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQS 256 Query: 255 LFIKTFKKLTSFTPKSYRK 273 F + F+K T +P YRK Sbjct: 257 YFSQIFRKNTGMSPLQYRK 275 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 100/255 (39%), Gaps = 19/255 (7%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-QSFYEFGATRILNVGI 96 LH H++ E + G+ ++ +E GD + I G H S +E + N+ Sbjct: 37 SLHWHEFMEIIYIKKGKGNVTVDFTTHYVEEGDIIIILPGHIHGISQHEGYSMEYENILF 96 Query: 97 SKRFFEQH---------YLPLLPYCFVASQVYRTNNAFLTYVETVISS----LNFRETGL 143 S F +LPLL +Y ++ + + ++ + G Sbjct: 97 SVDMFRSKNHDSLDSEFFLPLLAGDVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETPKGY 156 Query: 144 EELVEMV---TFYVINRLRHYREEQVIDDVPQWLKST--VEKMHDKEQFSESALENMVAL 198 ++ FYV+ R+E + + L+ T + D+ ++ ++ + Sbjct: 157 HLALKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDIASY 216 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S+ + R + G + + +N+ R+N A + L + SV +A G+ + S F + Sbjct: 217 CGFSESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNR 276 Query: 259 TFKKLTSFTPKSYRK 273 FKK TP YR+ Sbjct: 277 MFKKKYGVTPSRYRE 291 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 17/269 (6%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYF-QEINGKRVLLERGDFVFIPLGSHHQSFYE 85 +F + + H H+ E + VL+G+ I+G E+GD V I + H Sbjct: 19 IFHTSDDAQLVPRHWHESIEISYVLSGKIDDIYIDGIHYTSEQGDIVLINSNAIHSFSVV 78 Query: 86 FGATR-ILNVGISKRFFEQHYLPLLPYCFVASQVYRTN-------NAFLTYVETVISSL- 136 G R + IS F + +Y + F + + + N ++++I + Sbjct: 79 QGKNRKAVTFFISYEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIFNELRENLDSIIRAFS 138 Query: 137 NFRETGLEE-----LVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK-MHDKEQFS-E 189 N R+ L L + + ++ + ++ ++L E + KE +S + Sbjct: 139 NLRDDSLAHIKVIGLSYELIYLLLKNFKISKKSFGEIKTKKYLDRLTEITNYIKENYSQD 198 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +++ + A S EYL+R ++Y G T IN +R+ + + L T+ S+T+IA E G Sbjct: 199 LSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNTDQSITEIALEHG 258 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 + + F K FK + TP YRKK+ Sbjct: 259 FPNEKSFNKVFKTFYNITPNQYRKKIKAL 287 >UniRef50_C0EGG3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG3_9CLOT Length = 343 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 105/258 (40%), Gaps = 24/258 (9%) Query: 46 EFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHY 105 E + G Q K + L++ D + + + H + + N+ ISK FEQ Sbjct: 72 ELIYMYRGGSIQFFQDKELELKQHDILILNPNTIHAPYTTQEEDCLFNILISKSLFEQSM 131 Query: 106 LPLLPYC-----FVASQVYRTNNAF----------------LTYVETVISSLNFRETGLE 144 + LL F+A +Y + A +E +I+ ++ G + Sbjct: 132 MSLLYDNHMFTGFIADCLYHVSTAVEYLYFPSGNNGMSDENSFLIEKLIAEYINKKEGYK 191 Query: 145 ELVEM-VTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALENMVALSAK 201 ++ + +N R + + + + + ++ + + +L+ + Sbjct: 192 NSMKAWLVLLFLNLSRTHSQLHPLKQGEFDNRGVIAEIISYINNNIEDVSLKGLSEQFNY 251 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S EYL+R ++ G++ ++I+ ++ AK LE ++ ++ + +G+ S + F K FK Sbjct: 252 SPEYLSRIIKQNTGQSFIEIVKRFKMEKAKYYLETSDLPISAVMNLSGFKSINYFYKVFK 311 Query: 262 KLTSFTPKSYRKKLTEFN 279 + +P +YRK N Sbjct: 312 RYNGISPSAYRKGARHAN 329 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 108/276 (39%), Gaps = 17/276 (6%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLH----QHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E + F Y H H YE +L+G + +I+ ++ GD Sbjct: 7 KEDMVHGSTKFPFAYYYVNSYHPRYHMITHWHKEYEIIRILSGTFNIKIDAVSYTVKTGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGIS-----KRFFEQHYLPLLPYCFVASQVYRTN-NA 124 +F+ G+ H L IS L+ Y ++ A Sbjct: 67 ILFLNSGAIHSGIPVDCTYECLVFDISSLLQQNSLVNTELNALIHYKKKIQLLFDKKLGA 126 Query: 125 FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRH---YREEQVIDDVPQWLKSTVEK- 180 + + + ++ G + + +Y + + Y +E+ + + S ++K Sbjct: 127 VYDILNQMFEIMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIKEKEFSAINKKSLSRIKKV 186 Query: 181 --MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + +LE+M +++Y + + KTPM+ +N RI A ++++ + Sbjct: 187 LFFIETKYMENISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFD 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLT-SFTPKSYRK 273 S+TD+A++ G++ S F K FKK TP+ Y K Sbjct: 247 SSITDVAYDCGFNDTSYFTKVFKKYNSGMTPREYSK 282 >UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEF5_ALKOO Length = 854 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 102/268 (38%), Gaps = 13/268 (4%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 ++F + + +H H E LVL G + + LL+ D + I + Sbjct: 12 EDFPIRGSIYSIEGFKVHWHSAVEILLVLQGNVSLGVGDHKYLLKENDLILINYNEIYSI 71 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQV------YRTNNAFLTYVETVISSL 136 +L++ I Q+ F + Y+ V+ Sbjct: 72 TRGKEDNLLLSLQIDPVTLSQYDPNFSRLVFDCKSFMYCKDNQEKFDVVRYYMAKVVWEY 131 Query: 137 NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLK-------STVEKMHDKEQFSE 189 + ++ G + + + L + + ++ + +K + ++ + Sbjct: 132 SKKKPGYQLRIASNIHLLAAHLVNNLTNENLNQLKSEIKDKDLARLKRILSYINENIDKK 191 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +L+ + S YL+R + G T + IN +R++ A L +N ++T++++E+G Sbjct: 192 ISLKTIAKNEHISYFYLSRFIKDNLGVTFQEYINTLRLDKAVNLLLSSNKTITEVSYESG 251 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 +++ LF K FK+ +P Y+K E Sbjct: 252 FANIKLFNKLFKETFGASPLQYKKIHKE 279 >UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV13_PAESJ Length = 285 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 102/284 (35%), Gaps = 21/284 (7%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESISGL----HQHDYYEFTLVLTGRYFQEINGKR 63 I T + F + I +++E +S L H H E + G + ING R Sbjct: 1 MKPIPTVTRDLIELPPAFPIVI-SQSEGVSPLFQRLHWHTALEINYISRGSGYYLINGTR 59 Query: 64 VLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--EQHY-----LPLLPYCFVAS 116 GD + I H++F G + + +F EQ Y +P Sbjct: 60 YDFREGDILLINSNDLHRAFENEGLVMTI-IMFDPAYFALEQRYDTELLIPFREIGMRFD 118 Query: 117 QVYRTNNAFLTYVETVISSLNF----RETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ 172 + + L + I + RE E ++ + + Y ++ + Sbjct: 119 NMLDRGHPILPRLGAAIEEMRCEFAGREPHYEAVIRSQLVQFMAFVNRYFAKEQERRSSR 178 Query: 173 WLKSTVEKM----HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + ++ + + L+ + A + S + + G +PM + ++R++ Sbjct: 179 IRGMEIVRLTLNTIEADIAYPWTLKELAAAAHLSPSRFSALFVQTVGTSPMDYLIQLRLS 238 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A LE ++ + ++A AG+ + S F + FK+ P R Sbjct: 239 AAVSLLESSDKKIIEVAESAGFRNLSNFNRLFKQHIGKQPSELR 282 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 91/254 (35%), Gaps = 14/254 (5%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ------SFYEFGATR 90 + LHQHD +E V+ G+ + GD V IP H+ S E G R Sbjct: 31 AKLHQHDAWELYYVVHGQGNRMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEEGHVR 90 Query: 91 ILNVGISKRFFEQ--HYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE 148 L V S E+ P L Q F +I + ++EL Sbjct: 91 YLMVAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRILSEINEMDELER 150 Query: 149 MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD------KEQFSESALENMVALSAKS 202 + + + + + + P ++ V +M K AL+++ + Sbjct: 151 LSAMFRLLPVIFTSSDYTLAGKPMRIERDVRRMQQICAYVMKHYVHSIALDDIAEEVGMN 210 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + +R G T Q + + R+N A L+ T V +I + G++ F++ F Sbjct: 211 RSAFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFVRVFTN 270 Query: 263 LTSFTPKSYRKKLT 276 +P YRK+ Sbjct: 271 TMGMSPTKYRKQYK 284 >UniRef50_C0EGL1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGL1_9CLOT Length = 316 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 106/277 (38%), Gaps = 17/277 (6%) Query: 17 QQLFNGKNFHVFIYNKTESI-SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 ++ G++ + + + +G H HD++E V G + I+ + + V + Sbjct: 40 KKFEKGEDIRIQTHPPLPGVHTGFHYHDFFEMIYVYRGSFMHTIHDETLRQTEDQVVLLN 99 Query: 76 LGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVY----------- 119 LG+ H + E + N+ + K E +L + Y F V+ Sbjct: 100 LGAVHSVWVESKDDIVFNIMMKKSVVENIFLQITSKDHPIYNFFLDSVFGINKLSSFIVL 159 Query: 120 RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE 179 N + +I R+ ++ + + L P KS+ Sbjct: 160 EMNQGISLILNKIIEEYYERKVYNRSIILAYLLVLFSELARKYRSDNNLVAPDHTKSSDI 219 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + K+ ++ LE++ + S+ ++ R + KT +I + +I ++ TN Sbjct: 220 LHYIKQNYASLTLESLADMFGYSRHHMGRLILSWTNKTFTDLITDYKIQSVCSLVQNTNL 279 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 ++ I AG+S PS F KTF+K +YR+ L Sbjct: 280 PISKIVEIAGFSDPSHFYKTFQKKMGIHFSTYRQHLN 316 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 104/280 (37%), Gaps = 22/280 (7%) Query: 15 REQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + F +Y T H H E + G + EI K+ +L +G Sbjct: 7 KELAVHGNYEFPCAVYFSYVSKYTAGEIDWHWHKEIEIINIYQGTLYVEIENKKFILSKG 66 Query: 70 DFVFIPLGSHH-QSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCFVASQVYR 120 D +FI H I++ +K EQ Y+ L C S + Sbjct: 67 DSLFINSEEMHFMKMNTKEECVIISFVFNKSLICGDKGNNIEQKYIDPLINCKELSALEL 126 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE------QVIDDVPQWL 174 T + S + G E +V + ++ + ++ + + + Sbjct: 127 TKED-SKKLAQAYYSYSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSSNNSNTDKERI 185 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 K + ++ K + +L ++ + + R R G +P++ + + RI A + L Sbjct: 186 KRMLAFIY-KNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKYRIYTAAEML 244 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + + +I + G++SPS F K F ++ TP+ YRK Sbjct: 245 RNSEQPIAEICLQTGFNSPSYFSKVFCRMLGTTPREYRKN 284 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 16/249 (6%) Query: 40 HQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGIS 97 H H D+ E + + +G I G++ L++G + G +HQ +E R L++G++ Sbjct: 35 HCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPGVYHQELFEANTNCRELHIGLT 94 Query: 98 K----RFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFY 153 ++ Y+ + + Y+ + + +E V + +T L +V Sbjct: 95 NLNLFSNVKKDYIDIGNKNVLTFTKYK-DEILKSCLEIVEEQKTYNQTSPFMLKSLVMKL 153 Query: 154 VINRLRHYREEQVIDDVPQW---------LKSTVEKMHDKEQFSESALENMVALSAKSQE 204 ++ R EE D ++ L ++ K + + +L + S Sbjct: 154 LVLLYREINEEDTTRDSKEFSFKSREKKALVESITKYLTENYTEDISLYTLSKNMYLSPV 213 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y+++ + G +P+ + +IR++ AK+ L+ + S+ IA GYS P F K +KK Sbjct: 214 YISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKSIAKMVGYSDPYYFSKLYKKYY 273 Query: 265 SFTPKSYRK 273 +P R Sbjct: 274 GVSPNKSRN 282 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 99/290 (34%), Gaps = 14/290 (4%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 ++ A E + F K H H E V G ++I Sbjct: 3 MLKLKPAFEAIEPDFGQSFTYQKFDALKPNKNLVWHYHPEIELVYVNGGNGKRQIGSHVS 62 Query: 65 LLERGDFVFIPLGSHHQSFYE--FGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN 122 +GD + I H F + G T V + F + + + + Sbjct: 63 YYTQGDLILIGSNLPHCGFTDACTGNTSESVVQMKTDFLGSDFFSIPEMRNIRQLFEKAK 122 Query: 123 NAFL---TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID---------DV 170 + + + + E + + ++N L E Q+++ Sbjct: 123 GGIAFTGSAKKKIGEKIEILEYKSDFQRLLAILNILNELGSTSEYQILNAEHLSVETQSK 182 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 +++ + +LE M L+ + R ++ KT +Q +NE R+ A Sbjct: 183 ENERINSIFNFVKENYREPISLEEMADLTHMTVPSFCRYFKKVTNKTFVQFVNEYRMVHA 242 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 L S+T+I FE+G+++ S F K+FK T +P YR +L + Sbjct: 243 SNLLSENEMSITEICFESGFNNFSHFNKSFKAFTGMSPSEYRNQLKSVMR 292 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 107/290 (36%), Gaps = 21/290 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEIN 60 IN P E ++F + Y E H H E V G+ +N Sbjct: 3 INQPAALAYYEAANHGTEDFPLAYYPNLVSVWREFFFVPHWHKEIEILCVHQGQLELVVN 62 Query: 61 GKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFF---------EQHYLPLL- 109 G ++ V IP + H ++ + R + S++ Q P L Sbjct: 63 GFSRKIKANTIVLIPPNTLHTAYRIAQQSCRFSCIVFSEQLITSRQSDRIQSQQIDPFLI 122 Query: 110 -----PYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE 164 Y + ++ F + + + ++RE L+ +V + +++ + Sbjct: 123 QEGVTSYVDFPDKSQQSLTLFQLFDQCFMGKSSYRELRLKGIVIQLLSHLLEVGTDQPAK 182 Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + + + + + V L+++ + S+E TR ++ + +PM +N Sbjct: 183 KSSERLQEKREKIVLSYIHSNYHEMIQLQDLADSVSLSKEQFTRFFKQSFRTSPMAYLNH 242 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 R+ + + L T+ ++ IA G+ + + F FKK+ TP YRK Sbjct: 243 YRLIRSAELLRETDLTMVAIAQAVGFCNSNHFSVCFKKMFGETPTQYRKN 292 >UniRef50_C0EAY1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAY1_9CLOT Length = 329 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 103/279 (36%), Gaps = 24/279 (8%) Query: 22 GKNFHVFIY--NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 G +F + I+ H HD +E V G E+ R L +GD + + Sbjct: 52 GSSFRISIHFDPPGFKHQAFHNHDCFEMIYVYQGELENEMPANRCTLHQGDILLLNPNVW 111 Query: 80 HQSFYEFGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNA---------- 124 H + N+ I K F+ + +L F + +YR + Sbjct: 112 HNVYRNDEKDIAFNIAIPKELFQTYLSNILEDNQMFSFFFSDYLYRDPKSERYLYFQNSG 171 Query: 125 ---FLTYVETVISSLNFRETGLEELVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEK 180 VE ++ ++ + + ++L R ++EE I V + Sbjct: 172 DPWVREPVERMVREYFSKQPNWNSMTLACLIALFSQLSRTHQEESKIAAYENDRNRIVYE 231 Query: 181 M--HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 M + + L M S +L++ ++ GK Q++ E R+N A LE TN Sbjct: 232 MVAYVNAHMQDVTLNQMAEHLKYSPGHLSKLLRKS-GKNFSQLLLECRMNKAGYYLEHTN 290 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 +++I GY++ F K F++ TP YRK + Sbjct: 291 LPISEIIERIGYTNEFHFYKLFRQSFHTTPTEYRKSVRS 329 >UniRef50_UPI0001C3660E AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3660E Length = 334 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 108/276 (39%), Gaps = 22/276 (7%) Query: 19 LFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 L +GK + + + H+H+Y E + G I+G+ V+L G+ +F+ + Sbjct: 57 LEHGKLIRIRPHTRFVHFPK-HKHNYIEVIYMCKGETTHVIDGETVVLRTGELLFLNQHA 115 Query: 79 HHQSFYEFGATRILNVGISKRFFEQHY----------LPLLPYCFVASQVYRTNNAF--- 125 + +N I FF+ + L C Y + F Sbjct: 116 TQEILPAGEGDVAVNFIILPEFFDTAFEMMGEEENLLRDFLVGCLCNDTRYASFLHFKVA 175 Query: 126 -----LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE--QVIDDVPQWLKSTV 178 VE ++ +L + + ++ + +L HY ++ + Q L V Sbjct: 176 DVLPVQNLVENMVWTLLNDQPNKRSINQITMGLLFLQLMHYTDKISHTSEGFDQRLIFQV 235 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 D E + + L + ++ +L+R +R G+T +++ R+N A L T Sbjct: 236 LGYID-ENYRDGELTELSSMLGYDIYWLSRMVKRLTGRTYKELLQIKRLNQAAFLLLNTR 294 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +V D+A GY + S F + FK+ +PK YRK Sbjct: 295 LAVADVALAVGYDNTSYFYRIFKERYQMSPKEYRKN 330 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 107/292 (36%), Gaps = 15/292 (5%) Query: 1 MMQPVINA-PEIATAREQQLFNGKNFHVFIYNK-TESISGLHQHDYYEFTLVLTGRYFQE 58 M Q + NA + + F V I + ++ H HD++E +V G Sbjct: 1 MRQVLQNAGAMMTVLQGIDFFPSGAASVTIEPRLPQAAFPEHHHDFWEIVIVEHGTGTHV 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQ- 117 NG+ L G F+ H + + S + F +L L Q Sbjct: 61 FNGQPYTLSGGSVCFVRDHDRHLYEHTENLCLTNVLYRSPQAF--SFLSGLEKLLPQEQD 118 Query: 118 -----VYRTNNAFLTYVETVISSLNFRETGLE----ELVEMVTFYVINRLRHYREEQVID 168 +R + L ++ L + +EM+ ++ LR + Q Sbjct: 119 GHYPSHWRVSQQTLHQASPLVERLEALRECSDVHAVASMEMLFMQLLILLRSGSQMQGGG 178 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + L + + D E E + S L R ++ G TP + +N +R+ Sbjct: 179 HADERLNQLIAWLED-HYAEEVCWEQLADKHMLSLRTLHRQLKQRTGLTPQRYLNRLRLM 237 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 A+ L + SVTDIA++ G+ + F F++ S++P+ R+ E Q Sbjct: 238 KARYLLRHSEESVTDIAYQCGFGDSNHFSTLFRREFSWSPRDIRQGRDEQMQ 289 >UniRef50_C6D0B3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0B3_PAESJ Length = 300 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 109/285 (38%), Gaps = 44/285 (15%) Query: 33 TESISGLHQ---------HDY-------YEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 +E +H H+Y +E VL GR + G L G+ +FI Sbjct: 17 SELTPSVHWAQLHQTIRNHEYPLRRIYDFELLYVLDGRITAHLGGTDYSLSTGEMLFISA 76 Query: 77 GSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYC-----------------------F 113 G H + G + L +GI FF++ + + F Sbjct: 77 GVPHNLNIDSG--QALFLGIHFDFFDEFDIVIDQDIIVKDDTVVVEDFCSEALLSGCRPF 134 Query: 114 VASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ--VIDDVP 171 + V+ + + +ETVI + G E + + + ++ L+ R E + Sbjct: 135 SDNPVWTPSAELVKEMETVIKEFTLTKPGFEAVCKGLMISILINLQRSRTEAGPHLTTRR 194 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + + VE + ++ + + E + L ++YL + + YG + + + IR AK Sbjct: 195 ERMTPVVEWI-EQHYMEDCSNETLAKLLNIHEDYLGKQFKSVYGMSLNKYVQSIRHREAK 253 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + L ++ +V ++ E GY F + F K +P+ YRK + Sbjct: 254 RLLRESDATVEQVSREVGYEDMHYFSRIFNKWEGLSPREYRKTVQ 298 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 97/281 (34%), Gaps = 17/281 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 A +E + + Y+ +H HD E V G EI+G++ Sbjct: 1 MYAELKENHPHGTREYPFCEYHMRYFPHAFQIPVHWHDEMEIIYVRKGPLTVEIDGQKFT 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPLLPYCFVAS 116 E G G H F ++ + PL + Sbjct: 61 GEDGSVFIASPGVLHMMSAPDTPVDYFTFIFPLEFISFQTKDALEDEVFFPLRNHTRGFR 120 Query: 117 QVYRTNN---AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE-EQVIDDVPQ 172 + ++ ++ T + V + +++ L Y + E++ + Sbjct: 121 PEVADRKLLGKLIPILDELVEENGKMGTHRQIQVRIRLLQMMDLLVEYSQLEELTRNASG 180 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 L+ + L + S++Y++R + T Q +N +R+ +A+ Sbjct: 181 ELEKEILLYIQDNYHDNIGLAELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVRLRYARH 240 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 LE T+ SVT+IA ++GY + S FI+ F +P YR Sbjct: 241 LLESTDLSVTEIAMKSGYQNVSYFIRRFSSAMGESPLRYRN 281 >UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3766F Length = 286 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 107/283 (37%), Gaps = 13/283 (4%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 ++ E + + F + N H H+ E + L + G L Sbjct: 1 MIKNLSGVYETVEYENQRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVVSGGVEYHL 60 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRIL---NVGISKRFFEQHYLPLLPYCFVASQVYRTNN 123 + + IP G H + G I N IS+ + LP+ + Sbjct: 61 SEKEIIVIPPGELHSMPAQDGRRIIFQCDNSVISEVPSLESILPVFSSAVHITPSLNKEL 120 Query: 124 AFLT--YVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE-- 179 L + + + + + + M ++ +R ++ ++ +++ E Sbjct: 121 YVLARKNILDIYTEYYSKAPMADVRIYMYLITILTAIREFQLNSADENSASAAENSDESR 180 Query: 180 ------KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 K ++ E LE + +++ S+ + +R ++Y + +Q IN RI A++ Sbjct: 181 KFGLVTKYINQNYMYELPLEKLASIAGYSKYHFSRIFKKYNNMSYIQYINSKRIKAAERL 240 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + ++ +T++A + G+SS + F + F+K TP +RK Sbjct: 241 MADSSLPITEVAMQCGFSSLTTFNRAFRKAKGCTPTEFRKLFK 283 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 105/284 (36%), Gaps = 22/284 (7%) Query: 12 ATAREQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 T RE F + ++ + + + H H++ E ++G E Sbjct: 3 KTLREPMTMPDPQFPIKVHRCEFDGRGQVLFNHHWHEHLEILYFVSGEATLECGSTTFTA 62 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL 126 + GD + I H + + + H L F+ + + F Sbjct: 63 KEGDMIVINRNELHYGLSQSDHLFYYALIADFSLLQSHSLDAPEMKFIT-PITQNRLIFE 121 Query: 127 TYVE---------TVISSLNFRETGLEELV--EMVTFYVINRLRHYREEQVIDDVPQWLK 175 + ++I L +E G E + E+ + + D+ + +K Sbjct: 122 NRISGADALAPMLSIIKELERQEFGYELAIKSELYRLLTLLLRGYVATVLTQDEYVERMK 181 Query: 176 ST-----VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + + K ++ + ++E + ++ S+ + +R + G+T + +NE R+N A Sbjct: 182 NVERFAPIFKYIEEHYREDLSVEQLSGMAGLSRFHFSRLFKEISGRTVTEYVNETRLNRA 241 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L + +V++IA G++ F +TFKK P + RKK Sbjct: 242 DYLLRESPLTVSEIAAATGFNDIYYFSRTFKKYKRMAPSALRKK 285 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 94/245 (38%), Gaps = 13/245 (5%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 G H+H E V G + + + + + I H T ++ + Sbjct: 41 GPHKHLRIEINYVKKGNCILHLENESISFSENEMMVICSNVEHTFEAGSEDTTLMQLEFL 100 Query: 98 KRFFEQ-------HYLPLLPYCFVASQ----VYRTNNAFLTYVETVISSLNFRETGLEEL 146 F + L P + + N + V+ +++ +N + + L Sbjct: 101 PEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNEMNQKSKYYQYL 160 Query: 147 VEMVTFYVINRLRHYREEQVID-DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 V M ++ + Y +E + LK + + Q S+ + ++ + + + Y Sbjct: 161 VVMYYAELLILIYRYLDEAYLPICTNDSLKKAISYIRLNYQ-SDITISDVASQTGVGERY 219 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L + +Y +P+ +N+IRIN A + L T SV ++ F G+ SP F + FK+ Sbjct: 220 LRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSPQYFSRIFKQQMG 279 Query: 266 FTPKS 270 +P+ Sbjct: 280 ISPRE 284 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 116/306 (37%), Gaps = 38/306 (12%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISG----LHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 +T +E ++ ++F Y I G H H+ E G + E+N +R + Sbjct: 7 STLKEIRVHGTQDFPCAFYQTGTRIKGNMVKHHWHEEVELLYFSGGEFCLEVNMERFNIS 66 Query: 68 RGDFVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYL----------PLLPYCFVAS 116 F FI G H E + N V Y P+ Sbjct: 67 EECFYFINPGELHSISVEKNGGCVENAVVFHMDMLNSAYALDQIQTNLIQPVQNGSIQFP 126 Query: 117 QVYRTNNAFLTYVETVISSL-------NFRETGL-----------EELVEMVTFYVINRL 158 + R N V + +FRE + ++ ++ L Sbjct: 127 RCLRKNEPAFEPVRKSYEEIRNVFGGDSFRENYYDGEAVTDDITRQLFIKSALLRILAVL 186 Query: 159 RHYR----EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYY 214 E+ D + +K+T+ + + + + + ++ L +++Y R ++ Sbjct: 187 SANNLFEVTEKNHDHRIETIKTTLTYIQENYK-EKIYIRDLAGLIGMNEQYFCRFFKKVI 245 Query: 215 GKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 G++PM+ +NE RI A L+ ++ +VT+I E GY++ F++ F+K TS TP YR+ Sbjct: 246 GRSPMEYVNEYRIKRAIHYLKESDLTVTEICLECGYNNLGNFLREFRKYTSTTPLQYRRH 305 Query: 275 LTEFNQ 280 + Q Sbjct: 306 SLKETQ 311 >UniRef50_C0EDX0 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDX0_9CLOT Length = 360 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 106/256 (41%), Gaps = 20/256 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 H HD++E V G + +RV ++ + + S H + T N+ + Sbjct: 96 PHYHDFFELLYVYRGSVVNVVHRQERVTVDSKHVLLMNPNSRHLPLCDELDTIAFNIMLR 155 Query: 98 KRFFEQHYLPLL-----PYCFVASQVYRTN-----------NAFLTYVETVISSLNFRET 141 + F E+ L L+ Y F +Y N + + ++ ++I + Sbjct: 156 RSFIEETVLNLIGGNNFVYHFFLHSIYGENEMRDYLFLPVNDEIVGHIHSIIREHCEEKP 215 Query: 142 GLEELVEMVTFYVINRLRHYREEQVIDDVPQWL---KSTVEKMHDKEQFSESALENMVAL 198 E+++ ++ ++++ + + + K T + + ++ L+++ Sbjct: 216 FYEQMLVSNLILLLGEFARIQKQETDLESERLVGSGKLTDMLRYIQLHYATVTLQSVAEH 275 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + S YL+R ++ GK+ +I++ IR + A L+ + ++ I+ GY + F + Sbjct: 276 FSYSDAYLSRLIKKETGKSFSEIVSGIRFHTACNYLKHSTLTIEKISDIVGYQNVGNFFR 335 Query: 259 TFKKLTSFTPKSYRKK 274 FKK +P YRK+ Sbjct: 336 AFKKNCGVSPSDYRKQ 351 >UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM6_9CLOT Length = 383 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 104/265 (39%), Gaps = 24/265 (9%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 +T +GLH H+Y+ T V G + G+ ++GD F+ H+ + Sbjct: 108 RTHFETGLHTHEYFVITYVFRGECYCYFGGEEFHFKQGDIWFLNTQVSHKLLLPGDDCVV 167 Query: 92 LNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNA-------------FLTYVETVI 133 ++ + + F L + F + ++ +N Y+ ++ Sbjct: 168 FHICLRQTSFCSVLLDKIKNNEQFVHFFVNSIFDEDNNPCLMQFHIRELSVAQYYLFKML 227 Query: 134 SSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV------PQWLKSTVEKMHDKEQF 187 ++ +E++ + ++ +L E + ++ + L + + E Sbjct: 228 EEYYDQKMHSQEVIAYLFCCLLIQLERNCEAEAVEQEAHRNGRQKNLDISEVIAYLMEHQ 287 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 L+ + YL+R QR+ GKT ++ +N IR+ A + L T + I+ Sbjct: 288 QTVTLQQAASHFHYVPAYLSRFIQRHTGKTFLEFLNGIRLERAAEMLRNTTLPIRQISHM 347 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYR 272 GYS S F ++FK+ TP+ YR Sbjct: 348 VGYSDRSSFDRSFKRQYHMTPRKYR 372 >UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN97_9FIRM Length = 281 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 90/257 (35%), Gaps = 13/257 (5%) Query: 31 NKTESISGLHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 T +H+H D EF L+ G I+G+R ++GD + I H Sbjct: 29 PYTSMPRTMHRHGDVAEFILITEGSGIHIIDGQRYYTQKGDLLLIGQDVVHDESSPANR- 87 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVYRT-------NNAFLTYVETVISSLNFRETG 142 N+ I LP LP F +E + + Sbjct: 88 ---NLSIYSGAIRGLQLPNLPAGKFLPPDVLPVLKTEGLFPDFCHLLEFMYRGAQGKGCH 144 Query: 143 LEELVEMVTFYVINRLRHYREEQV-IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAK 201 EE + + ++ + V + L + V D L + Sbjct: 145 PEESINHLLCALLLLVMEVTSRSVVLPPEEHHLLAGVRSRLDAAYDETITLAGLAQEFHV 204 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S +L A + YG P+Q I RI A+ L T +T+IA GY+S S F K F Sbjct: 205 STFHLAHAFKAAYGYAPLQYITRRRIGEAQTLLIDTALPITEIAIRTGYNSSSYFNKAFH 264 Query: 262 KLTSFTPKSYRKKLTEF 278 K+T +P+ YRK + Sbjct: 265 KITGMSPRDYRKTYRKI 281 >UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1K3_CLOBU Length = 285 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 115/268 (42%), Gaps = 10/268 (3%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 E L ++ LH H+ EF LVL G +IN K + ++RG+ F+ Sbjct: 9 ETDLLIPAKIYIGNSKGENCHYPLHWHNNLEFVLVLCGEIKGKINNKYIDVKRGEIFFVN 68 Query: 76 LGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVIS 134 G H+++ + + + + +S ++++ + Y F + + + Sbjct: 69 SGELHETWANDKNKIKAITILLSYELLKKYFPNIDSYYFDFEEKEDSKGKIKDLIVKCGE 128 Query: 135 SLNFRETGLEELVEMVTFYVINRL-RHYREEQVIDDVPQW-------LKSTVEKMHDKEQ 186 +E E + +V + N L + +E+ + ++ +K + M + Sbjct: 129 IYTNKENFYELNMSIVLMELCNILFKECLKEKEVGNIYNIEEKREVNIKRAITYMEENYD 188 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + +L ++ + Y +R ++ G+T +N+IR+ + K+L T S+T+IA Sbjct: 189 L-DLSLSDISREIGMAPTYFSRFFKKNTGETFYSYLNKIRLYHSYKELINTEASITEIAL 247 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 G+S+ FI+ FKK + TP YR + Sbjct: 248 NNGFSNVKSFIEIFKKAYNNTPAKYRNE 275 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 98/251 (39%), Gaps = 8/251 (3%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEF-GAT 89 ++ S LH H + E V+ G + + ++ ++ D + I H + G Sbjct: 25 DSDWHSTLHSHPFAELMYVVRGSGYFRFADNLKLPIQADDLIIINPNVLHTECSDAEGGL 84 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEM 149 + +GI F + + L Y++ ++ + + E +VE Sbjct: 85 EYIVLGIDGVEF--YTEQNAHPGVSIHNYEDYKHEILFYIKAILEAGKTHDEMSELIVEN 142 Query: 150 VTFYVI----NRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 + ++ R + + +E + L+++ +L+ ++ Y Sbjct: 143 LLRVLVLNTMRRTTSLLDVETSTGGDNKDCIFLEHYLNLHYRENITLDHLASLTFLNKFY 202 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L+ + G +P+ + R+ AKK L T+ S+T I+ G+ SPS F + FK + Sbjct: 203 LSHIFKEQTGLSPIDYLLRKRMIEAKKLLINTDLSITQISDIVGFRSPSYFSQFFKNMEC 262 Query: 266 FTPKSYRKKLT 276 +P S+R K Sbjct: 263 MSPSSFRNKHK 273 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 102/289 (35%), Gaps = 25/289 (8%) Query: 12 ATAREQ--QLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 REQ N + + + + H HD+ E +L+G +I + + G Sbjct: 3 CDNREQLLDQLNPTFLFTWKGTRLKDEARYHSHDFIEMAFILSGHGKYKIADRLYDVSEG 62 Query: 70 DFVFIPLGSHHQSFYEF----------GATRILNVGISKRFFEQHYLPLLPYCFVASQVY 119 D + + G HQ+ G + + + H L S + Sbjct: 63 DIIILNPGQKHQALCTDPSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDPATQSPIL 122 Query: 120 RTNNAFLTYVETVISSLNFRETG-----LEELVEMVTFYVINRLRHYREEQVIDD----- 169 T+ + + ++++ L + +I LR E I+ Sbjct: 123 HTSGELRQKLFKICTAMSVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKINTGCSFE 182 Query: 170 --VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 +++ + + + +L+ + S Y++R + G TP++ + IR+ Sbjct: 183 STSKKYVVDQIVNYFEDHYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIRHLINIRL 242 Query: 228 NFAKKQLEMT-NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 AK+ LE + S+ ++A + GY F K FKK P R+ L Sbjct: 243 EKAKELLENGFDGSIQEVAAKVGYDDVYHFSKLFKKRFGMPPSKIRRLL 291 >UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C7G9X0_9FIRM Length = 303 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 117/297 (39%), Gaps = 28/297 (9%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEI 59 T RE + Y H H EF G I Sbjct: 8 TFKITTDETLRETIQHGNNRYPFAYYPDNIWKFDFHRIDWHWHHELEFLYTAEGTALCLI 67 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRF--------FEQHYLPLLPY 111 ++ L +G +FI G H+ F +T N+ S +E++ LP++ Sbjct: 68 GTSKIELHKGCGIFINSGVLHR-FEAQSSTFAPNIVFSPTLLAPENSLIYEKYILPVISS 126 Query: 112 CFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQV----- 166 V QV+ +N F V ++S + + + E+ T ++ +L + ++ + Sbjct: 127 S-VPYQVFSPSNTFGKQVLQLLSQICTIQE-TKPDNELCTIQLLFQLWNILQKNMDWTSD 184 Query: 167 ------IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 ++ L++ ++ +HD E LE + A ++ S+ Q +P+ Sbjct: 185 SNSIHRLNHKQARLQAMMQYIHD-HYMEEITLETIAASASISKSGALHIFQTGIHCSPVA 243 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + + R+ A +QL +T SV+ IA E G++S F + F++ +P YRK+ TE Sbjct: 244 YLIQYRLAQAAEQLYITQKSVSSIAEETGFTSSGYFCRKFRQYYHMSPNEYRKRKTE 300 >UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEI4_9FIRM Length = 299 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 106/275 (38%), Gaps = 16/275 (5%) Query: 14 AREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 E + K ++ ++ + +H H +YEF +V G +N + +GD VF Sbjct: 8 GMEHTFLDEKTGLLYRNSRFRQTASIHTHTFYEFFIVAEGSALHLVNDSIQTITQGDLVF 67 Query: 74 IPL-GSHHQSFYEFGATRILNVGISKRFFEQHYL-------------PLLPYCFVASQVY 119 I +H FY RI+N+G S++ + L LP C + Sbjct: 68 IRPKDTHSYQFYYSDDFRIINIGFSEQLLQNIRLFLDHTAMLRTLTESELPPCVRLDKSG 127 Query: 120 RTNNAFL-TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV 178 R + + ++ + ++T + + + EE P W + + Sbjct: 128 REEISVRFEEIGALMDTPKIQKTVFYAKCCLADVFTRYFFSYDTEEFPTASCPSWFQPML 187 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 +M + M+ LS+ S +L R + TP + IN R+ ++ L T+ Sbjct: 188 NEMQKFDNLR-IGFPKMIELSSCSSNHLCRVFKSVMSVTPTEYINSKRLEYSVYLLTQTS 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + +I+ G+SS S F FKK P +RK Sbjct: 247 KEIIEISMLCGFSSLSHFYHLFKKKYQCPPSRFRK 281 >UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=C6D4D7_PAESJ Length = 289 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 107/273 (39%), Gaps = 26/273 (9%) Query: 25 FHVFIYNKTESISGLHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 F++ E + LH H D+ E +VL G +N + +++GD I G+ ++ Sbjct: 17 FYIGYGGHDEDMY-LHDHVDFSELVIVLNGNATHIVNTEVSFIKKGDVFVID-GATSHAY 74 Query: 84 YEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNNAF----------LTY 128 + RI N+ L FV YR F L Y Sbjct: 75 KDPHDFRICNIMYRPDILTSAGPDLRTSIGYQALFVLEPFYRNIQPFNSKLSLPIPSLEY 134 Query: 129 VETV----ISSLNFRETGLEELVE---MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 V ++ I + G + ++ M ++R +++Q I L + + M Sbjct: 135 VSSLAAFMIEEYTNKLQGYQTMLRSRFMELVVYLSRQYQNQDQQGIQGNLMHLANAISFM 194 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 D E + S S +L R Q YY TP + +R+ A L+ T + Sbjct: 195 ED-HYLEPLTREQIADKSGISVRHLNRIFQSYYPTTPFAYLLRLRLEHACHLLKTTPVPI 253 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 T++++++G++ + F + F K+ PK YR++ Sbjct: 254 TEVSYKSGFNDSNYFTRQFTKVYGLAPKVYRRE 286 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 12/258 (4%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEF 86 + ++ ++ H H YE +++G+ I + +++ GD V I H++ E Sbjct: 17 YRKARSHNMPVSHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVIISPNILHRTTNTET 76 Query: 87 GATRILNVGISKRFFEQ-HYLPLLPYCFVASQVY-----RTNNAFLTYVETVISSLNFRE 140 L V I ++ Y+ +L + + A T ++T+I+ ++ ++ Sbjct: 77 PEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIETMLQTMIAEMSEKK 136 Query: 141 TGLEELVEMVTFYVINRLRHYREEQVIDDVPQ-----WLKSTVEKMHDKEQFSESALENM 195 G E + ++ + + ++ + S V + + +E +L + Sbjct: 137 PGFELYALTLALQLLLICCRHAKSSSMETLESPSPMHERISEVVRYMNSHYMNELSLHLL 196 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S YL+R + G T ++ +N +RI AKK LE ++ V IA G+ S + Sbjct: 197 AEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVNLIAKRVGFGSVTH 256 Query: 256 FIKTFKKLTSFTPKSYRK 273 F + FK +T + P YRK Sbjct: 257 FGRVFKSVTGYVPLHYRK 274 >UniRef50_Q0ST06 Transcriptional regulator, AraC family n=13 Tax=Clostridium RepID=Q0ST06_CLOPS Length = 686 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 14/268 (5%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 + V I LH HD E VL G +I+ ++ + + H+ Sbjct: 9 PSDIPVTISYVNIKNYPLHWHDAIEILYVLKGSIKVDIDTDSYEIQEDEIEIVNTEQTHR 68 Query: 82 SFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS------QVYRTNNAFLTYVETVISS 135 Y R+L I FFE++Y + F + Q + + ++ ++ Sbjct: 69 -IYSNKDNRVLIFKIDPHFFEKYYSDIENMFFYTNTSDEGAQSDESYDKLRVFLSIILCE 127 Query: 136 LNFRETGLEELVE----MVTFYVINRLRHY---REEQVIDDVPQWLKSTVEKMHDKEQFS 188 + ++ +E + F+++N + +E +++ + K Sbjct: 128 EAQKVDDYDKYIEKSLVELLFHLLNNFHYLLYDNDEIHENNMLLERYHRISKYIYNNYNK 187 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 L+++ S YL+ + G + ++N R+ + K L T+ S+++I++E Sbjct: 188 NITLKDIANTEFLSTHYLSHEIKYATGLSFTDLLNLTRVEESVKLLLDTDKSLSEISYEI 247 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G+S F K FK + TP +RKK Sbjct: 248 GFSHTRYFNKHFKAYYNCTPLQFRKKHK 275 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 106/278 (38%), Gaps = 22/278 (7%) Query: 16 EQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 E + ++ Y + H H +EF V +G I K+++L G+ Sbjct: 18 EIKQHGSSDYPFQYYYDNLELFDFHCIEWHWHREFEFLYVESGEVTCGIGEKQIILSEGE 77 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRF--------FEQHYLPLLPYCFVASQVYRTN 122 +FI H+ FY I N F ++++ LP++ + Sbjct: 78 AIFINSKILHR-FYAPSGGIIPNFVCMPEFIAPENSLIYKKYILPIISSNIYFQRFQTDE 136 Query: 123 NAFLTYVETVISSLNFR-ETGLEELVEM-------VTFYVINRLRHYREEQVIDDVPQWL 174 ++T+I + + + EL + +TFY +L + Q +D+V Q Sbjct: 137 LWQTKIIQTMIKIMEIQGNEKIRELATLALMQDLWLTFYENVKLSDKGDVQTVDEVAQKR 196 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 + + + +L+ + + S+ R+ TP+ + R+ A L Sbjct: 197 VQLIMQYIHENYNHNLSLDEIASHIGISKSTALNLFHRFLHTTPVNYLIGYRLQAASWLL 256 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + TN V IA+E+G+ + F + FKK TP YR Sbjct: 257 KNTNKKVKTIAYESGFHNVDYFCRLFKKRYHLTPSEYR 294 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 97/261 (37%), Gaps = 16/261 (6%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 +N S + H H+ E ++ G IN L +GD + I G H F E Sbjct: 19 FFNDGYSNTPHHWHEDIEIIYLVEGTLKACINRDTYDLTQGDILIIGGGEIHCFFKEKKF 78 Query: 89 TRILNVGISKRFFEQH---------YLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFR 139 + + ++ P+ + + ++ +I+ + Sbjct: 79 SNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHALMERHINEIINEYSKA 138 Query: 140 ETGLEELVEMVTFYVINRLRHYREEQVIDDV-----PQWLKST--VEKMHDKEQFSESAL 192 E G + +++ + + L Y +Q + LK V + D L Sbjct: 139 EEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMDSVFQYVDTNYQERIDL 198 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 +++ S+ Y T+ + G T + +N RI A+ ++ + ++ +IA+ G++S Sbjct: 199 DDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDETIAEIAYNCGFNS 258 Query: 253 PSLFIKTFKKLTSFTPKSYRK 273 F + FK + TP YR+ Sbjct: 259 IKTFNRLFKNIVGCTPMKYRR 279 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 10/261 (3%) Query: 25 FHVFIYN--KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 F +FI+ H H E LVL G IN ++ L+ DFV + H S Sbjct: 16 FRMFIFEGRDGNYRVSKHWHQSVELFLVLEGTLDFFINSRQYTLKPNDFVIVNPNEIH-S 74 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETG 142 + + I + FE + F + + V + + E G Sbjct: 75 IECPDPNITIVLQIPMKSFEGYMSDESRITFADKDESQKAR-LVALVTAMYRTYEKGEFG 133 Query: 143 LEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-----HDKEQF-SESALENMV 196 V+ + + + ID V K ++K+ + KE + E +LE + Sbjct: 134 YRLKVKSQFMEFLYLIVTEFRIEQIDKVRVQQKRHLDKLSQVTQYMKENYDKELSLEMVA 193 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 + + YL+ + Y + ++R+ +A ++L ++ V DIA + G++ F Sbjct: 194 SRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVGDIALDHGFADARAF 253 Query: 257 IKTFKKLTSFTPKSYRKKLTE 277 K FKK P YRK++ + Sbjct: 254 AKAFKKRYGCLPSQYRKQMNQ 274 >UniRef50_A6BF68 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF68_9FIRM Length = 348 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 112/276 (40%), Gaps = 22/276 (7%) Query: 21 NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 + +NF + LH HDY E + V+ G + Q I K V+ ++GD I H Sbjct: 71 SPENFCYHYSYSEGKYTQLHTHDYLELSYVVEGEFHQRILNKDVVFQKGDLCLIDKNCLH 130 Query: 81 QSFYEFGATRILNVGISKRFF----EQHYLPLLPYCFVASQVYRTNN--AFLTY------ 128 Q + +L +GI+ F ++ P F+ S + + + FL + Sbjct: 131 QDCLTDQSGVVLFIGIANDMFTEIMNENSTPQKILSFLQSALLKQKDVQQFLHFRPSDGA 190 Query: 129 -------VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ---WLKSTV 178 + ++ ++G + + + F + L + + + Q W+ Sbjct: 191 SESLDDSLLLLLKESYSPDSGSRYITKGLLFRIFRILSTQYDFSLSKEQKQTMNWIVFEE 250 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + F + ++++V ++Y R +R G T + +IR+ A+ L T+ Sbjct: 251 ISDYIRAHFRDITIQDLVDEFHYQEDYFNRLIKRKTGLTYSAYVQQIRLERAEHLLVSTD 310 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 S+ +IA GY + F K F++ TP SYR+ Sbjct: 311 KSIEEIADSVGYHNKGYFYKLFQEKYEETPASYRRH 346 >UniRef50_C6JCM1 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCM1_9FIRM Length = 303 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 109/269 (40%), Gaps = 16/269 (5%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 ++ N + LH H+Y E G F ++ +F IP H + + G Sbjct: 22 WVQNYGNDVDYLHFHNYLEIGFCYEGDGFMAFGEAKMRFSGREFTVIPPNYAHTTNSDLG 81 Query: 88 A-TRILNVGISKRFFEQHYLP------LLPYCFVASQVYRTNNAFLTYVETVISSLNFRE 140 ++ + I F + +L + + ++ N F + ++ +N Sbjct: 82 TVSKWEYLFIDVEGFMKKFLNNPVKAEKMIQRIYSKALFLKENEFPSIAAKILKIMNIMR 141 Query: 141 TGLEELVE------MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD---KEQFSESA 191 G E +E I RL E +++ L + + ++ D + Sbjct: 142 EGEEFYIEESSGVLAALLVEIARLNRASPEDRVEEETGKLTNMITRVLDFVSYHYMEDIR 201 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E++ + S+ + R + +P++ IN +RI+ A + L+ T+ V DIA + G++ Sbjct: 202 IEDLAKICHISETHFRRVFTSHMKVSPLEYINSVRIHTACEFLQKTDIPVADIAHKCGFT 261 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 + S F + F+++ TP +RK+ + Q Sbjct: 262 TNSTFNRNFRQIMGVTPVEWRKRPENYEQ 290 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 108/268 (40%), Gaps = 15/268 (5%) Query: 23 KNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 K+ + ++N H H +E + Y K +L+ GD + I G H+ Sbjct: 16 KDMQIRLHNNDVCENYPPHWHTPFELIMPTESGYSVHCGEKEYVLDEGDIIIICPGVIHE 75 Query: 82 SFYEFGATRILNV----GISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN 137 F RI+ + I + + + P ++ + + +A + + I Sbjct: 76 LFSPPKGVRIIFLVSLAQIDLQELDLVISMISPAILISPEKFPQIHAQIHRLMLEIRDEY 135 Query: 138 FRETGL-EELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--------HDKEQFS 188 FR E + ++ + E + E M + E ++ Sbjct: 136 FRNLPYTESSIYAKFLEILVLVGRCYAEIAQHNFEAKNNKQQEYMEKFLFICNYINEHYA 195 Query: 189 ES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 E +LE + +L+ S+ + TR ++Y T + +N+ RI AK L N SV DI+ + Sbjct: 196 EPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLLVDKNLSVLDISLQ 255 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 G+S+ S F++ F+KLT FTP RK Sbjct: 256 CGFSNLSSFLRMFRKLTGFTPTELRKMY 283 >UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIE9_9CLOT Length = 361 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 100/262 (38%), Gaps = 19/262 (7%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 K+ LH H+++E V +G +G+ L +G H + T + Sbjct: 87 KSHFKEYLHSHEFFELFYVYSGTCHCYFDGREFRLPKGTIWIFNTQCAHNVYLPDDRTNL 146 Query: 92 LNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNAFLT-------------YVETVI 133 +N+ + K F L ++ F + +Y +++A Y+ +I Sbjct: 147 VNILLRKSTFSAALLGMINDNDLFLSFFLNSIYNSDSAPKQLQFTTEPGGMSEFYIFKII 206 Query: 134 SSLNFRETGLEELVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 + + +++ + ++ L R YRE L + + + + + L Sbjct: 207 EEYAGKSPYSQSIMKHLFCCLLAELTRQYRERADNRGRESGLHISQVISYISDNYRIATL 266 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 ++ + YL++ ++ +T + + ++ A L T + +A GYS Sbjct: 267 QSTAEHFHYNPSYLSKYMLKHTNQTFSEYLTRFKLEKAAHLLTSTALPLERVASLTGYSE 326 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S F K FKK + TP+ YR + Sbjct: 327 RSAFDKAFKKFSGLTPRQYRSQ 348 >UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE80_9FIRM Length = 323 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 95/287 (33%), Gaps = 26/287 (9%) Query: 16 EQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 E F + +Y H H EF VL G + ++ G Sbjct: 14 EITCHGSPAFPMEVYLDNLDLYPNRFIPWHWHKELEFVYVLEGTIEFQTGVSTYVIGSGQ 73 Query: 71 FVFIPLGSHHQ----------SFYEFGATRILNVGISKRFFEQHYLPLL----PYCFVAS 116 +P H + A L G+S E+ Y+ L F Sbjct: 74 GGLVPSNMLHMVSPYHRQHGSIYCAVLADSYLLHGLSGGLIEEQYISALFRPETDFFFLD 133 Query: 117 QVYRTNNAFLTYVETVISSLNFRETGL----EELVEMVTFYVINRLRHYREE--QVIDDV 170 + L + + R G + LV+ + L +E V D Sbjct: 134 GTSPWHAGVLACIHEMYQCDCSRPRGYLWKLQILVQQAGLILFENLDMKQEPCPSVHDSR 193 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 Q ++ +E +H KE LE++ + S R + ++P+ + R+ Sbjct: 194 YQRVRCCLEYIH-KEYAGRLRLEDIARAANVSVSECCRDFKEVLSQSPVDYLISYRVRMG 252 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + L ++ SV +IA G+S S F TF + TP YRK L E Sbjct: 253 EYMLAHSDKSVLEIALAVGFSGSSHFSNTFCRYMGCTPLYYRKHLME 299 >UniRef50_C6PNM8 Transcriptional regulator, AraC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNM8_9CLOT Length = 335 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 116/281 (41%), Gaps = 24/281 (8%) Query: 21 NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 N ++ + +++ H HDY E V +G Q I V +++G+ + + + H Sbjct: 56 NSEDISIHKHDRFIEFKK-HSHDYLEMMFVYSGSIKQIIEDTDVEIKKGEILLMDMNVEH 114 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPY----------------------CFVASQV 118 +NV I + FF ++ + CF S+ Sbjct: 115 SIKEAQENDIAINVLIKEEFFNWIFMNQIADNDLISNFIVKALYNKNKFRQFLCFETSKN 174 Query: 119 YRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV 178 R + + + + N ET + + ++ ++ Y VI+ V + + Sbjct: 175 KRVWDFMINILIEYYENKNGMETAIRSYIVLIFNELLRCYNEYLPSSVINKVESNIYVEI 234 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 K DK +++ L+++ + S +Y+ + ++ G T ++ +I+++ K L+ ++ Sbjct: 235 VKYIDK-NYNDLNLKDLANYFSYSTDYMGKLIKKVTGNTLTELQKKIKLDKVKYLLKNSD 293 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 +S+ +I + GYS+ S F K FK+ TP YRK N Sbjct: 294 FSIEEIIRKVGYSNLSYFYKQFKEDVGMTPDKYRKNSITLN 334 >UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9M5_9FIRM Length = 315 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 95/263 (36%), Gaps = 20/263 (7%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 + H H EF+++ G E + L++GD +FI H + + Sbjct: 37 FFRYYNRYFRCHWHPEIEFSVITEGECIYEAGDRVYELKKGDGIFINQNVLHMAEMKGKL 96 Query: 89 TRILNV--------------GISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVIS 134 V I ++F E C + + +I Sbjct: 97 ECRFGVVRAEAFFLGGSTESLIYRKFMEPVINNPEISCVPFYGDIPWQKRLMRQLAELIR 156 Query: 135 SLNFRETGLEELV-EMVTFYVINRLRHYREEQ----VIDDVPQWLKSTVEKMHDKEQFSE 189 R G E ++ + + ++ EE+ I+ + ++ + + + + Sbjct: 157 IYEERPEGFELMMTSGFSLLWLEFVKALGEEKGNAVSINKDAERIRKGISYI-QRNYTKK 215 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 L+++ + Q R + ++P++ +N RI + +E YS+T+IA + G Sbjct: 216 ITLKDIAEICQSCQSECCRMFRNVVKESPIEYVNTYRIRRSLILIEEGTYSMTEIAQKTG 275 Query: 250 YSSPSLFIKTFKKLTSFTPKSYR 272 +S S F + FKK TP Y+ Sbjct: 276 FSGSSYFTEVFKKKMGCTPSKYK 298 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 101/261 (38%), Gaps = 19/261 (7%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL 92 ++ LH HD + ++V G + K +L+ G +FI H + I Sbjct: 36 SKGYVKLHWHDEIQISIVTKGSVEFIVGEKSYILKNGQAIFINTQRIHMAKSVGDEDCIY 95 Query: 93 NV---------GISKRFFEQHYLP--LLPYCFVASQVYRTNN---AFLTYVETVISSLNF 138 + EQ Y+ + + ++Y NN L Y+ +I+ Sbjct: 96 HAIMFNAKLLKMFPGSIIEQKYIDPVITSNKLNSIEIYGNNNWEQDALKYISDIINVDII 155 Query: 139 RETGLEELVEM-----VTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALE 193 ++ G E + + V+N + ++ + + V + ++ L+ Sbjct: 156 QDKGYELKIYIDLLNFWLLLVLNDKDIFNQKMEPKPINEQRIKDVLSFIHQNYSNKITLQ 215 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 ++ S+ R ++ +P + RIN + K L+ ++ S+ DI+ G+++ Sbjct: 216 DIADAVFVSKGECCRFFKKSLKMSPYDYLINYRINESMKLLKNSSLSILDISENVGFNNV 275 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 S +I+ FKK T TP YR Sbjct: 276 SHYIQIFKKKTGQTPLEYRNS 296 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 89/254 (35%), Gaps = 14/254 (5%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY------EFGATR 90 + LH+HD +E V+ G + GD IP H Y + G R Sbjct: 31 AKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGDVALIPPSMLHHWEYSPDSADDDGYVR 90 Query: 91 ILNVGISKRFFEQ--HYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE 148 L V S E+ P L F T I + + ++EL Sbjct: 91 YLMVAFSHSLVERCMAVFPELRNRLTGITFPTNALKFGTGSSQTIRRILSQMNDMDELGR 150 Query: 149 MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD------KEQFSESALENMVALSAKS 202 + + + + P ++ V +M +L+++ A + Sbjct: 151 LCEMFRLLPAIFTSSDHTFAGKPMNIERDVRRMQQICVYVMTHYIHTISLDDIAAEVGMN 210 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + +R G T Q + + R+N A + L+ + V++I F G++ F++ FK Sbjct: 211 RSAFCSYFKRCKGMTFSQYVTQYRLNTACELLKHSQKQVSEICFTVGFNDLPHFVRVFKN 270 Query: 263 LTSFTPKSYRKKLT 276 +P YR++ Sbjct: 271 TLGMSPSKYRRRFQ 284 >UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Clostridium RepID=Q187Y6_CLOD6 Length = 298 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 107/254 (42%), Gaps = 16/254 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H++ + + G + E + G+ V H + ++ I Sbjct: 34 HWHEHLQIYYFIDGIAYLECGLDNFKVVPGNIVIANSNELHYLESLSDNLKFYSIRIEPT 93 Query: 100 FF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMV 150 F ++ PL V + + + ++ L + T++ + +E G E ++ Sbjct: 94 FLFSNQVDLLQTKYLAPLALNHIVFNNLIQNDSLILKCITTILDEYHNKEVGYELSIKAN 153 Query: 151 TFYVI-NRLRHYREEQVIDDVPQWLKSTVEK------MHDKEQFSESALENMVALSAKSQ 203 + +I LR + ++ +D K ++EK + +++ + L+ + + S Sbjct: 154 IYQLIVLLLRSHIDKIYSEDEFIKRKYSLEKFECIFDLIEEKYMDKITLKELASRVNLSA 213 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 + R ++ GKT + IN IR++ A L+ T+ ++T+IA G+ S + F + FK+ Sbjct: 214 HHFCRTFKQITGKTTIDFINGIRLDKAIYYLKETDLNMTEIAMRCGFDSINYFSRLFKRN 273 Query: 264 TSFTPKSYRKKLTE 277 + +P YR + E Sbjct: 274 YNISPTKYRNEHRE 287 >UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=C7H3E2_9FIRM Length = 306 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 12/240 (5%) Query: 45 YEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNVGIS----KR 99 Y+ V +G+ +G ++ G V P +Y + + + K Sbjct: 68 YQILYVASGKAHFWFDGVEEVVTSGHMVLYQPKEIQKYVYYVEDHPEVFWIHFTGYDVKN 127 Query: 100 FFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLR 159 H +PL + F + + + +I L E G E+ + + ++ + Sbjct: 128 ILNYHGIPLDKHVFYSGTL----PDYKMLFRKIIRELQQCEYGYEDYIASLFNIILFLVS 183 Query: 160 HYREE--QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKT 217 ++E + +P+ +++ V ++ ++ ++++ S + R ++Y + Sbjct: 184 RQQQESEKTTTSIPEEIEAAVAYFNENYN-TKVSVDDYAESLHISTNWFIRNFKQYMKIS 242 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 P Q I +R+ A+ LE T Y++ +IA GY +P F + FKK +P YRK L E Sbjct: 243 PAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDNPLYFSRVFKKEYGVSPAQYRKNLEE 302 >UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax=Enterobacteriaceae RepID=RHAS_SHIF8 Length = 278 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 110/279 (39%), Gaps = 10/279 (3%) Query: 11 IATAREQQLFNGKNFHVFIYNK-TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 + F N V I + ++ H HD++E +V G NG+ + G Sbjct: 1 MTVLHSVDFFPSCNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG 60 Query: 70 DFVFIPLGSHH--QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA--SQVYRTNNAF 125 F+ H + T +L + F LLP +R N++ Sbjct: 61 TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV 120 Query: 126 LTYVETVISSLNFRETGLE----ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 L V +++ + +E + E++ ++ LR ++ +++ L + + Sbjct: 121 LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL 180 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 D E + + + S L R ++ G TP + +N +R+ A+ L + SV Sbjct: 181 ED-HFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASV 239 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 TDIA+ G+S + F F++ +++P+ R+ F Q Sbjct: 240 TDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ 278 >UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR68_9FIRM Length = 301 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 99/285 (34%), Gaps = 24/285 (8%) Query: 12 ATAREQQLFNGKNFHVFIYNKTE-----SISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 T RE + + Y + H H EF V G + G R +L Sbjct: 14 ETLRETASHGSEEYPFCYYYEDIWDFDFHCIDWHWHPEVEFVYVQQGMADFLVGGNRYVL 73 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRF--------FEQHYLPLLPYCFVASQV 118 GD +FI H+ F + I N+ S + ++ P++ Sbjct: 74 SSGDGIFINSQVIHR-FEATDSAIIPNIVFSPVLLAPQGSLIYSRYIRPIIESTTECVIF 132 Query: 119 YRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID---------D 169 A + +ET+ S + +G ++ + Y + D Sbjct: 133 SAEETAHRSIIETMRSVFAVQGSGTASEMKTAELLLKLWRLLYESILITDCGSMSVHSAQ 192 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 L+ ++ +HD + L+++ S+ + + Y +P+ + E R+ Sbjct: 193 TQAKLQIMMQYIHDNYS-GQITLDDIARTVLISKSSVLNIFRTYLHTSPINYVVEYRLKC 251 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A K L T SV IA E G+ + F + FKKL TP YR Sbjct: 252 ASKLLVDTENSVCTIAHETGFENIGYFCRRFKKLYGVTPIYYRNH 296 >UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales RepID=A6LH31_PARD8 Length = 293 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 106/273 (38%), Gaps = 20/273 (7%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ--- 81 H ++ + I H H E + +G + + GD I H+ Sbjct: 16 IHFYVEDLPHFIVPWHYHPAIEIMYITSGTGTRFVGDHVEGYFEGDVCMIGPQLPHEWRN 75 Query: 82 ---SFYEFGATR--ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN--AFLTYVETVIS 134 F + R + + ++ FE + + L + + R+ F+ I+ Sbjct: 76 DPVYFDKSSGLRATCICLFFKRQIFEPNLIRLPEMNNIRELIERSRRGIKFVGKSRKKIA 135 Query: 135 SL---NFRETGLEELVEMVTFYVINRLRHYRE-------EQVIDDVPQWLKSTVEKMHDK 184 L + ETG +++++ + E + ++ + V K K Sbjct: 136 ELISQSANETGASRVIKLIALLELMATSEEYEILASTGFTETVNSDDFERFNKVYKYLVK 195 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 S LE + AL + R ++ KT ++ +N++RI AKK L N ++ I Sbjct: 196 NFTSPVKLEEVAALVGLTPTAFCRYFKKRTKKTFVEYLNDMRIGHAKKLLIEGNLKISTI 255 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + EAG+++ S FI FKK T+ P Y+KK E Sbjct: 256 SSEAGFNNLSNFIGQFKKTTNMLPSEYQKKYKE 288 >UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D21 RepID=C0WDW3_9FIRM Length = 311 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 104/274 (37%), Gaps = 12/274 (4%) Query: 14 AREQQLFNGKNFHVF-----IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 A+E+ ++ + +H H + V G +NG L+R Sbjct: 27 AQEEIWYSQNEIPIAMFTQRYQPHLGDHIPIHWHQEMQLLWVYDGTLSYRVNGMEFPLDR 86 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFF-----EQHYLPLLPYCFVASQVYRTNN 123 +FI H S + L + K F Q PL + ++ N Sbjct: 87 SQLLFINDSILHSSHPITTEVKTLCINFRKDIFPSALWNQFLRPLTENPYCTYELINLNA 146 Query: 124 AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD 183 L + I ++ TGL + + + + + E + + + Sbjct: 147 QSLEKLGRFIHHVD-DSTGLFSVTTFIMEVMEEIMETFEESGEAKNTEERVLFDGILSFI 205 Query: 184 KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 K+ FSES + + + ++ LT Q+Y G P+ +N R++ A+ QL + SV+ Sbjct: 206 KDHFSESLTISQLSTAAHLNKNKLTALFQKYTGMPPIHFLNTYRLDEARTQLLKSARSVS 265 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +I+ + GY S FI+ F+K TP YR+ + Sbjct: 266 EISEDVGYGQISHFIQQFRKRYGMTPLQYRRTYS 299 >UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=B0P341_9CLOT Length = 282 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 10/258 (3%) Query: 25 FHVFIYN--KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 F +F++ I H H E V G +N + LLE GDF+ + H S Sbjct: 17 FKMFLFEGRDGNYIREKHWHRSIEIFAVFQGTLGFYLNDQEYLLECGDFIIVNSNEVH-S 75 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETG 142 + + + + FE++Y CF A + + + + + + + G Sbjct: 76 IHAPKENMTVVLQMPLNMFEKYYTGDQFICF-AHAPQAQDEQLMEMICEMYMAYSDKHCG 134 Query: 143 LEELVEMVTFYVINRL-RHYREEQVIDDVPQWLK-----STVEKMHDKEQFSESALENMV 196 + ++ + + ++ + YRE V D+ K S + + E +L + Sbjct: 135 YDLKIQSLFYDMLYLMVTRYREINVHPDILHQHKQLTKLSVITDYMKEHYKEELSLSKLA 194 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 + S YL+R Q+Y G + IR +QL T+ +++DI+ E G+ + F Sbjct: 195 EIFGYSPSYLSRMFQKYAGINYKDYMQAIRTEHGYRQLVETDMTISDISMENGFPNNKAF 254 Query: 257 IKTFKKLTSFTPKSYRKK 274 K F K P +RK+ Sbjct: 255 SKAFYKKYGIMPAEFRKR 272 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 93/257 (36%), Gaps = 9/257 (3%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + Y S H HD+ E V++G L+ +F I H Sbjct: 17 IYCDRYEDYRQFSPRHWHDHIEIIYVVSGSLQVVCGENEYTLKENEFFVINSNKIH-GTQ 75 Query: 85 EFGATRILNVGISKRFFEQHYLPL----LPYCFVASQVYRTNNAFLTYVETVISSLNFRE 140 + R+L V I + + + C+ R + ++++ + Sbjct: 76 SYERVRVLLVQIPYAYLDSYIDDYGQIRFRECYETENGSRKYEQMKSLLKSIAHIYRKKG 135 Query: 141 TGLE----ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 G E V + + + + V + K AL+ Sbjct: 136 KGYELRLMAKVNEFLYILFTNYSYKEMNAGKESRQIARLKDVLRYVAKNYQEPIALKEAA 195 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 +++ +Q+Y R ++ G T ++ +N++RIN ++L T S+TDI G+++ +F Sbjct: 196 DIASLNQDYFCRMFKKCMGVTFLEYVNQVRINHIHEELLATEDSITDILEHNGFTNYKVF 255 Query: 257 IKTFKKLTSFTPKSYRK 273 + FK TP+ RK Sbjct: 256 SRMFKAQFGMTPRELRK 272 >UniRef50_UPI0001789626 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789626 Length = 305 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 112/285 (39%), Gaps = 34/285 (11%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN----GKR 63 P +Q N + HQHD E +++G ++ K Sbjct: 16 VPRFYAYYYKQWMNYE-------------MPYHQHDSTEIMYMISGVCRIDVKAGDTEKS 62 Query: 64 VLLERGDFVFIPLGSHHQSFYE-FGATRILNVGI----------SKRFF--EQHYLPLLP 110 V+L++G+F+ + G H+ + + R+LNV S R E+ + L Sbjct: 63 VILKKGEFMVLDAGVPHRLIVDQAASCRMLNVEFGFMESEGMAPSLRHIVGEEEEVSFLL 122 Query: 111 YCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV 170 V +++++ L+ R T + + ++ + EE+ D+ Sbjct: 123 KRPFRYLVLADQEEVYPVLKSLVLELDQRGTDGRMMTHALFIQLLVCIARLYEERERSDM 182 Query: 171 PQ---WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 Q ++K +V+ +H + ++++ A YL R +R G+T + + IR+ Sbjct: 183 QQSDFYIKRSVDYLHQNYD-RQIQVKDVAAEVNLHPGYLHRVFRRGTGRTITEYLTTIRM 241 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 AK LE T+ + +I+ G S F FKK T TP YR Sbjct: 242 EKAKMLLEQTDIPIHEISDYVGVGSRQYFHMLFKKYTGSTPVEYR 286 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 101/274 (36%), Gaps = 15/274 (5%) Query: 18 QLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 Q +F +F Y E + H H YE T++L + + E GD V + Sbjct: 9 QPLPESSFRIFGYEVKEFDAPWHYHPEYELTVILQSEGIRYVGNSMESFEAGDLVLLGPN 68 Query: 78 SHHQ---SFYEFGATRILNVGISKRFFEQHYLPLLPYCFV------ASQVYRTNNAFLTY 128 H + G + V F +L + + + A+Q R N Sbjct: 69 LPHCWKNTPDSVGPASSIVVQWPAEFMGSGWLNVEEFKSIRRLLQLATQGVRFNQEVSAR 128 Query: 129 VETVISSLNFRETG------LEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMH 182 V +++++ + LE L + T I+ L ++ +TV Sbjct: 129 VLPMLAAMLDMQPFPRLMKFLEILELLATVKSIHLLCEQGFTHPLNYEDNQRINTVYNYI 188 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + L + L S+E +R R K +NE RIN A K L T+ V Sbjct: 189 REHYAERITLATLAGLVHMSEESFSRFFSRTMQKPLFTFLNEYRINMASKMLIETDMQVA 248 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +I+F GY SP F + F+K TP +YR + Sbjct: 249 EISFACGYESPPFFFRQFRKFGGITPAAYRNQFR 282 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 22/267 (8%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + I LH HD +F L+L G +IN +++ + GD +FI G H + Sbjct: 26 YKTTINQNINGYIPLHWHDEIQFVLILKGIALFQINEEKIEVHEGDGLFINSGYLHMAEE 85 Query: 85 EFGATRIL-------NVGISKRFFEQHYLPL-----LPYCFVASQVYRTNNAFLTYVETV 132 + G+ + +S+ + + P LPY F+A N L V+ + Sbjct: 86 KEGSDCTYICLNVSPHFVLSQELYSSYVQPYMFSTNLPYLFLAGNQQWAKN-ILDAVKKI 144 Query: 133 ISSLNFRETGLEELVEMVTFYVINRL------RHYREEQVIDDVPQWLKSTVEKMHDKEQ 186 + + + E + M + L Y + ++I +K + +H Sbjct: 145 NQLIQQKTSLYEIDITMQLTLMWKNLVVNGFQLEYDQSEMIK--SHRMKQMLNWIHL-HY 201 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + LE++ S+ R +R KTP++ + + RI + L+ +VT++++ Sbjct: 202 VEKITLEDIAKAGQLSRSECCRYFKRMLNKTPLRYVMDYRIQKSLLLLQHPESNVTEVSY 261 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + G++S S FI F++ + TP SY+K Sbjct: 262 QVGFNSTSYFISKFQQAMNMTPLSYKK 288 >UniRef50_C0EDG4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDG4_9CLOT Length = 334 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 93/255 (36%), Gaps = 21/255 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H+ +E + G ++ GD + + H+ ++N+ I Sbjct: 73 LHNHNCFELAYMYRGSCTNYFENGCFTMKEGDILLLNPNIRHEIRTAGPHDILVNLIIEP 132 Query: 99 RFFEQHYLPLLP-----YCFVASQVYR-------------TNNAFLTYVETVISSLNFRE 140 FE L F AS +Y + + ++ + Sbjct: 133 ALFESFMSSQLSGNQLMLNFFASYIYNVGQSRDYFYFSQIKDQTAYRMLNALLLEYCEQP 192 Query: 141 TGLEELVEMVTFYVINRLR-HYREEQVIDDVPQWLKSTVEKMHD--KEQFSESALENMVA 197 + + E + +++RL Y E+ +D S + ++ +E ++ LE + Sbjct: 193 VYWQNVCESLLAILLSRLSVAYSEQIGLDPASPENSSAIIEILSFMREHCVDAKLETVAK 252 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S ++TR +++ GKT ++++ R+ K L T+ S IA Y+ S Sbjct: 253 EFNYSPGHITRLIKQHTGKTFIEVMQNFRLEKVKHYLINTDLSAEKIARLTRYNDVSYLY 312 Query: 258 KTFKKLTSFTPKSYR 272 K FKK T YR Sbjct: 313 KLFKKKYGLTLSEYR 327 >UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D00 Length = 291 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 113/285 (39%), Gaps = 26/285 (9%) Query: 15 REQQLFNGK-NFHVFIYNKTESISGL----HQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 ++ F G F + + +T+ L H HD YE V G+ I K + + G Sbjct: 3 PLRKPFQGDPLFPMEMVYRTKKSPQLELPHHLHDLYELVYVYQGKGTFFIENKLMEKKEG 62 Query: 70 DFVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYLPLLPYCFVA------------S 116 D IP + H SF + + + + + L Y ++ Sbjct: 63 DLFIIPGNTIHSSFPDPDQPIVSSALFFAPSLVLGANGSDLQYSVLSCFEYAQKTGSYRH 122 Query: 117 QVYRTNNAFLT-YVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV----- 170 Q+ +N A++ ++ + + + G E + + ++ + Y + Sbjct: 123 QLPESNQAYIEDMLKGISEEIRLAQLGFREALVLQLRSLLLHINRYISTLSAEQTAHSQI 182 Query: 171 -PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 P WL +++ +H+ L + A +A + +R ++Y G ++ RI Sbjct: 183 GPAWLMDSIQWIHE-HLDQPIGLAALSAQAAVDPAHFSRMFKKYTGLHVTGYMHAKRIAR 241 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 AK+ L SV IA GY++ + F + FKKLT TP +YR++ Sbjct: 242 AKELLRNHEASVGQIAEICGYATLTHFHRNFKKLTGMTPGAYRRQ 286 >UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIK7_9CLOT Length = 343 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 103/275 (37%), Gaps = 23/275 (8%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 H + Y S H HD++E + V G+++ + + + + V + + H + Sbjct: 62 LHDYRYVHFGPPSHPHNHDFFEMSYVYKGQFYNRVENQDIEQKENTLVLLSPRAVHSCYI 121 Query: 85 EFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVYRT-----------NNAFLTY 128 + N+ I + E+ +L + F +Y N ++ Sbjct: 122 REKTDIVFNILIKRSLVEKIFLRMFSEESAVSRFFLDSIYNIHQKKPYLVFHCNEELVSL 181 Query: 129 VETVISSLNFRETGLEELVEMVTFYVINRLRHYRE-----EQVIDDVPQWLKSTVEKMHD 183 V +I ++ + ++ + + L + E + + + ++ + Sbjct: 182 VHGIIREHFDQKLFSQNMIIAKLIELFSELSRLFQITLQGESPLPETSSNISEILDYI-- 239 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 + +S L ++ S Y++R + + ++ I++ ++ A + L ++ V Sbjct: 240 ENNYSSVTLTSVAEHFNYSPSYVSRIIKTHLNQSFASIVHNKKLENACRYLSASDLPVEQ 299 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 + GYS S F K FK+ +P+ YR + + Sbjct: 300 VIEIVGYSDVSHFYKIFKQKYGLSPRQYRTQSNKL 334 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 97/261 (37%), Gaps = 26/261 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILNVGISK 98 H HDY++ V G + + + + +GD IP + H S I Sbjct: 47 HCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFMP 106 Query: 99 RFFEQHYLP------LLPYCFVASQVYRTNNA-------------FLTYVETVISSLNFR 139 F + + F+ + + NA ++ ++ R Sbjct: 107 SFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYERR 166 Query: 140 ETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-----HDKEQFSES-ALE 193 + ++ +++ L +++ + + + E M H + E L Sbjct: 167 TPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMNLN 226 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 ++ +LS S+ + + GKT + + ++RI A L+ SVTD+ + G++ Sbjct: 227 DLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFNEL 286 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 S F + FKK T +P +RK+ Sbjct: 287 SYFCRIFKKYTGISPTDFRKQ 307 >UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enterococcus casseliflavus RepID=C9A5Y7_ENTCA Length = 279 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 88/256 (34%), Gaps = 2/256 (0%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + + K LH HD + V G + I+ +++LL + + + I H + Sbjct: 25 YQRCLQQKRGDQLPLHWHDELQIVWVEEGSFVYTIDDEQILLNKNETIIINSRVLHGAVL 84 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLE 144 R S F V + LT +E Sbjct: 85 ASENVRYCCFDFSSGFIADPVFKEAIEQLVHDRTRSYRRLTLTAQHQAFVQTVRLPLLIE 144 Query: 145 ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 + + ++ L + + + + +H+ Q + + +A + Sbjct: 145 QRFTLYELFL-AALSQLMAARPASPKKETIYLMLAFVHEHYQ-EPLTVPAIAKAAAINTR 202 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 T ++Y TP+ + + R++ AK L T ++ I + G++ S F K F++ Sbjct: 203 TCTALFRQYTTLTPINYLIDYRLSQAKNLLIETEEPISTICYHVGFNHLSYFSKRFQRKF 262 Query: 265 SFTPKSYRKKLTEFNQ 280 TP YRK E ++ Sbjct: 263 GLTPLQYRKTYREDDR 278 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 11/256 (4%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS-FYEF 86 F ++ + S +H H + E V++G N ++ L RGD V IP + H + Sbjct: 25 FSKDEGDWKSIMHTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEHTERSSQN 84 Query: 87 GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEL 146 +GI F F + + + ++ + + G + + Sbjct: 85 HPLEYYVLGIDGISFLSQKDRECAQVFCN---FEHDPSIHELFRQMLYEIRTAQYGSQTI 141 Query: 147 VEMVTFYVINRLRHYREEQVIDDVPQWLK-----STVEKMHDKEQFSESALENMVALSAK 201 + + L+ R +Q+I ++ + +++ D L+ + L+ Sbjct: 142 CQHLLEI--LILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTLTGLTHM 199 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 ++ Y+ + +Y G +P+Q +N+ R+ A+ L+ TNYS++DIA G+SS S F + F+ Sbjct: 200 NKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYFTQIFR 259 Query: 262 KLTSFTPKSYRKKLTE 277 K + TP YR++ + Sbjct: 260 KNFNMTPVKYRQEHAK 275 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 97/255 (38%), Gaps = 11/255 (4%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS-FYEFGAT 89 N + S+ H+H Y+E +L G ++ +++GD + + H + E Sbjct: 24 NGSSSMPRPHEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDLHSTASSEKLLF 83 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQ-----VYRTNNAFLTYVETVISSLNFRETGLE 144 + +G S+ F EQ + + + + ++++ +T Sbjct: 84 ERVLIGFSRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSMLAECQTEQTHYS 143 Query: 145 ELVEMVTFYVINRLRHYR-----EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 LV + ++ RL + + S + + + LE + Sbjct: 144 SLVRSLMNELLIRLHRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFHEKLTLEQVAKQF 203 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S YL+R R G + + +RI A+K L + SV I+ AG+ + F KT Sbjct: 204 YISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAGFEHIAHFNKT 263 Query: 260 FKKLTSFTPKSYRKK 274 FKK+ TP YRK+ Sbjct: 264 FKKIAGTTPLQYRKR 278 >UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C6D193_PAESJ Length = 833 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 85/257 (33%), Gaps = 8/257 (3%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 + V ++ + H H E VL G ++ ++ L D + I S H+ Sbjct: 13 DLPVRLFVNSVKDIRFHWHKEIELIYVLQGAVTVYVDQRQYRLAEDDIIAINSMSVHKLE 72 Query: 84 YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN-NAFLTYVETVISSLNFRETG 142 +L + + ++ R + + ++ N + G Sbjct: 73 CTNLDNVLLTLQFGPELLDDEGTLFDCNSMSQTEYNRYRYDRLRRCLARMVWESNKKGPG 132 Query: 143 LEELVEMVTFYVINRLRHY-------REEQVIDDVPQWLKSTVEKMHDKEQFSESALENM 195 +I L Y + D + + + DK + L+ + Sbjct: 133 HRNYSMGSLQTLIGHLTRYFTAGTNGGPREKGKDYDYMRLNRIIQYVDKHYNEKITLQTI 192 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S Y + G + + IR+ A QL T+ S+T IA + G+++ L Sbjct: 193 ADQEHLSLHYFSHFFSDKIGIPFQKYLTLIRLEKAAAQLSDTDKSMTQIALDCGFANVKL 252 Query: 256 FIKTFKKLTSFTPKSYR 272 F + FK TP SYR Sbjct: 253 FNQYFKGKYGSTPGSYR 269 >UniRef50_C0ECP6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP6_9CLOT Length = 313 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 102/260 (39%), Gaps = 25/260 (9%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS-FYEFGATRILNVGI 96 H HD++E V TG ++ + + L+ GD + + H E T I N+ + Sbjct: 52 PFHSHDFFELVYVHTGCCVNLVDDQEIPLKEGDICLLNTHAFHTLRCSEPDHTIIFNLLV 111 Query: 97 SKRFFEQHYLPLLPYC-----FVASQVYR--------------TNNAFLTYVETVISSLN 137 K + LL Y F + + + + +I+ Sbjct: 112 GKEVLSSSHFQLLSYNDFVANFFLNSLQKQRAEKNYIVFSKQSEEEKCTELCQQIITEYY 171 Query: 138 FRETGLEE---LVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESAL 192 E L + L+ + +I +R+Y+++ + + K + ++ + E L Sbjct: 172 ENEGALYQESKLIYLFDCLLIELIRNYQQQHNLSIGKKSTKYKISEVIEYMGEHCDTITL 231 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 +++ ++ +R + G+ +++ ++R++ AK LE + S+T + + GY + Sbjct: 232 QSLADHFCYHPKHFSRILRETTGQNFSELLTDLRMSRAKALLEDSQLSITKVMNQVGYHN 291 Query: 253 PSLFIKTFKKLTSFTPKSYR 272 + F F+K P YR Sbjct: 292 YTWFGNQFQKQFGKAPSEYR 311 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 104/269 (38%), Gaps = 19/269 (7%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF 86 + ++ T ++H+ +E + G+ EI G + D + I H+ + Sbjct: 30 IERFHDTSWHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKFIVKS 89 Query: 87 GA-TRILNVGISK-RFFEQHYLPLLPYCFVA-----------SQVYRTNNAFLTYVETVI 133 + + + F+ Y + F+ + N + + ++ Sbjct: 90 ESGCEFIVLSFKFVNRFDGQYSDVSLENFLDFVSGKETGPFITLKVSQKNDIIVLLNRIL 149 Query: 134 SSLNFRETGLEELVEMV---TFYVINRLRHYREEQVIDDVPQWLKSTVE---KMHDKEQF 187 + G E L ++ F +I+R E I + +K ++ + Sbjct: 150 KERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYE 209 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + +L+++ S Y TRA + G +P+ + +IR+ AK+ L+ T+ ++DIA Sbjct: 210 RDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALS 269 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G+S+ F FKK TP YRK + Sbjct: 270 VGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0C8_RUMGN Length = 301 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 104/262 (39%), Gaps = 20/262 (7%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR---I 91 + H H+ YE + G N + +++G + + H + T Sbjct: 25 DMRSNHFHNEYEIYFLTEGERLFFFNNRAYQVKKGSLILVDTNLIHMTHAPEDDTTGYTR 84 Query: 92 LNVGISKRFFEQH-----YLPLLPYCFVASQVY----RTNNAFLTYVETVISSLNFRETG 142 + + I K +Q +L L+P+ VY + FL E + + + R Sbjct: 85 IILYIDKFKMQQFDEKFPHLNLVPFFREHYGVYNLTQKQQEKFLHMYEVLKTEFSNRSRS 144 Query: 143 LEELVEM-VTFYVINRLRHYREEQVIDDVPQWLKS-------TVEKMHDKEQFSESALEN 194 + L+EM + Y I+ +R E I D KS + +L+ Sbjct: 145 YKALIEMEIIHYFIDFIRDNPELTPIKDETAIHKSSKYQTIYNIADYISDHYAESISLDG 204 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + + S+ YL+R+ + G + +N +R AK+ LE T SV++IA GY S + Sbjct: 205 LAGVFYLSKFYLSRSFKEVTGYGVNEYVNILRTKRAKQLLEETTLSVSEIAGTVGYESIT 264 Query: 255 LFIKTFKKLTSFTPKSYRKKLT 276 F K FK S +P YRK L Sbjct: 265 YFEKVFKTYMSISPLKYRKTLN 286 >UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQZ7_9FIRM Length = 296 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 106/286 (37%), Gaps = 27/286 (9%) Query: 14 AREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 REQ + +F V Y+ + +H H Y+E +G ++ + LE Sbjct: 9 LREQIPPDILDFPVAFYSDELADLPDRAGPVHWHPYFEIATAQSGVLDYQVGQTHIRLEP 68 Query: 69 GDFVFIPLGSHH--QSFYEFGATRILNVGIS--------KRFFEQHYLPLLPYCFVASQV 118 GD +F+ H + + + S + ++ P+L + V Sbjct: 69 GDSIFVNQNMLHGIRQLSGAAPDPLPILVFSGTVVAPEHSAVYRKYIQPVLGCSTLPFVV 128 Query: 119 YRTNNAFLTYVETVI----SSLNFRETGLEELVEMVTFYVINRLRHYREE-------QVI 167 +R ++ V I ++ R E V+ V+ + + + +V Sbjct: 129 FRHDSDLWQAVRQQIHRACDAMRERPACYELTVQRSLCSVLEAIFRHLDSLPPLPSSRVQ 188 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 L+ + +++ L ++ A + S+ R Q Y G +P++ + + R+ Sbjct: 189 LTAQIRLQKMLSYLYE-HYAQPVTLADIAAAAHISRSEAGRCFQAYLGCSPVEALIQYRL 247 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 A + L+ T+ + +I+ G+ S F + F+K P RK Sbjct: 248 QRAWRMLQETDMTQQEISLACGFHSVQYFRRQFRKRYGCAPGEKRK 293 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 103/267 (38%), Gaps = 14/267 (5%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + I+ + H HD E VL G+ I+ LE+G+ I HQ Sbjct: 12 LPIKIFVAKLNNYPPHWHDEIEIVKVLEGKIKVSISESVCFLEKGEMAIIKHKEIHQIQS 71 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL-------TYVETVISSLN 137 + + + I+ +F E H+ L F + + + + L + +I+ L+ Sbjct: 72 LENESLLQIIQINYKFMETHFPHLSRISFENNLLNISKDINLNVASNLKQLINEMINYLS 131 Query: 138 FRETGLEELVEMVTFYVINRLRHY-------REEQVIDDVPQWLKSTVEKMHDKEQFSES 190 R G E V + V + +E +++ + + ++ +E Sbjct: 132 VRNQGYEFHVISAIYKVFGSIISNVPYTISTEDELEKNNITFNRMKKIIEYIEQNYMNEI 191 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 + + + ++ Y+ +++ G + Q I +R+N A + L S+T+I G+ Sbjct: 192 NINTLAEILHLNKYYIAHFFKKHTGLSLGQYITNLRMNKATELLIKNEDSITNIILSCGF 251 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + F K F+++ +P Y+ E Sbjct: 252 KNIKYFYKVFREVYKCSPLEYKNNRQE 278 >UniRef50_C6IIU9 Transcriptional regulator n=2 Tax=Bacteroides RepID=C6IIU9_9BACE Length = 278 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 114/272 (41%), Gaps = 14/272 (5%) Query: 13 TAREQQLFNGKN--FHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 + + F N FH+ N T S LH HDY E V G +NG + L G Sbjct: 4 SVFKLSYFLSANEKFHIARVNITSSQDLSLHSHDYAEILWVEKGTGIHHVNGHQFRLSPG 63 Query: 70 DFVFIPLGSHHQSFYEFGATRILNV--------GISKRFFEQHYLPLLPYCFVASQVYRT 121 D + + H I+NV +R+FE L Q+ + Sbjct: 64 DLIMVRPKDRHTFSSSGKGIVIVNVAFPVETLDYFRQRYFEWSNLYFWTTGMFPFQMRLS 123 Query: 122 NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 + ++ + + ++ ++ + ++ ++ + + ++P WL + ++K Sbjct: 124 RDIVKRLSSRAEEAMKYGRSNIQ--LDSLLLFIFRQITANEKVEDSSEIPVWLFNAIQKF 181 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + E F + + V L ++ +Y+ R + ++ K+ +INE ++ +A QL +T+ + Sbjct: 182 NSPEFFIQ-GIAGFVTLCDRNIDYVNRIVKLHFHKSLTDLINEFKMQYATTQLSITSMPI 240 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +I G+ + F K F+ + + TP YR+ Sbjct: 241 KEICTNCGFRNLGHFYKIFRSVYNQTPYEYRR 272 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 116/282 (41%), Gaps = 18/282 (6%) Query: 9 PEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 E+ E L N + + +TE H HD+ EF +++ G+ I+GK +E Sbjct: 3 KEMYDITEGDL-NPEFLFTCVSTRTEEEQNYHAHDFIEFAVIMGGKGKFYIDGKDYEVEE 61 Query: 69 GDFVFIPLGSHHQSF--YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL 126 GDF+ + G++H+S Y + + S F+ P ++ + + Sbjct: 62 GDFILLNPGTYHRSKAGYSKEGLKECYIAFSGVSFKGCKSGYFPSFKGNGKIIKMADRMK 121 Query: 127 TYVETVISSLNFR----ETGLEELVEMVTFYVINRLRHYREEQVIDDV----------PQ 172 + + + +N G +++ ++ + ++E+ + + Sbjct: 122 KNIFQICTVMNKEARECSAGRYFMLKAYLIQILCLVVREQKEEKQEGEGKGYIFQSTGKK 181 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 ++ + K ++ + +LE + A S Y+ + + G TP+ + +R+ AK+ Sbjct: 182 YVVQQIMKYMEENYREKISLEQIAANMYLSSFYIAKIFKSETGDTPINYLIRLRMEKAKE 241 Query: 233 QLEMT-NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 LE++ + ++A GYS F K FKK +P Y+K Sbjct: 242 ILEISPEEPIKEVAAAVGYSDAYHFSKLFKKHYGISPLYYKK 283 >UniRef50_C5RQN6 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQN6_CLOCL Length = 696 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 13/264 (4%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + + ++ LH H+ E VL GR+F +I + L + I H+ + Sbjct: 12 LPMSVKLQSVKSYPLHWHNCLEILFVLKGRFFVQIESEIYELCEREIEIINADEPHRVYS 71 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQ---------VYRTNNAFLTYV--ETVI 133 E IL I FFE+++ + F + Y+ FL + E V Sbjct: 72 EDEDNLILVFKIHLDFFEKYFNDVKNIYFYTNSSDEGIQEEDKYQELRKFLAILACEAVQ 131 Query: 134 SSLNFRETGLEELVEMVTFYV--INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESA 191 ++ E E+LV+++ + + L + E + + V + K ++ + Sbjct: 132 QEEDYDEEVEEQLVKLLFHLLNNFHYLTYDEEVAIENQVQFQRYHRITKYIHDNYMNKIS 191 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L+++ + S YL+ + G + +N R+N + K L ++ +++DI+ E G+S Sbjct: 192 LQDIASREFLSSYYLSHEIKNMAGTNFIDFLNTTRVNESIKFLLDSDKTISDISEEVGFS 251 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKL 275 + K FK+L + TP YRKK Sbjct: 252 HTRYYNKYFKQLYNITPLQYRKKY 275 >UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6W3_9BACT Length = 256 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 102/249 (40%), Gaps = 11/249 (4%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 F ++ + + LH+H+ E ++ G I + + G+ + IP H+ Sbjct: 5 EFSYAGFHASTRSTPLHRHNGTELVYIVEGECENRIPFRDRKIAAGELLIIPPELEHRQI 64 Query: 84 YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGL 143 + G R V + P + + S R++ +++E ++ L ++E L Sbjct: 65 -DLGFVRTFYVVFEAK-------PGVFRNDLRSIDVRSDRFVRSWMEQLV--LLYQEQAL 114 Query: 144 EELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 ++ ++ + R ++P L + + + E A+ + A + S Sbjct: 115 DQCRLLLPALLARITRLEGSIDGTAEIPAGLAAAIRFITY-HFHRELAIREIAASNGMSP 173 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 Y ++ +P + I ++R+ A++ L + ++++I + GY + F + F+K+ Sbjct: 174 SYFNALFHKHMQVSPAEYIKKLRMGHARQLLRNSRLTISEIGEQCGYRNAYYFCRIFRKV 233 Query: 264 TSFTPKSYR 272 TP YR Sbjct: 234 HGCTPGEYR 242 >UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing protein n=12 Tax=Enterobacteriaceae RepID=B7MQA3_ECO81 Length = 289 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 89/252 (35%), Gaps = 12/252 (4%) Query: 39 LHQHD-YYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG------ATRI 91 +H H E L+ G I + + +GD V H + E G I Sbjct: 33 MHMHPQTVELILITEGDGEYFIGDRIYPVRKGDLVIYNSQVVHDEYLESGRPIGTICCGI 92 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVT 151 N+ + Y T ++ V TVI+ + +L+ V Sbjct: 93 NNISCPGLRENALIPDDIVPVIPLYHHYATVEKLMSSVFTVINQHAVEGPAMAQLLTQVV 152 Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 I R + L +++ D+ + L+ + S Y++ + Sbjct: 153 LKYIEGNVLLRTGNDAIQRHENLLDSIKSYIDRNFYEPIRLDTLATKFNVSPYYVSHEFK 212 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNY----SVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R YG +PM + + R+ A+ L T+ +T IA+ G+S+ S F FK T Sbjct: 213 RRYGYSPMDYLIKRRLGEAQSLL-TTDKGGREKITSIAYRVGFSNLSHFQNYFKNKVGKT 271 Query: 268 PKSYRKKLTEFN 279 P YRK + N Sbjct: 272 PGQYRKDYRKAN 283 >UniRef50_A8S1P5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S1P5_9CLOT Length = 309 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 18/255 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR-----ILNV 94 H H+ YE ++ G N + + GD + + H + IL V Sbjct: 30 HFHNQYEIFYIIEGERLFFFNNREYVARSGDLILVDTNLIHMTKSVTAEDTGHNRVILYV 89 Query: 95 GISK-RFFEQHYLPLLPYCFVASQ--VYRTNNA----FLTYVETVISSLNFRETGLEELV 147 + + F+ Y L F VY + FL + + ++ + + + Sbjct: 90 SYDRMKAFDGQYPSLQLVRFFHEHYGVYHLDKEQQALFLNFYRNLRIAMTEKAHNYKVGI 149 Query: 148 EMVTFYVINRLRHYREEQ-----VIDDVPQWLKSTVEKMHDKEQFSE-SALENMVALSAK 201 ++ T + ++ Y +Q D P++ + + E + +LE + A Sbjct: 150 DLETLTWLFKITSYVSKQEGASPHSSDHPKYRTAYAIADYLSENCEQNISLEELAAHFYL 209 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S+ Y+ R + G T + N RI AK+ LE T+ S+++IA E GY S + F + FK Sbjct: 210 SKYYVCRTFKEITGYTVTEYTNIHRIRKAKRLLEETDMSISEIAHELGYESLTYFERMFK 269 Query: 262 KLTSFTPKSYRKKLT 276 + +P YRK L Sbjct: 270 SFMTISPLKYRKTLN 284 >UniRef50_D2MNX8 Transcriptional regulator, AraC family n=1 Tax=Bulleidia extructa W1219 RepID=D2MNX8_9FIRM Length = 282 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 18/262 (6%) Query: 31 NKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA- 88 N+ E I L H H +EF +L G Y ++GK L GD I H+ + Sbjct: 15 NEIEEIDELAHWHHSFEFIEILEGEYQCHVSGKTFLAHPGDLCIINRSRIHRILNQKKER 74 Query: 89 TRILNVGISKRFF-------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN---- 137 R + +F +++ PL + + + + +I ++ Sbjct: 75 CRKKVLIFDPDYFIHNPEIYQKYVKPLQEETAFSHMQLKFKSGMGAELIHLIDEIDRLNS 134 Query: 138 FRETGLEE--LVEMVTFYVINRLRHYREEQVID---DVPQWLKSTVEKMHDKEQFSESAL 192 + G E + + L H+++E+++ D+ ++ + + L Sbjct: 135 EKPVGYEMETIGLIYLLLRRLYLAHHQQEKLLQENYDLNSTIQRKMTLYIYEHYAEHLTL 194 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 E + S+ R + Y GK+P+ +N R+ + + L+ ++ S+TDIAFE G+S Sbjct: 195 EKIAQAGLVSKSTCIRLFKEYTGKSPIDFLNRYRLEVSSQLLKNSHRSITDIAFECGFSQ 254 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S F + FKK +P YR++ Sbjct: 255 ASYFNRQFKKEYGSSPNQYRQQ 276 >UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B6C Length = 303 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 116/291 (39%), Gaps = 22/291 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 IN + A E ++ ++I + + H HD EF ++ G IN Sbjct: 8 INVDIMQDASEIVRYDETGIPLYIQTGELSRYPDRKALCHWHDDLEFIRIVHGEMNYYIN 67 Query: 61 GKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILNVGISKRFF-------EQHYLPLLPY- 111 GK ++L+ D + + H S L + + F +++ LPLL Sbjct: 68 GKNLVLKEHDGIMVNTRQMHYGSSINQNDCSFLCILVHPALFSSNRLIYQKYLLPLLEDR 127 Query: 112 --CFVASQVYRTNNAF-LTYVETVISSLNFRETGLEELVEMVTFYVINRL-RHYREEQV- 166 FV R ++ F L + + E G E + + + + L R ++ + Sbjct: 128 ETEFVYLDSGRPDHGFILDCLMEMTQLKEHGEYGYELEIIGLFYLIWRHLARQFKAGKTA 187 Query: 167 ---IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 I+D+ ++ + + + L + A + + ++Y ++P+ +N Sbjct: 188 APGIEDMDTKVQKDMVSFIYQHYTEKLTLSAIAASGGVCRSKCCQIFKKYLCQSPIDFLN 247 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 R+ + L+ T+ S+T+IA E G++ S + + F + TP+ +R + Sbjct: 248 SYRLEVSSHLLKKTDKSITEIATECGFNHLSYYSELFMRHYGCTPRQFRSQ 298 >UniRef50_C7GHR9 Transcriptional regulator, AraC family n=2 Tax=Lachnospiraceae RepID=C7GHR9_9FIRM Length = 273 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 103/257 (40%), Gaps = 6/257 (2%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF-VFIPLGSHHQSFYE 85 + + K H H+ E V G + + ++ GDF + P HH + Sbjct: 12 IVVEWKKTVHFPPHLHEAIEVVYVTDGDIELGVGQELYHMDEGDFAIVFPNVIHHYQVFG 71 Query: 86 FGATRILNVGISKRFFEQHYLPLLPYCFVAS--QVYRTNNAFLTYVETVISSLNFRETGL 143 +++ + + F +Y L Y + + + + ++ + + Sbjct: 72 KKENKVIYLYLDPTLFPSYYKELQIYSPKNPVVKKEQVHPDVVNAIKYLAGITEGNPMLI 131 Query: 144 EELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 + V+M+ +V + + V D + + VE + K + +LE M S+ Sbjct: 132 QAYVQMILAHVFAEMPMVDKSTVGSD--DLIYNAVEYV-AKNFREKISLEKMAYDLCVSK 188 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 L+R + + + +N +R+N+A LE T S+T+I + G+ S F + FK Sbjct: 189 YVLSRMFAKTFHCNFSKYVNGVRLNYAVAALENTMDSITNICLDCGFESQRTFNRVFKDR 248 Query: 264 TSFTPKSYRKKLTEFNQ 280 TP+ YRK++ N+ Sbjct: 249 YKITPREYRKRMEHNNR 265 >UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQ90_9FIRM Length = 295 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 17/254 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISK 98 H HD EF +L G+ I K + RGDF+ I + +S G R + I Sbjct: 42 HWHDELEFIYILDGKMDFHIEEKILTASRGDFLAIHASAMRRSAPHNGEDCRFIRALIHP 101 Query: 99 RFFEQH-------YLPLLPY----CFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV 147 ++ PLL CF+ + + G E Sbjct: 102 SLLTENQSVRNRLLSPLLGNTSRRCFLVPSASPDAPRRGELLREINRINEKHLPGFELES 161 Query: 148 EMVTFYVINRLRHY--REEQVIDDVPQWLKSTVEKM--HDKEQFSE-SALENMVALSAKS 202 + ++ RL E+Q +D+P S +M + + E +L + A + S Sbjct: 162 IGLLHILLARLYALFPPEKQTQEDMPGTDISAQRRMVAYISHHYPEKISLAGIAAAGSVS 221 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + + ++Y ++P+ +N R+ ++ L+ T S+ +IA G+SS S + K F + Sbjct: 222 RSKCCQLFKKYMQQSPIDFLNRYRLEISRNLLDSTENSILEIANACGFSSQSYYTKMFSE 281 Query: 263 LTSFTPKSYRKKLT 276 + TP YR +L+ Sbjct: 282 KFNCTPTQYRSRLS 295 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 106/288 (36%), Gaps = 24/288 (8%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVL 65 AP ++ E+ N F VFI E H H Y E V++G + + + Sbjct: 11 KAPAHHSSIEEHFHNQ--FPVFINRWEEGFDLREHDHAYLEIVYVMSGEGYHYVADEVNK 68 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRIL--NVGISKRFFEQHYLPLLPYCFVASQVYRTNN 123 +G IP+G+ H A R+L N+ I + + + L YC ++ + Sbjct: 69 TSKGSLYIIPIGTSHIFRPNGTANRLLVYNLCIRPDWIGELGVWLSQYCRDTDVLHVLDG 128 Query: 124 AFLTYV-------------ETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQV---- 166 TY+ E + G E V ++ R+ + Q Sbjct: 129 NPGTYLFLRDTPLELAPSFEQLHREFTEESWGFETTVLAGLLQLLTRISRKLKTQDSTGD 188 Query: 167 -IDDVPQWLKSTVEKMHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + + H +E +E + + SQ + R ++ G + + Sbjct: 189 QTTGSTRHSEFVSIVEHINRHIAEPLKMEQLADQAGISQRHFIRLFRQQTGMGFSEYVQN 248 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 R+ A + L T+ SV DIA + GY P+ F + F+K+ TP YR Sbjct: 249 KRVELACQLLTGTSQSVADIAKKVGYQDPAHFREVFRKVMGITPSQYR 296 >UniRef50_C0FPB8 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPB8_9FIRM Length = 304 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 27/278 (9%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 H+ K ++ H H Y E L+G + +NG GDFV I HQ Sbjct: 21 HIEKAEKPGNVFFAHFHYYIEMLYALSGHFRIYLNGIYHEFAAGDFVLINSREVHQIDAL 80 Query: 86 FGA----------TRILNVGISKRFFE-QHYLPLLPYCFVASQVYRT------NNAFLTY 128 ++ G+++ FE ++ LP + + +V + ++A Sbjct: 81 SSEGGSYIVVRFLPELIYDGMTQSHFELKYLLPFITENSIYEKVISSSILNAKHSAIPGL 140 Query: 129 VETVISSLNFRETGLEELVE----MVTFYVINRLRHYREEQVIDD-----VPQWLKSTVE 179 + +I ++ G E ++ + +++ EE +++D + Q L + Sbjct: 141 MNEIIRESEEKQYGYELAIKNHIGGIFLWLLRYWHANGEEPLLEDFENQQLKQQLSPALT 200 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 M + S + M L S Y +R+ R +NEIRI A+K L T Sbjct: 201 YMITNYEKS-ISAAEMAKLCNLSYSYFSRSFNRLLHMNFSDYLNEIRIREAEKLLVSTTQ 259 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 +VT+IA G+ + S FIK F K +PK Y+K++ + Sbjct: 260 NVTEIASAVGFCTTSYFIKQFTKYLHVSPKQYQKQMRQ 297 >UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969E72 Length = 291 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 105/273 (38%), Gaps = 20/273 (7%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 E++ F +N H+ + GLHQ +E + V+ G + I G+ V IP Sbjct: 5 ERRSFTFENVHLAPDEQI----GLHQQSTWELSYVIVGSGMRLIGDMTEPFLGGEVVMIP 60 Query: 76 LGSHHQSFYEFGATR------ILNVGISKRFFEQ---HYLPLLPYCFVASQVYRTNNAFL 126 H ++E T + V F ++ + L + + Y Sbjct: 61 PEIPHCWYFEDDDTDEQGRIANITVTFDNDFLDRCSGTFPELCGHIDKLKKKYDAVKFDK 120 Query: 127 TYVETVISSLNFR--ETGLEELVEMVTFYVINRLRHYR----EEQVIDDVPQWLKSTVEK 180 E +I L ++ E + M+ +I + Q ID + + + ++ Sbjct: 121 EKSEAIIDLLEEMCNQSEAERVASMIKLILIMADSGSEHVVGKYQRIDKETKRM-NQIQT 179 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + L+++ ++ ++ GKT + +NE RI A + L+ + Sbjct: 180 YVICNAKRDITLDDVARYVGMNRASFCIFFKKATGKTFVTYLNEYRIGLACQLLKQKRMT 239 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 V++I + G+++ F +TFK+ +P Y++ Sbjct: 240 VSEICYNVGFNNVPYFNRTFKRHKGVSPCEYKQ 272 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 103/248 (41%), Gaps = 9/248 (3%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-RI 91 T+ S H H++ EF + G + + + ++ D + + H Sbjct: 54 TDWKSLPHSHNFAEFFYITNGSGQFSVEKEILDVKANDLIILNPTIVHTEISNPSKPMEY 113 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVT 151 + +GI F+ Y + S ++++ Y ++ + + + + + Sbjct: 114 IVLGIEGIKFQ---AEDQGYILLNSSAHKSD--LHLYFNSLAHEMKSEQPYRNFVCQNLL 168 Query: 152 FYVINRLRHYR--EEQVIDDVPQWLKSTVEKMHDKEQFSE-SALENMVALSAKSQEYLTR 208 + + + ++ + + K + +E + E +E + +L ++ Y Sbjct: 169 NIIFTMILRNDAFKISIVSGPKLTRECNIAKKYIEENYQENITIETLSSLVHLNKYYFVH 228 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 ++ +G +P+ + + RI + L TN+S++ I+ G+SSPS F + FK++T+ TP Sbjct: 229 NFKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAFKRMTNITP 288 Query: 269 KSYRKKLT 276 + Y+K Sbjct: 289 QEYKKMYK 296 >UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A3T9_ENTGA Length = 296 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 16/251 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG--ATRILNVGIS 97 H H E + G + I K ++ G V I H +F R+L + + Sbjct: 32 HWHSECEIQYFIEGNRYFLIGEKTYKIQPGTLVMIHPDCVHNTFSGKYIYHDRVLVLYEA 91 Query: 98 KRF---FEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN----FRETGLEELVEMV 150 +F + + L + + + A +YV+T+++ + +E + +VE Sbjct: 92 SKFPRIAQSMGIDLETFFLKHHGIIQIPPADRSYVQTLLAKIADEVIHKEYNYQVMVETK 151 Query: 151 TFYVINRLRHYREEQVIDDVP-------QWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 + ++ + + + D P L + + + S +LE + + + Sbjct: 152 LIELFIFIQRIKNFRGLSDEPAESLGKQSELVNQIAAFIRRNYASIHSLEQIASSFYLDK 211 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 YL R +R G T + N RI +++ LE T++ + +IA ++GYS+ + + + FKK Sbjct: 212 SYLCRIFKRATGYTITEYTNIQRIRQSQRLLEDTDWDIAEIARKSGYSNITYYNRVFKKY 271 Query: 264 TSFTPKSYRKK 274 T +P YRKK Sbjct: 272 TETSPLQYRKK 282 >UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYV7_CLOB8 Length = 303 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 113/287 (39%), Gaps = 26/287 (9%) Query: 14 AREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E +F + IY + H H +F+ L + I + ++L Sbjct: 15 LQETVKHGSHDFPLAIYTDKFNLFEDGYIRWHWHKEVQFSYSLYDKVVVFIEDEEIILSP 74 Query: 69 GDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAF-- 125 G+ + I HQ Y+ + ++ L+ +++ + N F Sbjct: 75 GEGIMINSNVLHQIKPYKNIDCMMFSIDFDSTLIGGSEESLIEKKYLSPIIESNNLKFIS 134 Query: 126 -----------LTYVETVISSLNFRETGLE-ELVEMVTFYVINRLRHYREEQVID----- 168 L+++E V + + G E E+ ++ +N ++ +E+ I Sbjct: 135 LKPDVPWQKRILSHLEQVFILSHEKSYGYELEMKNYLSIVWLNLIKEIKEDIKISMPSAS 194 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + + +K ++ + K L+++ + S+ R+ +R TP + + E R++ Sbjct: 195 NDDERVKMAMQYI-QKHYADNIDLDSIARAANISKSECCRSFKRILKVTPFEYLMEYRVS 253 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 A + L S+++I+ + G++ S F K FKK + +P YR K Sbjct: 254 KAAELLLKNKDSISNISLDVGFNGISYFGKVFKKYRNCSPSEYRTKY 300 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 97/252 (38%), Gaps = 12/252 (4%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 H H+ E L G I + + L+R + H + L + + Sbjct: 30 PAHWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSKLYMFLCIHVD 89 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVET-------VISSLNFRETGLEELVEMV 150 K+ + L Y V ++ Y+ +++ + T Sbjct: 90 KKQLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRTNVENKNTSAMRSDGTA 149 Query: 151 TFYVINRLRHYREEQVI-----DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 + + +R++ + + + ++ + +LE + S+EY Sbjct: 150 LLMLADLIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEHYTEKLSLEEVANQVGFSREY 209 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 R +++ G T ++ +NE+RI+ A + L T+ S++++ E+G+++ ++F + FK++ Sbjct: 210 FCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIFNRLFKEIYG 269 Query: 266 FTPKSYRKKLTE 277 TP+ R E Sbjct: 270 MTPRQARNSYAE 281 >UniRef50_A8RPB8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPB8_9CLOT Length = 335 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 23/251 (9%) Query: 42 HDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS---- 97 HD+YE LV +N R+ L G+ + I G H + G + +N+ Sbjct: 82 HDFYEIILVTENSLDILLNNDRIKLGHGNLLLIRPGDIHTKI-QTGDSVHINLAFPAYTV 140 Query: 98 --------------KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGL 143 K F + P++ + + + + +FL + + S + + T L Sbjct: 141 NSLFGYLYNSQAPRKELFAGSHSPIVRLSTIDTLMIQNRLSFLNQLSS--SDMEEKNTHL 198 Query: 144 EE-LVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 L++++ Y+I L + ++P WL +E + + + + ++ +V + +S Sbjct: 199 RAILIDIMYSYIIPELEKQKRSSDASNLPAWLVPALEGLSNPKNLT-MGMDYLVRQTQRS 257 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 E++ R +++ G TP IN R+N+A L T+ + D+ +E+G+ S + F FKK Sbjct: 258 PEHICRMFRKHLGITPSAYINGKRLNYAANLLIHTDMEIVDVIYESGFQSINYFYHLFKK 317 Query: 263 LTSFTPKSYRK 273 +P Y+K Sbjct: 318 EYGISPVKYKK 328 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 100/274 (36%), Gaps = 23/274 (8%) Query: 21 NGKNFHVFIYNKTESIS-GLHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 N + F FI S + +H H D+ E +V+ G ++ ++ +++GD I + Sbjct: 11 NDEGFPFFIQYGYHSNNLSIHTHTDFSELVIVMNGTATHIVDNEKFNIKKGDVFVINSNT 70 Query: 79 HHQSFYEFGATRILNVGISKR-------------------FFEQHYLPLLPYCFVASQVY 119 H + RI N+ E ++ + + Sbjct: 71 CH-GYENAKDFRICNIMYRSENLLLADYDIKKNAGFHALFVIEPYFTKEHSFKSNLTLKP 129 Query: 120 RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTV 178 +++++S + G + + + ++ L R Y + V + Sbjct: 130 LDFEKIHILLDSLLSEYMTKTDGWKTSTKALFMLLVVTLARLYDFGNSSEKVDVINIAKS 189 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + +++ + +S S + R Y TP+ I +RI A L+ T Sbjct: 190 ISYIENHYTEDISIDLLAKISHYSPRHFARIFSETYSTTPLNYIISLRIRRACSLLKETT 249 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 ++ IA + G+S + F + FKK TPK YR Sbjct: 250 LPISTIAIQCGFSDSNYFSRIFKKNLYLTPKQYR 283 >UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVW1_PAESJ Length = 294 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 101/265 (38%), Gaps = 18/265 (6%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 + + LH H+ + TL G +ING L G +FI H Sbjct: 30 PEGRGFNDLHWHEELQITLATKGNLTIQINGIDYRLHTGQAIFINKSVLHIVTDLTAEGE 89 Query: 91 ILNVGISKRFF--------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN----- 137 ++ ++ E++Y+ ++ S + + + + ++ S+ Sbjct: 90 YVSFNFPEKLLAFYSDSAMEKNYVLPFTNSYLLSFEIKGDTEWQKQILNILWSMKKEFEI 149 Query: 138 -----FRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 ++ + V++ + N E + + Q + + + L Sbjct: 150 KKSWGWQYEISIKTVQLWLILISNISLPSEESSKHNRLKQERLQLMLSFIHQNYSNPITL 209 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + + + S TR+ + TP + + RIN + + L+ T Y++T+IA G++ Sbjct: 210 KEIADAAHLSVSECTRSFKTSIRMTPYSYLVKYRINKSCELLQSTEYTITEIASRVGFNQ 269 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTE 277 + FI+ FKK TPK +RK TE Sbjct: 270 VNHFIQAFKKDLKLTPKEFRKNRTE 294 >UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G6_9CLOT Length = 299 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 96/254 (37%), Gaps = 18/254 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH---QSFYEFGATRILNVGI 96 H H E +V G Q I + ++ + VFI H E + R++ Sbjct: 43 HWHPEMELLVVTEGALEQRIGEETHMIRENEGVFINSHVMHGARMVNREDCSYRVIRFEP 102 Query: 97 -------SKRFFEQHYLPLLPYCFVASQVYRT----NNAFLTYVETVISSLNFRETGLEE 145 +E++ L + ++ R + + + + RE E Sbjct: 103 ALLGGNAKSLIYEKYVKTLQSQKDLLYRIVRPEDIQQRRMIDLIYKITDTYVKREVCYEL 162 Query: 146 LVEMVTFYVINRLR----HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAK 201 V+ + + L H E + + + + LE++ Sbjct: 163 KVQQMMLELWELLYKRTGHVEENAIQMNRELYKIQDALAYIQMYYKNPMTLEDIAGACML 222 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S+ R ++ + ++PM+ + RI + + YS+T+IA+E+G+++ S F + F+ Sbjct: 223 SKSSCCRLFKKVFRQSPMEYVTSYRIQQSFMLIADDRYSITEIAYESGFTNSSYFTEMFR 282 Query: 262 KLTSFTPKSYRKKL 275 K+ TP Y+K++ Sbjct: 283 KVIGMTPTQYKKEI 296 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 99/290 (34%), Gaps = 26/290 (8%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVL 65 I E F + +Y+ + H H+ E+ G + G+ Sbjct: 1 MIPIYHENNTHGTAVFPLQVYSHHDKDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFT 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY------ 119 L G+F FI G H+ G + + + + + + F+ Sbjct: 61 LHPGEFCFINSGELHE-IKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFP 119 Query: 120 --------RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL------RHYREEQ 165 + L +++ +I + + +++ ++ Sbjct: 120 TLPSVFSPEESQMILFHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISS 179 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 D LK +E +H+ +L ++ + S Y ++ GK P+ INE Sbjct: 180 KEKDSQNKLKKVIEYIHEN-YAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEY 238 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 RI A + L + V+ +A G+ + S FI+ F++ + TP YR L Sbjct: 239 RIQKACQILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYRSHL 288 >UniRef50_C7G9P1 AraC-type sugar metabolism regulator n=2 Tax=Lachnospiraceae RepID=C7G9P1_9FIRM Length = 291 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 111/282 (39%), Gaps = 18/282 (6%) Query: 16 EQQLFNGKNFHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 E+Q K+F ++ YN H HDYYEF L G I + L+ GD VFI Sbjct: 11 ERQYMLSKDFEIYYYNDNHFYGVTDHTHDYYEFYFFLEGNVTISIEKEHHHLKPGDMVFI 70 Query: 75 PLGSHHQ--SFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY---- 128 P G HH S E + IS+ + ++ Y ++ T++ Y Sbjct: 71 PPGIHHHVSSVGETLPYQRFVFWISQDYCQKLKELSKDYVYLIEHAQDTHHFIYHYDVVA 130 Query: 129 -------VETVISSLNFRETGLEELVEMV---TFYVINRLRHYREEQVIDDVPQWLKSTV 178 + +I ++ G +E+ INR + E L + Sbjct: 131 FNALSAKIFRLIEEIHADRFGKAAKIELCVNDLMLHINRAVYEAEHPAARKDASGLYDGI 190 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + + +L+++ S+ +++ + +G + Q I + R++ + ++N Sbjct: 191 LQYIESHLDEDLSLDSLSKAFFVSKYHISHIFKDNFGISVHQYITKKRLSM-CRDAILSN 249 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 ++T I G+ + F + FKK +PK Y++ + Q Sbjct: 250 ENITKIYLMYGFKDYTSFFRAFKKEYGISPKEYKELYAQKPQ 291 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 94/270 (34%), Gaps = 15/270 (5%) Query: 20 FNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 F+ + ++ H HD E ++L+G+ ++ G+ FI G Sbjct: 25 FDFAAYDADMHQFISGCIPPHWHDELEVFVLLSGQVEVVTGDISCIVNAGEGCFINGGVL 84 Query: 80 HQSFY-EFGATRILNVGI--------SKRFFEQHYL-PLLP--YCFVASQVYRTNNAFLT 127 H G R + F+ Y+ P + + FV + F Sbjct: 85 HTFRALSLGECRYHSFVFESSIVAGAPGSIFDTKYMKPFVEKGHSFVHMKRDEGMEPFFE 144 Query: 128 YVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM---HDK 184 + + E + +I + D+P + ++ M D+ Sbjct: 145 EFDRCFDACAGEGYAYEFDIRDSLTRMILCIAQNMNAPGDSDMPHLAEVRIKDMLGWIDR 204 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 E + + + R +Y PM+ + RI A + L T+ VTDI Sbjct: 205 NLKDEITVSGIAGSANICVRECQRIFSQYVHYRPMEYVQRRRITLAAELLRTTHRQVTDI 264 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A E G+SS S FIK FK + TP YRKK Sbjct: 265 ALECGFSSVSYFIKQFKNIVGCTPTGYRKK 294 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 16/267 (5%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH- 80 G+ ++ I+ H H YE +++G I K + GD + I H Sbjct: 17 GEFYYHRIHRTKPFERNNHYHGTYEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHK 76 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR--------TNNAFLTYVETV 132 S + + + S F + + L R + + + Sbjct: 77 TSGHGDPEHERIVINFSDSFLGKGHPLLASGLLGMFNQDRPLLRLTVPEQAIIMQILNKM 136 Query: 133 ISSLNFRETGLEELVEMVTFYVINRLRHYREEQVI------DDVPQWLKSTVEKMHDKEQ 186 + R E +++++ ++ + + + + Q + V+ +H Sbjct: 137 ADEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDVVKFIH-VHY 195 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + L+ + S YL+R + G T + +N RI A++ L T+ + DIA Sbjct: 196 ADKITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDIAE 255 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRK 273 G+ S + F +TFKK+ + T YRK Sbjct: 256 SIGFESLTHFDRTFKKIMNMTASQYRK 282 >UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Clostridium difficile RepID=Q184W8_CLOD6 Length = 295 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 107/283 (37%), Gaps = 25/283 (8%) Query: 22 GKNFHVFIY----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 K H F + N+ E ++ H H E L+ G IN K + L++G+ V I G Sbjct: 8 PKLIHEFPFRSLSNEGEVLTTPHWHKEIEILLITEGVVNLFINDKPMQLKKGEIVIIKGG 67 Query: 78 SHHQSFYEFGATRILNVGISKRFFEQ---------HYLPLLPYCFVASQVY--RTNNAFL 126 H G+ R L FF + L S+ + + + Sbjct: 68 DIHYILPSPGSER-LVFQFDISFFNDLILLNEEKESLINLFSSIKKCSRDWSAKIRKSVF 126 Query: 127 TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQW---------LKST 177 + + + ++ G ++ + +I L ++ ++ ++ + Sbjct: 127 DILIDIYNEDLYKIEGYSYAIKGKMYNLIPILYRQIPREIEENTVEYEINSKEILERLNN 186 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + K +K LE++ S Y T+ ++ GKT + +NE R+ AK L Sbjct: 187 IFKYVEKNYKQPIKLEDVSYEVGFSVYYFTKFFKKNTGKTFITFLNEYRLEKAKWILLNN 246 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 N S+ D+ E G+ S F + FK+ +P ++K+ + Sbjct: 247 NISIVDLVEEVGFGSTKTFYRVFKEKIGVSPLEFKKRYNSLEK 289 >UniRef50_UPI0001C3636B helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3636B Length = 274 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 105/256 (41%), Gaps = 9/256 (3%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 I+ K E S H H EFT ++TG+ ++ L G+ + G H Sbjct: 12 IFYKDEFSSKKHWHKEIEFTYLVTGKLIICVDEVMHELHEGELFVVSGGVVHYYIETEEK 71 Query: 89 TRILNVGISKRFFEQHYLPLLPYC--FVASQVY-RTNNAFLTYVETVISSLNFRETGLEE 145 ++ +S + F+ + + F +S +Y ++ T +I+ ++ + ++E Sbjct: 72 YKVGIAKMSLQAFDGFSKKVKDFFRGFYSSVLYVAKDDQIKTIFRDIINLISKQNIVIQE 131 Query: 146 ------LVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 ++++ + + E+ + L + + + L +M + Sbjct: 132 SVLISRIIDLTVYLSSHEELIKNREEYRKNSDAELLERMRTYFAEHYNEKIGLADMASHL 191 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S+ Y ++ ++ ++ +N RI A+ L T SVT+IA+ G++S F + Sbjct: 192 GFSESYCSKYIKKKTNMNFLEYLNSCRIMRAETLLRTTENSVTEIAYAIGFTSIQSFNRV 251 Query: 260 FKKLTSFTPKSYRKKL 275 FK +P YRK+L Sbjct: 252 FKSFCDESPTEYRKRL 267 >UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJM2_CLOCL Length = 286 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 97/254 (38%), Gaps = 15/254 (5%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT----- 89 ++ H HDYYE L G + IN + +++GD V I G H++ Y Sbjct: 25 TMPREHSHDYYEIYYQLYGERYYIINNRSYYIKKGDIVLINKGVFHKTTYAGAINYERVL 84 Query: 90 -----RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLE 144 IL I + F + + + + + F +I N R + E Sbjct: 85 VGFKEHILKDIIPQEEFTELLSTFEKDISIINLSIQNQHTFEVLFTKLIHENNNRLSSYE 144 Query: 145 ELVEMVTFYVINRLRHYREEQVID--DVPQWLK---STVEKMHDKEQFSESALENMVALS 199 +++ ++ + + E+ + + P L S + + L+ + Sbjct: 145 TYSKLLLVELLININRHLEKGHVSYLEFPSALHKKVSEIAQYITDNCDKVLNLDILAHKF 204 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S YL+R + G +Q IN RI ++ L T+ + +I G++S F + Sbjct: 205 LISPYYLSRVFKDVTGFNLIQFINSERIKKSQYLLIETSLPIYEICEVVGFNSTIHFTRV 264 Query: 260 FKKLTSFTPKSYRK 273 F TS +P YRK Sbjct: 265 FNSFTSMSPSKYRK 278 >UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197BA84 Length = 292 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 113/284 (39%), Gaps = 18/284 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 AT + + G +F V Y + LH H YE L+ G+ + L G Sbjct: 9 MEATFEKVEKRKGTSFSVVSYTNPYFAAPLHIHPEYELILIEEGKGLSFVGDSIQELSPG 68 Query: 70 DFVFIPLGSHH-----QSFYEFGA--TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN 122 DF+ I H +Y+ +R + R F + + S + ++ Sbjct: 69 DFMLIGKNLPHLWLSADEYYQNSGLVSRSVYTQFDDRIFPASLHDIPELENIYSLLKKSQ 128 Query: 123 NAF------LTYVETVISSLNFRE-----TGLEELVEMVTFYVINRLRHYREEQVIDDVP 171 + ++ + SL +E GL L+ ++ + D Sbjct: 129 KGVFFTGGSIEALKELFRSLVTKEGFEKIEGLYTLLYRLSSECNHATLTTENYINSDSTE 188 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + + V +K + ALE++ + L R +++ GK + + E+RI++A Sbjct: 189 DPIINKVHLFINKNYQNNIALEDIACNVGMNPSALCRYYKKHTGKRMFEYLTELRISYAT 248 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 K L N +++ +A++ GY+S S F FK++T +TP Y +KL Sbjct: 249 KLLINKNINISQVAYDCGYNSLSHFNHQFKQVTGYTPSEYAQKL 292 >UniRef50_C0EH74 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EH74_9CLOT Length = 302 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 12/259 (4%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 N V+ S H H E + G IN + GD V G H S Sbjct: 13 NLRVWTCCYNGLTSLPHYHREIELLYIRQGCAHVGINSQSYTCYGGDLVISQTGDMHYSN 72 Query: 84 YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVIS----SLNFR 139 E + + E Y V + V+ + S L + Sbjct: 73 SENEDNILDFIVFEPSVLETVYSNDRSLQSVLTAKELKKTGMDEIVQRMYSTVHSELKNQ 132 Query: 140 ETGLEELVEMVTFYV-------INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 E + L+++ + R + Q + L+ ++ + D ++ +L Sbjct: 133 EMDFDTLIKLTLSEFWVKYTRYFGQTRTAEDRQPMVTALAKLQKLMDYIEDN-FANDISL 191 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + + + ++ ++ G + +N +++ A + + + YS+TDIA G+++ Sbjct: 192 SDAAEIMGYEVCHCSKVFKKLTGVNFTEYLNNVKVGKAIEMIRKSEYSITDIAMRCGFNN 251 Query: 253 PSLFIKTFKKLTSFTPKSY 271 F + FK +T TP + Sbjct: 252 IRTFNRVFKSITKMTPTHF 270 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Ta... 269 7e-71 UniRef50_C4X747 Negative transcriptional regulator of cel operon... 249 1e-64 UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae... 248 2e-64 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 232 1e-59 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 229 7e-59 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 228 1e-58 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 228 2e-58 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 228 2e-58 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 224 2e-57 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 223 6e-57 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 223 6e-57 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 222 1e-56 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 221 3e-56 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 220 4e-56 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 219 9e-56 UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=B... 219 1e-55 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 218 1e-55 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 218 2e-55 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 217 4e-55 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 217 4e-55 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 216 5e-55 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 214 2e-54 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 214 2e-54 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 214 3e-54 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 214 3e-54 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 214 4e-54 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 213 4e-54 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 213 5e-54 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 213 5e-54 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 213 5e-54 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 213 6e-54 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 213 6e-54 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 213 8e-54 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 211 1e-53 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 211 2e-53 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 210 4e-53 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 210 4e-53 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 210 4e-53 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 210 6e-53 UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=B... 209 6e-53 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 209 8e-53 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 209 9e-53 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 209 1e-52 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 208 2e-52 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 208 2e-52 UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 T... 208 2e-52 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 207 3e-52 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 207 3e-52 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 207 3e-52 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 207 3e-52 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 207 3e-52 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 207 4e-52 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 207 5e-52 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 206 6e-52 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 206 6e-52 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 206 6e-52 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 206 7e-52 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 206 8e-52 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 206 1e-51 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 206 1e-51 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 205 1e-51 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 205 1e-51 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 205 2e-51 UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=A... 205 2e-51 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 204 2e-51 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 204 3e-51 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 204 3e-51 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 204 3e-51 UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protei... 204 3e-51 UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=S... 203 4e-51 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 203 5e-51 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 203 5e-51 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 203 6e-51 UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC... 202 7e-51 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 202 7e-51 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 202 7e-51 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 202 1e-50 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 202 1e-50 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 202 1e-50 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 201 2e-50 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 201 2e-50 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 201 2e-50 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 201 3e-50 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 201 3e-50 UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/Xyl... 201 3e-50 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 200 4e-50 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 200 4e-50 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 200 4e-50 UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 ... 200 4e-50 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 200 5e-50 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 200 5e-50 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 200 6e-50 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 200 6e-50 UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral... 199 6e-50 UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostri... 199 6e-50 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 199 6e-50 UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostri... 199 6e-50 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 199 6e-50 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 199 7e-50 UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 T... 199 7e-50 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 199 8e-50 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 199 8e-50 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 199 8e-50 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 199 8e-50 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 199 8e-50 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 199 8e-50 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 199 9e-50 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 199 1e-49 UniRef50_C0EDY4 Putative uncharacterized protein n=1 Tax=Clostri... 199 1e-49 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 199 1e-49 UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostri... 198 1e-49 UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=S... 198 2e-49 UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=P... 198 2e-49 UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaeros... 198 2e-49 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 198 2e-49 UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotro... 198 2e-49 UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostri... 198 2e-49 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 198 2e-49 UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales ... 197 2e-49 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 197 3e-49 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 197 3e-49 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 197 3e-49 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 197 3e-49 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 197 3e-49 UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=... 197 3e-49 UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus s... 197 4e-49 UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=... 197 4e-49 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 196 6e-49 UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostri... 196 6e-49 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 196 6e-49 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 196 6e-49 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 196 6e-49 UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=... 196 7e-49 UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 T... 196 7e-49 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 196 7e-49 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 196 7e-49 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 196 8e-49 UniRef50_Q0ST06 Transcriptional regulator, AraC family n=13 Tax=... 195 1e-48 UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostri... 195 1e-48 UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostri... 195 1e-48 UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=L... 195 1e-48 UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostri... 195 1e-48 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 195 1e-48 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 194 2e-48 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 194 2e-48 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 194 2e-48 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 194 2e-48 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 194 2e-48 UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostri... 194 2e-48 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 194 3e-48 UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=C... 194 3e-48 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 194 3e-48 UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Cl... 194 4e-48 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 193 4e-48 UniRef50_B0A839 Putative uncharacterized protein n=1 Tax=Clostri... 193 5e-48 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 193 5e-48 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 193 5e-48 UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=P... 193 5e-48 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 193 6e-48 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 193 6e-48 UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC... 193 7e-48 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 193 7e-48 UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=C... 192 7e-48 UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=B... 192 8e-48 UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminoc... 192 8e-48 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 192 8e-48 UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminoc... 192 9e-48 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 192 9e-48 UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacterial... 192 9e-48 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 192 1e-47 UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bactero... 192 1e-47 UniRef50_C0EIV3 Putative uncharacterized protein n=1 Tax=Clostri... 192 1e-47 UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostri... 192 1e-47 UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Ta... 192 1e-47 UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacte... 192 1e-47 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 191 2e-47 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 191 2e-47 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 191 2e-47 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 191 2e-47 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 191 3e-47 UniRef50_C0D5Z0 Putative uncharacterized protein n=1 Tax=Clostri... 191 3e-47 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 191 3e-47 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 191 3e-47 UniRef50_Q9S309 Putative AraC-type Regulator n=1 Tax=Ruminococcu... 191 3e-47 UniRef50_C6CWW3 Transcriptional regulator, AraC family n=1 Tax=P... 191 3e-47 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 191 3e-47 UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enteroc... 190 4e-47 UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostri... 190 4e-47 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 190 4e-47 UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Diali... 190 4e-47 UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=S... 190 5e-47 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 190 5e-47 UniRef50_C0EH74 Putative uncharacterized protein n=1 Tax=Clostri... 190 5e-47 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 190 5e-47 UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=B... 190 6e-47 UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides Re... 189 6e-47 UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostri... 189 6e-47 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 189 6e-47 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 189 7e-47 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 189 7e-47 UniRef50_C0D9W5 Putative uncharacterized protein n=1 Tax=Clostri... 189 8e-47 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 189 8e-47 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 189 8e-47 UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostri... 189 9e-47 UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family prot... 189 1e-46 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 189 1e-46 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 189 1e-46 UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=C... 189 1e-46 UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=C... 189 1e-46 UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Cl... 189 1e-46 UniRef50_A7AFT7 Putative uncharacterized protein n=2 Tax=Parabac... 189 1e-46 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 188 1e-46 UniRef50_A8SUZ2 Putative uncharacterized protein n=2 Tax=Clostri... 188 1e-46 UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T... 188 2e-46 UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostri... 188 2e-46 UniRef50_B7C800 Putative uncharacterized protein n=1 Tax=Eubacte... 188 2e-46 UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=G... 188 2e-46 UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostri... 187 3e-46 UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=C... 187 3e-46 UniRef50_C0EGG3 Putative uncharacterized protein n=1 Tax=Clostri... 187 4e-46 UniRef50_UPI0001BC838F helix-turn-helix- domain containing prote... 187 4e-46 UniRef50_C0EAY1 Putative uncharacterized protein n=1 Tax=Clostri... 187 4e-46 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 187 4e-46 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 187 4e-46 UniRef50_A9E4Z4 tRNA delta(2)-isopentenylpyrophosphate transfera... 187 4e-46 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 187 5e-46 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 187 5e-46 UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacteri... 186 5e-46 UniRef50_C6VY23 Transcriptional regulator, AraC family n=2 Tax=S... 186 6e-46 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 186 6e-46 UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 T... 186 6e-46 UniRef50_C6J603 Transcriptional regulator n=5 Tax=Bacilli RepID=... 186 6e-46 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 186 7e-46 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 186 7e-46 UniRef50_UPI0001C3660E AraC family transcriptional regulator n=1... 186 9e-46 UniRef50_C7GHR9 Transcriptional regulator, AraC family n=2 Tax=L... 186 9e-46 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 186 9e-46 UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=C... 186 1e-45 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 186 1e-45 UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D2... 186 1e-45 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 186 1e-45 UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=S... 186 1e-45 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 186 1e-45 UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostri... 186 1e-45 UniRef50_C0EI59 Putative uncharacterized protein n=1 Tax=Clostri... 185 1e-45 UniRef50_C6I5T7 AraC family transcriptional regulator n=18 Tax=r... 185 1e-45 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 185 1e-45 Sequences not found previously or not previously below threshold: UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostri... 197 3e-49 UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula m... 187 3e-46 UniRef50_C6JDN8 Putative uncharacterized protein (Fragment) n=1 ... 186 7e-46 >UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Tax=Enterobacteriaceae RepID=CHBR_ECOLI Length = 280 Score = 269 bits (689), Expect = 7e-71, Method: Composition-based stats. Identities = 279/280 (99%), Positives = 279/280 (99%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN Sbjct: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR Sbjct: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 TNNAFLTYVETVISSLNFRETGLEE VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK Sbjct: 121 TNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS Sbjct: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ Sbjct: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 >UniRef50_C4X747 Negative transcriptional regulator of cel operon n=8 Tax=Enterobacteriaceae RepID=C4X747_KLEPN Length = 279 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 227/279 (81%), Positives = 250/279 (89%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 M QP + EI+TAREQQLFNGKNFHV IYNKTES+SGLHQHDYYEFT+VLTGRY+QEIN Sbjct: 1 MRQPRMMTTEISTAREQQLFNGKNFHVVIYNKTESVSGLHQHDYYEFTVVLTGRYYQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIP+GSHHQSFYEFGATRILNVGIS+RFFE+HYLPLLP+ VASQVY Sbjct: 61 GKRVLLERGDFVFIPMGSHHQSFYEFGATRILNVGISRRFFEKHYLPLLPFGLVASQVYA 120 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 +AFL YVE+VI+SLNFRET +E +E+V+FYVINRLRHYREE V D PQWLK+TVE Sbjct: 121 VQSAFLGYVESVIASLNFRETEFDEFIELVSFYVINRLRHYREEPVADVTPQWLKNTVEA 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDK +F E ALENMV LS K+QEYLTRATQRYYGKTPMQIIN+IRINFAKKQLE+TNYS Sbjct: 181 MHDKLKFGEGALENMVRLSGKTQEYLTRATQRYYGKTPMQIINDIRINFAKKQLEITNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 VTDIA+E+GYSSPSLFIKTFKKLTSFTP SYRK LT N Sbjct: 241 VTDIAYESGYSSPSLFIKTFKKLTSFTPSSYRKHLTSIN 279 >UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae RepID=D2TGS1_CITRO Length = 282 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 241/279 (86%), Positives = 261/279 (93%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEING 61 +Q APEI A EQQLFNGKNFHVFIYNKTES GLHQHDYYEFTLVLTGRY+QEING Sbjct: 4 LQATATAPEITVAHEQQLFNGKNFHVFIYNKTESACGLHQHDYYEFTLVLTGRYYQEING 63 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 KRVLLERGDFVFIPLGSHHQSFYEFG+TRILNVGISK FFEQHY PL+PYCFVASQVYR Sbjct: 64 KRVLLERGDFVFIPLGSHHQSFYEFGSTRILNVGISKHFFEQHYSPLMPYCFVASQVYRI 123 Query: 122 NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 N+AFLTYVETV++SLNFR+TGLEE VE+VTFY+INRLRHYREEQV DD+PQWLK+TVE M Sbjct: 124 NSAFLTYVETVVASLNFRDTGLEEFVEVVTFYIINRLRHYREEQVPDDIPQWLKATVETM 183 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H+KEQF E+ALENM+ALSAKSQEYLTRATQRYY KTPMQ+INEIRINFAKKQLEMTNYSV Sbjct: 184 HNKEQFGENALENMIALSAKSQEYLTRATQRYYRKTPMQLINEIRINFAKKQLEMTNYSV 243 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 TDIAFEAGYSSPSLFIKTFKK+TSFTP SYRKKLT+++Q Sbjct: 244 TDIAFEAGYSSPSLFIKTFKKMTSFTPNSYRKKLTQYSQ 282 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 107/286 (37%), Gaps = 23/286 (8%) Query: 14 AREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + + V +Y + LH HD E LV G ++ + L+ G Sbjct: 6 LKEARKHGNPIYPVSLYEITCPSDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAG 65 Query: 70 DFVFIPLGSHHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN----- 123 + +F+ G H + G V F + L +++ + + Sbjct: 66 EAIFVNSGELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHL 125 Query: 124 --------AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE-----EQVIDDV 170 L ++ + + E ++ + F ++ +L + + + Sbjct: 126 RREPGPGMELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGY 185 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 TV + ++ L+ + L+ S+ Y R +R K+P++ +N R+ A Sbjct: 186 RIERLKTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQA 245 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +L T+ + ++A + G++S S F F++ TP+ YR +L Sbjct: 246 ASRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 100/285 (35%), Gaps = 22/285 (7%) Query: 13 TAREQQLFNGKNFHV----FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 + +E + + F + + + H H E V+ G +I+ + + + Sbjct: 8 SLKESTVHGNERFPFGAYWYQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQIDSEYIPVRA 67 Query: 69 GDFVFIPLGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYR------- 120 G+ +FI G H + + L+ + R Sbjct: 68 GEAIFIDGGDLHTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERRAAFPRR 127 Query: 121 ----TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVIN------RLRHYREEQVIDDV 170 T+ L +++ ++ + G E ++ F ++ RL + + D Sbjct: 128 MTSGTDERLLEHIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRSEAADMT 187 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 V L + L S+ R + G+TP+ +N R+ A Sbjct: 188 RTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQA 247 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + L + ++DIA + G+ S F++ F+K+ + TP YRKKL Sbjct: 248 AELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 105/290 (36%), Gaps = 26/290 (8%) Query: 16 EQQLFNGKNFHVFIYNK------TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E + FH+ Y+ + LH H EF +V G ++ +R +L G Sbjct: 52 EHRQHGDTTFHIRAYHVVLTPGPYQQTVNLHWHSEAEFIVVTRGSVCLQVGSERHVLADG 111 Query: 70 DFVFIPLGSHHQSFYEF-GATRILNVGISKRFFE---------QHYLPLLPYCFVASQVY 119 D + G H G + + E + PL + Sbjct: 112 DVALLSGGELHSMAAPGKGPSECKAIVFGLDLLEGPSSDRVQQSYLSPLASGKLLLPGAI 171 Query: 120 RTNNAFLTYVE----TVISSLNFRETGLEELVEMVTFYVINRLRH------YREEQVIDD 169 ++ Y+ ++ +L + G E V+ + V+ +L + + +DD Sbjct: 172 AHDHPVRQYLAARLCEIVEALEEQPVGYELAVKGCLYDVLAQLFRAELLVEHSPRREMDD 231 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V D + L ++ ++ S+ + R + + PMQ +NE R+ Sbjct: 232 RRADTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVAR 291 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 A L+ N S+T I + G+ S FIK F+ TP +YRK L + Sbjct: 292 AADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKALLKKP 341 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 92/283 (32%), Gaps = 20/283 (7%) Query: 12 ATAREQQLFNGKNFHVFIYNKTE----SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 E + G++F IY + +H H+ E V GR ++ + Sbjct: 52 YGYHEIKEHAGRDFPFNIYPCSIPADFRQVPVHWHEDMEIIAVKKGRGVVTVDMEPYEAR 111 Query: 68 RGDFVFIPLGSHHQS-FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQV-------- 118 G+ V + G H A N+ L Y F+ Sbjct: 112 AGEAVVVFPGQLHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPL 171 Query: 119 -----YRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY--REEQVIDDVP 171 AF+ + + + + V+ F+ + + E Sbjct: 172 HITGGLPDYGAFMECIGILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKS 231 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + + + ++ + +E+ L S + + ++Y G +Q +NE R+ A Sbjct: 232 RERMKRLLEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAA 291 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L T VT +A G+ + S F + F++ TP YRK Sbjct: 292 GMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 97/281 (34%), Gaps = 18/281 (6%) Query: 12 ATAREQQLFNGKNFHVFIYNKTE----SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 A+ +E + F +Y T LH H+ E V G ++ Sbjct: 5 ASLQETKQHGAVRFPFNLYPCTIPGDFQQVALHWHESMELVFVKQGMGLVQVGVVTYPAY 64 Query: 68 RGDFVFIPLGSHHQS-FYEFGATRILNVGISKRFF--------EQHYLPLLPYCFVASQV 118 RGD G+ H E N+ E++ LPL Sbjct: 65 RGDIFIFAPGTLHALRQAEGQRMEYENIIFEPELLGGAEDLCAEKYLLPLQSGRLSLPVR 124 Query: 119 YRTNN----AFLTYVETVISSLNFRETGLEELVE-MVTFYVINRLRHYREEQVIDDVPQW 173 N+ + + + + G E LV+ + ++ + R+ + Sbjct: 125 LTPNDLCYLQAAACLRELEDANRAKRPGYELLVKGALLRFLALLIAQGRQCLSTETADTQ 184 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 TV + + + + + S + R ++ G++ + +NE R+N A + Sbjct: 185 RLKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAAEA 244 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L T+ +V IA G+ + S F + FK TP+ YRKK Sbjct: 245 LRTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 101/241 (41%), Gaps = 4/241 (1%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 +++ H H+++E + GR I + +L+ +F+ P H SF E R Sbjct: 24 NDNMVRSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFVMHHSFEENDVPFRR 83 Query: 92 LNVGISKRFFEQ-HYLPLLPYCFVASQVYRTNN-AFLTYVETVISSLNFRETGLEELVEM 149 L + + L L ++ R + ++ ++ + EL+ + Sbjct: 84 LLLYFNPEVIRSPQILRTLSERARVYKLPRAQSAPIYNLMKDILQEQERDDLYSRELITL 143 Query: 150 VTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 + + +L +E + + + + + LE + SQ +L R Sbjct: 144 MVNALALQLVRNSDEAARPEQRNRVTD-IINYLHEHFTEDITLEQLANHFYVSQYHLCRE 202 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 +RY T +Q I+ +R+ A++ L+ ++YS+T+I+ G+S+ + F + +K +T +P Sbjct: 203 FKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSPS 262 Query: 270 S 270 Sbjct: 263 Q 263 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 107/285 (37%), Gaps = 16/285 (5%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNK----TESISGLHQHDYYEFTLVLTGRYFQEING 61 + + +F +F++ + H H+ +E + G ++G Sbjct: 1 MRVRKKELIESDVSHGTPDFPLFVHEDIFVYRNGVVNPHWHNEFEILYMERGIGKFYVDG 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR- 120 L G+++F+ GS H + + R + + + + Sbjct: 61 YEYKLNEGEYLFVNSGSIHSGLEMIKRSIGYAIVFDLRLLYSEEPDYCKHEYFLPLINKR 120 Query: 121 -------TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDD---- 169 + + +I + G E ++ + F + R+ Y E+ D Sbjct: 121 YHIPSNLNDEHIRNDICRIIEVFKEKSYGYELYIKSLLFDIFWRVFKYYAERRNQDGRLG 180 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V ++ +L+ + S+ YL R + +P++ IN++R++ Sbjct: 181 YKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVDK 240 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A + L T+ SV++IAFE G+ + S FIK FKK TP +RK+ Sbjct: 241 AMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQ 285 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 99/289 (34%), Gaps = 25/289 (8%) Query: 13 TAREQQLFNGKNFHV----FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 + +E + + + Y E + H HD EF L G +++ + Sbjct: 8 SLKESKSHGNERQPFGTYWYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGA 67 Query: 69 GDFVFIPLGSHHQSFYE-FGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT------ 121 G+ VFI G H + ++ + + + V R Sbjct: 68 GEAVFIDGGDIHAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRH 127 Query: 122 -------NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL-------RHYREEQVI 167 + + L ++ ++ S + G E V+ F ++ + Sbjct: 128 IRRETAADLSLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRS 187 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + TV + L + AL S+ R + +TPM IN RI Sbjct: 188 ESSKIDRLKTVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRI 247 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A + L ++DIA E G+ + S FI+ F+K + +P +RK+L Sbjct: 248 RQAAELLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQ 296 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 108/278 (38%), Gaps = 16/278 (5%) Query: 14 AREQQLFNGKNFHVFIYNK----TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E+ F + +Y K + H HD +E + G ++GK L Sbjct: 7 LKEKVQHGSAVFPINVYEKIFVHENNTLLPHWHDEFEIVYLEKGTASFRVDGKEYFLGPK 66 Query: 70 DFVFIPLGSHHQSFYEFGATRI-LNVGIS------KRFFEQHYLPLLPYCFVASQVYRTN 122 F+F+ GS H E + +S + YL + + Q + Sbjct: 67 QFLFVNCGSIHGGKAEDNPEPYAIVFSLSMLFSEGPDICKSKYLQSVSERKLLVQNSFED 126 Query: 123 NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ-----WLKST 177 + +I+ + G E LV+ F + L + R + + Sbjct: 127 EHTRELISNIITVWKEKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKS 186 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + S+ ++ + L+ S+ Y R + TP+ IN+ R+ A + ++ T Sbjct: 187 ALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNT 246 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 N S+++IAFE G+++ S FIK FK+ TP Y+K + Sbjct: 247 NLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKKNV 284 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 112/279 (40%), Gaps = 16/279 (5%) Query: 13 TAREQQLFNGKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E + +F + Y+ + S H H YE +++G + +NG + L+ Sbjct: 5 DYKENRQHGTFDFPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNELKLKT 64 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGIS-----KRFFEQHYLPLLPYCFVASQVYRTNN 123 GD FI G H + + + ++ V + + T+N Sbjct: 65 GDLAFIHAGILHGGTPIDCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDN 124 Query: 124 -AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM- 181 T + S+ ++ G E + + ++++ + +R + + + + Sbjct: 125 LELQTVCNYLFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFK 184 Query: 182 -----HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 +++ LE++ + + +Y R + ++P+ +N RI + +QL Sbjct: 185 NVLSLIEQQYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVS 244 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 TN S+T+IA G++ S FIKTFKK TPK Y K Sbjct: 245 TNESITEIALNCGFNDISYFIKTFKKYKGVTPKQYLKDY 283 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 107/283 (37%), Gaps = 19/283 (6%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISG--LHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A REQ F + Y + S H H+ +EF L G ++N R+ L+ G Sbjct: 27 AAGREQTQHGSPLFPIACYAEDLSCFSVAWHWHEEFEFILAALGPIHVDVNKTRLTLQTG 86 Query: 70 DFVFIPLGSHHQSFYEFGATRI--------LNVGISKRFFEQHYLPLL----PYCFVASQ 117 VFI G+ H G + L G+ F+++ PLL P F+ + Sbjct: 87 QGVFINSGALHAVEPAEGRALLHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFFLLDE 146 Query: 118 VYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR-----EEQVIDDVPQ 172 L + + E V + L + + + Sbjct: 147 AVPWQRQVLLCLREAWKGVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQEQIAS 206 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 + + ++ E +E + A S+ R+ +++ G TP+Q + + R+ A + Sbjct: 207 ERMKQMLRYVEEHYAEELTVEKLAGCVALSESACLRSFRQFLGITPIQYVKQFRVEKAAE 266 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 L T ++ E G+S S FIKTF+++ TP+ YR + Sbjct: 267 LLRSTRLKTGEVGLECGFSDASYFIKTFREIKHCTPREYRIRF 309 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 5/247 (2%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATR 90 + S H H + E V G + +I GK++ +++ D + I H F Sbjct: 29 DKDWHSMEHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQPWE 88 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMV 150 + +GI F Q+ PY + + R + Y+ T++ + ++ G + + + + Sbjct: 89 YIALGIEGVQF-QYSEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQNL 147 Query: 151 TFYVINRLRHYREEQVID---DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 ++ + ++ + VE+ ++ + L+ + AL ++ YL Sbjct: 148 LELILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINKYYLV 207 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 A + Y G +P+ + + R+ A+ LE TNYSVT I +G+SS S F +TF++LT T Sbjct: 208 HAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLTGTT 267 Query: 268 PKSYRKK 274 P +YRKK Sbjct: 268 PNAYRKK 274 >UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDM6_9FIRM Length = 298 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 97/282 (34%), Gaps = 20/282 (7%) Query: 12 ATAREQQLFNGKNFHVFIYNKTES-ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 A +E + F YN + H H+ YE + V G L GD Sbjct: 12 ANGQELKQHGTGLFPCGCYNASPEVQVPWHWHEEYECSYVFHGAVTYHTPQGEFRLGEGD 71 Query: 71 FVFIPLGSHHQSFYEFGAT----------RILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 +F+ G+ H + R++ ++++ PL + + R Sbjct: 72 GIFLNSGTLHTVEVAPAGSLKKSDLVFHGRLIYGSRDSVLYQKYVQPLSAPDAFQTLILR 131 Query: 121 ----TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE-----EQVIDDVP 171 + L+ ++ + G E V + + L YR Sbjct: 132 RTVSWHAEILSRIKKAVRLCQNEPEGYEFTVRSLLSEIFFDLYCYRNAPAAETSAATASE 191 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + + + + + A + + R Q+ +P+Q + RI + Sbjct: 192 NARIKQMLRYLQENYTRRVTVAELAAHANICERECLRCFQKVLHLSPIQYLIRYRIARSC 251 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L ++ SV +I+ G+ SPS F KTF+++T TP YR+ Sbjct: 252 ILLRESDLSVLEISNLCGFESPSYFTKTFRQITGGTPTQYRR 293 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 19/283 (6%) Query: 9 PEIATAREQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 E+ + +E + F IY T LH H E V G + Sbjct: 86 KELESFQETKKHGSTMFPFNIYPCTIPGDFPSVALHWHKSMEIIFVKKGTGRIQTGRNMQ 145 Query: 65 LLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFF---------EQHYLPLLPYCFV 114 GD +P G+ H + G N+ F +++ +PL + Sbjct: 146 EARSGDIFVMPPGTLHAIYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQLL 205 Query: 115 ASQVYRT----NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV 170 V+ + + RE G E V+ ++ L E D Sbjct: 206 QPAVFSPVDAGYKQISACLRRAEELCSARERGYELGVKAALLELLLYLLRMCPEAPERDT 265 Query: 171 PQ-WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 P V + +++ + +M A+ S + R +R G +P+ +NE R+ Sbjct: 266 PDMERLKRVLQRIEQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAA 325 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A + L T+ + IA AG+ + S F + FKK TP++YR Sbjct: 326 AAENLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 98/293 (33%), Gaps = 21/293 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIY----NKTESISGLHQHDYYEFTLVLTGRYF 56 M ++ + E ++ +F Y LH HD E ++ G Sbjct: 1 MQNIEMDKLQYKIYHENKIHTPDDFPYNTYLCSIPLDFQSVNLHWHDEVEIIVIKKGSGI 60 Query: 57 QEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVA 115 ++ + GD +F+ G H + N+ + L F+ Sbjct: 61 VSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFIQ 120 Query: 116 SQVY-------------RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR 162 +T + + + R + ++ F ++ L Sbjct: 121 PLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYTLVSNC 180 Query: 163 EEQVIDDVPQW---LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 + I + Q T+ A+E++ S+ Y + + G + + Sbjct: 181 GQNKIKPINQKSLKKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFI 240 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 Q +N+ R+ A + L T ++ DIAF G+++ S F + FKK +P+ YR Sbjct: 241 QYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 100/301 (33%), Gaps = 24/301 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRY 55 M RE F Y+ + H H+ E + +G Sbjct: 1 MSLQECTVSTDQDRREVCPHGTIEFPCAGYDSVYSSHAINRIPWHWHEELEVIFLPSGTL 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR---------FFEQHYL 106 + GKR + GD + I H++ R+ ++ F++++ Sbjct: 61 DVRVPGKRFRMNAGDCLVINSNILHEAET-SNECRLHSLVFHTDLISGSDSSVFYKKYMY 119 Query: 107 PLLPYCFVASQVYRTNN----AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR 162 PL+ C + ++ + + +L G E V + L + Sbjct: 120 PLISSCTLDCVLFSAEDTSGVSIRQCFMMAFDALANNREGYEFTVRECLSRLCFLLCTFY 179 Query: 163 EEQVID-----DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKT 217 + ++ D D + + M L ++ + + R R G + Sbjct: 180 KPEISDTSAKPDQDSFRIKEMIHMIQSRYAEPLKLCDIAQAANIGERECLRCFHRTLGIS 239 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 PMQ + R++ L TN S+ +I+ G+ SPS F TFK+ +P+ YRK Sbjct: 240 PMQYLIRYRLSKGALLLINTNKSIAEISTRCGFDSPSNFSLTFKRKYQCSPREYRKNNKT 299 Query: 278 F 278 Sbjct: 300 L 300 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 90/278 (32%), Gaps = 20/278 (7%) Query: 14 AREQQLFNGKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + +F Y+ TES H H+ E +++G + IN G Sbjct: 6 YKEIKHHGTADFPAGYYHVTESHPQYAMPYHWHEELELIHIISGTFHVTINETTRNAVPG 65 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFFE-QHYLPLLPYCFVASQVYRT------- 121 D + + G H + Q Y + Sbjct: 66 DILLVNSGGLHGG--TPYDCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAGD 123 Query: 122 NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV------PQWLK 175 + A + +E + + + + G + + + + L R D +L Sbjct: 124 DTAIHSLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLL 183 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 V + + L + + S +Y G+TP+ +N R+ A L Sbjct: 184 KNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLA 243 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +S+TDIA G++ S F + FKK +P Y K Sbjct: 244 GIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQYLK 281 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 100/284 (35%), Gaps = 26/284 (9%) Query: 16 EQQLFNGKNFHVFIYNKTESISG------LHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E + FH+ Y+ + LH H EF +V G ++ +R +L G Sbjct: 8 EHRQHGDATFHIQAYHVVLTPGPHQQTVNLHWHSEAEFIVVTRGSVCLQVGSQRHVLADG 67 Query: 70 DFVFIPLGSHHQSFYEF-GATRILNVGISKRFFE---------QHYLPLLPYCFVASQVY 119 + G H G + + E + PL Sbjct: 68 GVALLSGGELHSMASPGKGPSECKAIVFGLDLLEGPSGDRVQQSYLSPLASGKLRLPGAI 127 Query: 120 RTNNAFLTYVE----TVISSLNFRETGLEELVEMVTFYVINRLRHY------REEQVIDD 169 ++ ++ + +L + G E V+ + V+ +L + +DD Sbjct: 128 AHDHPVRPHLAARLCEIAEALEEQPVGYELAVKGCLYDVLAQLFRAKLLVEDSPRREMDD 187 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V D+ + L ++ ++ S+ + R + + PMQ +NE R+ Sbjct: 188 RRADTLKAVLTYIDEHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVAR 247 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 A L+ N S+T I + G+ S FIK F+ TP +YRK Sbjct: 248 AADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRK 291 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 91/298 (30%), Gaps = 26/298 (8%) Query: 4 PVINAPEIATAREQQLFNGKNFHVFIYNKTESISGL-----HQHDYYEFTLVLTGRYFQE 58 + E F ++ T S H H E +L G + Sbjct: 1 MIREIITDKNMLELNPHGNYGFPFYLIYVTLSAYQFGRFNCHWHPELEIACILEGTMTYQ 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILNVGISKRFF---------EQHYLPL 108 +N L +GD +F+ + H +E + + + + PL Sbjct: 61 VNQNLYQLGKGDCLFVNSNALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPL 120 Query: 109 LPYCFVASQVYRT----NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE 164 L S V+R N F ++ + + E ++ + L + Sbjct: 121 LNTDNFTSFVFRDGADGNETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQR 180 Query: 165 QVIDD-------VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKT 217 + L+ M S+ R ++ +T Sbjct: 181 SQLPSGAGLAEAKQISRLKNAIIFIHSSYTDPITLDQMAESCHTSKSEFCRIFKKTLHQT 240 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 P + + RI + L S+T+IA + G+S S + + F+K +P+ Y+K L Sbjct: 241 PFEYLLRYRIQKSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKKNL 298 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 104/292 (35%), Gaps = 24/292 (8%) Query: 8 APEIATAREQQLFNGKNFHVFIYN---KTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 ++ ++F +++ + + LH HD E + G I + V Sbjct: 1 MTNPYQIKQDVPHRDQDFPFDVFHIIPPGKEVLHLHWHDDLELIYFIRGNATFYIGSETV 60 Query: 65 LLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFFEQHYL---------PLLPYCFV 114 E GD +F+ G H F + + E P Sbjct: 61 KPEPGDLMFVNKGMIHTGFADDEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRF 120 Query: 115 ASQVYRTNNAFLTYV----ETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV 170 + +A+ + + + +I+ + G + ++ + ++ L + Sbjct: 121 FPILLPVTDAYNSLIAGIVKQMIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPTGS 180 Query: 171 PQ-------WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 + ++ + ++ + S+ + R ++ GKT ++ +N Sbjct: 181 ADTVGAELTDRFKELIAFVERHYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVN 240 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +RIN A++ L ++ +T+IAF+ G+ S + F + F++ +P RK+ Sbjct: 241 LLRINAAEQLLIHSSDPITEIAFKVGFGSVNYFSQMFRQYKRHSPSQCRKRY 292 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 104/281 (37%), Gaps = 19/281 (6%) Query: 13 TAREQQLFNGKNFHVFIYNKTESISG----LHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 RE++ + F Y TE+ H H+ E V +G + ++G ++ Sbjct: 5 EYREKREHGTREFPYACYRVTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDA 64 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQ-------HYLPLLPYCFVASQVYRT 121 G I GS H + R + + H P++ + + Sbjct: 65 GCCSLIIGGSMHGGTPKDN-CRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSA 123 Query: 122 NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL------RHYREEQVIDDVPQWLK 175 ++ + VI ++ +E G E V ++ + E D Sbjct: 124 DSEPAKDAKAVIDAMLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRF 183 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 V ++ LE + ++ Y RA + Y GKTP++ +N RI A + + Sbjct: 184 KNVISYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIA 243 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY-RKKL 275 T+ + DIA + G++ S FIK FK + TP+ Y R+ Sbjct: 244 STDEKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRRSF 284 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 103/272 (37%), Gaps = 15/272 (5%) Query: 18 QLFNGKNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 +F +F +FI + E H HD+ E + V G + + + + ++RGD IP+ Sbjct: 11 DIFFNPDFDIFINREVEGFCLSQHTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPI 70 Query: 77 GSHH--QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY------------RTN 122 G+ H + + I N EQ + + S +Y Sbjct: 71 GTSHVFRPSSQDNQLVIYNCIFRTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKF 130 Query: 123 NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMH 182 + FL+ + + + E L+ V+ L+ Y + + P + Sbjct: 131 DKFLSIMHGMFREYLKKGPRYEFLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQYI 190 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + + ++ + S S + R ++ G T MQ + IR+ + L+ T S+ Sbjct: 191 NDHFATNLTVQQVAERSFMSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQ 250 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + A + GY F F+K T TP+ YR+ Sbjct: 251 EAANQVGYQDMKFFHSLFRKKTGVTPREYRRS 282 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 103/294 (35%), Gaps = 20/294 (6%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKT--ESISGLHQHDYYEFTLVLTGRYFQE 58 M N ++ E Q F + Y + H H+ +E V++G Sbjct: 1 MSIAKCNVTVNSSGEEVQKHGTSEFPIAFYEENLSSYSIPWHWHEDFEIIWVISGSIKVS 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL-NVGISKRFF--------EQHYLPLL 109 +N +L + +FI G H +L ++ R + + P++ Sbjct: 61 VNSTEHILNKNQGIFINAGFLHSIHATNDGEYVLRSIVFHPRLIGSIDSIYWQNYIEPII 120 Query: 110 PYC----FVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR--- 162 + + L Y +V + L E G E V +I + Sbjct: 121 QNKNLPYILLDPFINWQDKILAYSISVWNRLYNTENGFEIYVRNELSQLILIVLTNHSIC 180 Query: 163 --EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + + + T+ + + + ++ S+ + R R TP Q Sbjct: 181 EAKPSIRNLRNADRIKTMLQYIQMHFSETITISTLARVALISESEVLRCFHRTIHSTPNQ 240 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + + RI A + L T+ + DIAF+ G+ S S F KTF++ TP YRK+ Sbjct: 241 YLKQYRIQKACQMLIDTDMTSIDIAFQCGFQSSSYFTKTFREQIGCTPLEYRKR 294 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 97/289 (33%), Gaps = 21/289 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIY----NKTESISGLHQHDYYEFTLVLTGRYFQEING 61 + + E + +F Y LH H+ E ++ G+ +N Sbjct: 1 MEKNQYEIYHENKKHTPNDFPYNTYLCSIPLDFKSVNLHWHNEVELIVIKKGQGLVNVNL 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFV------ 114 + GD VF+ G H + + N+ + L F+ Sbjct: 61 VTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFKSSLLKSSGYDLCNDKFIQPLLSG 120 Query: 115 -------ASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY---REE 164 + + +++ + + + + R + V+ F + L + Sbjct: 121 NLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQLAVKSYLFQIFYLLISNCGLNQI 180 Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + I T+ + ++E + S+ Y + + G + +Q +N+ Sbjct: 181 KPISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFYSKSYFMKFFKETMGMSFVQYLND 240 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 R+ A K L T+ + +IA G+ + S F + FKK TP YRK Sbjct: 241 YRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFKKKYGITPGKYRK 289 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 97/295 (32%), Gaps = 21/295 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKT--ESISGLHQHDYYEFTLVLTGRYFQE 58 M + N RE F V Y+ + H HD +E +V G Sbjct: 1 MALSLCNTTTNEHGRELVEHGTVLFPVACYDDDLIKKSVPWHWHDEFEAVIVSEGTALIA 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCF---- 113 K+ L++G+ +FI G H ++ + + + ++ R + + + Sbjct: 61 AGTKKYTLKQGEGIFINAGILHAAWSKNCSICHLHSITFHPRLIGGSIDSIFWHNYVQPL 120 Query: 114 ---------VASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE 164 + +E+ +S G E V +I L Y Sbjct: 121 LTNPIVKHIHLDSSEAWHKEATHAIESAWNSCANEPFGYEFQVHSSLSQLILHLSAYHPV 180 Query: 165 QVIDDV-----PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 + + + + + + S+ R + G P+ Sbjct: 181 ISRQPSEKVLRNSNRLKLMLQFIQDHYHDQINVSMIADTAMISESECLRCFRNIIGIPPI 240 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 Q + + RI A + L TN ++T I + G+ S F+KTF++ TP YRK Sbjct: 241 QYLKQFRIQKAVEFLTSTNETITKIGAKCGFQDTSYFVKTFREQKKCTPSEYRKN 295 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 104/284 (36%), Gaps = 20/284 (7%) Query: 12 ATAREQQLFNGKNFHVFIY--NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A RE F + Y N H H+ +E+ L + G ++N RV L+ Sbjct: 48 AEGREMVQHGSALFPIACYAENLKSYSVAWHWHEEFEYILAMKGPLTVDVNKTRVTLQTN 107 Query: 70 DFVFIPLGSHHQSFYEFGATRIL---------NVGISKRFFEQHYLPLL----PYCFVAS 116 VF+ G H +L G+ F+++ P+L P F+ Sbjct: 108 QGVFLNSGILHAVEQAEKGEALLHSGVFHPRLVGGMDTIFWQKLIRPMLQPDAPAFFLLD 167 Query: 117 QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY-----REEQVIDDVP 171 + L + ++ E V + L + + + Sbjct: 168 EAVPWQAQVLACLREAWQAVAVEPFDYENRVRYYLSAALRLLSTQCVGGKTKVSQQEQIA 227 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + + ++ E +E + A A S+ R+ ++ G TP+Q + + R+ A Sbjct: 228 AERMKQMLRFVEEHYAEELTVERIAASVALSESACLRSFRQMLGITPIQYVKQFRVEKAA 287 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + L T +I E G++ S FIKTF+++ TPK YR K Sbjct: 288 ELLRSTRLKTGEIGMECGFADGSYFIKTFREIKHCTPKEYRAKF 331 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 103/292 (35%), Gaps = 22/292 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEI 59 ++ + E +N +F + S H H +EF L+L G+ + Sbjct: 1 MLKMTLLNDNSEVVSYNFADFPIRAKKSLLSDYPTMAAANHWHTDWEFILLLNGKMSYSV 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFF-------EQHYLPLLPY 111 NGK L+ G +FI H + G + + E + LP+ Sbjct: 61 NGKSYELQEGQAIFINSEQMHYGYSADGSDCNFICILFPPSLISSITRIKETYILPVCED 120 Query: 112 ----CFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE---- 163 F+ + ++ V N + G E V + + L + + Sbjct: 121 TSNPFFILHPEITWQRNLIELLKNVYELCNEEKDGFELHVMSLFNTICFSLYNNIKDSIS 180 Query: 164 -EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 ++ DD + K L + A + + KTP+ + Sbjct: 181 IQETADDKKLEAMHNMTGYIQKNYQKRITLNEIAAAGNVCRSSCCDIFKLILNKTPVSYL 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 E R+ + + L++++ SVT+IA + G++ S F + F K TP YR+K Sbjct: 241 TEYRLEKSIELLKISSLSVTEIALQCGFTGSSYFTEIFHKTLGCTPSQYRRK 292 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 103/280 (36%), Gaps = 22/280 (7%) Query: 16 EQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 E + F +Y E I H H E+ + G +I K + G+ Sbjct: 8 EARAHGDPMFPCNVYRVKEVNGQVIIHCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEG 67 Query: 72 VFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLLPYCFVAS-------------Q 117 +FIP G H ++ + + F L+ ++ Sbjct: 68 LFIPSGHLHGAYPVSDKPFSLYATVVHPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCP 127 Query: 118 VYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLR----HYREEQVIDDVPQW 173 + + LT ++ IS +E G E +++ ++ L E++ Sbjct: 128 THYWMSDMLTMLQATISQFQQKEEGYELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIR 187 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 V + D+ + ++ + L S+ + +R + T ++ I+ R+N A + Sbjct: 188 QIKKVLQFIDEHYDEKLTIKQLANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARL 247 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L T+ ++ DI+ G+ PS FIK FK+ TP +R+ Sbjct: 248 LRETDRTIMDISMSVGFDHPSYFIKLFKRHKRCTPSEFRR 287 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 110/282 (39%), Gaps = 20/282 (7%) Query: 13 TAREQQLFNGKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E + +F + Y+ T + H H E +L G + I+ +++L ++ Sbjct: 5 DYKENKQHGTFDFPIEFYHVTPNHSRYNMPYHWHTECEIIRILEGEFILFIDKEKILAKK 64 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCFVASQVYR 120 D +F+ G H + + +Q Y + +A ++ Sbjct: 65 NDIIFVHSGIFHGGL--PNDCIYECIVFDMKLLLKDNNACTKQIYDIVNHNKVIAHKLPS 122 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR------EEQVIDDVPQWL 174 A ++ ++ + TG E + + +Y+I + + + Sbjct: 123 NVQALNNCCTSLFEAMRVKSTGYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQ 182 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 V + + E + LE++ S S +Y R KTP++ +N RI + ++L Sbjct: 183 LKNVITLIENEYQNPLTLEDLSKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKL 242 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 T S+T+IA G++ S FIKTFKK TPK Y K L Sbjct: 243 LATELSITEIALNCGFNDVSYFIKTFKKHKGVTPKQYLKSLK 284 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 213 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 108/303 (35%), Gaps = 26/303 (8%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYF 56 M V ++ +E + + H +Y ++ H HD +E + G Sbjct: 1 MPKVEKMDLDSSLKETITYESQMLHYGLYTAGYQRVFQADIPWHWHDEFELGYISGGSVV 60 Query: 57 QEINGKRVLLERGDFVFIPLGSHHQSFYEFG--ATRILNVGISKRFFEQHYLPLLPYCFV 114 + +G V L GD +FI G H R+ K F LL +V Sbjct: 61 YQTSGLTVTLHEGDGIFINSGVLHYLHPLEPCREARLQTQFFDKSFLAGSLGSLLDIKYV 120 Query: 115 AS----------QVYRTNNA---FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY 161 A +YR++ FL ++ + + +E E + + + + + Sbjct: 121 APVLDQRQLEAVPLYRSDPESKGFLECLQKGVELCSRKEEFFELRLRNLFSELWESIYRW 180 Query: 162 REEQVID------DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 ++ + + + + ++ ++ A S+ R Q G Sbjct: 181 AAQKESSTPSLRRSIEDDRIKQMMRYVQAHFSEKISVSSIAASIPISERECYRLFQNSMG 240 Query: 216 KTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 TP++ + +R+ A+ L TN S+ DIA E G+ S S F K F+ TP YR Sbjct: 241 ITPIEYLISVRLQNAQSLLMNTNKSILDIALETGFGSSSYFGKIFRSHHRLTPAQYRNLS 300 Query: 276 TEF 278 + Sbjct: 301 RQK 303 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 93/281 (33%), Gaps = 17/281 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 A +E + + Y+ +H HD E V G EI+G++ Sbjct: 1 MYAELKENHPHGTREYPFCEYHMRYFPHAFQIPVHWHDEMEIIYVRKGPLTVEIDGQKFT 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN-- 123 E G G H F L T Sbjct: 61 GEDGSVFIASPGVLHMMSAPDTPVDYFTFIFPLEFISFQTKDALEDEVFFPLRNHTRGFR 120 Query: 124 ----------AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE-EQVIDDVPQ 172 + ++ ++ T + V + +++ L Y + E++ + Sbjct: 121 PEVADRKLLGKLIPILDELVEENGKMGTHRQIQVRIRLLQMMDLLVEYSQLEELTRNASG 180 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 L+ + L + S++Y++R + T Q +N +R+ +A+ Sbjct: 181 ELEKEILLYIQDNYHDNIGLAELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVRLRYARH 240 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 LE T+ SVT+IA ++GY + S FI+ F +P YR Sbjct: 241 LLESTDLSVTEIAMKSGYQNVSYFIRRFSSAMGESPLRYRN 281 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 105/285 (36%), Gaps = 19/285 (6%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGL---HQHDYYEFTLVLTGRYFQEINGKRVLLE 67 + + + Y++ + H HD+YE +L+G I + + Sbjct: 1 MTKPFRADYHDPTGYLSMEYDRRIGYFSMSADHLHDHYELYYLLSGERIYFIKDRSYRVR 60 Query: 68 RGDFVFIPLGSHHQSFYEFGATR-ILNVGISKRFF----------EQHYLPLLPYCFVAS 116 GD VF+ + H++ L + I+ F E P + Sbjct: 61 AGDLVFVDRNAVHKTLDSGRPDHDRLVLYINPELFADLAVPPELAEGLKEPFGWDVPILR 120 Query: 117 QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQW--- 173 + A V +++ + + G L+ T ++ R ++ Sbjct: 121 LPSPASEAVERMVGDMVNEMIHPQAGSSWLLRHRTVELLLFAYRSRHLGMVRSADTEPVL 180 Query: 174 --LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 V + + L + S YL+R ++ G T +N +R+ A+ Sbjct: 181 HPKTQAVVRYLNDNYRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQ 240 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + L ++ S+TDIA+ +G+S+ S F K FK+ +P++YR++ Sbjct: 241 RLLRESDDSITDIAWRSGFSNFSHFGKMFKRTVQLSPRAYRQQYR 285 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 106/269 (39%), Gaps = 16/269 (5%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 +N +Y + H H + E G ++NG+ + GDFV I H Sbjct: 12 RNLPFSVYIAQDEKFSWHCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVIIHTMEDHTL 71 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQV-----------YRTNNAFLTYVET 131 ++L V + + + P ++ + + + + Sbjct: 72 I-RNSDCKLLGVQMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRRIRVPKGSLLESILSE 130 Query: 132 VISSLNFRETGLEELVEMVTFYVINRLRHYRE----EQVIDDVPQWLKSTVEKMHDKEQF 187 ++ ++ G E ++ + + L + E+ ++ V ++ Sbjct: 131 ILVEYQKKQPGYEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDYMEQHIE 190 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 +E ++ ++ S + R ++ GKT ++ N IRI A+K L T+ ++T+IAFE Sbjct: 191 TELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTITNIAFE 250 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G+ S + F + FKK T P +YRKK+ Sbjct: 251 TGFGSVAYFNRVFKKETGQAPANYRKKMR 279 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 104/283 (36%), Gaps = 18/283 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +E + K+ IY+ +H HD +E V +G I+G+ + Sbjct: 14 MYFELKENKPHGTKDNPFSIYHIENAGRSFQIPVHWHDEFEIIYVKSGLLTVSISGESYI 73 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY------ 119 + GD + G+ H + G ++ +L + Sbjct: 74 GKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMIN 133 Query: 120 -RTNNAFLTYVETVISSLNFRETGLEELVE-------MVTFYVINRLRHYREEQVIDDVP 171 R ++ E +I E + ++ +++ + + Sbjct: 134 PRVKDSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDTSGR 193 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 ++ + + + +L+ S++Y++R + ++ T Q I +R+ AK Sbjct: 194 NIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAK 253 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + L+ T+ SVT+ A ++GY + S FI++FKK +P YR Sbjct: 254 QLLQDTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRNS 296 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 95/269 (35%), Gaps = 17/269 (6%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 S+ G H HD +E +++G I + + GD V IP+ H++ Sbjct: 16 IEAAKQPGRFSMDGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSP 75 Query: 85 E---FGATRILNVGISKRFF-------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVIS 134 + V E+ L V + +++ Sbjct: 76 SGKLSQPHERILVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLA 135 Query: 135 SLNFRETGLEELVEMVTFYVINRLRHYREEQVIDD-------VPQWLKSTVEKMHDKEQF 187 + G EE +++ ++ L + D P + V + + Sbjct: 136 EQKQQAGGYEEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYD 195 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 +L ++ S YL+ R G T + IN +RI A L T VT+IA+ Sbjct: 196 ENLSLSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYR 255 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 GY S + F + FKK + +P+SYR++ Sbjct: 256 VGYQSGTHFGRVFKKAKAVSPQSYRREQR 284 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 97/287 (33%), Gaps = 23/287 (8%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESI---SGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 + E + + +++ T I LH H+++E V +G I G+ Sbjct: 1 MRSDLWENTVMTDPALPINVFHPTFGIGCSLPLHWHEHFELIYVESGEVLYTIGGQPFPT 60 Query: 67 ERGDFVFIPLGSHHQSFY--EFGATRILNVGISKRFFE-------QHYLPLLPYCFVASQ 117 + GD +F+ G H + + + + P + + Sbjct: 61 KPGDMLFVNSGELHSAASLNPNEPFTVYALVFNPSILGLKEPHIVDLVAPYTNGMSMIAS 120 Query: 118 VYRTNNAFLTYVET----VISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVP-- 171 ++ ++ + + G E V + L D Sbjct: 121 RIEQTDSLYPLLKQTTLRLAGEFEQKPRGYELAVRSYCQLLFTWLSREFTVMQRSDTEMN 180 Query: 172 -----QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 + + + +E + S + R ++ G+T +Q +N R Sbjct: 181 AFRARTNRFKELLTRLESDVAERVTVEQAASFVHMSPYHFCRMFKKITGQTFVQYMNLNR 240 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 IN A+ L+ T SVTDIA E G SS + F K F++L +P+ RK Sbjct: 241 INRAEYLLKNTAMSVTDIAAEIGCSSINSFSKLFRQLRGVSPRDLRK 287 >UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C6D193_PAESJ Length = 833 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 87/267 (32%), Gaps = 8/267 (2%) Query: 14 AREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 + + + V ++ + H H E VL G ++ ++ L D + Sbjct: 3 YHYEFVETQDDLPVRLFVNSVKDIRFHWHKEIELIYVLQGAVTVYVDQRQYRLAEDDIIA 62 Query: 74 IPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN-NAFLTYVETV 132 I S H+ +L + + ++ R + + + Sbjct: 63 INSMSVHKLECTNLDNVLLTLQFGPELLDDEGTLFDCNSMSQTEYNRYRYDRLRRCLARM 122 Query: 133 ISSLNFRETGLEELVEMVTFYVINRLRHYR-------EEQVIDDVPQWLKSTVEKMHDKE 185 + N + G +I L Y + D + + + DK Sbjct: 123 VWESNKKGPGHRNYSMGSLQTLIGHLTRYFTAGTNGGPREKGKDYDYMRLNRIIQYVDKH 182 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + L+ + S Y + G + + IR+ A QL T+ S+T IA Sbjct: 183 YNEKITLQTIADQEHLSLHYFSHFFSDKIGIPFQKYLTLIRLEKAAAQLSDTDKSMTQIA 242 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + G+++ LF + FK TP SYR Sbjct: 243 LDCGFANVKLFNQYFKGKYGSTPGSYR 269 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 113/274 (41%), Gaps = 20/274 (7%) Query: 23 KNFHVFIYNKTESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 KN H+ ++ + E+++ LH+H +YE V G N + ++ G+ + + + Sbjct: 52 KNLHISLHPRPENVNPKMLLHKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPNTA 111 Query: 80 HQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY----------RTNNAFL--- 126 H + N+ + FF+ LL + S + R FL Sbjct: 112 HCPETLTDQDCVFNIMFRQNFFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLPGK 171 Query: 127 ---TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-H 182 +E +I +++ E + + + + L + + ++ + + Sbjct: 172 ASADTIERLIVECFEKQSCYETITQSLLVELFAYLARNSDNSFSYPKNNHERLILKIITY 231 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +E +E L+ + S YL+R ++Y GK +I+ + R+ AK LE ++ S+ Sbjct: 232 IQESPAEITLQKVSEQFQYSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLSIL 291 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 DIA GY+ S F K FK+ TP YRK + Sbjct: 292 DIALILGYNDVSHFYKVFKQEIGCTPTEYRKHYS 325 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 108/289 (37%), Gaps = 18/289 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +E + K+ Y+ +H HD +E V +G I+G+ + Sbjct: 1 MYFELKENKPHGTKDDPFSTYHIENAGQSFQIPVHWHDEFEIIYVKSGFLTVNISGENYI 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY------ 119 + GD + G+ H + G ++ + +L + Sbjct: 61 GKPGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMIS 120 Query: 120 -RTNNAFLTYVETVISSLNFRETGLEELVE-------MVTFYVINRLRHYREEQVIDDVP 171 + E +I +++ E + ++ +++ + Sbjct: 121 PSVKDTIKELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGR 180 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 ++ + + + +L+ S++Y++R + ++ T Q + +R+ +AK Sbjct: 181 NIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAK 240 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 + L+ T+ SVT+ A +GY + S FI++FKK +P YRKK + Q Sbjct: 241 QLLQDTDISVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKKQVDCMQ 289 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 107/289 (37%), Gaps = 22/289 (7%) Query: 9 PEIATAREQQLFNGKNFHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 I T +++ F+ F + + + GLH H++ E ++ G+ L Sbjct: 3 EMIPTLKKEDWFHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELV 62 Query: 68 RGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTN 122 GD I H + ++N+ L F +R Sbjct: 63 TGDTFVIGGDRPH-DYLNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKR 121 Query: 123 NAF--------------LTYVETVISSLNFRETGLEELVEMVTFYVINRLRH-YREEQVI 167 + F L YVE++ L R G + + ++ L Y + Sbjct: 122 HQFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCYIRTRNP 181 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + + + +L+++V +S S+ R + +P++ + ++RI Sbjct: 182 ESKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRI 241 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A + L T+ S+TDIAF+ G+S + F + F+ +P+ YRK++ Sbjct: 242 QEASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 105/283 (37%), Gaps = 7/283 (2%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEI 59 M + RE + + ++ + S H H E L+G + Sbjct: 1 MSTQRFDIRHAPAPRE----SFRLLYISKSRFGGDWNSTTHTHSCTELFYCLSGEGQFYL 56 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGI-SKRFFEQHYLPLLPYCFVASQ 117 G+ ++ D V + H + +G+ S F Sbjct: 57 AGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVASMEFLFSKADTNYAIFNCREN 116 Query: 118 VYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST 177 R + SL+ ET ++L+E++ +++ + + + Sbjct: 117 RERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVRCTTISLQLEEAAPTENRECAE 176 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 +++ D + +L+ + L+ ++ YL QR YG +P+ +N RI +K L T Sbjct: 177 IKRYLDTNYREDISLDLLAELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNT 236 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 YS+ I+ G+SSPS F + F+K TP YR++ + + Sbjct: 237 GYSLAQISELMGFSSPSYFSQCFRKAEGMTPNEYRRQTRQGKR 279 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 103/280 (36%), Gaps = 17/280 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 T +E + K++ Y+ +T +H HD E + G I+ + Sbjct: 1 MYLTLKENRNHGTKDYPYSQYHVFNQQTAFQFPIHWHDELEIIYIRNGSINITIDNELFT 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS--------- 116 G F + G H + F + Sbjct: 61 GTGGSFFIVNPGELHYMGSNDLNADYYTILFPLEFISFQSNDYVENMLFKPMRSSHVILT 120 Query: 117 ---QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVP-Q 172 ++ +E +I + + + +++ +++ + + V Sbjct: 121 HSLPYSEIYAEIISLLEKLIYINKYEKGFYQLDCKILLLEILSNILSIPDILVKKTSNAS 180 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 ++ + + + L ++ S++Y++R ++++ T + +N +R+ +AK Sbjct: 181 DMRREIITYVNDNYLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKN 240 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L+ TN S+TD+A +G+ + S FI++FK+ TP SYR Sbjct: 241 LLDTTNISITDVALSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z0_9FIRM Length = 302 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 113/290 (38%), Gaps = 22/290 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEI 59 +I + + E ++ ++I + + H HD E+ ++TG+ + Sbjct: 3 LIRTELMPDSSEVVPYDHAGIPLYIRAAHLASYYNMCAPCHWHDDIEWIYIITGKMRYYV 62 Query: 60 NGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFF-------EQHYLPLLPY 111 NGKR++L GD + + H + +E L + F E+++LP Sbjct: 63 NGKRLILNEGDSLMVNARQMHYGYAFEQQDCYFLCILFHPSLFGNNQILQEKYFLPFFEN 122 Query: 112 CFVASQVYRTNNA----FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY-----R 162 + + +N+ Y++ V+ ++G E V + + L Sbjct: 123 TSLEFHHFYSNDEAGVKVGRYLQEVLLLKEDSDSGYELGVISCMLELWSFLIRTDLLSAA 182 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + + + ++ + + + +L ++ A + + + Y ++P+ + Sbjct: 183 KNKSESEQELNIQKDMVSFIYQHYPEKISLTDIAAAGHVGRSKCCQIFKHYMQQSPVDFL 242 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 N R+ + + L T S+T+IA G++ S F K F + TP+ YR Sbjct: 243 NTYRLKISCRLLCTTQKSITEIAILCGFNHLSYFSKYFMECYGCTPREYR 292 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 101/273 (36%), Gaps = 21/273 (7%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 + H H+Y+E V G V L +GD + + H + E Sbjct: 59 PHLYNPNYQDERLFHNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTE 118 Query: 86 FGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTN-------------NAFLT 127 + N+ +SK F+ P + F Y+ N + Sbjct: 119 HPQDVVFNIMLSKEIFQSDVFPCMTDNRLLFHFFLDYFYQLNKLDDSLTFPHSPKHPIEP 178 Query: 128 YVETVISSLNFRETGLEELVEMVTFYVINRLRH-YREEQVIDDVPQWLKSTVEK--MHDK 184 ++ ++ + + +++ + L YRE D L TV H + Sbjct: 179 LIKLMVEEFIEDDLCYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIHLIYHMQ 238 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 + + +LE++ S +++R + GK+ +++N +RI AK LE T+ + +I Sbjct: 239 QHLRQLSLESLAEAFHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEI 298 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 A G + S K FKK TP YRK+ + Sbjct: 299 ADSIGVNDTSYLNKIFKKKYGLTPLQYRKQFQQ 331 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 92/294 (31%), Gaps = 23/294 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIY----NKTESISGLHQHDYYEFTLVLTGRYFQEING 61 +N+ E E + F Y + LH H++ E + G+ ++ Sbjct: 1 MNSLEYENLLENKTHADPMFPYNTYLCSIPLDFNSVSLHWHEFMEIIYIKKGKGNVTVDF 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCFVASQV-- 118 +E GD + I G H G + N+ S F L F + Sbjct: 61 TTHYVEEGDIIIILPGHIHGISQHEGYSMEYENILFSVDMFRSKNHDSLDSEFFLPLLAG 120 Query: 119 -----------YRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVI 167 + + V + G ++ F L + Sbjct: 121 DVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETPKGYHLALKGCYFEFFYVLFTNSTVRDE 180 Query: 168 DDVPQW-----LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 D + D+ ++ ++ + S+ + R + G + + + Sbjct: 181 ADRKNRSRDLERTKLILSYIDENYKEAISITDIASYCGFSESHFMRFFKNTMGVSFVSYL 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 N+ R+N A + L + SV +A G+ + S F + FKK TP YR+ Sbjct: 241 NDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNRMFKKKYGVTPSRYRETHN 294 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 98/291 (33%), Gaps = 22/291 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEI 59 +IN + A E ++ ++I S H H+ E V+ G I Sbjct: 1 MINTDIMQDASEIVHYDNPGVPLYIRTGILSNYPDMKALCHWHEDIELIYVIEGEMNYRI 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYE-FGATRILNVGI-------SKRFFEQHYLPLLPY 111 N + +LL+ D + + H + R + + S + ++ + P + Sbjct: 61 NDRDILLKEKDCLVVNSRQLHYGYAHLRRECRFICILFHPGLLNASPKIYQYYVAPFIEN 120 Query: 112 CFVASQVYR----TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL-----RHYR 162 +A Y + + ++ + E + + L Sbjct: 121 KNIAYFHYAADSANHEQVQALLNRILLLKTEEKDAYELEAISTLYLLWRILFLQHKSLLE 180 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 +E D L+ + + L+ + A S+ +RY ++P+ Sbjct: 181 QEPAYDYSDLTLQKKMVSYIYEHYQDTLTLDAIAASGNISRSKCCIIFKRYLRQSPIDFA 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 N+ R+ ++ L T S+ IA G++ S F K F + TP YRK Sbjct: 241 NKYRLEVSRYLLANTRSSIAQIAVSCGFNHLSYFSKLFCREYGCTPTEYRK 291 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 98/284 (34%), Gaps = 23/284 (8%) Query: 12 ATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 +E+ + NF + I+ ++I LH H+ +E+ V GR +++ + + Sbjct: 4 EMLKEKVMHGDDNFPIGIHKTDIDKGRDNILYLHWHEGFEYLTVTKGRAVFKVDDLEIEV 63 Query: 67 ERGDFVFIPLGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYR----- 120 +G+ +FI H + V F + + F+ + Sbjct: 64 SKGEGIFINSNVLHSAHSINEEECSFFAVVCHPAFLSSYINDCINQRFINPILNHSLYFP 123 Query: 121 --------TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ----VID 168 L + V +E G E L++ + + ++ Sbjct: 124 IHLKKDVDWQRNILLLLTQVYDINKEKEFGYELLLKSKIYEIWFECIKNAKKSINKGSNT 183 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 V + F++ + +L S E+ R + T + +N RI Sbjct: 184 SYKTERMKVVLNYIHENYFNKIVVSEFASLVHMSDEHFCRFFKAMTHFTLVSYVNRYRIE 243 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + L TN +++IA + G+ S F K F+K+ TP YR Sbjct: 244 RSCVFLSQTNKKISEIAGDVGFGDISYFNKVFRKIMGCTPVDYR 287 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 106/283 (37%), Gaps = 7/283 (2%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEI 59 M + RE + + ++ + S +H H E L+G + Sbjct: 32 MSTERFDIRHAPAPRE----SFRLLYISKSRFGGDWNSTVHTHSCTELFYCLSGEGQFLL 87 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISK-RFFEQHYLPLLPYCFVASQ 117 +G+ ++ D V + H + +G+S Sbjct: 88 SGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVSGIEILFGKADSTYAIFNCREN 147 Query: 118 VYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST 177 R + SL+ ET ++L+E++ +++ + + Sbjct: 148 RERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVRCTTLSLQVEESPRSDNRECVE 207 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 +++ D E +L+ + ++ ++ YL Q+ YG +P+ +N RI +K L T Sbjct: 208 IKRYLDNNYREEISLDTLAEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNT 267 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 YS+ I+ G+SSPS F + F+K TP YR+++ + + Sbjct: 268 GYSLAQISELMGFSSPSYFSQCFRKAEGLTPNEYRRQVRQGQR 310 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 98/300 (32%), Gaps = 24/300 (8%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRY 55 M Q +I ++ +LF F + H H+ E V +G Sbjct: 1 MEQQIIEIIVDENKQQLELFGTPMFPCKACYSDINKFVTGDISWHWHEEIEVIRVKSGSI 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYLPLLPYCFV 114 ++ +L GD VFI H ILN + +K + FV Sbjct: 61 HLYLDNSDFVLNEGDGVFINSNILHYIRAGTSEECILNSLVFNKNLISGGVQSVFEQNFV 120 Query: 115 ASQVYRTN-------------NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY 161 V N ++ S E G E LV ++ + Sbjct: 121 NPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEFGYEILVREYLSHIWYIMLKN 180 Query: 162 RE-----EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK 216 + + +D+ + K + L ++ + S+ R + G Sbjct: 181 IQDLNLNKNNRNDLNSERIKNILSFVHKNYNKQITLNDIAKVVNLSERECLRCFKNTLGI 240 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +P+Q I + R++ A K L +T I+ G+ SPS F K FK+ TP YR K Sbjct: 241 SPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSPSYFSKIFKRFIGITPTQYRNKSK 300 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 98/275 (35%), Gaps = 10/275 (3%) Query: 7 NAPEIATAREQQLFNGKNFH-VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 N T+ + + + + + S H H + E VL+G + + Sbjct: 3 NIRHTFTSPLRHDHTCHLLYSTYSKYEEDWSSYPHTHYFTELFFVLSGSGSFLVEDETFP 62 Query: 66 LERGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA 124 + + D + I H + +G+ F ++ + Sbjct: 63 IAKHDLIVINPNITHTEKSSLEDPLEYIVLGVDGLNFVIDDANE----YLLFHSDEMKDR 118 Query: 125 FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ----VIDDVPQWLKSTVEK 180 Y T++ + E++ + + ++ L Y + S ++ Sbjct: 119 LDFYFRTILEETENSQKDYEKVCQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKR 178 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 D L+ + ++ ++ Y + YG +PM + + RI +++ L T+ S Sbjct: 179 YIDSSFRENITLDKLAEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMS 238 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + IA + G+SS S F + F+K TP +YRK+ Sbjct: 239 LAQIAQQCGFSSSSYFTQCFRKSCGMTPTAYRKQF 273 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 98/283 (34%), Gaps = 20/283 (7%) Query: 14 AREQQLFNGKNFHVFIYNKTESISGL---HQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E+ + Y I H HD E + +G +N + + ++ GD Sbjct: 1 MKERSSHGSFELPIETYTDNCEIFHSLYNHWHDEMELIYIESGSGLVRLNKEILRVKAGD 60 Query: 71 FVFIPLGSHHQSFYEFGATRIL-NVGISKRFFEQ-------------HYLPLLPYCFVAS 116 + + G H + ++ F + + S Sbjct: 61 LIIVNRGVLHGIKTDLKNILYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHIIS 120 Query: 117 QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWL-- 174 + + + S ++ ++ + F + D Sbjct: 121 RSDDNYGNICLLFDRIHSCHKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDENKSLA 180 Query: 175 -KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + + + ALS S+ Y + ++Y GKT + IN++RI AK Sbjct: 181 SIKKILDYINLNYSQPLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPM 240 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 L ++ SVT+IA E G+++ S FIK F++ T +P +R+ L+ Sbjct: 241 LLHSDSSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRNLS 283 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 101/290 (34%), Gaps = 21/290 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEIN 60 IN P E ++F + Y E H H E V G+ +N Sbjct: 3 INQPAALAYYEAANHGTEDFPLAYYPNLVSVWREFFFVPHWHKEIEILCVHQGQLELVVN 62 Query: 61 GKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY 119 G ++ V IP + H ++ + R + S++ + + + Sbjct: 63 GFSRKIKANTIVLIPPNTLHTAYRIAQQSCRFSCIVFSEQLITSRQSDRIQSQQIDPFLI 122 Query: 120 R-----------TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID 168 + + LT + + + E ++ + +++ L +Q Sbjct: 123 QEGVTSYVDFPDKSQQSLTLFQLFDQCFMGKSSYRELRLKGIVIQLLSHLLEVGTDQPAK 182 Query: 169 DVPQWLK----STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + L+ V L+++ + S+E TR ++ + +PM +N Sbjct: 183 KSSERLQEKREKIVLSYIHSNYHEMIQLQDLADSVSLSKEQFTRFFKQSFRTSPMAYLNH 242 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 R+ + + L T+ ++ IA G+ + + F FKK+ TP YRK Sbjct: 243 YRLIRSAELLRETDLTMVAIAQAVGFCNSNHFSVCFKKMFGETPTQYRKN 292 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 94/263 (35%), Gaps = 16/263 (6%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 K H H++ + ++G E ++ D V + H Sbjct: 26 KNGQNFPRHWHEHLQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLESTSDNLVF 85 Query: 92 LNVGISKRFF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETG 142 + F ++ P+ + + + N V+ V+ ++ G Sbjct: 86 YTIRFEPSFLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIG 145 Query: 143 LEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE-------KMHDKEQFSESALENM 195 E ++ +Y++ L + ++ K ++ +K+ + L + Sbjct: 146 YELAIKGYIYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSKL 205 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S + R+ ++ GKT IN IR++ + L+ T+Y++T+IA G+ + + Sbjct: 206 ANTVGLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNY 265 Query: 256 FIKTFKKLTSFTPKSYRKKLTEF 278 F + FKK S +P YR Sbjct: 266 FSRIFKKYHSTSPSQYRNLYKNL 288 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 101/299 (33%), Gaps = 25/299 (8%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRY 55 M V+ E ++ +F + N G H H EFT +L+G Sbjct: 1 MGNKVLKIGENK-LENREYARNNDFPFRVDYEEITNYIGYSFGCHWHPEVEFTYILSGSM 59 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFV 114 + N + L++ GD +F+ H + R + + + + ++ Sbjct: 60 IYQANNTQHLVKAGDVIFVNQNCLHSGKASNDCSCRYFAITFNPTLISGYKSSIFENKYI 119 Query: 115 -------------ASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY 161 + N ++ + + + G E L+E F + L Sbjct: 120 GEIINSDRIPFVYFEGSKKENEQIVSLLMRLEELYREKAEGYELLIESKLFELWFYLYRD 179 Query: 162 REEQVIDDVPQWLKSTVE-----KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK 216 +V D++ + K+ ++ L+++ S+ R ++ Sbjct: 180 VYCKVPDELIKQTKNIMQIKAALDYIHDNYKENLTLDDISEACNLSKSSCCRLFKKIVHG 239 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 TP + RI + L ++T+ A G+SS S + + FKK TP Y+ + Sbjct: 240 TPFNYLLSYRIQRSIPYLLSEGMNITEAALSVGFSSSSYYSEIFKKYMKCTPTEYKNNV 298 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 102/290 (35%), Gaps = 20/290 (6%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTES-----ISGLHQHDYYEFTLVLTGRYFQEI 59 +++ + +E F + +Y T S H HD Y+F+ V G + I Sbjct: 8 IVDVKIDRSNQELTNHGDFTFPLAVYKNTLSKNLLGYVIWHWHDEYQFSYVTQGEIYFYI 67 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFF---------EQHYLPLL 109 N + +L+ G +FI G H + + + I K+ F +++ L Sbjct: 68 NDQTFILKEGQGIFINTGCMHSIKAVNDPESTYVCINIDKKLFSSFKGSVIEQKYLNTLT 127 Query: 110 PYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINR-----LRHYREE 164 + + ++ + + E + + + L Sbjct: 128 QSAIFLDLSEEWHIECINKLKDIYQFYVDKSFSFEIDICINLMQTLALVVKNALNPILLT 187 Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + + + + LE + ++ R +R T + + E Sbjct: 188 TIESKDEYQKIKKILSFLHQHYAEKITLEQIAQHIFLNKNECCRLFKRKTKMTIFEYLLE 247 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 R+N + + L ++ S++ IA + G+S+ S +I TF K TP YRK+ Sbjct: 248 HRLNKSIELLIHSDKSISQIAIDTGFSTVSYYIDTFHKNVGITPNEYRKR 297 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 95/245 (38%), Gaps = 7/245 (2%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL 92 + H HD+ E V G + GK+ L GD V + G+ H+ + A L Sbjct: 31 PNWFNIQHSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLRL 90 Query: 93 NVGISKRF----FEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE 148 + F L Y ++ YR Y+ ++ + + +E+ + Sbjct: 91 IFLAIRDFAVPGLPAGCLSQEKYRVLSCGEYRYKMDI--YLRELLQETSSQIEFYQEISQ 148 Query: 149 MVTFYVINRLRHYREEQVIDDVP-QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 + ++ + D+ +++ D+ S L+++ S+ YL+ Sbjct: 149 GLVSALLVLVMRLIRINPEDEAALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLS 208 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 + G +P++ + R+ A + L T V++++ GY +P F + FK++ + Sbjct: 209 HLFKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGIS 268 Query: 268 PKSYR 272 P YR Sbjct: 269 PVKYR 273 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 93/266 (34%), Gaps = 19/266 (7%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 + LH H+ E TL+ +G + +I+ + +E+GD + I H + G + Sbjct: 2 PNSYRNLSLHWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSM 61 Query: 91 IL-NVGISKRFFEQHYLPLLPYCFVASQVYRT-------------NNAFLTYVETVISSL 136 + ++ F F+ +++ Sbjct: 62 VSDSLVFHLDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECF 121 Query: 137 NFRETGLEELVEMVTFYVINRLRHY-----REEQVIDDVPQWLKSTVEKMHDKEQFSESA 191 N ++ G E + + + L Y E + + V Sbjct: 122 NGKQYGYELYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETLT 181 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E + ++ SQ + +RY G T M+ IN RI A L T V DIA E G+ Sbjct: 182 IEELSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFR 241 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLTE 277 + S F K FK+ TP SYRK E Sbjct: 242 NISYFNKVFKERFGVTPGSYRKNSRE 267 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 101/280 (36%), Gaps = 12/280 (4%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 + FH + + H H YE +L G ++ K Sbjct: 3 DLDHNEDRPRGTYEFPFEFHHIDHTHPRYVMSYHWHVEYEIIRILEGSLTVTLDEKSFTA 62 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRF-----FEQHYLPLLPY-CFVASQVYR 120 + D +F+ G H + + ++ ++ +L + Sbjct: 63 VKNDVIFVHSGILHSGIPHDCVYQCIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSD 122 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL--RHYREEQVIDDVPQW----L 174 + L + + ++ ++TG E V ++ + HY E + Sbjct: 123 EHPQILNCISVLFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQ 182 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 V + +K + L+ + A + S +Y R +TP+ +N RI A QL Sbjct: 183 LKQVLEFIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQL 242 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 T+ S+T+IA+ G++ S FI+TFKK TP Y+++ Sbjct: 243 AATDDSITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 94/248 (37%), Gaps = 4/248 (1%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 +++ H H+YYE + G + + ++ G+ + H+S+ E + Sbjct: 36 NDNMMKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKR 95 Query: 92 LNVGISKRFF--EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEM 149 + + ++ L + T +E +I + Sbjct: 96 IVLYFESSEVASKELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRT 155 Query: 150 VT-FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTR 208 + ++ L H R + + + + LE + SQ YL R Sbjct: 156 LLNMFLFTMLMHTRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQKFYVSQFYLCR 215 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 +RY T +Q +N R+ A+++L T+ ++T+I+ E G+S+ + F + FK +T TP Sbjct: 216 EFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGTTP 275 Query: 269 KSYRKKLT 276 YRK Sbjct: 276 SGYRKHHQ 283 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 111/275 (40%), Gaps = 28/275 (10%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 H+ +N++ H+HD++E V+ G ++G+R+LLE+GDF + + HQ + Sbjct: 93 HIPFFNRS---PQPHKHDFFELVYVVRGSMKNVVDGRRILLEQGDFCLMNPNAVHQVETD 149 Query: 86 FGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNNA---------------F 125 +N + K F + +L + L F +Y N Sbjct: 150 GKDPLAINFLMKKELFNKAFLSIVLENELFANFFVDSIYHKKNKQNYLVFSARHLEEPII 209 Query: 126 LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ----VIDDVPQWLKSTVEKM 181 Y+ + + + ++E + + + + D+P S + Sbjct: 210 SQYLLQIFREYENDQLYSQRVIESAMSCLFVEFTRSYKRELEFESLQDLPGGNISKIISY 269 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + + L+ +YL ++Y G++ +I+ + R+ A + L+ T + Sbjct: 270 LSENY-RTATLQTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQFRLAHACELLKQTELPI 328 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +D+A E+GY++ + F K F++ +P YR + Sbjct: 329 SDVAQESGYTNRTYFYKVFQQKFGMSPNDYRHQNQ 363 >UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEF5_ALKOO Length = 854 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 104/271 (38%), Gaps = 13/271 (4%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 ++F + + +H H E LVL G + + LL+ D + I + Sbjct: 12 EDFPIRGSIYSIEGFKVHWHSAVEILLVLQGNVSLGVGDHKYLLKENDLILINYNEIYSI 71 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQV------YRTNNAFLTYVETVISSL 136 +L++ I Q+ F + Y+ V+ Sbjct: 72 TRGKEDNLLLSLQIDPVTLSQYDPNFSRLVFDCKSFMYCKDNQEKFDVVRYYMAKVVWEY 131 Query: 137 NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLK-------STVEKMHDKEQFSE 189 + ++ G + + + L + + ++ + +K + ++ + Sbjct: 132 SKKKPGYQLRIASNIHLLAAHLVNNLTNENLNQLKSEIKDKDLARLKRILSYINENIDKK 191 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +L+ + S YL+R + G T + IN +R++ A L +N ++T++++E+G Sbjct: 192 ISLKTIAKNEHISYFYLSRFIKDNLGVTFQEYINTLRLDKAVNLLLSSNKTITEVSYESG 251 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 +++ LF K FK+ +P Y+K E ++ Sbjct: 252 FANIKLFNKLFKETFGASPLQYKKIHKESSE 282 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 102/255 (40%), Gaps = 6/255 (2%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF-GA 88 + + S LH H + E V G +I ++ DFV I + H Sbjct: 28 KYEGDWHSQLHSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIINPNTMHTEVSRDRNP 87 Query: 89 TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE 148 + + I FE L Y Y+ N L Y+ ++ + +++ + Sbjct: 88 LEYIVIAIDGISFEIPEDSLKDYISCNYANYK--NEILFYLNLMVKESQAKNELYDDMCQ 145 Query: 149 MVTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVALSAKSQEY 205 + ++ + V + ++ ++ D+ E L+ + + ++ Y Sbjct: 146 QLMQVLLINILRLNRINVSLTQGKTIRKEIFMIKNYIDRNYHKEITLDTLAEKTHMNKFY 205 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L + G +P+ + + RI +K L T+ S++ I+ G+SS S F + FKK T+ Sbjct: 206 LAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGFSSLSYFAQAFKKSTN 265 Query: 266 FTPKSYRKKLTEFNQ 280 F+P YRK ++N+ Sbjct: 266 FSPLQYRKNHQKYNK 280 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 11/249 (4%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNV 94 + H H YYE +L+G+ IN LE GD IP H++ YE + Sbjct: 32 MKRPHYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGI 91 Query: 95 GISKRFFEQHYLPLLPYCF---VASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVT 151 S+ F + + F +E +++ + E + ++ Sbjct: 92 YFSRDTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQL 151 Query: 152 FYVINRLR-------HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 +++++ R E + + + ++ L + A + S Sbjct: 152 CSLLHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPT 211 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y ++ + G + +N IR+ A L T+ SVT +A G+S + F F++LT Sbjct: 212 YFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLT 271 Query: 265 SFTPKSYRK 273 +P+ YRK Sbjct: 272 GVSPREYRK 280 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 106/305 (34%), Gaps = 38/305 (12%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISG--------LHQHDYYEFTLVLTGRYFQ 57 + +I +E +L F Y + S H H+ E G + Sbjct: 1 MKHSDITPLKENRLHGTAAFPCACYQADSAASPAGTPFLAKHHWHEELEIIYFEQGCFHL 60 Query: 58 EINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPL 108 EIN ++ +E F I G H + E R + S E+ PL Sbjct: 61 EINMEKYEIEEECFCLIKSGDLHYIYSE-KDYREMAFVFSLSMLRAFAADPVQEKLVQPL 119 Query: 109 LPYCFVASQVYRTNNAFLTYVET-----------------VISSLNFRETGLEELVEMVT 151 + N ++ + S + Sbjct: 120 AEGSLSLPGLIYRQNPCFVILKREFLQIADAAGLPSGASNLRSQYRVSSLPQYMRAKASL 179 Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEK---MHDKEQFSESALENMVALSAKSQEYLTR 208 + V TV+K + + ++ + A + +++Y R Sbjct: 180 LNIFAAFSEQNLLAVSQMPADRRVDTVKKTLSYMQEHMTEKVTMQELAAQANMNEQYFCR 239 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 ++ G+ P+ +NE+RI +A + L+ T++SVT+IA E+G+++ F++TF+ + TP Sbjct: 240 FFKKIIGRPPITYLNEMRIRYACRLLKETDHSVTEIALESGFNNLGNFMRTFRLVCGCTP 299 Query: 269 KSYRK 273 YRK Sbjct: 300 LQYRK 304 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 111/293 (37%), Gaps = 24/293 (8%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYN---KTESISGLHQHDYYEFTLVLTGRYFQEINGK 62 ++ +EQ + +YN + + H HD EF +L G I+ K Sbjct: 1 MDNKSYLQLKEQVNHGNMQLPLEVYNVEFRNSADFYSHWHDEMEFIYILNGSAEICIDFK 60 Query: 63 RVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 + GDF+ IP GS H E + + + E + L FV + Sbjct: 61 IFSVTTGDFIIIPNGSIHYMIGKENSKISYVALVFNLSLIEGNTLDYSQINFVNPIMKNK 120 Query: 122 -------------NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL-------RHY 161 + + +I S N + G + ++ F + + + + Sbjct: 121 LFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSYGFQLEIKGSLFSIFSTIFKEGYISLNL 180 Query: 162 REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 E D + V K + +++ + ++ S+ + R + GKT Q Sbjct: 181 NSENYSDLIKVENLKEVIKYIQTNYKNPISIKELADIAQYSEYHFLRFFKAQTGKTCTQY 240 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 IN RI A L TN S+T+IA+E G+ S FIKTFKK S +P YRK Sbjct: 241 INYFRIQKATLLLFDTNLSITEIAYEVGFGDVSYFIKTFKKFLSISPTKYRKS 293 >UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B6C Length = 303 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 106/292 (36%), Gaps = 22/292 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEIN 60 IN + A E ++ ++I S H HD EF ++ G IN Sbjct: 8 INVDIMQDASEIVRYDETGIPLYIQTGELSRYPDRKALCHWHDDLEFIRIVHGEMNYYIN 67 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISKRFF-------EQHYLPLLPY- 111 GK ++L+ D + + H L + + F +++ LPLL Sbjct: 68 GKNLVLKEHDGIMVNTRQMHYGSSINQNDCSFLCILVHPALFSSNRLIYQKYLLPLLEDR 127 Query: 112 ---CFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQV-- 166 + L + + E G E + + + + L + Sbjct: 128 ETEFVYLDSGRPDHGFILDCLMEMTQLKEHGEYGYELEIIGLFYLIWRHLARQFKAGKTA 187 Query: 167 ---IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 I+D+ ++ + + + L + A + + ++Y ++P+ +N Sbjct: 188 APGIEDMDTKVQKDMVSFIYQHYTEKLTLSAIAASGGVCRSKCCQIFKKYLCQSPIDFLN 247 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 R+ + L+ T+ S+T+IA E G++ S + + F + TP+ +R + Sbjct: 248 SYRLEVSSHLLKKTDKSITEIATECGFNHLSYYSELFMRHYGCTPRQFRSQH 299 >UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QN46_9SPHI Length = 288 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 99/279 (35%), Gaps = 26/279 (9%) Query: 21 NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 + ++F + N LH H + TL+ G + K D + + H Sbjct: 12 DDRSFRIDQDNAPYFYGQLHFHPEIQLTLIQQGEGTLIVGDKIDRFNPYDVLLLGANLPH 71 Query: 81 -----QSFYEFGATRI---LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL------ 126 +Y+ +TR ++V E+ L L + + + + Sbjct: 72 VLRSDTDYYQPESTRRATSVSVLFKPEHLEKTMLNLPETRHLTTLLQEAQHGVRLRCGTE 131 Query: 127 TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE---------QVIDDVPQWLKST 177 + ++ + + + L V++ L E Q Q Sbjct: 132 NALTQLLEDIPEKRPFEQLL---GLLQVLDNLAANPEREVLSATAYAQPQRPDDQRRLEQ 188 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 V + S +L+++ ++ + R +++ KT Q++NE+RI A + L + Sbjct: 189 VFSYILQRYASPISLDDVANVANLTPGAFCRFFRQHTRKTFSQLLNEVRIEHACRYLRES 248 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +++ IA GY++ S F + FK++ P Y + Sbjct: 249 QENISQIALNCGYTNLSNFNRQFKEIVGMPPGEYIRSYR 287 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 94/283 (33%), Gaps = 24/283 (8%) Query: 14 AREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E+ + I + E+ LH H +EF +L+G I K ++ Sbjct: 7 LKEKATHGTALIPIAIRHLNYAEGLENFFYLHWHSEFEFVYILSGAILYSIEDKEYCVKA 66 Query: 69 GDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFF---------EQHYLPLLPYCFVASQV 118 G+ +FI H + G V F + P+L V Sbjct: 67 GEGLFIHSNQLHAARSFNGMPCEACVVLFHPNLFGHNKQSSTYSKFIYPILEGDLVFENY 126 Query: 119 YRTNNAFLTYVETVISSL----NFRETGLEELVEMVTFYVINRLRHYR-----EEQVIDD 169 ++ + V ++S L + E L++ F + + + + + Sbjct: 127 FKCEEEWQRLVMKLLSELDDLKYENVSENELLLKSKIFEIWHLCYKNSVALAPQGRKNRN 186 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V + E L + + S+ A + +P+ + RI Sbjct: 187 YKLERMQPVLNYIHENYKEEITLMALAKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQ 246 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + L T++ + DIA G+++ S F + F K +P YR Sbjct: 247 SCTLLTETDWKIADIARNVGFNNISYFNREFIKAIGCSPSKYR 289 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 107/297 (36%), Gaps = 28/297 (9%) Query: 12 ATAREQQLFNGKNFHVFIYNK-------TESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 RE + K V I+ E I LH H+++E ++ G I+ + Sbjct: 5 KELRENTRIDEKMHPVQIFQNRALQKKPGELILYLHWHEHFEIIVMQQGSAVFHIDSESY 64 Query: 65 LLERGDFVFIPLGSHHQSFYE-FGATRILNVGISKRFFEQHYLPLLPYCFVASQVY---- 119 GD +F+P G+ H + G L + + F+ L +V + Sbjct: 65 EAHPGDVLFVPAGALHVGYSLCEGDLSYLAIVYNSSLFQNWMQDSLHTKYVLPYLEGRVQ 124 Query: 120 ---------RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV 170 + + +E S ++ + +V+ ++ L + + Sbjct: 125 LPVKPTRLDPSCADYYYLLEQANSEFKAKQPAYQLMVKSQLHMLLTLLSRKFLPHQLPEQ 184 Query: 171 -------PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 + + + + + + + + + + ++ G+T + +N Sbjct: 185 ATNQYVHNREQFKALIEYIEANFADKQTVADAARRMNLNVHHFCKMFKKLTGRTFIDYVN 244 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 R+N A++ L + S+T+IA G + + F K +KK P RK+LT+ N+ Sbjct: 245 VCRVNEAERLLLAGDLSITEIAGCVGCDNSNYFTKMYKKYKGVAPSQLRKQLTDTNK 301 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 24/259 (9%) Query: 39 LHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +H H Y+E V G N +R++L +GD + + + H + I N+ + Sbjct: 71 MHNHGYFELVYVYHGSCVNLFPNQERIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVLK 130 Query: 98 KRFFEQHYLPLLPYC-----FVASQVYRTNN-------------AFLTYVETVISSLNFR 139 + FE+ L LL F + +YR N +E +I+ L + Sbjct: 131 PKLFEKSMLSLLSDNPLFSNFFVNYMYRVNKARDYMLFHTNGEKRIAQTMENIITELYSK 190 Query: 140 ETGLEELVEMVTFYVINRLRHYREEQV----IDDVPQWLKSTVEKMHDKEQFSESALENM 195 E E + L +EQ+ D+V + + D+ + L+++ Sbjct: 191 EMCYRRAAEAELIVLFTCLARIYKEQLGLKGFDEVKNKQVTDIITYMDENFSQ-ATLQSV 249 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S YL+R +++ K +II+ ++ A LE T+ + +IA G++ S Sbjct: 250 ADHFGYSTHYLSRMIKKHTNKNFSEIIHSFKLENACTYLETTDIPMREIAELVGFNDASY 309 Query: 256 FIKTFKKLTSFTPKSYRKK 274 F K FK+ +P YRK+ Sbjct: 310 FHKVFKQKYGQSPAEYRKQ 328 >UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYV7_CLOB8 Length = 303 Score = 202 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 97/293 (33%), Gaps = 24/293 (8%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEING 61 +E +F + IY + H H +F+ L + I Sbjct: 8 RIEVNDNLQETVKHGSHDFPLAIYTDKFNLFEDGYIRWHWHKEVQFSYSLYDKVVVFIED 67 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCFVASQVY- 119 + ++L G+ + I HQ + ++ L+ +++ + Sbjct: 68 EEIILSPGEGIMINSNVLHQIKPYKNIDCMMFSIDFDSTLIGGSEESLIEKKYLSPIIES 127 Query: 120 ------------RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ-- 165 L+++E V + + G E ++ V L +E Sbjct: 128 NNLKFISLKPDVPWQKRILSHLEQVFILSHEKSYGYELEMKNYLSIVWLNLIKEIKEDIK 187 Query: 166 ---VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + K L+++ + S+ R+ +R TP + + Sbjct: 188 ISMPSASNDDERVKMAMQYIQKHYADNIDLDSIARAANISKSECCRSFKRILKVTPFEYL 247 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 E R++ A + L S+++I+ + G++ S F K FKK + +P YR K Sbjct: 248 MEYRVSKAAELLLKNKDSISNISLDVGFNGISYFGKVFKKYRNCSPSEYRTKY 300 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 202 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 96/268 (35%), Gaps = 17/268 (6%) Query: 23 KNFHVF-IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 F +N S + H H+ E ++ G IN L +GD + I G H Sbjct: 12 SEFPFRLFFNDGYSNTPHHWHEDIEIIYLVEGTLKACINRDTYDLTQGDILIIGGGEIHC 71 Query: 82 SFYEFGATRILNVGISKRFFEQH---------YLPLLPYCFVASQVYRTNNAFLTYVETV 132 F E + + ++ P+ + + ++ + Sbjct: 72 FFKEKKFSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHALMERHINEI 131 Query: 133 ISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST-------VEKMHDKE 185 I+ + E G + +++ + + L Y +Q + V + D Sbjct: 132 INEYSKAEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMDSVFQYVDTN 191 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 L+++ S+ Y T+ + G T + +N RI A+ ++ + ++ +IA Sbjct: 192 YQERIDLDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDETIAEIA 251 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + G++S F + FK + TP YR+ Sbjct: 252 YNCGFNSIKTFNRLFKNIVGCTPMKYRR 279 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 202 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 93/290 (32%), Gaps = 14/290 (4%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 ++ A E + F K H H E V G ++I Sbjct: 3 MLKLKPAFEAIEPDFGQSFTYQKFDALKPNKNLVWHYHPEIELVYVNGGNGKRQIGSHVS 62 Query: 65 LLERGDFVFIPLGSHHQSFYE--FGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN 122 +GD + I H F + G T V + F + + + + Sbjct: 63 YYTQGDLILIGSNLPHCGFTDACTGNTSESVVQMKTDFLGSDFFSIPEMRNIRQLFEKAK 122 Query: 123 NAF------LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ------VIDDV 170 + I L ++ L + + Y+ Sbjct: 123 GGIAFTGSAKKKIGEKIEILEYKSDFQRLLAILNILNELGSTSEYQILNAEHLSVETQSK 182 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 +++ + +LE M L+ + R ++ KT +Q +NE R+ A Sbjct: 183 ENERINSIFNFVKENYREPISLEEMADLTHMTVPSFCRYFKKVTNKTFVQFVNEYRMVHA 242 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 L S+T+I FE+G+++ S F K+FK T +P YR +L + Sbjct: 243 SNLLSENEMSITEICFESGFNNFSHFNKSFKAFTGMSPSEYRNQLKSVMR 292 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 108/283 (38%), Gaps = 19/283 (6%) Query: 10 EIATAREQQLFNG-----KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 +E + +H I + LH HD ++F +L G IN + + Sbjct: 8 IDYNLKELTEHSTTTWSIALYHTKICDHRSGHIPLHWHDEFQFVFILEGEAEFHINEETI 67 Query: 65 LLERGDFVFIPLGSHHQSFYEFGA-TRILNVGISK------RFFEQHYLPLLP----YCF 113 L+ GD VFI G H + G L + +S F P + Sbjct: 68 CLKEGDGVFINCGCLHMAKDANGTTCTYLCLNVSPHFITANELFTTFVHPYMHASQTPYI 127 Query: 114 VASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV--- 170 + ++ N ++T+ ++ E + + + L + D Sbjct: 128 LLNRKDHWPNHIYQCIQTIQRLIDETPAYYELELNIQLITMWKCLLQNGFQIKYDARQHD 187 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + + + L+++ S+ R + KTP+ +NE R+ + Sbjct: 188 KNERMKPMLNWIHQHYHEKVLLQDIARAGQLSRSECCRYFKDILKKTPLHYVNEYRVQQS 247 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L+ T++++T+IA++ G++S S FI FK++ + TP +YRK Sbjct: 248 LILLQETDFNITEIAYKVGFNSTSYFISMFKRIKNTTPLAYRK 290 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 102/278 (36%), Gaps = 14/278 (5%) Query: 14 AREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E + +F + + + H H YE +L G + + G LL++ Sbjct: 6 YHECRQRGTVDFPIEYHYVDHTHPQYEMPFHWHIEYEIIRILDGEFRLFLEGTEYLLKKD 65 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGIS----KRFFEQHYLPLLPYCFVASQVYRTNNAF 125 D FI G H + + + + F +L + + ++ Sbjct: 66 DVAFIKDGKLHGGSPKDCTYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCI 125 Query: 126 LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM---- 181 + + T+ ++ E G E + L+ ++ + +E++ Sbjct: 126 TSPLITMFDAIRSEEEGYELSILGSLLLFFAALQKNEYYSKEEEYDLKSQKAIEQLKASL 185 Query: 182 --HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + L+ + S +Y R Q Y +TP+ +N RI A Q+ + Sbjct: 186 ELIVTDYAKPLTLQELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSED 245 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 ++TDIAF G++ S FIKTFKK TPK Y+ E Sbjct: 246 TLTDIAFRCGFNDFSYFIKTFKKYKGITPKKYQMMWKE 283 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 98/251 (39%), Gaps = 11/251 (4%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILN 93 ++ H H +YEF + +G IN +E GD +F+ G H++ Y + Sbjct: 15 HMAESHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPVNERVT 74 Query: 94 VGISKRFFEQHYL---PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLE----EL 146 + + + + N + VE +I + + ETG + + Sbjct: 75 ISFDGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEYEETGQDGFSPLM 134 Query: 147 VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE---KMHDKEQFSESALENMVALSAKSQ 203 + + ++ L +E + + + T+E K + LE + LS S Sbjct: 135 KKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLEEVAELSHMSP 194 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 Y +R + G + + IRI A + L + SVT+IA G+ + F F+K Sbjct: 195 AYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAFRKA 254 Query: 264 TSFTPKSYRKK 274 +P+++RK Sbjct: 255 KGVSPRAFRKM 265 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 105/286 (36%), Gaps = 22/286 (7%) Query: 10 EIATAREQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 T RE F + ++ + + + H H++ E ++G E Sbjct: 1 MDKTLREPMTMPDPQFPIKVHRCEFDGRGQVLFNHHWHEHLEILYFVSGEATLECGSTTF 60 Query: 65 LLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA 124 + GD + I H + + + H L F+ + + Sbjct: 61 TAKEGDMIVINRNELHYGLSQSDHLFYYALIADFSLLQSHSLDAPEMKFIT-PITQNRLI 119 Query: 125 FLTYVE---------TVISSLNFRETGLEELVEMVTFYVINRLRH-------YREEQVID 168 F + ++I L +E G E ++ + ++ L ++E V Sbjct: 120 FENRISGADALAPMLSIIKELERQEFGYELAIKSELYRLLTLLLRGYVATVLTQDEYVER 179 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + + K ++ + ++E + ++ S+ + +R + G+T + +NE R+N Sbjct: 180 MKNVERFAPIFKYIEEHYREDLSVEQLSGMAGLSRFHFSRLFKEISGRTVTEYVNETRLN 239 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A L + +V++IA G++ F +TFKK P + RKK Sbjct: 240 RADYLLRESPLTVSEIAAATGFNDIYYFSRTFKKYKRMAPSALRKK 285 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 94/291 (32%), Gaps = 23/291 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEING 61 +N + +E + +F Y + LH H+ E + G ++ Sbjct: 1 MNITDYGPLKETKSHFDSDFLYNTYPCSIPLDFTEVPLHWHNEMELIYIKKGCMIVSVDL 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLLPYCFV------ 114 + ++ GD V + G H E + N+ + F Sbjct: 61 EYSVVNAGDIVVVMPGHIHSIIQNESDSCEYENILFNLDMLVSRQCDYDTVSFFNGIAGF 120 Query: 115 -------ASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ-- 165 S+ + + Y++ + + G + F L + Sbjct: 121 NGYCPPVISKTAPHYSDLIHYIDEADNICKYFPDGYRLKIRACLFNFFFELNAHFYTHTD 180 Query: 166 ---VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + D V +K ++E + SQ + + + G + + + Sbjct: 181 MPVHLSDDKMDKLKLVLNYIEKNFARAISIEEIAQWCHFSQSHFMKFFKNCTGTSFITYL 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 N+ R+ A + L+ T V +A + G+ + S F + FK+ +P+ +RK Sbjct: 241 NDYRLIIAARILKTTTQPVIIVASDCGFDNISYFNRKFKEKYGVSPREFRK 291 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 103/287 (35%), Gaps = 20/287 (6%) Query: 7 NAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEING 61 E + F +Y T H H E + G + EI Sbjct: 5 KILTDKNNEELAVHGNYEFPCAVYFSDVSKYTAGEIAWHWHKEIEIITIYKGTLYIEIEN 64 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISKRFF--------EQHYLPLLPYC 112 K+ L++G+ +FI H + RI++ K +Q Y+ L C Sbjct: 65 KKFTLKKGESLFINSEEMHFMRMDAREECRIISFVFDKVLICGEKGSKIDQKYIIPLINC 124 Query: 113 FVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE-----QVI 167 S + T ++ S G E ++ V ++ + +E Sbjct: 125 KELSALELTEEDSQKLIQGYFS-YADEILGYEIVIRNVLSEILLNIVRENQELLEKSNGS 183 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 ++ + + K + +L ++ + + R R G +P++ + + RI Sbjct: 184 NNTDRERMKYMLTFIHKNYSEDISLGDIAKEAFIGEREALRCFARTIGTSPIEYLQKYRI 243 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A + L + VT+I +AG++SPS F K F ++ TP+ YRK Sbjct: 244 YTAAELLRKSELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYRKN 290 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 96/289 (33%), Gaps = 24/289 (8%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTE----SISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 I E F + +Y+ + H H+ E+ G + G+ Sbjct: 1 MIPIYHENNTHGTAVFPLQVYSHHDKDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFT 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS--------- 116 L G+F FI G H+ G + + + + + + F+ Sbjct: 61 LHPGEFCFINSGELHEIKS-GGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFP 119 Query: 117 -----QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRH-----YREEQV 166 + L +++ +I + + +++ ++ Sbjct: 120 TLPSVFSPEESQMILFHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISS 179 Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 + Q V + + +L ++ + S Y ++ GK P+ INE R Sbjct: 180 KEKDSQNKLKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYR 239 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 I A + L + V+ +A G+ + S FI+ F++ + TP YR L Sbjct: 240 IQKACQILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYRSHL 288 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 101/248 (40%), Gaps = 4/248 (1%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 ++++ H HD++E +L G I G+ L DFV P H S+ E + Sbjct: 24 NDNMTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKR 83 Query: 92 LNVGISKRFFEQHYL--PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEM 149 + + S + L + N L+ + ++ ++ + + Sbjct: 84 IVLYFSPDLIANDTICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVPGKYHDAYICN 143 Query: 150 VTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 ++ + + + + +P+ + + ++ + + S +L Sbjct: 144 QLNGLLLNMLRL-DFEAVKSIPKTRSAKAVDYIHNHYMEDISVNQLAEILYVSPYHLCHE 202 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 + GKT +Q +N RI A++ + T+Y++T I+ E G+S+ + F +TFKK+T P+ Sbjct: 203 FKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVAPR 262 Query: 270 SYRKKLTE 277 +K + Sbjct: 263 EKKKLYQK 270 >UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/XylS family) n=2 Tax=Bacillaceae RepID=B1HRT8_LYSSC Length = 294 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 113/293 (38%), Gaps = 18/293 (6%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRY 55 M P+ + +E L K F V +Y T ++ LH H +F + +G Sbjct: 1 MRLPLTHIKIAKDLQELTLHGSKEFPVALYETTMNMDSMDFLPLHWHKEIQFVYLKSGCA 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFV 114 + ++LE G+ +FI H++ ++ + + + H + +V Sbjct: 61 KYRVGANVLVLEEGEGLFINTSELHEAKPFQMEHAIVYCINVDPIIIGGHDGSIFMTNYV 120 Query: 115 ASQVYRTNNAFLTYVET-------VISSLNFRETGLEELV--EMVTFYVINRLRHYREEQ 165 + +L + + L +E + V E++ + + + E+ Sbjct: 121 QPYLTTHRQPYLKLTKELTQKVACMADILQKQEAFYQLKVWRELLYIWEVMLTQSLLTEE 180 Query: 166 VIDDV---PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 ++D Q + + LE++ S+ +R ++ G TP + Sbjct: 181 IVDPSIIVQQERAKAMLNFLHTHYQQKITLEDLAKHVYLSRAECSRYFKKVIGLTPFTYL 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + R+ + + L +VT IA G+S+ S +I+ FK+ T ++P YRKK Sbjct: 241 LQYRLRKSIELLRDDEQNVTIIAANTGFSTVSYYIEKFKEYTGYSPHVYRKKF 293 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 97/276 (35%), Gaps = 12/276 (4%) Query: 13 TAREQQLFNGKNFHVFIY----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 R + + + ++ H H E LVL G IN ++ L+ Sbjct: 2 DFRYETVIPNDDLPFRMFIFEGRDGNYRVSKHWHQSVELFLVLEGTLDFFINSRQYTLKP 61 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY 128 DFV + H + + I + FE + F A + + Sbjct: 62 NDFVIVNPNEIHSIECPD-PNITIVLQIPMKSFEGYMSDESRITF-ADKDESQKARLVAL 119 Query: 129 VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLK------STVEKMH 182 V + + E G V+ + + + ID V K S V + Sbjct: 120 VTAMYRTYEKGEFGYRLKVKSQFMEFLYLIVTEFRIEQIDKVRVQQKRHLDKLSQVTQYM 179 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + E +LE + + + YL+ + Y + ++R+ +A ++L ++ V Sbjct: 180 KENYDKELSLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVG 239 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 DIA + G++ F K FKK P YRK++ + Sbjct: 240 DIALDHGFADARAFAKAFKKRYGCLPSQYRKQMNQK 275 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 103/277 (37%), Gaps = 14/277 (5%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 +++ + F+ + + H H+ E VL+G E + L++G Sbjct: 6 PKLQKEPYYPVVKFY-YYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEGSYQLKKGQI 64 Query: 72 VFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA------------SQVY 119 +F+ G+ H+ R+ NV S + P C + Sbjct: 65 IFLDAGTRHRLIV-SERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLL 123 Query: 120 RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE 179 + + +I ++ + + +V+++ + R+ E +V + Q Sbjct: 124 HDTDDTYQCLRRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKRAL 183 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + E ++ ++ YL R + + GK+ + + RIN AK L+ T+ Sbjct: 184 AYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDI 243 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 S+TDI G +S F TFKK TP YRK+ Sbjct: 244 SITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 96/274 (35%), Gaps = 15/274 (5%) Query: 18 QLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 Q +F +F Y E + H H YE T++L + + E GD V + Sbjct: 9 QPLPESSFRIFGYEVKEFDAPWHYHPEYELTVILQSEGIRYVGNSMESFEAGDLVLLGPN 68 Query: 78 SHHQSFYEF---GATRILNVGISKRFFEQHYLPLLPYCFVASQVY------RTNNAFLTY 128 H G + V F +L + + + + R N Sbjct: 69 LPHCWKNTPDSVGPASSIVVQWPAEFMGSGWLNVEEFKSIRRLLQLATQGVRFNQEVSAR 128 Query: 129 VETVISSLNFRETGLEELVEMVTFYVI------NRLRHYREEQVIDDVPQWLKSTVEKMH 182 V +++++ + + + ++ + L ++ +TV Sbjct: 129 VLPMLAAMLDMQPFPRLMKFLEILELLATVKSIHLLCEQGFTHPLNYEDNQRINTVYNYI 188 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + L + L S+E +R R K +NE RIN A K L T+ V Sbjct: 189 REHYAERITLATLAGLVHMSEESFSRFFSRTMQKPLFTFLNEYRINMASKMLIETDMQVA 248 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +I+F GY SP F + F+K TP +YR + Sbjct: 249 EISFACGYESPPFFFRQFRKFGGITPAAYRNQFR 282 >UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 Tax=Clostridiales RepID=C4ZF37_EUBR3 Length = 291 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 95/289 (32%), Gaps = 21/289 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIY----NKTESISGLHQHDYYEFTLVLTGRYFQEING 61 +N E E + F Y S LH HD E + G ++ Sbjct: 1 MNILEYENYHEDKTHVELTFPYNTYLCSIPLDFSGVPLHWHDDMELIYIKKGCGHISVDF 60 Query: 62 KRVLLERGDFVFIPLGSHHQS-FYEFGATRILNVGISKRFF---------EQHYLPLLPY 111 K + V I G H Y + N+ S E PLL Sbjct: 61 KEYHVTAPSLVLILPGQLHSIDQYMDESMEYENIIFSLSMLLPGKYDYTKEDFLTPLLAG 120 Query: 112 CF----VASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL---RHYREE 164 F V + VY + ++ G + ++ + L + Sbjct: 121 RFTVPTVFTPVYPYYEDVVAPIDACDEICKTMPQGYQLYIKSKLYEFFFVLDNRCRNLTK 180 Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + V K + + ++ ++ ++ S+ + R + G + + + + Sbjct: 181 PLKSKKTLDKMKVVLKYVENNYADKISIADIADVAGFSESHFMRYFKETMGTSFVDYLKD 240 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 R+ A + L+ ++ SV I+ E G+ S S F + FKK TP YRK Sbjct: 241 YRLTMAARLLQSSDSSVLSISGEVGFESLSYFNRAFKKHYGMTPLQYRK 289 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 57/311 (18%), Positives = 110/311 (35%), Gaps = 36/311 (11%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNK----TESISGLHQHDYYEFTLVLTGRYFQEING 61 + + +T +E ++ ++F Y ++ H H+ E G + E+N Sbjct: 1 MQNQQPSTLKEIRVHGTQDFPCAFYQTGTRIKGNMVKHHWHEEVELLYFSGGEFCLEVNM 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYL----------PLLP 110 +R + F FI G H E + N V Y P+ Sbjct: 61 ERFNISEECFYFINPGELHSISVEKNGGCVENAVVFHMDMLNSAYALDQIQTNLIQPVQN 120 Query: 111 YCFVASQVYRTNNAFLTYVETVISSLNF-------RETGL-----------EELVEMVTF 152 + R N V + RE + ++ Sbjct: 121 GSIQFPRCLRKNEPAFEPVRKSYEEIRNVFGGDSFRENYYDGEAVTDDITRQLFIKSALL 180 Query: 153 YVINRLRHYREEQVIDDVPQWLKSTV---EKMHDKEQFSESALENMVALSAKSQEYLTRA 209 ++ L +V + T+ + + + ++ L +++Y R Sbjct: 181 RILAVLSANNLFEVTEKNHDHRIETIKTTLTYIQENYKEKIYIRDLAGLIGMNEQYFCRF 240 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 ++ G++PM+ +NE RI A L+ ++ +VT+I E GY++ F++ F+K TS TP Sbjct: 241 FKKVIGRSPMEYVNEYRIKRAIHYLKESDLTVTEICLECGYNNLGNFLREFRKYTSTTPL 300 Query: 270 SYRKKLTEFNQ 280 YR+ + Q Sbjct: 301 QYRRHSLKETQ 311 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 103/247 (41%), Gaps = 4/247 (1%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 +++S H HDY+E + G F I + + G+F+ H S+ + + Sbjct: 17 NDNMSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKR 76 Query: 92 LNVGISKRFFE--QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEM 149 L V SK + Q L V R ++ ++ + + E+ + Sbjct: 77 LLVYFSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYIHT 136 Query: 150 VTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 + + + + V + + + +H + + +++ + +S S YL R Sbjct: 137 LLNMALLTIARNIQTPVKPEKRNRITDVISYIH-QNYQEDISIDQLAQMSYVSPYYLCRE 195 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 +RY T +Q +N R+ A++ TN ++T+I+ + G+S+ + F + FK + TP Sbjct: 196 FKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMTPS 255 Query: 270 SYRKKLT 276 ++RK Sbjct: 256 NFRKMYK 262 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 101/269 (37%), Gaps = 16/269 (5%) Query: 22 GKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 K+F + ++ + G H H + E + +G I+ +GD V +P G Sbjct: 6 SKDFDIKRIKRSNTSCSTGVGAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSG 65 Query: 78 SHHQSFYEFGAT-RILNVGISKRFFE----QHYLPLLPYCF---VASQVYRTNNAFLTYV 129 H++ Y + + E Q L+ C V + + + + + Sbjct: 66 CLHRTTYNGKGMHERIVISFRNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALL 125 Query: 130 ETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVI----DDVPQWLKSTVEKMHDKE 185 + +I + + +++ ++ + + + DV + V + Sbjct: 126 DKLIFENDSPDELSPAFIKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEH 185 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 +LE + S+ YL++ + G + I +RI A L TN S+TDIA Sbjct: 186 YADNLSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIA 245 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 FE G++ + F F+K +P YRK Sbjct: 246 FECGFNDSNYFGDAFRKAKGISPHKYRKN 274 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 105/267 (39%), Gaps = 13/267 (4%) Query: 23 KNFHVFIYNKTESIS--GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 + + ++ S H H YYE +L+G+ I+ L+ GD V IP H Sbjct: 19 NSIQISRIRRSSSYVMKRPHYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIH 78 Query: 81 QSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCF---VASQVYRTNNAFLTYVETVISSL 136 ++ YE G ++ +K + + F + +E ++S L Sbjct: 79 RALYEEGLQAERYDMYFTKEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHL 138 Query: 137 NFRETGLEELV----EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK---MHDKEQFSE 189 + + + + F ++ + ++ Q D ++ + K + + Sbjct: 139 SHENGQEDAYSHVQQQSLLFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREH 198 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 L+ M A+S S Y +R + G + +N IR+ A L T+ +VT IA G Sbjct: 199 LTLDAMAAMSNMSPTYFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACG 258 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +S + F FKKLT +P+ YR + Sbjct: 259 FSDGNYFGDVFKKLTGLSPREYRNGIR 285 >UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZJ5_9BACL Length = 310 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 94/268 (35%), Gaps = 10/268 (3%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 Q + IY T H H EF VL+G +N + LL +GD V Sbjct: 40 FYQNWKLDPELPMDIYQSTNITFYPHFHAEIEFIYVLSGTIRIGVNEEIRLLRQGDMVIC 99 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAF---LTYVET 131 H + I+ + + + F + + T ++ Sbjct: 100 GSNDIHYFDSRELESEIIILICKPEWITMTKSWPSDFRFASPYIPAGTPGLETVKTILDE 159 Query: 132 VISSLNFRETGLEELVEMVTFYVINRLRHY-------REEQVIDDVPQWLKSTVEKMHDK 184 +I + ++ G L++ + L+ R + + + + + Sbjct: 160 LIREKDEKKPGYPLLLKAGILKLCGSLQRAVDTLPMDRTTKEKYESRRARMQQILSYIED 219 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 E ++ M + + +R+ + G +N +R+ A+ QL ++ S+ +I Sbjct: 220 HYREELNVKVMAKRFSMEPSHFSRSFKAAIGMNFKTYLNTVRVLSAEHQLLTSDLSIMEI 279 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A E G+SS F + FK+L P S R Sbjct: 280 ALECGFSSIRTFNRVFKELRGTVPSSLR 307 >UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDH7_9CLOT Length = 331 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 118/297 (39%), Gaps = 26/297 (8%) Query: 1 MMQPVINAPEIATAREQQLFNGK-----NFHVFIYNKTESISGLHQHDYYEFTLVLTGRY 55 M++ + T Q K + H K S LH HDY+E V +G Sbjct: 29 MLKKLARKNGFYTVPIQFYLTKKEQVAVDLHGLPNAKNAEQSLLHNHDYFELMYVRSGSC 88 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA 115 F +++ L +GD + + + H F + N+ +S+ FEQ LPLL + Sbjct: 89 FNVFESEKITLHQGDILLLNPNAKHDPFTTSEGDCLFNIMLSRELFEQSMLPLLSDNHLI 148 Query: 116 SQVY------------------RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINR 157 S + R A ++E +I +E G +++E + R Sbjct: 149 SNFFVDYMYHINKTQDYLYFPSRNTKAISPFLEEIILEYINKEQGYVQVIESALVILFAR 208 Query: 158 LRHY--REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 L +E + V L V ++ ++ L ++ A S YL++ +++ G Sbjct: 209 LGRIFAQENHIESSVSNKLIVDVIVYLNQH-SADVTLSSLAAEFGYSSGYLSKLIRKHTG 267 Query: 216 KTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 ++ I++ ++ AK LE T +S +IA G+ S ++F+ TP S R Sbjct: 268 QSFTDILSNFKLEKAKHLLETTAHSTDEIAQLTGFHDASYLSRSFRSKYGVTPSSCR 324 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 97/260 (37%), Gaps = 8/260 (3%) Query: 20 FNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 F + + Y + S H H + E V++G+ I V + D + I Sbjct: 18 FKLRYISISKYE-GDWQSHPHTHQFSELFYVISGKGVFYIENDTVSVCADDLIIINPHIE 76 Query: 80 HQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR---TNNAFLTYVETVISSL 136 H + ++ Y F+ + + +I Sbjct: 77 HTEKTMSNDPMTY-IVFGVEGLAFYFNSQNAANPKGYSYYNYGSAKTHFINFSQIMIKEF 135 Query: 137 NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV---EKMHDKEQFSESALE 193 N R+ G E + + ++ + + VI D + +K D L+ Sbjct: 136 NARKPGFEAICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAKKYIDANYAKNITLD 195 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + ++ ++ YL+ + Y G +P+ + E R+ +K+ L ++ S+ ++A G+SS Sbjct: 196 LLAEITHINKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQ 255 Query: 254 SLFIKTFKKLTSFTPKSYRK 273 S F + F+K T +P YRK Sbjct: 256 SYFSQIFRKNTGMSPLQYRK 275 >UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BDP1_9FIRM Length = 321 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 101/311 (32%), Gaps = 43/311 (13%) Query: 6 INAPEIATAREQQLFNGKNFHV-----FIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 I +E + F V I + + H H E T ++G+ +N Sbjct: 4 IQILTEKNKKEVKEHGSYTFPVQVSPEAIQSYEQHSFMWHWHPEIELTWFVSGQMEYVVN 63 Query: 61 GKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFV----- 114 +R ++ G+ +F + H + + ++V +F + +L +V Sbjct: 64 DQRYIISEGEGIFCNSNALHAGYMIDDQDCNYISVTFHPKFIYGYENSILQTKYVDFITS 123 Query: 115 --------ASQVYRTNNAFLTYVETVISSLNF-------------------RETGLEELV 147 N + Y++ + + E + Sbjct: 124 NEFWSSLVLKPEIPWQNEIIEYIKEIYTLTCQVQSSSDAFIPGYEGIAEQPELPDYEFRI 183 Query: 148 EMVTFYVINRLRHYR----EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 ++ + +RL + ++ + + E +LE++ A + + Sbjct: 184 HLLLCEIWHRLYLHYVQIAQDTPHPQKHLQRLKDILSYLQEHASEELSLEDIAAHAGLCK 243 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 R ++Y T + RI + L ++T IA G+SSP+ + + FK+ Sbjct: 244 SECCRFFKKYMRMTIFDYLLSTRIQNSIPLLMDGE-NITTIAGLVGFSSPAYYGQIFKRY 302 Query: 264 TSFTPKSYRKK 274 +P Y+K Sbjct: 303 IGMSPSQYKKN 313 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 105/278 (37%), Gaps = 14/278 (5%) Query: 14 AREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 + + + + + I+ + H HD E VL G+ I+ LE+G+ Sbjct: 1 MKYEIINYDEKLPIKIFVAKLNNYPPHWHDEIEIVKVLEGKIKVSISESVCFLEKGEMAI 60 Query: 74 IPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQV-------YRTNNAFL 126 I HQ + + + I+ +F E H+ L F + + + Sbjct: 61 IKHKEIHQIQSLENESLLQIIQINYKFMETHFPHLSRISFENNLLNISKDINLNVASNLK 120 Query: 127 TYVETVISSLNFRETGLEELVEMVTFYVINRLRHY-------REEQVIDDVPQWLKSTVE 179 + +I+ L+ R G E V + V + +E +++ + Sbjct: 121 QLINEMINYLSVRNQGYEFHVISAIYKVFGSIISNVPYTISTEDELEKNNITFNRMKKII 180 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + ++ +E + + + ++ Y+ +++ G + Q I +R+N A + L Sbjct: 181 EYIEQNYMNEININTLAEILHLNKYYIAHFFKKHTGLSLGQYITNLRMNKATELLIKNED 240 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 S+T+I G+ + F K F+++ +P Y+ E Sbjct: 241 SITNIILSCGFKNIKYFYKVFREVYKCSPLEYKNNRQE 278 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 108/273 (39%), Gaps = 15/273 (5%) Query: 20 FNGKNFHVFIYNKTESISGL--HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 + ++FH + L H HD YE +L+G I + ++ G V I Sbjct: 10 YPDRSFHFSAREVFGHYTMLSNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQ 69 Query: 78 SHHQSFYEFGATRILNVG-ISKRFFEQH-------YLPLLPYCFVASQVYRTNNAFLTYV 129 H++ + + SK + + +V + + Sbjct: 70 DVHRTTDADTQDHVRVLLNFSKDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLL 129 Query: 130 ETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID-----DVPQWLKSTVEKMHDK 184 + +I + + TG + ++ + ++ Y E D S + + + Sbjct: 130 DKMIHEIEHQSTGFQVALQALLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINT 189 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 + L ++ SQ YL+R ++ G T ++ IN IRI A++ L TN+ V DI Sbjct: 190 NYQTPLTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDI 249 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + G+ S S F + FK++T F+P +YR+ TE Sbjct: 250 SEAVGFGSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE80_9FIRM Length = 323 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 89/289 (30%), Gaps = 24/289 (8%) Query: 13 TAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 E F + +Y H H EF VL G + ++ Sbjct: 11 NLEEITCHGSPAFPMEVYLDNLDLYPNRFIPWHWHKELEFVYVLEGTIEFQTGVSTYVIG 70 Query: 68 RGDFVFIPLGSHH----------QSFYEFGATRILNVGISKRFFEQHYLPLL----PYCF 113 G +P H + A L G+S E+ Y+ L F Sbjct: 71 SGQGGLVPSNMLHMVSPYHRQHGSIYCAVLADSYLLHGLSGGLIEEQYISALFRPETDFF 130 Query: 114 VASQVYRTNNAFLTYVETVISSLNFRETGL----EELVEMVTFYVINRLRHYREE-QVID 168 + L + + R G + LV+ + L +E + Sbjct: 131 FLDGTSPWHAGVLACIHEMYQCDCSRPRGYLWKLQILVQQAGLILFENLDMKQEPCPSVH 190 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 D + KE LE++ + S R + ++P+ + R+ Sbjct: 191 DSRYQRVRCCLEYIHKEYAGRLRLEDIARAANVSVSECCRDFKEVLSQSPVDYLISYRVR 250 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + L ++ SV +IA G+S S F TF + TP YRK L E Sbjct: 251 MGEYMLAHSDKSVLEIALAVGFSGSSHFSNTFCRYMGCTPLYYRKHLME 299 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 112/292 (38%), Gaps = 23/292 (7%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 P AR Q ++ + H HDY+E V +G F G+ + L Sbjct: 54 VPFKGIARSQDQDIAILYYGLPLGQPPKQYVWHNHDYFEIIYVHSGSCFNRFQGETIKLC 113 Query: 68 RGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVYR-- 120 +GD + + HQ + I N+ +SK FE LL F + Y+ Sbjct: 114 KGDILLLNPTILHQIYALHEEDHIFNIMLSKSLFEGSMWQLLSGNKIINNFFVNYFYQMN 173 Query: 121 -----------TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDD 169 N+ + ++I+ ++ ++++ + L EQ + Sbjct: 174 KTKDYVHFRCSQNHLIEETITSLIAEYLGKKPAYYQVIQSYLIILFAYLSRIYSEQHFIE 233 Query: 170 VPQW----LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 + + + S L + + S Y +R + + GKT +I+++ Sbjct: 234 QQDLEKIGILPDIISFIAQNYQS-VTLTEIQNVFNYSSGYTSRLIKHHTGKTFSEIVHDF 292 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 ++N AK+ L TN ++TDIA + G++ K FKK TP YR+ + + Sbjct: 293 KLNHAKELLVSTNLNITDIAEKIGFNDSHYLNKVFKKRFGITPTQYRRGMKK 344 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 106/256 (41%), Gaps = 5/256 (1%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 ++ S LH H + E V+ G+ I +R ++ DFV I H + Sbjct: 27 KYDSDWHSTLHTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHTEVSSPDSP 86 Query: 90 -RILNVGISKRFFEQHYL-PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV 147 + VGI F + F + L Y+ ++ + + + Sbjct: 87 LEYIVVGIQGLSFSNLTPVDQGGHPFSFFNLRDEQKDILRYLNAMVQEATNQALSYDLVC 146 Query: 148 EMVTFYVINRLRHYRE---EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 + ++ ++ ++ E + ++ LE + +++ S+ Sbjct: 147 HNLLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQLEALASMTHLSRF 206 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y++ + ++ G +PM+ + IRI +K L TNYS++ +A G+++P+ F K F+K+T Sbjct: 207 YISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTPTYFSKQFRKIT 266 Query: 265 SFTPKSYRKKLTEFNQ 280 +P YR+K + +Q Sbjct: 267 GISPTDYREKYQKESQ 282 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 19/269 (7%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF 86 + ++ T ++H+ +E + G+ EI G + D + I H+ + Sbjct: 30 IERFHDTSWHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKFIVKS 89 Query: 87 GA-TRILNVGISK-RFFEQHYLPLLPYCF-----------VASQVYRTNNAFLTYVETVI 133 + + + F+ Y + F + N + + ++ Sbjct: 90 ESGCEFIVLSFKFVNRFDGQYSDVSLENFLDFVSGKETGPFITLKVSQKNDIIVLLNRIL 149 Query: 134 SSLNFRETGLEELVEMVTFYVINRLRHYRE---EQVIDDVPQWLKSTVE---KMHDKEQF 187 + G E L ++ + + + E I + +K ++ + Sbjct: 150 KERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYE 209 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + +L+++ S Y TRA + G +P+ + +IR+ AK+ L+ T+ ++DIA Sbjct: 210 RDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALS 269 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G+S+ F FKK TP YRK + Sbjct: 270 VGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 98/251 (39%), Gaps = 16/251 (6%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGI 96 H H++ + + G+ F N K + +GD + I H R + I Sbjct: 33 FKEHWHEHLQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYLESLNNDLRFYLIRI 92 Query: 97 SKRFF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV 147 F ++ PL + + R ++ + ++T+I N +E G E V Sbjct: 93 DLPFLFSDQVDLCQTKYLSPLSENLILFKNLIRNDDEIVRCIKTIIKEYNKKEIGYELAV 152 Query: 148 EMVTFYVINRLRHYREEQVIDDV-------PQWLKSTVEKMHDKEQFSESALENMVALSA 200 + + ++ L ++ + V + + + N+ ++ Sbjct: 153 KANLYNLVVLLIRNYIDKFVTKRQLAFKINNDERFYKVFEFVHSNFNKKISTLNLSNIAH 212 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 S Y R ++ GKT + INE+R+ + + L+ +N ++T++A G++ + F + F Sbjct: 213 VSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVNYFSRLF 272 Query: 261 KKLTSFTPKSY 271 KK +P + Sbjct: 273 KKKYGVSPTKF 283 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 105/253 (41%), Gaps = 7/253 (2%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFG 87 + + + S H H + E V++G + ++ GD V IP H + Sbjct: 26 VKDDKDWNSVFHTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYLEHTEQSVKGK 85 Query: 88 ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV 147 + +GI K F F +R ++ ++ + + G E + Sbjct: 86 SLEYYVIGIDKISFLAENGQTGIQAFCN---FRDQSSVSDIFAQMLYEMRNDDYGSEIIC 142 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVALSAKSQE 204 + + +I R+ + I + + +++ D L+ + +L+ ++ Sbjct: 143 QNLLEILILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERITLDTLTSLTHMNKY 202 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y+ + +Y G +P+Q +N R+ A L T++SV+DIA G+SS S F ++F+K Sbjct: 203 YMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFRKYY 262 Query: 265 SFTPKSYRKKLTE 277 TP YR++ E Sbjct: 263 GMTPLQYRQQNAE 275 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 100/282 (35%), Gaps = 20/282 (7%) Query: 12 ATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 +E + F +Y T H H E + G + EI K+ +L Sbjct: 4 ENNKELAVHGNYEFPCAVYFSYVSKYTAGEIDWHWHKEIEIINIYQGTLYVEIENKKFIL 63 Query: 67 ERGDFVFIPLGSHHQSFYE-FGATRILNVGISKRFF--------EQHYLPLLPYCFVASQ 117 +GD +FI H I++ +K EQ Y+ L C S Sbjct: 64 SKGDSLFINSEEMHFMKMNTKEECVIISFVFNKSLICGDKGNNIEQKYIDPLINCKELSA 123 Query: 118 VYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE-----QVIDDVPQ 172 + T + S + G E +V + ++ + ++ + + Sbjct: 124 LELTKED-SKKLAQAYYSYSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSSNNSNTDK 182 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 + K + +L ++ + + R R G +P++ + + RI A + Sbjct: 183 ERIKRMLAFIYKNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKYRIYTAAE 242 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L + + +I + G++SPS F K F ++ TP+ YRK Sbjct: 243 MLRNSEQPIAEICLQTGFNSPSYFSKVFCRMLGTTPREYRKN 284 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 90/261 (34%), Gaps = 20/261 (7%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-------QSFYEFGAT 89 LH H+ YE +V G + I GD I H + Sbjct: 26 YPLHCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCDSLTGKNGSEES 85 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL----TYVETVISSLNFRETGLEE 145 + S F + + Y +A+ + ++ + + + G Sbjct: 86 ACEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRKQVQRLDKGQGI 145 Query: 146 LVEMVTFYVINRLRHYREEQVIDDVP---------QWLKSTVEKMHDKEQFSESALENMV 196 +++ L +E +I P Q TV + + L+ + Sbjct: 146 GRIRWLLALLDTLARSQETSLIASGPVRNGTALRRQETVDTVCRYLREHFRENLCLQAIA 205 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 + + L R ++ GKT + IRI A + L T S++ IA+E G+++ S F Sbjct: 206 REACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLSISAIAWETGFANLSHF 265 Query: 257 IKTFKKLTSFTPKSYRKKLTE 277 + FK LT TP YRK + Sbjct: 266 NRQFKSLTGQTPGEYRKNIRS 286 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 100/279 (35%), Gaps = 15/279 (5%) Query: 14 AREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 + + + ++ H H+ YE +L+G IN E+G + Sbjct: 4 PKYFIAEHSFSIQYMQRKGFTEMNAPHVHEGYELYYLLSGERTYFINQSVYTAEKGTMII 63 Query: 74 IPLGSHHQSFYEF-GATRILNVGISKRFFE-------QHYLPLLPYCFVASQVYRTNNAF 125 I H++ + + S F E LP + R A Sbjct: 64 INPHDLHRTSSTEVQEFERILINFSHDFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAV 123 Query: 126 LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY------REEQVIDDVPQWLKSTVE 179 + + ++ G E++V + F ++ + + + + + + + S + Sbjct: 124 EHMLMEMKKECKLKKEGHEDVVRALLFQLLFTIYRSLAGGGRNQTRPLHPMDEKI-SEIA 182 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + L+ + S YL+R ++ G + I IRI AKK+L T+ Sbjct: 183 SYINCSFQETMTLDGLAGQFYISPSYLSRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDE 242 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 + DIA + G+ S F K FK++ P YRKK + Sbjct: 243 KILDIAADTGFKHISHFNKVFKEIVGIPPLQYRKKSRDI 281 >UniRef50_C0EDY4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDY4_9CLOT Length = 345 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 101/270 (37%), Gaps = 21/270 (7%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 H HD++E + V G + I G+++ V + + H+ F Sbjct: 69 PWRKEPARNPNPYPHNHDFFEMSYVYKGTFHNIIGGQQIDQPEDSLVLLSPQAKHRCFTR 128 Query: 86 FGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRT-----------NNAFLTYV 129 + N+ I + E+ ++ +L F +Y +NA + Sbjct: 129 SSEDLVFNILIKRELIEKIFVQMLSESESVCRFFLDSLYNVRQKQPYLFFSCDNALTELI 188 Query: 130 ETVISSLNFRETGLEELVEMVTFYVINRLRHYR----EEQVIDDVPQWLKSTVEKMHDKE 185 ++I ++ + +++ + ++L EE + L +E ++ Sbjct: 189 HSIIEEYFQQQDFYQSIIQAKLIELFSKLSRLHQKNAEETPAETSNFQLILQIEDYIERH 248 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 S L ++ + YL+R Q+ + + ++ +IR+ A + L ++ + + Sbjct: 249 Y-STVTLSSIAEHFNYTPSYLSRLIQKQFNQKFSCLVQDIRLKHACRYLAHSSLPIDQVV 307 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 GY+ S F + FK+ + +P YRK Sbjct: 308 EIVGYNDVSHFYRVFKQKHNVSPNQYRKSH 337 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 100/287 (34%), Gaps = 23/287 (8%) Query: 10 EIATAREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +E + Y+ K +H HD E V G+ I+G+ + Sbjct: 1 MYFELKENRPHGTPENPFSQYHISDVKRAFQIPVHWHDELEIIYVKQGKLHVTISGENYI 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCF----------VA 115 D + GS H G + L+ ++ Sbjct: 61 GSPKDAFVVSPGSLHLMGSPTGDADYYTFLFPLEYISFQTDDLMEKSILSPLKRGRLMIS 120 Query: 116 SQVYRTNNAFLTYVETVISSLNFRETGL--------EELVEMVTFYVINRLRHY-REEQV 166 Q+ T + + ++ + + ++ I ++ + Sbjct: 121 PQINDTAADICERLIEINEQISGKNAEKTDAANIEAQFETKITLIKFIRKMWRNGLILEN 180 Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 + + + + E +L+ A S++Y++R + ++ T Q +N +R Sbjct: 181 GTNGTNTTEKEMITYIRQNYTREISLKEFGAQFHLSEKYISRYFKEHFHITLSQYVNHLR 240 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + A++ LE + SVT++A +GY + S FI++FKK+ +P YR Sbjct: 241 LEHARQLLEESTASVTEVAMCSGYQNVSYFIRSFKKMYGVSPLKYRN 287 >UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUK1_9CLOT Length = 334 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 96/296 (32%), Gaps = 24/296 (8%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYF 56 M I E + F V + ++ S H H E TL+ G Sbjct: 32 MPSKIQIITNEHQEELKEHGTYEFPVLVSDEALSRFYTSSFQWHWHTEIELTLITEGTMV 91 Query: 57 QEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCF-- 113 +IN + G +F + H E G R +++ R + + + Sbjct: 92 YQINDQIFYPRAGQALFGNSNTMHTGRMENGRDCRYISITFHPRLLYGYQGSRIASRYTD 151 Query: 114 -----------VASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY- 161 + + +E +I + R E ++M F L + Sbjct: 152 PLMENAALPAVCFDLSQEWHGEAVGLLEDIIRIDSLRYDTYEMDIQMDLFRFWKLLYLHC 211 Query: 162 ----REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKT 217 Q + + S+ L+++ + R + Y ++ Sbjct: 212 RPDREPAHTAGRKNQERIRQMLSFIHENYQSDITLDDISRHIHICKSECCRVFKGYMKES 271 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + + + RI + + ++T+ A AG++ P+ F K F K+ +P+SYRK Sbjct: 272 LFEYLLKYRIEKSIPDVLEGKLTMTETAIRAGFTDPNYFSKVFHKIKGCSPRSYRK 327 >UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQZ7_9FIRM Length = 296 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 103/293 (35%), Gaps = 25/293 (8%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEIN 60 ++ REQ + +F V Y+ + +H H Y+E +G ++ Sbjct: 1 MSIVLDHQLREQIPPDILDFPVAFYSDELADLPDRAGPVHWHPYFEIATAQSGVLDYQVG 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFG--ATRILNVGISK--------RFFEQHYLPLLP 110 + LE GD +F+ H G + + S + ++ P+L Sbjct: 61 QTHIRLEPGDSIFVNQNMLHGIRQLSGAAPDPLPILVFSGTVVAPEHSAVYRKYIQPVLG 120 Query: 111 YCFVASQVYRTNNAF----LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE-- 164 + V+R ++ + ++ R E V+ V+ + + + Sbjct: 121 CSTLPFVVFRHDSDLWQAVRQQIHRACDAMRERPACYELTVQRSLCSVLEAIFRHLDSLP 180 Query: 165 ----QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + Q + + L ++ A + S+ R Q Y G +P++ Sbjct: 181 PLPSSRVQLTAQIRLQKMLSYLYEHYAQPVTLADIAAAAHISRSEAGRCFQAYLGCSPVE 240 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + + R+ A + L+ T+ + +I+ G+ S F + F+K P RK Sbjct: 241 ALIQYRLQRAWRMLQETDMTQQEISLACGFHSVQYFRRQFRKRYGCAPGEKRK 293 >UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8E9_PAESJ Length = 294 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 108/294 (36%), Gaps = 19/294 (6%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEIN 60 + + E+ +N KNF ++I T H H EF LVL G +N Sbjct: 1 MQLDVFSDLSERLNYNLKNFQLYIKKGTLMPFDKYAAACHWHPDLEFILVLDGYMNFFVN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFF-----------EQHYLPL 108 G+ VLLE+G +F+ H + + V I E+ + P Sbjct: 61 GETVLLEKGTGIFVSSKRLHYGYSPDKIDCSYIVVCIHPSLLGNEQWIGKEYWEEKFGPN 120 Query: 109 LPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID 168 V ++ + L + + ++ + L+ + N E++ Sbjct: 121 TEDFIVLTEHESWHKDALVSLNQLYEEMHATKRNPIRLLSIAMSLTANIGDRIGEKKEPT 180 Query: 169 DVPQ--WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 + + + + L+++ A + S+ +Y ++P + + R Sbjct: 181 AIDPSWFYVWKMTAFIHGHFEHKITLDDIAAAGSVSRSQCCILFGKYVEQSPNTYLMKYR 240 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 I + + L T+ S+++IA G+ S S + F+K P YR++ + +Q Sbjct: 241 IKKSCELLSETDRSISEIAISCGFQSSSYYTFVFRKELGIVPNEYRRQYRDAHQ 294 >UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9M5_9FIRM Length = 315 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 93/291 (31%), Gaps = 23/291 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVF-----IYNKTESISGLHQHDYYEFTLVLTGRYFQEI 59 + RE + F ++ + H H EF+++ G E Sbjct: 8 LRQIETDQNFRELNQTLDQRFPIWASSDSFFRYYNRYFRCHWHPEIEFSVITEGECIYEA 67 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNV--------------GISKRFFEQHY 105 + L++GD +FI H + + V I ++F E Sbjct: 68 GDRVYELKKGDGIFINQNVLHMAEMKGKLECRFGVVRAEAFFLGGSTESLIYRKFMEPVI 127 Query: 106 LPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ 165 C + + +I R G E ++ + E+ Sbjct: 128 NNPEISCVPFYGDIPWQKRLMRQLAELIRIYEERPEGFELMMTSGFSLLWLEFVKALGEE 187 Query: 166 VID----DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 + + + + L+++ + Q R + ++P++ Sbjct: 188 KGNAVSINKDAERIRKGISYIQRNYTKKITLKDIAEICQSCQSECCRMFRNVVKESPIEY 247 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 +N RI + +E YS+T+IA + G+S S F + FKK TP Y+ Sbjct: 248 VNTYRIRRSLILIEEGTYSMTEIAQKTGFSGSSYFTEVFKKKMGCTPSKYK 298 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 103/282 (36%), Gaps = 17/282 (6%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLH----QHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E + F Y H H YE +L+G + +I+ ++ GD Sbjct: 7 KEDMVHGSTKFPFAYYYVNSYHPRYHMITHWHKEYEIIRILSGTFNIKIDAVSYTVKTGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGIS-----KRFFEQHYLPLLPYCFVASQVYRTN-NA 124 +F+ G+ H L IS L+ Y ++ A Sbjct: 67 ILFLNSGAIHSGIPVDCTYECLVFDISSLLQQNSLVNTELNALIHYKKKIQLLFDKKLGA 126 Query: 125 FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR------EEQVIDDVPQWLKSTV 178 + + + ++ G + + +Y + + E I+ V Sbjct: 127 VYDILNQMFEIMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIKEKEFSAINKKSLSRIKKV 186 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + +LE+M +++Y + + KTPM+ +N RI A ++++ + Sbjct: 187 LFFIETKYMENISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFD 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLT-SFTPKSYRKKLTEFN 279 S+TD+A++ G++ S F K FKK TP+ Y K + Sbjct: 247 SSITDVAYDCGFNDTSYFTKVFKKYNSGMTPREYSKLYLKKE 288 >UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G478_ABIDE Length = 299 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 94/285 (32%), Gaps = 22/285 (7%) Query: 9 PEIATAREQQLFNGKNFHVFIYNK--TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 ++ RE + +F + ++ T+ H HD E ++ G +I +L Sbjct: 9 KTDSSGRELLTYGTSDFPIAFFDDDLTKVKVPWHWHDELEIIIITEGSVSVQIANSSFVL 68 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRF--------FEQHYLPLLP----YCFV 114 +G+ F+ G H + + S ++ + P+ Sbjct: 69 NKGEGYFLNSGILHSAKLLSPKGHQRALIFSPEIAAHNEDIVWKTYIKPIFKKQALPFIK 128 Query: 115 ASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY-------REEQVI 167 S N+ L V + + +T V V + ++ E Sbjct: 129 LSPGISWQNSILRLSNDVWLTGAYEKTDYPITVRHNLTKVFSLIKSNIDLIENETEFTHK 188 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + + + + + ++ S R ++ TP+Q + + R+ Sbjct: 189 TKQDELRIKKILFFIENNYSTTITIADIAKSGDISISSCLRLFKQILKTTPIQYLIKYRL 248 Query: 228 NFAKKQLEMTN-YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 A ++ + S+ DIA+ G+S + F + FKK TP Y Sbjct: 249 QKAVEEFDSLEGRSIGDIAYSCGFSDATYFNRCFKKEFGCTPTEY 293 >UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP2_9CLOT Length = 327 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 113/295 (38%), Gaps = 20/295 (6%) Query: 3 QPVINAPEIATAREQQLFNGKNFHVFI--YNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 +++A +I E+ N + + H+H ++EF V +G++ ++ Sbjct: 32 PWIVSADDIFAPHEEVAINVHHLPSWYGAPQPNTHPMKPHKHIFFEFVYVYSGQFHSVVD 91 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-----YCFVA 115 + ++L + + + H + E + +LN+ I + ++ + L+ + F Sbjct: 92 SESLVLGQDQVILLNPNQVHAPYIERDSDLVLNILIKQPLIDRTFASLISRDNILFDFFY 151 Query: 116 SQVYRTN-----------NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE 164 + +Y + + +++ R E+ + + L E Sbjct: 152 NYIYGISGASNYLMVDRTPRVDQIISSIVEEYCERRPLFEQSLIGWIINLFTELARVYSE 211 Query: 165 QVIDDVPQWLKSTVEKMH--DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + + + K + ++ +E ++ L + S YL+ ++ G+T +I+ Sbjct: 212 RKTNQPARPAKPGMAEIIGFIRENYATVTLSETAKTFSYSPSYLSYLIKKETGQTFKEIV 271 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + RI A L+ T ++ I+ G+ K FK+ +P YRK+ + Sbjct: 272 RDFRIESACNFLKNTQLTLEQISEILGFQDSFYIAKVFKQRYGISPSEYRKRSRQ 326 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 109/294 (37%), Gaps = 32/294 (10%) Query: 14 AREQQLFNGKNFHVFIYNK------TESISG-----LHQHDYYEFTLVLTGRYFQEINGK 62 A+ F F V + ES H HD+ E +V GR + G+ Sbjct: 5 AKGVDYFGADGFPVTVRRVATQADGGESHPHDVTEIEHWHDFCELAMVTGGRGVHVLEGE 64 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLL-----PYCFVASQ 117 + GD + H F E ++NV L F+ Sbjct: 65 SFHVSTGDVFVLQGRQVHC-FRERQGLALINVMYDPERLPLPLGLLRRLPGYSALFMLEP 123 Query: 118 VYRTNNAFLT--------------YVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE 163 +R+ + F + VE + + + G E ++ + ++ L + Sbjct: 124 TFRSTHRFSSRLRLARRELGSAEAIVERIENESKAAQEGHEAVLLSLLVELMVLLSRHYA 183 Query: 164 EQVIDDVPQWLKS-TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + + L+ + M ++ LE + + S+ L R ++ G++P+ + Sbjct: 184 QSDTRESHALLQVGQLVSMLEQRFGEPWTLEQLAEQARVSRSNLLRMFRQATGQSPIDFL 243 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +RI A++ L ++ +T+IA E G+S + F + F+K TP YR+++ Sbjct: 244 IGLRIEAARRLLRRSDLGMTEIALECGFSDGNFFPRQFRKTCGVTPSIYRRQMR 297 >UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales RepID=A6LH31_PARD8 Length = 293 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 99/288 (34%), Gaps = 20/288 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + H ++ + I H H E + +G + + G Sbjct: 1 MKPLFQELPFPIDSHIHFYVEDLPHFIVPWHYHPAIEIMYITSGTGTRFVGDHVEGYFEG 60 Query: 70 DFVFIPLGSHHQS--------FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 D I H+ + + ++ FE + + L + + R+ Sbjct: 61 DVCMIGPQLPHEWRNDPVYFDKSSGLRATCICLFFKRQIFEPNLIRLPEMNNIRELIERS 120 Query: 122 NNAF------LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE------EQVIDD 169 + +IS + + ++ Y + ++ Sbjct: 121 RRGIKFVGKSRKKIAELISQSANETGASRVIKLIALLELMATSEEYEILASTGFTETVNS 180 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + V K K S LE + AL + R ++ KT ++ +N++RI Sbjct: 181 DDFERFNKVYKYLVKNFTSPVKLEEVAALVGLTPTAFCRYFKKRTKKTFVEYLNDMRIGH 240 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 AKK L N ++ I+ EAG+++ S FI FKK T+ P Y+KK E Sbjct: 241 AKKLLIEGNLKISTISSEAGFNNLSNFIGQFKKTTNMLPSEYQKKYKE 288 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 97/263 (36%), Gaps = 14/263 (5%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 S+ H H YEF + +G I ++ GD + + H++ Sbjct: 21 IEFDRRIGYHSMDTTHYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSE 80 Query: 85 EFGAT-RILNVGISKRFFEQH--------YLPLLPYCFVASQVYRTNNAFLTYVETVISS 135 + + FF+ P + + E+++ Sbjct: 81 LSQPNHERIVLHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRE 140 Query: 136 LNFRETGLEELVE-MVTFYVINRLRHYREEQVIDDVP----QWLKSTVEKMHDKEQFSES 190 L G + V M T ++ RH + + + + Q + + + ++ Sbjct: 141 LQECPPGYQLHVRNMATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHFREPL 200 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L+ + S+ +L+R + G Q IN RI A+ L+ T++S+T I+ G+ Sbjct: 201 PLDELAKQFFISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISERCGF 260 Query: 251 SSPSLFIKTFKKLTSFTPKSYRK 273 + S F K FK+L+ +P+ YRK Sbjct: 261 ENFSHFGKVFKELSGLSPRDYRK 283 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 96/255 (37%), Gaps = 15/255 (5%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-RILN 93 S+ H H++YE +L+G +N + +G+ + I G+ H++ Y G + + Sbjct: 19 SMKDAHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHRTTYISGGSHERIC 78 Query: 94 VGISKRFFEQHYLPLLP---YCFVASQVYRTNNAFLTYVETVI----SSLNFRETGLEEL 146 + SK F + + + R + Y E +I + +++T L Sbjct: 79 ITFSKSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKAHREMMYQDTYSLYL 138 Query: 147 VEMVTFYVINRLRHYREEQVIDDV-------PQWLKSTVEKMHDKEQFSESALENMVALS 199 + +I + DD+ + K S LE A Sbjct: 139 ASSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYICSNYQSPVTLEETAAYC 198 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S Y ++ + G + + IRI A + L T +T+IA +G++ + F Sbjct: 199 NMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIALLSGFNDSNYFGDV 258 Query: 260 FKKLTSFTPKSYRKK 274 FK++ +P YRK Sbjct: 259 FKRMKGISPCKYRKN 273 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 110/295 (37%), Gaps = 28/295 (9%) Query: 9 PEIATAREQQLFNGKNFHVFIYNKTESIS--------GLHQHDYYEFTLVLTGRYFQEIN 60 E++ E +N F V ++ T+ +H HD +FT V G ++ Sbjct: 18 EEVSKMHECPNYNDCAFPVSMHTITKYDIFPNGRGFHDVHWHDEIQFTYVSKGELTMQVE 77 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPLLPY 111 G+ +L+ G+ +FI G H + + ++ + + LP L Sbjct: 78 GREYVLKEGEALFINSGLIHVTTSISEDGQYEGFMFPEKLLGFFPGSRMEQNYVLPYLKS 137 Query: 112 CFV----ASQVYRTNNAFLTYVETVISSLNFRE--TGLEELVEMVTFYVINRLRHYREEQ 165 + + + L+ + + N +E T E V + + ++ + Sbjct: 138 NVLSVCVLYRESAEDEKILSDIRNLRELFNNKENVTAFEYEVAVRMTAIWLQIVRNVSDT 197 Query: 166 VIDD-----VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + Q + + + L+ + ++ S E R + +TPM Sbjct: 198 MQKMPACYLQRQERMKKMMQYIVEHYHEAITLKEIAESASISIEECRRCFKDIIKETPMH 257 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++ R+ + L T+ +TDIAF G++ S FI+ FKK TPK YR + Sbjct: 258 YLSSYRVMVGMELLRTTDLDITDIAFRVGFNDSSYFIQAFKKKNGMTPKQYRNHI 312 >UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RST4_9CLOT Length = 307 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 93/299 (31%), Gaps = 27/299 (9%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRY 55 M T RE Q +F Y + + H H+ E V +G Sbjct: 1 MALQDCTLNLNRTGRELQPHGTPDFPCAGYSSVYTDSAGDVVPWHWHEDLEIIYVESGHL 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA 115 ++ GK + L++G+ + H + E + ++ + +VA Sbjct: 61 KLQVPGKTLHLKQGEGAVVNSNILHFAAAEP-LCELHSLVFHPLLVTGEKDSVFSRRYVA 119 Query: 116 SQVYRTNNAFLTY---------------VETVISSLNFRETGLEELVEMVTFYVINRLRH 160 + + + + G E +V + L Sbjct: 120 PLLQCRSFDICPFDYLAGDLRAGNPAAVFTAAFDAFCGEPLGYEFVVREKLSCICCCLYM 179 Query: 161 YRE-----EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 Y + + D + + L + + + R +R Sbjct: 180 YYSHAMDSSKPMPDTDNIRIQKMISFIHEHFQENLDLAQIARAADIGERECLRCFKRAIQ 239 Query: 216 KTPMQIINEIRINF-AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +P+Q + + R+ A L + S++ IA G++SPS F + F + TP+ YRK Sbjct: 240 TSPLQYLLKYRVTQGASMLLRSPHSSISSIAGMCGFNSPSNFSQMFVRFFKCTPREYRK 298 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 93/269 (34%), Gaps = 15/269 (5%) Query: 20 FNGKNFHVF---IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 F+ F + LH H E + G F ING ++ +GD +FI Sbjct: 34 FSNAAFPFTASTTHGIFAGAQRLHWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINS 93 Query: 77 GSHHQSFYEFGATRILNVGISKRFF--EQHYLPLLPYCFVA----SQVYRTNNAFLTYVE 130 H+++ E + + + + P L F + + ++ + Sbjct: 94 NDLHRAY-ETENLVMDVIMFEPSLLSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLR 152 Query: 131 TVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQW-----LKSTVEKMHDKE 185 ++ R T L+ ++ + + P V + + Sbjct: 153 RMMEEYKARGTSYMSLIRSDLIRFLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELH 212 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 L+ + L+ S + Q+ G +P + ++R+ A LE T+ + +IA Sbjct: 213 LDYGWTLQELSDLTHLSPSRFSALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIA 272 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 G+ + S F + FK+ +P R++ Sbjct: 273 ETCGFRNLSNFNRLFKQHVGASPSEIRER 301 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 90/270 (33%), Gaps = 8/270 (2%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 +EQ+ F +Y E H HD E G Y +N ++ +E Sbjct: 6 TQLKEQKDHGTSLFPCALYEVCEEKNWSGVPHHWHDEMEILYFSKGSYTLFVNMEQFQIE 65 Query: 68 RGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLT 127 F FI G H +T + Y ++ + Sbjct: 66 EKCFYFIYPGELHAIVPHSDSTES-ALVFHPSLLGFEYKLFPQCLKPSNPAFSPFEKEYR 124 Query: 128 YVETVISSLNFRETGLEELVEMVTFY---VINRLRHYREEQVIDDVPQWLKSTVEKMHDK 184 V + ++ F +++ + + D+ T Sbjct: 125 KVFHIFHQFPEDSLSARLFIQSGIFKMAGILSTFPSLLQTERKTDMRIETIKTALDFLHS 184 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 + + ++ +++Y R ++ GK+P+ +NE RI A L+ T+ + ++ Sbjct: 185 HYQEKLYIRDLALQVNMNEQYFCRFFKKVLGKSPITYLNEYRIKQACILLQTTDLPIMEV 244 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + G+ F+K FKK T TP YRKK Sbjct: 245 GMDCGFFHLGNFMKEFKKYTETTPLQYRKK 274 >UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3766F Length = 286 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 104/285 (36%), Gaps = 17/285 (5%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 ++ E + + F + N H H+ E + L + G L Sbjct: 1 MIKNLSGVYETVEYENQRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVVSGGVEYHL 60 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQ-----HYLPLLPYCFVASQVYRT 121 + + IP G H + G R + + LP+ + Sbjct: 61 SEKEIIVIPPGELHSMPAQDG--RRIIFQCDNSVISEVPSLESILPVFSSAVHITPSLNK 118 Query: 122 NNAFLTY--VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST-- 177 L + + + + + + M ++ +R ++ ++ +++ Sbjct: 119 ELYVLARKNILDIYTEYYSKAPMADVRIYMYLITILTAIREFQLNSADENSASAAENSDE 178 Query: 178 ------VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 V K ++ E LE + +++ S+ + +R ++Y + +Q IN RI A+ Sbjct: 179 SRKFGLVTKYINQNYMYELPLEKLASIAGYSKYHFSRIFKKYNNMSYIQYINSKRIKAAE 238 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + + ++ +T++A + G+SS + F + F+K TP +RK Sbjct: 239 RLMADSSLPITEVAMQCGFSSLTTFNRAFRKAKGCTPTEFRKLFK 283 >UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC61_9FIRM Length = 298 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 106/298 (35%), Gaps = 23/298 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEI 59 + + +E + F + + + H H E TLVL G+ ++ Sbjct: 1 MAEIITDGSQKELKKHGSDEFPLLVSYEKLSGYKSGSFLWHWHPEIEITLVLDGQILYKV 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISKRFFEQHYLPLLPYCFVASQV 118 N ++ GD + H F E + +++ + Y +L +V + Sbjct: 61 NQCTYHMKAGDILLGNANVLHAGFMEDMKDGKYVSITFLPKIIYGSYGSILRRKYVEPFL 120 Query: 119 YR-------------TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ 165 + + F YV +I+ ++ E + + + E Sbjct: 121 HNFSLPAVYIDYSQPWHEVFSEYVREIITLYEEKKEFYELDITGTLQKLWRCMLQNLPEN 180 Query: 166 ----VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 + + + + ++ ++++ + +R +RY + Sbjct: 181 LPYTEHSKLERNRMREIMDYLEYNYMNKIQMKDIAEEIHLCESECSRLFKRYMNVSLFTF 240 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 + E R+ + + L ++ S+ ++A ++G++ + + K F ++ +P+ YRK+ T+ Sbjct: 241 LQEYRVERSLEFLLSSDDSIMEVAQKSGFTDSNYYAKIFSRVKGCSPQKYRKQNTKKE 298 >UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=Marinomonas RepID=A6VUH3_MARMS Length = 316 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 102/295 (34%), Gaps = 23/295 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRYFQEI 59 + RE +F Y++ S H HD E LV+ G E Sbjct: 3 IYKIETEENGRELTTHGSHDFPCESYDEHFSHFVGGEVPWHWHDEIEVVLVIEGATKVEC 62 Query: 60 NGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFF---------EQHYLPLL 109 +++ G+ VFI + H+ Y RILNV S + ++H LP++ Sbjct: 63 INSSDIVKTGEMVFINANTLHKLTNYGTEDCRILNVVFSPKMLGGMGFGLIYKKHVLPVI 122 Query: 110 PYCFVASQVYR----TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE- 164 + + + + + + + + E + + +++ Sbjct: 123 NNKELLFYKFSGAKAWHEQAINELAAAFNVWKEQGSDREFYMNIALMKFWYIFCTNQQDI 182 Query: 165 ---QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 + ++ ++ ++ + S+ R + +P Sbjct: 183 TATHNTAKANEKRIQSLLNFIHSNYEERISIADISEAANISESECYRIFRNALNCSPNSY 242 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + R+ + + L +N + DIAFE+G++ + F K FK + TP +RK + Sbjct: 243 LLNYRLRKSVQLLTESNKQIADIAFESGFNCSAYFAKKFKLAFNVTPMQFRKNYS 297 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 96/286 (33%), Gaps = 16/286 (5%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 + +A E + + F + + + LHQHD +E V+ G+ + Sbjct: 1 MEDAIIPYELPEVENHSF--FFIDQQVEVNLEAKLHQHDAWELYYVVHGQGNRMAGDTLQ 58 Query: 65 LLERGDFVFIPLGSHHQSFYEFGAT------RILNVGISKRFFEQHYLPLLPYCFVASQV 118 GD V IP H+ Y +T R L V S E+ S V Sbjct: 59 PFTAGDVVLIPPSMIHRWEYNADSTDEEGHVRYLMVAFSHSLLERCIEVFPELRNRLSGV 118 Query: 119 YRTNNAFL------TYVETVISSLNFRETGLEE--LVEMVTFYVINRLRHYREEQVIDDV 170 +A + ++S +N + + ++ + + + + Sbjct: 119 QFPTDALKFGLESSRIIRRILSEINEMDELERLSAMFRLLPVIFTSSDYTLAGKPMRIER 178 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + K AL+++ ++ +R G T Q + + R+N A Sbjct: 179 DVRRMQQICAYVMKHYVHSIALDDIAEEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTA 238 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 L+ T V +I + G++ F++ F +P YRK+ Sbjct: 239 CHLLKNTQRGVAEICYMVGFNDLPHFVRVFTNTMGMSPTKYRKQYK 284 >UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECN2_9CLOT Length = 334 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 97/268 (36%), Gaps = 20/268 (7%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 + + +H+HDY+E V G + V +++GD + + H + E Sbjct: 66 DVEDQKGYMHRHDYFEMIYVYRGGFVNVFPDHTVRMKQGDIMLLNPNILHAPYVERDDDI 125 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLT-----------------YVETVI 133 + N+ IS + +PL + + F + E +I Sbjct: 126 VFNIFISNPMIREKIIPLQKDNSLLISFFMEYLYFDSQDKKYLNFTDNSPDSILLTEKMI 185 Query: 134 SSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKE---QFSES 190 + + + + + ++L + DV T+ Sbjct: 186 EEYIEQRPFYQNMTDAYLVLLFSQLSRDYYKNHSIDVLPKNHHTLSYDIINYIGQNCRSI 245 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L+++ + YL+R ++ GKT QI+++ ++ A + T+ + DI G+ Sbjct: 246 TLDSLAKHFQYTPNYLSRLIRQSTGKTFSQIVSQQKLQRAAGFITSTDMPIVDIGQIVGF 305 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 S FI++FKK TP YRK + Sbjct: 306 YDVSHFIRSFKKEYHLTPAEYRKTFSSL 333 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 115/285 (40%), Gaps = 24/285 (8%) Query: 15 REQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E++ + IYN + E H H+ E LVL+G + +IN + GD Sbjct: 7 KEKREHGNFLLPLGIYNVSLGNIEKSIIAHWHNEIELILVLSGEFNLKINTDSYTCKDGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYLPLLPYCFV-------------AS 116 + I GS H + + N + + + L F+ Sbjct: 67 IILINSGSLHYFSTKENESSTWNSIVFNMDQLNSNILDNCSVNFITPIINNEFKLPVIIH 126 Query: 117 QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR------EEQVIDDV 170 + NN + +I + N + G E ++ + F + L + +++ Sbjct: 127 KDSLINNELKCIILNIIDTYNSKYYGFELEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEE 186 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 V + + E + + A+ +Q + R +++ GKT +Q I R+ A Sbjct: 187 KIEKIKIVLEYIQENYNKEIDINRLSAICHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKA 246 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + T+ S+T+I+ E G+++ S FI++FK+ + TPK ++ +L Sbjct: 247 ASLISNTDLSITEISLEVGFTNISYFIRSFKEKYNTTPKGFKTRL 291 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 95/240 (39%), Gaps = 7/240 (2%) Query: 39 LHQHDY-YEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +HQH+ E LV GR I+ L GD +F G H G +G+S Sbjct: 1 MHQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGVS 60 Query: 98 KRFFEQHYLPLLPYCFVASQVYRT--NNAFLTYVETVISSLNFRET--GLEELVEMVTFY 153 + A Q+ +A T T + + L++L + Sbjct: 61 DFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAPCVLDQLTCAILCK 120 Query: 154 VINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRY 213 + L + Q + L TV+ D L+++ A + YL A + + Sbjct: 121 LDEELARH--GQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAFREH 178 Query: 214 YGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 G +PMQ I RI A+ L T+ S+T+IAF GY++ + F FK+L TP YR+ Sbjct: 179 IGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRR 238 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 99/246 (40%), Gaps = 2/246 (0%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 ++++ H H+Y+E + +G+ + + L G+F+ P H S+ + G + + Sbjct: 16 NDNMAKSHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKR 75 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVT 151 L + +K + + N + ++ F + EE + + Sbjct: 76 LVLYFTKEMIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEEALYFIL 135 Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 ++ L E + + S + + L + S YL R + Sbjct: 136 NQILILLLRNSTETAKPEKQSRITS-IIHYLHENYTYPITLNELAEQFYLSPYYLCREFK 194 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 +Y T +Q IN +R+ A++ T+ SVT+I+ G+S+ + F + ++ +T +P Sbjct: 195 KYTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKS 254 Query: 272 RKKLTE 277 RK+ E Sbjct: 255 RKQAKE 260 >UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=Firmicutes RepID=B8DFE8_LISMH Length = 292 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 94/290 (32%), Gaps = 26/290 (8%) Query: 15 REQQLFNGKNFHVFIY-NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 + K F + N+ E + H H E L G +N + L+ G+ Sbjct: 4 YLEIPELNKAFPFRSFVNEGEVLVYPHWHKEIEIIYALKGSLNLGVNDMPIQLKEGEIQV 63 Query: 74 IPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN---------- 123 I G H F ++ + + F++ + + + Sbjct: 64 INGGDVHY-FLASPSSERVVIQFDLSLFQEEMQMDDQMQTLREMLTEMAHLSREWPEETV 122 Query: 124 -AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVI-------------DD 169 + + + + + G +++ +I + + Sbjct: 123 AKMQSLIMNIHEESSGEKPGKHYILKADLLAIIGLIYREIPQIKTQPDSVISEEAVLKSQ 182 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + +K +L+ + + S Y T+ +R G T + +N+ R+N Sbjct: 183 ETLHKLDQIFSYVEKHYQEPVSLQEVANYTGFSTYYFTKFFKRNTGMTFVTFLNDYRLNK 242 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 AK L + VT++A AG+SS F FK+ P YRK + N Sbjct: 243 AKWMLLNEAFPVTEVAELAGFSSVKTFHHAFKRAMGVAPLKYRKTIYGNN 292 >UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU1_BACSK Length = 308 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 114/292 (39%), Gaps = 27/292 (9%) Query: 13 TAREQQLFNGKNF------HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 A ++QL +G + H+ I+ H HD E +GR ++G+ L+ Sbjct: 6 DAYKEQLPSGNDIREPIHCHMQTSEPNRRIASPHFHDAIELLYSFSGRARVFVSGQPFLM 65 Query: 67 ERGDFVFIPLGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA- 124 E+GD V I H + E G L + + + +V ++ Sbjct: 66 EKGDLVIINSNEVHAIWGESGEKVEYLVIKLDPEVLYSTSRSIFESKYVFPFTMSKSSPQ 125 Query: 125 ------------FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE-------Q 165 + + + ++ G + + + + + + + + Sbjct: 126 TLLKSGEMASTVIPATIAKINDEFSHKDYGYDFAIRIHICTIFLAVLRHWRQSGISVGTE 185 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 I+D L V ++ + + + A S Y +R + G++ +++N I Sbjct: 186 SINDSDFQLMRQVFQLLESHYATALTAKQAAATCNLSYSYFSRKIKSITGRSFTELLNYI 245 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 RI A+K L T+ S+T++A GYSS S FI+ FK+ +P ++K+L + Sbjct: 246 RITEAEKLLTTTDLSITEVAVSVGYSSTSYFIQHFKQAKHLSPLRFKKRLQQ 297 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 102/278 (36%), Gaps = 26/278 (9%) Query: 25 FHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-QS 82 FH+ Y K ++ LH+H++ E + G E G + GD I G H + Sbjct: 18 FHIEPYELKQGTMIPLHRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYT 77 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-------------------RTNN 123 + ++NV E+ L Y R Sbjct: 78 VEQSEGMEVVNVLFVPALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMM 137 Query: 124 AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ-----WLKSTV 178 +E ++ +E+G + L++ + L +P + + + Sbjct: 138 DIRGILEQLMKEYGNKESGYQFLIKSKLIELFIILSRIYANNRNHSLPSIQNDGEMIARI 197 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + Q +LE + ++ SQ T ++ G + ++ N+ RI AK+ L ++ Sbjct: 198 CEFIKRHQAHPLSLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASS 257 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + IA + GY S F FKKLT TP YRK++ Sbjct: 258 DKIARIALDTGYEDLSHFNHVFKKLTGETPSLYRKRMK 295 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 101/286 (35%), Gaps = 20/286 (6%) Query: 11 IATAREQQLFNGKNFHVFIYN---KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 ++++ KN+ +F+ + T LH H+ E + +G + ING++ + Sbjct: 7 EEAIPKEKVILAKNYPIFVADTIGVTSPYQKLHWHNVLEINYIKSGMGYYIINGQKFEFQ 66 Query: 68 RGDFVFIPLGSHHQSFYE----------FGATRILNVGISKRFFEQHYLPLLPYCFVASQ 117 +GD + I H ++ I N+ F Y + + Sbjct: 67 QGDVLLINSNDLHCAYETKDLVMTVISFDSTWFIHNLRFDPELFSPFREMGKHYMNLIPR 126 Query: 118 VYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR-------EEQVIDDV 170 + + + + + +V + + + E I + Sbjct: 127 DHPAMGKLRSLLFELQEEHVGEQRSYATVVYSLLLQFLATVNRQCRIEGEGGSEPSISER 186 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 V + ++ LE + +L S + +R G P+ + IR+ A Sbjct: 187 QLEKMRQVIMVMEQNFAHPWTLEELASLVYLSPSRFSEIFKRAVGMPPLLYLIHIRLEQA 246 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 LE + V D+A E G+ + + F + FKK TPK+ +K+ + Sbjct: 247 VTMLEGGHMKVMDVALECGFRTLTNFNRLFKKHIGMTPKASQKQHS 292 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 94/278 (33%), Gaps = 15/278 (5%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E T + +H I+ H H YE +++G I K + G Sbjct: 6 ETHTVSYGEEEGEFYYH-RIHRTKPFERNNHYHGTYEIYYLVSGERHYFIKEKLYSIRAG 64 Query: 70 DFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYL--------PLLPYCFVASQVYR 120 D + I H++ + + S F + + + Sbjct: 65 DLILINKFDVHKTSGHGDPEHERIVINFSDSFLGKGHPLLASGLLGMFNQDRPLLRLTVP 124 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID-----DVPQWLK 175 + + + + R E +++++ ++ + + + Sbjct: 125 EQAIIMQILNKMADEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKI 184 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + V K + L+ + S YL+R + G T + +N RI A++ L Sbjct: 185 TDVVKFIHVHYADKITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLT 244 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 T+ + DIA G+ S + F +TFKK+ + T YRK Sbjct: 245 DTDLKIVDIAESIGFESLTHFDRTFKKIMNMTASQYRK 282 >UniRef50_Q0ST06 Transcriptional regulator, AraC family n=13 Tax=Clostridium RepID=Q0ST06_CLOPS Length = 686 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 100/268 (37%), Gaps = 14/268 (5%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 + V I LH HD E VL G +I+ ++ + + H+ Sbjct: 9 PSDIPVTISYVNIKNYPLHWHDAIEILYVLKGSIKVDIDTDSYEIQEDEIEIVNTEQTHR 68 Query: 82 SFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS------QVYRTNNAFLTYVETVISS 135 + R+L I FFE++Y + F + Q + + ++ ++ Sbjct: 69 IYS-NKDNRVLIFKIDPHFFEKYYSDIENMFFYTNTSDEGAQSDESYDKLRVFLSIILCE 127 Query: 136 LNFRETGLEELVEMVTFYVINRLRHY-------REEQVIDDVPQWLKSTVEKMHDKEQFS 188 + ++ +E ++ L + +E +++ + K Sbjct: 128 EAQKVDDYDKYIEKSLVELLFHLLNNFHYLLYDNDEIHENNMLLERYHRISKYIYNNYNK 187 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 L+++ S YL+ + G + ++N R+ + K L T+ S+++I++E Sbjct: 188 NITLKDIANTEFLSTHYLSHEIKYATGLSFTDLLNLTRVEESVKLLLDTDKSLSEISYEI 247 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G+S F K FK + TP +RKK Sbjct: 248 GFSHTRYFNKHFKAYYNCTPLQFRKKHK 275 >UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIX6_9CLOT Length = 330 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 102/275 (37%), Gaps = 21/275 (7%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 V ++ LH HD++E V G + L GD + + + H Sbjct: 53 PDEILVSLHRGNHRDRYLHNHDFFELLYVYKGSCVNMTREGEMPLNEGDLLLLNPNALHA 112 Query: 82 SFYEFGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTN-------------N 123 F ++N+ + FE L L+ F + +Y N + Sbjct: 113 PFAPGEENIVVNIIVRPSVFENVMLSLIADNKLFSNFFVNYLYHINMTTSYLYFPKDEEH 172 Query: 124 AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD 183 ++ +I+ + +++ + + L + ++ + KS + Sbjct: 173 PIKFIMDMLIAEYLSHDICYTNVMQAILVQLFAALARSYRKMNKVEIEDFEKSQLVVDII 232 Query: 184 KEQFSES---ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 L+ + S Y+++ Y GK +I++ +R++ AKK LE + + Sbjct: 233 SHINQNIATVTLKELSERFQYSSSYISKLINSYTGKNFSEIVHFLRLDRAKKYLENKDLT 292 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +T+I G+S + F K FK + +P YRK++ Sbjct: 293 ITEITQAVGFSDSNYFYKVFKNRFNLSPSEYRKQV 327 >UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJC5_9CLOT Length = 309 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 108/307 (35%), Gaps = 33/307 (10%) Query: 1 MMQPVINAPEIAT-AREQQLFNGKNFHVFIYNKTES--------ISGLHQHDYYEFTLVL 51 M N +I E + K F + +Y T+ LH H+ +FT+V Sbjct: 1 MKMQRYNPKQIEKPLHEINYYTDKGFPIEMYTVTQGNIEPSGRGYMDLHWHEELQFTVVT 60 Query: 52 TGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPY 111 +G+ ++GK L+ G+ +FI H + R L+ + + Sbjct: 61 SGKLKLRVDGKLYTLDEGNGIFINRNLLHITTEISDGGRYLSFNFPDKVVSFFSGSTMEE 120 Query: 112 CFVASQV-------------YRTNNAFLTYVETVISSLNFRET--------GLEELVEMV 150 FV V L + + R + +++V Sbjct: 121 NFVLPYVGNYGIAVVEFKRTTSWQKEILDTLLKMELLFKRRREKRQAVGREEYQIAIKIV 180 Query: 151 TFYVINRLRHYREEQVIDDV---PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 + + + + I + Q + + L ++ S Sbjct: 181 EIWYMMICNIEKSGKKISNSYIRKQERIQAMLSYIHNQYMHPMCLADIAQAGNVSVGECC 240 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R + K+P + + E RI +K+ L T SVT+++ G++S S FI+ FKK+T T Sbjct: 241 RGFKEVVCKSPNEYLAEYRILRSKELLRGTELSVTEVSGAVGFNSVSHFIQCFKKMTGVT 300 Query: 268 PKSYRKK 274 PK+Y+ Sbjct: 301 PKAYKNM 307 >UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C7G9X0_9FIRM Length = 303 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 101/294 (34%), Gaps = 22/294 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEI 59 T RE + Y H H EF G I Sbjct: 8 TFKITTDETLRETIQHGNNRYPFAYYPDNIWKFDFHRIDWHWHHELEFLYTAEGTALCLI 67 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPY 111 ++ L +G +FI G H+ + +T N+ S E++ LP++ Sbjct: 68 GTSKIELHKGCGIFINSGVLHRFEAQS-STFAPNIVFSPTLLAPENSLIYEKYILPVISS 126 Query: 112 CFVASQVYRTNNAFLTYVETV--ISSLNFRETGLEELVEMVTFYVINRLRHY------RE 163 +N ++ + I ++ + E + F + N L+ Sbjct: 127 SVPYQVFSPSNTFGKQVLQLLSQICTIQETKPDNELCTIQLLFQLWNILQKNMDWTSDSN 186 Query: 164 EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 + Q + + E LE + A ++ S+ Q +P+ + Sbjct: 187 SIHRLNHKQARLQAMMQYIHDHYMEEITLETIAASASISKSGALHIFQTGIHCSPVAYLI 246 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + R+ A +QL +T SV+ IA E G++S F + F++ +P YRK+ TE Sbjct: 247 QYRLAQAAEQLYITQKSVSSIAEETGFTSSGYFCRKFRQYYHMSPNEYRKRKTE 300 >UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDW5_9CLOT Length = 326 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 19/265 (7%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 N+ + LH H Y+E V G+ + + L GD + + H+ + E Sbjct: 58 YENEQKKYLRLHTHTYFEMIYVYHGKAYNNFADSSMTLHTGDILILNPNIPHRLYIESPE 117 Query: 89 TRILNVGISKRFFEQHYLPLLP-----YCFVASQVYRTNNA-------------FLTYVE 130 + N+ ISK FE+ +L L+ F S +Y N A ++ Sbjct: 118 DIVFNIMISKDLFEKSFLLLISENDLFSNFFISYLYHMNQASDSILFRHNPESGITAVLD 177 Query: 131 TVISSLNFRETGLEELVEMVTFYVINRLRH-YREEQVIDDVPQWLKSTVEKMHDKEQFSE 189 +I + G E+ +E RL Y ++ ++++ + K + +E F+E Sbjct: 178 MMIEEFFNKPMGYEKALESFLALTFTRLTRSYSHQENLEELKKQQKIMPIIAYIRENFAE 237 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 + L + S++YL+R ++ GK+ +I ++ +A++ L + +++IA G Sbjct: 238 ATLVSTAQQFNYSEKYLSRLIKQRTGKSFNEISIGYKLEYARELLLNSVLPISEIAQRVG 297 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKK 274 Y++ S F K FKK TP +RK Sbjct: 298 YANVSYFFKAFKKRYMQTPYQFRKS 322 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 113/268 (42%), Gaps = 13/268 (4%) Query: 20 FNGKNFHVF-IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 FN + +V Y I H HD+ E +++ G+ +I G+RV LE+GD + G Sbjct: 9 FNPQILYVANCYTNEVRIGDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGV 68 Query: 79 HHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN 137 H E G L++G E + P+ + ++A L+ + +I + Sbjct: 69 KHYDITEPGMTNAQLHIGFRNFTLEGYSRNTFPFKKAFLRKKEEDSAILSISKQIIEEKD 128 Query: 138 FRETGLEELVEMVTFYVINRLRHYREEQVIDDV----------PQWLKSTVEKMHDKEQF 187 + G + +++ +I + + +++ Q L + + +K Sbjct: 129 AEKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEKHHT 188 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + +L + S Y+++ + G++P+ + +IR++ A++ L+ N +V A Sbjct: 189 EDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQAANM 248 Query: 248 AGYSSPSLFIKTFKKLTSFTPKS-YRKK 274 GY+ F K FKK F P +RK Sbjct: 249 VGYNDAYYFSKLFKKYYGFPPSENWRKS 276 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 103/281 (36%), Gaps = 19/281 (6%) Query: 13 TAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 +E V Y T LH HD +F L+L G +IN +++ + Sbjct: 9 NLKELTEHRTVELPVACYKTTINQNINGYIPLHWHDEIQFVLILKGIALFQINEEKIEVH 68 Query: 68 RGDFVFIPLGSHHQSFY-EFGATRILNVGISK----------RFFEQHYLPLLPYCFVAS 116 GD +FI G H + E + + +S + + + + Sbjct: 69 EGDGLFINSGYLHMAEEKEGSDCTYICLNVSPHFVLSQELYSSYVQPYMFSTNLPYLFLA 128 Query: 117 QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHY---REEQVIDDVPQW 173 + L V+ + + + + E + M + L E + + Sbjct: 129 GNQQWAKNILDAVKKINQLIQQKTSLYEIDITMQLTLMWKNLVVNGFQLEYDQSEMIKSH 188 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + + LE++ S+ R +R KTP++ + + RI + Sbjct: 189 RMKQMLNWIHLHYVEKITLEDIAKAGQLSRSECCRYFKRMLNKTPLRYVMDYRIQKSLLL 248 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L+ +VT+++++ G++S S FI F++ + TP SY+K Sbjct: 249 LQHPESNVTEVSYQVGFNSTSYFISKFQQAMNMTPLSYKKM 289 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 95/282 (33%), Gaps = 16/282 (5%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 E + + F + + + LH+HD +E V+ G+ + E GD Sbjct: 8 YELPEAENHSF--FFIDQRTEPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEAGDV 65 Query: 72 VFIPLGSHHQSFY------EFGATRILNVGISKRFFEQHY--LPLLPYCFVASQVYRTNN 123 IP H+ Y E G R L V E+ P L Sbjct: 66 ALIPPSMLHRWEYAADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDAL 125 Query: 124 AFLTYVETVISSLNFRETGLEELVEM-VTFYVINRLRHYRE-----EQVIDDVPQWLKST 177 F VI G++EL + F ++ + + + + + Sbjct: 126 KFGPESVRVIRKTLSEMNGMDELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQ 185 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + K AL+++ A ++ +R G T Q + + R+N A L+ + Sbjct: 186 ICAYVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHS 245 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 V++I + G++ F++ F P YRK+ N Sbjct: 246 QKGVSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQFKAGN 287 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 111/286 (38%), Gaps = 29/286 (10%) Query: 13 TAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFV 72 + E+ N H+ I H+HD++E V G ++ V+L++GD Sbjct: 54 SFFERDQLISANMHLNI----PMALAPHKHDFFELIYVYQGSVINVVDAHEVVLQQGDLC 109 Query: 73 FIPLGSHHQSFYEFGATRILNVGISKRFFEQHYL-----PLLPYCFVASQVYRTN----- 122 + + H + N+ I F Q +L + F + +Y+ + Sbjct: 110 IMNASAVHTLGKLGKQDTVYNILIKPELFNQAFLGLIAENEIISSFFLNSIYQKSISRNF 169 Query: 123 ----------NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQ 172 + TYV +I +F++ + +E+ + L + + + Sbjct: 170 MTFHTQDFPSDDAETYVHRLIMENHFKDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSI 229 Query: 173 WL----KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 L S + + +++ + + YL+ ++Y KT +I+ IR Sbjct: 230 ELGMSNVSQIIAYISDHY-KDISIKQVADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFT 288 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 AK+ L+ + + +I + GY++ S F +TFK+ TP YRK+ Sbjct: 289 AAKEYLQKLDIPINEIVYMVGYTNKSHFYRTFKQEMGITPAQYRKQ 334 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 96/282 (34%), Gaps = 27/282 (9%) Query: 23 KNFHVFIYNKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 + +Y T S H HDY++ V G + + + + +GD IP + H Sbjct: 29 EGLPCKMYKLTYQQSLWTHCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHS 88 Query: 82 -SFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT------------------- 121 S I F + + + Sbjct: 89 VSISPDEDIEIYGCEFMPSFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVT 148 Query: 122 NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRH------YREEQVIDDVPQWLK 175 + ++ ++ R + ++ +++ L RE + + + Sbjct: 149 DVTVRNVLKDMLIEYERRTPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIM 208 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + V + L ++ +LS S+ + + GKT + + ++RI A L+ Sbjct: 209 TRVVDHIHNHYQEDMNLNDLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLK 268 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 SVTD+ + G++ S F + FKK T +P +RK+ + Sbjct: 269 QPELSVTDVCYSTGFNELSYFCRIFKKYTGISPTDFRKQAMK 310 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 101/287 (35%), Gaps = 25/287 (8%) Query: 12 ATAREQ--QLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 REQ N + + + + H HD+ E +L+G +I + + G Sbjct: 3 CDNREQLLDQLNPTFLFTWKGTRLKDEARYHSHDFIEMAFILSGHGKYKIADRLYDVSEG 62 Query: 70 DFVFIPLGSHHQSFYEFGAT---RILNVG-------ISKRFFEQHYLPLLPYCFVASQVY 119 D + + G HQ+ + + + H L S + Sbjct: 63 DIIILNPGQKHQALCTDPSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDPATQSPIL 122 Query: 120 RTNNAFLTYVETVISSLNFRET----GLEELVEMVTFYVINRLRHYREEQVI-------- 167 T+ + + ++++ G +++ ++ L + E V Sbjct: 123 HTSGELRQKLFKICTAMSVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKINTGCSFE 182 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 +++ + + + +L+ + S Y++R + G TP++ + IR+ Sbjct: 183 STSKKYVVDQIVNYFEDHYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIRHLINIRL 242 Query: 228 NFAKKQLEMT-NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 AK+ LE + S+ ++A + GY F K FKK P R+ Sbjct: 243 EKAKELLENGFDGSIQEVAAKVGYDDVYHFSKLFKKRFGMPPSKIRR 289 >UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G6_9CLOT Length = 299 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 99/292 (33%), Gaps = 23/292 (7%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGL-----HQHDYYEFTLVLTGRYFQEING 61 +E + F + + S H H E +V G Q I Sbjct: 5 KIQTDKEGKELRQPLDGKFPIAAEFQKLSYYAYGLCISHWHPEMELLVVTEGALEQRIGE 64 Query: 62 KRVLLERGDFVFIPLGSHHQS-FYEFGATRILNVGISKRFF---------EQHYLPLLPY 111 + ++ + VFI H + + E++ L Sbjct: 65 ETHMIRENEGVFINSHVMHGARMVNREDCSYRVIRFEPALLGGNAKSLIYEKYVKTLQSQ 124 Query: 112 CFVASQVYRT----NNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLR----HYRE 163 + ++ R + + + + RE E V+ + + L H E Sbjct: 125 KDLLYRIVRPEDIQQRRMIDLIYKITDTYVKREVCYELKVQQMMLELWELLYKRTGHVEE 184 Query: 164 EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 + + + + LE++ S+ R ++ + ++PM+ + Sbjct: 185 NAIQMNRELYKIQDALAYIQMYYKNPMTLEDIAGACMLSKSSCCRLFKKVFRQSPMEYVT 244 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 RI + + YS+T+IA+E+G+++ S F + F+K+ TP Y+K++ Sbjct: 245 SYRIQQSFMLIADDRYSITEIAYESGFTNSSYFTEMFRKVIGMTPTQYKKEI 296 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 106/285 (37%), Gaps = 18/285 (6%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 ++ F +++ E G H H++ E T V G I G+ V Sbjct: 1 MSIKRSTYVMSASSFFEPGVPLYVNRAYESFDMGEHSHEFVEITYVSEGAGIHYIAGEAV 60 Query: 65 LLERGDFVFIPLGSHHQSFYE----FGATRILNVGISKRFFEQH-----YLPLLPYCFVA 115 +E G FIP+G H + + N + + + Y + CF Sbjct: 61 PVEHGTLFFIPVGQSHVFRPKTPKKDRPLIVYNCLLPASYLSELRDGFPYATEILDCFAD 120 Query: 116 S-----QVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID-- 168 V + + + + ++ + ++ L ++ + + Sbjct: 121 EGLSWFSVKDSTGEYHAMFRELYQEFAAKPPAYMAVLASLVMRILTGLYRHKLQIIAPAG 180 Query: 169 DVPQWL-KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 D PQWL D+ SE L + A + S+ +R +R+ G + ++ + IR+ Sbjct: 181 DRPQWLSVDEAIAFIDRNYASELKLGELAAQAKLSERQFSRLFRRHTGMSLIEYVQSIRM 240 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + A + L + SV DIA GY+ F + FKK T TP+ YR Sbjct: 241 DAACRLLTTRHSSVEDIAGAVGYADMKFFYRLFKKKTGVTPRQYR 285 >UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=Clostridium RepID=A5I5L7_CLOBH Length = 688 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 103/268 (38%), Gaps = 14/268 (5%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 + + + + S +H H+ E VL G I + + + + I H Sbjct: 9 TNDLPIKVSMQNIKKSPIHWHNAMEVIYVLEGSIKITIETESHRVNKQEIGIINPEEAHS 68 Query: 82 SFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS------QVYRTNNAFLTYVETVISS 135 ++L I FF ++Y + F Q + + Y+ T++ Sbjct: 69 IKSITNNNKVLIFQIDTSFFNKYY-DIENMFFYTDFSAPEAQKHEKYDVLRKYLSTLLCE 127 Query: 136 LNFRETGLEELVEMVTFYVINRLRHY-------REEQVIDDVPQWLKSTVEKMHDKEQFS 188 + + E++VE + ++ L + EE ++V + K + Sbjct: 128 IAQKGDNYEDVVEEILVDLLYHLINNFHYLIYDEEELKENEVQFERYDRIIKYIYSNYNN 187 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 + +++++ L S YL+ + G + +N R+ A K L T+ ++++I+ E Sbjct: 188 KISIQDIARLEFLSSHYLSNEMKNKVGYSFNDFVNLTRVEEAIKLLLDTDKTISEISEEL 247 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G+S F K FKK TP YRKK Sbjct: 248 GFSHTRYFNKHFKKHYKCTPMQYRKKYK 275 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 12/270 (4%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 +PE TA+ L N + + + S H H + E V G+ I + + Sbjct: 9 SPEHPTAQNITLLNTSSSR----YEGDWPSIPHSHAFTELFYVRDGQGDFLIEDQIFPIS 64 Query: 68 RGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL 126 + D V I +H + VG+ F + Y + +T+ L Sbjct: 65 KDDLVIINPHINHTEISKGSPPLSYFTVGVDGLCF--SFNGHKEYRIFNCREKKTD--LL 120 Query: 127 TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYRE---EQVIDDVPQWLKSTVEKMHD 183 Y ++ L+ + G E + + +I +LR + E + P + +++ D Sbjct: 121 FYFNSLFQELDRQSEGYETICSHMLDILILQLRRITDSPFELITAQHPSKECAHIKRYLD 180 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 L+++ LS ++ YL+ +YYG +P+ +N RI K+ LE T+Y ++D Sbjct: 181 SNYGENITLDHLSELSHLNKYYLSHEFTKYYGISPINYLNRKRIEVCKELLENTDYGISD 240 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 IA G+SS S ++F+K T +YRK Sbjct: 241 IAHLTGFSSQSYLSQSFRKSCGMTAGTYRK 270 >UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Clostridium RepID=Q187Y6_CLOD6 Length = 298 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 104/262 (39%), Gaps = 16/262 (6%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 K + H H++ + + G + E + G+ V H + Sbjct: 26 KKGANFKRHWHEHLQIYYFIDGIAYLECGLDNFKVVPGNIVIANSNELHYLESLSDNLKF 85 Query: 92 LNVGISKRFF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETG 142 ++ I F ++ PL V + + + ++ L + T++ + +E G Sbjct: 86 YSIRIEPTFLFSNQVDLLQTKYLAPLALNHIVFNNLIQNDSLILKCITTILDEYHNKEVG 145 Query: 143 LEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST-------VEKMHDKEQFSESALENM 195 E ++ + +I L +++ + + + + +++ + L+ + Sbjct: 146 YELSIKANIYQLIVLLLRSHIDKIYSEDEFIKRKYSLEKFECIFDLIEEKYMDKITLKEL 205 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 + S + R ++ GKT + IN IR++ A L+ T+ ++T+IA G+ S + Sbjct: 206 ASRVNLSAHHFCRTFKQITGKTTIDFINGIRLDKAIYYLKETDLNMTEIAMRCGFDSINY 265 Query: 256 FIKTFKKLTSFTPKSYRKKLTE 277 F + FK+ + +P YR + E Sbjct: 266 FSRLFKRNYNISPTKYRNEHRE 287 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 102/288 (35%), Gaps = 24/288 (8%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 AP ++ E+ N F VFI E H H Y E V++G + + + Sbjct: 11 KAPAHHSSIEEHFHNQ--FPVFINRWEEGFDLREHDHAYLEIVYVMSGEGYHYVADEVNK 68 Query: 66 LERGDFVFIPLGSHHQSFYEFGATR--ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN 123 +G IP+G+ H A R + N+ I + + + L YC ++ + Sbjct: 69 TSKGSLYIIPIGTSHIFRPNGTANRLLVYNLCIRPDWIGELGVWLSQYCRDTDVLHVLDG 128 Query: 124 -------------AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID-- 168 E + G E V ++ R+ + Q Sbjct: 129 NPGTYLFLRDTPLELAPSFEQLHREFTEESWGFETTVLAGLLQLLTRISRKLKTQDSTGD 188 Query: 169 ----DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 ++ + ++ +E + + SQ + R ++ G + + Sbjct: 189 QTTGSTRHSEFVSIVEHINRHIAEPLKMEQLADQAGISQRHFIRLFRQQTGMGFSEYVQN 248 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 R+ A + L T+ SV DIA + GY P+ F + F+K+ TP YR Sbjct: 249 KRVELACQLLTGTSQSVADIAKKVGYQDPAHFREVFRKVMGITPSQYR 296 >UniRef50_B0A839 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A839_9CLOT Length = 303 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 100/287 (34%), Gaps = 24/287 (8%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRYFQEING 61 + E++ + F + T H H F+++L G +N Sbjct: 4 KIVVASNLLEKKNYGDYTFPIDFDYNTLFAYEYGFLDYHWHYEMTFSVILEGSMEYRVND 63 Query: 62 KRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLP---------- 110 K +++GD +FI + H + Y L + F H ++ Sbjct: 64 KIYEMKKGDGLFINSHTLHTAKGYNNKDCAFLALMFRPNFIFGHEESIIKTKYIDIIENG 123 Query: 111 ---YCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRH-----YR 162 F + +T+ ++ V + E LV+ + + + + Sbjct: 124 GQCPSFFFNSNNKTHQKIMSLVLEANDIFQNKGPCYELLVKSKVCEIWSLFFNEVSFILQ 183 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 E+ V + S + ++ L+++ S+ R ++ +TP + + Sbjct: 184 EDNVSNSNDVVRLSKILNFIHSNYKNKITLDDISECCNISKSECCRFFKKATRQTPFEYL 243 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 RI + L Y++T+I+ G+S+ S + + FK++ +P Sbjct: 244 LNYRIKKSIPLLLSDQYNITEISESVGFSNASYYTEIFKRVMDLSPT 290 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 97/254 (38%), Gaps = 10/254 (3%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE-FGATRILN 93 + H H YYE +L+G IN L GDFV IP + H+ Y+ + N Sbjct: 25 HMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMHRFVYDCNSTVKRYN 84 Query: 94 VGISKRF----FEQHYLPLLPYCFVASQVYRT---NNAFLTYVETVISSLNFRETGLEEL 146 + + F F +L + F ++ T +T+ +++ + + Sbjct: 85 LFFTMDFAASLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTLYQETVGQDSCSQAV 144 Query: 147 VEMVTFYVINRLRHYREEQVIDDVP--QWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 + +++ L R+ + D+ + + +L + S Sbjct: 145 IPAYISLILSLLVRNRDHIQLQDLDSAENAIQASARYISTHFQEPVSLHMVADYVHMSPT 204 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y ++ ++ G + + + R+ A + L T+ +VT+IA G++ + F F+K Sbjct: 205 YYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRCGFNDGNYFGDAFRKEF 264 Query: 265 SFTPKSYRKKLTEF 278 +P YRK+ Sbjct: 265 GLSPLQYRKRQKNL 278 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 92/295 (31%), Gaps = 21/295 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 ++ P+ P ++ F H H E T V G I+ Sbjct: 2 LLSPLETTPNEEQ---RKHLLPYRFFHNEVKNGRPDILFHWHPELEVTYVCEGTARYHID 58 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRIL-NVGISKR-------------FFEQHYL 106 + GD + I H I N + + Sbjct: 59 YDFFNSQAGDIILIRPNGMHSIHPIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQN 118 Query: 107 PLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQV 166 + + + + + S E L++ I L +R Sbjct: 119 SVNKFVHCIKPHMPGYDDIKACLFDIFSLAKEESRHFEILLKSKLHEFIYLLYFHRYVVK 178 Query: 167 IDDVPQWLKS----TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + + K+ + + ++ + S+ + +++ G + + + Sbjct: 179 KNTDDTYRKNEKIRQLIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFV 238 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 ++R++ A + L + + +IA E G+++ S F + FK+ + TP YRKK T+ Sbjct: 239 IQVRLSKACELLIHSTRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKYTK 293 >UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV13_PAESJ Length = 285 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 98/283 (34%), Gaps = 19/283 (6%) Query: 8 APEIATAREQQLFNGKNFHVFIYN---KTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 I T + F + I + LH H E + G + ING R Sbjct: 1 MKPIPTVTRDLIELPPAFPIVISQSEGVSPLFQRLHWHTALEINYISRGSGYYLINGTRY 60 Query: 65 LLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--EQHYLPLLPYCF------VAS 116 GD + I H++F E + + +F EQ Y L F + Sbjct: 61 DFREGDILLINSNDLHRAF-ENEGLVMTIIMFDPAYFALEQRYDTELLIPFREIGMRFDN 119 Query: 117 QVYRTNNAFLTY---VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQW 173 + R + +E + RE E ++ + + Y ++ + Sbjct: 120 MLDRGHPILPRLGAAIEEMRCEFAGREPHYEAVIRSQLVQFMAFVNRYFAKEQERRSSRI 179 Query: 174 LKSTVEKM----HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + ++ + + L+ + A + S + + G +PM + ++R++ Sbjct: 180 RGMEIVRLTLNTIEADIAYPWTLKELAAAAHLSPSRFSALFVQTVGTSPMDYLIQLRLSA 239 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A LE ++ + ++A AG+ + S F + FK+ P R Sbjct: 240 AVSLLESSDKKIIEVAESAGFRNLSNFNRLFKQHIGKQPSELR 282 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 97/251 (38%), Gaps = 8/251 (3%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYE-FGAT 89 ++ S LH H + E V+ G + + ++ ++ D + I H + G Sbjct: 25 DSDWHSTLHSHPFAELMYVVRGSGYFRFADNLKLPIQADDLIIINPNVLHTECSDAEGGL 84 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEM 149 + +GI F + + L Y++ ++ + + E +VE Sbjct: 85 EYIVLGIDGVEF--YTEQNAHPGVSIHNYEDYKHEILFYIKAILEAGKTHDEMSELIVEN 142 Query: 150 VTFYVINRLRH----YREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 + ++ + + +E + L+++ +L+ ++ Y Sbjct: 143 LLRVLVLNTMRRTTSLLDVETSTGGDNKDCIFLEHYLNLHYRENITLDHLASLTFLNKFY 202 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L+ + G +P+ + R+ AKK L T+ S+T I+ G+ SPS F + FK + Sbjct: 203 LSHIFKEQTGLSPIDYLLRKRMIEAKKLLINTDLSITQISDIVGFRSPSYFSQFFKNMEC 262 Query: 266 FTPKSYRKKLT 276 +P S+R K Sbjct: 263 MSPSSFRNKHK 273 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 104/284 (36%), Gaps = 16/284 (5%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 + E + K+ + ++N H H +E + Y K + Sbjct: 1 MIENLVGLHETVNYR-KDMQIRLHNNDVCENYPPHWHTPFELIMPTESGYSVHCGEKEYV 59 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNV----GISKRFFEQHYLPLLPYCFVASQVY-R 120 L+ GD + I G H+ F RI+ + I + + + P ++ + + + Sbjct: 60 LDEGDIIIICPGVIHELFSPPKGVRIIFLVSLAQIDLQELDLVISMISPAILISPEKFPQ 119 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST--- 177 + + + E + ++ + E + Sbjct: 120 IHAQIHRLMLEIRDEYFRNLPYTESSIYAKFLEILVLVGRCYAEIAQHNFEAKNNKQQEY 179 Query: 178 ------VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + ++ +LE + +L+ S+ + TR ++Y T + +N+ RI AK Sbjct: 180 MEKFLFICNYINEHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAK 239 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 L N SV DI+ + G+S+ S F++ F+KLT FTP RK Sbjct: 240 HLLVDKNLSVLDISLQCGFSNLSSFLRMFRKLTGFTPTELRKMY 283 >UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBD9_CLOBU Length = 302 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 105/298 (35%), Gaps = 28/298 (9%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEI 59 V A E + F + +Y +I H H EF ++ G+ Sbjct: 3 VNKVTVDANLLETTSHGNREFPMDVYRDDFSKYYTNIINWHWHPEIEFVMITKGKIEYST 62 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFG--ATRILNVGISKRFFEQHYLPLLPYCFV--- 114 + ++L GD +FI + H + G + + +V +S + ++ +V Sbjct: 63 EEETLILREGDGIFINSNTLHMAKSIDGYQDSLMFSVVVSPKLIYNDTESIIYKKYVKPI 122 Query: 115 ----------ASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRL------ 158 + L+++ + + E G E +++ + + Sbjct: 123 VECSKLSYLKLDKYNTWQKQILSHLLYIDALKFNEEHGFEFIIKNQISLIWQLIALNTSH 182 Query: 159 --RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK 216 H + Q + + K F+ ++++ + S+ R ++ Sbjct: 183 LYLHNNCLINSHSLSQERLKQMLRFIHKNYFNNITIDDIAKSANISRSECFRCFKKMINT 242 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 P + + R+ + + L T+ V+DI + G++ S + K F++ +P SYRK Sbjct: 243 KPFSYLTDFRLEKSLQLLLETDIPVSDICYSCGFNHSSYYGKLFREKFGISPSSYRKS 300 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 101/268 (37%), Gaps = 13/268 (4%) Query: 21 NGKNFHVFI--YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 NF + N + S+ H+H Y+E +L G ++ +++GD + + Sbjct: 12 GDHNFSIQYMSRNGSSSMPRPHEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHD 71 Query: 79 HHQSFYEFG-ATRILNVGISKRFFEQ---HYLPLLPY--CFVASQVYRTNNAFLTYVETV 132 H + + +G S+ F EQ LL + + + + ++ Sbjct: 72 LHSTASSEKLLFERVLIGFSRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSM 131 Query: 133 ISSLNFRETGLEELVEMVTFYVINRLRHY-----REEQVIDDVPQWLKSTVEKMHDKEQF 187 ++ +T LV + ++ RL + + S + + Sbjct: 132 LAECQTEQTHYSSLVRSLMNELLIRLHRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFH 191 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + LE + S YL+R R G + + +RI A+K L + SV I+ Sbjct: 192 EKLTLEQVAKQFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISEL 251 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 AG+ + F KTFKK+ TP YRK+ Sbjct: 252 AGFEHIAHFNKTFKKIAGTTPLQYRKRH 279 >UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PTM2_CHIPD Length = 291 Score = 192 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 101/282 (35%), Gaps = 18/282 (6%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 + RE + + V + T + LH H YE L+L G + + GD Sbjct: 1 MKLYRENIIPSSNILVVKEEHFTVNEFPLHFHPEYELILILNGSGKRFVGNNIAEFSSGD 60 Query: 71 FVFIPLGSHHQS----FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAF- 125 F H + V ++ F + + P+ + + + ++ F Sbjct: 61 LCFFGPNLPHTYSNKHIAGPRDIHQIVVQFNEDFLGKGFFDKAPFKPIRALLDKSIRGFT 120 Query: 126 -----LTYVETVISSLNFRETGLEELVEMVTFYV-------INRLRHYREEQVIDDVPQW 173 L V +I ++ + ++++++ L D Sbjct: 121 FTGETLQEVTRMIRAMVEMDE-TAVVIQLLSVLYTLAKSAEFELLSSRGFSSKSDRAESE 179 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 V + E L + +++ S E R ++Y KT + + E+RI A K Sbjct: 180 RMGRVMDYILRNFREEIPLNVIASVACLSPEAFCRYFKKYTRKTFSEFLIEVRIGHACKL 239 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 L+ V I+ ++G+++ S F + FK +T TP Y+K Sbjct: 240 LQQQLLGVNQISMQSGFNNISYFNRKFKSMTKKTPVEYQKMF 281 >UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH72_9FIRM Length = 294 Score = 192 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 103/291 (35%), Gaps = 21/291 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGL----HQHDYYEFTLVLTGRYF 56 M P+ A E+ +N F ++I S G H H EF ++ G Sbjct: 1 MNSPL---EVSADFSERLHYNLAGFPLYIKKDKLSRYGYEALCHWHPDLEFIYIIDGAMD 57 Query: 57 QEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLLPY---- 111 ING R+ + +G +F+ H F + + + + F + + Sbjct: 58 YFINGNRIPIRQGQVIFVNSRRLHYGFSRQKEECTFIALVVHPSLFTNSFDKAWIFAEQK 117 Query: 112 -------CFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYR-- 162 + + ++ + +N L+ + H Sbjct: 118 FGFANVDYILLDSHISWQKKMIEGIDRIYREINAASFNPLRLLAEAISICADAGEHIETM 177 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 E +V Q + + + L+ + A + + ++Y +P+ + Sbjct: 178 ESSGKHNVTQMAFLNMTEYIQNNYREKLTLDKIAGAGAVCRSKSCQLFRQYVRMSPVAYL 237 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + R++ + + L T SV++IA G+ SPS +I FKK T TP +YRK Sbjct: 238 TKYRLSKSAELLRDTELSVSEIASLCGFQSPSYYINLFKKETGQTPLNYRK 288 >UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWD2_9FIRM Length = 298 Score = 192 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 93/281 (33%), Gaps = 24/281 (8%) Query: 15 REQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 RE + +NF + + + +H H+ E L+ G ++ K + G Sbjct: 13 RELEKHGTENFPMTVNHDDLWSFEGKNVPIHWHNDLEINLIREGEAVFQVYQKSYRVRTG 72 Query: 70 DFVFIPLGSHHQSFYEFGA-TRILNVGISKRF-------------FEQHYLPLLPYCFVA 115 + + H R + + F F+ C Sbjct: 73 EGFLLNRNVPHSCSSPGNEHVRYSTILVRPDFLYGDFGSDVERKCFQPFLQNSAIPCIYL 132 Query: 116 SQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLK 175 + L + V + + + E ++ + + + +++ VP L+ Sbjct: 133 TGFDENGKEILQKLNQVEEAFDRKRFCYELKIKGLLCEAFAMILYGHRQELTKFVPANLQ 192 Query: 176 S-----TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + + +L+++ S+E R ++ GKT + E R+N + Sbjct: 193 ELERLEKMLNYLNMHFTEVISLQDLADQVHLSREVCCRLFKKMTGKTITGYLEEYRVNKS 252 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 ++ YS+T I G+S+PS F F+K P Y Sbjct: 253 FSLVQSGQYSMTQITEMVGFSNPSRFASAFRKRFGCNPGEY 293 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 192 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 92/273 (33%), Gaps = 15/273 (5%) Query: 17 QQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 F+ + ++ H HD E ++L+G+ ++ G+ FI Sbjct: 22 IHQFDFAAYDADMHQFISGCIPPHWHDELEVFVLLSGQVEVVTGDISCIVNAGEGCFING 81 Query: 77 GSHHQSFYEF-GATRILNVGI--------SKRFFE-QHYLPLLP--YCFVASQVYRTNNA 124 G H G R + F+ ++ P + + FV + Sbjct: 82 GVLHTFRALSLGECRYHSFVFESSIVAGAPGSIFDTKYMKPFVEKGHSFVHMKRDEGMEP 141 Query: 125 FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVP---QWLKSTVEKM 181 F + + E + +I + D+P + + Sbjct: 142 FFEEFDRCFDACAGEGYAYEFDIRDSLTRMILCIAQNMNAPGDSDMPHLAEVRIKDMLGW 201 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 D+ E + + + R +Y PM+ + RI A + L T+ V Sbjct: 202 IDRNLKDEITVSGIAGSANICVRECQRIFSQYVHYRPMEYVQRRRITLAAELLRTTHRQV 261 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 TDIA E G+SS S FIK FK + TP YRKK Sbjct: 262 TDIALECGFSSVSYFIKQFKNIVGCTPTGYRKK 294 >UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP25_9FIRM Length = 300 Score = 192 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 90/287 (31%), Gaps = 20/287 (6%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTE-----SISGLHQHDYYEFTLVLTGRYFQEING 61 A E + Y + H H EF + +G +I Sbjct: 9 KTTTDANLMETVHHGSAEYPFRYYYENIALFDFKCIDWHWHSELEFIYIESGNVVFDIGT 68 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCF 113 L G+ + I H+ I N F +++ P++ Sbjct: 69 VHFELNEGNGIMINSKILHRLQS-SSDAIIPNFLFQPSFIAPQDSLIYKKYINPVISSSL 127 Query: 114 ---VASQVYRTNNAFLTYVETVI---SSLNFRETGLEELVEMVTFYVINRLRHYREEQVI 167 V L ++T+I + RE + V+ + ++ L + E + Sbjct: 128 EYLVFQPDIPWQKKALEIIKTIIAVQETEFNREIIVSMSVQQLWILLLENLTFDQFENMG 187 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + + + + LE++ + S+ Q TP++ + R+ Sbjct: 188 AVISRTRLQLMMQYVHAHYSENITLEDIARTANISKSTALHLFQNNLKLTPVKYLINYRL 247 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A L T + I+ G+++ F +TFKK TP YR + Sbjct: 248 TQAALLLINTEEKIATISNNTGFNNVDHFCRTFKKTYKMTPTDYRNQ 294 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 192 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 110/276 (39%), Gaps = 19/276 (6%) Query: 21 NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 F V ++ K H H+++E V G ++G++++L+ GD +F+ + + H Sbjct: 48 GDNRFSVILHPKLAIAQRYHTHEFFEIIYVYAGSCTTTVDGEQMVLKAGDLLFLNIQTGH 107 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-----------------RTNN 123 + + N+ I F EQ LL V Y + Sbjct: 108 VISVDSWDDIVFNILIKPDFLEQSLFHLLSENDVFLNFYLESLYNRTMSEKYLLFQENTD 167 Query: 124 AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD 183 + + ++ ++ +++E +++ L Q K+ V ++ Sbjct: 168 EIASTADRIVIEYLRQDPFAMKVIEAQFVTLVSLLARENRRQAPTGETIPGKAFVPEILQ 227 Query: 184 --KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 ++ + L++ + YL+ + Y GK ++II + +I A++ L+ T+ SV Sbjct: 228 WLSNHYAGATLKSTAEHFHYTTSYLSFLIKEYTGKNFLRIIQDFKIREAERYLKETSLSV 287 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 I+ + GY + F + FK T TP YR+ E Sbjct: 288 ERISDQLGYKDAAYFCRVFKNTTGATPSEYRRSQQE 323 >UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ATK5_9FLAO Length = 288 Score = 192 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 103/287 (35%), Gaps = 18/287 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 R+ + K+F + H H+ Y+ +VL G + + E G Sbjct: 1 MKQAIRKLPISKSKSFAIHELIAPHFDPHWHFHNEYQLVIVLEGTGTRFVGDDISHFEAG 60 Query: 70 DFVFIPLGSHH-------QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN 122 D V H T + + S F E +L + + R++ Sbjct: 61 DMVLTGSNLPHVWRNDETYFQGLSLVTHCIVIYFSLDFMEGEFLNKEEMKGIRELLDRSH 120 Query: 123 N------AFLTYVETVISSLNFRE-----TGLEELVEMVTFYVINRLRHYREEQVIDDVP 171 V+ ++ + + L +++ +++ + + + D Sbjct: 121 RGLEISGEIRDTVKKIMCDMLRLKGFDGVLSLLQILNILSSQKLKFINKEGYLNTVTDSD 180 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 T+ + LE + +L+ S +R + + KT + E+RI A Sbjct: 181 SKRMRTIHSYILDNFKGDIRLEEVASLANLSPTSFSRYFKSHTNKTFSNFVAELRIGAAC 240 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 K L + S+ IA E GY++ S F K FK+LT+ +P YRK+ + Sbjct: 241 KLLHSNDLSILGIAHECGYNTLSNFNKKFKELTNDSPLRYRKRYQKI 287 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 98/287 (34%), Gaps = 22/287 (7%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEING 61 E + ++ Y + H H +EF V +G I Sbjct: 9 KILTDEEFMEIKQHGSSDYPFQYYYDNLELFDFHCIEWHWHREFEFLYVESGEVTCGIGE 68 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCF 113 K+++L G+ +FI H+ + G I N F +++ LP++ Sbjct: 69 KQIILSEGEAIFINSKILHRFYAPSGG-IIPNFVCMPEFIAPENSLIYKKYILPIISSNI 127 Query: 114 VASQVYRTNNAFLTYVETVIS--SLNFRETGLEELVEMVTFYVINRLRHYRE------EQ 165 + ++T+I + E E + + + Q Sbjct: 128 YFQRFQTDELWQTKIIQTMIKIMEIQGNEKIRELATLALMQDLWLTFYENVKLSDKGDVQ 187 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 +D+V Q + + + +L+ + + S+ R+ TP+ + Sbjct: 188 TVDEVAQKRVQLIMQYIHENYNHNLSLDEIASHIGISKSTALNLFHRFLHTTPVNYLIGY 247 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 R+ A L+ TN V IA+E+G+ + F + FKK TP YR Sbjct: 248 RLQAASWLLKNTNKKVKTIAYESGFHNVDYFCRLFKKRYHLTPSEYR 294 >UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NUZ5_BACSE Length = 305 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 91/276 (32%), Gaps = 20/276 (7%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 Y+ H H YE V + GD V H Sbjct: 30 SNPIKARYYDYDRFTYPWHFHSQYEIIYVKKSCGRCFVGDCIECFSEGDVVLFGPSLPHY 89 Query: 82 SFYEF---GATRIL-----NVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY----- 128 + G L + + F + + + + + + + Sbjct: 90 MRSDDAYHGDNPRLRVQGTIIQFEENFMQYSFDHYPQFHQIRVLLKEARRGVVFHTADAG 149 Query: 129 -VETVISSLNF-----RETGLEELVEMVTFYV-INRLRHYREEQVIDDVPQWLKSTVEKM 181 V ++S+ + TGL +L++ + V L + + Sbjct: 150 AVRDMVSAFPELKGFGQITGLLDLLQALAVSVPRRMLASPCYYEKFPTAGNKRIDKIISF 209 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + L+ + ++ + R + GKT +Q + ++RI +A K L + + + Sbjct: 210 INSNYTRSLKLDEIAEMANMNSSAFCRFFKDATGKTFLQYVADMRIGYACKLLTIGDMEI 269 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + IA E G+ S F +TFK+LT TP YR ++ + Sbjct: 270 SQIAVECGFDSIPHFNRTFKQLTGLTPTQYRNQIMK 305 >UniRef50_C0EIV3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIV3_9CLOT Length = 307 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 106/272 (38%), Gaps = 12/272 (4%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 + E + + N+ ++ + H H+ E L+ TG +N + ++GD Sbjct: 1 MKAFHEVRSYRS-NYSLWHSTYQDISFLAHWHNEIELILLRTGSSSISVNDRTFEAQQGD 59 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS----QVYRTNNAFL 126 + G H S I + Q+Y LL + Q +R Sbjct: 60 LIICNSGDIHYSDAANQQNTIDFIVFDPALLGQNYPSLLCPQHLIPGGFLQEHRLIAPLD 119 Query: 127 TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK------ 180 +ET+ + L+ ++ +E++ RLR ++ D Q +S Sbjct: 120 HLIETIDAELDEKQLYYQEIITAALREFWFRLRRCIPDEPSDVHLQGQRSEFLYAFHQLL 179 Query: 181 -MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 ++ + LE ++ S Y ++ +R G + +N +RI A L+ ++ Sbjct: 180 GFLEEHFSEDIPLETAASMIGYSTGYFSKTFKRLIGINYITYLNMLRIEHAVSCLQSSSD 239 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 + DIA + G+ + F +TF+++T ++P + Sbjct: 240 KIIDIALQCGFHNIRTFNRTFREITGYSPTEF 271 >UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZFS6_EUBR3 Length = 293 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 99/289 (34%), Gaps = 20/289 (6%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGL----HQHDYYEFTLVLTGRYFQEINGK 62 N P +E F V Y + H HD E TL+ G +I+ Sbjct: 4 NNPPALGQKENAKHGEVFFPVQKYITRLAADYPVITTHWHDEAELTLITKGSCTYQIDLL 63 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFGA-----TRILNVGI---------SKRFFEQHYLPL 108 + GD +FIP H T + ++ S R+ Sbjct: 64 EYEAKEGDIIFIPPLLLHSISIRDCDEFYSETYVFHINFLGGNNTDICSSRYLTPLINHE 123 Query: 109 LPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVI- 167 ++ + + ++ + + + +E E ++ I L Y E+ Sbjct: 124 FAMPYLIAPKHPAYSSLCKCFMRITNLYSRQEFAYELALKAFLLQAIFLLLQYSEKNADF 183 Query: 168 -DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 + V D + + L S+ + R +++ T +Q IN +R Sbjct: 184 GVNTSSDKLKNVLDYIDVHYAESIQVAELAGLCYFSEYHFMRFFKKHMNMTCVQYINNVR 243 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + + +Q E N S+ D++ G+ + S F + FKK TP S+ K L Sbjct: 244 LEKSVEQFERGNTSILDVSLSVGFHNLSYFHRAFKKRYHMTPLSFIKSL 292 >UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969E72 Length = 291 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 102/272 (37%), Gaps = 18/272 (6%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 E++ F +N H+ + GLHQ +E + V+ G + I G+ V IP Sbjct: 5 ERRSFTFENVHLA----PDEQIGLHQQSTWELSYVIVGSGMRLIGDMTEPFLGGEVVMIP 60 Query: 76 LGSHHQSFYEFGATRI------LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL--- 126 H ++E T + V F ++ C ++ + +A Sbjct: 61 PEIPHCWYFEDDDTDEQGRIANITVTFDNDFLDRCSGTFPELCGHIDKLKKKYDAVKFDK 120 Query: 127 ---TYVETVISSLNFRETGLE--ELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 + ++ + + +++++ + H + D + ++ Sbjct: 121 EKSEAIIDLLEEMCNQSEAERVASMIKLILIMADSGSEHVVGKYQRIDKETKRMNQIQTY 180 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + L+++ ++ ++ GKT + +NE RI A + L+ +V Sbjct: 181 VICNAKRDITLDDVARYVGMNRASFCIFFKKATGKTFVTYLNEYRIGLACQLLKQKRMTV 240 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 ++I + G+++ F +TFK+ +P Y++ Sbjct: 241 SEICYNVGFNNVPYFNRTFKRHKGVSPCEYKQ 272 >UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR68_9FIRM Length = 301 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 93/289 (32%), Gaps = 22/289 (7%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEING 61 T RE + + Y + H H EF V G + G Sbjct: 9 RIITDETLRETASHGSEEYPFCYYYEDIWDFDFHCIDWHWHPEVEFVYVQQGMADFLVGG 68 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCF 113 R +L GD +FI H+ F + I N+ S ++ P++ Sbjct: 69 NRYVLSSGDGIFINSQVIHR-FEATDSAIIPNIVFSPVLLAPQGSLIYSRYIRPIIESTT 127 Query: 114 VASQVYRTNNAFLTYVETVISSLNFRETGLEELVE--------MVTFYVINRLRHYREEQ 165 A + +ET+ S + +G ++ Y + Sbjct: 128 ECVIFSAEETAHRSIIETMRSVFAVQGSGTASEMKTAELLLKLWRLLYESILITDCGSMS 187 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 V Q + + + L+++ S+ + + Y +P+ + E Sbjct: 188 VHSAQTQAKLQIMMQYIHDNYSGQITLDDIARTVLISKSSVLNIFRTYLHTSPINYVVEY 247 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 R+ A K L T SV IA E G+ + F + FKKL TP YR Sbjct: 248 RLKCASKLLVDTENSVCTIAHETGFENIGYFCRRFKKLYGVTPIYYRNH 296 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 19/261 (7%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL 92 ++ LH HD + ++V G + K +L+ G +FI H + I Sbjct: 36 SKGYVKLHWHDEIQISIVTKGSVEFIVGEKSYILKNGQAIFINTQRIHMAKSVGDEDCIY 95 Query: 93 NV---------GISKRFFEQHYLPLLPYCFVASQVY-----RTNNAFLTYVETVISSLNF 138 + EQ Y+ + + + L Y+ +I+ Sbjct: 96 HAIMFNAKLLKMFPGSIIEQKYIDPVITSNKLNSIEIYGNNNWEQDALKYISDIINVDII 155 Query: 139 RETGLEELVEMVTFYVINRLR-----HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALE 193 ++ G E + + L + ++ + + V + ++ L+ Sbjct: 156 QDKGYELKIYIDLLNFWLLLVLNDKDIFNQKMEPKPINEQRIKDVLSFIHQNYSNKITLQ 215 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 ++ S+ R ++ +P + RIN + K L+ ++ S+ DI+ G+++ Sbjct: 216 DIADAVFVSKGECCRFFKKSLKMSPYDYLINYRINESMKLLKNSSLSILDISENVGFNNV 275 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 S +I+ FKK T TP YR Sbjct: 276 SHYIQIFKKKTGQTPLEYRNS 296 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 108/264 (40%), Gaps = 7/264 (2%) Query: 19 LFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 + G + +E++ H H YYE + G ++ + E G+ + P S Sbjct: 9 IEQGADIAAERVRSSENMMKSHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYS 68 Query: 79 HHQSFYEFGA--TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSL 136 H S+ + + V +++ L L+ A +Y + + ++ + Sbjct: 69 MHHSYAPSEDQAFQRIVVYFTEKAIGD--LTLIEKMRHAGGLYHPDRRMSHQIHGLLGMM 126 Query: 137 NFRETGLEELVEMVTFYVINRLRHYREE---QVIDDVPQWLKSTVEKMHDKEQFSESALE 193 ++ ++L ++ ++ + + + V + V + + L+ Sbjct: 127 LMEQSETDDLHDITMETILRAILLLLLKDVRTLNPTVNKSRVIKVIEYISDHYMEDLRLD 186 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + SQ YL R ++Y +T Q IN RI A++++ TN+ + +A G++S Sbjct: 187 ELAGRFYVSQYYLCREFKKYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASS 246 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTE 277 + F + F+ +T TP ++RK ++ Sbjct: 247 THFSRVFRSVTGMTPTAFRKSCSQ 270 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 105/280 (37%), Gaps = 20/280 (7%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 RE F K + + G HQHD+ EF V++G E N + + +GD + + Sbjct: 12 RESGDFRPKIMAYYYKQWEDFHMGFHQHDWTEFMYVISGNCTVETNKDVIAMRKGDLIML 71 Query: 75 PLGSHHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCFVASQV------------YRT 121 G H+ E G R+LNV + + Y + R Sbjct: 72 DAGVPHRLIVESGSPCRMLNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRD 131 Query: 122 NNAFLTYVETVISSL----NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST 177 + ++ L +E G E + ++ ++ R+ + + + + Sbjct: 132 YEDIQVNLRNLVFELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHY 191 Query: 178 VEK---MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 V + + + +++ A YL R + KT + + ++R++ AK L Sbjct: 192 VRQATEYIHQYYDTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLL 251 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 T+ + ++A G +S F FKK+T +P YRK Sbjct: 252 ARTDVPIIEVADHIGLNSRQYFSMLFKKMTGISPAEYRKS 291 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 88/285 (30%), Gaps = 28/285 (9%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 E + + F + T + LH+HD +E V+ G + GD Sbjct: 8 YELPEVENHSF--FFIDQRVTTSIEAKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGDV 65 Query: 72 VFIPLGSHHQSFYEFGA------TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAF 125 IP H Y + R L V S E+ + + NA Sbjct: 66 ALIPPSMLHHWEYSPDSADDDGYVRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNAL 125 Query: 126 L------TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID--------DVP 171 + ++S +N + + L + Sbjct: 126 KFGTGSSQTIRRILSQMNDMDE------LGRLCEMFRLLPAIFTSSDHTFAGKPMNIERD 179 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + +L+++ A ++ +R G T Q + + R+N A Sbjct: 180 VRRMQQICVYVMTHYIHTISLDDIAAEVGMNRSAFCSYFKRCKGMTFSQYVTQYRLNTAC 239 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + L+ + V++I F G++ F++ FK +P YR++ Sbjct: 240 ELLKHSQKQVSEICFTVGFNDLPHFVRVFKNTLGMSPSKYRRRFQ 284 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 94/257 (36%), Gaps = 9/257 (3%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + Y S H HD+ E V++G L+ +F I H + Sbjct: 17 IYCDRYEDYRQFSPRHWHDHIEIIYVVSGSLQVVCGENEYTLKENEFFVINSNKIHGTQS 76 Query: 85 EFGATRILNVGISKRFFEQHYLPL----LPYCFVASQVYRTNNAFLTYVETVISSLNFRE 140 + R+L V I + + + C+ R + ++++ + Sbjct: 77 -YERVRVLLVQIPYAYLDSYIDDYGQIRFRECYETENGSRKYEQMKSLLKSIAHIYRKKG 135 Query: 141 TGLEEL----VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 G E V + + + + V + K AL+ Sbjct: 136 KGYELRLMAKVNEFLYILFTNYSYKEMNAGKESRQIARLKDVLRYVAKNYQEPIALKEAA 195 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 +++ +Q+Y R ++ G T ++ +N++RIN ++L T S+TDI G+++ +F Sbjct: 196 DIASLNQDYFCRMFKKCMGVTFLEYVNQVRINHIHEELLATEDSITDILEHNGFTNYKVF 255 Query: 257 IKTFKKLTSFTPKSYRK 273 + FK TP+ RK Sbjct: 256 SRMFKAQFGMTPRELRK 272 >UniRef50_C0D5Z0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5Z0_9CLOT Length = 334 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 98/267 (36%), Gaps = 11/267 (4%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 N + Y + H E LVL G+ L+ D + I H S Sbjct: 30 NILLESYAYEVGFFRFNWHPSLEIMLVLEGKLTAYSEQGVFELQEDDLLVINPNIGHASM 89 Query: 84 YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVET----VISSLNFR 139 + T L + IS+ + EQ + +FL + + ++L+ + Sbjct: 90 LQSPRTVALVIHISQSYLEQLCGNAAIPNLTCYSASEADRSFLKPLRAGIAAIYTTLSEK 149 Query: 140 ETGLEELVEMVTFYVINRLRHYR-------EEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 + + +++ L Y +EQ Q L T+ K + + L Sbjct: 150 SQTGRLFTQSQIYALLSFLLRYNADNDLRPKEQRQKAEQQKLIHTMIKYINHHFRDKVTL 209 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + LS + Y++ + + G + R+ +A Q+ T S+ DIA ++G+ Sbjct: 210 SQLAELSGMNLCYVSTFFKAHTGVGFQDYLTRKRLAYAAYQINNTEDSIVDIAMDSGFPD 269 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTEFN 279 F + F+K + +P YR +L++ Sbjct: 270 VKAFNQAFRKYFNLSPGQYRSELSKKE 296 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 96/272 (35%), Gaps = 12/272 (4%) Query: 18 QLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 V + + H H+ E L G I + + L+R + Sbjct: 10 HPLGNLGIQVSMAALENTHIPAHWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSK 69 Query: 78 SHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE------T 131 H + L + + K+ + L Y V ++ Y+ Sbjct: 70 EVHSIHSDSKLYMFLCIHVDKKQLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHD 129 Query: 132 VISSLNFRETGLEELVEMVTFYVINRLRHYRE------EQVIDDVPQWLKSTVEKMHDKE 185 + + + + ++ L Y + + ++ Sbjct: 130 LTRTNVENKNTSAMRSDGTALLMLADLIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEH 189 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + +LE + S+EY R +++ G T ++ +NE+RI+ A + L T+ S++++ Sbjct: 190 YTEKLSLEEVANQVGFSREYFCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVM 249 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 E+G+++ ++F + FK++ TP+ R E Sbjct: 250 QESGFTNQTIFNRLFKEIYGMTPRQARNSYAE 281 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 12/261 (4%) Query: 26 HVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 V +++ LH H++YE + V+ G +NG L G + H+ Sbjct: 21 PVQVFHGIHPGTIPLHWHEFYELSYVVGGEGEHRLNGSAYPLSSGTLFLLTPADFHELVS 80 Query: 85 -EFGATRILNVGISKRFFE-QHYLPLLPYCFVASQVYRT--NNAFLTYVETVISSLNFRE 140 E I NV ++ + Y L V + E + Sbjct: 81 VEDKPLEIYNVIFTEAMMDDNLYHWLFGGKLVLHAQLEEMQHRQIFADYERMREETGASR 140 Query: 141 TGLEELVEMVTFYVINRLRH-------YREEQVIDDVPQWLKSTVEKMHDKEQFSESALE 193 G E + ++ L + + LE Sbjct: 141 EGSEIAIRATLQRLLVDLNRGSTANCALPTNGTGNRQLNVNLQRALIYIHHHFREDLRLE 200 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + A + S Y + + G++ + + +R+ FA+ L +++ VT+I + +G+++ Sbjct: 201 DAAAQAQYSATYFSECFSKSVGQSFQRYLQNVRMQFAESLLRVSSLPVTEICYASGFNTL 260 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 F + F++ +P+ YR Sbjct: 261 GHFERVFRQRKGMSPRQYRHH 281 >UniRef50_Q9S309 Putative AraC-type Regulator n=1 Tax=Ruminococcus flavefaciens RepID=Q9S309_RUMFL Length = 282 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 105/281 (37%), Gaps = 17/281 (6%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 ++ E + + F + N H H+ E + L + G L Sbjct: 1 MIKNLSGDYETVEYENQRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVTAGGVDYHL 60 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFE-----QHYLPLLPYCFVASQVYRT 121 + + IP G H + G R + + +P+ F + Sbjct: 61 NEKEIIIIPPGELHSMPAQEG--RRIIFQCDNSIISDVPALEAIVPVFSEAFHITPTISK 118 Query: 122 NNAFLTY--VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID--------DVP 171 L+ + + S + + + + + ++ +R Y+ Q D Sbjct: 119 ELYILSRKSILDIYSEYYSKSSLSDVRIYLCLIKMLTSVREYQLTQAADAFSGELGGRDD 178 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 S V K ++ E LE + +++ S+ + +R ++Y + +Q IN RI A+ Sbjct: 179 TRKFSMVMKYINQNYMYEIPLEKIASIAGYSKYHFSRIFKKYNNVSYIQYINSKRIKAAE 238 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + L N SVT++A AG++S + F + FKK + TP ++ Sbjct: 239 RLLIDPNLSVTEVAMRAGFASLTTFNRAFKKAKNCTPTEFQ 279 >UniRef50_C6CWW3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWW3_PAESJ Length = 293 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 108/283 (38%), Gaps = 19/283 (6%) Query: 16 EQQLFNGKNFHVFIY---NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFV 72 E+ ++ + ++ K + + H H E ++ GR ++ + LE GD + Sbjct: 11 EKVVYENPLLSLRVWQPIRKDDDFTNWHYHRQLELLYIIKGRLDVDVEEESYHLEPGDII 70 Query: 73 FIPLGSHHQSFYEFGATRILNVGISKR------------FFEQHYLPLLPYCFVASQVYR 120 I H+ G + + +F + PL ++ + + Sbjct: 71 MIGASQLHRDKSV-GHLDYIVLQFELEPFFDQSTIAYMRYFSETENPLSMANYIFQENGK 129 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ---VIDDVPQWLKST 177 Y+ + +ETG E V ++ ++ L + DD + Sbjct: 130 VKKQIGDYIRQLHHEAERKETGYEIAVSVLIKQILLTLLRNDNRKMLAEQDDFDRLRLKP 189 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 V + +E + ++ S Y + ++ G + + +N +I +A++ L Sbjct: 190 VLDYVENRLTDRIQVEEVCRIANMSYYYFVKFFKKTIGMSFTEFVNYRKIKWAERILLTK 249 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 + S+T++ G + + F K FKK +PK +++K+ ++N+ Sbjct: 250 DLSITEVGERIGMPNMAHFYKMFKKYNDCSPKQFQRKMLDWNR 292 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 10/255 (3%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF-GA 88 + + + S H H + E V G I + +++ D + + H Sbjct: 27 HYEEDWPSIPHTHAFTELFYVSEGSGEFLIENQHFSIKKDDLIIVNPHIQHTEISLSASP 86 Query: 89 TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE 148 VG+ F H F ++ + L Y ++ L+ + G EE+ + Sbjct: 87 LSYYTVGVDGISFSFH----DQKEFQIFHYHQKHADLLFYFHSLFQELDEKNDGYEEICK 142 Query: 149 MVTFYVINRLRHYREEQVI---DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 +I++LR + P + V++ D + LE + +LS ++ Y Sbjct: 143 HTLAILISQLRRFAVSDFQLFPSFHPSKECALVKRYLDSHYSDDINLEQLASLSHLNKYY 202 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L+ RYYG +P+ + RI K LE T++ ++DIA AG+SS S ++F+K Sbjct: 203 LSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAHLAGFSSQSYLAQSFRKYCG 262 Query: 266 FTPKSYRKKLTEFNQ 280 T YR+ + NQ Sbjct: 263 MTAGEYRRS--KKNQ 275 >UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enterococcus casseliflavus RepID=C9A5Y7_ENTCA Length = 279 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 87/280 (31%), Gaps = 7/280 (2%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRYFQEIN 60 + E N IY K LH HD + V G + I+ Sbjct: 1 MYFKRTKENEETTKHTTTNRSFAIYQRCLQQKRGDQLPLHWHDELQIVWVEEGSFVYTID 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 +++LL + + + I H + R S F V + Sbjct: 61 DEQILLNKNETIIINSRVLHGAVLASENVRYCCFDFSSGFIADPVFKEAIEQLVHDRTRS 120 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 LT +E+ + + L + + + + Sbjct: 121 YRRLTLTAQHQAFVQTVRLPLLIEQRFTLY-ELFLAALSQLMAARPASPKKETIY-LMLA 178 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + + + +A + T ++Y TP+ + + R++ AK L T Sbjct: 179 FVHEHYQEPLTVPAIAKAAAINTRTCTALFRQYTTLTPINYLIDYRLSQAKNLLIETEEP 238 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 ++ I + G++ S F K F++ TP YRK E ++ Sbjct: 239 ISTICYHVGFNHLSYFSKRFQRKFGLTPLQYRKTYREDDR 278 >UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGE3_9CLOT Length = 371 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 99/256 (38%), Gaps = 19/256 (7%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 LH H+++E V +G + +G+ L +G H + ++N+ + Sbjct: 107 HLHTHEFFELIYVYSGTCYCNFSGEEFCLSKGTIWIFNTQCAHSVVIPDDGSTLVNILLR 166 Query: 98 KRFFEQHYLPLLPYC-----FVASQVYRTN-------------NAFLTYVETVISSLNFR 139 K F L ++ F +Y N + Y+ +I + Sbjct: 167 KSTFSSAILNMIQDNDLFLDFFLKSIYDANTQPHHMQFQAQPGSEIEFYIFKIILEYANQ 226 Query: 140 ETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-HDKEQFSESALENMVAL 198 + +++++ ++ L + + + + + + + +++ L++ Sbjct: 227 SNYRQSIMKLMLSTLLTELARDYQLRSETEDKTASIDILNIIAYISDHYTDVTLKSTAEH 286 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S +Y+++ +Y G + ++ + +++ A+ L T + +A GYS S F + Sbjct: 287 FHYSPDYISKCIYKYTGYSFLEYMKRYKLSKAEYLLLHTKLPLEQVASMVGYSQRSSFDR 346 Query: 259 TFKKLTSFTPKSYRKK 274 FKK S TP YR + Sbjct: 347 EFKKHYSLTPSRYRSQ 362 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 102/266 (38%), Gaps = 12/266 (4%) Query: 18 QLFNGKNFHVF-IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 + FN + + F +N+ H H++ E +++L G + G++ G Sbjct: 7 RTFNPEILYAFDPWNEETHPYNCHHHEFLEISILLEGESEYIVQGQQYHATAGTVFLFNP 66 Query: 77 GSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISS 135 + H + G + L++GIS + E + P + + AFL ++ Sbjct: 67 RTEHGEQQKAGTYSHQLHIGISNLYLEGLARNVFPNKSALLDLSHLHGAFLEKAWQIVHE 126 Query: 136 LNFRETGLEELVEMVTFYVINRLRHY----------REEQVIDDVPQWLKSTVEKMHDKE 185 LN +E ++ + ++ + + + L + + Sbjct: 127 LNHQEVESALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTIYYLETH 186 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 E LE + + + YL++ + G P+ + +IR+N AK+ L+ + SV ++A Sbjct: 187 HDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKEVA 246 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSY 271 GY F K FKK +P + Sbjct: 247 KTVGYEDAYHFSKLFKKYYGKSPSQF 272 >UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQ90_9FIRM Length = 295 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 94/254 (37%), Gaps = 17/254 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISK 98 H HD EF +L G+ I K + RGDF+ I + +S R + I Sbjct: 42 HWHDELEFIYILDGKMDFHIEEKILTASRGDFLAIHASAMRRSAPHNGEDCRFIRALIHP 101 Query: 99 RFFEQH-------YLPLLPY----CFVASQVYRTNNAFLTYVETVISSLNFRETGLEELV 147 ++ PLL CF+ + + G E Sbjct: 102 SLLTENQSVRNRLLSPLLGNTSRRCFLVPSASPDAPRRGELLREINRINEKHLPGFELES 161 Query: 148 EMVTFYVINRLR-----HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 + ++ RL + ++ + + + + +L + A + S Sbjct: 162 IGLLHILLARLYALFPPEKQTQEDMPGTDISAQRRMVAYISHHYPEKISLAGIAAAGSVS 221 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + + ++Y ++P+ +N R+ ++ L+ T S+ +IA G+SS S + K F + Sbjct: 222 RSKCCQLFKKYMQQSPIDFLNRYRLEISRNLLDSTENSILEIANACGFSSQSYYTKMFSE 281 Query: 263 LTSFTPKSYRKKLT 276 + TP YR +L+ Sbjct: 282 KFNCTPTQYRSRLS 295 >UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRP4_9SPHI Length = 290 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 105/283 (37%), Gaps = 21/283 (7%) Query: 11 IATAREQQLFNG-KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 + E+ +F+ + V + + H H YE T ++ + + + G Sbjct: 1 MKALFEKLVFSEQSSLLVRRFQIPYFDAPWHYHPEYELTYIVKSHGRRFVGDHVDSFQAG 60 Query: 70 DFVFIPLGSHHQSFYEFGATRI--------LNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 D V + H + + + V F E+ + V + R+ Sbjct: 61 DLVLLGPDLPHFWRNDDDYYQAGSVQKAVSIVVQFPATFPERGLATVPEAESVRKLLERS 120 Query: 122 NN--AFLTYVETVISSLNFRETGLEELVEMV-TFYVINRLRHYREEQVIDDV-------- 170 F + +S L + L +++ ++N L +E ++ Sbjct: 121 RYGLRFSQAMSQSVSELLEQLPQQTGLPQLLGLLTILNELATDQEAYLLASDGYQLAPGA 180 Query: 171 -PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V + E +E++ +++ + R + KT ++ +NE+RI Sbjct: 181 AETERMKRVLEFVLLHFREEIRIESIASIAGMAPAAFCRYFKNRTRKTFVEYLNELRIGH 240 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A+K L T+ S++ ++ + GY++ S F + FK TS TP Y+ Sbjct: 241 ARKLLTTTDLSISQVSLDCGYNNSSHFHRQFKLYTSITPFQYQ 283 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 11/262 (4%) Query: 22 GKNFHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 + + ++ + GLH+HD +E + G IN + RGD + H Sbjct: 11 SPDLPLAVWPVQKAGAIGLHRHDCFELVFITRGTGLCRINDLSYPVLRGDVYILNPHDTH 70 Query: 81 QSFYEFGATRILNVGISKRFF--EQHYLPLLPY------CFVASQVYRTNNAFLTYVETV 132 + + N+ + E PLL + +A + + Sbjct: 71 C-YEMASSCTFYNILFRRELLQHEPALTPLLDDWESRTDRKLYQLENDETDAEEFRFQEI 129 Query: 133 ISSLNFRETGLEELVEMVT-FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESA 191 I L R G E V + +++ LR E+ I + S V + + S + Sbjct: 130 IVELKKRLPGYEAAVRALFAVFLVRLLRRGNCERHIPPGHRPSASKVFEYINAHLGSTIS 189 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L + ++ S A +++ G + I +RI A++ LE ++ +IA G+ Sbjct: 190 LRELAGVAGMSTPAFAGAFRQWTGNSVPGHIGALRIRQARRLLEERKLTIGEIALRLGFY 249 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 F + F+K T +P+ YR+ Sbjct: 250 DTCHFSRVFRKKTGLSPREYRQ 271 >UniRef50_C0EH74 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EH74_9CLOT Length = 302 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 93/271 (34%), Gaps = 11/271 (4%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 + E++ ++ N V+ S H H E + G IN + GD Sbjct: 1 MEAFYEKRRYDT-NLRVWTCCYNGLTSLPHYHREIELLYIRQGCAHVGINSQSYTCYGGD 59 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE 130 V G H S E + + E Y V + V+ Sbjct: 60 LVISQTGDMHYSNSENEDNILDFIVFEPSVLETVYSNDRSLQSVLTAKELKKTGMDEIVQ 119 Query: 131 TVIS----SLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWL------KSTVEK 180 + S L +E + L+++ + Y + + Q + + Sbjct: 120 RMYSTVHSELKNQEMDFDTLIKLTLSEFWVKYTRYFGQTRTAEDRQPMVTALAKLQKLMD 179 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + ++ +L + + + ++ ++ G + +N +++ A + + + YS Sbjct: 180 YIEDNFANDISLSDAAEIMGYEVCHCSKVFKKLTGVNFTEYLNNVKVGKAIEMIRKSEYS 239 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 +TDIA G+++ F + FK +T TP + Sbjct: 240 ITDIAMRCGFNNIRTFNRVFKSITKMTPTHF 270 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 103/285 (36%), Gaps = 27/285 (9%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 T + + + FH N H H E + +T Y ++ K+ +L+ G Sbjct: 8 MTETINYRNSMDFRLFH----NVDYEDYPTHWHVGIEILMPVTEIYGVIVDQKKYVLQEG 63 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFF-----EQHYLPLLPYCFVASQVYRTN-- 122 D + + G H RI+ + + L L P F + + Sbjct: 64 DILIVNSGVPHALEAPPTGERII-LQFDPALLYSLKEMETLLLLFPPVFYITPENEPDLY 122 Query: 123 NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVID-----------DVP 171 +E +I + ++ LV + + E+ I+ Sbjct: 123 PLVKAKMEEIIREYDGQQAFAGALVYASLIELFAGVGRITRERNIEGTALHDMRRSKQDR 182 Query: 172 QWLKSTVE----KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 QW V ++ + LE + S+ + TR ++Y T + +N+ R+ Sbjct: 183 QWEYQEVALKACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFYEYLNKKRV 242 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A+ L T S+TD+A +G+SS S F +TFK L +P +R Sbjct: 243 KCAEGLLYSTEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVW1_PAESJ Length = 294 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 104/294 (35%), Gaps = 26/294 (8%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTES--------ISGLHQHDYYEFTLVLTGRYFQEING 61 E F + F +Y T + LH H+ + TL G +ING Sbjct: 1 MGKQLYEAIRFPDETFPYIMYTHTIHRSIPEGRGFNDLHWHEELQITLATKGNLTIQING 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPLLPYC 112 L G +FI H ++ ++ + + LP Sbjct: 61 IDYRLHTGQAIFINKSVLHIVTDLTAEGEYVSFNFPEKLLAFYSDSAMEKNYVLPFTNSY 120 Query: 113 FVASQV---YRTNNAFLTYVETVISSLNFRET---GLEELVE---MVTFYVINRLRHYRE 163 ++ ++ L + ++ +++ E ++ + + N E Sbjct: 121 LLSFEIKGDTEWQKQILNILWSMKKEFEIKKSWGWQYEISIKTVQLWLILISNISLPSEE 180 Query: 164 EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 + + Q + + + L+ + + S TR+ + TP + Sbjct: 181 SSKHNRLKQERLQLMLSFIHQNYSNPITLKEIADAAHLSVSECTRSFKTSIRMTPYSYLV 240 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + RIN + + L+ T Y++T+IA G++ + FI+ FKK TPK +RK TE Sbjct: 241 KYRINKSCELLQSTEYTITEIASRVGFNQVNHFIQAFKKDLKLTPKEFRKNRTE 294 >UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides RepID=C3QPX4_9BACE Length = 325 Score = 189 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 86/273 (31%), Gaps = 25/273 (9%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 Y H H YE V G + + +GD + H Sbjct: 52 RFYEYPRFTYPWHFHSEYEIIYVEKGEGDCLVGDSIISYSKGDLILFGSELPHSMQSPPD 111 Query: 88 -------------ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE---- 130 R +N+ K F + + + + + Sbjct: 112 GGEESDNEEKSELKVRGVNIQFEKDFMHYSISQYSQFIPIRNLLEDACRGIKFTITRSGK 171 Query: 131 --TVISSLNFRETGLEELVEMVTFYVIN------RLRHYREEQVIDDVPQWLKSTVEKMH 182 ++ + + + ++ + ++ L + V Sbjct: 172 IIKLLKQIPSAKGVDQIILLLSLLQMMATSNHRKYLTTSHYTPSPSIMRNERMEKVIAYL 231 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +K L+ + + +A + R + GKT + + ++RI +A K L + +++ Sbjct: 232 NKHYTESIGLDEIASYTAMNPTAFCRYFKENTGKTFKEYVLDMRIGYACKLLNSSMMNIS 291 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 I+ G+ SP F + FK++T TP YR+++ Sbjct: 292 QISATCGFESPVHFNRIFKRVTGMTPTFYREQM 324 >UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIK7_9CLOT Length = 343 Score = 189 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 100/274 (36%), Gaps = 21/274 (7%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 H + Y S H HD++E + V G+++ + + + + V + + H + Sbjct: 62 LHDYRYVHFGPPSHPHNHDFFEMSYVYKGQFYNRVENQDIEQKENTLVLLSPRAVHSCYI 121 Query: 85 EFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVYRTNN-----------AFLTY 128 + N+ I + E+ +L + F +Y + ++ Sbjct: 122 REKTDIVFNILIKRSLVEKIFLRMFSEESAVSRFFLDSIYNIHQKKPYLVFHCNEELVSL 181 Query: 129 VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVP----QWLKSTVEKMHDK 184 V +I ++ + ++ + + L + + + P S + + Sbjct: 182 VHGIIREHFDQKLFSQNMIIAKLIELFSELSRLFQITLQGESPLPETSSNISEILDYIEN 241 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 S L ++ S Y++R + + ++ I++ ++ A + L ++ V + Sbjct: 242 NYSS-VTLTSVAEHFNYSPSYVSRIIKTHLNQSFASIVHNKKLENACRYLSASDLPVEQV 300 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 GYS S F K FK+ +P+ YR + + Sbjct: 301 IEIVGYSDVSHFYKIFKQKYGLSPRQYRTQSNKL 334 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 189 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 116/284 (40%), Gaps = 20/284 (7%) Query: 13 TAREQQLFNGKNFHV---FIYNKTESISGLHQHDYYEFTLVLTGRYF-QEINGKRVLLER 68 + + + N N + F + + H H+ E + VL+G+ I+G E+ Sbjct: 2 EYKYELIKNDDNLPIKIIFHTSDDAQLVPRHWHESIEISYVLSGKIDDIYIDGIHYTSEQ 61 Query: 69 GDFVFIPLGSHHQSFYEFGATR-ILNVGISKRFFEQHYLPLLPYCFVASQVYRTN----- 122 GD V I + H G R + IS F + +Y + F + + + Sbjct: 62 GDIVLINSNAIHSFSVVQGKNRKAVTFFISYEFLKTNYPDIDQIAFDCVSIDQNDEHKIK 121 Query: 123 --NAFLTYVETVISSLNFRETGLEELVEM------VTFYVINRLRHYREE--QVIDDVPQ 172 N ++++I + + +++ + + ++ + ++ ++ Sbjct: 122 IFNELRENLDSIIRAFSNLRDDSLAHIKVIGLSYELIYLLLKNFKISKKSFGEIKTKKYL 181 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 + + + + +++ + A S EYL+R ++Y G T IN +R+ + + Sbjct: 182 DRLTEITNYIKENYSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYR 241 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 L T+ S+T+IA E G+ + F K FK + TP YRKK+ Sbjct: 242 DLMNTDQSITEIALEHGFPNEKSFNKVFKTFYNITPNQYRKKIK 285 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 5/246 (2%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATR 90 E S LH H Y E V G ++ K ++ D V + H Sbjct: 42 DHEWNSTLHTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLISHTERGIENVNFE 101 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMV 150 + +GI + C +A+ Y + L Y++T++ + ++T + L + + Sbjct: 102 YIVMGIEGVTYFSKEEDEEQGCSIAN-YYEYKHEVLFYLKTILFEVKTKDTEYQSLCQNL 160 Query: 151 TFYVINRLRHYREEQVIDDVPQWLKST---VEKMHDKEQFSESALENMVALSAKSQEYLT 207 ++ L + +EK D + L+ + L+ ++ ++ Sbjct: 161 LEVLLINLMRRANINLKSSPINKANKDCVLIEKYIDAHFKEDITLDTLSELTFLNKYHIV 220 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 A ++Y G +P+ + + R+ AK L TN +++IA+ G++S S F + FKK T + Sbjct: 221 HAFKQYKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQSYFAQAFKKATLTS 280 Query: 268 PKSYRK 273 P YRK Sbjct: 281 PLQYRK 286 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 86/249 (34%), Gaps = 14/249 (5%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI-----LNV 94 H HD YE + +G ++ + G V IP G H++ Y L Sbjct: 26 HSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQRTALRF 85 Query: 95 GISK-----RFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEM 149 I + ++ + + + +I + +V+ Sbjct: 86 SIKDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYIENLITRMIYENQMPDELSMGMVKT 145 Query: 150 VTFYVINRLRHYR----EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 + + + + D V + L+++ + S+ Y Sbjct: 146 LFQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNNYDKQIYLDDVAKQFSISRSY 205 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L++ ++ G + + +RI A + L TN+S+TDIAF G++ + F F+++ Sbjct: 206 LSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDAFRRIKG 265 Query: 266 FTPKSYRKK 274 +P YR Sbjct: 266 ISPNKYRHN 274 >UniRef50_C0D9W5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9W5_9CLOT Length = 316 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 98/278 (35%), Gaps = 10/278 (3%) Query: 8 APEIATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEINGK 62 +E+ F +F V +Y + LH H + + G +NG+ Sbjct: 17 ISTNEKQQEEVRFLSGDFPVSVYTQHYRYAASDYVPLHWHGELQVLWIAEGALEYSVNGR 76 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF-----EQHYLPLLPYCFVASQ 117 +L + + H S G +R L + + F E + LPLL Sbjct: 77 HFVLGPDKLLLVNRRQLHGSRTMGGDSRTLCINFTPDIFHPLIRENYVLPLLQSDSFTHS 136 Query: 118 VYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST 177 + ++T ++ + + + + + L T Sbjct: 137 LLLLLPYQTEKLKTFLNWKCEPLQYFSVINFLSLVFEDILGSSENTKNPQNYEEIKLIQT 196 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + + + + A + ++ T ++Y G +P++ +NE R+ AK + + Sbjct: 197 MIRFVQTHYAEPLTVRQISAYAITNKNRCTALFRKYTGLSPIKYLNEYRLYTAKNMIVSS 256 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + +++I+ + GY+ S FI+ F+ P YR + Sbjct: 257 DKPISEISSDVGYNQISYFIEQFRGSYGLPPLKYRNQF 294 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 7/254 (2%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS-FYEF 86 F ++ + S +H H + E V++G N ++ L RGD V IP + H + Sbjct: 25 FSKDEGDWKSIMHTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEHTERSSQN 84 Query: 87 GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEL 146 +GI F F + + + ++ + + G + + Sbjct: 85 HPLEYYVLGIDGISFLSQKDRECAQVFCN---FEHDPSIHELFRQMLYEIRTAQYGSQTI 141 Query: 147 VEMVTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVALSAKSQ 203 + + +I ++ ++ + + +++ D L+ + L+ ++ Sbjct: 142 CQHLLEILILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTLTGLTHMNK 201 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 Y+ + +Y G +P+Q +N+ R+ A+ L+ TNYS++DIA G+SS S F + F+K Sbjct: 202 YYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYFTQIFRKN 261 Query: 264 TSFTPKSYRKKLTE 277 + TP YR++ + Sbjct: 262 FNMTPVKYRQEHAK 275 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 89/247 (36%), Gaps = 11/247 (4%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNV 94 G H+H E V G + + + + + I H T ++ + Sbjct: 38 ETFGPHKHLRIEINYVKKGNCILHLENESISFSENEMMVICSNVEHTFEAGSEDTTLMQL 97 Query: 95 GISKRFFEQH-------YLPLLPYCFVASQ----VYRTNNAFLTYVETVISSLNFRETGL 143 F + L P + + N + V+ +++ +N + Sbjct: 98 EFLPEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNEMNQKSKYY 157 Query: 144 EELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 + LV M ++ + Y +E + S+ + ++ + + + Sbjct: 158 QYLVVMYYAELLILIYRYLDEAYLPICTNDSLKKAISYIRLNYQSDITISDVASQTGVGE 217 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 YL + +Y +P+ +N+IRIN A + L T SV ++ F G+ SP F + FK+ Sbjct: 218 RYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSPQYFSRIFKQQ 277 Query: 264 TSFTPKS 270 +P+ Sbjct: 278 MGISPRE 284 >UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG6_9CLOT Length = 334 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 108/277 (38%), Gaps = 25/277 (9%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 H+ ++ + H HD++E V G Q K + D + + + H + Sbjct: 57 HLACFSDEDF---FHCHDFFEMIYVYRGNCLQRFPDKEFTMREHDLLLLNPYTIHAPYTI 113 Query: 86 FGATRILNVGISKRFFEQHYLPLLPYCFVASQVY------------------RTNNAFLT 127 + N+ ISK FE+ L L+ + S+ N L Sbjct: 114 KNEDSVFNILISKTLFERSLLSLISDNRIFSEFIINCLYQSSKSNDYLYFPANENEPVLD 173 Query: 128 YVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDD--VPQWLKSTVEKM--HD 183 VE++I +E ++++E + +L ++ + Q T+ + + Sbjct: 174 LVESIIIEYLEKELSYQKVMEASLVLLFAKLSRIYHKRFSSEVLENQKNTQTIVSILAYI 233 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 E +LE++ S +L+R ++ GK QI+ + +I A+ LE + ++ + Sbjct: 234 NENAPNVSLESISERFNYSTGHLSRMIHQFTGKPYSQIVQKFKIERARSYLENSELTIPE 293 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 I +G+ S + F + FKK TP YR N+ Sbjct: 294 IMELSGFHSANYFYRMFKKFYLMTPNEYRSNYAAANK 330 >UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BH94_9GAMM Length = 305 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 87/245 (35%), Gaps = 10/245 (4%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS- 97 LH+H E VL G ++N + L GD +FI HH + +L + Sbjct: 27 LHRHQATEALWVLQGAIRVQVNDHQYSLRDGDLLFINADDHHATEAASDDNLVLCLQHRF 86 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINR 157 + P + +++ N T + + ++ + E + Sbjct: 87 EELVNVSVAPGTSNPVLKARL----NDLRTTLAHLWWEQKYQPAHWQLATENGLAQLQLI 142 Query: 158 LRHYREEQV-----IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQR 212 L Y D W + + + +L ++ S+ YL+ + Sbjct: 143 LLRYFSSASPAPAESRDDASWRIQQITRYLEAHYREPISLTSLSEHFGLSETYLSHYFKD 202 Query: 213 YYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 G T ++ + ++R+ L T+ +V ++A E G+ S F FK+ TP +R Sbjct: 203 KTGSTLVRWLTQLRLERCLPDLIQTDSTVAELALEHGFPSIKAFNSAFKREYQCTPSEFR 262 Query: 273 KKLTE 277 ++ Sbjct: 263 QQQQS 267 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 99/274 (36%), Gaps = 23/274 (8%) Query: 21 NGKNFHVFI-YNKTESISGLHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 N + F FI Y + +H H D+ E +V+ G ++ ++ +++GD I + Sbjct: 11 NDEGFPFFIQYGYHSNNLSIHTHTDFSELVIVMNGTATHIVDNEKFNIKKGDVFVINSNT 70 Query: 79 HHQSFYEFGATRILNVGISKR-------------------FFEQHYLPLLPYCFVASQVY 119 H + RI N+ E ++ + + Sbjct: 71 CH-GYENAKDFRICNIMYRSENLLLADYDIKKNAGFHALFVIEPYFTKEHSFKSNLTLKP 129 Query: 120 RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE-QVIDDVPQWLKSTV 178 +++++S + G + + + ++ L + + V + Sbjct: 130 LDFEKIHILLDSLLSEYMTKTDGWKTSTKALFMLLVVTLARLYDFGNSSEKVDVINIAKS 189 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + +++ + +S S + R Y TP+ I +RI A L+ T Sbjct: 190 ISYIENHYTEDISIDLLAKISHYSPRHFARIFSETYSTTPLNYIISLRIRRACSLLKETT 249 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 ++ IA + G+S + F + FKK TPK YR Sbjct: 250 LPISTIAIQCGFSDSNYFSRIFKKNLYLTPKQYR 283 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 95/251 (37%), Gaps = 9/251 (3%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE-FGA 88 T+ S H H++ EF + G + + + ++ D + + H Sbjct: 51 KYGTDWKSLPHSHNFAEFFYITNGSGQFSVEKEILDVKANDLIILNPTIVHTEISNPSKP 110 Query: 89 TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVE 148 + +GI F+ ++ + Y ++ + + + + Sbjct: 111 MEYIVLGIEGIKFQAE-----DQGYILLNSSAHKSDLHLYFNSLAHEMKSEQPYRNFVCQ 165 Query: 149 MVTFYVINRLRHY---REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 + + + + V + +K ++ +E + +L ++ Y Sbjct: 166 NLLNIIFTMILRNDAFKISIVSGPKLTRECNIAKKYIEENYQENITIETLSSLVHLNKYY 225 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 ++ +G +P+ + + RI + L TN+S++ I+ G+SSPS F + FK++T+ Sbjct: 226 FVHNFKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAFKRMTN 285 Query: 266 FTPKSYRKKLT 276 TP+ Y+K Sbjct: 286 ITPQEYKKMYK 296 >UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1K3_CLOBU Length = 285 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 110/271 (40%), Gaps = 8/271 (2%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 E L ++ LH H+ EF LVL G +IN K + ++RG+ F+ Sbjct: 9 ETDLLIPAKIYIGNSKGENCHYPLHWHNNLEFVLVLCGEIKGKINNKYIDVKRGEIFFVN 68 Query: 76 LGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVIS 134 G H+++ + + + +S ++++ + Y F + + + Sbjct: 69 SGELHETWANDKNKIKAITILLSYELLKKYFPNIDSYYFDFEEKEDSKGKIKDLIVKCGE 128 Query: 135 SLNFRETGLEELVEMVTFYVINRLRHYREEQV-------IDDVPQWLKSTVEKMHDKEQF 187 +E E + +V + N L ++ I++ + ++ Sbjct: 129 IYTNKENFYELNMSIVLMELCNILFKECLKEKEVGNIYNIEEKREVNIKRAITYMEENYD 188 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + +L ++ + Y +R ++ G+T +N+IR+ + K+L T S+T+IA Sbjct: 189 LDLSLSDISREIGMAPTYFSRFFKKNTGETFYSYLNKIRLYHSYKELINTEASITEIALN 248 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 G+S+ FI+ FKK + TP YR + Sbjct: 249 NGFSNVKSFIEIFKKAYNNTPAKYRNESKRI 279 >UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A5_CLOCE Length = 289 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 90/278 (32%), Gaps = 18/278 (6%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 A+ E FN F + S + H H+++E G ING L+ Sbjct: 6 ASNFEHISFNDITFPFNCFYIKNSNTLPHWHNHFEMVFSQKGSCMVYINGSSFLVSENQL 65 Query: 72 VFIPLGSHHQSFYEFGATRILNVGISKRFFE---------QHYLPLLPYCFVASQVYRTN 122 + IP GS H F + G+ + + FE + P + F Sbjct: 66 IIIPPGSLHSIFPQ-GSCSYCAIVAGESLFEGLVADPHISEVLTPFMSIGFYPPLHLSEK 124 Query: 123 NAFLT----YVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVP----QWL 174 + V + + + G ++ + + L+ + L Sbjct: 125 DRVFKKCFLLVHELQRENDQKRNGYGARIKSQMIILFSVLQESLPSEFFKKNKLPDSTRL 184 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 + +M S ++ +R + GKT ++ + R+ A+K L Sbjct: 185 IKYSLDYLRIHYSERITVNDMSVYCHLSIQHFSRLFKACTGKTFVEYLTLFRLEKARKIL 244 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 T+ +T I G+ + + F + +KK P R Sbjct: 245 IGTDIPITQIPDLVGFCNSNYFCRLYKKYYGHPPSKDR 282 >UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Clostridium difficile RepID=Q184W8_CLOD6 Length = 295 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 102/279 (36%), Gaps = 22/279 (7%) Query: 23 KNFHV-FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 F + N+ E ++ H H E L+ G IN K + L++G+ V I G H Sbjct: 12 HEFPFRSLSNEGEVLTTPHWHKEIEILLITEGVVNLFINDKPMQLKKGEIVIIKGGDIHY 71 Query: 82 SFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-----------RTNNAFLTYVE 130 G+ L FF L + + + + + Sbjct: 72 ILPSPGS-ERLVFQFDISFFNDLILLNEEKESLINLFSSIKKCSRDWSAKIRKSVFDILI 130 Query: 131 TVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQW---------LKSTVEKM 181 + + ++ G ++ + +I L ++ ++ ++ + + K Sbjct: 131 DIYNEDLYKIEGYSYAIKGKMYNLIPILYRQIPREIEENTVEYEINSKEILERLNNIFKY 190 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 +K LE++ S Y T+ ++ GKT + +NE R+ AK L N S+ Sbjct: 191 VEKNYKQPIKLEDVSYEVGFSVYYFTKFFKKNTGKTFITFLNEYRLEKAKWILLNNNISI 250 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 D+ E G+ S F + FK+ +P ++K+ + Sbjct: 251 VDLVEEVGFGSTKTFYRVFKEKIGVSPLEFKKRYNSLEK 289 >UniRef50_A7AFT7 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AFT7_9PORP Length = 289 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 95/286 (33%), Gaps = 21/286 (7%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 + ++ + + + +Y K E LH H E V+ G ++ I E G Sbjct: 6 KFEQIKKDSCASLRYDYSSLYPKDE--MPLHFHPEIEICYVVKGSGYRMIGDFLEPFEEG 63 Query: 70 DFVFIPLGSHHQSFYEFGAT------RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN 123 + V +P H Y + R + V + + + + A ++ Sbjct: 64 EVVLVPTNQPHCWMYNPESCEPDGKRRCIVVQFNPDLLQTGLSFFTEWEYAAHRLSAIQQ 123 Query: 124 AFLT------YVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDD------VP 171 L +++ + +N L+ + I + + Sbjct: 124 GILLTGETAGKIKSCLEEMNLLNASERMLMLIRILQQIGTTTDLIPIGLQETAFNGITKN 183 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + K + + L + + + S +R GKT INE RI Sbjct: 184 MQRMQLIFKYVIEYYKEKITLSDAANVISMSTTAFCSFFKRETGKTFTNFINEYRIEAVG 243 Query: 232 KQLEM-TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 L + + +IA++ G++ F + FKK+ TPK +R K+ Sbjct: 244 TLLRNFPDKDINEIAWQCGFTDIPYFNRYFKKMKQMTPKQWRYKIQ 289 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 100/259 (38%), Gaps = 21/259 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD+ E L+ G + G + GD + H +Y+ ++N+ Sbjct: 55 HTHDFCELALITRGSAMHWLEGAEFPITAGDVFVLQGQQSHY-YYDLQKLEMINIMFDPE 113 Query: 100 FFEQHY-----LPLLPYCFVASQVYRTNNAFLTYVE--------------TVISSLNFRE 140 +P F+ ++R + F +++ + + + + Sbjct: 114 QLNLPETRLRKIPGYRALFLLEPLFRKQHRFTSHLHLSRSTLAHSERIAVELDNEVRGKM 173 Query: 141 TGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLK-STVEKMHDKEQFSESALENMVALS 199 G E + ++ L +E + L+ + V + E +E+ A++ Sbjct: 174 EGYEAAMFAKFVELVVYLSRLYQETESTNAEALLRVAKVIGSIEDEFTKPWKVEDFAAMA 233 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S+ R + G+TP+ + ++RI + L T S+++IAFE G++ + + + Sbjct: 234 HMSRANFMRVFRTATGETPINYLLQLRIQKSMTLLTSTKLSISEIAFEVGFNDSNYYTRQ 293 Query: 260 FKKLTSFTPKSYRKKLTEF 278 FK +P +YR+ T F Sbjct: 294 FKASQGISPLAYRRTHTGF 312 >UniRef50_A8SUZ2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SUZ2_9FIRM Length = 298 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 97/278 (34%), Gaps = 21/278 (7%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 + F H H + E ++ G+ + E + +LE GD + H Sbjct: 16 EAFLFDAQTSEMFPILPHWHYFVEILYMVEGKAYVEAGEENYVLEPGDLIVFYPQMAHAI 75 Query: 83 FYEFG-ATRILNVGISKRFFEQHYLPLLPYCFV-------------ASQVYRTNNAFLTY 128 + R + L + S+ Sbjct: 76 YSTGQLPIRYYVLKFDPAHLNISGSALPSISSLIAMAAVEQKLSVYFSKEKFNQEKMKQL 135 Query: 129 VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ-------VIDDVPQWLKSTVEKM 181 ++ + +L ++ G + ++ ++ + +++ + V + V + Sbjct: 136 IQGSVKALEEKQFGYDIIMHSNYCLLMAEILRIWKQEGFQIKKRKKETVLSEKFTEVSEY 195 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + + ++ + S Y + YYG+T ++I +R+ A+ L+ T++ + Sbjct: 196 ISQHYQEDLSVAELAEKFHMSYSYFAAIFKEYYGQTCKEMILTVRLQKAEDLLQFTDFDL 255 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 T I+ E G+ S FIK FK+ TP+ YR K F+ Sbjct: 256 TYISQETGFCDCSHFIKAFKQKYGVTPRKYRMKEKSFD 293 >UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9W6_OXAFO Length = 293 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 92/258 (35%), Gaps = 17/258 (6%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 Y K +H H+ +F VL G + + L G VFI H + G Sbjct: 34 YPKNPGFLVMHWHEDLQFIYVLEGEIEVRTLDEELKLAAGHGVFINKNVVHSV-NQSGDC 92 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYV---------ETVISSLNF-R 139 + +F + Y V S V + ++ +++ L+F Sbjct: 93 HYKSFIF-PDYFLRFYFGSPAEHLVDSLVENMDVPLCRFIPGIGWCDTVLSILRKLSFLE 151 Query: 140 ETGLEELVEMVTFYVINRLRHYREEQVIDDVP-----QWLKSTVEKMHDKEQFSESALEN 194 + G E V V ++ + R+ + +K +L++ Sbjct: 152 KNGNEFYVYEVLVFLTSLWLEIRKNVSLPSGKKEKPVSRRMQRFLAYIEKHYAEAISLDD 211 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + S+ R + TP + + E R++ A L+ T+ V +IA G+ S Sbjct: 212 LAGSGNVSKSECLRCFRVSMQTTPYKYLVEYRLSKAAILLQETDKPVGEIASCTGFHQAS 271 Query: 255 LFIKTFKKLTSFTPKSYR 272 F K F++ T F+P+ YR Sbjct: 272 YFGKCFREKTGFSPRDYR 289 >UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4Y3_9CLOT Length = 291 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 90/269 (33%), Gaps = 19/269 (7%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 F+ + + H+H +E + +L+G + GD H Sbjct: 20 FYHSVLPPLKRAYSEHKHTAFEISCILSGSGLYKTQNALYHFHAGDIFLYSTNEIHYIIE 79 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN------------AFLTYVETV 132 F ILN+ RF L ++ ++ + + Sbjct: 80 IFDNCDILNLHFEPRFIWSPGNDLFDSKYLNIFFNHGDSFENCLEQDEDTARIRQLLLEI 139 Query: 133 ISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST-------VEKMHDKE 185 N + E +V++ ++ L + +S D Sbjct: 140 EKEFNEKLPDYELMVKVKVLTILVTLGRNFNFSIPQKALSQSRSQHLLQLDKALAYIDDN 199 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 S+ L + + S+ Y + + G TP + I R+ A L T++S+ DIA Sbjct: 200 ISSDIDLNTIAKTAHMSRSYFSTIFKEMNGLTPWEYIINKRVELAAHYLTSTDFSILDIA 259 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + G+++ + F FKK+T +P +RK Sbjct: 260 CKCGFNNTANFNHAFKKVTRKSPSDFRKS 288 >UniRef50_B7C800 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C800_9FIRM Length = 295 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 90/254 (35%), Gaps = 14/254 (5%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL 92 LH H+ +F L G ++NG L+ + +FI G+ H S + Sbjct: 32 GSGFKSLHWHEDLQFVLCTKGYVNYQVNGIEYKLKEKEALFINKGALHMSNDMSEDGEYV 91 Query: 93 NVGISKRFF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGL 143 + + ++ P F+ + N ++Y+ + + Sbjct: 92 TLTFPEELLFFFKESRMKYKYVWPYTRMDFLRCYEIKEENEIISYLYDIYNIYLNGSDMF 151 Query: 144 EELVEMVTFYVINRLRHYREE-----QVIDDVPQWLKSTVEKMHDKEQFSESALENMVAL 198 E V ++ + L + D Q + E +L+++ Sbjct: 152 EYDVSILITMIWRDLVKSLSKIDFIPNKKDVERQERVQVMLVYIHTHYADELSLKDIADA 211 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S R + TP + + + R+ A L+ +VT+I+ G+++ + FI+ Sbjct: 212 GMMSIAQCNRCFNKMLNVTPYEYLIQYRLQKATNLLKDATLNVTEISEIVGFNNVTHFIQ 271 Query: 259 TFKKLTSFTPKSYR 272 FKK+ +PK YR Sbjct: 272 AFKKVYGISPKKYR 285 >UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GD53_GEOUR Length = 291 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 99/271 (36%), Gaps = 8/271 (2%) Query: 14 AREQQLFNGKNFHVFIYNKTESIS---GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 R F G VFI H H Y F L I GK VL + G Sbjct: 21 LRYVDCFIGNEIGVFIPAVGPCFYAITPDHSHPAYSFVLTFDSYTRLAIGGKTVLSQPGQ 80 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHY--LPLLPYCFVASQVYRTNNAFLTY 128 + I + H R + + I + FE+ P + + + + Sbjct: 81 IMAIDPDAVHHEMTADETPRYIAIFIDRDLFEKELGRYPSIRPRPFRFRTFTPGREMMGL 140 Query: 129 VETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV---PQWLKSTVEKMHDKE 185 ++ ++ R E L+ + +++ L + D + V + Sbjct: 141 LKEFMNEAEARLPAREPLLAAIGTRIVHALIRAAHGIITPDASIGNRVEIHRVIEYIQTH 200 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + ++ + A++A S + +R +R G P+ +N +R+ A+K L SVT +A Sbjct: 201 AGKKLSIGQLAAVAAMSTSHFSRIFKRETGHPPLAYLNRVRLEQARKLLRTGECSVTSVA 260 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G++SPS F +F++ +P + K Sbjct: 261 LSCGFASPSHFTDSFRRFYGQSPTDFLKSYK 291 >UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMH3_9PLAN Length = 294 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 98/289 (33%), Gaps = 19/289 (6%) Query: 11 IATAREQ-QLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 + A E+ G +F F + E+ + H+H E T V G + + G Sbjct: 1 MTIAFEKLVPPPGHSFRCFERSALETPAKWHRHPELEITYVPYGTGTRLVGDHVARYSPG 60 Query: 70 DFVFIPLGSHHQSFYEF------GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN 123 D V H + + S F + V +++ Sbjct: 61 DLVLSGENLPHTWLSDDFVGKKFDRHIAYVIQFSNDFLGSTFFESPELNDVRLMLHKARR 120 Query: 124 AFL------TYVETVISSLNFRETGLEELVEMVTFYVINR-----LRHYREEQVIDDVPQ 172 L V ++ + ++ + + ++ L D Sbjct: 121 GLLFSPSAVQRVGDIMKLMPEQQGLTQLISLFNCLNLLAEEGGEVLASEGYTPGFDHASD 180 Query: 173 WLKSTVEKMHDKEQFS-ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 W ++ E + + + +R +R G+T Q ++E+RI A Sbjct: 181 WRIDKACNYINEHLEDPELSHAAICKEVDMNPSSFSRMFKRATGRTVTQYVSELRIGIAC 240 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 + L T S+ D++ ++G+ + S F ++F+K+ TP+ YR E ++ Sbjct: 241 RLLMETGDSILDVSLKSGFDNLSSFNRSFRKIKQMTPREYRSTFLEAHK 289 >UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM6_9CLOT Length = 383 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 103/271 (38%), Gaps = 26/271 (9%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 +T +GLH H+Y+ T V G + G+ ++GD F+ H+ + Sbjct: 108 RTHFETGLHTHEYFVITYVFRGECYCYFGGEEFHFKQGDIWFLNTQVSHKLLLPGDDCVV 167 Query: 92 LNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNA-------------FLTYVETVI 133 ++ + + F L + F + ++ +N Y+ ++ Sbjct: 168 FHICLRQTSFCSVLLDKIKNNEQFVHFFVNSIFDEDNNPCLMQFHIRELSVAQYYLFKML 227 Query: 134 SSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWL-------KSTVEKMHDKEQ 186 ++ +E++ + ++ +L E + ++ S V + Sbjct: 228 EEYYDQKMHSQEVIAYLFCCLLIQLERNCEAEAVEQEAHRNGRQKNLDISEVIAYLMEH- 286 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 L+ + YL+R QR+ GKT ++ +N IR+ A + L T + I+ Sbjct: 287 QQTVTLQQAASHFHYVPAYLSRFIQRHTGKTFLEFLNGIRLERAAEMLRNTTLPIRQISH 346 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 GYS S F ++FK+ TP+ YR E Sbjct: 347 MVGYSDRSSFDRSFKRQYHMTPRKYRDNGRE 377 >UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWT0_CLOB8 Length = 263 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 100/266 (37%), Gaps = 10/266 (3%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 + E +NF H H Y E V+ G IN + L+ G+ Sbjct: 1 MYPFFEANKSGDQNF-FSSKILENFSFPPHLHPYVEIAYVIEGSIEVTINDTQCCLKAGE 59 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKR----FFEQHYLPLLPYCFVASQVYRTNNAFL 126 H F G ++I+ S FF L F++ + ++ Sbjct: 60 VSICFPNDIHT-FNSDGFSKIILFIFSPDLTRSFFGIRMDKTLENPFMSKNI--VDDGIS 116 Query: 127 TYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQ 186 + + + + + +++ + + ++ +L + + + K + Sbjct: 117 SLLYMLHDEY--KSVNNKYVIKGLLYTILGKLDSHFTFKKSSTFYNSTMQNLLKYIEIHY 174 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + +L+++ S+ YL+R G IN +RIN A+K L T+ VT IA Sbjct: 175 HEKISLDSIAKDLGFSKFYLSRIFSNKIGYQFNDYINRLRINKAQKLLSETDLPVTIIAL 234 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYR 272 E G+ S F + FK+LT+ TP +R Sbjct: 235 ECGFESQRNFNRIFKELTALTPTKFR 260 >UniRef50_C0EGG3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG3_9CLOT Length = 343 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 100/258 (38%), Gaps = 24/258 (9%) Query: 46 EFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHY 105 E + G Q K + L++ D + + + H + + N+ ISK FEQ Sbjct: 72 ELIYMYRGGSIQFFQDKELELKQHDILILNPNTIHAPYTTQEEDCLFNILISKSLFEQSM 131 Query: 106 LPLL---------------------PYCFVASQVYRTNNAFLTYVETVISSLNFRETGLE 144 + LL Y + S ++ +E +I+ ++ G + Sbjct: 132 MSLLYDNHMFTGFIADCLYHVSTAVEYLYFPSGNNGMSDENSFLIEKLIAEYINKKEGYK 191 Query: 145 ELVEMVTFYVINRLRH-YREEQVIDDVPQWLKSTVEKMH--DKEQFSESALENMVALSAK 201 ++ + L + + + + + ++ + +L+ + Sbjct: 192 NSMKAWLVLLFLNLSRTHSQLHPLKQGEFDNRGVIAEIISYINNNIEDVSLKGLSEQFNY 251 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S EYL+R ++ G++ ++I+ ++ AK LE ++ ++ + +G+ S + F K FK Sbjct: 252 SPEYLSRIIKQNTGQSFIEIVKRFKMEKAKYYLETSDLPISAVMNLSGFKSINYFYKVFK 311 Query: 262 KLTSFTPKSYRKKLTEFN 279 + +P +YRK N Sbjct: 312 RYNGISPSAYRKGARHAN 329 >UniRef50_UPI0001BC838F helix-turn-helix- domain containing protein AraC type n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC838F Length = 289 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 103/273 (37%), Gaps = 16/273 (5%) Query: 16 EQQLFNGKNFHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 E ++ V + N K + +H H YE LV+ + I E D V + Sbjct: 7 EVTPLTDEDLFVLLNNPKAKFDYPIHFHSDYELNLVMNTSGKRIIGDSIEDFENCDLVLL 66 Query: 75 PLGSHHQSFYEF-GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL------- 126 G H+ T+++ + ++ + L + + + R+ + Sbjct: 67 GPGLPHKWKAPTLDETQVITIQFHEQMYNSFLLNKRVFEPIRELLIRSTRGIVYTGKTFE 126 Query: 127 TYVETVISSLNFRETGLEELVEMVTFYV-------INRLRHYREEQVIDDVPQWLKSTVE 179 E +++ N R + + + + Y ++ + + Sbjct: 127 RVKERLLNLSNARGFNTALEFYSILYDLSIADEQRLLTSASYDSSLLVRESRSRRIEKIC 186 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 K + + L+ + L S+ ++ ++ ++ + + ++RI +A + L T Sbjct: 187 KYIEVNFKKDITLKEIAELVNMSESAISHFFKKRTNRSFITYLTDVRIGYASRLLAETTQ 246 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 SV DIAFE G+S+ S F + FKK + TP YR Sbjct: 247 SVADIAFECGFSNLSNFNRIFKKYKNQTPTDYR 279 >UniRef50_C0EAY1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAY1_9CLOT Length = 329 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 96/277 (34%), Gaps = 22/277 (7%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 + H HD +E V G E+ R L +GD + + H Sbjct: 54 SFRISIHFDPPGFKHQAFHNHDCFEMIYVYQGELENEMPANRCTLHQGDILLLNPNVWHN 113 Query: 82 SFYEFGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNA------------ 124 + N+ I K F+ + +L F + +YR + Sbjct: 114 VYRNDEKDIAFNIAIPKELFQTYLSNILEDNQMFSFFFSDYLYRDPKSERYLYFQNSGDP 173 Query: 125 -FLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK--- 180 VE ++ ++ + + ++L +E+ + ++ + Sbjct: 174 WVREPVERMVREYFSKQPNWNSMTLACLIALFSQLSRTHQEESKIAAYENDRNRIVYEMV 233 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + + L M S +L++ ++ GK Q++ E R+N A LE TN Sbjct: 234 AYVNAHMQDVTLNQMAEHLKYSPGHLSKLLRKS-GKNFSQLLLECRMNKAGYYLEHTNLP 292 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 +++I GY++ F K F++ TP YRK + Sbjct: 293 ISEIIERIGYTNEFHFYKLFRQSFHTTPTEYRKSVRS 329 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 12/258 (4%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEF 86 + ++ ++ H H YE +++G+ I + +++ GD V I H++ E Sbjct: 17 YRKARSHNMPVSHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVIISPNILHRTTNTET 76 Query: 87 GATRILNVGISKRFFE-QHYLPLLPYCFVASQVY-----RTNNAFLTYVETVISSLNFRE 140 L V I ++ Y+ +L + + A T ++T+I+ ++ ++ Sbjct: 77 PEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIETMLQTMIAEMSEKK 136 Query: 141 TGLEELVEMVTFYVINRLRHYREEQVIDDVPQ-----WLKSTVEKMHDKEQFSESALENM 195 G E + ++ + + ++ + S V + + +E +L + Sbjct: 137 PGFELYALTLALQLLLICCRHAKSSSMETLESPSPMHERISEVVRYMNSHYMNELSLHLL 196 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S YL+R + G T ++ +N +RI AKK LE ++ V IA G+ S + Sbjct: 197 AEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVNLIAKRVGFGSVTH 256 Query: 256 FIKTFKKLTSFTPKSYRK 273 F + FK +T + P YRK Sbjct: 257 FGRVFKSVTGYVPLHYRK 274 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 109/259 (42%), Gaps = 10/259 (3%) Query: 21 NGKNFHV-FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 ++ + + + S +H H + E LV G + L++GDF+ + + Sbjct: 17 KSNLIYITYTKYENDWPSFMHTHPFTELFLVTGGVGEFYVENNIYPLKKGDFILVNPNAS 76 Query: 80 HQSFY-EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNF 138 H E + V + L L + N + Y++++++ Sbjct: 77 HTEKSDEKNPLEYIAVAVD-----NFSLNLTDTNHLMFNCISKNPNIIKYMDSMLAEQEG 131 Query: 139 RETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST---VEKMHDKEQFSESALENM 195 + + + + + ++ + + + + ++K D S+ ++++ Sbjct: 132 NKAYSDHICQNILEIILIEILRITKSDIDTEPTVNASKECFKLKKYMDSNYASKITIDDL 191 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 LS ++ YL + +Y+G +P+ + IRI AK+ LE ++YS++ I+ G+SS S Sbjct: 192 AKLSNLNKYYLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQSY 251 Query: 256 FIKTFKKLTSFTPKSYRKK 274 F + F K +PK+YR + Sbjct: 252 FTQCFIKSCGLSPKAYRNR 270 >UniRef50_A9E4Z4 tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Kordia algicida OT-1 RepID=A9E4Z4_9FLAO Length = 288 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 98/261 (37%), Gaps = 14/261 (5%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH---QSFYEFG 87 LHQH+ + + +++G+ I + D + H Sbjct: 22 RGRTFYEQLHQHEEIQLSYIVSGKGTFIIGDTIRDFQPNDVLLFGSNVPHVLKSDVTTDE 81 Query: 88 ATRILNVGISKRFFEQHYLPL---------LPYCFVASQVYRTNNAFLTYVETVISSLNF 138 + ++++ + F +H+ L L + + + + E V+ + Sbjct: 82 DSYMISLFFTHDSFGEHFFMLPKLQQLQKLLNDARFGVKFTKHSTIVKSLFEGVLHQNSL 141 Query: 139 RETG-LEELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVA 197 ++ E++ ++T + + + D S V + + LE++ Sbjct: 142 QQFATFFEILSVLTPSDYETVSSFINTKNYTDDEGKRMSAVFEFVMNHFDQKIILEDIAT 201 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN-YSVTDIAFEAGYSSPSLF 256 ++ + + ++ KT + + E+RI A K L ++ S+ +IA+ G+ + S F Sbjct: 202 VANMTPNAFCKYFKQRTNKTFFRFLTEVRIENACKFLTNSSQLSIAEIAYSCGFFNVSNF 261 Query: 257 IKTFKKLTSFTPKSYRKKLTE 277 + FK++ TP +RK T Sbjct: 262 NRKFKEIKGLTPTKFRKSYTS 282 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 86/268 (32%), Gaps = 18/268 (6%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 H H E V G I+ + GD I H Sbjct: 42 ENGRPDILFHWHPELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDNQPH 101 Query: 91 IL-NVGISKRFFEQ---------HYLPLLPYCFVASQVYRTNNA----FLTYVETVISSL 136 + Q + PL F Q R ++ + + + Sbjct: 102 HTDTLHFHLDMLGQSLVDPLSLRYLQPLQNSNFKFKQCLRPSDEGYTEIKDLLFKIFKMI 161 Query: 137 NFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKST----VEKMHDKEQFSESAL 192 +E E L++ +I L YR + + K+ + ++ + Sbjct: 162 RQKERHYELLLKSKLEELIYLLYFYRLVERKTSDDHYRKNEKIREIIDYINQHYAENLTI 221 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 E + L S+ + +++ G + + I + R+N A ++L + V +IA G+++ Sbjct: 222 EKLSELMGYSKTHFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVGFNN 281 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 S F + FK TP YRK + + Sbjct: 282 LSNFNRQFKHYYDQTPSQYRKTHSNKKK 309 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 104/289 (35%), Gaps = 20/289 (6%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 M++ + T + ++ N K F N +H H E + L G Y +I Sbjct: 1 MIENLNGI--HETVKYKEYSNVKLF----INAEAEDYPIHWHTPMEIIMPLEGGYTVQIG 54 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRIL----NVGISKRFFEQHYLPLLPYCFVAS 116 V L D +FI G H+ R++ +SK L L+ + Sbjct: 55 DDLVHLNENDIIFIASGVKHRLIAPDTGKRLILQIEWSAVSKIKELNSILTLIAPAITLT 114 Query: 117 QVY--RTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ--------V 166 ++ + + + E ++ V+ + + Sbjct: 115 PETSGDIHSNIRKLLLDISNEYQTDSFLSEAVIYSKILEVLVLIGRHHTASSCHFNVGRH 174 Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 ++ + D + L+ + ++ S+ + TR +++ T + +N+ R Sbjct: 175 KQQEYLERFLSICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKR 234 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 I A L N SVT+ A ++G+++PS FI+ FK TP +RK Sbjct: 235 IELALTLLADPNISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFRKMF 283 >UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C2KAS7_9FLAO Length = 311 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 90/267 (33%), Gaps = 14/267 (5%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 F+ N+ H H E V G ++I GD V I H Sbjct: 45 FLTNENIKSHVWHYHPEVELIFVCKGSGKRQIGSSITYFSEGDLVLIGSNLPHCGLTNES 104 Query: 88 --ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL---TYVETVISSLNFRETG 142 + + F + + +++ + ++ + + + + Sbjct: 105 THNEYEMVIQFKPDFLGEPIWDIPEMQRISALLEKSKAGIVFGEEVKKRIGKEITEMHET 164 Query: 143 LEELVEMVTFYVINRLRHYREEQVIDD---------VPQWLKSTVEKMHDKEQFSESALE 193 +++ L ++ ++++ + + LE Sbjct: 165 SSLDKLCRFLKILDELSVTQDYRILNAGKYYLQTQVEDNERINLIFNYVKDHFKEAITLE 224 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + L+ R ++ KT Q +NE RI A K L S+T++ FE+G+++ Sbjct: 225 EVADLANMKVPSFCRYFKKITNKTFTQFVNEYRITHALKLLAEQPLSITEVCFESGFNNF 284 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 S F +TFK+ +P YRK+ F + Sbjct: 285 SYFNRTFKEYIQKSPSQYRKEFNYFME 311 >UniRef50_C6VY23 Transcriptional regulator, AraC family n=2 Tax=Sphingobacteriales RepID=C6VY23_DYAFD Length = 302 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 92/277 (33%), Gaps = 20/277 (7%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 K+F + + H H E + G Q + + GD + I H Sbjct: 14 KSFSIRRDVVLYFYNRWHYHPELELIHIEQGSGTQFVGDNIRSFQSGDLLLIGPNLPHYW 73 Query: 83 FYEFGATRI--------LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY------ 128 + + V S+ +++L L + + + Sbjct: 74 RCDEKYFQRGSQLYAQATVVHFSEEMLGKNFLSLPENKSIHDLLVKARLGLKILGEGTDK 133 Query: 129 VETVISSLNFRETGLEELVEMVTFYVINR------LRHYREEQVIDDVPQWLKSTVEKMH 182 V+ ++ L + G + + + L + + + D + + + Sbjct: 134 VKALLHDLLNQTNGNSIIGLLQILETLAHCEDINVLSNTQYQNEYDQYDTDRINQIYQYS 193 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + ++E + ++ S R + KT Q + E+RI A K L + V Sbjct: 194 ISNFQKKISIEEIAEVANISPHSFCRYFKSRSRKTYSQFLLELRIGHACKLLSESRIPVA 253 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 + FE+G+ + + F K FK T +P Y+K+ + Sbjct: 254 QVCFESGFHNFANFNKYFKLHTGKSPMQYQKEFRKIP 290 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 100/283 (35%), Gaps = 20/283 (7%) Query: 16 EQQLFNGKNFHVFIYNKTESISGL---HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFV 72 E + ++ YNK + + H H YE + +G I ++ + GD V Sbjct: 6 ELFYGDSEDLFFLEYNKRKGHFTMSVEHIHGQYELYYLFSGERQYFIKDRKYPIAAGDLV 65 Query: 73 FIPLGSHHQSFYEFGATR-ILNVGISKRFFEQH--------YLPLLPYCFVASQVYRTNN 123 IP H++ + + ++++FEQ+ P L V ++ Sbjct: 66 LIPANELHKTSDTGVPNHARIVLYYNEKYFEQYGKEESELLLSPFLGSRRVFRLAHQERL 125 Query: 124 AFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVP--------QWLK 175 F + ++ + R G E + + + D Sbjct: 126 RFEQLLYGLLQEVQERPPGHEMPIRHAVAEALLFAARHAIHNKPDPSDGSVPPSPAAAKA 185 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + L+++ S YL+R ++Y G + I R+ A+ QL Sbjct: 186 MEIASYVADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIGITRVKEAQHQLR 245 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 T+ +T+IA E G+ S S F + FK +P+ YR + + Sbjct: 246 ETDERITEIAAEVGFESLSQFERVFKTHIRLSPRDYRNQYGQK 288 >UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG17_9FIRM Length = 317 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 98/293 (33%), Gaps = 21/293 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFI-----YNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 + E + + V+I + H H+ E VL+G ++N Sbjct: 1 MQVNVKQDFSEVMDYMIPQYPVYIRSAFLSQYHNYTAVSHWHEDVEIIYVLSGTMQYDVN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISKRFF-------EQHYLPLLPYC 112 G+ + L + + + + H + + + I E++ P Sbjct: 61 GENITLYENEGIVVNSRNFHFGYSDKKEECGFICFIIHPSVLSGNPYIRERYVRPFTECQ 120 Query: 113 FVASQVYRTNNAFLTYVETVISS---LNFRETGLEELVEMVTFYVINRLRHYR-----EE 164 + R + + + V+ + LN L + F + L E+ Sbjct: 121 AIPFLHLRPDKKWQNELLEVLWTVFHLNQDAPEFYLLCQEAVFRIFTLLYTNNMELLSEK 180 Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 D+ + K L+++ + + ++Y +P+ + Sbjct: 181 SEKADISLIQLRKMVGYIQKHYQDSIMLDDIAKIGEMGKTACCNIFKKYMNTSPIDYVIT 240 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 R+ + L T +T+IA+ +G+ + S + K+F+K TP RK+ + Sbjct: 241 YRLAQSTVLLTETRLPITEIAYGSGFHNASYYTKSFRKQYGKTPGQMRKEYLK 293 >UniRef50_C6J603 Transcriptional regulator n=5 Tax=Bacilli RepID=C6J603_9BACL Length = 288 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 97/288 (33%), Gaps = 22/288 (7%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 ++ E F N +I H H E G+ + + V LE G+ Sbjct: 1 MSEYLEIPEFQDSILFRTFLNDGMTIVYPHWHKEIEIIYSRKGKVNIGVREEIVQLEEGE 60 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA----------SQVYR 120 F P G H + R + + + F++ L + + + Sbjct: 61 IFFFPSGEAHYFLASPESERYVY-QFNLKLFDERTLRISEDSLLNLFETGEPLSRNWPQG 119 Query: 121 TNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQW------- 173 + + + G+ L + +I + + ++P Sbjct: 120 LAQKATELLIHLYEVEQTKPMGMNYLTLGYLYQLIGEFYLHLPRRQTSNLPSKRSTIQHK 179 Query: 174 ----LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 L + V + + LE++ S Y TR + G+T MQ + E RIN Sbjct: 180 ETLDLLNQVFEYVENRYREVITLEDVAKFVGFSPYYFTRFFKANTGQTFMQFLTEYRINQ 239 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 AK L N + ++A +AG++S F FK +P YRK L E Sbjct: 240 AKFILANENIPMAEVADKAGFASVKTFHHVFKDEVGQSPLQYRKNLIE 287 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 106/282 (37%), Gaps = 18/282 (6%) Query: 9 PEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 E+ E L N + + +TE H HD+ EF +++ G+ I+GK +E Sbjct: 3 KEMYDITEGDL-NPEFLFTCVSTRTEEEQNYHAHDFIEFAVIMGGKGKFYIDGKDYEVEE 61 Query: 69 GDFVFIPLGSHHQSF--YEFGATRILNVGISKRFF----EQHYLPLLPYCFVASQVYRTN 122 GDF+ + G++H+S Y + + S F ++ + R Sbjct: 62 GDFILLNPGTYHRSKAGYSKEGLKECYIAFSGVSFKGCKSGYFPSFKGNGKIIKMADRMK 121 Query: 123 NAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQV----------IDDVPQ 172 + G +++ ++ + ++E+ + Sbjct: 122 KNIFQICTVMNKEARECSAGRYFMLKAYLIQILCLVVREQKEEKQEGEGKGYIFQSTGKK 181 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 ++ + K ++ + +LE + A S Y+ + + G TP+ + +R+ AK+ Sbjct: 182 YVVQQIMKYMEENYREKISLEQIAANMYLSSFYIAKIFKSETGDTPINYLIRLRMEKAKE 241 Query: 233 QL-EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L + ++A GYS F K FKK +P Y+K Sbjct: 242 ILEISPEEPIKEVAAAVGYSDAYHFSKLFKKHYGISPLYYKK 283 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 105/279 (37%), Gaps = 25/279 (8%) Query: 21 NGKNFHVFIYNKTESI-SGLHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 +F FI H H D++E +VL G +N + +++GD + Sbjct: 11 QDPSFPFFIQYGFHDDAMPEHFHHDFFELVIVLNGTATHIVNSEEFFIKKGDVFVFNMDL 70 Query: 79 HHQSFYEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNNAFLTYVE--- 130 H + + +I+N+ ++ + FV +R +F + Sbjct: 71 SH-GYKDPHNFKIINIMYKPERLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNTLSLSI 129 Query: 131 -----------TVISSLNFRETGLEELVEMVTFYVINRLRHYR--EEQVIDDVPQWLKST 177 + ++ G + ++ ++ L E +++ D L Sbjct: 130 SSLEYVAELGARINEEYKRKDQGYQTMIYARFMEMVVYLSRQYIIENKLLHDTFVHLAKA 189 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + + + LE + + S + R + YG TP I +R+N A L+ + Sbjct: 190 IL-FLEDNYLNPIKLEKLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACSLLKNS 248 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 N + DIA E+G+S + F + FKK+T TPK YR + Sbjct: 249 NLCIADIALESGFSDSNYFSRQFKKITGITPKEYRARYK 287 >UniRef50_C6JDN8 Putative uncharacterized protein (Fragment) n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDN8_9FIRM Length = 301 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 88/291 (30%), Gaps = 24/291 (8%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRYFQEI 59 + T RE F + + + +H H+ E +L G ++ Sbjct: 3 MRKILVDETNRELCEHGTVGFPMTVNHDDLWAFEGKSVPIHWHNDLEISLPREGEAIYQV 62 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLP-------- 110 K + GD + + H + R F Y + Sbjct: 63 YRKSYTVRPGDVLLLNRNVPHSCHSPNNSHARYSTFLTRPDFICGEYGSDVERRCFRPFL 122 Query: 111 -----YCFVASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQ 165 C + + + + + + + E ++ + + + + Sbjct: 123 QNSAVPCILLTSESSCTRTVIQKLNETEALFDQKTFCYELKIKGLLCEIFGMILCEHQND 182 Query: 166 -----VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + + + + S +L+ + S+E R ++ GKT Sbjct: 183 LAKFIPANQLELERLEQMLDYLNTHFGSVISLQELADQVHLSREVCCRLFKKMTGKTITG 242 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 + E R+N + ++ YS+ IA G+S+ S F + F++ P Y Sbjct: 243 YLEEYRVNQSLPLVQSCQYSMIQIADMTGFSNASRFARAFRRQFGCNPGEY 293 >UniRef50_UPI0001C3660E AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3660E Length = 334 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 103/280 (36%), Gaps = 22/280 (7%) Query: 17 QQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 + L +GK + + + H+H+Y E + G I+G+ V+L G+ +F+ Sbjct: 55 KMLEHGKLIRIRPHTRF-VHFPKHKHNYIEVIYMCKGETTHVIDGETVVLRTGELLFLNQ 113 Query: 77 GSHHQSFYEFGATRILNVGISKRFFEQHYL------------------PLLPYCFVASQV 118 + + +N I FF+ + Y Sbjct: 114 HATQEILPAGEGDVAVNFIILPEFFDTAFEMMGEEENLLRDFLVGCLCNDTRYASFLHFK 173 Query: 119 YRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV--PQWLKS 176 VE ++ +L + + ++ + +L HY ++ Q L Sbjct: 174 VADVLPVQNLVENMVWTLLNDQPNKRSINQITMGLLFLQLMHYTDKISHTSEGFDQRLIF 233 Query: 177 TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 V D+ + L + ++ +L+R +R G+T +++ R+N A L Sbjct: 234 QVLGYIDENY-RDGELTELSSMLGYDIYWLSRMVKRLTGRTYKELLQIKRLNQAAFLLLN 292 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 T +V D+A GY + S F + FK+ +PK YRK Sbjct: 293 TRLAVADVALAVGYDNTSYFYRIFKERYQMSPKEYRKNNR 332 >UniRef50_C7GHR9 Transcriptional regulator, AraC family n=2 Tax=Lachnospiraceae RepID=C7GHR9_9FIRM Length = 273 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 98/257 (38%), Gaps = 6/257 (2%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-QSFYE 85 + + K H H+ E V G + + ++ GDF + H + Sbjct: 12 IVVEWKKTVHFPPHLHEAIEVVYVTDGDIELGVGQELYHMDEGDFAIVFPNVIHHYQVFG 71 Query: 86 FGATRILNVGISKRFFEQHYLPLLPYCFVAS--QVYRTNNAFLTYVETVISSLNFRETGL 143 +++ + + F +Y L Y + + + + ++ + + Sbjct: 72 KKENKVIYLYLDPTLFPSYYKELQIYSPKNPVVKKEQVHPDVVNAIKYLAGITEGNPMLI 131 Query: 144 EELVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 + V+M+ +V + + V D L + K + +LE M S+ Sbjct: 132 QAYVQMILAHVFAEMPMVDKSTVGSDD---LIYNAVEYVAKNFREKISLEKMAYDLCVSK 188 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 L+R + + + +N +R+N+A LE T S+T+I + G+ S F + FK Sbjct: 189 YVLSRMFAKTFHCNFSKYVNGVRLNYAVAALENTMDSITNICLDCGFESQRTFNRVFKDR 248 Query: 264 TSFTPKSYRKKLTEFNQ 280 TP+ YRK++ N+ Sbjct: 249 YKITPREYRKRMEHNNR 265 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 105/279 (37%), Gaps = 16/279 (5%) Query: 18 QLFNGKNFHVFIYNKTESISGLHQ----HDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 + F+ NF + K++ + H H + E + G ++ V ++ D + Sbjct: 11 KNFSDFNFELLYITKSKFENDWHSTAHIHPFMEIFFITEGNGSFQLEDSTVNVKEYDLII 70 Query: 74 IPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS--------QVYRTNNAF 125 I H + + + + F ++ L F S + + ++ Sbjct: 71 INPNCLHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHVINLKKNSSII 130 Query: 126 LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQWLKS----TVEKM 181 L + +I + + E + + I + I + + ++ Sbjct: 131 LNQLNLIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKNLNLECAKIKNY 190 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 D LE + LS ++ L A + G +P+ + E RI AK LE TNYS+ Sbjct: 191 LDSHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEAKSLLETTNYSI 250 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 DI G+S+ S F + FKK T+ +PK Y+ + + + Sbjct: 251 KDIGSIVGFSNSSYFSQMFKKQTNLSPKQYKVNMIKNPK 289 >UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KK32_CLOPH Length = 295 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 97/292 (33%), Gaps = 23/292 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEIN 60 + +E + F I + S H H E TL++ G +N Sbjct: 1 MQIITNKFHKEMKEHGNDQFPFLISYERLSKYESGSFLWHWHPEIELTLIVKGDMIYTVN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILNVGISKRFFEQHYLPLLPYCFV----- 114 + L G+ +F + S H + +E +++ + + + +V Sbjct: 61 DHPLHLHEGEALFGNVSSFHTGTKFENKDCEYISITFDPKLIYGYENSITYRKYVEPITQ 120 Query: 115 --------ASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREE-- 164 +N + ++ +I+ +E E + M + L + Sbjct: 121 NFSLSAIQLDYSEEWHNNIIEIIKEIIAIGQNKEASYELDILMRLQQLWKILYLHNNSAP 180 Query: 165 --QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 D ++ D + LE + + R +RY + + I Sbjct: 181 AMTPYDKRNYDRIRSILSYVDNNYAMKLTLEEIAEHIHLCKSECCRLFKRYMKVSLFEFI 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + RI + L + YS+ +IA G++ + + K F K+ +P YRKK Sbjct: 241 LQYRIEKSLNYLADSQYSIIEIANFVGFNDSNYYSKVFTKIKGCSPTKYRKK 292 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 96/253 (37%), Gaps = 9/253 (3%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE-F 86 + + + S H H + E VL G + + + + + + I H + Sbjct: 10 YSKYEQDWESYPHTHYFSELFYVLNGCGSFIVEEESFPIRKQNLIIINPSIRHTEVSDKN 69 Query: 87 GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEL 146 + +G+ Y + + + N F Y T++ ++ ++ E + Sbjct: 70 SPLEYIVLGVEG--LNFLIYNDKEYLNIQCEDFSENLDF--YFHTILREMDEQKESYETI 125 Query: 147 VEMVTFYVINRLRHYR----EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 + + +I +L + E S ++ D L+ + L+ + Sbjct: 126 CQNLLEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENITLDTLAELTHLN 185 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + Y YG PM + + RI +++ L T+ + IA + G+SS S F + F+K Sbjct: 186 KYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFSSSSYFSQCFRK 245 Query: 263 LTSFTPKSYRKKL 275 + TP +YRK+ Sbjct: 246 ICGMTPTAYRKQF 258 >UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D21 RepID=C0WDW3_9FIRM Length = 311 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 103/288 (35%), Gaps = 12/288 (4%) Query: 4 PVINAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQE 58 A+E+ ++ + ++ +H H + V G Sbjct: 17 VQYRISTTENAQEEIWYSQNEIPIAMFTQRYQPHLGDHIPIHWHQEMQLLWVYDGTLSYR 76 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF-----EQHYLPLLPYCF 113 +NG L+R +FI H S + L + K F Q PL + Sbjct: 77 VNGMEFPLDRSQLLFINDSILHSSHPITTEVKTLCINFRKDIFPSALWNQFLRPLTENPY 136 Query: 114 VASQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDVPQW 173 ++ N L + I ++ TGL + + + + + E + + Sbjct: 137 CTYELINLNAQSLEKLGRFIHHVDD-STGLFSVTTFIMEVMEEIMETFEESGEAKNTEER 195 Query: 174 LK-STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 + + + + + ++ LT Q+Y G P+ +N R++ A+ Sbjct: 196 VLFDGILSFIKDHFSESLTISQLSTAAHLNKNKLTALFQKYTGMPPIHFLNTYRLDEART 255 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 QL + SV++I+ + GY S FI+ F+K TP YR+ + ++ Sbjct: 256 QLLKSARSVSEISEDVGYGQISHFIQQFRKRYGMTPLQYRRTYSGRDE 303 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 101/264 (38%), Gaps = 12/264 (4%) Query: 18 QLFNGKNFHVF-IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKR-VLLERGDFVFIP 75 + FN + ++F + ++ES +H HD+ E +++L G + + G + Sbjct: 7 RTFNPEIIYLFDPWTQSESHGEMHHHDFLEISVLLEGESTYYFEKEPAKKIRAGSVMLFN 66 Query: 76 LGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVIS 134 G H G + L++G+ E P ++ + ++ L ++ Sbjct: 67 PGVDHCELQPKGTRSHQLHIGLKNISLEGFKRNFFPNKHPLLELGKYHHQVLEKAWQLVR 126 Query: 135 SLNFRETGLEELVEMVTFYVINRLRHYREEQVID-----DVPQWLKSTVE----KMHDKE 185 + + + + V ++ + E I+ Q + + + Sbjct: 127 ESSEERDEFQLMQKAVLMEMLVYILRGLNEDHINVLPYLSKSQRRQQQIVNYTVYYLENH 186 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 E LE + S YL++ + G +P+ + EIR+ AK L+ N ++ ++A Sbjct: 187 YKEEITLEKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNENLTIKEVA 246 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPK 269 GY F K+FKKL +P Sbjct: 247 SAVGYQDAYHFSKSFKKLYGVSPS 270 >UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQS2_9FIRM Length = 291 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 90/260 (34%), Gaps = 16/260 (6%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 +N + LH H E + Y + + + L+ D +FI G H Sbjct: 23 YHNNSAEDFPLHWHVPGEIICPIQNTYNVTVADEILYLKPHDILFIGSGELHSITAPKEG 82 Query: 89 TRILNVGISKRFFEQH------YLPLLPYCFVASQVYRT-NNAFLTYVETVISSLNFRET 141 R + + S FEQ + L P+ + Q N+ L + + Sbjct: 83 ERYI-LNFSTAMFEQFHELALFFAALHPFRLLRYQDQPQFNDQLLALMTRMEKEYFGAAV 141 Query: 142 GLEELVEMVTFYVINRLRHYREEQVIDD--------VPQWLKSTVEKMHDKEQFSESALE 193 + + + + + + + Q S + + + +L+ Sbjct: 142 FRDCELSSLMLHFFAVIGRKLHQNAPHENISPLRQKEQQERFSMLCNYINAHCTEDLSLD 201 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + + S+ + R + G T + R+ FAK L + +T++A +G++S Sbjct: 202 ELANEAGFSKYHFARLFKEITGTTCHNYLLGRRLLFAKTLLADFSLPITEVAMRSGFNSL 261 Query: 254 SLFIKTFKKLTSFTPKSYRK 273 + F + FK TP +RK Sbjct: 262 ATFNRIFKFQIGCTPSEFRK 281 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 106/291 (36%), Gaps = 13/291 (4%) Query: 1 MMQPVINA-PEIATAREQQLFNGKNFHVFIYNK-TESISGLHQHDYYEFTLVLTGRYFQE 58 M Q + NA + + F V I + ++ H HD++E +V G Sbjct: 1 MRQVLQNAGAMMTVLQGIDFFPSGAASVTIEPRLPQAAFPEHHHDFWEIVIVEHGTGTHV 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFE-----QHYLPLLPYCF 113 NG+ L G F+ H + + S + F + LP Sbjct: 61 FNGQPYTLSGGSVCFVRDHDRHLYEHTENLCLTNVLYRSPQAFSFLSGLEKLLPQEQDGH 120 Query: 114 VASQVYRTNNAFLTYVETVISSLNFRETGLE----ELVEMVTFYVINRLRHYREEQVIDD 169 +R + L ++ L + +EM+ ++ LR + Q Sbjct: 121 Y-PSHWRVSQQTLHQASPLVERLEALRECSDVHAVASMEMLFMQLLILLRSGSQMQGGGH 179 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + L + + + E E + S L R ++ G TP + +N +R+ Sbjct: 180 ADERL-NQLIAWLEDHYAEEVCWEQLADKHMLSLRTLHRQLKQRTGLTPQRYLNRLRLMK 238 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 A+ L + SVTDIA++ G+ + F F++ S++P+ R+ E Q Sbjct: 239 ARYLLRHSEESVTDIAYQCGFGDSNHFSTLFRREFSWSPRDIRQGRDEQMQ 289 >UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8S1Q1_9CLOT Length = 322 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 92/262 (35%), Gaps = 24/262 (9%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVG 95 H H+Y E + G ++G+ + L+ G+ +F+ + + +N Sbjct: 61 HFPEHTHNYVEVIYMCRGETTHVVDGRELKLKEGELLFLNQHAVQEIQPAGQDDIAVNFI 120 Query: 96 ISKRFFEQHYL------------------PLLPYCFVASQVYRTNNAFLTYVETVISSLN 137 I FF+ + Y VE ++ SL Sbjct: 121 ILPEFFDTAFRMMGEEENLLRDFIVGCLCDDTRYGRYLHFQIADVLPVQNLVENLVWSLM 180 Query: 138 FRETGLEELVEMVTFYVINRLRHYR-----EEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 G++ + + ++ L HY Q L V + D+ +L Sbjct: 181 HEREGMQAMNQTTMGLLLRHLMHYTGRIRVNRDSEQSFEQQLTLQVLRYIDEHYRE-GSL 239 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + AL +L+RA R G+ +++ R+N A L T V D++F GY + Sbjct: 240 TELAALMGYDVYWLSRAINRLLGRNYKELLQIKRLNQAAFLLHSTRMPVADVSFAVGYDN 299 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S F + F+ +PK YRK Sbjct: 300 TSYFYRIFRTYYGMSPKEYRKN 321 >UniRef50_C0EI59 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EI59_9CLOT Length = 325 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 102/283 (36%), Gaps = 26/283 (9%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 + F ++F V ++ T + H+H+++E V G ++ + +++GD + Sbjct: 38 YLRAFQNRDFAVSMHTNT-FQNPPHRHEFFELVYVHRGSCTNFVDSAEICMKQGDICLLN 96 Query: 76 LGSHHQSFYEF-GATRILNVGISKRFFEQHYLPLLPY-------------------CFVA 115 + H + I N+ I + ++ + ++ Sbjct: 97 TNAEHTLKLDNIERDTIFNLLIRRSMMDRFDFKVFSSEDFVANFFLKSIQKQREEKNYLL 156 Query: 116 SQVYRTNNAFLTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQV----IDDVP 171 ++ + +I + E + + ++ L + ++ Sbjct: 157 FPQSEETAEQISLFQKIIQEFYDDKCYKETKISHLFDCLMIELVRSYKVEIDVRYPGSGE 216 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 S + K + LE++ + L+R ++ G + + +IR+ A Sbjct: 217 NQKFSDLVKYIGEN-SDSVTLESLARQFNYHPQSLSRIIKQQTGSSFQKFFTDIRLEQAA 275 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + L ++ V +I + GYS+ + F K F++ +P YRKK Sbjct: 276 RLLCESSEPVAEIIRKVGYSNRTWFNKMFQQKFGVSPGEYRKK 318 >UniRef50_C6I5T7 AraC family transcriptional regulator n=18 Tax=root RepID=C6I5T7_9BACE Length = 297 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 104/295 (35%), Gaps = 20/295 (6%) Query: 6 INAPEIATAREQQLFNGKN-FHVFIYNKTESISGLHQHDYYEFTLVLTGRY-FQEINGKR 63 +NA + RE + K+ F++ KTE +H H +E + + Sbjct: 1 MNALQSNIIREITPLSDKDCFYIAERYKTEFTYPIHNHAEFELNFTEKAAGVRRIVGDSA 60 Query: 64 VLLERGDFVFIPLGSH-HQSFYEF---GATRILNVGISKRFFEQHYLPLLPYCFVASQVY 119 ++ D V I H R + + S F + ++ + + + Sbjct: 61 EVISDYDLVLITGKDLEHVWEQHDCHSKEIREITIQFSSDLFFKSFINKNQFDSIRDMLE 120 Query: 120 RTNNAF------LTYVETVISSLNFRETGLEELVEMVTFYVINRLRHYREEQVIDDV--- 170 + + + ++ +L + G +++ +T L + + Sbjct: 121 KAQKGLCFPMSAILKIYPLLDTLASEKQGFYAVIKFLTILYELSLFNEEARTLSSSSFAK 180 Query: 171 -----PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 V++ + E L + + + +R + GK I +I Sbjct: 181 IGIHSDSRRVQKVQEYINAHYQEEIRLNQLADMVGMTPVSFSRFFKLRTGKNLSDYIIDI 240 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 R+ FA + L + S+ +I +E G+++ S F + FKK +PK +R+ + + Sbjct: 241 RLGFAARLLVDSTMSIAEICYECGFNNLSNFNRIFKKKKECSPKEFRENYRKKKK 295 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 17/255 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILN---VGI 96 H H+ YE ++ G + K GD + H + + N + I Sbjct: 32 HFHNQYEIFYIIEGERQFFFDNKSYNAYAGDIAILDTNLVHTTCSISDEDKGYNRVILYI 91 Query: 97 SKRF---FEQHY--LPLLPYCFVASQVYRTNNA----FLTYVETVISSLNFRETGLEELV 147 F++ Y L L+ Y +Y N FL + L + +G + V Sbjct: 92 DYEKMCDFDKKYPGLNLVNYFHNNYGIYHLNEDQRIAFLNLYRDLRHELTKKNSGYQSRV 151 Query: 148 EMVTFYVINRLRHYREEQV-----IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 E+ T Y + +L + + I+ + S + + E AL+ + S Sbjct: 152 EIATIYWLYKLLSLKHDSTQIHAVINSPKELSASNISAYLEANYTKELALDTISDELFMS 211 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + Y+ R + Y G T + +N +RI A + LE +N S++D+A E G+ S S F + FKK Sbjct: 212 KYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSNLSISDVAAELGFESASYFERIFKK 271 Query: 263 LTSFTPKSYRKKLTE 277 + + TP YRK Sbjct: 272 IMTVTPLKYRKTHQS 286 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.175 0.548 Lambda K H 0.267 0.0537 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,980,187,477 Number of Sequences: 3077464 Number of extensions: 119378663 Number of successful extensions: 408456 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 19798 Number of HSP's successfully gapped in prelim test: 2905 Number of HSP's that attempted gapping in prelim test: 350110 Number of HSP's gapped (non-prelim): 29651 length of query: 280 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 153 effective length of database: 649,558,428 effective search space: 99382439484 effective search space used: 99382439484 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.0 bits)