BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (129 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A201 Curli production assembly/transport component cs... 242 3e-63 UniRef50_B1J8A4 Curli fiber operon CsgE n=6 Tax=Pseudomonas RepI... 78 7e-14 UniRef50_A4VNF2 Curli fiber protein CsgE, putative n=1 Tax=Pseud... 66 3e-10 UniRef50_C9QFY8 Curli production assembly/transport component Cs... 62 4e-09 UniRef50_A6CUM5 CsgE-like protein n=2 Tax=Vibrio RepID=A6CUM5_9VIBR 59 6e-08 UniRef50_A9DHI1 CsgE-like protein n=3 Tax=Shewanella RepID=A9DHI... 57 2e-07 UniRef50_B6ENC3 Assembly/transport component in curli production... 56 5e-07 UniRef50_Q5E244 Curli production assembly/transport component Cs... 55 7e-07 UniRef50_Q084E6 Putative uncharacterized protein n=1 Tax=Shewane... 54 2e-06 UniRef50_Q3ID62 Curli production assembly/transport component n=... 51 1e-05 UniRef50_Q392B9 Putative uncharacterized protein n=1 Tax=Burkhol... 50 2e-05 UniRef50_B4RW65 Curli production assembly/transport component n=... 50 3e-05 UniRef50_A5KYB1 CsgE-like protein n=1 Tax=Vibrionales bacterium ... 46 3e-04 UniRef50_C6X5S3 Putative uncharacterized protein n=1 Tax=Flavoba... 42 0.006 UniRef50_Q5QXH0 Curli production assembly/transport component, C... 41 0.010 UniRef50_A3LVP5 Predicted protein n=1 Tax=Pichia stipitis RepID=... 41 0.011 >UniRef50_P0A201 Curli production assembly/transport component csgE n=94 Tax=Enterobacteriaceae RepID=CSGE_SALTI Length = 131 Score = 242 bits (617), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 118/131 (90%), Positives = 122/131 (93%), Gaps = 2/131 (1%) Query: 1 MKRYLRWIVAAEFLFAAGNLHA--VEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGN 58 MKRYL WIVAAE LFA GNLHA VEVEVPGLLTDHTVSSIGH+FYRAFSDKWES+YTGN Sbjct: 1 MKRYLTWIVAAELLFATGNLHANEVEVEVPGLLTDHTVSSIGHEFYRAFSDKWESEYTGN 60 Query: 59 LTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQAL 118 LTINERPSARWGSWITITVNQDVIFQTFLFP+KRDFEKTVVFAL QTEEALNRRQI+Q L Sbjct: 61 LTINERPSARWGSWITITVNQDVIFQTFLFPMKRDFEKTVVFALAQTEEALNRRQIDQTL 120 Query: 119 LSTGDLAHDEF 129 LST DLA DEF Sbjct: 121 LSTSDLARDEF 131 >UniRef50_B1J8A4 Curli fiber operon CsgE n=6 Tax=Pseudomonas RepID=B1J8A4_PSEPW Length = 135 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Query: 24 EVEVPGLLTDHTVSSIGHDFYRAFSDKWE--SDYTGNLTINERPSARWGSWITITVNQDV 81 E E+ G + D+T+S IGHDFY F+D+ S NL + ERP ARWGS IT+ +DV Sbjct: 28 EDEMKGFIVDNTISHIGHDFYAYFADRLRATSRLDFNLVVRERPDARWGSLITVEFERDV 87 Query: 82 IFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 +++ FL P ++ V A ++ + +R++ + L T DL DE Sbjct: 88 LYRRFLPPNVTQLKEEAVAAADLVKQEVIQRKLQRLLQDTTDLERDEL 135 >UniRef50_A4VNF2 Curli fiber protein CsgE, putative n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VNF2_PSEU5 Length = 127 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 2/111 (1%) Query: 21 HAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWE--SDYTGNLTINERPSARWGSWITITVN 78 A E E+ G +T++T+S GH+FY F ++ S NL I ERPSARWG + + Sbjct: 17 QADEAELQGFITNNTISRSGHEFYLRFCERLNDISSLDFNLAIKERPSARWGVLVWVEHE 76 Query: 79 QDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 +++ FL P D ++ A E +NRR+I D+A DE Sbjct: 77 NQTLYRRFLQPNVADMKEPAYEAADFVVEEINRRKIEALFEDNIDMAKDEL 127 >UniRef50_C9QFY8 Curli production assembly/transport component CsgE n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QFY8_VIBOR Length = 153 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 3/112 (2%) Query: 21 HAVEVEVPGLLTDHTVSSIGHDFYRAFS---DKWESDYTGNLTINERPSARWGSWITITV 77 H +E EV GLL D T++ +G DFY F+ ++ NLT+ ERP+A GS I+I Sbjct: 42 HLLENEVDGLLIDRTMTRLGDDFYFFFTQLMNERHGSLKENLTVKERPTALSGSIISIFH 101 Query: 78 NQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 + +I++T L P ++ E AL L R + + T DLA DEF Sbjct: 102 REKLIYRTALSPGRQHAEDKAKQALTAVTSHLLRWKTQLSYQDTFDLAQDEF 153 >UniRef50_A6CUM5 CsgE-like protein n=2 Tax=Vibrio RepID=A6CUM5_9VIBR Length = 164 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 3/107 (2%) Query: 26 EVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVNQDVI 82 EV G++ D T++ +G DFY FS + Y NLTI E P+A GS I + ++ I Sbjct: 58 EVSGVIVDRTITRLGEDFYFFFSQQLNDRYPDLKENLTIKEIPTALSGSIIEVYHSRKAI 117 Query: 83 FQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 ++T L P +R + AL + R Q + + T DL HDEF Sbjct: 118 YRTALSPGRRQAKDRANDALQVVGNYIIRWQAERLYMDTFDLEHDEF 164 >UniRef50_A9DHI1 CsgE-like protein n=3 Tax=Shewanella RepID=A9DHI1_9GAMM Length = 146 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 8/110 (7%) Query: 27 VPGLLTDHTVSSIGHDFYRAFSDKWE-----SDYTGNLTINERPSARWGSWITITVNQDV 81 V GL+ + ++ +GH FYR F + S ++G L+I ER +AR GS ITI N+ Sbjct: 38 VDGLILNRAMTRVGHRFYREFVLAYRDIGGISSHSG-LSIVERATARSGSKITILHNRKP 96 Query: 82 IFQTFLFPLKRDFEKTVVFALIQTEEAL--NRRQINQALLSTGDLAHDEF 129 I+ T + P+ R+ + A + + L N++Q + A DLA DEF Sbjct: 97 IYITVVSPVSRNIDDQAAAAASRVNQTLRQNKKQASWAQFLDPDLAPDEF 146 >UniRef50_B6ENC3 Assembly/transport component in curli production, CsgE n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ENC3_ALISL Length = 153 Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 7/90 (7%) Query: 25 VEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVNQDV 81 VE+ GL+ D T++ +G DFY +FS K S Y NLT+ ERP+A GS I + V Sbjct: 46 VEIDGLIIDRTLTRLGKDFYFSFSIKMNSKYDDLGVNLTVKERPTALSGSIIGVYHFDKV 105 Query: 82 IFQTFLFPLKRDFEKTVVFALIQTEEALNR 111 I++ L P +R E+ Q EA+N+ Sbjct: 106 IYRGALSPGQRQAEEKAE----QAVEAVNQ 131 >UniRef50_Q5E244 Curli production assembly/transport component CsgE n=2 Tax=Vibrio fischeri RepID=Q5E244_VIBF1 Length = 150 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%) Query: 25 VEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVNQDV 81 +E+ GL+ D T++ +G DFY +FS K + Y NLTI ERP+A GS I + V Sbjct: 43 IELDGLIIDRTLTRLGRDFYFSFSMKMNARYEDIDVNLTIKERPTALSGSIIGVYHFDKV 102 Query: 82 IFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDE 128 I+++ L P +R ++ AL + + + Q + T DL + E Sbjct: 103 IYRSALSPGQRQADEKAEQALEAVNKYIVKWQTEKLFKDTFDLDYPE 149 >UniRef50_Q084E6 Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q084E6_SHEFN Length = 181 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 8/110 (7%) Query: 27 VPGLLTDHTVSSIGHDFYRAFSDKWE-----SDYTGNLTINERPSARWGSWITITVNQDV 81 + GL+ + ++ GH FYR F + S+++G LT+ E+ +AR GS I + N+ Sbjct: 73 IDGLILNRAMTRFGHRFYREFVSAYRDINGMSNHSG-LTVVEQATARSGSKILVLHNRKP 131 Query: 82 IFQTFLFPLKRDFEKTVVFALIQTEEAL--NRRQINQALLSTGDLAHDEF 129 +F TFL P R+ + A + +L ++Q A S DLA DEF Sbjct: 132 VFVTFLSPASRNIDAQANMAAKRVNASLLQYQQQAKWAAFSDPDLAPDEF 181 >UniRef50_Q3ID62 Curli production assembly/transport component n=3 Tax=Alteromonadales RepID=Q3ID62_PSEHT Length = 133 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 7/102 (6%) Query: 4 YLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWE---SDYTGNLT 60 Y+ ++++ F+ E+E+ GLL D ++S GH FY FS+ W S N+ Sbjct: 8 YISYLLSVLLCFSPAAFANDELEIDGLLLDRSISRFGHQFYYKFSNYWRDLPSTAGFNIE 67 Query: 61 INERPSARWGSWITITVNQDVIFQTFLF----PLKRDFEKTV 98 I E + G+ +++ +N +I+ T+L PL E+ V Sbjct: 68 IKETVLPKAGTRLSLIMNNQLIYATYLGRRLEPLDERVEQAV 109 >UniRef50_Q392B9 Putative uncharacterized protein n=1 Tax=Burkholderia sp. 383 RepID=Q392B9_BURS3 Length = 201 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Query: 24 EVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGN---LTINERPSARWGSWITITVNQD 80 E ++ G +T V+ G DFY FS W + I+ERPS R+GS I + Q Sbjct: 93 EDQLGGTVTTDAVTLAGRDFYTYFSQTWSEIPLSERYMVAIHERPSGRYGSLIWVEFQQK 152 Query: 81 VIFQTFLFPLKRDFEKTVVFALIQTE-EALNRRQINQALLSTGDLAHDEF 129 +FQTFL P+ R K V + + + + ++ L DLA DE Sbjct: 153 RVFQTFL-PIARANVKAVAESAANISFQTVIQDDLSNLLFPDSDLAKDEI 201 >UniRef50_B4RW65 Curli production assembly/transport component n=2 Tax=Alteromonas macleodii RepID=B4RW65_ALTMD Length = 130 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 14/116 (12%) Query: 20 LHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWE--SDYTG-NLTINERPSARWGSWITIT 76 +HA E+ + GLL D+++S GH+F S W D +G NL + E + G+ +++ Sbjct: 21 IHAEEIRLGGLLLDNSISRQGHEFASKISQYWREVPDSSGKNLVVKEIIVPQAGTLLSVV 80 Query: 77 VNQDVIFQTFL----FPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDE 128 + V++QT++ PL ++ +V L +A+ I+ + DLA DE Sbjct: 81 YDNKVVYQTYMGRRQVPLDEKVQQAIVLVL----DAVANASIDS---RSPDLAGDE 129 >UniRef50_A5KYB1 CsgE-like protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KYB1_9GAMM Length = 135 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Query: 26 EVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVNQDVI 82 EV G++ D T++ +G DFY FS Y NLT+ ERP+A GS I + N+ + Sbjct: 56 EVNGIIVDRTITRLGDDFYFFFSQSLNESYPDLKENLTVKERPTALSGSIIEVLENRSSV 115 >UniRef50_C6X5S3 Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5S3_FLAB3 Length = 240 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Query: 25 VEVPGLLTDHTVSSIGHDFYRAFSDKWES---DYTGNLTINERPSARWGSWITITVNQDV 81 +E+ GL D T + G FY F K+ Y G +T++E PS S I+++++ V Sbjct: 141 IELSGLTIDDTKTRFGQQFYETFFKKYNQLPQKYEGTVTVSELPSMGRNSRISVSLDDQV 200 Query: 82 IFQTFL 87 I+ TF+ Sbjct: 201 IY-TFI 205 >UniRef50_Q5QXH0 Curli production assembly/transport component, CsgE n=1 Tax=Idiomarina loihiensis RepID=Q5QXH0_IDILO Length = 125 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Query: 21 HAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGN---LTINERPSARWGSWITITV 77 A E+E+ G++ D T+S G DF+ ++ W + N + I+E+ + G+++ + + Sbjct: 17 QADEIELGGMVLDRTISRFGKDFFFYYTSYWRDIPSTNGITVVIHEQVYPQAGTYLWVEM 76 Query: 78 NQDVIFQTFLFPLKRDFEKTVVFALI 103 Q IFQT+ + D +K A++ Sbjct: 77 EQTKIFQTYFGRRQNDVKKMAEKAIL 102 >UniRef50_A3LVP5 Predicted protein n=1 Tax=Pichia stipitis RepID=A3LVP5_PICST Length = 581 Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 19/107 (17%) Query: 24 EVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLTINERPSARWGSWITITVNQDVIF 83 E+ + +L D SIG FY F + +DY ++ + RW I +D+IF Sbjct: 126 ELSMKDVLKDDHRVSIGKAFYNYFRKSFPADYNITEEEKDKKATRWALEI-----EDIIF 180 Query: 84 QTF------------LFPLKRDFEKTVVFALIQTEEALNR--RQINQ 116 +T+ LF LK+ F K ++ I + +N+ ++INQ Sbjct: 181 RTYSGKQYISEGRRILFLLKKYFMKDIIAGTITLSDVVNKTPKEINQ 227 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A201 Curli production assembly/transport component cs... 176 2e-43 UniRef50_A6CUM5 CsgE-like protein n=2 Tax=Vibrio RepID=A6CUM5_9VIBR 144 7e-34 UniRef50_C9QFY8 Curli production assembly/transport component Cs... 143 2e-33 UniRef50_A4VNF2 Curli fiber protein CsgE, putative n=1 Tax=Pseud... 134 8e-31 UniRef50_Q5E244 Curli production assembly/transport component Cs... 134 9e-31 UniRef50_B6ENC3 Assembly/transport component in curli production... 134 1e-30 UniRef50_B1J8A4 Curli fiber operon CsgE n=6 Tax=Pseudomonas RepI... 130 2e-29 UniRef50_Q3ID62 Curli production assembly/transport component n=... 125 3e-28 UniRef50_A9DHI1 CsgE-like protein n=3 Tax=Shewanella RepID=A9DHI... 118 6e-26 UniRef50_Q084E6 Putative uncharacterized protein n=1 Tax=Shewane... 116 2e-25 UniRef50_Q392B9 Putative uncharacterized protein n=1 Tax=Burkhol... 115 3e-25 UniRef50_B4RW65 Curli production assembly/transport component n=... 109 4e-23 UniRef50_A5KYB1 CsgE-like protein n=1 Tax=Vibrionales bacterium ... 86 3e-16 Sequences not found previously or not previously below threshold: UniRef50_Q5QXH0 Curli production assembly/transport component, C... 87 1e-16 UniRef50_A1S9K5 Curli production assembly/transport component Cs... 78 7e-14 UniRef50_A0L0B0 Curli production assembly/transport component Cs... 78 7e-14 UniRef50_C6X5S3 Putative uncharacterized protein n=1 Tax=Flavoba... 58 1e-07 UniRef50_Q26FL8 Putative uncharacterized protein n=1 Tax=Flavoba... 49 3e-05 UniRef50_A5FHE6 Putative uncharacterized protein n=1 Tax=Flavoba... 44 0.001 UniRef50_C2G2I8 Putative uncharacterized protein n=2 Tax=Sphingo... 44 0.002 UniRef50_D2QT93 Putative uncharacterized protein n=1 Tax=Spiroso... 43 0.003 UniRef50_A2TUP3 Putative uncharacterized protein n=1 Tax=Dokdoni... 41 0.014 >UniRef50_P0A201 Curli production assembly/transport component csgE n=94 Tax=Enterobacteriaceae RepID=CSGE_SALTI Length = 131 Score = 176 bits (446), Expect = 2e-43, Method: Composition-based stats. Identities = 118/131 (90%), Positives = 122/131 (93%), Gaps = 2/131 (1%) Query: 1 MKRYLRWIVAAEFLFAAGNLHA--VEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGN 58 MKRYL WIVAAE LFA GNLHA VEVEVPGLLTDHTVSSIGH+FYRAFSDKWES+YTGN Sbjct: 1 MKRYLTWIVAAELLFATGNLHANEVEVEVPGLLTDHTVSSIGHEFYRAFSDKWESEYTGN 60 Query: 59 LTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQAL 118 LTINERPSARWGSWITITVNQDVIFQTFLFP+KRDFEKTVVFAL QTEEALNRRQI+Q L Sbjct: 61 LTINERPSARWGSWITITVNQDVIFQTFLFPMKRDFEKTVVFALAQTEEALNRRQIDQTL 120 Query: 119 LSTGDLAHDEF 129 LST DLA DEF Sbjct: 121 LSTSDLARDEF 131 >UniRef50_A6CUM5 CsgE-like protein n=2 Tax=Vibrio RepID=A6CUM5_9VIBR Length = 164 Score = 144 bits (364), Expect = 7e-34, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 3/111 (2%) Query: 22 AVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVN 78 EV G++ D T++ +G DFY FS + Y NLTI E P+A GS I + + Sbjct: 54 NDFSEVSGVIVDRTITRLGEDFYFFFSQQLNDRYPDLKENLTIKEIPTALSGSIIEVYHS 113 Query: 79 QDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 + I++T L P +R + AL + R Q + + T DL HDEF Sbjct: 114 RKAIYRTALSPGRRQAKDRANDALQVVGNYIIRWQAERLYMDTFDLEHDEF 164 >UniRef50_C9QFY8 Curli production assembly/transport component CsgE n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QFY8_VIBOR Length = 153 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 3/112 (2%) Query: 21 HAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITV 77 H +E EV GLL D T++ +G DFY F+ + NLT+ ERP+A GS I+I Sbjct: 42 HLLENEVDGLLIDRTMTRLGDDFYFFFTQLMNERHGSLKENLTVKERPTALSGSIISIFH 101 Query: 78 NQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 + +I++T L P ++ E AL L R + + T DLA DEF Sbjct: 102 REKLIYRTALSPGRQHAEDKAKQALTAVTSHLLRWKTQLSYQDTFDLAQDEF 153 >UniRef50_A4VNF2 Curli fiber protein CsgE, putative n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VNF2_PSEU5 Length = 127 Score = 134 bits (338), Expect = 8e-31, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 2/111 (1%) Query: 21 HAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWE--SDYTGNLTINERPSARWGSWITITVN 78 A E E+ G +T++T+S GH+FY F ++ S NL I ERPSARWG + + Sbjct: 17 QADEAELQGFITNNTISRSGHEFYLRFCERLNDISSLDFNLAIKERPSARWGVLVWVEHE 76 Query: 79 QDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 +++ FL P D ++ A E +NRR+I D+A DE Sbjct: 77 NQTLYRRFLQPNVADMKEPAYEAADFVVEEINRRKIEALFEDNIDMAKDEL 127 >UniRef50_Q5E244 Curli production assembly/transport component CsgE n=2 Tax=Vibrio fischeri RepID=Q5E244_VIBF1 Length = 150 Score = 134 bits (337), Expect = 9e-31, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 3/110 (2%) Query: 23 VEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVNQ 79 +E+ GL+ D T++ +G DFY +FS K + Y NLTI ERP+A GS I + Sbjct: 41 DLIELDGLIIDRTLTRLGRDFYFSFSMKMNARYEDIDVNLTIKERPTALSGSIIGVYHFD 100 Query: 80 DVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 VI+++ L P +R ++ AL + + + Q + T DL + E Sbjct: 101 KVIYRSALSPGQRQADEKAEQALEAVNKYIVKWQTEKLFKDTFDLDYPEI 150 >UniRef50_B6ENC3 Assembly/transport component in curli production, CsgE n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ENC3_ALISL Length = 153 Score = 134 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Query: 23 VEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVNQ 79 VE+ GL+ D T++ +G DFY +FS K S Y NLT+ ERP+A GS I + Sbjct: 44 DLVEIDGLIIDRTLTRLGKDFYFSFSIKMNSKYDDLGVNLTVKERPTALSGSIIGVYHFD 103 Query: 80 DVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 VI++ L P +R E+ A+ + + + Q + T DL E Sbjct: 104 KVIYRGALSPGQRQAEEKAEQAVEAVNQYIVKWQTEKLFKDTYDLDFPEI 153 >UniRef50_B1J8A4 Curli fiber operon CsgE n=6 Tax=Pseudomonas RepID=B1J8A4_PSEPW Length = 135 Score = 130 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Query: 24 EVEVPGLLTDHTVSSIGHDFYRAFSDKWE--SDYTGNLTINERPSARWGSWITITVNQDV 81 E E+ G + D+T+S IGHDFY F+D+ S NL + ERP ARWGS IT+ +DV Sbjct: 28 EDEMKGFIVDNTISHIGHDFYAYFADRLRATSRLDFNLVVRERPDARWGSLITVEFERDV 87 Query: 82 IFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 +++ FL P ++ V A ++ + +R++ + L T DL DE Sbjct: 88 LYRRFLPPNVTQLKEEAVAAADLVKQEVIQRKLQRLLQDTTDLERDEL 135 >UniRef50_Q3ID62 Curli production assembly/transport component n=3 Tax=Alteromonadales RepID=Q3ID62_PSEHT Length = 133 Score = 125 bits (315), Expect = 3e-28, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 6/125 (4%) Query: 4 YLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWE---SDYTGNLT 60 Y+ ++++ F+ E+E+ GLL D ++S GH FY FS+ W S N+ Sbjct: 8 YISYLLSVLLCFSPAAFANDELEIDGLLLDRSISRFGHQFYYKFSNYWRDLPSTAGFNIE 67 Query: 61 INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS 120 I E + G+ +++ +N +I+ T+L ++ V A+ +A+ R + +S Sbjct: 68 IKETVLPKAGTRLSLIMNNQLIYATYLGRRLEPLDERVEQAVYIVIDAMAR---SNMAVS 124 Query: 121 TGDLA 125 + D+A Sbjct: 125 SPDMA 129 >UniRef50_A9DHI1 CsgE-like protein n=3 Tax=Shewanella RepID=A9DHI1_9GAMM Length = 146 Score = 118 bits (295), Expect = 6e-26, Method: Composition-based stats. Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 6/109 (5%) Query: 27 VPGLLTDHTVSSIGHDFYRAFSDKWES----DYTGNLTINERPSARWGSWITITVNQDVI 82 V GL+ + ++ +GH FYR F + L+I ER +AR GS ITI N+ I Sbjct: 38 VDGLILNRAMTRVGHRFYREFVLAYRDIGGISSHSGLSIVERATARSGSKITILHNRKPI 97 Query: 83 FQTFLFPLKRDFEKTVVFALIQTEEAL--NRRQINQALLSTGDLAHDEF 129 + T + P+ R+ + A + + L N++Q + A DLA DEF Sbjct: 98 YITVVSPVSRNIDDQAAAAASRVNQTLRQNKKQASWAQFLDPDLAPDEF 146 >UniRef50_Q084E6 Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q084E6_SHEFN Length = 181 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 8/110 (7%) Query: 27 VPGLLTDHTVSSIGHDFYRAFSDKWE-----SDYTGNLTINERPSARWGSWITITVNQDV 81 + GL+ + ++ GH FYR F + S+++G LT+ E+ +AR GS I + N+ Sbjct: 73 IDGLILNRAMTRFGHRFYREFVSAYRDINGMSNHSG-LTVVEQATARSGSKILVLHNRKP 131 Query: 82 IFQTFLFPLKRDFEKTVVFALIQTEEAL--NRRQINQALLSTGDLAHDEF 129 +F TFL P R+ + A + +L ++Q A S DLA DEF Sbjct: 132 VFVTFLSPASRNIDAQANMAAKRVNASLLQYQQQAKWAAFSDPDLAPDEF 181 >UniRef50_Q392B9 Putative uncharacterized protein n=1 Tax=Burkholderia sp. 383 RepID=Q392B9_BURS3 Length = 201 Score = 115 bits (289), Expect = 3e-25, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Query: 24 EVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGN---LTINERPSARWGSWITITVNQD 80 E ++ G +T V+ G DFY FS W + I+ERPS R+GS I + Q Sbjct: 93 EDQLGGTVTTDAVTLAGRDFYTYFSQTWSEIPLSERYMVAIHERPSGRYGSLIWVEFQQK 152 Query: 81 VIFQTFLFPLKRDFEKTVVFALIQTE-EALNRRQINQALLSTGDLAHDEF 129 +FQTFL P+ R K V + + + + ++ L DLA DE Sbjct: 153 RVFQTFL-PIARANVKAVAESAANISFQTVIQDDLSNLLFPDSDLAKDEI 201 >UniRef50_B4RW65 Curli production assembly/transport component n=2 Tax=Alteromonas macleodii RepID=B4RW65_ALTMD Length = 130 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 8/131 (6%) Query: 1 MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG--- 57 + R+ + + LF+ +HA E+ + GLL D+++S GH+F S W Sbjct: 4 LYRFSLFTLFFSVLFSP--IHAEEIRLGGLLLDNSISRQGHEFASKISQYWREVPDSSGK 61 Query: 58 NLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQA 117 NL + E + G+ +++ + V++QT++ + ++ V A++ +A+ I+ Sbjct: 62 NLVVKEIIVPQAGTLLSVVYDNKVVYQTYMGRRQVPLDEKVQQAIVLVLDAVANASIDS- 120 Query: 118 LLSTGDLAHDE 128 + DLA DE Sbjct: 121 --RSPDLAGDE 129 >UniRef50_Q5QXH0 Curli production assembly/transport component, CsgE n=1 Tax=Idiomarina loihiensis RepID=Q5QXH0_IDILO Length = 125 Score = 87.0 bits (214), Expect = 1e-16, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 3/106 (2%) Query: 21 HAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGN---LTINERPSARWGSWITITV 77 A E+E+ G++ D T+S G DF+ ++ W + N + I+E+ + G+++ + + Sbjct: 17 QADEIELGGMVLDRTISRFGKDFFFYYTSYWRDIPSTNGITVVIHEQVYPQAGTYLWVEM 76 Query: 78 NQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGD 123 Q IFQT+ + D +K A++ + + R + + + D Sbjct: 77 EQTKIFQTYFGRRQNDVKKMAEKAILISINEVARVKADSVFDTPQD 122 >UniRef50_A5KYB1 CsgE-like protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KYB1_9GAMM Length = 135 Score = 86.3 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 22 AVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVN 78 EV G++ D T++ +G DFY FS Y NLT+ ERP+A GS I + N Sbjct: 52 NDFSEVNGIIVDRTITRLGDDFYFFFSQSLNESYPDLKENLTVKERPTALSGSIIEVLEN 111 Query: 79 QDVIFQTFLFPLKRDFEKTVVF 100 + + Q L + + + ++ Sbjct: 112 RSSV-QRCLPVVDKQKNEPLMQ 132 >UniRef50_A1S9K5 Curli production assembly/transport component CsgE, putative n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9K5_SHEAM Length = 113 Score = 78.2 bits (191), Expect = 7e-14, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 3/106 (2%) Query: 23 VEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDY---TGNLTINERPSARWGSWITITVNQ 79 +VE+ GL+ D T++ G +F +S W N+T+ E + G+ + + +N Sbjct: 3 DDVEISGLVIDRTLTRFGKEFSFYYSSYWRELPFTQGFNVTLTETVFPQAGTLLIMEING 62 Query: 80 DVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLA 125 I+ T + A++ T + L + + N L DLA Sbjct: 63 QKIYSTHFGRRASSIKDKAEQAVLITVDYLAQVRANALLGEGADLA 108 >UniRef50_A0L0B0 Curli production assembly/transport component CsgE, putative n=13 Tax=Shewanella RepID=A0L0B0_SHESA Length = 136 Score = 78.2 bits (191), Expect = 7e-14, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 4/123 (3%) Query: 2 KRYLRWIVAAEFLFA-AGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDY---TG 57 KR I+ L + L ++E+ GL+ D T++ G DF +S W Sbjct: 6 KRLFVCILCPLLLVSSPSVLADNDIEISGLVIDRTLTRFGKDFGFYYSSYWRELPFTQGF 65 Query: 58 NLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQA 117 N+T+ E + G+ +T+ VN I+ T +++ A++ T + L + + N Sbjct: 66 NVTLYETVFPQAGTVLTLEVNGTRIYTTHFGRRANPIKESAEQAILLTIDYLAQVRANAI 125 Query: 118 LLS 120 Sbjct: 126 TGD 128 >UniRef50_C6X5S3 Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5S3_FLAB3 Length = 240 Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 3/98 (3%) Query: 25 VEVPGLLTDHTVSSIGHDFYRAFSDKWES---DYTGNLTINERPSARWGSWITITVNQDV 81 +E+ GL D T + G FY F K+ Y G +T++E PS S I+++++ V Sbjct: 141 IELSGLTIDDTKTRFGQQFYETFFKKYNQLPQKYEGTVTVSELPSMGRNSRISVSLDDQV 200 Query: 82 IFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALL 119 I+ P + + + R + Sbjct: 201 IYTFITRPADEAMDAEADRTMALLADYSKRNAVRDQQF 238 >UniRef50_Q26FL8 Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26FL8_9BACT Length = 242 Score = 49.3 bits (116), Expect = 3e-05, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 3/101 (2%) Query: 20 LHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWES-DYTGN--LTINERPSARWGSWITIT 76 + VE+ G++ + T + DFY F ++ GN +T+ E S I +T Sbjct: 141 VSNDGVEIRGIVIEKTRTKPARDFYDYFYGEYHKYKINGNRIVTVEEEFGQGRSSLIKVT 200 Query: 77 VNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQA 117 V +++++Q F+ P K+ ++ A+ + + Q ++ Sbjct: 201 VGREIVYQFFVQPKKKYLKQMADNAIRSVFQKFLQIQKEKS 241 >UniRef50_A5FHE6 Putative uncharacterized protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FHE6_FLAJ1 Length = 99 Score = 44.3 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 3/96 (3%) Query: 27 VPGLLTDHTVSSIGHDFYRAFSDKWES---DYTGNLTINERPSARWGSWITITVNQDVIF 83 + G++TD T + +G DFY + K+ + +TI E S + IT++++ +VI+ Sbjct: 1 MRGIITDDTKTKMGKDFYDRYYYKYNDIGINADKIVTIGEEYSFARNTAITVSIDNEVIY 60 Query: 84 QTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALL 119 + P + ++ T L ++ + Sbjct: 61 EFLARPDDEFLDAVAEESVNATFTYLKEKEKERKYF 96 >UniRef50_C2G2I8 Putative uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2G2I8_9SPHI Length = 253 Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 3/91 (3%) Query: 27 VPGLLTDHTVSSIGHDFY-RAFSDK--WESDYTGNLTINERPSARWGSWITITVNQDVIF 83 + G++ D+T S +G DF+ F+ YT +T+ E PS I+I V IF Sbjct: 158 IKGIMVDNTKSKVGKDFFDMLFNQYSQLSEKYTFTITLRELPSFSNNGIISIEVEDLTIF 217 Query: 84 QTFLFPLKRDFEKTVVFALIQTEEALNRRQI 114 P + + L Q R + Sbjct: 218 TLRAIPNEEYLNLQLQLCLQQINNYNKNRNL 248 >UniRef50_D2QT93 Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QT93_9SPHI Length = 173 Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 26/118 (22%) Query: 30 LLTDHTVSSIGHDFYRAFSDKWESDYT------------------------GNLTINERP 65 LL D+T S IG DFY AF + +TI+E P Sbjct: 48 LLLDNTRSKIGRDFYEAFFRHYAELPKTAASLFPTDTTLKITPNVELDINAFVVTIDELP 107 Query: 66 SARWG-SWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQ-INQALLST 121 + G S I++++N +++Q ++ + E + A + + Q + ++L + Sbjct: 108 ALGTGTSIISVSLNDQLVWQNYVQIRQEVLELYALNAAEVINQYVLNYQELQRSLEND 165 >UniRef50_A2TUP3 Putative uncharacterized protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TUP3_9FLAO Length = 253 Score = 40.8 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 3/101 (2%) Query: 14 LFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKW---ESDYTGNLTINERPSARWG 70 + + + + GL+ + T + G DFYR F K ++ ++ I E Sbjct: 142 ILSQALQQGQSIGLTGLIIEDTKTKAGRDFYRYFFQKCSIDNIKWSKDIIIKEDFGLGRS 201 Query: 71 SWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNR 111 + I + I + P K + Q + N+ Sbjct: 202 TVIKVIEGTTTIVKFNAQPRDEFLRKASEECIRQVQGHFNQ 242 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A201 Curli production assembly/transport component cs... 159 3e-38 UniRef50_A6CUM5 CsgE-like protein n=2 Tax=Vibrio RepID=A6CUM5_9VIBR 142 4e-33 UniRef50_Q3ID62 Curli production assembly/transport component n=... 137 1e-31 UniRef50_B6ENC3 Assembly/transport component in curli production... 135 3e-31 UniRef50_A0L0B0 Curli production assembly/transport component Cs... 133 1e-30 UniRef50_C9QFY8 Curli production assembly/transport component Cs... 133 1e-30 UniRef50_Q5E244 Curli production assembly/transport component Cs... 132 5e-30 UniRef50_B4RW65 Curli production assembly/transport component n=... 129 3e-29 UniRef50_A4VNF2 Curli fiber protein CsgE, putative n=1 Tax=Pseud... 127 1e-28 UniRef50_B1J8A4 Curli fiber operon CsgE n=6 Tax=Pseudomonas RepI... 121 6e-27 UniRef50_A1S9K5 Curli production assembly/transport component Cs... 117 1e-25 UniRef50_Q392B9 Putative uncharacterized protein n=1 Tax=Burkhol... 116 2e-25 UniRef50_Q5QXH0 Curli production assembly/transport component, C... 115 3e-25 UniRef50_Q084E6 Putative uncharacterized protein n=1 Tax=Shewane... 113 2e-24 UniRef50_A9DHI1 CsgE-like protein n=3 Tax=Shewanella RepID=A9DHI... 113 2e-24 UniRef50_Q26FL8 Putative uncharacterized protein n=1 Tax=Flavoba... 100 1e-20 UniRef50_C6X5S3 Putative uncharacterized protein n=1 Tax=Flavoba... 96 3e-19 UniRef50_A5KYB1 CsgE-like protein n=1 Tax=Vibrionales bacterium ... 95 9e-19 UniRef50_A5FHE6 Putative uncharacterized protein n=1 Tax=Flavoba... 87 2e-16 Sequences not found previously or not previously below threshold: UniRef50_A3XJL3 Putative uncharacterized protein n=1 Tax=Leeuwen... 63 2e-09 UniRef50_A2TUP3 Putative uncharacterized protein n=1 Tax=Dokdoni... 63 2e-09 UniRef50_A6EMN2 Putative uncharacterized protein n=1 Tax=unident... 61 1e-08 UniRef50_D2QT93 Putative uncharacterized protein n=1 Tax=Spiroso... 56 3e-07 UniRef50_C2G2I8 Putative uncharacterized protein n=2 Tax=Sphingo... 54 1e-06 UniRef50_D2QPP7 Putative uncharacterized protein n=1 Tax=Spiroso... 48 9e-05 >UniRef50_P0A201 Curli production assembly/transport component csgE n=94 Tax=Enterobacteriaceae RepID=CSGE_SALTI Length = 131 Score = 159 bits (401), Expect = 3e-38, Method: Composition-based stats. Identities = 117/131 (89%), Positives = 121/131 (92%), Gaps = 2/131 (1%) Query: 1 MKRYLRWIVAAEFLFAAGNLHAVEVEV--PGLLTDHTVSSIGHDFYRAFSDKWESDYTGN 58 MKRYL WIVAAE LFA GNLHA EVEV PGLLTDHTVSSIGH+FYRAFSDKWES+YTGN Sbjct: 1 MKRYLTWIVAAELLFATGNLHANEVEVEVPGLLTDHTVSSIGHEFYRAFSDKWESEYTGN 60 Query: 59 LTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQAL 118 LTINERPSARWGSWITITVNQDVIFQTFLFP+KRDFEKTVVFAL QTEEALNRRQI+Q L Sbjct: 61 LTINERPSARWGSWITITVNQDVIFQTFLFPMKRDFEKTVVFALAQTEEALNRRQIDQTL 120 Query: 119 LSTGDLAHDEF 129 LST DLA DEF Sbjct: 121 LSTSDLARDEF 131 >UniRef50_A6CUM5 CsgE-like protein n=2 Tax=Vibrio RepID=A6CUM5_9VIBR Length = 164 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 3/111 (2%) Query: 22 AVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVN 78 EV G++ D T++ +G DFY FS + Y NLTI E P+A GS I + + Sbjct: 54 NDFSEVSGVIVDRTITRLGEDFYFFFSQQLNDRYPDLKENLTIKEIPTALSGSIIEVYHS 113 Query: 79 QDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 + I++T L P +R + AL + R Q + + T DL HDEF Sbjct: 114 RKAIYRTALSPGRRQAKDRANDALQVVGNYIIRWQAERLYMDTFDLEHDEF 164 >UniRef50_Q3ID62 Curli production assembly/transport component n=3 Tax=Alteromonadales RepID=Q3ID62_PSEHT Length = 133 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 6/125 (4%) Query: 4 YLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDY---TGNLT 60 Y+ ++++ F+ E+E+ GLL D ++S GH FY FS+ W N+ Sbjct: 8 YISYLLSVLLCFSPAAFANDELEIDGLLLDRSISRFGHQFYYKFSNYWRDLPSTAGFNIE 67 Query: 61 INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS 120 I E + G+ +++ +N +I+ T+L ++ V A+ +A+ R + +S Sbjct: 68 IKETVLPKAGTRLSLIMNNQLIYATYLGRRLEPLDERVEQAVYIVIDAMAR---SNMAVS 124 Query: 121 TGDLA 125 + D+A Sbjct: 125 SPDMA 129 >UniRef50_B6ENC3 Assembly/transport component in curli production, CsgE n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ENC3_ALISL Length = 153 Score = 135 bits (341), Expect = 3e-31, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 3/111 (2%) Query: 22 AVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVN 78 VE+ GL+ D T++ +G DFY +FS K S Y NLT+ ERP+A GS I + Sbjct: 43 DDLVEIDGLIIDRTLTRLGKDFYFSFSIKMNSKYDDLGVNLTVKERPTALSGSIIGVYHF 102 Query: 79 QDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 VI++ L P +R E+ A+ + + + Q + T DL E Sbjct: 103 DKVIYRGALSPGQRQAEEKAEQAVEAVNQYIVKWQTEKLFKDTYDLDFPEI 153 >UniRef50_A0L0B0 Curli production assembly/transport component CsgE, putative n=13 Tax=Shewanella RepID=A0L0B0_SHESA Length = 136 Score = 133 bits (335), Expect = 1e-30, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 4/123 (3%) Query: 2 KRYLRWIVAAEFLFA-AGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDY---TG 57 KR I+ L + L ++E+ GL+ D T++ G DF +S W Sbjct: 6 KRLFVCILCPLLLVSSPSVLADNDIEISGLVIDRTLTRFGKDFGFYYSSYWRELPFTQGF 65 Query: 58 NLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQA 117 N+T+ E + G+ +T+ VN I+ T +++ A++ T + L + + N Sbjct: 66 NVTLYETVFPQAGTVLTLEVNGTRIYTTHFGRRANPIKESAEQAILLTIDYLAQVRANAI 125 Query: 118 LLS 120 Sbjct: 126 TGD 128 >UniRef50_C9QFY8 Curli production assembly/transport component CsgE n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QFY8_VIBOR Length = 153 Score = 133 bits (335), Expect = 1e-30, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 3/112 (2%) Query: 21 HAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITV 77 H +E EV GLL D T++ +G DFY F+ + NLT+ ERP+A GS I+I Sbjct: 42 HLLENEVDGLLIDRTMTRLGDDFYFFFTQLMNERHGSLKENLTVKERPTALSGSIISIFH 101 Query: 78 NQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 + +I++T L P ++ E AL L R + + T DLA DEF Sbjct: 102 REKLIYRTALSPGRQHAEDKAKQALTAVTSHLLRWKTQLSYQDTFDLAQDEF 153 >UniRef50_Q5E244 Curli production assembly/transport component CsgE n=2 Tax=Vibrio fischeri RepID=Q5E244_VIBF1 Length = 150 Score = 132 bits (331), Expect = 5e-30, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 3/111 (2%) Query: 22 AVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVN 78 +E+ GL+ D T++ +G DFY +FS K + Y NLTI ERP+A GS I + Sbjct: 40 DDLIELDGLIIDRTLTRLGRDFYFSFSMKMNARYEDIDVNLTIKERPTALSGSIIGVYHF 99 Query: 79 QDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 VI+++ L P +R ++ AL + + + Q + T DL + E Sbjct: 100 DKVIYRSALSPGQRQADEKAEQALEAVNKYIVKWQTEKLFKDTFDLDYPEI 150 >UniRef50_B4RW65 Curli production assembly/transport component n=2 Tax=Alteromonas macleodii RepID=B4RW65_ALTMD Length = 130 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 8/131 (6%) Query: 1 MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG--- 57 + R+ + + LF+ +HA E+ + GLL D+++S GH+F S W Sbjct: 4 LYRFSLFTLFFSVLFSP--IHAEEIRLGGLLLDNSISRQGHEFASKISQYWREVPDSSGK 61 Query: 58 NLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQA 117 NL + E + G+ +++ + V++QT++ + ++ V A++ +A+ I+ Sbjct: 62 NLVVKEIIVPQAGTLLSVVYDNKVVYQTYMGRRQVPLDEKVQQAIVLVLDAVANASIDS- 120 Query: 118 LLSTGDLAHDE 128 + DLA DE Sbjct: 121 --RSPDLAGDE 129 >UniRef50_A4VNF2 Curli fiber protein CsgE, putative n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VNF2_PSEU5 Length = 127 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 2/111 (1%) Query: 21 HAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWES--DYTGNLTINERPSARWGSWITITVN 78 A E E+ G +T++T+S GH+FY F ++ NL I ERPSARWG + + Sbjct: 17 QADEAELQGFITNNTISRSGHEFYLRFCERLNDISSLDFNLAIKERPSARWGVLVWVEHE 76 Query: 79 QDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 +++ FL P D ++ A E +NRR+I D+A DE Sbjct: 77 NQTLYRRFLQPNVADMKEPAYEAADFVVEEINRRKIEALFEDNIDMAKDEL 127 >UniRef50_B1J8A4 Curli fiber operon CsgE n=6 Tax=Pseudomonas RepID=B1J8A4_PSEPW Length = 135 Score = 121 bits (304), Expect = 6e-27, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Query: 15 FAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWE--SDYTGNLTINERPSARWGSW 72 + E E+ G + D+T+S IGHDFY F+D+ S NL + ERP ARWGS Sbjct: 19 VSDVARADAEDEMKGFIVDNTISHIGHDFYAYFADRLRATSRLDFNLVVRERPDARWGSL 78 Query: 73 ITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 IT+ +DV+++ FL P ++ V A ++ + +R++ + L T DL DE Sbjct: 79 ITVEFERDVLYRRFLPPNVTQLKEEAVAAADLVKQEVIQRKLQRLLQDTTDLERDEL 135 >UniRef50_A1S9K5 Curli production assembly/transport component CsgE, putative n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9K5_SHEAM Length = 113 Score = 117 bits (292), Expect = 1e-25, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 3/107 (2%) Query: 22 AVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDY---TGNLTINERPSARWGSWITITVN 78 +VE+ GL+ D T++ G +F +S W N+T+ E + G+ + + +N Sbjct: 2 DDDVEISGLVIDRTLTRFGKEFSFYYSSYWRELPFTQGFNVTLTETVFPQAGTLLIMEIN 61 Query: 79 QDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLA 125 I+ T + A++ T + L + + N L DLA Sbjct: 62 GQKIYSTHFGRRASSIKDKAEQAVLITVDYLAQVRANALLGEGADLA 108 >UniRef50_Q392B9 Putative uncharacterized protein n=1 Tax=Burkholderia sp. 383 RepID=Q392B9_BURS3 Length = 201 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 3/109 (2%) Query: 24 EVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGN---LTINERPSARWGSWITITVNQD 80 E ++ G +T V+ G DFY FS W + I+ERPS R+GS I + Q Sbjct: 93 EDQLGGTVTTDAVTLAGRDFYTYFSQTWSEIPLSERYMVAIHERPSGRYGSLIWVEFQQK 152 Query: 81 VIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF 129 +FQTFL + + + A + + + + ++ L DLA DE Sbjct: 153 RVFQTFLPIARANVKAVAESAANISFQTVIQDDLSNLLFPDSDLAKDEI 201 >UniRef50_Q5QXH0 Curli production assembly/transport component, CsgE n=1 Tax=Idiomarina loihiensis RepID=Q5QXH0_IDILO Length = 125 Score = 115 bits (289), Expect = 3e-25, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 3/106 (2%) Query: 21 HAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGN---LTINERPSARWGSWITITV 77 A E+E+ G++ D T+S G DF+ ++ W + N + I+E+ + G+++ + + Sbjct: 17 QADEIELGGMVLDRTISRFGKDFFFYYTSYWRDIPSTNGITVVIHEQVYPQAGTYLWVEM 76 Query: 78 NQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGD 123 Q IFQT+ + D +K A++ + + R + + + D Sbjct: 77 EQTKIFQTYFGRRQNDVKKMAEKAILISINEVARVKADSVFDTPQD 122 >UniRef50_Q084E6 Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q084E6_SHEFN Length = 181 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 6/109 (5%) Query: 27 VPGLLTDHTVSSIGHDFYRAFSDKWESDYT----GNLTINERPSARWGSWITITVNQDVI 82 + GL+ + ++ GH FYR F + LT+ E+ +AR GS I + N+ + Sbjct: 73 IDGLILNRAMTRFGHRFYREFVSAYRDINGMSNHSGLTVVEQATARSGSKILVLHNRKPV 132 Query: 83 FQTFLFPLKRDFEKTVVFALIQTEEALN--RRQINQALLSTGDLAHDEF 129 F TFL P R+ + A + +L ++Q A S DLA DEF Sbjct: 133 FVTFLSPASRNIDAQANMAAKRVNASLLQYQQQAKWAAFSDPDLAPDEF 181 >UniRef50_A9DHI1 CsgE-like protein n=3 Tax=Shewanella RepID=A9DHI1_9GAMM Length = 146 Score = 113 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 6/109 (5%) Query: 27 VPGLLTDHTVSSIGHDFYRAFSDKWES----DYTGNLTINERPSARWGSWITITVNQDVI 82 V GL+ + ++ +GH FYR F + L+I ER +AR GS ITI N+ I Sbjct: 38 VDGLILNRAMTRVGHRFYREFVLAYRDIGGISSHSGLSIVERATARSGSKITILHNRKPI 97 Query: 83 FQTFLFPLKRDFEKTVVFALIQTEEAL--NRRQINQALLSTGDLAHDEF 129 + T + P+ R+ + A + + L N++Q + A DLA DEF Sbjct: 98 YITVVSPVSRNIDDQAAAAASRVNQTLRQNKKQASWAQFLDPDLAPDEF 146 >UniRef50_Q26FL8 Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26FL8_9BACT Length = 242 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 3/101 (2%) Query: 20 LHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWES-DYTGN--LTINERPSARWGSWITIT 76 + VE+ G++ + T + DFY F ++ GN +T+ E S I +T Sbjct: 141 VSNDGVEIRGIVIEKTRTKPARDFYDYFYGEYHKYKINGNRIVTVEEEFGQGRSSLIKVT 200 Query: 77 VNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQA 117 V +++++Q F+ P K+ ++ A+ + + Q ++ Sbjct: 201 VGREIVYQFFVQPKKKYLKQMADNAIRSVFQKFLQIQKEKS 241 >UniRef50_C6X5S3 Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5S3_FLAB3 Length = 240 Score = 96.2 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 3/100 (3%) Query: 23 VEVEVPGLLTDHTVSSIGHDFYRAFSDKWES---DYTGNLTINERPSARWGSWITITVNQ 79 +E+ GL D T + G FY F K+ Y G +T++E PS S I+++++ Sbjct: 139 NRIELSGLTIDDTKTRFGQQFYETFFKKYNQLPQKYEGTVTVSELPSMGRNSRISVSLDD 198 Query: 80 DVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALL 119 VI+ P + + + R + Sbjct: 199 QVIYTFITRPADEAMDAEADRTMALLADYSKRNAVRDQQF 238 >UniRef50_A5KYB1 CsgE-like protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KYB1_9GAMM Length = 135 Score = 94.7 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 22 AVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTG---NLTINERPSARWGSWITITVN 78 EV G++ D T++ +G DFY FS Y NLT+ ERP+A GS I + N Sbjct: 52 NDFSEVNGIIVDRTITRLGDDFYFFFSQSLNESYPDLKENLTVKERPTALSGSIIEVLEN 111 Query: 79 QDVIFQTFLFPLKRDFEKTVVF 100 + + Q L + + + ++ Sbjct: 112 RSSV-QRCLPVVDKQKNEPLMQ 132 >UniRef50_A5FHE6 Putative uncharacterized protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FHE6_FLAJ1 Length = 99 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 44/97 (45%), Gaps = 3/97 (3%) Query: 27 VPGLLTDHTVSSIGHDFYRAFSDKWES---DYTGNLTINERPSARWGSWITITVNQDVIF 83 + G++TD T + +G DFY + K+ + +TI E S + IT++++ +VI+ Sbjct: 1 MRGIITDDTKTKMGKDFYDRYYYKYNDIGINADKIVTIGEEYSFARNTAITVSIDNEVIY 60 Query: 84 QTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS 120 + P + ++ T L ++ + + Sbjct: 61 EFLARPDDEFLDAVAEESVNATFTYLKEKEKERKYFT 97 >UniRef50_A3XJL3 Putative uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XJL3_9FLAO Length = 241 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 3/91 (3%) Query: 22 AVEVEVPGLLTDHTVSSIGHDFYRAFSDKW---ESDYTGNLTINERPSARWGSWITITVN 78 A + + G++ + T + G DFY+ F + + +TI E + + I + V Sbjct: 138 ADGISLTGIVVEDTKTKPGSDFYKEFYSDYLSKNINGKFIVTIKEVLAIGRNTKIEVLVA 197 Query: 79 QDVIFQTFLFPLKRDFEKTVVFALIQTEEAL 109 + + + P + +A+++ + L Sbjct: 198 NTKVLEFIVRPSMAYLREMKNYAILRVIKQL 228 >UniRef50_A2TUP3 Putative uncharacterized protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TUP3_9FLAO Length = 253 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 3/112 (2%) Query: 14 LFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKW---ESDYTGNLTINERPSARWG 70 + + + + GL+ + T + G DFYR F K ++ ++ I E Sbjct: 142 ILSQALQQGQSIGLTGLIIEDTKTKAGRDFYRYFFQKCSIDNIKWSKDIIIKEDFGLGRS 201 Query: 71 SWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTG 122 + I + I + P K + Q + N+ + LL++ Sbjct: 202 TVIKVIEGTTTIVKFNAQPRDEFLRKASEECIRQVQGHFNQLARTKQLLTSY 253 >UniRef50_A6EMN2 Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EMN2_9BACT Length = 251 Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 40/100 (40%), Gaps = 3/100 (3%) Query: 23 VEVEVPGLLTDHTVSSIGHDFYRAFSD--KWESDYTGNLT-INERPSARWGSWITITVNQ 79 V + G++TD T + G DF++ F + T L + E+ + + I + V Sbjct: 149 EGVSIIGIVTDKTKTKHGKDFFKEFYSIYLYNQLKTEELILVEEQFAQGRNTRIEVKVGN 208 Query: 80 DVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALL 119 V+ + F+ P + + ++ R + + L Sbjct: 209 VVVAKFFVRPSYDYVKDMAKATVNNIKKHFLRLENQKKQL 248 >UniRef50_D2QT93 Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QT93_9SPHI Length = 173 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 25/119 (21%) Query: 30 LLTDHTVSSIGHDFYRAFSDKWESDY------------------------TGNLTINERP 65 LL D+T S IG DFY AF + +TI+E P Sbjct: 48 LLLDNTRSKIGRDFYEAFFRHYAELPKTAASLFPTDTTLKITPNVELDINAFVVTIDELP 107 Query: 66 SARWG-SWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGD 123 + G S I++++N +++Q ++ + E + A + + Q Q L D Sbjct: 108 ALGTGTSIISVSLNDQLVWQNYVQIRQEVLELYALNAAEVINQYVLNYQELQRSLENDD 166 >UniRef50_C2G2I8 Putative uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2G2I8_9SPHI Length = 253 Score = 54.2 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 3/97 (3%) Query: 21 HAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWE---SDYTGNLTINERPSARWGSWITITV 77 + + G++ D+T S +G DF+ +++ YT +T+ E PS I+I V Sbjct: 152 AKEDYTIKGIMVDNTKSKVGKDFFDMLFNQYSQLSEKYTFTITLRELPSFSNNGIISIEV 211 Query: 78 NQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQI 114 IF P + + L Q R + Sbjct: 212 EDLTIFTLRAIPNEEYLNLQLQLCLQQINNYNKNRNL 248 >UniRef50_D2QPP7 Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPP7_9SPHI Length = 173 Score = 48.1 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 21/102 (20%) Query: 30 LLTDHTVSSIGHDFYRAF------------------SDKWESDYTGN--LTINERPSARW 69 L+ D++ + IG +FY +F S K + T + +TI E PS Sbjct: 52 LILDNSRTKIGREFYDSFFREFVLPAPTTPADSSGLSKKAQDLETDSWVITIEELPSTSA 111 Query: 70 GS-WITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALN 110 S I++++N ++I+Q F+ E + A+ + + Sbjct: 112 TSNIISVSINDELIWQQFVQVRIDLIEDYALNAVETLRQYII 153 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.140 0.360 Lambda K H 0.267 0.0427 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 699,192,710 Number of Sequences: 3077464 Number of extensions: 24325011 Number of successful extensions: 61644 Number of sequences better than 1.0e-01: 25 Number of HSP's better than 0.1 without gapping: 45 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 61540 Number of HSP's gapped (non-prelim): 65 length of query: 129 length of database: 1,040,396,356 effective HSP length: 95 effective length of query: 34 effective length of database: 748,037,276 effective search space: 25433267384 effective search space used: 25433267384 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 87 (38.1 bits)