BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (285 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77396 Uncharacterized HTH-type transcriptional regulat... 587 e-166 UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=En... 487 e-136 UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein ... 182 8e-45 UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=T... 172 1e-41 UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Gr... 164 3e-39 UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=E... 153 5e-36 UniRef50_P32677 Uncharacterized HTH-type transcriptional regulat... 151 3e-35 UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae Rep... 148 2e-34 UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=K... 132 1e-29 UniRef50_C8QGZ7 Transcriptional regulator, AraC family n=1 Tax=P... 127 6e-28 UniRef50_Q7NVM9 Probable transcriptional regulator, AraC family ... 120 4e-26 UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC fami... 117 5e-25 UniRef50_C4LFY1 Transcriptional regulator, AraC family n=1 Tax=T... 112 1e-23 UniRef50_A6DLX0 Transcriptional regulator n=1 Tax=Lentisphaera a... 93 1e-17 UniRef50_C0A2N9 AraC-type DNA-binding domain-containing protein-... 92 2e-17 UniRef50_A3GSD5 Transcriptional regulator (Fragment) n=1 Tax=Vib... 87 5e-16 UniRef50_C6IVE2 Response regulator n=1 Tax=Paenibacillus sp. ora... 87 6e-16 UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicu... 87 8e-16 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 86 1e-15 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 85 3e-15 UniRef50_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecali... 84 5e-15 UniRef50_UPI0001C368F3 two component transcriptional regulator, ... 82 2e-14 UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostri... 82 3e-14 UniRef50_A8R814 Putative uncharacterized protein n=1 Tax=Eubacte... 81 4e-14 UniRef50_A8MKS9 Two component transcriptional regulator, AraC fa... 81 4e-14 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 81 5e-14 UniRef50_B8I0K9 Two component transcriptional regulator, AraC fa... 81 5e-14 UniRef50_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostri... 80 6e-14 UniRef50_C6CV61 Two component transcriptional regulator, AraC fa... 80 6e-14 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 80 6e-14 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 80 7e-14 UniRef50_C0A4T0 AraC-type DNA-binding domain-containing protein-... 80 8e-14 UniRef50_Q2BC36 Two-component response regulator n=1 Tax=Bacillu... 80 8e-14 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 80 8e-14 UniRef50_C0D484 Putative uncharacterized protein n=1 Tax=Clostri... 80 8e-14 UniRef50_C6CWQ4 Two component transcriptional regulator, AraC fa... 80 9e-14 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 80 9e-14 UniRef50_UPI0001787DEA transcriptional regulator, AraC family n=... 80 9e-14 UniRef50_B9MP59 Two component transcriptional regulator, AraC fa... 80 9e-14 UniRef50_C5RGL0 Two component transcriptional regulator, AraC fa... 80 1e-13 UniRef50_C6J2Y7 Transcriptional regulator (Fragment) n=1 Tax=Pae... 79 2e-13 UniRef50_C0AA65 AraC-type DNA-binding domain-containing protein-... 79 2e-13 UniRef50_Q2RGN4 Two component transcriptional regulator, AraC fa... 79 2e-13 UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostri... 79 2e-13 UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and... 79 2e-13 UniRef50_C5EQZ1 Predicted protein n=1 Tax=Clostridiales bacteriu... 78 3e-13 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 78 3e-13 UniRef50_Q5QL43 Two-component response regulator n=2 Tax=Geobaci... 78 3e-13 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 78 3e-13 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 78 4e-13 UniRef50_A0AHT2 Complete genome n=15 Tax=Listeria RepID=A0AHT2_L... 78 4e-13 UniRef50_C6JC74 Two component transcriptional regulator n=1 Tax=... 78 4e-13 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 78 4e-13 UniRef50_C6CZ23 Two component transcriptional regulator, AraC fa... 77 5e-13 UniRef50_C6LKL3 Putative response regulator receiver domain prot... 77 6e-13 UniRef50_C6CT15 Two component transcriptional regulator, AraC fa... 77 6e-13 UniRef50_B1C0X8 Putative uncharacterized protein n=1 Tax=Clostri... 77 6e-13 UniRef50_A4XMG0 Two component transcriptional regulator, AraC fa... 77 7e-13 UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=M... 77 7e-13 UniRef50_B8I3I7 Two component transcriptional regulator, AraC fa... 77 7e-13 UniRef50_Q5WIQ6 AraC/XylS family transcriptional regulator n=1 T... 77 7e-13 UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillu... 77 8e-13 UniRef50_UPI0001C352BF transcriptional regulator, AraC family pr... 77 8e-13 UniRef50_A3DK80 Two component transcriptional regulator, AraC fa... 77 9e-13 UniRef50_C6LGW7 DNA-binding response regulator n=1 Tax=Bryantell... 77 9e-13 UniRef50_Q1QCG2 Transcriptional regulator, AraC family with amid... 77 1e-12 UniRef50_UPI00019739A0 two component AraC family transcriptional... 76 1e-12 UniRef50_C0D4G3 Putative uncharacterized protein n=1 Tax=Clostri... 76 1e-12 UniRef50_A8MJM2 Two component transcriptional regulator, AraC fa... 76 1e-12 UniRef50_B6QXA8 Putative uncharacterized protein n=1 Tax=Pseudov... 76 1e-12 UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=V... 76 1e-12 UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=C... 76 1e-12 UniRef50_C6CXU8 Two component transcriptional regulator, AraC fa... 76 1e-12 UniRef50_C6IY76 Two component transcriptional regulator n=1 Tax=... 76 1e-12 UniRef50_A0PY49 Two-component response regulator n=2 Tax=Clostri... 76 1e-12 UniRef50_UPI0001788F54 two component transcriptional regulator, ... 76 1e-12 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 76 2e-12 UniRef50_C6IYA1 Response regulator n=1 Tax=Paenibacillus sp. ora... 76 2e-12 UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=... 76 2e-12 UniRef50_C0A6S4 AraC-type DNA-binding domain-containing protein-... 75 2e-12 UniRef50_UPI000178A1A9 transcriptional regulator, AraC family n=... 75 2e-12 UniRef50_UPI0001C36B1C two component transcriptional regulator, ... 75 2e-12 UniRef50_UPI0001787E1A transcriptional regulator, AraC family n=... 75 3e-12 UniRef50_C0D0A3 Putative uncharacterized protein n=1 Tax=Clostri... 75 3e-12 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 75 3e-12 UniRef50_UPI0001788A43 two component transcriptional regulator, ... 75 3e-12 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 75 3e-12 UniRef50_UPI00017895F4 transcriptional regulator, AraC family n=... 75 3e-12 UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=... 75 3e-12 UniRef50_A8LZR9 Transcriptional regulator, AraC family n=3 Tax=A... 74 4e-12 UniRef50_A9KQP4 Two component transcriptional regulator, AraC fa... 74 4e-12 UniRef50_UPI0001787D2D two component transcriptional regulator, ... 74 4e-12 UniRef50_C6J2X2 Predicted protein n=1 Tax=Paenibacillus sp. oral... 74 4e-12 UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicu... 74 4e-12 UniRef50_A4XFU2 Two component transcriptional regulator, AraC fa... 74 5e-12 UniRef50_C5EHK1 Predicted protein n=1 Tax=Clostridiales bacteriu... 74 5e-12 UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Ther... 74 5e-12 UniRef50_A4XJ73 Two component transcriptional regulator, AraC fa... 74 5e-12 UniRef50_C6J5N6 Two component transcriptional regulator n=1 Tax=... 74 6e-12 UniRef50_C2KZS5 Response regulator n=1 Tax=Oribacterium sinus F0... 74 6e-12 UniRef50_C9A6S2 Response regulator receiver n=5 Tax=Bacteria Rep... 74 6e-12 UniRef50_C5RJF8 Transcriptional regulator, AraC family n=1 Tax=C... 74 7e-12 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 74 8e-12 UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryante... 74 8e-12 UniRef50_C5EHL9 Predicted protein n=1 Tax=Clostridiales bacteriu... 74 8e-12 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 73 9e-12 UniRef50_C4L2Y3 Two component transcriptional regulator, AraC fa... 73 9e-12 UniRef50_C6IXH5 Response regulator n=1 Tax=Paenibacillus sp. ora... 73 1e-11 UniRef50_C4G516 Putative uncharacterized protein n=1 Tax=Abiotro... 73 1e-11 UniRef50_A7VQP5 Putative uncharacterized protein n=1 Tax=Clostri... 73 1e-11 UniRef50_C6D427 Two component transcriptional regulator, AraC fa... 73 1e-11 UniRef50_C6CXB6 Two component transcriptional regulator, AraC fa... 73 1e-11 UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=V... 73 1e-11 UniRef50_A6TMD1 Response regulator receiver protein n=1 Tax=Alka... 73 1e-11 UniRef50_C6IZZ6 Transcriptional regulator n=2 Tax=Paenibacillus ... 73 1e-11 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 73 1e-11 UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. ora... 73 1e-11 UniRef50_C5ERJ4 Two component transcriptional regulator n=1 Tax=... 73 1e-11 UniRef50_C4G3Y7 Putative uncharacterized protein n=1 Tax=Abiotro... 73 1e-11 UniRef50_C7GGB1 Putative two-component response regulator n=1 Ta... 73 1e-11 UniRef50_C6D127 Two component transcriptional regulator, AraC fa... 73 1e-11 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 73 1e-11 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 73 1e-11 UniRef50_B8FUQ5 Transcriptional regulator, AraC family n=2 Tax=D... 72 2e-11 UniRef50_B1YJP0 Two component transcriptional regulator, AraC fa... 72 2e-11 UniRef50_C6D490 Two component transcriptional regulator, AraC fa... 72 2e-11 UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillu... 72 2e-11 UniRef50_UPI0001C35C05 AraC family transcriptional regulator n=1... 72 2e-11 UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=... 72 2e-11 UniRef50_C0CU25 Putative uncharacterized protein n=1 Tax=Clostri... 72 2e-11 UniRef50_C6CUJ6 Two component transcriptional regulator, AraC fa... 72 2e-11 UniRef50_C5RF55 Transcriptional regulator, AraC family n=1 Tax=C... 72 2e-11 UniRef50_C6CVW8 Two component transcriptional regulator, AraC fa... 72 2e-11 UniRef50_UPI0001C36195 two component transcriptional regulator, ... 72 2e-11 UniRef50_C0EDZ9 Putative uncharacterized protein n=1 Tax=Clostri... 72 2e-11 UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillu... 72 2e-11 UniRef50_C5EJY2 Predicted protein n=1 Tax=Clostridiales bacteriu... 72 2e-11 UniRef50_A9KSM8 Transcriptional regulator, AraC family n=1 Tax=C... 72 2e-11 UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=... 72 2e-11 UniRef50_C8ZXM2 DNA binding response regulator n=4 Tax=Enterococ... 72 2e-11 UniRef50_A0PM92 Transcriptional regulatory protein n=4 Tax=Mycob... 72 2e-11 UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostri... 72 3e-11 UniRef50_D1PQT3 Putative two-component response regulator n=1 Ta... 72 3e-11 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 72 3e-11 UniRef50_A4XMX4 Two component transcriptional regulator, AraC fa... 72 3e-11 UniRef50_UPI0001788C2F two component transcriptional regulator, ... 72 3e-11 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 72 3e-11 UniRef50_D1N5H4 Transcriptional regulator, AraC family n=1 Tax=V... 72 3e-11 UniRef50_C6D075 Transcriptional regulator, AraC family n=1 Tax=P... 72 3e-11 UniRef50_A7VPU9 Putative uncharacterized protein n=1 Tax=Clostri... 71 3e-11 UniRef50_C6CV92 Transcriptional regulator, AraC family n=1 Tax=P... 71 3e-11 UniRef50_B1ZXD9 Transcriptional regulator, AraC family n=2 Tax=O... 71 4e-11 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 71 4e-11 UniRef50_C9A684 Predicted protein n=1 Tax=Enterococcus casselifl... 71 4e-11 UniRef50_C6CZ56 Two component transcriptional regulator, AraC fa... 71 4e-11 UniRef50_A8SAS3 Putative uncharacterized protein n=1 Tax=Faecali... 71 4e-11 UniRef50_C9L8L2 Transcriptional regulator, AraC family n=2 Tax=C... 71 4e-11 UniRef50_UPI0001B9EC7D transcriptional regulator, AraC family n=... 71 4e-11 UniRef50_C2HBK3 AraC family response regulator n=19 Tax=Enteroco... 71 4e-11 UniRef50_A9KTC8 Two component transcriptional regulator, AraC fa... 71 4e-11 UniRef50_UPI0001C35FBC two component transcriptional regulator, ... 71 4e-11 UniRef50_UPI0001C35C03 two component transcriptional regulator, ... 71 5e-11 UniRef50_D1PQV2 Putative two-component response regulator n=1 Ta... 71 5e-11 UniRef50_C6CWB0 Two component transcriptional regulator, AraC fa... 71 5e-11 UniRef50_C0D789 Putative uncharacterized protein n=1 Tax=Clostri... 71 5e-11 UniRef50_C6JC89 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_3... 71 5e-11 UniRef50_B1QT82 Two component transcriptional regulator, AraC fa... 71 5e-11 UniRef50_C6J6V9 Response regulator n=2 Tax=Bacillales RepID=C6J6... 70 6e-11 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 70 6e-11 UniRef50_A8RS96 Putative uncharacterized protein n=5 Tax=Clostri... 70 6e-11 UniRef50_UPI0001C350B3 two component transcriptional regulator, ... 70 6e-11 UniRef50_A5TXQ0 Possible AraC family transcriptional regulator n... 70 6e-11 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 70 6e-11 UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16... 70 6e-11 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 70 7e-11 UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=F... 70 7e-11 UniRef50_C6LFA8 Two-component response regulator n=3 Tax=Clostri... 70 7e-11 UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacilla... 70 7e-11 UniRef50_D1N143 Transcriptional regulator, AraC family n=1 Tax=V... 70 7e-11 UniRef50_UPI0001B9ED0F transcriptional regulator, AraC family n=... 70 7e-11 UniRef50_C0EIY2 Putative uncharacterized protein n=1 Tax=Clostri... 70 8e-11 UniRef50_C6D742 Transcriptional regulator, AraC family n=1 Tax=P... 70 8e-11 UniRef50_B0NDZ7 Putative uncharacterized protein n=1 Tax=Clostri... 70 9e-11 UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pe... 70 9e-11 UniRef50_UPI0001692E78 DNA-binding response regulator, AraC fami... 70 9e-11 UniRef50_A6M1U3 Response regulator receiver protein n=1 Tax=Clos... 70 1e-10 UniRef50_C1I3E9 Response regulator receiver protein n=1 Tax=Clos... 70 1e-10 UniRef50_C6D416 Two component transcriptional regulator, AraC fa... 70 1e-10 UniRef50_C6J1Q8 Two component transcriptional regulator n=1 Tax=... 70 1e-10 UniRef50_UPI0001C358FB two component transcriptional regulator, ... 70 1e-10 UniRef50_C0EDG6 Putative uncharacterized protein (Fragment) n=1 ... 70 1e-10 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 70 1e-10 UniRef50_Q0TS33 Transcriptional regulator, AraC family n=6 Tax=C... 70 1e-10 UniRef50_A4XMI3 Two component transcriptional regulator, AraC fa... 70 1e-10 UniRef50_A9U743 Predicted protein n=1 Tax=Physcomitrella patens ... 70 1e-10 UniRef50_C0CWR9 Putative uncharacterized protein n=1 Tax=Clostri... 70 1e-10 UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M... 70 1e-10 UniRef50_C6J5Z3 Two component transcriptional regulator n=1 Tax=... 69 1e-10 UniRef50_C3WDI9 Two component transcriptional regulator n=2 Tax=... 69 1e-10 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 69 1e-10 UniRef50_UPI0001C35CCD helix-turn-helix domain-containing protei... 69 1e-10 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 69 2e-10 UniRef50_C6CVC0 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_C0ZHT4 Probable transcriptional regulator n=1 Tax=Brevi... 69 2e-10 UniRef50_C7PS75 Transcriptional regulator, AraC family n=1 Tax=C... 69 2e-10 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 69 2e-10 UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumil... 69 2e-10 UniRef50_A9KL59 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_A6TTZ3 Response regulator receiver protein n=1 Tax=Alka... 69 2e-10 UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein ... 69 2e-10 UniRef50_UPI00017895AE two component transcriptional regulator, ... 69 2e-10 UniRef50_UPI0001C34E2F two component transcriptional regulator, ... 69 2e-10 UniRef50_UPI0001851370 two component AraC family transcriptional... 69 2e-10 UniRef50_B8I425 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_C4G6T3 Putative uncharacterized protein n=1 Tax=Abiotro... 69 2e-10 UniRef50_C0AE24 AraC-type DNA-binding domain-containing protein-... 69 2e-10 UniRef50_UPI0001C360A5 transcriptional regulator, AraC family pr... 69 2e-10 UniRef50_C6CTB8 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_Q9KFJ6 Transcriptional regulator (AraC/XylS family) n=2... 69 2e-10 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 69 2e-10 UniRef50_C5RM76 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_C9XJN0 AraC-family transcriptional regulator n=8 Tax=Cl... 69 2e-10 UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacteriu... 69 2e-10 UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. ora... 69 2e-10 UniRef50_A5ZVI7 Putative uncharacterized protein n=3 Tax=Clostri... 69 2e-10 UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=... 69 2e-10 UniRef50_D1T9I8 AraC family transcriptional regulator n=1 Tax=Bu... 69 2e-10 UniRef50_C6PN49 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 69 2e-10 UniRef50_C0D3A6 Putative uncharacterized protein n=1 Tax=Clostri... 69 3e-10 UniRef50_C4Z2W7 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium el... 69 3e-10 UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ... 69 3e-10 UniRef50_UPI0001C363ED two component AraC family transcriptional... 69 3e-10 UniRef50_A5ZA57 Putative uncharacterized protein n=1 Tax=Eubacte... 68 3e-10 UniRef50_Q46N37 Transcriptional regulator, AraC family n=2 Tax=C... 68 3e-10 UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=A... 68 3e-10 UniRef50_A6WBM1 AraC-type transcriptional regulator domain prote... 68 3e-10 UniRef50_B4AK94 YbbB n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4... 68 3e-10 UniRef50_UPI000178A86D transcriptional regulator, AraC family n=... 68 3e-10 UniRef50_Q2B7S0 Transcriptional regulator (AraC/XylS family) pro... 68 3e-10 UniRef50_C6CT83 Two component transcriptional regulator, AraC fa... 68 3e-10 UniRef50_A3ZXN6 Probable transcriptional regulator n=1 Tax=Blast... 68 3e-10 UniRef50_A0AHP4 Complete genome n=16 Tax=Listeria RepID=A0AHP4_L... 68 3e-10 UniRef50_A8RM75 Putative uncharacterized protein n=2 Tax=Clostri... 68 3e-10 UniRef50_UPI000197B404 hypothetical protein BACCOPRO_02224 n=1 T... 68 3e-10 UniRef50_A4XHB8 Two component transcriptional regulator, AraC fa... 68 3e-10 UniRef50_C7H4C8 Two Component Transcriptional Regulator, AraC fa... 68 3e-10 UniRef50_D2LWA9 Two component transcriptional regulator, AraC fa... 68 4e-10 UniRef50_C9A5A5 Predicted protein n=1 Tax=Enterococcus casselifl... 68 4e-10 UniRef50_C0AAS5 AraC-type DNA-binding domain-containing protein-... 68 4e-10 >UniRef50_P77396 Uncharacterized HTH-type transcriptional regulator ypdC n=61 Tax=Enterobacteriaceae RepID=YPDC_ECOLI Length = 285 Score = 587 bits (1514), Expect = e-166, Method: Compositional matrix adjust. Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG Sbjct: 1 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60 Query: 61 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA Sbjct: 61 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120 Query: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD Sbjct: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM Sbjct: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG Sbjct: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 >UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=D2THV7_CITRO Length = 284 Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust. Identities = 232/284 (81%), Positives = 253/284 (89%) Query: 1 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60 MK PGLPADQQFFADLFSGLVLNPQ LGRVWFA+ +LP GSLC+D PRLDIVLRGEYG Sbjct: 1 MKQPGLPADQQFFADLFSGLVLNPQRLGRVWFATPGTALPGGSLCLDLPRLDIVLRGEYG 60 Query: 61 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120 N LE Q RLVEGEMLFIPARAANLP++ KPVMLLSLVFAP W GLSFYD+R+ SLL P Sbjct: 61 NQLEKSQHRLVEGEMLFIPARAANLPISEKPVMLLSLVFAPAWFGLSFYDTRSASLLRPL 120 Query: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 R+I+LP QRGEGEAMLTALTHLSRSP EQ IIQPLVLSLLHLCRSVVN PP +PR + Sbjct: 121 RRIELPHPQRGEGEAMLTALTHLSRSPQEQAIIQPLVLSLLHLCRSVVNTPPDIRRPRAE 180 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 FLYHSICNWVQDNYA+PL+RESVA FFNITPNHLS+LF +HGTM F++YVRWVRMAKARM Sbjct: 181 FLYHSICNWVQDNYARPLSRESVATFFNITPNHLSRLFTRHGTMSFVDYVRWVRMAKARM 240 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ILQKYHLS++EVAQRCG+ DSDYFCR+FRRQFGLTPGEY ARFQ Sbjct: 241 ILQKYHLSVNEVAQRCGYEDSDYFCRLFRRQFGLTPGEYRARFQ 284 >UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein n=58 Tax=Gammaproteobacteria RepID=Q7MFY0_VIBVY Length = 301 Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 101/280 (36%), Positives = 164/280 (58%), Gaps = 10/280 (3%) Query: 10 QQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQR 69 + F DL S ++ + +WFA + P S ++FPRL++VL GEY N +E+ ++ Sbjct: 22 EMMFDDLISSVLNERESFHHIWFAGDFHTPPEFSYQVNFPRLELVLDGEYINEMESHDRK 81 Query: 70 LVE-----GEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ 124 + + G+ +FIP+ N P + +LS++F LGLS R + IQ Sbjct: 82 VSKIVAKAGDAIFIPSNCWNKPNWDTDCSVLSMLFGRRQLGLSLVSKRKGEV--NFYDIQ 139 Query: 125 LPSLQRGEG---EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF 181 S+Q G + +L AL+ L+R ++ + + L+ +LL ++++N P S R Sbjct: 140 KHSIQTRSGFAIDNILEALSSLARENHKKPMDELLLQALLQYAKTMLNAPVEQSHNRVQD 199 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 LY IC ++Q+N+ +P+TRES+A F+I+ NHLS+LF Q G M +Y+ WVR+ +A+ + Sbjct: 200 LYQGICIYIQENFHRPITRESIASRFSISANHLSRLFRQQGHMTLADYITWVRVDRAKFM 259 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 L+KY+ ++EVA RCGF D +YFCRVF+ + G TP +Y A Sbjct: 260 LKKYNFKLNEVALRCGFKDVNYFCRVFKNRTGRTPTDYRA 299 >UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9U6_TOLAT Length = 284 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 98/279 (35%), Positives = 159/279 (56%), Gaps = 9/279 (3%) Query: 10 QQFFADLFSGLVLNP--QLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLL---- 63 QQ F D+FS + + ++ +A P + + FPRL+ VL G Y N+L Sbjct: 2 QQVFQDIFSVITEEELSEHTHQLVYAHDTCPPPQYAFQVTFPRLEWVLSGNYQNILCDSQ 61 Query: 64 -EAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYD-SRTTSLLHPAR 121 + +QRL G+ LF+PA N PV + V +LSL+F LGLS S+ + Sbjct: 62 GDKIEQRLTTGQFLFVPANCWNKPVWQEDVCVLSLLFGRRQLGLSLVSWSQQQQNFIDVQ 121 Query: 122 QIQLPSLQRGEGEAMLTALTHLSRSPLEQ-NIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 + P + +ML AL L S L+ +Q ++++L + +++ P R Sbjct: 122 KHSYPLSAKSPVHSMLQALIDLQASELQTPRSLQLQLMTVLTFTQELLHQPQPEKYQRAQ 181 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 ++ IC +VQ+N+ + ++RE+VA+ FNI+PNHLS+LF Q G M F +Y+ +VR+ +A+ Sbjct: 182 SVFQRICIYVQENFHKAISRETVARRFNISPNHLSRLFRQQGHMNFADYMVYVRIDRAKF 241 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +L++Y + + E+A RCGF D++YFCRVF+++ G TP EY Sbjct: 242 MLRRYPMHLEEIAHRCGFRDTNYFCRVFKKKTGRTPTEY 280 >UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBI1_VIBHO Length = 275 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 82/244 (33%), Positives = 142/244 (58%), Gaps = 4/244 (1%) Query: 40 PVGSLCIDFPRLDIVLRGEYGNLLEA----KQQRLVEGEMLFIPARAANLPVNNKPVMLL 95 P G+ ++F RL+++L GEY +++A K+ L +GEM++IP+ A + P +L Sbjct: 27 PQGAYQVNFNRLELILDGEYDLIVDARTGEKKLLLQQGEMVYIPSNAWSKPTWESTCKIL 86 Query: 96 SLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQP 155 S++F+ +G SF + ++ +P E +L AL +S + Sbjct: 87 SILFSKHQIGFSFVHHEVGNGFVDVQKYAMPLPTSMAVEHVLDALNSMSDESRSMVMAGH 146 Query: 156 LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 L +L+ C ++ P R + LY S+C +VQ+N+ + +TR SVA F ++ H+S Sbjct: 147 LANALVTYCNELLQGPQQEKVSRREKLYRSMCIYVQENFHKNITRTSVASRFGVSSAHVS 206 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 +LF Q G++R+ +YV +VR+ +A+ +L+KY+ + E+A RCGF D++YFCRVF+++ G T Sbjct: 207 RLFNQEGSVRYADYVTYVRLDRAKFMLKKYNFKVDEIAHRCGFKDTNYFCRVFKQKTGKT 266 Query: 276 PGEY 279 P EY Sbjct: 267 PSEY 270 >UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XZ22_KLEP3 Length = 287 Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 150/264 (56%), Gaps = 11/264 (4%) Query: 27 LGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGN-LLEAKQQRLVEGEMLFIPARAANL 85 +GRV+FA + S + +DFPRL+I+L G+ + L L ++L+IP + N Sbjct: 19 IGRVYFAGEMRSPAEPVVQVDFPRLNIILNGQLPDRALGENASPLEANDVLYIPGDSWNC 78 Query: 86 PVNNKPVMLLSLVFAPTWL--GLSFYDSRTTSLLHPARQIQLPSLQRGE--GEAMLTALT 141 P P +LLS++F L L ++ + +++ RQ +L+RG G +L AL Sbjct: 79 PQWQAPCLLLSILFDKQRLECSLQHWNGKAITVVE-KRQ----ALRRGPRVGSFLLQALN 133 Query: 142 HLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRE 201 L P EQ + +V+SLL C ++ + R L+ +I ++ +YA+PL+RE Sbjct: 134 ELRMQPQEQRTARSIVVSLLSHCHDLLG-SQAQTSSRSQALFEAIRQYMDAHYAEPLSRE 192 Query: 202 SVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDS 261 SVAQ F ++PN+LS LF + G M F EY+ +R+ +ARM+L+ + + + ++A CGF DS Sbjct: 193 SVAQAFYLSPNYLSHLFQKCGPMGFNEYLNHIRLEQARMLLKGHDMKVKDIAHACGFADS 252 Query: 262 DYFCRVFRRQFGLTPGEYSARFQG 285 +YFCR+FR+ +P EY ++ Sbjct: 253 NYFCRLFRKTTERSPSEYRRQYHS 276 >UniRef50_P32677 Uncharacterized HTH-type transcriptional regulator yijO n=33 Tax=Gammaproteobacteria RepID=YIJO_ECOLI Length = 283 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 144/271 (53%), Gaps = 8/271 (2%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 L S L+ P L +++FAS +P + +DFPRL+IVL GE+ + LV G++ Sbjct: 8 LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDV 65 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE--G 133 L++PA N P P S++F LG S + A+Q +RG G Sbjct: 66 LYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ---HVARRGPRIG 122 Query: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 +L L + P EQ + +V SLL CR ++ + R L+ +I +++ + Sbjct: 123 SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQI-QTASRSQALFEAIRDYIDER 181 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 YA LTRESVAQ F I+PN+LS LF + G + F EY+ R+ A+ +L+ Y L + EVA Sbjct: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 CGF DS+YFCR+FR+ +P EY ++ Sbjct: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 >UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae RepID=C3SIM7_ECOLX Length = 283 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 8/271 (2%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 L S L+ P L +++FAS +P + +DFPRL+IVL GE+ + LV G++ Sbjct: 8 LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDV 65 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE--G 133 L++ A N P P S++F LG S + A+Q +RG G Sbjct: 66 LYVAAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ---HVARRGPRIG 122 Query: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 +L L + P EQ + +V SLL CR ++ + R L+ +I +++ + Sbjct: 123 SFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQI-QTASRSQALFEAIRDYIDER 181 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 YA LTRESVAQ F I+PN+LS LF + G + F EY+ R+ A+ +L+ Y L + EVA Sbjct: 182 YASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVA 241 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 CGF DS+YFCR+FR+ +P EY ++ Sbjct: 242 HACGFVDSNYFCRLFRKNTERSPSEYRRQYH 272 >UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=Klebsiella RepID=B5XY24_KLEP3 Length = 277 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/255 (35%), Positives = 141/255 (55%), Gaps = 11/255 (4%) Query: 29 RVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNL-LEAKQQRLVEGEMLFIPARAANLPV 87 +V F S+P + + FPRL+IVL G+ L L ++L++ A LP Sbjct: 20 QVRFPEPDISVPALAFNVPFPRLEIVLEGQLNEQGLPLAASTLTTLQVLYVQAGKWTLPQ 79 Query: 88 NNKPVMLLSLVFAPTWLGLSF--YDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSR 145 P LS++F LG S +D + LH +Q + L G +L +L +S Sbjct: 80 WTGPATTLSILFGRQKLGFSIQRWDGKC---LHTEKQ-SVSRLGPRVGSYLLLSLNEVSL 135 Query: 146 SPLEQNIIQPLVLSLLHLCRS-VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 P + + +V +LL CR +V + S+ R FL ++ +++++N + PLTRESVA Sbjct: 136 QP-DPLTARLVVAALLSHCREQLVGLEMRVSRSRDLFL--AVQDYLEENLSLPLTRESVA 192 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 + F+ITPN+LS +F + G++ F EY+ VR+ KA+ +L+ Y L + E+A CGF DS+YF Sbjct: 193 KRFHITPNYLSHIFQKSGSVGFNEYLTRVRLEKAKQLLRGYDLKVKEIAHNCGFVDSNYF 252 Query: 265 CRVFRRQFGLTPGEY 279 CRVF+R +P EY Sbjct: 253 CRVFKRYTERSPSEY 267 >UniRef50_C8QGZ7 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QGZ7_9ENTR Length = 285 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 80/288 (27%), Positives = 145/288 (50%), Gaps = 24/288 (8%) Query: 12 FFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLV 71 F + S L V A+ A P + + PR++++++G LL + ++V Sbjct: 4 FIQSILSEFSLQCATTESVLVANGNAQPPAMAYHLHVPRIELIVKGTLSMLLPKGEDKIV 63 Query: 72 E-----GEMLFIPARAANLPVNNKPVMLLSLVF--------APTWLGLSFYDSRTTSLLH 118 + G + +IPA + N P+ PV+ +S+VF W G F + +L + Sbjct: 64 KYLRPVGTVTYIPANSWNSPLWGSPVICMSIVFWKQDVGFSISNWDGTQFKEVEKFNLEN 123 Query: 119 PARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPR 178 + ++ L+ E A TH + +I+ L+ LL+ + G S + Sbjct: 124 SSSSVRDRLLELAES----LAWTHNNSGETFAHIVYALLNDLLY------QITDGMSNAK 173 Query: 179 GDF-LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAK 237 G L I + + +Y + RESVA+ FNI+P +LS+LF++ ++F EY++ R+++ Sbjct: 174 GPLSLLDEIKSHIDSHYQADINRESVAETFNISPGYLSRLFSRESDVKFNEYLKLARISR 233 Query: 238 ARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 ++ +L +L I+EV+++CGF D++YFC+VFR TP EY + +G Sbjct: 234 SKTLLTSTNLKINEVSEKCGFTDTNYFCKVFRDINDCTPLEYRRKNKG 281 >UniRef50_Q7NVM9 Probable transcriptional regulator, AraC family n=1 Tax=Chromobacterium violaceum RepID=Q7NVM9_CHRVO Length = 272 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 82/261 (31%), Positives = 133/261 (50%), Gaps = 2/261 (0%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEA-KQQRLVEGEMLFIPARA 82 P L R+ A +P G+ + FPRL++VL Y E + L E LFIPA Sbjct: 12 PSALQRLCHAPAGKHMPAGAYQVHFPRLELVLSNRYHYSHEGCENASLSAQEALFIPAEH 71 Query: 83 ANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 LP +L ++F +G S S ++ ++ + + QRG ML L Sbjct: 72 WTLPNWCANGEVLHILFDYARIGFSLVRSGPQGVISTHKESMVLA-QRGSLNGMLDVLAG 130 Query: 143 LSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 L R + +++ +LL L +S+ + + +G L+ +IC ++ ++ PLTRE Sbjct: 131 LCRDGADPEVLRLQGQALLALLQSLYDEARDSQWQQGGNLFRAICLYISEHLYAPLTRED 190 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 VA F+I+ HLS+LF QH + F E++ R+ A+ +L++ L + VA RCG+ D + Sbjct: 191 VALRFSISATHLSRLFRQHLGLGFCEFLSHARLDLAKALLRQGQLPLSRVAARCGYADVN 250 Query: 263 YFCRVFRRQFGLTPGEYSARF 283 YF RVF+++F +TP Y F Sbjct: 251 YFHRVFKQRFAMTPCAYRREF 271 >UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC family n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZE29_EDWTE Length = 275 Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 78/245 (31%), Positives = 134/245 (54%), Gaps = 21/245 (8%) Query: 49 PRLDIVL------RGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPT 102 PRL+IV+ R E+G A +QR G++L++P+ ++ LLSL+FA Sbjct: 35 PRLEIVIAGSLLRRDEHGR---AYRQRC--GDVLYLPSGEQRQITGDEEATLLSLLFAKQ 89 Query: 103 WLGLSFYDSRTTSLLHPARQIQLPSLQRG--EGEAMLTALTHLSRSPLEQNIIQPLVLSL 160 + L+ + L R+ Q +RG G +L AL + P Q + V +L Sbjct: 90 RIVLTLWQWDGAQL---QRRQQTQIARRGPRTGTFLLQALNEQAMQPAAQATARLTVSAL 146 Query: 161 LHLCRSVVNMPPGN--SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLF 218 L C ++ G+ + P L ++I +++ D+Y L+R++VA+ F+ITPN+LS+LF Sbjct: 147 LSHCSDLL---AGHLRTAPHRQALLNAIRDYIDDHYMDALSRDAVARRFHITPNYLSQLF 203 Query: 219 AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGE 278 + F Y+ VR+ +A+ +L++Y ++I +A CG+ DS+YFCR+FR++ TP E Sbjct: 204 QRADGGGFNHYLNHVRLEQAKTLLKEYEMTIKAIAHACGYDDSNYFCRLFRQRTERTPSE 263 Query: 279 YSARF 283 Y ++ Sbjct: 264 YRRQY 268 >UniRef50_C4LFY1 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFY1_TOLAT Length = 285 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 79/112 (70%) Query: 172 PGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVR 231 P +QPR L+ I N+V DN+ + LTR+SVA+ F I+ +LS+LF + +RF EY+ Sbjct: 167 PLTTQPRRKSLFEEIRNYVDDNFYKDLTRDSVAKEFLISSTYLSRLFQKEADLRFNEYLN 226 Query: 232 WVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 ++R+ KA+ +L+++ + + +VA++CGF DS+YFCR+F+ + +P EY A++ Sbjct: 227 YIRLEKAKSMLKRHDVKVKDVARKCGFNDSNYFCRLFKEKTDRSPSEYRAQY 278 >UniRef50_A6DLX0 Transcriptional regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLX0_9BACT Length = 282 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%) Query: 77 FIPARAANLPVNNKPVMLLSLVFAPTWLGLSF------YDSRTTSLLHPARQIQLPSLQR 130 F+P + NLP PV +++L+F ++ YD S + I L Sbjct: 72 FMPKNSWNLPDWELPVKVVTLLFNDDGFICNYVNTQGGYDHSKLS----QKSIYWSGL-- 125 Query: 131 GEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLC-RSVVNMPPGNSQPRGDFLYHSICNW 189 EG +L L + L++ I LV +LL C S N S + + + +I + Sbjct: 126 -EGHTVLNLLKASPKHDLQKPYIH-LVNALLFYCLNSSSNQLENKSSSKAENTFKNIYLY 183 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 +++NY+ +RE VA F +TPN++S LF M F ++ +R+ +A +L+K++ +I Sbjct: 184 LEENYSLVNSREDVATNFKLTPNYISHLFKSQTGMSFSHHLTTIRINQACYLLKKFNQNI 243 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 E+A+ CG+ ++ YFCRVF++ G TP Y Sbjct: 244 DEIARVCGYHETSYFCRVFKKIKGHTPSAY 273 >UniRef50_C0A2N9 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A2N9_9BACT Length = 354 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 112/269 (41%), Gaps = 35/269 (13%) Query: 45 CIDFPRLDIVLRGEY---GNLLEAKQQRLVE-GEMLFIPARAANLPVNNKPVMLLSLVFA 100 C FPR VL GEY ++ + R+V GE+ +I NL N+ P ++ ++ F Sbjct: 73 CTMFPRFIFVLEGEYRVIHDINDRSADRVVRTGELYWIRPNDWNLVRNDAPRVVFAVSFT 132 Query: 101 PTWLGLSFYDSR-----------TTSLLHPA--RQIQLP---SLQRG-----EGEAMLTA 139 P +Y + T + H +P +L+ E + + Sbjct: 133 PDHTRFLWYHHKREPENSNVCLDTDNAFHTELWYHTHVPVSVALRYAIGLIDEATTLDAS 192 Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPP---------GNSQPRGDFLYHSICNWV 190 L L Q ++ +LL C ++ G P + IC W+ Sbjct: 193 LGKLGTDSERQELLHTTGEALLAWCLQELHADAQLAESARFSGTVSP-SRRTFDEICAWI 251 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 + L R SVA F ++ +HL++LF H F+E+VR R A +L LSI Sbjct: 252 TERLQHDLERHSVASIFRVSEDHLTRLFRTHAHCGFVEFVRAERFRLAERLLADSRLSIK 311 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 EVA CGF S YF + FR+Q GLTP + Sbjct: 312 EVAAACGFSLSAYFIKRFRQQHGLTPAAW 340 >UniRef50_A3GSD5 Transcriptional regulator (Fragment) n=1 Tax=Vibrio cholerae NCTC 8457 RepID=A3GSD5_VIBCH Length = 188 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 10/188 (5%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 F DL S ++ + +WFA + P S ++FPRL++VL GEY N +E+ +++ + Sbjct: 3 FDDLISSVLNERESFHHIWFAGDFHTPPEFSYQVNFPRLELVLGGEYINEMESHDRKVTK 62 Query: 73 -----GEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPS 127 G+ +FIPA N P + +LS++F LGLSF R IQ S Sbjct: 63 IIAKAGDAIFIPANCWNKPNWDTDCSVLSMLFGRRQLGLSFVSKRKGEA--NFYDIQKHS 120 Query: 128 LQRGEG---EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYH 184 +Q G + +L AL+ L+R ++ + + L+ +LL ++++N P Q R LY Sbjct: 121 IQTRSGFAIDNILEALSSLARENYKKPMDELLLQALLQYTQTMLNAPTEQPQNRVQDLYQ 180 Query: 185 SICNWVQD 192 IC ++Q+ Sbjct: 181 GICIYIQE 188 >UniRef50_C6IVE2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVE2_9BACL Length = 215 Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 62/94 (65%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + ++++++Y +PLT S+++ F+ P++LS F+ H F EY+ VR+AKA+ +L+ Sbjct: 113 LLDYIEEHYGEPLTLSSLSRHFHFNPSYLSSYFSAHNDEGFSEYLNRVRIAKAKELLRSD 172 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L I E+ R G+ D YF +VF++Q GL+P EY Sbjct: 173 GLPISEIGSRVGYSDPSYFTKVFKKQMGLSPREY 206 >UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicutes RepID=Q2BDI9_9BACI Length = 525 Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 1/118 (0%) Query: 162 HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQH 221 HL R V ++ + D LY + +++ +YA+ LT ES A++ +++P + SKLF Sbjct: 405 HLLRIVRHVQAWRNSHAKDMLYKA-KEYIEAHYAEALTLESAAEYVDLSPFYFSKLFKDR 463 Query: 222 GTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 M FI++V VR+ KA+ L++ LS+ E+ G+ D +YF RVF++ GL+P EY Sbjct: 464 FGMTFIDFVTDVRIRKAKHFLKEGSLSLKEICYSIGYKDPNYFSRVFKKHTGLSPTEY 521 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 74/127 (58%), Gaps = 4/127 (3%) Query: 159 SLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLF 218 ++ C S+ + ++ R + L +++Q+NY++ ++ + V++ N++P + SK+F Sbjct: 409 KMMQTCCSIRD----KNEDRSESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIF 464 Query: 219 AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGE 278 + F EY+ +R+ KA+ +L+ LSI E+ G+ D +YF R+F++ G+TP E Sbjct: 465 KEESGENFTEYLTNIRIGKAKELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPRE 524 Query: 279 YSARFQG 285 Y R+ G Sbjct: 525 YRERYYG 531 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 62/98 (63%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++ +YA+PLT E VA+ I+P + SKLF +H + FI+YV VR+ +A+ L + Sbjct: 415 DYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAETDQ 474 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 S+ E+ G+ D +YF RVF++Q GL+P EY + Q Sbjct: 475 SLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQA 512 >UniRef50_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Z3_9FIRM Length = 420 Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 81/141 (57%), Gaps = 2/141 (1%) Query: 139 ALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPL 198 +L L+R E +QPL+ + V + G++ + + ++Q + ++ L Sbjct: 278 SLLGLARCCRENAHLQPLLT--VEQPIQFVEVNEGDATAGKMQVVAQVQEYIQSHLSERL 335 Query: 199 TRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGF 258 T VA FN +PN+LS+LF ++G F+EY+ R+A A+ +L++ L ++E+A++ G+ Sbjct: 336 TLADVAAVFNFSPNYLSQLFGKYGDSGFVEYITETRIAAAKEMLEQGDLKVYEIAEKLGY 395 Query: 259 PDSDYFCRVFRRQFGLTPGEY 279 + YF +VF++ GL+P EY Sbjct: 396 ESAFYFSKVFKKVTGLSPREY 416 >UniRef50_UPI0001C368F3 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368F3 Length = 538 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 84/145 (57%), Gaps = 5/145 (3%) Query: 141 THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ-PLT 199 TH+ + E++I Q VL ++ VN+ + RG+ L H+I ++ +N ++ LT Sbjct: 393 THILKLTDEKDIRQ-YVLQMVRFTLYQVNLY---TDARGNKLIHTILQYLNENLSKSTLT 448 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 + +A+ + P++LS++F + M F++Y+ +R+ KA+ +LQ +L I+E+A+ G Sbjct: 449 LKKIAEINYVNPSYLSRIFKEVTQMNFVDYLATLRIEKAKRLLQTGNLRIYEIAESVGIS 508 Query: 260 DSDYFCRVFRRQFGLTPGEYSARFQ 284 D +YF ++F++ +TP +Y Sbjct: 509 DPNYFSKLFKKYTNMTPAQYKEEIH 533 >UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostridium butyricum RepID=B1QUU6_CLOBU Length = 351 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 62/94 (65%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++ +NY++ +T ESV++ N++ +LSKLF ++ M+FI+Y+ ++ KA+ +L+ +S Sbjct: 252 YISENYSEKITLESVSKACNLSVFYLSKLFKKNTGMKFIDYINLYKIEKAKQLLENTDMS 311 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 I ++ G+ +S YF +VF++ G+TP Y + Sbjct: 312 IINISMSLGYDESGYFSKVFKKVVGVTPSAYRNK 345 >UniRef50_A8R814 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R814_9FIRM Length = 498 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 64/102 (62%), Gaps = 1/102 (0%) Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 Y ++++NY +P+T +VA+ +ITP +LS+L +HG F E V + R+ KA+ ++ Sbjct: 395 YKKALTYIEENYHKPITLVTVAEHLSITPFYLSRLINKHGKESFTEIVNFQRIKKAKQLI 454 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ++ + S E+ + GF YF ++F++ ++PGEY +RF+ Sbjct: 455 EEGY-SFKEITYQVGFTSQSYFTKIFKKLVQMSPGEYKSRFE 495 >UniRef50_A8MKS9 Two component transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MKS9_ALKOO Length = 253 Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 3/102 (2%) Query: 186 ICNWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 I N++ NY Q L+ + VA F+I+ ++L KL FIEY+ VRM A+ ILQ+ Sbjct: 149 IKNYIDGNYMQEDLSMQEVADRFDISLSYLGKLMKHELGKTFIEYLTEVRMESAKKILQE 208 Query: 245 --YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ++ IHEVAQ G+ YF RVF+++ G+TP EY + Sbjct: 209 ENINIKIHEVAQLVGYSSQHYFSRVFKKEIGITPIEYKQNIK 250 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 78/139 (56%), Gaps = 1/139 (0%) Query: 148 LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 L+ N + + ++ +++ ++ + D I +++DN+ + +T + VA+ Sbjct: 392 LKINDVDKIKFIFINTLKNLFENIKTINKEKMDTFIAKIIRFIEDNFNKDITLDDVAKEV 451 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 N++ ++ SK F FI+Y+ +R+ KA+ +L+ +SI EV + G+ D +YF ++ Sbjct: 452 NMSYHYFSKFFKDQTGKNFIDYLTNLRVTKAKELLEDETVSIKEVCYKVGYSDPNYFSKI 511 Query: 268 FRRQFGLTPGEY-SARFQG 285 F++ G+TP EY SA ++G Sbjct: 512 FKKATGMTPTEYRSAIYKG 530 >UniRef50_B8I0K9 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I0K9_CLOCE Length = 532 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 5/105 (4%) Query: 183 YHSICN----WVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAK 237 Y SI N ++Q N++ ++ SV+ + N++P+H S +F+Q FIEY+ VR+ K Sbjct: 427 YDSIINKAKEYIQSNFSNSAISLNSVSSYVNVSPSHFSTIFSQEAGENFIEYLTKVRVKK 486 Query: 238 ARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 A +L+ L E+A G+ D YFC +F++ G+TP EY + Sbjct: 487 AMELLKTTSLKSSEIAYSVGYNDPHYFCYIFKKAIGVTPKEYRSE 531 >UniRef50_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1J0_9CLOT Length = 544 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 2/181 (1%) Query: 105 GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLC 164 GL++ + + L +L + + + E + L L R ++ ++ L Sbjct: 358 GLTYTNVKIMCLDIYMLAAKLLAEKGKDTETAVKMLERLDRQAVKNTALEEFRKYLEQTL 417 Query: 165 RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTM 224 + + G L I +V ++Y++ ++ ++A F I P++LS+LF + M Sbjct: 418 CVISRQFDDRKKSSGKTLITDILAYVDEHYSKDVSLGTIAGKFFINPSYLSQLFKKEMNM 477 Query: 225 RFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +FI+Y+ VR+ KA ++L+ L+++EVA+ G+ D+ YF +F + G TP +Y R + Sbjct: 478 KFIDYITDVRIKKALVLLETTSLTVNEVAEAVGYKDTRYFREIFVKHMGKTPSQY--RME 535 Query: 285 G 285 G Sbjct: 536 G 536 >UniRef50_C6CV61 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV61_PAESJ Length = 532 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%) Query: 143 LSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 ++RS LE +I+ L + L + + GN L+ SI +V +++ ++RES Sbjct: 399 MARSGLE-HIVATLTDTALKIADQLSARKNGNK------LFESILAYVHEHFRLDISRES 451 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 VA+ +TP ++S LF Q FIEY+ +R+ A +L+ L I ++A G+ D Sbjct: 452 VAREVYVTPGYISYLFKQQMQTSFIEYLHRIRIEYASRLLKDPSLRISDIAHESGYQDEK 511 Query: 263 YFCRVFRRQFGLTPGEY 279 YF +VF++ G+TP +Y Sbjct: 512 YFFQVFKKHTGMTPTQY 528 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 1/113 (0%) Query: 170 MPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEY 229 + NS G + S N++++NY +T E VA+ +I+P +LSKLF + M F+ Y Sbjct: 138 ITAKNSIQDGKVI-QSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSY 196 Query: 230 VRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 V +M KA+ +L+ L + +A + + +YF +VF++ G+TP EY R Sbjct: 197 VTEKKMQKAKELLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKR 249 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 78/140 (55%), Gaps = 5/140 (3%) Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 L+ L + E+ Q V +++ L ++VV N +P G + ++++ N+ + ++ Sbjct: 387 LSALLAAGEEETARQKFVAAMVELAQAVV---IKNQEPDG--IITRAQDYIRQNFRKDIS 441 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 E VA+ I+P + SKLF + M F EY+ +R+ A+ +L + LSI +V G+ Sbjct: 442 LEEVARTVGISPYYFSKLFKEEAGMNFTEYLTGIRIETAKRLLSERELSIKQVCVDSGYA 501 Query: 260 DSDYFCRVFRRQFGLTPGEY 279 + +YF R+F++ G+TP E+ Sbjct: 502 NPNYFSRIFKKWVGITPTEF 521 >UniRef50_C0A4T0 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4T0_9BACT Length = 353 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 F + + C +++D+ +PL RE+VA F + PNH+S+LFA+ F +YV R+ +AR Sbjct: 254 FRWQAACQFIRDHLHEPLGRETVASFLQLHPNHISRLFARFSKAPFNQYVMSERIRRARH 313 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 +L+ L++ ++A CGF D +YF R +R+ G P Sbjct: 314 LLKNPGLNLADIAAACGFSDPNYFSRCYRKVVGRAP 349 >UniRef50_Q2BC36 Two-component response regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BC36_9BACI Length = 515 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 60/98 (61%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I +++++Y +P+T A+ F+ P++LS F+ H FIE + +R+ +A +L + Sbjct: 415 IIEYMKEHYTEPITLTEAARHFHFNPSYLSSYFSAHNEGSFIEQLNKIRIEEASKLLLEG 474 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +I E++ GF D YFCRVF+++ GL+P +Y ++ Sbjct: 475 EATISEISGLVGFSDHSYFCRVFKKRTGLSPSQYKRKY 512 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 15/265 (5%) Query: 29 RVWFASQPASLPVGSLCID-FPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV 87 ++ FA + A + + + +L G L+ LV G+ + IP A + V Sbjct: 14 KIDFAERDADFHMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMHRFV 73 Query: 88 N--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQ---IQLPSLQRGEGEAMLTALTH 142 N V +L F + S + S T +L + L SL +G + L Sbjct: 74 YDCNSTVKRYNLFFTMDFAA-SLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTLYQ 132 Query: 143 --LSRSPLEQNII---QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP 197 + + Q +I L+LSLL R + + +S + ++ ++ +P Sbjct: 133 ETVGQDSCSQAVIPAYISLILSLLVRNRDHIQLQDLDSAENA---IQASARYISTHFQEP 189 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 ++ VA + +++P + SK F Q + F EY+ R+ +A +L L++ E+A RCG Sbjct: 190 VSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRCG 249 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSAR 282 F D +YF FR++FGL+P +Y R Sbjct: 250 FNDGNYFGDAFRKEFGLSPLQYRKR 274 >UniRef50_C0D484 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D484_9CLOT Length = 419 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 65/111 (58%), Gaps = 1/111 (0%) Query: 169 NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIE 228 ++P N+ D++ + ++ NY + ++ + A+ I+P +LS +F + F+E Sbjct: 293 DLPADNADKIKDYV-ETAKQYIDSNYIRDISLMACAESVGISPYYLSHIFKEKTGSTFVE 351 Query: 229 YVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 Y+ VRM +A+ + + L++ +++ RCG+ ++ YFC+VF+R G T G Y Sbjct: 352 YLTAVRMDRAKELCRNQKLTVKDISDRCGYINTTYFCKVFKRNVGKTIGAY 402 >UniRef50_C6CWQ4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWQ4_PAESJ Length = 538 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Query: 152 IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITP 211 +I+ ++ L + +S+ + G+ G+ W+Q +YA+ LT E A+ F+ P Sbjct: 401 LIELMLGRLAEVHKSLTDRKQGS----GELAVEQCLGWIQGHYAEDLTLEMAAEQFHFNP 456 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 ++ S L F +++ R+ A+ +L I+E+A++CG+ D+ YF R+F+RQ Sbjct: 457 SYFSTLMKSRTGRSFSDHLTEARIRAAKELLAGGRFKIYEIAEQCGYRDTKYFTRIFKRQ 516 Query: 272 FGLTPGEY 279 GL+P Y Sbjct: 517 VGLSPEAY 524 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 68/131 (51%) Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 I+ L L R + + + + ++ +N+ + ++ + V++ +I+P Sbjct: 400 IENLKKWFLDKTREICTKLENSKEKEAGSIIDRAKEYINENFRRDISLDDVSREVDISPY 459 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 + SKLF Q FIEY+ +R+ AR +LQ LSI E+ + G+ D +YF R+F++ Sbjct: 460 YFSKLFKQETGKNFIEYLTEIRLKNARELLQDSRLSIKEICAQSGYSDPNYFSRIFKKYE 519 Query: 273 GLTPGEYSARF 283 G+TP E+ R Sbjct: 520 GVTPSEFRERL 530 >UniRef50_UPI0001787DEA transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787DEA Length = 290 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 23/256 (8%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL----PVNNKPVMLLSLVFA-- 100 DF + + GE + +E QR+ +G M +IP ++ N KP+++ + +F+ Sbjct: 37 DFLEIAYIAEGEGFHHMENSVQRVRKGHMFYIPLGMPHVFRPTSSNGKPLIVNNCIFSVK 96 Query: 101 --PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQ---- 154 P + + DSRT SLL +Q++ +L L S EQ +Q Sbjct: 97 LLPKLIAFA-SDSRTASLL---KQMEDGTLGYRAITDRHDRFEKLFVSLYEQYAMQISGS 152 Query: 155 -----PLVLSLL-HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFN 208 L+L L+ R++ + P S+P +H + +V+ Y LT +AQ Sbjct: 153 AVYLHTLLLQLIIEFSRAIEHSQPITSEPSHP-SFHDVLQYVEGQYMHELTLTRLAQISG 211 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 + HL +LF ++ + Y++ VR+ +R +L+ I +A++ G+ D F VF Sbjct: 212 FSERHLQRLFRRYTGQSWHHYLQTVRIRMSRELLRTTTDKISMIAEKVGYKDMHSFNSVF 271 Query: 269 RRQFGLTPGEYSARFQ 284 +R GLTPG+Y + Q Sbjct: 272 KRSTGLTPGQYRSETQ 287 >UniRef50_B9MP59 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=B9MP59_ANATD Length = 502 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 79/137 (57%) Query: 148 LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 LE + ++ + ++L C ++N + + + ++++NY + LT +SVAQ F Sbjct: 364 LEFSNVEDIEKNMLKFCEGILNKFRQWKTSLSNGIMSELEKYIKENYNKNLTLKSVAQKF 423 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 + P +L +LF +H M F Y++ +R+ +A+ +L ++ I+E++Q G+ D+DYF + Sbjct: 424 YLNPVYLGQLFKKHYGMYFNSYLQKIRVEEAKRLLMSTNMKIYEISQAVGYNDTDYFIQC 483 Query: 268 FRRQFGLTPGEYSARFQ 284 F + +TP ++ +++ Sbjct: 484 FTKFCNMTPNQFRKKYR 500 >UniRef50_C5RGL0 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGL0_CLOCL Length = 533 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 66/115 (57%) Query: 166 SVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMR 225 S++N + +GD + C +V ++ + +T S++ + NI+ N+ +F + Sbjct: 415 SLINAIKEYNLNQGDNIVQKACEYVLNHLEEDITLTSISNYLNISKNYFCSIFKKQTGEN 474 Query: 226 FIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 F+EY+ +M +A+++L+K+ ++EV+ G+ ++ YF ++F++ G TP EY Sbjct: 475 FLEYLTKAKMDRAKILLKKHDYKVYEVSDVLGYKETAYFSKLFKKHTGYTPAEYK 529 >UniRef50_C6J2Y7 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2Y7_9BACL Length = 118 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 66/109 (60%) Query: 174 NSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 +S G + ++ +++ +YA+P+ + +A+ F I PN+ SK F + F++Y+ + Sbjct: 6 HSSLEGKEIMEAVRLYLEQHYAEPIQLQMIAERFFIHPNYFSKRFKEKYGESFVDYLNSI 65 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 RM +A +L + +L I E+++R GF D+ YF VFR+ +G TP +Y R Sbjct: 66 RMKEAAALLGETNLKIREISERVGFEDAAYFSSVFRKWYGETPKQYRER 114 >UniRef50_C0AA65 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AA65_9BACT Length = 288 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 2/108 (1%) Query: 172 PGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVR 231 P +S+ +L + C + N+ + + RESVA I P HLS+LF++ F +Y+ Sbjct: 183 PASSKAHATYL--AACAGISRNFDRSINRESVASELRIHPQHLSRLFSRFTGRTFSQYLL 240 Query: 232 WVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 R+ KA ++L+ ++ EVA CGF YF R FRR +G TPG + Sbjct: 241 EFRLKKAAVLLEGKGRTVAEVAAACGFGSDAYFVRCFRRHYGHTPGAH 288 >UniRef50_Q2RGN4 Two component transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN4_MOOTA Length = 548 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 64/117 (54%) Query: 160 LLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFA 219 +L ++V + R L +++ N++Q LT E VA+ ++P + SKLF Sbjct: 416 ILERLMALVAQVAETREQRNSSLIDRASKYIEANFSQDLTLEEVARQVYLSPCYFSKLFK 475 Query: 220 QHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 Q + FI+Y+ VR+ AR +L L + E+A R G+ D+ YF +VF++Q G TP Sbjct: 476 QFKGLNFIDYLTKVRLKAARELLLNTKLPVAEIATRVGYRDARYFGQVFKKQEGYTP 532 >UniRef50_A8RUC8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUC8_9CLOT Length = 479 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 60/92 (65%) Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 + +Y +P++ SVA+ NITP +LS+LF + + F++Y+ RM +A+ +LQ ++ I Sbjct: 383 IDKSYKEPISLNSVAEQLNITPQYLSRLFMKEMSRSFVDYLTSYRMERAKSLLQDTNMKI 442 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + + + G+ D+ YFC +F++ G+TP +Y A Sbjct: 443 NMICVQVGYQDAKYFCTLFKKITGVTPNQYRA 474 >UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and AraC-type DNA-binding domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK9_ANOFW Length = 428 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 58/91 (63%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++Q+NY +T E VA++ ++TP + SKLF + FI+YV +R+ KA+ +++ L+ Sbjct: 330 FLQENYCYDVTLEEVAKYVHLTPYYFSKLFKKETGQTFIDYVTHLRIEKAKQLMRDEGLT 389 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + E R G+ D +YF RVF++ +TP EY Sbjct: 390 VKEACYRVGYKDPNYFSRVFKKVTNMTPTEY 420 >UniRef50_C5EQZ1 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQZ1_9FIRM Length = 534 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 60/96 (62%) Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 + I N ++ Y + + E +A+ FNITP +LS LF + +++ Y V++ A+ +L+ Sbjct: 436 NEILNIIEKEYKENILVEEMARRFNITPEYLSTLFVRELGIKYTAYCTQVKIEHAKKLLR 495 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 ++ I+EVA++ G+ D YFC+VF++ G +P EY Sbjct: 496 NSNMKIYEVAEQSGYMDVKYFCKVFKKYTGKSPKEY 531 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++ ++Y PLT E VA++ I+P + SKLF M FI+YV VR+A+A+ + + Sbjct: 416 DYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFIDYVTEVRIARAKKEMADPNK 475 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 S+ E+ G+ D +YF RVF++ G++P EY + Sbjct: 476 SLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRKKLH 512 >UniRef50_Q5QL43 Two-component response regulator n=2 Tax=Geobacillus RepID=Q5QL43_GEOKA Length = 258 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 55/100 (55%) Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 S ++QDNY PLT VA ++ +H S+LF M F+EY+ VR+ K++ +L+ Sbjct: 150 SALRYIQDNYHLPLTLNEVASMVYLSQSHFSRLFKSATGMTFVEYLTQVRIQKSKYLLKM 209 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 L I +A + GF ++ YF F+R G TP EY Q Sbjct: 210 SSLPIDVIAHKTGFSNASYFATTFKRLEGKTPTEYRELLQ 249 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 59/100 (59%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 ICN++ ++YA+PL+ E VA + H ++LF Q+ F +Y+ R+A A+ +L Sbjct: 186 ICNYINEHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLLVDK 245 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 +LS+ +++ +CGF + F R+FR+ G TP E + G Sbjct: 246 NLSVLDISLQCGFSNLSSFLRMFRKLTGFTPTELRKMYDG 285 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 62/103 (60%), Gaps = 2/103 (1%) Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 + + ++ N+ +T + VA N + ++LSKLF + + F Y+ +R+ KA+ IL Sbjct: 144 FQEVVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEIL 203 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY--SARF 283 ++SI+E+A G+ + +YFC+VF++ +TP EY ++RF Sbjct: 204 INSNISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYRTNSRF 246 >UniRef50_A0AHT2 Complete genome n=15 Tax=Listeria RepID=A0AHT2_LISW6 Length = 183 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 56/91 (61%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +++ N + +T E VA + ++P +LSKLF + FI YV +M A+ L+K + Sbjct: 88 YIKKNIHRSITLEEVANYVYLSPFYLSKLFKNELNINFINYVNEQKMLYAKEQLEKSDWA 147 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +H +A+ GF + YFC+VF++QF +TP EY Sbjct: 148 VHTIAKNLGFSRASYFCKVFKKQFDMTPKEY 178 >UniRef50_C6JC74 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC74_9FIRM Length = 240 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 61/101 (60%) Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 + + N ++++Y L +++A+ F++TP +L LFA+ + F Y+R VRM KA+ + Sbjct: 137 IVREMINVIEESYGMKLQLDAIAEKFHMTPEYLGNLFAKETGITFSNYLRQVRMEKAKEL 196 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L + I+EVA G+PD YF +VF+ G++ +++ + Sbjct: 197 LTGTDMKIYEVACAVGYPDQKYFSKVFKEYAGVSAKQFALK 237 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 57/92 (61%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 ++Q++YA PLT E V+ + ++ S LF + F+EY+ VRM +A+ +L++ +L Sbjct: 437 QYIQEHYADPLTLEWVSNIVGFSGSYFSSLFKKETGQNFLEYLSEVRMNRAKELLRETNL 496 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 S+ EV R G+ D YF + F++ GL PGE+ Sbjct: 497 SVAEVCVRVGYSDLKYFTKSFKKATGLKPGEF 528 >UniRef50_C6CZ23 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ23_PAESJ Length = 522 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 57/94 (60%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + +++ ++YA+ L +A+ F+ P++LS F+ H F++Y+ VR+ KA +L+ Sbjct: 423 LLDYIHEHYAESLNLTEMAKHFHFNPSYLSSYFSTHHNEGFVDYLHRVRLEKASELLRAG 482 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 SI E++ G+ D YFC+VF++ GL+P Y Sbjct: 483 EASISEISGMVGYSDHSYFCKVFKKHTGLSPSRY 516 >UniRef50_C6LKL3 Putative response regulator receiver domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LKL3_9FIRM Length = 538 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 62/100 (62%) Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 +F+ ++ ++ N + LT A FNI+PN+LS+LF ++ + F EYV ++ A+ Sbjct: 431 NFMVENVTKYIASNIDKRLTLHDTALTFNISPNYLSQLFKKYRNVGFNEYVTQQKINAAK 490 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +LQ+ L ++E+A R GF ++ YF +VF++ G +P EY Sbjct: 491 ELLQQGSLRVYEIADRLGFENAFYFSKVFKKYEGCSPREY 530 >UniRef50_C6CT15 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT15_PAESJ Length = 520 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 62/102 (60%), Gaps = 1/102 (0%) Query: 179 GDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKA 238 G+ + ++ +Q +Y + L +++ + P++LS LF Q + +YV +RM KA Sbjct: 416 GNRVIETVKQLIQQDYDKDLELTELSEKVFLNPSYLSTLFKQETGLTITQYVLQLRMMKA 475 Query: 239 RMILQK-YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + +L+K L ++EV ++ G+PDS YF +VF++ G+TP EY Sbjct: 476 KELLKKRLDLKVYEVGEQVGYPDSIYFNKVFKKMVGITPKEY 517 >UniRef50_B1C0X8 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C0X8_9FIRM Length = 293 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 5/122 (4%) Query: 163 LCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHG 222 L +++ N+ S + L N++ NY + +T +VA + +TP ++S L + + Sbjct: 177 LIKTIKNIDTKTS----NVLVKKALNYISINYNKAITLNNVAAYLEVTPGYISNLLSSYT 232 Query: 223 TMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + F + V R+ KA+ +L++ + I E+A GF +YF +VF++ GLTP EY A+ Sbjct: 233 SKNFTDLVTECRIEKAKELLKE-NYQIKEIASSLGFGSHNYFSKVFKKVTGLTPKEYKAK 291 Query: 283 FQ 284 F Sbjct: 292 FD 293 >UniRef50_A4XMG0 Two component transcriptional regulator, AraC family n=2 Tax=Thermoanaerobacterales RepID=A4XMG0_CALS8 Length = 529 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 63/100 (63%) Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 + + + ++++ NY + +T ESVA+ +TP +LS LF + + F++Y+ +R+ KA+ Sbjct: 425 NLIVKAAISFIEKNYNKNITLESVAKEVYVTPAYLSILFKRELKINFVDYLHKIRIQKAQ 484 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +L+ +L ++VA GF D YF +VF++ GLTP ++ Sbjct: 485 ELLKNQNLKTYQVANMVGFSDEKYFSQVFKKYTGLTPSQF 524 >UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJ70_MOOTA Length = 440 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 80/145 (55%), Gaps = 5/145 (3%) Query: 140 LTHLS----RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 + HLS R E + ++ VL LL + + + + + G+ + + ++Q NY+ Sbjct: 287 VIHLSDLKLREIDEADTVEKAVLWLLAVGNAFIELIAERNSSEGEGIIDRVVEYIQKNYS 346 Query: 196 -QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 + L+ + +A+ ++P +L +LF + E++ VR+ +A+++L++ +I VA Sbjct: 347 SESLSVKEIARASYLSPAYLGQLFKKKMGYSLTEHINKVRIEQAKLLLRQTEQTIESVAI 406 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEY 279 + GF + YFC+VF++ GL+P EY Sbjct: 407 QTGFKERSYFCKVFKKITGLSPNEY 431 >UniRef50_B8I3I7 Two component transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=B8I3I7_CLOCE Length = 544 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 3/132 (2%) Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 ++ +LS + +N N R + L + ++V NY++ +T S+++ F I+ Sbjct: 414 LEEWLLSFFYKVNEYINRKRSN---RNEKLLSKVKDYVDRNYSENITLTSISKDFGISSG 470 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 +LS LF + FI+Y+ +R+ A+ +L+ L I+E+A R G+ D+ YF F++ Sbjct: 471 YLSVLFNDYIGQNFIDYLTNLRIQNAKNLLKSTDLKIYEIADRVGYRDAYYFSTAFKKSV 530 Query: 273 GLTPGEYSARFQ 284 G+ P +Y + Sbjct: 531 GINPTDYREKLN 542 >UniRef50_Q5WIQ6 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIQ6_BACSK Length = 322 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 12/160 (7%) Query: 124 QLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLY 183 QL L +G G THL S I+ L++ L + P + + D + Sbjct: 165 QLTDLAQGGGR------THLGAS----YIMTSLLIELSEQLIASYASPLAKTSLQRDLSH 214 Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 I W++ QPLT + V+ FN P++L++ F QH M +Y+ V+M KA+ IL Sbjct: 215 --IMEWIRVYANQPLTVKRVSDQFNYNPDYLTRQFKQHIGMSLQKYITLVKMTKAKDILS 272 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 + +I EVA G D YF R+F++ G+TP + F Sbjct: 273 RTRRTIKEVAADVGIQDEKYFMRLFKKTEGMTPTAFRKAF 312 >UniRef50_Q2BFH4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFH4_9BACI Length = 515 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 3/113 (2%) Query: 167 VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRF 226 V N+ +++ D+L +++ Y + + VA NITPN+ S LF Q F Sbjct: 400 VFNLKAADNK---DWLIERALEYIRTYYKSEIKAQEVADVVNITPNYFSSLFKQKTGKSF 456 Query: 227 IEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 EYV +R+ +A+ +L++ I+E+A++ GF + YF VFR+ G+TP +Y Sbjct: 457 NEYVNHMRVEEAKTLLEETPFKINEIAEQAGFHEYKYFVEVFRKFSGMTPTQY 509 >UniRef50_UPI0001C352BF transcriptional regulator, AraC family protein n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C352BF Length = 296 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 2/139 (1%) Query: 146 SPLEQNIIQPLVLSLLHLCRSVV-NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 S LE N + L+L + S++ N SQ +Y+SI +++ +N + L +++A Sbjct: 151 SFLEVNYLTTLILCEISNQISILKNDEEAQSQSNAG-IYNSIIDFIDENLDKELKLKNIA 209 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 FN ++++LF G++ +Y+ R+++A L + LSI E+AQ+ G+ DS F Sbjct: 210 NKFNYNEQYIARLFKSLGSVSLHQYILNQRISQANYYLSETSLSIKEIAQKLGYHDSHNF 269 Query: 265 CRVFRRQFGLTPGEYSARF 283 ++++R+ GLTP EY F Sbjct: 270 MKIYKRETGLTPSEYRNSF 288 >UniRef50_A3DK80 Two component transcriptional regulator, AraC family n=3 Tax=Clostridium thermocellum RepID=A3DK80_CLOTH Length = 544 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 66/126 (52%) Query: 160 LLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFA 219 L ++N+ + + L C +V ++ Q +T ++A + NI+ N+ LF Sbjct: 418 FLSFVTELLNVVKEYKPAQNNTLIKKACEYVLNHIDQEITLMTIADYLNISKNYFCSLFK 477 Query: 220 QHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 Q F+EYV V+M A+ +L++ + +EV++ G+ ++ YF R+FR+ L+P EY Sbjct: 478 QETGYNFLEYVTKVKMEWAKKLLREGNYKTYEVSEMLGYREASYFSRLFRKYTKLSPAEY 537 Query: 280 SARFQG 285 F+ Sbjct: 538 KKNFEN 543 >UniRef50_C6LGW7 DNA-binding response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LGW7_9FIRM Length = 504 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 77/145 (53%), Gaps = 4/145 (2%) Query: 139 ALTHLSRSPLEQNIIQPLVLSLLHLC-RSVVNMPPGNSQPRGDFLYHSI---CNWVQDNY 194 A + S +E+ L + L C R + + + D ++I N+++++Y Sbjct: 356 AYRRMQESEIEKTAATALTIKTLEDCFRREIEIILSEKDKKEDIRNYTIRRAINFIREHY 415 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 + ++ E +A+ ITP +LS LF + + F +++ R++ A+ +L+ I+E+++ Sbjct: 416 RENISLELLAEHLEITPEYLSTLFNKEVGINFTTFLKRFRISHAKRLLKGSSKKIYEISE 475 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEY 279 G+ D YF RVF+ + G++PG+Y Sbjct: 476 EVGYHDPKYFNRVFKEEVGVSPGDY 500 >UniRef50_Q1QCG2 Transcriptional regulator, AraC family with amidase-like domain n=2 Tax=Psychrobacter RepID=Q1QCG2_PSYCK Length = 348 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 62/108 (57%) Query: 176 QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRM 235 +P D L + ++++N+ Q + +A NITP L++ F MR IEY++ VR+ Sbjct: 236 KPHSDQLVKQVQEFIEENFKQSIQVSGLAAMVNITPRTLNRRFQSCVAMRPIEYIQAVRI 295 Query: 236 AKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +A+ +L+ ++I +A+R G+ D F R+F+R LTP EY +F Sbjct: 296 EQAKRLLELGDVTIKSLAERVGYDDISSFTRLFKRATELTPKEYQDKF 343 >UniRef50_UPI00019739A0 two component AraC family transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019739A0 Length = 143 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 60/115 (52%) Query: 168 VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFI 227 V G G ++ ++Q+NY LT VA+ ++ HLSKL ++ F Sbjct: 16 VTSGTGRKNSAGTYIVRKAVKYIQENYRNRLTLAVVAEQLFVSQWHLSKLINRYTGNSFS 75 Query: 228 EYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 E + VR+ +AR +L+ + ++A GF DS +FC VF+RQ G++ GEY R Sbjct: 76 ELLNQVRIEEARKLLKDPKRRVGDIAVEVGFSDSAHFCHVFKRQIGISAGEYRNR 130 >UniRef50_C0D4G3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4G3_9CLOT Length = 456 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 62/105 (59%) Query: 175 SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 S DF Y I ++ +YA+ L+ +A + ++PN+ S LF + FI Y+ +R Sbjct: 348 SASSKDFQYEEITAYIDRHYAEDLSLTGLAGMYGLSPNYFSTLFKKKAGCNFIHYLTSLR 407 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +A+++ +L + +L+I E+A+R G+ + +F R F++ +TP EY Sbjct: 408 IAESKRLLLETNLTIREIAERVGYYSASFFIRSFKKAEEITPSEY 452 >UniRef50_A8MJM2 Two component transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJM2_ALKOO Length = 371 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 60/99 (60%) Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 L IC++V +N Q ++ ++++ +T N++ LF Q M EY+ V+M +A+ + Sbjct: 263 LIAEICSYVLENVEQSISISTISEVLFLTKNYIGDLFKQETGMTIGEYITMVKMERAKQL 322 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + + L +EVA R G+ D++YF ++F++ GL+P E+ Sbjct: 323 IAEGTLRNYEVADRLGYKDAEYFGKLFKKNVGLSPMEFK 361 >UniRef50_B6QXA8 Putative uncharacterized protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QXA8_9RHOB Length = 318 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 12/178 (6%) Query: 118 HPARQIQLPSLQRGEGE----AMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPG 173 +P ++Q ++ + +G+ A +TA L+ + E+++ + L + + P G Sbjct: 136 YPKIKVQPDAIYKKDGKLYSSAGMTAGIDLALALTEEDLGRETALKVAQYSVMFLKRPGG 195 Query: 174 NSQPRGDFLYH--------SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMR 225 SQ Y ++ W+ N Q L+ + +A+F N+ P ++ F QH Sbjct: 196 QSQFSSVLSYQKSDDARMIALQEWILANLQQNLSVDRMAEFLNMAPRTFARFFKQHVGTS 255 Query: 226 FIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +YV +R+ AR ++ SI+EV +RCGF + + R F R G++P +Y RF Sbjct: 256 PAKYVEEMRLNTARQYIENPQTSINEVVRRCGFENGEKMRRSFIRNLGISPQDYRNRF 313 >UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9G4_9BACT Length = 261 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 20/253 (7%) Query: 30 VWFASQ-PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN 88 V+FA + + P + + +V+ GE N+L K+Q G ++ +PA ++ +N Sbjct: 7 VYFADRYDSEKPTSVHSHNGTEIILVVHGECVNVLPGKEQHAKAGSVIVVPAGMSHRQLN 66 Query: 89 NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEG--EAMLTALTHLSRS 146 + V + ++F +++ AR + + + G E +++ T +R Sbjct: 67 SGRVTTVYVIF----------EAQQECFDCSARILDVKGDRYAPGWFEQIVSLKT--ARL 114 Query: 147 PLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQF 206 E + + ++LS L + + G S + ++++NY + ++ VA Sbjct: 115 DREADRLLGVLLSYLTGRENRLQREGGRSPAAARAMA-----YLEENYNRNISVAEVANA 169 Query: 207 FNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCR 266 ++P+HL LF + + + + +RM +AR +L +LSI E+ +CGF YFCR Sbjct: 170 CGVSPSHLHLLFRREFSESPLASLNRIRMNRARQLLLNCYLSIGEIGFQCGFNQPHYFCR 229 Query: 267 VFRRQFGLTPGEY 279 FR+ G TPGEY Sbjct: 230 AFRKIHGCTPGEY 242 >UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQC9_CLOCL Length = 275 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 59/95 (62%), Gaps = 1/95 (1%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR-MILQK 244 + +++ DNY + +T + +++ N+TP +L +F + +R EY+ +R+ ++ MIL K Sbjct: 175 VLDYIDDNYDKIITLQDLSEVANVTPEYLCTVFKKTTGIRVFEYINNIRIKNSKEMILSK 234 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 ++ I E+A+ GF D YFC +F++ LTP E+ Sbjct: 235 KNMPIKEIAKNSGFEDVSYFCSMFKKIEKLTPNEF 269 >UniRef50_C6CXU8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU8_PAESJ Length = 529 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 61/93 (65%), Gaps = 1/93 (1%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL-QKYH 246 +++ D+YA L+ E VA + + P++ SKLF + + F++Y+ VR++KA+ +L + Sbjct: 427 SYITDHYADDLSLEVVADYVQLNPHYFSKLFHERCGITFVDYLTQVRISKAKELLAADFE 486 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 S+ E++ R G+ D +YF RVF++ GL+P E+ Sbjct: 487 QSLKEISMRVGYRDPNYFSRVFKKLTGLSPSEF 519 >UniRef50_C6IY76 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY76_9BACL Length = 501 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL- 242 ++ W+ ++Y QP +A +TP++LSK F M +Y+ VR+ KA+ +L Sbjct: 400 ETVKRWIAEHYDQPAELSHLASLVYLTPSYLSKRFKSETGMTITDYLIEVRIKKAKQLLR 459 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 Q L +HEV G+PD YF ++F+R G+TP EY Sbjct: 460 QANDLKVHEVGSVVGYPDPAYFNKLFKRIVGVTPNEYK 497 >UniRef50_A0PY49 Two-component response regulator n=2 Tax=Clostridium RepID=A0PY49_CLONN Length = 351 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 55/94 (58%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I ++++NY + +T E A N+ + SKLF + ++F++YV +M KA+ IL+ Sbjct: 253 IFKYIEENYKEKITLEEAASICNLNMYYFSKLFKKDTNIKFVDYVTLYKMEKAKEILKYT 312 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 SI +A G+ +S YF +VF+R G+TP Y Sbjct: 313 DESIVNIAIHLGYDESGYFSKVFKRVVGITPSIY 346 >UniRef50_UPI0001788F54 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F54 Length = 523 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 57/94 (60%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + ++QD+YA P+T VA+ F+ ++LS FA + F EY+ +R+ KA +L Sbjct: 419 LLEYIQDHYADPITLTGVARQFHFNASYLSSYFASYNGEGFSEYLNKIRLEKAMELLLTT 478 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L+I E++ G+ D YF +VF++Q G++P ++ Sbjct: 479 ELTISEISASVGYSDQSYFTKVFKKQTGISPSQF 512 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 126/254 (49%), Gaps = 27/254 (10%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGL 106 DF L IV+ G ++++ ++ + +G++ I + + N K + ++++ L L Sbjct: 35 DFSELVIVMNGTATHIVDNEKFNIKKGDVFVINSNTCHGYENAKDFRICNIMYRSENLLL 94 Query: 107 SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLL--HLC 164 + YD + + H I+ P + ++L+ PL+ I L+ SLL ++ Sbjct: 95 ADYDIKKNAGFHALFVIE-PYFTKEHSFK-----SNLTLKPLDFEKIHILLDSLLSEYMT 148 Query: 165 RS--------------VVNMPP----GNSQPRGDFL-YHSICNWVQDNYAQPLTRESVAQ 205 ++ VV + GNS + D + ++++++Y + ++ + +A+ Sbjct: 149 KTDGWKTSTKALFMLLVVTLARLYDFGNSSEKVDVINIAKSISYIENHYTEDISIDLLAK 208 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 + +P H +++F++ + + Y+ +R+ +A +L++ L I +A +CGF DS+YF Sbjct: 209 ISHYSPRHFARIFSETYSTTPLNYIISLRIRRACSLLKETTLPISTIAIQCGFSDSNYFS 268 Query: 266 RVFRRQFGLTPGEY 279 R+F++ LTP +Y Sbjct: 269 RIFKKNLYLTPKQY 282 >UniRef50_C6IYA1 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYA1_9BACL Length = 509 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%) Query: 154 QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 Q LV SL++L V +++ + + H + N++ +YA L+ +++ ++I P + Sbjct: 383 QELVQSLVNLAEETVGSLLQDAK---NPVVHQVLNYIDSHYADELSLKTLGAQYHIHPVY 439 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 L +LF + M F EY+ R+ KA+ L+ +L +HE+A+ G+ + YF + FR+ G Sbjct: 440 LGQLFHKETGMSFAEYINKYRIEKAKQQLKNTNLKVHEIARSVGYWEIGYFYKQFRKYVG 499 Query: 274 LTPGEYSA 281 ++P ++ A Sbjct: 500 ISPTDFKA 507 >UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETL2_9FIRM Length = 517 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 58/92 (63%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 N+++++Y + ++ E VA ITP +LS LF + F ++R R++ A+ +L+ + Sbjct: 423 NYIREHYKEGISLEEVAGRLGITPEYLSTLFNREMGENFSTFLRKFRISHAKRLLKGTDM 482 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 ++E+A+ G+ D YF RVF+ + G++PG+Y Sbjct: 483 KVYEIAEEVGYTDPKYFARVFKEELGISPGDY 514 >UniRef50_C0A6S4 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6S4_9BACT Length = 318 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 8/149 (5%) Query: 131 GEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWV 190 G G A + RS + N++ VL L ++ +M G S+ + + C +V Sbjct: 163 GTGTAFPGKMDVRHRSSM--NLLLDAVLETL--AEALPDMEGGRSR----LSWQAACAFV 214 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 Q++ P R VA F + PNH+S+LF Q F +YV RM +AR +L +I Sbjct: 215 QEHLHLPFGRGDVADFLKLHPNHISRLFTQFSECSFAQYVMRQRMDRARAMLADPRWNIT 274 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 EV+ +CGF YF RV + GL P E+ Sbjct: 275 EVSLQCGFTSLSYFSRVCHAELGLPPSEF 303 >UniRef50_UPI000178A1A9 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A1A9 Length = 309 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 156 LVLSLLHLCRSVVNMPPGNSQP--RGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 L++S L + + P ++ G ++H +++DN +PL+ E VA +IT H Sbjct: 170 LIVSFLTVHGPGFHHEPSGAEANDEGTSMFHQAELFIKDNLNEPLSLERVAGHLHITTRH 229 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 L++LF ++G F+ YV+ R+ +A+ +L I E+A CGF YF RVF + G Sbjct: 230 LTRLFRKYGHQSFVHYVQEQRVQQAKHMLLHTDRQIKEIAVCCGFESVHYFTRVFTSKLG 289 Query: 274 LTPGEY 279 +TP + Sbjct: 290 VTPARF 295 >UniRef50_UPI0001C36B1C two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B1C Length = 505 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 1/104 (0%) Query: 176 QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRM 235 + R D + +C ++ NY QPL E++A+ F ++L KLF Q F Y+ VR+ Sbjct: 390 EVRSDNIIEKLCGYIGKNYRQPLKIETLAEVFGYNGSYLGKLFKQETGESFHSYLDRVRI 449 Query: 236 AKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 KA+ +L+ I+ VA CGF ++YF F++ G++P Y Sbjct: 450 EKAKKLLET-DARIYSVASECGFQSNEYFSNKFKKYVGVSPQAY 492 >UniRef50_UPI0001787E1A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787E1A Length = 769 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 75/142 (52%), Gaps = 3/142 (2%) Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP-L 198 L ++R LE+ + + LL + R V + + L ++ + +YA P L Sbjct: 619 LQAINRRILEKETLDEIECVLLDVVREVFEQRRSGREDKNRLLADTVKEMIDKHYADPDL 678 Query: 199 TRESVAQFFNITPNHLSKLF-AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 + +A ++ +L ++F AQ GT ++ + R+A+A+ L++ L++ E+ ++ G Sbjct: 679 NVQKIADMLKMSSVYLGQVFKAQEGTT-VVDQINATRLARAQQYLEQQQLTVAEIMEKVG 737 Query: 258 FPDSDYFCRVFRRQFGLTPGEY 279 F + YF R+F+R++G TP EY Sbjct: 738 FGNESYFYRLFKRRYGTTPKEY 759 >UniRef50_C0D0A3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D0A3_9CLOT Length = 487 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 59/98 (60%) Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 L + ++Q +Y + L+ + +A F ITP +LSK F ++V +RM +AR + Sbjct: 387 LAFQVAAYLQQHYDEDLSLKDLANLFFITPTYLSKWFKDKTGATITQFVENLRMERAREL 446 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L+ LS+ E+ +R G+ DS+YF RVF++ +G+ P ++ Sbjct: 447 LEYTSLSVGEIGRRVGYEDSNYFSRVFKKIYGIPPSKW 484 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 98/229 (42%), Gaps = 37/229 (16%) Query: 73 GEMLFIPARAANLPVNNKPVMLLSLVFAPTW----LGLSFYDSRTTSLL----------- 117 G+M IP P+ + ++ P+W G+ F TS L Sbjct: 65 GDMTIIP-----------PLEVHKALYEPSWEAERFGIYFSRDTVTSFLSLCGREAFGHI 113 Query: 118 --HPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLH-----LCRSVVNM 170 P R I PS R + E +L + + + Q + SLLH L R Sbjct: 114 FSQPKRTI--PSEFRPKIEELLAQMQDEEKQG--DSYCQIQLCSLLHQILVVLGRCQEAR 169 Query: 171 PPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYV 230 G++ + ++ +Y + +T VA F N++P + SK F + F EY+ Sbjct: 170 REGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPTYFSKKFKSSTGLCFKEYL 229 Query: 231 RWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 ++R+ KA +L+ LS+ VA CGF D +YF VFRR G++P EY Sbjct: 230 NYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGVSPREY 278 >UniRef50_UPI0001788A43 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A43 Length = 516 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 67/130 (51%) Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 ++ LVL H R P + + +++ + +P++ + VA ++ N Sbjct: 384 VKKLVLQGFHALREEAMRHPVPESTLHERIVLQAVRYIKARFTEPISLQEVADEVAVSRN 443 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 + S+LF + FI+YV +R+ +A+ +L L ++EVA R GF D YF ++F++ Sbjct: 444 YFSELFKRVTGHNFIDYVIDLRLKRAKELLSTTSLRVYEVADRSGFNDVKYFSKLFKKMV 503 Query: 273 GLTPGEYSAR 282 G+TP EY + Sbjct: 504 GMTPAEYQGQ 513 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 60/113 (53%) Query: 172 PGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVR 231 PG +Q + N ++D+ AQP E+ Q + + L F Q M +Y+R Sbjct: 167 PGETQLADAHQLDLLMNALRDSIAQPFRLEAFCQQYGFSLRSLRSRFKQQTGMSVSQYLR 226 Query: 232 WVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +R+ +A +L+ +I EVA +CGF DS+YF VF + FG+TP Y RFQ Sbjct: 227 QLRLCRAMELLRYDRQTISEVAAQCGFDDSNYFSVVFHQAFGVTPSSYRQRFQ 279 >UniRef50_UPI00017895F4 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017895F4 Length = 754 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 61/96 (63%), Gaps = 1/96 (1%) Query: 185 SICNWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 +IC+ ++ +YA P L+ E + + ++SKLF ++ RF++++ +RM +A+ +L Sbjct: 640 NICDLIERDYANPDLSLEMLGDRHQLNAKYVSKLFKENTGQRFVDFLIDIRMKEAKRLLT 699 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + S+ E+A+R G+ + F RVF+R G+TPGEY Sbjct: 700 ETDYSVQEIAERVGYAHAISFTRVFKRTAGVTPGEY 735 >UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D00 Length = 291 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 27/254 (10%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA--ANLPVNNKPVMLLSLVFAPTW- 103 D L V +G+ +E K EG++ IP ++ P ++P++ +L FAP+ Sbjct: 36 DLYELVYVYQGKGTFFIENKLMEKKEGDLFIIPGNTIHSSFPDPDQPIVSSALFFAPSLV 95 Query: 104 ------------LGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH---LSRSPL 148 L Y +T S H QLP + E ML ++ L++ Sbjct: 96 LGANGSDLQYSVLSCFEYAQKTGSYRH-----QLPESNQAYIEDMLKGISEEIRLAQLGF 150 Query: 149 EQNIIQPLVLSLLHLCRSVVNMPP---GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQ 205 + ++ L LLH+ R + + +SQ +L SI W+ ++ QP+ +++ Sbjct: 151 REALVLQLRSLLLHINRYISTLSAEQTAHSQIGPAWLMDSI-QWIHEHLDQPIGLAALSA 209 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 + P H S++F ++ + Y+ R+A+A+ +L+ + S+ ++A+ CG+ +F Sbjct: 210 QAAVDPAHFSRMFKKYTGLHVTGYMHAKRIARAKELLRNHEASVGQIAEICGYATLTHFH 269 Query: 266 RVFRRQFGLTPGEY 279 R F++ G+TPG Y Sbjct: 270 RNFKKLTGMTPGAY 283 >UniRef50_A8LZR9 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=A8LZR9_SALAI Length = 338 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 WV+ + PL +A+ +++P + S++F + M +YV R+ +AR +L+ L Sbjct: 223 EWVRAHVEHPLPVPELAERVHMSPRNFSRVFRREVGMTPGQYVVQTRVGRARELLESTDL 282 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 SI ++A+RCGF + F R F R GLTPG Y RFQ Sbjct: 283 SISQIARRCGFGRVETFLRTFDRAVGLTPGAYRQRFQ 319 >UniRef50_A9KQP4 Two component transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KQP4_CLOPH Length = 533 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 57/92 (61%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +++DNY + L+ E V++ +I+P + SK+F + FI+Y+ +RM+ A+ +L + S Sbjct: 437 YIRDNYQKDLSLEEVSRQVDISPYYFSKVFKEETGTNFIDYLTELRMSVAKQLLLESERS 496 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + E+ G+ D +YF R F++ G+TP EY Sbjct: 497 MKEIGIMVGYSDPNYFSRSFKKNIGITPTEYK 528 >UniRef50_UPI0001787D2D two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787D2D Length = 535 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 1/99 (1%) Query: 185 SICN-WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 ++C ++ ++Y + L+ E VA+ F +P + S F H +M F EY+ +RM KA +L+ Sbjct: 434 AMCKAYLAEHYMEDLSLELVAKRFFFSPAYFSSFFRSHTSMTFTEYLLKLRMDKAMQMLE 493 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + I E+A GF D+ YF R+F+R+ GL+P E+ + Sbjct: 494 GGNRKISEIALSVGFRDAGYFTRIFKRETGLSPEEFRKK 532 >UniRef50_C6J2X2 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2X2_9BACL Length = 751 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Query: 170 MPPGNSQPRGDFLYHSICNWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIE 228 M + + L H I + D Y+ + +S+A F+ + ++LS+ F +H +E Sbjct: 628 MLEKEKKLEDNVLLHQIIELLHDKYSDSQFSIQSMANHFSQSSSYLSRYFKEHTGRTVLE 687 Query: 229 YVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 Y+ +R+ +A+ +L + L++ E+ QR G+ D F R F+ +F LTPGEY R Q Sbjct: 688 YLNGIRIDEAKRLLIETKLTVTEIVQRIGYSDPSSFIRKFKSEFQLTPGEYRKRMQ 743 >UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicutes RepID=B3EYL7_BACST Length = 404 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 1/93 (1%) Query: 188 NWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 ++Q +++Q LT ESVA+F N++P +LS++ Q + FI + +RM KA +L Sbjct: 301 QYIQKHFSQSDLTLESVAEFLNVSPVYLSRMIKQELGISFIHLLTKIRMEKAAELLLSTE 360 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L IHE+A+R G+ YF F++ G++P +Y Sbjct: 361 LPIHEIAERVGYDTQHYFSTAFKKAMGVSPNQY 393 >UniRef50_A4XFU2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFU2_CALS8 Length = 508 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 9/169 (5%) Query: 116 LLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNS 175 +L A++I P L+ ++M +L + +E+++I+ +H C ++ Sbjct: 348 ILTKAKEI-CPVLKDEFAKSMAFSLNMQESNNIEKSLIE-----FVHYC---IDKIQNVK 398 Query: 176 QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRM 235 + R + +++ NYA + +A+ ++PN+ K+F + F++++ +R+ Sbjct: 399 ESRHKKIIKDAITYIERNYANQIFLSDIAEVCGVSPNYFCKIFKEETGKSFVDFLNELRI 458 Query: 236 AKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 KA+ +L +L +EVA++ GF D YF +F++ G +P ++ Q Sbjct: 459 NKAKELLLSTNLKSYEVAEKVGFNDYKYFSMIFKKYTGTSPSKFKEERQ 507 >UniRef50_C5EHK1 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHK1_9FIRM Length = 510 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 4/100 (4%) Query: 184 HSICNWV----QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 H I N V Y L + +AQ N+TP +LS LF + +++ Y +R+ A+ Sbjct: 400 HPIINQVLKIMDREYKSDLPLDEMAQRMNVTPEYLSTLFMKELGIKYTTYRAQIRIDVAK 459 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +L + L I+EVA+ GFPD YF +VF++ G++PGEY Sbjct: 460 RLLSEGKLKIYEVAEASGFPDVKYFTKVFKKYTGVSPGEY 499 >UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Thermoanaerobacterales RepID=B0K339_THEPX Length = 365 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%) Query: 174 NSQPRGDFLYHSICNWVQDNYAQ-PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRW 232 NS+ R L +Q+NY+ ++ S+A+ ITPN+LS LF + F +Y+ Sbjct: 256 NSKNRK--LIDEAIKLIQENYSDLNISLNSIAEKLYITPNYLSTLFKSEMGVTFSDYLTA 313 Query: 233 VRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 R+ KA+ +L+ + I+EVA+ G+ D YF +VF+ G TP EY + Sbjct: 314 CRIEKAKELLKDVKVKIYEVAEAVGYTDQHYFSKVFKNITGFTPKEYREKI 364 >UniRef50_A4XJ73 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJ73_CALS8 Length = 517 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 2/145 (1%) Query: 142 HLSRSPLEQNIIQPLVLSLLHLCR-SVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTR 200 +LS+ L+ IQP + L L + V++ ++ D L I ++++ NY + Sbjct: 374 YLSQEILKSFYIQPTLTELKGLIKFYFVSLADEINKLSPDSLKQKIADFIERNYFADIKL 433 Query: 201 ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPD 260 +++A F ++ SKLF + F Y+ +R+ KA++ L K + E ++ GF D Sbjct: 434 DTIANAFGYNSSYFSKLFKKIFGENFTVYLDRIRVEKAKVFL-KEGCKVSETCKKVGFED 492 Query: 261 SDYFCRVFRRQFGLTPGEYSARFQG 285 DYFC F++ GL+P EY + + Sbjct: 493 VDYFCAKFKKYVGLSPKEYKEKLKN 517 >UniRef50_C6J5N6 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5N6_9BACL Length = 540 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 74/141 (52%) Query: 145 RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 R+ ++ Q ++ L+ + Q + + ++ ++V+ N L+ VA Sbjct: 395 RAIYKKQTTQGVIDWLVQFRDGCCEILSSRKQSYKEQIVRNVQDYVKRNLNSKLSLNQVA 454 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 FN +PN+LS LF++ + F+EYV ++A A+ ++ + I+E++Q+ G+ + YF Sbjct: 455 DVFNFSPNYLSHLFSKTAKINFVEYVTETKIAAAKEMMVRGEGRIYEISQKLGYESAFYF 514 Query: 265 CRVFRRQFGLTPGEYSARFQG 285 +VF++ G++P E+ R Sbjct: 515 SKVFKKVEGISPREFMQRLNS 535 >UniRef50_C2KZS5 Response regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KZS5_9FIRM Length = 249 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 59/102 (57%) Query: 179 GDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKA 238 G++L N+++ +YA+ + +S+A +I+PN+LS LF H F +Y+ R+ KA Sbjct: 141 GNYLVREAMNYIEVHYAEKIGLKSIADVLHISPNYLSDLFRLHLKDNFSDYLLAFRLKKA 200 Query: 239 RMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + L+ + +V+Q GF D+ YF VF++ + TP EY Sbjct: 201 CLFLELPQYKVADVSQMVGFKDATYFSTVFKKAYNATPLEYK 242 >UniRef50_C9A6S2 Response regulator receiver n=5 Tax=Bacteria RepID=C9A6S2_ENTCA Length = 507 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 60/100 (60%) Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 D L +I ++QDNY + L+ +A+ F+ + +LS + M F EYV+ R+ KA+ Sbjct: 402 DDLLVAIQRFIQDNYTKSLSLSELAETFHFSYTYLSAFLSAKLKMSFSEYVKKTRLDKAK 461 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +L + L++ E+++ G+ D YF R+F+++ +TP +Y Sbjct: 462 ELLTQSDLNLSEISEAVGYSDISYFSRIFKKECQVTPSKY 501 >UniRef50_C5RJF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJF8_CLOCL Length = 305 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 55/101 (54%) Query: 179 GDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKA 238 D + I N++ NY + + E +A+ FN +L K+F H F Y+ +R+ A Sbjct: 196 SDNIMKRIVNYIDRNYYKDIKLEMLAEIFNYNSAYLGKMFKNHTNESFNSYLDKIRIENA 255 Query: 239 RMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + +L L +++V+++ G+ + DYF F+R G++P EY Sbjct: 256 KKLLTNDSLKVYQVSEKVGYKNIDYFYSKFKRYVGMSPKEY 296 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 26/251 (10%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIP-------ARAANLPVNNKPVMLLSLVF 99 D L + GE L+ R+V G ++ IP + +N V + L + Sbjct: 29 DCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQRTALRFSIK 88 Query: 100 APTWL----GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLE------ 149 WL G F T+ + I++P ++ E ++T + + ++ P E Sbjct: 89 DTDWLCSALGKDFVKDNLTAGI-----IEVPDKRKEYIENLITRMIYENQMPDELSMGMV 143 Query: 150 QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 + + Q ++ +L C+ + + + + +V +NY + + + VA+ F+I Sbjct: 144 KTLFQEFMIFVLR-CKLYGDTSAHEIDAQNSTI-QDVATYVYNNYDKQIYLDDVAKQFSI 201 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKA-RMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 + ++LSK F Q F EY+ VR+ +A R++L+ H SI ++A CGF DS+YF F Sbjct: 202 SRSYLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNH-SITDIAFACGFNDSNYFGDAF 260 Query: 269 RRQFGLTPGEY 279 RR G++P +Y Sbjct: 261 RRIKGISPNKY 271 >UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLM9_9FIRM Length = 516 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 58/98 (59%) Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 + I ++Q++YA+ + ++A ++P +LS LF + + Y+ +VRM A+ Sbjct: 405 IVQEIKRYIQEHYAENINLNALADQVYLSPKYLSDLFKRETGENYTSYLLYVRMEHAKKY 464 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L ++ L I+EVA+ G+ F RVF+++ G+TPGEY Sbjct: 465 LMQFDLKIYEVAELTGYASPKQFIRVFKKEVGVTPGEY 502 >UniRef50_C5EHL9 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHL9_9FIRM Length = 254 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 58/104 (55%) Query: 179 GDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKA 238 G+ L +V+ +Y +T + +++ +++PN+L +LF +H +EYV RM KA Sbjct: 150 GNLLVQKAIQYVEVHYGGRITLKDMSEELHLSPNYLCELFKRHTGKNLMEYVTEYRMMKA 209 Query: 239 RMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 R L + +VA+ G+ ++ YF F++ +G+TP EY + Sbjct: 210 RNYLNHVEYKVSDVAEMVGYKEAKYFSSTFKKMYGMTPLEYRNK 253 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 19/250 (7%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN-LPVNNKPVMLLSLVFAPTWLG 105 +F + V G ++ +Q L G++LF+ + + + V++ ++ +++ P +L Sbjct: 70 EFFEIIYVYAGSCTTTVDGEQMVLKAGDLLFLNIQTGHVISVDSWDDIVFNILIKPDFLE 129 Query: 106 LS----------FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA----LTHLSRSPLEQN 151 S F + SL + + Q E TA + +L + P Sbjct: 130 QSLFHLLSENDVFLNFYLESLYNRTMSEKYLLFQENTDEIASTADRIVIEYLRQDPFAMK 189 Query: 152 IIQPLVLSLLHLC--RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 +I+ ++L+ L + P G + P G I W+ ++YA T +S A+ F+ Sbjct: 190 VIEAQFVTLVSLLARENRRQAPTGETIP-GKAFVPEILQWLSNHYAGA-TLKSTAEHFHY 247 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 T ++LS L ++ F+ ++ ++ +A L++ LS+ ++ + G+ D+ YFCRVF+ Sbjct: 248 TTSYLSFLIKEYTGKNFLRIIQDFKIREAERYLKETSLSVERISDQLGYKDAAYFCRVFK 307 Query: 270 RQFGLTPGEY 279 G TP EY Sbjct: 308 NTTGATPSEY 317 >UniRef50_C4L2Y3 Two component transcriptional regulator, AraC family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L2Y3_EXISA Length = 236 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 61/99 (61%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I +++ ++A+ L+ + +++ F ++ ++S+ F Q + EYV +RM +A+ +L+ Sbjct: 135 IGTYIEQHFAEELSLQGMSERFYLSREYISRRFKQQYGVNLSEYVLTIRMNEAKRLLETS 194 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 I+EVAQ GF D YF +VF++Q G+TP E+ + Q Sbjct: 195 RQRIYEVAQAVGFSDDKYFRKVFKKQVGVTPNEFREQVQ 233 >UniRef50_C6IXH5 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXH5_9BACL Length = 524 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 67/125 (53%) Query: 160 LLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFA 219 LL LCR + G + + + +V + + L +++A+ F++ P +L ++F Sbjct: 386 LLKLCREASLLLAGLRRKNENNTIFQVIQYVDEEFRSKLKLQTLAKQFHMNPTYLGQVFK 445 Query: 220 QHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + F +Y+ R+ +A+ +L++ + I ++A + G+P++DYF F++ G+ P Y Sbjct: 446 KETGKTFNDYLNEKRLEEAKRLLKRTSMKISDIALQVGYPNTDYFISKFKQSIGMLPSVY 505 Query: 280 SARFQ 284 + FQ Sbjct: 506 KSEFQ 510 >UniRef50_C4G516 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G516_ABIDE Length = 371 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 55/94 (58%) Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 + ++QDNY + +T E A F++T +LSK F H F EYV +RM +A ++ + Sbjct: 265 KVSKYLQDNYTRGVTLEQTADIFHVTKEYLSKAFKLHCGEGFTEYVTALRMKRAHELITE 324 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGE 278 + + + EVA G+ D +F + F++ FG TPG+ Sbjct: 325 HQVPLKEVAYMVGYLDLAHFYKTFKKFFGKTPGD 358 >UniRef50_A7VQP5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQP5_9CLOT Length = 536 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 1/93 (1%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY-H 246 +++ NYAQP++ VA+ +++PN+LS LF + + +YV VRM A+ I+++ Sbjct: 437 HYIHTNYAQPISLALVAEKIDVSPNYLSSLFHKELGESYSKYVTRVRMEHAKRIMKENPG 496 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L I+E+ + G+ +F VF++ FG+TPGEY Sbjct: 497 LRIYEIVNQVGYVSVKHFSYVFKQLFGVTPGEY 529 >UniRef50_C6D427 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D427_PAESJ Length = 530 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 2/128 (1%) Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 I+ L L +L + + QP+ + I ++ +Y + LTR S+A+ + P+ Sbjct: 402 IEDLEAYLKYLVHTAMEYRDFAEQPKS--VADDIKQYIHAHYGEDLTRISLAEIVYLHPD 459 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 +L++LF + + YV RM A+ +L+ +LS+ VA++ G+ + YF +VF+++ Sbjct: 460 YLARLFKKETGVSLGTYVISARMEAAKQLLRTTNLSVFAVAKKVGYANYSYFAKVFKQEA 519 Query: 273 GLTPGEYS 280 G+TP EY Sbjct: 520 GVTPNEYK 527 >UniRef50_C6CXB6 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXB6_PAESJ Length = 245 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 79/149 (53%), Gaps = 5/149 (3%) Query: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLH-LCRSVVNMPP--GNSQPRGDFLYHSICNWV 190 EA+ ++ P++++ + ++ ++H L + N P SQ D + + ++ Sbjct: 93 EAIAYGVSAYLLKPVKKDKLYQVLNKMIHELTKENTNRKPLLDGSQYGHDVGF--VTRYL 150 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 +++YA+ + A + + S LF + + FI Y++ +R+ +++ +L + L I+ Sbjct: 151 EEHYAEDIDLNKAASLVFMNSTYFSSLFKKMTGVSFIHYLQKIRVEESKKLLLNHQLKIY 210 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 EVA++ GF D YF RVF+ GLTP E+ Sbjct: 211 EVAEKVGFSDEKYFFRVFKNTTGLTPNEF 239 >UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6W3_9BACT Length = 256 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 58/93 (62%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++ ++ + L +A ++P++ + LF +H + EY++ +RM AR +L+ L+ Sbjct: 151 FITYHFHRELAIREIAASNGMSPSYFNALFHKHMQVSPAEYIKKLRMGHARQLLRNSRLT 210 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 I E+ ++CG+ ++ YFCR+FR+ G TPGEY A Sbjct: 211 ISEIGEQCGYRNAYYFCRIFRKVHGCTPGEYRA 243 >UniRef50_A6TMD1 Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TMD1_ALKMQ Length = 253 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 62/102 (60%), Gaps = 3/102 (2%) Query: 185 SICNWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 S+ +++ D++ L +AQ F+ + +++SK Q F+EY+ +R+ KA+ IL+ Sbjct: 149 SVKDYIDDHFDDSQLDLSHIAQLFDTSKSYISKRMKQELGKSFVEYLTDIRLEKAKKILE 208 Query: 244 KYH--LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +H ++++ V+ R G+ YF RVF++ +G++P EY +F Sbjct: 209 NHHARMTMYHVSTRVGYTSQHYFSRVFKKTYGISPMEYRNKF 250 >UniRef50_C6IZZ6 Transcriptional regulator n=2 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZZ6_9BACL Length = 776 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%) Query: 174 NSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 + R L + ++D +A ++ E+ A FN TP LS+LF Q + FI+YV + Sbjct: 666 DQTARAKPLIEQVTAMLKDQFAAGISLEACAHHFNTTPYTLSRLFKQVTGINFIDYVTAL 725 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 R+ KA+ +L+ + ++E+A++ G S YF R+F+R +TPG+Y + Sbjct: 726 RIEKAKELLRDSDMKVNEIAEQVGLQPS-YFIRLFKRFEQITPGQYREK 773 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 55/94 (58%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I +V DNY + +T +A F+++ ++S+ F +H + F +YV +R+ A+ +L Sbjct: 186 IITYVNDNYLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTT 245 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 ++SI +VA GFP+ YF R F+ +G TP Y Sbjct: 246 NISITDVALSSGFPNVSYFIRSFKESYGKTPFSY 279 >UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J0N4_9BACL Length = 533 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 3/159 (1%) Query: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 QI PSL G+A L +S + +Q + ++ + + + + Sbjct: 374 EQIHSPSLN---GQAEPVKRAALYQSVYDCQTLQEIEAAIWRAAAHYLELLMERATDKNA 430 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 L H +C + + Y +P+T +S++ ++PN+L +F M +Y+ +R+ KA+ Sbjct: 431 KLVHQVCQIIDNTYHEPITIQSLSSQVYLSPNYLRSIFRDKTGMTIHDYLTRIRLEKAKE 490 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +L L + ++AQ+ G+ + YF +F + G+TP EY Sbjct: 491 MLADPSLKVQDIAQKIGYESTSYFISLFVKNQGVTPNEY 529 >UniRef50_C5ERJ4 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERJ4_9FIRM Length = 538 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Query: 187 CNWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 C +++DNY P +T+ +A+ ++P++LS +F + + ++Y+ VRM AR +L + Sbjct: 434 CGYIRDNYRDPGMTQTQIAESLCVSPSYLSGIFKKTMGVTMVQYLTMVRMEGARELLLES 493 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 + ++A+ G+ D YF R F+RQ+GL+P Sbjct: 494 EYDVKDIAEMVGYHDEYYFSRCFKRQYGLSP 524 >UniRef50_C4G3Y7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G3Y7_ABIDE Length = 527 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 71/132 (53%), Gaps = 1/132 (0%) Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP-LTRESVAQFF 207 +++ I+ + + + R + N R + +++ ++++NY +P LT E +A Sbjct: 393 KKSYIEDVFEDIKEVYRKTIEFFNHNKYSRSRKIAYNVKKYIEENYTKPELTVEQIAAGL 452 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 + ++L + F + M+ +++ +RM KAR +L + + ++++ GF DS Y +V Sbjct: 453 YVDSSYLRRTFKKEFNMKITDFLTQIRMEKARELLVQDRYKLSDISEMVGFNDSSYLSKV 512 Query: 268 FRRQFGLTPGEY 279 F++ FG +P EY Sbjct: 513 FKKYFGKSPSEY 524 >UniRef50_C7GGB1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGB1_9FIRM Length = 551 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 162 HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA-QPLTRESVAQFFNITPNHLSKLFAQ 220 +L +V+ + + R D L +++DNY + ++ VA N++ +H S +F Q Sbjct: 419 NLFGAVIELREQGMERRYDNLIQHAKAYIEDNYNHEDISLNMVASEVNLSSSHFSTVFGQ 478 Query: 221 HGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + F+EY+ VRM KA+ +L+ E+A GF D+ YF +F++ G TP EY Sbjct: 479 ETGVTFVEYLTKVRMDKAKQLLRTTGTKTTEIAFEVGFRDAHYFSNLFKKTQGCTPREYR 538 Query: 281 AR 282 R Sbjct: 539 NR 540 >UniRef50_C6D127 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D127_PAESJ Length = 534 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 66/120 (55%), Gaps = 2/120 (1%) Query: 162 HLCRSVVN--MPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFA 219 H ++V+ M + D + ++++N + ++RE VA + P +LS+LF Sbjct: 407 HWAENIVSAVMDAAFTALESDSVVQKSVQYIKENVEEDISREDVAAHVGLNPAYLSRLFK 466 Query: 220 QHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + I+Y+ +MA+AR +L +++ +AQ+ G+ + +F ++F++Q+G+ P EY Sbjct: 467 KETGQNLIDYLIETKMARARQLLDTTGMTVSAIAQQVGYSNFSHFTKMFKKQYGINPQEY 526 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 10/262 (3%) Query: 27 LGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP 86 + R+ ++ S VG+ F + + GE + ++ + +G+++ +P+ + Sbjct: 11 IKRIKRSNTSCSTGVGAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRT 70 Query: 87 VNNKPVMLLSLVF-----APTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT 141 N M +V A W+ + + P + +P +R A+L L Sbjct: 71 TYNGKGMHERIVISFRNEATEWIQNQTGKELMENCMKPG-VVNIPEKRRDYVVALLDKLI 129 Query: 142 HLSRSPLEQN--IIQPLVLSLLHLCRSVVNMPPG--NSQPRGDFLYHSICNWVQDNYAQP 197 + SP E + I+ ++ LL N + + + ++ ++YA Sbjct: 130 FENDSPDELSPAFIKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADN 189 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 L+ E VA FN++ ++LSK F F EY+ VR+ A +L + + SI ++A CG Sbjct: 190 LSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECG 249 Query: 258 FPDSDYFCRVFRRQFGLTPGEY 279 F DS+YF FR+ G++P +Y Sbjct: 250 FNDSNYFGDAFRKAKGISPHKY 271 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 26/251 (10%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF---IPARAANLPVNNK----PVM 93 VG F LD+V+ G NL A + +VEG + + N P+ K P+ Sbjct: 51 VGDSVEKFDNLDLVMTG--PNLPHAWKGEIVEGNHVVTIQFSDKLLNFPILEKRLFSPIK 108 Query: 94 LLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNII 153 L L + G+SF S T L + +QL +Q T L LS I+ Sbjct: 109 QLLL---DSQKGISF--SENTMLAMKEKILQLTRMQ-----GFHTVLEFLS-------IL 151 Query: 154 QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 L + H+ S + + +C++++ N+ +P+ VA N++ + Sbjct: 152 YDLSTADRHILVSNLYDTKDTIRTSKSRRIAKVCDYIEKNFEEPIKLGDVAALVNMSESA 211 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 S F + FI+Y+ +R+A+A +L + ++ E+ CGF + F R+F+++ G Sbjct: 212 FSHFFRKKTNCTFIDYINNLRVARACQMLTETSHTVAEICYSCGFNNLSNFIRIFKKKKG 271 Query: 274 LTPGEYSARFQ 284 TP EY Q Sbjct: 272 NTPSEYRTILQ 282 >UniRef50_B8FUQ5 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUQ5_DESHD Length = 427 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 56/92 (60%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++ N+AQPLT AQ I+P+HLS+LF Q F +Y+ VR+ KA +L+K Sbjct: 331 SFILHNHAQPLTIADAAQHLFISPSHLSRLFRQQLDCTFNDYLTRVRVEKAVELLKKPEF 390 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 S+ +VA GF + +F +VFR+ G+TP Y Sbjct: 391 SVKDVALAVGFQNQSHFAKVFRKYIGVTPLVY 422 >UniRef50_B1YJP0 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=B1YJP0_EXIS2 Length = 234 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 82/142 (57%), Gaps = 4/142 (2%) Query: 141 THLSRSPLEQN---IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP 197 T++ R+ L Q+ +++P+ +L+ G Q +G+ + I ++ +YA+ Sbjct: 88 TYMRRAILHQSFDYLLKPIDPDILNDALGRAMELIGPVQEQGEAI-DQIAKYISTHYAEE 146 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 LT + +++ F ++ ++S+ F Q ++ +Y++ +R+ +A+ +L + I+E+A G Sbjct: 147 LTLQLMSERFYLSREYISRRFKQRFSVNLSDYIQTIRLNRAKELLGETDARIYEIALEVG 206 Query: 258 FPDSDYFCRVFRRQFGLTPGEY 279 + D YF +VF++QFG+TP E+ Sbjct: 207 YHDDKYFRKVFKKQFGMTPNEF 228 >UniRef50_C6D490 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D490_PAESJ Length = 527 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 88/170 (51%), Gaps = 7/170 (4%) Query: 116 LLHPARQIQLPSLQRGE--GEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPG 173 LL R++ LQ+ + G +L+ L +SR ++ L + + R ++ Sbjct: 360 LLSSVRKMSFRQLQQNDFLGRHILS-LEGMSRF----QTLESLEEWMAQVIRKIIVFKQE 414 Query: 174 NSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 ++ P+ + + +V ++Y++P+T ++ F I+P +LS+ F Q ++ ++ + Sbjct: 415 HNIPKKKDIIAEVKEYVAEHYSEPITLADLSARFFISPYYLSQFFKQKTGDTYVNFLTRI 474 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 R+ KA+ +L++ L ++EV Q G+ D+ +F R+F + G P +Y R Sbjct: 475 RINKAKELLERTDLKVYEVCQMVGYSDTQHFARMFEKLTGYKPRDYRKRL 524 >UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K690_BACHD Length = 530 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 4/127 (3%) Query: 159 SLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLF 218 +LH+ R++ + Q L ++V D++ +PLT + +A+ ++P ++SKLF Sbjct: 397 EILHIVRTLQEWRTTDEQS----LMLLARDYVHDHFREPLTLDDLAKHIGLSPYYVSKLF 452 Query: 219 AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGE 278 + + F EYV +R+ A+ +L S+ E+ G+ D +YF RVF++ G +P + Sbjct: 453 KERFDLTFSEYVTQLRVEHAKQLLSLTQKSLKEITYEIGYKDPNYFSRVFKKLTGKSPSD 512 Query: 279 YSARFQG 285 Y G Sbjct: 513 YRKSING 519 >UniRef50_UPI0001C35C05 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C05 Length = 511 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 4/112 (3%) Query: 171 PPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYV 230 G+S PR + I N V+D Y + E +A+ N+ P +LS LF + ++Y+ Sbjct: 398 AAGDS-PR---IVERIKNIVRDEYRNDIGLEDIAERVNLAPAYLSYLFKKETGANLVKYI 453 Query: 231 RWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 RM +AR +L++ L I VA+ CG+ + YF R+F+ +G+TP +Y + Sbjct: 454 TDYRMEQARKLLEEGELKIVLVAKACGYENQPYFNRLFKNYYGMTPRQYREK 505 >UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=Clostridiales RepID=C5EPF6_9FIRM Length = 550 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA-QPLTRESVAQFF 207 E + I L SL+ L + + + + + ++++NYA + ++ +VA Sbjct: 411 ESHSITALKESLIRLFEGTMLLRDSQTASKYSQVLEEARAFIRENYAKEEISLNTVAARV 470 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 NI+P++ S +F+Q + F+EY+ VRM +A+ +L ++ E+ G+ DS YF + Sbjct: 471 NISPSYFSSIFSQEMGVTFVEYLTGVRMERAKELLMCSNMKTTEIGYEVGYKDSHYFGYL 530 Query: 268 FRRQFGLTPGEYSA 281 F++ G TP EY A Sbjct: 531 FKKTVGCTPKEYRA 544 >UniRef50_C0CU25 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU25_9CLOT Length = 476 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 60/101 (59%) Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 SI + D+Y + ++ +A F +TPN+LS F + M+F +YV +R+A+A+ +L Sbjct: 370 ESIIRYTDDHYTEDISVNGLADQFGLTPNYLSAQFKRETGMKFTDYVTGLRLAQAKKLLV 429 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + L + ++A R G+ + +F + F R+ +TP EY R++ Sbjct: 430 ESPLQVKQIASRVGYYTTSHFIKAFVRREEMTPLEYRNRYK 470 >UniRef50_C6CUJ6 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CUJ6_PAESJ Length = 528 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 57/87 (65%) Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 L+ E++A++F++ +++ K+FA+ + EY+ +VR+ +A+ +L+ + + EV++R Sbjct: 442 ELSVENIARYFHLDSSYIRKVFAKELNVSVAEYITYVRLNQAKQLLETTGIKLQEVSERV 501 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARF 283 G+ D+ YF +VF++ G+ P EY R Sbjct: 502 GYSDAGYFSKVFKKHCGVLPSEYMGRI 528 >UniRef50_C5RF55 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RF55_CLOCL Length = 292 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 51/98 (52%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I W++ NY +P+T +A F ++LS LF + I ++ R+ ++ ++ Y Sbjct: 188 IMEWIKANYYKPITISDIAYEFGYNADYLSSLFRKTSGSTLINFINKTRIDISKSLITNY 247 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +SI E A CGF D YF + F++ +TP +Y F Sbjct: 248 DISIKEAAYSCGFTDEKYFLKTFKKFEAMTPSQYKKAF 285 >UniRef50_C6CVW8 Two component transcriptional regulator, AraC family n=2 Tax=cellular organisms RepID=C6CVW8_PAESJ Length = 543 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 57/90 (63%) Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 +Q +YA+ LT +SVA ++TP LSKLF + F+EY+ +R+ KA+ +L + Sbjct: 445 LQRDYAESLTLQSVASAVHVTPVWLSKLFKKEKRQTFLEYLTDIRIEKAKEMLGDIQYKV 504 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 ++++ + G+ D +F ++F++Q G TP EY Sbjct: 505 YQISYQVGYKDPVHFSKLFKKQVGCTPKEY 534 >UniRef50_UPI0001C36195 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36195 Length = 145 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 55/95 (57%) Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 SI +++ NY L +A+ + + ++LS LF + + Y+ +RM KA +L++ Sbjct: 28 SIREYIEKNYDDSLNVADLARKYGLNVSYLSTLFKERTGINITSYIEGIRMEKAMNLLRE 87 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + + EVA G+ +S YF RVF++ G+TPGEY Sbjct: 88 TNWKVTEVAFHVGYSNSGYFSRVFKKYTGVTPGEY 122 >UniRef50_C0EDZ9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDZ9_9CLOT Length = 514 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 1/93 (1%) Query: 188 NWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 +V+++Y P L+ + VAQ +TP +LS+LF + F EYV RM KA +L+ Sbjct: 403 KYVENHYQDPELSLQEVAQHVFVTPQYLSRLFKGVVKVSFTEYVTHYRMQKAVSLLEDVS 462 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 SIH VA G+ DS YF F++ GL+P E+ Sbjct: 463 SSIHTVASEVGYHDSKYFAVCFKKSIGLSPTEF 495 >UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K9C1_BACHD Length = 510 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 56/91 (61%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++++++++PL+ +A +F+ P++LS F QH F EY+ VR+ KA+ L+ + Sbjct: 408 YIEEHHSEPLSLSQLANYFHFNPSYLSAYFRQHHDEGFSEYLNKVRIRKAKEWLKSSTIP 467 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 I E+ G+ D YFC+VF+++ G+ P Y Sbjct: 468 ISEIYALVGYSDHSYFCKVFKKRTGMPPSRY 498 >UniRef50_C5EJY2 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJY2_9FIRM Length = 516 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 58/99 (58%) Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 + N+VQ N+A ++ E A+ + +LS+ F Q RF+EY+ R+ KA+ +L Sbjct: 417 QQVLNYVQKNFASDISLEKCAEVTGSSYTYLSRQFKQETGQRFVEYLNQQRVNKAKSLLI 476 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 ++ +++ E+ ++ GF YF ++F+ GLTP E+ A+ Sbjct: 477 RHDMTMKEIIEQSGFRSYTYFFKIFKESEGLTPSEFMAK 515 >UniRef50_A9KSM8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSM8_CLOPH Length = 146 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 57/97 (58%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++Q+NY++ ++ + A+ + + S+LF Q + F Y+ R+ A+ ++ K ++S Sbjct: 41 YIQENYSKDISLQDAAKTMCYSEAYFSRLFKQCFHVNFTVYLTQYRIRIAKQLMLKQNIS 100 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 I E+ R G+ D++YF +VFRR GL P EY R G Sbjct: 101 IKEIGARVGYTDNNYFTKVFRRSTGLNPSEYRTRLMG 137 >UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C020E Length = 420 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 25/223 (11%) Query: 66 KQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL 125 K+++LVE A AA + +N+ LL V L+ +R L ++ L Sbjct: 210 KEKKLVEAVKSGQTADAAAI-LND----LLGHVLLSNANDLNIIKARVLELCTIISRVAL 264 Query: 126 PSLQRGEGEAMLTA--LTHLSRSP-LE------QNIIQPLVLSLLHLCRSVVNMPPGNSQ 176 S +R E L A L L S LE +I+ +L L + + +P Sbjct: 265 ESTKRIENTLSLNAVFLNELMESKSLEDLAFALHKVIKEFTDEILELNNTALFVP----- 319 Query: 177 PRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMA 236 + N++ YA+ ++ VA+ ++TP++ S +F + F +Y+ VR+ Sbjct: 320 ------IRKVINYINTYYAEEISLHKVAKLVHLTPSYFSTVFKKETGYSFTQYLNKVRIE 373 Query: 237 KARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +++L +++ EVA GF YFC VF++ G+TP ++ Sbjct: 374 HGKLLLMDTSMTVLEVAIEVGFDTDTYFCTVFKKVVGVTPNQF 416 >UniRef50_C8ZXM2 DNA binding response regulator n=4 Tax=Enterococcus RepID=C8ZXM2_ENTGA Length = 495 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 87/161 (54%), Gaps = 10/161 (6%) Query: 124 QLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLY 183 Q P+L R + ++T + R+ +++ L +L L + + P Q R + Sbjct: 338 QFPALTRENYDRIITRI----RASNTIQVLRQLFNEILQLAK---DQP---QQKRYSEIV 387 Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 ++++Y Q LT +S A+ +++ +L ++F + + F +YV ++R+ KA+ +L Sbjct: 388 QKAVGMIEEHYTQELTVKSAAEALHVSVVYLGQVFKKETELSFNQYVNFIRIKKAQQLLL 447 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +I+E+A G+ +++YF ++F++ GLTP E+ +++ Sbjct: 448 HTGQTINEIADAIGYNNTNYFSKMFKKLNGLTPKEFREKYE 488 >UniRef50_A0PM92 Transcriptional regulatory protein n=4 Tax=Mycobacterium RepID=A0PM92_MYCUA Length = 292 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 17/162 (10%) Query: 120 ARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRG 179 A + +L + Q+G G+A+ LT L ++ L L R VV G+ + G Sbjct: 143 AIEAELTTRQQGYGQAVTAHLTLL-------------LIELARLARDVV----GDLRRSG 185 Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 + L + + +A+PL+ VA +TP HL+ + + E++ RMA+AR Sbjct: 186 EPLLAEVFEVIDRRHAEPLSLRDVAAEVGMTPGHLTTIVRRRTGRTVQEWIIERRMAQAR 245 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +L L++ EVA+R G D YF R+F R G +P ++ A Sbjct: 246 ELLVATDLAVGEVARRVGISDPGYFSRLFSRAHGTSPRQWRA 287 >UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIX6_9CLOT Length = 330 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 47/265 (17%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--------VNNKPV------ 92 DF L V +G N+ + L EG++L + A + P V N V Sbjct: 74 DFFELLYVYKGSCVNMTREGEMPLNEGDLLLLNPNALHAPFAPGEENIVVNIIVRPSVFE 133 Query: 93 -MLLSLV-----FAPTWLGLSFYDSRTTSLL-------HPARQIQLPSLQRGEGEAMLTA 139 ++LSL+ F+ ++ ++ + TTS L HP + I ML A Sbjct: 134 NVMLSLIADNKLFSNFFVNYLYHINMTTSYLYFPKDEEHPIKFIM----------DMLIA 183 Query: 140 LTHLSRSPLEQNIIQPLVLSLLH-LCRSVVNMPPGNSQPRGDF----LYHSICNWVQDNY 194 +LS N++Q +++ L L RS M N DF L I + + N Sbjct: 184 -EYLSHDICYTNVMQAILVQLFAALARSYRKM---NKVEIEDFEKSQLVVDIISHINQNI 239 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 A +T + +++ F + +++SKL + F E V ++R+ +A+ L+ L+I E+ Q Sbjct: 240 A-TVTLKELSERFQYSSSYISKLINSYTGKNFSEIVHFLRLDRAKKYLENKDLTITEITQ 298 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEY 279 GF DS+YF +VF+ +F L+P EY Sbjct: 299 AVGFSDSNYFYKVFKNRFNLSPSEY 323 >UniRef50_D1PQT3 Putative two-component response regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQT3_9FIRM Length = 519 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 56/95 (58%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 ++ NYA+ ++ + A + ++ HLS+ F RF+E++ VR+ A+ +L + L Sbjct: 420 EFILQNYARDISLQDCADYAGVSYTHLSRAFKSEVGQRFVEFLNAVRLRAAKALLIRQDL 479 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 S+ E+ +R GF +YF +VFR G+TP E+ A+ Sbjct: 480 SMKEIVERTGFRSYNYFFKVFRESEGMTPSEFVAK 514 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 58/100 (58%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I N++++NY+Q L+ + ++ FN++P +LS+ F ++ M Y+ VR+ K+ L Sbjct: 187 ITNYIKENYSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNT 246 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 SI E+A GFP+ F +VF+ + +TP +Y + + Sbjct: 247 DQSITEIALEHGFPNEKSFNKVFKTFYNITPNQYRKKIKA 286 >UniRef50_A4XMX4 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XMX4_CALS8 Length = 510 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 5/148 (3%) Query: 139 ALTHLSRSPLEQN-IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP 197 +L + RS L+++ I+ ++ LL + V NS I ++++NY + Sbjct: 363 SLKFIYRSNLQKSKFIEKVMEILLQIAEYVTEATKFNSSS----FMKKIELFIKENYNKD 418 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 +T +S+AQ F I P +L ++F +H M F +Y+ +R+ +A+ +L K I+E+A+ G Sbjct: 419 ITIKSIAQQFYINPIYLGRMFKKHFNMPFNKYLHILRIEQAKKLLLKTDKKIYEIAKEVG 478 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSARFQG 285 + D+DYF F G +P +Y + G Sbjct: 479 YNDTDYFALKFEEYVGKSPSKYRSSIIG 506 >UniRef50_UPI0001788C2F two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C2F Length = 532 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 59/106 (55%) Query: 174 NSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 S R L S ++++NY Q L+ S+A+ +N P + S++F + + FI+YV V Sbjct: 412 ESGDRDATLIESAKRYIEENYMQELSLTSLAEQYNYHPTYFSEMFKEGAGVSFIQYVTEV 471 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 RM A +LQ+ L++ ++A+ GF YF F++ F +P E+ Sbjct: 472 RMKHAVRLLQETRLTVWDIAELTGFSSPGYFSSKFKKMFNQSPSEF 517 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 77/143 (53%), Gaps = 11/143 (7%) Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL--YHSICNWVQDNYAQP 197 LTH+ L+ VL ++H+ V + R L I +++++Y + Sbjct: 143 LTHIDHEKLQS------VLDMMHI---VAKYILDSEMIRISSLSSIEKIIEYIKNHYMED 193 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 +T + +A+ ++P +LS LF + + F EY+ +R+ K++ +++ LSI E+++ G Sbjct: 194 ITLDDLAKMVYLSPTYLSYLFKKQLGITFKEYLINIRLKKSKELIETTDLSIGEISKMVG 253 Query: 258 FPDSDYFCRVFRRQFGLTPGEYS 280 D +YF R+F+++FG++P Y Sbjct: 254 IEDQNYFSRLFKKKFGVSPLNYK 276 >UniRef50_D1N5H4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5H4_9BACT Length = 285 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 7/149 (4%) Query: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 +A+L A + + L + +VL LL+ R S P + L++ + +++Q Sbjct: 137 QALLAAGSDSRAARLNLRALLEMVLELLYRERE-------TSIPEEELLWNRVFDYLQYT 189 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 + ++RE +A I P LS+L + EY+ +R+ A +L++ L + E+A Sbjct: 190 FCNDISREDIAAGAGIHPARLSRLVRSRTGLAVREYLNRMRLEYAVQLLRESRLPVEEIA 249 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 +CGF YF R+FRR++ ++PGE+ R Sbjct: 250 VQCGFNYPSYFIRLFRRRYRISPGEFRRR 278 >UniRef50_C6D075 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D075_PAESJ Length = 295 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 52/91 (57%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +++DN ++PL E VA + N++ LS+LF G F+ Y+R R+ A ++L+ S Sbjct: 199 YIRDNLSRPLKIEEVADYMNLSTRQLSRLFQMDGGDTFLSYLRNERLKHAEILLKTSLAS 258 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + E+A GF YF VF Q G+ PGEY Sbjct: 259 LKEIAADSGFQSVHYFTNVFTEQMGMPPGEY 289 >UniRef50_A7VPU9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPU9_9CLOT Length = 520 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 56/94 (59%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++QD++ + +T++ VA+ + +L LF + + F+EYV R+ KA+ L + Sbjct: 420 YIQDHFTESITQQQVAEALGFSSVYLGLLFRKEMQLSFLEYVTKCRIDKAKYYLVHTNKK 479 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 I+E++ G+ S YF ++F++Q G+TP EY R Sbjct: 480 IYEISDHVGYMTSQYFSKIFKQQTGMTPAEYRER 513 >UniRef50_C6CV92 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV92_PAESJ Length = 775 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 70/134 (52%), Gaps = 1/134 (0%) Query: 147 PLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ-PLTRESVAQ 205 P + + L L+ L LC ++ +S R + + ++ + Y+ L+++S+A Sbjct: 635 PQDYYTLDELHLAFLSLCTAICEEAKPSSMERNEMIIETVKELIWQKYSDYNLSQQSIAS 694 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 ++ ++ KLF M EY+ VR+ +A+ +L K +I E+ ++ G+ + YF Sbjct: 695 TVKLSSAYVGKLFKDSCGMTITEYLNDVRLRRAQELLLKEDSTITEIMEKVGYGNQSYFF 754 Query: 266 RVFRRQFGLTPGEY 279 R+F+ +FG TP E+ Sbjct: 755 RLFKSKFGTTPKEF 768 >UniRef50_B1ZXD9 Transcriptional regulator, AraC family n=2 Tax=Opitutaceae RepID=B1ZXD9_OPITP Length = 430 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 52/92 (56%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++++ A LTRE VA+ ++P+H S L F E + +R+ +A +L + Sbjct: 328 EYMEEHLAGELTREEVARAAGLSPSHFSHLMRDKTGRSFTELLTRLRVDRACHLLARTET 387 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + ++AQ CGF D YF RVFRR TPGE+ Sbjct: 388 ELAQIAQSCGFGDQSYFTRVFRRATQQTPGEF 419 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 D + +I +++ N +T E A ++P++ S++F + F Y+ +R+++ R Sbjct: 309 DIICKAI-EYLKRNCRDRVTLEDTAGHVGLSPSYFSRVFKEEVGESFNSYLTALRISRGR 367 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 +L SI E+ RCGF D YF +VFR+ G+TPG + AR Sbjct: 368 AMLLDTDASIAEICDRCGFDDQSYFTKVFRKYTGVTPGRFRAR 410 >UniRef50_C9A684 Predicted protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A684_ENTCA Length = 713 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 4/127 (3%) Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 ++ + L + + N+ + D I ++ NY L+ +AQ F+++ Sbjct: 585 VKKTIFFLFDTLITQIETTENNNGSKTD----EIIQFINSNYCSDLSLTDIAQQFHLSEA 640 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 +LS+L + +M F YV +R+ KA+ ++ + SI+E+A + GF +++ F RVF++ Sbjct: 641 YLSRLIKERLSMSFKPYVNQLRVEKAKRLMSEQESSINEIASKVGFKNTNSFIRVFKQFE 700 Query: 273 GLTPGEY 279 G TPG Y Sbjct: 701 GTTPGTY 707 >UniRef50_C6CZ56 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ56_PAESJ Length = 519 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 59/103 (57%) Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 L+ +I +V + Q +T + VA F+ TPN+L LF + F +++ RM + R + Sbjct: 416 LFDNIMAFVDERLEQKITLKEVAAHFDFTPNYLGTLFKEETGTLFSDWLNERRMDRVREL 475 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 L L ++E+A+R G+ + YF R F++ G+TPGEY + + Sbjct: 476 LADPCLKVYEIAERVGYKNIIYFNRQFKQFTGMTPGEYRKKHK 518 >UniRef50_A8SAS3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAS3_9FIRM Length = 271 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 1/110 (0%) Query: 171 PPGNSQ-PRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEY 229 P G + R + + +++DNY L+ +SV++ +I+P +LS F ++ M F++ Sbjct: 149 PAGEGESDRNALVMDHVRKYMEDNYMADLSLDSVSEILHISPAYLSAQFKKYQKMNFLDC 208 Query: 230 VRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + +R+ A+ +L S EVA G+ D+ YF R F+++ G+TP +Y Sbjct: 209 LTELRINAAKELLADPFRSAAEVASMVGYEDASYFARAFKKRTGMTPTQY 258 >UniRef50_C9L8L2 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9L8L2_RUMHA Length = 191 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 54/91 (59%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + N++ NY + L+ + +A+ ++P +LS +F Q M +++ RM KA+ +L+ Sbjct: 84 VKNYIYQNYQEELSVDILAEKVYLSPGYLSYIFKQETGMNLNRFIKAFRMDKAKELLENS 143 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 I ++A+ GF ++ YFCR FR FG+TP Sbjct: 144 QKKISQIAKEVGFSNNSYFCRSFREYFGVTP 174 >UniRef50_UPI0001B9EC7D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EC7D Length = 280 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 14/195 (7%) Query: 97 LVFAPTWLGLSFYDSRTTSLLHP-----ARQIQLPSLQRGEGEAMLTALTHLSRSPL--- 148 L F P W+ ++ + LL P ++ L R E E ML + LS S Sbjct: 78 LHFDPAWICRGLSETAKSILLDPFETLRNHRMTLTGENREEFEGMLADIHRLSSSTAGFR 137 Query: 149 EQNI---IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQ 205 ++ + IQ ++ + C++ V S+ + + ++V++NY LT E +A+ Sbjct: 138 QERMTLRIQEMMYVIADWCQAAVQDHDSISEKERHVQH--VVSFVEENYMLDLTLEGIAR 195 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY-HLSIHEVAQRCGFPDSDYF 264 +IT ++LS LF + +YV R+ +A+++L+ + HLSI E++Q GF +F Sbjct: 196 DMHITKHYLSSLFKEVTGTTVFKYVYHRRINQAKIMLRLHPHLSITEISQASGFKHLAHF 255 Query: 265 CRVFRRQFGLTPGEY 279 R+F+ G TP Y Sbjct: 256 SRMFKAMVGTTPEHY 270 >UniRef50_C2HBK3 AraC family response regulator n=19 Tax=Enterococcus faecium RepID=C2HBK3_ENTFC Length = 502 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 62/94 (65%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I +VQ+NY + + + +++ ++ + ++LS +F + + F +Y++ VR++KA++ L + Sbjct: 402 IYEFVQENYEKEINLQLLSEKYHFSYSYLSAIFTEKFGINFSKYLKKVRISKAKLFLTET 461 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L++ E+ ++ G+ + YF RVF+ + G+TP +Y Sbjct: 462 RLTLTEICEKVGYTELGYFSRVFKEETGMTPSQY 495 >UniRef50_A9KTC8 Two component transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=A9KTC8_CLOPH Length = 253 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 57/99 (57%) Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 ++ S ++++ Y + LT V+ IT +LS LF Q+ F+EY+ +R+ A Sbjct: 141 YIVSSAIEYMEEYYHKNLTLIEVSNKVGITAGYLSTLFTQNMNCGFVEYLNKIRIKHACS 200 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L++ + +E+A + GF D YF +VF+++ G+TP EY Sbjct: 201 YLEQNYFKTYEIAYKVGFKDEKYFSKVFKKETGITPYEY 239 >UniRef50_UPI0001C35FBC two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35FBC Length = 508 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 62/119 (52%) Query: 164 CRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGT 223 CR +VN + ++Q+ YA+ L E VA + TPN+ S +F Sbjct: 387 CRRIVNSYEESRNGHYSANIRKALAYIQEYYAKDLLVEEVAAYIGKTPNYFSSIFRTEVG 446 Query: 224 MRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + F EY+ R+ +A+ ++++ + I+E+A++ G+ D YF +VF++ G++P R Sbjct: 447 VTFREYLNHYRIERAKELIEESDMMIYEIAEQVGYSDYTYFSQVFKKMTGISPTSMRGR 505 >UniRef50_UPI0001C35C03 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C03 Length = 301 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 38/263 (14%) Query: 19 GLVLNPQLLG-RVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEG-EML 76 G +L+ + +G R+ S + V P ++ + RGE + E + EG + L Sbjct: 67 GTLLSEETIGKRIGKNSDAVTYHV------LPVVEGLKRGELRSAYELLAAEIDEGVKTL 120 Query: 77 FIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 F P PV+L V + + ++ + +Q+ SLQ+ E Sbjct: 121 FSP-----------PVLLKQRVIFALFQIMRNFEVLISGNFKKEANLQISSLQKAE---- 165 Query: 137 LTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 LT L RS L L L + + GN G + +++++Y Sbjct: 166 --TLTLLKRS---------LYAFFLDLGKELNCQKEGN----GRDIMTDCGEYLENHYMD 210 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 + ESVA+ ++ P++ S LF F EY+ +RM KAR +L + ++A Sbjct: 211 EINLESVAEKYHFNPSYFSTLFKNTYKSTFSEYLIRIRMEKARELLLTTESRVRDIAVLT 270 Query: 257 GFPDSDYFCRVFRRQFGLTPGEY 279 G+ D++YF R F+R + +TP EY Sbjct: 271 GYRDANYFVRAFKRYYEMTPEEY 293 >UniRef50_D1PQV2 Putative two-component response regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQV2_9FIRM Length = 530 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 7/128 (5%) Query: 159 SLLHLCRSVVNMPPGNSQP-------RGDFLYHSICNWVQDNYAQPLTRESVAQFFNITP 211 S+ LCR V G Q + D +VQ +YA+ +T E VA P Sbjct: 398 SVTTLCRCVCEAMEGELQTLHEQQLRQEDRPIRVAMEYVQKHYAEHITLEDVAAMSGFNP 457 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 + S +F + F +Y+ VRMA A+ +L+ +++EVA+ G+ D+ YF + F R Sbjct: 458 TYFSDVFKRKSGKNFSDYLTEVRMAAAKEMLRNTRKTVYEVAEAAGYKDAKYFSQQFARY 517 Query: 272 FGLTPGEY 279 G+ P EY Sbjct: 518 AGMKPTEY 525 >UniRef50_C6CWB0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWB0_PAESJ Length = 530 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 58/119 (48%) Query: 161 LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQ 220 L CR ++ R + I + + Y PLT E +A+ ++PN++ +F + Sbjct: 407 LRFCRELLKAAAERDLDRHQSVAEQIMKLIAERYHLPLTVEDIAKEVYLSPNYVRTIFKE 466 Query: 221 HGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 ++Y+ +RM A +L+ L + ++A R + + YFC VF++ G TP EY Sbjct: 467 KTGETILDYLTRIRMNHAAELLKDRALKVRDIAHRVSYENVSYFCSVFQKHKGSTPNEY 525 >UniRef50_C0D789 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D789_9CLOT Length = 535 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 54/91 (59%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++ ++YA LT E V+ ++P +L+ +F + M F+EYV VRM A+ +L++ + Sbjct: 440 YIGEHYASALTLEEVSAVAGLSPAYLATVFKKDTGMTFLEYVSKVRMDMAKQLLKETSCT 499 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + ++ ++ G+ D YF + F + GL P EY Sbjct: 500 VADICEKVGYSDVRYFTKTFTKYSGLKPNEY 530 >UniRef50_C6JC89 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC89_9FIRM Length = 537 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 28/126 (22%), Positives = 71/126 (56%) Query: 154 QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 + ++ LL+L +++ + R L S+ ++++ NY+ L+ + + + F+++ + Sbjct: 408 EEVLNCLLNLFGTLIKQNTEGTDERNRKLVQSVLSYIEKNYSGDLSMDDLTEKFHVSRTY 467 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 +S+L ++ F+EY+ VR + ++ +E+A+ G+ D Y+ +VF++++G Sbjct: 468 ISRLLKKYAGKSFLEYLTDVRFQQVEKLIADNKYKQYEIAEMVGYKDFGYYIKVFKKRYG 527 Query: 274 LTPGEY 279 +TP E+ Sbjct: 528 ITPNEF 533 >UniRef50_B1QT82 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1QT82_CLOBU Length = 359 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 59/107 (55%) Query: 175 SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 S D + ++IC+++ +N L + +A+ F + +LS FA ++ F +Y+ V+ Sbjct: 245 SIKTSDGMINNICDYILNNIDSDLKLKFLAKEFYVNSTYLSNTFAIKTSIGFRDYITIVK 304 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 MA+A + L +EVA + GF D +YF ++F+R +G P +Y Sbjct: 305 MARAEYLFVNTKLKTYEVAHKLGFRDINYFSKLFKRYYGKNPSQYKG 351 >UniRef50_C6J6V9 Response regulator n=2 Tax=Bacillales RepID=C6J6V9_9BACL Length = 517 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 58/98 (59%) Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 L +I +++ +Y L+ + A F ++PN++S+LF + +Y+ +R+ KA+ + Sbjct: 415 LIRNILEYIEHHYQDSLSLKLFADLFQVSPNYVSRLFKEEVGQGLFDYINELRINKAKEL 474 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L+ Y I+EVA++ GF + +F VF + G++P +Y Sbjct: 475 LKDYRYKIYEVAEKVGFSNQAHFAIVFNKYTGVSPKQY 512 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 55/92 (59%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++++Y + +T E A+ + +H K F Q+ + FI+Y+ R+ KA +L Sbjct: 240 EYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPD 299 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + VAQRCGF + YF R+FRR++G TPGEY Sbjct: 300 PVTAVAQRCGFDNISYFNRLFRRKYGKTPGEY 331 >UniRef50_A8RS96 Putative uncharacterized protein n=5 Tax=Clostridium RepID=A8RS96_9CLOT Length = 286 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 61/110 (55%) Query: 170 MPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEY 229 MP + R + +I ++++NY + ++ + A+ N + + KLF Q F Y Sbjct: 169 MPRDDGDGRLAQVAETIREYIRNNYMKEISMQDAARMMNYSDAYFCKLFKQCFDQNFTSY 228 Query: 230 VRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + R+ +A+ +L+ +S+ +V+ + G+ DS+YF +VF+R G+ P EY Sbjct: 229 LTGFRVNEAKKLLKDRSISVKDVSMQVGYYDSNYFAKVFKRMTGMIPSEY 278 >UniRef50_UPI0001C350B3 two component transcriptional regulator, AraC family protein n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C350B3 Length = 455 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 74/135 (54%) Query: 145 RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 RS + ++ + + L L + + + D + ++ +++ D+ + LT V+ Sbjct: 309 RSIYRCSSVEQITVWLETLRNGLCEILKSRKKTYKDHIVTNVKHYINDHIEERLTLNEVS 368 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 F I+ N+LS LF ++ + F EY+ ++A+++ +L + +L I+EVA R GF YF Sbjct: 369 DVFGISHNYLSVLFKKNCGIGFSEYITQTKIARSKSMLLEENLKIYEVADRLGFETPCYF 428 Query: 265 CRVFRRQFGLTPGEY 279 +VF++ G++P EY Sbjct: 429 SKVFKKVEGVSPREY 443 >UniRef50_A5TXQ0 Possible AraC family transcriptional regulator n=3 Tax=Fusobacterium RepID=A5TXQ0_FUSNP Length = 515 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 63/109 (57%) Query: 176 QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRM 235 + DF+ + N+++ Y + L+ VA N++ ++ S+ F + + F Y+ +R+ Sbjct: 405 KKNNDFILDNSINFLEKYYYKDLSLTEVANVCNMSDSYFSRKFKEKFNINFSTYLLNIRL 464 Query: 236 AKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 KA+ +L++ +L+I +++ GF DS YF + F++++G+ P Y F+ Sbjct: 465 EKAKELLKEKNLNIENISEMVGFKDSSYFSKSFKQKYGIAPHYYRDNFK 513 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 62/100 (62%) Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 ++ ++ DNY Q LT VA+ F I+P++LS+LF Q F +Y+ +R+ +A+ +L++ Sbjct: 186 AVVRYLNDNYRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRE 245 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 SI ++A R GF + +F ++F+R L+P Y +++ Sbjct: 246 SDDSITDIAWRSGFSNFSHFGKMFKRTVQLSPRAYRQQYR 285 >UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16 Tax=Enterobacteriaceae RepID=C0Q3L5_SALPC Length = 322 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 13/242 (5%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGL 106 +F L +V RG ++L + R+ G++ +I A + + ++L ++++ P L L Sbjct: 77 EFCELVMVWRGNGLHVLNERPYRITRGDLFYIRAEDKHSYTSVNDLVLQNIIYCPERLKL 136 Query: 107 SFYDSRTTSLLHPAR---QIQLPSLQRGEGEAMLTALTHLS--RSPLEQNIIQ----PLV 157 + A+ +L S+ + ++ L H S R PL + + LV Sbjct: 137 NVNWQAMIPGFQGAQWHPHWRLGSMGMNQARQVINQLEHESNGRDPLANEMAELLFGQLV 196 Query: 158 LSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKL 217 ++L + ++P + + D L ++ N ++ P ++ Q + L + Sbjct: 197 MTLKRHRYATDDLPTTSRETLLDKLITALANSLEC----PFALDAFCQQEQCSERVLRQQ 252 Query: 218 FAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPG 277 F M +Y+R VR+ A+ +LQ L + E++ +CGF DS+YF VF R+ G+TP Sbjct: 253 FRAQTGMTINQYLRQVRICHAQYLLQHSPLMVSEISMQCGFEDSNYFSVVFTRETGMTPS 312 Query: 278 EY 279 ++ Sbjct: 313 QW 314 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 52/255 (20%), Positives = 118/255 (46%), Gaps = 29/255 (11%) Query: 56 RGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTS 115 +GE+ ++ + + E + FI + + +N P ++VF L +DS S Sbjct: 48 KGEFQVEIDMDKHVVHEETICFINSEELHFIKSNHPCKESAIVFDLKMLSFDMFDSIQGS 107 Query: 116 LLHP--ARQIQLPSL---QRGEGEAMLTALTHL----------SRSPLEQNIIQPL---- 156 L+ P ++++P + GE +L + + S++P E NI + L Sbjct: 108 LIQPLLNGELKMPHFIFKKDKHGEEILKEYSEILEAYKISGQISQNP-EGNITEKLSSQI 166 Query: 157 --------VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFN 208 +L++L+ ++ N R +++ +I +++Q+NY++ + + +++ N Sbjct: 167 KIKASLLKILAILYENNLLIKENNKNKDYRVEYIKTAI-SYIQNNYSEKIHIKDLSKQIN 225 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 + + + F + +EYV R+ KA+ +L++ + + ++ CGF + F +VF Sbjct: 226 MNEQYFCRFFKRMIGKTPMEYVNEYRIKKAKELLRETNRQVMDICLECGFHNMGNFIKVF 285 Query: 269 RRQFGLTPGEYSARF 283 ++ G+ P +Y F Sbjct: 286 KKHTGINPMKYRKNF 300 >UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=C6D4D7_PAESJ Length = 289 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 62/251 (24%), Positives = 118/251 (47%), Gaps = 18/251 (7%) Query: 46 IDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLG 105 +DF L IVL G +++ + + +G++ I ++ + + ++++ P L Sbjct: 34 VDFSELVIVLNGNATHIVNTEVSFIKKGDVFVIDGATSHAYKDPHDFRICNIMYRPDILT 93 Query: 106 LSFYDSRTTS------LLHP-ARQIQ---------LPSLQRGEGEAMLTALTHLSRSPLE 149 + D RT+ +L P R IQ +PSL+ A + ++ Sbjct: 94 SAGPDLRTSIGYQALFVLEPFYRNIQPFNSKLSLPIPSLEYVSSLAAFMIEEYTNKLQGY 153 Query: 150 QNIIQPLVLSLL-HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFN 208 Q +++ + L+ +L R N Q L ++I ++++D+Y +PLTRE +A Sbjct: 154 QTMLRSRFMELVVYLSRQYQNQDQQGIQGNLMHLANAI-SFMEDHYLEPLTREQIADKSG 212 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 I+ HL+++F + Y+ +R+ A +L+ + I EV+ + GF DS+YF R F Sbjct: 213 ISVRHLNRIFQSYYPTTPFAYLLRLRLEHACHLLKTTPVPITEVSYKSGFNDSNYFTRQF 272 Query: 269 RRQFGLTPGEY 279 + +GL P Y Sbjct: 273 TKVYGLAPKVY 283 >UniRef50_C6LFA8 Two-component response regulator n=3 Tax=Clostridiales RepID=C6LFA8_9FIRM Length = 348 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 58/107 (54%) Query: 177 PRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMA 236 P G FL + ++Q NY + +T VA ++ HLSKL H F E + +R+ Sbjct: 242 PAGSFLVNKALEYMQKNYRRKVTLTDVADSIFVSQWHLSKLLNSHTGQSFSELMNSIRVE 301 Query: 237 KARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +A+ +L+ L + +VA++ GF D +F RVF++ G++ E+ R Sbjct: 302 EAKKLLEDPALRVGDVAEQVGFVDMAHFSRVFKKVTGISANEFRNRL 348 >UniRef50_A4ITD0 Sugar ABC transporter (Permease) n=3 Tax=Bacillaceae RepID=A4ITD0_GEOTN Length = 366 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 55/106 (51%) Query: 174 NSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 + + D+L +++ Y +P+ VA NI+ N+ S +F Q F EYV + Sbjct: 251 DHEETNDWLIERALEYIRQFYREPIKASEVANVVNISANYFSTIFRQKTGKTFNEYVNLL 310 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 R+ +AR +L + L + +A GF + YF VF++ G+TP EY Sbjct: 311 RVNEARKLLSETSLRVGVIANNVGFHEYKYFVEVFKKFTGMTPTEY 356 >UniRef50_D1N143 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N143_9BACT Length = 277 Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 58/105 (55%) Query: 175 SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 SQP D ++ ++ YA+ +T A+ ++P+ LS LF Q M F EY+ +R Sbjct: 164 SQPVRDARILAVLEFLNARYAERITIRQAAELVYLSPSRLSHLFRQTCGMDFSEYLLALR 223 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + A +L L+I E+A RCGF D ++F +FR++ G T EY Sbjct: 224 LGVACELLAGTDLAIGEIAVRCGFGDQNHFSAIFRKRTGRTASEY 268 >UniRef50_UPI0001B9ED0F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED0F Length = 775 Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 52/94 (55%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I + VQ+ Y Q ++ + A N P ++S++F + + F EY+ RM A+ +L Sbjct: 671 IVDIVQEQYGQDISLDYCAAVMNFNPAYISRVFKKEMGVSFSEYISEYRMNIAKNLLATT 730 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + + E+ ++ + + F R FRR FGLTPG+Y Sbjct: 731 EMKVSEIGRKVSYTNISAFIRTFRRAFGLTPGQY 764 >UniRef50_C0EIY2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY2_9CLOT Length = 252 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 2/111 (1%) Query: 169 NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIE 228 ++ P +SQ G + H + V + LTRE +A+ ++ P++LS LF + + E Sbjct: 136 SLYPADSQEPG--VVHRVKEIVSQFISHDLTREQIAELVHLAPDYLSHLFKKETGVTLSE 193 Query: 229 YVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 Y+ R+ A+ +L + L + +A + G+ YF RVF++ +G+TP EY Sbjct: 194 YIASQRLTMAKYLLAQTSLPVSSIADKVGYSYVSYFNRVFKKAYGMTPVEY 244 >UniRef50_C6D742 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D742_PAESJ Length = 382 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 52/77 (67%) Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 VA ITP +LS LF + FIE++ +R++ A+ +L++ HL +EVA+R G+ DS Sbjct: 302 VADKVFITPAYLSSLFKSKMGVTFIEHLTRIRISHAKKLLKQTHLRNYEVAERVGYQDSR 361 Query: 263 YFCRVFRRQFGLTPGEY 279 YF ++F+++ GL+P E+ Sbjct: 362 YFSQIFKKKVGLSPSEF 378 >UniRef50_B0NDZ7 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDZ7_EUBSP Length = 515 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 4/132 (3%) Query: 152 IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITP 211 I++ V L ++ N G +Q R + + ++ N A L+ E +A+ +I+ Sbjct: 377 ILENTVNELFQYTKNQFNGSNG-TQNR---IIENTIKFIHQNLATALSLEVIAEHLHISA 432 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 +HLS+ F ++ EYV R+ KA+ L+ ++ +E+A + G+ D+ YF +F++ Sbjct: 433 SHLSRTFKKYCDESLTEYVNKTRIEKAKEYLKDSNMLTYEIANQVGYNDATYFSSIFKKY 492 Query: 272 FGLTPGEYSARF 283 G +P EY ++ Sbjct: 493 TGFSPSEYRQKY 504 >UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EI06_PEDAC Length = 280 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 18/255 (7%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGE-YGNLLEAKQQRLVEGEMLFIPARAANL--PVNNKP 91 QP P + ID+ L V+ G+ Y + + Q L G+ +PA N+ P P Sbjct: 33 QPTK-PFEYIPIDYWVLHYVMDGKGYFSAGNSDLQHLSAGDTFLLPANCPNIYYPDKADP 91 Query: 92 VMLLSLVFAPTWLGLS-FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQ 150 + W+G+S ++ + + +R+ + + + + ML H+ ++ ++ Sbjct: 92 -------WTYVWVGISGELTAKYLAQIGLSRRNFVINASIDKTKEML--FNHVYQAFKDK 142 Query: 151 NIIQPL--VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFN 208 Q L V SLL + N +G ++ I +V +N+A LT +A N Sbjct: 143 QNFQSLSAVYSLLDYLQQ--ENHANNPVNQGKQIFDKILLYVDENFASGLTISQIAANNN 200 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 + ++L KLF ++ + +YV +++ KA +L+K L+I +++Q CGF S YF VF Sbjct: 201 VDRSYLYKLFQRYLGKKPSQYVHQLKLQKACSLLRKSSLNITQISQECGFSSSAYFTNVF 260 Query: 269 RRQFGLTPGEYSARF 283 ++ TP +Y RF Sbjct: 261 AKEMNSTPLKYRNRF 275 >UniRef50_UPI0001692E78 DNA-binding response regulator, AraC family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E78 Length = 520 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 58/93 (62%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + + VQ +Y++ ++ ++++ ++ PN+L +LF + M F EYV R+ KA+ +L + Sbjct: 420 MLDRVQQSYSEEISLKTLSYSMDMHPNYLGQLFQKEMEMTFSEYVNTFRIEKAKHLLLQT 479 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGE 278 L +E+A R G+ D YF R+F++ G++P E Sbjct: 480 ELKTNEIAARVGYTDPTYFYRIFKKYVGVSPTE 512 >UniRef50_A6M1U3 Response regulator receiver protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1U3_CLOB8 Length = 400 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 1/93 (1%) Query: 189 WVQDNY-AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++DNY + L+ ++ +T ++LSKL + + FI+Y+ +R+ KA I++ + Sbjct: 305 YIEDNYYSNELSINYISNKLEVTSSYLSKLLKKETGLSFIDYLTKIRIEKAMYIMEDPAV 364 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 I++VA+ G+ + YFCR F++ G++P EY Sbjct: 365 KIYDVAELVGYSNQHYFCRAFKKVVGVSPTEYK 397 >UniRef50_C1I3E9 Response regulator receiver protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3E9_9CLOT Length = 522 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 I ++L L + VNM + I ++ ++Y +PL +A+ FN Sbjct: 385 INHIILELKDIISKNVNMEEQRIKE--------ILEYINEHYDKPLELSDIAKAFNFNYY 436 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 +LS F H F EY+ +R+ KA +L++ + E++ G+ D YFCRVF++ Sbjct: 437 YLSFYFNNHCKEGFSEYLNRIRVEKACELLKENKAYVSEISSIVGYSDHSYFCRVFKKIV 496 Query: 273 GLTPGEY 279 G TP Y Sbjct: 497 GYTPSNY 503 >UniRef50_C6D416 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D416_PAESJ Length = 513 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 58/92 (63%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++ ++YA+ LT +S+ F+I PN+L +LF + F +Y+ R+ KA+ +L L Sbjct: 419 YIHEHYAEALTLKSLGLQFHIHPNYLGQLFNKQTGDTFTDYLNKYRIDKAKELLADSRLK 478 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 ++E+A++ G+ ++ YF + F++ G+ PG++ Sbjct: 479 VNEIARQVGYWETGYFYKQFKKHVGMVPGDFK 510 >UniRef50_C6J1Q8 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J1Q8_9BACL Length = 542 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 57/97 (58%) Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 I ++ +Y LTR +A+ + P++L++LF + + YV VR++ A+ +L+ Sbjct: 431 EEIKQYIHAHYGDELTRNDLAEVVYLNPDYLARLFKKETGISLGSYVIQVRISVAKQLLE 490 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 LS++ VA + G+ + YF ++F+++ G+TP EY Sbjct: 491 TTKLSVYAVANQVGYANYSYFSKLFKQEVGVTPNEYK 527 >UniRef50_UPI0001C358FB two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C358FB Length = 273 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 55/93 (59%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 N+++D+Y + ++ ES+++ + N+ S+LF + F++Y+ R+ KA+++L Sbjct: 170 NYMEDHYHEDISLESISEVVFLNKNYFSELFKKETGKSFVQYLTEYRLEKAKLLLAISGF 229 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 EVA GF ++ YF VF++ G TP EYS Sbjct: 230 KGSEVADMTGFQNNSYFISVFKKYVGCTPKEYS 262 >UniRef50_C0EDG6 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDG6_9CLOT Length = 517 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 3/149 (2%) Query: 136 MLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 +L++L + +Q I L + R + P S D L + + ++ NY Sbjct: 362 ILSSLDQDNDDLFKQAIGLRTADDLFAMLRELGQSPEDAS--NSDSLINRVAAYLSQNYP 419 Query: 196 QP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 P L+ AQ ++P++LS++F Q + F +Y+ +RM +A+ + ++ L ++A Sbjct: 420 DPSLSLNKAAQSVYVSPSYLSRIFKQKLNLSFTDYLVKLRMEEAKKLCKQKELKTAQIAA 479 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 + G+ D+ YF F++ FG+TPG Y + Sbjct: 480 KVGYRDASYFTLCFKKYFGMTPGCYRKTY 508 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 52/91 (57%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++ +Y PLTR+ +A + ++ ++L+ F Q +EY+ R+ +AR +L + S Sbjct: 1103 YIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQELGTTPVEYLNRYRVLQARHLLAESDKS 1162 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 I +A GF S YF RVFR++ G +P EY Sbjct: 1163 ITNIALEVGFSSSSYFSRVFRKEVGQSPEEY 1193 >UniRef50_Q0TS33 Transcriptional regulator, AraC family n=6 Tax=Clostridium perfringens RepID=Q0TS33_CLOP1 Length = 506 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 57/99 (57%) Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 + + +++ Y+ L+ + +A N TP +LS +F + ++Y+ RM KA+ L+ Sbjct: 406 NKVIKIIKNEYSSELSLDYIADKVNFTPTYLSYVFKKETGSNIVKYITDFRMNKAKEFLE 465 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + ++ I +V + CG+ + YF R+F+ FG+TP ++ + Sbjct: 466 EGNMKIVQVGKACGYENQSYFNRIFKNYFGVTPNQFKRK 504 >UniRef50_A4XMI3 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMI3_CALS8 Length = 251 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 1/102 (0%) Query: 179 GDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKA 238 GD + S+ +++ +YAQ +T VA + ++ P +L +L + F E + VR+ KA Sbjct: 139 GDVI-KSVFDYLNKHYAQQITLNDVANYVHLHPVYLGRLLRKKVGKTFKEILTEVRLKKA 197 Query: 239 RMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 +L+ L +EVA+ GF D+ YF +VF++ +G+TP E+ Sbjct: 198 ISLLKNSSLKNYEVAEAVGFSDAQYFSQVFKKIYGITPNEWK 239 >UniRef50_A9U743 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U743_PHYPA Length = 244 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 6/143 (4%) Query: 144 SRSPLEQNIIQPLVLSLLHLC-----RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPL 198 +R+ LE + + S + C RS + G G + W+ ++Y++ Sbjct: 99 ARARLETQLRACMSFSDMEDCFVEAFRSALEKVYGLRSEMGGKAVEIVKRWIAEHYSEHA 158 Query: 199 TRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY-HLSIHEVAQRCG 257 ++A +TP++LSKLF Q + EY+ VR+ A+ +L+ ++ +H++ G Sbjct: 159 ELNTLAAMVYLTPSYLSKLFKQETGLTLTEYITDVRLKNAKRLLRTEPNMKVHQIGAEVG 218 Query: 258 FPDSDYFCRVFRRQFGLTPGEYS 280 + D YF ++F++ G+TP EY Sbjct: 219 YADPAYFNKLFKKVVGVTPNEYK 241 >UniRef50_C0CWR9 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWR9_9CLOT Length = 256 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 58/95 (61%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +VQ NY + L+ VA + +I+ ++L+KLF + F+EY+ VRM +A +++ ++ Sbjct: 161 EYVQANYGRELSIRDVASYLSISESYLAKLFKVELKITFLEYLTRVRMRRAMELMRDKNM 220 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 I+EVA+R G+ D +F F++ G+ P E+ R Sbjct: 221 PIYEVAERVGYRDYRHFSATFKKLAGVGPKEFQMR 255 >UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN80_9FIRM Length = 285 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 55/99 (55%) Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 ++ +V+ + + ++ +A N+ ++LS LF M Y++ RM +A+ +L+ Sbjct: 173 NVMTYVRHHLHEHMSTAEIAATMNLNRSYLSSLFRSQTGMTLRSYIQLCRMTRAKYLLES 232 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 HLSI +A+ CG+ SD R FR+ +G++P +Y F Sbjct: 233 THLSIASIAESCGYEKSDSLNRTFRKTYGISPADYRKSF 271 >UniRef50_C6J5Z3 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5Z3_9BACL Length = 524 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%) Query: 174 NSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 Q + L I +V+ N Q +T + VA F+ TPN+L LF + F +Y+ + Sbjct: 413 KKQKQKRKLIQDIMAYVESNLEQKMTLKDVAARFDFTPNYLGFLFKEETGRHFSDYLNEL 472 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + + +L L I+E+A+R G+ + YF R F++ G+TPGEY Sbjct: 473 KTKRICELLTDPTLKIYEIAERMGYKNIIYFNRQFKQATGMTPGEY 518 >UniRef50_C3WDI9 Two component transcriptional regulator n=2 Tax=Fusobacterium RepID=C3WDI9_FUSMR Length = 269 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 64/115 (55%), Gaps = 1/115 (0%) Query: 168 VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFI 227 +N+ +Q + ++Y ++ +Q+ Y + ++ +A ++ +LS+ F + F+ Sbjct: 147 INICFEKAQTKNKYVYKAL-QKIQNRYNEKISIIEIADELGVSSGYLSRKFKEELEETFL 205 Query: 228 EYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 E + R+ KA +L K L ++E++++ GF D +FC VF++ G+ PGE+ + Sbjct: 206 EILNKYRVQKAMKLLVKEDLKMYEISEKVGFSDYKHFCTVFKKYLGMAPGEFIKK 260 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 60/97 (61%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I +++ N ++ LT E +A+ ++ PN+L + F +H + ++Y+ RM KA+ +L Sbjct: 181 IEAFIEANLSEALTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAKSLLGTT 240 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L+I E+A+ GFPD+++F + FR++ +P EY R Sbjct: 241 DLAIKEIAELVGFPDTNHFAKAFRKEASCSPTEYRHR 277 >UniRef50_UPI0001C35CCD helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35CCD Length = 287 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Query: 177 PRGDFLY-HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRM 235 P+ D L+ + I +W++ N+ Q +T +A+ F+ P++LS + + +Y+ VR+ Sbjct: 172 PKEDPLHIYRIQDWIRRNFQQAITVAQIAEIFHYNPDYLSSSYKKLTGTTLTQYINSVRI 231 Query: 236 AKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 A+ +L ++ E+A CGF D YF +VF++ +TP E+ F Sbjct: 232 ESAKNLLTSTDFTLKEIAFYCGFFDEKYFFKVFKQYEDMTPSEFKGAF 279 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 17/228 (7%) Query: 73 GEMLFIPARA--ANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA--RQIQLPSL 128 GE +F+ + + V KP ++VF + D + P ++ ++P+ Sbjct: 65 GEAIFVNSGELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAH 124 Query: 129 QR---GEGEAMLTAL-----THLSRSPLEQNIIQPLVLSLL----HLCRSVVNMPPGNSQ 176 R G G +L L H + + I+ L+ S+L L + V + P Sbjct: 125 LRREPGPGMELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEG 184 Query: 177 PRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMA 236 R + L ++ +++ NYA+P+ + +A+ ++ ++ + F + T IEY+ R+ Sbjct: 185 YRIERL-KTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQ 243 Query: 237 KARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +A L++ I EVA GF YF VFR++FG TP EY +R Q Sbjct: 244 QAASRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_C6CVC0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVC0_PAESJ Length = 539 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 56/93 (60%) Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 C ++ +YA+ L + +A +++ ++S+LF + M + EY+ VRM KA+ +L++ Sbjct: 440 CEYITLHYAEDLMLQDIADHVHLSRTYISELFKKETGMNYNEYLMQVRMEKAKELLKRQT 499 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L + + A G+ ++ YF ++F+ GL+P EY Sbjct: 500 LKVADAAALVGYSNTSYFIKLFKNYTGLSPSEY 532 >UniRef50_C0ZHT4 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHT4_BREBN Length = 498 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 5/132 (3%) Query: 146 SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTR-ESVA 204 SP+ I+ L+L + L + P S R D + +I +++ Y P R E VA Sbjct: 362 SPILYRIVVELLLFINQLL-DAAHHPIDES--RVDVVEQAI-RYIEGRYTDPALRLEEVA 417 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 ++ + +P++ S L AQ F + + +R+ +AR +L + LS+ EVA+RCGF +++YF Sbjct: 418 RYIDRSPSYFSTLLAQKQGSSFRQILTSLRVKEARRLLLETSLSVQEVAERCGFINANYF 477 Query: 265 CRVFRRQFGLTP 276 ++F+ + G TP Sbjct: 478 SKIFKEKTGTTP 489 >UniRef50_C7PS75 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PS75_CHIPD Length = 324 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 58/94 (61%) Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 ++ N+ +P+T + +A+ N++ + + F Q T +EY++ VR+ A+ +L+ + I Sbjct: 228 IEKNFGRPITIDQLARHCNMSERNFIRRFEQATTNTPLEYIQRVRVEAAKKMLEGKNEGI 287 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 ++A +CG+ D+DYF ++F+R +TP Y ++ Sbjct: 288 EQIASKCGYEDTDYFRKIFKRYVAMTPRAYQEKY 321 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 3/128 (2%) Query: 156 LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 L LSLL + PG + L +++ NYA LT + VA F++ S Sbjct: 147 LFLSLLQEIFTAACGQPGQENSK---LIEEAMGYIRLNYADELTVQKVADEFSVERRQFS 203 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 LF +H M I Y+ R++KA+ +L S+ +VA+ G+ DS YF + F++ G++ Sbjct: 204 YLFKRHTGMSPIHYLIECRISKAKELLGSPGCSVKQVAEWVGYTDSLYFSKAFKKYTGVS 263 Query: 276 PGEYSARF 283 P EY F Sbjct: 264 PSEYREGF 271 >UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AG99_BACPU Length = 302 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 57/94 (60%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +++ Y PLT + +A+ ++ P S F ++ + I+YV RM +AR IL+ ++ Sbjct: 209 YIRGQYMNPLTLQDLAELCDMNPKSFSYFFHKYTGLHPIDYVIQYRMERAREILKAGNIP 268 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 I +V+ G+P+ YF R+F+++FG+ P Y+A+ Sbjct: 269 IRDVSMTVGYPNPLYFSRLFKKKFGVPPSAYTAK 302 >UniRef50_A9KL59 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KL59_CLOPH Length = 259 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 55/99 (55%) Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 F+ + ++ +NY Q + VA+ ++ HLSKL +H F E + VR+ KA+ Sbjct: 154 FIVKNALQYIDENYQQKIMLSEVAEHIYVSQWHLSKLLHRHTGQNFSEILNNVRIEKAKE 213 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +L L I EVA++ GF D +F RVF++ G++ E+ Sbjct: 214 LLNNPALRIGEVAEKVGFVDMAHFSRVFKKIVGISANEF 252 >UniRef50_A6TTZ3 Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTZ3_ALKMQ Length = 245 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 57/103 (55%) Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 D + +++DNY++ + + VA ++P + SK F + M F Y+ R+ KA+ Sbjct: 139 DHVIKGAKEYIEDNYSEKIQLKDVANHVGLSPTYFSKFFKRKTQMNFSIYLNMARIEKAK 198 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 ++++ L+++E++ R G+ D YF VF++ TP +Y R Sbjct: 199 ELMRETTLTLNEISYRVGYEDLSYFSIVFQKYEASTPSDYRRR 241 >UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CLV0_9BACI Length = 525 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 56/98 (57%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I ++Q NY + + + +A F ++ ++S+ F Q +Y+ +RM KA+ +L+ Sbjct: 424 IEEYLQKNYQEDINLQEIADRFYLSREYISRKFKQDYDATITDYLTSIRMEKAKNLLKNP 483 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +L I+EVA G+ + YF +VF++ G+TP EY + Sbjct: 484 YLKIYEVAYGVGYQNEKYFSKVFKKHEGVTPNEYRQSY 521 >UniRef50_UPI00017895AE two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017895AE Length = 353 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 1/92 (1%) Query: 189 WVQDNYA-QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 ++++NYA + L+ + VA ++ +LS+ F M F++Y+ VRM KAR +L + L Sbjct: 252 FIEENYAMEDLSLQEVADSVGMSVTYLSRTFKSETNMNFVKYLVQVRMEKARELLAESEL 311 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 S E A R GF D +F + F++ GLTP Y Sbjct: 312 SAQEAAYRVGFSDYVHFSKTFKKFHGLTPSAY 343 >UniRef50_UPI0001C34E2F two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E2F Length = 583 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 5/131 (3%) Query: 157 VLSLLHLCRSVVN---MPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 + S + C ++N P G+ RG+ + I +++N ++R +A+ N+ P++ Sbjct: 448 MCSWIRRCMELMNRLSFPEGSG--RGEEMAGRIKGLIKENLKSGISRREIAEKLNLNPDY 505 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 +++LF M EY RM +A +L+ L++ VA G+ + +F R+FR++ G Sbjct: 506 VNRLFKSETGMTVKEYAIKKRMKQAEHLLKHSDLAVSAVAAEVGYDNFSHFIRMFRKETG 565 Query: 274 LTPGEYSARFQ 284 TP +Y +F+ Sbjct: 566 YTPKQYRKKFR 576 >UniRef50_UPI0001851370 two component AraC family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001851370 Length = 253 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 16/161 (9%) Query: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHS-------- 185 E M A+ H S L ++P+ LLH + QP+G+ + Sbjct: 88 EYMRKAVQHGSFDYL----LKPIDPDLLHEVLTKAVSAVQLQQPKGEVVAEDYKDQTITI 143 Query: 186 ----ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 + ++++ Y + + + +A F I+ ++S+ F +H + +Y+ +RM KA + Sbjct: 144 TMRKVEEYLKEYYHEDIKLQDIADTFYISREYISRKFKEHFHLTITDYLVDLRMKKAMEL 203 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L + +L ++E+A++ G+ D YF +VF++ G+TP +Y + Sbjct: 204 LDRTNLKVYEIAEKVGYVDDKYFRKVFKKFAGVTPNDYRQK 244 >UniRef50_B8I425 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I425_CLOCE Length = 538 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 57/92 (61%) Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++Q++Y + +T VA+ ++ ++S++F + F++Y+ VR+ KA+ +L+ Sbjct: 442 DYIQEHYNEQVTLNEVAENIYVSTFYISRMFKKELGKSFVDYLNDVRIDKAKELLKDVRY 501 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +EVA++ G D YF ++F++ G+TP EY Sbjct: 502 KTYEVAEKVGISDPHYFSKLFKKYSGMTPSEY 533 >UniRef50_C4G6T3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G6T3_ABIDE Length = 534 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 61/94 (64%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I +++ + Y++ LT +SVA F+++ ++S++ ++ F++ + RM AR ++ + Sbjct: 437 ILDYLNEYYSEDLTLDSVADKFHMSKTYISRILKKYTNQSFLQLLISRRMDIARKMIAED 496 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 ++E+A++ G+ D YF +VF++++G+TP EY Sbjct: 497 KFKLYEIAEKVGYNDFSYFIQVFKKKYGVTPNEY 530 >UniRef50_C0AE24 AraC-type DNA-binding domain-containing protein-like protein (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AE24_9BACT Length = 382 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 50/91 (54%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 IC V ++ L+RE +A F I+ +HL++LF H F E+V R A +L++ Sbjct: 275 ICAHVTEHLHGDLSRERMAARFGISEDHLTRLFRLHARCGFSEFVNAERFRLAENLLRQG 334 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 S+ EV CGF S YF + FR Q G+TP Sbjct: 335 RFSVKEVGAACGFNSSAYFVKRFREQHGVTP 365 >UniRef50_UPI0001C360A5 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C360A5 Length = 402 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 1/110 (0%) Query: 176 QPRGDFLYHSICNWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 R D++ I ++VQ +Y ++ E++A N+ P ++S LF + + F +Y+ R Sbjct: 292 DKRADYVGKYIKDYVQHHYMDSTVSIETIASMLNLVPTYVSTLFKKEAKVSFSQYLSDYR 351 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + +A+ +L+ + ++A GF + F RVF+++ G+TP EY Q Sbjct: 352 IEQAKYLLEHTDKKVKDIASETGFGTYNNFTRVFKKKLGVTPIEYKNHKQ 401 >UniRef50_C6CTB8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTB8_PAESJ Length = 530 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 61/107 (57%) Query: 173 GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRW 232 G ++ D + S+ +V+ +Y + L+ + V+ + I PN+ SK F Q + + +YV Sbjct: 422 GGAERSCDDIIDSVQQYVRQHYNEELSLQWVSDKYFIHPNYFSKRFKQIVGISYNDYVTR 481 Query: 233 VRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 VR+ +++ +L+ L I ++Q G+ D YFC VF++ G++P Y Sbjct: 482 VRIERSKELLKTTTLKIARISQLVGYEDQGYFCSVFKKVTGVSPSAY 528 >UniRef50_Q9KFJ6 Transcriptional regulator (AraC/XylS family) n=2 Tax=Bacillus RepID=Q9KFJ6_BACHD Length = 769 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 57/94 (60%) Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I + +Q+ + LT ES+A+ + PN+LS +F + + F EY+ R+A A+ L + Sbjct: 670 IIHIIQNEFDMELTLESIAERLHYNPNYLSSIFRKETNISFSEYLSSYRLAMAKKWLLET 729 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + I E+A+R + +S F R F+++ G+TPG+Y Sbjct: 730 SMPIREIAERLCYGNSQNFIRSFKKKEGMTPGKY 763 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 70/125 (56%), Gaps = 2/125 (1%) Query: 157 VLSLLHLCRSVVNMPPGN--SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHL 214 ++ +L+L SV+ + P G+ + +++Q++Y+ P+ E ++ + I ++ Sbjct: 143 LMGMLYLALSVIANAQKDKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSYF 202 Query: 215 SKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGL 274 S LF Q+ M ++Y++ R+ KA+ +L LS+ +A CG+ ++ F ++FR+ GL Sbjct: 203 SDLFKQYTGMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTGL 262 Query: 275 TPGEY 279 +P Y Sbjct: 263 SPNAY 267 >UniRef50_C5RM76 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RM76_CLOCL Length = 364 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 56/95 (58%) Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 IC ++ +N + L +++A+ F I +LS FA + F +YV VR+A+AR +L Sbjct: 265 EICEYILNNPSADLKLKAIAEKFYINNTYLSNNFATKTGVGFNDYVTMVRLARARYLLVN 324 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L +E+ + G+ D +YF ++F++++G P EY Sbjct: 325 TKLKNYEIGSQIGYHDINYFSKLFKKEYGKNPSEY 359 >UniRef50_C9XJN0 AraC-family transcriptional regulator n=8 Tax=Clostridium RepID=C9XJN0_CLODC Length = 551 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 176 QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRM 235 + +G+ L +I +++ Y + + S++ F I+PN+LS +F + + EY+ +R+ Sbjct: 440 KDKGN-LIENINEYIKKYYKENINLNSISDVFFISPNYLSSIFNERNKVSITEYINLLRI 498 Query: 236 AKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +++ L +SI ++ ++ GF +S YF ++F++ +TP EY Sbjct: 499 EESKKYLLDRSMSISDICKKVGFNNSSYFSQIFKKFNSITPNEY 542 >UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH5_9FIRM Length = 302 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 6/131 (4%) Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFN 208 E+NI+Q C + + + I ++++ Y +P+T +S+ N Sbjct: 173 EKNILQQF------FCEVALQNKKAGQEDMNTRRLNKIIHYIKKYYMEPITLDSLCSTVN 226 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 ++P+++ KLF + ++ + YV VR+ AR +L + LS+ ++A + GF DS YF + F Sbjct: 227 LSPSYIIKLFNHYTSLSPMAYVNRVRIEAAREMLAETPLSVSDIAAQTGFKDSFYFSKKF 286 Query: 269 RRQFGLTPGEY 279 + G+TP +Y Sbjct: 287 KAVTGITPRQY 297 >UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2H9_9BACL Length = 535 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 10/168 (5%) Query: 116 LLHPARQI-QLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGN 174 L+H R++ +L L R + E + L R P+ + +++SL+ RS ++ Sbjct: 372 LIHLLREMRELHMLPREQEEGLWKRL----REPMSLKELLSIIVSLIEHARSSLS----- 422 Query: 175 SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 ++ + L S N++Q++ + E +A + I+ ++ LF H F+EY+ R Sbjct: 423 AKKSTELLMMSAQNYIQNHLGRDFGIEDIADYLGISSSYFCLLFKNHFGETFVEYLTKQR 482 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 M A+ +L+ SI ++ G+ + YF +VF++ G+TP +Y + Sbjct: 483 MEMAKCLLRTSERSIAQIGSSIGYQERRYFTKVFQKYTGMTPSDYRQK 530 >UniRef50_A5ZVI7 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A5ZVI7_9FIRM Length = 549 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 1/118 (0%) Query: 163 LCRSVVNMPPGNSQPRGDFLYHSICNWVQDNY-AQPLTRESVAQFFNITPNHLSKLFAQH 221 + + + NS + + + +++ +Y + ++ +VA N++ NH S LF+Q+ Sbjct: 424 MISQAIEIRDQNSGNKNRSILKTAVDFIDSHYMDEEISLNTVANVANVSSNHFSALFSQN 483 Query: 222 GTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 FIEY+ +RM KA+ +L+ + E+A G+ D+ YF +F++ G+TP +Y Sbjct: 484 MGQTFIEYLTTLRMNKAKELLRCTGMRSSEIAGEIGYKDAHYFSYLFKKTQGMTPSDY 541 >UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J070_9BACL Length = 523 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 55/96 (57%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +V + + ++ E A++ N++P + SKLF F +Y+ +R+ +A+ ++ LS Sbjct: 426 FVNQRFKEEISMEQTAEYVNLSPYYFSKLFKLQTGENFSDYLTRLRIEEAKRLIAGRSLS 485 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + E+ G+ D +YF RVF++ G+TP EY + + Sbjct: 486 LKEICYEVGYKDPNYFSRVFKKSVGITPSEYRQQIE 521 >UniRef50_D1T9I8 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T9I8_9BURK Length = 280 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 17/159 (10%) Query: 135 AMLTALTHLSRSPLEQN-----IIQPLVLSLLHLCRSVV--NMPPGNSQ---PRGDFLYH 184 A L+ + L R EQ+ ++ LVL LL C G S+ R + L H Sbjct: 120 APLSFMRRLVRECREQDSATSLAVEGLVLELLAACERAAPRTATVGGSRRWLARVEALLH 179 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 D + LT + +A ++ +HL++ F +H EYVR +R+ A L Sbjct: 180 -------DRFRDALTLDEIASDSHVCADHLAREFRKHYGCTVGEYVRQLRLDFACAQLTS 232 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 S+ +AQ GF D +F RVFRR+ GLTPG Y A+ Sbjct: 233 GRHSLKAIAQDAGFADQSHFTRVFRRRMGLTPGAYRAQL 271 >UniRef50_C6PN49 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PN49_9CLOT Length = 401 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 1/92 (1%) Query: 189 WVQDNY-AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 ++ NY L + VA+ FN++ ++LSKL Q + F +Y+ +R+ KA ++ + Sbjct: 305 YINTNYNVNDLNLQGVAEQFNVSSSYLSKLIKQEIGISFSDYLTNIRIKKAICFMEDPKM 364 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 I+EVA+ G+ + YFC+ F++ G++P EY Sbjct: 365 KIYEVAEAVGYSNQHYFCKAFKKVIGVSPTEY 396 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 19/284 (6%) Query: 14 ADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQ--RLV 71 D F + R+W+ Q + ++I+L E +EA Q ++ Sbjct: 26 VDSFETISFQKDSTIRIWYNEQNQNYDTHW----HNAIEIILPVENHYDVEASGQAYHIL 81 Query: 72 EGEMLFIPA---RAANLPVNNKPVMLLSLVFAPTWL-GLSFYDSRTTSLLHPARQIQLPS 127 E+L IP+ A P + K + L V + + G + S TS LH + P Sbjct: 82 PSEILIIPSGEMHALYAPESGKRFIFLFDVSSIAQMKGYTSIQSLMTSCLHITKTT-YPQ 140 Query: 128 LQRGEGEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLCRSVVN----MPPGNSQPRGDF 181 + + ++ S E I L+ + + R+ +N P S + ++ Sbjct: 141 IYNDVYQLLVQMRNEYFSSNEFRELAIYSHLINLFVSIGRNRINNVDLFPNTRSHKQKEY 200 Query: 182 L--YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 L ++ + +++ +Y + LT +++A F + H ++LF Q+ F +Y+ + R+ A Sbjct: 201 LQKFNEVLDYIDSHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFYDYLIYRRIKAAE 260 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +L LSI E+A + GF F R+F+++ G TP EY + + Sbjct: 261 ELLANPELSITEIALQSGFSSISTFNRIFKQKKGCTPSEYRSLY 304 >UniRef50_C0D3A6 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3A6_9CLOT Length = 505 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 51/90 (56%) Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 + Y L+ E +A ++TP +LS LF + ++F Y R+ A+ +L + I Sbjct: 411 IDQGYKGELSLEEIAGSLSVTPEYLSTLFIRELGIKFTTYCTQRRIECAKHLLADPNRKI 470 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +EVA G+ D YFC+VF++ GL+PGEY Sbjct: 471 YEVAGESGYGDVKYFCKVFKKYTGLSPGEY 500 >UniRef50_C4Z2W7 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z2W7_EUBE2 Length = 273 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 22/153 (14%) Query: 143 LSRSPLEQNIIQPLVLSLLHL-----------CR-----SVVNMPPGNSQPRGDFLYHSI 186 + + E N + L LS +H C+ + M GN L + Sbjct: 123 IQKISYEHNGVDSLSLSFIHSYFHELILFILRCQMYEDNVITKMDTGNE------LIQKV 176 Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 ++ +NY +T + A+ FN++ + LSK F RF EY+ VR A +L Sbjct: 177 IEYIIENYHNDITMAATAELFNMSESSLSKKFKAFTGFRFREYLINVRTHAAADLLVNTS 236 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 LSI E+A +CGF DS+ F++ G PG Y Sbjct: 237 LSITEIADKCGFADSNTMGGTFKKIMGEAPGSY 269 >UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GEN0_LACF3 Length = 278 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 67/116 (57%), Gaps = 7/116 (6%) Query: 166 SVVNMPPGNSQPRGDFLYHSICNWVQ--DNYAQPLTRESVAQFFNITPNHLSKLFAQHGT 223 +V+N+ NS+ H + +Q ++ +T ES+A N+ ++L+ LF Sbjct: 158 TVINIQQANSEKN-----HYVTQAIQYISHHLSKVTVESLAHAVNLNRSYLTSLFKHDLD 212 Query: 224 MRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + EY++ R+ KAR +L+ +SI +VA++CG+ ++ F RVF+R +G++P +Y Sbjct: 213 LTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFKRTYGISPRQY 268 >UniRef50_UPI0001C363ED two component AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C363ED Length = 487 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 1/105 (0%) Query: 176 QPRGDFLYHSICNWVQDNYAQPLTR-ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 Q + L SI ++ Y L E+ A+ F P ++SK+F + F +Y+ R Sbjct: 378 QKKTGLLVTSIREYLDREYCSNLVSLEATAEHFRKNPAYISKVFKKETGFNFSDYITQKR 437 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 MA ++++L+ L I+E+A+ G+ D+ F +VF++ G++P EY Sbjct: 438 MAHSKLLLRDMSLKIYEIAEMTGYADASNFIKVFKKHCGMSPNEY 482 >UniRef50_A5ZA57 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZA57_9FIRM Length = 516 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 188 NWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 ++V N P L+ + VA I ++LS+ F + + FIEY+ R+ ++ +L++ Sbjct: 422 DYVNRNLYNPELSLKKVASDLYINDSYLSREFKKTYGVSFIEYISQKRIEASKKLLKETE 481 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 L ++EVA++ GF DS YFC F++Q G T EY A Sbjct: 482 LKVYEVAEKIGFKDSHYFCICFKKQTGQTVKEYRA 516 >UniRef50_Q46N37 Transcriptional regulator, AraC family n=2 Tax=Cupriavidus RepID=Q46N37_RALEJ Length = 322 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 54/100 (54%) Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 D + V + +P T ES+AQ N++ L++ F Q G + +E V +RM +A Sbjct: 208 DTRMAKAVDAVVGSPERPWTIESLAQSANVSRATLARRFTQLGGITPLELVTTLRMERAA 267 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +LQ+ +LS VA+RCG+ F R F QFG+ PG Y Sbjct: 268 RLLQQDNLSAAAVAERCGYASQAAFGRAFSGQFGVGPGAY 307 >UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU32_9BACL Length = 334 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Query: 170 MPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEY 229 + P S PR + ++ +++Q + A L+ +A + +++ HLS LF + M + Sbjct: 217 LEPSKS-PRSRIIQAAV-DYIQSHLADELSLTRIAVYCSVSTYHLSHLFRKEMGMTLTAF 274 Query: 230 VRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 ++ +R+ KAR +L L++ E+A + GF D +YF + FR +GL P EY Sbjct: 275 IKSLRLKKARELLLNSSLTVSEIAYQVGFSDPNYFSKTFRVTYGLPPSEY 324 >UniRef50_A6WBM1 AraC-type transcriptional regulator domain protein n=5 Tax=Actinomycetales RepID=A6WBM1_KINRD Length = 330 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 44/269 (16%) Query: 45 CIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN--------KPVMLLS 96 +D L ++ +GE +L+ ++ R G+ + + +LPV +P + Sbjct: 70 SMDGAVLAVIAQGEKTLVLDDRELRYGAGQYVVA---SLDLPVTGQFTGASEAEPALGFG 126 Query: 97 LVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE-----------GEAMLTALTHLSR 145 L P + LLHPA + +LP RG G +L A+ + R Sbjct: 127 LALKPALI--------AELLLHPAAR-ELPGTGRGAAAPFALTIGDAGSDLLDAVVRMLR 177 Query: 146 ---SPLEQNIIQPLV-LSLLHLCRSVVNMPPGNSQPRGDFLYHSICN------WVQDNYA 195 P ++ ++ PL+ +L L ++ P G + + S+ N W++++YA Sbjct: 178 LLERPRDRVVLAPLIEREILWL---LITGPHGEAVRQLGLADSSLSNVARAVRWLREHYA 234 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 QPL + +AQ ++P+ + FA +M I++ + +R+ +AR+ L + Sbjct: 235 QPLRVQELAQVAAMSPSAFHRAFAAVTSMSPIQFQKRIRLQQARLRLLTDPADVAGAGHA 294 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 G+ + F R +RR FGL PG+ + R + Sbjct: 295 VGYESASQFSREYRRLFGLPPGQDATRLR 323 >UniRef50_B4AK94 YbbB n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AK94_BACPU Length = 540 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 55/91 (60%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++ + +PL+ S++Q I+ NH S+LF +H + +Y+ RMA+A+ ++ K + Sbjct: 183 YIDQHSEEPLSLTSLSQMAGISANHYSELFKKHFNVSVTDYITKKRMARAKQLMAKGNAK 242 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + ++A G+ D YF R+F+++ G+TP Y Sbjct: 243 LKDIALEIGYQDPYYFSRIFKKKTGMTPSTY 273 >UniRef50_UPI000178A86D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A86D Length = 747 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 60/93 (64%), Gaps = 1/93 (1%) Query: 188 NWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 +++++++ P L+ + ++ F I+ + S LF M+F++++ +RM +A +L + Sbjct: 640 HYIEEHFDDPNLSLKHLSDRFQISGKYASYLFKMEYDMKFVDFLVQLRMKRAEELLAQTD 699 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 LSI E+A++ G+ +S F RVF+R G+TPG+Y Sbjct: 700 LSIQEIAEKIGYANSITFGRVFKRTSGVTPGDY 732 >UniRef50_Q2B7S0 Transcriptional regulator (AraC/XylS family) protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B7S0_9BACI Length = 749 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 11/150 (7%) Query: 135 AMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNY 194 AM + + L Q +IQP+++S N++ + I +Q + Sbjct: 610 AMHAYYPQIIKDMLYQQLIQPVIIS-----------TQSNTEQGFKNISDKIVYIIQSEF 658 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 Q ++ + +A + PN+LS +F + F++Y+ R+ A+M L++ ++I E+A+ Sbjct: 659 DQEISLDIIADRLHYNPNYLSNVFKKEYGENFVDYLMNYRLQMAQMWLKETDMTIKEIAE 718 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + + +S F R F+++ G TPG+Y ++ Sbjct: 719 KLQYRNSQNFIRFFKKKVGKTPGDYRKEYR 748 >UniRef50_C6CT83 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT83_PAESJ Length = 472 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 69/117 (58%), Gaps = 5/117 (4%) Query: 164 CRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGT 223 CR PP ++ R ++ I +V D++ + L+ + +++ F + P+++S+LF + Sbjct: 355 CRGGEAHPP-ETKNR---TFNQILQYVTDHFREELSLQGLSEQFFMNPSYISQLFKKEVG 410 Query: 224 MRFIEYVRWVRMAKA-RMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 F+ Y+ +R+A A +++ + SIHE+A++ G+ D YF R+F++ G TP +Y Sbjct: 411 ETFVGYISQLRIAHACKLLDENDDYSIHEIAEKIGYNDYFYFARLFKKMTGKTPTQY 467 >UniRef50_A3ZXN6 Probable transcriptional regulator n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZXN6_9PLAN Length = 318 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 9/140 (6%) Query: 144 SRSPLEQNIIQPL---VLSLLHLC--RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPL 198 SRSP + I+P +L L L R + + P N + R D + +I ++ ++ Q L Sbjct: 174 SRSPEKSLTIEPFFDAILDRLFLIAGRKLPEIKP-NDRLRPDAVTRAI-EFIDAHFHQEL 231 Query: 199 TRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ--KYHLSIHEVAQRC 256 + +AQ ++ H S+LF Q +Y+ +R+ KA+ IL+ L++ ++AQRC Sbjct: 232 RLDEIAQVAGVSRCHFSRLFRQTMGQSLKQYLVEIRLNKAQEILEFGASDLTVGQIAQRC 291 Query: 257 GFPDSDYFCRVFRRQFGLTP 276 GF D + R FRR++G+TP Sbjct: 292 GFCDRQHLIREFRRKYGVTP 311 >UniRef50_A0AHP4 Complete genome n=16 Tax=Listeria RepID=A0AHP4_LISW6 Length = 294 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 53/91 (58%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +++ N +P++ + VA ++ + SKLF + + FI YV +M A+ +L+ S Sbjct: 199 YIEKNLNRPISLDEVASHVYLSSYYFSKLFKKEMNVNFINYVNQKKMLLAKDMLKNPRWS 258 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 I VA+ GF + YFC+VFR++F +TP Y Sbjct: 259 IDNVARNLGFTQTSYFCKVFRKEFDVTPKGY 289 >UniRef50_A8RM75 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8RM75_9CLOT Length = 253 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 55/94 (58%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +++++Y + +T +VA F I+ +LS++F + F Y+ + RM A +L+ + Sbjct: 158 YIREHYREDITISTVASFLEISEGYLSRVFKKETDYTFTNYLAYYRMQMAMNLLKDCRVK 217 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 ++EVA + G+ D+ YF F++ G++P EY R Sbjct: 218 VYEVADQVGYSDTAYFSAQFKKILGVSPSEYQDR 251 >UniRef50_UPI000197B404 hypothetical protein BACCOPRO_02224 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B404 Length = 270 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 53/91 (58%) Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++ NY + + +A N++PN+ K+F Q + Y+ +RM A +L+ ++ Sbjct: 171 YMHANYKDTIHLKELACMCNVSPNYFHKIFKQTFKITPTNYIILLRMNSALQLLKDNGVT 230 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 I E+A GF D+ +FC+ F++ +G+TPGEY Sbjct: 231 IKEIAFELGFTDNAHFCKTFKKYYGITPGEY 261 >UniRef50_A4XHB8 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XHB8_CALS8 Length = 546 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Query: 175 SQPRGDFLYHSICNWVQDNYA-QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 +Q + L + +++ NY+ ++ +++ F ++P++LS+LF + +++ Sbjct: 428 NQSKMGSLIKKVIEYIKANYSYNEISLSEISEKFFVSPSYLSRLFKKETGKNLSDFINEY 487 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 R+ KA+ +L L +EVA + G PD YF R+F+R G +P EY Sbjct: 488 RIEKAKELLATTDLKTYEVADKVGIPDPHYFSRIFKRYTGYSPSEYK 534 >UniRef50_C7H4C8 Two Component Transcriptional Regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4C8_9FIRM Length = 416 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 56/96 (58%) Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 + N+V N A+PLT +S+A I+P++LS LF Q I+Y+ R+ +A +L Sbjct: 314 QKVMNYVNLNVAEPLTLKSLAAMCFISPSYLSALFKQETGSTLIDYINTQRVNRAAQLLV 373 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + + +I VA+ G D +YF ++F++ G+TP Y Sbjct: 374 QNNHTIAAVAEEVGILDVNYFTKIFKKTLGVTPTRY 409 >UniRef50_D2LWA9 Two component transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LWA9_BACS4 Length = 525 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 63/102 (61%), Gaps = 2/102 (1%) Query: 178 RGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAK 237 +GD + + +V+ NY + ++ +S+A+ F + P ++ +LF + M F E+V +RM + Sbjct: 419 KGDI--YKVKAYVESNYHKNISLKSIARQFYMNPVYMGQLFKKTFGMYFKEFVLKLRMDE 476 Query: 238 ARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 A+ +L++ + ++E+A+ GF +DYF F ++ +TP EY Sbjct: 477 AKKLLRQTDMLVYEIAENVGFGSTDYFVTQFEKKCKMTPTEY 518 >UniRef50_C9A5A5 Predicted protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A5A5_ENTCA Length = 794 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/233 (23%), Positives = 108/233 (46%), Gaps = 8/233 (3%) Query: 54 VLRGEYGNLLEAKQQRLVEGEMLFIPARAA-NLPVNNKPVMLLSLVFAPTWLGLSFYDSR 112 +L+G+ K++ L ++ F+ A + +L +L L F T L S D Sbjct: 35 LLKGKLQLQFTDKKETLAAKDLFFMKANTSVSLKSTTNETYVL-LYFVSTSLLNSVLD-- 91 Query: 113 TTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRS--PLEQNIIQPLVLSLLHLCRSVVNM 170 T ++Q S Q E+ L ++L S L+ +++ L HL ++ + Sbjct: 92 MTRYTFKTEKVQPYSQQEKINESSLQIASYLKESGGNLDFHLLALSANFLDHLSKTALIY 151 Query: 171 PPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYV 230 P N D + I ++++ N + +T + +A +FN++ + S+ F + + F EY+ Sbjct: 152 QPLNKAT--DTRMNEILHYLETNMTKIITLDEIAAYFNVSSAYFSRFFKKQVGINFTEYL 209 Query: 231 RWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +R+ KA ++ I +A + GF + + F R F+ ++G TP +Y +F Sbjct: 210 TNLRLEKAAAAIRSSSEQISVIADQTGFVNINGFNRKFKERYGYTPRDYRKQF 262 >UniRef50_C0AAS5 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AAS5_9BACT Length = 371 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 10/141 (7%) Query: 153 IQPLVLSLLHLCRSVV----------NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 I ++L L LC V MP +S RG+ + ++ +N+ + LT + Sbjct: 219 ITSMMLGLSVLCARAVMRTGATGERREMPAQSSVTRGELIVRRTKEFLFENHRRSLTLDE 278 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 VA+ ++P H+S+ F Q +Y+R+VR+ A+ +L ++ +V + GF Sbjct: 279 VARHLRLSPGHVSRAFRQMTGKTVFDYLRFVRVDIAQQLLADSSRTVADVGRSVGFSTPT 338 Query: 263 YFCRVFRRQFGLTPGEYSARF 283 F R F+R+ G+TP Y R Sbjct: 339 LFGRAFKRETGVTPQTYRQRI 359 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77396 Uncharacterized HTH-type transcriptional regulat... 410 e-113 UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=En... 379 e-104 UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein ... 270 4e-71 UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=T... 266 8e-70 UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=E... 258 2e-67 UniRef50_P32677 Uncharacterized HTH-type transcriptional regulat... 253 5e-66 UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae Rep... 249 8e-65 UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Gr... 243 5e-63 UniRef50_C8QGZ7 Transcriptional regulator, AraC family n=1 Tax=P... 227 5e-58 UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=K... 223 4e-57 UniRef50_Q7NVM9 Probable transcriptional regulator, AraC family ... 219 7e-56 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 216 8e-55 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 203 4e-51 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 202 1e-50 UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC fami... 200 5e-50 UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16... 197 4e-49 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 196 6e-49 UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=V... 196 9e-49 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 195 1e-48 UniRef50_A7ML57 HTH-type transcriptional activator rhaR n=92 Tax... 195 2e-48 UniRef50_A7FN79 HTH-type transcriptional activator rhaR n=29 Tax... 194 2e-48 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 193 4e-48 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 192 1e-47 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 191 2e-47 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 190 6e-47 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 189 8e-47 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 188 2e-46 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 188 2e-46 UniRef50_UPI0001787DEA transcriptional regulator, AraC family n=... 186 7e-46 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 186 7e-46 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 184 3e-45 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 184 3e-45 UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=... 181 2e-44 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 181 2e-44 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 181 2e-44 UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi... 180 5e-44 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 180 6e-44 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 180 6e-44 UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=F... 180 7e-44 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 179 9e-44 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 179 9e-44 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 178 2e-43 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 178 2e-43 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 177 4e-43 UniRef50_UPI0001B9EC7D transcriptional regulator, AraC family n=... 177 4e-43 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 177 4e-43 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 175 1e-42 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 175 1e-42 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 175 2e-42 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 175 2e-42 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 173 4e-42 UniRef50_A8FAK6 AraC family transcriptional regulator n=2 Tax=Ba... 173 5e-42 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 173 5e-42 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 171 2e-41 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 171 2e-41 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 170 3e-41 UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=S... 170 4e-41 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 170 5e-41 UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostri... 170 6e-41 UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostri... 170 8e-41 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 169 9e-41 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 168 1e-40 UniRef50_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecali... 168 2e-40 UniRef50_A6DLX0 Transcriptional regulator n=1 Tax=Lentisphaera a... 168 2e-40 UniRef50_C4LFY1 Transcriptional regulator, AraC family n=1 Tax=T... 167 3e-40 UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostri... 167 3e-40 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 167 4e-40 UniRef50_C6D490 Two component transcriptional regulator, AraC fa... 166 5e-40 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 166 5e-40 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 166 6e-40 UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n... 166 6e-40 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 166 6e-40 UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pe... 166 6e-40 UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=M... 166 9e-40 UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 T... 165 2e-39 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 165 2e-39 UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=V... 165 2e-39 UniRef50_UPI0001C35C03 two component transcriptional regulator, ... 165 2e-39 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 164 3e-39 UniRef50_Q2RGN4 Two component transcriptional regulator, AraC fa... 164 3e-39 UniRef50_C6CRC2 Transcriptional regulator, AraC family n=1 Tax=P... 164 3e-39 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 164 3e-39 UniRef50_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostri... 164 4e-39 UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. ora... 164 4e-39 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 164 4e-39 UniRef50_UPI0001789626 transcriptional regulator, AraC family n=... 164 4e-39 UniRef50_C0A2N9 AraC-type DNA-binding domain-containing protein-... 164 4e-39 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 163 5e-39 UniRef50_UPI0001788A43 two component transcriptional regulator, ... 163 5e-39 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 163 5e-39 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 163 5e-39 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 163 6e-39 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 163 6e-39 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 163 8e-39 UniRef50_A4XFU2 Two component transcriptional regulator, AraC fa... 163 9e-39 UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicu... 162 1e-38 UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 T... 162 1e-38 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 162 1e-38 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 162 1e-38 UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Cl... 161 3e-38 UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Ther... 161 3e-38 UniRef50_D1N5H4 Transcriptional regulator, AraC family n=1 Tax=V... 161 3e-38 UniRef50_C9A5A5 Predicted protein n=1 Tax=Enterococcus casselifl... 161 3e-38 UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Ther... 160 4e-38 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 160 4e-38 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 160 5e-38 UniRef50_B0MA57 Putative uncharacterized protein n=1 Tax=Anaeros... 160 7e-38 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 160 7e-38 UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryante... 159 9e-38 UniRef50_A4XHB8 Two component transcriptional regulator, AraC fa... 159 1e-37 UniRef50_C7GGB1 Putative two-component response regulator n=1 Ta... 159 1e-37 UniRef50_C6IYL2 Two component transcriptional regulator n=1 Tax=... 159 1e-37 UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and... 158 1e-37 UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=... 158 2e-37 UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=M... 158 2e-37 UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1... 158 2e-37 UniRef50_C6CZ56 Two component transcriptional regulator, AraC fa... 158 3e-37 UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=... 158 3e-37 UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=V... 158 3e-37 UniRef50_UPI0001788F54 two component transcriptional regulator, ... 158 3e-37 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 158 3e-37 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 157 3e-37 UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax... 157 3e-37 UniRef50_C6JC58 Two component transcriptional regulator n=1 Tax=... 157 4e-37 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 157 4e-37 UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=... 157 4e-37 UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=... 157 4e-37 UniRef50_C4Z0X2 Two-component system, response regulator YesN n=... 157 4e-37 UniRef50_UPI0001C35ADD AraC family transcriptional regulator n=1... 157 4e-37 UniRef50_UPI000178A1A9 transcriptional regulator, AraC family n=... 157 5e-37 UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. ora... 156 5e-37 UniRef50_D1NA91 Transcriptional regulator, AraC family n=1 Tax=V... 156 6e-37 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 156 6e-37 UniRef50_B8I425 Two component transcriptional regulator, AraC fa... 156 7e-37 UniRef50_A9KQP4 Two component transcriptional regulator, AraC fa... 156 7e-37 UniRef50_B1YJP0 Two component transcriptional regulator, AraC fa... 156 7e-37 UniRef50_UPI0001C34DA4 positive regulator for rhaBAD operon n=1 ... 156 8e-37 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 156 8e-37 UniRef50_C6CT83 Two component transcriptional regulator, AraC fa... 156 9e-37 UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecali... 156 9e-37 UniRef50_A9KJM4 Two component transcriptional regulator, AraC fa... 156 9e-37 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 156 9e-37 Sequences not found previously or not previously below threshold: UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 177 4e-43 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 177 4e-43 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 176 8e-43 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 176 1e-42 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 175 2e-42 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 173 4e-42 UniRef50_C4LCV7 Transcriptional regulator, AraC family n=1 Tax=T... 173 5e-42 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 173 6e-42 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 173 7e-42 UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=V... 173 8e-42 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 172 1e-41 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 171 3e-41 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 170 5e-41 UniRef50_UPI000197C3B0 transcriptional regulator, AraC family pr... 170 6e-41 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 170 7e-41 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 169 1e-40 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 169 1e-40 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 169 1e-40 UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 T... 168 1e-40 UniRef50_C6DJR5 HTH-type transcriptional activator rhaR n=5 Tax=... 168 2e-40 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 168 2e-40 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 167 4e-40 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 167 4e-40 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 167 4e-40 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 166 5e-40 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 166 5e-40 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 166 5e-40 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 166 6e-40 UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Ta... 166 7e-40 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 166 9e-40 UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=A... 165 2e-39 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 165 2e-39 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 165 2e-39 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 165 2e-39 UniRef50_C0EHT5 Putative uncharacterized protein n=1 Tax=Clostri... 165 2e-39 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 164 3e-39 UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C... 164 3e-39 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 164 3e-39 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 164 3e-39 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 164 4e-39 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 164 4e-39 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 163 7e-39 UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Ta... 163 7e-39 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 163 7e-39 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 163 8e-39 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 163 9e-39 UniRef50_C6J3C3 Transcriptional regulator (Fragment) n=1 Tax=Pae... 163 9e-39 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 162 1e-38 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 162 1e-38 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 162 2e-38 UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=C... 162 2e-38 UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae Re... 161 2e-38 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 161 2e-38 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 161 2e-38 UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=C... 161 2e-38 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 161 2e-38 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 161 3e-38 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 161 3e-38 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 161 3e-38 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 161 3e-38 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 161 3e-38 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 161 3e-38 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 160 4e-38 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 160 4e-38 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 160 5e-38 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 160 5e-38 UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=P... 160 5e-38 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 160 6e-38 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 160 6e-38 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 160 7e-38 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 160 7e-38 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 160 8e-38 UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=V... 159 8e-38 UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=S... 159 8e-38 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 159 9e-38 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 159 9e-38 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 159 9e-38 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 159 1e-37 UniRef50_B1R1I5 Transcriptional regulator, AraC family n=2 Tax=C... 159 1e-37 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 158 1e-37 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 158 1e-37 UniRef50_UPI000178AA9D transcriptional regulator, AraC family n=... 158 1e-37 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 158 1e-37 UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 158 2e-37 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 158 2e-37 UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C... 158 2e-37 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 158 3e-37 UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n... 158 3e-37 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 157 4e-37 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 157 4e-37 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 157 4e-37 UniRef50_UPI0001789951 two component transcriptional regulator, ... 157 4e-37 UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=C... 157 4e-37 UniRef50_D1N6X4 Transcriptional regulator, AraC family n=1 Tax=V... 157 4e-37 UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostri... 157 5e-37 UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostri... 157 5e-37 UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus g... 156 5e-37 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 156 6e-37 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 156 7e-37 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 156 7e-37 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 156 7e-37 UniRef50_C0E8H9 Putative uncharacterized protein n=1 Tax=Clostri... 156 7e-37 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 156 8e-37 UniRef50_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax=... 156 8e-37 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 156 9e-37 >UniRef50_P77396 Uncharacterized HTH-type transcriptional regulator ypdC n=61 Tax=Enterobacteriaceae RepID=YPDC_ECOLI Length = 285 Score = 410 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG Sbjct: 1 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60 Query: 61 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA Sbjct: 61 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120 Query: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD Sbjct: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM Sbjct: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG Sbjct: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 >UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=D2THV7_CITRO Length = 284 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 232/284 (81%), Positives = 253/284 (89%) Query: 1 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60 MK PGLPADQQFFADLFSGLVLNPQ LGRVWFA+ +LP GSLC+D PRLDIVLRGEYG Sbjct: 1 MKQPGLPADQQFFADLFSGLVLNPQRLGRVWFATPGTALPGGSLCLDLPRLDIVLRGEYG 60 Query: 61 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120 N LE Q RLVEGEMLFIPARAANLP++ KPVMLLSLVFAP W GLSFYD+R+ SLL P Sbjct: 61 NQLEKSQHRLVEGEMLFIPARAANLPISEKPVMLLSLVFAPAWFGLSFYDTRSASLLRPL 120 Query: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 R+I+LP QRGEGEAMLTALTHLSRSP EQ IIQPLVLSLLHLCRSVVN PP +PR + Sbjct: 121 RRIELPHPQRGEGEAMLTALTHLSRSPQEQAIIQPLVLSLLHLCRSVVNTPPDIRRPRAE 180 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 FLYHSICNWVQDNYA+PL+RESVA FFNITPNHLS+LF +HGTM F++YVRWVRMAKARM Sbjct: 181 FLYHSICNWVQDNYARPLSRESVATFFNITPNHLSRLFTRHGTMSFVDYVRWVRMAKARM 240 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ILQKYHLS++EVAQRCG+ DSDYFCR+FRRQFGLTPGEY ARFQ Sbjct: 241 ILQKYHLSVNEVAQRCGYEDSDYFCRLFRRQFGLTPGEYRARFQ 284 >UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein n=58 Tax=Gammaproteobacteria RepID=Q7MFY0_VIBVY Length = 301 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 101/282 (35%), Positives = 163/282 (57%), Gaps = 10/282 (3%) Query: 10 QQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQR 69 + F DL S ++ + +WFA + P S ++FPRL++VL GEY N +E+ ++ Sbjct: 22 EMMFDDLISSVLNERESFHHIWFAGDFHTPPEFSYQVNFPRLELVLDGEYINEMESHDRK 81 Query: 70 L-----VEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ 124 + G+ +FIP+ N P + +LS++F LGLS R + IQ Sbjct: 82 VSKIVAKAGDAIFIPSNCWNKPNWDTDCSVLSMLFGRRQLGLSLVSKRKGEV--NFYDIQ 139 Query: 125 LPSLQRGEG---EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF 181 S+Q G + +L AL+ L+R ++ + + L+ +LL ++++N P S R Sbjct: 140 KHSIQTRSGFAIDNILEALSSLARENHKKPMDELLLQALLQYAKTMLNAPVEQSHNRVQD 199 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 LY IC ++Q+N+ +P+TRES+A F+I+ NHLS+LF Q G M +Y+ WVR+ +A+ + Sbjct: 200 LYQGICIYIQENFHRPITRESIASRFSISANHLSRLFRQQGHMTLADYITWVRVDRAKFM 259 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 L+KY+ ++EVA RCGF D +YFCRVF+ + G TP +Y A Sbjct: 260 LKKYNFKLNEVALRCGFKDVNYFCRVFKNRTGRTPTDYRASI 301 >UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9U6_TOLAT Length = 284 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 98/280 (35%), Positives = 158/280 (56%), Gaps = 9/280 (3%) Query: 10 QQFFADLFSGLVLNP--QLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAK- 66 QQ F D+FS + + ++ +A P + + FPRL+ VL G Y N+L Sbjct: 2 QQVFQDIFSVITEEELSEHTHQLVYAHDTCPPPQYAFQVTFPRLEWVLSGNYQNILCDSQ 61 Query: 67 ----QQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFY-DSRTTSLLHPAR 121 +QRL G+ LF+PA N PV + V +LSL+F LGLS S+ + Sbjct: 62 GDKIEQRLTTGQFLFVPANCWNKPVWQEDVCVLSLLFGRRQLGLSLVSWSQQQQNFIDVQ 121 Query: 122 QIQLPSLQRGEGEAMLTALTHLSRSPLEQ-NIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 + P + +ML AL L S L+ +Q ++++L + +++ P R Sbjct: 122 KHSYPLSAKSPVHSMLQALIDLQASELQTPRSLQLQLMTVLTFTQELLHQPQPEKYQRAQ 181 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 ++ IC +VQ+N+ + ++RE+VA+ FNI+PNHLS+LF Q G M F +Y+ +VR+ +A+ Sbjct: 182 SVFQRICIYVQENFHKAISRETVARRFNISPNHLSRLFRQQGHMNFADYMVYVRIDRAKF 241 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 +L++Y + + E+A RCGF D++YFCRVF+++ G TP EY Sbjct: 242 MLRRYPMHLEEIAHRCGFRDTNYFCRVFKKKTGRTPTEYR 281 >UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XZ22_KLEP3 Length = 287 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 148/276 (53%), Gaps = 7/276 (2%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGN-LLEAKQQRLV 71 L + +GRV+FA + S + +DFPRL+I+L G+ + L L Sbjct: 5 INQLIDSFLKKQNGIGRVYFAGEMRSPAEPVVQVDFPRLNIILNGQLPDRALGENASPLE 64 Query: 72 EGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRG 131 ++L+IP + N P P +LLS++F L S ++ ++ +L+RG Sbjct: 65 ANDVLYIPGDSWNCPQWQAPCLLLSILFDKQRLECSLQHWNGKAITVVEKRQ---ALRRG 121 Query: 132 E--GEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNW 189 G +L AL L P EQ + +V+SLL C ++ S R L+ +I + Sbjct: 122 PRVGSFLLQALNELRMQPQEQRTARSIVVSLLSHCHDLLGSQAQTSS-RSQALFEAIRQY 180 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 + +YA+PL+RESVAQ F ++PN+LS LF + G M F EY+ +R+ +ARM+L+ + + + Sbjct: 181 MDAHYAEPLSRESVAQAFYLSPNYLSHLFQKCGPMGFNEYLNHIRLEQARMLLKGHDMKV 240 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 ++A CGF DS+YFCR+FR+ +P EY ++ Sbjct: 241 KDIAHACGFADSNYFCRLFRKTTERSPSEYRRQYHS 276 >UniRef50_P32677 Uncharacterized HTH-type transcriptional regulator yijO n=33 Tax=Gammaproteobacteria RepID=YIJO_ECOLI Length = 283 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 94/270 (34%), Positives = 142/270 (52%), Gaps = 4/270 (1%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 L S L+ P L +++FAS +P + +DFPRL+IVL GE+ + LV G++ Sbjct: 8 LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDV 65 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 L++PA N P P S++F LG S + A+Q + G Sbjct: 66 LYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ-HVARRGPRIGSF 124 Query: 136 MLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 +L L + P EQ + +V SLL CR ++ + R L+ +I +++ + YA Sbjct: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ-IQTASRSQALFEAIRDYIDERYA 183 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 LTRESVAQ F I+PN+LS LF + G + F EY+ R+ A+ +L+ Y L + EVA Sbjct: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 CGF DS+YFCR+FR+ +P EY ++ Sbjct: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 >UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae RepID=C3SIM7_ECOLX Length = 283 Score = 249 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 93/270 (34%), Positives = 141/270 (52%), Gaps = 4/270 (1%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 L S L+ P L +++FAS +P + +DFPRL+IVL GE+ + LV G++ Sbjct: 8 LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVD--TGAGATLVPGDV 65 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 L++ A N P P S++F LG S + A+Q + G Sbjct: 66 LYVAAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQ-HVARRGPRIGSF 124 Query: 136 MLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 +L L + P EQ + +V SLL CR ++ + R L+ +I +++ + YA Sbjct: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ-IQTASRSQALFEAIRDYIDERYA 183 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 LTRESVAQ F I+PN+LS LF + G + F EY+ R+ A+ +L+ Y L + EVA Sbjct: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 CGF DS+YFCR+FR+ +P EY ++ Sbjct: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 >UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBI1_VIBHO Length = 275 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 81/247 (32%), Positives = 142/247 (57%), Gaps = 4/247 (1%) Query: 38 SLPVGSLCIDFPRLDIVLRGEYGNLLE----AKQQRLVEGEMLFIPARAANLPVNNKPVM 93 + P G+ ++F RL+++L GEY +++ K+ L +GEM++IP+ A + P Sbjct: 25 TPPQGAYQVNFNRLELILDGEYDLIVDARTGEKKLLLQQGEMVYIPSNAWSKPTWESTCK 84 Query: 94 LLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNII 153 +LS++F+ +G SF + ++ +P E +L AL +S + Sbjct: 85 ILSILFSKHQIGFSFVHHEVGNGFVDVQKYAMPLPTSMAVEHVLDALNSMSDESRSMVMA 144 Query: 154 QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 L +L+ C ++ P R + LY S+C +VQ+N+ + +TR SVA F ++ H Sbjct: 145 GHLANALVTYCNELLQGPQQEKVSRREKLYRSMCIYVQENFHKNITRTSVASRFGVSSAH 204 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 +S+LF Q G++R+ +YV +VR+ +A+ +L+KY+ + E+A RCGF D++YFCRVF+++ G Sbjct: 205 VSRLFNQEGSVRYADYVTYVRLDRAKFMLKKYNFKVDEIAHRCGFKDTNYFCRVFKQKTG 264 Query: 274 LTPGEYS 280 TP EY Sbjct: 265 KTPSEYR 271 >UniRef50_C8QGZ7 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QGZ7_9ENTR Length = 285 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 80/288 (27%), Positives = 145/288 (50%), Gaps = 24/288 (8%) Query: 12 FFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLV 71 F + S L V A+ A P + + PR++++++G LL + ++V Sbjct: 4 FIQSILSEFSLQCATTESVLVANGNAQPPAMAYHLHVPRIELIVKGTLSMLLPKGEDKIV 63 Query: 72 E-----GEMLFIPARAANLPVNNKPVMLLSLVF--------APTWLGLSFYDSRTTSLLH 118 + G + +IPA + N P+ PV+ +S+VF W G F + +L + Sbjct: 64 KYLRPVGTVTYIPANSWNSPLWGSPVICMSIVFWKQDVGFSISNWDGTQFKEVEKFNLEN 123 Query: 119 PARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPR 178 + ++ L+ E A TH + +I+ L+ LL+ + G S + Sbjct: 124 SSSSVRDRLLELAES----LAWTHNNSGETFAHIVYALLNDLLY------QITDGMSNAK 173 Query: 179 GDF-LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAK 237 G L I + + +Y + RESVA+ FNI+P +LS+LF++ ++F EY++ R+++ Sbjct: 174 GPLSLLDEIKSHIDSHYQADINRESVAETFNISPGYLSRLFSRESDVKFNEYLKLARISR 233 Query: 238 ARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 ++ +L +L I+EV+++CGF D++YFC+VFR TP EY + +G Sbjct: 234 SKTLLTSTNLKINEVSEKCGFTDTNYFCKVFRDINDCTPLEYRRKNKG 281 >UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=Klebsiella RepID=B5XY24_KLEP3 Length = 277 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 6/268 (2%) Query: 15 DLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNL-LEAKQQRLVEG 73 D+ L+ L +V F S+P + + FPRL+IVL G+ L L Sbjct: 7 DILHRLIGQKDHL-QVRFPEPDISVPALAFNVPFPRLEIVLEGQLNEQGLPLAASTLTTL 65 Query: 74 EMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEG 133 ++L++ A LP P LS++F LG S LH +Q + L G Sbjct: 66 QVLYVQAGKWTLPQWTGPATTLSILFGRQKLGFSIQRWD-GKCLHTEKQ-SVSRLGPRVG 123 Query: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 +L +L +S P + + +V +LL CR + + R L+ ++ +++++N Sbjct: 124 SYLLLSLNEVSLQP-DPLTARLVVAALLSHCREQL-VGLEMRVSRSRDLFLAVQDYLEEN 181 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 + PLTRESVA+ F+ITPN+LS +F + G++ F EY+ VR+ KA+ +L+ Y L + E+A Sbjct: 182 LSLPLTRESVAKRFHITPNYLSHIFQKSGSVGFNEYLTRVRLEKAKQLLRGYDLKVKEIA 241 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 CGF DS+YFCRVF+R +P EY Sbjct: 242 HNCGFVDSNYFCRVFKRYTERSPSEYRR 269 >UniRef50_Q7NVM9 Probable transcriptional regulator, AraC family n=1 Tax=Chromobacterium violaceum RepID=Q7NVM9_CHRVO Length = 272 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 133/261 (50%), Gaps = 2/261 (0%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEA-KQQRLVEGEMLFIPARA 82 P L R+ A +P G+ + FPRL++VL Y E + L E LFIPA Sbjct: 12 PSALQRLCHAPAGKHMPAGAYQVHFPRLELVLSNRYHYSHEGCENASLSAQEALFIPAEH 71 Query: 83 ANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 LP +L ++F +G S S ++ ++ + + QRG ML L Sbjct: 72 WTLPNWCANGEVLHILFDYARIGFSLVRSGPQGVISTHKESMVLA-QRGSLNGMLDVLAG 130 Query: 143 LSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 L R + +++ +LL L +S+ + + +G L+ +IC ++ ++ PLTRE Sbjct: 131 LCRDGADPEVLRLQGQALLALLQSLYDEARDSQWQQGGNLFRAICLYISEHLYAPLTRED 190 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 VA F+I+ HLS+LF QH + F E++ R+ A+ +L++ L + VA RCG+ D + Sbjct: 191 VALRFSISATHLSRLFRQHLGLGFCEFLSHARLDLAKALLRQGQLPLSRVAARCGYADVN 250 Query: 263 YFCRVFRRQFGLTPGEYSARF 283 YF RVF+++F +TP Y F Sbjct: 251 YFHRVFKQRFAMTPCAYRREF 271 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 10/264 (3%) Query: 27 LGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP 86 + R+ ++ S VG+ F + + GE + ++ + +G+++ +P+ + Sbjct: 11 IKRIKRSNTSCSTGVGAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRT 70 Query: 87 VNNKPVMLLSLVFA-----PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT 141 N M +V + W+ + + P + +P +R A+L L Sbjct: 71 TYNGKGMHERIVISFRNEATEWIQNQTGKELMENCMKPG-VVNIPEKRRDYVVALLDKLI 129 Query: 142 HLSRSPLEQN--IIQPLVLSLLHLCRSVVNMPPG--NSQPRGDFLYHSICNWVQDNYAQP 197 + SP E + I+ ++ LL N + + + ++ ++YA Sbjct: 130 FENDSPDELSPAFIKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADN 189 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 L+ E VA FN++ ++LSK F F EY+ VR+ A +L + + SI ++A CG Sbjct: 190 LSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECG 249 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSA 281 F DS+YF FR+ G++P +Y Sbjct: 250 FNDSNYFGDAFRKAKGISPHKYRK 273 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 122/276 (44%), Gaps = 16/276 (5%) Query: 15 DLFSGLVLNPQLLGRVWFASQPASLPVG---SLCIDFPRLDIVLRGEYGNLLEAKQQRLV 71 + ++LN Q+ ++W A + P + + +L +L GE + ++ V Sbjct: 9 EAIQQMLLNMQV--QIWEAERTQCWPEWKEFDYTVSYNKLYFILDGEGWVKIGDEELYPV 66 Query: 72 EGEMLFIPARA--ANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQ 129 G+++ +PAR + ++ +P + F+ + DS S L+ L Sbjct: 67 PGQLVLMPARTRQSYSVISGRPYLKYWSHFSA-----TVGDSDVFSWLNVPHCYDLSG-- 119 Query: 130 RGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL--YHSIC 187 E A+ L RS ++ + L L R + P + + + H + Sbjct: 120 NAEMPALFQQLVDAHRSDTLAARLREKSVMLDILSRVFEHQQPQIHADKMEDMGRLHKVQ 179 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++++ + +T E +A ++ PN+ K F +H + +Y+ RM +A+++L+ L Sbjct: 180 QYIKNHLHEEITLEQMAGTLHLHPNYFIKYFKRHFGITPQKYLSLKRMEQAKLMLRTTSL 239 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 SI E+A GF ++YF + FR++ G +P EY Sbjct: 240 SIKEIADATGFESANYFSKTFRKEVGYSPSEYRNNI 275 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 7/264 (2%) Query: 29 RVWFASQPASLPVGS-LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV 87 ++ FA + A + + + +L G L+ LV G+ + IP A + V Sbjct: 14 KIDFAERDADFHMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMHRFV 73 Query: 88 N--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPAR--QIQLPSLQRGEGEAMLTALTHL 143 N V +L F + F+ L H + L SL +G + L Sbjct: 74 YDCNSTVKRYNLFFTMDFAASLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTLYQE 133 Query: 144 --SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRE 201 + Q +I + +L L + + + ++ ++ +P++ Sbjct: 134 TVGQDSCSQAVIPAYISLILSLLVRNRDHIQLQDLDSAENAIQASARYISTHFQEPVSLH 193 Query: 202 SVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDS 261 VA + +++P + SK F Q + F EY+ R+ +A +L L++ E+A RCGF D Sbjct: 194 MVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRCGFNDG 253 Query: 262 DYFCRVFRRQFGLTPGEYSARFQG 285 +YF FR++FGL+P +Y R + Sbjct: 254 NYFGDAFRKEFGLSPLQYRKRQKN 277 >UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC family n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZE29_EDWTE Length = 275 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 127/238 (53%), Gaps = 3/238 (1%) Query: 49 PRLDIVLRGEYGNLLE-AKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLS 107 PRL+IV+ G E + R G++L++P+ ++ LLSL+FA + L+ Sbjct: 35 PRLEIVIAGSLLRRDEHGRAYRQRCGDVLYLPSGEQRQITGDEEATLLSLLFAKQRIVLT 94 Query: 108 FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSV 167 + + L +Q Q+ G +L AL + P Q + V +LL C + Sbjct: 95 LWQWD-GAQLQRRQQTQIARRGPRTGTFLLQALNEQAMQPAAQATARLTVSALLSHCSDL 153 Query: 168 VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFI 227 + + P L ++I +++ D+Y L+R++VA+ F+ITPN+LS+LF + F Sbjct: 154 LAGHL-RTAPHRQALLNAIRDYIDDHYMDALSRDAVARRFHITPNYLSQLFQRADGGGFN 212 Query: 228 EYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 Y+ VR+ +A+ +L++Y ++I +A CG+ DS+YFCR+FR++ TP EY ++ Sbjct: 213 HYLNHVRLEQAKTLLKEYEMTIKAIAHACGYDDSNYFCRLFRQRTERTPSEYRRQYHS 270 >UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16 Tax=Enterobacteriaceae RepID=C0Q3L5_SALPC Length = 322 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 112/247 (45%), Gaps = 13/247 (5%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPT 102 +F L +V RG ++L + R+ G++ +I A + + ++L ++++ P Sbjct: 73 EHTHEFCELVMVWRGNGLHVLNERPYRITRGDLFYIRAEDKHSYTSVNDLVLQNIIYCPE 132 Query: 103 WLGLSFYDSRTTSLLHPAR---QIQLPSLQRGEGEAMLTALTHLS--RSPLEQNIIQ--- 154 L L+ A+ +L S+ + ++ L H S R PL + + Sbjct: 133 RLKLNVNWQAMIPGFQGAQWHPHWRLGSMGMNQARQVINQLEHESNGRDPLANEMAELLF 192 Query: 155 -PLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 LV++L + ++P + + D L ++ N ++ P ++ Q + Sbjct: 193 GQLVMTLKRHRYATDDLPTTSRETLLDKLITALANSLEC----PFALDAFCQQEQCSERV 248 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 L + F M +Y+R VR+ A+ +LQ L + E++ +CGF DS+YF VF R+ G Sbjct: 249 LRQQFRAQTGMTINQYLRQVRICHAQYLLQHSPLMVSEISMQCGFEDSNYFSVVFTRETG 308 Query: 274 LTPGEYS 280 +TP ++ Sbjct: 309 MTPSQWR 315 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 116/277 (41%), Gaps = 9/277 (3%) Query: 8 ADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQ 67 A + F+ L L + DF + V G +LE K+ Sbjct: 2 AHEHFYVKRSERESLVQPELIYTGLLEDAPNWFNIQHSHDFCEILYVAGGAGEAILEGKK 61 Query: 68 QRLVEGEMLFIPARAANLPVNNK--PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL 125 RL G+++ + + ++ P+ L+ L + L ++ Sbjct: 62 FRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIR----DFAVPGLPAGCLSQEKYRVLS 117 Query: 126 PSLQRGEGEAMLTALTHLSRSPLE--QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLY 183 R + + L L + S +E Q I Q LV +LL L ++ + P + Sbjct: 118 CGEYRYKMDIYLRELLQETSSQIEFYQEISQGLVSALLVLVMRLIRINPEDEAALSQE-C 176 Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 I ++ N+ P+T +S+++ I+ ++LS LF + + I+Y+ RM KA +L Sbjct: 177 QKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVSPIKYLTSKRMEKACELLS 236 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + L + EV++ G+ + YF +VF+R +G++P +Y Sbjct: 237 ETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9G4_9BACT Length = 261 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%) Query: 30 VWFASQ-PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN 88 V+FA + + P + + +V+ GE N+L K+Q G ++ +PA ++ +N Sbjct: 7 VYFADRYDSEKPTSVHSHNGTEIILVVHGECVNVLPGKEQHAKAGSVIVVPAGMSHRQLN 66 Query: 89 NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEG--EAMLTALTHLSRS 146 + V + ++F +++ AR + + + G E +++ T +R Sbjct: 67 SGRVTTVYVIF----------EAQQECFDCSARILDVKGDRYAPGWFEQIVSLKT--ARL 114 Query: 147 PLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQF 206 E + + ++LS L + + G S ++++NY + ++ VA Sbjct: 115 DREADRLLGVLLSYLTGRENRLQREGGRSPAAA-----RAMAYLEENYNRNISVAEVANA 169 Query: 207 FNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCR 266 ++P+HL LF + + + + +RM +AR +L +LSI E+ +CGF YFCR Sbjct: 170 CGVSPSHLHLLFRREFSESPLASLNRIRMNRARQLLLNCYLSIGEIGFQCGFNQPHYFCR 229 Query: 267 VFRRQFGLTPGEYS 280 FR+ G TPGEY Sbjct: 230 AFRKIHGCTPGEYR 243 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 108/250 (43%), Gaps = 16/250 (6%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN-------KPVMLLS 96 D L + GE L+ R+V G ++ IP + + L Sbjct: 26 HSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQRTALRF 85 Query: 97 LVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLE------Q 150 + WL + L A I++P ++ E ++T + + ++ P E + Sbjct: 86 SIKDTDWLCSALGKDFVKDNLT-AGIIEVPDKRKEYIENLITRMIYENQMPDELSMGMVK 144 Query: 151 NIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNIT 210 + Q ++ +L + + + + +V +NY + + + VA+ F+I+ Sbjct: 145 TLFQEFMIFVLRC--KLYGDTSAHEIDAQNSTIQDVATYVYNNYDKQIYLDDVAKQFSIS 202 Query: 211 PNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRR 270 ++LSK F Q F EY+ VR+ +A +L + + SI ++A CGF DS+YF FRR Sbjct: 203 RSYLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDAFRR 262 Query: 271 QFGLTPGEYS 280 G++P +Y Sbjct: 263 IKGISPNKYR 272 >UniRef50_A7ML57 HTH-type transcriptional activator rhaR n=92 Tax=Enterobacteriaceae RepID=RHAR_ENTS8 Length = 283 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 11/249 (4%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPT 102 +F L +V RG ++L + R+ G++ +I A + + ++L ++++ P Sbjct: 33 EHTHEFCELVLVWRGNGLHVLNDRPYRITCGDLFYIRAEDRHSYQSVNDLVLHNIIYCPE 92 Query: 103 WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA------LTHLS--RSPLEQNIIQ 154 L L+ LL R + R + M+ A L H S + L + + Sbjct: 93 RLQLNVNW---RDLLENPRGVNGDPRWRLSSQGMVQARQVIDQLEHESPKQDALSHCLAE 149 Query: 155 PLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHL 214 L L L R P G + P + + ++ P + + I L Sbjct: 150 SLFLQLAITLRRHRYQPSGGTGPGEGETLDLLMAALGNSLDVPFDLQHFCSHYQIAERPL 209 Query: 215 SKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGL 274 +LF Q M +Y+R +R+ +A+ +L+ L I E+A RCGF DS+YF VF R+ G+ Sbjct: 210 RQLFRQQTGMTISQYLRQLRICQAQYLLRHSSLLISEIAARCGFEDSNYFSVVFTRETGV 269 Query: 275 TPGEYSARF 283 TP + ++ Sbjct: 270 TPRVWRQQW 278 >UniRef50_A7FN79 HTH-type transcriptional activator rhaR n=29 Tax=Enterobacteriaceae RepID=RHAR_YERP3 Length = 290 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 7/247 (2%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPT 102 F + IV RG ++L R+ G++ +I A + + ++L ++++ P Sbjct: 33 EHTHQFCEIVIVWRGNGLHVLNDHPYRITCGDVFYIQAADHHSYESVHDLVLDNIIYCPE 92 Query: 103 WLGLSFYDSRTTSLLHPARQ---IQLPSLQRGEGEAMLTALTHLSRSPLEQNI--IQPLV 157 L L+ + L P + +L + + ++ L SR +I + L+ Sbjct: 93 RLHLNAQWHKLLPPLGPEQNQGYWRLTTQGMAQARPIIQQLAQESRKTDSWSIQLTEVLL 152 Query: 158 LSL-LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSK 216 L L + L R + P G+ L I + +Q + + L + Sbjct: 153 LQLAIVLKRHRYRAEHAHLLPDGEQL-DLIMSALQQSLGAYFDMADFCHKNQLVERSLKQ 211 Query: 217 LFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 LF Q M Y+R +R+ A+ +L+ I ++A RCGF DS+YF VF R+ G+TP Sbjct: 212 LFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTP 271 Query: 277 GEYSARF 283 +Y RF Sbjct: 272 RDYRQRF 278 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 19/285 (6%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLE--AKQQRL 70 D F + R+W+ Q + ++I+L E +E + + Sbjct: 25 VVDSFETISFQKDSTIRIWYNEQNQNYDTHWH----NAIEIILPVENHYDVEASGQAYHI 80 Query: 71 VEGEMLFIPARAANL---PVNNKPVMLLSLVFAPTWL-GLSFYDSRTTSLLHPARQIQLP 126 + E+L IP+ + P + K + L V + + G + S TS LH + P Sbjct: 81 LPSEILIIPSGEMHALYAPESGKRFIFLFDVSSIAQMKGYTSIQSLMTSCLHITKTT-YP 139 Query: 127 SLQRGEGEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLCRSVVN----MPPGNSQPRGD 180 + + ++ S E I L+ + + R+ +N P S + + Sbjct: 140 QIYNDVYQLLVQMRNEYFSSNEFRELAIYSHLINLFVSIGRNRINNVDLFPNTRSHKQKE 199 Query: 181 FL--YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKA 238 +L ++ + +++ +Y + LT +++A F + H ++LF Q+ F +Y+ + R+ A Sbjct: 200 YLQKFNEVLDYIDSHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFYDYLIYRRIKAA 259 Query: 239 RMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +L LSI E+A + GF F R+F+++ G TP EY + + Sbjct: 260 EELLANPELSITEIALQSGFSSISTFNRIFKQKKGCTPSEYRSLY 304 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 124/253 (49%), Gaps = 19/253 (7%) Query: 45 CIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWL 104 DF L IV+ G ++++ ++ + +G++ I + + N K + ++++ L Sbjct: 33 HTDFSELVIVMNGTATHIVDNEKFNIKKGDVFVINSNTCHGYENAKDFRICNIMYRSENL 92 Query: 105 GLSFYDSRTTSLLHPARQIQ--------------LPSLQRGEGEAMLTAL--THLSRSPL 148 L+ YD + + H I+ L L + +L +L +++++ Sbjct: 93 LLADYDIKKNAGFHALFVIEPYFTKEHSFKSNLTLKPLDFEKIHILLDSLLSEYMTKTDG 152 Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL-YHSICNWVQDNYAQPLTRESVAQFF 207 + + L + L+ + + GNS + D + ++++++Y + ++ + +A+ Sbjct: 153 WKTSTKALFMLLVVTLARLYDF--GNSSEKVDVINIAKSISYIENHYTEDISIDLLAKIS 210 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 + +P H +++F++ + + Y+ +R+ +A +L++ L I +A +CGF DS+YF R+ Sbjct: 211 HYSPRHFARIFSETYSTTPLNYIISLRIRRACSLLKETTLPISTIAIQCGFSDSNYFSRI 270 Query: 268 FRRQFGLTPGEYS 280 F++ LTP +Y Sbjct: 271 FKKNLYLTPKQYR 283 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 98/260 (37%), Gaps = 19/260 (7%) Query: 39 LPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN---KPVMLL 95 + + + V+ GE + + + + +G + IP +++ N +++ Sbjct: 38 FDLREHDHAYLEIVYVMSGEGYHYVADEVNKTSKGSLYIIPIGTSHIFRPNGTANRLLVY 97 Query: 96 SLVFAPTWLGLSFYDSRTTSLLHPARQI------------QLPSLQRGEGEAMLTALTHL 143 +L P W+G + P E + T Sbjct: 98 NLCIRPDWIGELGVWLSQYCRDTDVLHVLDGNPGTYLFLRDTPLELAPSFEQLHREFTEE 157 Query: 144 SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL---YHSICNWVQDNYAQPLTR 200 S E ++ L+ L + R + Q G + SI + + A+PL Sbjct: 158 SWG-FETTVLAGLLQLLTRISRKLKTQDSTGDQTTGSTRHSEFVSIVEHINRHIAEPLKM 216 Query: 201 ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPD 260 E +A I+ H +LF Q M F EYV+ R+ A +L S+ ++A++ G+ D Sbjct: 217 EQLADQAGISQRHFIRLFRQQTGMGFSEYVQNKRVELACQLLTGTSQSVADIAKKVGYQD 276 Query: 261 SDYFCRVFRRQFGLTPGEYS 280 +F VFR+ G+TP +Y Sbjct: 277 PAHFREVFRKVMGITPSQYR 296 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 7/245 (2%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLVFAP 101 + + +L G+ + L G+M IP + L + + F+ Sbjct: 36 HYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIYFSR 95 Query: 102 TWLGLSFYDSRTTSLLHPARQIQ--LPSLQRGEGEAMLTALTHLSRSPLEQNIIQP---L 156 + + H Q + +PS R + E +L + + IQ L Sbjct: 96 DTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCSLL 155 Query: 157 VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSK 216 L+ L R G++ + ++ +Y + +T VA F N++P + SK Sbjct: 156 HQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPTYFSK 215 Query: 217 LFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 F + F EY+ ++R+ KA +L+ LS+ VA CGF D +YF VFRR G++P Sbjct: 216 KFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGVSP 275 Query: 277 GEYSA 281 EY Sbjct: 276 REYRK 280 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 18/279 (6%) Query: 23 NPQLLGRVWFASQPASLPVGSLC-IDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 NP ++ + P+ P+ L D L +V G ++ + L GE +F+ + Sbjct: 14 NPIYPVSLYEITCPSDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSG 73 Query: 82 AAN--LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHP--ARQIQLPSLQR---GEGE 134 + V KP ++VF + D + P ++ ++P+ R G G Sbjct: 74 ELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGM 133 Query: 135 AMLTALT-----HLSRSPLEQNIIQPLVLSLL----HLCRSVVNMPPGNSQPRGDFLYHS 185 +L L H + + I+ L+ S+L L + V + P R + L + Sbjct: 134 ELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERL-KT 192 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + +++ NYA+P+ + +A+ ++ ++ + F + T IEY+ R+ +A L++ Sbjct: 193 VIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQT 252 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 I EVA GF YF VFR++FG TP EY +R Q Sbjct: 253 DAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 120/268 (44%), Gaps = 19/268 (7%) Query: 34 SQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVM 93 S P + DF L +V G ++LE + + G++ + R + + + Sbjct: 32 SHPHDVTEIEHWHDFCELAMVTGGRGVHVLEGESFHVSTGDVFVLQGRQVHCFRERQGLA 91 Query: 94 LLSLVFAPT--------------WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA 139 L+++++ P + L + S + +++L + G EA++ Sbjct: 92 LINVMYDPERLPLPLGLLRRLPGYSALFMLEPTFRSTHRFSSRLRLARRELGSAEAIVER 151 Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWV---QDNYAQ 196 + + S++ E + + ++LSLL +++ S R + V + + + Sbjct: 152 IENESKAAQEGH--EAVLLSLLVELMVLLSRHYAQSDTRESHALLQVGQLVSMLEQRFGE 209 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 P T E +A+ ++ ++L ++F Q I+++ +R+ AR +L++ L + E+A C Sbjct: 210 PWTLEQLAEQARVSRSNLLRMFRQATGQSPIDFLIGLRIEAARRLLRRSDLGMTEIALEC 269 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 GF D ++F R FR+ G+TP Y + + Sbjct: 270 GFSDGNFFPRQFRKTCGVTPSIYRRQMR 297 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 13/264 (4%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL---- 85 ++ S +G +F + V G + + + + G + FIP +++ Sbjct: 22 LYVNRAYESFDMGEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSHVFRPK 81 Query: 86 -PVNNKPVMLLSLVFAPTWL-----GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA 139 P ++P+++ + + ++L G + GE AM Sbjct: 82 TPKKDRPLIVYNCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGEYHAMFRE 141 Query: 140 LTHL--SRSPLEQNIIQPLVLSLLH-LCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 L ++ P ++ LV+ +L L R + + ++ NYA Sbjct: 142 LYQEFAAKPPAYMAVLASLVMRILTGLYRHKLQIIAPAGDRPQWLSVDEAIAFIDRNYAS 201 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 L +A ++ S+LF +H M IEYV+ +RM A +L H S+ ++A Sbjct: 202 ELKLGELAAQAKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSVEDIAGAV 261 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYS 280 G+ D +F R+F+++ G+TP +Y Sbjct: 262 GYADMKFFYRLFKKKTGVTPRQYR 285 >UniRef50_UPI0001787DEA transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787DEA Length = 290 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 121/273 (44%), Gaps = 23/273 (8%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV-- 87 ++ + DF + + GE + +E QR+ +G M +IP ++ Sbjct: 20 MYVNRNAENFTGSYHNHDFLEIAYIAEGEGFHHMENSVQRVRKGHMFYIPLGMPHVFRPT 79 Query: 88 --NNKPVMLLSLVFA----PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT 141 N KP+++ + +F+ P + + DSRT SLL +Q++ +L Sbjct: 80 SSNGKPLIVNNCIFSVKLLPKLIAFA-SDSRTASLL---KQMEDGTLGYRAITDRHDRFE 135 Query: 142 HLSRSPLEQNIIQ----------PLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQ 191 L S EQ +Q L+ ++ R++ + P S+P +H + +V+ Sbjct: 136 KLFVSLYEQYAMQISGSAVYLHTLLLQLIIEFSRAIEHSQPITSEPSHPS-FHDVLQYVE 194 Query: 192 DNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHE 251 Y LT +AQ + HL +LF ++ + Y++ VR+ +R +L+ I Sbjct: 195 GQYMHELTLTRLAQISGFSERHLQRLFRRYTGQSWHHYLQTVRIRMSRELLRTTTDKISM 254 Query: 252 VAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +A++ G+ D F VF+R GLTPG+Y + Q Sbjct: 255 IAEKVGYKDMHSFNSVFKRSTGLTPGQYRSETQ 287 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 6/260 (2%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN 89 V A + DF L IV RG ++ R+ G++ ++ A + + Sbjct: 21 VTVAERSPQSAFPLHHHDFDELVIVWRGNGLHIWNDVPYRITCGDLFYVTADDRHSYESV 80 Query: 90 KPVMLLSLVFAPTWLGLSFYDSRTTS---LLHPARQIQLPSLQRGEGEAMLTALTH--LS 144 + L ++++ L L + R +L + +LT + Sbjct: 81 HALELDNILYIRPRLTLPTDWQNLLPDGGVAQQQRYWRLGEQGMAIIRDRVESLTQECMK 140 Query: 145 RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 PL + + L++ + L + P G +Q + N ++D+ AQP E+ Sbjct: 141 SDPLSLQLSEVLLMQIALLALRYRHAP-GETQLADAHQLDLLMNALRDSIAQPFRLEAFC 199 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 Q + + L F Q M +Y+R +R+ +A +L+ +I EVA +CGF DS+YF Sbjct: 200 QQYGFSLRSLRSRFKQQTGMSVSQYLRQLRLCRAMELLRYDRQTISEVAAQCGFDDSNYF 259 Query: 265 CRVFRRQFGLTPGEYSARFQ 284 VF + FG+TP Y RFQ Sbjct: 260 SVVFHQAFGVTPSSYRQRFQ 279 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 9/250 (3%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPV--MLLSLVFAP 101 + + +L G+ ++ L G+ + IP + + + + + F Sbjct: 38 HYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALYEEGLQAERYDMYFTK 97 Query: 102 T---WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQ--PL 156 S + R I +P R E +L+ L+H + + +Q L Sbjct: 98 EEADAFHASCGREGFERVFLNPR-IAIPQPLRPGIEGLLSHLSHENGQEDAYSHVQQQSL 156 Query: 157 VLSLLHLC-RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 + +L L R +S + ++ Y + LT +++A N++P + S Sbjct: 157 LFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHLTLDAMAAMSNMSPTYFS 216 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 + F F EYV ++R+ KA +L+ ++ +A CGF D +YF VF++ GL+ Sbjct: 217 RKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFKKLTGLS 276 Query: 276 PGEYSARFQG 285 P EY +G Sbjct: 277 PREYRNGIRG 286 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 18/255 (7%) Query: 44 LCIDFPRLDIVL--RGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLVF 99 C ++ + GE + K + GE LFIP+ + PV++KP L + V Sbjct: 34 HCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEGLFIPSGHLHGAYPVSDKPFSLYATVV 93 Query: 100 APTWLGLSFYDSRTTSLLHPARQ------IQLPSLQRGEGEAMLTALTHLSRSPLEQNII 153 P ++ YD + + P + I+L + MLT L ++ Sbjct: 94 HPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCPTHYWMSD-MLTMLQATISQFQQKEEG 152 Query: 154 QPLVL--SLLHLCRSVVNMPPGNSQ-----PRGDFLYHSICNWVQDNYAQPLTRESVAQF 206 LV+ +LL + +V P + P+ + ++ ++Y + LT + +A Sbjct: 153 YELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIRQIKKVLQFIDEHYDEKLTIKQLANL 212 Query: 207 FNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCR 266 ++ H S+ F M +EY+ R+ KA +L++ +I +++ GF YF + Sbjct: 213 VQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLLRETDRTIMDISMSVGFDHPSYFIK 272 Query: 267 VFRRQFGLTPGEYSA 281 +F+R TP E+ Sbjct: 273 LFKRHKRCTPSEFRR 287 >UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D00 Length = 291 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 124/278 (44%), Gaps = 20/278 (7%) Query: 21 VLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 + +++ R + Q D L V +G+ +E K EG++ IP Sbjct: 13 LFPMEMVYRTKKSPQLELPH---HLHDLYELVYVYQGKGTFFIENKLMEKKEGDLFIIPG 69 Query: 81 RAAN--LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLL--------HPARQIQLPSLQR 130 + P ++P++ +L FAP+ + + S+L + + QLP + Sbjct: 70 NTIHSSFPDPDQPIVSSALFFAPSLVLGANGSDLQYSVLSCFEYAQKTGSYRHQLPESNQ 129 Query: 131 GEGEAMLTALTH---LSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRG---DFLYH 184 E ML ++ L++ + ++ L LLH+ R + + + +L Sbjct: 130 AYIEDMLKGISEEIRLAQLGFREALVLQLRSLLLHINRYISTLSAEQTAHSQIGPAWLMD 189 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 SI W+ ++ QP+ +++ + P H S++F ++ + Y+ R+A+A+ +L+ Sbjct: 190 SI-QWIHEHLDQPIGLAALSAQAAVDPAHFSRMFKKYTGLHVTGYMHAKRIARAKELLRN 248 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + S+ ++A+ CG+ +F R F++ G+TPG Y + Sbjct: 249 HEASVGQIAEICGYATLTHFHRNFKKLTGMTPGAYRRQ 286 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 118/259 (45%), Gaps = 12/259 (4%) Query: 34 SQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVM 93 + +S+P + L +L GE ++ + +G+++ + + +++ ++ Sbjct: 24 NGSSSMPRP-HEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDLHSTASSEKLL 82 Query: 94 LLSLVFAPTWLGLSFYDSRTTSLLH--PARQIQLPSLQRGEGEAMLTALTHLSRSPLEQN 151 ++ + + D+ +LL +R I++P + E E +L ++ L+ EQ Sbjct: 83 FERVLIGFSRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSM--LAECQTEQT 140 Query: 152 IIQPLVLSL-------LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 LV SL LH + + + I +++ N+ + LT E VA Sbjct: 141 HYSSLVRSLMNELLIRLHRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFHEKLTLEQVA 200 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 + F I+P++LS++F + F EYV+ VR+ +A+ +L S+ +++ GF +F Sbjct: 201 KQFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAGFEHIAHF 260 Query: 265 CRVFRRQFGLTPGEYSARF 283 + F++ G TP +Y R Sbjct: 261 NKTFKKIAGTTPLQYRKRH 279 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 16/256 (6%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNK--PVMLLSLVFA 100 D L +L GE ++ + R+ G+++F+ A + +++ L L Sbjct: 32 DHLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHKTLDSGRPDHDRLVLYIN 91 Query: 101 PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE-----GEAMLTALTHLSRSP-------L 148 P L +P L+ E M+ + + P L Sbjct: 92 PELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVERMVGDMVNEMIHPQAGSSWLL 151 Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFN 208 ++ L+ + R + + +++P ++ ++ DNY Q LT VA+ F Sbjct: 152 RHRTVELLL--FAYRSRHLGMVRSADTEPVLHPKTQAVVRYLNDNYRQALTLPEVAEAFR 209 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 I+P++LS+LF Q F +Y+ +R+ +A+ +L++ SI ++A R GF + +F ++F Sbjct: 210 ISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIAWRSGFSNFSHFGKMF 269 Query: 269 RRQFGLTPGEYSARFQ 284 +R L+P Y +++ Sbjct: 270 KRTVQLSPRAYRQQYR 285 >UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01F8 Length = 265 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNK--PVM 93 + D +L ++L GE + G+++F+P + N NK P Sbjct: 19 SKDWGEVNEHPDVNKLYLILEGEGSVTCNKTEYYPEVGDIMFVPKGSLNSYATNKDKPYK 78 Query: 94 LLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL------THLSRSP 147 F L A + P L + + + L H S++P Sbjct: 79 KYWCHFDADILSTDI-----------AVYLSFPLLVKNANKKISYKLFAKLVKYHESKNP 127 Query: 148 LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 ++ + L+L ++H S N P + + ++ +N + +T +A+F Sbjct: 128 IDAIYAKALLLRIIHFYFSECEFVKINDVP-NQTVMGKLVKYIDENLERKITLTELAKFA 186 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 ++ N+L LF+ IEY+ ++ KA+++L+ +I E++ GF YF V Sbjct: 187 HLNANYLCTLFSSTFGQTPIEYITNKKIEKAKILLRTTTDTIEEISNTLGFSSPFYFSAV 246 Query: 268 FRRQFGLTPGEYSARFQG 285 F+++ G +P ++ G Sbjct: 247 FKKRIGYSPSQFRQSRMG 264 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 111/250 (44%), Gaps = 14/250 (5%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN---NKPVMLLSLVFA 100 DF + V G + +E + + G++ IP +++ + +++ + +F Sbjct: 34 HTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPIGTSHVFRPSSQDNQLVIYNCIFR 93 Query: 101 PTWLGLSFYDSRTTSLLHPARQIQLPS----LQRGEGEAMLTAL-----THLSRSPLEQN 151 L ++ LH PS + + + L+ + +L + P + Sbjct: 94 TCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKFLSIMHGMFREYLKKGPRYEF 153 Query: 152 IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITP 211 ++ ++ +L + + S P + ++ D++A LT + VA+ ++P Sbjct: 154 LMMGQLIQVLAMLQRYECDGSMVSTPTNN--MDDAIQYINDHFATNLTVQQVAERSFMSP 211 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 +H +LF + + F+++++ +R+ + +L+ +SI E A + G+ D +F +FR++ Sbjct: 212 SHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLFRKK 271 Query: 272 FGLTPGEYSA 281 G+TP EY Sbjct: 272 TGVTPREYRR 281 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 112/266 (42%), Gaps = 27/266 (10%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTW 103 D L + +GE+ ++ + + E + FI + + +N P ++VF Sbjct: 36 HWHDQLELIHMKKGEFQVEIDMDKHVVHEETICFINSEELHFIKSNHPCKESAIVFDLKM 95 Query: 104 LGLSFYDSRTTSLLHPARQIQLPSLQ-----RGEGEAMLTALTHLSR---------SPLE 149 L +DS SL+ P +L GE +L + + E Sbjct: 96 LSFDMFDSIQGSLIQPLLNGELKMPHFIFKKDKHGEEILKEYSEILEAYKISGQISQNPE 155 Query: 150 QNIIQPL------------VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP 197 NI + L +L++L+ ++ N R +++ + +++Q+NY++ Sbjct: 156 GNITEKLSSQIKIKASLLKILAILYENNLLIKENNKNKDYRVEYI-KTAISYIQNNYSEK 214 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 + + +++ N+ + + F + +EYV R+ KA+ +L++ + + ++ CG Sbjct: 215 IHIKDLSKQINMNEQYFCRFFKRMIGKTPMEYVNEYRIKKAKELLRETNRQVMDICLECG 274 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSARF 283 F + F +VF++ G+ P +Y F Sbjct: 275 FHNMGNFIKVFKKHTGINPMKYRKNF 300 >UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=C6D4D7_PAESJ Length = 289 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 124/279 (44%), Gaps = 19/279 (6%) Query: 20 LVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIP 79 + Q L + + + + +DF L IVL G +++ + + +G++ I Sbjct: 9 FTSDEQFLFYIGYGGHDEDMYLHDH-VDFSELVIVLNGNATHIVNTEVSFIKKGDVFVID 67 Query: 80 ARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTS------LLHPARQ----------I 123 ++ + + ++++ P L + D RT+ +L P + + Sbjct: 68 GATSHAYKDPHDFRICNIMYRPDILTSAGPDLRTSIGYQALFVLEPFYRNIQPFNSKLSL 127 Query: 124 QLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLL-HLCRSVVNMPPGNSQPRGDFL 182 +PSL+ A + ++ Q +++ + L+ +L R N Q L Sbjct: 128 PIPSLEYVSSLAAFMIEEYTNKLQGYQTMLRSRFMELVVYLSRQYQNQDQQGIQGNLMHL 187 Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 ++I ++++D+Y +PLTRE +A I+ HL+++F + Y+ +R+ A +L Sbjct: 188 ANAI-SFMEDHYLEPLTREQIADKSGISVRHLNRIFQSYYPTTPFAYLLRLRLEHACHLL 246 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + + I EV+ + GF DS+YF R F + +GL P Y Sbjct: 247 KTTPVPITEVSYKSGFNDSNYFTRQFTKVYGLAPKVYRR 285 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 11/258 (4%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 P R+ + V S +F + + +G +++E Q L E + P Sbjct: 14 PFASERIAGVNDNM---VRSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFVM 70 Query: 84 N--LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA-MLTAL 140 + N+ P L L F P + +L AR +LP Q M L Sbjct: 71 HHSFEENDVPFRRLLLYFNPEVIRSPQI---LRTLSERARVYKLPRAQSAPIYNLMKDIL 127 Query: 141 THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTR 200 R L + L+++ L L +V ++P I N++ +++ + +T Sbjct: 128 QEQERDDLYSRELITLMVNALAL--QLVRNSDEAARPEQRNRVTDIINYLHEHFTEDITL 185 Query: 201 ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPD 260 E +A F ++ HL + F ++ + ++Y+ +R+ A+ +LQ+ SI E+++R GF + Sbjct: 186 EQLANHFYVSQYHLCREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSN 245 Query: 261 SDYFCRVFRRQFGLTPGE 278 +F RV++ G++P + Sbjct: 246 VTHFNRVYKSVTGMSPSQ 263 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 123/298 (41%), Gaps = 22/298 (7%) Query: 3 APGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNL 62 +PG P A++F ++ A +F + V G Sbjct: 31 SPGSPTRNLKKAEMFFRGDNRFSVILHPKLAIA-----QRYHTHEFFEIIYVYAGSCTTT 85 Query: 63 LEAKQQRLVEGEMLFIPARAAN-LPVNNKPVMLLSLVFAPTWLGLSFYDSR--------- 112 ++ +Q L G++LF+ + + + V++ ++ +++ P +L S + Sbjct: 86 VDGEQMVLKAGDLLFLNIQTGHVISVDSWDDIVFNILIKPDFLEQSLFHLLSENDVFLNF 145 Query: 113 -TTSLLHPARQIQLPSLQRGEGEAMLTA----LTHLSRSPLEQNIIQPLVLSLLHLC-RS 166 SL + + Q E TA + +L + P +I+ ++L+ L R Sbjct: 146 YLESLYNRTMSEKYLLFQENTDEIASTADRIVIEYLRQDPFAMKVIEAQFVTLVSLLARE 205 Query: 167 VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRF 226 P G I W+ ++YA T +S A+ F+ T ++LS L ++ F Sbjct: 206 NRRQAPTGETIPGKAFVPEILQWLSNHYAGA-TLKSTAEHFHYTTSYLSFLIKEYTGKNF 264 Query: 227 IEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + ++ ++ +A L++ LS+ ++ + G+ D+ YFCRVF+ G TP EY Q Sbjct: 265 LRIIQDFKIREAERYLKETSLSVERISDQLGYKDAAYFCRVFKNTTGATPSEYRRSQQ 322 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 11/259 (4%) Query: 31 WFASQPAS-LPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN 89 + ++ + + L ++ G + + + V G++L + + + Sbjct: 22 YHVTESHPQYAMPYHWHEELELIHIISGTFHVTINETTRNAVPGDILLVNSGGLHGGTP- 80 Query: 90 KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ---LPSLQRGEGEAMLTALTHLSRS 146 + LVF + L Y S + L I P+ ++L L L + Sbjct: 81 YDCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAGDDTAIHSLLERLFALMQD 140 Query: 147 PLEQNIIQPLVLS------LLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTR 200 E +Q L L LL R + S R +L ++ N+++ +Y + +T Sbjct: 141 SDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNVLNYIEAHYTEKITL 200 Query: 201 ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPD 260 +A+ ++ + F++ I+YV + R+ +A +L SI ++A CGF D Sbjct: 201 HELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDIAMLCGFND 260 Query: 261 SDYFCRVFRRQFGLTPGEY 279 YF R F++ G++PG+Y Sbjct: 261 VSYFTRAFKKYKGISPGQY 279 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 69/141 (48%) Query: 143 LSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 R I+ L L R + + + + ++ +N+ + ++ + Sbjct: 390 YIRELQSCTDIENLKKWFLDKTREICTKLENSKEKEAGSIIDRAKEYINENFRRDISLDD 449 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 V++ +I+P + SKLF Q FIEY+ +R+ AR +LQ LSI E+ + G+ D + Sbjct: 450 VSREVDISPYYFSKLFKQETGKNFIEYLTEIRLKNARELLQDSRLSIKEICAQSGYSDPN 509 Query: 263 YFCRVFRRQFGLTPGEYSARF 283 YF R+F++ G+TP E+ R Sbjct: 510 YFSRIFKKYEGVTPSEFRERL 530 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 104/291 (35%), Gaps = 16/291 (5%) Query: 9 DQQFFADLFSGLV--LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAK 66 DQ F L V G W+ P + V S + V+ GE ++++ Sbjct: 2 DQSFRQSLKESTVHGNERFPFGAYWYQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQIDSE 61 Query: 67 QQRLVEGEMLFIPARAANL--PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHP--ARQ 122 + GE +FI + N+ ++VF L S YD ++ P R+ Sbjct: 62 YIPVRAGEAIFIDGGDLHTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERR 121 Query: 123 IQLPS-LQRGEGEAMLTALTHLSR------SPLEQNIIQPLVLSLLHLCRSVVNMPPGNS 175 P + G E +L + + + E I L L L S S Sbjct: 122 AAFPRRMTSGTDERLLEHIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRS 181 Query: 176 QPR---GDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRW 232 + + ++Q +Y +P+ +A ++ + F ++Y+ Sbjct: 182 EAADMTRTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNS 241 Query: 233 VRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 R+ +A +L+ I ++A GF YF RVFR+ TP EY + Sbjct: 242 YRVRQAAELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 71/132 (53%) Query: 154 QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 + + L ++ R + L +++Q+NY++ ++ + V++ N++P + Sbjct: 400 EDIRTWFLEKMMQTCCSIRDKNEDRSESLVEKARSYMQENYSREISLDDVSKEVNVSPYY 459 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 SK+F + F EY+ +R+ KA+ +L+ LSI E+ G+ D +YF R+F++ G Sbjct: 460 FSKIFKEESGENFTEYLTNIRIGKAKELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTG 519 Query: 274 LTPGEYSARFQG 285 +TP EY R+ G Sbjct: 520 ITPREYRERYYG 531 >UniRef50_UPI0001B9EC7D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EC7D Length = 280 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 17/266 (6%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--V 87 ++ QP S F + G L+ L G++L + + P Sbjct: 10 TYYNEQPLSGGQF-HSHAFYEIYYFHEGRCTYLIGDSVFTLKPGDLLLMNGLTLHCPNVE 68 Query: 88 NNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA-----RQIQLPSLQRGEGEAMLTALTH 142 + + L F P W+ ++ + LL P ++ L R E E ML + Sbjct: 69 PDSRYVRSILHFDPAWICRGLSETAKSILLDPFETLRNHRMTLTGENREEFEGMLADIHR 128 Query: 143 LS------RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 LS R IQ ++ + C++ V S+ + ++V++NY Sbjct: 129 LSSSTAGFRQERMTLRIQEMMYVIADWCQAAVQDHDSISEKERH--VQHVVSFVEENYML 186 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ-KYHLSIHEVAQR 255 LT E +A+ +IT ++LS LF + +YV R+ +A+++L+ HLSI E++Q Sbjct: 187 DLTLEGIARDMHITKHYLSSLFKEVTGTTVFKYVYHRRINQAKIMLRLHPHLSITEISQA 246 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSA 281 GF +F R+F+ G TP Y Sbjct: 247 SGFKHLAHFSRMFKAMVGTTPEHYRR 272 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 69/140 (49%) Query: 146 SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQ 205 S L + L + Q + +++ +YA+PLT E VA+ Sbjct: 373 SFASCRSAAELKRAALDELDRIAADLEVWRQQQAYGKLGKAKDYIDRHYAEPLTLEEVAE 432 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 I+P + SKLF +H + FI+YV VR+ +A+ L + S+ E+ G+ D +YF Sbjct: 433 QAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAETDQSLKEICFSVGYNDPNYFS 492 Query: 266 RVFRRQFGLTPGEYSARFQG 285 RVF++Q GL+P EY + Q Sbjct: 493 RVFKKQTGLSPSEYRKKVQA 512 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 107/272 (39%), Gaps = 17/272 (6%) Query: 27 LGRVWFASQPASLP----VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 + R+ F G D + ++ GE ++ + R+ G+++ IP Sbjct: 10 IRRMLFIEAAKQPGRFSMDGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNV 69 Query: 83 ANLPVNN----KPVMLLSLVFAPTWLGLSFY--DSRTTSLLHPARQIQLPSLQRGEGEAM 136 + + +P + + F + + L ++L + ++ + + Sbjct: 70 LHKTSPSGKLSQPHERILVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQL 129 Query: 137 LTALTHLSRSPL--EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD-----FLYHSICNW 189 L + + + Q L+ LL + N P + G + + Sbjct: 130 LARMLAEQKQQAGGYEEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARY 189 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 + +Y + L+ +A F+++P +LS LF + + + Y+ VR+ +A +L++ L + Sbjct: 190 INAHYDENLSLSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPV 249 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 E+A R G+ +F RVF++ ++P Y Sbjct: 250 TEIAYRVGYQSGTHFGRVFKKAKAVSPQSYRR 281 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 176 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 107/281 (38%), Gaps = 17/281 (6%) Query: 22 LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 Q G W+ P + D L GE ++ + GE +FI Sbjct: 17 NERQPFGTYWYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGAGEAVFIDGG 76 Query: 82 AANLPV--NNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHP--ARQIQLPSLQRGEGEAML 137 + ++ SLVF L + YD+ +L+ P R+ P R E A L Sbjct: 77 DIHAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRETAADL 136 Query: 138 TALTH---LSRSP------LEQNIIQPLVLSLLHLCRS--VVNMPPGNSQPRGDFL--YH 184 + L H L RS E + L L L + + VN +S+ + Sbjct: 137 SLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKIDRLK 196 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 ++ +Q NY+ P+ +A ++ + F ++Y+ R+ +A +L++ Sbjct: 197 TVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAELLRE 256 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 I ++A GF + YF RVFR+ +P E+ R Q Sbjct: 257 PERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQA 297 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 112/266 (42%), Gaps = 17/266 (6%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVML 94 + P G C +F + I+ G+ ++ LV G+ I + +N + L Sbjct: 26 RDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVTGDTFVIGGDRPHDYLNMDQLSL 85 Query: 95 LSLVFAPTWLGLSFYDSRTTSLLHPA--------RQIQLPSLQRGEGEAMLTALTHLS-- 144 ++++F P L LS D ++ S H ++ Q S + ++ L ++ Sbjct: 86 INILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRHQFTSRLQLNPAELIETLRYVESL 145 Query: 145 ------RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPL 198 RS + + +L L+ S + N + + + +Q ++ +P+ Sbjct: 146 DQELKQRSAGFRTMATLTMLQLVTFL-SRCYIRTRNPESKKLLRIAEAISHIQRHFDRPI 204 Query: 199 TRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGF 258 + + + + ++ + + F I+Y+ VR+ +A +L+ SI ++A GF Sbjct: 205 SLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQEASRLLRSTDRSITDIAFDVGF 264 Query: 259 PDSDYFCRVFRRQFGLTPGEYSARFQ 284 DS+YF R FR GL+P EY + + Sbjct: 265 SDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 15/264 (5%) Query: 34 SQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP-V 92 + + + F L V RG N + EGEML + A+ P Sbjct: 62 PENVNPKMLLHKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPNTAHCPETLTDQD 121 Query: 93 MLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL--------PSLQRGEGEAMLTALTHLS 144 + +++F + S + L + ++ L G+A + L Sbjct: 122 CVFNIMFRQNFFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLPGKASADTIERLI 181 Query: 145 RSPLEQN-----IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 E+ I Q L++ L + + + L I ++Q++ A+ +T Sbjct: 182 VECFEKQSCYETITQSLLVELFAYLARNSDNSFSYPKNNHERLILKIITYIQESPAE-IT 240 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 + V++ F + +LS++ Q+ F E VR R+ KA+ L+ LSI ++A G+ Sbjct: 241 LQKVSEQFQYSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLSILDIALILGYN 300 Query: 260 DSDYFCRVFRRQFGLTPGEYSARF 283 D +F +VF+++ G TP EY + Sbjct: 301 DVSHFYKVFKQEIGCTPTEYRKHY 324 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 112/262 (42%), Gaps = 18/262 (6%) Query: 39 LPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLV 98 +P DF L IVL G +++ +++ + +G++ ++ + +++++ Sbjct: 28 MPEH-FHHDFFELVIVLNGTATHIVNSEEFFIKKGDVFVFNMDLSHGYKDPHNFKIINIM 86 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLT----ALTHLS---------- 144 + P L D + + ++ ++ L+ +L +++ Sbjct: 87 YKPERLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNTLSLSISSLEYVAELGARINEEY 146 Query: 145 --RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 + Q +I + ++ + L +I +++DNY P+ E Sbjct: 147 KRKDQGYQTMIYARFMEMVVYLSRQYIIENKLLHDTFVHLAKAIL-FLEDNYLNPIKLEK 205 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 +A +++ H +++F ++ + +R+ A +L+ +L I ++A GF DS+ Sbjct: 206 LADEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACSLLKNSNLCIADIALESGFSDSN 265 Query: 263 YFCRVFRRQFGLTPGEYSARFQ 284 YF R F++ G+TP EY AR++ Sbjct: 266 YFSRQFKKITGITPKEYRARYK 287 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 14/239 (5%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGL 106 D + +V+ G+ + L EG++ ++ + + W+G Sbjct: 41 DHYLIHLVVAGKGVYQVGGVSHTLQEGDLFLAKPNQLITYAADE-----TDPWEYYWVGF 95 Query: 107 S------FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL 160 + S LHP + P R + L+ E + L + + Sbjct: 96 NGACANKLVQQTPFSDLHPVHHCKDPQAVREALYNI--YLSRGPEPQCEALMTGYLYIFM 153 Query: 161 LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQ 220 HL + + P ++ +I ++Q NY+ ++ + +A+ ++ +HL ++F Sbjct: 154 AHLMKEARDAMPNVGSSSSQYVLSAIK-YIQFNYSHDISVDDIAKAVGVSRSHLYRVFMA 212 Query: 221 HGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + I+Y+ R+++A +L+ +LSI E+A GF D YF RVF++ G+ P +Y Sbjct: 213 NVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPPSKY 271 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 16/257 (6%) Query: 41 VGSLCIDFPRLDIVL--RGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLV 98 L+ + G + + L GE FI + + + P + ++V Sbjct: 30 FSVSQHWHEELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGELHEIKSGGPSLHHAIV 89 Query: 99 FAPTWLGLSFYDSRTTSLLHP--ARQIQLPSLQR----GEGEAMLTALTHLSR------- 145 F P L + YD S + P + + P+L E + +L + + R Sbjct: 90 FNPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVFSPEESQMILFHMQEIIRLYHTLPS 149 Query: 146 -SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 + L I +L L + + + + ++ +NYA P++ +A Sbjct: 150 CASLSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEYIHENYAGPISLPDLA 209 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 + ++PN+ F Q I ++ R+ KA IL L + +VA GF + YF Sbjct: 210 KICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPVSQVAISVGFDNFSYF 269 Query: 265 CRVFRRQFGLTPGEYSA 281 R FR +TP EY + Sbjct: 270 IRKFREYKNVTPTEYRS 286 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 101/259 (38%), Gaps = 14/259 (5%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPV 92 +PV + V +G ++ + GE + + + ++ + Sbjct: 77 DFRQVPVHWHEDM--EIIAVKKGRGVVTVDMEPYEARAGEAVVVFPGQLHGISQCGSEAM 134 Query: 93 MLLSLVFAPTWLGLSFYDSRTTSLLHP--------ARQIQLPSLQRGEGEAMLTALTHL- 143 +++F P+ L + D T L P I G + L L Sbjct: 135 EYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLPDYGAFMECIGILDQLC 194 Query: 144 -SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 ++ Q ++ + L L + + + +++++Y + +T E Sbjct: 195 GKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRLLEYMEEHYGEKITVED 254 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 A+ + +H K F Q+ + FI+Y+ R+ KA +L + VAQRCGF + Sbjct: 255 GAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPDPVTAVAQRCGFDNIS 314 Query: 263 YFCRVFRRQFGLTPGEYSA 281 YF R+FRR++G TPGEY Sbjct: 315 YFNRLFRRKYGKTPGEYRK 333 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 105/265 (39%), Gaps = 17/265 (6%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV----NNKP 91 S + + + + RG+ + + +++ I + + + Sbjct: 35 DTSWHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKFIVKSESGCE 94 Query: 92 VMLLSLVFAPTWLGLSFYDSRTTSLLHPAR------QIQLPSLQRGEGEAMLTAL--THL 143 ++LS F + G + D + L I L Q+ + +L + Sbjct: 95 FIVLSFKFVNRFDG-QYSDVSLENFLDFVSGKETGPFITLKVSQKNDIIVLLNRILKERE 153 Query: 144 SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNS----QPRGDFLYHSICNWVQDNYAQPLT 199 + + + LV+ L L + M NS P+ L + N++ +NY + ++ Sbjct: 154 NPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYERDIS 213 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 + +A++ ++ ++ ++ F + + I Y+ +R+ +A+ +L+ I ++A GF Sbjct: 214 LKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALSVGFS 273 Query: 260 DSDYFCRVFRRQFGLTPGEYSARFQ 284 + F +F++ LTP +Y Q Sbjct: 274 NQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 13/251 (5%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL--PVNNKPVMLLSLVFA 100 + +F + +L G + + +GE++ I A + ++ + + F+ Sbjct: 23 AHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHRTTYISGGSHERICITFS 82 Query: 101 PTWLGLSFYDSRTTSLLHPARQ--IQLPSLQRGEGEAMLT------ALTHLSRSPLEQNI 152 ++L F + ++L Q +++P +R E +++ L + Sbjct: 83 KSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKAHREMMYQDTYSLYLASSH 142 Query: 153 IQPLVLSLLHL--CRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNIT 210 + L+L +L L ++ P ++ P D + ++ NY P+T E A + N++ Sbjct: 143 VYELILFILRLNSISKQDDITPYDASPD-DQIMEKAAKYICSNYQSPVTLEETAAYCNMS 201 Query: 211 PNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRR 270 + SK F F EY+ +R+ +A +L L I E+A GF DS+YF VF+R Sbjct: 202 TTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIALLSGFNDSNYFGDVFKR 261 Query: 271 QFGLTPGEYSA 281 G++P +Y Sbjct: 262 MKGISPCKYRK 272 >UniRef50_C4LCV7 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCV7_TOLAT Length = 275 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 104/250 (41%), Gaps = 5/250 (2%) Query: 40 PVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVF 99 P C DF L +V G ++ + + + G ++++ + + + L +++F Sbjct: 26 PFPEHCHDFHELVLVKSGCGIHVCDGRAIHVSRGSVIYLKDEDVHCFDHMDNLCLTNVLF 85 Query: 100 APTWLGLS--FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLS--RSPLEQNIIQP 155 P S T S + Q+ + + + E +LT + + + +++ Sbjct: 86 MPDEFHSSPHLTSLLTESCRSDSGQMMVCPQIQQQAELLLTQIHDENDRQDAYSSLMVET 145 Query: 156 LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 L L L + D L + I N++ +NY L ++ FNI L+ Sbjct: 146 LFSQLAVLLWRDRQLNKKYRSEEQDNLINLI-NYINENYQNELNWSELSDSFNIPLRTLN 204 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 + +H + Y+ VR+ A +L ++ ++A CGF DS+YF F + F +T Sbjct: 205 RKLQEHTGLTPNNYLGRVRLCHASYLLSHSQDAVTDIAFSCGFNDSNYFSSKFHQAFNVT 264 Query: 276 PGEYSARFQG 285 P +Y R++ Sbjct: 265 PMQYRKRYRN 274 >UniRef50_A8FAK6 AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK6_BACP2 Length = 352 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 119/260 (45%), Gaps = 21/260 (8%) Query: 39 LPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLV 98 +P S DF + VL E +E K+ L G++ FIP + P+ + + + ++ Sbjct: 91 MPQLSAIHDFFEMIYVLENEMYVEVEDKKMALKSGDIAFIPPNTLHKPIVMENTIAIQIM 150 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI------ 152 + F+ + H + L +L E + +L +HL ++ ++ ++ Sbjct: 151 IRKSTFQKVFFKMLKGN--HVISEFFLNALYIKENKNILIFHSHLDKNLVDCSLQLFTEN 208 Query: 153 ------IQPLVLSLLHLCRSV------VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTR 200 Q ++ +L + + +M + D + ++Q + +T Sbjct: 209 YNRFPGYQLIMNNLFEILLCLLLRFKPSHMNVNQVKQYRDIRMIQMLQYIQQ-CCEHITI 267 Query: 201 ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPD 260 + +A+ FN++P++LSK A+ F E + +R+ KA ++ +L I+++A G+ + Sbjct: 268 QEMAEEFNLSPSYLSKYIARKLGKSFREIRQEIRLEKACEMITSSNLQINDIATAVGYQN 327 Query: 261 SDYFCRVFRRQFGLTPGEYS 280 ++F R+F++++ LTP +Y Sbjct: 328 VEHFIRLFKKKYHLTPHQYR 347 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 98/241 (40%), Gaps = 10/241 (4%) Query: 45 CIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWL 104 D + +V G ++ G++LF + + + S L Sbjct: 4 HEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSC------L 57 Query: 105 GLSFYDSRTTSLLHPARQIQLPSL----QRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL 160 G+S + ++ P L Q + L+ + ++ L ++ Sbjct: 58 GVSDFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAPCVLDQLTCAI 117 Query: 161 LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQ 220 L + +P+ + L ++ ++ +Y + +T +S+A N P +L+ F + Sbjct: 118 LCKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAFRE 177 Query: 221 HGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 H ++Y+ R+ +A+ +L SI E+A CG+ +S+YF VF+R G+TPG+Y Sbjct: 178 HIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYR 237 Query: 281 A 281 Sbjct: 238 R 238 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 9/249 (3%) Query: 42 GSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN--NKPVMLLSLVF 99 + D + +L GE ++ + + G ++ I + + + + + + L F Sbjct: 30 SNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVHRTTDADTQDHVRVLLNF 89 Query: 100 APTWLGLSFYDSRTTSLL--HPARQIQLPSLQRGEGEAMLTALTHL--SRSPLEQNIIQP 155 + +L S Y L + I S ++ E +L + H +S Q +Q Sbjct: 90 SKDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLLDKMIHEIEHQSTGFQVALQA 149 Query: 156 LVLSLLHLCRSVVNMPPGNSQPRGDFLYH---SICNWVQDNYAQPLTRESVAQFFNITPN 212 L++ LL + + ++ I ++ NY PLT SVAQ F ++ Sbjct: 150 LLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINTNYQTPLTLSSVAQNFFVSQY 209 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 +LS+ F Q F+EY+ +R+ +A+ +L++ + + ++++ GF +F RVF+ Sbjct: 210 YLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVGFGSISHFGRVFKEVT 269 Query: 273 GLTPGEYSA 281 +P Y Sbjct: 270 RFSPLNYRR 278 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 173 bits (438), Expect = 7e-42, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 114/268 (42%), Gaps = 12/268 (4%) Query: 21 VLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 NP+ + + + P +F + I+L GE +++ +Q G + Sbjct: 8 TFNPE-ILYAFDPWNEETHPYNCHHHEFLEISILLEGESEYIVQGQQYHATAGTVFLFNP 66 Query: 81 RAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL 140 R + L + L L + + + L L E + Sbjct: 67 RTEHGEQQKAGTYSHQLHIGISNLYLEGLARNVFP--NKSALLDLSHLHGAFLEKAWQIV 124 Query: 141 THLSRSPLEQNI-IQPLVLSLL-HLCRSV-------VNMPPGNSQPRGDFLYHSICNWVQ 191 L+ +E + I+ LV+ LL ++ RS+ + ++ R L + +++ Sbjct: 125 HELNHQEVESALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTIYYLE 184 Query: 192 DNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHE 251 ++ + +T E +A+ +TP +LSK F + I Y+ +R+ A+ +L+ LS+ E Sbjct: 185 THHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKE 244 Query: 252 VAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 VA+ G+ D+ +F ++F++ +G +P ++ Sbjct: 245 VAKTVGYEDAYHFSKLFKKYYGKSPSQF 272 >UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NB22_9BACT Length = 297 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 109/278 (39%), Gaps = 20/278 (7%) Query: 24 PQLLGRVWFASQPASLP---VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 P + RV ++ L DF L I+ G +++ + + G++ I Sbjct: 19 PVAVKRVAASNAAQHLHDLTTEPHRHDFAELVIITAGNGVQVVDGGEYAVSLGDVFLIQG 78 Query: 81 RAANLPVNNKPVMLLSLVFAPTWLGLSFYDSR--------------TTSLLHPARQIQLP 126 A+ + V ++++++ P L L F R S ++L Sbjct: 79 NGAHYFLERNRVSMINVLYDPARLPLPFGWLRRLPGYNVIFELEPSVRSAETFKHHLKLS 138 Query: 127 SLQRGEGEAMLTALTHLSRSPLEQNIIQPL--VLSLLHLCRSVVNMPPGNSQPRGDFLYH 184 + + E ++ L + +L L+ + PP + Sbjct: 139 AAELAEAVEIVGKLERELEQDTPGAELAAFQRLLELIVFISRCYDAPPAENLAAV-MRVG 197 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 I + ++ + + E +A+ +PN+L +LF ++Y+ VR+ +A L+ Sbjct: 198 RIISLLESEFMREWRLEELAKLAATSPNNLLRLFRTVTGTSPVDYLIRVRLRRAAEALKN 257 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 ++ E+A CGF DS+YF R FR +G++P E+ R Sbjct: 258 TPGAVAEIAADCGFADSNYFARKFRAAYGVSPREFRKR 295 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 110/263 (41%), Gaps = 22/263 (8%) Query: 42 GSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL--PVNNKPVMLLSLVF 99 + C D+ ++ V +G + + ++ + + +G++ IP + ++ + + F Sbjct: 45 WTHCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEF 104 Query: 100 APTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA----------------LTHL 143 P+++ F + T ++ + ++ +T + + Sbjct: 105 MPSFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYE 164 Query: 144 SRSPLEQNIIQPLVLSLLHLCRSVVN----MPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 R+P Q ++ +L LL + VN + + + + + ++Y + + Sbjct: 165 RRTPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMN 224 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 + N++ + LF + F Y+ +R+ +A M+L++ LS+ +V GF Sbjct: 225 LNDLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFN 284 Query: 260 DSDYFCRVFRRQFGLTPGEYSAR 282 + YFCR+F++ G++P ++ + Sbjct: 285 ELSYFCRIFKKYTGISPTDFRKQ 307 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 12/238 (5%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGL 106 D + +V+ G+ + + + EG++ F ++ + +W+G Sbjct: 41 DHYLIHLVVSGKGIFEVGGRTWEVSEGDLFFARPSQLIRYTADE-----QQPWEYSWVGF 95 Query: 107 SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRS-----PLEQNIIQPLVLSLL 161 + + + P P + + M ALT++ S E ++ L L + Sbjct: 96 NGACAHKLAAQLPFTD-DAPVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMVGYLYLFIA 154 Query: 162 HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQH 221 L R P + ++ ++I ++Q NY+ ++ + VA+ ++ +HL ++F + Sbjct: 155 ALMRETSAGKPHTASSSSQYVLNAIK-YIQFNYSHDISIDDVAKSVGVSRSHLYRVFMLN 213 Query: 222 GTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 I+Y+ R+ +A +L+ +LSI EVA GF D YF RVF+R G+ P +Y Sbjct: 214 VGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVPPSKY 271 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 94/248 (37%), Gaps = 7/248 (2%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN-NKPV-MLLSLV 98 S + G + + G+++F+ + + PV +++ Sbjct: 17 AESHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPVNERVTIS 76 Query: 99 FAPTWLGL--SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQP- 155 F +L + ++ +P+ R E ++ + + + + Sbjct: 77 FDGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEYEETGQDGFSPLMKK 136 Query: 156 --LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 L+ L R G+ + ++ D+Y P+T E VA+ +++P + Sbjct: 137 GCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLEEVAELSHMSPAY 196 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 S+ F + EY+ +R+ +A +L S+ E+A RCGF D +YF FR+ G Sbjct: 197 FSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAFRKAKG 256 Query: 274 LTPGEYSA 281 ++P + Sbjct: 257 VSPRAFRK 264 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 115/309 (37%), Gaps = 26/309 (8%) Query: 1 MKAPGLPADQQFFADLFSGLVL--NPQLLGRVWFASQPASLPVGS-----LCIDFPRLDI 53 +K P + Q A+ + +P + RV S DF L + Sbjct: 5 IKNPNKESGQGVVAEGINYFDNPYHPLTVRRVKAGSDSEITHEHDLTEVRHTHDFCELAL 64 Query: 54 VLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRT 113 + RG + LE + + G++ + + ++ + + + +++++F P L L R Sbjct: 65 ITRGSAMHWLEGAEFPITAGDVFVLQGQQSHYYYDLQKLEMINIMFDPEQLNLPETRLRK 124 Query: 114 TS------LLHP--------ARQIQLPSLQRGEGEAMLTALTHLSR---SPLEQNIIQPL 156 LL P + L E + L + R E + Sbjct: 125 IPGYRALFLLEPLFRKQHRFTSHLHLSRSTLAHSERIAVELDNEVRGKMEGYEAAMFAKF 184 Query: 157 VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSK 216 V +++L R N++ + ++D + +P E A +++ + + Sbjct: 185 VELVVYLSRLYQETESTNAEAL--LRVAKVIGSIEDEFTKPWKVEDFAAMAHMSRANFMR 242 Query: 217 LFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 +F I Y+ +R+ K+ +L LSI E+A GF DS+Y+ R F+ G++P Sbjct: 243 VFRTATGETPINYLLQLRIQKSMTLLTSTKLSISEIAFEVGFNDSNYYTRQFKASQGISP 302 Query: 277 GEYSARFQG 285 Y G Sbjct: 303 LAYRRTHTG 311 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 122/281 (43%), Gaps = 10/281 (3%) Query: 6 LPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEA 65 L ++ +F ++ L + L ++ + + ++ GE ++ Sbjct: 3 LNSNYEFLNEMLQHLQV---HLEEAYYTQCSPQWRELDYIPSYNKFYLICEGEGWLNIDG 59 Query: 66 KQQRLVEGEMLFIPAR--AANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQI 123 + R V G+++ +PA + V+++P F T + + + Sbjct: 60 QDYRPVPGQLVHMPAHVLQSYSAVSDRPYSKYWCHFTATMGEMDLFQWLEIPPILDISPD 119 Query: 124 QLPSLQRGEGE--AMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF 181 SL + E + ++L+R E+ I+ ++ L + + PG Sbjct: 120 HTDSLTKLFRELVELYQNRSYLAR-IREKAILLEIIALFLSHSDTHLKFVPGRLGEIER- 177 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 I +++ N ++ LT E +A+ ++ PN+L + F +H + ++Y+ RM KA+ + Sbjct: 178 -LKQIEAFIEANLSEALTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAKSL 236 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L L+I E+A+ GFPD+++F + FR++ +P EY R Sbjct: 237 LGTTDLAIKEIAELVGFPDTNHFAKAFRKEASCSPTEYRHR 277 >UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME6_9FIRM Length = 323 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 121/283 (42%), Gaps = 14/283 (4%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDF-PRLDIVLRGEYGNLLEAKQQRLVEGE 74 + S PQ + + + S I + + G +E + G Sbjct: 37 MVSEYTYCPQTDFFIERLDRDKGPDMPSFHIHHKFEIYYEIAGTCRYFVEGAAYIVNAGS 96 Query: 75 MLFIPARAANLPVN--NKPVMLLSLVFAPTWL---GLSFYDSRTTSLLHPARQIQLPSL- 128 ++ I + + + P + + F+ +L +F + S L R L ++ Sbjct: 97 VVMIGENQIHKTASLGDSPSSRIVVNFSREYLEKVAAAFPEVDFFSFLTDERNHLLSAIT 156 Query: 129 --QRGEGEAMLTALTHLS--RSPLEQNIIQPLVLSLLHLCRSVV---NMPPGNSQPRGDF 181 Q+ +++L + L SP +Q + L+ +LL +++ G + Sbjct: 157 VKQQNHIQSILQQMLDLEGETSPEDQALRAMLLATLLLELKALCVQQQCQGGEKGRVSNH 216 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 + I ++ +YA+ LT +A F I+P +LS+LF + + IEY+ VR+ A+ + Sbjct: 217 IVEQIQAYIAQHYAEKLTLTGIASQFYISPYYLSRLFKKSTNLSLIEYINGVRIKAAQNL 276 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ++K SI VA + GF + +F RVF+ GL+P +Y +++ Sbjct: 277 IEKSGESISSVAGQTGFMTTAHFRRVFKDATGLSPQQYRQQYK 319 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 108/273 (39%), Gaps = 12/273 (4%) Query: 19 GLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI 78 G NP + + A + +PV D + V G + + G+ + Sbjct: 25 GTKDNPFSIYHIENAGRSFQIPVHW--HDEFEIIYVKSGLLTVSISGESYIGKAGDAFVV 82 Query: 79 PARAANLPVNN-KPVMLLSLVFAPTWLGLSFYDSRTTSLLHP--ARQIQLPSLQRGEGEA 135 +L + V + +F ++ D LL P + + + + + Sbjct: 83 SPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMINPRVKDSAKE 142 Query: 136 MLTALTHLSRSPLEQNIIQPLV-----LSLLHLCRSVVNM--PPGNSQPRGDFLYHSICN 188 + L + + ++ + + LL + N + + + + Sbjct: 143 LCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDTSGRNIVEKEMVS 202 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++Q N+ ++ + + F+++ ++S+ F +H + +Y+ ++R+ A+ +LQ LS Sbjct: 203 YIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAKQLLQDTDLS 262 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + E A + G+ + YF R F++ +G++P +Y Sbjct: 263 VTETAMQSGYQNVSYFIRSFKKAYGISPLKYRN 295 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 106/263 (40%), Gaps = 22/263 (8%) Query: 32 FASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VNN 89 +A S DF L +L GE +++E + L + + P + + Sbjct: 19 YAEGVNDNMTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKD 78 Query: 90 KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGE--AMLTALTHLSRSP 147 P + L F+P + T L +++ + + ++L +LTH P Sbjct: 79 MPFKRIVLYFSPDLIAND-----TICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVP 133 Query: 148 LE------QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRE 201 + N + L+L++L L V P + +++ ++Y + ++ Sbjct: 134 GKYHDAYICNQLNGLLLNMLRLDFEAVKSIPKTRSAK-------AVDYIHNHYMEDISVN 186 Query: 202 SVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDS 261 +A+ ++P HL F I+Y+ R+ A+ ++ + +I ++++ GF + Sbjct: 187 QLAEILYVSPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNL 246 Query: 262 DYFCRVFRRQFGLTPGEYSARFQ 284 +F R F++ G+ P E +Q Sbjct: 247 THFNRTFKKITGVAPREKKKLYQ 269 >UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIX6_9CLOT Length = 330 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 115/257 (44%), Gaps = 19/257 (7%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP-VNNKPVMLLSLVFAPT 102 DF L V +G N+ + L EG++L + A + P + ++++++ P+ Sbjct: 71 HNHDFFELLYVYKGSCVNMTREGEMPLNEGDLLLLNPNALHAPFAPGEENIVVNIIVRPS 130 Query: 103 W-------------LGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL--THLSRSP 147 L +F+ + + + P + + ++ L +LS Sbjct: 131 VFENVMLSLIADNKLFSNFFVNYLYHINMTTSYLYFPKDEEHPIKFIMDMLIAEYLSHDI 190 Query: 148 LEQNIIQPLVLSLLH-LCRSVVNMPPGNSQP-RGDFLYHSICNWVQDNYAQPLTRESVAQ 205 N++Q +++ L L RS M + L I + + N A +T + +++ Sbjct: 191 CYTNVMQAILVQLFAALARSYRKMNKVEIEDFEKSQLVVDIISHINQNIA-TVTLKELSE 249 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 F + +++SKL + F E V ++R+ +A+ L+ L+I E+ Q GF DS+YF Sbjct: 250 RFQYSSSYISKLINSYTGKNFSEIVHFLRLDRAKKYLENKDLTITEITQAVGFSDSNYFY 309 Query: 266 RVFRRQFGLTPGEYSAR 282 +VF+ +F L+P EY + Sbjct: 310 KVFKNRFNLSPSEYRKQ 326 >UniRef50_UPI000197C3B0 transcriptional regulator, AraC family protein n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C3B0 Length = 285 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 106/254 (41%), Gaps = 12/254 (4%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVML 94 + + +F IV G + + G++ +I A + + + L Sbjct: 26 RDSQEDFIVHSHNFNEFVIVFSGNGLHHWNGIDYPITCGDLFYINAEDCHGYHSVNNLKL 85 Query: 95 LSLVFAPTWLGLSFYDSRTTSLLHP---ARQIQLPSLQRGEGEAMLTALTHLSRSPL--E 149 +++++ P + + L + +R +LP ++ + + P Sbjct: 86 VNVLYKPNEFFIKKSIEKYVPLSYQPITSRHWKLPPSSLSTLTPIIEKMALECQKPDIPS 145 Query: 150 QNIIQPLVLSL---LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQF 206 ++ + L L L ++ R + P + + D L + + + ++ + E AQ Sbjct: 146 IHLCEGLFLQLAIYIYRLRYQPDQAPISLLHQMDQLINCLNLSINTSF----SLEKFAQE 201 Query: 207 FNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCR 266 ++ L +LF M +EY++ +R+ +A ++L+ LSI EVA +CG+ DS+YF Sbjct: 202 HQMSARSLQRLFKSKTGMTVMEYLQQLRLCQAALLLRSTSLSISEVAGQCGYEDSNYFSS 261 Query: 267 VFRRQFGLTPGEYS 280 VF ++ +T Y Sbjct: 262 VFHKKMKMTASAYR 275 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 109/258 (42%), Gaps = 19/258 (7%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN---LPVNNKPVMLLSLVF 99 DF + +L G + + + EG+++ + + + P + Sbjct: 32 YHSHDFIEMAFILSGHGKYKIADRLYDVSEGDIIILNPGQKHQALCTDPSNPATEFFVGL 91 Query: 100 APTWLG-------------LSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRS 146 G L+ + + +LH + +++ + ++ + R Sbjct: 92 CDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAMSVENDVCRSGRY 151 Query: 147 PLEQNIIQPLVLSLLHLCRSVVNMPPGNS--QPRGDFLYHSICNWVQDNYAQPLTRESVA 204 + ++ + +++ LL V + G S ++ I N+ +D+Y++ ++ + +A Sbjct: 152 IMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFEDHYSEKISLDQIA 211 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY-HLSIHEVAQRCGFPDSDY 263 + ++P ++S++F I ++ +R+ KA+ +L+ SI EVA + G+ D + Sbjct: 212 ENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQEVAAKVGYDDVYH 271 Query: 264 FCRVFRRQFGLTPGEYSA 281 F ++F+++FG+ P + Sbjct: 272 FSKLFKKRFGMPPSKIRR 289 >UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIE9_9CLOT Length = 361 Score = 170 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 109/265 (41%), Gaps = 17/265 (6%) Query: 37 ASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN-LPVNNKPVMLL 95 + +F L V G + ++ RL +G + + A+ + + + L+ Sbjct: 88 SHFKEYLHSHEFFELFYVYSGTCHCYFDGREFRLPKGTIWIFNTQCAHNVYLPDDRTNLV 147 Query: 96 SLV-----FAPTWLG--------LSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 +++ F+ LG LSF+ + + +Q+Q + G E + + Sbjct: 148 NILLRKSTFSAALLGMINDNDLFLSFFLNSIYNSDSAPKQLQFTTEPGGMSEFYIFKIIE 207 Query: 143 LS--RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTR 200 +SP Q+I++ L LL N + +++ DNY T Sbjct: 208 EYAGKSPYSQSIMKHLFCCLLAELTRQYRERADNRGRESGLHISQVISYISDNYRIA-TL 266 Query: 201 ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPD 260 +S A+ F+ P++LSK +H F EY+ ++ KA +L L + VA G+ + Sbjct: 267 QSTAEHFHYNPSYLSKYMLKHTNQTFSEYLTRFKLEKAAHLLTSTALPLERVASLTGYSE 326 Query: 261 SDYFCRVFRRQFGLTPGEYSARFQG 285 F + F++ GLTP +Y ++ Q Sbjct: 327 RSAFDKAFKKFSGLTPRQYRSQKQA 351 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 109/274 (39%), Gaps = 12/274 (4%) Query: 19 GLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI 78 G +P + A Q +PV D + V G + + G+ + Sbjct: 12 GTKDDPFSTYHIENAGQSFQIPVHW--HDEFEIIYVKSGFLTVNISGENYIGKPGDAFVV 69 Query: 79 PARAANLP-VNNKPVMLLSLVFAPTWLGL---SFYDSRTTSLLHPARQIQLPSLQRGEGE 134 + V + +F ++ D R L R + PS++ E Sbjct: 70 SPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPSVKDTIKE 129 Query: 135 --AMLTALTHLSRSPLEQNIIQPLV--LSLLHLCRSVVNM--PPGNSQPRGDFLYHSICN 188 L + +S E NI + + LL + N+ + + + + Sbjct: 130 LCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGRNIVEKEMVS 189 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++Q N+ ++ + + F+++ ++S+ F +H + +YV ++R+ A+ +LQ +S Sbjct: 190 YIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDIS 249 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + E A R G+ + YF R F++ +G++P +Y + Sbjct: 250 VTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKK 283 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 99/247 (40%), Gaps = 8/247 (3%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN-KPVMLLSLVFAPT 102 + + + RG ++ + +L EGE LF+ + + + + K + ++VF Sbjct: 39 HWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVNSGSIHSGLEMIKRSIGYAIVFDLR 98 Query: 103 WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLS--L 160 L D P + E + + + E++ L + L Sbjct: 99 LLYSEEPDYCKHEYFLPLINKRYHIPSNLNDEHIRNDICRIIEVFKEKSYGYELYIKSLL 158 Query: 161 LHLCRSVVNMPPGNSQPRGDF-----LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 + V G + N++ NY + L+ + +++ +++ +L Sbjct: 159 FDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLC 218 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 +LF + M +EY+ VR+ KA +L +S+ E+A CGF + YF +VF++ T Sbjct: 219 RLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTT 278 Query: 276 PGEYSAR 282 P ++ + Sbjct: 279 PLKFRKQ 285 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 13/268 (4%) Query: 22 LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 L P+ +V+ P ++P+ +F L V+ GE + L L G + + Sbjct: 16 LQPRAPVQVFHGIHPGTIPLHW--HEFYELSYVVGGEGEHRLNGSAYPLSSGTLFLLTPA 73 Query: 82 AAN--LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA 139 + + V +KP+ + +++F + + Y L QL +Q + A Sbjct: 74 DFHELVSVEDKPLEIYNVIFTEAMMDDNLYHWLFGGKL--VLHAQLEEMQHRQIFADYER 131 Query: 140 LTHLSRSPLE------QNIIQPLVLSLLHLCRSVVNMPPGNSQPRG-DFLYHSICNWVQD 192 + + + E + +Q L++ L + +P + R + ++ Sbjct: 132 MREETGASREGSEIAIRATLQRLLVDLNRGSTANCALPTNGTGNRQLNVNLQRALIYIHH 191 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 ++ + L E A + + S+ F++ F Y++ VRM A +L+ L + E+ Sbjct: 192 HFREDLRLEDAAAQAQYSATYFSECFSKSVGQSFQRYLQNVRMQFAESLLRVSSLPVTEI 251 Query: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 GF +F RVFR++ G++P +Y Sbjct: 252 CYASGFNTLGHFERVFRQRKGMSPRQYR 279 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 21/267 (7%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN-LPVNNKPVML 94 + + DF L V +G N+++A + L +G++ + A A + L K + Sbjct: 69 NIPMALAPHKHDFFELIYVYQGSVINVVDAHEVVLQQGDLCIMNASAVHTLGKLGKQDTV 128 Query: 95 LSLVFAPT------------------WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 +++ P + S Y + PS Sbjct: 129 YNILIKPELFNQAFLGLIAENEIISSFFLNSIYQKSISRNFMTFHTQDFPSDDAETYVHR 188 Query: 137 LTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQ-PRGDFLYHSICNWVQDNYA 195 L H ++I LV + L R + NS G I ++ D+Y Sbjct: 189 LIMENHFKDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSIELGMSNVSQIIAYISDHY- 247 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 + ++ + VA F+ PN+LS L ++ F E ++ +R A+ LQK + I+E+ Sbjct: 248 KDISIKQVADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTAAKEYLQKLDIPINEIVYM 307 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSAR 282 G+ + +F R F+++ G+TP +Y + Sbjct: 308 VGYTNKSHFYRTFKQEMGITPAQYRKQ 334 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 108/273 (39%), Gaps = 11/273 (4%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 + G+ P V + DF + IV G ++ + L G + Sbjct: 14 VLQGIDFFPSGAASVTIEPRLPQAAFPEHHHDFWEIVIVEHGTGTHVFNGQPYTLSGGSV 73 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLL-----HPARQIQLPSLQR 130 F+ +L + + + L ++++ SF L H ++ Sbjct: 74 CFVRDHDRHLYEHTENLCLTNVLYRSPQ-AFSFLSGLEKLLPQEQDGHYPSHWRVSQQTL 132 Query: 131 GEGEAMLTALTHLSRSPLEQNI--IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICN 188 + ++ L L + ++ L + LL L RS M G D + + Sbjct: 133 HQASPLVERLEALRECSDVHAVASMEMLFMQLLILLRSGSQMQGGG---HADERLNQLIA 189 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 W++D+YA+ + E +A ++ L + Q + Y+ +R+ KAR +L+ S Sbjct: 190 WLEDHYAEEVCWEQLADKHMLSLRTLHRQLKQRTGLTPQRYLNRLRLMKARYLLRHSEES 249 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + ++A +CGF DS++F +FRR+F +P + Sbjct: 250 VTDIAYQCGFGDSNHFSTLFRREFSWSPRDIRQ 282 >UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMJ8_9FIRM Length = 283 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 100/267 (37%), Gaps = 15/267 (5%) Query: 26 LLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL 85 L + + S + + + +G L+ +L +++ + + + Sbjct: 21 HLESIENLNGATSFGTLKSHHEIAEILFIEKGHCRMHLKEGSLQLHTDDLILVNSDTLHD 80 Query: 86 PVNNKPVMLLSLVFAPTWLGLSFYDSRTTS-------LLHPARQIQLPSLQRGEGEAMLT 138 + ++ L T S L R I L L + +L Sbjct: 81 FKTSSSFTAFTIHIGALHLCGLAPGHLTKSEAPLVLPLGKDGRHIFLRQLLKEV--KLLA 138 Query: 139 ALTHLSRSPLE--QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 AL E + Q LV+S+ L GN + + I ++ +Y + Sbjct: 139 ALKGEDDERCEIGAALAQALVISVTALAEE----DAGNEENPSFTMGTRIKEYIDAHYLE 194 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 L +A+ +I +LS F ++Y+ R+ +A+ +L +++I ++A +C Sbjct: 195 DLKLADIAEALHINLYYLSHTFKDLTGSSPMQYIIRRRIEEAQTLLLTTNMTITDIAMQC 254 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARF 283 G+ +S+YF VF G+ PG+Y + Sbjct: 255 GYNNSNYFQSVFSNIVGMPPGKYRKAW 281 >UniRef50_A8S8Z3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Z3_9FIRM Length = 420 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 15/207 (7%) Query: 85 LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLP--------SLQRGEGEAM 136 V M +++F T Y + LL A QI ++ R G Sbjct: 221 CYVTGADAMRCNVLFCLTDAQCQNYRTVLRPLLERASQILYNYFTVRLLWAVGRPTG--- 277 Query: 137 LTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 +L L+R E +QPL+ + V + G++ + + ++Q + ++ Sbjct: 278 --SLLGLARCCRENAHLQPLLT--VEQPIQFVEVNEGDATAGKMQVVAQVQEYIQSHLSE 333 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 LT VA FN +PN+LS+LF ++G F+EY+ R+A A+ +L++ L ++E+A++ Sbjct: 334 RLTLADVAAVFNFSPNYLSQLFGKYGDSGFVEYITETRIAAAKEMLEQGDLKVYEIAEKL 393 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARF 283 G+ + YF +VF++ GL+P EY Sbjct: 394 GYESAFYFSKVFKKVTGLSPREYQQSI 420 >UniRef50_A6DLX0 Transcriptional regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLX0_9BACT Length = 282 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 5/239 (2%) Query: 49 PRLDIVLRG--EYGNLLEAKQQRL--VEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWL 104 RL I L G L K + + F+P + NLP PV +++L+F Sbjct: 40 YRLAIPLDGCHRMKIPLNGKIETIYPKRYSATFMPKNSWNLPDWELPVKVVTLLFNDDGF 99 Query: 105 GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLC 164 ++ ++ H + EG +L L + L++ I + L + Sbjct: 100 ICNYVNT-QGGYDHSKLSQKSIYWSGLEGHTVLNLLKASPKHDLQKPYIHLVNALLFYCL 158 Query: 165 RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTM 224 S N S + + + +I ++++NY+ +RE VA F +TPN++S LF M Sbjct: 159 NSSSNQLENKSSSKAENTFKNIYLYLEENYSLVNSREDVATNFKLTPNYISHLFKSQTGM 218 Query: 225 RFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 F ++ +R+ +A +L+K++ +I E+A+ CG+ ++ YFCRVF++ G TP Y + Sbjct: 219 SFSHHLTTIRINQACYLLKKFNQNIDEIARVCGYHETSYFCRVFKKIKGHTPSAYRLKH 277 >UniRef50_C6DJR5 HTH-type transcriptional activator rhaR n=5 Tax=Pectobacterium RepID=RHAR_PECCP Length = 284 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 4/258 (1%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN 89 V A + DF L IV RG +L R+ G+M ++ A + + Sbjct: 23 VMVAERHPQPVFPLHHHDFDELVIVWRGNGLHLWNDVPYRITRGDMFYVSANDRHSYESV 82 Query: 90 KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLE 149 + L ++++ L LS R + + L + + + L + ++ Sbjct: 83 HGLELDNILYIRNRLTLSADWQRLLPGGEHPQSQRHWCLGSEGMDTLREKVDALRQECMK 142 Query: 150 QNIIQPLVLSLLHLCRSV----VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQ 205 + + + L L ++ P N Q + N ++ + A P E+ + Sbjct: 143 SDALSLQLSEALLLQIALLAARYRHTPDNPQLADAHQLDMLMNALRASIAAPFRFEAFCE 202 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 + + L F + M Y+R +R+ KA +L+ +I ++A CGF DS+YF Sbjct: 203 QHHFSARSLRSRFKEQTGMSVPHYLRQLRLCKAMELLRYDLQTIGDIAALCGFEDSNYFS 262 Query: 266 RVFRRQFGLTPGEYSARF 283 VF + FG++P Y RF Sbjct: 263 VVFHQAFGVSPSAYRQRF 280 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 13/261 (4%) Query: 34 SQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVM 93 + + + V G + L+ R+ G I + + Sbjct: 26 ENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSMHGGTPKDNCR 85 Query: 94 LLSLVFA-PTWLGLSFYDSRTTSLLHPARQIQLP-----SLQRGEGEAMLTALTHLSRSP 147 LVF L S + + + + S + +A++ A+ L + P Sbjct: 86 YDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSEPAKDAKAVIDAM--LEKEP 143 Query: 148 LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF----LYHSICNWVQDNYAQPLTRESV 203 + + +L +L + D + ++ ++++ NY + +T E + Sbjct: 144 GYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNYRKNITLEEL 203 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 A + N+ + F ++ +EY+ + R+ A ++ + ++A +CGF D Y Sbjct: 204 ANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKCGFNDYSY 263 Query: 264 FCRVFRRQFGLTPGEY-SARF 283 F +VF+ G+TP +Y F Sbjct: 264 FIKVFKSMKGVTPRDYCRRSF 284 >UniRef50_C4LFY1 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFY1_TOLAT Length = 285 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 9/247 (3%) Query: 44 LCIDF---PRLDIVLRGEYGNLLEAKQQR----LVEGEMLFIPARAANLPVNNKPVMLLS 96 DF PRL+ ++ G + ++ L G +L+ P + N+ +LLS Sbjct: 34 HETDFEACPRLEFMVEGSANIKSTRESEKVITQLNSGSVLYTPVDIQFDFLFNEKSLLLS 93 Query: 97 LVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPL 156 + F + L L+ + + G +L +L ++ L Sbjct: 94 MGFYKQQIILKLIAWDGEH-LNVLEKTSVLRRGPRVGAFILQSLQEAMWQKEDKQTATYL 152 Query: 157 VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSK 216 + SLL ++ P +QPR L+ I N+V DN+ + LTR+SVA+ F I+ +LS+ Sbjct: 153 IKSLLCSSLYLLQNPL-TTQPRRKSLFEEIRNYVDDNFYKDLTRDSVAKEFLISSTYLSR 211 Query: 217 LFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 LF + +RF EY+ ++R+ KA+ +L+++ + + +VA++CGF DS+YFCR+F+ + +P Sbjct: 212 LFQKEADLRFNEYLNYIRLEKAKSMLKRHDVKVKDVARKCGFNDSNYFCRLFKEKTDRSP 271 Query: 277 GEYSARF 283 EY A++ Sbjct: 272 SEYRAQY 278 >UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP2_9CLOT Length = 327 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 121/287 (42%), Gaps = 19/287 (6%) Query: 14 ADLF---SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 D+F + +N L + A QP + P+ F V G++ ++++++ L Sbjct: 38 DDIFAPHEEVAINVHHLPSWYGAPQPNTHPMKPHKHIFFEFVYVYSGQFHSVVDSESLVL 97 Query: 71 VEGEMLFIPARAANLPVNNKP-VMLLSLVFAPTWLGLSFYD--SRTTSLLHPARQI---- 123 + +++ + + P + ++L+++ + +F SR L Sbjct: 98 GQDQVILLNPNQVHAPYIERDSDLVLNILIKQPLIDRTFASLISRDNILFDFFYNYIYGI 157 Query: 124 -----QLPSLQRGEGEAMLTALTHLS---RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNS 175 L + + +++++ R EQ++I ++ L R Sbjct: 158 SGASNYLMVDRTPRVDQIISSIVEEYCERRPLFEQSLIGWIINLFTELARVYSERKTNQP 217 Query: 176 QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRM 235 I ++++NYA +T A+ F+ +P++LS L + F E VR R+ Sbjct: 218 ARPAKPGMAEIIGFIRENYA-TVTLSETAKTFSYSPSYLSYLIKKETGQTFKEIVRDFRI 276 Query: 236 AKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 A L+ L++ ++++ GF DS Y +VF++++G++P EY R Sbjct: 277 ESACNFLKNTQLTLEQISEILGFQDSFYIAKVFKQRYGISPSEYRKR 323 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 16/271 (5%) Query: 28 GRVWFASQPASLPVGS--LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN- 84 +F Q + + + D L V+ G + Q G++ IP + Sbjct: 16 HSFFFIDQRVTTSIEAKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGDVALIPPSMLHH 75 Query: 85 ---LPVNNKP---VMLLSLVFAPTWLG-----LSFYDSRTTSLLHPARQIQLPSLQRGEG 133 P + V L + F+ + + +R T + P ++ + Sbjct: 76 WEYSPDSADDDGYVRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNALKFGTGSSQTI 135 Query: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 +L+ + + + + L+ ++ P N + R IC +V + Sbjct: 136 RRILSQMNDMDELGRLCEMFR-LLPAIFTSSDHTFAGKPMNIE-RDVRRMQQICVYVMTH 193 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 Y ++ + +A + + F + M F +YV R+ A +L+ + E+ Sbjct: 194 YIHTISLDDIAAEVGMNRSAFCSYFKRCKGMTFSQYVTQYRLNTACELLKHSQKQVSEIC 253 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 GF D +F RVF+ G++P +Y RFQ Sbjct: 254 FTVGFNDLPHFVRVFKNTLGMSPSKYRRRFQ 284 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 94/253 (37%), Gaps = 3/253 (1%) Query: 33 ASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPV 92 A+ F L V +G +E KQ + + +++ I + NK Sbjct: 26 ATSDKDWHSMEHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQ 85 Query: 93 MLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI 152 + + + + + ++ + ++ Q I Sbjct: 86 PWEYIALGIEGVQFQYSEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQ--TQQEGYQTI 143 Query: 153 IQPLV-LSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITP 211 Q L+ L LL + RS + + + ++ ++Y + +T ++++ +I Sbjct: 144 CQNLLELILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINK 203 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 +L F + + I Y+ R+ +AR +L+ + S+ ++ + GF YF + FRR Sbjct: 204 YYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRL 263 Query: 272 FGLTPGEYSARFQ 284 G TP Y + + Sbjct: 264 TGTTPNAYRKKKK 276 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 104/258 (40%), Gaps = 21/258 (8%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV---NNKPVMLLSL 97 DF +++ G+ ++ K + EG+ + + + + + + + Sbjct: 30 QNYHAHDFIEFAVIMGGKGKFYIDGKDYEVEEGDFILLNPGTYHRSKAGYSKEGLKECYI 89 Query: 98 VFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQN-----I 152 F+ G+SF ++ ++ + + + T +++ E + + Sbjct: 90 AFS----GVSFKGCKSGYFPSFKGNGKIIKMADRMKKNIFQICTVMNKEARECSAGRYFM 145 Query: 153 IQPLVLSLLHLCRSVVNMPPGN--------SQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 ++ ++ +L L ++ I ++++NY + ++ E +A Sbjct: 146 LKAYLIQILCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQQIMKYMEENYREKISLEQIA 205 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ-KYHLSIHEVAQRCGFPDSDY 263 ++ +++K+F I Y+ +RM KA+ IL+ I EVA G+ D+ + Sbjct: 206 ANMYLSSFYIAKIFKSETGDTPINYLIRLRMEKAKEILEISPEEPIKEVAAAVGYSDAYH 265 Query: 264 FCRVFRRQFGLTPGEYSA 281 F ++F++ +G++P Y Sbjct: 266 FSKLFKKHYGISPLYYKK 283 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 116/265 (43%), Gaps = 16/265 (6%) Query: 27 LGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP 86 L ++W + ++ + G+ K +++G+++ I +R + Sbjct: 23 LSKIWELGTN----FKEHWHEHLQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYL 78 Query: 87 VN-NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQ--IQLPSLQRGEGE---AMLTAL 140 + N + + +L D T L P + I +L R + E + T + Sbjct: 79 ESLNNDLRFYLIRIDLPFLFSDQVDLCQTKYLSPLSENLILFKNLIRNDDEIVRCIKTII 138 Query: 141 THLSRSPL------EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNY 194 ++ + + N+ +VL + + V + D ++ + +V N+ Sbjct: 139 KEYNKKEIGYELAVKANLYNLVVLLIRNYIDKFVTKRQLAFKINNDERFYKVFEFVHSNF 198 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 + ++ +++ +++P + ++F Q EY+ VR+ K+ +L+ +++I EVA Sbjct: 199 NKKISTLNLSNIAHVSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAI 258 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEY 279 CGF D +YF R+F++++G++P ++ Sbjct: 259 NCGFNDVNYFSRLFKKKYGVSPTKF 283 >UniRef50_C6D490 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D490_PAESJ Length = 527 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 88/170 (51%), Gaps = 7/170 (4%) Query: 116 LLHPARQIQLPSLQRGE--GEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPG 173 LL R++ LQ+ + G +L +L +SR ++ L + + R ++ Sbjct: 360 LLSSVRKMSFRQLQQNDFLGRHIL-SLEGMSR----FQTLESLEEWMAQVIRKIIVFKQE 414 Query: 174 NSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 ++ P+ + + +V ++Y++P+T ++ F I+P +LS+ F Q ++ ++ + Sbjct: 415 HNIPKKKDIIAEVKEYVAEHYSEPITLADLSARFFISPYYLSQFFKQKTGDTYVNFLTRI 474 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 R+ KA+ +L++ L ++EV Q G+ D+ +F R+F + G P +Y R Sbjct: 475 RINKAKELLERTDLKVYEVCQMVGYSDTQHFARMFEKLTGYKPRDYRKRL 524 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 115/264 (43%), Gaps = 8/264 (3%) Query: 21 VLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQ-QRLVEGEMLFIP 79 NP+++ ++ + DF + ++L GE E + +++ G ++ Sbjct: 8 TFNPEIIY-LFDPWTQSESHGEMHHHDFLEISVLLEGESTYYFEKEPAKKIRAGSVMLFN 66 Query: 80 ARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA 139 + + K L + L + HP ++ Q E L Sbjct: 67 PGVDHCELQPKGTRSHQLHIGLKNISLEGFKRNFFPNKHPLLELGKYHHQVLEKAWQLVR 126 Query: 140 LTHLSRSPL----EQNIIQPLVLSLLHLCRSVVNMPP--GNSQPRGDFLYHSICNWVQDN 193 + R + +++ LV L L +N+ P SQ R + + +++++ Sbjct: 127 ESSEERDEFQLMQKAVLMEMLVYILRGLNEDHINVLPYLSKSQRRQQQIVNYTVYYLENH 186 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 Y + +T E +AQ ++P +LSK+F + + I Y+ +R+ +A+ +L+ +L+I EVA Sbjct: 187 YKEEITLEKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNENLTIKEVA 246 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPG 277 G+ D+ +F + F++ +G++P Sbjct: 247 SAVGYQDAYHFSKSFKKLYGVSPS 270 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 107/262 (40%), Gaps = 11/262 (4%) Query: 28 GRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV 87 +++ LP D + + +G ++ K+ L + LF+ + + Sbjct: 24 EKIFVHENNTLLP---HWHDEFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGK 80 Query: 88 NNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL---- 143 ++VF+ + L D + L + +L E E ++++ Sbjct: 81 AEDNPEPYAIVFSLSMLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELISNIITVW 140 Query: 144 -SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSIC---NWVQDNYAQPLT 199 + + +++ + + + + + ++ D I +++ NY+ + Sbjct: 141 KEKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDID 200 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 + +A+ N++ + +LF + + ++Y+ R+ KA +++ +LSI E+A GF Sbjct: 201 IDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFN 260 Query: 260 DSDYFCRVFRRQFGLTPGEYSA 281 + YF +VF+ G+TP +Y Sbjct: 261 NVSYFIKVFKEYVGVTPFKYKK 282 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 98/248 (39%), Gaps = 9/248 (3%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNK--PVMLLSLVFAP 101 + L +L GE + +G M+ I + + + + + F+ Sbjct: 30 HVHEGYELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLHRTSSTEVQEFERILINFSH 89 Query: 102 TWLG--LSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH---LSRSPLEQNIIQPL 156 ++ L R I ++ E ML + L + E + L Sbjct: 90 DFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEMKKECKLKKEGHEDVVRALL 149 Query: 157 VLSLLHLCRSVVNMPPGNSQPRG--DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHL 214 L + RS+ ++P D I +++ ++ + +T + +A F I+P++L Sbjct: 150 FQLLFTIYRSLAGGGRNQTRPLHPMDEKISEIASYINCSFQETMTLDGLAGQFYISPSYL 209 Query: 215 SKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGL 274 S++F + EY+R +R+ +A+ L+ I ++A GF +F +VF+ G+ Sbjct: 210 SRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAADTGFKHISHFNKVFKEIVGI 269 Query: 275 TPGEYSAR 282 P +Y + Sbjct: 270 PPLQYRKK 277 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 14/254 (5%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP-------VMLLS 96 D L V+ G+ + Q G+++ IP + N V L Sbjct: 34 HQHDAWELYYVVHGQGNRMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEEGHVRYLM 93 Query: 97 LVFAPTWLG-----LSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQN 151 + F+ + L +R + + P ++ +L+ + + Sbjct: 94 VAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRILSEINEMDELERLSA 153 Query: 152 IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITP 211 + + L + ++ P R IC +V +Y + + +A+ + Sbjct: 154 MFRLLPVIFTSSDYTLAGKPM--RIERDVRRMQQICAYVMKHYVHSIALDDIAEEVGMNR 211 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 + F + M F ++V R+ A +L+ + E+ GF D +F RVF Sbjct: 212 SAFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFVRVFTNT 271 Query: 272 FGLTPGEYSARFQG 285 G++P +Y +++ Sbjct: 272 MGMSPTKYRKQYKN 285 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 69/132 (52%) Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 ++ L + + +V+ + + +++ ++Y PLT E VA++ I+P Sbjct: 381 LEELKRTATEQLQHMVHYIQAWRHQQANGKIGKAKDYIDEHYHHPLTLEEVAEYVGISPY 440 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 + SKLF M FI+YV VR+A+A+ + + S+ E+ G+ D +YF RVF++ Sbjct: 441 YFSKLFKDRFGMTFIDYVTEVRIARAKKEMADPNKSLKEICFLVGYNDPNYFSRVFKKHT 500 Query: 273 GLTPGEYSARFQ 284 G++P EY + Sbjct: 501 GMSPTEYRKKLH 512 >UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CWX4_9VIBR Length = 316 Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 107/252 (42%), Gaps = 15/252 (5%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI-PARAANLPVNNKPVMLLSLVFAP 101 + +L+G + ++ + G M+F+ P + +L LL++ F+P Sbjct: 44 AHWHAAAEFICILKGSFAIGVDGNSKTYHSGGMVFLAPNKIHSLQSKTANSRLLTVQFSP 103 Query: 102 TWL----GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLT----ALTHLSRSPLEQNII 153 G ++ S H + + R +AML +T L + Sbjct: 104 LLFQQLTGDVSFNYGVKSFEHQSEK------DRSVWDAMLDLASEYVTDLDTISFSHMSL 157 Query: 154 QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 +L+ + V+N+ + + D L + ++ +Y +PLT +A+ ++ ++ Sbjct: 158 IYRLLANIERVSEVINLTQNSVRDNDDELIKTCLTYIDSHYMEPLTLTDIAERSGLSYHY 217 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 +S++F + F +Y+ ++R++KA +L I ++A +CGF + FR+ + Sbjct: 218 VSRMFKRVCGFNFKDYLTFIRVSKALPLLCDTTFPITDIAHKCGFSEHKLLIAAFRKYYD 277 Query: 274 LTPGEYSARFQG 285 TP + ++ G Sbjct: 278 QTPTAFRKKYNG 289 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 120/272 (44%), Gaps = 14/272 (5%) Query: 27 LGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNL-LEAKQQRLVEGEMLFIPARAANL 85 + ++ S A L V + + VL G+ ++ ++ +G+++ I + A + Sbjct: 16 IKIIFHTSDDAQL-VPRHWHESIEISYVLSGKIDDIYIDGIHYTSEQGDIVLINSNAIHS 74 Query: 86 P--VNNKPVMLLSLVFAPTWLGLSFYDSRTTSLL------HPARQIQLPSLQRGEGEAML 137 V K ++ + +L ++ D + + +I++ + R ++++ Sbjct: 75 FSVVQGKNRKAVTFFISYEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIFNELRENLDSII 134 Query: 138 TALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGN----SQPRGDFLYHSICNWVQDN 193 A ++L L + L L++L + + + I N++++N Sbjct: 135 RAFSNLRDDSLAHIKVIGLSYELIYLLLKNFKISKKSFGEIKTKKYLDRLTEITNYIKEN 194 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 Y+Q L+ + ++ FN++P +LS+ F ++ M Y+ VR+ K+ L SI E+A Sbjct: 195 YSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNTDQSITEIA 254 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 GFP+ F +VF+ + +TP +Y + + Sbjct: 255 LEHGFPNEKSFNKVFKTFYNITPNQYRKKIKA 286 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 105/258 (40%), Gaps = 10/258 (3%) Query: 34 SQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVM 93 + + + ++ GE ++ K + G+++ I + + Sbjct: 25 HRTKPFERNNHYHGTYEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHKTSGHGDPE 84 Query: 94 LLSLV--FAPTWLGLS--FYDSRTTSLLHPAR-QIQLPSLQRGEGEAMLTALTHL--SRS 146 +V F+ ++LG S + + R ++L ++ +L + RS Sbjct: 85 HERIVINFSDSFLGKGHPLLASGLLGMFNQDRPLLRLTVPEQAIIMQILNKMADEIRERS 144 Query: 147 PLEQNIIQPLVLSLL---HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESV 203 ++++Q L+ LL + ++P S + ++ +YA +T + + Sbjct: 145 ASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDVVKFIHVHYADKITLQGL 204 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 ++ F I+P +LS++F + I Y+ R+ +A+ +L L I ++A+ GF + Sbjct: 205 SETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDIAESIGFESLTH 264 Query: 264 FCRVFRRQFGLTPGEYSA 281 F R F++ +T +Y Sbjct: 265 FDRTFKKIMNMTASQYRK 282 >UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EI06_PEDAC Length = 280 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 17/283 (6%) Query: 9 DQQFFADLFSGLVLNPQLLG-RVWFASQPASLPV---GSLCIDFPRLDIVLRGEYGNLLE 64 + QF D+ + +P ++ P + ID+ L V+ G+ Sbjct: 2 NNQFTEDVSILVDNDPLSAEFHIYEVGYEKCQPTKPFEYIPIDYWVLHYVMDGKGYFSAG 61 Query: 65 AKQ-QRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLS-FYDSRTTSLLHPARQ 122 Q L G+ +PA N+ +K + + W+G+S ++ + + +R+ Sbjct: 62 NSDLQHLSAGDTFLLPANCPNIYYPDK-----ADPWTYVWVGISGELTAKYLAQIGLSRR 116 Query: 123 IQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPL--VLSLLHLCRSVVNMPPGNSQPRGD 180 + + + + ML H+ ++ ++ Q L V SLL + N +G Sbjct: 117 NFVINASIDKTKEML--FNHVYQAFKDKQNFQSLSAVYSLLDYLQQ--ENHANNPVNQGK 172 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 ++ I +V +N+A LT +A N+ ++L KLF ++ + +YV +++ KA Sbjct: 173 QIFDKILLYVDENFASGLTISQIAANNNVDRSYLYKLFQRYLGKKPSQYVHQLKLQKACS 232 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +L+K L+I +++Q CGF S YF VF ++ TP +Y RF Sbjct: 233 LLRKSSLNITQISQECGFSSSAYFTNVFAKEMNSTPLKYRNRF 275 >UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFA6_VIBFU Length = 268 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 96/244 (39%), Gaps = 5/244 (2%) Query: 40 PVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVF 99 DF L IV +G ++L L + + +I + +L + + L +++F Sbjct: 27 DFPEHSHDFHELMIVTKGAGQHILNDVPINLAQNYICYISPKDRHLFEQSDNLHLTNILF 86 Query: 100 APTWLGLS-FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLS--RSPLEQNIIQPL 156 L S S + + + + ++ + H S S + + + L Sbjct: 87 QKNKLAYSPLLKSVLPKESDAQQSWYISTETMKKVCTLMAQIEHESSLHSVESRLMTEAL 146 Query: 157 VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSK 216 L+ S D I +W+Q+NYA+ ++ F I+ LS+ Sbjct: 147 FQQLV--VEISRGRLTSQSNNASDNSILKIIDWIQNNYAEEFNVGDISDQFEISSRTLSR 204 Query: 217 LFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 Q + F YV VR+ A +L LS+ ++A + G+ DS+YF F+R TP Sbjct: 205 RIKQVTNLSFNNYVHRVRINHAMNLLHYSDLSVTDIAFQVGYKDSNYFSTKFKRFTNKTP 264 Query: 277 GEYS 280 E+ Sbjct: 265 TEFR 268 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 98/265 (36%), Gaps = 11/265 (4%) Query: 29 RVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN 88 + ++ + + + VL G + +L +G+++F+ A + + Sbjct: 18 KFYYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEGSYQLKKGQIIFLDAGTRHRLIV 77 Query: 89 NKPVMLLSLVFAPTWLGLSFY-------DSRTTSLLHPARQIQLPSLQRGEGEAMLTALT 141 ++ + ++ F+ +F ++R + + QL + L L Sbjct: 78 SERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLHDTDDTYQCLRRLI 137 Query: 142 HLSRSPLEQN--IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 EQ ++Q L+ L + +P ++ NY + ++ Sbjct: 138 LEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVA--EPDQQAYVKRALAYIHQNYDREVS 195 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 +A ++ P +L ++F E++ R+ KA+ +L++ +SI ++ G Sbjct: 196 VADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDIPHYIGMN 255 Query: 260 DSDYFCRVFRRQFGLTPGEYSARFQ 284 YF F++ TP EY R Q Sbjct: 256 SQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN89_9FIRM Length = 286 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 117/281 (41%), Gaps = 6/281 (2%) Query: 6 LPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEA 65 +P S L P+L G + ++ CI L+ ++ G +++ Sbjct: 1 MPVSIDIDQQEASPFELEPRLTGFYHWNRSIRTMHQHENCI---ELNFMISGNGTHIVGN 57 Query: 66 KQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL 125 + G+++ ++ + + + GL +R +LL P + Sbjct: 58 EICHTQPGDIIIYDSKVMHDESLMLDSLTDACCI--AVTGLKRPGARPNALLPPGLHPCI 115 Query: 126 PSLQRGEGEAMLTALTHLSRS-PLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYH 184 P + L + S + P +++HL ++ + + + L Sbjct: 116 PCQSIAQELCTLYHIIERSLAKPHGYPAANAAAQTIVHLVWQQISERAVRAAGQENMLME 175 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 + ++++ +YA+ L+ +AQ F+ + ++++ F ++Y+R R+ KA+ +L Sbjct: 176 RVRSYIEQHYAEALSIRDIAQEFHASRDYIAHAFKHTTNYAPLQYLRRWRIGKAQTLLID 235 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 LS+ EVA R GF D +YF RVFR+ G+ PG + ++ Sbjct: 236 TDLSLTEVASRVGFDDPNYFSRVFRQVIGMPPGTFRRTWRA 276 >UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7G2_ACAM1 Length = 311 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 102/262 (38%), Gaps = 11/262 (4%) Query: 32 FASQPASLPVGSLCID---FPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN 88 + PV LD V EY + Q GE++ IPA Sbjct: 52 HHQPAHTTPVHKFTHHVLILSPLDNVFEVEYQLGELSFQGPYGHGELMIIPAHTPQQCQW 111 Query: 89 NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL-PSLQRGEGEAMLTALTHLSRSP 147 ++ V LSL P + + YD + I + L G A+ L L Sbjct: 112 HQAVSFLSLSLEPQFFETAAYDLTQVNRFELLPNIAVQDRLIYDIGTALRQELNTL--EF 169 Query: 148 LEQNIIQPLVLSL-LHLCRSVVNMPPGNSQPRGD----FLYHSICNWVQDNYAQPLTRES 202 + I LV +L +HL + P L + ++ D+ Q L Sbjct: 170 TDHLYIDSLVTALSIHLMKRYCTQVPRLKDSSDQGLPPALLNRALEYINDHLDQNLKLVD 229 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 +AQ ++ + S+LF + + +Y R+ KA+ +L++ + I +A++CGF + Sbjct: 230 LAQEVGMSRYYFSRLFKKSMGVAPHQYAIKQRIKKAKGLLRQTNTPIAMIARQCGFTNPS 289 Query: 263 YFCRVFRRQFGLTPGEYSARFQ 284 + + FR+ G+TP + +++ Sbjct: 290 HLSKYFRQLTGVTPKAFRDQYR 311 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 110/271 (40%), Gaps = 14/271 (5%) Query: 20 LVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIP 79 L+ N L V + F L V +G G + A + + E + + I Sbjct: 14 LINNQARLLYVSSSKYEGDWHSQLHSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIIN 73 Query: 80 ARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA 139 + V+ L +V A + + + + + E L Sbjct: 74 PNTMHTEVSRDRNPLEYIVIAIDGISFEIPEDSLKDYISCNY-----ANYKNEILFYLNL 128 Query: 140 LTHLSRSPLE------QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 + S++ E Q ++Q L++++L L R V++ G + + F+ I N++ N Sbjct: 129 MVKESQAKNELYDDMCQQLMQVLLINILRLNRINVSLTQGKTIRKEIFM---IKNYIDRN 185 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 Y + +T +++A+ ++ +L+ F + I Y+ R+ +++ +L+ LSI +++ Sbjct: 186 YHKEITLDTLAEKTHMNKFYLAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQIS 245 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 GF YF + F++ +P +Y Q Sbjct: 246 TILGFSSLSYFAQAFKKSTNFSPLQYRKNHQ 276 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 105/295 (35%), Gaps = 16/295 (5%) Query: 2 KAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLP-VGSLCIDFPR------LDIV 54 K G P ++ + L + + R+ + P + L Sbjct: 4 KKDGFPNEKAIVIPQENLLRIKENPMTRLLHPTDVGYYPCAEGHYRERTEGSPQHILIYC 63 Query: 55 LRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VNNKPVMLLSLVFAPTWLGLSFYDSR 112 GE + + + + + I A ++ + P + + F L Sbjct: 64 HEGEGWYNIGKGKCTVKKNDFFIIEAGTPHVYAASTSHPWSIYWIHFTGEQSHLFSELFN 123 Query: 113 TTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPP 172 T + + + + E ++ ++ + L L +L S +P Sbjct: 124 RTIYIDDSPTARFNDRIQLFNEILVN-----LEMGYSIENLEYITLCLWYLLGSFRYIPQ 178 Query: 173 --GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYV 230 ++P+ + N+++ N + LT E +A+ N +P +LS LF Q M I Y Sbjct: 179 FREINKPKTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSGMSPINYF 238 Query: 231 RWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 +++ KA +L E+A F D YF +VF + ++P EY + +G Sbjct: 239 NQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSPKEYRMKKKG 293 >UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCV1_BACSK Length = 293 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 91/257 (35%), Gaps = 12/257 (4%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVM 93 P L IV G ++ + + +G + F + P + P Sbjct: 27 PTDYNGYYHWHQGCELLIVFDGAGSVVVNQQMSPIKKGMLFFFQPFQLHHVAPASAAPYE 86 Query: 94 LLSLVFAPTW----------LGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL 143 +L F P + F + P M + Sbjct: 87 RATLHFDPLHAEKRLTAYPAMAQFFRQLKNGYNQDPFIDFSEDYFYIRSLCDMHDKMAEA 146 Query: 144 SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESV 203 + + L++ LL + + P + R I W++D+ +P + Sbjct: 147 ASINERAEREELLLIQLLSYMQHQLKGRPPTKKLRHIHYAERIMGWIEDHLTEPFNLSLL 206 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 AQ ++ +++SK+F + +Y+ RM +A +LQ L I E++QR G + Y Sbjct: 207 AQDLYLSKSYVSKVFRRETGSSITDYLTARRMKEACHLLQTTSLPIDEISQRIGLTNVSY 266 Query: 264 FCRVFRRQFGLTPGEYS 280 F ++F+R+ TP +Y Sbjct: 267 FIQMFKRKTNATPHQYR 283 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 107/278 (38%), Gaps = 17/278 (6%) Query: 19 GLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI 78 G NP + + +PV D + V +G+ + + + + Sbjct: 12 GTPENPFSQYHISDVKRAFQIPVHW--HDELEIIYVKQGKLHVTISGENYIGSPKDAFVV 69 Query: 79 PARAANLP-VNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL---PSLQRGEG- 133 + +L + +F ++ D S+L P ++ +L P + Sbjct: 70 SPGSLHLMGSPTGDADYYTFLFPLEYISFQTDDLMEKSILSPLKRGRLMISPQINDTAAD 129 Query: 134 --EAMLTALTHLSRSPLEQNIIQPLVLS------LLHLCRSVVN--MPPGNSQPRGDFLY 183 E ++ +S E+ + L+ R + + N + Sbjct: 130 ICERLIEINEQISGKNAEKTDAANIEAQFETKITLIKFIRKMWRNGLILENGTNGTNTTE 189 Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 + +++ NY + ++ + F+++ ++S+ F +H + +YV +R+ AR +L+ Sbjct: 190 KEMITYIRQNYTREISLKEFGAQFHLSEKYISRYFKEHFHITLSQYVNHLRLEHARQLLE 249 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + S+ EVA G+ + YF R F++ +G++P +Y Sbjct: 250 ESTASVTEVAMCSGYQNVSYFIRSFKKMYGVSPLKYRN 287 >UniRef50_C0EHT5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHT5_9CLOT Length = 318 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 104/273 (38%), Gaps = 22/273 (8%) Query: 29 RVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN 88 ++ + DF + V G N+++ K+ L +G++ I A + + Sbjct: 44 QIGVLPHNSHGNTPLHQHDFFEMVYVHEGYCDNMIDNKKVSLTKGDICLINTYAVHTLLC 103 Query: 89 NKP--VMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAML--------- 137 + P ++ +++ + + + + + QR + ++ Sbjct: 104 DDPDNAVIFNIMIGAEMMNAAHFRLLSYNDFVADFFFHSLEKQRDDDNYLIFHQSEKENA 163 Query: 138 ----------TALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSIC 187 H E I+ L+ L RS M + + Sbjct: 164 ANNLCVQLINEYYGHEEDLYQESKILHLFDCILIELTRSYQKMKDHPLGKKDSLKVSDMI 223 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++++Y +T +S+A +F P H S++ Q F + + +RM A+ +LQ L Sbjct: 224 YYIENHYNS-VTLKSIADYFGYHPKHFSRIIHQATGQTFTDLLLDLRMRCAKELLQNNSL 282 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 SI E+ + G+ + +F F+++F ++P +Y Sbjct: 283 SITEIMHQVGYHNYKWFSNQFQKKFDMSPKKYR 315 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 111/282 (39%), Gaps = 16/282 (5%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 + + +++ ++ P+ + + L G Y + L E ++ Sbjct: 8 IHETVKYKEYSNVKLFINAEAEDYPIHWHTPM--EIIMPLEGGYTVQIGDDLVHLNENDI 65 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 +FI + + + P L+ W +S + L A I L G+ + Sbjct: 66 IFIASGVKHRLI--APDTGKRLILQIEWSAVSKIKELNSILTLIAPAITLTPETSGDIHS 123 Query: 136 MLTAL-----------THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF-LY 183 + L + LS + + I++ LVL H S + G + + + Sbjct: 124 NIRKLLLDISNEYQTDSFLSEAVIYSKILEVLVLIGRHHTASSCHFNVGRHKQQEYLERF 183 Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 SIC ++ + + +T + +A+ + H ++LF Q F +Y+ R+ A +L Sbjct: 184 LSICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKRIELALTLLA 243 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 ++S+ E A + GF + F RVF+ + G TP E+ F G Sbjct: 244 DPNISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFRKMFIG 285 >UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6W3_9BACT Length = 256 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 23/242 (9%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPT- 102 + L ++ GE N + + +++ GE+L IP + ++ V +VF Sbjct: 21 HRHNGTELVYIVEGECENRIPFRDRKIAAGELLIIPPELEHRQIDLGFVRTFYVVFEAKP 80 Query: 103 ---WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLS 159 L D R+ + + + +L L + L + + Sbjct: 81 GVFRNDLRSIDVRSDRFVRSWMEQLV----------LLYQEQALDQCRLLLPALLARITR 130 Query: 160 LLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFA 219 L +P G + ++ ++ + L +A ++P++ + LF Sbjct: 131 LEGSIDGTAEIPAG---------LAAAIRFITYHFHRELAIREIAASNGMSPSYFNALFH 181 Query: 220 QHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 +H + EY++ +RM AR +L+ L+I E+ ++CG+ ++ YFCR+FR+ G TPGEY Sbjct: 182 KHMQVSPAEYIKKLRMGHARQLLRNSRLTISEIGEQCGYRNAYYFCRIFRKVHGCTPGEY 241 Query: 280 SA 281 A Sbjct: 242 RA 243 >UniRef50_UPI0001C35C03 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C03 Length = 301 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 38/265 (14%) Query: 19 GLVLNPQLLG-RVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEG-EML 76 G +L+ + +G R+ S + V P ++ + RGE + E + EG + L Sbjct: 67 GTLLSEETIGKRIGKNSDAVTYHVL------PVVEGLKRGELRSAYELLAAEIDEGVKTL 120 Query: 77 FIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 F P PV+L V + + ++ + +Q+ SLQ+ E + Sbjct: 121 FSP-----------PVLLKQRVIFALFQIMRNFEVLISGNFKKEANLQISSLQKAETLTL 169 Query: 137 LTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 L + L L L + + GN G + +++++Y Sbjct: 170 LK---------------RSLYAFFLDLGKELNCQKEGN----GRDIMTDCGEYLENHYMD 210 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 + ESVA+ ++ P++ S LF F EY+ +RM KAR +L + ++A Sbjct: 211 EINLESVAEKYHFNPSYFSTLFKNTYKSTFSEYLIRIRMEKARELLLTTESRVRDIAVLT 270 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSA 281 G+ D++YF R F+R + +TP EY Sbjct: 271 GYRDANYFVRAFKRYYEMTPEEYRK 295 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 123/311 (39%), Gaps = 37/311 (11%) Query: 3 APGLPADQ-QFFADLFSGLVLNPQLLG---RVWFASQPASLPVGSLCIDFPRLDIVLRGE 58 AP P D + F P + + F ++ DF L V+RG Sbjct: 63 APPPPKDGVMVLDNRFLSRNFRPSDILINAHIPFFNRSPQP----HKHDFFELVYVVRGS 118 Query: 59 YGNLLEAKQQRLVEGEMLFIPARAANLPVNNK---------------PVMLLSLVFAPTW 103 N+++ ++ L +G+ + A + + LS+V Sbjct: 119 MKNVVDGRRILLEQGDFCLMNPNAVHQVETDGKDPLAINFLMKKELFNKAFLSIVLENEL 178 Query: 104 LGLSFYDS------RTTSLLHPARQIQLPSLQRGEGEAMLTAL-THLSRSPLEQNIIQPL 156 F DS + L+ AR ++ P + + +L + + Q +I+ Sbjct: 179 FANFFVDSIYHKKNKQNYLVFSARHLEEPII----SQYLLQIFREYENDQLYSQRVIESA 234 Query: 157 VLSL-LHLCRSVVNMPPGNS-QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHL 214 + L + RS S Q I +++ +NY T ++ A+ FN P +L Sbjct: 235 MSCLFVEFTRSYKRELEFESLQDLPGGNISKIISYLSENYRTA-TLQTTAKQFNYHPKYL 293 Query: 215 SKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGL 274 L ++ F E V+ R+A A +L++ L I +VAQ G+ + YF +VF+++FG+ Sbjct: 294 PNLLKKYLGQSFSEIVQQFRLAHACELLKQTELPISDVAQESGYTNRTYFYKVFQQKFGM 353 Query: 275 TPGEYSARFQG 285 +P +Y + Q Sbjct: 354 SPNDYRHQNQA 364 >UniRef50_Q2RGN4 Two component transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN4_MOOTA Length = 548 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 70/138 (50%) Query: 144 SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESV 203 S L + + + +L ++V + R L +++ N++Q LT E V Sbjct: 400 STEFLTLDNLADMRERILERLMALVAQVAETREQRNSSLIDRASKYIEANFSQDLTLEEV 459 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 A+ ++P + SKLF Q + FI+Y+ VR+ AR +L L + E+A R G+ D+ Y Sbjct: 460 ARQVYLSPCYFSKLFKQFKGLNFIDYLTKVRLKAARELLLNTKLPVAEIATRVGYRDARY 519 Query: 264 FCRVFRRQFGLTPGEYSA 281 F +VF++Q G TP + Sbjct: 520 FGQVFKKQEGYTPSVFRK 537 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 13/250 (5%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VNNKPVMLLSLVFAP 101 ++ + +V +G ++ L G+++ +P + + K V +L F P Sbjct: 33 HLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSIHCSLLDKGKTVTTSALYFCP 92 Query: 102 TWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA-LTHLSRSPLEQNIIQPL---- 156 + L S S + SL + R E A L L ++ I L Sbjct: 93 SLLA-SMIGSESDSLHSLFTTAKTTKQYRYYMEREKQAFLAGLFDEIAKETAIADLYSGE 151 Query: 157 -VLSLLHLCRSVVNMPPGNSQPRGDFL----YHSICNWVQDNYAQPLTRESVAQFFNITP 211 V L+ V+ G +Q + L ++ + + L + +A + P Sbjct: 152 TVALLIRYAIVFVSRNCGTAQEKLSPLVPAWIKESLAYIDAHLHEELDLKMLAAHACVHP 211 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 ++ SK F + +IE+++ R+ KA+ +L+ LSI +A+ CG+ +F R FR Sbjct: 212 SYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDLSIQAIAEACGYHSMPHFYRTFRAA 271 Query: 272 FGLTPGEYSA 281 G TP Y Sbjct: 272 TGTTPAAYRK 281 >UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGS5_CLOCL Length = 293 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 117/291 (40%), Gaps = 22/291 (7%) Query: 11 QFFADLFSGLVLNPQL--LGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLL---EA 65 L++ +LN + ++ Q + + D + V+ G+ + Sbjct: 1 MITNSLYNPKLLNKDYRPIINTYYFRQWINYKMDYHTHDRVEIMYVIDGQCEIDVATDNV 60 Query: 66 KQQRLVEGEMLFIPARAANL--PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPAR-- 121 +L +G+ + + A + + K +L++ F+ ++ S + L+ + Sbjct: 61 NNLKLKKGDFILLDAGTVHRLIVLGEKSCRMLNIEFS--FIEDSDILTSIRLLIEKVKSI 118 Query: 122 ----QIQLPSLQRGEGEAMLTALTHL-----SRSPLEQNIIQPLVLSLLHLCRSVVNMPP 172 +++ P L + + +L ++ S Q IQ L LL V Sbjct: 119 ALLFEMRCPFLLLKDNNDIYHSLKNIVIQLGMESEENQFSIQLLFYELLLKISKVAMSNE 178 Query: 173 GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRW 232 S + + +++ NY + +T + ++ + NI ++L+++F +H EYV Sbjct: 179 NTST--SNIYINKAKHFISMNYDKDITIKDISSYVNINEDYLNRIFKKHTGHTITEYVTL 236 Query: 233 VRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 R+ KA+M+L + I ++ G YF +VF++ G++P +Y Sbjct: 237 FRIEKAKMLLSNTDIPIIDICSYVGINSRQYFSQVFKKCTGISPYKYRKSI 287 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 113/253 (44%), Gaps = 20/253 (7%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPT 102 + DF + I+ G+ +E ++ L +G+ML + + + L Sbjct: 29 NHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVKHYDITEPGMTNAQLHIGFR 88 Query: 103 WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL-----SRSPLEQNIIQPLV 157 L Y T P ++ L ++ E A+L+ + + P I++ V Sbjct: 89 NFTLEGYSRNTF----PFKKAFL--RKKEEDSAILSISKQIIEEKDAEKPGYDLILKAFV 142 Query: 158 LSLL-HLCRSVVNMPPGNS-------QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 + L+ H+ R N+ + + L + I ++++ ++ + ++ +++Q I Sbjct: 143 MQLIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEKHHTEDVSLSTLSQTMYI 202 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 +P ++SK+F + I Y+ +R+++A +L+ ++++ + A G+ D+ YF ++F+ Sbjct: 203 SPAYISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQAANMVGYNDAYYFSKLFK 262 Query: 270 RQFGLTPGE-YSA 281 + +G P E + Sbjct: 263 KYYGFPPSENWRK 275 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 100/245 (40%), Gaps = 6/245 (2%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTW 103 L+ + G L+ + +G+++FI + + + +++ ++F P+ Sbjct: 57 HWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVMDVIMFEPSL 116 Query: 104 LGLSF-YDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL--THLSRSPLEQNIIQPLVLSL 160 L + +D + + S E +L + + +R ++I+ ++ Sbjct: 117 LSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSDLIRF 176 Query: 161 LHLCRSVVNMPPGNSQP---RGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKL 217 L L ++ P +P RG + ++ + T + ++ +++P+ S L Sbjct: 177 LSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYGWTLQELSDLTHLSPSRFSAL 236 Query: 218 FAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPG 277 F Q Y+ +R+ A +L+ I E+A+ CGF + F R+F++ G +P Sbjct: 237 FQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQHVGASPS 296 Query: 278 EYSAR 282 E R Sbjct: 297 EIRER 301 >UniRef50_C6CRC2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRC2_PAESJ Length = 599 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 18/284 (6%) Query: 3 APGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNL 62 P LPADQ S + Q + + +A + P D + +V G Sbjct: 61 RPALPADQ-------SEMTYTFQSIHKFTYAPRA---PKEWNVTDTDMVLLVREGAADIH 110 Query: 63 LEAKQQRLVEGEMLFIPARA-ANLPV-NNKPVMLLSLVFAPT--WLGLSFYDSRTTSLLH 118 A++ L G L+ PA ++ + +P+++ + F S+ SR + L Sbjct: 111 THARKYSLQAGMALYAPAGCGMHIINGSEQPLVMDRITFLALTPLASGSWTYSRGQAPLQ 170 Query: 119 PARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPR 178 I L + R G + L+ S I+ L+ ++V + P + Sbjct: 171 EEGIIHLAAPGRLFG--LADELSEAVSSSGPHKTIRA-SLAFYQWLAALVKLEPTSQHTD 227 Query: 179 GDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKA 238 S ++++D+Y + LTR+ +A + ++P H S+LF + F +Y+ +R+ +A Sbjct: 228 AGDWMESSLDYIRDHYWEDLTRDRLASMYGVSPEHFSRLFKRETGYSFTDYLCRIRIRRA 287 Query: 239 RMILQ-KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + +LQ ++E+A GF YF R F++ G P Y + Sbjct: 288 QELLQLHPQKMMNEIAFLTGFHSEHYFSRKFKQIIGAAPSVYRS 331 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 2/173 (1%) Query: 109 YDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVV 168 D L+ I+ E E + L+ N + + ++ +++ Sbjct: 355 IDKIKAKLIEIIGVIKRNLSYYAEDENFIE--NRELEEILKINDVDKIKFIFINTLKNLF 412 Query: 169 NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIE 228 ++ + D I +++DN+ + +T + VA+ N++ ++ SK F FI+ Sbjct: 413 ENIKTINKEKMDTFIAKIIRFIEDNFNKDITLDDVAKEVNMSYHYFSKFFKDQTGKNFID 472 Query: 229 YVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 Y+ +R+ KA+ +L+ +SI EV + G+ D +YF ++F++ G+TP EY + Sbjct: 473 YLTNLRVTKAKELLEDETVSIKEVCYKVGYSDPNYFSKIFKKATGMTPTEYRS 525 >UniRef50_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1J0_9CLOT Length = 544 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 88/176 (50%) Query: 105 GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLC 164 GL++ + + L +L + + + E + L L R ++ ++ L Sbjct: 358 GLTYTNVKIMCLDIYMLAAKLLAEKGKDTETAVKMLERLDRQAVKNTALEEFRKYLEQTL 417 Query: 165 RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTM 224 + + G L I +V ++Y++ ++ ++A F I P++LS+LF + M Sbjct: 418 CVISRQFDDRKKSSGKTLITDILAYVDEHYSKDVSLGTIAGKFFINPSYLSQLFKKEMNM 477 Query: 225 RFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 +FI+Y+ VR+ KA ++L+ L+++EVA+ G+ D+ YF +F + G TP +Y Sbjct: 478 KFIDYITDVRIKKALVLLETTSLTVNEVAEAVGYKDTRYFREIFVKHMGKTPSQYR 533 >UniRef50_C6J0N4 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J0N4_9BACL Length = 533 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 3/176 (1%) Query: 108 FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSV 167 Y+ L QI PSL G+A L +S + +Q + ++ Sbjct: 361 VYEWAIDLLDRLEEQIHSPSLN---GQAEPVKRAALYQSVYDCQTLQEIEAAIWRAAAHY 417 Query: 168 VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFI 227 + + + + L H +C + + Y +P+T +S++ ++PN+L +F M Sbjct: 418 LELLMERATDKNAKLVHQVCQIIDNTYHEPITIQSLSSQVYLSPNYLRSIFRDKTGMTIH 477 Query: 228 EYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +Y+ +R+ KA+ +L L + ++AQ+ G+ + YF +F + G+TP EY Sbjct: 478 DYLTRIRLEKAKEMLADPSLKVQDIAQKIGYESTSYFISLFVKNQGVTPNEYRKNL 533 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 100/242 (41%), Gaps = 8/242 (3%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTW 103 L L GE L + + +M+ + + + ++ L +V Sbjct: 37 HTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVAS 96 Query: 104 LGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLE---QNIIQPLVLSL 160 + F + T + R+ + + ML A S E Q++++ L++ L Sbjct: 97 MEFLFSKADTNYAIFNCRENR---ERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWL 153 Query: 161 LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQ 220 + + +++ + P + I ++ NY + ++ + +A+ ++ +L+ F + Sbjct: 154 VRC--TTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDLLAELAHLNKYYLAHTFQR 211 Query: 221 HGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + I Y+ R+ +++ +L S+ ++++ GF YF + FR+ G+TP EY Sbjct: 212 EYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTPNEYR 271 Query: 281 AR 282 + Sbjct: 272 RQ 273 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 104/238 (43%), Gaps = 14/238 (5%) Query: 48 FPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLS 107 F + VL GE ++ L +G+ I ++++ + W G S Sbjct: 40 FYLIHFVLEGEGDFYVKGAHYHLKKGQGFLIEPDTPATYISDE-----HHPWRYVWFGFS 94 Query: 108 ---FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLC 164 +D+ ++ L + I + + L H + ++ +L+L Sbjct: 95 GRCAHDTLSSIGLTQNQPIFTCEDGDKLKKYVFDMLAH----NTSGHADHYRLMGMLYLA 150 Query: 165 RSVVNMPPGNS--QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHG 222 SV+ + P G+ + +++Q++Y+ P+ E ++ + I ++ S LF Q+ Sbjct: 151 LSVIANAQKDKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSYFSDLFKQYT 210 Query: 223 TMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 M ++Y++ R+ KA+ +L LS+ +A CG+ ++ F ++FR+ GL+P Y Sbjct: 211 GMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTGLSPNAYR 268 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 104/250 (41%), Gaps = 13/250 (5%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLVFAP 101 D + ++ +G ++ + G+++F+ + +N+ + +++F Sbjct: 44 HWHDEVEIIVIKKGSGIVSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIMEYENILFKS 103 Query: 102 TWLGLSFYDSRTTSLLHPARQIQL-----PSLQRGEGEAMLTALTHLSRSPLEQNIIQPL 156 + L S YD + P L + Q ++TA+ + + L Sbjct: 104 SLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQL 163 Query: 157 VL--SLLHLCRSVVNMPPGNS----QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNIT 210 + L + ++V+ N + +I +++ +N+ + + E +A + + Sbjct: 164 SIKAHLFQILYTLVSNCGQNKIKPINQKSLKKIKTILSYIANNFQENIAIEDIANYCFYS 223 Query: 211 PNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRR 270 ++ K F + + FI+Y+ R+ A +L +I ++A GF + YF R F++ Sbjct: 224 KSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFKK 283 Query: 271 QFGLTPGEYS 280 ++G++P +Y Sbjct: 284 KYGVSPRKYR 293 >UniRef50_UPI0001789626 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789626 Length = 305 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 115/285 (40%), Gaps = 17/285 (5%) Query: 15 DLFSGLVLNPQLLGRVW--FASQPASLPVGSLCIDFPRLDIVLRGEYGNLL----EAKQQ 68 LF ++ + R + + Q + + D + ++ G + K Sbjct: 4 SLFQQMLEEGDYVPRFYAYYYKQWMNYEMPYHQHDSTEIMYMISGVCRIDVKAGDTEKSV 63 Query: 69 RLVEGEMLFIPARAANLPVNNK--PVMLLSLVF--------APTWLGLSFYDSRTTSLLH 118 L +GE + + A + + ++ +L++ F AP+ + + + LL Sbjct: 64 ILKKGEFMVLDAGVPHRLIVDQAASCRMLNVEFGFMESEGMAPSLRHIVGEEEEVSFLLK 123 Query: 119 PARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNII-QPLVLSLLHLCRSVVNMPPGNSQP 177 + + + Q + + + L + + ++ L + LL + + Sbjct: 124 RPFRYLVLADQEEVYPVLKSLVLELDQRGTDGRMMTHALFIQLLVCIARLYEERERSDMQ 183 Query: 178 RGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAK 237 + DF +++ NY + + + VA N+ P +L ++F + EY+ +RM K Sbjct: 184 QSDFYIKRSVDYLHQNYDRQIQVKDVAAEVNLHPGYLHRVFRRGTGRTITEYLTTIRMEK 243 Query: 238 ARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 A+M+L++ + IHE++ G YF +F++ G TP EY R Sbjct: 244 AKMLLEQTDIPIHEISDYVGVGSRQYFHMLFKKYTGSTPVEYRLR 288 >UniRef50_C0A2N9 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A2N9_9BACT Length = 354 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 73/288 (25%), Positives = 114/288 (39%), Gaps = 34/288 (11%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEY--GNLLEAKQQ--RLVEGEMLFIPARAANLP 86 W A + C FPR VL GEY + + + + GE+ +I NL Sbjct: 60 WEARRERH-GTSVSCTMFPRFIFVLEGEYRVIHDINDRSADRVVRTGELYWIRPNDWNLV 118 Query: 87 VNNKPVMLLSLVFAPTWLGLSFYDSR-----------TTSLLHPA--RQIQLP---SLQR 130 N+ P ++ ++ F P +Y + T + H +P +L+ Sbjct: 119 RNDAPRVVFAVSFTPDHTRFLWYHHKREPENSNVCLDTDNAFHTELWYHTHVPVSVALRY 178 Query: 131 G-----EGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPG--------NSQP 177 E + +L L Q ++ +LL C ++ + Sbjct: 179 AIGLIDEATTLDASLGKLGTDSERQELLHTTGEALLAWCLQELHADAQLAESARFSGTVS 238 Query: 178 RGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAK 237 + IC W+ + L R SVA F ++ +HL++LF H F+E+VR R Sbjct: 239 PSRRTFDEICAWITERLQHDLERHSVASIFRVSEDHLTRLFRTHAHCGFVEFVRAERFRL 298 Query: 238 ARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 A +L LSI EVA CGF S YF + FR+Q GLTP + + G Sbjct: 299 AERLLADSRLSIKEVAAACGFSLSAYFIKRFRQQHGLTPAAWRRQQTG 346 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 100/267 (37%), Gaps = 13/267 (4%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 P V+ P+ D + + G ++ + G + Sbjct: 17 PYSQYHVFNQQTAFQFPIHW--HDELEIIYIRNGSINITIDNELFTGTGGSFFIVNPGEL 74 Query: 84 NLP-VNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 + N+ +++F ++ D L P R + + + Sbjct: 75 HYMGSNDLNADYYTILFPLEFISFQSNDYVENMLFKPMRSSHVILTHSLPYSEIYAEIIS 134 Query: 143 LSRSPLEQNIIQP---------LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 L + N + L+L +L S+ ++ + D I +V DN Sbjct: 135 LLEKLIYINKYEKGFYQLDCKILLLEILSNILSIPDILVKKTSNASDMR-REIITYVNDN 193 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 Y + +T +A F+++ ++S+ F +H + F +YV +R+ A+ +L ++SI +VA Sbjct: 194 YLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVA 253 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYS 280 GFP+ YF R F+ +G TP Y Sbjct: 254 LSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_UPI0001788A43 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A43 Length = 516 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 68/132 (51%) Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 ++ LVL H R P + + +++ + +P++ + VA ++ N Sbjct: 384 VKKLVLQGFHALREEAMRHPVPESTLHERIVLQAVRYIKARFTEPISLQEVADEVAVSRN 443 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 + S+LF + FI+YV +R+ +A+ +L L ++EVA R GF D YF ++F++ Sbjct: 444 YFSELFKRVTGHNFIDYVIDLRLKRAKELLSTTSLRVYEVADRSGFNDVKYFSKLFKKMV 503 Query: 273 GLTPGEYSARFQ 284 G+TP EY + + Sbjct: 504 GMTPAEYQGQHR 515 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 104/269 (38%), Gaps = 14/269 (5%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 P + + + +L G L+ K V+ +++F+ + Sbjct: 18 PFEFHHIDHTHPRYVMSYHWHVE--YEIIRILEGSLTVTLDEKSFTAVKNDVIFVHSGIL 75 Query: 84 NLPVNNKPVMLLSLVFA-PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 + + + +VF T+L + + + P + +L ++ Sbjct: 76 HSGIP-HDCVYQCIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSDEHPQ-ILNCISV 133 Query: 143 LSRSPLEQNIIQPLVLS--------LLHLCRSVVNMPPGNSQPRGDFL-YHSICNWVQDN 193 L + E++ L + L+ + P + L + +++ N Sbjct: 134 LFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVLEFIEKN 193 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 YA P+T + ++ +++P + + F++ ++Y+ R+ +A + L SI E+A Sbjct: 194 YANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEIA 253 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 R GF D YF R F++ G+TPG+Y R Sbjct: 254 YRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 4/147 (2%) Query: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 +A+ + P+ I ++ + + + S + + ++ N Sbjct: 99 KALRIKVDDYLLKPIRPQKIVDILNEFIKDNKKRIE----ESNKNCTEEFQEVVEYIDKN 154 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 + +T + VA N + ++LSKLF + + F Y+ +R+ KA+ IL ++SI+E+A Sbjct: 155 FKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEILINSNISINEIA 214 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYS 280 G+ + +YFC+VF++ +TP EY Sbjct: 215 FSVGYNEPNYFCKVFKKIVNMTPSEYR 241 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 66/129 (51%) Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 I+ L ++H+ S ++ + L +++ ++Y + + E++A ++ P+ Sbjct: 282 IEDLSYWVIHMLDSFTQNVFNFNESKNPVLIQKCISYINEHYNEDINLETIANIVHLNPS 341 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 + S +F + + F Y+ +R+ +++++L+ SI E+A GF D YF +VF+ Sbjct: 342 YFSSIFKKEVGVSFSNYLNKIRIEQSKLLLKNTDSSIVEIALEVGFEDQSYFSKVFKNLT 401 Query: 273 GLTPGEYSA 281 +TP +Y Sbjct: 402 KMTPKQYRQ 410 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 107/290 (36%), Gaps = 22/290 (7%) Query: 12 FFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEA-KQQRL 70 F+ F+ L N + P + L V G NL ++ L Sbjct: 42 FYNISFNRLKENIAVTMH--GPPDPFDAEGLMHNHGYFELVYVYHGSCVNLFPNQERIVL 99 Query: 71 VEGEMLFIPARAANLPVNN-KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQ 129 +G++L + A + P + + ++V P S + + L + Sbjct: 100 NQGDILLLNPNALHCPYTTLEDDYIFNIVLKPKLFEKSMLSLLSDNPLFSNFFVNYMYRV 159 Query: 130 RGEGEAML----------TALTHLSRSPLEQNIIQ------PLVLSLLHLCRSVVNMPP- 172 + ML + ++ + + L++ L R Sbjct: 160 NKARDYMLFHTNGEKRIAQTMENIITELYSKEMCYRRAAEAELIVLFTCLARIYKEQLGL 219 Query: 173 GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRW 232 + I ++ +N++Q T +SVA F + ++LS++ +H F E + Sbjct: 220 KGFDEVKNKQVTDIITYMDENFSQA-TLQSVADHFGYSTHYLSRMIKKHTNKNFSEIIHS 278 Query: 233 VRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 ++ A L+ + + E+A+ GF D+ YF +VF++++G +P EY + Sbjct: 279 FKLENACTYLETTDIPMREIAELVGFNDASYFHKVFKQKYGQSPAEYRKQ 328 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 105/263 (39%), Gaps = 21/263 (7%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP--VMLLSLVFAP 101 +F L + +G + E + G++ I + + + +++++F P Sbjct: 34 HRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYTVEQSEGMEVVNVLFVP 93 Query: 102 --------------TWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL--THLSR 145 +++ + + S + ++ L Q + +L L + ++ Sbjct: 94 ALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMMDIRGILEQLMKEYGNK 153 Query: 146 SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPR---GDFLYHSICNWVQDNYAQPLTRES 202 Q +I+ ++ L + + +S P + IC +++ + A PL+ E Sbjct: 154 ESGYQFLIKSKLIELFIILSRIYANNRNHSLPSIQNDGEMIARICEFIKRHQAHPLSLEQ 213 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 ++Q ++ + + LF Q M F+E+ R+ A+ +L I +A G+ D Sbjct: 214 ISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASSDKIARIALDTGYEDLS 273 Query: 263 YFCRVFRRQFGLTPGEYSARFQG 285 +F VF++ G TP Y R +G Sbjct: 274 HFNHVFKKLTGETPSLYRKRMKG 296 >UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969E72 Length = 291 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 99/272 (36%), Gaps = 15/272 (5%) Query: 24 PQLLGRVWFASQPASLP---VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 PQ R + P +G L V+ G L+ + + GE++ IP Sbjct: 2 PQSERRSFTFENVHLAPDEQIGLHQQSTWELSYVIVGSGMRLIGDMTEPFLGGEVVMIPP 61 Query: 81 RAANL-------PVNNKPVMLLSLVFAPTWLG--LSFYDSRTTSLLHPARQIQLPSLQRG 131 + + +++ F +L + + ++ + Sbjct: 62 EIPHCWYFEDDDTDEQGRIANITVTFDNDFLDRCSGTFPELCGHIDKLKKKYDAVKFDKE 121 Query: 132 EGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQ--PRGDFLYHSICNW 189 + EA++ L + E + ++ +L + S G Q + + I + Sbjct: 122 KSEAIIDLLEEMCNQS-EAERVASMIKLILIMADSGSEHVVGKYQRIDKETKRMNQIQTY 180 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 V N + +T + VA++ + F + F+ Y+ R+ A +L++ +++ Sbjct: 181 VICNAKRDITLDDVARYVGMNRASFCIFFKKATGKTFVTYLNEYRIGLACQLLKQKRMTV 240 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 E+ GF + YF R F+R G++P EY Sbjct: 241 SEICYNVGFNNVPYFNRTFKRHKGVSPCEYKQ 272 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 101/284 (35%), Gaps = 24/284 (8%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 F N ++ ++ + D L + G L + R+ Sbjct: 10 FELPIETYTDNCEIFHSLY-----------NHWHDEMELIYIESGSGLVRLNKEILRVKA 58 Query: 73 GEMLFIPARAANLPVNNKPVMLL--SLVFAPTWLGLSFYDSRTTSLL--------HPARQ 122 G+++ + + + +L S+VF +L D ++ Sbjct: 59 GDLIIVNRGVLHGIKTDLKNILYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHI 118 Query: 123 IQLPSLQRGEGEAMLTALT--HLSRSPLEQNIIQPLVLSLLH-LCRSVVNMPPGNSQPRG 179 I G + + H + P ++ L S + + P + + Sbjct: 119 ISRSDDNYGNICLLFDRIHSCHKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDENKS 178 Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 I +++ NY+QPLT + N + + KLF Q+ I Y+ +R+ KA+ Sbjct: 179 LASIKKILDYINLNYSQPLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAK 238 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +L S+ E+A GF ++ YF + F++ G++P ++ Sbjct: 239 PMLLHSDSSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRNL 282 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 5/141 (3%) Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 L+ L + E+ Q V +++ L ++VV D + ++++ N+ + ++ Sbjct: 387 LSALLAAGEEETARQKFVAAMVELAQAVV-----IKNQEPDGIITRAQDYIRQNFRKDIS 441 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 E VA+ I+P + SKLF + M F EY+ +R+ A+ +L + LSI +V G+ Sbjct: 442 LEEVARTVGISPYYFSKLFKEEAGMNFTEYLTGIRIETAKRLLSERELSIKQVCVDSGYA 501 Query: 260 DSDYFCRVFRRQFGLTPGEYS 280 + +YF R+F++ G+TP E+ Sbjct: 502 NPNYFSRIFKKWVGITPTEFR 522 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 105/271 (38%), Gaps = 24/271 (8%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL--PVN 88 ++ Q +G D+ V+ G + +G+++ + A + + Sbjct: 24 YYYKQWEDFHMGFHQHDWTEFMYVISGNCTVETNKDVIAMRKGDLIMLDAGVPHRLIVES 83 Query: 89 NKPVMLLSLVFA--------PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL 140 P +L++ F P+ L+ ++ + LL +L ++ + E + L Sbjct: 84 GSPCRMLNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQ----RLDTIVLRDYEDIQVNL 139 Query: 141 THL---------SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRG-DFLYHSICNWV 190 +L + + + L+ LL +V + NS R ++ Sbjct: 140 RNLVFELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHYVRQATEYI 199 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 Y + + +A N+ P +L ++F + EY+ +RM KA+M+L + + I Sbjct: 200 HQYYDTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLLARTDVPII 259 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 EVA G YF +F++ G++P EY Sbjct: 260 EVADHIGLNSRQYFSMLFKKMTGISPAEYRK 290 >UniRef50_A4XFU2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFU2_CALS8 Length = 508 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 87/178 (48%), Gaps = 9/178 (5%) Query: 107 SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRS 166 + Y +L A++I P L+ ++M +L + +E+++I+ +H C Sbjct: 339 NVYKKLFDLILTKAKEI-CPVLKDEFAKSMAFSLNMQESNNIEKSLIE-----FVHYC-- 390 Query: 167 VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRF 226 ++ + R + +++ NYA + +A+ ++PN+ K+F + F Sbjct: 391 -IDKIQNVKESRHKKIIKDAITYIERNYANQIFLSDIAEVCGVSPNYFCKIFKEETGKSF 449 Query: 227 IEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ++++ +R+ KA+ +L +L +EVA++ GF D YF +F++ G +P ++ Q Sbjct: 450 VDFLNELRINKAKELLLSTNLKSYEVAEKVGFNDYKYFSMIFKKYTGTSPSKFKEERQ 507 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 108/270 (40%), Gaps = 14/270 (5%) Query: 22 LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGN-LLEAKQQRLVEGEMLFIPA 80 LN L + + + F L V+RG + + + +++ I Sbjct: 11 LNRLKLLYIDSSRFDSDWHSTLHSHPFAELMYVVRGSGYFRFADNLKLPIQADDLIIINP 70 Query: 81 RAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL 140 + ++ L +V LG+ + T HP I + E + A+ Sbjct: 71 NVLHTECSDAEGGLEYIV-----LGIDGVEFYTEQNAHPGVSIHNYEDYKHEILFYIKAI 125 Query: 141 THLSRSPLEQ------NIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNY 194 ++ E N+++ LVL+ + S++++ D ++ + +++ +Y Sbjct: 126 LEAGKTHDEMSELIVENLLRVLVLNTMRRTTSLLDVETSTGGDNKDCIF--LEHYLNLHY 183 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 + +T + +A + +LS +F + + I+Y+ RM +A+ +L LSI +++ Sbjct: 184 RENITLDHLASLTFLNKFYLSHIFKEQTGLSPIDYLLRKRMIEAKKLLINTDLSITQISD 243 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 GF YF + F+ ++P + + + Sbjct: 244 IVGFRSPSYFSQFFKNMECMSPSSFRNKHK 273 >UniRef50_C6J3C3 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3C3_9BACL Length = 295 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 102/272 (37%), Gaps = 20/272 (7%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNK 90 +F + + F + +V GE + + R+ + ++ +PA ++ Sbjct: 14 YFNRVEETFDLQMHSHRFVEIVLVDEGEGFHFINEDIVRVTKNDVFLLPAGTRHVFRPGH 73 Query: 91 -----PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQI-----------QLPSLQRGEGE 134 P+++ + ++ P L L +R L G Sbjct: 74 AGSRRPLIVYNCLYEPGKLLSCLEHLPGFHELIRSRPYLFEGAAPPSPGWLHLRDGGSPW 133 Query: 135 AMLTALTHLSRSPLEQNIIQPLVLSLLHLC----RSVVNMPPGNSQPRGDFLYHSICNWV 190 + + + + + L + L R + + ++ + + + + Sbjct: 134 NIWFRGAYREFTERKPGYLLQLYGRFIELAVMLERHLERLGSSSAAEPENRMMEEVLRRI 193 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 +YA L+ S A +++ H +LF Q+ F +YVR RM ++R +L L + Sbjct: 194 DTDYASRLSARSFAAATHLSERHFHRLFRQYAGCTFHDYVRNKRMERSRELLASTRLPVM 253 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 E+ + G+ D +F +F++ G++P EY + Sbjct: 254 EIMRSVGYADKKHFLSLFKQSTGVSPTEYRRQ 285 >UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicutes RepID=Q2BDI9_9BACI Length = 525 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 162 HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQH 221 HL R V ++ + D LY +++ +YA+ LT ES A++ +++P + SKLF Sbjct: 405 HLLRIVRHVQAWRNSHAKDMLY-KAKEYIEAHYAEALTLESAAEYVDLSPFYFSKLFKDR 463 Query: 222 GTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 M FI++V VR+ KA+ L++ LS+ E+ G+ D +YF RVF++ GL+P EY Sbjct: 464 FGMTFIDFVTDVRIRKAKHFLKEGSLSLKEICYSIGYKDPNYFSRVFKKHTGLSPTEYRK 523 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 112/270 (41%), Gaps = 18/270 (6%) Query: 29 RVWFASQPASLP------VGSLCI-DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 ++ F P C DF L + G L+E ++ L +G++L Sbjct: 14 QILFVIDGWCSPEIPVPETNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPG 73 Query: 82 AANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT 141 + + L T L L F + + + + + + + E + Sbjct: 74 VYHQELFEANTNCRELHIGLTNLNL-FSNVKKDYIDIGNKNVLTFTKYKDEILKSCLEIV 132 Query: 142 HLSRSPLEQN--IIQPLVLSLLHLCRSVVNMPPGNSQPRG--------DFLYHSICNWVQ 191 ++ + + +++ LV+ LL L +N + L SI ++ Sbjct: 133 EEQKTYNQTSPFMLKSLVMKLLVLLYREINEEDTTRDSKEFSFKSREKKALVESITKYLT 192 Query: 192 DNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHE 251 +NY + ++ ++++ ++P ++SK+F + I Y+ +R++KA+ +L LSI Sbjct: 193 ENYTEDISLYTLSKNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKS 252 Query: 252 VAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +A+ G+ D YF +++++ +G++P + Sbjct: 253 IAKMVGYSDPYYFSKLYKKYYGVSPNKSRN 282 >UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H973_9FIRM Length = 271 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 95/250 (38%), Gaps = 24/250 (9%) Query: 49 PRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSF 108 R+ +V G + + GE L + L ++ + AP LG F Sbjct: 33 CRIILVSGGSFTL--------VRGGESLLVNPGCVLLLGPGGGLLQQAGHIAPELLGCRF 84 Query: 109 -----------YDSRTTSLLHPARQIQLPSLQRGEGE--AMLTALTHLSRSPLEQNIIQP 155 L P Q L + G +L + P +I Sbjct: 85 PAGVLPVLKNLMQRDFMPLFEPGAQTALYGPVQWSGRLRTLLGMMQSAESEPESPGMIYL 144 Query: 156 LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 + +LH + +PR + IC ++ NY Q + VA F ++P +LS Sbjct: 145 TL--ILHYVEQECRSEKQDIRPRNET-VEQICAYLAANYQQKFSLTDVAARFYLSPYYLS 201 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 +LF + ++Y+ R+ A+ +L+ L+I VA++ GF + +F RVFR G Sbjct: 202 RLFRRVTGQSIVDYINGRRIEAAQRLLESTDLNISAVAEQTGFASAAHFRRVFRETMGTG 261 Query: 276 PGEYSARFQG 285 P +Y +G Sbjct: 262 PLQYRKSHRG 271 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 64/126 (50%) Query: 158 LSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKL 217 L + + + + + ++Q++YA PLT E V+ + ++ S L Sbjct: 407 CCLRGMLSEAMQVLSEQKRQADTRPIRTAKQYIQEHYADPLTLEWVSNIVGFSGSYFSSL 466 Query: 218 FAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPG 277 F + F+EY+ VRM +A+ +L++ +LS+ EV R G+ D YF + F++ GL PG Sbjct: 467 FKKETGQNFLEYLSEVRMNRAKELLRETNLSVAEVCVRVGYSDLKYFTKSFKKATGLKPG 526 Query: 278 EYSARF 283 E+ + Sbjct: 527 EFRKLY 532 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 98/241 (40%), Gaps = 7/241 (2%) Query: 45 CIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLVFAPT 102 L +V +G +++ ++ +G ++ +R + + ++ + Sbjct: 4 HDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNLVTYCIAIGGL 63 Query: 103 WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLH 162 + D P +Q E +++ A+ ++S E I L ++L+ Sbjct: 64 RIDGLPADHLLPDGYCP---VQPLRQHFAEVQSLFDAIEKEAKSHAE--IANYLTMALIT 118 Query: 163 LCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHG 222 + + + + L ++ NY + + +A + +LS LF Sbjct: 119 KLAAFLREEGLQEEQQTPTLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHLFKAEI 178 Query: 223 TMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + ++YV R+ +A+ +L ++I ++A + G+ +S+YF VF+ +TPGEY + Sbjct: 179 GLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPGEYRRK 238 Query: 283 F 283 + Sbjct: 239 W 239 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 106/259 (40%), Gaps = 19/259 (7%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP-VMLLSLVFAPT 102 ++ L V RGE + + RL +G+ + + + P ++ +++ + Sbjct: 73 HNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTEHPQDVVFNIMLSKE 132 Query: 103 WLGLSFYDSRTTS------LLHPARQIQ-------LPSLQRGEGEAMLTALTH--LSRSP 147 + T + L Q+ P + E ++ + + Sbjct: 133 IFQSDVFPCMTDNRLLFHFFLDYFYQLNKLDDSLTFPHSPKHPIEPLIKLMVEEFIEDDL 192 Query: 148 LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD--FLYHSICNWVQDNYAQPLTRESVAQ 205 ++I+ + L V ++ + + +Q + Q L+ ES+A+ Sbjct: 193 CYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIHLIYHMQQHLRQ-LSLESLAE 251 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 F+ +P+H+S+LF + E + +R+ A+ +L+ L + E+A G D+ Y Sbjct: 252 AFHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEIADSIGVNDTSYLN 311 Query: 266 RVFRRQFGLTPGEYSARFQ 284 ++F++++GLTP +Y +FQ Sbjct: 312 KIFKKKYGLTPLQYRKQFQ 330 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 9/259 (3%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNK 90 + ++ ++PV S + ++ G+ ++ + + EG+++ I + N + Sbjct: 17 YRKARSHNMPV-SHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVIISPNILHRTTNTE 75 Query: 91 PVMLLSLVF---APTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL---S 144 L+ S+ D ++ R E ML + Sbjct: 76 TPEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIETMLQTMIAEMSEK 135 Query: 145 RSPLEQNIIQPLVLSLLHLCRSV--VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 + E + + LL CR +M S + ++ +Y L+ Sbjct: 136 KPGFELYALTLALQLLLICCRHAKSSSMETLESPSPMHERISEVVRYMNSHYMNELSLHL 195 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 +A+ F ++P +LS+ F + F+EY+ VR+ +A+ +L++ + ++ +A+R GF Sbjct: 196 LAEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVNLIAKRVGFGSVT 255 Query: 263 YFCRVFRRQFGLTPGEYSA 281 +F RVF+ G P Y Sbjct: 256 HFGRVFKSVTGYVPLHYRK 274 >UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ07_CALS8 Length = 283 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 9/275 (3%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 + L ++ + +S + D L V +G +E ++ L G++ Sbjct: 1 MIEMLNNIMPVIVKTLERVHDSSWKMDYNVHDSYELIFVKKGNIEFWVEDEKIELRAGDL 60 Query: 76 LFIPARAANLPVNNKPVMLLSLV----FAPTWLGLSFYDSRTTSLLHPARQIQLP----- 126 L I + +V P L I P Sbjct: 61 LIIKPHTRHKFEVVGNFKAEFIVMGFYLKPESKSKIEALKEIYGFLESLENISSPFYFIH 120 Query: 127 SLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSI 186 +R L ++ ++ + ++ + L +N + I Sbjct: 121 IRKRSNVFFCLESILQEAKENKKGLLLYIKSIELFIYITREMNNLEIKKGFDYSKIAKFI 180 Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 +++ NY + + +A+ ++ + +S+LF + EY+ R+ KA+ L + Sbjct: 181 KDYIDQNYMEDIKIGDIAKKLFMSESSISRLFKSQFGILPKEYLLSKRIEKAKEYLSVSN 240 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 L I E+A CGF F +F++ G +P Y Sbjct: 241 LKISEIAIMCGFSSLQRFNDIFKKYTGCSPTHYRK 275 >UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YSB8_ANASP Length = 306 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 102/274 (37%), Gaps = 19/274 (6%) Query: 22 LNPQLLGRVWFASQPASLPVGSLCIDFP----RLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 L + + + S L + RL+ +L G + +G++ Sbjct: 40 LRLDVHQQPGHETPEHSPQQHVLTVSLDQQIVRLERILDGRLQYE------NIAKGDVAI 93 Query: 78 IPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLP-SLQRGEGEAM 136 IPA+ ++ L L P + ++ + + P L + G A+ Sbjct: 94 IPAQTHHISRWQSETKFLVLSVEPAFFTRMVIEAGDLQKIEIKPRFAAPDPLVQQIGLAL 153 Query: 137 LTALTHLSRSPLEQNIIQPLVLSL-LHLCRSVVN-----MPPGNSQPRGDFLYHSICNWV 190 T L + I+ L +L +HL + + + + + +++ Sbjct: 154 QTELESEHKG--SSIYIESLTTTLCIHLLKHYCVTGGTILDDHHHKGLSHWKLRQAISYI 211 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 +N Q LT ++ ++ + S+ F Q +YV R+ +A+ +L + +I Sbjct: 212 HENLDQDLTLVDISTAVGMSMYYFSRQFKQSTGFAPHQYVMNCRIERAKKLLGSTNKTIE 271 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ++ + GF +F VFR+ G+TP Y + + Sbjct: 272 QICTQVGFQSQSHFTNVFRKLMGITPRVYREQVK 305 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 107/276 (38%), Gaps = 17/276 (6%) Query: 23 NPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 N QL V+ S S D +L G ++ K + G+ + IP + Sbjct: 17 NMQLPLEVYNVEFRNSADFYSHWHDEMEFIYILNGSAEICIDFKIFSVTTGDFIIIPNGS 76 Query: 83 ANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL----PSLQRGEGEA- 135 + + N + ++LVF + + + D + ++P + +L G A Sbjct: 77 IHYMIGKENSKISYVALVFNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVGHAK 136 Query: 136 MLTALTHLSRS------PLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL----YHS 185 ++ + ++ S + I L + + NS+ D + Sbjct: 137 IVNSFNNIIESYNNKSYGFQLEIKGSLFSIFSTIFKEGYISLNLNSENYSDLIKVENLKE 196 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + ++Q NY P++ + +A + H + F +Y+ + R+ KA ++L Sbjct: 197 VIKYIQTNYKNPISIKELADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATLLLFDT 256 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +LSI E+A GF D YF + F++ ++P +Y Sbjct: 257 NLSITEIAYEVGFGDVSYFIKTFKKFLSISPTKYRK 292 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 100/250 (40%), Gaps = 10/250 (4%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VNNKPVMLLSLV 98 + S ++ + + GE ++++ + GE++ + N+ P + L Sbjct: 40 MKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRIVLY 99 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSP--LEQNIIQPL 156 F + + +L + + R + ML L +P ++ + L Sbjct: 100 FESSEVA---SKELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRTL 156 Query: 157 V-LSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 + + L + P + G I +++ +Y + +T E +AQ F ++ +L Sbjct: 157 LNMFLFTMLMHTRRREPEQMEETGRT--TQIVSYIHSHYQEDITLEQLAQKFYVSQFYLC 214 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 + F ++ ++YV R+ A+ L + +I E+++ GF + +F RVF+ G T Sbjct: 215 REFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGTT 274 Query: 276 PGEYSARFQG 285 P Y Q Sbjct: 275 PSGYRKHHQN 284 >UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWT0_CLOB8 Length = 263 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 102/243 (41%), Gaps = 5/243 (2%) Query: 38 SLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSL 97 + + + V+ G + Q L GE+ + ++ ++ Sbjct: 23 NFSFPPHLHPYVEIAYVIEGSIEVTINDTQCCLKAGEVSICFPNDIHTFNSDGFSKIILF 82 Query: 98 VFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLV 157 +F+P L SF+ R L ++ ++L L +S + +I+ L+ Sbjct: 83 IFSPD-LTRSFFGIRMDKTLENP--FMSKNIVDDGISSLLYMLHDEYKSVNNKYVIKGLL 139 Query: 158 LSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKL 217 ++L S + S + ++ +++ +Y + ++ +S+A+ + +LS++ Sbjct: 140 YTILGKLDS--HFTFKKSSTFYNSTMQNLLKYIEIHYHEKISLDSIAKDLGFSKFYLSRI 197 Query: 218 FAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPG 277 F+ +F +Y+ +R+ KA+ +L + L + +A CGF F R+F+ LTP Sbjct: 198 FSNKIGYQFNDYINRLRINKAQKLLSETDLPVTIIALECGFESQRNFNRIFKELTALTPT 257 Query: 278 EYS 280 ++ Sbjct: 258 KFR 260 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 107/265 (40%), Gaps = 11/265 (4%) Query: 26 LLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL 85 L + + + F L V+ G+ +++ ++ + + + I + + Sbjct: 19 RLESITKSKYDSDWHSTLHTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHT 78 Query: 86 PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSR 145 V++ L +V L S HP L R E + +L L + + Sbjct: 79 EVSSPDSPLEYIVVGIQGLSFSNLTP-VDQGGHPFSFFNL----RDEQKDILRYLNAMVQ 133 Query: 146 SPLEQNIIQPLVLSLLHLCRSVVNMPPG------NSQPRGDFLYHSICNWVQDNYAQPLT 199 Q + LV L + + S + I ++++ Y + + Sbjct: 134 EATNQALSYDLVCHNLLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQ 193 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 E++A +++ ++S F + M +EY+ +R+ +++++L+ + SI +VA GF Sbjct: 194 LEALASMTHLSRFYISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFT 253 Query: 260 DSDYFCRVFRRQFGLTPGEYSARFQ 284 YF + FR+ G++P +Y ++Q Sbjct: 254 TPTYFSKQFRKITGISPTDYREKYQ 278 >UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Clostridium RepID=Q187Y6_CLOD6 Length = 298 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 105/253 (41%), Gaps = 12/253 (4%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN-NKPVMLLSLVFAPT 102 + ++ + G ++V G ++ + + + + + S+ PT Sbjct: 34 HWHEHLQIYYFIDGIAYLECGLDNFKVVPGNIVIANSNELHYLESLSDNLKFYSIRIEPT 93 Query: 103 WLGLSFYDSRTTSLLHPA--RQIQLPSLQRGEG---EAMLTALTHLSRS------PLEQN 151 +L + D T L P I +L + + + + T L ++ N Sbjct: 94 FLFSNQVDLLQTKYLAPLALNHIVFNNLIQNDSLILKCITTILDEYHNKEVGYELSIKAN 153 Query: 152 IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITP 211 I Q +VL L + + + + I + +++ Y +T + +A N++ Sbjct: 154 IYQLIVLLLRSHIDKIYSEDEFIKRKYSLEKFECIFDLIEEKYMDKITLKELASRVNLSA 213 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 +H + F Q I+++ +R+ KA L++ L++ E+A RCGF +YF R+F+R Sbjct: 214 HHFCRTFKQITGKTTIDFINGIRLDKAIYYLKETDLNMTEIAMRCGFDSINYFSRLFKRN 273 Query: 272 FGLTPGEYSARFQ 284 + ++P +Y + Sbjct: 274 YNISPTKYRNEHR 286 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 103/263 (39%), Gaps = 14/263 (5%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP-VM 93 + P ++ + G + +++ + + + ++ Sbjct: 27 NGQNFPRHWHEH--LQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLESTSDNLV 84 Query: 94 LLSLVFAPTWLGLSFYDSRTTSLLHP--ARQIQLPSLQRGEGE--AMLTA--LTHLSRSP 147 ++ F P++L + D T L P +I+ +L + E ++ + + ++ Sbjct: 85 FYTIRFEPSFLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKI 144 Query: 148 LE----QNIIQPLVLSLLH-LCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 + I LV++LL + ++ + + + ++ Y + +T Sbjct: 145 GYELAIKGYIYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSK 204 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 +A ++ +H + F Q +Y+ +R+ K+ L++ +I E+A CGF + + Sbjct: 205 LANTVGLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGN 264 Query: 263 YFCRVFRRQFGLTPGEYSARFQG 285 YF R+F++ +P +Y ++ Sbjct: 265 YFSRIFKKYHSTSPSQYRNLYKN 287 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 106/262 (40%), Gaps = 11/262 (4%) Query: 30 VWFASQPASLPVGSL---CIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP 86 + + + P+ S D ++ + G +E + L G+ Sbjct: 21 LCYWGKERCAPLHSFGPGVRDIYKIHFIHSGRGIVKVEGETFELTGGQAFLAYPERVIFY 80 Query: 87 VNNK--PVMLLSLVFAPTWLGLSFYDSRTT--SLLHPARQIQLPSLQRGEGEAMLTALTH 142 ++ P + F + +R T S + P +P L EA ++ Sbjct: 81 QADEVDPWTYSWIGFNGEQVAEILSRTRLTPASPVLPMDTHLMPQLYELLNEA---EESN 137 Query: 143 LSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 +R Q ++ + L+ L + + +Q + D H +++ +Y++ ++ Sbjct: 138 TTRDLRLQTLLYEFMTLLVELVPASGDADSTRTQAK-DAYIHRCLDFLHSHYSEEMSVGQ 196 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 +A + +LS LF + M +Y+ RM KA +L+ H SI EVA+ G+ D+ Sbjct: 197 LAAIVGLDRKYLSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDAL 256 Query: 263 YFCRVFRRQFGLTPGEYSARFQ 284 F ++F++ G +P +Y ++Q Sbjct: 257 LFSKMFKKTVGTSPSDYREQWQ 278 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 100/266 (37%), Gaps = 13/266 (4%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN-N 89 +A + V + + G + + L G+ +FI + A + Sbjct: 44 CYAEDLSCFSVAWHWHEEFEFILAALGPIHVDVNKTRLTLQTGQGVFINSGALHAVEPAE 103 Query: 90 KPVMLLSLVFAPTWLG---LSFYDSRTTSLLHPARQIQLPSLQRGEGEA-----MLTALT 141 +L S VF P +G F+ LL P + + + A Sbjct: 104 GRALLHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFFLLDEAVPWQRQVLLCLREAWK 163 Query: 142 HLSRSPL--EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRG--DFLYHSICNWVQDNYAQP 197 ++ P E + L +L L V+ S+ + +V+++YA+ Sbjct: 164 GVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQEQIASERMKQMLRYVEEHYAEE 223 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 LT E +A ++ + + F Q + I+YV+ R+ KA +L+ L EV CG Sbjct: 224 LTVEKLAGCVALSESACLRSFRQFLGITPIQYVKQFRVEKAAELLRSTRLKTGEVGLECG 283 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSARF 283 F D+ YF + FR TP EY RF Sbjct: 284 FSDASYFIKTFREIKHCTPREYRIRF 309 >UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Thermoanaerobacterales RepID=B0K339_THEPX Length = 365 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 1/154 (0%) Query: 131 GEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWV 190 GE +L T R E + + + ++ V + L + Sbjct: 211 GENADILFKETDPWRQISELSTKEKFREWMRNIIEVVCEYVSLTKNSKNRKLIDEAIKLI 270 Query: 191 QDNYAQ-PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 Q+NY+ ++ S+A+ ITPN+LS LF + F +Y+ R+ KA+ +L+ + I Sbjct: 271 QENYSDLNISLNSIAEKLYITPNYLSTLFKSEMGVTFSDYLTACRIEKAKELLKDVKVKI 330 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +EVA+ G+ D YF +VF+ G TP EY + Sbjct: 331 YEVAEAVGYTDQHYFSKVFKNITGFTPKEYREKI 364 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 109/257 (42%), Gaps = 17/257 (6%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLVFAP 101 + + ++ +G ++++ G++LF+PA A + + + L++V+ Sbjct: 40 HWHEHFEIIVMQQGSAVFHIDSESYEAHPGDVLFVPAGALHVGYSLCEGDLSYLAIVYNS 99 Query: 102 TWLGLSFYDSRTTSLLHP--ARQIQLPSLQRGEGEAMLTALTHLSRSPLE----QNIIQP 155 + DS T + P ++QLP + L ++ E Q Q Sbjct: 100 SLFQNWMQDSLHTKYVLPYLEGRVQLPVKPTRLDPSCADYYYLLEQANSEFKAKQPAYQL 159 Query: 156 LVLSLLHLCRSVVNM---------PPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQF 206 +V S LH+ ++++ N + ++ +++ N+A T A+ Sbjct: 160 MVKSQLHMLLTLLSRKFLPHQLPEQATNQYVHNREQFKALIEYIEANFADKQTVADAARR 219 Query: 207 FNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCR 266 N+ +H K+F + FI+YV R+ +A +L LSI E+A G +S+YF + Sbjct: 220 MNLNVHHFCKMFKKLTGRTFIDYVNVCRVNEAERLLLAGDLSITEIAGCVGCDNSNYFTK 279 Query: 267 VFRRQFGLTPGEYSARF 283 ++++ G+ P + + Sbjct: 280 MYKKYKGVAPSQLRKQL 296 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 110/277 (39%), Gaps = 16/277 (5%) Query: 19 GLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI 78 G L P + + +A + +L G +E K+ + GE LFI Sbjct: 14 GTALIPIAIRHLNYAEGLENF-FYLHWHSEFEFVYILSGAILYSIEDKEYCVKAGEGLFI 72 Query: 79 PARAAN--LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQ--------IQLPSL 128 + + N P ++F P G + S + ++P + + Sbjct: 73 HSNQLHAARSFNGMPCEACVVLFHPNLFGHNKQSSTYSKFIYPILEGDLVFENYFKCEEE 132 Query: 129 QRGEGEAMLTALTHLSRSPLEQN--IIQPLVLSLLHLC-RSVVNMPPGNSQPRGDFL--Y 183 + +L+ L L + +N +++ + + HLC ++ V + P + R L Sbjct: 133 WQRLVMKLLSELDDLKYENVSENELLLKSKIFEIWHLCYKNSVALAPQGRKNRNYKLERM 192 Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 + N++ +NY + +T ++A+ ++ F + + I YV R+ ++ +L Sbjct: 193 QPVLNYIHENYKEEITLMALAKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQSCTLLT 252 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + I ++A+ GF + YF R F + G +P +Y Sbjct: 253 ETDWKIADIARNVGFNNISYFNREFIKAIGCSPSKYR 289 >UniRef50_D1N5H4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5H4_9BACT Length = 285 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 109/263 (41%), Gaps = 5/263 (1%) Query: 27 LGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAK----QQRLVEGEMLFIPARA 82 + R++FA R + GE A + GE++ A Sbjct: 20 VERLFFAEPQPEPETWIHLHPCFRFIQPMTGEKEVRYAAGGRIGTRLFHPGEVIIGRPGA 79 Query: 83 ANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 + N ++S+VF ++ + + +++ + AM + Sbjct: 80 WIDELWNHGHEMISVVFFEKYVRALYIGHDGLRPPQKGPDVFFHTVRPADA-AMHATIQA 138 Query: 143 LSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 L + + + + +LL + ++ S P + L++ + +++Q + ++RE Sbjct: 139 LLAAGSDSRAARLNLRALLEMVLELLYRERETSIPEEELLWNRVFDYLQYTFCNDISRED 198 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 +A I P LS+L + EY+ +R+ A +L++ L + E+A +CGF Sbjct: 199 IAAGAGIHPARLSRLVRSRTGLAVREYLNRMRLEYAVQLLRESRLPVEEIAVQCGFNYPS 258 Query: 263 YFCRVFRRQFGLTPGEYSARFQG 285 YF R+FRR++ ++PGE+ R + Sbjct: 259 YFIRLFRRRYRISPGEFRRRKEN 281 >UniRef50_C9A5A5 Predicted protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A5A5_ENTCA Length = 794 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 6/245 (2%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFA 100 + + +L+G+ K++ L ++ F+ A + + + L F Sbjct: 22 QQVFSENQNLVIHLLKGKLQLQFTDKKETLAAKDLFFMKANTSVSLKSTTNETYVLLYFV 81 Query: 101 PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRS--PLEQNIIQPLVL 158 T L S D T ++Q S Q E+ L ++L S L+ +++ Sbjct: 82 STSLLNSVLD--MTRYTFKTEKVQPYSQQEKINESSLQIASYLKESGGNLDFHLLALSAN 139 Query: 159 SLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLF 218 L HL ++ + P N D + I ++++ N + +T + +A +FN++ + S+ F Sbjct: 140 FLDHLSKTALIYQPLNKAT--DTRMNEILHYLETNMTKIITLDEIAAYFNVSSAYFSRFF 197 Query: 219 AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGE 278 + + F EY+ +R+ KA ++ I +A + GF + + F R F+ ++G TP + Sbjct: 198 KKQVGINFTEYLTNLRLEKAAAAIRSSSEQISVIADQTGFVNINGFNRKFKERYGYTPRD 257 Query: 279 YSARF 283 Y +F Sbjct: 258 YRKQF 262 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 106/245 (43%), Gaps = 8/245 (3%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPT 102 L L GE LL + + +M+ + + + ++ L +V + Sbjct: 67 VHTHSCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVS 126 Query: 103 WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLE---QNIIQPLVLS 159 + + F + +T + R+ + + ML A S E Q++++ L++ Sbjct: 127 GIEILFGKADSTYAIFNCRENR---ERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIW 183 Query: 160 LLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFA 219 L+ + +++ S + I ++ +NY + ++ +++A+ +I +L+ F Sbjct: 184 LVRC--TTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDTLAEVAHINKYYLAHTFQ 241 Query: 220 QHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + + I Y+ R+ +++ +L S+ ++++ GF YF + FR+ GLTP EY Sbjct: 242 KAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGLTPNEY 301 Query: 280 SARFQ 284 + + Sbjct: 302 RRQVR 306 >UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Thermoanaerobacter RepID=B0K3C5_THEPX Length = 530 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 77/158 (48%), Gaps = 2/158 (1%) Query: 124 QLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLY 183 ++ L EG +HL + QN + + L + ++ G + + + Sbjct: 370 EVGMLTGEEGRVFQFCFSHLQKLMRTQNY-RGITLWATSFLEEISDLFAGAKRNENN-IV 427 Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 + ++ +N+ + + + ++Q + P + S+LF + + EY+ +R+ A+ L Sbjct: 428 ERVVKYINENFEKEIRLKELSQTIYLNPEYFSRLFKKEVGCTYAEYLTRIRIEAAKKYLA 487 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 L+I E+A++ G+ D++YF +VF++ G++P E+ Sbjct: 488 NPSLTISEIARKVGYQDANYFSKVFKKVVGISPSEFRK 525 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 95/241 (39%), Gaps = 19/241 (7%) Query: 53 IVLRGEYGNLLEAKQQRLVEGEMLFIPAR--AANLPVNNKPVMLLSLVFAPTWLGLSFYD 110 +V G + L +G++ IP A P ++ W+G Sbjct: 1 MVQEGRGYLEMGEAHYTLEKGDVFLIPEGVEAWYEADKETP-------WSYRWIGFEGVS 53 Query: 111 SRT------TSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVL-SLLHL 163 +R + P R+++ G + ML + L++N + LV L+ Sbjct: 54 ARECLESAGFTPQKPVRKVRCLDKVGGYIDQMLKCHQLYYENELKRNALLMLVFAELITD 113 Query: 164 CRSVV---NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQ 220 R + P + ++ +NY++ L +A + + ++L+ F + Sbjct: 114 NRKNLAGMGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQE 173 Query: 221 HGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + EY+ +RM KA+ +L+ + ++EVA G+ D F ++F+ + G +P EY Sbjct: 174 NIGCSPREYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYK 233 Query: 281 A 281 Sbjct: 234 E 234 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 113/279 (40%), Gaps = 21/279 (7%) Query: 23 NPQLLGRVWFASQPASLPVG--SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 Q + +++ P D+ + V G N + + +L +G++L + Sbjct: 63 QDQDIAILYYGLPLGQPPKQYVWHNHDYFEIIYVHSGSCFNRFQGETIKLCKGDILLLNP 122 Query: 81 RAAN-LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPAR-------------QIQLP 126 + + ++ + +++ + + S + + + + + Sbjct: 123 TILHQIYALHEEDHIFNIMLSKSLFEGSMWQLLSGNKIINNFFVNYFYQMNKTKDYVHFR 182 Query: 127 SLQRGEGEAMLTAL--THLSRSPLEQNIIQP-LVLSLLHLCRSVVNMPPGNSQPRGDF-L 182 Q E +T+L +L + P +IQ L++ +L R Q + Sbjct: 183 CSQNHLIEETITSLIAEYLGKKPAYYQVIQSYLIILFAYLSRIYSEQHFIEQQDLEKIGI 242 Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 I +++ NY Q +T + FN + + S+L H F E V ++ A+ +L Sbjct: 243 LPDIISFIAQNY-QSVTLTEIQNVFNYSSGYTSRLIKHHTGKTFSEIVHDFKLNHAKELL 301 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +L+I ++A++ GF DS Y +VF+++FG+TP +Y Sbjct: 302 VSTNLNITDIAEKIGFNDSHYLNKVFKKRFGITPTQYRR 340 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 102/257 (39%), Gaps = 16/257 (6%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN--NKPVMLLSLVFA 100 + + L +VL GE+ + +G+++ I + + + N+ S+VF Sbjct: 35 AHWHNEIELILVLSGEFNLKINTDSYTCKDGDIILINSGSLHYFSTKENESSTWNSIVFN 94 Query: 101 PTWLGLSFYDSRTTSLLHPARQ--------IQLPSLQRGEGEAMLTALTHLSRSPLEQNI 152 L + D+ + + + P I SL E + ++ + S Sbjct: 95 MDQLNSNILDNCSVNFITPIINNEFKLPVIIHKDSLINNELKCIILNIIDTYNSKYYGFE 154 Query: 153 IQPLVLSLLHLCR----SVVNMPPGNSQPRGDFL--YHSICNWVQDNYAQPLTRESVAQF 206 ++ L + ++V N+ + + + ++Q+NY + + ++ Sbjct: 155 LEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEEKIEKIKIVLEYIQENYNKEIDINRLSAI 214 Query: 207 FNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCR 266 + +H + F +H I++++ R+ KA ++ LSI E++ GF + YF R Sbjct: 215 CHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKAASLISNTDLSITEISLEVGFTNISYFIR 274 Query: 267 VFRRQFGLTPGEYSARF 283 F+ ++ TP + R Sbjct: 275 SFKEKYNTTPKGFKTRL 291 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 107/273 (39%), Gaps = 21/273 (7%) Query: 29 RVWFAS-QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL-- 85 R + + + + V G ++ G+++ I + Sbjct: 22 RFFHNEVKNGRPDILFHWHPELEVTYVCEGTARYHIDYDFFNSQAGDIILIRPNGMHSIH 81 Query: 86 PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHP--------ARQIQLPSLQRGEGEAML 137 P+ + + + F LGLS D + L P I+ + +A L Sbjct: 82 PIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQNSVNKFVHCIKPHMPGYDDIKACL 141 Query: 138 TALTHLSRSPLEQNIIQPLVLS-------LLHLCRSVVNMPPGNSQPRGDFLYHSICNWV 190 + L++ E + L+ S LL+ R VV ++ + + + + +++ Sbjct: 142 FDIFSLAKE--ESRHFEILLKSKLHEFIYLLYFHRYVVKKNTDDTYRKNEKI-RQLIDYI 198 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 ++Y+ LT + ++QF + H +F QH E+V VR++KA +L I Sbjct: 199 NNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACELLIHSTRPIL 258 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 E+A GF + F R F+R + LTP +Y ++ Sbjct: 259 EIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKY 291 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 20/248 (8%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF---IPARAANLPVNNKPVML-LS 96 VG F LD+V+ G NL A + +VEG + + N P+ K + + Sbjct: 51 VGDSVEKFDNLDLVMTG--PNLPHAWKGEIVEGNHVVTIQFSDKLLNFPILEKRLFSPIK 108 Query: 97 LVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPL 156 + + G+SF ++ T L + +QL +Q T L LS I+ L Sbjct: 109 QLLLDSQKGISFSEN--TMLAMKEKILQLTRMQ-----GFHTVLEFLS-------ILYDL 154 Query: 157 VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSK 216 + H+ S + + +C++++ N+ +P+ VA N++ + S Sbjct: 155 STADRHILVSNLYDTKDTIRTSKSRRIAKVCDYIEKNFEEPIKLGDVAALVNMSESAFSH 214 Query: 217 LFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 F + FI+Y+ +R+A+A +L + ++ E+ CGF + F R+F+++ G TP Sbjct: 215 FFRKKTNCTFIDYINNLRVARACQMLTETSHTVAEICYSCGFNNLSNFIRIFKKKKGNTP 274 Query: 277 GEYSARFQ 284 EY Q Sbjct: 275 SEYRTILQ 282 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 104/268 (38%), Gaps = 10/268 (3%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 P V +P + +L GE+ LE + L + ++ FI Sbjct: 18 PIEYHYVDHTHPQYEMPFHWHIE--YEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKL 75 Query: 84 NLPVNNKPVMLLSLVFAPTWL-GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 + + K +VF L SF + + P + + L + Sbjct: 76 HG-GSPKDCTYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFD 134 Query: 143 LSRSP---LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSIC---NWVQDNYAQ 196 RS E +I+ L+L L ++ + + + +YA+ Sbjct: 135 AIRSEEEGYELSILGSLLLFFAALQKNEYYSKEEEYDLKSQKAIEQLKASLELIVTDYAK 194 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 PLT + +++ ++P + + F ++ I+Y+ + R+ +A + + ++ ++A RC Sbjct: 195 PLTLQELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRC 254 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 GF D YF + F++ G+TP +Y ++ Sbjct: 255 GFNDFSYFIKTFKKYKGITPKKYQMMWK 282 >UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L4_PAESJ Length = 287 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 94/253 (37%), Gaps = 14/253 (5%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLVFA 100 D+ + V G + + G+ IP + P PV ++ FA Sbjct: 32 DHLHDWYEIVFVYSGTGTFFINHSFYEMNPGDAFLIPGNTVHRAFPDEFSPVTSSAIFFA 91 Query: 101 PTWLGLSFY--DSRTTSLLHPARQ-----IQLPSLQRGEGEAMLTALTH--LSRSPLEQN 151 P ++ + AR+ ++ +R ++ + L+R P + Sbjct: 92 PRFIQPMEFGESHSLLRCFEQARKSKSYKLETSPDKREAFSGLIDVMNEEWLNRLPSYRA 151 Query: 152 IIQ-PLVLSLLHLCRSVVNMPPGNSQPRGDFL-YHSICNWVQDNY-AQPLTRESVAQFFN 208 I L L+ L R + + +I +++ + +Q ++ ++ + Sbjct: 152 AIAVRLYDFLIALNRMALTETEHTRSSSAEPSWIRTILDYIDAHIGSQEMSLADLSSKAS 211 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 +T H S++F QH M EY+ ++ A+ L +I V CGF YF + F Sbjct: 212 VTYAHFSRVFKQHTGMNVSEYILIKKIMLAKEKLMLTGDTIASVCLACGFESESYFYKKF 271 Query: 269 RRQFGLTPGEYSA 281 + G+TP EY Sbjct: 272 KLITGMTPVEYRR 284 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 101/266 (37%), Gaps = 15/266 (5%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL--PVN 88 + V D IV G K+ L +GE +FI A + N Sbjct: 29 CYDDDLIKKSVPWHWHDEFEAVIVSEGTALIAAGTKKYTLKQGEGIFINAGILHAAWSKN 88 Query: 89 NKPVMLLSLVFAPTWLGLS----FYDSRTTSLLHPA--RQIQLPSL---QRGEGEAMLTA 139 L S+ F P +G S F+ + LL + I L S + A+ +A Sbjct: 89 CSICHLHSITFHPRLIGGSIDSIFWHNYVQPLLTNPIVKHIHLDSSEAWHKEATHAIESA 148 Query: 140 LTHLSRSPL--EQNIIQPLVLSLLHLCRS--VVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 + P E + L +LHL V++ P R + ++QD+Y Sbjct: 149 WNSCANEPFGYEFQVHSSLSQLILHLSAYHPVISRQPSEKVLRNSNRLKLMLQFIQDHYH 208 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 + +A I+ + + F + I+Y++ R+ KA L + +I ++ + Sbjct: 209 DQINVSMIADTAMISESECLRCFRNIIGIPPIQYLKQFRIQKAVEFLTSTNETITKIGAK 268 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSA 281 CGF D+ YF + FR Q TP EY Sbjct: 269 CGFQDTSYFVKTFREQKKCTPSEYRK 294 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 102/255 (40%), Gaps = 16/255 (6%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFA--- 100 + + +L G+ ++ + + G ++FI + P ++ + Sbjct: 30 HLHNEYEIYYLLEGQRYYFIDRRTYHVTGGSLVFIDRNQIHQTSQAGPGSHERILISLDQ 89 Query: 101 ---PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL--SRSPLEQNIIQP 155 +L + S + + L + E +L + P ++I Sbjct: 90 NPFSDFLAFTGEMSLEGFFRRNSGILNLDKEGQNLAEYLLDGAAKELHEKKPGFRHITMS 149 Query: 156 LVLSLLHLCRSVVNMP-------PGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFN 208 + L L + ++ P P ++QP+ + +++ D+Y + L+ E +A F Sbjct: 150 KLSQLFILAQRHMSGPSSLSADLPLSTQPKHRK-VDEVASYIIDHYDKALSLEIIAAHFY 208 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 + +LS++F + EY+ +R+ +AR +L +SI EV++ G+ YF RVF Sbjct: 209 VNKCYLSRIFKEASGFTVNEYINMIRIRRARELLSNTSMSITEVSESVGYETITYFERVF 268 Query: 269 RRQFGLTPGEYSARF 283 + +P Y ++ Sbjct: 269 HQYTQTSPSGYRKQY 283 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 102/254 (40%), Gaps = 10/254 (3%) Query: 32 FASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP 91 + +S P F L VL G L+E + + + +++ I + ++ Sbjct: 28 YEEDWSSYP---HTHYFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHTEKSSLE 84 Query: 92 VMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLE-- 149 L +V L D+ L H ++ +L + + + Sbjct: 85 DPLEYIVLGVDGLNFVIDDANEYLLFHSD---EMKDRLDFYFRTILEETENSQKDYEKVC 141 Query: 150 QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 QN++ LV+ L S V + P + + ++ ++ + +T + +A+ I Sbjct: 142 QNLLNILVVHLSRYASSSVEIFPFHKMESRE--CSRAKRYIDSSFRENITLDKLAEIAQI 199 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 + S F + + + Y+ R+ ++ +L +S+ ++AQ+CGF S YF + FR Sbjct: 200 NKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSSYFTQCFR 259 Query: 270 RQFGLTPGEYSARF 283 + G+TP Y +F Sbjct: 260 KSCGMTPTAYRKQF 273 >UniRef50_B0MA57 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MA57_9FIRM Length = 294 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 110/272 (40%), Gaps = 26/272 (9%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLL 95 S+ + + L + +G + + L+ G+ + ++ ++ + Sbjct: 21 TGSMSQDAHMHKYYELVFIEKGSCTHTFCKEDTLLLPGDSFLVRPETSHSFAIHEQTSIY 80 Query: 96 SLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA-----------------MLT 138 + F P L F+ S L AR Q+ +A +L+ Sbjct: 81 NCQFYPEVLDEQFF-SLVKELKADARGTQVLEKTPTSFQADINNQGIVHLDPNERMFLLS 139 Query: 139 ALTHLSRSPLEQNIIQPLV-------LSLLHLCRSVVNMPPGNSQPRGDF-LYHSICNWV 190 L + ++ +Q L+ + +++ RS SQP+ + + ++ Sbjct: 140 ILGGMQKAQEKQESYYELLKRKYLELILIIYRKRSDQQFKNYYSQPKQNQTIIMRTLAYI 199 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 ++N A+P+ +A+ N++ NH KLF + +EY+ +R+ KA LQ +LS+ Sbjct: 200 EENIAEPIDFNELARDENLSTNHFRKLFKDVTGLAPVEYINRLRITKACEHLQHSNLSMS 259 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 E+A G D +YF R+F+ G +P Y R Sbjct: 260 EIAANVGIYDQNYFSRLFKNFMGCSPRHYIRR 291 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 26/243 (10%) Query: 51 LDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYD 110 L I G + K + G ++ + P M LS +G ++ Sbjct: 45 LVIPFSGSACFTFDGKPYVIEPGMVV-------HA----GPGMRLS----KEVIGDREWE 89 Query: 111 SRTTSLLHPARQIQLPSLQRGEGEAML---TALTHLSRSPLEQNII-------QPLVLSL 160 P + L + + HL R L+ I Q VL Sbjct: 90 YAVIHYHIPQHERDEYPLFHKDFSLAHGRSAKVPHLVRQILDIQSIPGAAAKFQTKVL-F 148 Query: 161 LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQ 220 L L + + G L +++ NYA LT + VA F++ S LF + Sbjct: 149 LSLLQEIFTAACGQPGQENSKLIEEAMGYIRLNYADELTVQKVADEFSVERRQFSYLFKR 208 Query: 221 HGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 H M I Y+ R++KA+ +L S+ +VA+ G+ DS YF + F++ G++P EY Sbjct: 209 HTGMSPIHYLIECRISKAKELLGSPGCSVKQVAEWVGYTDSLYFSKAFKKYTGVSPSEYR 268 Query: 281 ARF 283 F Sbjct: 269 EGF 271 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 92/240 (38%), Gaps = 7/240 (2%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGL 106 D + ++ G+ + L G+ + + + + TW+G Sbjct: 41 DHYLIHYIISGKGRYTVNGSVHTLTPGDAFLVYPNTEVIYQADA-----QDPWEYTWVGF 95 Query: 107 SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLC 164 + D+ T + G + L H+ +R +N ++ L Sbjct: 96 TGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYDARGTEFENALEMTGRLYTTLA 155 Query: 165 RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTM 224 V Q + ++ NY+ P+T E +A + ++ +HL + F + Sbjct: 156 LFVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLSRSHLFRSFQSILGV 215 Query: 225 RFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 EY+ R+ +A +L+ LSI +A GF +S YF + F + GL+P EY ++++ Sbjct: 216 SPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKIKGLSPKEYRSKYK 275 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 160 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 107/269 (39%), Gaps = 16/269 (5%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VN 88 ++ +S + + + V+ G + + + L + + +FI A + N Sbjct: 29 FYEENLSSYSIPWHWHEDFEIIWVISGSIKVSVNSTEHILNKNQGIFINAGFLHSIHATN 88 Query: 89 NKPVMLLSLVFAPTWLGL--SFYDSRTTS-----------LLHPARQIQLPSLQRGEGEA 135 + +L S+VF P +G S Y LL P Q L Sbjct: 89 DGEYVLRSIVFHPRLIGSIDSIYWQNYIEPIIQNKNLPYILLDPFINWQDKILAYSISVW 148 Query: 136 MLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 T +N + L+L +L S+ P R ++ ++Q +++ Sbjct: 149 NRLYNTENGFEIYVRNELSQLILIVLT-NHSICEAKPSIRNLRNADRIKTMLQYIQMHFS 207 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 + +T ++A+ I+ + + + F + +Y++ R+ KA +L ++ ++A + Sbjct: 208 ETITISTLARVALISESEVLRCFHRTIHSTPNQYLKQYRIQKACQMLIDTDMTSIDIAFQ 267 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 CGF S YF + FR Q G TP EY R Q Sbjct: 268 CGFQSSSYFTKTFREQIGCTPLEYRKRDQ 296 >UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N277_9BACT Length = 315 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 9/254 (3%) Query: 40 PVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVF 99 +F L +VLRG +L ++++ L G + + ++ ++P+ L++ +F Sbjct: 46 HTQYHKHNFYELAVVLRGAGTHLTDSQKLPLRPGSVFLLHPGESHAYEYSEPLTLMNFMF 105 Query: 100 APTWL--------GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQN 151 L GL+ Y R++ + S E + +L A+ SR Sbjct: 106 DSQILRPYRKSLSGLAGY-PLLFCPAEERRELCVDSATLAELDILLHAMAMESRQRSAGA 164 Query: 152 IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITP 211 + + L L + + R + +++ NY + ++ +A+ N++ Sbjct: 165 ELLLISHLLNLLVLVLRKSCSYVERERFNSDIGIAVAFMRRNYQEEISLPKLARLANLSE 224 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 + + F + ++++ +R+ KA L + ++I E+A GF DS YF R FRRQ Sbjct: 225 SSFFRKFREEMKTSPMQWLLNLRIRKAMEFLIRSDMNIGEIAAATGFSDSLYFSRQFRRQ 284 Query: 272 FGLTPGEYSARFQG 285 G++P Y ++ G Sbjct: 285 VGVSPKNYRSQAHG 298 >UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QN46_9SPHI Length = 288 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 109/275 (39%), Gaps = 25/275 (9%) Query: 32 FASQPASLPVGSLCIDF-PR--LDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL--- 85 F + P + F P L ++ +GE ++ K R ++L + A ++ Sbjct: 16 FRIDQDNAPYFYGQLHFHPEIQLTLIQQGEGTLIVGDKIDRFNPYDVLLLGANLPHVLRS 75 Query: 86 ------PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA 139 P + + +S++F P L + + T L Q ++ G A Sbjct: 76 DTDYYQPESTRRATSVSVLFKPEHLEKTMLNLPETRHLTTLLQEAQHGVRLRCGTE--NA 133 Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGN----------SQPRGDFLYHSICNW 189 LT L E+ + L L LL + ++ P +P + ++ Sbjct: 134 LTQLLEDIPEKRPFEQL-LGLLQVLDNLAANPEREVLSATAYAQPQRPDDQRRLEQVFSY 192 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 + YA P++ + VA N+TP + F QH F + + VR+ A L++ +I Sbjct: 193 ILQRYASPISLDDVANVANLTPGAFCRFFRQHTRKTFSQLLNEVRIEHACRYLRESQENI 252 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ++A CG+ + F R F+ G+ PGEY ++ Sbjct: 253 SQIALNCGYTNLSNFNRQFKEIVGMPPGEYIRSYR 287 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 90/277 (32%), Gaps = 17/277 (6%) Query: 24 PQLLGRVWFASQPASLPVGS---LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 P+ +F + P D L V+ G+ + Q G++ IP Sbjct: 11 PEAENHSFFFIDQRTEPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEAGDVALIPP 70 Query: 81 RAANLPVNNKP-------VMLLSLVFAPTWLGLSF-----YDSRTTSLLHPARQIQLPSL 128 + V L + F + + S +R ++ P ++ Sbjct: 71 SMLHRWEYAADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDALKFGPE 130 Query: 129 QRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICN 188 L+ + + + + L+ + + P + IC Sbjct: 131 SVRVIRKTLSEMNGMDELGRLSAMFR-LLPVIFTSSDHIFAGKPMRIEKNVR-RMQQICA 188 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +V +Y + + +A + + F + M F ++V R+ A +L+ Sbjct: 189 YVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHSQKG 248 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 + E+ GF D +F RVF G+ P +Y +F+ Sbjct: 249 VSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQFKA 285 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 108/273 (39%), Gaps = 16/273 (5%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 P V + ++P + ++ GE+ L + +L G++ FI A Sbjct: 18 PIAFYHVSPSHPRYNMPYHWHTE--YEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGIL 75 Query: 84 NLPVNNKPVMLLSLVFAPTWL--GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT 141 + + +VF L S + ++H ++ I SL + + T Sbjct: 76 HGGTP-IDCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVIN--SLLPTDNLELQTVCN 132 Query: 142 HLSRSPLEQNIIQPLVL--SLLHLC----RSVVNMPPGNSQPRGDFLYHS---ICNWVQD 192 +L S ++ + LV SL HL + P + + + + + ++ Sbjct: 133 YLFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQ 192 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 Y PLT E +++ +TP + + F I+Y+ + R+ + L + SI E+ Sbjct: 193 QYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEI 252 Query: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 A CGF D YF + F++ G+TP +Y + Sbjct: 253 ALNCGFNDISYFIKTFKKYKGVTPKQYLKDYHA 285 >UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLM9_9FIRM Length = 516 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 72/147 (48%) Query: 136 MLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 + L S + + + L+ + + + + + + I ++Q++YA Sbjct: 359 LDDILNEQIFSVNDCSSSEELLEKVKVILQELTREDQRTGETGSSRIVQEIKRYIQEHYA 418 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 + + ++A ++P +LS LF + + Y+ +VRM A+ L ++ L I+EVA+ Sbjct: 419 ENINLNALADQVYLSPKYLSDLFKRETGENYTSYLLYVRMEHAKKYLMQFDLKIYEVAEL 478 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSAR 282 G+ F RVF+++ G+TPGEY + Sbjct: 479 TGYASPKQFIRVFKKEVGVTPGEYRNQ 505 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 96/251 (38%), Gaps = 14/251 (5%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLVFAP 101 + L V +G + G++ + + + +++F P Sbjct: 37 HWHESMELVFVKQGMGLVQVGVVTYPAYRGDIFIFAPGTLHALRQAEGQRMEYENIIFEP 96 Query: 102 TWLGLSFYDSRTTSLLHPARQIQLPSLQRG--------EGEAMLTALTHLSRS--PLEQN 151 LG + D L P + +L R + A L L +R+ P + Sbjct: 97 ELLGGAE-DLCAEKYLLPLQSGRLSLPVRLTPNDLCYLQAAACLRELEDANRAKRPGYEL 155 Query: 152 IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITP 211 +++ +L L L + +++ ++ W+ +YA+PL A + + Sbjct: 156 LVKGALLRFLALLIAQ-GRQCLSTETADTQRLKTVLQWLSAHYAEPLRVADAAGVCSFSA 214 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 +H + F Q FI ++ R+ A L+ ++ +A RCGF + YF R F+ Sbjct: 215 SHFMRWFRQMTGQSFIAFLNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNRAFKAH 274 Query: 272 FGLTPGEYSAR 282 FG+TP +Y + Sbjct: 275 FGMTPRDYRKK 285 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 96/251 (38%), Gaps = 14/251 (5%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL--PVNNKPVMLLSLVFAP 101 + V +G ++ + + +GE +FI + + +N + ++V P Sbjct: 37 HWHEGFEYLTVTKGRAVFKVDDLEIEVSKGEGIFINSNVLHSAHSINEEECSFFAVVCHP 96 Query: 102 TWLGLSFYDSRTTSLLHPA--RQIQLPSLQRGEGE---AMLTALTHLSRSPLEQNIIQPL 156 +L D ++P + P + + + +L LT + E+ L Sbjct: 97 AFLSSYINDCINQRFINPILNHSLYFPIHLKKDVDWQRNILLLLTQVYDINKEKEFGYEL 156 Query: 157 VL-------SLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 +L + + ++ G++ + N++ +NY + A ++ Sbjct: 157 LLKSKIYEIWFECIKNAKKSINKGSNTSYKTERMKVVLNYIHENYFNKIVVSEFASLVHM 216 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 + H + F + YV R+ ++ + L + + I E+A GF D YF +VFR Sbjct: 217 SDEHFCRFFKAMTHFTLVSYVNRYRIERSCVFLSQTNKKISEIAGDVGFGDISYFNKVFR 276 Query: 270 RQFGLTPGEYS 280 + G TP +Y Sbjct: 277 KIMGCTPVDYR 287 >UniRef50_B1R1I5 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1I5_CLOBU Length = 284 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 105/281 (37%), Gaps = 22/281 (7%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 S NP++L ++ + + C DF V+ G ++ K + E +L Sbjct: 6 ISIEKFNPEVLYSIYCTTSD-TFEGNYHCHDFIEFSYVVSGNVNYKIDDKFYLIKEKTLL 64 Query: 77 FIPARAAN--LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ-LPSLQRGEG 133 A + L L +G L H + +P G Sbjct: 65 PFNAGVYHHEYFTKGINSNLKELH-----VGFRNLKIDGLPLNHILKNSSTVPMQFNQYG 119 Query: 134 EAMLT-----ALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRG--------D 180 E H ++ +++ LV+ L+ L N + + Sbjct: 120 EDFHKCCLEIIEEHECSEIGKELVLKSLVMKLIALFLKETNYVKNTKKIKQYSLPFYDKS 179 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 + I ++ + NY ++ +++ I+ ++SK F + I Y+ +R+ KA+ Sbjct: 180 NIVEIIIDYFEKNYMNNISLNDISKNMYISSVYISKTFKEKTGESPINYLINLRLQKAKD 239 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +L + + + +AQ G+ D+ YF ++F++ + +P +Y + Sbjct: 240 LLLETEMPVKIIAQSVGYSDAYYFSKLFKKYYEYSPNKYRS 280 >UniRef50_A4XHB8 Two component transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XHB8_CALS8 Length = 546 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 6/189 (3%) Query: 100 APTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLS 159 ++ +Y + A+ + S E + L + LS L+ I L Sbjct: 356 DKQYIFNLYYLMLIEINMIKAQVLSSSSQYEQEDK--LQDIEFLS-EILKCKSISELNGV 412 Query: 160 LLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA-QPLTRESVAQFFNITPNHLSKLF 218 L + + ++Q + L + +++ NY+ ++ +++ F ++P++LS+LF Sbjct: 413 LKMSIQKTIEEVQKHNQSKMGSLIKKVIEYIKANYSYNEISLSEISEKFFVSPSYLSRLF 472 Query: 219 AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGE 278 + +++ R+ KA+ +L L +EVA + G PD YF R+F+R G +P E Sbjct: 473 KKETGKNLSDFINEYRIEKAKELLATTDLKTYEVADKVGIPDPHYFSRIFKRYTGYSPSE 532 Query: 279 YSA--RFQG 285 Y +F+ Sbjct: 533 YKEIVKFKN 541 >UniRef50_C7GGB1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGB1_9FIRM Length = 551 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 1/152 (0%) Query: 132 EGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQ 191 E +L + + + +L +V+ + + R D L +++ Sbjct: 389 TSENLLEQYKDAQKMEIFLGTAGQAREYIKNLFGAVIELREQGMERRYDNLIQHAKAYIE 448 Query: 192 DNY-AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 DNY + ++ VA N++ +H S +F Q + F+EY+ VRM KA+ +L+ Sbjct: 449 DNYNHEDISLNMVASEVNLSSSHFSTVFGQETGVTFVEYLTKVRMDKAKQLLRTTGTKTT 508 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 E+A GF D+ YF +F++ G TP EY R Sbjct: 509 EIAFEVGFRDAHYFSNLFKKTQGCTPREYRNR 540 >UniRef50_C6IYL2 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYL2_9BACL Length = 530 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 65/127 (51%) Query: 159 SLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLF 218 L L + ++ G+S + ++ ++ NY L +A+ ++ ++LS LF Sbjct: 403 FLYGLAEPLFSLKKGDSTREEPSIVEAMKEMIELNYMNDLNLSQIAEQYHYNLSYLSDLF 462 Query: 219 AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGE 278 F++Y+ VRM KA +L + LS+ ++A+ GF ++ YF F++ FG++P E Sbjct: 463 KTKTGKSFLQYLTDVRMNKAVQLLDETPLSLSDIAELTGFSNASYFSTKFKKVFGISPSE 522 Query: 279 YSARFQG 285 Y + + Sbjct: 523 YRQKDKN 529 >UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and AraC-type DNA-binding domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK9_ANOFW Length = 428 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 64/115 (55%) Query: 167 VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRF 226 + + + G + + ++Q+NY +T E VA++ ++TP + SKLF + F Sbjct: 308 LTDEVEQTTIKTGGSVIEQVEMFLQENYCYDVTLEEVAKYVHLTPYYFSKLFKKETGQTF 367 Query: 227 IEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 I+YV +R+ KA+ +++ L++ E R G+ D +YF RVF++ +TP EY Sbjct: 368 IDYVTHLRIEKAKQLMRDEGLTVKEACYRVGYKDPNYFSRVFKKVTNMTPTEYRQ 422 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 109/284 (38%), Gaps = 15/284 (5%) Query: 8 ADQQFFA-DLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLE-- 64 ++Q+F+ S + L P G+ P + F +L G L Sbjct: 2 SEQEFYVFHNISSVDLYPIQFGKEKCDPWHHYGPTLTHNYLF---HYILSGRGSFLENER 58 Query: 65 AKQQRLVEGEMLFIPAR--AANLPVNNKPVMLLSLVFA--PTWLGLSFYDSRTTSLLHPA 120 + +L G+ +P + + P + F + +L+ Sbjct: 59 HEAIQLGPGQGFLMPPNTVCSYTADQDDPWTYCWIEFNGLKAANFMRQAGLNANNLIFTP 118 Query: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 + + S + E ++ + S E +I L L + HL R + P Sbjct: 119 HKPMIISSIKDTLETIIR-----NHSQHESFLIAQLYLLVDHLIRFSKHSPQQRPNEIHS 173 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 F +++QD+Y + + +A ++ N+ ++LF Q M +++ R+ ++ Sbjct: 174 FYIREAIHYIQDHYMDNPSVDQLADICHLNRNYFTRLFKQELHMTPSQFILTYRINQSCE 233 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +L + SI ++A + G+ + F F+R G+TP E+ R++ Sbjct: 234 LLASTNRSIRDIADQIGYSNQFNFSSAFKRVKGMTPMEWRRRYR 277 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 98/260 (37%), Gaps = 9/260 (3%) Query: 26 LLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL 85 L + F L V+ GE L + + G+++ IP + Sbjct: 19 RLLSISLVKDDKDWNSVFHTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYLEHT 78 Query: 86 PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSR 145 + K L V + + +T Q + + + + R Sbjct: 79 EQSVKGKSLEYYVIGIDKISFLAENGQTG------IQAFCNFRDQSSVSDIFAQMLYEMR 132 Query: 146 SPLEQNII---QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 + + I L + +L + RS +P + R I ++ NY + +T ++ Sbjct: 133 NDDYGSEIICQNLLEILILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERITLDT 192 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 + ++ +++ FA++ + I+Y+ R+ A +L+ S+ ++A GF Sbjct: 193 LTSLTHMNKYYMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQS 252 Query: 263 YFCRVFRRQFGLTPGEYSAR 282 YF + FR+ +G+TP +Y + Sbjct: 253 YFTQSFRKYYGMTPLQYRQQ 272 >UniRef50_UPI000178AA9D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA9D Length = 277 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 102/253 (40%), Gaps = 13/253 (5%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VNNKPVM 93 + ++ + L + GE ++ ++ R G+++ +PA + + VN+ Sbjct: 29 SQNWRFFNMRPSYNALYFIREGEGWIKIDDQEYRPSPGQIVLMPAGSLHSISVVNDNTYR 88 Query: 94 LLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNII 153 F L+ + L+H + +P E + L RS + Sbjct: 89 KFWCHFTAKVDTLNLFQ-----LIHLPHVLDVP--DESYMEQLFKELIDAYRSSAWTAPL 141 Query: 154 QP---LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNIT 210 Q L+ + H V + S +++ +++++ ++ E +A + Sbjct: 142 QRNEILMKLVRHYLDIVPDRQISLSMLPDMQKLNTVFQYIEEHINDNVSVEQLAGLIHYN 201 Query: 211 PNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRR 270 PN+ + F M ++Y+ VR+ K + +L L++ E+ ++ G Y CRVF++ Sbjct: 202 PNYFIRFFKSKMKMTPVQYIIKVRIEKTKGLLMTTDLTLEEIGRQVGME-VHYLCRVFKQ 260 Query: 271 QFGLTPGEYSARF 283 ++PGE+ + Sbjct: 261 FTNMSPGEFRNQI 273 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 102/278 (36%), Gaps = 14/278 (5%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 F VL + R++F ++ P + ++ G + L +G++ Sbjct: 4 SFEKTVLESEFPFRLFFNDGYSNTPHHWHED--IEIIYLVEGTLKACINRDTYDLTQGDI 61 Query: 76 LFIPARAANLPVNNKPVMLLSLV-FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGE 134 L I + K +++ F + ++ T ++ P + E Sbjct: 62 LIIGGGEIHCFFKEKKFSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIH 121 Query: 135 AMLTALTHL---SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL--------Y 183 A++ + S E+ + L L ++ P S D Sbjct: 122 ALMERHINEIINEYSKAEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKM 181 Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 S+ +V NY + + + +++ + + +K F ++ + F++Y+ R+ KA + Sbjct: 182 DSVFQYVDTNYQERIDLDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRII 241 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + +I E+A CGF F R+F+ G TP +Y Sbjct: 242 EEDETIAEIAYNCGFNSIKTFNRLFKNIVGCTPMKYRR 279 >UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J070_9BACL Length = 523 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 63/143 (44%) Query: 142 HLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRE 201 L L LH ++ + + +V + + ++ E Sbjct: 379 ELIEDLSACEDTASLRERALHRLGGWIDGLRERKERSRSHVLQRALLFVNQRFKEEISME 438 Query: 202 SVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDS 261 A++ N++P + SKLF F +Y+ +R+ +A+ ++ LS+ E+ G+ D Sbjct: 439 QTAEYVNLSPYYFSKLFKLQTGENFSDYLTRLRIEEAKRLIAGRSLSLKEICYEVGYKDP 498 Query: 262 DYFCRVFRRQFGLTPGEYSARFQ 284 +YF RVF++ G+TP EY + + Sbjct: 499 NYFSRVFKKSVGITPSEYRQQIE 521 >UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM6_9CLOT Length = 383 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 109/303 (35%), Gaps = 35/303 (11%) Query: 8 ADQQFFAD-----LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNL 62 +++Q F + LF + S G ++ + V RGE Sbjct: 75 SEKQLFDEGEDIVLFVDFRHELSEYHNITLESIRTHFETGLHTHEYFVITYVFRGECYCY 134 Query: 63 LEAKQQRLVEGEMLFIPARAAN-LPVNNKPVMLLSLVFAPT------------------W 103 ++ +G++ F+ + ++ L + ++ + T + Sbjct: 135 FGGEEFHFKQGDIWFLNTQVSHKLLLPGDDCVVFHICLRQTSFCSVLLDKIKNNEQFVHF 194 Query: 104 LGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT-HLSRSPLEQNIIQPLVLSLLH 162 S +D L +L Q + L + + Q +I L LL Sbjct: 195 FVNSIFDEDNNPCLMQFHIRELSVAQY----YLFKMLEEYYDQKMHSQEVIAYLFCCLLI 250 Query: 163 LCR-----SVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKL 217 V + + + + ++ ++ Q +T + A F+ P +LS+ Sbjct: 251 QLERNCEAEAVEQEAHRNGRQKNLDISEVIAYLMEH-QQTVTLQQAASHFHYVPAYLSRF 309 Query: 218 FAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPG 277 +H F+E++ +R+ +A +L+ L I +++ G+ D F R F+RQ+ +TP Sbjct: 310 IQRHTGKTFLEFLNGIRLERAAEMLRNTTLPIRQISHMVGYSDRSSFDRSFKRQYHMTPR 369 Query: 278 EYS 280 +Y Sbjct: 370 KYR 372 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 108/270 (40%), Gaps = 12/270 (4%) Query: 23 NPQLLGRVWFASQPASLPVGSL----CIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI 78 ++ + +A + + P + D + +V G+ + + G++L Sbjct: 7 GEEIQSHLLYAGKVSDTPNWNFPSHKHDDLHEIIVVCGGQGMFTIGGQSYSASGGDILVY 66 Query: 79 PARAANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 + + + P++ F+ S + R ++ E EA+ Sbjct: 67 NKGVLHEEQSSIDNPLITYYCGFSLPKASPSEDWVIPPDVEPVIRSSRVF----PEIEAL 122 Query: 137 LTALTHLS--RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNY 194 + + S + + I + L+ S++ L R V Q L I +++ N+ Sbjct: 123 MKMIVDESSIKEDGYEGISRYLINSVILLLRRAVRNQQHIKQESNTGLAEQIKDYIDRNF 182 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 Q ++ + + + F++ P ++S +F H + I Y R+ +A +L + + EVA+ Sbjct: 183 TQNISLKDLGRQFHVNPYYISHVFKDHYRISPINYAIHRRIGEATRLLVTTEMKVWEVAK 242 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 G+ + +YF +FRR GL+P + Q Sbjct: 243 LLGYDNPNYFSIIFRRVTGLSPNRFRESNQ 272 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 105/247 (42%), Gaps = 12/247 (4%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGE-MLFIPARAANLP-VNNKPVMLLSLVFA 100 S D+ L + GE ++++ + + GE ++F P + N P L + F+ Sbjct: 23 SHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRLLVYFS 82 Query: 101 PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSP--LEQNIIQPLV- 157 + L + ++ ML L P ++ I L+ Sbjct: 83 KEEVDSVQL---LKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYIHTLLN 139 Query: 158 LSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKL 217 ++LL + R++ + R + +++ NY + ++ + +AQ ++P +L + Sbjct: 140 MALLTIARNIQTPVKPEKRNR----ITDVISYIHQNYQEDISIDQLAQMSYVSPYYLCRE 195 Query: 218 FAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPG 277 F ++ I+YV R+ A+ + + + +I E+++ GF + +F RVF+ G+TP Sbjct: 196 FKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMTPS 255 Query: 278 EYSARFQ 284 + ++ Sbjct: 256 NFRKMYK 262 >UniRef50_Q2RJ70 Transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJ70_MOOTA Length = 440 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 77/139 (55%), Gaps = 1/139 (0%) Query: 145 RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA-QPLTRESV 203 R E + ++ VL LL + + + + + G+ + + ++Q NY+ + L+ + + Sbjct: 296 REIDEADTVEKAVLWLLAVGNAFIELIAERNSSEGEGIIDRVVEYIQKNYSSESLSVKEI 355 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 A+ ++P +L +LF + E++ VR+ +A+++L++ +I VA + GF + Y Sbjct: 356 ARASYLSPAYLGQLFKKKMGYSLTEHINKVRIEQAKLLLRQTEQTIESVAIQTGFKERSY 415 Query: 264 FCRVFRRQFGLTPGEYSAR 282 FC+VF++ GL+P EY + Sbjct: 416 FCKVFKKITGLSPNEYRRK 434 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 109/273 (39%), Gaps = 13/273 (4%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 FS + + F + + F + + G LE + E +++ Sbjct: 13 FSDFNFELLYITKSKFEND---WHSTAHIHPFMEIFFITEGNGSFQLEDSTVNVKEYDLI 69 Query: 77 FIPARAANLPVNNKPVM-LLSLVFAPTWLGLSFYDSRTTSL-LHPARQIQLPSLQRGEGE 134 I + +N L +V ++F++ ++ + +L++ Sbjct: 70 IINPNCLHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHVINLKKNSS- 128 Query: 135 AMLTALTHLSRSPLEQNIIQP------LVLSLLHLCRSVVNMP-PGNSQPRGDFLYHSIC 187 +L L + +N L L +L++ R++ +M N + + I Sbjct: 129 IILNQLNLIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKNLNLECAKIK 188 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 N++ +Y++ +T E+++ + L F + M I Y+ R+ +A+ +L+ + Sbjct: 189 NYLDSHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEAKSLLETTNY 248 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 SI ++ GF +S YF ++F++Q L+P +Y Sbjct: 249 SIKDIGSIVGFSNSSYFSQMFKKQTNLSPKQYK 281 >UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35507 Length = 307 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 108/271 (39%), Gaps = 23/271 (8%) Query: 29 RVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN---L 85 R+W Q + + + + + Y L +L G +LFIP + Sbjct: 33 RIWHNIQNEGYAL--HQHNAIEILVPIENSYTVLANNHTYQLEPGNILFIPGLTLHEIMK 90 Query: 86 PVNNKPVMLLSLV-----------FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGE 134 P + + + + P L F RTT ++ +L + Sbjct: 91 PDWGERFIFMFNMDPLTSFHDYSSLEPVLLDPCFLTKRTTPGIYEHIYSRLMEISTLYFS 150 Query: 135 AMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL--YHSICNWVQD 192 + +T + + N+I L ++ ++ D+ ++S+ +++ D Sbjct: 151 SSITFREY----SIYANLIDILTTIGREYYDALFAGTENTAEKSYDYYQKFNSLLSYIND 206 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 ++A+PLT E +A + + H ++LF QH F +Y+ R+ A+ +L SI + Sbjct: 207 HFAEPLTLEKMADYTGFSKYHFTRLFKQHTNSTFYDYLSRKRIQAAQTLL-TTDASITSI 265 Query: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 A + GF +S F R F++ +P EY +F Sbjct: 266 AFQTGFNNSTSFTRCFKKYTNYSPSEYRTKF 296 >UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSF8_CLOPH Length = 292 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 104/269 (38%), Gaps = 17/269 (6%) Query: 30 VWFASQPASLPVGSLC--IDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--- 84 V+FAS+ + DF L +L G ++ + G+M+ + Sbjct: 17 VFFASKMRVTKRTAYHAHQDFTELTYILSGTSKYRIDDIYYDVKAGDMIVCNPGVFHQNM 76 Query: 85 LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLS 144 L +P++ F T L + + L S + E + + + Sbjct: 77 LLDGEEPLVEFCTGFTD--FQFKNMPENTIQLSNQGHIVHLSSEAKRETSRLCYDMLAEN 134 Query: 145 RSPLEQNII---QPLVLSLLHLCRSVVNMPPGNSQ------PRGDFLYHSICNWVQDNYA 195 + L+ L+ L R V+ P + + I N++ +NY Sbjct: 135 EAGQVGKYFMLKAQLIQMLMLLMREVIEAPKVTQKGCNFETYSKSYAVKRIINYLMENYE 194 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH-LSIHEVAQ 254 ++ + +A ++P ++SK+F + I Y+ +R+ KA+ IL + SI +A Sbjct: 195 HKISLDQIAHNMYLSPVYISKIFKEETGESPINYLIKIRLEKAKEILSEREGGSIKNIAN 254 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 G+ D +F ++F++ FG++P Y Sbjct: 255 EIGYDDVYHFSKLFKKYFGISPQNYRKSL 283 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 14/260 (5%) Query: 37 ASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLS 96 C LD G + + G+ + I + + N LL Sbjct: 22 QDEKFSWHCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVIIHTMEDHTLIRNSDCKLLG 81 Query: 97 LVFAPTWLGLSFYDSRTTSLLHP--------ARQIQLP--SLQRGEGEAMLTALTHLSRS 146 + + L +F + L P R+I++P SL +L + + + Sbjct: 82 VQMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRRIRVPKGSLLESILSEIL--VEYQKKQ 139 Query: 147 PLEQNIIQPLVLSLLH-LCRS-VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 P + I+ +L L L R+ V+ + N + + ++++ + L+ + A Sbjct: 140 PGYEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDYMEQHIETELSVAAAA 199 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 + ++ H +LF + F+EY ++R+ +A +L +I +A GF YF Sbjct: 200 KIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTITNIAFETGFGSVAYF 259 Query: 265 CRVFRRQFGLTPGEYSARFQ 284 RVF+++ G P Y + + Sbjct: 260 NRVFKKETGQAPANYRKKMR 279 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 94/256 (36%), Gaps = 16/256 (6%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN---KPVMLLSLVF 99 L V G + + +G+++ I + + + + Sbjct: 37 WHYHPEIELVYVNGGNGKRQIGSHVSYYTQGDLILIGSNLPHCGFTDACTGNTSESVVQM 96 Query: 100 APTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLS 159 +LG F+ + RQ+ + LE +L+ Sbjct: 97 KTDFLGSDFFSI---PEMRNIRQLFEKAKGGIAFTGSAKKKIGEKIEILEYKSDFQRLLA 153 Query: 160 LLHLCRSV----------VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 +L++ + +Q + + +SI N+V++NY +P++ E +A ++ Sbjct: 154 ILNILNELGSTSEYQILNAEHLSVETQSKENERINSIFNFVKENYREPISLEEMADLTHM 213 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 T + F + F+++V RM A +L + +SI E+ GF + +F + F+ Sbjct: 214 TVPSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEICFESGFNNFSHFNKSFK 273 Query: 270 RQFGLTPGEYSARFQG 285 G++P EY + + Sbjct: 274 AFTGMSPSEYRNQLKS 289 >UniRef50_C6CZ56 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ56_PAESJ Length = 519 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 1/170 (0%) Query: 116 LLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQ-NIIQPLVLSLLHLCRSVVNMPPGN 174 ++ ++ LQR E L + L Q I ++ L + + Sbjct: 349 IIRVTSKLHADLLQRNENLYELLKWDAQKAAVLFQFETIDDILSWLRRRFFELSELLYVK 408 Query: 175 SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 Q + L+ +I +V + Q +T + VA F+ TPN+L LF + F +++ R Sbjct: 409 RQKQKRKLFDNIMAFVDERLEQKITLKEVAAHFDFTPNYLGTLFKEETGTLFSDWLNERR 468 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 M + R +L L ++E+A+R G+ + YF R F++ G+TPGEY + + Sbjct: 469 MDRVRELLADPCLKVYEIAERVGYKNIIYFNRQFKQFTGMTPGEYRKKHK 518 >UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2 Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM Length = 304 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 100/247 (40%), Gaps = 12/247 (4%) Query: 46 IDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV--NNKPVMLLSLVFA--- 100 D L L GE +++ ++ R+ G++L IP ++ KP + + F Sbjct: 56 HDDNLLIYCLDGEGEAVIDGQKTRIRSGDILLIPKGVSHTYQARKRKPWTIYWVHFHGHH 115 Query: 101 --PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVL 158 L +S + P I + S + EA+L A L Sbjct: 116 AEDFAQHLQQRESNQRRYVMP---IGIHSRLASDFEALLEARESTYNLNAYICAANQLRQ 172 Query: 159 SLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLF 218 L H+ ++ Q RG + + +Q + + L +++A+ +++ H K + Sbjct: 173 ILSHIA--LLQPLAKQKQSRGGLDIERVHSLMQTHIHEQLDLDTLAESISLSKYHFVKKY 230 Query: 219 AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGE 278 + I + +++ +A +L + I+EVA G+ D+ YF R+F++ G++P + Sbjct: 231 KEVTGTTPINHFIQLKIERACHLLDTTNNGINEVAFAVGYEDAYYFSRIFKKLMGVSPSQ 290 Query: 279 YSARFQG 285 Y G Sbjct: 291 YRKMRTG 297 >UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY53_9BACL Length = 545 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 61/131 (46%) Query: 155 PLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHL 214 L L + + L I +++ +Y + ++ VA F++ P++L Sbjct: 407 ELRRLLAGWADAAEEYGADRRETDSSQLIWHIVDYLDAHYFEDISLIDVATRFHLDPSYL 466 Query: 215 SKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGL 274 SKLF + FIEYV R+ KA +L+ I E+++ G+ + YF +VF++ G Sbjct: 467 SKLFKSVTSENFIEYVTRKRIEKACELLRSSERKISEISELIGYENQRYFSQVFKKSTGQ 526 Query: 275 TPGEYSARFQG 285 TP EY Q Sbjct: 527 TPSEYREAQQS 537 >UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3X5_9BACT Length = 286 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 12/233 (5%) Query: 53 IVLRGEYGNLLEAKQQRLVEGE--MLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYD 110 L G + + G +L +P + P +L +S Y Sbjct: 58 YTLSGMGRLRFGENEYPIPPGSAVLLVVPENHCYYLPEDSPYW--------RFLFVSVYG 109 Query: 111 SRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLL--HLCRSVV 168 S L+ R+ LQ G ++ + L + E+ + S S+ Sbjct: 110 SELVRLVTDFRRSHGFLLQHGTDSPVVASAWELLKKCREKKLDNRYRASAAAYDFVMSLF 169 Query: 169 NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIE 228 + P G D + + N ++PL+ +A + H S+ F Q E Sbjct: 170 SEPAGRGTHAQDDFLKRVHAYALANLSRPLSVGDLADAAGCSRWHFSRRFQQLEGKSPHE 229 Query: 229 YVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +V ++M A +LQ + S+ EVA+ CGF D+ YFC+VFR +G++P + + Sbjct: 230 FVTDLKMRLAVRLLQTTNGSVKEVAENCGFEDASYFCKVFRNHYGVSPAGFRS 282 >UniRef50_UPI0001788F54 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F54 Length = 523 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 1/145 (0%) Query: 138 TALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP 197 A R E + + R G + + + ++QD+YA P Sbjct: 372 NAKYDYFRKIDEARYAGEAIAVVEAFIREA-ERAIGETNTSVNPNMDRLLEYIQDHYADP 430 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 +T VA+ F+ ++LS FA + F EY+ +R+ KA +L L+I E++ G Sbjct: 431 ITLTGVARQFHFNASYLSSYFASYNGEGFSEYLNKIRLEKAMELLLTTELTISEISASVG 490 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSAR 282 + D YF +VF++Q G++P ++ + Sbjct: 491 YSDQSYFTKVFKKQTGISPSQFRRQ 515 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 103/256 (40%), Gaps = 11/256 (4%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL-PVNNKPVML 94 P + + D + V +G ++ ++ +G + ++ + PV Sbjct: 27 PHAFQIPVHWHDEMEIIYVRKGPLTVEIDGQKFTGEDGSVFIASPGVLHMMSAPDTPVDY 86 Query: 95 LSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI-- 152 + +F ++ D+ + P R +L L + +E+N Sbjct: 87 FTFIFPLEFISFQTKDALEDEVFFPLRNHTRGFRPEVADRKLLGKLIPILDELVEENGKM 146 Query: 153 -------IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQ 205 ++ +L ++ L + G+ L I ++QDNY + +++ Sbjct: 147 GTHRQIQVRIRLLQMMDLLVEYSQLEELTRNASGE-LEKEILLYIQDNYHDNIGLAELSE 205 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 F+++ ++S+LF++ M +YV +VR+ AR +L+ LS+ E+A + G+ + YF Sbjct: 206 HFHLSEKYMSRLFSERFHMTLTQYVNYVRLRYARHLLESTDLSVTEIAMKSGYQNVSYFI 265 Query: 266 RVFRRQFGLTPGEYSA 281 R F G +P Y Sbjct: 266 RRFSSAMGESPLRYRN 281 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 93/248 (37%), Gaps = 10/248 (4%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTW 103 + GE + ++ G+++ + + +V Sbjct: 36 HYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSELSQPNHERIVLHYDL 95 Query: 104 LGLSFYDSRTTSLLHPAR-----QIQLPSLQRGEGEAMLTALTHLSRSP---LEQNIIQP 155 T LL I+L +R EA+ +L + + ++ Sbjct: 96 PFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRELQECPPGYQLHVRNM 155 Query: 156 LVLSLLHLCRSVVNMP--PGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 LL R + P I + ++ +PL + +A+ F I+ H Sbjct: 156 ATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHFREPLPLDELAKQFFISKGH 215 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 LS++F + F +Y+ R+ +A ++L++ SI ++++RCGF + +F +VF+ G Sbjct: 216 LSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISERCGFENFSHFGKVFKELSG 275 Query: 274 LTPGEYSA 281 L+P +Y Sbjct: 276 LSPRDYRK 283 >UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax=Enterobacteriaceae RepID=RHAS_SHIF8 Length = 278 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 105/273 (38%), Gaps = 11/273 (4%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 + + P V + DF + IV G ++ + + G + Sbjct: 3 VLHSVDFFPSCNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGGTV 62 Query: 76 LFIPARAANLPVNNKPVMLLSLVF-APTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGE 134 F+ +L + + L ++++ +P + LL Q PS R Sbjct: 63 CFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFL---AGLNQLLPQELDGQYPSHWR-VNH 118 Query: 135 AMLTALTHLSRSPLEQN------IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICN 188 ++L + L +Q + + L + + + + Sbjct: 119 SVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLA 178 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 W++D++A + ++VA F+++ L + Q + Y+ +R+ KAR +L+ S Sbjct: 179 WLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEAS 238 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + ++A RCGF DS++F +FRR+F +P + Sbjct: 239 VTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQ 271 >UniRef50_C6JC58 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC58_9FIRM Length = 547 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 7/184 (3%) Query: 102 TWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLL 161 T+L + Y R T +L+ Q + P L EAM ++ + L++SL Sbjct: 366 TYLDVKQYAGRITGILYRYVQEKCPELTAQAEEAMDNIDYYM-----KCLNAHSLLVSLK 420 Query: 162 HLCRSVVNMPPGNSQPRGDFL--YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFA 219 L S+ S G + I +++ +Y + +T ++A+ +++ ++LS+ F+ Sbjct: 421 ILLDSLWESGEDKSSDAGSIMQQVEQIHKYIERSYHENITLTALAEQYHMDASYLSRTFS 480 Query: 220 QHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 Q I ++ +RM KA +++ + ++ G+ D +YF RVFR++ G +P EY Sbjct: 481 QKYGETIIAFLTRIRMEKAAELMKNQDKKLETISFLVGYDDYNYFSRVFRKKVGCSPREY 540 Query: 280 SARF 283 +F Sbjct: 541 RNKF 544 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 98/249 (39%), Gaps = 11/249 (4%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP--VMLLSLVFA 100 + + +G +E K+ L +GE LFI + + + ++S VF Sbjct: 42 WHWHKEIEIITIYKGTLYIEIENKKFTLKKGESLFINSEEMHFMRMDAREECRIISFVFD 101 Query: 101 PTWLGL---SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI----- 152 + S D + L +++ L + + ++ + L I Sbjct: 102 KVLICGEKGSKIDQKYIIPLINCKELSALELTEEDSQKLIQGYFSYADEILGYEIVIRNV 161 Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 + ++L+++ + ++ S + ++ NY++ ++ +A+ I Sbjct: 162 LSEILLNIVRENQELLE-KSNGSNNTDRERMKYMLTFIHKNYSEDISLGDIAKEAFIGER 220 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 + FA+ IEY++ R+ A +L+K L + E+ + GF YF +VF R Sbjct: 221 EALRCFARTIGTSPIEYLQKYRIYTAAELLRKSELPVTEICLQAGFNSPSYFSKVFCRML 280 Query: 273 GLTPGEYSA 281 G+TP EY Sbjct: 281 GMTPREYRK 289 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 13/254 (5%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAP- 101 L + GE ++ ++ + G+++ IPA + + +V Sbjct: 32 EHIHGQYELYYLFSGERQYFIKDRKYPIAAGDLVLIPANELHKTSDTGVPNHARIVLYYN 91 Query: 102 ----TWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSP---LEQNIIQ 154 G + + L R +L +R E +L L + E I Sbjct: 92 EKYFEQYGKEESELLLSPFLGSRRVFRLAHQERLRFEQLLYGLLQEVQERPPGHEMPIRH 151 Query: 155 PLVLSLLHLCRSVVNMPPGNSQPR-----GDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 + +LL R ++ P S I ++V D++ +PLT +S+++ F++ Sbjct: 152 AVAEALLFAARHAIHNKPDPSDGSVPPSPAAAKAMEIASYVADHFREPLTLDSLSRQFHL 211 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 + ++LS+ F ++ EY+ R+ +A+ L++ I E+A GF F RVF+ Sbjct: 212 STSYLSRTFKKYTGFGLTEYIGITRVKEAQHQLRETDERITEIAAEVGFESLSQFERVFK 271 Query: 270 RQFGLTPGEYSARF 283 L+P +Y ++ Sbjct: 272 THIRLSPRDYRNQY 285 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 66/117 (56%) Query: 166 SVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMR 225 S+++ + + + S N++++NY +T E VA+ +I+P +LSKLF + M Sbjct: 133 SMLDGITAKNSIQDGKVIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMN 192 Query: 226 FIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 F+ YV +M KA+ +L+ L + +A + + +YF +VF++ G+TP EY R Sbjct: 193 FVSYVTEKKMQKAKELLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKR 249 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 107/271 (39%), Gaps = 17/271 (6%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPV 87 V+ P + D L +RG + ++ + G+++F+ + Sbjct: 22 VFHIIPPGKEVLHLHWHDDLELIYFIRGNATFYIGSETVKPEPGDLMFVNKGMIHTGFAD 81 Query: 88 NNKPVMLLSLVFAPTWLGLSF---YDSRTTSLLHPARQIQLPSLQRGEGEAMLTA----- 139 + V +LVF + T+ ++ L + L A Sbjct: 82 DEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRFFPILLPVTDAYNSLIAGIVKQ 141 Query: 140 --LTHLSRSPLEQNIIQPLV-LSLLHLCRSV-VNMPPGNSQPRGDFL---YHSICNWVQD 192 + ++ Q IQ ++ L L+HL R ++ P G++ G L + + +V+ Sbjct: 142 MIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPTGSADTVGAELTDRFKELIAFVER 201 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 +Y + LT + A N++ H + F + F+EYV +R+ A +L I E+ Sbjct: 202 HYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVNLLRINAAEQLLIHSSDPITEI 261 Query: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 A + GF +YF ++FR+ +P + R+ Sbjct: 262 AFKVGFGSVNYFSQMFRQYKRHSPSQCRKRY 292 >UniRef50_UPI0001789951 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789951 Length = 539 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 1/161 (0%) Query: 123 IQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL 182 +Q G ++ L + + L +C + + Sbjct: 371 LQTLMEIGSNGNELIGKEKRLLSDLYSFRSLDEIERWLNEVCEQALRDVAKTRKDIARSQ 430 Query: 183 YHSICNWVQDNY-AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 +++Q +Y + L+ ++V ++ ++ S LF H F+EYV VRM KA+ + Sbjct: 431 MLEAVDFIQRHYEDEELSIKTVCSRIFMSTSYFSALFKSHTGKTFVEYVTEVRMEKAKEL 490 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L+ L +E+A + G+ D YF +F++ G TP EY + Sbjct: 491 LKHSLLKTYEIAAKTGYQDPQYFSVLFKKHTGDTPTEYRNK 531 >UniRef50_C5EPF6 Two component transcriptional regulator n=4 Tax=Clostridiales RepID=C5EPF6_9FIRM Length = 550 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA-QPLTRESVAQFF 207 E + I L SL+ L + + + + + ++++NYA + ++ +VA Sbjct: 411 ESHSITALKESLIRLFEGTMLLRDSQTASKYSQVLEEARAFIRENYAKEEISLNTVAARV 470 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 NI+P++ S +F+Q + F+EY+ VRM +A+ +L ++ E+ G+ DS YF + Sbjct: 471 NISPSYFSSIFSQEMGVTFVEYLTGVRMERAKELLMCSNMKTTEIGYEVGYKDSHYFGYL 530 Query: 268 FRRQFGLTPGEYSA 281 F++ G TP EY A Sbjct: 531 FKKTVGCTPKEYRA 544 >UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETL2_9FIRM Length = 517 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 10/168 (5%) Query: 116 LLHPARQIQLPSLQRGEGEAMLTALTHLSR-SPLEQNIIQPLVLSLLHLCRSVVNMPPGN 174 LL R+I + + + +L+ T +EQ+ L L + P Sbjct: 359 LLDTIREIDGTAYTQMQNADLLSKCTEAVTLREMEQSYRDGLAL---------LCSPRRM 409 Query: 175 SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 + ++ N+++++Y + ++ E VA ITP +LS LF + F ++R R Sbjct: 410 KEDISNYTIKRAINYIREHYKEGISLEEVAGRLGITPEYLSTLFNREMGENFSTFLRKFR 469 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 ++ A+ +L+ + ++E+A+ G+ D YF RVF+ + G++PG+Y + Sbjct: 470 ISHAKRLLKGTDMKVYEIAEEVGYTDPKYFARVFKEELGISPGDYRQQ 517 >UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A5_CLOCE Length = 289 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 108/281 (38%), Gaps = 14/281 (4%) Query: 14 ADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEG 73 A F + N F + ++ + + +G + + E Sbjct: 6 ASNFEHISFNDITFPFNCFYIKNSN--TLPHWHNHFEMVFSQKGSCMVYINGSSFLVSEN 63 Query: 74 EMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQI-QLPSLQRGE 132 +++ IP + + ++V + D + +L P I P L E Sbjct: 64 QLIIIPPGSLHSIFPQGSCSYCAIVAGESLFEGLVADPHISEVLTPFMSIGFYPPLHLSE 123 Query: 133 GEAMLTA---LTHLSRSPLEQ------NIIQPLVLSLLHLCRSVV--NMPPGNSQPRGDF 181 + + L H + +Q I+ ++ L + + + N P Sbjct: 124 KDRVFKKCFLLVHELQRENDQKRNGYGARIKSQMIILFSVLQESLPSEFFKKNKLPDSTR 183 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 L ++++ +Y++ +T ++ + +++ H S+LF F+EY+ R+ KAR I Sbjct: 184 LIKYSLDYLRIHYSERITVNDMSVYCHLSIQHFSRLFKACTGKTFVEYLTLFRLEKARKI 243 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L + I ++ GF +S+YFCR++++ +G P + + Sbjct: 244 LIGTDIPITQIPDLVGFCNSNYFCRLYKKYYGHPPSKDRIK 284 >UniRef50_D1N6X4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6X4_9BACT Length = 295 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 101/255 (39%), Gaps = 19/255 (7%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTW 103 +F L +VL G ++L+ + + G++ I R + N K + + + ++ P Sbjct: 39 HSHEFHELVLVLGGSGLHVLQERSYPIYPGDVFLIKPRQVHGYRNLKKLNIANFLYLPDR 98 Query: 104 LG--------------LSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPL- 148 L D ++ L + + + + + + Sbjct: 99 LAAELDQLKSLLGYYVFFESDPLLAGRARYKNRLTLEAERFNQARELTLRMRREQQRQTP 158 Query: 149 --EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQF 206 E + +L +CR+ S+ I + ++NYA+P+ VA+ Sbjct: 159 GWELMSRLLFLQLMLLICRTFSKSETTGSEETMK--IGRILRYFEENYARPVALAEVARH 216 Query: 207 FNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCR 266 + L++ F + I+Y+ +R+ KA +L+ L + E+A++ GF DS+Y + Sbjct: 217 CGCSVPTLTRFFREAMDDSPIDYLNRLRLDKAAELLRSSRLPVTEIARKTGFCDSNYLTK 276 Query: 267 VFRRQFGLTPGEYSA 281 F R+F L+P Y Sbjct: 277 CFTRRFALSPRAYRQ 291 >UniRef50_C4Z0X2 Two-component system, response regulator YesN n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0X2_EUBE2 Length = 249 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 109/244 (44%), Gaps = 16/244 (6%) Query: 55 LRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVM--LLSLVFAPTW-------LG 105 + G ++ + L EG ++FIPA + + ++ + F+ + LG Sbjct: 2 MHGNCTISIDNRLFTLSEGNIIFIPANSVHRTSYIGELVPERTYIEFSKDYIETISQTLG 61 Query: 106 LSFYDSRT---TSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLH 162 ++ + + ++ ++ L R E + + S + Q + Q L+++L+ Sbjct: 62 KNWAEHNLWGHILYIEKEKREKIDFLFR-EIQKEYDIVDGYSDCCIRQ-LFQYLIINLIR 119 Query: 163 LCRSVVNMPP--GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQ 220 L R+ ++ NS + + ++ +N+ +T + VA N+ P++ S F Sbjct: 120 LDRNTKDIKEFITNSDNKINQNMIIAAKYIAENFKNDITLKDVASHLNLNPSYFSSKFKA 179 Query: 221 HGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + F EY+R +R+ A L + LS+ ++A CGF +S+YF F+ G++P E+ Sbjct: 180 FNNIGFAEYLRNIRVNHAEWYLIETDLSLSDIASECGFCNSNYFGDTFKLVNGISPSEFR 239 Query: 281 ARFQ 284 + Sbjct: 240 KNNK 243 >UniRef50_UPI0001C35ADD AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35ADD Length = 304 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 121/283 (42%), Gaps = 20/283 (7%) Query: 15 DLF--SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 DLF N Q+ ++ + + +D +L E + K++++ Sbjct: 2 DLFYHETFTQNEQMPMQLRLHRGQINYMILEHWHRSIEIDYLLDCEADFYINGKKKQVAA 61 Query: 73 GEMLFIPARAAN------LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLP 126 G + I + + +PV+ + + +F + F + +++ Sbjct: 62 GSITLINSGDIHALEPREVPVDTEDKIHGISLF----ISYEFLKKICPEIDQITFELEGQ 117 Query: 127 SLQRGEGEAMLTALTHLSRSPLEQ-------NIIQPLVLSLLHLCRSVVNMPPGNSQPRG 179 + E + + +L L +P E+ ++ L+ LL + N SQ Sbjct: 118 EERLKELKEVFNSLIRLELAPPEEYGYLKKNAMLHSLMYLLLTYFKEPRNQSSVKSQKYI 177 Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 D L + ++V++NY +PLT + VA F+++ +L+++ ++ F ++ VR++KA Sbjct: 178 DRL-RVVLDYVEENYREPLTLQGVADHFSVSMEYLARILKKYTGNTFKTHLNQVRVSKAF 236 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L + S+ E+A R GF D+ VFR +G+TP +Y + Sbjct: 237 RDLLETDYSVLEIAMRNGFSDTRSLINVFRDTYGMTPSQYRKK 279 >UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDH7_9CLOT Length = 331 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 100/250 (40%), Gaps = 17/250 (6%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP-VNNKPVMLLSLVFAPT 102 D+ L V G N+ E+++ L +G++L + A + P ++ L +++ + Sbjct: 73 HNHDYFELMYVRSGSCFNVFESEKITLHQGDILLLNPNAKHDPFTTSEGDCLFNIMLSRE 132 Query: 103 W-------------LGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLT--ALTHLSRSP 147 L +F+ + + PS L L ++++ Sbjct: 133 LFEQSMLPLLSDNHLISNFFVDYMYHINKTQDYLYFPSRNTKAISPFLEEIILEYINKEQ 192 Query: 148 LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 +I+ ++ L + + L + ++ + + +T S+A F Sbjct: 193 GYVQVIESALVILFARLGRIFAQENHIESSVSNKLIVDVIVYLNQH-SADVTLSSLAAEF 251 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 + +LSKL +H F + + ++ KA+ +L+ S E+AQ GF D+ Y R Sbjct: 252 GYSSGYLSKLIRKHTGQSFTDILSNFKLEKAKHLLETTAHSTDEIAQLTGFHDASYLSRS 311 Query: 268 FRRQFGLTPG 277 FR ++G+TP Sbjct: 312 FRSKYGVTPS 321 >UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGE3_9CLOT Length = 371 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 102/255 (40%), Gaps = 17/255 (6%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLL-SLVFAPT 102 +F L V G ++ L +G + + A+ V L +++ + Sbjct: 109 HTHEFFELIYVYSGTCYCNFSGEEFCLSKGTIWIFNTQCAHSVVIPDDGSTLVNILLRKS 168 Query: 103 WLGLSFYDSRTTSLL-------------HPARQIQLPSLQRGEGEAML--TALTHLSRSP 147 + + + L +Q + E E + L + ++S Sbjct: 169 TFSSAILNMIQDNDLFLDFFLKSIYDANTQPHHMQFQAQPGSEIEFYIFKIILEYANQSN 228 Query: 148 LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 Q+I++ ++ +LL + +I ++ D+Y +T +S A+ F Sbjct: 229 YRQSIMKLMLSTLLTELARDYQLRSETEDKTASIDILNIIAYISDHYT-DVTLKSTAEHF 287 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 + +P+++SK ++ F+EY++ +++KA +L L + +VA G+ F R Sbjct: 288 HYSPDYISKCIYKYTGYSFLEYMKRYKLSKAEYLLLHTKLPLEQVASMVGYSQRSSFDRE 347 Query: 268 FRRQFGLTPGEYSAR 282 F++ + LTP Y ++ Sbjct: 348 FKKHYSLTPSRYRSQ 362 >UniRef50_UPI000178A1A9 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A1A9 Length = 309 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 10/274 (3%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 S + + ++ P F VL G + ++ L G + Sbjct: 23 LSRIEQQELSIRIHYWGFMPRHYDNTEHKHSFFEACYVLTGNGTYIEGEREFHLYPGTLF 82 Query: 77 FIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLP-SLQRGEGEA 135 + + + L + F P + + LL + ++ G Sbjct: 83 LSRPGVQHQIRSKDGLALCYVAFEPEETATGEFYAAAFRLLAKQGNPVVTEGARQASGLL 142 Query: 136 MLTALTHLSRSPLEQN-------IIQPLVLSLLHLCRSVVNMPPGNSQPRGD--FLYHSI 186 L+ L+ +Q+ + L++S L + + P ++ + ++H Sbjct: 143 WLSLLSLFHTGSGKQHPPQMLNSLAASLIVSFLTVHGPGFHHEPSGAEANDEGTSMFHQA 202 Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 +++DN +PL+ E VA +IT HL++LF ++G F+ YV+ R+ +A+ +L Sbjct: 203 ELFIKDNLNEPLSLERVAGHLHITTRHLTRLFRKYGHQSFVHYVQEQRVQQAKHMLLHTD 262 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 I E+A CGF YF RVF + G+TP + Sbjct: 263 RQIKEIAVCCGFESVHYFTRVFTSKLGVTPARFR 296 >UniRef50_C6J2H9 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2H9_9BACL Length = 535 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 10/168 (5%) Query: 116 LLHPARQIQ-LPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGN 174 L+H R+++ L L R + E + L R P+ + +++SL+ RS ++ Sbjct: 372 LIHLLREMRELHMLPREQEEGLWKRL----REPMSLKELLSIIVSLIEHARSSLS----- 422 Query: 175 SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 ++ + L S N++Q++ + E +A + I+ ++ LF H F+EY+ R Sbjct: 423 AKKSTELLMMSAQNYIQNHLGRDFGIEDIADYLGISSSYFCLLFKNHFGETFVEYLTKQR 482 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 M A+ +L+ SI ++ G+ + YF +VF++ G+TP +Y + Sbjct: 483 MEMAKCLLRTSERSIAQIGSSIGYQERRYFTKVFQKYTGMTPSDYRQK 530 >UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A3T9_ENTGA Length = 296 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 104/265 (39%), Gaps = 12/265 (4%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN 89 + + + + + + + G L+ K ++ G ++ I + + Sbjct: 18 IDRSRRDSIYNMVKHWHSECEIQYFIEGNRYFLIGEKTYKIQPGTLVMIHPDCVHNTFSG 77 Query: 90 KPVMLLSLVFAPT-----WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH-- 142 K + ++ + S T L IQ+P R + +L + Sbjct: 78 KYIYHDRVLVLYEASKFPRIAQSMGIDLETFFLKHHGIIQIPPADRSYVQTLLAKIADEV 137 Query: 143 LSRSPLEQNIIQPLVLSLLHLCRSVVNMP-----PGNSQPRGDFLYHSICNWVQDNYAQP 197 + + Q +++ ++ L + + N P S + L + I +++ NYA Sbjct: 138 IHKEYNYQVMVETKLIELFIFIQRIKNFRGLSDEPAESLGKQSELVNQIAAFIRRNYASI 197 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 + E +A F + ++L ++F + EY R+ +++ +L+ I E+A++ G Sbjct: 198 HSLEQIASSFYLDKSYLCRIFKRATGYTITEYTNIQRIRQSQRLLEDTDWDIAEIARKSG 257 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSAR 282 + + Y+ RVF++ +P +Y + Sbjct: 258 YSNITYYNRVFKKYTETSPLQYRKK 282 >UniRef50_D1NA91 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NA91_9BACT Length = 263 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 100/249 (40%), Gaps = 16/249 (6%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLL 95 S V L G+ + ++ G++L I A+ ++ PV Sbjct: 22 DNSTNVPVHTHPATELIYQAGGQCTVTIGKEKFLCTPGDLLVISPETAHNQISEGPVKT- 80 Query: 96 SLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQP 155 VF + SR T L+H P L M+ ++ R L ++ Sbjct: 81 --VFVTAVIDARLLSSR-TRLIHFGNDPWTPRLMN-----MIQEMSREVRYELCGGVLYS 132 Query: 156 LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 LV + R + + ++ N+ +PL + +A+ ++ ++L Sbjct: 133 LVRHIAQFERD-------QEFGTRNRIVTRAIKLIEANFNRPLNTKLIARSVGVSESYLR 185 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 +F + + +++ RMA AR +LQ+ + I EVA +CG+PD+ YF R F++ + Sbjct: 186 AVFLREKKISIFLFLQNYRMAHARRLLQQPYCDIKEVAFQCGYPDAGYFARQFKKIHLCS 245 Query: 276 PGEYSARFQ 284 P E+ + Q Sbjct: 246 PTEFRFKLQ 254 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 93/266 (34%), Gaps = 16/266 (6%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL--PVNNKPV 92 + + + V G ++ G++ I + PV+N+P Sbjct: 42 ENGRPDILFHWHPELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDNQPH 101 Query: 93 MLLSLVFAPTWLGLSFYDSRTTSLLHPARQ--------IQLPSLQRGEGEAMLTALTHLS 144 +L F LG S D + L P + ++ E + +L + + Sbjct: 102 HTDTLHFHLDMLGQSLVDPLSLRYLQPLQNSNFKFKQCLRPSDEGYTEIKDLLFKIFKMI 161 Query: 145 RSPLEQ-----NIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 R ++ LL+ R +V + R + I +++ +YA+ LT Sbjct: 162 RQKERHYELLLKSKLEELIYLLYFYR-LVERKTSDDHYRKNEKIREIIDYINQHYAENLT 220 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 E +++ + H +F QH E++ R+ A L+ + E+A GF Sbjct: 221 IEKLSELMGYSKTHFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVGFN 280 Query: 260 DSDYFCRVFRRQFGLTPGEYSARFQG 285 + F R F+ + TP +Y Sbjct: 281 NLSNFNRQFKHYYDQTPSQYRKTHSN 306 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 58/112 (51%) Query: 174 NSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 + + + H I +++ +Y ++ + +A F ++ ++S+ F Q + +++ + Sbjct: 427 QIHSKDNHIIHDIAQYLEQHYHDEISLQQIAGKFFLSREYISRKFKQEFGVTLSDFLGRI 486 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 R+ KA+ +L + I ++A+ G+ D YF +VF++ G TP EY + Sbjct: 487 RIEKAKTLLLNPQIRIAQIAEMVGYQDEKYFSKVFKKMEGFTPNEYRKKHMN 538 >UniRef50_B8I425 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I425_CLOCE Length = 538 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 4/155 (2%) Query: 126 PSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHS 185 + EGE + +L L + + L+ + S VN S + Sbjct: 384 TEKKYSEGEDI-ASLIKLIEKTDKAEELNSLLEEVAVRIASKVNSFNNKSIK---LILRK 439 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 +++Q++Y + +T VA+ ++ ++S++F + F++Y+ VR+ KA+ +L+ Sbjct: 440 AIDYIQEHYNEQVTLNEVAENIYVSTFYISRMFKKELGKSFVDYLNDVRIDKAKELLKDV 499 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 +EVA++ G D YF ++F++ G+TP EY Sbjct: 500 RYKTYEVAEKVGISDPHYFSKLFKKYSGMTPSEYR 534 >UniRef50_A9KQP4 Two component transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KQP4_CLOPH Length = 533 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 62/135 (45%) Query: 147 PLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQF 206 +E L L + +++DNY + L+ E V++ Sbjct: 395 IVEIEQYDALRLWFAERIEIACRNVENKKKVTSISTVEKAKLYIRDNYQKDLSLEEVSRQ 454 Query: 207 FNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCR 266 +I+P + SK+F + FI+Y+ +RM+ A+ +L + S+ E+ G+ D +YF R Sbjct: 455 VDISPYYFSKVFKEETGTNFIDYLTELRMSVAKQLLLESERSMKEIGIMVGYSDPNYFSR 514 Query: 267 VFRRQFGLTPGEYSA 281 F++ G+TP EY Sbjct: 515 SFKKNIGITPTEYKE 529 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 98/252 (38%), Gaps = 15/252 (5%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLL---SLVFA 100 + L ++ +G+ + + G+++F+ + ++ K ++ +++F Sbjct: 39 HWHNEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLHS-ISQKDYSIMEYENILFK 97 Query: 101 PTWLGLSFYDSRTTSLLHPARQIQLPS-LQRGEGEAMLTALTHL---------SRSPLEQ 150 + L S YD + P L +L L R Q Sbjct: 98 SSLLKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQ 157 Query: 151 NIIQPLVLSLLHLCRSVVNMPP-GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 ++ + + +L S + + +I ++V +++ ++ E +A Sbjct: 158 LAVKSYLFQIFYLLISNCGLNQIKPISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFY 217 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 + ++ K F + M F++Y+ R+ A +L I +A GF + YF R F+ Sbjct: 218 SKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFK 277 Query: 270 RQFGLTPGEYSA 281 +++G+TPG+Y Sbjct: 278 KKYGITPGKYRK 289 >UniRef50_B1YJP0 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=B1YJP0_EXIS2 Length = 234 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 90/193 (46%), Gaps = 8/193 (4%) Query: 89 NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPL 148 K ++L+ V P GLS + H + + + + M A+ H S L Sbjct: 46 EKIDLMLTDVEMPGLDGLSLLEWTKN---HHPKVVTIVLTGYDDYTYMRRAILHQSFDYL 102 Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFN 208 + I ++ L ++ + I ++ +YA+ LT + +++ F Sbjct: 103 LKPIDPDILNDALGRAMELIGPVQEQGEA-----IDQIAKYISTHYAEELTLQLMSERFY 157 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 ++ ++S+ F Q ++ +Y++ +R+ +A+ +L + I+E+A G+ D YF +VF Sbjct: 158 LSREYISRRFKQRFSVNLSDYIQTIRLNRAKELLGETDARIYEIALEVGYHDDKYFRKVF 217 Query: 269 RRQFGLTPGEYSA 281 ++QFG+TP E+ Sbjct: 218 KKQFGMTPNEFRE 230 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 93/250 (37%), Gaps = 11/250 (4%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAP-T 102 + + + GE + EG+M+ I + ++ + + A + Sbjct: 36 HWHEHLEILYFVSGEATLECGSTTFTAKEGDMIVINRNELHYGLSQSDHLFYYALIADFS 95 Query: 103 WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVL---- 158 L D+ + P Q +L R G L + + + Q L + Sbjct: 96 LLQSHSLDAPEMKFITPITQNRLIFENRISGADALAPMLSIIKELERQEFGYELAIKSEL 155 Query: 159 ------SLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 L +V+ + + + I +++++Y + L+ E ++ ++ Sbjct: 156 YRLLTLLLRGYVATVLTQDEYVERMKNVERFAPIFKYIEEHYREDLSVEQLSGMAGLSRF 215 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 H S+LF + EYV R+ +A +L++ L++ E+A GF D YF R F++ Sbjct: 216 HFSRLFKEISGRTVTEYVNETRLNRADYLLRESPLTVSEIAAATGFNDIYYFSRTFKKYK 275 Query: 273 GLTPGEYSAR 282 + P + Sbjct: 276 RMAPSALRKK 285 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 106/280 (37%), Gaps = 16/280 (5%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 + ++ +P L V+ + + + L V GE + + G+MLF Sbjct: 8 NTVMTDPALPINVFHPTFGIGCSLPLHWHEHFELIYVESGEVLYTIGGQPFPTKPGDMLF 67 Query: 78 IPARAANLPVN---NKPVMLLSLVFAPTWLGLSFYD--SRTTSLLHPARQIQLPSLQRGE 132 + + + + N+P + +LVF P+ LGL + I Q Sbjct: 68 VNSGELHSAASLNPNEPFTVYALVFNPSILGLKEPHIVDLVAPYTNGMSMIASRIEQTDS 127 Query: 133 GEAMLTALTHLSRSPLEQ----------NIIQPLVLSL-LHLCRSVVNMPPGNSQPRGDF 181 +L T EQ + Q L L + N+ Sbjct: 128 LYPLLKQTTLRLAGEFEQKPRGYELAVRSYCQLLFTWLSREFTVMQRSDTEMNAFRARTN 187 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 + + ++ + A+ +T E A F +++P H ++F + F++Y+ R+ +A + Sbjct: 188 RFKELLTRLESDVAERVTVEQAASFVHMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYL 247 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 L+ +S+ ++A G + F ++FR+ G++P + Sbjct: 248 LKNTAMSVTDIAAEIGCSSINSFSKLFRQLRGVSPRDLRK 287 >UniRef50_C0E8H9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8H9_9CLOT Length = 358 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 109/269 (40%), Gaps = 18/269 (6%) Query: 33 ASQPASLPVGSLCIDFPRLDIVLRGEYGNLL-EAKQQRLVEGEMLFIPARAANLPVNNKP 91 +P P DF L V RG++ N + + E ++ + A +LP P Sbjct: 84 PGEPQRKPKLGHYHDFYELAFVYRGKFINEFPNHDRIEIDESSLILLNPYAVHLPYTQTP 143 Query: 92 V-MLLSLVFAPTW-------------LGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAML 137 ++ +++ ++ + +F+ H + + Q + Sbjct: 144 DDIVFNILLRKSFVENKLVNMISDNKIFFNFFLDSIYGNEHITNFLVFKNNQEVSNLILS 203 Query: 138 TALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQP--RGDFLYHSICNWVQDNYA 195 + R + ++ +++L + + + + I ++++ NY+ Sbjct: 204 LIMELCDRQLYFEQVVNSYLVALFAILVRIHQQEFSEAMDGLAKNRTIADILSYIRYNYS 263 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 ++ VA+ FN + ++S+L Q +M F E V R+ A L+ ++S ++ + Sbjct: 264 H-VSLAEVAEHFNYSIGYMSRLIKQETSMSFSEIVSNYRLEIACNYLKNSNISTEKITEI 322 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 G+ D+ YF + F++Q G +P +Y RFQ Sbjct: 323 IGYSDTSYFYKAFKKQQGFSPIDYRKRFQ 351 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 91/260 (35%), Gaps = 20/260 (7%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL--------PVNNKPVMLL 95 C + L IV G + + G+M I +L ++ Sbjct: 29 HCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCDSLTGKNGSEESACE 88 Query: 96 SLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQP 155 L F+P+ + A ++ + LT L++ Sbjct: 89 ILYFSPSLFPDNM--DGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRKQVQRLDKGQGIG 146 Query: 156 LVLSLLHLCRSVVNMPP----------GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQ 205 + LL L ++ + R ++C ++++++ + L +++A+ Sbjct: 147 RIRWLLALLDTLARSQETSLIASGPVRNGTALRRQETVDTVCRYLREHFRENLCLQAIAR 206 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 + P+ L + F Q ++ +R+ A +L + LSI +A GF + +F Sbjct: 207 EACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLSISAIAWETGFANLSHFN 266 Query: 266 RVFRRQFGLTPGEYSARFQG 285 R F+ G TPGEY + Sbjct: 267 RQFKSLTGQTPGEYRKNIRS 286 >UniRef50_Q65Q30 HTH-type transcriptional activator rhaR n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=RHAR_MANSM Length = 276 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 101/248 (40%), Gaps = 4/248 (1%) Query: 38 SLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSL 97 P DF + I+ G + + + G +L+I + + + L ++ Sbjct: 28 QPPFPLHRHDFNEIVIISAGNGIHFWNDEIHPITTGNVLYIESGDKHKYGEVDKLKLDNI 87 Query: 98 VFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSP--LEQNIIQP 155 ++ P L L + + +++ + +++++ L S+ ++ + Sbjct: 88 LYRPEKLSLFPIMKDYIPHNNEKKSLRINQETLVQLQSLISQLEIESKKTNKSSMHLSEA 147 Query: 156 LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 + L +L L N S+ + + + +Q + + + + Sbjct: 148 IFLQILILICRT--QQQENKAYSDISKLESLFSALNQSISQEFYLADFCRQHQLAVSSVR 205 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 ++F Q M +Y++ +R+ +A +L+ S+ +A RCG+ DS+YF VF + F T Sbjct: 206 RIFKQQTNMTIAQYLQKLRLCRAATLLRNTSESVANIAIRCGYSDSNYFSSVFGKTFSCT 265 Query: 276 PGEYSARF 283 P EY +RF Sbjct: 266 PTEYRSRF 273 >UniRef50_UPI0001C34DA4 positive regulator for rhaBAD operon n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34DA4 Length = 286 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 25/272 (9%) Query: 29 RVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV- 87 R++ +QP P+ DF + I L G G +E L +++ +P + + P Sbjct: 23 RLFHLTQPVRAPISYHYHDFDKAVIFLGGASGYSIEGTSYTLEPYDIVLVPHYSIHRPEI 82 Query: 88 -NNKPVMLLSLVFAPTWLGLSFYDSRTTSLL------HPARQIQLPSLQRGEGEAMLTAL 140 P L L +P +L S L + ++LPS+Q + +L Sbjct: 83 KPGAPYSRLILYLSPEFLASEEGGVGKLSRLFSSAGETSSYVLRLPSMQ---NSLLFESL 139 Query: 141 THLSRSPLEQNIIQPLVLSLL------HLCRSVVN---MPPGNSQPRGDFLYHSICNWVQ 191 L ++ EQ L+ LL +L R+ V+ +P S P L S+ + Sbjct: 140 LRLEKACSEQGFCDVLLRRLLLMEFLIYLNRAAVSGEAVPLTASCPNAAVL--SLMRLIC 197 Query: 192 DNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHE 251 +N + + +++A ++ +H+ +LF + +EY+ R+ AR +L LS+ E Sbjct: 198 ENPSADFSIDALATRVFLSRSHMMRLFKRETGCTLMEYITEKRLLMARALL-DSGLSVTE 256 Query: 252 VAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 RCGF + F R +++ FG PG + Sbjct: 257 TCYRCGFKNYSAFLRAYKKSFGSPPG--RRKL 286 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 14/284 (4%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 L + + R+ + P L + Y K+ L E Sbjct: 5 LVGLHETVNYRKDMQIRLHNNDVCENYPPHWHTP--FELIMPTESGYSVHCGEKEYVLDE 62 Query: 73 GEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQI---QLPSLQ 129 G+++ I + + + + + + + L D S++ PA I + P + Sbjct: 63 GDIIIICPGVIHELFSPPKGVRIIFLVSLAQIDLQELD-LVISMISPAILISPEKFPQIH 121 Query: 130 RGEGEAMLTALTHLSRS-PLEQNIIQPLVLSLLHLC-RSVVNMPPGNSQPRGDFLYHS-- 185 ML R+ P ++ I L +L L R + N + + + Sbjct: 122 AQIHRLMLEIRDEYFRNLPYTESSIYAKFLEILVLVGRCYAEIAQHNFEAKNNKQQEYME 181 Query: 186 ----ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 ICN++ ++YA+PL+ E VA + H ++LF Q+ F +Y+ R+A A+ + Sbjct: 182 KFLFICNYINEHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHL 241 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 L +LS+ +++ +CGF + F R+FR+ G TP E + G Sbjct: 242 LVDKNLSVLDISLQCGFSNLSSFLRMFRKLTGFTPTELRKMYDG 285 >UniRef50_C6CT83 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT83_PAESJ Length = 472 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 88/179 (49%), Gaps = 9/179 (5%) Query: 108 FYDSRTTSLLHPARQIQLP---SLQRGEGEAMLTALTHLSRSPLE-QNIIQPLVLSLLHL 163 + S H R + + G+ E L + L +S + +++ L ++ Sbjct: 295 LFREDALSTRHAFRVYNMTISFLFKLGQTEETLYSYEQLVQSFGDVFDMLGELQALVVRH 354 Query: 164 CRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGT 223 CR PP + ++ I +V D++ + L+ + +++ F + P+++S+LF + Sbjct: 355 CRGGEAHPPETK----NRTFNQILQYVTDHFREELSLQGLSEQFFMNPSYISQLFKKEVG 410 Query: 224 MRFIEYVRWVRMAKARMIL-QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 F+ Y+ +R+A A +L + SIHE+A++ G+ D YF R+F++ G TP +Y + Sbjct: 411 ETFVGYISQLRIAHACKLLDENDDYSIHEIAEKIGYNDYFYFARLFKKMTGKTPTQYRS 469 >UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV0_9FIRM Length = 309 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 110/275 (40%), Gaps = 19/275 (6%) Query: 30 VWFASQPASLPV-GSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP-- 86 V +PA+ + + + ++LRG E + G ++ + + ++ Sbjct: 26 VEHMVRPANFDMRYNHFHQEYEIYLLLRGRRQMFFENRAYEAQAGNLILVDSGQIHMSHS 85 Query: 87 VNNKPVMLLSLVFAP------TWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA--MLT 138 + P V + F + + + H I + ++ L Sbjct: 86 IVGDPETEYERVILYVDRDIVEKVDKMFPELKIGAFFHKHYGIYELTPKQTANTRRLFLQ 145 Query: 139 ALTHLSRSP--LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF------LYHSICNWV 190 + L ++ + I+ L+L ++ RS + N G + I +++ Sbjct: 146 IMEELDKAEPMSQTAILSELILGFIYFRRSNQQVACLNDVQEGKASGGKFDAVYQISDYI 205 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 D++ + L+ +S+A+ F I+ +LS+ F + EY+ +R+ KA+ +L+ LS+ Sbjct: 206 SDHFQERLSLDSLAEQFYISKYYLSRSFHEVTGFGINEYINILRVKKAQSLLETTTLSVS 265 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 E+A R GF Y RVF++ +TP +Y Sbjct: 266 EIASRTGFESITYLGRVFKKYQHVTPAQYRKSLTS 300 >UniRef50_A9KJM4 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJM4_CLOPH Length = 517 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 13/219 (5%) Query: 64 EAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQI 123 E KQ E + R N N V LL L+ + L + LL Sbjct: 302 EKKQFYTEMEEKFLLNIRDGNKEALNNLVTLLDLLSNYSMLD------KKNKLLELIVMA 355 Query: 124 QLPSLQRGEGEAMLTALTHLSR---SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 + + G E+ T L R S E I S+ ++ +SV + NS Sbjct: 356 SNKARRDGGSESEYTNYIELLRELDSLAEGEINSWAFRSVNYVLKSVRDNQDENSFAA-- 413 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 + +V +Y + +T E VA NI+P + S++F + + +++Y+ +R+ KA+ Sbjct: 414 --IRKVLRYVDTHYDEDITLEEVAGILNISPQYFSRIFKEKMGVTYVDYLTNIRIKKAQE 471 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 L +I E+ G+ D +YF RVF++ G+TP ++ Sbjct: 472 WLIYSDKNIQEICYMVGYKDPNYFSRVFKKTVGVTPKQF 510 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 4/142 (2%) Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 ++ + S EQ I++ ++L L + Q + + ++ NY++ +T Sbjct: 374 ISQILNSSYEQ-IVEIFKKAVLSL---FSKAKTKHEQIINNDSINKAIEFINQNYSEEIT 429 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 ++ FN P + SKLF ++ + F Y+ +R+ KA +L+ SI E++ GF Sbjct: 430 LSQISSTFNFNPYYFSKLFKKYTGVSFKTYLTKLRIQKACQLLKNTSKSIKEISFAVGFS 489 Query: 260 DSDYFCRVFRRQFGLTPGEYSA 281 D +YF + F++ G+TP + + Sbjct: 490 DPNYFIKAFKKFTGMTPSAFRS 511 Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 59/158 (37%), Gaps = 13/158 (8%) Query: 138 TALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP 197 L H +P + +I+ + L L + + + + + + + Sbjct: 309 AKLIHSINNPTQIPMIENYITQLCKLYIELFGENNLKYKVIKLIIMLLLETGIATS-DES 367 Query: 198 LTRES-VAQFFNITPNHLSKLFAQHGTMRFI-------EYVRWVRMAKARMILQKY---H 246 + E ++Q N + + ++F + F + + + KA + + Sbjct: 368 IDVEKLISQILNSSYEQIVEIFKKAVLSLFSKAKTKHEQIINNDSINKAIEFINQNYSEE 427 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +++ +++ F + YF ++F++ G++ Y + + Sbjct: 428 ITLSQISSTFNF-NPYYFSKLFKKYTGVSFKTYLTKLR 464 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 102/269 (37%), Gaps = 9/269 (3%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 L L + F+ F L V+ GE +Q L G+++ Sbjct: 11 EDLQNLNAKLLSIAFSKDEGDWKSIMHTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVI 70 Query: 78 IPARAANLPVNNKPVMLLSLVFAPTWLGL-SFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 IP + +++ L V + S D + PS+ E Sbjct: 71 IPPYTEHTERSSQNHPLEYYVLGIDGISFLSQKDRECAQVFCNFE--HDPSIH----ELF 124 Query: 137 LTALTHLSRSPLEQNII--QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNY 194 L + + I L + +L + RS +P + R I ++ NY Sbjct: 125 RQMLYEIRTAQYGSQTICQHLLEILILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNY 184 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 A+ +T +++ ++ ++ F ++ + I+Y+ R+ +A+ +L+ + SI ++A Sbjct: 185 AEHITLDTLTGLTHMNKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIAS 244 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 GF YF ++FR+ F +TP +Y Sbjct: 245 STGFSSQSYFTQIFRKNFNMTPVKYRQEH 273 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77396 Uncharacterized HTH-type transcriptional regulat... 294 3e-78 UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=En... 284 3e-75 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 225 1e-57 UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=E... 223 6e-57 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 221 2e-56 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 221 3e-56 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 219 1e-55 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 217 4e-55 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 217 4e-55 UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein ... 216 6e-55 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 216 7e-55 UniRef50_P32677 Uncharacterized HTH-type transcriptional regulat... 213 4e-54 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 213 7e-54 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 213 8e-54 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 211 2e-53 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 211 3e-53 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 211 3e-53 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 210 3e-53 UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae Rep... 210 4e-53 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 210 5e-53 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 210 5e-53 UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=T... 208 1e-52 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 208 2e-52 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 207 3e-52 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 207 3e-52 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 207 3e-52 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 207 3e-52 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 206 5e-52 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 206 6e-52 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 206 6e-52 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 206 9e-52 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 205 1e-51 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 205 1e-51 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 205 1e-51 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 205 1e-51 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 205 2e-51 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 205 2e-51 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 205 2e-51 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 204 2e-51 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 204 3e-51 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 203 5e-51 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 203 5e-51 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 203 6e-51 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 203 7e-51 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 203 7e-51 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 203 8e-51 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 202 1e-50 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 201 1e-50 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 201 2e-50 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 201 2e-50 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 201 2e-50 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 201 2e-50 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 201 2e-50 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 201 2e-50 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 201 2e-50 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 201 2e-50 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 201 3e-50 UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Gr... 200 3e-50 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 200 3e-50 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 200 4e-50 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 200 5e-50 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 200 5e-50 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 200 5e-50 UniRef50_A7ML57 HTH-type transcriptional activator rhaR n=92 Tax... 200 5e-50 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 200 6e-50 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 200 7e-50 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 200 7e-50 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 199 7e-50 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 199 8e-50 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 199 1e-49 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 199 1e-49 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 198 1e-49 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 198 2e-49 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 198 2e-49 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 198 2e-49 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 198 2e-49 UniRef50_C4LCV7 Transcriptional regulator, AraC family n=1 Tax=T... 198 2e-49 UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16... 198 3e-49 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 197 3e-49 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 197 3e-49 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 197 3e-49 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 197 3e-49 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 197 3e-49 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 197 3e-49 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 197 4e-49 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 197 4e-49 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 197 5e-49 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 196 5e-49 UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=M... 196 5e-49 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 196 6e-49 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 196 6e-49 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 196 7e-49 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 196 7e-49 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 196 7e-49 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 196 7e-49 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 196 8e-49 UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=C... 196 9e-49 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 196 1e-48 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 195 1e-48 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 195 2e-48 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 195 2e-48 UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=S... 195 2e-48 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 195 2e-48 UniRef50_A7FN79 HTH-type transcriptional activator rhaR n=29 Tax... 195 2e-48 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 195 2e-48 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 195 2e-48 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 194 3e-48 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 194 3e-48 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 194 4e-48 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 194 4e-48 UniRef50_UPI0001789626 transcriptional regulator, AraC family n=... 193 4e-48 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 193 5e-48 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 193 5e-48 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 193 5e-48 UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=C... 193 6e-48 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 193 7e-48 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 193 7e-48 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 193 7e-48 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 193 8e-48 UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=S... 192 1e-47 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 192 1e-47 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 192 1e-47 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 192 1e-47 UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=C... 192 1e-47 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 192 1e-47 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 192 1e-47 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 192 1e-47 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 192 1e-47 UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax... 192 1e-47 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 192 1e-47 UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=F... 191 2e-47 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 191 2e-47 UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=V... 191 2e-47 UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=P... 191 2e-47 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 191 2e-47 UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostri... 191 2e-47 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 191 2e-47 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 191 2e-47 UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus g... 191 2e-47 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 191 2e-47 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 191 3e-47 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 191 3e-47 UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostri... 191 3e-47 UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral... 191 3e-47 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 190 3e-47 UniRef50_UPI0001B9EC7D transcriptional regulator, AraC family n=... 190 4e-47 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 190 4e-47 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 190 4e-47 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 190 4e-47 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 190 5e-47 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 190 6e-47 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 190 7e-47 UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 T... 190 7e-47 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 189 8e-47 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 189 8e-47 UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Ta... 189 8e-47 UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=... 189 9e-47 UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides Re... 189 9e-47 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 189 9e-47 UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminoc... 189 1e-46 UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=V... 189 1e-46 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 189 1e-46 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 189 1e-46 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 189 1e-46 UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C... 189 1e-46 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 189 1e-46 UniRef50_C9Y024 Putative uncharacterized protein n=1 Tax=Cronoba... 188 1e-46 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 188 1e-46 UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Ta... 188 1e-46 UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=P... 188 1e-46 UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC fami... 188 1e-46 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 188 2e-46 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 188 2e-46 UniRef50_Q2SE27 Putative uncharacterized protein n=1 Tax=Hahella... 188 2e-46 UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=V... 188 2e-46 UniRef50_C6CZY9 Transcriptional regulator, AraC family n=1 Tax=P... 188 2e-46 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 188 2e-46 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 188 2e-46 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 188 2e-46 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 188 2e-46 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 188 2e-46 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 188 2e-46 UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostri... 188 2e-46 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 188 3e-46 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 188 3e-46 UniRef50_C6D0F8 Transcriptional regulator, AraC family n=1 Tax=P... 187 3e-46 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 187 3e-46 UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostri... 187 3e-46 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 187 4e-46 UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 ... 187 4e-46 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 187 4e-46 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 187 4e-46 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 187 5e-46 UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=... 186 5e-46 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 186 5e-46 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 186 5e-46 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 186 6e-46 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 186 6e-46 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 186 6e-46 UniRef50_A9KRM0 Transcriptional regulator, AraC family n=3 Tax=F... 186 6e-46 UniRef50_C0EHT5 Putative uncharacterized protein n=1 Tax=Clostri... 186 6e-46 UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID... 186 6e-46 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 186 7e-46 UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=A... 186 7e-46 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 186 9e-46 UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 T... 186 1e-45 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 186 1e-45 UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=L... 186 1e-45 UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacteri... 185 1e-45 UniRef50_A8SUZ2 Putative uncharacterized protein n=2 Tax=Clostri... 185 1e-45 UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=C... 185 2e-45 UniRef50_C4Z2W7 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium el... 185 2e-45 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 184 2e-45 UniRef50_UPI0001C35ADD AraC family transcriptional regulator n=1... 184 2e-45 UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=C... 184 2e-45 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 184 3e-45 UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=C... 184 3e-45 UniRef50_C6DJR5 HTH-type transcriptional activator rhaR n=5 Tax=... 184 3e-45 UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P... 184 3e-45 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 184 4e-45 UniRef50_C3RI67 Transcriptional regulator n=2 Tax=Bacteria RepID... 184 4e-45 UniRef50_C7PJ33 Transcriptional regulator, AraC family n=1 Tax=C... 183 4e-45 UniRef50_UPI000197C3B0 transcriptional regulator, AraC family pr... 183 4e-45 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 183 4e-45 UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=K... 183 4e-45 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 183 4e-45 UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu... 183 5e-45 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 183 5e-45 UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostri... 183 5e-45 UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n... 183 5e-45 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 183 5e-45 UniRef50_B4D507 Transcriptional regulator, AraC family n=1 Tax=C... 183 6e-45 UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=S... 183 6e-45 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 183 7e-45 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 183 8e-45 Sequences not found previously or not previously below threshold: UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 196 5e-49 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 191 2e-47 UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bactero... 190 4e-47 UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostri... 190 4e-47 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 190 6e-47 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 189 8e-47 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 189 1e-46 UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verruco... 188 2e-46 UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=B... 186 5e-46 UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula m... 186 6e-46 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 185 2e-45 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 184 2e-45 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 184 3e-45 UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T... 184 4e-45 UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=... 183 4e-45 >UniRef50_P77396 Uncharacterized HTH-type transcriptional regulator ypdC n=61 Tax=Enterobacteriaceae RepID=YPDC_ECOLI Length = 285 Score = 294 bits (752), Expect = 3e-78, Method: Composition-based stats. Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG Sbjct: 1 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60 Query: 61 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA Sbjct: 61 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120 Query: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD Sbjct: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM Sbjct: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG Sbjct: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 >UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=D2THV7_CITRO Length = 284 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 232/284 (81%), Positives = 253/284 (89%) Query: 1 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG 60 MK PGLPADQQFFADLFSGLVLNPQ LGRVWFA+ +LP GSLC+D PRLDIVLRGEYG Sbjct: 1 MKQPGLPADQQFFADLFSGLVLNPQRLGRVWFATPGTALPGGSLCLDLPRLDIVLRGEYG 60 Query: 61 NLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA 120 N LE Q RLVEGEMLFIPARAANLP++ KPVMLLSLVFAP W GLSFYD+R+ SLL P Sbjct: 61 NQLEKSQHRLVEGEMLFIPARAANLPISEKPVMLLSLVFAPAWFGLSFYDTRSASLLRPL 120 Query: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 R+I+LP QRGEGEAMLTALTHLSRSP EQ IIQPLVLSLLHLCRSVVN PP +PR + Sbjct: 121 RRIELPHPQRGEGEAMLTALTHLSRSPQEQAIIQPLVLSLLHLCRSVVNTPPDIRRPRAE 180 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 FLYHSICNWVQDNYA+PL+RESVA FFNITPNHLS+LF +HGTM F++YVRWVRMAKARM Sbjct: 181 FLYHSICNWVQDNYARPLSRESVATFFNITPNHLSRLFTRHGTMSFVDYVRWVRMAKARM 240 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ILQKYHLS++EVAQRCG+ DSDYFCR+FRRQFGLTPGEY ARFQ Sbjct: 241 ILQKYHLSVNEVAQRCGYEDSDYFCRLFRRQFGLTPGEYRARFQ 284 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 117/278 (42%), Gaps = 16/278 (5%) Query: 23 NPQLLGRVWFASQPASLPVG-SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 NP ++ + P+ P+ D L +V G ++ + L GE +F+ + Sbjct: 14 NPIYPVSLYEITCPSDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSG 73 Query: 82 AAN--LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHP--ARQIQLPSLQRGE----- 132 + V KP ++VF + D + P ++ ++P+ R E Sbjct: 74 ELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGM 133 Query: 133 -GEAMLTALTHLSR--SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHS---I 186 AML + + R + I+ L+ S+L S+ + + + Sbjct: 134 ELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTV 193 Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 +++ NYA+P+ + +A+ ++ ++ + F + T IEY+ R+ +A L++ Sbjct: 194 IEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTD 253 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 I EVA GF YF VFR++FG TP EY +R Q Sbjct: 254 AKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_B5XZ22 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XZ22_KLEP3 Length = 287 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 89/274 (32%), Positives = 141/274 (51%), Gaps = 3/274 (1%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEY-GNLLEAKQQRLV 71 L + +GRV+FA + S + +DFPRL+I+L G+ L L Sbjct: 5 INQLIDSFLKKQNGIGRVYFAGEMRSPAEPVVQVDFPRLNIILNGQLPDRALGENASPLE 64 Query: 72 EGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRG 131 ++L+IP + N P P +LLS++F L S + + Q Sbjct: 65 ANDVLYIPGDSWNCPQWQAPCLLLSILFDKQRLECSLQHWN-GKAITVVEKRQALRRGPR 123 Query: 132 EGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQ 191 G +L AL L P EQ + +V+SLL C ++ S R L+ +I ++ Sbjct: 124 VGSFLLQALNELRMQPQEQRTARSIVVSLLSHCHDLLGSQAQTS-SRSQALFEAIRQYMD 182 Query: 192 DNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHE 251 +YA+PL+RESVAQ F ++PN+LS LF + G M F EY+ +R+ +ARM+L+ + + + + Sbjct: 183 AHYAEPLSRESVAQAFYLSPNYLSHLFQKCGPMGFNEYLNHIRLEQARMLLKGHDMKVKD 242 Query: 252 VAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 +A CGF DS+YFCR+FR+ +P EY ++ Sbjct: 243 IAHACGFADSNYFCRLFRKTTERSPSEYRRQYHS 276 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 13/272 (4%) Query: 24 PQLLGRVWFASQPASL-PVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 ++ S PA V + + V +G ++ + GE + + Sbjct: 63 RDFPFNIYPCSIPADFRQVPVHWHEDMEIIAVKKGRGVVTVDMEPYEARAGEAVVVFPGQ 122 Query: 83 ANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHP--------ARQIQLPSLQRGE 132 + ++ + +++F P+ L + D T L P I G Sbjct: 123 LHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLPDYGA 182 Query: 133 GEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWV 190 + L L ++ Q ++ + L L + + + ++ Sbjct: 183 FMECIGILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRLLEYM 242 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 +++Y + +T E A+ + +H K F Q+ + FI+Y+ R+ KA +L + Sbjct: 243 EEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPDPVT 302 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 VAQRCGF + YF R+FRR++G TPGEY Sbjct: 303 AVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 9/277 (3%) Query: 8 ADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQ 67 A + F+ L L + DF + V G +LE K+ Sbjct: 2 AHEHFYVKRSERESLVQPELIYTGLLEDAPNWFNIQHSHDFCEILYVAGGAGEAILEGKK 61 Query: 68 QRLVEGEMLFIPARAANLPVNNK--PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL 125 RL G+++ + + ++ P+ L+ L + L ++ Sbjct: 62 FRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIR----DFAVPGLPAGCLSQEKYRVLS 117 Query: 126 PSLQRGEGEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLY 183 R + + L L S+ Q I Q LV +LL L ++ + P + Sbjct: 118 CGEYRYKMDIYLRELLQETSSQIEFYQEISQGLVSALLVLVMRLIRINPEDEAALSQE-C 176 Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 I ++ N+ P+T +S+++ I+ ++LS LF + + I+Y+ RM KA +L Sbjct: 177 QKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVSPIKYLTSKRMEKACELLS 236 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + L + EV++ G+ + YF +VF+R +G++P +Y Sbjct: 237 ETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 107/291 (36%), Gaps = 16/291 (5%) Query: 9 DQQFFADLFSGLV--LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAK 66 DQ F L V G W+ P + V S + V+ GE ++++ Sbjct: 2 DQSFRQSLKESTVHGNERFPFGAYWYQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQIDSE 61 Query: 67 QQRLVEGEMLFIPARAANL--PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ 124 + GE +FI + N+ ++VF L S YD ++ P ++ + Sbjct: 62 YIPVRAGEAIFIDGGDLHTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERR 121 Query: 125 LPSLQR---GEGEAMLTALTHL-----SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQ 176 +R G E +L + + + + I+ + +L S + + Sbjct: 122 AAFPRRMTSGTDERLLEHIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRS 181 Query: 177 PRGD----FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRW 232 D + ++Q +Y +P+ +A ++ + F ++Y+ Sbjct: 182 EAADMTRTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNS 241 Query: 233 VRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 R+ +A +L+ I ++A GF YF RVFR+ TP EY + Sbjct: 242 YRVRQAAELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 10/265 (3%) Query: 27 LGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP 86 + R+ ++ S VG+ F + + GE + ++ + +G+++ +P+ + Sbjct: 11 IKRIKRSNTSCSTGVGAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRT 70 Query: 87 VNNKPVMLLSLVFA-----PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT 141 N M +V + W+ + + P + +P +R A+L L Sbjct: 71 TYNGKGMHERIVISFRNEATEWIQNQTGKELMENCMKP-GVVNIPEKRRDYVVALLDKLI 129 Query: 142 HLSRSPLEQN---IIQPLVLSLLHLCR-SVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP 197 + SP E + I L+ LL + R + + + ++ ++YA Sbjct: 130 FENDSPDELSPAFIKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADN 189 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 L+ E VA FN++ ++LSK F F EY+ VR+ A +L + + SI ++A CG Sbjct: 190 LSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECG 249 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSAR 282 F DS+YF FR+ G++P +Y Sbjct: 250 FNDSNYFGDAFRKAKGISPHKYRKN 274 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 110/258 (42%), Gaps = 9/258 (3%) Query: 23 NPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 P R+ + V S +F + + +G +++E Q L E + P Sbjct: 13 RPFASERIAGVNDNM---VRSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFV 69 Query: 83 AN--LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL 140 + N+ P L L F P + +L AR +LP Q ++ + Sbjct: 70 MHHSFEENDVPFRRLLLYFNPEVIRSPQI---LRTLSERARVYKLPRAQSAPIYNLMKDI 126 Query: 141 THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTR 200 + + + + L + L +V ++P I N++ +++ + +T Sbjct: 127 LQE-QERDDLYSRELITLMVNALALQLVRNSDEAARPEQRNRVTDIINYLHEHFTEDITL 185 Query: 201 ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPD 260 E +A F ++ HL + F ++ + ++Y+ +R+ A+ +LQ+ SI E+++R GF + Sbjct: 186 EQLANHFYVSQYHLCREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSN 245 Query: 261 SDYFCRVFRRQFGLTPGE 278 +F RV++ G++P + Sbjct: 246 VTHFNRVYKSVTGMSPSQ 263 >UniRef50_Q7MFY0 AraC-type DNA-binding domain-containing protein n=58 Tax=Gammaproteobacteria RepID=Q7MFY0_VIBVY Length = 301 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 95/277 (34%), Positives = 159/277 (57%), Gaps = 6/277 (2%) Query: 10 QQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAK--- 66 + F DL S ++ + +WFA + P S ++FPRL++VL GEY N +E+ Sbjct: 22 EMMFDDLISSVLNERESFHHIWFAGDFHTPPEFSYQVNFPRLELVLDGEYINEMESHDRK 81 Query: 67 --QQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSL-LHPARQI 123 + G+ +FIP+ N P + +LS++F LGLS R + + ++ Sbjct: 82 VSKIVAKAGDAIFIPSNCWNKPNWDTDCSVLSMLFGRRQLGLSLVSKRKGEVNFYDIQKH 141 Query: 124 QLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLY 183 + + + +L AL+ L+R ++ + + L+ +LL ++++N P S R LY Sbjct: 142 SIQTRSGFAIDNILEALSSLARENHKKPMDELLLQALLQYAKTMLNAPVEQSHNRVQDLY 201 Query: 184 HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ 243 IC ++Q+N+ +P+TRES+A F+I+ NHLS+LF Q G M +Y+ WVR+ +A+ +L+ Sbjct: 202 QGICIYIQENFHRPITRESIASRFSISANHLSRLFRQQGHMTLADYITWVRVDRAKFMLK 261 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 KY+ ++EVA RCGF D +YFCRVF+ + G TP +Y Sbjct: 262 KYNFKLNEVALRCGFKDVNYFCRVFKNRTGRTPTDYR 298 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 7/246 (2%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL--PVNNKPVMLLSLVFA 100 + + +L G+ + L G+M IP + + + F+ Sbjct: 35 PHYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIYFS 94 Query: 101 PTWLGLSFYDSRTTSLLHPARQIQ--LPSLQRGEGEAMLTALTHLSRSPLEQNIIQP--- 155 + + H Q + +PS R + E +L + + IQ Sbjct: 95 RDTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCSL 154 Query: 156 LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 L L+ L R G++ + ++ +Y + +T VA F N++P + S Sbjct: 155 LHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPTYFS 214 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 K F + F EY+ ++R+ KA +L+ LS+ VA CGF D +YF VFRR G++ Sbjct: 215 KKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGVS 274 Query: 276 PGEYSA 281 P EY Sbjct: 275 PREYRK 280 >UniRef50_P32677 Uncharacterized HTH-type transcriptional regulator yijO n=33 Tax=Gammaproteobacteria RepID=YIJO_ECOLI Length = 283 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 92/270 (34%), Positives = 139/270 (51%), Gaps = 4/270 (1%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 L S L+ P L +++FAS +P + +DFPRL+IVL GE+ + LV G++ Sbjct: 8 LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDT--GAGATLVPGDV 65 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 L++PA N P P S++F LG S + + G Sbjct: 66 LYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQY-QNLAKQHVARRGPRIGSF 124 Query: 136 MLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 +L L + P EQ + +V SLL CR ++ + R L+ +I +++ + YA Sbjct: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLL-GSQIQTASRSQALFEAIRDYIDERYA 183 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 LTRESVAQ F I+PN+LS LF + G + F EY+ R+ A+ +L+ Y L + EVA Sbjct: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 CGF DS+YFCR+FR+ +P EY ++ Sbjct: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 108/269 (40%), Gaps = 14/269 (5%) Query: 30 VWFASQPASLPV-GSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN 88 + A QP + G D + ++ GE ++ + R+ G+++ IP + Sbjct: 16 IEAAKQPGRFSMDGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSP 75 Query: 89 NK----PVMLLSLVFAPTWLGLSFY--DSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 + P + + F + + L ++L + ++ + +L + Sbjct: 76 SGKLSQPHERILVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLA 135 Query: 143 LSRSP--LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD-----FLYHSICNWVQDNYA 195 + + Q L+ LL + N P + G + ++ +Y Sbjct: 136 EQKQQAGGYEEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYD 195 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 + L+ +A F+++P +LS LF + + + Y+ VR+ +A +L++ L + E+A R Sbjct: 196 ENLSLSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYR 255 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 G+ +F RVF++ ++P Y + Sbjct: 256 VGYQSGTHFGRVFKKAKAVSPQSYRREQR 284 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 213 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 116/277 (41%), Gaps = 7/277 (2%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVG-SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGE 74 + L+ + ++ FA + A + + + +L G L+ LV G+ Sbjct: 1 MEEILLSDKIKDYKIDFAERDADFHMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGD 60 Query: 75 MLFIPARAANLPVNN--KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQ--IQLPSLQR 130 + IP A + V + V +L F + F+ L H + L SL + Sbjct: 61 FVLIPQSAMHRFVYDCNSTVKRYNLFFTMDFAASLFHSDTKDILEHLFHYPVLHLTSLLQ 120 Query: 131 GEGEAMLTALTHLS--RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICN 188 G + L + + Q +I + +L L + + + Sbjct: 121 GNATRLFDTLYQETVGQDSCSQAVIPAYISLILSLLVRNRDHIQLQDLDSAENAIQASAR 180 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++ ++ +P++ VA + +++P + SK F Q + F EY+ R+ +A +L L+ Sbjct: 181 YISTHFQEPVSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLN 240 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 + E+A RCGF D +YF FR++FGL+P +Y R + Sbjct: 241 VTEIAIRCGFNDGNYFGDAFRKEFGLSPLQYRKRQKN 277 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 94/252 (37%), Gaps = 14/252 (5%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLVFA 100 + L V +G + G++ + + + +++F Sbjct: 36 LHWHESMELVFVKQGMGLVQVGVVTYPAYRGDIFIFAPGTLHALRQAEGQRMEYENIIFE 95 Query: 101 PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM--------LTALTHLSRS--PLEQ 150 P LG + D L P + +L R + L L +R+ P + Sbjct: 96 PELLGGAE-DLCAEKYLLPLQSGRLSLPVRLTPNDLCYLQAAACLRELEDANRAKRPGYE 154 Query: 151 NIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNIT 210 +++ +L L L + ++ ++ W+ +YA+PL A + + Sbjct: 155 LLVKGALLRFLALLIAQGRQCLS-TETADTQRLKTVLQWLSAHYAEPLRVADAAGVCSFS 213 Query: 211 PNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRR 270 +H + F Q FI ++ R+ A L+ ++ +A RCGF + YF R F+ Sbjct: 214 ASHFMRWFRQMTGQSFIAFLNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNRAFKA 273 Query: 271 QFGLTPGEYSAR 282 FG+TP +Y + Sbjct: 274 HFGMTPRDYRKK 285 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 104/280 (37%), Gaps = 16/280 (5%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 + ++ +P L V+ + + + L V GE + + G+MLF Sbjct: 8 NTVMTDPALPINVFHPTFGIGCSLPLHWHEHFELIYVESGEVLYTIGGQPFPTKPGDMLF 67 Query: 78 IPARAANLPVN---NKPVMLLSLVFAPTWLGLSFYD--SRTTSLLHPARQIQLPSLQRGE 132 + + + + N+P + +LVF P+ LGL + I Q Sbjct: 68 VNSGELHSAASLNPNEPFTVYALVFNPSILGLKEPHIVDLVAPYTNGMSMIASRIEQTDS 127 Query: 133 GEAMLTAL------THLSRSPLEQNIIQPLVLSLLHLCRS-----VVNMPPGNSQPRGDF 181 +L + + ++ L + N+ Sbjct: 128 LYPLLKQTTLRLAGEFEQKPRGYELAVRSYCQLLFTWLSREFTVMQRSDTEMNAFRARTN 187 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 + + ++ + A+ +T E A F +++P H ++F + F++Y+ R+ +A + Sbjct: 188 RFKELLTRLESDVAERVTVEQAASFVHMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYL 247 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 L+ +S+ ++A G + F ++FR+ G++P + Sbjct: 248 LKNTAMSVTDIAAEIGCSSINSFSKLFRQLRGVSPRDLRK 287 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 103/281 (36%), Gaps = 17/281 (6%) Query: 22 LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 Q G W+ P + D L GE ++ + GE +FI Sbjct: 17 NERQPFGTYWYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGAGEAVFIDGG 76 Query: 82 AANLPVNNKP--VMLLSLVFAPTWLGLSFYDSRTTSLLHPA--RQIQLPSLQRGEGEAML 137 + + SLVF L + YD+ +L+ P R+ P R E A L Sbjct: 77 DIHAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRETAADL 136 Query: 138 TALTHLS--------RSPLEQNIIQPLVLSLLHLCRSV-----VNMPPGNSQPRGDFLYH 184 + L H+ SP + ++ + +L + + S+ Sbjct: 137 SLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKIDRLK 196 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 ++ +Q NY+ P+ +A ++ + F ++Y+ R+ +A +L++ Sbjct: 197 TVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAELLRE 256 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 I ++A GF + YF RVFR+ +P E+ R Q Sbjct: 257 PERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQA 297 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 97/268 (36%), Gaps = 3/268 (1%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 S L V A+ F L V +G +E KQ + + +++ Sbjct: 11 SDSDFLKAQLLYVTCATSDKDWHSMEHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLIL 70 Query: 78 IPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAML 137 I + NK + + + + + ++ Sbjct: 71 INPNIPHTEFGNKEQPWEYIALGIEGVQFQYSEKEAPYSYSVFSLSREHREIPWYLSTLV 130 Query: 138 TALTHLSRSPLEQNIIQPLV-LSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 + ++ Q I Q L+ L LL + RS + + + ++ ++Y + Sbjct: 131 KEIQ--TQQEGYQTICQNLLELILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHE 188 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 +T ++++ +I +L F + + I Y+ R+ +AR +L+ + S+ ++ + Sbjct: 189 DITLDTLSALVHINKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEIS 248 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 GF YF + FRR G TP Y + + Sbjct: 249 GFSSQSYFSQTFRRLTGTTPNAYRKKKK 276 >UniRef50_C3SIM7 Membrane protein n=86 Tax=Enterobacteriaceae RepID=C3SIM7_ECOLX Length = 283 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 91/270 (33%), Positives = 138/270 (51%), Gaps = 4/270 (1%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 L S L+ P L +++FAS +P + +DFPRL+IVL GE+ + LV G++ Sbjct: 8 LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDT--GAGATLVPGDV 65 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 L++ A N P P S++F LG S + + G Sbjct: 66 LYVAAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQY-QNLAKQHVARRGPRIGSF 124 Query: 136 MLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 +L L + P EQ + +V SLL CR ++ + R L+ +I +++ + YA Sbjct: 125 LLQTLNEMQMQPQEQQTARLIVASLLSHCRDLL-GSQIQTASRSQALFEAIRDYIDERYA 183 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 LTRESVAQ F I+PN+LS LF + G + F EY+ R+ A+ +L+ Y L + EVA Sbjct: 184 SALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHA 243 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 CGF DS+YFCR+FR+ +P EY ++ Sbjct: 244 CGFVDSNYFCRLFRKNTERSPSEYRRQYHS 273 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 12/277 (4%) Query: 12 FFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLV 71 + G P V + + L ++ G + + + V Sbjct: 6 YKEIKHHGTADFPAGYYHVT--ESHPQYAMPYHWHEELELIHIISGTFHVTINETTRNAV 63 Query: 72 EGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQI---QLPSL 128 G++L + + + + LVF + L Y S + L I P+ Sbjct: 64 PGDILLVNSGGLHGGTP-YDCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAG 122 Query: 129 QRGEGEAMLTALTHLSRSPLE------QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL 182 ++L L L + E ++ + LL R + S R +L Sbjct: 123 DDTAIHSLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYL 182 Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 ++ N+++ +Y + +T +A+ ++ + F++ I+YV + R+ +A +L Sbjct: 183 LKNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLL 242 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 SI ++A CGF D YF R F++ G++PG+Y Sbjct: 243 AGIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQY 279 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 109/270 (40%), Gaps = 11/270 (4%) Query: 21 VLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 V + +++ LP D + + +G ++ K+ L + LF+ Sbjct: 17 VFPINVYEKIFVHENNTLLP---HWHDEFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNC 73 Query: 81 RAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL 140 + + ++VF+ + L D + L + +L E E + Sbjct: 74 GSIHGGKAEDNPEPYAIVFSLSMLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELI 133 Query: 141 THL-----SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSI---CNWVQD 192 +++ + + +++ + + + + + ++ D I +++ Sbjct: 134 SNIITVWKEKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINS 193 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 NY+ + + +A+ N++ + +LF + + ++Y+ R+ KA +++ +LSI E+ Sbjct: 194 NYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEI 253 Query: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 A GF + YF +VF+ G+TP +Y Sbjct: 254 AFEVGFNNVSYFIKVFKEYVGVTPFKYKKN 283 >UniRef50_C4L9U6 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9U6_TOLAT Length = 284 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 98/280 (35%), Positives = 159/280 (56%), Gaps = 9/280 (3%) Query: 10 QQFFADLFSGLVLNP--QLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLL---- 63 QQ F D+FS + + ++ +A P + + FPRL+ VL G Y N+L Sbjct: 2 QQVFQDIFSVITEEELSEHTHQLVYAHDTCPPPQYAFQVTFPRLEWVLSGNYQNILCDSQ 61 Query: 64 -EAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSF-YDSRTTSLLHPAR 121 + +QRL G+ LF+PA N PV + V +LSL+F LGLS S+ + Sbjct: 62 GDKIEQRLTTGQFLFVPANCWNKPVWQEDVCVLSLLFGRRQLGLSLVSWSQQQQNFIDVQ 121 Query: 122 QIQLPSLQRGEGEAMLTALTHLSRSPLEQ-NIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 + P + +ML AL L S L+ +Q ++++L + +++ P R Sbjct: 122 KHSYPLSAKSPVHSMLQALIDLQASELQTPRSLQLQLMTVLTFTQELLHQPQPEKYQRAQ 181 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 ++ IC +VQ+N+ + ++RE+VA+ FNI+PNHLS+LF Q G M F +Y+ +VR+ +A+ Sbjct: 182 SVFQRICIYVQENFHKAISRETVARRFNISPNHLSRLFRQQGHMNFADYMVYVRIDRAKF 241 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 +L++Y + + E+A RCGF D++YFCRVF+++ G TP EY Sbjct: 242 MLRRYPMHLEEIAHRCGFRDTNYFCRVFKKKTGRTPTEYR 281 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 101/277 (36%), Gaps = 15/277 (5%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 G P RV + + + V G + L+ R+ G Sbjct: 12 HGTREFPYACYRVT--ENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDAGCCSL 69 Query: 78 IPARAANLPVNNKPVMLLSLVFAPT-WLGLSFYDSRTTSLLHPARQIQLP-----SLQRG 131 I + + LVF L S + + + + S Sbjct: 70 IIGGSMHGGTPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSEPAK 129 Query: 132 EGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLC----RSVVNMPPGNSQPRGDFLYHSIC 187 + +A++ A+ L + P + + +L +L + S + + ++ Sbjct: 130 DAKAVIDAM--LEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVI 187 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 ++++ NY + +T E +A + N+ + F ++ +EY+ + R+ A ++ Sbjct: 188 SYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDE 247 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY-SARF 283 + ++A +CGF D YF +VF+ G+TP +Y F Sbjct: 248 KLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRRSF 284 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 99/251 (39%), Gaps = 8/251 (3%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN-KPVMLLSLVF 99 V + + + RG ++ + +L EGE LF+ + + + + K + ++VF Sbjct: 36 VNPHWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVNSGSIHSGLEMIKRSIGYAIVF 95 Query: 100 APTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL-----SRSPLEQNIIQ 154 L D P + E + + + +S + I+ Sbjct: 96 DLRLLYSEEPDYCKHEYFLPLINKRYHIPSNLNDEHIRNDICRIIEVFKEKSYGYELYIK 155 Query: 155 PLVLSLLHLCRSVVNMPPGNSQP--RGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 L+ + + N++ NY + L+ + +++ +++ Sbjct: 156 SLLFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKF 215 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 +L +LF + M +EY+ VR+ KA +L +S+ E+A CGF + YF +VF++ Sbjct: 216 YLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYM 275 Query: 273 GLTPGEYSARF 283 TP ++ + Sbjct: 276 HTTPLKFRKQN 286 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 99/265 (37%), Gaps = 8/265 (3%) Query: 23 NPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 L + + + L L GE L + + +M+ + + Sbjct: 16 ESFRLLYISKSRFGGDWNSTTHTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQV 75 Query: 83 ANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 + ++ L +V + F + T + R+ + + L Sbjct: 76 EHTELSLNASPLEYIVLGVASMEFLFSKADTNYAIFNCRENR-----ERMVTLLHMLLAE 130 Query: 143 LSRSPL-EQNIIQPLVLSLLHLCRS--VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 RS + + Q L+ LL +++ + P + I ++ NY + ++ Sbjct: 131 ADRSLDGCETVCQDLLEVLLIWLVRCTTISLQLEEAAPTENRECAEIKRYLDTNYREDIS 190 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 + +A+ ++ +L+ F + + I Y+ R+ +++ +L S+ ++++ GF Sbjct: 191 LDLLAELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFS 250 Query: 260 DSDYFCRVFRRQFGLTPGEYSARFQ 284 YF + FR+ G+TP EY + + Sbjct: 251 SPSYFSQCFRKAEGMTPNEYRRQTR 275 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 118/275 (42%), Gaps = 17/275 (6%) Query: 22 LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 L+ + R+ + S A D L +L GE ++ + R+ G+++F+ Sbjct: 16 LSMEYDRRIGYFSMSAD-----HLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRN 70 Query: 82 AANLPVNNK--PVMLLSLVFAPTWLGLSFYDSRTTSLLHPAR-----QIQLPSLQRGEGE 134 A + +++ L L P L ++LPS E Sbjct: 71 AVHKTLDSGRPDHDRLVLYINPELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVE 130 Query: 135 AMLTALTHLSRSPLEQNIIQPL-----VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNW 189 M+ + + P + +L + R + + +++P ++ + Sbjct: 131 RMVGDMVNEMIHPQAGSSWLLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRY 190 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 + DNY Q LT VA+ F I+P++LS+LF Q F +Y+ +R+ +A+ +L++ SI Sbjct: 191 LNDNYRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSI 250 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ++A R GF + +F ++F+R L+P Y +++ Sbjct: 251 TDIAWRSGFSNFSHFGKMFKRTVQLSPRAYRQQYR 285 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 120/282 (42%), Gaps = 16/282 (5%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 +L + NP ++ + + DF + V G + +E + + Sbjct: 5 IIELSGDIFFNPD--FDIFINREVEGFCLSQHTHDFIEISYVEEGSGYHYVEDQLIPIKR 62 Query: 73 GEMLFIPARAANLPVN---NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPS-- 127 G++ IP +++ + +++ + +F L ++ LH PS Sbjct: 63 GDLFVIPIGTSHVFRPSSQDNQLVIYNCIFRTCLLEQLKSVICESTKLHSLLYGSSPSAK 122 Query: 128 --LQRGEGEAMLTAL-----THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 + + + L+ + +L + P + ++ ++ +L + + S P + Sbjct: 123 WLQYQDKFDKFLSIMHGMFREYLKKGPRYEFLMMGQLIQVLAMLQRYECDGSMVSTPTNN 182 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 ++ D++A LT + VA+ ++P+H +LF + + F+++++ +R+ + Sbjct: 183 --MDDAIQYINDHFATNLTVQQVAERSFMSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCE 240 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 +L+ +SI E A + G+ D +F +FR++ G+TP EY Sbjct: 241 LLKSTEISIQEAANQVGYQDMKFFHSLFRKKTGVTPREYRRS 282 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 102/253 (40%), Gaps = 13/253 (5%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VNNKPVMLLSLV 98 V D + ++ +G ++ + G+++F+ + +N+ + +++ Sbjct: 41 VNLHWHDEVEIIVIKKGSGIVSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIMEYENIL 100 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQIQLP-----SLQRGEGEAMLTALTHLSRSP------ 147 F + L S YD + P L + Q ++TA+ + Sbjct: 101 FKSSLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYA 160 Query: 148 LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 + +I L L L + + +I +++ +N+ + + E +A + Sbjct: 161 YQLSIKAHLFQILYTLVSNCGQNKIKPINQKSLKKIKTILSYIANNFQENIAIEDIANYC 220 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 + ++ K F + + FI+Y+ R+ A +L +I ++A GF + YF R Sbjct: 221 FYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRC 280 Query: 268 FRRQFGLTPGEYS 280 F++++G++P +Y Sbjct: 281 FKKKYGVSPRKYR 293 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 105/267 (39%), Gaps = 10/267 (3%) Query: 28 GRVWFASQPASLPVG-SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP 86 ++ + +S + + + +L G+ ++ L G+ + IP + Sbjct: 21 IQISRIRRSSSYVMKRPHYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRA 80 Query: 87 VNNKPV--MLLSLVFAPTW---LGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT 141 + + + + F S + R I +P R E +L+ L+ Sbjct: 81 LYEEGLQAERYDMYFTKEEADAFHASCGREGFERVFLNPR-IAIPQPLRPGIEGLLSHLS 139 Query: 142 HLS--RSPLEQNIIQPLVLSLLHLC-RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPL 198 H + Q L+ +L L R +S + ++ Y + L Sbjct: 140 HENGQEDAYSHVQQQSLLFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHL 199 Query: 199 TRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGF 258 T +++A N++P + S+ F F EYV ++R+ KA +L+ ++ +A CGF Sbjct: 200 TLDAMAAMSNMSPTYFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGF 259 Query: 259 PDSDYFCRVFRRQFGLTPGEYSARFQG 285 D +YF VF++ GL+P EY +G Sbjct: 260 SDGNYFGDVFKKLTGLSPREYRNGIRG 286 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 97/262 (37%), Gaps = 8/262 (3%) Query: 28 GRVWFASQPASLPV-GSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL- 85 + + + S + G + + G+++F+ + Sbjct: 3 YNISRTKRSYEFHMAESHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRT 62 Query: 86 -PVNNKPVMLLSLVFAPTWLGL--SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 ++ +++ F +L + ++ +P+ R E ++ + + Sbjct: 63 TYHSSPVNERVTISFDGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEY 122 Query: 143 LS--RSPLEQNIIQPLVLSLL-HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 + + + LL L R G+ + ++ D+Y P+T Sbjct: 123 EETGQDGFSPLMKKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPIT 182 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 E VA+ +++P + S+ F + EY+ +R+ +A +L S+ E+A RCGF Sbjct: 183 LEEVAELSHMSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFG 242 Query: 260 DSDYFCRVFRRQFGLTPGEYSA 281 D +YF FR+ G++P + Sbjct: 243 DGNYFGDAFRKAKGVSPRAFRK 264 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 111/278 (39%), Gaps = 16/278 (5%) Query: 22 LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 +P + + P G C +F + I+ G+ ++ LV G+ I Sbjct: 14 FHPDGFP-IVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVTGDTFVIGGD 72 Query: 82 AANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA--------RQIQLPSLQRGEG 133 + +N + L++++F P L LS D ++ S H ++ Q S + Sbjct: 73 RPHDYLNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRHQFTSRLQLNP 132 Query: 134 EAMLTAL-------THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSI 186 ++ L L + + L + L S + N + + Sbjct: 133 AELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCYIRTRNPESKKLLRIAEA 192 Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 + +Q ++ +P++ + + + ++ + + F I+Y+ VR+ +A +L+ Sbjct: 193 ISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQEASRLLRSTD 252 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 SI ++A GF DS+YF R FR GL+P EY + + Sbjct: 253 RSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 105/282 (37%), Gaps = 11/282 (3%) Query: 11 QFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 F P + + ++ + + + VL G + +L Sbjct: 2 SVFDPKLQKEPYYP--VVKFYYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEGSYQL 59 Query: 71 VEGEMLFIPARAANLPVNNKPVMLLSLVFA--------PTWLGLSFYDSRTTSLLHPARQ 122 +G+++F+ A + + ++ + ++ F+ P + L + ++++ Sbjct: 60 KKGQIIFLDAGTRHRLIVSERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQAS 119 Query: 123 IQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL 182 L + + + + + + + + L+LS +L R ++P Sbjct: 120 QLLLHDTDDTYQCLRRLILEVDKKSEQTDFMVQLLLS-EYLIRIAELAEAKVAEPDQQAY 178 Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 ++ NY + ++ +A ++ P +L ++F E++ R+ KA+ +L Sbjct: 179 VKRALAYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAML 238 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ++ +SI ++ G YF F++ TP EY R Q Sbjct: 239 KQTDISITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 12/248 (4%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVML----LSLVF 99 D L + GE L+ R+V G ++ IP + + +L F Sbjct: 26 HSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQRTALRF 85 Query: 100 AP---TWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI--IQ 154 + WL + L A I++P ++ E ++T + + ++ P E ++ ++ Sbjct: 86 SIKDTDWLCSALGKDFVKDNLT-AGIIEVPDKRKEYIENLITRMIYENQMPDELSMGMVK 144 Query: 155 PLVLSLLHLCRS--VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 L + + + + + +V +NY + + + VA+ F+I+ + Sbjct: 145 TLFQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNNYDKQIYLDDVAKQFSISRS 204 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 +LSK F Q F EY+ VR+ +A +L + + SI ++A CGF DS+YF FRR Sbjct: 205 YLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDAFRRIK 264 Query: 273 GLTPGEYS 280 G++P +Y Sbjct: 265 GISPNKYR 272 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 103/265 (38%), Gaps = 8/265 (3%) Query: 23 NPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 L + + L L GE LL + + +M+ + + Sbjct: 47 ESFRLLYISKSRFGGDWNSTVHTHSCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQV 106 Query: 83 ANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 + ++ L +V + + + F + +T + R+ + + L Sbjct: 107 EHTELSLNASPLEYIVLGVSGIEILFGKADSTYAIFNCRENR-----ERMVTLLHMLLAE 161 Query: 143 LSRSPL-EQNIIQPLVLSLLHLCRS--VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 RS + + Q L+ LL +++ S + I ++ +NY + ++ Sbjct: 162 ADRSLDGCETVCQDLLEVLLIWLVRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEIS 221 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 +++A+ +I +L+ F + + I Y+ R+ +++ +L S+ ++++ GF Sbjct: 222 LDTLAEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFS 281 Query: 260 DSDYFCRVFRRQFGLTPGEYSARFQ 284 YF + FR+ GLTP EY + + Sbjct: 282 SPSYFSQCFRKAEGLTPNEYRRQVR 306 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 13/264 (4%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN----- 84 ++ S +G +F + V G + + + + G + FIP ++ Sbjct: 22 LYVNRAYESFDMGEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSHVFRPK 81 Query: 85 LPVNNKPVMLLSLVFAPTWL-----GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA 139 P ++P+++ + + ++L G + GE AM Sbjct: 82 TPKKDRPLIVYNCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGEYHAMFRE 141 Query: 140 LTHL--SRSPLEQNIIQPLVLSLLH-LCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 L ++ P ++ LV+ +L L R + + ++ NYA Sbjct: 142 LYQEFAAKPPAYMAVLASLVMRILTGLYRHKLQIIAPAGDRPQWLSVDEAIAFIDRNYAS 201 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 L +A ++ S+LF +H M IEYV+ +RM A +L H S+ ++A Sbjct: 202 ELKLGELAAQAKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSVEDIAGAV 261 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYS 280 G+ D +F R+F+++ G+TP +Y Sbjct: 262 GYADMKFFYRLFKKKTGVTPRQYR 285 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 118/268 (44%), Gaps = 17/268 (6%) Query: 33 ASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPV 92 S P + DF L +V G ++LE + + G++ + R + + + Sbjct: 31 ESHPHDVTEIEHWHDFCELAMVTGGRGVHVLEGESFHVSTGDVFVLQGRQVHCFRERQGL 90 Query: 93 MLLSLVFAPT--------------WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLT 138 L+++++ P + L + S + +++L + G EA++ Sbjct: 91 ALINVMYDPERLPLPLGLLRRLPGYSALFMLEPTFRSTHRFSSRLRLARRELGSAEAIVE 150 Query: 139 ALTHLSRSPLE--QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 + + S++ E + ++ L++ L+ L + + + ++ + + Sbjct: 151 RIENESKAAQEGHEAVLLSLLVELMVLLSRHYAQ-SDTRESHALLQVGQLVSMLEQRFGE 209 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 P T E +A+ ++ ++L ++F Q I+++ +R+ AR +L++ L + E+A C Sbjct: 210 PWTLEQLAEQARVSRSNLLRMFRQATGQSPIDFLIGLRIEAARRLLRRSDLGMTEIALEC 269 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 GF D ++F R FR+ G+TP Y + + Sbjct: 270 GFSDGNFFPRQFRKTCGVTPSIYRRQMR 297 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 119/293 (40%), Gaps = 27/293 (9%) Query: 12 FFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLV 71 +F L P + ++ + + + C D+ ++ V +G + + ++ + + Sbjct: 20 YFNSKMEMLEGLPCKMYKLTY-----QQSLWTHCHDYFQIWYVAKGAFLHTVQQQVYEIR 74 Query: 72 EGEMLFIPARAANL--PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQ 129 +G++ IP + ++ + + F P+++ F + T ++ + Sbjct: 75 KGDIFVIPPFTLHSVSISPDEDIEIYGCEFMPSFVNERFQEQPTDHAFFDVAFLEYFLRK 134 Query: 130 RGEGEAMLTA----------------LTHLSRSPLEQNIIQPLVLSLLHLCRSVVN---- 169 ++ +T + + R+P Q ++ +L LL + VN Sbjct: 135 EMNAQSQITLDSVTDVTVRNVLKDMLIEYERRTPFFQISLKAKLLVLLSILARQVNGELL 194 Query: 170 MPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEY 229 + + + + + ++Y + + + N++ + LF + F Y Sbjct: 195 REGFEKSEKYREIMTRVVDHIHNHYQEDMNLNDLCSLSNLSRSTFCILFKEWTGKTFNRY 254 Query: 230 VRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + +R+ +A M+L++ LS+ +V GF + YFCR+F++ G++P ++ + Sbjct: 255 LTDLRILQAMMMLKQPELSVTDVCYSTGFNELSYFCRIFKKYTGISPTDFRKQ 307 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 102/255 (40%), Gaps = 14/255 (5%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLV 98 + + GE + K + GE LFIP+ + PV++KP L + V Sbjct: 33 IHCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEGLFIPSGHLHGAYPVSDKPFSLYATV 92 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE-----GEAMLTALTHLSRSPLEQNII 153 P ++ YD + + P + + + MLT L ++ Sbjct: 93 VHPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCPTHYWMSDMLTMLQATISQFQQKEEG 152 Query: 154 QPLVL--SLLHLCRSVVNMPPGNSQPRGD-----FLYHSICNWVQDNYAQPLTRESVAQF 206 LV+ +LL + +V P + + + ++ ++Y + LT + +A Sbjct: 153 YELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIRQIKKVLQFIDEHYDEKLTIKQLANL 212 Query: 207 FNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCR 266 ++ H S+ F M +EY+ R+ KA +L++ +I +++ GF YF + Sbjct: 213 VQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLLRETDRTIMDISMSVGFDHPSYFIK 272 Query: 267 VFRRQFGLTPGEYSA 281 +F+R TP E+ Sbjct: 273 LFKRHKRCTPSEFRR 287 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 105/282 (37%), Gaps = 12/282 (4%) Query: 11 QFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 + + G NP + + A + +PV D + V G + + Sbjct: 17 ELKENKPHGTKDNPFSIYHIENAGRSFQIPV--HWHDEFEIIYVKSGLLTVSISGESYIG 74 Query: 71 VEGEMLFIPARAANLPVNNKPVM-LLSLVFAPTWLGLSFYDSRTTSLLHPAR--QIQLPS 127 G+ + +L + + + +F ++ D LL P + + Sbjct: 75 KAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMINP 134 Query: 128 LQRGEGEAMLTALTHLS---RSPLEQNIIQPLV--LSLLHLCRSVVNMPPGNSQPRGDFL 182 + + + L + E I + + LL + Sbjct: 135 RVKDSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDTSGRN 194 Query: 183 Y--HSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 + +++Q N+ ++ + + F+++ ++S+ F +H + +Y+ ++R+ A+ Sbjct: 195 IVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAKQ 254 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 +LQ LS+ E A + G+ + YF R F++ +G++P +Y Sbjct: 255 LLQDTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRNS 296 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 99/246 (40%), Gaps = 6/246 (2%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPT 102 L+ + G L+ + +G+++FI + + + +++ ++F P+ Sbjct: 56 LHWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVMDVIMFEPS 115 Query: 103 WLGLSF-YDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSP--LEQNIIQPLVLS 159 L + +D + + S E +L + ++ ++I+ ++ Sbjct: 116 LLSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSDLIR 175 Query: 160 LLHLCRSVVNMPPGNSQP---RGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSK 216 L L ++ P +P RG + ++ + T + ++ +++P+ S Sbjct: 176 FLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYGWTLQELSDLTHLSPSRFSA 235 Query: 217 LFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 LF Q Y+ +R+ A +L+ I E+A+ CGF + F R+F++ G +P Sbjct: 236 LFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQHVGASP 295 Query: 277 GEYSAR 282 E R Sbjct: 296 SEIRER 301 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 101/284 (35%), Gaps = 24/284 (8%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 F N ++ ++ + D L + G L + R+ Sbjct: 10 FELPIETYTDNCEIFHSLY-----------NHWHDEMELIYIESGSGLVRLNKEILRVKA 58 Query: 73 GEMLFIPARAANLPVNNKPVMLL--SLVFAPTWLGLSFYDSRTTSLL--------HPARQ 122 G+++ + + + +L S+VF +L D ++ Sbjct: 59 GDLIIVNRGVLHGIKTDLKNILYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHI 118 Query: 123 IQLPSLQRGEGEAMLTALT--HLSRSPLEQNIIQPLVLSLLH-LCRSVVNMPPGNSQPRG 179 I G + + H + P ++ L S + + P + + Sbjct: 119 ISRSDDNYGNICLLFDRIHSCHKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDENKS 178 Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 I +++ NY+QPLT + N + + KLF Q+ I Y+ +R+ KA+ Sbjct: 179 LASIKKILDYINLNYSQPLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAK 238 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +L S+ E+A GF ++ YF + F++ G++P ++ Sbjct: 239 PMLLHSDSSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRNL 282 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 100/266 (37%), Gaps = 13/266 (4%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN-N 89 +A + V + + G + + L G+ +FI + A + Sbjct: 44 CYAEDLSCFSVAWHWHEEFEFILAALGPIHVDVNKTRLTLQTGQGVFINSGALHAVEPAE 103 Query: 90 KPVMLLSLVFAPTWLGL---SFYDSRTTSLLHPARQIQLPSL-----QRGEGEAMLTALT 141 +L S VF P +G F+ LL P QR + A Sbjct: 104 GRALLHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFFLLDEAVPWQRQVLLCLREAWK 163 Query: 142 HLSRSP--LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRG--DFLYHSICNWVQDNYAQP 197 ++ P E + L +L L V+ S+ + +V+++YA+ Sbjct: 164 GVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQEQIASERMKQMLRYVEEHYAEE 223 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 LT E +A ++ + + F Q + I+YV+ R+ KA +L+ L EV CG Sbjct: 224 LTVEKLAGCVALSESACLRSFRQFLGITPIQYVKQFRVEKAAELLRSTRLKTGEVGLECG 283 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSARF 283 F D+ YF + FR TP EY RF Sbjct: 284 FSDASYFIKTFREIKHCTPREYRIRF 309 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 110/272 (40%), Gaps = 12/272 (4%) Query: 23 NPQLLGRVWFASQPASLPV-GSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 +P ++ + + + +F + +L G + + +GE++ I Sbjct: 2 DPNQDLKITRIKRDPYFSMKDAHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEG 61 Query: 82 AANL--PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQ--IQLPSLQRGEGEAML 137 A + ++ + + F+ ++L F + ++L Q +++P +R E ++ Sbjct: 62 ALHRTTYISGGSHERICITFSKSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLI 121 Query: 138 TAL--THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNS-----QPRGDFLYHSICNWV 190 + + + + V L+ + ++ + D + ++ Sbjct: 122 SKAHREMMYQDTYSLYLASSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYI 181 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 NY P+T E A + N++ + SK F F EY+ +R+ +A +L L I Sbjct: 182 CSNYQSPVTLEETAAYCNMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPIT 241 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 E+A GF DS+YF VF+R G++P +Y Sbjct: 242 EIALLSGFNDSNYFGDVFKRMKGISPCKYRKN 273 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 98/277 (35%), Gaps = 1/277 (0%) Query: 9 DQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQ 68 + + G+ L + + F L V+ G+ +E Sbjct: 2 SNELINFEYKGVPDPDFKLRYISISKYEGDWQSHPHTHQFSELFYVISGKGVFYIENDTV 61 Query: 69 RLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSL 128 + +++ I + + +VF L F + + + Sbjct: 62 SVCADDLIIINPHIEHTEKTMSNDPMTYIVFGVEGLAFYFNSQNAANPKGYSYYNYGSAK 121 Query: 129 QRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLL-HLCRSVVNMPPGNSQPRGDFLYHSIC 187 + + +R P + I L+ LL ++ R ++ + Sbjct: 122 THFINFSQIMIKEFNARKPGFEAICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAK 181 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 ++ NYA+ +T + +A+ +I +LS F ++ I Y+ R+A ++ +L Sbjct: 182 KYIDANYAKNITLDLLAEITHINKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSR 241 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 SI EVA GF YF ++FR+ G++P +Y Q Sbjct: 242 SIAEVASSTGFSSQSYFSQIFRKNTGMSPLQYRKLKQ 278 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 107/273 (39%), Gaps = 9/273 (3%) Query: 15 DLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGE 74 + G+ P V + DF + IV G ++ + L G Sbjct: 13 TVLQGIDFFPSGAASVTIEPRLPQAAFPEHHHDFWEIVIVEHGTGTHVFNGQPYTLSGGS 72 Query: 75 MLFIPARAANLPVNNKPVMLLSLVFAP----TWLGLSFYDSRTTSLLHPARQIQLPSLQR 130 + F+ +L + + + L ++++ ++L H ++ Sbjct: 73 VCFVRDHDRHLYEHTENLCLTNVLYRSPQAFSFLSGLEKLLPQEQDGHYPSHWRVSQQTL 132 Query: 131 GEGEAMLTALTHLSR--SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICN 188 + ++ L L ++ L + LL L RS M G D + + Sbjct: 133 HQASPLVERLEALRECSDVHAVASMEMLFMQLLILLRSGSQMQGGGH---ADERLNQLIA 189 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 W++D+YA+ + E +A ++ L + Q + Y+ +R+ KAR +L+ S Sbjct: 190 WLEDHYAEEVCWEQLADKHMLSLRTLHRQLKQRTGLTPQRYLNRLRLMKARYLLRHSEES 249 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + ++A +CGF DS++F +FRR+F +P + Sbjct: 250 VTDIAYQCGFGDSNHFSTLFRREFSWSPRDIRQ 282 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 93/267 (34%), Gaps = 14/267 (5%) Query: 27 LGRVWFASQPASLP-VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL 85 ++ + P P V + V +G Q G++ +P + Sbjct: 103 PFNIYPCTIPGDFPSVALHWHKSMEIIFVKKGTGRIQTGRNMQEARSGDIFVMPPGTLHA 162 Query: 86 PVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSL--------QRGEGEA 135 + +++F +LG D L P QL + A Sbjct: 163 IYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQLLQPAVFSPVDAGYKQISA 222 Query: 136 MLTALTHL--SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 L L +R + ++ +L LL + P P + ++ + Sbjct: 223 CLRRAEELCSARERGYELGVKAALLELLLYLLRMCPEAPERDTPDM-ERLKRVLQRIEQD 281 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 YA+PLT +A + +H + F + + Y+ R+A A L++ I +A Sbjct: 282 YAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAENLRETDDKILVIA 341 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + GF + F R F++++G+TP Y Sbjct: 342 ENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 97/287 (33%), Gaps = 16/287 (5%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVG--SLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 D L +F Q + + D L V+ G+ + Q Sbjct: 1 MEDAIIPYELPEVENHSFFFIDQQVEVNLEAKLHQHDAWELYYVVHGQGNRMAGDTLQPF 60 Query: 71 VEGEMLFIPARAANLPVNNKP-------VMLLSLVFAPTWLG-----LSFYDSRTTSLLH 118 G+++ IP + N V L + F+ + L +R + + Sbjct: 61 TAGDVVLIPPSMIHRWEYNADSTDEEGHVRYLMVAFSHSLLERCIEVFPELRNRLSGVQF 120 Query: 119 PARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPR 178 P ++ +L+ + + + + L+ + + P + R Sbjct: 121 PTDALKFGLESSRIIRRILSEINEMDELERLSAMFR-LLPVIFTSSDYTLAGKPMRIE-R 178 Query: 179 GDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKA 238 IC +V +Y + + +A+ + + F + M F ++V R+ A Sbjct: 179 DVRRMQQICAYVMKHYVHSIALDDIAEEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTA 238 Query: 239 RMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 +L+ + E+ GF D +F RVF G++P +Y +++ Sbjct: 239 CHLLKNTQRGVAEICYMVGFNDLPHFVRVFTNTMGMSPTKYRKQYKN 285 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 90/263 (34%), Gaps = 14/263 (5%) Query: 32 FASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP 91 + V + G + + L GE FI + + + P Sbjct: 23 HHDKDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGELHEIKSGGP 82 Query: 92 VMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL------PSLQRGEGEAMLTALTHLSR 145 + ++VF P L + YD S + P L E + +L + + R Sbjct: 83 SLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVFSPEESQMILFHMQEIIR 142 Query: 146 SPLEQNIIQPL--------VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP 197 L +L L + + + + ++ +NYA P Sbjct: 143 LYHTLPSCASLSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEYIHENYAGP 202 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 ++ +A+ ++PN+ F Q I ++ R+ KA IL L + +VA G Sbjct: 203 ISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPVSQVAISVG 262 Query: 258 FPDSDYFCRVFRRQFGLTPGEYS 280 F + YF R FR +TP EY Sbjct: 263 FDNFSYFIRKFREYKNVTPTEYR 285 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 97/254 (38%), Gaps = 13/254 (5%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP--VMLLSLV 98 V + L ++ +G+ + + G+++F+ + + +++ Sbjct: 36 VNLHWHNEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENIL 95 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQ--------IQLPSLQRGEGEAMLTALTHL--SRSPL 148 F + L S YD + P I +++ + L R Sbjct: 96 FKSSLLKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYA 155 Query: 149 EQNIIQPLVLSLLHLCRSVVNMPP-GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 Q ++ + + +L S + + +I ++V +++ ++ E +A Sbjct: 156 YQLAVKSYLFQIFYLLISNCGLNQIKPISKKALEKIKTILSYVAEHFQDNISIEEIAGHC 215 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 + ++ K F + M F++Y+ R+ A +L I +A GF + YF R Sbjct: 216 FYSKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRC 275 Query: 268 FRRQFGLTPGEYSA 281 F++++G+TPG+Y Sbjct: 276 FKKKYGITPGKYRK 289 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 103/278 (37%), Gaps = 16/278 (5%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 G L P + + +A + +L G +E K+ + GE LF Sbjct: 13 HGTALIPIAIRHLNYAEGLENF-FYLHWHSEFEFVYILSGAILYSIEDKEYCVKAGEGLF 71 Query: 78 IPARAANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHP--------ARQIQLPS 127 I + + + P ++F P G + S + ++P + Sbjct: 72 IHSNQLHAARSFNGMPCEACVVLFHPNLFGHNKQSSTYSKFIYPILEGDLVFENYFKCEE 131 Query: 128 LQRGEGEAMLTALTHLSRSPLEQN--IIQPLVLSLLHLCRSVVNMPPGNSQPRGD---FL 182 + +L+ L L + +N +++ + + HLC + + Sbjct: 132 EWQRLVMKLLSELDDLKYENVSENELLLKSKIFEIWHLCYKNSVALAPQGRKNRNYKLER 191 Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 + N++ +NY + +T ++A+ ++ F + + I YV R+ ++ +L Sbjct: 192 MQPVLNYIHENYKEEITLMALAKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQSCTLL 251 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + I ++A+ GF + YF R F + G +P +Y Sbjct: 252 TETDWKIADIARNVGFNNISYFNREFIKAIGCSPSKYR 289 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 129/281 (45%), Gaps = 18/281 (6%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 S + + + +L + + DF L IV+ G ++++ ++ + +G++ Sbjct: 5 KLSYFTNDEGFPFFIQYGYHSNNLSIHTHT-DFSELVIVMNGTATHIVDNEKFNIKKGDV 63 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ----------- 124 I + + N K + ++++ L L+ YD + + H I+ Sbjct: 64 FVINSNTCHGYENAKDFRICNIMYRSENLLLADYDIKKNAGFHALFVIEPYFTKEHSFKS 123 Query: 125 ---LPSLQRGEGEAMLTAL--THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRG 179 L L + +L +L +++++ + + L + L+ + + +S+ Sbjct: 124 NLTLKPLDFEKIHILLDSLLSEYMTKTDGWKTSTKALFMLLVVTLARLYDF-GNSSEKVD 182 Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 ++++++Y + ++ + +A+ + +P H +++F++ + + Y+ +R+ +A Sbjct: 183 VINIAKSISYIENHYTEDISIDLLAKISHYSPRHFARIFSETYSTTPLNYIISLRIRRAC 242 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 +L++ L I +A +CGF DS+YF R+F++ LTP +Y Sbjct: 243 SLLKETTLPISTIAIQCGFSDSNYFSRIFKKNLYLTPKQYR 283 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 103/286 (36%), Gaps = 16/286 (5%) Query: 14 ADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEG 73 S P ++ + S + + + + RG+ + + Sbjct: 14 ESFLSSSTFIPVIVKTIERFHD-TSWHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPN 72 Query: 74 EMLFIPARAANLPV--NNKPVMLLSLVFA-PTWLGLSFYDSRTTSLLHPAR------QIQ 124 +++ I + + + + L F + D + L I Sbjct: 73 DIIIIKPNQPHKFIVKSESGCEFIVLSFKFVNRFDGQYSDVSLENFLDFVSGKETGPFIT 132 Query: 125 LPSLQRGEGEAMLTALTHLSRSPL--EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL 182 L Q+ + +L + +P + + LV+ L L + M NS Sbjct: 133 LKVSQKNDIIVLLNRILKERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPK 192 Query: 183 YHSICN----WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKA 238 + ++ +NY + ++ + +A++ ++ ++ ++ F + + I Y+ +R+ +A Sbjct: 193 IKELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERA 252 Query: 239 RMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + +L+ I ++A GF + F +F++ LTP +Y Q Sbjct: 253 KELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 101/260 (38%), Gaps = 7/260 (2%) Query: 26 LLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL 85 L ++ F L VL G L+E + + + +++ I + Sbjct: 19 HLLYSTYSKYEEDWSSYPHTHYFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHT 78 Query: 86 PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSR 145 ++ L +V L D+ L H ++ +L + + Sbjct: 79 EKSSLEDPLEYIVLGVDGLNFVIDDANEYLLFHSD---EMKDRLDFYFRTILEETENSQK 135 Query: 146 SPLE--QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESV 203 + QN++ LV+ L S V + P + + ++ ++ + +T + + Sbjct: 136 DYEKVCQNLLNILVVHLSRYASSSVEIFPFHKMESRE--CSRAKRYIDSSFRENITLDKL 193 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 A+ I + S F + + + Y+ R+ ++ +L +S+ ++AQ+CGF S Y Sbjct: 194 AEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSSY 253 Query: 264 FCRVFRRQFGLTPGEYSARF 283 F + FR+ G+TP Y +F Sbjct: 254 FTQCFRKSCGMTPTAYRKQF 273 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 101/275 (36%), Gaps = 13/275 (4%) Query: 20 LVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIP 79 + L V+ A C LD G + + G+ + I Sbjct: 8 FQEDRNLPFSVYIAQDEK---FSWHCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVIIH 64 Query: 80 ARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA------RQIQLPSLQRGEG 133 + + N LL + + L +F + L P Q ++ + Sbjct: 65 TMEDHTLIRNSDCKLLGVQMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRRIRVPKGSLL 124 Query: 134 EAMLTAL--THLSRSPLEQNIIQPLVLSLLHLCRS--VVNMPPGNSQPRGDFLYHSICNW 189 E++L+ + + + P + I+ +L L V+ + N + + ++ Sbjct: 125 ESILSEILVEYQKKQPGYEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDY 184 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 ++ + L+ + A+ ++ H +LF + F+EY ++R+ +A +L +I Sbjct: 185 MEQHIETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTI 244 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +A GF YF RVF+++ G P Y + + Sbjct: 245 TNIAFETGFGSVAYFNRVFKKETGQAPANYRKKMR 279 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 100/278 (35%), Gaps = 17/278 (6%) Query: 23 NPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 + V+ P + D L +RG + ++ + G+++F+ Sbjct: 15 DQDFPFDVFHIIPPGKEVLHLHWHDDLELIYFIRGNATFYIGSETVKPEPGDLMFVNKGM 74 Query: 83 ANLPVNNKP--VMLLSLVFAP----TWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 + + V +LVF + + S + T R + ++ Sbjct: 75 IHTGFADDEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRFFPILLPVTDAYNSL 134 Query: 137 LTAL------THLSRSPLEQNIIQPLVLSLLHLCRSVVNMP-----PGNSQPRGDFLYHS 185 + + + ++ Q IQ ++ LL ++ + Sbjct: 135 IAGIVKQMIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPTGSADTVGAELTDRFKE 194 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + +V+ +Y + LT + A N++ H + F + F+EYV +R+ A +L Sbjct: 195 LIAFVERHYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVNLLRINAAEQLLIHS 254 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 I E+A + GF +YF ++FR+ +P + R+ Sbjct: 255 SDPITEIAFKVGFGSVNYFSQMFRQYKRHSPSQCRKRY 292 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 109/273 (39%), Gaps = 11/273 (4%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 S + L + + + F L V+ G+ +++ ++ + + + Sbjct: 11 SDIKNLSFRLESITKSKYDSDWHSTLHTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVI 70 Query: 78 IPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAML 137 I + + V++ L +V L S + + R E + +L Sbjct: 71 INPQVEHTEVSSPDSPLEYIVVGIQGLSFS-----NLTPVDQGGHPFSFFNLRDEQKDIL 125 Query: 138 TALTHLSRSPLEQNIIQPLVLS------LLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQ 191 L + + Q + LV L+ + R S + I ++++ Sbjct: 126 RYLNAMVQEATNQALSYDLVCHNLLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLK 185 Query: 192 DNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHE 251 Y + + E++A +++ ++S F + M +EY+ +R+ +++++L+ + SI + Sbjct: 186 TYYRESIQLEALASMTHLSRFYISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQ 245 Query: 252 VAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 VA GF YF + FR+ G++P +Y ++Q Sbjct: 246 VADIVGFTTPTYFSKQFRKITGISPTDYREKYQ 278 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 105/295 (35%), Gaps = 16/295 (5%) Query: 2 KAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLP-VGSLCIDFPR------LDIV 54 K G P ++ + L + + R+ + P + L Sbjct: 4 KKDGFPNEKAIVIPQENLLRIKENPMTRLLHPTDVGYYPCAEGHYRERTEGSPQHILIYC 63 Query: 55 LRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VNNKPVMLLSLVFAPTWLGLSFYDSR 112 GE + + + + + I A ++ + P + + F L Sbjct: 64 HEGEGWYNIGKGKCTVKKNDFFIIEAGTPHVYAASTSHPWSIYWIHFTGEQSHLFSELFN 123 Query: 113 TTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPP 172 T + + + + E ++ ++ + L L +L S +P Sbjct: 124 RTIYIDDSPTARFNDRIQLFNEILVNL-----EMGYSIENLEYITLCLWYLLGSFRYIPQ 178 Query: 173 --GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYV 230 ++P+ + N+++ N + LT E +A+ N +P +LS LF Q M I Y Sbjct: 179 FREINKPKTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSGMSPINYF 238 Query: 231 RWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 +++ KA +L E+A F D YF +VF + ++P EY + +G Sbjct: 239 NQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSPKEYRMKKKG 293 >UniRef50_D0IBI1 Putative ARAC-type regulatory protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBI1_VIBHO Length = 275 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 84/271 (30%), Positives = 150/271 (55%), Gaps = 6/271 (2%) Query: 14 ADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLE----AKQQR 69 ++ L+ L +V + + P G+ ++F RL+++L GEY +++ K+ Sbjct: 3 HNIAEYLINFNGKLSKVCLSKN--TPPQGAYQVNFNRLELILDGEYDLIVDARTGEKKLL 60 Query: 70 LVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQ 129 L +GEM++IP+ A + P +LS++F+ +G SF + ++ +P Sbjct: 61 LQQGEMVYIPSNAWSKPTWESTCKILSILFSKHQIGFSFVHHEVGNGFVDVQKYAMPLPT 120 Query: 130 RGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNW 189 E +L AL +S + L +L+ C ++ P R + LY S+C + Sbjct: 121 SMAVEHVLDALNSMSDESRSMVMAGHLANALVTYCNELLQGPQQEKVSRREKLYRSMCIY 180 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 VQ+N+ + +TR SVA F ++ H+S+LF Q G++R+ +YV +VR+ +A+ +L+KY+ + Sbjct: 181 VQENFHKNITRTSVASRFGVSSAHVSRLFNQEGSVRYADYVTYVRLDRAKFMLKKYNFKV 240 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 E+A RCGF D++YFCRVF+++ G TP EY Sbjct: 241 DEIAHRCGFKDTNYFCRVFKQKTGKTPSEYR 271 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 112/309 (36%), Gaps = 26/309 (8%) Query: 1 MKAPGLPADQQFFADLFSGLVL--NPQLLGRVWFASQPASLPVGS-----LCIDFPRLDI 53 +K P + Q A+ + +P + RV S DF L + Sbjct: 5 IKNPNKESGQGVVAEGINYFDNPYHPLTVRRVKAGSDSEITHEHDLTEVRHTHDFCELAL 64 Query: 54 VLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRT 113 + RG + LE + + G++ + + ++ + + + +++++F P L L R Sbjct: 65 ITRGSAMHWLEGAEFPITAGDVFVLQGQQSHYYYDLQKLEMINIMFDPEQLNLPETRLRK 124 Query: 114 TSLLHPAR--------------QIQLPSLQRGEGEAMLTALTHLSR---SPLEQNIIQPL 156 + L E + L + R E + Sbjct: 125 IPGYRALFLLEPLFRKQHRFTSHLHLSRSTLAHSERIAVELDNEVRGKMEGYEAAMFAKF 184 Query: 157 VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSK 216 V +++L R + ++ + ++D + +P E A +++ + + Sbjct: 185 VELVVYLSR--LYQETESTNAEALLRVAKVIGSIEDEFTKPWKVEDFAAMAHMSRANFMR 242 Query: 217 LFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP 276 +F I Y+ +R+ K+ +L LSI E+A GF DS+Y+ R F+ G++P Sbjct: 243 VFRTATGETPINYLLQLRIQKSMTLLTSTKLSISEIAFEVGFNDSNYYTRQFKASQGISP 302 Query: 277 GEYSARFQG 285 Y G Sbjct: 303 LAYRRTHTG 311 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 104/272 (38%), Gaps = 13/272 (4%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 L P+ +V+ P ++P +F L V+ GE + L L G + Sbjct: 12 EDYRLQPRAPVQVFHGIHPGTIP--LHWHEFYELSYVVGGEGEHRLNGSAYPLSSGTLFL 69 Query: 78 IPARAANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 + + V+ +KP+ + +++F + + Y L QL +Q + A Sbjct: 70 LTPADFHELVSVEDKPLEIYNVIFTEAMMDDNLYHWLFGGKL--VLHAQLEEMQHRQIFA 127 Query: 136 MLTALTHL---SRSPLEQNIIQPLVLSLLHLCRSVVNM----PPGNSQPRGDFLYHSICN 188 + SR E I L L+ L R G + + Sbjct: 128 DYERMREETGASREGSEIAIRATLQRLLVDLNRGSTANCALPTNGTGNRQLNVNLQRALI 187 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 ++ ++ + L E A + + S+ F++ F Y++ VRM A +L+ L Sbjct: 188 YIHHHFREDLRLEDAAAQAQYSATYFSECFSKSVGQSFQRYLQNVRMQFAESLLRVSSLP 247 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + E+ GF +F RVFR++ G++P +Y Sbjct: 248 VTEICYASGFNTLGHFERVFRQRKGMSPRQYR 279 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 105/291 (36%), Gaps = 19/291 (6%) Query: 12 FFADLFSGLVLNPQL----LGRVWFAS-QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAK 66 Q R + + + + V G ++ Sbjct: 1 MLLSPLETTPNEEQRKHLLPYRFFHNEVKNGRPDILFHWHPELEVTYVCEGTARYHIDYD 60 Query: 67 QQRLVEGEMLFIPARAANL--PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQ-- 122 G+++ I + P+ + + + F LGLS D + L P + Sbjct: 61 FFNSQAGDIILIRPNGMHSIHPIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQNSV 120 Query: 123 ------IQLPSLQRGEGEAMLTALTHLSRSP--LEQNIIQPLVLSLLHLC--RSVVNMPP 172 I+ + +A L + L++ + +++ + ++L V Sbjct: 121 NKFVHCIKPHMPGYDDIKACLFDIFSLAKEESRHFEILLKSKLHEFIYLLYFHRYVVKKN 180 Query: 173 GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRW 232 + R + + +++ ++Y+ LT + ++QF + H +F QH E+V Sbjct: 181 TDDTYRKNEKIRQLIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQ 240 Query: 233 VRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 VR++KA +L I E+A GF + F R F+R + LTP +Y ++ Sbjct: 241 VRLSKACELLIHSTRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKY 291 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 83/265 (31%), Gaps = 14/265 (5%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN--NKPV 92 + + + V G ++ G++ I + N+P Sbjct: 42 ENGRPDILFHWHPELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDNQPH 101 Query: 93 MLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQ------------RGEGEAMLTAL 140 +L F LG S D + L P + Q + + + Sbjct: 102 HTDTLHFHLDMLGQSLVDPLSLRYLQPLQNSNFKFKQCLRPSDEGYTEIKDLLFKIFKMI 161 Query: 141 THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTR 200 R + L L +V + R + I +++ +YA+ LT Sbjct: 162 RQKERHYELLLKSKLEELIYLLYFYRLVERKTSDDHYRKNEKIREIIDYINQHYAENLTI 221 Query: 201 ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPD 260 E +++ + H +F QH E++ R+ A L+ + E+A GF + Sbjct: 222 EKLSELMGYSKTHFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVGFNN 281 Query: 261 SDYFCRVFRRQFGLTPGEYSARFQG 285 F R F+ + TP +Y Sbjct: 282 LSNFNRQFKHYYDQTPSQYRKTHSN 306 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 108/275 (39%), Gaps = 12/275 (4%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 G +P + A Q +PV D + V G + + G+ Sbjct: 11 HGTKDDPFSTYHIENAGQSFQIPV--HWHDEFEIIYVKSGFLTVNISGENYIGKPGDAFV 68 Query: 78 IPARAANLPVNNKPVM-LLSLVFAPTWLGLSFYDSRTTSLLHP--ARQIQLPSLQRGEGE 134 + + + + + +F ++ D LL P + ++ + + + Sbjct: 69 VSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPSVKDTIK 128 Query: 135 AMLTALTHLSRSPLEQNIIQ-----PLVLSLLHLCRSVVNM--PPGNSQPRGDFLYHSIC 187 + L + + + + + LL + N+ + + + Sbjct: 129 ELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGRNIVEKEMV 188 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++Q N+ ++ + + F+++ ++S+ F +H + +YV ++R+ A+ +LQ + Sbjct: 189 SYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDI 248 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 S+ E A R G+ + YF R F++ +G++P +Y + Sbjct: 249 SVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKK 283 >UniRef50_A7ML57 HTH-type transcriptional activator rhaR n=92 Tax=Enterobacteriaceae RepID=RHAR_ENTS8 Length = 283 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 5/256 (1%) Query: 33 ASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPV 92 A + +F L +V RG ++L + R+ G++ +I A + + + Sbjct: 23 ADRYPQNVFAEHTHEFCELVLVWRGNGLHVLNDRPYRITCGDLFYIRAEDRHSYQSVNDL 82 Query: 93 MLLSLVFAPTWLGLSFYDSRTTSLLHPAR---QIQLPSLQRGEGEAMLTALTHLS--RSP 147 +L ++++ P L L+ + +L S + ++ L H S + Sbjct: 83 VLHNIIYCPERLQLNVNWRDLLENPRGVNGDPRWRLSSQGMVQARQVIDQLEHESPKQDA 142 Query: 148 LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 L + + L L L R P G + P + + ++ P + + Sbjct: 143 LSHCLAESLFLQLAITLRRHRYQPSGGTGPGEGETLDLLMAALGNSLDVPFDLQHFCSHY 202 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 I L +LF Q M +Y+R +R+ +A+ +L+ L I E+A RCGF DS+YF V Sbjct: 203 QIAERPLRQLFRQQTGMTISQYLRQLRICQAQYLLRHSSLLISEIAARCGFEDSNYFSVV 262 Query: 268 FRRQFGLTPGEYSARF 283 F R+ G+TP + ++ Sbjct: 263 FTRETGVTPRVWRQQW 278 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 119/267 (44%), Gaps = 8/267 (2%) Query: 25 QLLGRVWFASQPASLPVG-SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 + + S+ S + + L +L GE ++ + +G+++ + Sbjct: 13 DHNFSIQYMSRNGSSSMPRPHEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDL 72 Query: 84 NLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHP--ARQIQLPSLQRGEGEAMLTALT 141 + +++ ++ ++ + + D+ +LL +R I++P + E E +L ++ Sbjct: 73 HSTASSEKLLFERVLIGFSRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSML 132 Query: 142 HLSR--SPLEQNIIQPLVLSLL---HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 + ++++ L+ LL H + + + I +++ N+ + Sbjct: 133 AECQTEQTHYSSLVRSLMNELLIRLHRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFHE 192 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 LT E VA+ F I+P++LS++F + F EYV+ VR+ +A+ +L S+ +++ Sbjct: 193 KLTLEQVAKQFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELA 252 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARF 283 GF +F + F++ G TP +Y R Sbjct: 253 GFEHIAHFNKTFKKIAGTTPLQYRKRH 279 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 104/266 (39%), Gaps = 4/266 (1%) Query: 20 LVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIP 79 L+ N L V + F L V +G G + A + + E + + I Sbjct: 14 LINNQARLLYVSSSKYEGDWHSQLHSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIIN 73 Query: 80 ARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLH-PARQIQLPSLQRGEGEAMLT 138 + V+ L +V A + + + + L + Sbjct: 74 PNTMHTEVSRDRNPLEYIVIAIDGISFEIPEDSLKDYISCNYANYKNEILFYLNLMVKES 133 Query: 139 ALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPL 198 + + Q ++Q L++++L L R V++ G + + I N++ NY + + Sbjct: 134 QAKNELYDDMCQQLMQVLLINILRLNRINVSLTQGKTIRKE---IFMIKNYIDRNYHKEI 190 Query: 199 TRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGF 258 T +++A+ ++ +L+ F + I Y+ R+ +++ +L+ LSI +++ GF Sbjct: 191 TLDTLAEKTHMNKFYLAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGF 250 Query: 259 PDSDYFCRVFRRQFGLTPGEYSARFQ 284 YF + F++ +P +Y Q Sbjct: 251 SSLSYFAQAFKKSTNFSPLQYRKNHQ 276 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 98/279 (35%), Gaps = 16/279 (5%) Query: 20 LVLNPQLLGRVWFASQPASLPVG--SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 L +F Q + + D L V+ G + Q G++ Sbjct: 8 YELPEVENHSFFFIDQRVTTSIEAKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGDVAL 67 Query: 78 IPARAAN-------LPVNNKPVMLLSLVFAPTWLG-----LSFYDSRTTSLLHPARQIQL 125 IP + ++ V L + F+ + + +R T + P ++ Sbjct: 68 IPPSMLHHWEYSPDSADDDGYVRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNALKF 127 Query: 126 PSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHS 185 + +L+ + + + + L+ ++ P N + R Sbjct: 128 GTGSSQTIRRILSQMNDMDELGRLCEMFR-LLPAIFTSSDHTFAGKPMNIE-RDVRRMQQ 185 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 IC +V +Y ++ + +A + + F + M F +YV R+ A +L+ Sbjct: 186 ICVYVMTHYIHTISLDDIAAEVGMNRSAFCSYFKRCKGMTFSQYVTQYRLNTACELLKHS 245 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + E+ GF D +F RVF+ G++P +Y RFQ Sbjct: 246 QKQVSEICFTVGFNDLPHFVRVFKNTLGMSPSKYRRRFQ 284 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 96/264 (36%), Gaps = 9/264 (3%) Query: 21 VLNPQLLGRVWFASQPASLPVG---SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 + ++ +P D + +V+ G+ + L EG++ Sbjct: 12 SYTDNVELSIFNCGHEYCVPGHTWGPGVRDHYLIHLVVAGKGVYQVGGVSHTLQEGDLFL 71 Query: 78 IPARAANLPVNNK--PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 ++ P + F S LHP + P R EA Sbjct: 72 AKPNQLITYAADETDPWEYYWVGFNGA-CANKLVQQTPFSDLHPVHHCKDPQAVR---EA 127 Query: 136 MLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 + P + ++ + + N S ++Q NY+ Sbjct: 128 LYNIYLSRGPEPQCEALMTGYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYS 187 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 ++ + +A+ ++ +HL ++F + I+Y+ R+++A +L+ +LSI E+A Sbjct: 188 HDISVDDIAKAVGVSRSHLYRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVS 247 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEY 279 GF D YF RVF++ G+ P +Y Sbjct: 248 VGFFDQFYFSRVFKKVKGVPPSKY 271 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 104/282 (36%), Gaps = 11/282 (3%) Query: 11 QFFADLFSGLVLNPQLLGRVWF-ASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQR 69 + + + + + + + ++ GE ++ K Sbjct: 1 MVISSETHTVSYGEEEGEFYYHRIHRTKPFERNNHYHGTYEIYYLVSGERHYFIKEKLYS 60 Query: 70 LVEGEMLFIPARAANLPVNNKP--VMLLSLVFAPTWLGL---SFYDSRTTSLLHPARQIQ 124 + G+++ I + + + + F+ ++LG ++ Sbjct: 61 IRAGDLILINKFDVHKTSGHGDPEHERIVINFSDSFLGKGHPLLASGLLGMFNQDRPLLR 120 Query: 125 LPSLQRGEGEAMLTALTHLSRSPL--EQNIIQPLVLSLL---HLCRSVVNMPPGNSQPRG 179 L ++ +L + R ++++Q L+ LL + ++P S Sbjct: 121 LTVPEQAIIMQILNKMADEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPL 180 Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 + ++ +YA +T + +++ F I+P +LS++F + I Y+ R+ +A+ Sbjct: 181 HQKITDVVKFIHVHYADKITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQ 240 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +L L I ++A+ GF +F R F++ +T +Y Sbjct: 241 RLLTDTDLKIVDIAESIGFESLTHFDRTFKKIMNMTASQYRK 282 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 100/250 (40%), Gaps = 10/250 (4%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VNNKPVMLLSLV 98 + S ++ + + GE ++++ + GE++ + N+ P + L Sbjct: 40 MKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRIVLY 99 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSP--LEQNIIQPL 156 F + + +L + + R + ML L +P ++ + L Sbjct: 100 FESSEVAS---KELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRTL 156 Query: 157 V-LSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLS 215 + + L + P + G I +++ +Y + +T E +AQ F ++ +L Sbjct: 157 LNMFLFTMLMHTRRREPEQMEETGRT--TQIVSYIHSHYQEDITLEQLAQKFYVSQFYLC 214 Query: 216 KLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLT 275 + F ++ ++YV R+ A+ L + +I E+++ GF + +F RVF+ G T Sbjct: 215 REFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGTT 274 Query: 276 PGEYSARFQG 285 P Y Q Sbjct: 275 PSGYRKHHQN 284 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 96/240 (40%), Gaps = 5/240 (2%) Query: 44 LCI-DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN-NKPVMLLSLVFAP 101 D + +V G ++ G++LF + + + + L + Sbjct: 2 HQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGVSD 61 Query: 102 TWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLL 161 L + L P + Q + L+ + ++ L ++L Sbjct: 62 FQLPGRRANEMVGRLYAPQLSLDA---QFDAVRTLFHTAVQLALAGDAPCVLDQLTCAIL 118 Query: 162 HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQH 221 + +P+ + L ++ ++ +Y + +T +S+A N P +L+ F +H Sbjct: 119 CKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAFREH 178 Query: 222 GTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 ++Y+ R+ +A+ +L SI E+A CG+ +S+YF VF+R G+TPG+Y Sbjct: 179 IGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRR 238 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 92/277 (33%), Gaps = 17/277 (6%) Query: 24 PQLLGRVWFASQPASLPVGS---LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 P+ +F + P D L V+ G+ + Q G++ IP Sbjct: 11 PEAENHSFFFIDQRTEPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEAGDVALIPP 70 Query: 81 RAANLPV-------NNKPVMLLSLVFAPTWLGLSF-----YDSRTTSLLHPARQIQLPSL 128 + + V L + F + + S +R ++ P ++ Sbjct: 71 SMLHRWEYAADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDALKFGPE 130 Query: 129 QRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICN 188 L+ + + + + L+ + + P + + IC Sbjct: 131 SVRVIRKTLSEMNGMDELGRLSAMFR-LLPVIFTSSDHIFAGKPMRIE-KNVRRMQQICA 188 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +V +Y + + +A + + F + M F ++V R+ A +L+ Sbjct: 189 YVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHSQKG 248 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 + E+ GF D +F RVF G+ P +Y +F+ Sbjct: 249 VSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQFKA 285 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 103/282 (36%), Gaps = 19/282 (6%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 S + + V+ + + + V+ GE + + + + +G + Sbjct: 16 HSSIEEHFHNQFPVFINRWEEGFDLREHDHAYLEIVYVMSGEGYHYVADEVNKTSKGSLY 75 Query: 77 FIPARAANLPVNN---KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQI---------- 123 IP +++ N +++ +L P W+G + Sbjct: 76 IIPIGTSHIFRPNGTANRLLVYNLCIRPDWIGELGVWLSQYCRDTDVLHVLDGNPGTYLF 135 Query: 124 --QLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF 181 P E + T S E ++ L+ L + R + Q G Sbjct: 136 LRDTPLELAPSFEQLHREFTEESW-GFETTVLAGLLQLLTRISRKLKTQDSTGDQTTGST 194 Query: 182 L---YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKA 238 + SI + + A+PL E +A I+ H +LF Q M F EYV+ R+ A Sbjct: 195 RHSEFVSIVEHINRHIAEPLKMEQLADQAGISQRHFIRLFRQQTGMGFSEYVQNKRVELA 254 Query: 239 RMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 +L S+ ++A++ G+ D +F VFR+ G+TP +Y Sbjct: 255 CQLLTGTSQSVADIAKKVGYQDPAHFREVFRKVMGITPSQYR 296 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 100/273 (36%), Gaps = 13/273 (4%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 G P V+ P+ D + + G ++ + G Sbjct: 11 HGTKDYPYSQYHVFNQQTAFQFPI--HWHDELEIIYIRNGSINITIDNELFTGTGGSFFI 68 Query: 78 IPARAANLPVNNK-PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 + + +N +++F ++ D L P R + + Sbjct: 69 VNPGELHYMGSNDLNADYYTILFPLEFISFQSNDYVENMLFKPMRSSHVILTHSLPYSEI 128 Query: 137 LTALTHL---------SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSIC 187 + L Q + L+L +L S+ ++ + D I Sbjct: 129 YAEIISLLEKLIYINKYEKGFYQLDCKILLLEILSNILSIPDILVKKTSNASDMR-REII 187 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +V DNY + +T +A F+++ ++S+ F +H + F +YV +R+ A+ +L ++ Sbjct: 188 TYVNDNYLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNI 247 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 SI +VA GFP+ YF R F+ +G TP Y Sbjct: 248 SITDVALSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 6/260 (2%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN 89 V A + DF L IV RG ++ R+ G++ ++ A + + Sbjct: 21 VTVAERSPQSAFPLHHHDFDELVIVWRGNGLHIWNDVPYRITCGDLFYVTADDRHSYESV 80 Query: 90 KPVMLLSLVFAPTWLGLSFYDSRTTS---LLHPARQIQLPSLQRGEGEAMLTALTH--LS 144 + L ++++ L L + R +L + +LT + Sbjct: 81 HALELDNILYIRPRLTLPTDWQNLLPDGGVAQQQRYWRLGEQGMAIIRDRVESLTQECMK 140 Query: 145 RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 PL + + L++ + L + PG +Q + N ++D+ AQP E+ Sbjct: 141 SDPLSLQLSEVLLMQIALLALRYRHA-PGETQLADAHQLDLLMNALRDSIAQPFRLEAFC 199 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 Q + + L F Q M +Y+R +R+ +A +L+ +I EVA +CGF DS+YF Sbjct: 200 QQYGFSLRSLRSRFKQQTGMSVSQYLRQLRLCRAMELLRYDRQTISEVAAQCGFDDSNYF 259 Query: 265 CRVFRRQFGLTPGEYSARFQ 284 VF + FG+TP Y RFQ Sbjct: 260 SVVFHQAFGVTPSSYRQRFQ 279 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 122/298 (40%), Gaps = 22/298 (7%) Query: 3 APGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNL 62 +PG P A++F ++ A +F + V G Sbjct: 31 SPGSPTRNLKKAEMFFRGDNRFSVILHPKLAIAQR-----YHTHEFFEIIYVYAGSCTTT 85 Query: 63 LEAKQQRLVEGEMLFIPARAANLPVNNK-PVMLLSLVFAPTWLGLSFYDSRTTSLLHPAR 121 ++ +Q L G++LF+ + ++ + ++ +++ P +L S + + + + Sbjct: 86 VDGEQMVLKAGDLLFLNIQTGHVISVDSWDDIVFNILIKPDFLEQSLFHLLSENDVFLNF 145 Query: 122 QIQLPSLQRGEGEAMLTA--------------LTHLSRSPLEQNIIQPLVLSLLHLC-RS 166 ++ + + +L + +L + P +I+ ++L+ L R Sbjct: 146 YLESLYNRTMSEKYLLFQENTDEIASTADRIVIEYLRQDPFAMKVIEAQFVTLVSLLARE 205 Query: 167 VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRF 226 P G I W+ ++YA T +S A+ F+ T ++LS L ++ F Sbjct: 206 NRRQAPTGETIPGKAFVPEILQWLSNHYAGA-TLKSTAEHFHYTTSYLSFLIKEYTGKNF 264 Query: 227 IEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + ++ ++ +A L++ LS+ ++ + G+ D+ YFCRVF+ G TP EY Q Sbjct: 265 LRIIQDFKIREAERYLKETSLSVERISDQLGYKDAAYFCRVFKNTTGATPSEYRRSQQ 322 >UniRef50_C4LCV7 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCV7_TOLAT Length = 275 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 106/260 (40%), Gaps = 5/260 (1%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN 89 + + P C DF L +V G ++ + + + G ++++ + + Sbjct: 16 INVLPRLPQEPFPEHCHDFHELVLVKSGCGIHVCDGRAIHVSRGSVIYLKDEDVHCFDHM 75 Query: 90 KPVMLLSLVFAPTWLGLS--FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLS--R 145 + L +++F P S T S + Q+ + + + E +LT + + + Sbjct: 76 DNLCLTNVLFMPDEFHSSPHLTSLLTESCRSDSGQMMVCPQIQQQAELLLTQIHDENDRQ 135 Query: 146 SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQ 205 +++ L L L + D L + + N++ +NY L ++ Sbjct: 136 DAYSSLMVETLFSQLAVLLWRDRQLNKKYRSEEQDNLIN-LINYINENYQNELNWSELSD 194 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 FNI L++ +H + Y+ VR+ A +L ++ ++A CGF DS+YF Sbjct: 195 SFNIPLRTLNRKLQEHTGLTPNNYLGRVRLCHASYLLSHSQDAVTDIAFSCGFNDSNYFS 254 Query: 266 RVFRRQFGLTPGEYSARFQG 285 F + F +TP +Y R++ Sbjct: 255 SKFHQAFNVTPMQYRKRYRN 274 >UniRef50_C0Q3L5 L-rhamnose operon transcriptional activator n=16 Tax=Enterobacteriaceae RepID=C0Q3L5_SALPC Length = 322 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 5/256 (1%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN 89 V A + +F L +V RG ++L + R+ G++ +I A + + Sbjct: 60 VTVADRYPQDVFAEHTHEFCELVMVWRGNGLHVLNERPYRITRGDLFYIRAEDKHSYTSV 119 Query: 90 KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPAR---QIQLPSLQRGEGEAMLTALTHLS-- 144 ++L ++++ P L L+ A+ +L S+ + ++ L H S Sbjct: 120 NDLVLQNIIYCPERLKLNVNWQAMIPGFQGAQWHPHWRLGSMGMNQARQVINQLEHESNG 179 Query: 145 RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 R PL + + L L+ + + L + + ++ P ++ Sbjct: 180 RDPLANEMAELLFGQLVMTLKRHRYATDDLPTTSRETLLDKLITALANSLECPFALDAFC 239 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 Q + L + F M +Y+R VR+ A+ +LQ L + E++ +CGF DS+YF Sbjct: 240 QQEQCSERVLRQQFRAQTGMTINQYLRQVRICHAQYLLQHSPLMVSEISMQCGFEDSNYF 299 Query: 265 CRVFRRQFGLTPGEYS 280 VF R+ G+TP ++ Sbjct: 300 SVVFTRETGMTPSQWR 315 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 104/270 (38%), Gaps = 15/270 (5%) Query: 28 GRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV 87 + + + + F L V RG N + EGEML + A+ P Sbjct: 56 ISLHPRPENVNPKMLLHKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPNTAHCPE 115 Query: 88 N-NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLT-------- 138 + +++F + S + L + ++ + + Sbjct: 116 TLTDQDCVFNIMFRQNFFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLPGKASAD 175 Query: 139 -----ALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 + + + I Q L++ L + + + L I ++Q++ Sbjct: 176 TIERLIVECFEKQSCYETITQSLLVELFAYLARNSDNSFSYPKNNHERLILKIITYIQES 235 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 A+ +T + V++ F + +LS++ Q+ F E VR R+ KA+ L+ LSI ++A Sbjct: 236 PAE-ITLQKVSEQFQYSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLSILDIA 294 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 G+ D +F +VF+++ G TP EY + Sbjct: 295 LILGYNDVSHFYKVFKQEIGCTPTEYRKHY 324 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 103/279 (36%), Gaps = 13/279 (4%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 ++L V S + ++ + G ++ ++ +G++L Sbjct: 13 EKVILAKNYPIFVADTIGVTSPYQKLHWHNVLEINYIKSGMGYYIINGQKFEFQQGDVLL 72 Query: 78 IPARAANLPVNNKPVMLLSLVFAPTWLGLSF-YDSRTTSLLHPARQIQLPSLQRGE---- 132 I + + K +++ + F TW + +D S + + + R Sbjct: 73 INSNDLHCAYETKDLVMTVISFDSTWFIHNLRFDPELFSPFREMGKHYMNLIPRDHPAMG 132 Query: 133 -GEAMLTALTHLS--RSPLEQNIIQPLVLSLLHLCRSVVNMP-----PGNSQPRGDFLYH 184 ++L L ++ L+L L + + R Sbjct: 133 KLRSLLFELQEEHVGEQRSYATVVYSLLLQFLATVNRQCRIEGEGGSEPSISERQLEKMR 192 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 + ++ N+A P T E +A ++P+ S++F + M + Y+ +R+ +A +L+ Sbjct: 193 QVIMVMEQNFAHPWTLEELASLVYLSPSRFSEIFKRAVGMPPLLYLIHIRLEQAVTMLEG 252 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 H+ + +VA CGF F R+F++ G+TP + Sbjct: 253 GHMKVMDVALECGFRTLTNFNRLFKKHIGMTPKASQKQH 291 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 104/263 (39%), Gaps = 15/263 (5%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV--NNKPV 92 + + + + ++ G ++ + + +G++L I + K + Sbjct: 2 PNSYRNLSLHWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSM 61 Query: 93 MLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSL--------QRGEGEAMLTALTHLS 144 + SLVF +LG D+ T L+P + +L L E + +L Sbjct: 62 VSDSLVFHLDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECF 121 Query: 145 --RSPLEQNIIQPLVLSLLHLCRSV---VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 + + + L++ L L + + + + +++Q NY + LT Sbjct: 122 NGKQYGYELYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETLT 181 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 E ++ + + H F ++ M +EY+ R+ +A L + + ++A GF Sbjct: 182 IEELSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFR 241 Query: 260 DSDYFCRVFRRQFGLTPGEYSAR 282 + YF +VF+ +FG+TPG Y Sbjct: 242 NISYFNKVFKERFGVTPGSYRKN 264 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 105/279 (37%), Gaps = 17/279 (6%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 G NP + + +PV D + V +G+ + + + Sbjct: 11 HGTPENPFSQYHISDVKRAFQIPV--HWHDELEIIYVKQGKLHVTISGENYIGSPKDAFV 68 Query: 78 IPARAANLP-VNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL--PSLQRGEGE 134 + + +L + +F ++ D S+L P ++ +L Sbjct: 69 VSPGSLHLMGSPTGDADYYTFLFPLEYISFQTDDLMEKSILSPLKRGRLMISPQINDTAA 128 Query: 135 AMLTALTHLSRSPLEQNIIQ----------PLVLSLLHLCRSVVNM--PPGNSQPRGDFL 182 + L ++ +N + ++L+ R + N + Sbjct: 129 DICERLIEINEQISGKNAEKTDAANIEAQFETKITLIKFIRKMWRNGLILENGTNGTNTT 188 Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 + +++ NY + ++ + F+++ ++S+ F +H + +YV +R+ AR +L Sbjct: 189 EKEMITYIRQNYTREISLKEFGAQFHLSEKYISRYFKEHFHITLSQYVNHLRLEHARQLL 248 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 ++ S+ EVA G+ + YF R F++ +G++P +Y Sbjct: 249 EESTASVTEVAMCSGYQNVSYFIRSFKKMYGVSPLKYRN 287 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 101/270 (37%), Gaps = 12/270 (4%) Query: 22 LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 P + + + +L G L+ K V+ +++F+ + Sbjct: 16 EFPFEFHHIDHTHPR--YVMSYHWHVEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVHSG 73 Query: 82 AANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT 141 + + + +VF + ++ L E +L ++ Sbjct: 74 ILHSGIP-HDCVYQCIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSDEHPQILNCIS 132 Query: 142 HLSRSPLEQNIIQPL-----VLSLLHLCRSVVNMPPGNSQPRGDFL----YHSICNWVQD 192 L + E++ L L S ++ R D+ + +++ Sbjct: 133 VLFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVLEFIEK 192 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 NYA P+T + ++ +++P + + F++ ++Y+ R+ +A + L SI E+ Sbjct: 193 NYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEI 252 Query: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 A R GF D YF R F++ G+TPG+Y R Sbjct: 253 AYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 116/287 (40%), Gaps = 21/287 (7%) Query: 18 SGLVLNPQLLGRVWFASQPASLP----VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEG 73 + + +++ P + + + ++ +G ++++ G Sbjct: 10 NTRIDEKMHPVQIFQNRALQKKPGELILYLHWHEHFEIIVMQQGSAVFHIDSESYEAHPG 69 Query: 74 EMLFIPARAAN--LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQR- 130 ++LF+PA A + + + L++V+ + DS T + P + ++ + Sbjct: 70 DVLFVPAGALHVGYSLCEGDLSYLAIVYNSSLFQNWMQDSLHTKYVLPYLEGRVQLPVKP 129 Query: 131 -------GEGEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLCRS--VVNMPPGNSQPR- 178 + +L ++ P Q +++ + LL L + + P + + Sbjct: 130 TRLDPSCADYYYLLEQANSEFKAKQPAYQLMVKSQLHMLLTLLSRKFLPHQLPEQATNQY 189 Query: 179 --GDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMA 236 + ++ +++ N+A T A+ N+ +H K+F + FI+YV R+ Sbjct: 190 VHNREQFKALIEYIEANFADKQTVADAARRMNLNVHHFCKMFKKLTGRTFIDYVNVCRVN 249 Query: 237 KARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +A +L LSI E+A G +S+YF +++++ G+ P + + Sbjct: 250 EAERLLLAGDLSITEIAGCVGCDNSNYFTKMYKKYKGVAPSQLRKQL 296 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 95/296 (32%), Gaps = 26/296 (8%) Query: 12 FFADLFSGLVLNPQLLGRVWFASQPASLPVGS--LCIDFPRLDIVLRGEYGNLLEAKQQR 69 + G P + A+ PA P + + + +G + + ++ Sbjct: 9 LKENRLHGTAAFPCACYQADSAASPAGTPFLAKHHWHEELEIIYFEQGCFHLEINMEKYE 68 Query: 70 LVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQ--IQLPS 127 + E I + + + K ++ VF+ + L D L+ P + + LP Sbjct: 69 IEEECFCLIKSGDLHYIYSEKDYREMAFVFSLSMLRAFAADPVQEKLVQPLAEGSLSLPG 128 Query: 128 LQRGEGEAMLTALTHLSR----------------------SPLEQNIIQPLVLSLLHLCR 165 L + + + P L+ Sbjct: 129 LIYRQNPCFVILKREFLQIADAAGLPSGASNLRSQYRVSSLPQYMRAKASLLNIFAAFSE 188 Query: 166 SVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMR 225 + R +++Q++ + +T + +A N+ + + F + Sbjct: 189 QNLLAVSQMPADRRVDTVKKTLSYMQEHMTEKVTMQELAAQANMNEQYFCRFFKKIIGRP 248 Query: 226 FIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 I Y+ +R+ A +L++ S+ E+A GF + F R FR G TP +Y Sbjct: 249 PITYLNEMRIRYACRLLKETDHSVTEIALESGFNNLGNFMRTFRLVCGCTPLQYRK 304 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 109/282 (38%), Gaps = 13/282 (4%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 D F + R+W+ Q + + + + + Y + ++ Sbjct: 25 VVDSFETISFQKDSTIRIWYNEQNQNYDT--HWHNAIEIILPVENHYDVEASGQAYHILP 82 Query: 73 GEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ---LPSLQ 129 E+L IP+ + + +F + + + SL+ I P + Sbjct: 83 SEILIIPSGEMHALYAPESGKRFIFLFDVSSIAQMKGYTSIQSLMTSCLHITKTTYPQIY 142 Query: 130 RGEGEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLCRSVVNM------PPGNSQPRGDF 181 + ++ S E I L+ + + R+ +N + Q Sbjct: 143 NDVYQLLVQMRNEYFSSNEFRELAIYSHLINLFVSIGRNRINNVDLFPNTRSHKQKEYLQ 202 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 ++ + +++ +Y + LT +++A F + H ++LF Q+ F +Y+ + R+ A + Sbjct: 203 KFNEVLDYIDSHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFYDYLIYRRIKAAEEL 262 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 L LSI E+A + GF F R+F+++ G TP EY + + Sbjct: 263 LANPELSITEIALQSGFSSISTFNRIFKQKKGCTPSEYRSLY 304 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 93/255 (36%), Gaps = 6/255 (2%) Query: 32 FASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNN 89 +A S DF L +L GE +++E + L + + P + + Sbjct: 19 YAEGVNDNMTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKD 78 Query: 90 KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLE 149 P + L F+P + + Q LT + + Sbjct: 79 MPFKRIVLYFSPDLIANDTICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVPGKYHD 138 Query: 150 QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 I L LL++ R + R +++ ++Y + ++ +A+ + Sbjct: 139 AYICNQLNGLLLNMLRLDFEAVKSIPKTRS----AKAVDYIHNHYMEDISVNQLAEILYV 194 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 +P HL F I+Y+ R+ A+ ++ + +I ++++ GF + +F R F+ Sbjct: 195 SPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFK 254 Query: 270 RQFGLTPGEYSARFQ 284 + G+ P E +Q Sbjct: 255 KITGVAPREKKKLYQ 269 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 9/248 (3%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN--NKPVMLLSLVFA 100 + D + +L GE ++ + + G ++ I + + + + + + L F+ Sbjct: 31 NHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVHRTTDADTQDHVRVLLNFS 90 Query: 101 PTWLGLSFYDSRTTS--LLHPARQIQLPSLQRGEGEAMLTALTHL--SRSPLEQNIIQPL 156 +L S Y ++ I S ++ E +L + H +S Q +Q L Sbjct: 91 KDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLLDKMIHEIEHQSTGFQVALQAL 150 Query: 157 VLSLLHLCRSVVNMPPGN---SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 ++ LL + + + I ++ NY PLT SVAQ F ++ + Sbjct: 151 LMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINTNYQTPLTLSSVAQNFFVSQYY 210 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 LS+ F Q F+EY+ +R+ +A+ +L++ + + ++++ GF +F RVF+ Sbjct: 211 LSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVGFGSISHFGRVFKEVTR 270 Query: 274 LTPGEYSA 281 +P Y Sbjct: 271 FSPLNYRR 278 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 93/287 (32%), Gaps = 16/287 (5%) Query: 11 QFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 G V P V +V RG + +++ L Sbjct: 49 HLLEHRQHGDTTFHIRAYHVVLTPGPYQQTVNLHWHSEAEFIVVTRGSVCLQVGSERHVL 108 Query: 71 VEGEMLFIPARAANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL--- 125 +G++ + + P ++VF L D S L P +L Sbjct: 109 ADGDVALLSGGELHSMAAPGKGPSECKAIVFGLDLLEGPSSDRVQQSYLSPLASGKLLLP 168 Query: 126 --PSLQRGEGEAMLTALTHLSRSPLEQNIIQPL---------VLSLLHLCRSVVNMPPGN 174 + + + L + + EQ + L + L V + P Sbjct: 169 GAIAHDHPVRQYLAARLCEIVEALEEQPVGYELAVKGCLYDVLAQLFRAELLVEHSPRRE 228 Query: 175 SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 R ++ ++ + + L +A+ N++ H + F + + ++YV R Sbjct: 229 MDDRRADTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERR 288 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +A+A +L+ + SI + GF D YF +VFR TP Y Sbjct: 289 VARAADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRK 335 >UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN89_9FIRM Length = 286 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 116/281 (41%), Gaps = 6/281 (2%) Query: 6 LPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEA 65 +P S L P+L G + ++ + L+ ++ G +++ Sbjct: 1 MPVSIDIDQQEASPFELEPRLTGFYHWNRSIRTMHQHE---NCIELNFMISGNGTHIVGN 57 Query: 66 KQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL 125 + G+++ ++ + + + A T GL +R +LL P + Sbjct: 58 EICHTQPGDIIIYDSKVMHDESLMLDSLTDACCIAVT--GLKRPGARPNALLPPGLHPCI 115 Query: 126 PSLQR-GEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYH 184 P E + + P +++HL ++ + + + L Sbjct: 116 PCQSIAQELCTLYHIIERSLAKPHGYPAANAAAQTIVHLVWQQISERAVRAAGQENMLME 175 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 + ++++ +YA+ L+ +AQ F+ + ++++ F ++Y+R R+ KA+ +L Sbjct: 176 RVRSYIEQHYAEALSIRDIAQEFHASRDYIAHAFKHTTNYAPLQYLRRWRIGKAQTLLID 235 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 LS+ EVA R GF D +YF RVFR+ G+ PG + ++ Sbjct: 236 TDLSLTEVASRVGFDDPNYFSRVFRQVIGMPPGTFRRTWRA 276 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 102/281 (36%), Gaps = 14/281 (4%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 F VL + R++F ++ P + + ++ G + L +G++L Sbjct: 5 FEKTVLESEFPFRLFFNDGYSNTPH--HWHEDIEIIYLVEGTLKACINRDTYDLTQGDIL 62 Query: 77 FIPARAANLPVNNKPVM-LLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 I + K + F + ++ T ++ P + E A Sbjct: 63 IIGGGEIHCFFKEKKFSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHA 122 Query: 136 MLTALTHLS------RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL-----YH 184 ++ + + II+ + L + + +S+ Sbjct: 123 LMERHINEIINEYSKAEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMD 182 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 S+ +V NY + + + +++ + + +K F ++ + F++Y+ R+ KA + + Sbjct: 183 SVFQYVDTNYQERIDLDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIE 242 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 +I E+A CGF F R+F+ G TP +Y + Sbjct: 243 EDETIAEIAYNCGFNSIKTFNRLFKNIVGCTPMKYRRDNKN 283 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 92/250 (36%), Gaps = 11/250 (4%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVF-APT 102 + + + GE + EG+M+ I + ++ + + + Sbjct: 36 HWHEHLEILYFVSGEATLECGSTTFTAKEGDMIVINRNELHYGLSQSDHLFYYALIADFS 95 Query: 103 WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVL---- 158 L D+ + P Q +L R G L + + + Q L + Sbjct: 96 LLQSHSLDAPEMKFITPITQNRLIFENRISGADALAPMLSIIKELERQEFGYELAIKSEL 155 Query: 159 ------SLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 L +V+ + + + I +++++Y + L+ E ++ ++ Sbjct: 156 YRLLTLLLRGYVATVLTQDEYVERMKNVERFAPIFKYIEEHYREDLSVEQLSGMAGLSRF 215 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 H S+LF + EYV R+ +A +L++ L++ E+A GF D YF R F++ Sbjct: 216 HFSRLFKEISGRTVTEYVNETRLNRADYLLRESPLTVSEIAAATGFNDIYYFSRTFKKYK 275 Query: 273 GLTPGEYSAR 282 + P + Sbjct: 276 RMAPSALRKK 285 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 93/259 (35%), Gaps = 15/259 (5%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPV--MLLSLV 98 V +F + + +G+ ++ + EG+++ I + ++ +++ Sbjct: 36 VSLHWHEFMEIIYIKKGKGNVTVDFTTHYVEEGDIIIILPGHIHGISQHEGYSMEYENIL 95 Query: 99 FAPTWLGLSFYDSRTTSLLHPA--------RQIQLPSLQRGEGEAMLTALTHLSRS--PL 148 F+ +DS + P + + L + L Sbjct: 96 FSVDMFRSKNHDSLDSEFFLPLLAGDVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETPKG 155 Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHS---ICNWVQDNYAQPLTRESVAQ 205 ++ ++ + + + I +++ +NY + ++ +A Sbjct: 156 YHLALKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDIAS 215 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 + + +H + F + F+ Y+ R+ A +L S+ VA+ CGF + YF Sbjct: 216 YCGFSESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFN 275 Query: 266 RVFRRQFGLTPGEYSARFQ 284 R+F++++G+TP Y Sbjct: 276 RMFKKKYGVTPSRYRETHN 294 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 16/268 (5%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VN 88 ++ Q +G D+ V+ G + +G+++ + A + + Sbjct: 24 YYYKQWEDFHMGFHQHDWTEFMYVISGNCTVETNKDVIAMRKGDLIMLDAGVPHRLIVES 83 Query: 89 NKPVMLLSLVFA--------PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL 140 P +L++ F P+ L+ ++ + LL + + + Sbjct: 84 GSPCRMLNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRDYEDIQVNLRNLV 143 Query: 141 THLS-----RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRG-DFLYHSICNWVQDNY 194 L + + + L+ LL +V + NS R ++ Y Sbjct: 144 FELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHYVRQATEYIHQYY 203 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 + + +A N+ P +L ++F + EY+ +RM KA+M+L + + I EVA Sbjct: 204 DTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLLARTDVPIIEVAD 263 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 G YF +F++ G++P EY Sbjct: 264 HIGLNSRQYFSMLFKKMTGISPAEYRKS 291 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 121/283 (42%), Gaps = 13/283 (4%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG-NLLEAKQQRLVEGE 74 + + + L ++ F + + V + + VL G+ ++ +G+ Sbjct: 4 KYELIKNDDNLPIKIIFHTSDDAQLVPRHWHESIEISYVLSGKIDDIYIDGIHYTSEQGD 63 Query: 75 MLFIPARAANLP--VNNKPVMLLSLVFAPTWLGLSFYDSRTTSLL------HPARQIQLP 126 ++ I + A + V K ++ + +L ++ D + + +I++ Sbjct: 64 IVLINSNAIHSFSVVQGKNRKAVTFFISYEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIF 123 Query: 127 SLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGN----SQPRGDFL 182 + R ++++ A ++L L + L L++L + + + Sbjct: 124 NELRENLDSIIRAFSNLRDDSLAHIKVIGLSYELIYLLLKNFKISKKSFGEIKTKKYLDR 183 Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 I N++++NY+Q L+ + ++ FN++P +LS+ F ++ M Y+ VR+ K+ L Sbjct: 184 LTEITNYIKENYSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDL 243 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 SI E+A GFP+ F +VF+ + +TP +Y + + Sbjct: 244 MNTDQSITEIALEHGFPNEKSFNKVFKTFYNITPNQYRKKIKA 286 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 98/261 (37%), Gaps = 9/261 (3%) Query: 26 LLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL 85 L + F L V+ GE L + + G+++ IP + Sbjct: 19 RLLSISLVKDDKDWNSVFHTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYLEHT 78 Query: 86 PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSR 145 + K L V + + +T Q + + + + R Sbjct: 79 EQSVKGKSLEYYVIGIDKISFLAENGQTG------IQAFCNFRDQSSVSDIFAQMLYEMR 132 Query: 146 SPLEQNII---QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 + + I L + +L + RS +P + R I ++ NY + +T ++ Sbjct: 133 NDDYGSEIICQNLLEILILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERITLDT 192 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 + ++ +++ FA++ + I+Y+ R+ A +L+ S+ ++A GF Sbjct: 193 LTSLTHMNKYYMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQS 252 Query: 263 YFCRVFRRQFGLTPGEYSARF 283 YF + FR+ +G+TP +Y + Sbjct: 253 YFTQSFRKYYGMTPLQYRQQN 273 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 97/249 (38%), Gaps = 9/249 (3%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNK--PVMLLSLVFA 100 + L +L GE + +G M+ I + + + + + F+ Sbjct: 29 PHVHEGYELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLHRTSSTEVQEFERILINFS 88 Query: 101 PTWLG--LSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL---SRSPLEQNIIQP 155 ++ L R I ++ E ML + + E + Sbjct: 89 HDFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEMKKECKLKKEGHEDVVRAL 148 Query: 156 LVLSLLHLCRSVVNMPPGNSQPRG--DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 L L + RS+ ++P D I +++ ++ + +T + +A F I+P++ Sbjct: 149 LFQLLFTIYRSLAGGGRNQTRPLHPMDEKISEIASYINCSFQETMTLDGLAGQFYISPSY 208 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 LS++F + EY+R +R+ +A+ L+ I ++A GF +F +VF+ G Sbjct: 209 LSRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAADTGFKHISHFNKVFKEIVG 268 Query: 274 LTPGEYSAR 282 + P +Y + Sbjct: 269 IPPLQYRKK 277 >UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A5_CLOCE Length = 289 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 103/279 (36%), Gaps = 14/279 (5%) Query: 14 ADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEG 73 A F + N F + ++ + + +G + + E Sbjct: 6 ASNFEHISFNDITFPFNCFYIKNSN--TLPHWHNHFEMVFSQKGSCMVYINGSSFLVSEN 63 Query: 74 EMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL-----PSL 128 +++ IP + + ++V + D + +L P I S Sbjct: 64 QLIIIPPGSLHSIFPQGSCSYCAIVAGESLFEGLVADPHISEVLTPFMSIGFYPPLHLSE 123 Query: 129 QRGEGEAMLTALTHLSRSPL-----EQNIIQPLVLSLLHLCRSVV--NMPPGNSQPRGDF 181 + + + L R I+ ++ L + + + N P Sbjct: 124 KDRVFKKCFLLVHELQRENDQKRNGYGARIKSQMIILFSVLQESLPSEFFKKNKLPDSTR 183 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 L ++++ +Y++ +T ++ + +++ H S+LF F+EY+ R+ KAR I Sbjct: 184 LIKYSLDYLRIHYSERITVNDMSVYCHLSIQHFSRLFKACTGKTFVEYLTLFRLEKARKI 243 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 L + I ++ GF +S+YFCR++++ +G P + Sbjct: 244 LIGTDIPITQIPDLVGFCNSNYFCRLYKKYYGHPPSKDR 282 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 108/270 (40%), Gaps = 14/270 (5%) Query: 22 LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLL-EAKQQRLVEGEMLFIPA 80 LN L + + + F L V+RG + + + +++ I Sbjct: 11 LNRLKLLYIDSSRFDSDWHSTLHSHPFAELMYVVRGSGYFRFADNLKLPIQADDLIIINP 70 Query: 81 RAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL 140 + ++ L +V LG+ + T HP I + E + A+ Sbjct: 71 NVLHTECSDAEGGLEYIV-----LGIDGVEFYTEQNAHPGVSIHNYEDYKHEILFYIKAI 125 Query: 141 THLSRSPLE------QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNY 194 ++ E +N+++ LVL+ + S++++ D ++ +++ +Y Sbjct: 126 LEAGKTHDEMSELIVENLLRVLVLNTMRRTTSLLDVETSTGGDNKDCIFLE--HYLNLHY 183 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 + +T + +A + +LS +F + + I+Y+ RM +A+ +L LSI +++ Sbjct: 184 RENITLDHLASLTFLNKFYLSHIFKEQTGLSPIDYLLRKRMIEAKKLLINTDLSITQISD 243 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 GF YF + F+ ++P + + + Sbjct: 244 IVGFRSPSYFSQFFKNMECMSPSSFRNKHK 273 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 110/284 (38%), Gaps = 18/284 (6%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 +P + + ++P DF L IVL G +++ +++ + +G++ Sbjct: 6 LHYFTQDPSFPFFIQYGFHDDAMPEHFH-HDFFELVIVLNGTATHIVNSEEFFIKKGDVF 64 Query: 77 FIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 ++ + ++++++ P L D + + ++ ++ Sbjct: 65 VFNMDLSHGYKDPHNFKIINIMYKPERLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNT 124 Query: 137 LTA----------------LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 L+ + + Q +I + ++ + Sbjct: 125 LSLSISSLEYVAELGARINEEYKRKDQGYQTMIYARFMEMVVYLSRQY-IIENKLLHDTF 183 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 +++DNY P+ E +A +++ H +++F ++ + +R+ A Sbjct: 184 VHLAKAILFLEDNYLNPIKLEKLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACS 243 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +L+ +L I ++A GF DS+YF R F++ G+TP EY AR++ Sbjct: 244 LLKNSNLCIADIALESGFSDSNYFSRQFKKITGITPKEYRARYK 287 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 111/286 (38%), Gaps = 21/286 (7%) Query: 21 VLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 + + L + + +F L + +G + E + G++ I Sbjct: 11 LESEHFLFHIEPYELKQGTMIPLHRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEP 70 Query: 81 RAANLP--VNNKPVMLLSLVFAP--------------TWLGLSFYDSRTTSLLHPARQIQ 124 + ++ + +++++F P +++ + + S + ++ Sbjct: 71 GMDHAYTVEQSEGMEVVNVLFVPALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLT 130 Query: 125 LPSLQRGEGEAMLTAL--THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQP---RG 179 L Q + +L L + ++ Q +I+ ++ L + + +S P Sbjct: 131 LSPRQMMDIRGILEQLMKEYGNKESGYQFLIKSKLIELFIILSRIYANNRNHSLPSIQND 190 Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 + IC +++ + A PL+ E ++Q ++ + + LF Q M F+E+ R+ A+ Sbjct: 191 GEMIARICEFIKRHQAHPLSLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAK 250 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 +L I +A G+ D +F VF++ G TP Y R +G Sbjct: 251 QLLAASSDKIARIALDTGYEDLSHFNHVFKKLTGETPSLYRKRMKG 296 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 112/303 (36%), Gaps = 27/303 (8%) Query: 8 ADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQ 67 Q G P + S +L V D L + +GE+ ++ + Sbjct: 2 KKNQLKEIKKHGTAYFPCAFY--YTESDSENLIVKHHWHDQLELIHMKKGEFQVEIDMDK 59 Query: 68 QRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQ----- 122 + E + FI + + +N P ++VF L +DS SL+ P Sbjct: 60 HVVHEETICFINSEELHFIKSNHPCKESAIVFDLKMLSFDMFDSIQGSLIQPLLNGELKM 119 Query: 123 IQLPSLQRGEGEAMLTALTHL-------------------SRSPLEQNIIQPLVLSLLHL 163 + GE +L + + + + I L+ L L Sbjct: 120 PHFIFKKDKHGEEILKEYSEILEAYKISGQISQNPEGNITEKLSSQIKIKASLLKILAIL 179 Query: 164 CRSVVNMPPGNSQPRGD-FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHG 222 + + + N + +++Q+NY++ + + +++ N+ + + F + Sbjct: 180 YENNLLIKENNKNKDYRVEYIKTAISYIQNNYSEKIHIKDLSKQINMNEQYFCRFFKRMI 239 Query: 223 TMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 +EYV R+ KA+ +L++ + + ++ CGF + F +VF++ G+ P +Y Sbjct: 240 GKTPMEYVNEYRIKKAKELLRETNRQVMDICLECGFHNMGNFIKVFKKHTGINPMKYRKN 299 Query: 283 FQG 285 F Sbjct: 300 FIN 302 >UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME6_9FIRM Length = 323 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 112/283 (39%), Gaps = 14/283 (4%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVG-SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGE 74 + S PQ + + + + + G +E + G Sbjct: 37 MVSEYTYCPQTDFFIERLDRDKGPDMPSFHIHHKFEIYYEIAGTCRYFVEGAAYIVNAGS 96 Query: 75 MLFIPARAANLPVN--NKPVMLLSLVFAPTWLGL---SFYDSRTTSLLHPARQIQLPSL- 128 ++ I + + + P + + F+ +L +F + S L R L ++ Sbjct: 97 VVMIGENQIHKTASLGDSPSSRIVVNFSREYLEKVAAAFPEVDFFSFLTDERNHLLSAIT 156 Query: 129 --QRGEGEAMLTALTHLS-----RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF 181 Q+ +++L + L + ++ +L L G + Sbjct: 157 VKQQNHIQSILQQMLDLEGETSPEDQALRAMLLATLLLELKALCVQQQCQGGEKGRVSNH 216 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 + I ++ +YA+ LT +A F I+P +LS+LF + + IEY+ VR+ A+ + Sbjct: 217 IVEQIQAYIAQHYAEKLTLTGIASQFYISPYYLSRLFKKSTNLSLIEYINGVRIKAAQNL 276 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ++K SI VA + GF + +F RVF+ GL+P +Y +++ Sbjct: 277 IEKSGESISSVAGQTGFMTTAHFRRVFKDATGLSPQQYRQQYK 319 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 100/267 (37%), Gaps = 14/267 (5%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV--N 88 +A S V + + ++G + + L + +F+ + + Sbjct: 65 CYAENLKSYSVAWHWHEEFEYILAMKGPLTVDVNKTRVTLQTNQGVFLNSGILHAVEQAE 124 Query: 89 NKPVMLLSLVFAPTWLGL---SFYDSRTTSLLHPARQIQLPSLQRGEGE-AMLTALTHLS 144 +L S VF P +G F+ +L P + + +L L Sbjct: 125 KGEALLHSGVFHPRLVGGMDTIFWQKLIRPMLQPDAPAFFLLDEAVPWQAQVLACLREAW 184 Query: 145 RS-----PLEQNIIQPLVLSLLHLCRSVV---NMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 ++ +N ++ + + L L + + + +V+++YA+ Sbjct: 185 QAVAVEPFDYENRVRYYLSAALRLLSTQCVGGKTKVSQQEQIAAERMKQMLRFVEEHYAE 244 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 LT E +A ++ + + F Q + I+YV+ R+ KA +L+ L E+ C Sbjct: 245 ELTVERIAASVALSESACLRSFRQMLGITPIQYVKQFRVEKAAELLRSTRLKTGEIGMEC 304 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARF 283 GF D YF + FR TP EY A+F Sbjct: 305 GFADGSYFIKTFREIKHCTPKEYRAKF 331 >UniRef50_A7FN79 HTH-type transcriptional activator rhaR n=29 Tax=Enterobacteriaceae RepID=RHAR_YERP3 Length = 290 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 103/273 (37%), Gaps = 5/273 (1%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 L V ++ F + IV RG ++L R+ G++ Sbjct: 6 LLESRDYLLSEQMPVAVTNRYPQETFVEHTHQFCEIVIVWRGNGLHVLNDHPYRITCGDV 65 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQ---IQLPSLQRGE 132 +I A + + ++L ++++ P L L+ + L P + +L + + Sbjct: 66 FYIQAADHHSYESVHDLVLDNIIYCPERLHLNAQWHKLLPPLGPEQNQGYWRLTTQGMAQ 125 Query: 133 GEAMLTALTHLSRSPLE--QNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWV 190 ++ L SR + + L+L L + + I + + Sbjct: 126 ARPIIQQLAQESRKTDSWSIQLTEVLLLQLAIVLKRHRYRAEHAHLLPDGEQLDLIMSAL 185 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 Q + + L +LF Q M Y+R +R+ A+ +L+ I Sbjct: 186 QQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRIS 245 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 ++A RCGF DS+YF VF R+ G+TP +Y RF Sbjct: 246 DIAARCGFEDSNYFSAVFTREAGMTPRDYRQRF 278 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 103/272 (37%), Gaps = 14/272 (5%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 P V + + + ++ GE+ L + +L G++ FI A Sbjct: 18 PIAFYHV--SPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGIL 75 Query: 84 NLPVNNKPVMLLSLVFA-PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 + + +VF + L ++ S+ + ++ L E + T + Sbjct: 76 HGGTPI-DCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNLE-LQTVCNY 133 Query: 143 LSRSPLEQNIIQPLVLS------LLHLCRSVVNMPPGNSQPRGDFLYHS---ICNWVQDN 193 L S ++ + LV L + + P + + + + + ++ Sbjct: 134 LFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQQ 193 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 Y PLT E +++ +TP + + F I+Y+ + R+ + L + SI E+A Sbjct: 194 YPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIA 253 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 CGF D YF + F++ G+TP +Y + Sbjct: 254 LNCGFNDISYFIKTFKKYKGVTPKQYLKDYHA 285 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 91/260 (35%), Gaps = 7/260 (2%) Query: 26 LLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL 85 L V + +F + G +E + + +++ + + Sbjct: 43 TLLYVAISKYGTDWKSLPHSHNFAEFFYITNGSGQFSVEKEILDVKANDLIILNPTIVHT 102 Query: 86 PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSR 145 ++N + +V + D L A + L M S Sbjct: 103 EISNPSKPMEYIVLGIEGIKFQAEDQGYILLNSSAHKSDLHLYFNSLAHEMK------SE 156 Query: 146 SPLEQNIIQPLVLSLLH-LCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 P + Q L+ + + R+ S P+ + ++++NY + +T E+++ Sbjct: 157 QPYRNFVCQNLLNIIFTMILRNDAFKISIVSGPKLTRECNIAKKYIEENYQENITIETLS 216 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 ++ + F + I Y+ R+ ++ +L + S+ ++Q GF YF Sbjct: 217 SLVHLNKYYFVHNFKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYF 276 Query: 265 CRVFRRQFGLTPGEYSARFQ 284 + F+R +TP EY ++ Sbjct: 277 SQAFKRMTNITPQEYKKMYK 296 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 100/271 (36%), Gaps = 15/271 (5%) Query: 25 QLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN 84 + R+ + S + + GE + ++ G+++ + + Sbjct: 22 EFDRRIGYHSMDTT-----HYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVH 76 Query: 85 LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPAR-----QIQLPSLQRGEGEAMLTA 139 +V T LL I+L +R EA+ + Sbjct: 77 RTSELSQPNHERIVLHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFES 136 Query: 140 LTHLSRS--PLEQNIIQPLVLSLLHLCRSV---VNMPPGNSQPRGDFLYHSICNWVQDNY 194 L + P Q ++ + +L P I + ++ Sbjct: 137 LLRELQECPPGYQLHVRNMATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHF 196 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 +PL + +A+ F I+ HLS++F + F +Y+ R+ +A ++L++ SI ++++ Sbjct: 197 REPLPLDELAKQFFISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISE 256 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 RCGF + +F +VF+ GL+P +Y Q Sbjct: 257 RCGFENFSHFGKVFKELSGLSPRDYRKLEQN 287 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 101/287 (35%), Gaps = 20/287 (6%) Query: 15 DLFSGLVLNPQLLGRVWF---ASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLV 71 L + Q+L + + + D L + G L Sbjct: 12 SLKETITYESQMLHYGLYTAGYQRVFQADIPWHWHDEFELGYISGGSVVYQTSGLTVTLH 71 Query: 72 EGEMLFIPARAANLPVNNKPVMLLSLV---FAPTWLGLSFYDSRTTSLLHP---ARQIQL 125 EG+ +FI + + +P L F ++L S + P RQ++ Sbjct: 72 EGDGIFINSGVLHYLHPLEPCREARLQTQFFDKSFLAGSLGSLLDIKYVAPVLDQRQLEA 131 Query: 126 PSLQRGEGE-----AMLTALTHL--SRSPLEQNIIQPLVLSLL----HLCRSVVNMPPGN 174 L R + E L L + + ++ L L + P Sbjct: 132 VPLYRSDPESKGFLECLQKGVELCSRKEEFFELRLRNLFSELWESIYRWAAQKESSTPSL 191 Query: 175 SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 + D + +VQ ++++ ++ S+A I+ +LF + IEY+ VR Sbjct: 192 RRSIEDDRIKQMMRYVQAHFSEKISVSSIAASIPISERECYRLFQNSMGITPIEYLISVR 251 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + A+ +L + SI ++A GF S YF ++FR LTP +Y Sbjct: 252 LQNAQSLLMNTNKSILDIALETGFGSSSYFGKIFRSHHRLTPAQYRN 298 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 113/283 (39%), Gaps = 13/283 (4%) Query: 11 QFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 +F D+ G P + S + + + +L G + ++A + Sbjct: 5 EFKEDMVHGSTKFP--FAYYYVNSYHPRYHMITHWHKEYEIIRILSGTFNIKIDAVSYTV 62 Query: 71 VEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWL--GLSFYDSRTTSLLHPARQIQLPSL 128 G++LF+ + A + + LVF + L S ++ +L+H ++IQL Sbjct: 63 KTGDILFLNSGAIHSGIPV-DCTYECLVFDISSLLQQNSLVNTELNALIHYKKKIQLLFD 121 Query: 129 QR-GEGEAMLTALTHLSRS--PLEQNIIQPLVLSLLHLCRS----VVNMPPGNSQPRGDF 181 ++ G +L + + + Q I + L L + + Sbjct: 122 KKLGAVYDILNQMFEIMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIKEKEFSAINKKSLS 181 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 + +++ Y + ++ E +A+ + + K F + +EY+ R+ A Sbjct: 182 RIKKVLFFIETKYMENISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEK 241 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF-GLTPGEYSARF 283 ++ + SI +VA CGF D+ YF +VF++ G+TP EYS + Sbjct: 242 IKFFDSSITDVAYDCGFNDTSYFTKVFKKYNSGMTPREYSKLY 284 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 97/258 (37%), Gaps = 12/258 (4%) Query: 40 PVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP-VMLLSLV 98 + ++ + G + +++ + + + ++ ++ Sbjct: 30 NFPRHWHEHLQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLESTSDNLVFYTIR 89 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA------LTHLSRSPLEQNI 152 F P++L + D T L P ++ + LT + + ++ + Sbjct: 90 FEPSFLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIGYELA 149 Query: 153 IQPLVLSLL-HLCRSVVNMPPGNSQPRGDF----LYHSICNWVQDNYAQPLTRESVAQFF 207 I+ + L+ L R+ V S+ + ++ Y + +T +A Sbjct: 150 IKGYIYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSKLANTV 209 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 ++ +H + F Q +Y+ +R+ K+ L++ +I E+A CGF + +YF R+ Sbjct: 210 GLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNYFSRI 269 Query: 268 FRRQFGLTPGEYSARFQG 285 F++ +P +Y ++ Sbjct: 270 FKKYHSTSPSQYRNLYKN 287 >UniRef50_UPI0001789626 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789626 Length = 305 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 113/287 (39%), Gaps = 17/287 (5%) Query: 9 DQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLE---- 64 + F + P+ ++ Q + + D + ++ G ++ Sbjct: 2 NGSLFQQMLEEGDYVPR--FYAYYYKQWMNYEMPYHQHDSTEIMYMISGVCRIDVKAGDT 59 Query: 65 AKQQRLVEGEMLFIPARAANLPVNNK--PVMLLSLVFA--------PTWLGLSFYDSRTT 114 K L +GE + + A + + ++ +L++ F P+ + + + Sbjct: 60 EKSVILKKGEFMVLDAGVPHRLIVDQAASCRMLNVEFGFMESEGMAPSLRHIVGEEEEVS 119 Query: 115 SLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNII-QPLVLSLLHLCRSVVNMPPG 173 LL + + + Q + + + L + + ++ L + LL + Sbjct: 120 FLLKRPFRYLVLADQEEVYPVLKSLVLELDQRGTDGRMMTHALFIQLLVCIARLYEERER 179 Query: 174 NSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 + + DF +++ NY + + + VA N+ P +L ++F + EY+ + Sbjct: 180 SDMQQSDFYIKRSVDYLHQNYDRQIQVKDVAAEVNLHPGYLHRVFRRGTGRTITEYLTTI 239 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 RM KA+M+L++ + IHE++ G YF +F++ G TP EY Sbjct: 240 RMEKAKMLLEQTDIPIHEISDYVGVGSRQYFHMLFKKYTGSTPVEYR 286 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 96/259 (37%), Gaps = 10/259 (3%) Query: 37 ASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN---KPVM 93 + + L V G + + +G+++ I + + + Sbjct: 31 PNKNLVWHYHPEIELVYVNGGNGKRQIGSHVSYYTQGDLILIGSNLPHCGFTDACTGNTS 90 Query: 94 LLSLVFAPTWLGLSFYD-SRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI 152 + +LG F+ ++ + + G + + + + Sbjct: 91 ESVVQMKTDFLGSDFFSIPEMRNIRQLFEKAKGGIAFTGSAKKKIGEKIEILEYKSDFQR 150 Query: 153 IQPLVLSLLHLCRSV------VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQF 206 + ++ L L + +Q + + +SI N+V++NY +P++ E +A Sbjct: 151 LLAILNILNELGSTSEYQILNAEHLSVETQSKENERINSIFNFVKENYREPISLEEMADL 210 Query: 207 FNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCR 266 ++T + F + F+++V RM A +L + +SI E+ GF + +F + Sbjct: 211 THMTVPSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEICFESGFNNFSHFNK 270 Query: 267 VFRRQFGLTPGEYSARFQG 285 F+ G++P EY + + Sbjct: 271 SFKAFTGMSPSEYRNQLKS 289 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 98/251 (39%), Gaps = 9/251 (3%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN--KPVMLLSLV 98 + + + +G +E K+ L +GE LFI + + + + ++S V Sbjct: 40 IAWHWHKEIEIITIYKGTLYIEIENKKFTLKKGESLFINSEEMHFMRMDAREECRIISFV 99 Query: 99 FAPTWLGL---SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSP--LEQNII 153 F + S D + L +++ L + + ++ + E I Sbjct: 100 FDKVLICGEKGSKIDQKYIIPLINCKELSALELTEEDSQKLIQGYFSYADEILGYEIVIR 159 Query: 154 QPLVLSLLHLCRSVVNMPPGN--SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITP 211 L LL++ R + + S + ++ NY++ ++ +A+ I Sbjct: 160 NVLSEILLNIVRENQELLEKSNGSNNTDRERMKYMLTFIHKNYSEDISLGDIAKEAFIGE 219 Query: 212 NHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQ 271 + FA+ IEY++ R+ A +L+K L + E+ + GF YF +VF R Sbjct: 220 REALRCFARTIGTSPIEYLQKYRIYTAAELLRKSELPVTEICLQAGFNSPSYFSKVFCRM 279 Query: 272 FGLTPGEYSAR 282 G+TP EY Sbjct: 280 LGMTPREYRKN 290 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 102/247 (41%), Gaps = 12/247 (4%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPT 102 S D+ L + GE ++++ + + GE L + + ++ F Sbjct: 23 SHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQE-----NVPFKRL 77 Query: 103 WLGLSFYDSRTTSLLHPARQ----IQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVL 158 + S + + LL + + ++ ML L P Q + + Sbjct: 78 LVYFSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDP--QAYHEDYIH 135 Query: 159 SLLHL-CRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKL 217 +LL++ ++ +P + +++ NY + ++ + +AQ ++P +L + Sbjct: 136 TLLNMALLTIARNIQTPVKPEKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPYYLCRE 195 Query: 218 FAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPG 277 F ++ I+YV R+ A+ + + + +I E+++ GF + +F RVF+ G+TP Sbjct: 196 FKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMTPS 255 Query: 278 EYSARFQ 284 + ++ Sbjct: 256 NFRKMYK 262 >UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ07_CALS8 Length = 283 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 9/275 (3%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 + L ++ + +S + D L V +G +E ++ L G++ Sbjct: 1 MIEMLNNIMPVIVKTLERVHDSSWKMDYNVHDSYELIFVKKGNIEFWVEDEKIELRAGDL 60 Query: 76 LFIPARAANLPVNNKPVMLLSLV----FAPTWLGLSFYDSRTTSLLHPARQIQLP----- 126 L I + +V P L I P Sbjct: 61 LIIKPHTRHKFEVVGNFKAEFIVMGFYLKPESKSKIEALKEIYGFLESLENISSPFYFIH 120 Query: 127 SLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSI 186 +R L ++ ++ + ++ + L +N + I Sbjct: 121 IRKRSNVFFCLESILQEAKENKKGLLLYIKSIELFIYITREMNNLEIKKGFDYSKIAKFI 180 Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 +++ NY + + +A+ ++ + +S+LF + EY+ R+ KA+ L + Sbjct: 181 KDYIDQNYMEDIKIGDIAKKLFMSESSISRLFKSQFGILPKEYLLSKRIEKAKEYLSVSN 240 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 L I E+A CGF F +F++ G +P Y Sbjct: 241 LKISEIAIMCGFSSLQRFNDIFKKYTGCSPTHYRK 275 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 102/278 (36%), Gaps = 17/278 (6%) Query: 23 NPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 N QL V+ S S D +L G ++ K + G+ + IP + Sbjct: 17 NMQLPLEVYNVEFRNSADFYSHWHDEMEFIYILNGSAEICIDFKIFSVTTGDFIIIPNGS 76 Query: 83 ANLPVNNKPVM--LLSLVFAPTWLGLSFYDSRTTSLLHPA--------RQIQLPSLQRGE 132 + + + ++LVF + + + D + ++P I+ ++ + Sbjct: 77 IHYMIGKENSKISYVALVFNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVGHAK 136 Query: 133 GEAMLTALTHLSRSPLEQNIIQ---PLVLSLLHLCRSVVNMPPGNSQPRGDFL----YHS 185 + + ++ L + + NS+ D + Sbjct: 137 IVNSFNNIIESYNNKSYGFQLEIKGSLFSIFSTIFKEGYISLNLNSENYSDLIKVENLKE 196 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + ++Q NY P++ + +A + H + F +Y+ + R+ KA ++L Sbjct: 197 VIKYIQTNYKNPISIKELADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATLLLFDT 256 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +LSI E+A GF D YF + F++ ++P +Y Sbjct: 257 NLSITEIAYEVGFGDVSYFIKTFKKFLSISPTKYRKSN 294 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 105/274 (38%), Gaps = 13/274 (4%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 G P + + P + + D + V +G ++ ++ +G + Sbjct: 11 HGTREYPFCEYHMRYF--PHAFQIPVHWHDEMEIIYVRKGPLTVEIDGQKFTGEDGSVFI 68 Query: 78 IPARAANLPV-NNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 ++ + PV + +F ++ D+ + P R + Sbjct: 69 ASPGVLHMMSAPDTPVDYFTFIFPLEFISFQTKDALEDEVFFPLRNHTRGFRPEVADRKL 128 Query: 137 LTALTHLSRSPLEQN---------IIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSIC 187 L L + +E+N ++ +L ++ L + L I Sbjct: 129 LGKLIPILDELVEENGKMGTHRQIQVRIRLLQMMDLLVEYSQLEELTR-NASGELEKEIL 187 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 ++QDNY + +++ F+++ ++S+LF++ M +YV +VR+ AR +L+ L Sbjct: 188 LYIQDNYHDNIGLAELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVRLRYARHLLESTDL 247 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 S+ E+A + G+ + YF R F G +P Y Sbjct: 248 SVTEIAMKSGYQNVSYFIRRFSSAMGESPLRYRN 281 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 108/294 (36%), Gaps = 22/294 (7%) Query: 8 ADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLL-EAK 66 + F+ F+ L N + P + L V G NL + Sbjct: 38 KENGFYNISFNRLKENIAVTMH--GPPDPFDAEGLMHNHGYFELVYVYHGSCVNLFPNQE 95 Query: 67 QQRLVEGEMLFIPARAANLPVNN-KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL 125 + L +G++L + A + P + + ++V P S + + L + Sbjct: 96 RIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVLKPKLFEKSMLSLLSDNPLFSNFFVNY 155 Query: 126 PSLQRGEGEAML----------TALTHLSRSPLEQNIIQ------PLVLSLLHLCRSVVN 169 + ML + ++ + + L++ L R Sbjct: 156 MYRVNKARDYMLFHTNGEKRIAQTMENIITELYSKEMCYRRAAEAELIVLFTCLARIYKE 215 Query: 170 MP-PGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIE 228 + I ++ +N++Q T +SVA F + ++LS++ +H F E Sbjct: 216 QLGLKGFDEVKNKQVTDIITYMDENFSQA-TLQSVADHFGYSTHYLSRMIKKHTNKNFSE 274 Query: 229 YVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + ++ A L+ + + E+A+ GF D+ YF +VF++++G +P EY + Sbjct: 275 IIHSFKLENACTYLETTDIPMREIAELVGFNDASYFHKVFKQKYGQSPAEYRKQ 328 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 102/258 (39%), Gaps = 19/258 (7%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN---LPVNNKPVMLLSLVF 99 DF + +L G + + + EG+++ + + + P + Sbjct: 32 YHSHDFIEMAFILSGHGKYKIADRLYDVSEGDIIILNPGQKHQALCTDPSNPATEFFVGL 91 Query: 100 APTWLGLSFYDSRTTSLLH-------PARQIQLPSLQRGEGEAMLTAL---THLSRSPLE 149 G + L + + R + + TA+ + RS Sbjct: 92 CDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAMSVENDVCRSGRY 151 Query: 150 QNIIQPLVLSLLHLCRSVVNMPPGNS-----QPRGDFLYHSICNWVQDNYAQPLTRESVA 204 + L+ L+ L R N+ ++ I N+ +D+Y++ ++ + +A Sbjct: 152 IMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFEDHYSEKISLDQIA 211 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY-HLSIHEVAQRCGFPDSDY 263 + ++P ++S++F I ++ +R+ KA+ +L+ SI EVA + G+ D + Sbjct: 212 ENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQEVAAKVGYDDVYH 271 Query: 264 FCRVFRRQFGLTPGEYSA 281 F ++F+++FG+ P + Sbjct: 272 FSKLFKKRFGMPPSKIRR 289 >UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQS2_9FIRM Length = 291 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 99/275 (36%), Gaps = 14/275 (5%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 + R++ + P+ + ++ Y + + L ++LF Sbjct: 10 ETVNFTLASNIRLYHNNSAEDFPLHWHVPG--EIICPIQNTYNVTVADEILYLKPHDILF 67 Query: 78 IPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAML 137 I + + K L F+ + + LHP R ++ Q + +L Sbjct: 68 IGSGELHSITAPKEGERYILNFSTAMFEQFHELALFFAALHPFRLLRY-QDQPQFNDQLL 126 Query: 138 TALTHLSRSPLEQNI-----IQPLVLSLLHLCRSVVNMPPGN------SQPRGDFLYHSI 186 +T + + + + L+L + ++ + Q + + Sbjct: 127 ALMTRMEKEYFGAAVFRDCELSSLMLHFFAVIGRKLHQNAPHENISPLRQKEQQERFSML 186 Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 CN++ + + L+ + +A + H ++LF + Y+ R+ A+ +L + Sbjct: 187 CNYINAHCTEDLSLDELANEAGFSKYHFARLFKEITGTTCHNYLLGRRLLFAKTLLADFS 246 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 L I EVA R GF F R+F+ Q G TP E+ Sbjct: 247 LPITEVAMRSGFNSLATFNRIFKFQIGCTPSEFRK 281 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 95/276 (34%), Gaps = 6/276 (2%) Query: 8 ADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQ 67 AD Q G L P L V + +P D + +G Y + +Q Sbjct: 4 ADTQLKEQKDHGTSLFPCALYEVCEEKNWSGVPH--HWHDEMEILYFSKGSYTLFVNMEQ 61 Query: 68 QRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPS 127 ++ E FI + V + +LVF P+ LG + + Sbjct: 62 FQIEEKCFYFIYPGELHAIVPHSDSTESALVFHPSLLGF---EYKLFPQCLKPSNPAFSP 118 Query: 128 LQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD-FLYHSI 186 ++ + S + IQ + + + + ++ + + Sbjct: 119 FEKEYRKVFHIFHQFPEDSLSARLFIQSGIFKMAGILSTFPSLLQTERKTDMRIETIKTA 178 Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 +++ +Y + L +A N+ + + F + I Y+ R+ +A ++LQ Sbjct: 179 LDFLHSHYQEKLYIRDLALQVNMNEQYFCRFFKKVLGKSPITYLNEYRIKQACILLQTTD 238 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L I EV CGF F + F++ TP +Y + Sbjct: 239 LPIMEVGMDCGFFHLGNFMKEFKKYTETTPLQYRKK 274 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 102/267 (38%), Gaps = 8/267 (2%) Query: 24 PQLLGRVWFAS---QPASLPVGSLCIDF-PRLDIVLRGEYGNLLEAKQQRLVEGEMLFIP 79 ++ + +A + S D + +V G+ + + G++L Sbjct: 8 EEIQSHLLYAGKVSDTPNWNFPSHKHDDLHEIIVVCGGQGMFTIGGQSYSASGGDILVYN 67 Query: 80 ARAANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAML 137 + + + P++ F+ S + R ++ + ++ Sbjct: 68 KGVLHEEQSSIDNPLITYYCGFSLPKASPSEDWVIPPDVEPVIRSSRVFPEIEALMKMIV 127 Query: 138 TALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQP 197 + + I + L+ S++ L R V Q L I +++ N+ Q Sbjct: 128 D--ESSIKEDGYEGISRYLINSVILLLRRAVRNQQHIKQESNTGLAEQIKDYIDRNFTQN 185 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 ++ + + + F++ P ++S +F H + I Y R+ +A +L + + EVA+ G Sbjct: 186 ISLKDLGRQFHVNPYYISHVFKDHYRISPINYAIHRRIGEATRLLVTTEMKVWEVAKLLG 245 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + + +YF +FRR GL+P + Q Sbjct: 246 YDNPNYFSIIFRRVTGLSPNRFRESNQ 272 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 112/268 (41%), Gaps = 14/268 (5%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VN 88 ++ +S + + + V+ G + + + L + + +FI A + N Sbjct: 29 FYEENLSSYSIPWHWHEDFEIIWVISGSIKVSVNSTEHILNKNQGIFINAGFLHSIHATN 88 Query: 89 NKPVMLLSLVFAPTWLGL--SFYDSRTTSLLHPARQ---IQLPSLQRGEGEAMLTALT-- 141 + +L S+VF P +G S Y + + I L + + + +++ Sbjct: 89 DGEYVLRSIVFHPRLIGSIDSIYWQNYIEPIIQNKNLPYILLDPFINWQDKILAYSISVW 148 Query: 142 ---HLSRSPLEQNIIQPLVLSLLHLC--RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 + + + E + L +L + S+ P R ++ ++Q ++++ Sbjct: 149 NRLYNTENGFEIYVRNELSQLILIVLTNHSICEAKPSIRNLRNADRIKTMLQYIQMHFSE 208 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 +T ++A+ I+ + + + F + +Y++ R+ KA +L ++ ++A +C Sbjct: 209 TITISTLARVALISESEVLRCFHRTIHSTPNQYLKQYRIQKACQMLIDTDMTSIDIAFQC 268 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 GF S YF + FR Q G TP EY R Q Sbjct: 269 GFQSSSYFTKTFREQIGCTPLEYRKRDQ 296 >UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWT0_CLOB8 Length = 263 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 106/261 (40%), Gaps = 5/261 (1%) Query: 20 LVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIP 79 N + + + + + V+ G + Q L GE+ Sbjct: 5 FEANKSGDQNFFSSKILENFSFPPHLHPYVEIAYVIEGSIEVTINDTQCCLKAGEVSICF 64 Query: 80 ARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA 139 + ++ ++ +F+P L SF+ R L + ++ ++L Sbjct: 65 PNDIHTFNSDGFSKIILFIFSPD-LTRSFFGIRMDKTLENPFMSK--NIVDDGISSLLYM 121 Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 L +S + +I+ L+ ++L S + S + ++ +++ +Y + ++ Sbjct: 122 LHDEYKSVNNKYVIKGLLYTILGKLDS--HFTFKKSSTFYNSTMQNLLKYIEIHYHEKIS 179 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 +S+A+ + +LS++F+ +F +Y+ +R+ KA+ +L + L + +A CGF Sbjct: 180 LDSIAKDLGFSKFYLSRIFSNKIGYQFNDYINRLRINKAQKLLSETDLPVTIIALECGFE 239 Query: 260 DSDYFCRVFRRQFGLTPGEYS 280 F R+F+ LTP ++ Sbjct: 240 SQRNFNRIFKELTALTPTKFR 260 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 104/279 (37%), Gaps = 12/279 (4%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 F P+ R++ L ++L+ E + + G+++ Sbjct: 5 FEAFQPLPESSFRIFGYE-VKEFDAPWHYHPEYELTVILQSEGIRYVGNSMESFEAGDLV 63 Query: 77 FIPARAANL----PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQI-----QLPS 127 + + P + P + + + ++G + + + Q+ + Sbjct: 64 LLGPNLPHCWKNTPDSVGPASSIVVQWPAEFMGSGWLNVEEFKSIRRLLQLATQGVRFNQ 123 Query: 128 LQRGEGEAMLTALTHLSRSPLEQNIIQ--PLVLSLLHLCRSVVNMPPGNSQPRGDFLYHS 185 ML A+ + P ++ L+ ++ + + ++ Sbjct: 124 EVSARVLPMLAAMLDMQPFPRLMKFLEILELLATVKSIHLLCEQGFTHPLNYEDNQRINT 183 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + N+++++YA+ +T ++A +++ S+ F++ ++ R+ A +L + Sbjct: 184 VYNYIREHYAERITLATLAGLVHMSEESFSRFFSRTMQKPLFTFLNEYRINMASKMLIET 243 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + + E++ CG+ +F R FR+ G+TP Y +F+ Sbjct: 244 DMQVAEISFACGYESPPFFFRQFRKFGGITPAAYRNQFR 282 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 100/243 (41%), Gaps = 8/243 (3%) Query: 44 LCIDF-PRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV--NNKPVMLLSLVFA 100 D L +V +G +++ ++ +G ++ +R + + ++ + Sbjct: 2 HEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNLVTYCIAIG 61 Query: 101 PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL 160 + D P + ++ E +++ A+ ++S E I L ++L Sbjct: 62 GLRIDGLPADHLLPDGYCPVQPLR---QHFAEVQSLFDAIEKEAKSHAE--IANYLTMAL 116 Query: 161 LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQ 220 + + + + + L ++ NY + + +A + +LS LF Sbjct: 117 ITKLAAFLREEGLQEEQQTPTLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHLFKA 176 Query: 221 HGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + ++YV R+ +A+ +L ++I ++A + G+ +S+YF VF+ +TPGEY Sbjct: 177 EIGLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPGEYR 236 Query: 281 ARF 283 ++ Sbjct: 237 RKW 239 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 7/262 (2%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 P L ++ F L VL G ++E + + + ++ I Sbjct: 2 PYRLLYSSYSKYEQDWESYPHTHYFSELFYVLNGCGSFIVEEESFPIRKQNLIIINPSIR 61 Query: 84 NLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL 143 + V++K L +V L Y+ + + +L + Sbjct: 62 HTEVSDKNSPLEYIVLGVEGLNFLIYNDKEYLNIQCE---DFSENLDFYFHTILREMDE- 117 Query: 144 SRSPLEQNIIQPLVLSLLHLCRSVVNMPPG--NSQPRGDFLYHSICNWVQDNYAQPLTRE 201 + + I Q L+ +L+ P S + ++ N+ + +T + Sbjct: 118 -QKESYETICQNLLEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENITLD 176 Query: 202 SVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDS 261 ++A+ ++ + + F + + + Y+ R+ ++ +L L+ +A++CGF S Sbjct: 177 TLAELTHLNKYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFSSS 236 Query: 262 DYFCRVFRRQFGLTPGEYSARF 283 YF + FR+ G+TP Y +F Sbjct: 237 SYFSQCFRKICGMTPTAYRKQF 258 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 98/269 (36%), Gaps = 9/269 (3%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 L L + F+ F L V+ GE +Q L G+++ Sbjct: 11 EDLQNLNAKLLSIAFSKDEGDWKSIMHTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVI 70 Query: 78 IPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAML 137 IP + +++ L V + R Q+ + Sbjct: 71 IPPYTEHTERSSQNHPLEYYVLGIDGISFLSQKDRE------CAQVFCNFEHDPSIHELF 124 Query: 138 TALTHLSR--SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQP-RGDFLYHSICNWVQDNY 194 + + R Q I Q L+ L+ + P + R I ++ NY Sbjct: 125 RQMLYEIRTAQYGSQTICQHLLEILILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNY 184 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 A+ +T +++ ++ ++ F ++ + I+Y+ R+ +A+ +L+ + SI ++A Sbjct: 185 AEHITLDTLTGLTHMNKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIAS 244 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 GF YF ++FR+ F +TP +Y Sbjct: 245 STGFSSQSYFTQIFRKNFNMTPVKYRQEH 273 >UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax=Enterobacteriaceae RepID=RHAS_SHIF8 Length = 278 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 103/270 (38%), Gaps = 3/270 (1%) Query: 15 DLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGE 74 + + P V + DF + IV G ++ + + G Sbjct: 2 TVLHSVDFFPSCNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGGT 61 Query: 75 MLFIPARAANLPVNNKPVMLLSLVF-APTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEG 133 + F+ +L + + L ++++ +P ++ + + Sbjct: 62 VCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSVL 121 Query: 134 EAMLTALTHLSRSPLEQNI--IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQ 191 + + + + + E ++ + + L + + + + W++ Sbjct: 122 QQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWLE 181 Query: 192 DNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHE 251 D++A + ++VA F+++ L + Q + Y+ +R+ KAR +L+ S+ + Sbjct: 182 DHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVTD 241 Query: 252 VAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +A RCGF DS++F +FRR+F +P + Sbjct: 242 IAYRCGFSDSNHFSTLFRREFNWSPRDIRQ 271 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 103/270 (38%), Gaps = 11/270 (4%) Query: 22 LNPQLLGRVWFASQPASLPVGSL---CIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI 78 + + + P+ S D ++ + G +E + L G+ Sbjct: 13 FRESPDLYLCYWGKERCAPLHSFGPGVRDIYKIHFIHSGRGIVKVEGETFELTGGQAFLA 72 Query: 79 PARAANLPVNNK--PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 ++ P + F + +R T + + + + + + Sbjct: 73 YPERVIFYQADEVDPWTYSWIGFNGEQVAEILSRTRLTP---ASPVLPMDTHLMPQLYEL 129 Query: 137 LTALTHLS--RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNY 194 L + R Q ++ + L+ L + + +Q + D H +++ +Y Sbjct: 130 LNEAEESNTTRDLRLQTLLYEFMTLLVELVPASGDADSTRTQAK-DAYIHRCLDFLHSHY 188 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 ++ ++ +A + +LS LF + M +Y+ RM KA +L+ H SI EVA+ Sbjct: 189 SEEMSVGQLAAIVGLDRKYLSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVAR 248 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 G+ D+ F ++F++ G +P +Y ++Q Sbjct: 249 SVGYQDALLFSKMFKKTVGTSPSDYREQWQ 278 >UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=C6D4D7_PAESJ Length = 289 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 113/281 (40%), Gaps = 17/281 (6%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 + + Q L + + + + DF L IVL G +++ + + +G++ Sbjct: 6 LNWFTSDEQFLFYIGYGGHDEDMYLHDHV-DFSELVIVLNGNATHIVNTEVSFIKKGDVF 64 Query: 77 FIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ------------ 124 I ++ + + ++++ P L + D RT+ ++ Sbjct: 65 VIDGATSHAYKDPHDFRICNIMYRPDILTSAGPDLRTSIGYQALFVLEPFYRNIQPFNSK 124 Query: 125 ----LPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD 180 +PSL+ A + ++ Q +++ + L+ Sbjct: 125 LSLPIPSLEYVSSLAAFMIEEYTNKLQGYQTMLRSRFMELVVYLSRQYQNQDQQGIQGNL 184 Query: 181 FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 + ++++D+Y +PLTRE +A I+ HL+++F + Y+ +R+ A Sbjct: 185 MHLANAISFMEDHYLEPLTREQIADKSGISVRHLNRIFQSYYPTTPFAYLLRLRLEHACH 244 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +L+ + I EV+ + GF DS+YF R F + +GL P Y Sbjct: 245 LLKTTPVPITEVSYKSGFNDSNYFTRQFTKVYGLAPKVYRR 285 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 7/261 (2%) Query: 26 LLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL 85 + V F S + G D + ++ G+ + L G+ + + Sbjct: 20 SVYNVGFQSCDSLYQWGPGIRDHYLIHYIISGKGRYTVNGSVHTLTPGDAFLVYPNTEVI 79 Query: 86 PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLS- 144 + + TW+G + D+ T + G + L H+ Sbjct: 80 YQADAQDP-----WEYTWVGFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYD 134 Query: 145 -RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESV 203 R +N ++ L V Q + ++ NY+ P+T E + Sbjct: 135 ARGTEFENALEMTGRLYTTLALFVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDI 194 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 A + ++ +HL + F + EY+ R+ +A +L+ LSI +A GF +S Y Sbjct: 195 ASYIGLSRSHLFRSFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLY 254 Query: 264 FCRVFRRQFGLTPGEYSARFQ 284 F + F + GL+P EY ++++ Sbjct: 255 FSKTFHKIKGLSPKEYRSKYK 275 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 93/270 (34%), Gaps = 16/270 (5%) Query: 28 GRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV 87 V P V +V RG + +++ L +G + + + Sbjct: 22 YHVVLTPGPHQQTVNLHWHSEAEFIVVTRGSVCLQVGSQRHVLADGGVALLSGGELHSMA 81 Query: 88 N--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL-----PSLQRGEGEAMLTAL 140 + P ++VF L D S L P +L + + L Sbjct: 82 SPGKGPSECKAIVFGLDLLEGPSGDRVQQSYLSPLASGKLRLPGAIAHDHPVRPHLAARL 141 Query: 141 THLSRSPLEQNIIQPL---------VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQ 191 ++ + EQ + L + L V + P R ++ ++ Sbjct: 142 CEIAEALEEQPVGYELAVKGCLYDVLAQLFRAKLLVEDSPRREMDDRRADTLKAVLTYID 201 Query: 192 DNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHE 251 ++ + L +A+ N++ H + F + + ++YV R+A+A +L+ + SI Sbjct: 202 EHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAADLLKDPNRSITA 261 Query: 252 VAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + GF D YF +VFR TP Y Sbjct: 262 IGMDLGFHDVSYFIKVFRSYKHCTPLAYRK 291 >UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NB22_9BACT Length = 297 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 105/266 (39%), Gaps = 17/266 (6%) Query: 33 ASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPV 92 A L DF L I+ G +++ + + G++ I A+ + V Sbjct: 31 AQHLHDLTTEPHRHDFAELVIITAGNGVQVVDGGEYAVSLGDVFLIQGNGAHYFLERNRV 90 Query: 93 MLLSLVFAPTWLGLSFYDSRTTSLLH--------------PARQIQLPSLQRGEGEAMLT 138 ++++++ P L L F R + ++L + + E ++ Sbjct: 91 SMINVLYDPARLPLPFGWLRRLPGYNVIFELEPSVRSAETFKHHLKLSAAELAEAVEIVG 150 Query: 139 ALTHLSRS--PLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 L P + +L L+ + PP + I + ++ + + Sbjct: 151 KLERELEQDTPGAELAAFQRLLELIVFISRCYDAPPAENLAAV-MRVGRIISLLESEFMR 209 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 E +A+ +PN+L +LF ++Y+ VR+ +A L+ ++ E+A C Sbjct: 210 EWRLEELAKLAATSPNNLLRLFRTVTGTSPVDYLIRVRLRRAAEALKNTPGAVAEIAADC 269 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSAR 282 GF DS+YF R FR +G++P E+ R Sbjct: 270 GFADSNYFARKFRAAYGVSPREFRKR 295 >UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L4_PAESJ Length = 287 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 101/286 (35%), Gaps = 16/286 (5%) Query: 11 QFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 Q F P L V+ ++ + D+ + V G + + Sbjct: 2 QTIHKRFEETDKFPFSL--VYRDTKSPQRELPDHLHDWYEIVFVYSGTGTFFINHSFYEM 59 Query: 71 VEGEMLFIPARAANLPVNNK--PVMLLSLVFAPTWLGLSFYDSRTTSLL-------HPAR 121 G+ IP + ++ PV ++ FAP ++ + + L + Sbjct: 60 NPGDAFLIPGNTVHRAFPDEFSPVTSSAIFFAPRFIQPMEFGESHSLLRCFEQARKSKSY 119 Query: 122 QIQLPSLQRGEGEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLCRS--VVNMPPGNSQP 177 +++ +R ++ + +R P + I + L + S Sbjct: 120 KLETSPDKREAFSGLIDVMNEEWLNRLPSYRAAIAVRLYDFLIALNRMALTETEHTRSSS 179 Query: 178 RGDFLYHSICNWVQDNY-AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMA 236 +I +++ + +Q ++ ++ ++T H S++F QH M EY+ ++ Sbjct: 180 AEPSWIRTILDYIDAHIGSQEMSLADLSSKASVTYAHFSRVFKQHTGMNVSEYILIKKIM 239 Query: 237 KARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 A+ L +I V CGF YF + F+ G+TP EY Sbjct: 240 LAKEKLMLTGDTIASVCLACGFESESYFYKKFKLITGMTPVEYRRS 285 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 95/281 (33%), Gaps = 17/281 (6%) Query: 19 GLVLNPQLLGRVWFAS--QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 N RV + G +L G Q + G+++ Sbjct: 17 EYARNNDFPFRVDYEEITNYIGYSFGCHWHPEVEFTYILSGSMIYQANNTQHLVKAGDVI 76 Query: 77 FIPARAANLPVNNKPV--MLLSLVFAPTWLGLSFYDSRTTSLL--------HPARQIQLP 126 F+ + + ++ F PT + + P + Sbjct: 77 FVNQNCLHSGKASNDCSCRYFAITFNPTLISGYKSSIFENKYIGEIINSDRIPFVYFEGS 136 Query: 127 SLQRGEGEAMLTALTHLSRS--PLEQNIIQPLVLSL-LHLCRSVVNMPPGN--SQPRGDF 181 + + ++L L L R + +I+ + L +L R V P Q + Sbjct: 137 KKENEQIVSLLMRLEELYREKAEGYELLIESKLFELWFYLYRDVYCKVPDELIKQTKNIM 196 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 + +++ DNY + LT + +++ N++ + +LF + Y+ R+ ++ Sbjct: 197 QIKAALDYIHDNYKENLTLDDISEACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQRSIPY 256 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L ++I E A GF S Y+ +F++ TP EY Sbjct: 257 LLSEGMNITEAALSVGFSSSSYYSEIFKKYMKCTPTEYKNN 297 >UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP2_9CLOT Length = 327 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 116/281 (41%), Gaps = 16/281 (5%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 + +N L + A QP + P+ F V G++ ++++++ L + +++ Sbjct: 44 HEEVAINVHHLPSWYGAPQPNTHPMKPHKHIFFEFVYVYSGQFHSVVDSESLVLGQDQVI 103 Query: 77 FIPARAANLPVNNKP-VMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLP--------- 126 + + P + ++L+++ + +F + + Sbjct: 104 LLNPNQVHAPYIERDSDLVLNILIKQPLIDRTFASLISRDNILFDFFYNYIYGISGASNY 163 Query: 127 --SLQRGEGEAMLTALTHLS---RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF 181 + + +++++ R EQ++I ++ L R Sbjct: 164 LMVDRTPRVDQIISSIVEEYCERRPLFEQSLIGWIINLFTELARVYSERKTNQPARPAKP 223 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 I ++++NYA +T A+ F+ +P++LS L + F E VR R+ A Sbjct: 224 GMAEIIGFIRENYA-TVTLSETAKTFSYSPSYLSYLIKKETGQTFKEIVRDFRIESACNF 282 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L+ L++ ++++ GF DS Y +VF++++G++P EY R Sbjct: 283 LKNTQLTLEQISEILGFQDSFYIAKVFKQRYGISPSEYRKR 323 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 97/259 (37%), Gaps = 12/259 (4%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VNNKPVM 93 + V +G+ ++ +++ ++ IP + + + Sbjct: 34 WREFFFVPHWHKEIEILCVHQGQLELVVNGFSRKIKANTIVLIPPNTLHTAYRIAQQSCR 93 Query: 94 LLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT--------HLSR 145 +VF+ + D + + P + + + +LT + + Sbjct: 94 FSCIVFSEQLITSRQSDRIQSQQIDPFLIQEGVTSYVDFPDKSQQSLTLFQLFDQCFMGK 153 Query: 146 SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPR--GDFLYHSICNWVQDNYAQPLTRESV 203 S + ++ +V+ LL V P + + +++ NY + + + + Sbjct: 154 SSYRELRLKGIVIQLLSHLLEVGTDQPAKKSSERLQEKREKIVLSYIHSNYHEMIQLQDL 213 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 A +++ ++ F Q + Y+ R+ ++ +L++ L++ +AQ GF +S++ Sbjct: 214 ADSVSLSKEQFTRFFKQSFRTSPMAYLNHYRLIRSAELLRETDLTMVAIAQAVGFCNSNH 273 Query: 264 FCRVFRRQFGLTPGEYSAR 282 F F++ FG TP +Y Sbjct: 274 FSVCFKKMFGETPTQYRKN 292 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 112/272 (41%), Gaps = 12/272 (4%) Query: 22 LNPQLLGRV--WFASQPASLPVGSLCI-DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI 78 NPQ+L + W + + C DF L + G L+E ++ L +G++L Sbjct: 11 YNPQILFVIDGWCSPEIPVPETNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLIS 70 Query: 79 PARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLT 138 + + L T L L + + + + ++ L Sbjct: 71 NPGVYHQELFEANTNCRELHIGLTNLNLFSNVKKDYIDIGNKNVLTFTKYKDEILKSCLE 130 Query: 139 ALTHLSR-SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPR--------GDFLYHSICNW 189 + + +++ LV+ LL L +N + L SI + Sbjct: 131 IVEEQKTYNQTSPFMLKSLVMKLLVLLYREINEEDTTRDSKEFSFKSREKKALVESITKY 190 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 + +NY + ++ ++++ ++P ++SK+F + I Y+ +R++KA+ +L LSI Sbjct: 191 LTENYTEDISLYTLSKNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSI 250 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +A+ G+ D YF +++++ +G++P + Sbjct: 251 KSIAKMVGYSDPYYFSKLYKKYYGVSPNKSRN 282 >UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A3T9_ENTGA Length = 296 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 104/265 (39%), Gaps = 12/265 (4%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN 89 + + + + + + + G L+ K ++ G ++ I + + Sbjct: 18 IDRSRRDSIYNMVKHWHSECEIQYFIEGNRYFLIGEKTYKIQPGTLVMIHPDCVHNTFSG 77 Query: 90 KPVMLLSLVFAPT-----WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL- 143 K + ++ + S T L IQ+P R + +L + Sbjct: 78 KYIYHDRVLVLYEASKFPRIAQSMGIDLETFFLKHHGIIQIPPADRSYVQTLLAKIADEV 137 Query: 144 -SRSPLEQNIIQPLVLSLLHLCRSV-----VNMPPGNSQPRGDFLYHSICNWVQDNYAQP 197 + Q +++ ++ L + + ++ P S + L + I +++ NYA Sbjct: 138 IHKEYNYQVMVETKLIELFIFIQRIKNFRGLSDEPAESLGKQSELVNQIAAFIRRNYASI 197 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 + E +A F + ++L ++F + EY R+ +++ +L+ I E+A++ G Sbjct: 198 HSLEQIASSFYLDKSYLCRIFKRATGYTITEYTNIQRIRQSQRLLEDTDWDIAEIARKSG 257 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSAR 282 + + Y+ RVF++ +P +Y + Sbjct: 258 YSNITYYNRVFKKYTETSPLQYRKK 282 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 91/262 (34%), Gaps = 17/262 (6%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLV 98 + +L G + +L +G+ LF+ + A + N + Sbjct: 39 FNCHWHPELEIACILEGTMTYQVNQNLYQLGKGDCLFVNSNALHSGCMFENNDCKYIVAT 98 Query: 99 FAPTWLGLSFYDSRTTSLLHP--------ARQIQLPSLQRGEGEAMLTALT--HLSRSPL 148 F P+ + T+ P + + + + ++ + + + Sbjct: 99 FNPSLIYGYEKSDIDTNYTFPLLNTDNFTSFVFRDGADGNETFQKIMKEMAAFYTEENAC 158 Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNS-----QPRGDFLYHSICNWVQDNYAQPLTRESV 203 + I+ + L L S + + + ++ +Y P+T + + Sbjct: 159 YELHIKSRLCELWALLFEEFQRSQLPSGAGLAEAKQISRLKNAIIFIHSSYTDPITLDQM 218 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 A+ + + + ++F + EY+ R+ K+ +L SI E+A + GF S Y Sbjct: 219 AESCHTSKSEFCRIFKKTLHQTPFEYLLRYRIQKSLPLLVTDTCSITEIASQVGFSGSSY 278 Query: 264 FCRVFRRQFGLTPGEYSARFQG 285 + VFR+ G +P EY Sbjct: 279 YSEVFRKYMGCSPREYKKNLMN 300 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 99/273 (36%), Gaps = 6/273 (2%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 + P L D + V+ G + + L E E Sbjct: 6 HENVRSIPHLPIYCDRYEDYRQF-SPRHWHDHIEIIYVVSGSLQVVCGENEYTLKENEFF 64 Query: 77 FIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 I + + + + V +L + +L D + + S + + +++ Sbjct: 65 VINSNKIHGTQSYERVRVLLVQIPYAYLDSYIDDYGQIRFRE-CYETENGSRKYEQMKSL 123 Query: 137 LTALTHLSRSPL--EQNIIQPLVLSLLHLCRSVVNMPPGN--SQPRGDFLYHSICNWVQD 192 L ++ H+ R + + V L++ + + N + R + +V Sbjct: 124 LKSIAHIYRKKGKGYELRLMAKVNEFLYILFTNYSYKEMNAGKESRQIARLKDVLRYVAK 183 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 NY +P+ + A ++ ++ ++F + + F+EYV VR+ L SI ++ Sbjct: 184 NYQEPIALKEAADIASLNQDYFCRMFKKCMGVTFLEYVNQVRINHIHEELLATEDSITDI 243 Query: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 + GF + F R+F+ QFG+TP E + Sbjct: 244 LEHNGFTNYKVFSRMFKAQFGMTPRELRKLQEN 276 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 97/258 (37%), Gaps = 12/258 (4%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV--NNKPV 92 S + D + +L GE + + L EG+ +FI ++ N Sbjct: 34 DHRSGHIPLHWHDEFQFVFILEGEAEFHINEETICLKEGDGVFINCGCLHMAKDANGTTC 93 Query: 93 MLLSLVFAPTWLGLS---------FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL 143 L L +P ++ + + + T + R+ P+ + + L Sbjct: 94 TYLCLNVSPHFITANELFTTFVHPYMHASQTPYILLNRKDHWPNHIYQCIQTI-QRLIDE 152 Query: 144 SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESV 203 + + E + L+ L ++ + Q + + NW+ +Y + + + + Sbjct: 153 TPAYYELELNIQLITMWKCLLQNGFQIKYDARQHDKNERMKPMLNWIHQHYHEKVLLQDI 212 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 A+ ++ + + F + YV R+ ++ ++LQ+ +I E+A + GF + Y Sbjct: 213 ARAGQLSRSECCRYFKDILKKTPLHYVNEYRVQQSLILLQETDFNITEIAYKVGFNSTSY 272 Query: 264 FCRVFRRQFGLTPGEYSA 281 F +F+R TP Y Sbjct: 273 FISMFKRIKNTTPLAYRK 290 >UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIE9_9CLOT Length = 361 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 106/265 (40%), Gaps = 17/265 (6%) Query: 37 ASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN-LPVNNKPVMLL 95 + +F L V G + ++ RL +G + + A+ + + + L+ Sbjct: 88 SHFKEYLHSHEFFELFYVYSGTCHCYFDGREFRLPKGTIWIFNTQCAHNVYLPDDRTNLV 147 Query: 96 SLVFAPTWLG-------------LSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 +++ + LSF+ + + +Q+Q + G E + + Sbjct: 148 NILLRKSTFSAALLGMINDNDLFLSFFLNSIYNSDSAPKQLQFTTEPGGMSEFYIFKIIE 207 Query: 143 LS--RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTR 200 +SP Q+I++ L LL N + +++ DNY T Sbjct: 208 EYAGKSPYSQSIMKHLFCCLLAELTRQYRERADNRGRESGLHISQVISYISDNYRIA-TL 266 Query: 201 ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPD 260 +S A+ F+ P++LSK +H F EY+ ++ KA +L L + VA G+ + Sbjct: 267 QSTAEHFHYNPSYLSKYMLKHTNQTFSEYLTRFKLEKAAHLLTSTALPLERVASLTGYSE 326 Query: 261 SDYFCRVFRRQFGLTPGEYSARFQG 285 F + F++ GLTP +Y ++ Q Sbjct: 327 RSAFDKAFKKFSGLTPRQYRSQKQA 351 >UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZJ5_9BACL Length = 310 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 105/276 (38%), Gaps = 13/276 (4%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 + L+P+L ++ ++ P VL G + + + L + Sbjct: 37 VKSFYQNWKLDPELPMDIYQSTNITFYP---HFHAEIEFIYVLSGTIRIGVNEEIRLLRQ 93 Query: 73 GEMLFIPARAANLPVNNK-PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRG 131 G+M+ + + + + ++ L+ P W+ ++ P P L Sbjct: 94 GDMVICGSNDIHYFDSRELESEIIILICKPEWITMTKSWPSDFRFASPYIPAGTPGL--E 151 Query: 132 EGEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD-----FLYH 184 + +L L + P +++ +L L + V+ P + + Sbjct: 152 TVKTILDELIREKDEKKPGYPLLLKAGILKLCGSLQRAVDTLPMDRTTKEKYESRRARMQ 211 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 I ++++D+Y + L + +A+ F++ P+H S+ F M F Y+ VR+ A L Sbjct: 212 QILSYIEDHYREELNVKVMAKRFSMEPSHFSRSFKAAIGMNFKTYLNTVRVLSAEHQLLT 271 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 LSI E+A CGF F RVF+ G P Sbjct: 272 SDLSIMEIALECGFSSIRTFNRVFKELRGTVPSSLR 307 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 99/237 (41%), Gaps = 10/237 (4%) Query: 47 DFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGL 106 D + +V+ G+ + + + EG++ F ++ + +W+G Sbjct: 41 DHYLIHLVVSGKGIFEVGGRTWEVSEGDLFFARPSQLIRYTADE-----QQPWEYSWVGF 95 Query: 107 SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSR----SPLEQNIIQPLVLSLLH 162 + + + P P + + M ALT++ P ++ + + + Sbjct: 96 NGACAHKLAAQLPFTD-DAPVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMVGYLYLFIA 154 Query: 163 LCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHG 222 + ++ + ++Q NY+ ++ + VA+ ++ +HL ++F + Sbjct: 155 ALMRETSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGVSRSHLYRVFMLNV 214 Query: 223 TMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 I+Y+ R+ +A +L+ +LSI EVA GF D YF RVF+R G+ P +Y Sbjct: 215 GKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVPPSKY 271 >UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NUZ5_BACSE Length = 305 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 96/290 (33%), Gaps = 20/290 (6%) Query: 10 QQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQR 69 +Q + NP + + V + + + Sbjct: 18 RQIINEQLQISESNPIKARYYDYDR----FTYPWHFHSQYEIIYVKKSCGRCFVGDCIEC 73 Query: 70 LVEGEMLFIPARAANLPVNNKPVMLLS---------LVFAPTWLGLSFYDSRTTSLL--- 117 EG+++ + ++ + + F ++ SF + Sbjct: 74 FSEGDVVLFGPSLPHYMRSDDAYHGDNPRLRVQGTIIQFEENFMQYSFDHYPQFHQIRVL 133 Query: 118 --HPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMP--PG 173 R + + G M++A L ++ L + + R ++ P Sbjct: 134 LKEARRGVVFHTADAGAVRDMVSAFPELKGFGQITGLLDLLQALAVSVPRRMLASPCYYE 193 Query: 174 NSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 G+ I +++ NY + L + +A+ N+ + + F F++YV + Sbjct: 194 KFPTAGNKRIDKIISFINSNYTRSLKLDEIAEMANMNSSAFCRFFKDATGKTFLQYVADM 253 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 R+ A +L + I ++A CGF +F R F++ GLTP +Y + Sbjct: 254 RIGYACKLLTIGDMEISQIAVECGFDSIPHFNRTFKQLTGLTPTQYRNQI 303 >UniRef50_UPI0001B9EC7D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EC7D Length = 280 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 16/274 (5%) Query: 23 NPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 Q + + ++ F + G L+ L G++L + Sbjct: 2 QLQAPFDLTYYNEQPLSGGQFHSHAFYEIYYFHEGRCTYLIGDSVFTLKPGDLLLMNGLT 61 Query: 83 ANLP--VNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA-----RQIQLPSLQRGEGEA 135 + P + + L F P W+ ++ + LL P ++ L R E E Sbjct: 62 LHCPNVEPDSRYVRSILHFDPAWICRGLSETAKSILLDPFETLRNHRMTLTGENREEFEG 121 Query: 136 MLTALTHLS------RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNW 189 ML + LS R IQ ++ + C++ V S+ + ++ Sbjct: 122 MLADIHRLSSSTAGFRQERMTLRIQEMMYVIADWCQAAVQDHDSISEKERH--VQHVVSF 179 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ-KYHLS 248 V++NY LT E +A+ +IT ++LS LF + +YV R+ +A+++L+ HLS Sbjct: 180 VEENYMLDLTLEGIARDMHITKHYLSSLFKEVTGTTVFKYVYHRRINQAKIMLRLHPHLS 239 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 I E++Q GF +F R+F+ G TP Y Sbjct: 240 ITEISQASGFKHLAHFSRMFKAMVGTTPEHYRRS 273 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 100/244 (40%), Gaps = 8/244 (3%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVML--LSLVFA 100 S ++ L + G+ ++ + L GE + P + + V L L F Sbjct: 22 SHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKRLVLYFT 81 Query: 101 PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL 160 + + S ++ E A+L AL + + + L L Sbjct: 82 KEMIAVPGVTDVLDQ-----HAWVYKSDEKNETHALLRALLKE-QEFNDNYSEEALYFIL 135 Query: 161 LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQ 220 + ++ ++P SI +++ +NY P+T +A+ F ++P +L + F + Sbjct: 136 NQILILLLRNSTETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLSPYYLCREFKK 195 Query: 221 HGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + ++Y+ +R+ A+ + + S+ E+++ GF + +F RV+R GL+P + Sbjct: 196 YTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKSR 255 Query: 281 ARFQ 284 + + Sbjct: 256 KQAK 259 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 95/260 (36%), Gaps = 9/260 (3%) Query: 27 LGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP 86 L + + P F L +V G +E L +G+ + + A++ Sbjct: 20 LIYITYTKYENDWPSFMHTHPFTELFLVTGGVGEFYVENNIYPLKKGDFILVNPNASHTE 79 Query: 87 VNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRS 146 +++ L + A L+ D+ S + M + L + Sbjct: 80 KSDEKNPLEYIAVAVDNFSLNLTDTNHLMF-------NCISKNPNIIKYMDSMLAEQEGN 132 Query: 147 PLEQNII--QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 + I L + L+ + R + + ++ NYA +T + +A Sbjct: 133 KAYSDHICQNILEIILIEILRITKSDIDTEPTVNASKECFKLKKYMDSNYASKITIDDLA 192 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 + N+ +L F ++ I Y+ +R+ A+ +L+ SI +++Q GF YF Sbjct: 193 KLSNLNKYYLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQSYF 252 Query: 265 CRVFRRQFGLTPGEYSARFQ 284 + F + GL+P Y R + Sbjct: 253 TQCFIKSCGLSPKAYRNRTK 272 >UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUK1_9CLOT Length = 334 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 106/300 (35%), Gaps = 20/300 (6%) Query: 2 KAPGLPADQQFF-----ADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLR 56 ++ +P+ Q +L +L S+ + L ++ Sbjct: 28 ESAAMPSKIQIITNEHQEELKEHGTYEFPVLVSDEALSRFYTSSFQWHWHTEIELTLITE 87 Query: 57 GEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLVFAP--------TWLGL 106 G + + G+ LF + + N + +S+ F P + + Sbjct: 88 GTMVYQINDQIFYPRAGQALFGNSNTMHTGRMENGRDCRYISITFHPRLLYGYQGSRIAS 147 Query: 107 SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSR---SPLEQNIIQPLVLS--LL 161 + D + PA L GE +L + + E +I L LL Sbjct: 148 RYTDPLMENAALPAVCFDLSQEWHGEAVGLLEDIIRIDSLRYDTYEMDIQMDLFRFWKLL 207 Query: 162 HLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQH 221 +L P + + + +++ +NY +T + +++ +I + ++F + Sbjct: 208 YLHCRPDREPAHTAGRKNQERIRQMLSFIHENYQSDITLDDISRHIHICKSECCRVFKGY 267 Query: 222 GTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 EY+ R+ K+ + + L++ E A R GF D +YF +VF + G +P Y Sbjct: 268 MKESLFEYLLKYRIEKSIPDVLEGKLTMTETAIRAGFTDPNYFSKVFHKIKGCSPRSYRK 327 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 115/277 (41%), Gaps = 16/277 (5%) Query: 14 ADLFSGLVLNPQLLGRVWFASQPASLPVG---SLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 + ++LN Q ++W A + P + + +L +L GE + ++ Sbjct: 8 HEAIQQMLLNMQ--VQIWEAERTQCWPEWKEFDYTVSYNKLYFILDGEGWVKIGDEELYP 65 Query: 71 VEGEMLFIPARAANLP--VNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSL 128 V G+++ +PAR ++ +P + F+ T + + Sbjct: 66 VPGQLVLMPARTRQSYSVISGRPYLKYWSHFSATVGDSDVFSWLNVPHCYDLS------- 118 Query: 129 QRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF--LYHSI 186 E A+ L RS ++ + L L R + P + + H + Sbjct: 119 GNAEMPALFQQLVDAHRSDTLAARLREKSVMLDILSRVFEHQQPQIHADKMEDMGRLHKV 178 Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH 246 +++++ + +T E +A ++ PN+ K F +H + +Y+ RM +A+++L+ Sbjct: 179 QQYIKNHLHEEITLEQMAGTLHLHPNYFIKYFKRHFGITPQKYLSLKRMEQAKLMLRTTS 238 Query: 247 LSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 LSI E+A GF ++YF + FR++ G +P EY Sbjct: 239 LSIKEIADATGFESANYFSKTFRKEVGYSPSEYRNNI 275 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 88/252 (34%), Gaps = 4/252 (1%) Query: 33 ASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPV 92 + P F L V G+ L+E + + + +++ I + ++ Sbjct: 26 SRYEGDWPSIPHSHAFTELFYVRDGQGDFLIEDQIFPISKDDLVIINPHINHTEISKGSP 85 Query: 93 MLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI 152 L L SF + + + + L + + ++ Sbjct: 86 PLSYFTVGVDGLCFSFNGHKEYRIFNCREKKTDLLFYFNSLFQELDRQSEGYETICS-HM 144 Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 + L+L L + S + + ++ NY + +T + +++ ++ Sbjct: 145 LDILILQLRRITDSPFELITAQHPSKECAHIKR---YLDSNYGENITLDHLSELSHLNKY 201 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 +LS F ++ + I Y+ R+ + +L+ I ++A GF Y + FR+ Sbjct: 202 YLSHEFTKYYGISPINYLNRKRIEVCKELLENTDYGISDIAHLTGFSSQSYLSQSFRKSC 261 Query: 273 GLTPGEYSARFQ 284 G+T G Y + Sbjct: 262 GMTAGTYRKLKK 273 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 105/303 (34%), Gaps = 43/303 (14%) Query: 25 QLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN 84 Q ++ + V + +G++ + K+ ++ + I + Sbjct: 21 QYPVALYEWNGENEWHVVPHWHEEMEWIYFQKGDFPVWINTKEYQVHAPAFMCIHPEELH 80 Query: 85 LPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQ--------------- 129 + K + ++VF L YD+ +L P + +L Sbjct: 81 ALILEKDGIESAVVFPVDILCFERYDAAEAKVLGPLAEGKLRMPVLCQSGDAAFEELSAC 140 Query: 130 RGEGEAMLTALTH--------------------LSRSPLEQNIIQP-LVLSLLHLCRSVV 168 E E +L + + L++N++ + +L L Sbjct: 141 YKEIEQVLRQMKEHDTKKVQHLDSSITRENVAGEPKQNLQKNMLYLNIKAKMLELIAVAY 200 Query: 169 NMPPGNSQPRGD-------FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQH 221 Q R D + ++ ++Y P+ +A+ N+ + + F ++ Sbjct: 201 KYDLFTRQVREDREESGTVENLKKVLQYIGEHYGSPIRLSELAELVNMNEQYFCRYFKKN 260 Query: 222 GTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 EY+ +R+ KA L + I ++A CGF + YF R F+++ G+TP EY Sbjct: 261 IGKTITEYINVIRVEKAATALAETEDKIIDIASACGFDNIGYFIRRFKKEKGMTPSEYRK 320 Query: 282 RFQ 284 + + Sbjct: 321 KSK 323 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 107/281 (38%), Gaps = 12/281 (4%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 + + +++ ++ P+ + + L G Y + L E Sbjct: 5 LNGIHETVKYKEYSNVKLFINAEAEDYPI--HWHTPMEIIMPLEGGYTVQIGDDLVHLNE 62 Query: 73 GEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQI--QLPSLQR 130 +++FI + + + L L + + + +L+ PA + + Sbjct: 63 NDIIFIASGVKHRLIAPDTGKRLILQIEWSAVSKIKELNSILTLIAPAITLTPETSGDIH 122 Query: 131 GEGEAMLTALTHLSR--SPLEQNIIQPLVLSLLHLCRSVVNMPP------GNSQPRGDFL 182 +L +++ + S L + +I +L +L L + Q Sbjct: 123 SNIRKLLLDISNEYQTDSFLSEAVIYSKILEVLVLIGRHHTASSCHFNVGRHKQQEYLER 182 Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 + SIC ++ + + +T + +A+ + H ++LF Q F +Y+ R+ A +L Sbjct: 183 FLSICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKRIELALTLL 242 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 ++S+ E A + GF + F RVF+ + G TP E+ F Sbjct: 243 ADPNISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFRKMF 283 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 93/255 (36%), Gaps = 8/255 (3%) Query: 37 ASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLL- 95 + + + + + L G +E + L +++ ++ + ++ + + Sbjct: 25 ENTHIPAHWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSKLYMFL 84 Query: 96 SLVFAPTWLGLSFYDSRTTSL-LHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQ 154 + L + D + P S + LT + + ++ Sbjct: 85 CIHVDKKQLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRTNVENKNTSAMR 144 Query: 155 P------LVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFN 208 ++ L+ + + + I ++V ++Y + L+ E VA Sbjct: 145 SDGTALLMLADLIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEHYTEKLSLEEVANQVG 204 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 + + + F QH + F+ Y+ VR++ A IL SI EV Q GF + F R+F Sbjct: 205 FSREYFCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIFNRLF 264 Query: 269 RRQFGLTPGEYSARF 283 + +G+TP + + Sbjct: 265 KEIYGMTPRQARNSY 279 >UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMJ8_9FIRM Length = 283 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 94/264 (35%), Gaps = 3/264 (1%) Query: 23 NPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 L + + S + + + +G L+ +L +++ + + Sbjct: 18 RRPHLESIENLNGATSFGTLKSHHEIAEILFIEKGHCRMHLKEGSLQLHTDDLILVNSDT 77 Query: 83 ANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTT---SLLHPARQIQLPSLQRGEGEAMLTA 139 + + ++ L T L+ P + R + + Sbjct: 78 LHDFKTSSSFTAFTIHIGALHLCGLAPGHLTKSEAPLVLPLGKDGRHIFLRQLLKEVKLL 137 Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 I L +L+ ++ GN + + I ++ +Y + L Sbjct: 138 AALKGEDDERCEIGAALAQALVISVTALAEEDAGNEENPSFTMGTRIKEYIDAHYLEDLK 197 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 +A+ +I +LS F ++Y+ R+ +A+ +L +++I ++A +CG+ Sbjct: 198 LADIAEALHINLYYLSHTFKDLTGSSPMQYIIRRRIEEAQTLLLTTNMTITDIAMQCGYN 257 Query: 260 DSDYFCRVFRRQFGLTPGEYSARF 283 +S+YF VF G+ PG+Y + Sbjct: 258 NSNYFQSVFSNIVGMPPGKYRKAW 281 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 101/288 (35%), Gaps = 21/288 (7%) Query: 11 QFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 + + + + R++ P + + + YG +++ K+ L Sbjct: 3 EILNGMTETINYRNSMDFRLFHNVDYEDYPT--HWHVGIEILMPVTEIYGVIVDQKKYVL 60 Query: 71 VEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQR 130 EG++L + + + + L F P L S + T LL P P + Sbjct: 61 QEGDILIVNSGVPHALEAPPTGERIILQFDPALL-YSLKEMETLLLLFPPVFYITPENEP 119 Query: 131 GEGEAMLTALTHLSRSPLEQNIIQPLVL--SLLHLC----------------RSVVNMPP 172 + + + R Q ++ SL+ L + Sbjct: 120 DLYPLVKAKMEEIIREYDGQQAFAGALVYASLIELFAGVGRITRERNIEGTALHDMRRSK 179 Query: 173 GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRW 232 + Q + CN++ +Y + LT E A+ + H +++F ++ M F EY+ Sbjct: 180 QDRQWEYQEVALKACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFYEYLNK 239 Query: 233 VRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 R+ A +L +SI +VA GF F R F+ +P E+ Sbjct: 240 KRVKCAEGLLYSTEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 97/254 (38%), Gaps = 14/254 (5%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFA--- 100 + + +L G+ ++ + + G ++FI + P ++ + Sbjct: 30 HLHNEYEIYYLLEGQRYYFIDRRTYHVTGGSLVFIDRNQIHQTSQAGPGSHERILISLDQ 89 Query: 101 ---PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL--SRSPLEQNIIQP 155 +L + S + + L + E +L + P ++I Sbjct: 90 NPFSDFLAFTGEMSLEGFFRRNSGILNLDKEGQNLAEYLLDGAAKELHEKKPGFRHITMS 149 Query: 156 LVLSLLHLCRSVVNMPPGNS------QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 + L L + ++ P S + +++ D+Y + L+ E +A F + Sbjct: 150 KLSQLFILAQRHMSGPSSLSADLPLSTQPKHRKVDEVASYIIDHYDKALSLEIIAAHFYV 209 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 +LS++F + EY+ +R+ +AR +L +SI EV++ G+ YF RVF Sbjct: 210 NKCYLSRIFKEASGFTVNEYINMIRIRRARELLSNTSMSITEVSESVGYETITYFERVFH 269 Query: 270 RQFGLTPGEYSARF 283 + +P Y ++ Sbjct: 270 QYTQTSPSGYRKQY 283 >UniRef50_C9PFA6 L-rhamnose operon regulatory protein rhaS n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFA6_VIBFU Length = 268 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 99/267 (37%), Gaps = 5/267 (1%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 + V + DF L IV +G ++L L + + Sbjct: 4 LNCNDFFNNSDATVCTEVRAPQEDFPEHSHDFHELMIVTKGAGQHILNDVPINLAQNYIC 63 Query: 77 FIPARAANLPVNNKPVMLLSLVFAPTWLGLS-FYDSRTTSLLHPARQIQLPSLQRGEGEA 135 +I + +L + + L +++F L S S + + + + Sbjct: 64 YISPKDRHLFEQSDNLHLTNILFQKNKLAYSPLLKSVLPKESDAQQSWYISTETMKKVCT 123 Query: 136 MLTALTHLS--RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 ++ + H S S + + + L L+ S D I +W+Q+N Sbjct: 124 LMAQIEHESSLHSVESRLMTEALFQQLVVEISRG--RLTSQSNNASDNSILKIIDWIQNN 181 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 YA+ ++ F I+ LS+ Q + F YV VR+ A +L LS+ ++A Sbjct: 182 YAEEFNVGDISDQFEISSRTLSRRIKQVTNLSFNNYVHRVRINHAMNLLHYSDLSVTDIA 241 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + G+ DS+YF F+R TP E+ Sbjct: 242 FQVGYKDSNYFSTKFKRFTNKTPTEFR 268 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 105/275 (38%), Gaps = 13/275 (4%) Query: 17 FSGLVLNPQLLGRVW-FASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 + ++ N L R++ F + + V L +VL G + ++Q L + Sbjct: 5 YETVIPNDDLPFRMFIFEGRDGNYRVSKHWHQSVELFLVLEGTLDFFINSRQYTLKPNDF 64 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 + + + P + + L D + Q+ A Sbjct: 65 VIVNPNEIHSIECPDPNITIVLQIPMKSFEGYMSDESRITFADK------DESQKARLVA 118 Query: 136 MLTALT--HLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNS----QPRGDFLYHSICNW 189 ++TA+ + + ++ + L+L + + + Q R + + Sbjct: 119 LVTAMYRTYEKGEFGYRLKVKSQFMEFLYLIVTEFRIEQIDKVRVQQKRHLDKLSQVTQY 178 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 +++NY + L+ E VA F TP++LS +F ++ + Y+ +R+ A L + Sbjct: 179 MKENYDKELSLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYV 238 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 ++A GF D+ F + F++++G P +Y + Sbjct: 239 GDIALDHGFADARAFAKAFKKRYGCLPSQYRKQMN 273 >UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D00 Length = 291 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 119/274 (43%), Gaps = 17/274 (6%) Query: 25 QLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN 84 + V+ + L + D L V +G+ +E K EG++ IP + Sbjct: 14 FPMEMVYRTKKSPQLELPHHLHDLYELVYVYQGKGTFFIENKLMEKKEGDLFIIPGNTIH 73 Query: 85 L--PVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA--------RQIQLPSLQRGEGE 134 P ++P++ +L FAP+ + + S+L + QLP + E Sbjct: 74 SSFPDPDQPIVSSALFFAPSLVLGANGSDLQYSVLSCFEYAQKTGSYRHQLPESNQAYIE 133 Query: 135 AMLTALTHLSR------SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICN 188 ML ++ R ++ L+L + ++ +SQ +L SI Sbjct: 134 DMLKGISEEIRLAQLGFREALVLQLRSLLLHINRYISTLSAEQTAHSQIGPAWLMDSI-Q 192 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 W+ ++ QP+ +++ + P H S++F ++ + Y+ R+A+A+ +L+ + S Sbjct: 193 WIHEHLDQPIGLAALSAQAAVDPAHFSRMFKKYTGLHVTGYMHAKRIARAKELLRNHEAS 252 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + ++A+ CG+ +F R F++ G+TPG Y + Sbjct: 253 VGQIAEICGYATLTHFHRNFKKLTGMTPGAYRRQ 286 >UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides RepID=C3QPX4_9BACE Length = 325 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 100/295 (33%), Gaps = 25/295 (8%) Query: 10 QQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQR 69 ++ + + NP R F P + V +GE L+ Sbjct: 34 KKIMNEKLTITTSNP---VRARFYEYPR-FTYPWHFHSEYEIIYVEKGEGDCLVGDSIIS 89 Query: 70 LVEGEMLFIPARAANLPVNNKP--------------VMLLSLVFAPTWLGLSFYDSRTTS 115 +G+++ + + + V +++ F ++ S Sbjct: 90 YSKGDLILFGSELPHSMQSPPDGGEESDNEEKSELKVRGVNIQFEKDFMHYSISQYSQFI 149 Query: 116 LLHPA-----RQIQLPSLQRGEGEAMLTALTHLS--RSPLEQNIIQPLVLSLLHLCRSVV 168 + R I+ + G+ +L + + + ++ + H Sbjct: 150 PIRNLLEDACRGIKFTITRSGKIIKLLKQIPSAKGVDQIILLLSLLQMMATSNHRKYLTT 209 Query: 169 NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIE 228 + + + + ++ +Y + + + +A + + P + F ++ F E Sbjct: 210 SHYTPSPSIMRNERMEKVIAYLNKHYTESIGLDEIASYTAMNPTAFCRYFKENTGKTFKE 269 Query: 229 YVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 YV +R+ A +L ++I +++ CGF +F R+F+R G+TP Y + Sbjct: 270 YVLDMRIGYACKLLNSSMMNISQISATCGFESPVHFNRIFKRVTGMTPTFYREQM 324 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 96/260 (36%), Gaps = 5/260 (1%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 L + + + + V +G L+ K + E +++ + + Sbjct: 30 RPKLLYITESKFDHEWNSTLHTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLIS 89 Query: 84 NLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT-- 141 + + V +V + + A + + +L + Sbjct: 90 HTERGIENVNFEYIVMGIEGVTYFSKEEDEEQGCSIANYYEYKHEVLFYLKTILFEVKTK 149 Query: 142 HLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRE 201 L QN+++ L+++L+ + P N + L ++ ++ + +T + Sbjct: 150 DTEYQSLCQNLLEVLLINLMRRANINLKSSPINKANKDCVLIEK---YIDAHFKEDITLD 206 Query: 202 SVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDS 261 ++++ + H+ F Q+ + I Y+ R+ +A+++L +L I E+A GF Sbjct: 207 TLSELTFLNKYHIVHAFKQYKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQ 266 Query: 262 DYFCRVFRRQFGLTPGEYSA 281 YF + F++ +P +Y Sbjct: 267 SYFAQAFKKATLTSPLQYRK 286 >UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7P4_RUMGN Length = 253 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 97/252 (38%), Gaps = 6/252 (2%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN--KPVM 93 P S G + L + L GE ++ + +G+ I + P Sbjct: 5 PPSYSFGPAVRNCYLLHLCLEGEGVFYSGEERYPIKQGQGFLIHPGKLTFYQADSVNPWS 64 Query: 94 LLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNII 153 L + G + L I + +L + H + S + I Sbjct: 65 YLWVGIG----GHDAEKYLRLAGLSARNPIFSCTQIDTAKSYILDMMKHHALSAANEIYI 120 Query: 154 QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 Q +++ L L Q + +++ NY PLT + +A + ++ ++ Sbjct: 121 QGILMQFLALLVEDAGCTVSPQQNTSSVYINQAISYIHKNYQNPLTVQEIADYLSLNRSY 180 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 L++LF + + +++ R+ K+ +LQ LSI +A CG+ S F + FR+ G Sbjct: 181 LTELFLKTVQLSPQQFLTRYRITKSEELLQSSSLSIQNIAYSCGYSSSFSFSKAFRKVNG 240 Query: 274 LTPGEYSARFQG 285 L+P EY + +G Sbjct: 241 LSPSEYRKQKRG 252 >UniRef50_D1N9G4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9G4_9BACT Length = 261 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 16/252 (6%) Query: 30 VWFASQ-PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN 88 V+FA + + P + + +V+ GE N+L K+Q G ++ +PA ++ +N Sbjct: 7 VYFADRYDSEKPTSVHSHNGTEIILVVHGECVNVLPGKEQHAKAGSVIVVPAGMSHRQLN 66 Query: 89 NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPL 148 + V + ++F +++ AR + + + G + L + L Sbjct: 67 SGRVTTVYVIF----------EAQQECFDCSARILDVKGDRYAPG--WFEQIVSLKTARL 114 Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFN 208 ++ + L + L +L + + ++++NY + ++ VA Sbjct: 115 DREADRLLGVLLSYLTGRENRLQREGGRSPAAAR---AMAYLEENYNRNISVAEVANACG 171 Query: 209 ITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVF 268 ++P+HL LF + + + + +RM +AR +L +LSI E+ +CGF YFCR F Sbjct: 172 VSPSHLHLLFRREFSESPLASLNRIRMNRARQLLLNCYLSIGEIGFQCGFNQPHYFCRAF 231 Query: 269 RRQFGLTPGEYS 280 R+ G TPGEY Sbjct: 232 RKIHGCTPGEYR 243 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 105/283 (37%), Gaps = 12/283 (4%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 L + + R+ + P L + Y K+ L E Sbjct: 5 LVGLHETVNYRKDMQIRLHNNDVCENYP--PHWHTPFELIMPTESGYSVHCGEKEYVLDE 62 Query: 73 GEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDS--RTTSLLHPARQIQLPSLQR 130 G+++ I + + + + + + + L D S + P + Sbjct: 63 GDIIIICPGVIHELFSPPKGVRIIFLVSLAQIDLQELDLVISMISPAILISPEKFPQIHA 122 Query: 131 GEGEAMLTALTHLSRS-PLEQNIIQPLVLSLLHLC----RSVVNMPPGNSQPRGDFLYHS 185 ML R+ P ++ I L +L L + + Sbjct: 123 QIHRLMLEIRDEYFRNLPYTESSIYAKFLEILVLVGRCYAEIAQHNFEAKNNKQQEYMEK 182 Query: 186 ---ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 ICN++ ++YA+PL+ E VA + H ++LF Q+ F +Y+ R+A A+ +L Sbjct: 183 FLFICNYINEHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLL 242 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 +LS+ +++ +CGF + F R+FR+ G TP E + G Sbjct: 243 VDKNLSVLDISLQCGFSNLSSFLRMFRKLTGFTPTELRKMYDG 285 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 91/253 (35%), Gaps = 11/253 (4%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV--NNKPVMLLSLV 98 V D + V +GE + + L EG+ +FI + N+ + + Sbjct: 45 VIWHWHDEYQFSYVTQGEIYFYINDQTFILKEGQGIFINTGCMHSIKAVNDPESTYVCIN 104 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGE-AMLTALTHLSRSP------LEQN 151 L+ Q + E + L + + E + Sbjct: 105 IDKKLFSSFKGSVIEQKYLNTLTQSAIFLDLSEEWHIECINKLKDIYQFYVDKSFSFEID 164 Query: 152 IIQPLVLSLLHLCRSVVN--MPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 I L+ +L + ++ +N + I +++ +YA+ +T E +AQ + Sbjct: 165 ICINLMQTLALVVKNALNPILLTTIESKDEYQKIKKILSFLHQHYAEKITLEQIAQHIFL 224 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 N +LF + M EY+ R+ K+ +L SI ++A GF Y+ F Sbjct: 225 NKNECCRLFKRKTKMTIFEYLLEHRLNKSIELLIHSDKSISQIAIDTGFSTVSYYIDTFH 284 Query: 270 RQFGLTPGEYSAR 282 + G+TP EY R Sbjct: 285 KNVGITPNEYRKR 297 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 101/277 (36%), Gaps = 10/277 (3%) Query: 15 DLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEA-----KQQR 69 ++F + + + G + VL G + + + Sbjct: 7 NIFPNVNFIDLCMYQFGHEQCEPGHSFGPATRNHYLFHYVLSGTGTLMADNAKGITQTYN 66 Query: 70 LVEGEMLFIPARAANLPVNNK--PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPS 127 + G+ I N + + P + + F + + + T +P Sbjct: 67 IKSGQGFLIFPGQINTYIADDKLPWEYIWIEFDGLRVKEALTTTELTKN-NPVYHTHSKD 125 Query: 128 LQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSIC 187 ++ E ML H S SP ++I + L L +L +S + DF Sbjct: 126 IREKLVEEMLYITRHPSESPY--HLIGHMYLFLDYLMQSAKSSKLVPGGKMSDFYIKEAM 183 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 N+++ N+ ++ E +A I ++L K+F E++ RM KA +L+ L Sbjct: 184 NYIEQNFQNDISIEDIAGVCGINRSYLGKIFKNSVGHSPQEFLMNYRMIKATELLKLTSL 243 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 SI +V G+ + +F R F+ +G+ P E+ + Sbjct: 244 SIADVGSAVGYENQLHFSRAFKNIYGVAPREWRNEHK 280 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 104/285 (36%), Gaps = 15/285 (5%) Query: 10 QQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQR 69 + + G P + + ++ + + V +G ++ + Sbjct: 4 EMLKEKVMHGDDNFPIGIHKTDIDKGRDNI-LYLHWHEGFEYLTVTKGRAVFKVDDLEIE 62 Query: 70 LVEGEMLFIPARAANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHP-------- 119 + +GE +FI + + + + ++V P +L D ++P Sbjct: 63 VSKGEGIFINSNVLHSAHSINEEECSFFAVVCHPAFLSSYINDCINQRFINPILNHSLYF 122 Query: 120 ARQIQLPSLQRGEGEAMLTALTHLSRSPL--EQNIIQPLVLSLLHLCRSVV--NMPPGNS 175 ++ + +LT + +++ + +++ + + C ++ G++ Sbjct: 123 PIHLKKDVDWQRNILLLLTQVYDINKEKEFGYELLLKSKIYEIWFECIKNAKKSINKGSN 182 Query: 176 QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRM 235 + N++ +NY + A +++ H + F + YV R+ Sbjct: 183 TSYKTERMKVVLNYIHENYFNKIVVSEFASLVHMSDEHFCRFFKAMTHFTLVSYVNRYRI 242 Query: 236 AKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 ++ + L + + I E+A GF D YF +VFR+ G TP +Y Sbjct: 243 ERSCVFLSQTNKKISEIAGDVGFGDISYFNKVFRKIMGCTPVDYR 287 >UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGS5_CLOCL Length = 293 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 112/289 (38%), Gaps = 18/289 (6%) Query: 11 QFFADLFSGLVLNPQL--LGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLL---EA 65 L++ +LN + ++ Q + + D + V+ G+ + Sbjct: 1 MITNSLYNPKLLNKDYRPIINTYYFRQWINYKMDYHTHDRVEIMYVIDGQCEIDVATDNV 60 Query: 66 KQQRLVEGEMLFIPARAANLPV--NNKPVMLLSLVFA----PTWLGLSFYDSRTTSLLHP 119 +L +G+ + + A + + K +L++ F+ L + Sbjct: 61 NNLKLKKGDFILLDAGTVHRLIVLGEKSCRMLNIEFSFIEDSDILTSIRLLIEKVKSIAL 120 Query: 120 ARQIQLPSLQRGEGEAMLTALTHL-----SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGN 174 +++ P L + + +L ++ S Q IQ L LL V Sbjct: 121 LFEMRCPFLLLKDNNDIYHSLKNIVIQLGMESEENQFSIQLLFYELLLKISKVAMSNENT 180 Query: 175 SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVR 234 S + + +++ NY + +T + ++ + NI ++L+++F +H EYV R Sbjct: 181 STS--NIYINKAKHFISMNYDKDITIKDISSYVNINEDYLNRIFKKHTGHTITEYVTLFR 238 Query: 235 MAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 + KA+M+L + I ++ G YF +VF++ G++P +Y Sbjct: 239 IEKAKMLLSNTDIPIIDICSYVGINSRQYFSQVFKKCTGISPYKYRKSI 287 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 95/267 (35%), Gaps = 16/267 (5%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN----- 89 L C + L IV G + + G+M I +L + + Sbjct: 20 HFPHLSYPLHCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCDSLTGK 79 Query: 90 ---KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRS 146 + L F+P+ + + + ++ + + R Sbjct: 80 NGSEESACEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRKQVQRL 139 Query: 147 PLEQNI--IQPLVLSLLHLCRSVVNMP------PGNSQPRGDFLYHSICNWVQDNYAQPL 198 Q I I+ L+ L L RS + R ++C ++++++ + L Sbjct: 140 DKGQGIGRIRWLLALLDTLARSQETSLIASGPVRNGTALRRQETVDTVCRYLREHFRENL 199 Query: 199 TRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGF 258 +++A+ + P+ L + F Q ++ +R+ A +L + LSI +A GF Sbjct: 200 CLQAIAREACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLSISAIAWETGF 259 Query: 259 PDSDYFCRVFRRQFGLTPGEYSARFQG 285 + +F R F+ G TPGEY + Sbjct: 260 ANLSHFNRQFKSLTGQTPGEYRKNIRS 286 >UniRef50_C9Y024 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y024_CROTZ Length = 296 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 102/292 (34%), Gaps = 19/292 (6%) Query: 5 GLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLE 64 G P D L + LN ++ + L V G +++ Sbjct: 4 GCPVDTACEKSLLELISLNDDIVSFSRLYANSIRYH---HWHQCLELLYVEEGYGVVMVD 60 Query: 65 AKQQRLVEGEMLFIPARAANL----PVNNKPVMLLSLVFAPT---WLGLSFYDSRTTSLL 117 +Q + G + P + + + L F Sbjct: 61 NQQYTMRPGRLFIFPPMTLHKVMVEERERERYRRTVIHLDNHAALRLLAPFAQRYARLEA 120 Query: 118 HPARQIQLPSLQRGEGEAMLTALT-----HLSRSPLEQNIIQPLVLSLLHLCRSVVNMPP 172 R + + + A L L L++ E + ++ LL L P Sbjct: 121 LSLRGARATVVDFADIHAHLDHLFTLYAPRLAKGRSEHEEVASFLIHLLSLLPE----TP 176 Query: 173 GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRW 232 + L + WV++NYAQ + ++A N + ++LS+ F Q +Y+ Sbjct: 177 APPPRASNALSTQVMFWVEENYAQKFSLGALALKLNRSRSYLSRRFQQETGEAIHDYLTT 236 Query: 233 VRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 R+ KA +L+ + S+ ++A+ GF D+ YF FR++ G TP +Y + Sbjct: 237 FRLRKACELLRHHAYSVADIARMTGFSDTTYFISSFRKRLGETPLQYRKSRK 288 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 102/272 (37%), Gaps = 13/272 (4%) Query: 25 QLLGRVWFASQPAS-LPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 + + S + + +L GE+ ++ ++ + +++F+ + Sbjct: 16 DFPIEFYHVTPNHSRYNMPYHWHTECEIIRILEGEFILFIDKEKILAKKNDIIFVHSGIF 75 Query: 84 NLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLT----- 138 + + N + +VF L L ++ T + ++ + + L Sbjct: 76 HGGLPN-DCIYECIVFDMKLL-LKDNNACTKQIYDIVNHNKVIAHKLPSNVQALNNCCTS 133 Query: 139 -----ALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDN 193 + + Q + L+ ++L V N ++ +++ Sbjct: 134 LFEAMRVKSTGYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQLKNVITLIENE 193 Query: 194 YAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVA 253 Y PLT E +++ ++P + + F + IEY+ + R+ + L LSI E+A Sbjct: 194 YQNPLTLEDLSKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKLLATELSITEIA 253 Query: 254 QRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 CGF D YF + F++ G+TP +Y + Sbjct: 254 LNCGFNDVSYFIKTFKKHKGVTPKQYLKSLKA 285 >UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969E72 Length = 291 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 98/272 (36%), Gaps = 15/272 (5%) Query: 24 PQLLGRVWFASQPASLP---VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 PQ R + P +G L V+ G L+ + + GE++ IP Sbjct: 2 PQSERRSFTFENVHLAPDEQIGLHQQSTWELSYVIVGSGMRLIGDMTEPFLGGEVVMIPP 61 Query: 81 RAANLPVNNKPVM-------LLSLVFAPTWLG--LSFYDSRTTSLLHPARQIQLPSLQRG 131 + +++ F +L + + ++ + Sbjct: 62 EIPHCWYFEDDDTDEQGRIANITVTFDNDFLDRCSGTFPELCGHIDKLKKKYDAVKFDKE 121 Query: 132 EGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQ--PRGDFLYHSICNW 189 + EA++ L + E + ++ +L + S G Q + + I + Sbjct: 122 KSEAIIDLLEEMCNQS-EAERVASMIKLILIMADSGSEHVVGKYQRIDKETKRMNQIQTY 180 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 V N + +T + VA++ + F + F+ Y+ R+ A +L++ +++ Sbjct: 181 VICNAKRDITLDDVARYVGMNRASFCIFFKKATGKTFVTYLNEYRIGLACQLLKQKRMTV 240 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 E+ GF + YF R F+R G++P EY Sbjct: 241 SEICYNVGFNNVPYFNRTFKRHKGVSPCEYKQ 272 >UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV13_PAESJ Length = 285 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 106/273 (38%), Gaps = 14/273 (5%) Query: 20 LVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIP 79 + L P + + + L ++ + RG L+ + EG++L I Sbjct: 12 IELPPAFPIVISQSEGVSPLFQRLHWHTALEINYISRGSGYYLINGTRYDFREGDILLIN 71 Query: 80 ARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE-GEAMLT 138 + + N+ +++ ++F P + L T LL P R+I + + G +L Sbjct: 72 SNDLHRAFENEGLVMTIIMFDPAYFALE--QRYDTELLIPFREIGMRFDNMLDRGHPILP 129 Query: 139 AL---------THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD--FLYHSIC 187 L R P + +I+ ++ + R + Sbjct: 130 RLGAAIEEMRCEFAGREPHYEAVIRSQLVQFMAFVNRYFAKEQERRSSRIRGMEIVRLTL 189 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 N ++ + A P T + +A +++P+ S LF Q ++Y+ +R++ A +L+ Sbjct: 190 NTIEADIAYPWTLKELAAAAHLSPSRFSALFVQTVGTSPMDYLIQLRLSAAVSLLESSDK 249 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 I EVA+ GF + F R+F++ G P E Sbjct: 250 KIIEVAESAGFRNLSNFNRLFKQHIGKQPSELR 282 >UniRef50_D0ZE29 Hypothetical transcriptional regulator AraC family n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZE29_EDWTE Length = 275 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 125/237 (52%), Gaps = 3/237 (1%) Query: 50 RLDIVLRGEYGNLLE-AKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSF 108 RL+IV+ G E + R G++L++P+ ++ LLSL+FA + L+ Sbjct: 36 RLEIVIAGSLLRRDEHGRAYRQRCGDVLYLPSGEQRQITGDEEATLLSLLFAKQRIVLTL 95 Query: 109 YDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVV 168 + L +Q Q+ G +L AL + P Q + V +LL C ++ Sbjct: 96 WQWDGAQ-LQRRQQTQIARRGPRTGTFLLQALNEQAMQPAAQATARLTVSALLSHCSDLL 154 Query: 169 NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIE 228 + P L ++I +++ D+Y L+R++VA+ F+ITPN+LS+LF + F Sbjct: 155 AGHL-RTAPHRQALLNAIRDYIDDHYMDALSRDAVARRFHITPNYLSQLFQRADGGGFNH 213 Query: 229 YVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 Y+ VR+ +A+ +L++Y ++I +A CG+ DS+YFCR+FR++ TP EY ++ Sbjct: 214 YLNHVRLEQAKTLLKEYEMTIKAIAHACGYDDSNYFCRLFRQRTERTPSEYRRQYHS 270 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 113/270 (41%), Gaps = 8/270 (2%) Query: 15 DLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQR-LVEG 73 +L + NP+ + ++ + DF + ++L GE E + + + G Sbjct: 2 NLVNPRTFNPE-IIYLFDPWTQSESHGEMHHHDFLEISVLLEGESTYYFEKEPAKKIRAG 60 Query: 74 EMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEG 133 ++ + + K L + L + HP ++ Q E Sbjct: 61 SVMLFNPGVDHCELQPKGTRSHQLHIGLKNISLEGFKRNFFPNKHPLLELGKYHHQVLEK 120 Query: 134 EAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMP------PGNSQPRGDFLYHSIC 187 L + R + L+ L+++ R + SQ R + + Sbjct: 121 AWQLVRESSEERDEFQLMQKAVLMEMLVYILRGLNEDHINVLPYLSKSQRRQQQIVNYTV 180 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++++Y + +T E +AQ ++P +LSK+F + + I Y+ +R+ +A+ +L+ +L Sbjct: 181 YYLENHYKEEITLEKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNENL 240 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPG 277 +I EVA G+ D+ +F + F++ +G++P Sbjct: 241 TIKEVASAVGYQDAYHFSKSFKKLYGVSPS 270 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 105/262 (40%), Gaps = 3/262 (1%) Query: 24 PQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 P L + + F L + +G+ + ++ + E ++ + Sbjct: 17 PVKLLYITKSKYDKDWHSTIHAHHFTELLYITKGKGTFIFYKEEIPVQEHNLIIVNPNIE 76 Query: 84 NLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL 143 + ++ L + L S ++ + +H +Q Q L + ++ + + Sbjct: 77 HTEKSDTNHPLEYIALGIQGLSFSSIENPSPVTIHNYKQDQKNFLFY--LQQLVEEVEN- 133 Query: 144 SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESV 203 + + I L + LL + R S + + I N+++ ++ + ++ +++ Sbjct: 134 HQEDYDLIIQNILEILLLKMMRKKSFNVEKTSTQKINKDIEFIKNYIKQHFHENISLDTL 193 Query: 204 AQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDY 263 A +I +LS F + + IEY+ R+ +++++L+ + SI ++ GF + Sbjct: 194 ASISHINKYYLSHSFRKFVGVSPIEYLIQTRIRESKILLETTNYSISNISTITGFSSQSF 253 Query: 264 FCRVFRRQFGLTPGEYSARFQG 285 F + F+R+ L+P +Y Sbjct: 254 FAQSFKRETNLSPSQYRNAINS 275 >UniRef50_Q2SE27 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SE27_HAHCH Length = 288 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 99/283 (34%), Gaps = 14/283 (4%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 L+ + R +F Q LP L L + R G++ Sbjct: 4 LYEKVRYPEDASWR-FFLRQLDELPFQWHYHPEYELTYTLNSAGQRYVGDHVDRYESGDL 62 Query: 76 LFIPARAAN------LPVNNKPVMLLSLVFAPTWLG-----LSFYDSRTTSLLHPARQIQ 124 + I + P +KP + L F W+ Y L R + Sbjct: 63 VLIGPNLPHSWRSSQRPDEDKPHTVYVLWFNQQWVDRLLENFPEYGDVGDILKQSRRGLT 122 Query: 125 LPSLQRGEGEAMLTAL--THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL 182 E + TAL L + + + H + N G + R + Sbjct: 123 FSPTDHASVERLFTALPTQGPKERLLTLLSLLGGLAQIPHTPLASANFCTGTTSRREQDI 182 Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 I + +A LT E +A+ N++ + S+ F++H F +Y+ +R+ +A L Sbjct: 183 LDGILDCAHLAFADKLTIEDMARRHNMSVSKFSRFFSKHMNQSFNQYLTQIRLGQACSKL 242 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 I +A++ GF + F R+F++ G+TP + RF Sbjct: 243 INTAAPIALIAEQTGFNNLSNFNRLFKKHKGVTPQGFRKRFTA 285 >UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N277_9BACT Length = 315 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 108/253 (42%), Gaps = 7/253 (2%) Query: 40 PVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVF 99 +F L +VLRG +L ++++ L G + + ++ ++P+ L++ +F Sbjct: 46 HTQYHKHNFYELAVVLRGAGTHLTDSQKLPLRPGSVFLLHPGESHAYEYSEPLTLMNFMF 105 Query: 100 APTWLG---LSFYDSRTTSLLHPA----RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI 152 L S LL R++ + S E + +L A+ SR Sbjct: 106 DSQILRPYRKSLSGLAGYPLLFCPAEERRELCVDSATLAELDILLHAMAMESRQRSAGAE 165 Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 + + L L + + R + +++ NY + ++ +A+ N++ + Sbjct: 166 LLLISHLLNLLVLVLRKSCSYVERERFNSDIGIAVAFMRRNYQEEISLPKLARLANLSES 225 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 + F + ++++ +R+ KA L + ++I E+A GF DS YF R FRRQ Sbjct: 226 SFFRKFREEMKTSPMQWLLNLRIRKAMEFLIRSDMNIGEIAAATGFSDSLYFSRQFRRQV 285 Query: 273 GLTPGEYSARFQG 285 G++P Y ++ G Sbjct: 286 GVSPKNYRSQAHG 298 >UniRef50_C6CZY9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZY9_PAESJ Length = 283 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 95/276 (34%), Gaps = 14/276 (5%) Query: 20 LVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIP 79 + + + + + +P + G+ L+ L G ++ + Sbjct: 1 MSVQERYPLPIEAMYNTSQIPTDFHSHLEYEIYYFHSGKCKLLIGDSIYELAPGNLILMN 60 Query: 80 ARAANLPVNNKPVMLL--SLVFAPTWLGLSFYDSRTTSLL-----HPARQIQLPSLQRGE 132 + P + + F P + F LL R I L + ++ Sbjct: 61 GMTLHYPSIDNRYEYCRTVVHFDPAFASGLFQPPFLIPLLLPFERQTNRLISLKAEEQAR 120 Query: 133 GEAMLTALTHLSRSPLEQNI------IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSI 186 E +L L L +S + Q L+L + + Sbjct: 121 IEPLLERLCQLRQSNDPLSHDRLILCFQELLLLIYEFAHMPSYGQASPPGSIKHQNVQKL 180 Query: 187 CNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL-QKY 245 +++++Y + L + +A + ++ ++L K+F + + Y+ R+ +A+M+ Sbjct: 181 IAYIEEHYREDLELDDIADYMHLNKHYLVKIFKETTGITLFHYLYQRRINQAKMLFTMNP 240 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 SI E A GF +F + F++ G +P +Y Sbjct: 241 DRSITETAFEIGFKYVSHFSQTFKKFTGQSPDDYRK 276 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 97/275 (35%), Gaps = 12/275 (4%) Query: 20 LVLNPQLLGRVWFASQPASLPVGSLC-IDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI 78 + + ++ + ++ + +V +G ++ L G+++ + Sbjct: 8 FNQSHIVPFQLVHNKTKSCDDELPHHLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIV 67 Query: 79 PARAANLPVNNKP--VMLLSLVFAPTWLGL-------SFYDSRTTSLLHPARQIQLPSLQ 129 P + + + +K V +L F P+ L S + TT+ + + + Sbjct: 68 PGNSIHCSLLDKGKTVTTSALYFCPSLLASMIGSESDSLHSLFTTAKTTKQYRYYMEREK 127 Query: 130 RGEGEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSIC 187 + + + + L+ + P Sbjct: 128 QAFLAGLFDEIAKETAIADLYSGETVALLIRYAIVFVSRNCGTAQEKLSPLVPAWIKESL 187 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 ++ + + L + +A + P++ SK F + +IE+++ R+ KA+ +L+ L Sbjct: 188 AYIDAHLHEELDLKMLAAHACVHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDL 247 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 SI +A+ CG+ +F R FR G TP Y Sbjct: 248 SIQAIAEACGYHSMPHFYRTFRAATGTTPAAYRKN 282 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 116/304 (38%), Gaps = 23/304 (7%) Query: 3 APGLPADQ-QFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGN 61 AP P D + F P + P DF L V+RG N Sbjct: 63 APPPPKDGVMVLDNRFLSRNFRPSDILINAHIPFFNRSPQP-HKHDFFELVYVVRGSMKN 121 Query: 62 LLEAKQQRLVEGEMLFIPARAANLPVNNKPVML-LSLVFAPTWLGLSFYDSRTTSLLHPA 120 +++ ++ L +G+ + A + + L ++ + +F + L Sbjct: 122 VVDGRRILLEQGDFCLMNPNAVHQVETDGKDPLAINFLMKKELFNKAFLSIVLENELFAN 181 Query: 121 RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQ------------------PLVLSLLH 162 + ++ + ++ + HL + Q ++Q + + Sbjct: 182 FFVDSIYHKKNKQNYLVFSARHLEEPIISQYLLQIFREYENDQLYSQRVIESAMSCLFVE 241 Query: 163 LCRSVVNMPPGNS-QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQH 221 RS S Q I +++ +NY T ++ A+ FN P +L L ++ Sbjct: 242 FTRSYKRELEFESLQDLPGGNISKIISYLSENYRTA-TLQTTAKQFNYHPKYLPNLLKKY 300 Query: 222 GTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 F E V+ R+A A +L++ L I +VAQ G+ + YF +VF+++FG++P +Y Sbjct: 301 LGQSFSEIVQQFRLAHACELLKQTELPISDVAQESGYTNRTYFYKVFQQKFGMSPNDYRH 360 Query: 282 RFQG 285 + Q Sbjct: 361 QNQA 364 >UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745884 Length = 295 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 100/282 (35%), Gaps = 19/282 (6%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 + + P+ +S L +V + + ++ L G++ Sbjct: 16 IREHIPRRPEDPI-FCEHLAGSSYGTPWHFHPELELVLVKKSQGYRIVGDNITNLSAGDL 74 Query: 76 LFIPARAANLPVNNK---PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE 132 + + + +L + + + + F +LG F S P RQ+ + + Sbjct: 75 VLVGSNLPHLWHQDNTAGELEAVVVQFVADFLGREFAG---RSDFEPVRQLMDKARRGLH 131 Query: 133 GE-AMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMP----------PGNSQPRGDF 181 + + + + ++ L LL + + + P Sbjct: 132 ITGDVRDRVADRMSAMVGLGPLRRL-AELLSILDDLAHSPGVAFLSSPGFAPQLGLGDQA 190 Query: 182 LYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 + ++ + +P+ R+ VA ++P S+ F F Y+ +R+ +A + Sbjct: 191 RVDRVMQFIHKHLCEPINRDQVAAIAALSPGAFSRFFRSRTGRTFPAYLNELRLGRAARL 250 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 L L + +VA CGF + +F R+F + G+TP E+ R Sbjct: 251 LSTTDLRVVDVAADCGFRNLAHFNRLFLKWKGVTPSEFRKRL 292 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 102/271 (37%), Gaps = 9/271 (3%) Query: 21 VLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 + S+ + + + + +G +E K+ L +G+ LFI + Sbjct: 14 NYEFPCAVYFSYVSKYTAGEIDWHWHKEIEIINIYQGTLYVEIENKKFILSKGDSLFINS 73 Query: 81 RAANLPV--NNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA---RQIQLPSLQRGEGEA 135 + + +++S VF + + ++ + P +++ L + + + Sbjct: 74 EEMHFMKMNTKEECVIISFVFNKSLICGDKGNNIEQKYIDPLINCKELSALELTKEDSKK 133 Query: 136 MLTALTHLSRSP--LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRG--DFLYHSICNWVQ 191 + A S + E + L LL++ R + +S + ++ Sbjct: 134 LAQAYYSYSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSSNNSNTDKERIKRMLAFIY 193 Query: 192 DNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHE 251 NY++ ++ +A+ I + FA+ + IEY+ R+ A +L+ I E Sbjct: 194 KNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKYRIYTAAEMLRNSEQPIAE 253 Query: 252 VAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 + + GF YF +VF R G TP EY Sbjct: 254 ICLQTGFNSPSYFSKVFCRMLGTTPREYRKN 284 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 112/271 (41%), Gaps = 12/271 (4%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 + NP++L + + P +F + I+L GE +++ +Q G + Sbjct: 5 NSRTFNPEILY-AFDPWNEETHPYNCHHHEFLEISILLEGESEYIVQGQQYHATAGTVFL 63 Query: 78 IPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAML 137 R + L + L L + + + L L E Sbjct: 64 FNPRTEHGEQQKAGTYSHQLHIGISNLYLEGLARNVFP--NKSALLDLSHLHGAFLEKAW 121 Query: 138 TALTHLSRSPLEQNI-IQPLVLSLLHLCRSVVNMPPGNS--------QPRGDFLYHSICN 188 + L+ +E + I+ LV+ LL + + N + R L + Sbjct: 122 QIVHELNHQEVESALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTIY 181 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +++ ++ + +T E +A+ +TP +LSK F + I Y+ +R+ A+ +L+ LS Sbjct: 182 YLETHHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLS 241 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEY 279 + EVA+ G+ D+ +F ++F++ +G +P ++ Sbjct: 242 VKEVAKTVGYEDAYHFSKLFKKYYGKSPSQF 272 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 70/149 (46%) Query: 137 LTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 L S L + L + Q + +++ +YA+ Sbjct: 364 LGIRYERLASFASCRSAAELKRAALDELDRIAADLEVWRQQQAYGKLGKAKDYIDRHYAE 423 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 PLT E VA+ I+P + SKLF +H + FI+YV VR+ +A+ L + S+ E+ Sbjct: 424 PLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAETDQSLKEICFSV 483 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 G+ D +YF RVF++Q GL+P EY + Q Sbjct: 484 GYNDPNYFSRVFKKQTGLSPSEYRKKVQA 512 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 113/282 (40%), Gaps = 21/282 (7%) Query: 23 NPQLLGRVWFASQPASLPVG--SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 Q + +++ P D+ + V G N + + +L +G++L + Sbjct: 63 QDQDIAILYYGLPLGQPPKQYVWHNHDYFEIIYVHSGSCFNRFQGETIKLCKGDILLLNP 122 Query: 81 RAANLPVN-NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPAR-------------QIQLP 126 + ++ + +++ + + S + + + + + Sbjct: 123 TILHQIYALHEEDHIFNIMLSKSLFEGSMWQLLSGNKIINNFFVNYFYQMNKTKDYVHFR 182 Query: 127 SLQRGEGEAMLTAL--THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFL-- 182 Q E +T+L +L + P +IQ ++ L + + Q + + Sbjct: 183 CSQNHLIEETITSLIAEYLGKKPAYYQVIQSYLIILFAYLSRIYSEQHFIEQQDLEKIGI 242 Query: 183 YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMIL 242 I +++ NY Q +T + FN + + S+L H F E V ++ A+ +L Sbjct: 243 LPDIISFIAQNY-QSVTLTEIQNVFNYSSGYTSRLIKHHTGKTFSEIVHDFKLNHAKELL 301 Query: 243 QKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +L+I ++A++ GF DS Y +VF+++FG+TP +Y + Sbjct: 302 VSTNLNITDIAEKIGFNDSHYLNKVFKKRFGITPTQYRRGMK 343 >UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGE3_9CLOT Length = 371 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 104/257 (40%), Gaps = 17/257 (6%) Query: 42 GSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP-VNNKPVMLLSLVFA 100 +F L V G ++ L +G + + A+ + + L++++ Sbjct: 107 HLHTHEFFELIYVYSGTCYCNFSGEEFCLSKGTIWIFNTQCAHSVVIPDDGSTLVNILLR 166 Query: 101 PTWLGLSFYDSRTTSLLH-------------PARQIQLPSLQRGEGEAMLTA--LTHLSR 145 + + + + L +Q + E E + L + ++ Sbjct: 167 KSTFSSAILNMIQDNDLFLDFFLKSIYDANTQPHHMQFQAQPGSEIEFYIFKIILEYANQ 226 Query: 146 SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQ 205 S Q+I++ ++ +LL + +I ++ D+Y +T +S A+ Sbjct: 227 SNYRQSIMKLMLSTLLTELARDYQLRSETEDKTASIDILNIIAYISDHYT-DVTLKSTAE 285 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 F+ +P+++SK ++ F+EY++ +++KA +L L + +VA G+ F Sbjct: 286 HFHYSPDYISKCIYKYTGYSFLEYMKRYKLSKAEYLLLHTKLPLEQVASMVGYSQRSSFD 345 Query: 266 RVFRRQFGLTPGEYSAR 282 R F++ + LTP Y ++ Sbjct: 346 REFKKHYSLTPSRYRSQ 362 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 100/264 (37%), Gaps = 16/264 (6%) Query: 36 PASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP--VNNKPVM 93 + + + L +VL GE+ + +G+++ I + + + N+ Sbjct: 28 NIEKSIIAHWHNEIELILVLSGEFNLKINTDSYTCKDGDIILINSGSLHYFSTKENESST 87 Query: 94 LLSLVFAPTWLGLSFYDSRTTSLLHPARQ--------IQLPSLQRGEGEAMLTALTHLSR 145 S+VF L + D+ + + + P I SL E + ++ + Sbjct: 88 WNSIVFNMDQLNSNILDNCSVNFITPIINNEFKLPVIIHKDSLINNELKCIILNIIDTYN 147 Query: 146 SPLE--QNIIQPLVLSLLHLCRSVVNMPPGNSQ----PRGDFLYHSICNWVQDNYAQPLT 199 S + I+ L+ L + + + ++Q+NY + + Sbjct: 148 SKYYGFELEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEEKIEKIKIVLEYIQENYNKEID 207 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 ++ + +H + F +H I++++ R+ KA ++ LSI E++ GF Sbjct: 208 INRLSAICHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKAASLISNTDLSITEISLEVGFT 267 Query: 260 DSDYFCRVFRRQFGLTPGEYSARF 283 + YF R F+ ++ TP + R Sbjct: 268 NISYFIRSFKEKYNTTPKGFKTRL 291 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 103/267 (38%), Gaps = 8/267 (2%) Query: 25 QLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN 84 + + + + +L GE+ LE + L + ++ FI + Sbjct: 17 FPIEYHYVDHTHPQYEMPFHWHIEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKLH 76 Query: 85 LPVNNKPVMLLSLVFAPTWLGLSFY--DSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 + K +VF L + D+ + H I + ++T Sbjct: 77 G-GSPKDCTYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFDA 135 Query: 143 L--SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSI---CNWVQDNYAQP 197 + E +I+ L+L L ++ + + + +YA+P Sbjct: 136 IRSEEEGYELSILGSLLLFFAALQKNEYYSKEEEYDLKSQKAIEQLKASLELIVTDYAKP 195 Query: 198 LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCG 257 LT + +++ ++P + + F ++ I+Y+ + R+ +A + + ++ ++A RCG Sbjct: 196 LTLQELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRCG 255 Query: 258 FPDSDYFCRVFRRQFGLTPGEYSARFQ 284 F D YF + F++ G+TP +Y ++ Sbjct: 256 FNDFSYFIKTFKKYKGITPKKYQMMWK 282 >UniRef50_C6D0F8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0F8_PAESJ Length = 275 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 110/270 (40%), Gaps = 17/270 (6%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN 89 ++++ QP + G+ L+ + L G+++ + + + Sbjct: 5 LYWSDQPIEP--FFHSHMHYEVYYFHGGKCNYLIGDQIYELAPGDLIIMYGMTLHCAKAD 62 Query: 90 KPVMLL--SLVFAPTWLGLSFYDSRTTSLLHPA-----RQIQLPSLQRGEGEAMLTALTH 142 V + + F PT L ++L P +++L + E E +L + Sbjct: 63 PSVEYIRSIIHFEPTLLQPYLELPHARNILQPFQQLNNYRLRLRGEDKAEVERILARMDE 122 Query: 143 LSR-------SPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 + + + L + L H + ++N + I + +++NY Sbjct: 123 YQKRGDAVGDNRFRLAFVDLLYMILDHCEQPLLNRNRQEYSSEKEATVQRIISVLEENYT 182 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI-LQKYHLSIHEVAQ 254 + L E + + +++ ++LSKLF + + Y+ R+ +A+++ L + LS+ EV Sbjct: 183 EDLNMELLEERLHLSKSYLSKLFKEVTGVTIFHYIYTRRINEAKILFLMQPELSVTEVCF 242 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 R GF +F R+F++ G+ P ++ R Q Sbjct: 243 RLGFKHLAHFSRLFKQYAGMPPEQFRKREQ 272 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 110/278 (39%), Gaps = 23/278 (8%) Query: 21 VLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPA 80 LNP+ L S DF +++ G+ ++ K + EG+ + + Sbjct: 12 DLNPEFLF--TCVSTRTEEEQNYHAHDFIEFAVIMGGKGKFYIDGKDYEVEEGDFILLNP 69 Query: 81 RAANLPV---NNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAML 137 + + + + + F+ G+SF ++ ++ + + + Sbjct: 70 GTYHRSKAGYSKEGLKECYIAFS----GVSFKGCKSGYFPSFKGNGKIIKMADRMKKNIF 125 Query: 138 TALTHLSRSPLEQN-----IIQPLVLSLLHLCRSVVNMPPGN--------SQPRGDFLYH 184 T +++ E + +++ ++ +L L ++ Sbjct: 126 QICTVMNKEARECSAGRYFMLKAYLIQILCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQ 185 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQ- 243 I ++++NY + ++ E +A ++ +++K+F I Y+ +RM KA+ IL+ Sbjct: 186 QIMKYMEENYREKISLEQIAANMYLSSFYIAKIFKSETGDTPINYLIRLRMEKAKEILEI 245 Query: 244 KYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 I EVA G+ D+ +F ++F++ +G++P Y Sbjct: 246 SPEEPIKEVAAAVGYSDAYHFSKLFKKHYGISPLYYKK 283 >UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZFS6_EUBR3 Length = 293 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 106/296 (35%), Gaps = 17/296 (5%) Query: 1 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLP-VGSLCIDFPRLDIVLRGEY 59 MK PA Q + Q + A P + + D L ++ +G Sbjct: 1 MKNNNPPALGQKENAKHGEVFFPVQK----YITRLAADYPVITTHWHDEAELTLITKGSC 56 Query: 60 GNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLS--LVFAPTWLGLSFYDSRTTSLL 117 ++ + EG+++FIP + S VF +LG + D ++ L Sbjct: 57 TYQIDLLEYEAKEGDIIFIPPLLLHSISIRDCDEFYSETYVFHINFLGGNNTDICSSRYL 116 Query: 118 HPARQIQLPSLQ--------RGEGEAMLTALTHLS--RSPLEQNIIQPLVLSLLHLCRSV 167 P + +T+L + + ++ +L + L Sbjct: 117 TPLINHEFAMPYLIAPKHPAYSSLCKCFMRITNLYSRQEFAYELALKAFLLQAIFLLLQY 176 Query: 168 VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFI 227 ++ +++ +YA+ + +A + H + F +H M + Sbjct: 177 SEKNADFGVNTSSDKLKNVLDYIDVHYAESIQVAELAGLCYFSEYHFMRFFKKHMNMTCV 236 Query: 228 EYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +Y+ VR+ K+ ++ + SI +V+ GF + YF R F++++ +TP + Sbjct: 237 QYINNVRLEKSVEQFERGNTSILDVSLSVGFHNLSYFHRAFKKRYHMTPLSFIKSL 292 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 98/254 (38%), Gaps = 16/254 (6%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN-NKPVMLLSLVFAPT 102 D + V +GE +E ++ L EGE LFI + ++ + ++ +F Sbjct: 57 HWHDEIQFTYVSKGELTMQVEGREYVLKEGEALFINSGLIHVTTSISEDGQYEGFMFPEK 116 Query: 103 WLGLSFYDSRTTSLLHPARQIQLPS-----LQRGEGEAMLTALTHLSRSPLEQNIIQPLV 157 LG + + P + + S + E E +L+ + +L + + Sbjct: 117 LLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRESAEDEKILSDIRNLRELFNNKENVTAFE 176 Query: 158 LSLLHLCRSVVNMPPGNSQP----------RGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 + ++ N + + ++ ++Y + +T + +A+ Sbjct: 177 YEVAVRMTAIWLQIVRNVSDTMQKMPACYLQRQERMKKMMQYIVEHYHEAITLKEIAESA 236 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 +I+ + F + Y+ R+ +L+ L I ++A R GF DS YF + Sbjct: 237 SISIEECRRCFKDIIKETPMHYLSSYRVMVGMELLRTTDLDITDIAFRVGFNDSSYFIQA 296 Query: 268 FRRQFGLTPGEYSA 281 F+++ G+TP +Y Sbjct: 297 FKKKNGMTPKQYRN 310 >UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 Tax=Clostridiales RepID=C4ZF37_EUBR3 Length = 291 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 94/254 (37%), Gaps = 13/254 (5%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN--NKPVMLLSLV 98 V D L + +G ++ K+ + ++ I + ++ + +++ Sbjct: 36 VPLHWHDDMELIYIKKGCGHISVDFKEYHVTAPSLVLILPGQLHSIDQYMDESMEYENII 95 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQIQLPSL--------QRGEGEAMLTALTHLSRS--PL 148 F+ + L YD L P + + A + A + ++ Sbjct: 96 FSLSMLLPGKYDYTKEDFLTPLLAGRFTVPTVFTPVYPYYEDVVAPIDACDEICKTMPQG 155 Query: 149 EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD-FLYHSICNWVQDNYAQPLTRESVAQFF 207 Q I+ + + + + + + +V++NYA ++ +A Sbjct: 156 YQLYIKSKLYEFFFVLDNRCRNLTKPLKSKKTLDKMKVVLKYVENNYADKISIADIADVA 215 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 + +H + F + F++Y++ R+ A +LQ S+ ++ GF YF R Sbjct: 216 GFSESHFMRYFKETMGTSFVDYLKDYRLTMAARLLQSSDSSVLSISGEVGFESLSYFNRA 275 Query: 268 FRRQFGLTPGEYSA 281 F++ +G+TP +Y Sbjct: 276 FKKHYGMTPLQYRK 289 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 87/253 (34%), Gaps = 4/253 (1%) Query: 33 ASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPV 92 + P F L V G L+E + + + +++ + + ++ Sbjct: 26 SHYEEDWPSIPHTHAFTELFYVSEGSGEFLIENQHFSIKKDDLIIVNPHIQHTEISLSAS 85 Query: 93 MLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI 152 L + SF+D + + H ++ L ++ Sbjct: 86 PLSYYTVGVDGISFSFHDQKEFQIFHYHQKHADLLFYFHSLFQELDEKNDGYEEIC-KHT 144 Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 + L+ L S + P + L ++ +Y+ + E +A ++ Sbjct: 145 LAILISQLRRFAVSDFQLFPSFHPSKECALVKR---YLDSHYSDDINLEQLASLSHLNKY 201 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 +LS F ++ + I Y+ R+ + +L+ I ++A GF Y + FR+ Sbjct: 202 YLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAHLAGFSSQSYLAQSFRKYC 261 Query: 273 GLTPGEYSARFQG 285 G+T GEY + Sbjct: 262 GMTAGEYRRSKKN 274 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 89/256 (34%), Gaps = 15/256 (5%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKP--VMLLSLV 98 V + L + +G ++ + + G+++ + + + N+ +++ Sbjct: 36 VPLHWHNEMELIYIKKGCMIVSVDLEYSVVNAGDIVVVMPGHIHSIIQNESDSCEYENIL 95 Query: 99 FAPTWLGLSFYDSRTTSLL-----HPARQIQLPSLQRGEGEAMLTALTHLSR------SP 147 F L D T S + S ++ + Sbjct: 96 FNLDMLVSRQCDYDTVSFFNGIAGFNGYCPPVISKTAPHYSDLIHYIDEADNICKYFPDG 155 Query: 148 LEQNIIQPLVLSLLHLCRSVVNMP--PGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQ 205 I L L P + + N+++ N+A+ ++ E +AQ Sbjct: 156 YRLKIRACLFNFFFELNAHFYTHTDMPVHLSDDKMDKLKLVLNYIEKNFARAISIEEIAQ 215 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 + + + +H K F FI Y+ R+ A IL+ + VA CGF + YF Sbjct: 216 WCHFSQSHFMKFFKNCTGTSFITYLNDYRLIIAARILKTTTQPVIIVASDCGFDNISYFN 275 Query: 266 RVFRRQFGLTPGEYSA 281 R F+ ++G++P E+ Sbjct: 276 RKFKEKYGVSPREFRK 291 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 110/275 (40%), Gaps = 9/275 (3%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 + NPQ+L + + + DF + I+ G+ +E ++ L +G+M Sbjct: 3 KINTTTFNPQILYVANCYTNEVRI-GDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDM 61 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 L + + + L L Y T + + Sbjct: 62 LIFNPGVKHYDITEPGMTNAQLHIGFRNFTLEGYSRNTFPFKKAFLRKKEEDSAILSISK 121 Query: 136 MLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNS-------QPRGDFLYHSICN 188 + + + + ++ ++H+ R N+ + + L + I + Sbjct: 122 QIIEEKDAEKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIH 181 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +++ ++ + ++ +++Q I+P ++SK+F + I Y+ +R+++A +L+ +++ Sbjct: 182 YMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLSRAEELLKNKNIT 241 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGE-YSAR 282 + + A G+ D+ YF ++F++ +G P E + Sbjct: 242 VKQAANMVGYNDAYYFSKLFKKYYGFPPSENWRKS 276 >UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3766F Length = 286 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 97/279 (34%), Gaps = 13/279 (4%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 ++ + Q ++ + P + + I L + + + L E E+ Sbjct: 8 VYETVEYENQRFVMLYDNDEIEEYPT--HWHNAVEVIIPLHNGFTVVSGGVEYHLSEKEI 65 Query: 76 LFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 + IP + + + + + + A I + A Sbjct: 66 IVIPPGELHSM-PAQDGRRIIFQCDNSVISEVPSLESILPVFSSAVHITPSLNKELYVLA 124 Query: 136 MLTAL----THLSRSPLEQNIIQPLVLSLLHLCRSVV------NMPPGNSQPRGDFLYHS 185 L + S++P+ I ++++L R N + Sbjct: 125 RKNILDIYTEYYSKAPMADVRIYMYLITILTAIREFQLNSADENSASAAENSDESRKFGL 184 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + ++ NY L E +A + H S++F ++ M +I+Y+ R+ A ++ Sbjct: 185 VTKYINQNYMYELPLEKLASIAGYSKYHFSRIFKKYNNMSYIQYINSKRIKAAERLMADS 244 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 L I EVA +CGF F R FR+ G TP E+ F+ Sbjct: 245 SLPITEVAMQCGFSSLTTFNRAFRKAKGCTPTEFRKLFK 283 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 98/267 (36%), Gaps = 15/267 (5%) Query: 31 WFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANL--PVN 88 + V D IV G K+ L +GE +FI A + N Sbjct: 29 CYDDDLIKKSVPWHWHDEFEAVIVSEGTALIAAGTKKYTLKQGEGIFINAGILHAAWSKN 88 Query: 89 NKPVMLLSLVFAPTWLGLS----FYDSRTTSLLHPARQIQLPSL-----QRGEGEAMLTA 139 L S+ F P +G S F+ + LL + + A+ +A Sbjct: 89 CSICHLHSITFHPRLIGGSIDSIFWHNYVQPLLTNPIVKHIHLDSSEAWHKEATHAIESA 148 Query: 140 LTHLSRSP--LEQNIIQPLVLSLLHLCRS--VVNMPPGNSQPRGDFLYHSICNWVQDNYA 195 + P E + L +LHL V++ P R + ++QD+Y Sbjct: 149 WNSCANEPFGYEFQVHSSLSQLILHLSAYHPVISRQPSEKVLRNSNRLKLMLQFIQDHYH 208 Query: 196 QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQR 255 + +A I+ + + F + I+Y++ R+ KA L + +I ++ + Sbjct: 209 DQINVSMIADTAMISESECLRCFRNIIGIPPIQYLKQFRIQKAVEFLTSTNETITKIGAK 268 Query: 256 CGFPDSDYFCRVFRRQFGLTPGEYSAR 282 CGF D+ YF + FR Q TP EY Sbjct: 269 CGFQDTSYFVKTFREQKKCTPSEYRKN 295 >UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C6D193_PAESJ Length = 833 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 106/272 (38%), Gaps = 15/272 (5%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 + + L R++ + + L VL+G ++ +Q RL E +++ Sbjct: 5 YEFVETQDDLPVRLFVN---SVKDIRFHWHKEIELIYVLQGAVTVYVDQRQYRLAEDDII 61 Query: 77 FIPARAANLPVNNK-PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 I + + + +LL+L F P L D T + Q + + Sbjct: 62 AINSMSVHKLECTNLDNVLLTLQFGPELLD----DEGTLFDCNSMSQTEYNRYRYDRLRR 117 Query: 136 MLTALTHLSRS------PLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF-LYHSICN 188 L + S +Q L+ L + N P D+ + I Sbjct: 118 CLARMVWESNKKGPGHRNYSMGSLQTLIGHLTRYFTAGTNGGPREKGKDYDYMRLNRIIQ 177 Query: 189 WVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLS 248 +V +Y + +T +++A +++ ++ S F+ + F +Y+ +R+ KA L S Sbjct: 178 YVDKHYNEKITLQTIADQEHLSLHYFSHFFSDKIGIPFQKYLTLIRLEKAAAQLSDTDKS 237 Query: 249 IHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 + ++A CGF + F + F+ ++G TPG Y Sbjct: 238 MTQIALDCGFANVKLFNQYFKGKYGSTPGSYR 269 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 113/295 (38%), Gaps = 20/295 (6%) Query: 8 ADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQ 67 + Q F++ P +L + ++ L V RGE + + Sbjct: 38 SKQGFYSVNMESFGSKPVILVPHLYNPNYQD-ERLFHNHNYFELAYVYRGECVHATKENT 96 Query: 68 QRLVEGEMLFIPARAANLPVNNKP-VMLLSLVFAPTWLGLSFYDSRTTSLLHPAR----- 121 RL +G+ + + + P ++ +++ + + T + L Sbjct: 97 VRLHQGDAILMNPHVLHWMYTEHPQDVVFNIMLSKEIFQSDVFPCMTDNRLLFHFFLDYF 156 Query: 122 --------QIQLPSLQRGEGEAMLTALTHL--SRSPLEQNIIQPLVLSLLHLCRSVVNMP 171 + P + E ++ + ++I+ + L V Sbjct: 157 YQLNKLDDSLTFPHSPKHPIEPLIKLMVEEFIEDDLCYDSVIKAHCIQLFAYLARVYRER 216 Query: 172 PGNSQP--RGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEY 229 ++ + + +Q + Q L+ ES+A+ F+ +P+H+S+LF + E Sbjct: 217 YASTDADVELNQTVIHLIYHMQQHLRQ-LSLESLAEAFHYSPSHVSRLFRTRLGKSYTEV 275 Query: 230 VRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + +R+ A+ +L+ L + E+A G D+ Y ++F++++GLTP +Y +FQ Sbjct: 276 LNSLRIQTAKSLLETTSLPMGEIADSIGVNDTSYLNKIFKKKYGLTPLQYRKQFQ 330 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 103/271 (38%), Gaps = 9/271 (3%) Query: 19 GLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI 78 + ++ ++PV S + ++ G+ ++ + + EG+++ I Sbjct: 5 QYDNGEGTFSVSYRKARSHNMPV-SHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVII 63 Query: 79 PARAANLPVNNKPVMLLSLVFA---PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA 135 + N + L+ S+ D ++ R E Sbjct: 64 SPNILHRTTNTETPEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIET 123 Query: 136 MLTALTHL--SRSPLEQNIIQPLVLSLLHLCRSV---VNMPPGNSQPRGDFLYHSICNWV 190 ML + + P + L L LL +C +M S + ++ Sbjct: 124 MLQTMIAEMSEKKPGFELYALTLALQLLLICCRHAKSSSMETLESPSPMHERISEVVRYM 183 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 +Y L+ +A+ F ++P +LS+ F + F+EY+ VR+ +A+ +L++ + ++ Sbjct: 184 NSHYMNELSLHLLAEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVN 243 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +A+R GF +F RVF+ G P Y Sbjct: 244 LIAKRVGFGSVTHFGRVFKSVTGYVPLHYRK 274 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 107/252 (42%), Gaps = 12/252 (4%) Query: 40 PVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN-NKPVMLLSLV 98 + ++ + G+ K +++G+++ I +R + + N + + Sbjct: 32 NFKEHWHEHLQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYLESLNNDLRFYLIR 91 Query: 99 FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQR-GEGEAMLTALTHLSRSPLEQNIIQPL- 156 +L D T L P + + + ++ + + + ++ I L Sbjct: 92 IDLPFLFSDQVDLCQTKYLSPLSENLILFKNLIRNDDEIVRCIKTIIKEYNKKEIGYELA 151 Query: 157 ---------VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 VL + + V + D ++ + +V N+ + ++ +++ Sbjct: 152 VKANLYNLVVLLIRNYIDKFVTKRQLAFKINNDERFYKVFEFVHSNFNKKISTLNLSNIA 211 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 +++P + ++F Q EY+ VR+ K+ +L+ +++I EVA CGF D +YF R+ Sbjct: 212 HVSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVNYFSRL 271 Query: 268 FRRQFGLTPGEY 279 F++++G++P ++ Sbjct: 272 FKKKYGVSPTKF 283 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 110/273 (40%), Gaps = 14/273 (5%) Query: 25 QLLGRVWFASQPASLPVG-SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAA 83 + L + + + + L + GE ++ ++ + G+++ IPA Sbjct: 13 EDLFFLEYNKRKGHFTMSVEHIHGQYELYYLFSGERQYFIKDRKYPIAAGDLVLIPANEL 72 Query: 84 NLPVNNK--PVMLLSLVFAPTWL---GLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLT 138 + + + L + + G + + L R +L +R E +L Sbjct: 73 HKTSDTGVPNHARIVLYYNEKYFEQYGKEESELLLSPFLGSRRVFRLAHQERLRFEQLLY 132 Query: 139 ALTHLSRS---PLEQNIIQPLVLSLLHLCRSVVNMPPGNSQ-----PRGDFLYHSICNWV 190 L + E I + +LL R ++ P S I ++V Sbjct: 133 GLLQEVQERPPGHEMPIRHAVAEALLFAARHAIHNKPDPSDGSVPPSPAAAKAMEIASYV 192 Query: 191 QDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH 250 D++ +PLT +S+++ F+++ ++LS+ F ++ EY+ R+ +A+ L++ I Sbjct: 193 ADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIGITRVKEAQHQLRETDERIT 252 Query: 251 EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 E+A GF F RVF+ L+P +Y ++ Sbjct: 253 EIAAEVGFESLSQFERVFKTHIRLSPRDYRNQY 285 >UniRef50_A9KRM0 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=A9KRM0_CLOPH Length = 296 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 100/283 (35%), Gaps = 13/283 (4%) Query: 12 FFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLV 71 + + + R++ + P+ + + + Y ++ + L Sbjct: 4 ILNGTRETVSYDENIGIRLYLNEEYEDYPI--HWHTAAEIIMPIENTYEVVVNNIRHELE 61 Query: 72 EGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ---LPSL 128 G+++ +P+ + + F + L + HP I +P + Sbjct: 62 VGDIILLPSGELHQLYAPTKGKRIIFQFDYSLLYNLTGFDSVFHMFHPCTLITNETMPDI 121 Query: 129 QRGEGEAMLTALTHLS-RSPLEQNIIQPLVLSLLHLCRSVV----NMPPGNSQPRGDFLY 183 ML + SPL++ I ++++ + P P+ Sbjct: 122 HDNLHSLMLRIMDEYFGDSPLKEAAIYSMLVNFFVILGRNYITSEKKFPNTKSPKRHEYI 181 Query: 184 HS---ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 +C + ++ +P+ + +AQ + H +LF + + + +Y+ R+ A Sbjct: 182 DKFLMVCTHINEHCTEPINVDDLAQLAGFSKYHFMRLFKEFSGISYYDYLNKQRIMHAEK 241 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +L +L+I E+A GF F R+F+ Q TP EY Sbjct: 242 LLIDPNLTITEIAMHSGFNSLATFNRIFKEQKQCTPSEYKRLH 284 >UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMH3_9PLAN Length = 294 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 103/283 (36%), Gaps = 19/283 (6%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 F LV P R F P + V G L+ R G+++ Sbjct: 5 FEKLVPPPGHSFR-CFERSALETPAKWHRHPELEITYVPYGTGTRLVGDHVARYSPGDLV 63 Query: 77 FIPARAANLPVNNK-------PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQ 129 + +++ + + F+ +LG +F++S + + + Sbjct: 64 LSGENLPHTWLSDDFVGKKFDRHIAYVIQFSNDFLGSTFFESPELNDVRLM--LHKARRG 121 Query: 130 RGEGEAMLTALTHLSRSPLEQNIIQPLVLSL--LHLCRS------VVNMPPGNSQPRGDF 181 + + + + + EQ + L+ L+L D+ Sbjct: 122 LLFSPSAVQRVGDIMKLMPEQQGLTQLISLFNCLNLLAEEGGEVLASEGYTPGFDHASDW 181 Query: 182 LYHSICNWVQDNYAQP-LTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM 240 CN++ ++ P L+ ++ + ++ P+ S++F + +YV +R+ A Sbjct: 182 RIDKACNYINEHLEDPELSHAAICKEVDMNPSSFSRMFKRATGRTVTQYVSELRIGIACR 241 Query: 241 ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 +L + SI +V+ + GF + F R FR+ +TP EY + F Sbjct: 242 LLMETGDSILDVSLKSGFDNLSSFNRSFRKIKQMTPREYRSTF 284 >UniRef50_C0EHT5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHT5_9CLOT Length = 318 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 104/273 (38%), Gaps = 22/273 (8%) Query: 29 RVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVN 88 ++ + DF + V G N+++ K+ L +G++ I A + + Sbjct: 44 QIGVLPHNSHGNTPLHQHDFFEMVYVHEGYCDNMIDNKKVSLTKGDICLINTYAVHTLLC 103 Query: 89 NKPV--MLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAML--------- 137 + P ++ +++ + + + + + QR + ++ Sbjct: 104 DDPDNAVIFNIMIGAEMMNAAHFRLLSYNDFVADFFFHSLEKQRDDDNYLIFHQSEKENA 163 Query: 138 ----------TALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSIC 187 H E I+ L+ L RS M + + Sbjct: 164 ANNLCVQLINEYYGHEEDLYQESKILHLFDCILIELTRSYQKMKDHPLGKKDSLKVSDMI 223 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++++Y +T +S+A +F P H S++ Q F + + +RM A+ +LQ L Sbjct: 224 YYIENHY-NSVTLKSIADYFGYHPKHFSRIIHQATGQTFTDLLLDLRMRCAKELLQNNSL 282 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 SI E+ + G+ + +F F+++F ++P +Y Sbjct: 283 SITEIMHQVGYHNYKWFSNQFQKKFDMSPKKYR 315 >UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU Length = 267 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 90/251 (35%), Gaps = 7/251 (2%) Query: 37 ASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN--KPVML 94 + G L L G+ + + ++ G+ I + +P Sbjct: 6 PNYSYGPAVRPNYLLHYCLSGQGEYHVNNQVYQIKAGDAFLIMPNVVTYYQADQHEPWTY 65 Query: 95 LSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQ 154 L + F G L + E + L H S + IQ Sbjct: 66 LWISFD----GSKTRQYLKRCNLDEHNLVVHCDYINELRETTIAILAHNKLSYSNELFIQ 121 Query: 155 PLVLSLLHLCRSVVNMP-PGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 + + N+ N P + ++Q+NY + +T +A + ++ ++ Sbjct: 122 GQLYTFFSFLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNRSY 181 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 L+ LF +H + E++ RM +A +L L+I+++A CG+ + F + F Sbjct: 182 LTTLFKKHLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNSHQ 241 Query: 274 LTPGEYSARFQ 284 + P +Y +F+ Sbjct: 242 MAPRDYRKQFK 252 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 102/287 (35%), Gaps = 16/287 (5%) Query: 12 FFADLFSGLVLNPQLLGRVWFASQPASLPVG---SLCIDFPRLDIVLRGEYGNLLEAKQQ 68 D + N S + P + ++L G+ + K Sbjct: 6 LLNDNSEVVSYNFADFPIRAKKSLLSDYPTMAAANHWHTDWEFILLLNGKMSYSVNGKSY 65 Query: 69 RLVEGEMLFIPARAANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLL------HPA 120 L EG+ +FI + + + + ++F P+ + T L +P Sbjct: 66 ELQEGQAIFINSEQMHYGYSADGSDCNFICILFPPSLISSITRIKETYILPVCEDTSNPF 125 Query: 121 RQIQLPSLQRGEGEAMLT---ALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMP--PGNS 175 + + +L L + + E +++ L ++ + + Sbjct: 126 FILHPEITWQRNLIELLKNVYELCNEEKDGFELHVMSLFNTICFSLYNNIKDSISIQETA 185 Query: 176 QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRM 235 + H++ ++Q NY + +T +A N+ + +F + Y+ R+ Sbjct: 186 DDKKLEAMHNMTGYIQKNYQKRITLNEIAAAGNVCRSSCCDIFKLILNKTPVSYLTEYRL 245 Query: 236 AKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 K+ +L+ LS+ E+A +CGF S YF +F + G TP +Y + Sbjct: 246 EKSIELLKISSLSVTEIALQCGFTGSSYFTEIFHKTLGCTPSQYRRK 292 >UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEF5_ALKOO Length = 854 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 101/255 (39%), Gaps = 13/255 (5%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV-NNKPVMLLSLVF 99 + +VL+G + + L E +++ I + +LLSL Sbjct: 26 FKVHWHSAVEILLVLQGNVSLGVGDHKYLLKENDLILINYNEIYSITRGKEDNLLLSLQI 85 Query: 100 APTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTAL-----THLSRSPLEQNIIQ 154 P + LS YD + L+ + + + + + + + + P Q I Sbjct: 86 DP--VTLSQYDPNFSRLVFDCKSFMYCKDNQEKFDVVRYYMAKVVWEYSKKKPGYQLRIA 143 Query: 155 PLVLSLLHLC-----RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNI 209 + L +N + + I +++ +N + ++ +++A+ +I Sbjct: 144 SNIHLLAAHLVNNLTNENLNQLKSEIKDKDLARLKRILSYINENIDKKISLKTIAKNEHI 203 Query: 210 TPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFR 269 + +LS+ + + F EY+ +R+ KA +L + +I EV+ GF + F ++F+ Sbjct: 204 SYFYLSRFIKDNLGVTFQEYINTLRLDKAVNLLLSSNKTITEVSYESGFANIKLFNKLFK 263 Query: 270 RQFGLTPGEYSARFQ 284 FG +P +Y + Sbjct: 264 ETFGASPLQYKKIHK 278 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 99/258 (38%), Gaps = 15/258 (5%) Query: 40 PVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPV--NNKPVMLLSL 97 + + + V G L+ L EG+ +FI + + ++ +L SL Sbjct: 41 DISWHWHEEIEVIRVKSGSIHLYLDNSDFVLNEGDGVFINSNILHYIRAGTSEECILNSL 100 Query: 98 VFAPTWLGLSFYDSRTTSLLHPARQ---------IQLPSLQRGEGEAMLTALTHLSRSPL 148 VF + + ++P + + S + A + +S Sbjct: 101 VFNKNLISGGVQSVFEQNFVNPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEF 160 Query: 149 -EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGD---FLYHSICNWVQDNYAQPLTRESVA 204 + +++ + + ++ + N R D +I ++V NY + +T +A Sbjct: 161 GYEILVREYLSHIWYIMLKNIQDLNLNKNNRNDLNSERIKNILSFVHKNYNKQITLNDIA 220 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 + N++ + F + I+Y+ R++ A +L++ I ++ GF YF Sbjct: 221 KVVNLSERECLRCFKNTLGISPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSPSYF 280 Query: 265 CRVFRRQFGLTPGEYSAR 282 ++F+R G+TP +Y + Sbjct: 281 SKIFKRFIGITPTQYRNK 298 >UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCV1_BACSK Length = 293 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 91/258 (35%), Gaps = 12/258 (4%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPV 92 P L IV G ++ + + +G + F + P + P Sbjct: 26 YPTDYNGYYHWHQGCELLIVFDGAGSVVVNQQMSPIKKGMLFFFQPFQLHHVAPASAAPY 85 Query: 93 MLLSLVFAPTW----------LGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTH 142 +L F P + F + P M + Sbjct: 86 ERATLHFDPLHAEKRLTAYPAMAQFFRQLKNGYNQDPFIDFSEDYFYIRSLCDMHDKMAE 145 Query: 143 LSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRES 202 + + L++ LL + + P + R I W++D+ +P Sbjct: 146 AASINERAEREELLLIQLLSYMQHQLKGRPPTKKLRHIHYAERIMGWIEDHLTEPFNLSL 205 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 +AQ ++ +++SK+F + +Y+ RM +A +LQ L I E++QR G + Sbjct: 206 LAQDLYLSKSYVSKVFRRETGSSITDYLTARRMKEACHLLQTTSLPIDEISQRIGLTNVS 265 Query: 263 YFCRVFRRQFGLTPGEYS 280 YF ++F+R+ TP +Y Sbjct: 266 YFIQMFKRKTNATPHQYR 283 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 104/279 (37%), Gaps = 11/279 (3%) Query: 10 QQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQR 69 FS L + + + F + + G LE Sbjct: 6 YLIDDKNFSDFNFE---LLYITKSKFENDWHSTAHIHPFMEIFFITEGNGSFQLEDSTVN 62 Query: 70 LVEGEMLFIPARAANLPVNN-KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSL 128 + E +++ I + +N L +V ++F++ + Sbjct: 63 VKEYDLIIINPNCLHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHVIN 122 Query: 129 QRGEGEAMLTALTHLSRSPLEQNIIQP------LVLSLLHLCRSVVNMPPGNSQPRGDFL 182 + +L L + +N L L +L++ R++ +M ++ + L Sbjct: 123 LKKNSSIILNQLNLIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKNLNL 182 Query: 183 -YHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMI 241 I N++ +Y++ +T E+++ + L F + M I Y+ R+ +A+ + Sbjct: 183 ECAKIKNYLDSHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEAKSL 242 Query: 242 LQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 L+ + SI ++ GF +S YF ++F++Q L+P +Y Sbjct: 243 LETTNYSIKDIGSIVGFSNSSYFSQMFKKQTNLSPKQYK 281 >UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C7G9X0_9FIRM Length = 303 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 102/283 (36%), Gaps = 14/283 (4%) Query: 14 ADLFSGLVLNPQLLGRVWFASQPASLPVG---SLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 L + ++ G L+ + L Sbjct: 15 ETLRETIQHGNNRYPFAYYPDNIWKFDFHRIDWHWHHELEFLYTAEGTALCLIGTSKIEL 74 Query: 71 VEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLG---LSFYDSRTTSLLHPARQIQLPS 127 +G +FI + + ++VF+PT L Y+ ++ + Q+ S Sbjct: 75 HKGCGIFINSGVLHRFEAQSSTFAPNIVFSPTLLAPENSLIYEKYILPVISSSVPYQVFS 134 Query: 128 LQRGEGEAMLTALTHL----SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQ----PRG 179 G+ +L L+ + P + L+ L ++ + ++ ++ Sbjct: 135 PSNTFGKQVLQLLSQICTIQETKPDNELCTIQLLFQLWNILQKNMDWTSDSNSIHRLNHK 194 Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 ++ ++ D+Y + +T E++A +I+ + +F + Y+ R+A+A Sbjct: 195 QARLQAMMQYIHDHYMEEITLETIAASASISKSGALHIFQTGIHCSPVAYLIQYRLAQAA 254 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 L S+ +A+ GF S YFCR FR+ + ++P EY R Sbjct: 255 EQLYITQKSVSSIAEETGFTSSGYFCRKFRQYYHMSPNEYRKR 297 >UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C2KAS7_9FLAO Length = 311 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 92/272 (33%), Gaps = 14/272 (5%) Query: 25 QLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN 84 + F + L V +G + + EG+++ I + + Sbjct: 38 SSFTSLKFLTNENIKSHVWHYHPEVELIFVCKGSGKRQIGSSITYFSEGDLVLIGSNLPH 97 Query: 85 LP---VNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALT 141 + + + F P +LG +D + ++ GE + + Sbjct: 98 CGLTNESTHNEYEMVIQFKPDFLGEPIWDIPEMQRISAL--LEKSKAGIVFGEEVKKRIG 155 Query: 142 HLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPG---------NSQPRGDFLYHSICNWVQD 192 E + + L L L V +Q + + I N+V+D Sbjct: 156 KEITEMHETSSLDKLCRFLKILDELSVTQDYRILNAGKYYLQTQVEDNERINLIFNYVKD 215 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 ++ + +T E VA N+ + F + F ++V R+ A +L + LSI EV Sbjct: 216 HFKEAITLEEVADLANMKVPSFCRYFKKITNKTFTQFVNEYRITHALKLLAEQPLSITEV 275 Query: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 GF + YF R F+ +P +Y F Sbjct: 276 CFESGFNNFSYFNRTFKEYIQKSPSQYRKEFN 307 >UniRef50_A8SUZ2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SUZ2_9FIRM Length = 298 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 109/281 (38%), Gaps = 17/281 (6%) Query: 22 LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPAR 81 LN ++ A P+ F + ++ G+ + L G+++ + Sbjct: 11 LNKPYEAFLFDAQTSEMFPILPHWHYFVEILYMVEGKAYVEAGEENYVLEPGDLIVFYPQ 70 Query: 82 AANLPVNNK--PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ-----LPSLQRGEGE 134 A+ + P+ L F P L +S + S L ++ S ++ E Sbjct: 71 MAHAIYSTGQLPIRYYVLKFDPAHLNISGSALPSISSLIAMAAVEQKLSVYFSKEKFNQE 130 Query: 135 AMLTALTHLSRSPLEQNIIQPLVL----------SLLHLCRSVVNMPPGNSQPRGDFLYH 184 M + ++ E+ +++ L + + + + Sbjct: 131 KMKQLIQGSVKALEEKQFGYDIIMHSNYCLLMAEILRIWKQEGFQIKKRKKETVLSEKFT 190 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 + ++ +Y + L+ +A+ F+++ ++ + +F ++ E + VR+ KA +LQ Sbjct: 191 EVSEYISQHYQEDLSVAELAEKFHMSYSYFAAIFKEYYGQTCKEMILTVRLQKAEDLLQF 250 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 + ++Q GF D +F + F++++G+TP +Y + + Sbjct: 251 TDFDLTYISQETGFCDCSHFIKAFKQKYGVTPRKYRMKEKS 291 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 13/279 (4%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEM 75 + + + +L +++ A P D + VL G+ + L +GEM Sbjct: 2 KYEIINYDEKLPIKIFVAKLNNYPP---HWHDEIEIVKVLEGKIKVSISESVCFLEKGEM 58 Query: 76 LFIPARAANLPVNNKPVMLLSLV-FAPTWLGLSFYDSRTTSLLHPARQIQLPSLQR--GE 132 I + + + + LL ++ ++ F S + I Sbjct: 59 AIIKHKEIHQIQSLENESLLQIIQINYKFMETHFPHLSRISFENNLLNISKDINLNVASN 118 Query: 133 GEAMLTALTHLS---RSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDF----LYHS 185 + ++ + + E ++I + + +V + + Sbjct: 119 LKQLINEMINYLSVRNQGYEFHVISAIYKVFGSIISNVPYTISTEDELEKNNITFNRMKK 178 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 I +++ NY + ++A+ ++ +++ F +H + +Y+ +RM KA +L K Sbjct: 179 IIEYIEQNYMNEININTLAEILHLNKYYIAHFFKKHTGLSLGQYITNLRMNKATELLIKN 238 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 SI + CGF + YF +VFR + +P EY Q Sbjct: 239 EDSITNIILSCGFKNIKYFYKVFREVYKCSPLEYKNNRQ 277 >UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PTM2_CHIPD Length = 291 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNK-----PVMLL 95 L ++L G + G++ F + N + + Sbjct: 27 FPLHFHPEYELILILNGSGKRFVGNNIAEFSSGDLCFFGPNLPHTYSNKHIAGPRDIHQI 86 Query: 96 SLVFAPTWLGLSFYDSRTTSLLH-----PARQIQLPSLQRGEGEAMLTALTHLSRSPLEQ 150 + F +LG F+D + R E M+ A+ + E Sbjct: 87 VVQFNEDFLGKGFFDKAPFKPIRALLDKSIRGFTFTGETLQEVTRMIRAMVEMD----ET 142 Query: 151 NIIQPLVLSLLHLCRS------VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVA 204 ++ L+ L L +S S + +++ N+ + + +A Sbjct: 143 AVVIQLLSVLYTLAKSAEFELLSSRGFSSKSDRAESERMGRVMDYILRNFREEIPLNVIA 202 Query: 205 QFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYF 264 ++P + F ++ F E++ VR+ A +LQ+ L +++++ + GF + YF Sbjct: 203 SVACLSPEAFCRYFKKYTRKTFSEFLIEVRIGHACKLLQQQLLGVNQISMQSGFNNISYF 262 Query: 265 CRVFRRQFGLTPGEYSARF 283 R F+ TP EY F Sbjct: 263 NRKFKSMTKKTPVEYQKMF 281 >UniRef50_C4Z2W7 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z2W7_EUBE2 Length = 273 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 88/250 (35%), Gaps = 8/250 (3%) Query: 42 GSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAAN--LPVNNKPVMLLSLVF 99 + L + G + + L G + I A+ + L F Sbjct: 24 HFHEHNKWELMFIYSGSCTLYVGDEIYMLNPGGLALISPDTAHMTTYLAGSDHTRYVLYF 83 Query: 100 APTWLGL--SFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSR--SPLEQNIIQP 155 L S+ H I +P + +++ +++ L + I Sbjct: 84 NNDELKWIADDSSLDIESIFHEHPVIHIPERRLDYISSIIQKISYEHNGVDSLSLSFIHS 143 Query: 156 LVLSLLHLCRS--VVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 L+ + G+ L + ++ +NY +T + A+ FN++ + Sbjct: 144 YFHELILFILRCQMYEDNVITKMDTGNELIQKVIEYIIENYHNDITMAATAELFNMSESS 203 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 LSK F RF EY+ VR A +L LSI E+A +CGF DS+ F++ G Sbjct: 204 LSKKFKAFTGFRFREYLINVRTHAAADLLVNTSLSITEIADKCGFADSNTMGGTFKKIMG 263 Query: 274 LTPGEYSARF 283 PG Y Sbjct: 264 EAPGSYRKSH 273 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 90/257 (35%), Gaps = 13/257 (5%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFA 100 + + + + G + K+ R+ G+ L I + + + L SLVF Sbjct: 42 IPWHWHEELEVIFLPSGTLDVRVPGKRFRMNAGDCLVINSNILHEAETSNECRLHSLVFH 101 Query: 101 PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEA-----------MLTALTHLSRSPLE 149 + S ++P E M +R E Sbjct: 102 TDLISGSDSSVFYKKYMYPLISSCTLDCVLFSAEDTSGVSIRQCFMMAFDALANNREGYE 161 Query: 150 QNIIQPL--VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFF 207 + + L + LL + F + + +Q YA+PL +AQ Sbjct: 162 FTVRECLSRLCFLLCTFYKPEISDTSAKPDQDSFRIKEMIHMIQSRYAEPLKLCDIAQAA 221 Query: 208 NITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRV 267 NI + F + + ++Y+ R++K ++L + SI E++ RCGF F Sbjct: 222 NIGERECLRCFHRTLGISPMQYLIRYRLSKGALLLINTNKSIAEISTRCGFDSPSNFSLT 281 Query: 268 FRRQFGLTPGEYSARFQ 284 F+R++ +P EY + Sbjct: 282 FKRKYQCSPREYRKNNK 298 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 98/240 (40%), Gaps = 14/240 (5%) Query: 51 LDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN--KPVMLLSLVFAPTWLGLSF 108 L IVL G+ +++ K+ L +G+ I + P + F Sbjct: 38 LHIVLEGKGIFVVDNKKYFLEKGQGFIIEPNIVTFYQADAKNPWKYFWIGFD-------- 89 Query: 109 YDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRS----PLEQNIIQPLVLSLLHLC 164 + L P + + + + + L + + E+ +Q L L Sbjct: 90 GEGAEKYLRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNLTLAEELKLQGLFYEFFSLI 149 Query: 165 RSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTM 224 ++ + + + I ++++NY + ++ ++ + ++LS LF ++ + Sbjct: 150 VEENSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVGLNRSYLSTLFKKNMGI 209 Query: 225 RFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 EY+ R+++A +L + SI VA CG+ D F + +++++G+TP ++ + + Sbjct: 210 TIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTKAYKKKYGVTPTQHRKKDR 269 >UniRef50_UPI0001C35ADD AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35ADD Length = 304 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 113/278 (40%), Gaps = 14/278 (5%) Query: 17 FSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 N Q+ ++ + + +D +L E + K++++ G + Sbjct: 6 HETFTQNEQMPMQLRLHRGQINYMILEHWHRSIEIDYLLDCEADFYINGKKKQVAAGSIT 65 Query: 77 FIPARAANLPVN-----NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRG 131 I + + + + + ++ F + +++ + Sbjct: 66 LINSGDIHALEPREVPVDTEDKIHGISL---FISYEFLKKICPEIDQITFELEGQEERLK 122 Query: 132 EGEAMLTALTHLSRSPLEQNII---QPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHS--- 185 E + + +L L +P E+ ++ SL++L + P S + Sbjct: 123 ELKEVFNSLIRLELAPPEEYGYLKKNAMLHSLMYLLLTYFKEPRNQSSVKSQKYIDRLRV 182 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 + ++V++NY +PLT + VA F+++ +L+++ ++ F ++ VR++KA L + Sbjct: 183 VLDYVEENYREPLTLQGVADHFSVSMEYLARILKKYTGNTFKTHLNQVRVSKAFRDLLET 242 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARF 283 S+ E+A R GF D+ VFR +G+TP +Y + Sbjct: 243 DYSVLEIAMRNGFSDTRSLINVFRDTYGMTPSQYRKKN 280 >UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RH22_CLOCL Length = 278 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 91/268 (33%), Gaps = 6/268 (2%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVGSL---CIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 + S + V+ +P D + +L G+ K LV Sbjct: 8 IISESINKENRDLLVYHHGIEQCIPKHCYGPAIRDHYLIHYILAGKGKFHANGKIYELVT 67 Query: 73 GEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGE 132 G+ I ++ + + + Y S + Sbjct: 68 GDGFLILPDMVTFYEADENEPWTYVWIGFRGIKAAAY---LESANLNMNNLIFNCTSEIL 124 Query: 133 GEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQD 192 E + S + +Q + +L + M ++ D +++ Sbjct: 125 KEYFFKIMNANLYSSGYELRLQGYLSIILSELIDISAMDILDTNKHSDIYVRKALQYIET 184 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 NY+ + ++VA+ + N+ S +F +H + EY+ ++ KA L+ L+I E+ Sbjct: 185 NYSGSTSVDAVAKAIGLNRNYFSTIFKKHIGISPKEYIIRYKIGKACEFLKNNSLTISEI 244 Query: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 ++ G+ D F +VF+ G++P Y Sbjct: 245 SKSVGYNDPLSFSKVFKHIKGVSPKYYR 272 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 103/280 (36%), Gaps = 7/280 (2%) Query: 8 ADQQFFA-DLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEA- 65 ++Q+F+ S + L P G+ P + +L G L Sbjct: 2 SEQEFYVFHNISSVDLYPIQFGKEKCDPWHHYGPTLTHN---YLFHYILSGRGSFLENER 58 Query: 66 -KQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQ 124 + +L G+ +P ++ L + + + + Sbjct: 59 HEAIQLGPGQGFLMPPNTVCSYTADQDDPWTYCWIEFNGLKAANFMRQAGLNANNLIFTP 118 Query: 125 LPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYH 184 + + L + + S E +I L L + HL R + P F Sbjct: 119 HKPMIISSIKDTLETIIR-NHSQHESFLIAQLYLLVDHLIRFSKHSPQQRPNEIHSFYIR 177 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 +++QD+Y + + +A ++ N+ ++LF Q M +++ R+ ++ +L Sbjct: 178 EAIHYIQDHYMDNPSVDQLADICHLNRNYFTRLFKQELHMTPSQFILTYRINQSCELLAS 237 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 + SI ++A + G+ + F F+R G+TP E+ R++ Sbjct: 238 TNRSIRDIADQIGYSNQFNFSSAFKRVKGMTPMEWRRRYR 277 >UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KTC0_CLOPH Length = 298 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 109/289 (37%), Gaps = 22/289 (7%) Query: 10 QQFFADLFSGLVLNPQLLGRVWFASQPASLPVG-SLCIDFPRLDIVLRGEYGNLLEAKQQ 68 Q F + +G+ + + + D + +L GE +E + Sbjct: 3 QIVFEESLNGIT--------IDRIIRDYEYNMPTKHFHDEYEVYYLLEGERYYFIEHQTY 54 Query: 69 RLVEGEMLFIPARAANLPVNNKPVMLLSLVFAP------TWLGLSFYDSRTTSLLHPARQ 122 + +G ++F+ + ++ ++ S Sbjct: 55 LVKKGSLVFVNRGQIHKTGLAGTSYHDRILIELKEEPFASFFSFFGDLSLKDFFSKHYGV 114 Query: 123 IQLPSLQRGEGEAMLTALTHLSRSPL-------EQNIIQPLVLSLLHLCRSVVNMPPGNS 175 ++L + E +LT+++ ++ + + L+ S+ + +P + Sbjct: 115 LELEEKDQRRIERLLTSISTEIQNKSIGFEISVMMKLAKLLIFSMRCKADTNTFIPATTA 174 Query: 176 QPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRM 235 + +++ +N P++ +++++ F ++ +LS++F + EY+ R+ Sbjct: 175 TTAKHRKVDEVASYIVNNCTNPISLDALSKHFFVSKCYLSRIFKEVTGFTVNEYINIHRV 234 Query: 236 AKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 KA+ +L +I E++ + GF YF RVF++ +P +Y + + Sbjct: 235 QKAQYLLLYSESNISEISAQLGFESITYFERVFKKYTESSPLKYRKQNR 283 >UniRef50_C6DJR5 HTH-type transcriptional activator rhaR n=5 Tax=Pectobacterium RepID=RHAR_PECCP Length = 284 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 4/258 (1%) Query: 30 VWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN 89 V A + DF L IV RG +L R+ G+M ++ A + + Sbjct: 23 VMVAERHPQPVFPLHHHDFDELVIVWRGNGLHLWNDVPYRITRGDMFYVSANDRHSYESV 82 Query: 90 KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLE 149 + L ++++ L LS R + + L + + + L + ++ Sbjct: 83 HGLELDNILYIRNRLTLSADWQRLLPGGEHPQSQRHWCLGSEGMDTLREKVDALRQECMK 142 Query: 150 QNIIQPLVLSLLHLCRSV----VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQ 205 + + + L L ++ P N Q + N ++ + A P E+ + Sbjct: 143 SDALSLQLSEALLLQIALLAARYRHTPDNPQLADAHQLDMLMNALRASIAAPFRFEAFCE 202 Query: 206 FFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFC 265 + + L F + M Y+R +R+ KA +L+ +I ++A CGF DS+YF Sbjct: 203 QHHFSARSLRSRFKEQTGMSVPHYLRQLRLCKAMELLRYDLQTIGDIAALCGFEDSNYFS 262 Query: 266 RVFRRQFGLTPGEYSARF 283 VF + FG++P Y RF Sbjct: 263 VVFHQAFGVSPSAYRQRF 280 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 88/248 (35%), Gaps = 9/248 (3%) Query: 39 LPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNK--PVMLLS 96 G + + IV +G+ + K L G+ I + + P + Sbjct: 66 WKFGPYVRESYVIHIVKKGKGVFTIGGKSYELEAGQAFIIRPGEETIYKADDDDPWSYMW 125 Query: 97 LVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPL 156 + F G D + I + L + + + + Q Sbjct: 126 VGFH----GYRAEDFIESMGYKKDSPIIKIEQMDTCATCINNMLEYSQITRINEVKRQSA 181 Query: 157 VLSLLHLCRSVV---NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNH 213 ++ L N + + +++ + Y + + +A F I+ +H Sbjct: 182 LMMLFATIMEDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFIGISRSH 241 Query: 214 LSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFG 273 L+ F + + EY+ R+ KA +L+ I+ +A +CG+ DS F + F+++FG Sbjct: 242 LTGSFKKEMGVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQKFG 301 Query: 274 LTPGEYSA 281 ++P + Sbjct: 302 MSPKSFRN 309 >UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVH4_PAESJ Length = 287 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 107/273 (39%), Gaps = 11/273 (4%) Query: 20 LVLNPQLLGRVWFASQPASLPVG---SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEML 76 + N + V FA + + P DF + VL G+ K L G+ Sbjct: 14 ITYNEHM--NVLFAGESQTKPSHQRGPKVYDFYLMHTVLEGKGEFTCGGKSYPLQAGDTF 71 Query: 77 FIPARAANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGE 134 I A ++ ++P + + F + S+ +P + Sbjct: 72 LIEPEALVSYISNADEPWLYRWVAFNGPQ-AAELAQAAGFSVANPVAETAAIRRVGVLYN 130 Query: 135 AMLTAL--THLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQD 192 + + + +Q L+ + + + + D L + +++ Sbjct: 131 HIFSIFRKNDPAAHLKAAGYLQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIHYLST 190 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYH-LSIHE 251 YAQP++ E +A+ F +LS++F ++ I ++ +R+ KAR ++++ L+I + Sbjct: 191 QYAQPVSIEQMAESFGYNRAYLSRVFKRYTGESPITFLLKLRIDKARQMIREREGLTIEQ 250 Query: 252 VAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +A G DS YF + FRR +GL+P Y + Sbjct: 251 IAASVGLQDSLYFSKQFRRFYGLSPSAYRESMR 283 >UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9W6_OXAFO Length = 293 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 101/250 (40%), Gaps = 9/250 (3%) Query: 44 LCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTW 103 + + VL GE ++ +L G +FI + + S +F + Sbjct: 44 HWHEDLQFIYVLEGEIEVRTLDEELKLAAGHGVFINKNVVHSVNQSGDCHYKSFIFPDYF 103 Query: 104 LGLSF-------YDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPL 156 L F DS ++ P + ++L L+ L ++ E + + L Sbjct: 104 LRFYFGSPAEHLVDSLVENMDVPLCRFIPGIGWCDTVLSILRKLSFLEKNGNEFYVYEVL 163 Query: 157 --VLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHL 214 + SL R V++P G + +++ +YA+ ++ + +A N++ + Sbjct: 164 VFLTSLWLEIRKNVSLPSGKKEKPVSRRMQRFLAYIEKHYAEAISLDDLAGSGNVSKSEC 223 Query: 215 SKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGL 274 + F +Y+ R++KA ++LQ+ + E+A GF + YF + FR + G Sbjct: 224 LRCFRVSMQTTPYKYLVEYRLSKAAILLQETDKPVGEIASCTGFHQASYFGKCFREKTGF 283 Query: 275 TPGEYSARFQ 284 +P +Y + Q Sbjct: 284 SPRDYRGKNQ 293 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 102/279 (36%), Gaps = 13/279 (4%) Query: 16 LFSGLVLNPQLLGRVWFASQPASLPVG---SLCIDFPRLDIVLRGEYGNLLEA-----KQ 67 LFS + ++ P+ + V+ G + Sbjct: 5 LFSIFPNERFVDLGLYQYGWEQCEPLHSYGPYARNHYLFHYVISGAGTLMSTDSKGMTNT 64 Query: 68 QRLVEGEMLFIPARAANLPVNN--KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQL 125 + GE I + N + P L F + + + ++ +P Sbjct: 65 YHIKSGEGFLIHPKQVNTYSADRDHPWEYTWLEFDGLRVKEAL-ELAGLTMDNPVYHSNA 123 Query: 126 PSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHS 185 L ML H +SP ++I L L L +L RS + DF Sbjct: 124 RDLSLELKNEMLYIANHSDQSPF--HLIGHLYLFLDYLTRSSSSRRMMRGGKLQDFYIRE 181 Query: 186 ICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKY 245 ++++ N+ ++ E +A F N+ ++ K+F E++ RM KA +L+ Sbjct: 182 ATSFIEQNFQNDISVEDIAAFCNLNRSYFGKIFRDAVGKSPQEFLISYRMTKAAELLKLT 241 Query: 246 HLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 L+I ++ G+P +F R F++ +G++P E+ + + Sbjct: 242 ELTIKDIGNAVGYPSQLHFSRAFKKTYGISPREWRSENK 280 >UniRef50_C3RI67 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RI67_9MOLU Length = 263 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 104/272 (38%), Gaps = 11/272 (4%) Query: 11 QFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRL 70 L+ + + + ++W S + D L +G + + +++ + Sbjct: 1 MIMQHLYEVVETSFKYPIKIWNHQFNRSKVMKPHWHDEIELIYCNQGSFELSVNGEKKFV 60 Query: 71 VEGEMLFIPARAANLPVNNKP-VMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQ 129 +++ I + + + + +++L+ + L+ + L Q Sbjct: 61 NTKQLVLINSNSIHRLRFLEDQTKIITLLLSTELFD-------EFKLVQCEFDLSLIKDQ 113 Query: 130 RGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNW 189 + ++ HL + L +I ++ + L ++ + + I + Sbjct: 114 EQLEQLIIYLGDHLDQETL---VIHNRMMQIYELLLEECSVYKLAITKKKLPIIKQIVTY 170 Query: 190 VQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 ++ +Y L+ +A F+ + +LS++F + + + Y+ +R+ A L L+I Sbjct: 171 IEQHYDDELSLTILANHFHFSEVYLSRMFKEKTGITLLSYINKIRLNHAYNDLMNTSLTI 230 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 +E+A GF + F ++F+ + P +Y Sbjct: 231 NEIALNHGFKNVKAFNKIFKEYYHDIPSKYRK 262 >UniRef50_C7PJ33 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJ33_CHIPD Length = 285 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 104/275 (37%), Gaps = 13/275 (4%) Query: 23 NPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARA 82 + + + P F L V+ G + + G + I Sbjct: 5 HLYEPFEIAVSEPMDECPRPIHSHSFFELIYVVSGTGKHFVNESGLEYAPGNLFLIGPDD 64 Query: 83 ANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTS---LLHPARQIQLPSLQRGEGEAMLT- 138 + + LL + F +++G S R+ + Q L R EG+ ++ Sbjct: 65 THHFDIQEQTTLLFVRFNESYIGSSKVQERSRQSIAYILKNANHQPGCLLRYEGDQIVAK 124 Query: 139 ------ALTHLSRSPLEQNIIQPLV-LSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQ 191 H RS Q ++ + L+ + R++ + P I +VQ Sbjct: 125 SIMEAVMREHEERSFYHQELLLQFIDTVLMLIVRNITTLLPEKVNENTAEKALEILQYVQ 184 Query: 192 DNYA--QPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSI 249 N A + + +++++ F I+ ++L + F + EY+ ++ + L ++ + Sbjct: 185 TNIASPEKIRAKAISRQFGISEHYLGRYFKKQTNETLQEYIIHYKLRMVKSRLLHSNMRM 244 Query: 250 HEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 +E+A GF D + R+F++ G++P +Y + Q Sbjct: 245 NEIADGLGFTDKSHLNRLFKKHNGVSPAQYRKQQQ 279 >UniRef50_UPI000197C3B0 transcriptional regulator, AraC family protein n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C3B0 Length = 285 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 106/276 (38%), Gaps = 8/276 (2%) Query: 10 QQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQR 69 Q + S + P+ + + + +F IV G + Sbjct: 3 QSILSINSSDYFIRPENTVTI--EMRDSQEDFIVHSHNFNEFVIVFSGNGLHHWNGIDYP 60 Query: 70 LVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHP---ARQIQLP 126 + G++ +I A + + + L+++++ P + + L + +R +LP Sbjct: 61 ITCGDLFYINAEDCHGYHSVNNLKLVNVLYKPNEFFIKKSIEKYVPLSYQPITSRHWKLP 120 Query: 127 SLQRGEGEAMLTALTHLSRSPL--EQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYH 184 ++ + + P ++ + L L L + P + Sbjct: 121 PSSLSTLTPIIEKMALECQKPDIPSIHLCEGLFLQLAIYIYRL-RYQPDQAPISLLHQMD 179 Query: 185 SICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQK 244 + N + + + E AQ ++ L +LF M +EY++ +R+ +A ++L+ Sbjct: 180 QLINCLNLSINTSFSLEKFAQEHQMSARSLQRLFKSKTGMTVMEYLQQLRLCQAALLLRS 239 Query: 245 YHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 LSI EVA +CG+ DS+YF VF ++ +T Y Sbjct: 240 TSLSISEVAGQCGYEDSNYFSSVFHKKMKMTASAYR 275 >UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=Firmicutes RepID=B8DFE8_LISMH Length = 292 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 99/292 (33%), Gaps = 21/292 (7%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 ++ LN R + V + L+G + +L E Sbjct: 1 MSEYLEIPELNKAFPFRSFVNEGEVL--VYPHWHKEIEIIYALKGSLNLGVNDMPIQLKE 58 Query: 73 GEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLH------PARQIQLP 126 GE+ I + + + + + F + L + P Sbjct: 59 GEIQVINGGDVHYFLASPSSERVVIQFDLSLFQEEMQMDDQMQTLREMLTEMAHLSREWP 118 Query: 127 SLQRGEGEAMLTALTHLS--RSPLEQNIIQPLVLSLLHLCRSVVNMPPGN---------- 174 + ++++ + S P + I++ +L+++ L + Sbjct: 119 EETVAKMQSLIMNIHEESSGEKPGKHYILKADLLAIIGLIYREIPQIKTQPDSVISEEAV 178 Query: 175 -SQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWV 233 I ++V+ +Y +P++ + VA + + + +K F ++ M F+ ++ Sbjct: 179 LKSQETLHKLDQIFSYVEKHYQEPVSLQEVANYTGFSTYYFTKFFKRNTGMTFVTFLNDY 238 Query: 234 RMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 R+ KA+ +L + EVA+ GF F F+R G+ P +Y G Sbjct: 239 RLNKAKWMLLNEAFPVTEVAELAGFSSVKTFHHAFKRAMGVAPLKYRKTIYG 290 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 99/288 (34%), Gaps = 18/288 (6%) Query: 7 PADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVG---SLCIDFPRLDIVLRGEYGNLL 63 D++F G P ++ V GE + Sbjct: 11 LTDEEFMEIKQHGSSDYPFQ----YYYDNLELFDFHCIEWHWHREFEFLYVESGEVTCGI 66 Query: 64 EAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLG-------LSFYDSRTTSL 116 KQ L EGE +FI ++ + ++ + V P ++ + +S Sbjct: 67 GEKQIILSEGEAIFINSKILHRFYAPSGGIIPNFVCMPEFIAPENSLIYKKYILPIISSN 126 Query: 117 LHPARQIQLPSLQRGEGEAMLTALT----HLSRSPLEQNIIQPLVLSLLHLCRSVVNMPP 172 ++ R Q + M+ + R ++Q L L+ + Sbjct: 127 IYFQRFQTDELWQTKIIQTMIKIMEIQGNEKIRELATLALMQDLWLTFYENVKLSDKGDV 186 Query: 173 GNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRW 232 I ++ +NY L+ + +A I+ + LF + + Y+ Sbjct: 187 QTVDEVAQKRVQLIMQYIHENYNHNLSLDEIASHIGISKSTALNLFHRFLHTTPVNYLIG 246 Query: 233 VRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 R+ A +L+ + + +A GF + DYFCR+F++++ LTP EY Sbjct: 247 YRLQAASWLLKNTNKKVKTIAYESGFHNVDYFCRLFKKRYHLTPSEYR 294 >UniRef50_B5XY24 Transcriptional regulator, AraC family n=3 Tax=Klebsiella RepID=B5XY24_KLEP3 Length = 277 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 87/274 (31%), Positives = 138/274 (50%), Gaps = 14/274 (5%) Query: 13 FADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVE 72 D+ L+ L +V F S+P + + FPRL+IVL G+ L + L Sbjct: 5 LPDILHRLIGQKDHL-QVRFPEPDISVPALAFNVPFPRLEIVLEGQ----LNEQGLPLAA 59 Query: 73 G-----EMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPS 127 ++L++ A LP P LS++F LG S L + + Sbjct: 60 STLTTLQVLYVQAGKWTLPQWTGPATTLSILFGRQKLGFSIQRWDGKCL--HTEKQSVSR 117 Query: 128 LQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSIC 187 L G +L +L +S P + + +V +LL CR + R L+ ++ Sbjct: 118 LGPRVGSYLLLSLNEVSLQP-DPLTARLVVAALLSHCREQLVGLEMRV-SRSRDLFLAVQ 175 Query: 188 NWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHL 247 +++++N + PLTRESVA+ F+ITPN+LS +F + G++ F EY+ VR+ KA+ +L+ Y L Sbjct: 176 DYLEENLSLPLTRESVAKRFHITPNYLSHIFQKSGSVGFNEYLTRVRLEKAKQLLRGYDL 235 Query: 248 SIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSA 281 + E+A CGF DS+YFCRVF+R +P EY Sbjct: 236 KVKEIAHNCGFVDSNYFCRVFKRYTERSPSEYRR 269 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 109/294 (37%), Gaps = 19/294 (6%) Query: 8 ADQQFFADLFSGLV----LNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLL 63 A+ D + + + + V D ++ IV +G ++ Sbjct: 3 ANNVVLNDKLEDVSISKAYSFPFEVSFSEIRKLSKGYVKLHWHDEIQISIVTKGSVEFIV 62 Query: 64 EAKQQRLVEGEMLFIPARAANLPVN--NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPAR 121 K L G+ +FI + ++ + ++ + +++F L + + P Sbjct: 63 GEKSYILKNGQAIFINTQRIHMAKSVGDEDCIYHAIMFNAKLLKMFPGSIIEQKYIDPVI 122 Query: 122 QIQLPSLQRGEG-----EAMLTALTHLSRSPLEQNIIQPLVLSL--------LHLCRSVV 168 + G + L ++ + + Q+ L + + L L + Sbjct: 123 TSNKLNSIEIYGNNNWEQDALKYISDIINVDIIQDKGYELKIYIDLLNFWLLLVLNDKDI 182 Query: 169 NMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIE 228 +P + + +++ NY+ +T + +A ++ + F + M + Sbjct: 183 FNQKMEPKPINEQRIKDVLSFIHQNYSNKITLQDIADAVFVSKGECCRFFKKSLKMSPYD 242 Query: 229 YVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 Y+ R+ ++ +L+ LSI ++++ GF + ++ ++F+++ G TP EY Sbjct: 243 YLINYRINESMKLLKNSSLSILDISENVGFNNVSHYIQIFKKKTGQTPLEYRNS 296 >UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IHE3_CLOBU Length = 285 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 98/269 (36%), Gaps = 9/269 (3%) Query: 22 LNPQLLGRVWFASQPASLPVGSL---CIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFI 78 V+ + P S D + ++ G L+ K +L + + I Sbjct: 14 NRESRDLLVYQCGREECTPSHSFGPAIRDHFLIHYIIEGSGTFLVNGKLYKLHKNQGFII 73 Query: 79 PARAANLPVNNK--PVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 + P + + F G+ + L I S + E Sbjct: 74 FPDDITYYEADNHTPWIYKWVGFK----GIKAEYYLQCAGLTKENPIFEYSNDKFLEECF 129 Query: 137 LTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQ 196 + + +Q L+ L + ++ + D N+++ NY++ Sbjct: 130 DNMIKASKLKYASELKLQGLLSIFLSELIELSSIDSSSDYYYKDVYIKKCLNYIEMNYSR 189 Query: 197 PLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRC 256 L +A + + S +F + + +Y+ R+ KA +++ + LSI ++++ Sbjct: 190 KLLISEIAALLGLNTKYFSLIFKESIGVTPQQYIISFRVNKACELMKNFKLSICDISRSV 249 Query: 257 GFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 G+ DS F ++F++Q G++P +Y +F Sbjct: 250 GYDDSLAFSKIFKKQKGMSPKKYREQFIN 278 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 93/249 (37%), Gaps = 12/249 (4%) Query: 41 VGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFA 100 +G D L + RG + ++ G++ + + +++F Sbjct: 27 IGLHRHDCFELVFITRGTGLCRINDLSYPVLRGDVYILNPHDTHCYEMASSCTFYNILFR 86 Query: 101 PTWLG--------LSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNI 152 L L ++SRT L+ + + + E ++ L P + Sbjct: 87 RELLQHEPALTPLLDDWESRTDRKLYQLENDETDAEEFRFQEIIVELKKRL---PGYEAA 143 Query: 153 IQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPN 212 ++ L L + P + ++ + ++ +A ++ Sbjct: 144 VRALFAVFLVRLLR-RGNCERHIPPGHRPSASKVFEYINAHLGSTISLRELAGVAGMSTP 202 Query: 213 HLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQF 272 + F Q ++ +R+ +AR +L++ L+I E+A R GF D+ +F RVFR++ Sbjct: 203 AFAGAFRQWTGNSVPGHIGALRIRQARRLLEERKLTIGEIALRLGFYDTCHFSRVFRKKT 262 Query: 273 GLTPGEYSA 281 GL+P EY Sbjct: 263 GLSPREYRQ 271 >UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=B0P341_9CLOT Length = 282 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 104/266 (39%) Query: 20 LVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIP 79 + F + + + V +G G L ++ L G+ + + Sbjct: 10 MTNEDLPFKMFLFEGRDGNYIREKHWHRSIEIFAVFQGTLGFYLNDQEYLLECGDFIIVN 69 Query: 80 ARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTA 139 + + K M + L + + H + ++ M + Sbjct: 70 SNEVHSIHAPKENMTVVLQMPLNMFEKYYTGDQFICFAHAPQAQDEQLMEMICEMYMAYS 129 Query: 140 LTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLT 199 H Q++ ++ ++ R + P Q + I ++++++Y + L+ Sbjct: 130 DKHCGYDLKIQSLFYDMLYLMVTRYREINVHPDILHQHKQLTKLSVITDYMKEHYKEELS 189 Query: 200 RESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFP 259 +A+ F +P++LS++F ++ + + +Y++ +R L + ++I +++ GFP Sbjct: 190 LSKLAEIFGYSPSYLSRMFQKYAGINYKDYMQAIRTEHGYRQLVETDMTISDISMENGFP 249 Query: 260 DSDYFCRVFRRQFGLTPGEYSARFQG 285 ++ F + F +++G+ P E+ R + Sbjct: 250 NNKAFSKAFYKKYGIMPAEFRKRQKN 275 >UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CWX4_9VIBR Length = 316 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 104/273 (38%), Gaps = 11/273 (4%) Query: 18 SGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLF 77 + N + V+ A + +L+G + ++ + G M+F Sbjct: 23 EVVTFNRE-PVNVFAADVRQC---EAHWHAAAEFICILKGSFAIGVDGNSKTYHSGGMVF 78 Query: 78 IPARAANLPVN-NKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAM 136 + + + LL++ F+P D + R +AM Sbjct: 79 LAPNKIHSLQSKTANSRLLTVQFSPLLFQQLTGDVSFNYGVKSFEHQ--SEKDRSVWDAM 136 Query: 137 LTALTHLSRSP----LEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQD 192 L + + +L+ + V+N+ + + D L + ++ Sbjct: 137 LDLASEYVTDLDTISFSHMSLIYRLLANIERVSEVINLTQNSVRDNDDELIKTCLTYIDS 196 Query: 193 NYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEV 252 +Y +PLT +A+ ++ +++S++F + F +Y+ ++R++KA +L I ++ Sbjct: 197 HYMEPLTLTDIAERSGLSYHYVSRMFKRVCGFNFKDYLTFIRVSKALPLLCDTTFPITDI 256 Query: 253 AQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG 285 A +CGF + FR+ + TP + ++ G Sbjct: 257 AHKCGFSEHKLLIAAFRKYYDQTPTAFRKKYNG 289 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 117/283 (41%), Gaps = 14/283 (4%) Query: 6 LPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEA 65 L ++ +F ++ L + L ++ + + ++ GE ++ Sbjct: 3 LNSNYEFLNEMLQHLQV---HLEEAYYTQCSPQWRELDYIPSYNKFYLICEGEGWLNIDG 59 Query: 66 KQQRLVEGEMLFIPARAANLP--VNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQI 123 + R V G+++ +PA V+++P F T + + + + Sbjct: 60 QDYRPVPGQLVHMPAHVLQSYSAVSDRPYSKYWCHFTATMGEMDLFQWLEIPPI-----L 114 Query: 124 QLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL----LHLCRSVVNMPPGNSQPRG 179 + + L L ++ I+ + L L L S ++ + Sbjct: 115 DISPDHTDSLTKLFRELVELYQNRSYLARIREKAILLEIIALFLSHSDTHLKFVPGRLGE 174 Query: 180 DFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKAR 239 I +++ N ++ LT E +A+ ++ PN+L + F +H + ++Y+ RM KA+ Sbjct: 175 IERLKQIEAFIEANLSEALTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAK 234 Query: 240 MILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSAR 282 +L L+I E+A+ GFPD+++F + FR++ +P EY R Sbjct: 235 SLLGTTDLAIKEIAELVGFPDTNHFAKAFRKEASCSPTEYRHR 277 >UniRef50_B4D507 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D507_9BACT Length = 288 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 100/267 (37%), Gaps = 18/267 (6%) Query: 35 QPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNN----- 89 + +L +V++G ++ L GE+ + + Sbjct: 22 RGPDYKCTWHFHPEYQLGMVVKGSGHRIVGDNIGPLEAGEISLLGPNLPHAWQFEDAPRG 81 Query: 90 --KPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQ-----IQLPSLQRGEGEAMLTALTH 142 K + + + F +LG F+ +H + +Q+ R A++ AL Sbjct: 82 QRKELHGIIIYFREDFLGADFFQRPEAERIHRLLKRAAVGLQVRGKTRRTAAALMQALPR 141 Query: 143 LSRSPLEQNIIQPLVLSLLHLCRSVVNMPPG----NSQPRGDFLYHSICNWVQDNYAQPL 198 R + + +L LL +V + + +C +Q A+PL Sbjct: 142 --RQGFARVLDLLQLLDLLAGSEELVPICSAGFLPQLPDQHGERLRRVCELIQQRIAEPL 199 Query: 199 TRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGF 258 R+ +A+ + +P S+ F F E+V +R+ +A +L + L+I E+A CGF Sbjct: 200 NRDEIARLAHFSPGAFSRFFKARTGKTFHEFVNELRIGRACRLLAEQELNITEIALGCGF 259 Query: 259 PDSDYFCRVFRRQFGLTPGEYSARFQG 285 + F R FRR P ++ + Q Sbjct: 260 ANVASFSRSFRRAKRCNPTQFRRKLQS 286 >UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QN46_9SPHI Length = 288 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 103/270 (38%), Gaps = 22/270 (8%) Query: 34 SQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPV- 92 +L ++ +GE ++ K R ++L + A ++ ++ Sbjct: 21 DNAPYFYGQLHFHPEIQLTLIQQGEGTLIVGDKIDRFNPYDVLLLGANLPHVLRSDTDYY 80 Query: 93 --------MLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLS 144 +S++F P L + + T L Q ++ G ALT L Sbjct: 81 QPESTRRATSVSVLFKPEHLEKTMLNLPETRHLTTLLQEAQHGVRLRCGTE--NALTQLL 138 Query: 145 RSPLEQNIIQPLVLSLLHLCRSVVNMPPGN----------SQPRGDFLYHSICNWVQDNY 194 E+ + L+ LL + ++ P +P + +++ Y Sbjct: 139 EDIPEKRPFEQLL-GLLQVLDNLAANPEREVLSATAYAQPQRPDDQRRLEQVFSYILQRY 197 Query: 195 AQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQ 254 A P++ + VA N+TP + F QH F + + VR+ A L++ +I ++A Sbjct: 198 ASPISLDDVANVANLTPGAFCRFFRQHTRKTFSQLLNEVRIEHACRYLRESQENISQIAL 257 Query: 255 RCGFPDSDYFCRVFRRQFGLTPGEYSARFQ 284 CG+ + F R F+ G+ PGEY ++ Sbjct: 258 NCGYTNLSNFNRQFKEIVGMPPGEYIRSYR 287 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 21/260 (8%) Query: 43 SLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLP-VNNKPVMLLSLVFAP 101 DF L V +G N+++A + L +G++ + A A + K + +++ P Sbjct: 76 PHKHDFFELIYVYQGSVINVVDAHEVVLQQGDLCIMNASAVHTLGKLGKQDTVYNILIKP 135 Query: 102 TWLG------------------LSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHL 143 S Y + PS L H Sbjct: 136 ELFNQAFLGLIAENEIISSFFLNSIYQKSISRNFMTFHTQDFPSDDAETYVHRLIMENHF 195 Query: 144 SRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPR-GDFLYHSICNWVQDNYAQPLTRES 202 ++I LV + L R + NS G I ++ D+Y + ++ + Sbjct: 196 KDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSIELGMSNVSQIIAYISDHY-KDISIKQ 254 Query: 203 VAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSD 262 VA F+ PN+LS L ++ F E ++ +R A+ LQK + I+E+ G+ + Sbjct: 255 VADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTAAKEYLQKLDIPINEIVYMVGYTNKS 314 Query: 263 YFCRVFRRQFGLTPGEYSAR 282 +F R F+++ G+TP +Y + Sbjct: 315 HFYRTFKQEMGITPAQYRKQ 334 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 101/233 (43%), Gaps = 4/233 (1%) Query: 48 FPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLS 107 F + VL GE ++ L +G+ I ++++ + F + G Sbjct: 40 FYLIHFVLEGEGDFYVKGAHYHLKKGQGFLIEPDTPATYISDEHHPWRYVWFG--FSGRC 97 Query: 108 FYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSV 167 +D+ ++ L + I + + L H + + + ++ L + + Sbjct: 98 AHDTLSSIGLTQNQPIFTCEDGDKLKKYVFDMLAHNTSGHADHYRLMGMLYLALSVIANA 157 Query: 168 VNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFI 227 P G+ + +++Q++Y+ P+ E ++ + I ++ S LF Q+ M + Sbjct: 158 QKDKLE--APSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSYFSDLFKQYTGMSPV 215 Query: 228 EYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYS 280 +Y++ R+ KA+ +L LS+ +A CG+ ++ F ++FR+ GL+P Y Sbjct: 216 KYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTGLSPNAYR 268 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.161 0.491 Lambda K H 0.267 0.0493 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,998,884,772 Number of Sequences: 3077464 Number of extensions: 113648913 Number of successful extensions: 439177 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 19640 Number of HSP's successfully gapped in prelim test: 2756 Number of HSP's that attempted gapping in prelim test: 382485 Number of HSP's gapped (non-prelim): 28641 length of query: 285 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 158 effective length of database: 649,558,428 effective search space: 102630231624 effective search space used: 102630231624 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.6 bits) S2: 93 (40.2 bits)