18/01/2012 06:07:53 : INFO  : Run start: Wed Jan 18 06:07:51 GMT 2012
18/01/2012 06:07:59 : INFO  : Initialised job
18/01/2012 06:08:02 : INFO  : Renaming log file 'phyre2_20120118_060751.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/a51a4178f006ed36/phyre_20120118_060751.log'
18/01/2012 06:08:03 : INFO  : Initialised job:
Sequence
>batch____
MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHT
NDKYIWDYVNDLVEFNRFTNSPLAIYKDKLFNLPFNMNTFHQMWGVKDPQEAQNIINAQK
KKYGDKVPENLEEQAISLVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNN
YFSDRYQGIPVGGYTKLIEKMLEGVDVKLGIDFLKDKDSLASKAHRIIYTGPIDQYFDYR
FGALEYRSLKFETERHEFPNFQGNAVINFTDANVPYTRIIEHKHFDYVETKHTVVTKEYP
LEWKVGDEPYYPVNDNKNMELFKKYRELASREDKVIFGGRLAEYKYYDMHQVISAALYQV
KNIMSTD

18/01/2012 06:08:04 : INFO  : Checked sequence
18/01/2012 06:08:08 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 06:08:10 : INFO  : PSI-BLAST 3 iterations
18/01/2012 06:10:08 : INFO  : PSI-BLAST 5 iterations
18/01/2012 06:12:42 : INFO  : Finished PSI-BLAST
18/01/2012 06:12:44 : INFO  : Running Buildali to generate a3m file
18/01/2012 06:22:39 : INFO  : Converting to HMM
18/01/2012 06:22:43 : INFO  : Calibrating HMM
18/01/2012 06:23:04 : INFO  : Searching HMM database
18/01/2012 06:29:40 : INFO  : Finished buildali
18/01/2012 06:29:42 : INFO  : Predicting secondary structure
18/01/2012 06:29:51 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 06:29:53 : INFO  : Predicting Disordered regions
18/01/2012 06:29:58 : INFO  : Predicted Disorder (Disopred)
18/01/2012 06:29:59 : INFO  : Running memsat_svm check
18/01/2012 06:37:04 : INFO  : Globular protein
18/01/2012 06:37:06 : INFO  : Predicted Transmembrane (memsat_svm) ID 'a51a4178f006ed36'
18/01/2012 06:37:07 : INFO  : Initialising fold library search
18/01/2012 06:37:11 : INFO  : Initialised search input
18/01/2012 06:37:13 : INFO  : Building Ensemble models
18/01/2012 06:37:16 : INFO  : Building hh.c1i8tB_.model.1.pdb
18/01/2012 06:37:29 : INFO  : Building c1i8tB_.1.pdb
18/01/2012 06:37:43 : INFO  : Building c1v0jB_.2.pdb
18/01/2012 06:37:57 : INFO  : Building c2bi8A_.3.pdb
18/01/2012 06:38:11 : INFO  : Building c3hdqI_.4.pdb
18/01/2012 06:38:27 : INFO  : Building d1i8ta1.5.pdb
18/01/2012 06:38:45 : INFO  : Building d2bi7a1.6.pdb
18/01/2012 06:39:03 : INFO  : Building c2ivdA_.7.pdb
18/01/2012 06:39:18 : INFO  : Building c1s3bB_.8.pdb
18/01/2012 06:39:31 : INFO  : Building c3lovA_.9.pdb
18/01/2012 06:39:45 : INFO  : Building c3nksA_.10.pdb
18/01/2012 06:40:02 : INFO  : Building c1sezA_.11.pdb
18/01/2012 06:40:22 : INFO  : Building c3k7tB_.12.pdb
18/01/2012 06:40:40 : INFO  : Building c3i6dA_.13.pdb
18/01/2012 06:40:57 : INFO  : Building c2hkoA_.14.pdb
18/01/2012 06:41:13 : INFO  : Building c2vvlD_.15.pdb
18/01/2012 06:41:30 : INFO  : Building c2v1dA_.16.pdb
18/01/2012 06:41:45 : INFO  : Building c2xagA_.17.pdb
18/01/2012 06:42:01 : INFO  : Building c1f8sA_.18.pdb
18/01/2012 06:42:16 : INFO  : Building c3rhaA_.19.pdb
18/01/2012 06:42:30 : INFO  : Building c2yg4B_.20.pdb
18/01/2012 06:43:01 : INFO  : Finished HH model building
18/01/2012 06:43:02 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 06:43:54 : INFO  : html domain output complete ID 'a51a4178f006ed36'
18/01/2012 08:45:17 : INFO  : Run end  : Wed Jan 18 08:45:16 GMT 2012
