BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (412 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P34749 Protein transport protein hofQ n=114 Tax=Enterob... 823 0.0 UniRef50_C8QE32 Type IV pilus secretin PilQ n=1 Tax=Pantoea sp. ... 373 e-102 UniRef50_B2K5T6 Type IV pilus secretin PilQ n=46 Tax=Enterobacte... 340 7e-92 UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas... 289 2e-76 UniRef50_D0ZFZ5 Type II secretory pathway, component HofQ n=2 Ta... 285 2e-75 UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae Re... 276 1e-72 UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteo... 274 5e-72 UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vi... 271 4e-71 UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gamm... 270 7e-71 UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Pr... 268 3e-70 UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella ... 266 9e-70 UniRef50_Q7NA54 Similarities with protein transport protein HofQ... 265 2e-69 UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella ko... 259 2e-67 UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Ta... 253 1e-65 UniRef50_B1J2J3 Type IV pilus secretin PilQ n=5 Tax=Pseudomonas ... 251 3e-65 UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative ... 249 1e-64 UniRef50_Q1YS04 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=... 248 2e-64 UniRef50_D2U379 Protein transport protein HofQ n=1 Tax=Arsenopho... 247 7e-64 UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae Rep... 243 1e-62 UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnic... 236 1e-60 UniRef50_Q1Q8Q7 Type II and III secretion system protein n=5 Tax... 235 2e-60 UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax... 234 3e-60 UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteob... 231 3e-59 UniRef50_Q21H82 Type II and III secretion system protein n=11 Ta... 229 1e-58 UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Ta... 229 1e-58 UniRef50_B8GPV1 Type IV pilus secretin PilQ n=5 Tax=Chromatiales... 229 2e-58 UniRef50_A6GPK2 Pili assembly protein PilQ n=1 Tax=Limnobacter s... 229 2e-58 UniRef50_Q0VMB7 Fimbrial assembly protein pilQ n=3 Tax=Gammaprot... 227 5e-58 UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter Re... 226 1e-57 UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisser... 225 3e-57 UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas in... 224 5e-57 UniRef50_C2LEH3 Competence protein E n=3 Tax=Proteus RepID=C2LEH... 223 1e-56 UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=A... 223 1e-56 UniRef50_Q7MH82 Type IV pilus (Tfp) assembly protein PilQ n=9 Ta... 223 1e-56 UniRef50_Q60BY4 Fimbrial assembly protein PilQ n=1 Tax=Methyloco... 222 2e-56 UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legi... 222 2e-56 UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax... 221 3e-56 UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=... 221 5e-56 UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobaci... 220 7e-56 UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammapro... 219 2e-55 UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadace... 217 8e-55 UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter Re... 217 8e-55 UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein ... 217 8e-55 UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderi... 216 1e-54 UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromati... 215 2e-54 UniRef50_UPI0001C34749 hypothetical protein PretD1_16510 n=1 Tax... 214 6e-54 UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 213 9e-54 UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 212 2e-53 UniRef50_A5WCG3 Type IV pilus secretin PilQ n=2 Tax=Bacteria Rep... 211 3e-53 UniRef50_Q39X07 Type II and III secretion system protein:NolW-li... 211 5e-53 UniRef50_Q0AF45 Type IV pilus secretin PilQ n=3 Tax=Nitrosomonas... 210 9e-53 UniRef50_D0SET7 Type IV pilus biogenesis and competence protein ... 209 1e-52 UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 T... 209 2e-52 UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fast... 208 4e-52 UniRef50_D1P0E2 Protein transport protein HofQ n=3 Tax=Providenc... 207 6e-52 UniRef50_A9GGP4 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 207 6e-52 UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lo... 207 6e-52 UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans... 206 1e-51 UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Bu... 206 2e-51 UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular or... 204 6e-51 UniRef50_A7BUG3 Bacterial type II and III secretion system prote... 204 6e-51 UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax... 204 6e-51 UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=ce... 203 8e-51 UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter... 202 1e-50 UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxoba... 202 2e-50 UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein ... 200 8e-50 UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobac... 199 1e-49 UniRef50_Q1K2X4 Type II and III secretion system protein n=1 Tax... 199 2e-49 UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Bur... 196 1e-48 UniRef50_Q5P5P1 Fimbrial type-IV assembly protein PilQ n=4 Tax=B... 194 7e-48 UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 193 8e-48 UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragme... 192 2e-47 UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS 192 3e-47 UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD 190 7e-47 UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis... 189 2e-46 UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadac... 187 6e-46 UniRef50_A8PP54 Putative fimbrial assembly protein PilQ n=1 Tax=... 183 1e-44 UniRef50_Q0EXA5 Probable pilQ; fimbrial type-4 assembly signal p... 181 6e-44 UniRef50_C7LN99 Type IV pilus secretin PilQ n=1 Tax=Desulfomicro... 178 3e-43 UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thio... 177 5e-43 UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter p... 177 6e-43 UniRef50_B5YJ50 PilQ n=1 Tax=Thermodesulfovibrio yellowstonii DS... 174 5e-42 UniRef50_Q1IRM5 Type II and III secretion system protein n=1 Tax... 173 9e-42 UniRef50_Q6MPI6 Fimbrial assembly protein n=1 Tax=Bdellovibrio b... 171 4e-41 UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax... 171 4e-41 UniRef50_C0QLC9 PilQ n=1 Tax=Desulfobacterium autotrophicum HRM2... 167 5e-40 UniRef50_D0LHN1 Type IV pilus secretin PilQ n=1 Tax=Haliangium o... 167 7e-40 UniRef50_A6W2T5 Type II and III secretion system protein n=1 Tax... 167 7e-40 UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax... 167 7e-40 UniRef50_P03668 Putative assembly protein ORF430 n=1 Tax=Pseudom... 167 8e-40 UniRef50_A3YI86 Type IV pili biogenesis protein PilQ n=1 Tax=Mar... 166 1e-39 UniRef50_A1WZA7 Type II and III secretion system protein n=1 Tax... 165 3e-39 UniRef50_B8DPS5 Type II and III secretion system protein n=4 Tax... 164 4e-39 UniRef50_C8X4Y6 Type IV pilus secretin PilQ n=1 Tax=Desulfohalob... 164 7e-39 UniRef50_B6J4A2 Type 4 pili secretin (Outer membrane porin) n=5 ... 162 2e-38 UniRef50_B3TCB2 Putative bacterial type II and III secretion sys... 160 8e-38 UniRef50_A8ZSX5 Type IV pilus secretin PilQ n=1 Tax=Desulfococcu... 160 9e-38 UniRef50_Q2LWT2 Type IV secretion n=1 Tax=Syntrophus aciditrophi... 155 3e-36 UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax... 155 3e-36 UniRef50_A0LFN7 Type IV pilus secretin PilQ n=1 Tax=Syntrophobac... 154 5e-36 UniRef50_C9RKD2 Type II and III secretion system protein n=1 Tax... 154 6e-36 UniRef50_C0GNC2 Type IV pilus secretin PilQ n=1 Tax=Desulfonatro... 152 2e-35 UniRef50_B8FHA0 Type IV pilus secretin PilQ n=1 Tax=Desulfatibac... 152 3e-35 UniRef50_Q47JK8 Type II and III secretion system protein:NolW-li... 150 7e-35 UniRef50_C8X4Q5 Type II and III secretion system protein n=1 Tax... 149 2e-34 UniRef50_D2RIL0 Type II and III secretion system protein n=2 Tax... 145 3e-33 UniRef50_A1HM79 Type II and III secretion system protein n=1 Tax... 144 6e-33 UniRef50_B6BQP5 Type II Secretion PilQ n=2 Tax=root RepID=B6BQP5... 138 3e-31 UniRef50_B1XUD4 Type II and III secretion system protein n=1 Tax... 133 1e-29 UniRef50_A4SUZ8 Type II and III secretion system protein n=2 Tax... 132 3e-29 UniRef50_C1ZJR8 Type II secretory pathway, component PulD n=1 Ta... 125 2e-27 UniRef50_A8UYL2 Putative uncharacterized protein n=1 Tax=Hydroge... 125 4e-27 UniRef50_B5YDZ7 Bacterial type II and III secretion system prote... 120 9e-26 UniRef50_B8E238 Type II and III secretion system protein n=1 Tax... 117 5e-25 UniRef50_C6WVN7 Type II and III secretion system protein n=1 Tax... 117 7e-25 UniRef50_C9LMV3 Bacterial type II and III secretion system prote... 117 8e-25 UniRef50_C1TME7 Type II secretory pathway, component HofQ n=1 Ta... 117 1e-24 UniRef50_D2QZA3 Type II and III secretion system protein n=1 Tax... 115 2e-24 UniRef50_B6QWW0 General (Type II) secretion pathway (GSP) D prot... 115 3e-24 UniRef50_O67320 General secretion pathway protein D n=1 Tax=Aqui... 115 3e-24 UniRef50_C0QUI7 Fimbrial assembly protein PilQ n=1 Tax=Persephon... 115 4e-24 UniRef50_B5JQS4 Bacterial type II and III secretion system prote... 114 6e-24 UniRef50_A8EVV0 General secretion pathway protein D n=1 Tax=Arco... 113 1e-23 UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desu... 113 2e-23 UniRef50_B4D9V8 Type II and III secretion system protein n=1 Tax... 112 2e-23 UniRef50_A8URL9 Putative type II secretion system protein n=1 Ta... 112 3e-23 UniRef50_C1DU75 PilQ n=3 Tax=Sulfurihydrogenibium RepID=C1DU75_S... 112 3e-23 UniRef50_C9RLY9 Type II and III secretion system protein n=1 Tax... 111 5e-23 UniRef50_Q7UHD1 General secretion pathway protein D (OutD) n=1 T... 111 5e-23 UniRef50_A6C2R4 Type IV pilin multimeric outer membrane protein ... 110 8e-23 UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gam... 110 1e-22 UniRef50_Q2JVP0 Putative type IV pilus secretin PilQ n=1 Tax=Syn... 109 2e-22 UniRef50_C6P0F2 Type II and III secretion system protein n=1 Tax... 109 2e-22 UniRef50_Q1H1N3 Type II and III secretion system protein n=2 Tax... 109 2e-22 UniRef50_B5S3N0 Gspd-related protein n=4 Tax=Ralstonia solanacea... 108 5e-22 UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax... 108 5e-22 UniRef50_B9XBV8 Type II and III secretion system protein n=1 Tax... 107 6e-22 UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Coma... 107 7e-22 UniRef50_Q1V0G7 Type II Secretion PilQ n=2 Tax=Candidatus Pelagi... 107 8e-22 UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Mari... 107 1e-21 UniRef50_C9LRH4 Putative secretin and TonB short domain protein ... 106 2e-21 UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiob... 106 2e-21 UniRef50_B9K747 ComE protein n=6 Tax=Thermotogaceae RepID=B9K747... 106 2e-21 UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n... 105 3e-21 UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gamm... 105 3e-21 UniRef50_Q5P7D0 General (Type II) secretion pathway (GSP) D prot... 105 3e-21 UniRef50_B1Y6L5 Type II and III secretion system protein n=1 Tax... 105 4e-21 UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Synt... 104 5e-21 UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acineto... 104 6e-21 UniRef50_D0X4T6 Putative uncharacterized protein n=1 Tax=Vibrio ... 103 2e-20 UniRef50_D1B5I4 Type II and III secretion system protein n=1 Tax... 102 2e-20 UniRef50_Q2SVR9 Type II/III secretion system protein n=36 Tax=Bu... 102 2e-20 UniRef50_UPI0001745622 probable general secretion pathway protei... 102 2e-20 UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desu... 102 2e-20 UniRef50_C0AE82 Type II secretory pathway component PulD-like pr... 102 2e-20 UniRef50_Q7UGK0 Putative outer membrane channel for pilus assemb... 102 3e-20 UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citroba... 102 3e-20 UniRef50_A3ZUT9 Type IV pilin multimeric outer membrane protein ... 102 3e-20 UniRef50_C6CGU4 Type III secretion outer membrane pore, YscC/Hrc... 102 3e-20 UniRef50_Q1LH50 Type II and III secretion system protein n=19 Ta... 102 3e-20 UniRef50_C9M548 Putative bacterial type II/III secretion system ... 102 3e-20 UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Coma... 102 3e-20 UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax... 101 4e-20 UniRef50_A8UQX4 General secretion pathway protein D n=1 Tax=Hydr... 101 5e-20 UniRef50_C5CK05 Type II and III secretion system protein n=1 Tax... 100 7e-20 UniRef50_B4U6K2 General secretion pathway protein D n=1 Tax=Hydr... 100 7e-20 UniRef50_D2RKE8 Type II and III secretion system protein n=1 Tax... 100 8e-20 UniRef50_C9NP33 Type III secretion system outer membrane pore Ys... 100 1e-19 UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-li... 100 1e-19 UniRef50_Q7NRG7 Probable type II secretion system protein n=1 Ta... 100 2e-19 UniRef50_B0VJ43 Putative uncharacterized protein n=1 Tax=Candida... 99 2e-19 UniRef50_A9IKI2 Putative outer membrane protein n=4 Tax=Bordetel... 99 2e-19 UniRef50_D0IVZ6 Type II and III secretion system protein n=2 Tax... 99 2e-19 UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gamm... 99 2e-19 UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desu... 99 3e-19 UniRef50_A4SKW4 S-protein secretion component D n=2 Tax=Gammapro... 99 3e-19 UniRef50_D1ULF2 Type II and III secretion system protein n=1 Tax... 99 3e-19 UniRef50_C4V5Y4 Fimbrial type IV assembly protein pilQ n=1 Tax=S... 99 3e-19 UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Side... 98 5e-19 UniRef50_A8FVV7 Flp pilus assembly protein, secretin CpaC n=6 Ta... 98 5e-19 UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyph... 98 6e-19 UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Arom... 98 7e-19 UniRef50_B8IDY5 Type II and III secretion system protein n=1 Tax... 97 1e-18 UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Pro... 97 1e-18 UniRef50_B9Z6A5 Type II and III secretion system protein n=1 Tax... 97 1e-18 UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhiz... 97 1e-18 UniRef50_B5EAZ0 Type II and III secretion system protein n=1 Tax... 97 1e-18 UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamm... 97 1e-18 UniRef50_Q0BFS7 Type II and III secretion system protein n=7 Tax... 97 1e-18 UniRef50_P55702 Uncharacterized protein y4xJ n=5 Tax=Rhizobiales... 96 2e-18 UniRef50_P31701 General secretion pathway protein D n=27 Tax=Ent... 96 2e-18 UniRef50_D2L5I8 Type II and III secretion system protein n=1 Tax... 96 2e-18 UniRef50_Q07N78 General secretion pathway protein D n=1 Tax=Rhod... 96 2e-18 UniRef50_Q48IR4 Type III secretion component, putative n=3 Tax=P... 96 2e-18 UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax... 96 3e-18 UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified... 96 3e-18 UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Bur... 96 3e-18 UniRef50_C0QPL4 General secretion pathway protein D n=1 Tax=Pers... 96 3e-18 UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Synt... 96 4e-18 UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseu... 96 4e-18 UniRef50_C3KN98 Type II and III secretion system protein RhcC2 n... 95 4e-18 UniRef50_C8SRS2 Type II and III secretion system protein n=2 Tax... 95 5e-18 UniRef50_B1Y7C9 Type II and III secretion system protein n=1 Tax... 95 5e-18 UniRef50_B5EGL2 Type II and III secretion system protein n=3 Tax... 95 5e-18 UniRef50_Q7MK00 Flp pilus assembly protein, secretin CpaC n=2 Ta... 95 6e-18 UniRef50_C0QK68 GspD2 n=1 Tax=Desulfobacterium autotrophicum HRM... 94 6e-18 UniRef50_C9KL82 Putative type IV pili biogenesis protein PilQ n=... 94 6e-18 UniRef50_C1A7C5 Putative general secretion pathway protein D n=1... 94 6e-18 UniRef50_A1ASI5 Type II and III secretion system protein n=1 Tax... 94 7e-18 UniRef50_A3UH04 General (Type II) secretion pathway (GSP) D prot... 94 8e-18 UniRef50_B1JDL3 General secretion pathway protein D n=6 Tax=Pseu... 94 8e-18 UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyph... 94 1e-17 UniRef50_Q1LE58 Type II and III secretion system protein n=6 Tax... 94 1e-17 UniRef50_C1DRT4 General secretion pathway protein D n=2 Tax=Gamm... 94 1e-17 UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D prot... 94 1e-17 UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobiu... 94 1e-17 UniRef50_B9XM19 Type II and III secretion system protein n=1 Tax... 94 1e-17 UniRef50_B4R9H7 Flp pilus assembly protein, secretin CpaC n=1 Ta... 94 1e-17 UniRef50_A9HHL5 Type II and III secretion system protein n=1 Tax... 94 1e-17 UniRef50_A1WFQ3 General secretion pathway protein D n=1 Tax=Verm... 93 2e-17 UniRef50_P03667 Virion export protein n=4 Tax=root RepID=G4P_BPIKE 93 2e-17 UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Meth... 93 2e-17 UniRef50_C4KA69 Type II and III secretion system protein n=1 Tax... 93 2e-17 UniRef50_C6QEC9 Type II and III secretion system protein n=1 Tax... 92 2e-17 UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 T... 92 3e-17 UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphi... 92 3e-17 UniRef50_C5SJV9 Type II and III secretion system protein n=1 Tax... 92 3e-17 UniRef50_Q5SII6 General secretion pathway protein (PilQ) n=5 Tax... 92 3e-17 UniRef50_A1WEI0 Type II and III secretion system protein n=1 Tax... 92 3e-17 UniRef50_A8FXQ1 Type II secretory pathway component PulD-like pr... 92 3e-17 UniRef50_Q0C324 Type II/III secretion system protein n=1 Tax=Hyp... 92 4e-17 UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Mari... 92 4e-17 UniRef50_A3QAL9 Type II and III secretion system protein n=3 Tax... 92 5e-17 UniRef50_A4A2S6 Putative outer membrane channel for pilus assemb... 92 5e-17 UniRef50_Q2KYI4 Putative pilus assembly protein n=1 Tax=Bordetel... 92 5e-17 UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burk... 92 5e-17 UniRef50_Q1GYK8 Type II and III secretion system protein n=1 Tax... 91 5e-17 UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pse... 91 6e-17 UniRef50_A9BV48 Type II and III secretion system protein n=3 Tax... 91 6e-17 UniRef50_D0XKD9 General secretion pathway protein D n=1 Tax=Brev... 91 6e-17 UniRef50_A1HPR1 Type II and III secretion system protein n=1 Tax... 91 6e-17 UniRef50_C9KLT4 Putative type II/III secretion system protein n=... 91 6e-17 UniRef50_C8PXJ4 General secretion pathway protein D n=1 Tax=Enhy... 91 6e-17 UniRef50_A5FVS3 Type II and III secretion system protein n=1 Tax... 91 7e-17 UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cell... 91 8e-17 UniRef50_C4XKD6 Bacterial type II and III secretion system prote... 91 9e-17 UniRef50_A0LPH6 General secretion pathway protein D n=1 Tax=Synt... 91 9e-17 UniRef50_Q52498 Hypersensitivity response secretion protein hrpA... 91 9e-17 UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax... 91 9e-17 UniRef50_Q6AN10 Putative uncharacterized protein n=1 Tax=Desulfo... 91 9e-17 >UniRef50_P34749 Protein transport protein hofQ n=114 Tax=Enterobacteriaceae RepID=HOFQ_ECOLI Length = 412 Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/412 (100%), Positives = 412/412 (100%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL Sbjct: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR Sbjct: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 Query: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ Sbjct: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN Sbjct: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA Sbjct: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL Sbjct: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE Sbjct: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 >UniRef50_C8QE32 Type IV pilus secretin PilQ n=1 Tax=Pantoea sp. At-9b RepID=C8QE32_9ENTR Length = 421 Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust. Identities = 201/412 (48%), Positives = 279/412 (67%), Gaps = 5/412 (1%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MK W+ LL + + A Q+++L+ DD PV +LQALA+ ++ NL+++P V G +SL Sbjct: 4 MKVWL--LLFLGLSAPLHASEQRLSLVFDDTPVENILQALADYQQTNLLIAPGVEGRLSL 61 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 L D+ W++AL V + A L QE +L ++ +WQ + +AE+ Q + L + Sbjct: 62 RLEDIEWQRALALVARLARLSVVQEEGVLLIYPESWQQWQAQKIQAEREEQQQQIALTQQ 121 Query: 121 SITLQYADAGELAK---AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 ++T YA+AG+ A+ A L++ +GS+TVD RTN LLLRD AL +W+ +DLP Sbjct: 122 TVTFHYANAGDAARSLQAERSLMTPRGSVTVDSRTNSLLLRDTPRALQETVRWLNALDLP 181 Query: 178 VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIG 237 + QVELSAHIVTI+E+ LRELGV W L+ A+ + L L+V+ +G +G Sbjct: 182 LEQVELSAHIVTISEEHLRELGVNWGLSPAEEVMQTLRNPQLAIPLAVSNPAFRMGVTLG 241 Query: 238 RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 I G LL+LELSALEQ+ Q+DIIASPRL SH Q A+IKQG+EIPY+V SG SGAT++EF Sbjct: 242 HIGGDLLNLELSALEQESQIDIIASPRLFTSHQQTATIKQGTEIPYEVKSGNSGATAIEF 301 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 KEAVLGMEVTP VL GRI+LKL +SQN+PG+ + + + L+IDKQEI+TQV ++ GET Sbjct: 302 KEAVLGMEVTPVVLGNGRIQLKLRLSQNMPGRSINTGEHQTLSIDKQEIDTQVTLRDGET 361 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 LALGGIF ++ ++ VP LG +P G LFRH E +++ELV+FITPRLV Sbjct: 362 LALGGIFQQQRAQNENRVPWLGKLPVVGNLFRHQTDEHKKKELVIFITPRLV 413 >UniRef50_B2K5T6 Type IV pilus secretin PilQ n=46 Tax=Enterobacteriaceae RepID=B2K5T6_YERPB Length = 500 Score = 340 bits (871), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 193/405 (47%), Positives = 273/405 (67%), Gaps = 15/405 (3%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 +P ++ P VTL D PV+ +LQALA+ +LNL+ + V G +SL L +VPW+QAL Sbjct: 105 LPRTRSGGP--VTLEFQDAPVSVILQALADYRQLNLITTTGVGGNLSLRLIEVPWEQALA 162 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP--LENRSITLQYADAG 130 +++ L +EG ++ V + I QE +Q Q P L N ++ LQYA+A Sbjct: 163 IILRMGRLKAEREGTVMMVFT----EQEI--QERQQRTKQQAAPEALANLTLALQYANAE 216 Query: 131 ELAKAGEKL----LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 ++A + + L LS GS+ DKRTN LL+RD +L+ L+ W+ +MDLP+ QV+LSAH Sbjct: 217 QVADSLDPLQGGLLSPLGSVVADKRTNTLLIRDTPASLALLKNWLIEMDLPLQQVQLSAH 276 Query: 187 IVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDL 246 IVTI+ + L+ELGV+W + + + + ++ +L + + VGF++ RI GRLL+L Sbjct: 277 IVTISSEDLQELGVRWGMGEGKGNTAL-RINDFNVNLPLPNSAASVGFHVARIGGRLLEL 335 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEV 306 ELSALEQ+ Q+DIIASPRL+ SH Q ASIKQGS+IPY VS G+ A ++EFKEAVLGMEV Sbjct: 336 ELSALEQENQVDIIASPRLITSHQQTASIKQGSDIPYTVSRGKKEAAAIEFKEAVLGMEV 395 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 TP +L+ G+I L L ISQN+PG +++ + E+L IDKQEI+TQV V GET+ LGGIF + Sbjct: 396 TPKILRNGKIILDLKISQNMPGITIKRGESEMLLIDKQEIKTQVTVNDGETIVLGGIFQQ 455 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 K + + VPLL DIP G +FR D ++ RRELV+FITP+L+S+ Sbjct: 456 KKRQSVNKVPLLADIPLLGAMFRQDTQQQSRRELVIFITPKLISA 500 >UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRB5_PSYIN Length = 689 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 162/398 (40%), Positives = 243/398 (61%), Gaps = 12/398 (3%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 A + + ++L D+PV VLQ +A+ NLV++ VSG ++L L DVPW+QAL ++K Sbjct: 292 AYQGKAISLNFQDIPVRTVLQLIADFNGFNLVITDSVSGNITLRLDDVPWEQALDIILKV 351 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGE----L 132 GL +GN+L + A + R++ E A ANL PL + I + YA + L Sbjct: 352 KGLGKSLDGNVLMIAP-AVELAAKKREQLESENAVANLAPLYSEFIQVNYAKVADISAML 410 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 + LLS +G+++VD RTN LL++D + A+++ + +D+PV QV + A +VT+++ Sbjct: 411 SSDKTSLLSERGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQVVIEARMVTVDD 470 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI-NGRLLDLELSAL 251 ELGVKW + + V +L +L A + F + + NG +LDLELSAL Sbjct: 471 SVSEELGVKWGMTSTSSS----TVDSLNVNLPATDAAGTIAFKLAKFSNGDILDLELSAL 526 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVL 311 E + + +IIASPR+ ++ Q A I+QG+EIPY V S SGATSV FK+AVL + VTP + Sbjct: 527 ESENKAEIIASPRITTANQQTAYIEQGTEIPY-VESASSGATSVAFKKAVLSLTVTPQIT 585 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 ++ L L I+Q+ G+ + GE +AID Q+I TQV V +GETL LGGI+ ++N Sbjct: 586 PDNKVILDLEITQDTVGETVSAGTGEAVAIDTQKIGTQVLVGNGETLVLGGIYQQRNSIA 645 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VPLLGDIP+ G LFR +E+ + EL++F+TPR+V Sbjct: 646 VSKVPLLGDIPYLGALFRSTNEENTKSELLIFVTPRIV 683 >UniRef50_D0ZFZ5 Type II secretory pathway, component HofQ n=2 Tax=Edwardsiella RepID=D0ZFZ5_EDWTE Length = 409 Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 172/403 (42%), Positives = 238/403 (59%), Gaps = 12/403 (2%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 ML+ A + +TL D P+ VLQA+AE LNL++S +V G +LH+ PW + Sbjct: 1 MLLAMSSAGQAMPLTLWFDRAPLPSVLQAVAEFAGLNLILSEEVRGEATLHIAHTPWPRV 60 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 L + + L + IL + S A A + ++ + L++ADA Sbjct: 61 LDALAEIYDLSVVRRDGILLIQSRARAARQAGPAAAPALLKPPQM--RSQRVVLRHADAA 118 Query: 131 ELAKA---GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 + K+ LL GS D RTN LLLR L+AL W+AQ+D+P+ QV+L+AHI Sbjct: 119 TVEKSLRQRRDLLGEAGSAVADIRTNALLLRAEAARLAALRDWIAQLDVPLSQVQLAAHI 178 Query: 188 VTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE 247 V+I+++ LRELG++W D + +GG ++ A A GF + RI G+ L + Sbjct: 179 VSISQEGLRELGIRWYSGD-ERSGGQDRLR------GAADAYFSAGFQVARIGGQTLAVA 231 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 L+ALE++ ++ IIASP L+A+H Q ASIKQGSE+PY VS GE G +++EFKEAVLGM VT Sbjct: 232 LAALERQDKVAIIASPHLMAAHGQTASIKQGSELPYAVSGGERGVSTMEFKEAVLGMSVT 291 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 P VL I L L ISQN+PG+V++Q D E LAIDKQEI TQV + G+T LGGIF + Sbjct: 292 PRVLADAHIELALQISQNMPGRVVRQGDSEALAIDKQEITTQVTLSDGDTAMLGGIFQYQ 351 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + P L D+P G L R D + RRELV+FITP L+S Sbjct: 352 RQVDSIGFPWLADVPLLGHLLRSDSQRSGRRELVIFITPTLLS 394 >UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae RepID=COME_HAEIN Length = 445 Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 162/436 (37%), Positives = 251/436 (57%), Gaps = 31/436 (7%) Query: 1 MKQWI----AALLLMLIPGVQAAKP----QKVTLMVDDVPVAQVLQALAEQEKLNLVVSP 52 MK++ L+ +P + A P ++ + + P+AQ L+ LA Q+ +NLV+ Sbjct: 1 MKKYFLKCGYFLVCFCLPLIVFANPKTDNERFFIRLSQAPLAQTLEQLAFQQDVNLVIGD 60 Query: 53 DVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQ 112 + +SL L ++ + LQ + KS L ++ I ++ +A Sbjct: 61 ILENKISLKLNNIDMPRLLQIIAKSKHLTLNKDDGIYYLNGSQSGKGQVA------GNLT 114 Query: 113 ANLP-LENRSITLQYADAGELAKA----GEKLLSAKGSMTVDKRTNRLLLRDNKTALSAL 167 N P L + ++ L +A A EL K+ LLS GS+T D R+N L+++D ++ + Sbjct: 115 TNEPHLVSHTVKLHFAKASELMKSLTTGSGSLLSPAGSITFDDRSNLLVIQDEPRSVQNI 174 Query: 168 EQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL----ADAQHAGGV---GQVTTLG 220 ++ +A+MD P+ Q+ + A IVTI ++SL+ELGV+W + +A+ G + Sbjct: 175 KKLIAEMDKPIEQIAIEARIVTITDESLKELGVRWGIFNPTENARRVAGSLTGNSFENIA 234 Query: 221 SDLSVATATT-----HVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 +L+V ATT + + +INGRLLDLELSALE++ ++IIASPRLL ++ + ASI Sbjct: 235 DNLNVNFATTTTPAGSIALQVAKINGRLLDLELSALERENNVEIIASPRLLTTNKKSASI 294 Query: 276 KQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 KQG+EIPY VS+ + SVEF+EAVLG+EVTP + + I L L +SQN PG + Sbjct: 295 KQGTEIPYIVSNTRNDTQSVEFREAVLGLEVTPHISKDNNILLDLLVSQNSPGSRVAYGQ 354 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 EV++IDKQEI TQV K GET+ LGG+F +D VPLLGDIP +LF + + Sbjct: 355 NEVVSIDKQEINTQVFAKDGETIVLGGVFHDTITKSEDKVPLLGDIPVIKRLFSKESERH 414 Query: 396 ERRELVVFITPRLVSS 411 ++RELV+F+TP ++ + Sbjct: 415 QKRELVIFVTPHILKA 430 >UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteobacteria RepID=A0KN30_AERHH Length = 733 Score = 274 bits (700), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 167/421 (39%), Positives = 249/421 (59%), Gaps = 37/421 (8%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + ++L D+PV VLQ +A+ LNLV + VSG ++L L VPW+QAL ++K GL Sbjct: 315 KPISLNFQDIPVRTVLQLIADFNNLNLVTTDSVSGNITLRLDGVPWEQALDIILKVRGLD 374 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQ--ARAQ-ANL-PLENRSITLQYADAGE----LA 133 R + NIL V IA +E +Q +R Q A+L PL + + YA A E L+ Sbjct: 375 KRLDNNILLVAPA----EEIAAREKQQLESRNQVADLAPLYTEYLQINYAKASEVAALLS 430 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 KLLS+KG+++VD+RTN L+++D +S +++ + +D+PV QV + A +VTI++ Sbjct: 431 SESTKLLSSKGAVSVDERTNVLVVKDTADVISNIKRMLDILDIPVKQVVIEARMVTIDDG 490 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSD-----------------------LSVATATT 230 LGV+W + G T G+D L V A Sbjct: 491 FDEALGVRWGVTKNDGHGNSTSGTIEGNDSSGNNNGGSTITRPGVDDRLNVNLPVTNAAG 550 Query: 231 HVGFNIGRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 + F + R+ +G LLDLELSALE++ + +IIASPR+ ++ +PA I+QG+EIPY V S Sbjct: 551 TLAFQVARLADGTLLDLELSALEKESKAEIIASPRVTTANQKPALIEQGTEIPY-VESSS 609 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 SGATSV FK+AVL ++VTP + R+ L L ++Q+ G+ + G+ ++I+ Q I TQ Sbjct: 610 SGATSVTFKKAVLSLKVTPQITPDNRVILDLTVTQDTKGETVPTGTGDAVSINAQSITTQ 669 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V V +GETL LGGI+ + KS VPLLGDIP G LFR E+++REL++F+TP++V Sbjct: 670 VLVNNGETLVLGGIYQQTIKSDVSKVPLLGDIPGLGVLFRKTTSENKKRELLIFVTPKIV 729 Query: 410 S 410 + Sbjct: 730 T 730 >UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vibrionaceae RepID=C9QNG5_VIBOR Length = 563 Score = 271 bits (692), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 154/408 (37%), Positives = 252/408 (61%), Gaps = 22/408 (5%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K+++ D+PV VLQ +A+ NLVVS VSG ++L L +PW+Q L +++ GL Sbjct: 156 KKISINFQDIPVRHVLQLIADYNDFNLVVSDSVSGNLTLRLDGLPWQQVLDVILQVKGLD 215 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELAK--AGE- 137 R N++ + A + R+E E+AR +A L L + + +++A A E+A GE Sbjct: 216 KRVMDNVVLIAPQAELDAR-HREELEKARLEAELGELRSEIVKVKFAKASEIASMIGGEG 274 Query: 138 --KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 +LS++G+++VD+RTN LL+RD + + +++ ++ +D+PV QV++ A IVT++E +L Sbjct: 275 AISMLSSRGALSVDERTNALLIRDLQPNIDVIQELISALDIPVKQVQIEARIVTVHEGNL 334 Query: 196 RELGVKWTLADAQHAGGVGQ--------VTTLGSDLSVATATTHV-----GFNIGRI-NG 241 ELGV+W + + +G + L+V A T V F + ++ + Sbjct: 335 DELGVRWGYHNTNGSTSLGSSIEDNVFGAVPIDDMLNVNLAATSVNASSIAFQVAKLGSD 394 Query: 242 RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAV 301 LLDLELSAL+++ + ++I+SPRL+ ++ +PA I+QG+EIPY + S SGATSV FK+AV Sbjct: 395 MLLDLELSALQRESKAEVISSPRLITTNKKPAYIEQGTEIPY-LESSSSGATSVAFKKAV 453 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 L ++V P + R+ L L ++Q+ PG +++ GE +AI+ Q I TQV V +GET+ LG Sbjct: 454 LSLKVVPQITPDNRLVLDLSVTQDRPGDIVKTGTGEAVAINTQRIGTQVLVDNGETVVLG 513 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 GIF D VP+LGD+P G LFR ++ + EL++F+TP++V Sbjct: 514 GIFQHSVTDAVDKVPMLGDLPLLGALFRRTYQKMGKSELLIFVTPKVV 561 >UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gammaproteobacteria RepID=B7VLJ8_VIBSL Length = 572 Score = 270 bits (690), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 161/417 (38%), Positives = 255/417 (61%), Gaps = 34/417 (8%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 +++ D+PV VLQ +A+ NLVVS V+G ++L L VPW+Q L +++ GL R Sbjct: 157 ISINFQDIPVRNVLQLIADYNDFNLVVSDSVTGNLTLRLDGVPWQQVLDIILQVKGLDKR 216 Query: 84 QEGNILSVHSIAWQNNNIARQEA-EQARAQANL-PLENRSITLQYADAGELAK--AGE-- 137 +GN++ V A + + Q+A E++R + L L++ I + +A A ++A GE Sbjct: 217 VDGNVILVAPKAELD--LREQQALEKSRLEEELGELKSEIIKINFAKATDIADMIGGEGA 274 Query: 138 -KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 +LS +GS+T+D+RTN LL+R+ + ++ + + +D+PV QV++ A IVT+ E +L Sbjct: 275 VSMLSERGSITIDERTNSLLIRELEENIAVIRGIIESLDIPVKQVQIEARIVTVTEGNLD 334 Query: 197 ELGVKWTLADAQHAGGVG---------QVTTLGSD---------LSV-----ATATTHVG 233 ELGV+W ++ + VG Q+T + L+V + + + + Sbjct: 335 ELGVRWGVSSTNGSFKVGGSIEGNHPSQITPYDDNGGNSAIDDFLNVNLGATSPSASSIA 394 Query: 234 FNIGRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 F + ++ + LLDLELSAL+Q+ + +II+SPRL+ ++ +PA I+QG+EIPY + S SGA Sbjct: 395 FQVAKLGSDTLLDLELSALQQESKAEIISSPRLITTNKKPAYIEQGTEIPY-LESSSSGA 453 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 TSV FK+AVL ++VTP + R+ L L ++Q+ PGQV++ GE +AID Q I TQV V Sbjct: 454 TSVAFKKAVLSLKVTPQITPDNRLVLDLSVTQDRPGQVVKTGTGEAVAIDTQRIGTQVLV 513 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +GET+ LGGIF S D VPLLGD+P G LFR + + EL++F+TP++V Sbjct: 514 NNGETVVLGGIFQHSVSSQVDKVPLLGDLPVLGALFRRSYENVGKSELLIFVTPKVV 570 >UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Proteobacteria RepID=Q489N5_COLP3 Length = 706 Score = 268 bits (684), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 157/423 (37%), Positives = 250/423 (59%), Gaps = 42/423 (9%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + ++L D+PV VLQ +A+ + NL++S V+G ++L L VPW QAL ++K GL Sbjct: 289 RSISLSFQDIPVRTVLQIIADYNEFNLIISDTVTGNITLRLDGVPWDQALSIILKVKGLD 348 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGELAK--- 134 R +GNIL V ++ +A +EA+ +A+ + L + + + YA A E ++ Sbjct: 349 KRMQGNILMVAP----SDELAAREAQSLQAKQQVEELATLYSEYLQINYAKAAEFSELIK 404 Query: 135 -AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 +LS +GS++VD+RTN LL+RD ++ +++ + +D+PV QV + A +VT+ + Sbjct: 405 NEDTSILSDRGSVSVDERTNTLLIRDTAKSIEDIKRMITILDVPVRQVVIEARMVTVKDN 464 Query: 194 SLRELGVKW--TLADAQHAG-------------------GVGQVTTLGS----DLSVATA 228 ELG++W T D + A GVGQV T+G +L VA A Sbjct: 465 MNEELGIRWGVTNTDGEFATSGSIEGASSANGTRGVTTPGVGQVPTIGDGLNVNLPVANA 524 Query: 229 TTHVGFNIGRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS 287 + F + R+ NG +LDLELSALE++ + ++IASPR+ ++ + A I+QG EIPYQ + Sbjct: 525 AGTIAFQVARLANGTILDLELSALEKENKGEVIASPRITTANQKEAYIEQGVEIPYQ-EA 583 Query: 288 GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIE 347 SGAT+ +FK+AVL + VTP + +I L L ++Q+ + G AID Q I Sbjct: 584 ASSGATATQFKKAVLSLTVTPHITPDDKIILDLVVTQDTISDI---TSGFAPAIDTQRIG 640 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 TQV V +GET+ LGGI+ + S +P+LGDIP+ G LFR+ + +E++EL++F+TPR Sbjct: 641 TQVLVNNGETIVLGGIYQQAIISTVSKIPILGDIPYLGWLFRNSSQLNEKKELLIFVTPR 700 Query: 408 LVS 410 +V+ Sbjct: 701 IVT 703 >UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella RepID=A8GZ28_SHEPA Length = 688 Score = 266 bits (681), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 160/415 (38%), Positives = 249/415 (60%), Gaps = 31/415 (7%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + ++L ++ V VLQ +A+ NLV S V G ++L L DVPW QAL ++++ GL Sbjct: 276 RSLSLNFQNISVRTVLQIIADYNNFNLVTSDTVEGDITLRLDDVPWDQALDLILQAKGLD 335 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGELAK--A 135 R EGNIL V I IA +E+++ + + PL + + + YA A ++A Sbjct: 336 KRIEGNILMVAPI----EEIAIRESQELKNMQEVKELAPLYSEYLQINYAKAVDIAALLK 391 Query: 136 GE--KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 GE LL+++GS+ VD+RTN LL++D + L + + + +D+P+ QV + A +VT+ + Sbjct: 392 GEDSSLLTSRGSVAVDERTNTLLVKDTEETLENIHRLIEVLDIPIKQVLIEARMVTVKDD 451 Query: 194 SLRELGVKWTLADAQHAGGV------------GQVTTLGSDLSV----ATAT-THVGFNI 236 +LGV+W + D Q G G V +L L+V A A T + F++ Sbjct: 452 VSEDLGVRWGVTDQQGDKGTSGSLEGAGDIANGIVPSLSDRLNVNLPAAVANPTSIAFHV 511 Query: 237 GRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSV 295 ++ +G +LDLELSALEQ+ + +IIASPR+ S+ + A I+QG EIPY V + SGAT+V Sbjct: 512 AKLADGTVLDLELSALEQENKGEIIASPRITTSNQKAAFIEQGVEIPY-VEASSSGATTV 570 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 FK+AVL + VTP + R+ L L I+Q+ G+ + G+ ++ID Q I TQV V G Sbjct: 571 TFKKAVLSLRVTPQITPDNRVILDLEITQDSQGKTVDTPTGQAVSIDTQRIGTQVLVDHG 630 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 ET+ LGGI+ ++ S VP+LGDIP+ G +FR ++ER+EL++F+TP++VS Sbjct: 631 ETIVLGGIYQQQLISRVSKVPILGDIPYLGFMFRSTSDKNERQELLIFVTPKIVS 685 >UniRef50_Q7NA54 Similarities with protein transport protein HofQ of Escherichia coli n=2 Tax=Photorhabdus RepID=Q7NA54_PHOLL Length = 344 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 142/297 (47%), Positives = 191/297 (64%), Gaps = 6/297 (2%) Query: 117 LENRSITLQYADAGELA----KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVA 172 +++ S LQYADA +A + L++ +G + D TN L+L+D A++ ++ W+ Sbjct: 48 IQSLSTVLQYADAERIAMNLRQNTPALITKEGKVDFDPETNSLILQDTPIAIAQIKSWLK 107 Query: 173 QMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHV 232 ++D P QV+++AHIVT + ++L ELG+ W + + + L + + Sbjct: 108 EIDTPQQQVQITAHIVTSSREALHELGIYWGMPIGEQINTSTGINRLNINQAANDNMHRF 167 Query: 233 GFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 FNI RI+ LL++ELSALEQ+ QLDIIASPRL ASH Q ASIKQGS+IPY S E Sbjct: 168 AFNIARIHTSLLEMELSALEQENQLDIIASPRLTASHQQLASIKQGSDIPY--VSQEKEK 225 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 ++V+FKEAVLGMEVTP +L+K +IRL L ISQN+PG + Q GE L IDKQEI TQV V Sbjct: 226 STVQFKEAVLGMEVTPHILRKNKIRLSLKISQNMPGISISQGGGENLTIDKQEIITQVTV 285 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 K+GETL LGGIF +K VP L DIP G LF + RRELV+FITP+L+ Sbjct: 286 KNGETLILGGIFQQKKGEQTQKVPYLSDIPLLGSLFNQKAHKHSRRELVIFITPQLM 342 >UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7W7_KANKD Length = 701 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 153/411 (37%), Positives = 245/411 (59%), Gaps = 29/411 (7%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + +TL D+ + +L L + +N+V+S DV G+++L+L +VPW QAL ++KS GL Sbjct: 291 ETLTLQFQDMDLKAILHTLGDFAGINIVISDDVQGSMALNLVNVPWDQALDIILKSKGLG 350 Query: 82 TRQEGNILSVH--SIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELA----- 133 RQEGN++ + I Q +QE E + Q L PL I + YA A E+A Sbjct: 351 KRQEGNVMMIAPADIIAQRE---QQELEANKQQEELAPLRTELIQVNYAKAAEIAAILQA 407 Query: 134 --------KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 +LS +GS+T D+RTN +L++D T + + + VAQ+D+PV QV + A Sbjct: 408 GLGGGSGDGKSVGILSERGSVTTDQRTNTILVQDVSTKIEDVRRLVAQLDIPVRQVLIEA 467 Query: 186 HIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI-NGRLL 244 IVT ++ R+LG ++ ++D ++G V +L +A +G + R+ +G ++ Sbjct: 468 RIVTADDGFARDLGSRFGVSDVMNSGEVN--GDFNVNLPIANPAGSLGLSFARLQDGIVV 525 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGM 304 D+ELSALE + + +++ASP+++ ++ + A IK G EIPY + SGA +V+FKEAVL + Sbjct: 526 DMELSALESENRGEVVASPKVITANQKEAFIKAGEEIPY-LQGASSGAANVQFKEAVLEL 584 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQ--VLQQADGE----VLAIDKQEIETQVEVKSGETL 358 +VTP + GR+ L L I+Q+ G+ + DG AI+ QEI TQV V +GET+ Sbjct: 585 KVTPQITPDGRVILDLAITQDTRGENVIFTSPDGGGSSGAPAINTQEIGTQVLVDNGETI 644 Query: 359 ALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 LGGIF + + VPLLGDIP G LF++ +ED ++EL++F+TP+++ Sbjct: 645 VLGGIFQHRTTYDESKVPLLGDIPLLGWLFKNTQREDTKQELLIFVTPKII 695 >UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Tax=Idiomarina RepID=Q5QV49_IDILO Length = 427 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 146/398 (36%), Positives = 232/398 (58%), Gaps = 26/398 (6%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 Q V+L +P+ ++Q LA+Q +LN++++ +V G SL L V W+ A T++ S L Sbjct: 43 QPVSLNTRKMPLRDLIQLLADQHQLNILMTDNVKGESSLKLNGVAWQDAFATLIASHDLA 102 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK----AGE 137 R +G++L + ++A + + ++ L ++ +A A +LAK + Sbjct: 103 IRLQGSMLRI--------DVAGEHTTDSNEYHSILL-----SVNFAKASDLAKLLKNEQQ 149 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 LS G+++VD RTN L+LRD L+ + Q V +D+PV QV + A +VT+ +E Sbjct: 150 SFLSPNGAVSVDARTNTLILRDTPEQLATIRQLVNDLDVPVKQVLIEARMVTVKANVSKE 209 Query: 198 LGVKWT-----LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGR-LLDLELSAL 251 LG++W LA + AG V + DL A N+ R++ LLDLEL+AL Sbjct: 210 LGIRWGVSEYGLAIPEDAGSF--VKGMQVDLPTAAPAGTFSANLARLSDDILLDLELTAL 267 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVL 311 EQ+ + +II SP++ S+ QPA I+QG+EIPY V + GAT+V+FK+AV+G+ VTP + Sbjct: 268 EQENKAEIITSPKIFTSNQQPAYIEQGTEIPY-VETAAHGATAVQFKKAVMGLSVTPQIT 326 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 + ++L I+QN G + G +AID QE+ T+V K+GET+ LGGIF N + Sbjct: 327 PNNHVLMELTITQNTRGDTVATPTGPAVAIDTQEMSTRVLAKNGETIVLGGIFQEHNLND 386 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VP+LG +P G+LF H + DE+REL++F+TP ++ Sbjct: 387 DSRVPILGSLPLIGKLFSHQQQRDEKRELMIFVTPTIL 424 >UniRef50_B1J2J3 Type IV pilus secretin PilQ n=5 Tax=Pseudomonas RepID=B1J2J3_PSEPW Length = 422 Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 152/419 (36%), Positives = 247/419 (58%), Gaps = 14/419 (3%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MK +AALL M + + + ++L DV V VLQ LA+ +NLV S V G+++L Sbjct: 5 MKWLVAALLPMPLLAATPYRGEPISLNFQDVEVRLVLQVLADYAGINLVASDTVQGSITL 64 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVH-SIAWQNNNIARQEAEQARAQANLPLEN 119 L DVPW QAL+ V++S GL R+EGN+L V ++ + + + AQ+ PL Sbjct: 65 RLQDVPWDQALELVLRSKGLGRREEGNVLLVAPAVELAEQALGARMGLELEAQSR-PLRR 123 Query: 120 RSITLQYADAG------ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQ 173 + + +A+A A + +L+ +GS++VD RTN L+ + L+ L Q VAQ Sbjct: 124 ELLPIHHAEASELAELLLATLADDGILTGRGSLSVDVRTNTLVAHQPEDRLAELRQLVAQ 183 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVG 233 +D+PV QVE+ A IV N LGV+W A +G+ + DL + A + +G Sbjct: 184 LDVPVRQVEIEARIVEANVDYENSLGVRWGPRLYSEAPALGKDVFV--DLGMERAGSSIG 241 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 F + R G LLDLELSA+E+ +II+ P+++ ++ + A I +G+E+PYQ ++ +SGAT Sbjct: 242 FGVLR-GGVLLDLELSAMEKTGNGEIISQPKVVTANNETARILKGTEVPYQETT-KSGAT 299 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 SV F+EA L +EVTP + G++ + + ++++ P V A +V I K E+ +V V Sbjct: 300 SVTFREASLSLEVTPQITPDGKVIMTVKVTKDEPDFV--NALNDVPPIRKNEVNAKVRVA 357 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 GET+ +GG+++ + D VP GD+P+ G+LFR D ++++ EL+VF+TPR+++ + Sbjct: 358 DGETIVIGGVYSTTQNNVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIMNDQ 416 >UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3G3_9GAMM Length = 672 Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 248/428 (57%), Gaps = 49/428 (11%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L ++ V VLQ LA+ +NLV S V G ++L L +VPW QAL ++K+ GL Sbjct: 248 EKLSLNFQNIEVRAVLQLLADFTGMNLVTSDTVKGNLTLRLKNVPWDQALDIILKTKGLA 307 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGELA---- 133 RQ GN+L V A IA +E ++ AQ L PL + +++A A LA Sbjct: 308 MRQNGNVLMVAPAA----EIAAREKQELEAQKQLVELEPLYTEIVEIKFAKADLLATLLR 363 Query: 134 -------KAGEK-LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 +G+ LS +GS+T+D RTN LL+RD L + Q + ++D PV QV + + Sbjct: 364 TDGKQGGNSGQSGFLSPRGSITIDDRTNSLLIRDTADNLVDIRQVIDELDKPVRQVLIES 423 Query: 186 HIVTINEKSLRELGVKWTLADAQH---AGGVGQVTTL----------------GSDLSV- 225 IV N +ELGV++ + + AG G +T L G+DL+V Sbjct: 424 RIVIANNDFNKELGVRFGTSAQSNTLGAGSSGSLTGLSTNPNNDDQIRANSVVGNDLNVN 483 Query: 226 ---ATATTHVGFNIGRIN-GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEI 281 + + +G + ++ G +L+LELSA++ + + ++I+SPR++ S+ Q A+I+QG+EI Sbjct: 484 LPVSNPSGSIGLALAKLPLGMILELELSAMQAEGKGEVISSPRVITSNQQQATIEQGTEI 543 Query: 282 PYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAI 341 PYQ ++ SGAT+V FKEAVL ++VTP + RI + L +S++ G+V V +I Sbjct: 544 PYQEATS-SGATNVSFKEAVLKLDVTPQITPDDRIVMDLEVSKDEVGEVFLG----VPSI 598 Query: 342 DKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELV 401 D + ++TQV V +GET+ LGGI+ + + VP GD+P+ G LF++ KED +REL+ Sbjct: 599 DTRSVKTQVLVDNGETVVLGGIYEQSTNDNVERVPFFGDLPYVGFLFKNTFKEDRKRELL 658 Query: 402 VFITPRLV 409 VF+TP++V Sbjct: 659 VFVTPKIV 666 >UniRef50_Q1YS04 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=Gammaproteobacteria RepID=Q1YS04_9GAMM Length = 754 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 166/468 (35%), Positives = 243/468 (51%), Gaps = 84/468 (17%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 A +++TL D+ V VLQ +AE LNLV S V+G ++L L DVPW QAL+ ++K+ Sbjct: 288 AFNGERLTLDFQDIEVRSVLQIIAEFTSLNLVASDTVTGNITLWLDDVPWDQALEIILKA 347 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGEL- 132 GL RQEGN+L V A IA QE Q A L PLE + ++YADA E+ Sbjct: 348 KGLDKRQEGNVLMVAPAA----EIAEQERLQVEANKQLQELAPLETTFVRIKYADAAEIF 403 Query: 133 -------------------AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQ 173 A +LS +GS VD+RTN ++L D + ++A ++ + + Sbjct: 404 ELFTASRGDEGQSSSGGREGNATTTILSERGSAIVDERTNTIILTDTEDKINAFKRLIDE 463 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQH------------------------ 209 +D+P+ QV + A IV N +ELGV W LA + Sbjct: 464 IDVPIKQVLIEARIVIANTDFKKELGVTWGLAGIEKLTGGTIGSPFGDKTLGFSGRRSGL 523 Query: 210 --AGGVGQVTTLGSD--------LSVATATTHVG-----------------FNIGRI-NG 241 GV + T +D ++ T +G F++G + + Sbjct: 524 TPGAGVKETFTYSADEIETDDDGITTYTRNYDIGLGDSLAVDLGVDNPTGSFSLGYLTDN 583 Query: 242 RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAV 301 L+DLELSALE +I++ P++L Q A IK G+EI YQ ++ SGATS+EFKEAV Sbjct: 584 FLIDLELSALESDGFGEIVSQPKVLTGDKQQAVIKSGTEIAYQKATS-SGATSIEFKEAV 642 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 L +EVTP + RI + L +SQ+ G + +ID +IETQ V +G+TL L Sbjct: 643 LQLEVTPQITPDNRIIMDLLVSQDSVGAFTPTGEP---SIDITQIETQALVGNGQTLVLE 699 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 GIF + +G D VPLLGD+P+ G+LFR+D + E+RE++ FITP+++ Sbjct: 700 GIFQTEEVNGTDKVPLLGDLPFLGKLFRNDLRNIEKREILSFITPKII 747 >UniRef50_D2U379 Protein transport protein HofQ n=1 Tax=Arsenophonus nasoniae RepID=D2U379_9ENTR Length = 347 Score = 247 bits (630), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 138/294 (46%), Positives = 194/294 (65%), Gaps = 8/294 (2%) Query: 121 SITLQYADA----GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 S LQYA+A +L++ LLS KG + DK+TN L+ D + + L+ W+ ++D+ Sbjct: 57 SYPLQYAEAELLASQLSQNNPPLLSKKGKVFADKQTNNLIFEDTQRHIERLQSWLKKIDI 116 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI 236 P QV+++A+I+ + ++L ELG+ W L+ + VG ++ L ++ H+ FNI Sbjct: 117 PQQQVQITAYIINTSREALYELGIFWELSSDK-INQVG-ISRLNIHQPAPSSIPHIAFNI 174 Query: 237 GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 +I LL LELSALEQ+ QL IIASPRL+ASH ASIKQG+EIPY + S + ++ Sbjct: 175 AKIKSHLLSLELSALEQENQLSIIASPRLMASHNHSASIKQGTEIPYIIQS--KNKSQIK 232 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 FKEA+LGMEVTPT+L+ G++RL L ISQN P L + +AI+KQEI TQV + GE Sbjct: 233 FKEAILGMEVTPTILRGGKVRLALKISQNTPNTSLLANTYQHIAINKQEISTQVTINHGE 292 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 TL LGGIF +K + Q +P L DIP+FGQLF DGK+ RELV+FITP+L++ Sbjct: 293 TLILGGIFQQKKNNQQQKIPYLADIPFFGQLFTKDGKQTYHRELVIFITPQLIN 346 >UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae RepID=A7JQ17_PASHA Length = 437 Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 149/436 (34%), Positives = 233/436 (53%), Gaps = 45/436 (10%) Query: 8 LLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPW 67 + + + G A +++++ + P + + LAE+ N+V+ ++ +L L + Sbjct: 4 IFIYFLCGFSLAYANTISIVLKNAPTSLIFTYLAEETGKNMVLDDNIETKSTLRLENKSV 63 Query: 68 KQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN-------- 119 + +T+ K L QE +I+ +H ++ E+A LP+ N Sbjct: 64 DEIFKTLGKVNKLSLTQEDDIVYIH-----------KKEEKAADLTPLPIMNLQNNGQNT 112 Query: 120 ----------RSITLQYADAGE----LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALS 165 +++ L YA A E L K LS G + D+R+N L+++D+ +L Sbjct: 113 PLVTAPKLITKTLKLHYAKASEVIESLTKGSGTFLSENGYIHFDERSNSLIVKDSAKSLK 172 Query: 166 ALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLAD--AQHAGGVGQVTTLGSDL 223 +E V Q+D P Q+ + A IVTI+ + L+ELGV+W + A H G++ G + Sbjct: 173 NIENLVKQLDQPTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGHYKFGGRLEGNGLNN 232 Query: 224 SVA--------TATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 T + IN R+LDLELSALEQ+ ++IIASPRLL ++ +PASI Sbjct: 233 VTNNLNVNFPITGGASAVLQVSSINSRVLDLELSALEQENSVEIIASPRLLTTNKKPASI 292 Query: 276 KQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 KQG+EIPY + + +S AT VEFKEAVLG+EV P + + +I L L ++QN P Q Sbjct: 293 KQGTEIPYVMYNTKSEATDVEFKEAVLGLEVVPHLSTQNQILLDLIVTQNSPNS--QSGS 350 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 ++ IDKQE+ TQV K GET+ LGGIF + G+D VP+LG IP+ +LF + Sbjct: 351 SGLITIDKQELNTQVFAKHGETIVLGGIFQHLTQKGEDKVPILGSIPFIKRLFSQTRDKI 410 Query: 396 ERRELVVFITPRLVSS 411 +RELV+F+TP ++ S Sbjct: 411 SKRELVIFVTPYILQS 426 >UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A4Y8_ALHEH Length = 694 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 145/405 (35%), Positives = 225/405 (55%), Gaps = 23/405 (5%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 +TL DV V +VLQ LA+ +N V+S V G ++L L +VPW AL+ ++++ GL R Sbjct: 285 ITLDFQDVEVRRVLQILADFNDMNAVISDSVDGRLTLRLVEVPWDHALEIILEAQGLDVR 344 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA---KAGE-KL 139 + GN+L+ +E + PL + I + YA A ++A K E L Sbjct: 345 ERGNVLTFAPTEELAARDRAREEARRTVDEVAPLSSAFIQVNYARAEDIANLLKGDETSL 404 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 LS +G + +D+RTN L+++D + + + V ++D+PV QV + + IV ++ R+LG Sbjct: 405 LSERGQVAIDERTNLLIVQDMERNIDDIRNLVNRLDIPVQQVLIESRIVIADDDFSRDLG 464 Query: 200 VKWTLADAQHAG--------------GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLD 245 V++ G G+ L DL +G IGRI RLL Sbjct: 465 VRFGYTATGSLGSEGTAIGARPTPTPGIDGTDDLMVDLPAPAEAPRLGLAIGRIGDRLLQ 524 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGME 305 LELSA+E + + ++I+SPR++ ++ + A+I+QG EIPYQ + SGAT+VEFKEAVLG+ Sbjct: 525 LELSAMETEGRGEVISSPRVITANQREANIRQGVEIPYQEETA-SGATNVEFKEAVLGLT 583 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 VTP + R+ + L +S + G+V V +ID Q + TQV V +GET+ LGG++ Sbjct: 584 VTPQITPDDRVIMNLEVSNDTVGEVF----AGVPSIDTQSVTTQVLVDNGETVVLGGVYE 639 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 R + VP G +P G LFR+ DE+ EL+VF+TPR++ Sbjct: 640 RASGEQTRRVPFFGSLPGVGWLFRNRLTFDEQSELLVFVTPRILD 684 >UniRef50_Q1Q8Q7 Type II and III secretion system protein n=5 Tax=Moraxellaceae RepID=Q1Q8Q7_PSYCK Length = 792 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 143/444 (32%), Positives = 229/444 (51%), Gaps = 73/444 (16%) Query: 30 DVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNIL 89 DV + VL LA+ ++N+V S V+G ++L L +VPW QAL ++KS L R+ GN++ Sbjct: 352 DVEIRSVLDILAQFTEMNIVASDSVAGNITLRLINVPWDQALDIILKSKNLGKRENGNVI 411 Query: 90 SVHSIAWQNNNIARQEAEQARAQ----ANLPLENRSITLQYADAGEL------------- 132 V + +A QEA + AQ + PL I L YA A ++ Sbjct: 412 LVAP----STELAEQEARELEAQQAVESYAPLRTEYIRLSYAKAADVLTLISQGSGGASG 467 Query: 133 ----------AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE 182 K LLS +G++TVD+RTN L+++D ++ + + + ++D+PV QV Sbjct: 468 GSNTGSANANTKDSNSLLSNRGTVTVDERTNTLIVKDVAASIENIHKLIGKIDIPVRQVM 527 Query: 183 LSAHIVTINEKSLRELGVKWTL-------------------------ADAQHAGGVGQVT 217 + A IV+ + +E+GV+W + D Q GQ Sbjct: 528 IEARIVSATDSFSKEIGVRWGILSNGAANNRNLLVGGSNQTLWDLKDFDVQTTTINGQTV 587 Query: 218 T-----------LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLL 266 + L DL V + F + I+ +LDLELSA++ + ++I++P++L Sbjct: 588 SYPKYDITRPDNLNVDLGVDNPAGRIAFGLLGISDFMLDLELSAMQADNRGEVISTPKIL 647 Query: 267 ASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNV 326 S Q A + G++IPYQ +S SGAT+ FKEA L +E TP + G+I L+L I+ Sbjct: 648 TSDKQTAKVSSGTQIPYQEASA-SGATTTSFKEAALSLEATPNITPDGKIGLQLLITNGT 706 Query: 327 PGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQ 386 P + Q +AI + I T V V+ G+T+ LGG+F + +G D VP LGD+P+ G+ Sbjct: 707 PTIINNQ-----VAIAEDSISTNVIVEDGQTIVLGGVFKNRTNNGVDKVPFLGDLPYIGR 761 Query: 387 LFRHDGKEDERRELVVFITPRLVS 410 FR D + + + EL++FITP+L++ Sbjct: 762 AFRKDVRSNTKEELLIFITPKLIN 785 >UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZY4_CHRSD Length = 668 Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 153/413 (37%), Positives = 237/413 (57%), Gaps = 33/413 (7%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + ++L ++ V +VL L++ LN+V S V G+V+L+L VPW QAL +++S GL Sbjct: 257 EPISLNFQNIQVREVLSVLSDFSGLNIVASDSVQGSVTLNLQQVPWDQALALILQSHGLA 316 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAE--QARAQAN--LPLENRSITLQYADAGELA---- 133 +R+ G+++ V + + +A+ E + + RAQ+ PL + ++YA A +LA Sbjct: 317 SRRNGDVIVVAPV----DELAQMERQTLENRAQSEQLAPLVTDYVQVRYAKATDLAAMLR 372 Query: 134 -KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 G LLS +G +TVD+RTN LL+RD + L+++ + ++D+PV QV++ A IV + Sbjct: 373 GSEGFGLLSERGRVTVDERTNTLLVRDTREQLASIRGMLERLDVPVRQVQIEARIVIARD 432 Query: 193 KSLRELGVKWTLADAQHA----GGVGQVTTL---GSDLSVATATTHVG--------FNIG 237 + RELGV W ++ Q GVG V G++ A + +G F+ G Sbjct: 433 TASRELGVNWGISQRQGVTFDDDGVGSVVDRNPSGANRGSAGLSVDLGDSDGSGSTFSFG 492 Query: 238 RINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 ++G LLDLEL ALE + + I+ P+++ ++ + A IKQG EIPYQ S+ SGAT+VE Sbjct: 493 YLSGDVLLDLELRALESEGKSQTISQPKVITANQKTAVIKQGQEIPYQEST-SSGATNVE 551 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 FKEAVL +E TP + G I + L I+ + V + AID IETQV V G Sbjct: 552 FKEAVLSLEATPQITPDGSIVMDLLINNDT---VADNSYDGAPAIDTNSIETQVLVDDGA 608 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 T+ LGGI T + P LGD+P G LFR+ + +E+ EL++FITP ++ Sbjct: 609 TVVLGGILTSEQLRNLYKTPFLGDLPLIGSLFRYTQESNEKVELLIFITPTII 661 >UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteobacteria RepID=A1TYV8_MARAV Length = 704 Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 157/423 (37%), Positives = 236/423 (55%), Gaps = 41/423 (9%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L D+ V VLQ +A+ LNLV S V G+++L L +VPW QAL ++K+ GL Sbjct: 288 EKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVGGSITLRLQNVPWDQALDLILKTKGLD 347 Query: 82 TRQEGNILSVHSIAWQNNNIARQ--EAEQARAQANL-PLENRSITLQYADAGE---LAKA 135 RQ GN+L V A AR+ E E + A L P+ I + YA A + L +A Sbjct: 348 KRQIGNVLLV---APAEEIAAREKLELETNKQIAELAPVRLDIIQVNYAKAADVVALIQA 404 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 E+L+S++G ++ D RTN + +R+ L + + V+ D+PV QV + A IV Sbjct: 405 DEELISSRGFVSSDARTNTISVRETAEKLEEIRRLVSTWDVPVRQVSIEARIVRAQTNVA 464 Query: 196 RELGVKW--------------------TLADAQHAGGVGQVT-----TLGSDLSVATATT 230 +LGV+W TL +A+ A G T LG DL V + Sbjct: 465 EDLGVRWGGAAYNVDGDDVITVGGSLGTLQEARDAASGGSNTISFPGALGVDLGV-SGDG 523 Query: 231 HVGFNIG-RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 F IG + L+DLELSALE + ++++ PR++ + Q ASIK G EIPYQ ++ Sbjct: 524 ASSFAIGWGSDDFLVDLELSALESDGRAEVVSQPRVVTADRQTASIKSGEEIPYQEAT-S 582 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 SGAT++EFKEAVL +EVTP + +I + L ++Q+ G+V + +I+ E+ TQ Sbjct: 583 SGATNIEFKEAVLSLEVTPQITPDDKIIMDLVVNQDSRGEVT----AGIPSINTNEVTTQ 638 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V V +GET+ LGGIF + + P LGDIP+ G+LF+ DER EL++FITP+++ Sbjct: 639 VLVANGETVVLGGIFQSEVATQTTKTPFLGDIPYLGRLFKRTEHIDERSELLIFITPKII 698 Query: 410 SSE 412 ++ Sbjct: 699 KND 701 >UniRef50_Q21H82 Type II and III secretion system protein n=11 Tax=Gammaproteobacteria RepID=Q21H82_SACD2 Length = 727 Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 160/456 (35%), Positives = 235/456 (51%), Gaps = 76/456 (16%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 K++L D+ V VLQ +A+ LNLV S VSG+++L L +VPW QAL V+K+ GL Sbjct: 277 KLSLNFQDIQVRSVLQLIADFTDLNLVASDTVSGSITLRLENVPWDQALDLVLKTKGLDK 336 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGELAK---- 134 RQ G++L V A IA +E ++ Q L PL I ++YA+A EL Sbjct: 337 RQVGSVLMVAPAA----EIAARERQEIETQKQLQELAPLRTEYIRVRYANARELFNLFID 392 Query: 135 --------------------AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 + +LS +G VD+RTN ++L D + + + V ++ Sbjct: 393 TSSGESGGAPGGSGSGSERNSTGSILSERGQAIVDERTNSIILTDTEEKIDDFRRLVDRI 452 Query: 175 DLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG--------GVGQVTTL----GS- 221 D+PV QV + A IV N +ELGV+ DA G++T L GS Sbjct: 453 DIPVRQVMIEARIVIANSDFRKELGVRMA-GDAVETSVSGDTKFEMTGRLTGLTAADGSG 511 Query: 222 --------------------------DLSVATATTHVGFNIGRINGRLLDLELSALEQKQ 255 DL V +N+ N LL +ELSALE Sbjct: 512 PEALFVDTDGDGVTDDERSLLDSSLVDLGVFNPAGAFTWNVISSN-FLLGMELSALENSG 570 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGR 315 +I++ P+++ Q ASI+ G+EIPYQ S SG T+ FKEAVL +EVTP + R Sbjct: 571 YAEIVSQPKVITGDKQKASIESGTEIPYQEESA-SGGTTTSFKEAVLKLEVTPQITPDNR 629 Query: 316 IRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSV 375 + + L I+Q+ + A+ + ID ++ETQV V GET+ LGGI+T +G+ V Sbjct: 630 VIMDLVINQDSISSI--DANSGIPVIDITQLETQVLVADGETIVLGGIYTTNTFTGETKV 687 Query: 376 PLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 PLLGDIP+ G+LFR+D K +++RE+++FITPR+++S Sbjct: 688 PLLGDIPFVGKLFRNDFKSEDKREILIFITPRIMAS 723 >UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Tax=Legionella RepID=Q5X6H2_LEGPA Length = 698 Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 140/420 (33%), Positives = 238/420 (56%), Gaps = 38/420 (9%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++++L ++ + VLQ LA+ +N+VVS V G ++L L D+PW QAL ++ + GL Sbjct: 271 KRISLNFQNISIRAVLQLLADFTGINMVVSDKVQGDITLRLNDIPWDQALDIILTTQGLD 330 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGELA---- 133 R++GN++ + + A ++ + E EQ ++Q + P+ + I + YA A ++A Sbjct: 331 KRRKGNVMLIDTKA----SMDKMEEEQLKSQQTIEKLEPIRSDLIQINYAKAADIAVLIK 386 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 LLS +G ++VD RTN + ++D T + + + + Q+D+PV QV + A IV + + Sbjct: 387 DKQNSLLSDRGKISVDARTNTIWIQDTGTKIEEVRELIKQLDIPVKQVLIEARIVEVTKD 446 Query: 194 SLRELGVKWTLADAQHAGG-----------------VGQVTTLGSDLSVATAT----THV 232 +++G++W ++ H G V L DL+ A T V Sbjct: 447 FSQDIGIRWGVSRPTHLSGTLEGANELARGTAPANVVPLERRLNLDLAAAPLTGATPASV 506 Query: 233 GFNIGRINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 G + ++N LLDLELSALE + + ++I+SPRL+ ++ Q A I+ G EIPYQ ++ SG Sbjct: 507 GIALAKLNDNILLDLELSALESEGRAELISSPRLITTNQQAAVIESGEEIPYQEATS-SG 565 Query: 292 ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 AT+V FK+AVL ++VTP + G+I + L I+Q+ P Q V AI +EI+T V Sbjct: 566 ATAVAFKKAVLSLKVTPQITPDGKILMDLQINQDTPS---PQTFLGVPAIITKEIQTNVL 622 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 V +G+T+ LGGI+ + + +P G++P G LF + + EL++FITPR++++ Sbjct: 623 VNNGQTIVLGGIYKQDKNKVINRIPFFGELPVVGILFSNRQITLKNEELLIFITPRIITN 682 >UniRef50_B8GPV1 Type IV pilus secretin PilQ n=5 Tax=Chromatiales RepID=B8GPV1_THISH Length = 711 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 144/416 (34%), Positives = 237/416 (56%), Gaps = 36/416 (8%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++++L D+ V VLQ +A+ LN+VVS V+G ++L L +VPW QAL +++S GL Sbjct: 297 ERLSLNFQDIEVRSVLQLIADFTDLNVVVSDSVTGNITLRLRNVPWDQALDIILRSKGLG 356 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAE-QARAQAN--LPLENRSITLQYADAGELAKA--- 135 R+ GN++ V A AR++ E ++R Q PL I + YA A ++A Sbjct: 357 MREAGNVIFV---APTEEIAAREKLEMESRKQVEELAPLRAEFIQVNYARADDVASIIRS 413 Query: 136 -GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 LS +GS+TVD RTN LL++D + L+ + + + ++D+PV QV + IV ++ Sbjct: 414 DRTTFLSDRGSLTVDNRTNTLLVQDTEAKLADIRRLIDRLDIPVQQVLIETRIVIASDDF 473 Query: 195 LRELGVKWTLADAQHAGGVGQVTT----------LGSDLS-----------VATATTHVG 233 R+LG ++ + G TT G +LS ++ + + Sbjct: 474 ARDLGARFGVTGVGQTGRTQTFTTGNLSGTTEMIRGDELSLLNRLNTNLPVISPSAGSIA 533 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 +I R + LLDLE+SAL+ + + +II+SPR++ ++ Q A I+QG IPYQ ++ SGAT Sbjct: 534 LSILRPDV-LLDLEISALQVEGRGEIISSPRVITANGQTARIQQGERIPYQEATS-SGAT 591 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 +V+F EAVL EVTP + G I L + ++++ PG ++ Q +I+ +E+ETQV V+ Sbjct: 592 AVQFIEAVLATEVTPQITPNGNIILNIRVNKDNPGTLVVQG---TPSIETREVETQVFVR 648 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +GET+ LGG++ + + VP GD+P LFR GK + EL++F+TP+++ Sbjct: 649 NGETVVLGGVYEIDSLETLEKVPFFGDLPGIRHLFRRTGKSTRKAELLIFVTPKVI 704 >UniRef50_A6GPK2 Pili assembly protein PilQ n=1 Tax=Limnobacter sp. MED105 RepID=A6GPK2_9BURK Length = 681 Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 143/401 (35%), Positives = 235/401 (58%), Gaps = 17/401 (4%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + +TL D + V+Q A+ K+NLV+S V G V++ L DVPW QAL V++S GL+ Sbjct: 288 RPITLDFKDADIRTVMQVFADFTKMNLVLSDSVQGKVTVFLKDVPWDQALDIVMRSKGLV 347 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQY---ADAGELAKAGE 137 + Q GN+L V + N+ + + RAQ + PL ++ + Y AD L K+ + Sbjct: 348 SSQAGNVLLVSTPTDVTND--QFQTANRRAQDEMEPLVSKVFQVSYQKTADLVALIKSED 405 Query: 138 -KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 KLLSA+G++ D+RT+++ ++D T L + V +D PV QV + A +V + R Sbjct: 406 SKLLSARGTLISDERTSQIFVQDTPTRLERISMIVNGLDKPVKQVMIEARVVLADTSVSR 465 Query: 197 ELGVKWTLADAQHAGGVGQV-TTLGSDLSVATAT---THVGFNIGRING-RLLDLELSAL 251 +LG++ A+ G +V GS V T T++G+ + N RL++L+L AL Sbjct: 466 DLGIRLRALSARADPGFDEVGDQFGSGNFVNTGVENATNLGYTLFNANSTRLINLQLRAL 525 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVL 311 E + ++ +++PR++ S+ +PA I+QG+EIPYQ+++ SGAT+ EFKEA L + VTP + Sbjct: 526 ELENKVRTVSNPRVITSNKEPALIEQGTEIPYQIATS-SGATATEFKEANLKLAVTPQIA 584 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 G + L + ++++ G ++ ++G AID + ++T+V V G T+ LGGIF + Sbjct: 585 PDGTVLLDVDVAKDSIG--IETSNGP--AIDTRRVKTKVLVSDGGTVVLGGIFEEDDNVL 640 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 D P LGDIP G LFR + R EL++F+TP +++S+ Sbjct: 641 NDKTPFLGDIPGLGVLFRGKNESRRRAELLIFLTPVVLTSQ 681 >UniRef50_Q0VMB7 Fimbrial assembly protein pilQ n=3 Tax=Gammaproteobacteria RepID=Q0VMB7_ALCBS Length = 723 Score = 227 bits (579), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 152/453 (33%), Positives = 236/453 (52%), Gaps = 77/453 (16%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L D+ V VLQ +A+ LNLV S V G ++L L +VPW QAL+ ++K+ GL Sbjct: 276 EKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVDGRITLRLQNVPWDQALELILKTKGLD 335 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAE---QARAQANLPLENRSITLQYADAGELAK---- 134 RQ GN+L V A + AR++ E Q + +A PL I + YA+A EL + Sbjct: 336 KRQVGNVLLV---APADEIAAREQLELESQKKIEALAPLRTEYININYANASELKELISN 392 Query: 135 ---AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 GE L+S +GS+ VD+RTN L+++D + L + + + Q+D+PV QV + A +V Sbjct: 393 AGGKGEALVSGRGSVVVDQRTNTLIVQDTQAKLQEIRELIDQLDIPVQQVLIEARVVVAT 452 Query: 192 EKSLRELGVKW---------TLADAQHAGGVGQVTTLGS--------------------- 221 E GV+W L D + G G++ +L + Sbjct: 453 NDVTDEFGVRWGGLGFDTESMLEDGRTFGVSGRLQSLRNLHQTNIDATIAYPDTVGGHPG 512 Query: 222 ----------------------DLSVATATTH---VGFNIGRINGRLLDLELSALEQKQQ 256 DL V +A+ VGF + L++LELSALE + Sbjct: 513 DVEFGPDDFQFQEAENDDDLIVDLGVDSASASRFAVGFT--SLASGLIELELSALEAEGH 570 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRI 316 +++A+P++L + QPA I G ++P+++++ SGATS++F EA L +EVTP + G I Sbjct: 571 GELVATPKVLTADQQPAVIASGQQVPFEIAT-SSGATSIDFVEAELRLEVTPHITPDGNI 629 Query: 317 RLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP 376 + L ++ + +DG AI+ +ET V V GET+ LGGIF ++ + P Sbjct: 630 IMMLKVNNDS-----FSSDGSA-AINTNRVETSVLVNDGETVVLGGIFQQEKINSVTKTP 683 Query: 377 LLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 LGD+PW G LFR D ++EL++FITPRL+ Sbjct: 684 FLGDLPWIGALFRKTVNRDNKQELLIFITPRLM 716 >UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter RepID=B9M3I8_GEOSF Length = 911 Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 132/400 (33%), Positives = 214/400 (53%), Gaps = 19/400 (4%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +KVTL D + ++ Q +AE LN +++ DV+GT+S+ L +VPW QAL ++ + GL Sbjct: 520 RKVTLEFSDADIRKIFQLIAEVSNLNFLIADDVTGTISIKLVNVPWDQALDVILDTKGLG 579 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 +EGNI+ + A + + A + + + L + YA ++A L S Sbjct: 580 MLKEGNIVQIKPKAKMQSQADEEMATKKARERGMELRTEIFDVNYAAVTDIATQFGTLKS 639 Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVK 201 +G ++ D RTNR++++D TA+ + + +D P QV + A IV + +R+LGV+ Sbjct: 640 DRGIISTDARTNRVIVKDITTAIEDMRMLLKSLDTPEKQVMIEARIVEASTSFVRDLGVQ 699 Query: 202 WTLADAQHAGGVGQVTTLGSDLS--VATATTH--------VGFNIGRINGRL-LDLELSA 250 W + + V ++ L + VA A T VG + G++ + LD+ LSA Sbjct: 700 WGIHYIDGSASVAGISRLDTGFGGQVAIAPTSGTSGPGAAVGMSFGKLASNIQLDMRLSA 759 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTV 310 Q+ I+++PR++ + +PA I QG+ IPYQ +S E T EF EA L +EVTP + Sbjct: 760 AVTADQIKIMSTPRVVTLNNKPAKISQGASIPYQTTSAE--GTKTEFVEAALTLEVTPHI 817 Query: 311 LQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKS 370 G I +K+ S N G G I+K+E T++ +K+GET +GGI+ + Sbjct: 818 TSDGSIGMKIKASNNSAGT------GSPPPINKKEATTELLIKNGETTVIGGIYVDSDTE 871 Query: 371 GQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 VP L DIP G LF+ + K + EL++FITP++VS Sbjct: 872 SDKGVPFLQDIPLLGWLFKSNTKNKSKNELLIFITPKIVS 911 >UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisseriaceae RepID=C0DV38_EIKCO Length = 707 Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 151/422 (35%), Positives = 235/422 (55%), Gaps = 39/422 (9%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++V+L DV V +LQ LA++ +N+V S VSG ++L L DVPW QAL V++S GL Sbjct: 288 KRVSLDFQDVDVRTILQILAKESNMNIVASDSVSGKMTLSLKDVPWDQALDLVMQSRGLE 347 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELAK------ 134 +R+ GNI+ V A + I + E A+ L PL +R+ L+Y D E K Sbjct: 348 SRRNGNIIRVAP-AEEFRKIDVETLENAKRIEELGPLVSRTFQLKYKDVNEFRKILNISD 406 Query: 135 ---------AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 LLS++GS +D TN L+++DN+ + E+ + Q+D+P QV + A Sbjct: 407 TGSSGGSGNNNNTLLSSRGSAVIDPATNTLIIKDNQNVIKEFERLIEQLDVPARQVMIEA 466 Query: 186 HIVTINEKSLRELGVKW----TLADAQHAGGVGQVTTLGSDLSVA--------TATTHVG 233 IV N+ R LGVK+ T + G+G G+ S+A +AT+ + Sbjct: 467 RIVEANDGFSRALGVKFGYNKTSGSTRIGSGLGSGGANGNTFSIAPNVNLPAISATSSIT 526 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 + ++ L LEL+A++++ + II+SPR+L + A+IK G EIPYQ + SGAT Sbjct: 527 I-VRALSSGALGLELTAMQEQNRGKIISSPRVLTQDRKEATIKAGREIPYQ-EASSSGAT 584 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL---AIDKQEIETQV 350 S FKEAVLG+ VTP + G + + + ++++ + + VL I+ +E+ T+ Sbjct: 585 STSFKEAVLGLTVTPQITPDGNVIMDIKLNKDSVDE-----NCSVLGTPCINTKELVTRA 639 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 V+ G T+ LGGI+ +N + Q VPLLGDIP G LFR + + + EL++FITPR++ Sbjct: 640 MVEDGGTIILGGIYEEENSNSQYKVPLLGDIPVVGNLFRGTRRNNSKNELLIFITPRIMG 699 Query: 411 SE 412 SE Sbjct: 700 SE 701 >UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas intermedia K12 RepID=C7HZW7_THIIN Length = 752 Score = 224 bits (571), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 157/474 (33%), Positives = 252/474 (53%), Gaps = 87/474 (18%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 PG QK++L ++ V +LQ A+ LN+VVS V+G ++L L DVPW QALQ Sbjct: 285 PGFHG---QKLSLNFQNIDVRSLLQVFADFTHLNVVVSDSVTGNLTLRLKDVPWDQALQV 341 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEA--EQARAQANL-PLENRSITLQYADAG 130 ++++ GL R+EGN+L IA ++ +AR++A E ++ + L P+++ + L Y A Sbjct: 342 ILRAKGLGERKEGNVLW---IAPRDEILAREKADLEAKKSLSALEPVKSETFQLNYQKAA 398 Query: 131 EL----------AKAG--------------------EKLLSAKGSMTVDKRTNRLLLRDN 160 + A++G ++LS +G++ D RTN++ + D Sbjct: 399 TVVAMLTGAAGGAQSGTTATPSPVLLPGLSSSAAPTSRILSPRGTVLADPRTNQIFVTDI 458 Query: 161 KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHA-GGV------ 213 + L + Q +A++D PV QV + A IV +++ R LGVK DA+ GGV Sbjct: 459 PSKLEEVAQLIAKIDKPVRQVMIEARIVEASDQFGRSLGVKLGFLDARGIQGGVPGTNLV 518 Query: 214 -GQVTTLGSD-LSVATATTHVG-------------------------------FNIGRIN 240 G T+ D L VA T G I N Sbjct: 519 GGTYGTVSGDYLGVANQTNQPGSSAATLADSQFVNLPAFGLAGSLLAGAAPSSLGISLFN 578 Query: 241 G---RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 R ++LELSA+E + II+SPR++ + L A+I+QG+EIPYQ ++ SGAT+V F Sbjct: 579 AAANRFINLELSAMEADGKGKIISSPRVITADLSKATIEQGTEIPYQQAT-SSGATAVTF 637 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 K+AVL ++VTP + G + + + I ++ PG + V +I+ + TQV+V++G T Sbjct: 638 KKAVLSLDVTPQITPDGNVIMNVEIHKDSPGA----STAGVPSINTNTVTTQVQVENGGT 693 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + LGGI+T + ++ D VPLLGDIP G LF+++ K + EL+VF+TP++V++ Sbjct: 694 VVLGGIYTSQEQNQTDKVPLLGDIPVLGNLFKNNSKMYNKNELMVFLTPKIVTN 747 >UniRef50_C2LEH3 Competence protein E n=3 Tax=Proteus RepID=C2LEH3_PROMI Length = 371 Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 142/332 (42%), Positives = 193/332 (58%), Gaps = 25/332 (7%) Query: 101 IARQEAEQARAQANLPLENRSITLQYAD----AGELAKAGEKLLSAKGSMTVDKRTNRLL 156 I + + + N L +R LQYAD A +L G LLS G + +DK +N L Sbjct: 42 IDKTDNSETLQHQNSTLHHRIYPLQYADVTTVAQQLTNYGISLLSDHGRIAIDKDSNSLS 101 Query: 157 LRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG--GVG 214 + D + A + + W+ + P QV ++AHI++ ++ +L ELG +W L + + A G Sbjct: 102 IIDTEKAHTEISDWLKIKETPQQQVHITAHIISSSQDALNELGTQWGLLNMKSANLEGTS 161 Query: 215 QVTTLGSDLSVATATT-----------------HVGFNIGRINGRLLDLELSALEQKQQL 257 TT +++ A T ++ FNI RIN RLL+LELSALEQ++QL Sbjct: 162 NNTTTPHNIASAPLTAPSLAALALHQKTKNPLHYIAFNIARINSRLLELELSALEQEKQL 221 Query: 258 DIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIR 317 IIASPRL A+H + ASIKQG+EIPY S ++ VEFKEAVLGMEVTP + + +IR Sbjct: 222 AIIASPRLTAAHEKTASIKQGTEIPY--VSRDNDTIRVEFKEAVLGMEVTPIIQRSNKIR 279 Query: 318 LKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 L L ISQN PG L Q E L+IDKQEI T+V + GETL LGGIF +K + +P Sbjct: 280 LLLKISQNTPGIALVQGGSEHLSIDKQEIMTEVTIHDGETLMLGGIFQQKQQQHAAKIPF 339 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 L +P G LF H + R ELV+FITP+L+ Sbjct: 340 LSSLPLLGILFSHKRDQHSRHELVIFITPKLI 371 >UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=Acinetobacter RepID=Q6F7E3_ACIAD Length = 723 Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 138/447 (30%), Positives = 239/447 (53%), Gaps = 65/447 (14%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L D+ V +VLQ LA+ +N+V + V G ++LHL DVPW QAL ++K+ L Sbjct: 277 KKISLDFQDIEVRRVLQLLADFTNINMVTADSVQGNITLHLKDVPWDQALDIILKTKNLD 336 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQAN----LPLENRSITLQYADAGELAK--- 134 R+ GN++ + ++ + + E ++A+A A PL+ I L+YA A ++ K Sbjct: 337 KRRNGNVIWIAPVS----ELIKSEEDEAKAIAQSTKLAPLQTEYILLKYAKAADIEKLIT 392 Query: 135 ----AGEK-------------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 +G LLS +G++++D RTN L++ D + + + + Sbjct: 393 QGRNSGTSNSNTNGSATVEPLGDSVGTLLSPRGTISLDPRTNTLIINDTSQKIDQIRKMI 452 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKW--------------------TLADAQHAG 211 +D+PV QV + A IV +E+GVKW TL + ++ Sbjct: 453 DLLDIPVKQVMIEARIVRATTSFSKEMGVKWGILSQGINQNSNLLVGGSETTLWNLRNPD 512 Query: 212 GVGQVT-----TLGSDLSVAT-ATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRL 265 G T L DL V T + + F + ++ +LDLELSAL+ ++I++P++ Sbjct: 513 SNGTYTIERPDNLNVDLGVTTTGASSIAFGLISLSDFMLDLELSALQADGYGEVISTPKV 572 Query: 266 LASHLQPASIKQGSEIPYQ-VSSGESGAT-SVEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 +++ Q A + G E+PYQ ++ +G+T + FKEA+L +EVTP + G+I ++L+I+ Sbjct: 573 MSADKQKAKVATGVEVPYQSTTNSAAGSTATTSFKEALLSLEVTPNITPDGKILMELNIA 632 Query: 324 QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPW 383 + Q +GE + ++K I T V V +GET+ LGG+F + + VP LGD+P+ Sbjct: 633 NDSINSYAQ--NGEAI-LNKNTINTNVLVNNGETVVLGGVFEQTTNNAVTKVPFLGDLPY 689 Query: 384 FGQLFRHDGKEDERRELVVFITPRLVS 410 G+LF+ K + + EL++F+TPR+V+ Sbjct: 690 VGRLFKKTAKSEAKNELLIFVTPRIVN 716 >UniRef50_Q7MH82 Type IV pilus (Tfp) assembly protein PilQ n=9 Tax=Vibrionaceae RepID=Q7MH82_VIBVY Length = 594 Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 155/433 (35%), Positives = 242/433 (55%), Gaps = 51/433 (11%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 +++ D+PV VLQ +A+ NLVVS V+G V+L L VPW+Q L +++ GL R Sbjct: 164 ISINFQDIPVRNVLQLIADYNGFNLVVSDSVTGNVTLRLDGVPWQQVLDIILQVKGLDKR 223 Query: 84 QEGNILSVHSIAWQNNNIAR--QEAEQARAQANL-PLENRSITLQYADAGELA-----KA 135 EGN++ IA Q+ R Q+ E+ R L L++ I + +A A ++A K Sbjct: 224 VEGNVVL---IAPQDELDLREKQQLEKERLAEELGSLKSEIIKVNFAKASDIAEMINGKE 280 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 +LS +GS+ +D+RTN LLLR+ + + + + +D+PV QV++ A IVT+NE +L Sbjct: 281 SVSMLSERGSVAIDERTNSLLLRELPENIEVIREIINSLDIPVKQVQIEARIVTVNEGNL 340 Query: 196 RELGVKWTLADAQHAGGVG-----QVTTLG----------------------------SD 222 ELGV+W + VG + T+G Sbjct: 341 DELGVRWGFTSINGSTTVGGSIENNLATIGLYNAGSGSGSGDSGSGGSGGEGGSASIDDF 400 Query: 223 LSVATATT-----HVGFNIGRINGRLLDLELSALEQKQ-QLDIIASPRLLASHLQPASIK 276 L+V A T + F + ++ LL + Q++ + +II+SPRL+ ++ +PA I+ Sbjct: 401 LNVNLAATSANASSIAFQVAKLGSDLLLDLELSALQRESKAEIISSPRLITTNKKPAYIE 460 Query: 277 QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG 336 QG+EIPY + S SGAT+V FK+AVL ++VTP + R+ L L ++Q+ PG++++ G Sbjct: 461 QGTEIPY-LESSSSGATTVSFKKAVLSLKVTPQITPDNRLVLDLSVTQDRPGEIVKTGTG 519 Query: 337 EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDE 396 E +AID Q I TQV V +GET+ LGGIF + D VPLLGD+P G LFR + Sbjct: 520 EAVAIDTQRIGTQVLVNNGETVVLGGIFQHSITNTTDKVPLLGDLPLLGALFRRSYENVG 579 Query: 397 RRELVVFITPRLV 409 +REL++F+TP+++ Sbjct: 580 KRELLIFVTPKVI 592 >UniRef50_Q60BY4 Fimbrial assembly protein PilQ n=1 Tax=Methylococcus capsulatus RepID=Q60BY4_METCA Length = 729 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 143/434 (32%), Positives = 229/434 (52%), Gaps = 50/434 (11%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++++L D+PV VLQ LA+ LN+V S V G+V+L L +VPW +AL V+K+ GL Sbjct: 293 ERLSLNFQDIPVRNVLQILADFTNLNIVASDSVQGSVTLRLNEVPWDEALDLVLKAKGLG 352 Query: 82 TRQEG--NILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELAK---- 134 RQE N++ V + + N R E E + +L PL I + Y A ++ K Sbjct: 353 KRQEANSNVIRVAPLD-EINRSERDELEALKVVEDLEPLRTEIIQINYTKADDIKKVIMG 411 Query: 135 ----------------------------AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSA 166 + +LS++G++T D RTN+L+++D L Sbjct: 412 TTEKAEKAITRPEALTGGPGVTSTEAYDVTQSILSSRGNVTTDPRTNQLIVQDTPRNLER 471 Query: 167 LEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW-----TLADAQHAGGVGQVTTLGS 221 + V Q+D PV QV + + +V N LRELG K L A+ G + LG Sbjct: 472 IRDLVRQLDKPVRQVMIESRVVIANVDFLRELGAKLDFRPKNLTAAERLNPTGSMADLGV 531 Query: 222 DLSVATATTHVGF--NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 DL+ T + G + + LLDLELSA +++ + +I+A+PR+L + A I QG Sbjct: 532 DLAKLTTLSPYGTAQYVVSMGDYLLDLELSAAQKEGRGEIVANPRVLTADQSKAKIMQGV 591 Query: 280 EIPYQVSSGESGA----TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 E+PYQ++ +G +V FK AVL ++VTP + I + L + ++ G++ + Sbjct: 592 ELPYQITQQGTGGGIPVQNVAFKPAVLELDVTPHITPDDHILMDLMVKKDDKGELAPNGN 651 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 AI+K+EI+T +V +GET+ LGG++ ++ D VP GD+P G +FR + ED Sbjct: 652 ---FAIEKREIDTVAQVANGETVVLGGVYEGTRRNNTDKVPFFGDLPGIGFMFRRNAVED 708 Query: 396 ERRELVVFITPRLV 409 ++EL++FITP++V Sbjct: 709 RKKELLIFITPKIV 722 >UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legionella longbeachae D-4968 RepID=D1RGV5_LEGLO Length = 701 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 140/416 (33%), Positives = 231/416 (55%), Gaps = 29/416 (6%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++++L ++ + VLQ LA+ +N+V S V G ++L L ++PW QAL ++K+ GL Sbjct: 271 RRISLNFQNISIRSVLQLLADFTGINIVASDRVQGNITLRLNNIPWDQALDIILKTQGLA 330 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA----KAGE 137 RQ GN++ + + N+ +Q Q + Q P+ + I + YA A +LA Sbjct: 331 QRQNGNVMVIDTQKSFNDMEEQQLKSQHKIQRLEPVRSELIQINYAKATDLAILIKDRQN 390 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 LLS KG ++VD RTN + ++D+ + + + + + ++D+PV QV + A IV + + ++ Sbjct: 391 SLLSDKGKVSVDTRTNTIWIQDSGSRVDEVRKLIKELDVPVKQVLIEARIVEVTKDFAQD 450 Query: 198 LGVKWTLADAQHAGGV-------------GQVTT----LGSDLSVATAT----THVGFNI 236 LG++W ++ QH G VT L DL A T VG + Sbjct: 451 LGIRWGVSKPQHLSGTLAGANQLAQGVAPADVTPFTDRLNLDLVAAPLTKANPATVGIAL 510 Query: 237 GRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSV 295 ++ + LLDLELSALE + ++I+SPRL+ ++ QPA I G EIPYQ S+ SGAT+V Sbjct: 511 AQLGDNILLDLELSALESEGLAELISSPRLITANQQPALIDSGQEIPYQQSTS-SGATAV 569 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 FK+AVL ++V P + +I + L I+Q++ + Q V AI +EI+T V V +G Sbjct: 570 AFKKAVLSLKVIPQITPDNKILMDLKINQDL--ALPNQTYNGVPAIATKEIQTNVLVSNG 627 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +T+ LGGI+ + VP G +P G LF++ EL++FITP+++++ Sbjct: 628 QTIVLGGIYQQDKSKTITRVPFFGQLPVVGNLFKNTQIGVHNDELLIFITPKIITN 683 >UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax=Methylophilaceae RepID=Q1GYG5_METFK Length = 723 Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 146/459 (31%), Positives = 241/459 (52%), Gaps = 74/459 (16%) Query: 16 VQAAKP----QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQAL 71 VQ +KP +K++L ++ V VLQ +A+ LN+V S V+G ++L L DVPW QAL Sbjct: 267 VQGSKPGYAGEKLSLNFQNIDVRSVLQVIADFTGLNIVTSDTVTGNLTLRLKDVPWDQAL 326 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYA 127 ++ S GL R+ GN++ V ++ +A +E A + P+ TL+Y Sbjct: 327 DIIMSSKGLTQRKTGNVIWVAP----SDEVAAKEKLLLEASQQIEELEPMRTEVFTLRYQ 382 Query: 128 DAGE----LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 A ++ + +K+LS +GS VD RTN + ++D L ++ + ++D+PV QV + Sbjct: 383 KAENFKNIISDSKQKILSKRGSAVVDARTNTVFVQDTAKHLEEVQSIINKIDIPVKQVMI 442 Query: 184 SAHIVTINEKSLRELGVKWTLADAQHAGGV--GQVTTLGS-------------------- 221 + +V +EK R LG ++ + Q +G G TLG+ Sbjct: 443 ESRLVIADEKFGRSLGARFGVQKQQASGDTRYGSSGTLGNTITQRTVDPTTGVITETIAN 502 Query: 222 ------------------------------DLSVATATTHVGFNIGRI-NGRLLDLELSA 250 +L VA A + F++ R+ G LL+LELSA Sbjct: 503 RVGSSTLATTSIPGTVGVGVSPDGAQDLNVNLPVANAFGNFAFSLFRLPAGFLLNLELSA 562 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTV 310 LE Q+ I++SPR+ ++ Q A I+QG++IP+Q ++ SGAT+V+FK A L +EVTP + Sbjct: 563 LETDQRGKIVSSPRVTTANQQKAIIEQGTQIPFQQAT-SSGATAVQFKNASLSLEVTPQI 621 Query: 311 LQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKS 370 +I + L + ++ G V V +ID Q ++TQV V +GET LGGI+ + ++ Sbjct: 622 TPDEKIIMDLEVKKDKVGVVFNN----VPSIDTQRVQTQVLVANGETAVLGGIYEQTERN 677 Query: 371 GQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 D VP GD+P+ G +F+ K+ ++ EL++FITP+++ Sbjct: 678 DVDKVPFFGDLPFLGNVFKRRVKQSDKTELLIFITPKVM 716 >UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=Chromobacterium group RepID=Q7NZU2_CHRVO Length = 697 Score = 221 bits (562), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 152/436 (34%), Positives = 240/436 (55%), Gaps = 48/436 (11%) Query: 15 GVQAAKPQ----KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 G A KPQ K++L ++ V VLQ +AE LN+V S V+G ++L L DVPW QA Sbjct: 263 GGAAGKPQYKGDKLSLNFQNIEVRTVLQVIAEFTGLNVVTSDSVTGNITLRLKDVPWDQA 322 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIAR-QEAEQARAQ-ANL-PLENRSITLQYA 127 L +++S GL R+ GNI+ IA ++ +AR ++ ++AR Q A L PL + + L+Y Sbjct: 323 LDLILQSKGLDQRRNGNIIQ---IAPRDELLARDKQVQEARQQLATLEPLRSETFVLRYR 379 Query: 128 DAGELAKA---------GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 A + K E LLS +GS+ +D +TN L++ D TA+ + + + D+PV Sbjct: 380 SAEDFKKVLDGDNNSGKKESLLSERGSVLIDPKTNTLIVNDIGTAIDKIRDVITKTDIPV 439 Query: 179 GQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVG----------------------QV 216 QV + A IV + R+LG+K T G + Q Sbjct: 440 KQVLIEARIVEATDNWERDLGIKLTYDRMDPKGIISGNPLGTNVNNVTNLNNNQPYVIQT 499 Query: 217 TTLGSDLSVAT--ATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 T G +L +AT T +N+G + +L LEL A++ + + II+SPR++ + Q AS Sbjct: 500 TPAGVNLPIATPYGTLSALYNVG--HSVILGLELQAMQAEDKGRIISSPRVMTADRQEAS 557 Query: 275 IKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 I+QG+EIPYQ +S SGATSV FK+AVL + V P + + + + ++++ ++ Sbjct: 558 IEQGTEIPYQEAS-SSGATSVSFKKAVLRLNVKPQITPDNHVIMDITVNKDSAN--FEKT 614 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 ++ ++I TQV V++G T+ LGGI+ ++ + VP LGDIP G LFR K Sbjct: 615 VNGTPSLSTEKIITQVLVENGGTVVLGGIYQQQLNDVINKVPFLGDIPLLGALFRSSQKI 674 Query: 395 DERRELVVFITPRLVS 410 D+R EL++FITP++++ Sbjct: 675 DKRSELLIFITPKVIN 690 >UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L240_HALNC Length = 729 Score = 220 bits (561), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 141/443 (31%), Positives = 238/443 (53%), Gaps = 55/443 (12%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +++TL D+ + +LQ +A+ N+VVS DV G++SL L +VPW QAL ++ + GL Sbjct: 283 ERLTLKFQDIQIRPLLQLIADFTGNNIVVSDDVKGSISLRLENVPWDQALDLILTTKGLS 342 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAE-QARAQAN--LPLENRSITLQYADAGELAK---- 134 R+ GN++ V A + +AR +AE +AR Q+ PL I + YA A ++ K Sbjct: 343 MRKNGNVMYVAPTA---DIVARDKAEIEARQQSQQLAPLSTDIIQINYAKADDIYKLLES 399 Query: 135 ---------------AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 ++ +S +GS+TVD R+N L++ D +AL + + ++D PV Sbjct: 400 ASKTGKTSADGKGGDTAQRFISDRGSVTVDPRSNSLIVTDTASALDRIRDLIHKLDKPVK 459 Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAG----GVGQVTTL---GSDLSVATATTHV 232 QV + IV + R+LGV+W + + G G+G L G+ L A A+T Sbjct: 460 QVLIETRIVIATDNFARQLGVRWGVQAGFNRGNSTFGLGSTAPLVASGTSLPTAGASTGT 519 Query: 233 ---------------GFNIGRI------NGRLLDLELSALEQKQQLDIIASPRLLASHLQ 271 G G + + LLDLELSAL+ + +I++SP+++ ++ Sbjct: 520 VGTAPTDWMVNTPISGTPAGSLGLAILGSNVLLDLELSALQSEGTGEIVSSPKVITTNGH 579 Query: 272 PASIKQGSEIPYQVS--SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQ 329 A I QG+EIPY + +G + +V FK+AVL EVTP + I + + + ++ P Sbjct: 580 TALISQGTEIPYIATQTAGGVASNTVSFKKAVLSTEVTPQITPNNNIIMDIDVKKDEPDY 639 Query: 330 VLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFR 389 I+ +E++T+VEVK+GET+ LGGI+ +N + + VP GD+P G LF+ Sbjct: 640 TNLLPGTTNPPINTREVKTKVEVKNGETVVLGGIYQFENNNSINKVPFFGDLPGIGNLFK 699 Query: 390 HDGKEDERRELVVFITPRLVSSE 412 + +++R EL++F+TP++++S+ Sbjct: 700 NKEVKNQRLELLIFVTPKIINSD 722 >UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammaproteobacteria RepID=PILQ_PSEAE Length = 714 Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 148/436 (33%), Positives = 233/436 (53%), Gaps = 54/436 (12%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L D+ V VLQ +A+ LNLV S V G ++L L +VPW QAL V+K+ GL Sbjct: 282 EKLSLNFQDIDVRSVLQLIADFTDLNLVASDTVQGNITLRLQNVPWDQALDLVLKTKGLD 341 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGELAKAGE 137 R+ GN+L V + IA +E ++ AQ + PL I + YA A ++AK + Sbjct: 342 KRKLGNVLLVAPA----DEIAARERQELEAQKQIAELAPLRRELIQVNYAKAADIAKLFQ 397 Query: 138 KLLS---------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 + S +GS+TVD RTN ++ + L L + V+Q+D+PV QV + A IV Sbjct: 398 SVTSDGGQEGKEGGRGSITVDDRTNSIIAYQPQERLDELRRIVSQLDIPVRQVMIEARIV 457 Query: 189 TINEKSLRELGVKWTLA--------------------DAQHAGGVGQVTTLGS------- 221 N + LGV+W A D + G + T + Sbjct: 458 EANVGYDKSLGVRWGGAYHKGNWSGYGKDGNIGIKDEDGMNCGPIAGSCTFPTTGTSKSP 517 Query: 222 ----DLSVATATTHVGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIK 276 DL AT+ +G IG I + LDL+LSA+E+ +I++ P+++ S + A I Sbjct: 518 SPFVDLGAKDATSGIG--IGFITDNIILDLQLSAMEKTGNGEIVSQPKVVTSDKETAKIL 575 Query: 277 QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG 336 +GSE+PYQ + SGATS FKEA L +EVTP + RI +++ ++++ P Q Sbjct: 576 KGSEVPYQ-EASSSGATSTSFKEAALSLEVTPQITPDNRIIVEVKVTKDAPD--YQNMLN 632 Query: 337 EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDE 396 V I+K E+ ++ V GET+ +GG+F+ + + VP LG++P+ G+LFR D D Sbjct: 633 GVPPINKNEVNAKILVNDGETIVIGGVFSNEQSKSVEKVPFLGELPYLGRLFRRDTVTDR 692 Query: 397 RRELVVFITPRLVSSE 412 + EL+VF+TPR+++++ Sbjct: 693 KNELLVFLTPRIMNNQ 708 >UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadaceae RepID=B9MDF0_DIAST Length = 696 Score = 217 bits (552), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 137/421 (32%), Positives = 227/421 (53%), Gaps = 38/421 (9%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L ++ V +LQ +A+ N+V S V+G ++L L DVPW QALQ ++ + GL Sbjct: 276 EKLSLNFQNIEVRSLLQVIADFTNFNIVTSDTVTGALTLRLKDVPWDQALQIIMDAKGLG 335 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELAK------ 134 R+ G +L + + + +++ E A A L PL ++ L YA A ++ Sbjct: 336 MRKSGTVLWIAP-KDEIDERTKKDYEAALAIQKLEPLRTQAFQLNYAKAADMVTQLTMSS 394 Query: 135 --------AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 + LS +GS + RTN+L + D L + Q +A +D+PV QV + A Sbjct: 395 QGGSSTSGYSNRFLSDRGSAISEPRTNQLFVTDTSAKLEEVRQLLATLDVPVRQVMIEAR 454 Query: 187 IVTINEKSLRELGVKW----------------TLADAQHAGGVGQVTTLGSDLSVATATT 230 IV + R LGV+ +A G+ +L + LS + Sbjct: 455 IVEARDTFGRSLGVRLGGGSRTGGSAVGGTYDNVAGPTGGSGMSPFVSLPASLSGVSTVG 514 Query: 231 HVGFNIGRING-RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 +I N R L LELSA+E Q I++SPRL+ + A I+QG+E PY V++ Sbjct: 515 SFALSIFNSNASRFLSLELSAMEADGQGKIVSSPRLITADQTKALIEQGTEYPYSVTA-P 573 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 +GAT++ FK+AVL +EVTP + +G I L L ++++ G+ Q +AID + I+TQ Sbjct: 574 NGATTIAFKKAVLKLEVTPQITPEGNIILDLDVNKDSRGESTTQG----VAIDTKHIKTQ 629 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V +++G T+ +GGIF + + ++ +P+LGD+P G LF++ KE +RE++VFITP+++ Sbjct: 630 VLIENGGTVVIGGIFEMEETNQENKIPVLGDVPVVGNLFKNRTKESTKREMLVFITPKVI 689 Query: 410 S 410 + Sbjct: 690 T 690 >UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter RepID=B5E8I3_GEOBB Length = 946 Score = 217 bits (552), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 131/399 (32%), Positives = 215/399 (53%), Gaps = 19/399 (4%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++VTL D V ++ Q +AE LN +++ DV+GT+S+ L +VPW QAL ++ + GL Sbjct: 555 RRVTLEFSDADVRKIFQLIAEVSNLNFLIADDVTGTISIKLVNVPWDQALDVILDAKGLA 614 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 +EGNI+ + + N + A + A+ + L+ + YA ++A L S Sbjct: 615 MVREGNIVQIKPRSKMQNQADEELAAKKAAERLMELKTMVFEVNYASVNDVAMQFGMLKS 674 Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVK 201 +G +T D+RT+R++++D +TAL+ ++ + +D P QV + A IV R+LGV+ Sbjct: 675 DRGVITKDERTSRVIVKDIQTALNDMKALLKTLDAPEKQVMIEARIVEATSTFTRDLGVQ 734 Query: 202 WTLA----DAQHAG------GVGQVTTLGSDLSVATATTHVGFNIGRINGRL-LDLELSA 250 W L+ A AG G G V + S +G + G++ + LD+ L+A Sbjct: 735 WGLSYRDGSASVAGINSVDTGFGGVVSAAGPGSSGAGGLGLGMSFGKLTSNIKLDMRLAA 794 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTV 310 Q+ II++P+++ + + A I QG IPYQ +S E T EF EA L +EVTP + Sbjct: 795 AATIGQVKIISTPKVVTLNNKAAKISQGQSIPYQTTSAE--GTKTEFVEAALTLEVTPHI 852 Query: 311 LQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKS 370 G + +K+ S N PG G I+K+E T++ V +G+T +GGI+ + Sbjct: 853 TADGSVSMKIKASNNSPGT------GSPPPINKKEATTELVVSNGDTTVIGGIYVDSDTE 906 Query: 371 GQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VP L DIP G LF+ + K+ + EL++FITP++V Sbjct: 907 SDTGVPFLSDIPLLGWLFKSNSKQKTKTELLIFITPKIV 945 >UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein pilQ n=31 Tax=Bacteria RepID=PILQ_NEIG1 Length = 723 Score = 217 bits (552), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 141/422 (33%), Positives = 234/422 (55%), Gaps = 37/422 (8%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L DV + +LQ LA++ +N+V S VSG ++L L DVPW QAL V+++ L Sbjct: 300 RKISLDFQDVEIRTILQILAKESGMNIVASDSVSGKMTLSLKDVPWDQALDLVMQARNLD 359 Query: 82 TRQEGNILSVHSIAWQNNNIARQEA--EQARAQANL-PLENRSITLQYADAGELAK---- 134 RQ+GNI++ IA ++ +A+ +A + + A+L L +++ L+Y + E Sbjct: 360 MRQQGNIVN---IAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRSILRL 416 Query: 135 -----AGEK--LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 G + L+S +GS+ +D TN L++ D ++ + + + ++D+P QV + A I Sbjct: 417 DNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQVMIEARI 476 Query: 188 VTINEKSLRELGVKW------TLADAQHAGGVGQVTTLGS----------DLSVATATTH 231 V + R+LGVK+ L + A G G + G +L VA A Sbjct: 477 VEAADGFSRDLGVKFGATGRKKLKNETSAFGWGVNSGFGGGDKWEAQTKINLPVAAAANS 536 Query: 232 VGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS--SGE 289 + + I+ L+LELSA E + +A+PR+L + + A I+ G EIP+ V+ SG Sbjct: 537 ISL-VRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTVTTASGG 595 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 +T+ E K+AVLG+ VTP + G+I + + I+++ P Q + +L I + + TQ Sbjct: 596 GNSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQC-ASGNNTILCISTKSLNTQ 654 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V++G TL +GGI+ N + VPLLGDIP G LF+ GK+ +RREL++FITPR++ Sbjct: 655 AMVENGGTLIVGGIYEENNGNTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFITPRII 714 Query: 410 SS 411 + Sbjct: 715 DT 716 >UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderiales RepID=A1VK17_POLNA Length = 712 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 142/425 (33%), Positives = 237/425 (55%), Gaps = 45/425 (10%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L ++ + +LQ +A+ N+V S V+G+V+L L DVPW QAL ++++ GL Sbjct: 291 EKLSLNFQNIEIRSLLQVIADFTNFNVVTSDTVTGSVTLRLKDVPWDQALDIILQAKGLG 350 Query: 82 TRQEGNILSV---HSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELA---K 134 R+ GN+L + +A ++ +QE E A NL + +S + YA A E+A Sbjct: 351 MRKTGNVLLIAPKDELAAKD----KQELEARVAIQNLEAVRTQSFQINYAKASEIAVQIS 406 Query: 135 AG------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 AG ++LS +GS+ + RTN+L + D + L ++ ++A++D+ V QV + A IV Sbjct: 407 AGGTGATTARILSNRGSVIAEPRTNQLFVTDIPSRLEQVQNFIAKLDIAVRQVLIEARIV 466 Query: 189 TINEKSLRELGVKW---------------------TLADAQHAGGVGQVTTL-GSDLSVA 226 ++ R LGV+ T A A G + S L VA Sbjct: 467 EASDTFGRSLGVRLGGGTIGAAGALTRGNTNVSLGTNYGATVADTSGNFVSFPASTLGVA 526 Query: 227 TATTHVGFNIGRING-RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 A + +I + R L+LELSALE + I++SPR++ + A I+QG+E PYQ Sbjct: 527 NAASSFAVSIFNASANRFLNLELSALEADGKGKIVSSPRVVTADQTKALIEQGTEFPYQT 586 Query: 286 SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQE 345 ++ SGATS+ F++A L +EVTP + +G I L L ++++ G+ +AID + Sbjct: 587 AT-SSGATSLAFRKANLKLEVTPQITPEGNIILDLDVNKDSRGETTAAG----IAIDTKH 641 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 I+TQV V++G T+ +GGIFT + + + VPLLGD+P+ G LF+ + ++E++VFIT Sbjct: 642 IQTQVLVENGGTVVIGGIFTLEETNNEVKVPLLGDVPYLGNLFKSRERTSRKQEMLVFIT 701 Query: 406 PRLVS 410 P++++ Sbjct: 702 PKMIT 706 >UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7T3_CHRVI Length = 787 Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 147/482 (30%), Positives = 239/482 (49%), Gaps = 98/482 (20%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++++L D+ V VLQ LA+ LNLV S V G ++L L +VPW QAL ++K+ GL Sbjct: 309 ERLSLNFQDIEVRAVLQVLADFTDLNLVASDTVGGNITLRLKNVPWDQALDIILKTKGLA 368 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGELAK--- 134 RQ GN+L V +A QE + + + PL I + YA A ++A Sbjct: 369 MRQNGNVLMVAPA----QELAAQEQLEMESMQKIEELAPLRTEFIQVNYAKAADIAAVLS 424 Query: 135 -AGEK---------------------------------------LLSAKGSMTVDKRTNR 154 AG +LS +GS+T D+RTN Sbjct: 425 GAGRAASNPASPDARQTGTATRRDQVGASGLAQVAAAAGVSDRGILSPRGSLTFDERTNT 484 Query: 155 LLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVG 214 L+++D TAL + + V +D+ V QV + + +V N R+LGV++ ++ + G Sbjct: 485 LIVQDTLTALEEVRRVVNLLDVAVRQVMIESRVVIANNSFARDLGVRFGVSGSMGKVGDN 544 Query: 215 QV-------------------------------TTLGSDLSVATATTH------------ 231 +V +TL D AT T+ Sbjct: 545 EVLIGGGQNGYLAVGDYDSGPFGLNASTGTPYNSTLTDDAGNATLITNLPATTIQDAASG 604 Query: 232 -VGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES 290 + F IG++ L+ LELSA++++ + +II+SPR++ + A+IK GSEIPYQ SG+ Sbjct: 605 SIDFLIGKVGSYLIQLELSAMQREGRGEIISSPRVITADKNKATIKVGSEIPYQEQSGQ- 663 Query: 291 GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQV 350 G TS+ FKEAVL ++VTP + RI + L + ++ P ++ ID + ++T V Sbjct: 664 GNTSIAFKEAVLQLDVTPQITPDDRIIMDLEVRKDRPD--WSRSINNTPPIDTRSVKTNV 721 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + +GET+ LGG+F R+ ++ VP LGD+P G+LF+ + ++D EL++F+TP+++ Sbjct: 722 VIDNGETVVLGGVFEREKTFSKEQVPWLGDVPVLGRLFKQEARQDSNTELLIFVTPKILK 781 Query: 411 SE 412 S+ Sbjct: 782 SD 783 >UniRef50_UPI0001C34749 hypothetical protein PretD1_16510 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34749 Length = 354 Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 111/272 (40%), Positives = 173/272 (63%), Gaps = 6/272 (2%) Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 LLS S+ D TN L+++++ L+ +++W+ D P QV+++AHI++ + +L+EL Sbjct: 88 LLSKNASIHHDITTNSLIIKEDPDRLALIDEWIKHQDKPNKQVQITAHIISSSRTALQEL 147 Query: 199 GVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 G++W + AGG L ++ + FN+ + LL+++L ALE++ L Sbjct: 148 GLEWGMM----AGGNLNANHLYRYNRYSSISGQFAFNVLSLGDGLLEMKLKALEKENLLS 203 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRL 318 IIASPRL+ASH QPASI+QG+EIPY S+ + T V+FK+AVLGM+VTP++++ +I L Sbjct: 204 IIASPRLVASHQQPASIQQGTEIPYVTSNDKK--THVQFKDAVLGMDVTPSIVRDEKIEL 261 Query: 319 KLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLL 378 L IS N P L + LAI+KQEI T V +K+ ETL LGGIF +K + + +P L Sbjct: 262 NLKISHNSPDTALTSSQHHHLAINKQEIATNVTIKNNETLILGGIFQQKQEKTEMGLPFL 321 Query: 379 GDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 IP+ G LF + + ++R L+VFITP+L++ Sbjct: 322 SHIPFLGTLFTNTAEHTDKRVLIVFITPKLIN 353 >UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTT2_9GAMM Length = 721 Score = 213 bits (543), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 145/434 (33%), Positives = 244/434 (56%), Gaps = 51/434 (11%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++++L D+ V VLQ +A+ LN+VVS VSG+++L L +VPW QAL+ ++K+ GL Sbjct: 286 ERLSLNFQDIEVRSVLQLIADFTGLNVVVSDSVSGSLTLRLKNVPWDQALEIILKTKGLD 345 Query: 82 TRQEGNILSVHSIAWQNNNIARQE--AEQARAQAN--LPLENRSITLQYADA-------- 129 R+ GN+L + IA+QE A +A+ Q PL++ + +A A Sbjct: 346 KRKSGNVLLIAPA----EEIAQQEKLALEAKQQVQELAPLQSEFFEVNFAKAEQILNLIK 401 Query: 130 -----GELAKAGEK----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 GE G+ LLS +G+ TVD RTN L++ D + + + ++D+PV Q Sbjct: 402 GKSEDGEGQSEGDSKSSGLLSERGTATVDARTNTLMVTDTAVVMEQIRSMLQRLDIPVKQ 461 Query: 181 VELSAHIVTINEKSLRELGVKW--------TLADAQHAGGVG----QVTTLGSDLSV--- 225 V + + IV ++ ++LG ++ + + GG Q G DL++ Sbjct: 462 VLIESRIVIASDDFDKQLGSRFGVNRIDPLPVGEGAVFGGSDTFNLQGRQSGGDLNINSR 521 Query: 226 ----------ATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 ++T F + +G LL+LELSAL+ + + +II++PR++ ++ + A I Sbjct: 522 PMNFNFPANAGSSTGQFAFALPTSSGNLLELELSALQAEGKGEIISTPRVITANQKEAFI 581 Query: 276 KQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 +QG EIPY + + SGA +V FK+AVL + TP + RI L L++ ++ G++ + + Sbjct: 582 EQGVEIPY-LEAASSGAVTVAFKKAVLSLTATPQITPDDRIILDLNVKKDNVGEIFGEGE 640 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 +V +ID +E+ETQV VK+GET+ LGGIF + +P LGDIP G+LFR + K++ Sbjct: 641 IQVPSIDTREVETQVLVKNGETVVLGGIFEHETLDSVTKIPFLGDIPGIGRLFRREIKQN 700 Query: 396 ERRELVVFITPRLV 409 +RE+++F+TP++V Sbjct: 701 SKREILIFVTPKIV 714 >UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLX9_9GAMM Length = 702 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 150/417 (35%), Positives = 228/417 (54%), Gaps = 38/417 (9%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K+ L +V + VLQ +AE +LNLVVS V G ++L L +VPW QAL ++K+ GL Sbjct: 292 EKIDLNFQNVELRSVLQIIAEVAELNLVVSDTVGGNITLRLKNVPWDQALDIILKTKGLD 351 Query: 82 TRQEGNILSVHSIAWQNNNIA---RQEAEQARAQANL-PLENRSITLQYADAGELAKAGE 137 R GN+L + A IA RQE E ++ L PL I + Y A E+ + Sbjct: 352 QRTVGNVLLIAPAA----EIAERERQELESSKQVEQLAPLRTEFIQVDYRKASEMMSTIQ 407 Query: 138 --KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 K++S +G + D TN L++R+ TAL + + + D+ V QV + A +V Sbjct: 408 EAKMVSERGFVMADDETNVLMVRETATALRDIRNILKKFDVEVEQVLVEARLVNATSNVT 467 Query: 196 RELGVKWTLA--DAQHAGG------VGQV----TTLG--SDLSV-------ATATTHVGF 234 ++LGVKW D + G +G V TT G S+L V + T +GF Sbjct: 468 KDLGVKWGFGYNDVDNGKGWIVDNSIGNVNFGNTTAGNTSNLMVDLGASVTSPGTIAIGF 527 Query: 235 NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 G + L+L + K + I++ P++L ++ + A I+ GSEIPYQ + E G S Sbjct: 528 KPGASSLLALELSALETDGKAE--IVSQPKVLTTNGKQAKIESGSEIPYQ--TVEDGEVS 583 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 +EFK+ VL ++VTP + RI + L I+Q+ GQVL +GE+ +ID E++T V V Sbjct: 584 IEFKDVVLSLDVTPRINPGDRIAMDLLITQDSIGQVL--PNGEI-SIDNNELQTTVVVPD 640 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G+T+ LGG+F + + VPLLGD+P G LFR+ + E+ EL++FITP+LV + Sbjct: 641 GQTIVLGGVFKNETSETINKVPLLGDLPIMGPLFRNKENQAEKTELLIFITPKLVRN 697 >UniRef50_A5WCG3 Type IV pilus secretin PilQ n=2 Tax=Bacteria RepID=A5WCG3_PSYWF Length = 642 Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 138/474 (29%), Positives = 243/474 (51%), Gaps = 85/474 (17%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 P + + KP +++ V V VL L++ N+V + V+G++ L+L +VPW QAL Sbjct: 173 PKIYSGKP--ISVDFQQVEVRSVLHLLSQFTDTNIVATDQVTGSLMLNLVNVPWDQALDI 230 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL- 132 ++ S L + +GN++ V +A A+Q A + ++QA +PL + I L YA A +L Sbjct: 231 ILTSQQLGKQTQGNVILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKAEDLQ 290 Query: 133 --------------------------AKA---------------GEKLLSAKGSMTVDKR 151 A A +LLS++G + VD R Sbjct: 291 ALIIKASGSPTPTPVAMQHLPASTAVANAPSALPAVVTRLNLPVSSRLLSSRGVIAVDAR 350 Query: 152 TNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW--------- 202 TN L+++D +LS + + Q+D+PV QV + +V+ + +E+GVKW Sbjct: 351 TNTLIIKDTADSLSNIHALIKQIDIPVRQVMIEVRMVSATDNFSKEMGVKWGLLSKGVAH 410 Query: 203 -----------TLADAQ---------------HAG-GVGQVTTLGSDLSVATATTHVGFN 235 TLAD + AG + + L DL ++ + F Sbjct: 411 NDDLLVGASDQTLADLKSFSAPNTAYKGRNKSRAGYAITRPDNLNVDLGISNPAGRIAFG 470 Query: 236 IGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSV 295 + ++ ++DLELSA++ + + ++I++P++L Q A++ G++IPYQ S E G T+ Sbjct: 471 LLSMSDLMIDLELSAMQAEGRGEVISTPKILTLDKQTATVSSGTKIPYQ-SESEGGGTTT 529 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 +F+EA+L ++VTP++ + +I L+L+I P V +G +L ID + T+V V G Sbjct: 530 QFEEALLSLQVTPSITPEDKISLQLNIENGRPNPV---GNGVIL-IDTDRLITRVTVGDG 585 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +TL LGGI+ + + VP GD+P+ G+LF+ D + ++++EL++F+TP+L+ Sbjct: 586 QTLVLGGIYRNQIFNNTQKVPFFGDLPYIGRLFKQDLRRNDQQELLIFVTPKLM 639 >UniRef50_Q39X07 Type II and III secretion system protein:NolW-like:Secretin/TonB, short-like n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39X07_GEOMG Length = 870 Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 132/404 (32%), Positives = 216/404 (53%), Gaps = 27/404 (6%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++VTL D + ++ Q +AE LN +V DV+GT+SL L +VPW QAL ++++ GL Sbjct: 477 RRVTLEFSDADIRKIFQLIAEVSNLNFIVGDDVTGTISLKLVNVPWDQALDVILENKGLG 536 Query: 82 TRQEGNILSVH------SIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 +++GNI+ + ++A + Q+A+++R Q + L+ + YA G++ Sbjct: 537 MQRDGNIVQIRPKSKIMTLADE-----EQKAKKSREQG-MELKTEVFDVNYAAVGDVVTQ 590 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 L S +G ++ D RTNR++++D ++ + + +D+P QV + A IV + Sbjct: 591 FNTLKSERGMISQDARTNRVIVKDIAPVVAEMRNLLKSLDIPEKQVMIEARIVEASSTVT 650 Query: 196 RELGVKWTL--ADAQHAGGVGQVTTLGSDLS--VATATTH-----VGFNIGR-INGRLLD 245 +ELG++W + DA G G L+ TA T G G+ I+G LD Sbjct: 651 QELGIQWGIHARDANTIGVTNADVGFGGILTGLAPTAGTFGPGAAAGITFGKLISGGSLD 710 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGME 305 L+LSAL +++ II+SP+++ + + A I QG IPY S E T EF EA L +E Sbjct: 711 LKLSALASGERIKIISSPKVVTLNNKAAKISQGQSIPYSTVSAE--GTKTEFVEAALTLE 768 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 VTP + G I +K+ + N G V AI+K+E T++ V++GET +GGI+ Sbjct: 769 VTPHIASDGSISMKIKATNN---SAAPAPTGAVPAINKKEATTELLVRNGETTVIGGIYV 825 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + VP DIP G LF+ + + EL++FITP++V Sbjct: 826 DNDSQADQGVPFFKDIPLLGWLFKSSNTQKIKNELLIFITPKIV 869 >UniRef50_Q0AF45 Type IV pilus secretin PilQ n=3 Tax=Nitrosomonas RepID=Q0AF45_NITEC Length = 720 Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 143/424 (33%), Positives = 228/424 (53%), Gaps = 46/424 (10%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L DV + +LQ +A+ LN++ S V G ++L L DVPW QAL V++++ L Sbjct: 296 EKLSLNFQDVEIRSILQVIADFTDLNIIASDSVKGNLTLRLKDVPWDQALDIVLQTSDLD 355 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE---NRSITLQYADAGELAKAGEK 138 R+ GN++ IA + AR+ + + Q LE + L Y A + G Sbjct: 356 KRRVGNVIF---IAPREEMAARERLQLEQNQQITELEVLQTEAFRLNYRTASSIPLKG-- 410 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 +LS +GS+ VD +N L + D T L+ + + VA +D V QV + IV + R L Sbjct: 411 ILSQRGSVEVDDISNTLTVTDIPTRLAEVARHVANLDTQVRQVMIETRIVEATDTFSRNL 470 Query: 199 GVKWTLADAQHAGGVGQVTTLG--------SDLSVATATTHVGFNIG------------- 237 G ++ + +A G LG S+L+ T + G N+ Sbjct: 471 GARFGVQNATRIGSQTNGRRLGISGNLGNSSELAAGTISPSGGDNLNVNLPAAALAGVAG 530 Query: 238 ----------RIN-GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 +IN G L++LELSALE Q IIASPRL+ ++ ASI+QG+EIP+Q Sbjct: 531 GPAALGLSLIKINNGTLINLELSALESDSQGRIIASPRLVTANRVEASIEQGTEIPFQTI 590 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 S ++FK+AVLG++VTP + I +KL ++Q+ G+ AID ++I Sbjct: 591 S--VTRPQIQFKKAVLGLKVTPQITPDDNIIMKLQVNQDTRGESTPAGP----AIDTKQI 644 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 T+V V++G T+ +GGIF + K ++ +PLLGD+P G LF++ K D++REL++F+TP Sbjct: 645 VTEVLVENGGTVVIGGIFEQVEKRDRNQIPLLGDVPLLGNLFKNTAKRDDKRELLIFVTP 704 Query: 407 RLVS 410 R+++ Sbjct: 705 RILN 708 >UniRef50_D0SET7 Type IV pilus biogenesis and competence protein pilQ n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SET7_ACIJO Length = 390 Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 134/395 (33%), Positives = 215/395 (54%), Gaps = 44/395 (11%) Query: 48 LVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAE 107 +V S V G ++L L DVPW QAL ++K+ L R+ GN++ + +A + + E E Sbjct: 1 MVASDTVQGNITLRLKDVPWDQALDIIMKTKNLDKRRNGNVIWIAPVA----ELIKSEEE 56 Query: 108 QARAQANL----PLENRSITLQYADAGELAK----------------------AGEKLLS 141 +A+A A P++ I L YA + ++ K A E LLS Sbjct: 57 EAKAIAQSIKLSPIQTDYIQLSYAKSADVLKLLEDSRDSKGGESNRTAGSDSLALESLLS 116 Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVK 201 A+GS D RTN L++ D + + + + + +D+ V QV + A IVT + RELG+K Sbjct: 117 ARGSAVSDSRTNTLIINDRQQNIDKIRRMIDLLDVAVKQVMVEARIVTASTDFSRELGIK 176 Query: 202 WT---LADAQHAGGVGQVT-TLGSDLSVATATTHVGFNIG--RINGRLLDLELSALEQKQ 255 W+ L ++ GG Q + LG DL+ TA T FN G +I+ +L+LELSAL+ Sbjct: 177 WSAKKLGNSPVWGGDFQPSFDLGVDLATNTAGT---FNFGLLKISDYMLNLELSALQADG 233 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGR 315 +++++P++L Q A I +G+EIPYQ S G + EF+ A L +EVTP++ G+ Sbjct: 234 HGEVLSAPKVLTGDKQKAYILRGTEIPYQTWSATEGLKT-EFRAANLKLEVTPSITPDGK 292 Query: 316 IRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSV 375 +++ L I ++ G + I+ E+ET V V GET+ LGGIF ++ + V Sbjct: 293 VQMALKIEKDTVGTLTSAG----YLINTNELETNVLVDDGETVVLGGIFDDIKQNQYEKV 348 Query: 376 PLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 P GD+P G LF+++ + + EL++F+TPR+V+ Sbjct: 349 PFFGDLPVVGALFKNNTRSSAQTELLIFVTPRIVN 383 >UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 Tax=Acinetobacter RepID=B2I0J4_ACIBC Length = 721 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 138/457 (30%), Positives = 231/457 (50%), Gaps = 72/457 (15%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 K++L D+ V +VLQ LA+ +N+V + V G ++L L DVPW QAL ++K+ L Sbjct: 262 NKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNLD 321 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE---------- 131 R+ GN++ + +A + A++ PL+ I L+YA AG+ Sbjct: 322 KRRNGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAKAGDIMGLITQGSN 381 Query: 132 -------------------------LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSA 166 L LLS +G++T D RTN L++ D ++ Sbjct: 382 NSNGLQHTSGGGTSTSTNLNTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQ 441 Query: 167 LEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL---------------------- 204 + + + +D+ V QV + A IV + +ELGVKW + Sbjct: 442 IRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGILSQGITNNNNLLVGGSETTLWN 501 Query: 205 ----ADAQHAGG----VGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQ 256 + GG + + L DL V+ + F + ++ +LDLELSAL+ Sbjct: 502 LREPKKDETTGGYKYTIERPDNLNVDLGVSNPAGSIAFGLISMSDFMLDLELSALQADGY 561 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQ-VSSGESGAT-SVEFKEAVLGMEVTPTVLQKG 314 ++I++P+++ + Q A + G ++PYQ ++ +G+T + FK+A+L + VTP++ G Sbjct: 562 GEVISTPKVMTADKQTAKVATGQQVPYQSTTNSAAGSTATTSFKDALLSLNVTPSITPDG 621 Query: 315 RIRLKLHISQN-VPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 +I++KL IS++ V G +GE L ++K I T V V +GET+ LGG+F + + Q Sbjct: 622 KIQMKLDISKDSVAGAA---PNGE-LILNKNNINTNVLVDNGETVILGGVFEQTTMNSQT 677 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 VP GDIP G+LFR D K D+++EL++F+TPR+V+ Sbjct: 678 KVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVN 714 >UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fastidiosa RepID=B2I8B2_XYLF2 Length = 636 Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 134/443 (30%), Positives = 229/443 (51%), Gaps = 58/443 (13%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 Q + VT DVPV VLQ +A++ LN+V S V G V+L L +VPW QAL V++ Sbjct: 192 QGYSGRPVTFNFQDVPVRTVLQLIADESNLNIVASDTVQGNVTLRLINVPWDQALDIVLR 251 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRS------ITLQYADAG 130 + GL R++ ++ W + EQ + A + +ENR + + Y A Sbjct: 252 AKGLDKRRDEKVI------WVAPQQELAKYEQEKEDARIAIENREGLITDYVQINYHSAT 305 Query: 131 ELAKA-------------------GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 + KA + LS +G + D+RTN L++ D ++ + + Sbjct: 306 VIFKALTEAKGMGGGGNGTPNNNSDDAFLSPRGRLVADERTNTLMISDIPKKVAQMRTLI 365 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTH 231 +D PV QV + IV + R+LG K+ + A T+GS+++ ++T+ Sbjct: 366 QHIDRPVDQVLIEGRIVIATDSFARDLGAKFGVGAASRFSD--NTATIGSNVTAGSSTSA 423 Query: 232 V-GFNI---GRINGRL----------------LDLELSALEQKQQLDIIASPRLLASHLQ 271 G N+ G N LDLELSAL+Q+ + ++I++PR++ ++ + Sbjct: 424 TRGLNVDLGGPTNTTASVLPSLAYTLLGPKFNLDLELSALQQESRGEVISNPRIVTANQR 483 Query: 272 PASIKQGSEIPY-QVSSGESGA---TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVP 327 IKQG EI Y ++ G +G +V+FKEAVL + VTPT+ R+ L + + ++ Sbjct: 484 EGYIKQGKEIGYVTITGGVAGGQATPNVQFKEAVLELRVTPTITNDNRVFLNMTVKKDEI 543 Query: 328 GQVLQQAD-GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQ 386 Q++ A+ G V ++K+EI T V V G+T+ +GG++ +++ VP LGD+P+ G Sbjct: 544 DQMITIANFGTVPTLNKREINTAVLVDDGQTVVIGGVYEFSDRNSVSKVPFLGDVPFLGN 603 Query: 387 LFRHDGKEDERRELVVFITPRLV 409 LF+ GK+ ++ EL++F+TP+++ Sbjct: 604 LFKKRGKDKQKAELLIFVTPKVL 626 >UniRef50_D1P0E2 Protein transport protein HofQ n=3 Tax=Providencia RepID=D1P0E2_9ENTR Length = 346 Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 115/302 (38%), Positives = 181/302 (59%), Gaps = 17/302 (5%) Query: 116 PLENRSITLQYADAG----ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 PL + L DA ++ + KLLS KG + D TN L++ ++K ++ + +W+ Sbjct: 54 PLSEKIFPLISVDAQLVYQQIIQTDLKLLSEKGQASFDTTTNSLIITESKPRMALITEWL 113 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTH 231 Q D+P QV+++AHIV+ +L+ LG++W G +G++ T T Sbjct: 114 KQKDIPQQQVQITAHIVSSTRTALQALGLEW--------GMLGEMATNPHHSRYNRYNTE 165 Query: 232 ---VGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 V NI ++ LL+++LSALE+ L IIASPRL+ASH +PASI+QG+EIPY ++ Sbjct: 166 PGKVALNILKLGDGLLEMKLSALEKANLLSIIASPRLVASHQKPASIQQGTEIPYVTNTD 225 Query: 289 ESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 + + V+FK+AVLGMEVTPT+ + ++ + L IS N P + + L+I+KQEI T Sbjct: 226 KK--SHVQFKDAVLGMEVTPTISRDNKVEMVLKISHNSPDTAITTSQNHHLSINKQEIAT 283 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 V +K+ +TL LGGIF +K + + +P L +P G LF + + +RR L+VFITP+L Sbjct: 284 SVTIKNNDTLILGGIFQQKQEKTEAGIPFLSQLPLLGNLFTNSFQHIDRRVLIVFITPKL 343 Query: 409 VS 410 ++ Sbjct: 344 IN 345 >UniRef50_A9GGP4 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP4_SORC5 Length = 774 Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 140/433 (32%), Positives = 224/433 (51%), Gaps = 54/433 (12%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +++ L + D + VL+ +++ ++N+V + +VSGTV++ + +VPW QAL+TV+++ GL Sbjct: 345 RRIDLDLKDADIHNVLRLISDVGRVNIVTADNVSGTVTIRMRNVPWDQALETVLQAKGLG 404 Query: 82 TRQEGNILSVHSIAWQNNN----IARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 ++GN++ V IA N IAR+++E A PLE R I + YADA +L + Sbjct: 405 VVRQGNMIRVAPIADLNKERELAIARRKSELQLA----PLETRLIPINYADAKDLQDRSK 460 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 +LS +GS+ VD+RTN L+ RD L+ +E+ V +D QV + A +V + +R+ Sbjct: 461 DMLSPRGSLAVDERTNVLIARDVAGNLNQIEELVRSLDTQTPQVLIEARVVEATSRYVRD 520 Query: 198 LGVKWTLADAQHAGGVGQVTTL--GSDLSVATATTH------------------------ 231 +G++W D + G T L S + +A T Sbjct: 521 IGIQWG-GDGTFSAATGNPTGLVFPSAIGIAGGATDSNSPTGGLSPFSSQVSNPNFAVNL 579 Query: 232 -----------VGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 +GF +G IN + L + LSA E L +++SPR+L + A I QG+ Sbjct: 580 PAIVGAGQGGALGFTLGSINNTVNLGVRLSAAEASGMLRVVSSPRILTLDNREARISQGT 639 Query: 280 EIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVP--GQVLQQADGE 337 IP+ S + T+ F+EA L + V P V G + + + I+++ P Q + D Sbjct: 640 LIPFSQISAQGVQTT--FQEAKLQLLVKPHVTSDGSVAMHVKINRDEPDFNQTSARGDPT 697 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 +L K+E ET + + G T +GGIFTR D VP GDIP G LF+ D R Sbjct: 698 IL---KREAETDLLIMDGHTAVIGGIFTRNTGRNLDQVPFFGDIPVLGLLFQRRRASDTR 754 Query: 398 RELVVFITPRLVS 410 ELV+F+TPR+V+ Sbjct: 755 NELVIFLTPRIVN 767 >UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lovleyi SZ RepID=B3E9T4_GEOLS Length = 891 Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 127/404 (31%), Positives = 215/404 (53%), Gaps = 22/404 (5%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +KVTL D V ++ Q L+E N V+ +V+GT+SL L +VPW QAL ++ + GL Sbjct: 494 RKVTLEFADAEVRKIFQLLSEVSNKNFVLGDEVTGTISLKLVNVPWDQALDIILDTKGLD 553 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQ-ANLPLENRSITLQYADAGELAKAGEKLL 140 R+EG I+ + + ++ +E E ++ + PL+ + YAD + + Sbjct: 554 KREEGTIVLIRG-KGKFKSLLDEEMEIRKSTLKSEPLQTAMFDVNYADLASIVSQFNSIK 612 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 + +G +T D+RTN+++++D K+A+ + + +A +D+P QV + A IV + + LGV Sbjct: 613 TDRGLITQDQRTNKVIVKDVKSAVDDMRKILASLDVPEKQVMIEARIVEASSTFTQSLGV 672 Query: 201 KWTL----ADAQHAGGVGQVTTLGSDLSVATATTHV--------GFNIGRINGRL-LDLE 247 W + A AG T G S A ++ V G + G ++ + LDL Sbjct: 673 NWGIHYRDGSASIAGINSMDTNFGGLASTAPTSSGVSGSPGAAAGISFGTLSSNIKLDLR 732 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 L+A + I+++PR+ + + A I QG +IPY S+ + T +F EA L +EVT Sbjct: 733 LNAAVSAGLVRIVSTPRVATLNHKSAKITQGQQIPYTASTSDKIET--KFVEAALALEVT 790 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 P + G + +K+ + PG G AI+K++ T++ ++ GET +GGIF Sbjct: 791 PHINPNGTVVMKIDAKNDSPGST-----GNPPAINKKQATTEMMLRDGETTVIGGIFVES 845 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + D VP L D+PW G LF+ + + R EL++FITPR+++S Sbjct: 846 ESNNDDGVPFLADVPWLGGLFKSNETKRNRNELLIFITPRIINS 889 >UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2K0_9PROT Length = 688 Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 139/409 (33%), Positives = 215/409 (52%), Gaps = 32/409 (7%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K+TL ++ + L +A+ LN+V+S VSG ++L L DVPW QAL +++S GL Sbjct: 284 EKLTLNFQNISTREALSVIADFTGLNMVISDTVSGNLTLRLKDVPWDQALDIILQSKGLD 343 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGELAK--- 134 R+ GN++ V IA +E ++ + PL S L YA A ++A Sbjct: 344 MRKNGNVIQVAP----REEIASKEKLDFASRQEIGDLEPLRTESFQLSYAKALDIANLLK 399 Query: 135 -AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 LLS +GS D RTN L ++D T L + +V Q+D+PV QV + A V E Sbjct: 400 NKDTGLLSKRGSSVSDLRTNTLFVQDTPTRLEEVRTFVKQLDVPVRQVMIEARFVEAGET 459 Query: 194 SLRELGVKWTLA-------------DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 + LG + + A + + + L SV T FN Sbjct: 460 FNQTLGGRLSYTGPGSTVAGGGFAGPAGNRAALSTTSLLPGAGSVTGGMTLNLFNAAAT- 518 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 ++L LEL+A E IASPR++ PA+I+ G E+PY + + SGATSV FK+A Sbjct: 519 -KVLTLELNASELDGTTKNIASPRVVTGDKTPATIESGVEVPY-LQATSSGATSVAFKKA 576 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 VLG+ VTP + + +KL +SQ+ G + V +I+ ++++TQV V +G T+ + Sbjct: 577 VLGLTVTPQITPDDHVGMKLSVSQDTVGNIYSG----VPSINTKKVDTQVLVDNGGTVVI 632 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 GG++T+ ++ +PLLGDIP G LF+ D ++EL+VFITP++V Sbjct: 633 GGVYTQDATDSKEQIPLLGDIPILGWLFKTDTIVKAKKELLVFITPKIV 681 >UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Burkholderia RepID=A2S716_BURM9 Length = 616 Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 137/403 (33%), Positives = 217/403 (53%), Gaps = 21/403 (5%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + +++ + +A V A A LN+VVS V GTVSL L +V W+ A ++ + GL Sbjct: 217 RPISINLQQASLAAVFDAFARFTGLNIVVSERVRGTVSLRLNNVRWRSAFDALLDAHGLA 276 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK-----AG 136 + G+++ V +A ++ ARA PL +R L+YA A ++ + AG Sbjct: 277 MARRGSVIWVAPVAELAERERQRFDAHARAAQLEPLASRGFVLRYARAADVQRLLAGSAG 336 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 +++LS +GS+ D RTN L + D L+ + + ++D P QV + A IV + R Sbjct: 337 QRILSKRGSVLADPRTNLLFVTDLSGRLAQIADLIGKLDTPSRQVLIEARIVEGDRGFSR 396 Query: 197 ELGVKWTLADAQHAG--GVGQVTTLGSDLSVATATTHVGFNIGRIN--------GRLLDL 246 LG + L A AG G V L+ A GF+ RLLD+ Sbjct: 397 NLGARLAL-RAPDAGERATGIVAGRNGTLAELAARPISGFDAATAGLTLFAARASRLLDV 455 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEV 306 ELSALE + + I++SPR++ + A ++QG+E+PYQ G +G + V+F+ A L +EV Sbjct: 456 ELSALEAEGRGQIVSSPRVVTADRTKAVVEQGAELPYQAKVG-NGVSGVQFRRATLKLEV 514 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 P + GR+ L L ++++ G+ + A G AI + ++T+VEV++G T+++GGIF Sbjct: 515 EPQITPDGRVILDLDVAKDSVGE--ETASGP--AIHTKHVQTRVEVENGGTVSIGGIFES 570 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ++ VPLLG IP G LFRH + +R ELVV+ITP +V Sbjct: 571 DDRDDVTRVPLLGKIPVLGALFRHRAQRAQRSELVVYITPTVV 613 >UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular organisms RepID=B1Y305_LEPCP Length = 726 Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 146/445 (32%), Positives = 235/445 (52%), Gaps = 64/445 (14%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 K++L + V +LQ +A+ N+V S V+G V+L L DVPW QAL ++++ L Sbjct: 281 KLSLNFQSIEVRSLLQVIADFTNFNIVTSDSVTGNVTLRLKDVPWDQALDIIMQAKSLGV 340 Query: 83 RQEGNILSVHSIAWQNNNIARQEAE-QARAQ-ANL-PLENRSITLQYADAGELAK----- 134 ++ GN+L IA ++ A+++ E +AR Q A+L PL +S L Y A E+ K Sbjct: 341 KKAGNVLW---IAPKDELAAKEKQELEARKQIADLEPLRTQSFQLNYTKAEEVVKSLTGQ 397 Query: 135 ----AGE-------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 AG ++LS +GS + RTN+L + D + L + Q +A++D+PV QV + Sbjct: 398 QQGSAGTGQGGNVTRILSQRGSAAYESRTNQLFVSDLPSKLEEVAQMIAKIDVPVRQVMI 457 Query: 184 SAHIVTINEKSLRELGVKWTLADAQH-AGGV-------------GQVTTLG--------- 220 A IV + R LGVK D + GGV G +++G Sbjct: 458 EARIVEAEDSFGRTLGVKLGATDLRGINGGVPGWGGNNTRIALGGNYSSIGDTTLQQATG 517 Query: 221 ---------------SDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRL 265 S L ATA T G + R L+LELSALE + + +++SPR+ Sbjct: 518 SIYANSQFVNLPANTSSLGGATAATFALSLFGASSNRFLNLELSALEAEGKGKLVSSPRV 577 Query: 266 LASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQN 325 + + A I+QG+E+PYQ + A S+ F++A L +EVTP + +G I + + ++++ Sbjct: 578 VTADQVKALIEQGTELPYQTGGNQQTAPSIAFRKATLKLEVTPQITPEGNIIMDVDVNKD 637 Query: 326 VPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFG 385 GQ Q G AI+ + ++TQV V++G T+ +GGIF + VP+LGDIP+ G Sbjct: 638 SVGQ--QTLAG--FAINTKHVKTQVLVENGGTVVIGGIFETTETESVNKVPVLGDIPFLG 693 Query: 386 QLFRHDGKEDERRELVVFITPRLVS 410 LFR+ + + EL+VF+TP++++ Sbjct: 694 VLFRNKTRVANKTELLVFLTPKVIT 718 >UniRef50_A7BUG3 Bacterial type II and III secretion system protein n=3 Tax=Gammaproteobacteria RepID=A7BUG3_9GAMM Length = 698 Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 134/429 (31%), Positives = 227/429 (52%), Gaps = 48/429 (11%) Query: 22 QKVTLMVDDVPVAQVLQALAEQE--KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 Q V+ D+ V L L + LN+V S V G+++L L ++PW QAL ++++ Sbjct: 273 QLVSFNFQDIDVRAALTLLFDLPGVNLNMVASDVVKGSITLRLKNIPWDQALDIILEARE 332 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN---RSITLQYADAGE----L 132 L R+ GN V I + N R++ E + + LE+ I + YA A + L Sbjct: 333 LGMRKIGN---VAMIDLKKNIDERKQRELSNKKKIKELESLYTEFIRINYAKAKDIEALL 389 Query: 133 AKAGE-KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +G+ LS++G+++ D+RTN L+++D ++ + + +A++D PV QV + + IV N Sbjct: 390 RTSGQHSFLSSRGNVSTDERTNTLIIQDTAAKIAEIRKLLAELDTPVRQVLIESRIVIAN 449 Query: 192 EKSLRELGVKWTLA-------------------DAQHAGGV-----------GQVTTLGS 221 + LGVK+ + D +GG GQ Sbjct: 450 NNFSKALGVKFGYSANEDLGFGNGIVFGGKKGGDTTFSGGTGFSSDNTATGEGQGENFIV 509 Query: 222 DLSVATAT-THVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSE 280 L A A VG IG+I LL LELSA++ + +II++PR++ + Q A I QG+E Sbjct: 510 SLPAAIANPAAVGLAIGKIGSYLLQLELSAMQSEGSGEIISNPRIITGNQQEAIITQGTE 569 Query: 281 IPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLA 340 IPY +G V+FK+AVL ++VTP + R+ ++L + ++ PG + G L+ Sbjct: 570 IPYVQQAGVGSVAQVQFKQAVLELKVTPQITPDDRVNMELAVKKDSPGVNI----GGNLS 625 Query: 341 IDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERREL 400 IDK+E++T V V +GET+ LGG++ R + + +P D+P G+LF++ K D++ EL Sbjct: 626 IDKREVKTNVLVDNGETVVLGGVYERTRSNAINRIPFFADLPLIGELFKNRSKSDDKSEL 685 Query: 401 VVFITPRLV 409 ++F+TP+++ Sbjct: 686 LIFVTPKIL 694 >UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2F0_9DELT Length = 514 Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 126/408 (30%), Positives = 224/408 (54%), Gaps = 25/408 (6%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 P + L+ DVP+ +++LA + N++++P V+G V++H+ VPW ++++S GL Sbjct: 99 PTSINLV--DVPIGTAMRSLARVAQQNIIINPSVTGNVNIHVEQVPWNDVFMSIIESYGL 156 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 + EG ++ V S+ + RQ + PL+ R + +++++ LA++ +L Sbjct: 157 VAVVEGGVIRVMSVEDLRRQVERQGLYLEEEHVS-PLQTRVVPVRFSEPASLAESLTPML 215 Query: 141 S------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 S +GS+TVD+ T L++RD L L ++ ++D QV + AHI+ N++ Sbjct: 216 SRDKEGNPRGSVTVDRHTRSLVIRDTAENLERLTSFLQEVDQATPQVLIEAHIIETNQEV 275 Query: 195 LRELGVKW--------TLADAQHAGGVGQV--TTLGSDLSVATATTHVGFNIGRINGRLL 244 RELGV+W ++DA AGG +G S+ T VGF + G +L Sbjct: 276 ARELGVQWGSFWRGQQRVSDA--AGGFTYQAGNPIGEQYSLDVLTGEVGFYTASVAGNIL 333 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGM 304 +++L AL+++ +++I++ P + A ++ G+E+PYQ S E G TSV++K+AVL + Sbjct: 334 EMQLQALQREGKVNILSRPSVATLDNHEAVLESGTEVPYQ--SIEDGTTSVQYKDAVLRL 391 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 VTP V+ + I+LK+ +Q + + G I K+ +T + V+ G T+ + G+ Sbjct: 392 LVTPQVISRENIKLKIE-AQKDEVDLTRTVMGNPFII-KKLAQTNLIVEDGSTVVIAGLA 449 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + S VPLL +IP G FR D + E EL++FITPR++S++ Sbjct: 450 KERQASSSTGVPLLKNIPGLGVFFRSDARAGEFEELLIFITPRILSAD 497 >UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=cellular organisms RepID=Q3A2N4_PELCD Length = 874 Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 140/406 (34%), Positives = 216/406 (53%), Gaps = 27/406 (6%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 QK++L+ DD + +LQ + E LN++V DV G ++L L DVPW QAL V++ L Sbjct: 477 QKISLVFDDADIRNILQLIGEVSDLNIIVGDDVKGNMTLRLIDVPWDQALDLVLEIRELG 536 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELAKAGEKLL 140 QEGN+L + +A + + +++ ARA+ L L I + Y D L +A +K L Sbjct: 537 KLQEGNVLRILPLA-KIRQMQQEQFAAARAKEKLEDLVTDLIPVSYTDVEGLVEACKKRL 595 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S +G + D R +L++ D + ++ ++Q V +D PV QV + A IV + R+LGV Sbjct: 596 SDRGKVIGDVRDKKLIVTDIPSVVADIKQLVRLLDTPVRQVLIEARIVEASATFSRDLGV 655 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI-------GRING----------RL 243 W ++ QH G G+D S+ T VG + G ++G + Sbjct: 656 NWGIS-YQHNPGS---DVEGNDASIGMGGTLVGIPVSPGEVSSGIVSGLTFGQVGVDKTV 711 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLG 303 LDL L+ALEQ I+++PR+ + + A + QG+EIPY +S + G T EFK+A L Sbjct: 712 LDLRLAALEQSGHGRIVSTPRVSTLNGEEAEVAQGTEIPY-LSVSDDG-TKTEFKKAELS 769 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 ++VTP + G + L++ + G E AID + T+V VK GET +GGI Sbjct: 770 LKVTPEINPDGSVILEIEAKNDSRGA--NTGLSEAPAIDTKRATTKVLVKDGETTVIGGI 827 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 F + VP L ++P G LF+ +ERREL+VFITPR++ Sbjct: 828 FIQDKSESDSGVPWLMNVPILGHLFKSKSVSEERRELLVFITPRIL 873 >UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW26_DICNV Length = 734 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 140/440 (31%), Positives = 233/440 (52%), Gaps = 58/440 (13%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + ++L D+ V VL +AE + N+VVS VSG ++L L +VPW QAL ++K+ GL Sbjct: 285 EPLSLNFQDIEVRAVLNIIAEFTQQNIVVSDTVSGNITLRLDNVPWDQALDIIMKTKGLA 344 Query: 82 TRQEGNILS---VHSIAWQNNNIARQEAEQA--RAQANLPLENRSITLQYADAGELAKAG 136 R+ GN + ++ + + A +A + + Q +P++ I ++YA A +L + Sbjct: 345 KRENGNDKTGRIIYIAPEKELDTAEIDALEGWQKKQQLMPMQTDFIRIKYAKASDLQRIL 404 Query: 137 EK-------------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 EK +LSA+GS+T+D+R N L++ D + A+ VA++D Sbjct: 405 EKSREISSDGTKNGILAAQDAVLSARGSVTIDERMNALIVSDIPAKIQAVRDLVARLDES 464 Query: 178 VGQVELSAHIVTINEKSLRELGVKWTLADAQHAG-----GVGQVT--------------- 217 V QV + A +V + R+LG ++ L+ AG G G +T Sbjct: 465 VRQVLVDARLVITKDNFARDLGARFGLSFKGTAGSNPIVGSGNLTGTTFYAGMLEEKTIP 524 Query: 218 ---TLGSDLSVATATTHV-GFNIGRINGRLL-DLELSALEQKQQLDIIASPRLLASHLQP 272 LG +L +A+ + I + +L DLEL AL+ + + ++I+SPR++ Sbjct: 525 IDNRLGVNLGIASPNVRAPSYGISILGSDVLVDLELQALQNEGRSEVISSPRVVTQDGNQ 584 Query: 273 ASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQ---NVPGQ 329 A + G EIPY + + G+ ++KEA+L +EVTP V R+ +++ I + N Q Sbjct: 585 AKVMSGQEIPYS-TLDDKGSVQTDYKEALLSLEVTPRVTPNDRVNMEIEIKKDRVNWSEQ 643 Query: 330 VLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFR 389 VL Q AIDK + T+VEV +GET+ LGGI+ ++ ++ VPLLGDIP G +F+ Sbjct: 644 VLGQP-----AIDKNLLNTKVEVANGETIVLGGIYEQEQSLSENKVPLLGDIPVVGNVFK 698 Query: 390 HDGKEDERRELVVFITPRLV 409 + K+ + EL++FITPR++ Sbjct: 699 NTNKKFTKNELLIFITPRVI 718 >UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxobacter RepID=A7H857_ANADF Length = 893 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 142/421 (33%), Positives = 227/421 (53%), Gaps = 38/421 (9%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +++TL D+ + +L+ +A+ K N+VV+ DV+G V++ L +VPW QAL V+KS GL Sbjct: 469 RRITLDFHDIDIRNLLRLIADVSKKNIVVADDVTGKVTVALRNVPWDQALDLVLKSKGLG 528 Query: 82 TRQEGNILSVHSI-AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 + GN++ + A AR EAE+AR +PL+ R I + +A AG+++ + +L Sbjct: 529 KEEMGNVIRIARFEAIAKEQQARAEAEKARIPL-MPLKVRIIPVNFARAGDVSGRVKDVL 587 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S +GS++ D+RTN L+++D + AL E V +D + QV + + IV + + LGV Sbjct: 588 SERGSVSTDERTNVLIVKDVQEALVRAEGLVRNLDTEIPQVLIESRIVEASSNFNKALGV 647 Query: 201 KWTLADAQHAGGVGQVT------------------TLGSDLSVATATT-----------H 231 +W +A G T + G+ + A + Sbjct: 648 QWG-GNASFTQATGNPTGVAFPNNVAAAGGAGPGNSFGTAANPNYAVSLPAPVGDGQGGA 706 Query: 232 VGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY-QVSSGE 289 +G G G L+L LSALE + I++P++ + A+I QG IP+ QVS+ Sbjct: 707 LGLVFGSAGGAFNLNLRLSALENNGVVKTISAPKIATIDNREATIGQGISIPFSQVSA-- 764 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 SG + F EA L ++VTP V G I LK+ + N P L A+G+ +I K+E ET+ Sbjct: 765 SGVNTT-FIEAKLELKVTPHVSADGSILLKIKATNNQPNPQLTGANGQP-SISKREAETE 822 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V VK GET +GGI+TR+ + VP LG +P G FR+ ++D+ EL++FITPR++ Sbjct: 823 VLVKDGETTVIGGIYTRQTANRTSEVPFLGKLPLLGYFFRNMSEQDDHTELLIFITPRIL 882 Query: 410 S 410 + Sbjct: 883 N 883 >UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein n=19 Tax=Francisella RepID=Q14H71_FRAT1 Length = 594 Score = 200 bits (508), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 145/433 (33%), Positives = 226/433 (52%), Gaps = 48/433 (11%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 + G +P +++ D PV VLQ L+E LNLVVS V G +S+ L +VPW + + Sbjct: 172 VEGFNVNEP--ISISFKDAPVQTVLQVLSEFAGLNLVVSSSVHGNISIDLKNVPWNEVMN 229 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRS------ITLQY 126 V+ S GL T++ +IL V + A IA QE Q Q LEN + I L Y Sbjct: 230 IVLVSKGLATKKMSSILYVATAA----EIAAQE--QLELQTKRSLENNATLVTEFIPLNY 283 Query: 127 ADA-------GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 A +AK ++S +GS+T D RTN L++ D + L +++ V ++D+P Sbjct: 284 TTAQAAQTVITSMAKQNGGIMSPRGSITADARTNTLIVTDTEEKLPRIKEVVNEIDIPND 343 Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGS-----------------D 222 QV + A IV + S ELG + + D +G + T S D Sbjct: 344 QVLIEARIVEVLRTSALELGFNYGVVDPSGRVNIG-LDTFNSNPNPAPGPTPGPTPTPVD 402 Query: 223 LSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 V T T + + I G L++E+ ALE + + +ASP L+ ++ Q A IK G ++P Sbjct: 403 TFVGT-TAKLAYTIA--GGVRLEMEVRALESESLAEEVASPHLVVANNQVAFIKDGEDVP 459 Query: 283 YQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNV----PGQVLQQADGEV 338 Y + SGA +V F+EAVL ++VTP + G I + + +++N PG+ Q D Sbjct: 460 YN-QATASGAAAVAFQEAVLELQVTPQIAPDGNIIMDILVTKNSVGASPGKTPQGGDLPP 518 Query: 339 LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR 398 + I K+EI T+V K G+T+ +GGI+ + K ++ +P LGDIP+ G LF + D+ Sbjct: 519 I-IKKREITTKVMTKDGDTVVIGGIYQKTQKEERNKIPFLGDIPYLGYLFSYTKITDQDS 577 Query: 399 ELVVFITPRLVSS 411 EL++FITP+++ S Sbjct: 578 ELLIFITPKIIES 590 >UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobacillus RepID=B5EP42_ACIF5 Length = 784 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 144/473 (30%), Positives = 230/473 (48%), Gaps = 90/473 (19%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 ++++ ++ V LQ +A+ N+VVS +V+G++S+ L + PW+QA Q +++S GL Sbjct: 303 RLSMDFQNISVRDALQVIADFTHQNIVVSNNVTGSLSIRLKNEPWEQAFQVILQSQGLAV 362 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGELAK---- 134 + GNIL V + I QE Q +A A+ PLE I ++YA A E+A Sbjct: 363 KHIGNILWVAPAS----QITSQEEAQLKADASKRKLEPLETELIRIRYAKASEIASLLQG 418 Query: 135 -----------------------------------AGEKLLSAKGSMTVDKRTNRLLLRD 159 G LL +GS+ V RTN LL+RD Sbjct: 419 FDQNKEPGGGETGNEMNPAQNAALASALGIPNSSLIGNSLLGPRGSVAVVTRTNSLLVRD 478 Query: 160 NKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW----------TLADAQH 209 ++ ++ +A++D PV QV + A IV + + + LGV W + + Sbjct: 479 TPQDIANIKHLIAKIDRPVPQVLIEARIVQVTTSAAQSLGVNWGGTYTSGGGGGIVNLSG 538 Query: 210 AGGVGQVTTLGS---------------------DLSVATATT--------HVGFNIGRIN 240 G G +T G +L +TA T +GF +G Sbjct: 539 TGATGVTSTQGGAYPMSGTTTTTGTGFTTPALVNLVPSTAGTALASMNPASLGFALGTAA 598 Query: 241 G-RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKE 299 G R+L+L+L AL+ + II+SP++L + A I+QG EIPYQ ++ SGAT+V FK+ Sbjct: 599 GNRILNLQLQALQADNRAKIISSPKVLTQDNEKAVIEQGQEIPYQQAT-SSGATAVSFKK 657 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 AVL ++VTP + G+I L + + P G + I+ Q+++T++ V +G+T+ Sbjct: 658 AVLSLDVTPHISPNGKITLDVDARNDQPNYAQAMPSG--IPINTQQVKTKLLVNNGQTVV 715 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 +GGI+T + VPLL DIP G LF+ + EL+VF+TP++V E Sbjct: 716 IGGIYTDSTTQNETGVPLLRDIPLLGWLFKSHINSVAKTELLVFLTPKVVGGE 768 >UniRef50_Q1K2X4 Type II and III secretion system protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2X4_DESAC Length = 727 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 130/414 (31%), Positives = 221/414 (53%), Gaps = 30/414 (7%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 P V +P VTL++DD + +V+Q +AE LN+++S DV G VSL L DVPW QAL Sbjct: 325 PKVYTGEP--VTLVLDDADIRKVMQLIAEISNLNIILSDDVKGKVSLRLHDVPWDQALDL 382 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPL--ENRS--ITLQYADA 129 ++ L T +GN++ + + I + EAE+ +A ++ E R+ + Y D Sbjct: 383 ILDVKQLGTITQGNVVRILPLG----TIKKMEAERLKATKDIKKLEETRTEIFVINYKDT 438 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 + + +LS +G + + + + ++++ D + L + + Q+D PV QV + A IV Sbjct: 439 EAIEDVIDDVLSNQGEVQLIEGSKKIMVNDIPSKLEEIRMLINQLDEPVKQVLIEARIVE 498 Query: 190 INEKSLRELGVKWTLADAQHAGGV---------GQVTTLGSDLSVATATTH---VGFNIG 237 + + + G+ W +G V LG + T+ T G Sbjct: 499 ADTSAEQTFGIHWGFEFDNDSGSSGGGIGSSLDNAVVGLGGNFITPTSATDGLGTALTFG 558 Query: 238 RI--NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSV 295 R+ + +LDL+LSALE +I+SP+++A + A I QG+EIPY+ +S T+ Sbjct: 559 RVGLDTIVLDLQLSALESSGGGKVISSPKVMALDGETARIGQGTEIPYKTTS--DNGTTT 616 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 EFK+A L +EVTP + I L++ + + PG + DG +AI+ +E ET++ +K+G Sbjct: 617 EFKKAELALEVTPLINPDNTILLEILATNSSPG--VAYTDG--VAINTKEAETKLLLKNG 672 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ET +GGI+T ++ P L D+P+ G LF++ ++R EL++F+TP +V Sbjct: 673 ETTVIGGIYTENEQNSDSGTPYLKDLPFIGNLFKYKTSSNDRTELLIFLTPHIV 726 >UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9K2_BURGB Length = 649 Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 138/438 (31%), Positives = 216/438 (49%), Gaps = 55/438 (12%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++++L + P+A V A A ++V+S V G +L L DVPW+ A ++ + GL Sbjct: 202 RRISLDLQQAPLAAVFDAFARFTGQSIVLSGRVQGAATLRLRDVPWRDAFDALLDANGLA 261 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAE---QARAQANLPLENRSITLQYADAGELAK---- 134 + G ++ V +A AR+ A AR A PL +R+ L+Y A ++A+ Sbjct: 262 MARRGGVIWVAPVA---ELAARERARFETHARTAALEPLASRAFVLRYPRAKDVARLLTG 318 Query: 135 --AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 AG+++LS +GS+ D RTN L + D L+ + +AQ+D P QV + A IV Sbjct: 319 GAAGQRVLSRRGSVLADPRTNLLFVTDLDGRLAQIAALLAQLDRPSRQVLIEARIVEGER 378 Query: 193 KSLRELGVKWTL-----------------------------ADAQHAG-GVGQVTTLGSD 222 RELG + L D+ G G V G Sbjct: 379 GFSRELGARLALRSSAWGGSRAGAGAGGSGGSDGGAGGAAMPDSNPGGAATGIVGGPGGR 438 Query: 223 LSVATATTHVGFNIGRIN--------GRLLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 L +A GF RLLDLELSALE + + I++SPR++ + PA Sbjct: 439 LLDLSARPLAGFEAATAGLTLFVAGASRLLDLELSALEAQGRGRIVSSPRIVTADRAPAL 498 Query: 275 IKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 I+QG+E+PYQ G G + V+F+ A L +EV P + +G + L L ++++ G+ Sbjct: 499 IEQGTELPYQAKVG-LGVSGVQFRRATLKLEVEPQITPEGHVVLDLDVAKDSVGESTDAG 557 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 AI + + T+VE+++G T+++GGI+ + VP+LG IP G LFRH + Sbjct: 558 P----AIHTKHVRTRVEIENGGTVSIGGIYESDRRDDVTRVPVLGKIPMLGALFRHRARR 613 Query: 395 DERRELVVFITPRLVSSE 412 ELVV+ITPR+V ++ Sbjct: 614 QRTAELVVYITPRVVGAQ 631 >UniRef50_Q5P5P1 Fimbrial type-IV assembly protein PilQ n=4 Tax=Betaproteobacteria RepID=Q5P5P1_AZOSE Length = 721 Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 138/435 (31%), Positives = 233/435 (53%), Gaps = 54/435 (12%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L ++ V VLQ +A+ N++ S V G ++L L DVPW QAL ++++ GL Sbjct: 289 EKLSLNFQNIDVRSVLQVIADFTNFNIITSDSVQGNLTLRLKDVPWDQALDIILQAKGLD 348 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGE----LA 133 R+ GN++ + + +A +E Q AQA + P++ S + Y A E L Sbjct: 349 MRKTGNVIWIAP----SEELAMREKLQLEAQAQIGDLEPVQTESFQINYHKAKEIFDFLK 404 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 + +LS +GS+ +D+R+N+L + D + L A+ + V ++DL QV + A IV N+ Sbjct: 405 SKDQTMLSKRGSVVMDERSNKLFVTDVVSRLDAIRRLVGEIDLLPRQVMIEARIVEANKD 464 Query: 194 SLRELGVKWT-----------------LADAQHAGGV-------GQVTTLGSDLSVATAT 229 R+LGV+ + A GG+ GQ T +D VAT Sbjct: 465 FARDLGVRLGVGGVGGRTVGFDANGRPIRRATVGGGLENTGFNAGQ-TVAATDAQVATVP 523 Query: 230 THVGFNIGRING--------------RLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 + N+ G R L+LELSALE + I++SPR+L ++ A I Sbjct: 524 GGLNVNLPAPGGSGVLSAVLWNNTATRFLNLELSALESDGRGRIVSSPRVLTANQVEAVI 583 Query: 276 KQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 +QG++IPY + SGA S++F++AVL ++V P + +GR++L + ++++ P + + Sbjct: 584 EQGTKIPYPEKT-SSGAASIKFEKAVLSLKVKPQITPEGRVQLFVLVNKDRP-DFARSVE 641 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 G + K I+T+V V++G T+ +GGI+ + +PLLG++P G LFR+ K Sbjct: 642 GTPTVVTKN-IQTEVLVENGGTVVIGGIYEEEETDSVTRIPLLGEVPLVGALFRNTIKNS 700 Query: 396 ERRELVVFITPRLVS 410 +R EL++FITPR+V+ Sbjct: 701 KRSELLIFITPRIVA 715 >UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Reinekea blandensis MED297 RepID=A4BAN5_9GAMM Length = 709 Score = 193 bits (491), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 145/442 (32%), Positives = 219/442 (49%), Gaps = 70/442 (15%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L D+ V VLQ +A NLV S +SGT++L L +VPW QAL+ V+K+ GL Sbjct: 277 EKLSLNFQDIEVRDVLQIIANYIGFNLVASDSISGTITLRLNNVPWDQALELVLKTNGLD 336 Query: 82 TRQEGNILSVHSIAWQNNNIARQE--AEQARAQAN--LPLENRSITLQYADAGELA---- 133 RQ GN+L V A +A QE +AR QA PL + + YA A ++A Sbjct: 337 KRQTGNVLLVAPAA----ELAEQERLELEAREQAEKLAPLRTEYVQVNYARAADIASILR 392 Query: 134 ----------KAGEK------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 G++ LS++GS++VD+RTN L++ D L + + Sbjct: 393 SSSSAAAAAANVGDESGGVNSLPSSGGFLSSRGSVSVDERTNTLIITDTSVNLDGIRSAI 452 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKW--TLADAQHAGGVGQVTTLGS-------- 221 + D+PV QV + A IV+ +LGV+W + +Q+ G V + S Sbjct: 453 SFFDVPVEQVLIEARIVSARTSVGDQLGVRWGGAIFPSQNVFATGTVESSASIESDIYGG 512 Query: 222 ----DLSVATAT--------THVGFNIGRINGRLLDL--ELSALEQKQQLDIIASPRLLA 267 DL+ A F +G I LLDL E+SALE + ++++ P+++ Sbjct: 513 SPNPDLTFPDAFAVNLPATGNASSFAVGLIADNLLDLDLEISALESLGEAEVVSQPKIVT 572 Query: 268 SHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVP 327 S Q ASI G + + E G T +F EA L + VTP V ++ L L ++Q+ Sbjct: 573 SDGQAASIFSGQNVAF---PAEDGGT--QFIEAGLNLNVTPQVTPDDKVILTLTVNQDS- 626 Query: 328 GQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQL 387 L G AID + TQV V++G TL LGG++ + + P+LGD+P G L Sbjct: 627 ---LAAGGG---AIDTNTVSTQVLVENGVTLVLGGVYRTEKTQLVEKAPILGDLPVVGNL 680 Query: 388 FRHDGKEDERRELVVFITPRLV 409 F+ DER EL++FITP+L+ Sbjct: 681 FKRTTTSDERSELLIFITPKLI 702 >UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TDF1_RICCO Length = 536 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 129/426 (30%), Positives = 220/426 (51%), Gaps = 45/426 (10%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L + + V +L+ + + N+VVS + GT++L L DVPW QAL ++K GL Sbjct: 113 EKLSLDFNGIDVKSLLRIIGDFTGKNVVVSDSIQGTITLRLKDVPWDQALDIIMKQKGLG 172 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQ---ANLPLENRSITLQYADAGEL----AK 134 GN L A + AR++ +Q + PL +S ++Y A ++ + Sbjct: 173 MDNLGNTLV---FAPKEEIAARRKQDQEQENQIDETKPLVTQSFQIKYQKAADIKTLISD 229 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + LLS +G+ VD TN + ++D T+++ +++ + ++D+P QV + + IV N+ Sbjct: 230 PKQPLLSKRGTAVVDPSTNTMFVKDIDTSMTKIQEILNKIDIPSRQVLIESRIVQANDTF 289 Query: 195 LRELGVKWTLA----------------------DAQHAGGVGQVTTLGSDLSV-----AT 227 + LG ++ + + +A G + TT DL+V AT Sbjct: 290 GKSLGARFGVVKNNALTAKGLNPGNDVLTSGSLSSTYATGQAKQTTTPDDLNVNLPASAT 349 Query: 228 ATT--HVGFNIGRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ 284 A T + R+ G LL++ELSA E ++ I+SPR++ ++ Q A+ G+EIPYQ Sbjct: 350 AGTVSSAALTLLRLPAGFLLNMELSAAESDSKIKTISSPRVITANQQTATFDAGTEIPYQ 409 Query: 285 VSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 ++ SGATSV FK+A LG+ VTP + +I L + ++++ GQ+ V +ID Sbjct: 410 QAT-SSGATSVSFKKATLGVNVTPQITPDDKINLDIEVTKDDVGQIFNG----VPSIDTN 464 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 +++T+V V +GET LGG VP IP G LF+ ++EL+ FI Sbjct: 465 KVKTKVLVDNGETAVLGGFLIESKNDSNQRVPFFSSIPVVGNLFKSTLNTHSKKELLFFI 524 Query: 405 TPRLVS 410 TP+++S Sbjct: 525 TPKIMS 530 >UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS Length = 700 Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 137/433 (31%), Positives = 218/433 (50%), Gaps = 55/433 (12%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++++L ++ V VLQ LA++ +N+V S V G ++L L DVPW QAL V+ + L Sbjct: 275 KRISLDFQNIEVRTVLQILAQESGMNIVASDSVQGKMTLSLKDVPWDQALDLVMDARNLD 334 Query: 82 TRQEGNILSVHSIAWQNNNIA---------RQEAEQARAQANL-PLENRSITLQYADAGE 131 R+ GNI+ NIA R EA+ R +L L +++ L+Y + E Sbjct: 335 MRKHGNII----------NIAPRQELLDKDRNEAKARREMEDLGALYSKTFQLKYKNVEE 384 Query: 132 L-----------AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 +LS +GS +D TN L++ DN++ + E+ + ++D+P Q Sbjct: 385 FKNILRLSDSPNTNDRSNILSTRGSALIDPATNTLIVTDNQSVIQKFERLIDELDVPAKQ 444 Query: 181 VELSAHIVTINEKSLRELGVK--------------WTLADAQHAGGVGQVTTLGS----- 221 V + A IV + R LGVK W + A + T+ G Sbjct: 445 VMVEARIVEAADGVSRSLGVKFGARRNGATSWGGDWNNSIALNNRSTNSGTSTGGVAFNP 504 Query: 222 --DLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 +L VA+AT+ + I L LELSA+E + I++PR+L + A I+QG+ Sbjct: 505 NVNLPVASATSSISV-IHSWAAGALGLELSAMETENLTKTISTPRVLTQDRKEAEIRQGT 563 Query: 280 EIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL 339 +IPY S + G +S FK+AVL ++VTP + +I L + I+++ P A+GE Sbjct: 564 QIPYTTRSSD-GDSSTAFKDAVLSLKVTPRITPDSKIILDIAINKDEPDYNNVNAEGEP- 621 Query: 340 AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRE 399 I + ++TQ ++ G TL +GGI+ + + VPLLGDIP G LF+ + R E Sbjct: 622 GIVTRAVKTQAMIEDGATLVVGGIYQEQMANNVSKVPLLGDIPVLGNLFKSRSRSRSRNE 681 Query: 400 LVVFITPRLVSSE 412 L+ FITPR++ +E Sbjct: 682 LLFFITPRIMGAE 694 >UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD Length = 901 Score = 190 bits (483), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/421 (31%), Positives = 219/421 (52%), Gaps = 35/421 (8%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++V+ D+ + +L+ +AE K N+VV+ DVSG V++ L +VPW QAL V+++ L Sbjct: 480 KRVSFEFKDIDIQNLLRVIAEISKKNIVVADDVSGKVTIRLRNVPWDQALDLVLRTKALG 539 Query: 82 TRQEGNILSVHSI-AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 + GNI+ + + + RQE +++ Q + N + + YA A ++A + +L Sbjct: 540 KEEFGNIIRIAPLKTLEEEARLRQERKKSLQQQEDLMVNL-LPVNYAVAADMAARVKDVL 598 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S +GS+TVD+RTN L+++D ++ V +D QV + + IV N R LGV Sbjct: 599 SERGSVTVDQRTNVLIVKDVRSNTERARSLVRSLDTQTPQVLIESRIVEANTSFSRSLGV 658 Query: 201 KWTLADAQHAGGVGQVTTL-----------------------GSDLSVATATTH-----V 232 +W A+ G T L +++ T T + Sbjct: 659 QWG-GQARAGQATGNSTGLIFPNNLAVTGGVTGTGAGLPDNPNFAVNLPTGTGQGVGGAM 717 Query: 233 GFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 GF G G L L+L LSA E + + I++P++ A I QG IP+ +S + Sbjct: 718 GFTFGSAGGALQLNLRLSAAENEGSVKTISAPKVTTLDNNTARINQGVSIPFSQTSAQGV 777 Query: 292 ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 T+ F EA L +EVTP + Q G + + ++ S N P A+G+ +I ++E TQV Sbjct: 778 NTT--FVEARLSLEVTPHITQDGSVLMSINASNNQPDPSSTGANGQP-SIQRKEANTQVL 834 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VK G+T +GGI+ R+ + +SVP L IP G LF+++ + D R+EL++FITPR+++ Sbjct: 835 VKDGDTTVIGGIYVRRGATQVNSVPFLSRIPVLGLLFKNNSETDTRQELLIFITPRILNR 894 Query: 412 E 412 + Sbjct: 895 Q 895 >UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHB7_9DELT Length = 1125 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 131/428 (30%), Positives = 217/428 (50%), Gaps = 45/428 (10%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + + + + D P+ VL ++ ++N++ P+V GTV++ L+ VPW QAL +++S L Sbjct: 697 EPIDIELQDAPIKDVLLLFSDIGRVNIIAGPEVQGTVTMKLSAVPWDQALDIILRSLNLG 756 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELAKAGEKLL 140 QEGN++ V + A + R+ E+A A+ L PLE R I+L YAD G++ + +L Sbjct: 757 MVQEGNVIRVATQATLEDE-RRKAIEEANARVQLKPLETRLISLSYADVGDMLPKVQSVL 815 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S++G++T D RTN L++ D ++ E V Q+D QV + A IV LR+LG+ Sbjct: 816 SSRGTVTPDTRTNTLIVMDVAENIALAESLVRQLDSQTPQVLIEARIVEARTNWLRQLGI 875 Query: 201 KWTLADAQHAGGVGQVTTL---------------------------------GSDLSVAT 227 +W D + G G T L DL Sbjct: 876 QWGF-DFVASPGTGNPTGLLFPNAIGIGGGSGSNQSPVNGLILPGAAANPNYAVDLPAVV 934 Query: 228 ATTH---VGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 T +GF+ G ++G L +L LSA E + + II++P+++ A I+QG +IP Sbjct: 935 GTGSGGALGFSFGSLSGNLNTNLRLSAAENEGDVRIISAPKIVTLDNTEAQIEQGVQIPI 994 Query: 284 -QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID 342 QVS + + + A LG+ VTP V +G + L++ + +N V A G+ + Sbjct: 995 AQVS---AQGVNTRYVNATLGLRVTPQVTNEGAVLLEVEVQKNEADFVNTGARGDPTILT 1051 Query: 343 KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 402 K +Q+ + G+T +GGI+TR VP DIP G F++ + D+R E+++ Sbjct: 1052 KS-ARSQLLITDGDTAVIGGIYTRNQAINHSKVPWFADIPIIGWFFKNRTERDDRSEMLI 1110 Query: 403 FITPRLVS 410 F+TPR+V+ Sbjct: 1111 FLTPRIVN 1118 >UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadaceae RepID=Q2P6L4_XANOM Length = 649 Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 131/462 (28%), Positives = 225/462 (48%), Gaps = 80/462 (17%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + VT DVPV VLQ +AE+ LN+V S V G V+L L +VPW QAL V+++ GL Sbjct: 187 RPVTFNFQDVPVRTVLQLIAEESNLNIVASDTVQGNVTLRLMNVPWDQALDIVLRAKGLD 246 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRS------ITLQYADAGELAKA 135 R++G ++ W + EQ + A + +ENR + + Y +A + KA Sbjct: 247 KRRDGGVV------WVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNAAVIFKA 300 Query: 136 --------------------------GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQ 169 LS +G + D+RTN L++ D ++ + + Sbjct: 301 LTEAKGIGGGGGSGGGQGGQGGAGQQDNGFLSPRGRLVADERTNTLMISDIPKKVAQMRE 360 Query: 170 WVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGV---------------- 213 ++ +D PV QV + + IV + R+LG ++ + A G + Sbjct: 361 LISHIDRPVDQVLIESRIVIATDTFARDLGARFGIIGATGRGILSGSLDSNTNYLNTSAK 420 Query: 214 --------GQVTTLGSDLSVATATTHVGFNIGRIN---GRL----------LDLELSALE 252 G TTL + L + ++G G G L LD+ELSA++ Sbjct: 421 RASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTNTPGGLAYTLLGSNFNLDIELSAMQ 480 Query: 253 QKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTP 308 Q+ + +++++PR++ ++ + IKQG EI Y +G +V+FKE +L ++VTP Sbjct: 481 QEGRGEVVSNPRIVTANQREGVIKQGREIGYVTISGSGAGGGSQANVQFKEVLLELKVTP 540 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQ-QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 T+ R+ L +++ ++ +++ G V I+++EI T V V GET+ +GG++ Sbjct: 541 TITNDNRVFLNMNVKKDEVARLIDLPLYGTVPEINRREINTAVLVGDGETVVIGGVYEFT 600 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ++ VP LGDIP+ G LF+ G+ E+ EL+VF+TP+++ Sbjct: 601 DRESVSKVPFLGDIPFLGNLFKKRGRSKEKAELLVFVTPKVL 642 >UniRef50_A8PP54 Putative fimbrial assembly protein PilQ n=1 Tax=Rickettsiella grylli RepID=A8PP54_9COXI Length = 442 Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 127/411 (30%), Positives = 217/411 (52%), Gaps = 44/411 (10%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 K +K+TL + + V L+ L+E NL++ + G +S++L DV W QAL ++++ G Sbjct: 33 KDEKITLNFNHINVNAALRYLSELNNNNLIIDEIIQGKLSIYLHDVSWDQALDCILQTRG 92 Query: 80 LITRQ--EGNILSVHSIAWQNNNIARQE---AEQARAQANL-PLENRSITLQYADAGELA 133 L + G ++ N+ +QE ++ + + NL PL + I ++Y A E+ Sbjct: 93 LAKQAIPHGWFITTAE------NLLKQEKVNSDIQKEKNNLCPLIFKVIPIRYRKASEII 146 Query: 134 K----AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 K LLSA+ + D TN L ++D+ ++ + + ++D P+GQ+ + A +V+ Sbjct: 147 KLLKDKANTLLSAQAIVNADNLTNSLWIKDSPVQMNRIIHLIKKLDKPIGQILIEARVVS 206 Query: 190 INEKSLRELGVKWTLADAQHAGGVGQVTT--------------LGSDLSVATATT----H 231 I++ +ELG ++ L+ + + + T L DL + +A + Sbjct: 207 IDQNKEKELGAQFNLSRMRPVNDLLKSTLRNEVSNQNTHLLQHLTMDLPLFSANSLGLAS 266 Query: 232 VGF---NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 +G N+G+ LDLELSALE++ ++I++P L+ + QPA I+ G EIPYQ Sbjct: 267 LGLRLLNLGK--NSFLDLELSALEKEGAAEVISTPHLITADQQPAFIEAGDEIPYQ-EKA 323 Query: 289 ESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 G TS+ FK+AVL ++VTP ++ + RI L L ++Q+ P V+ A I + I+T Sbjct: 324 SGGGTSLIFKKAVLSLKVTPQIMPQERIILDLEVNQDQPNSVMVDAP----TIKARGIKT 379 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRE 399 Q+ VKSGET+ LGG++ + VP LG +P G+LFR + R E Sbjct: 380 QIIVKSGETIVLGGVYEYSQGKLEQRVPFLGSLPLIGRLFRLTKVYNRRSE 430 >UniRef50_Q0EXA5 Probable pilQ; fimbrial type-4 assembly signal peptide protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXA5_9PROT Length = 793 Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 134/438 (30%), Positives = 224/438 (51%), Gaps = 52/438 (11%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 QKVT D+ + L+ +AE N+++S DV G +++ L DVPW QAL ++ + GL Sbjct: 357 QKVTFNYKDIDIRNALKLIAEMSDFNIIMSDDVKGVLTMRLIDVPWDQALDLILSARGLG 416 Query: 82 TRQEGNILSVHSIA-WQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE--- 137 Q GN++ + +A + + AR+EA+Q+ + PLE ITL YA ++ E Sbjct: 417 KEQNGNVVRIAPLAVLKADANARKEAKQS-VEDVAPLETEFITLGYASVNDVKTILEGGS 475 Query: 138 -------------------------------KLLSAKGSMTVDKRTNRLLLRDNKTALSA 166 KLLS +G + +D+R+N +++ D + L+ Sbjct: 476 VKTEVTSAGGAAGGTTGANGTGQTVSSSSELKLLSERGVIMLDERSNTMIITDTRERLNN 535 Query: 167 LEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT-------- 218 +++ +A +D P+ QV + A IV + R+LGVKW + GG T Sbjct: 536 IKRLIAVIDKPMQQVMVEARIVEATDTFSRDLGVKWGGTLNSNGGGYTHTVTGAASAPQN 595 Query: 219 ---LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 LG+ + N L+LELSA E + Q+ +++SPR+ S+LQ A I Sbjct: 596 VVDLGAAVKAGAGGAIGYTLGTLNNALNLNLELSAAEAEGQIKVVSSPRVFTSNLQEALI 655 Query: 276 KQGSEIPYQVSSGESG-ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 +Q +IP+QV++ + S + K A L ++VTP + RI ++L ++++ P + Sbjct: 656 EQDQQIPFQVTTASTPPVVSYQLKSAKLTLKVTPQITADKRIIMQLVVNKDTP---VANT 712 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 G IDK++I T++ VK+GET+ LGGI+T+ + VP L +IP+ G F+ K Sbjct: 713 VGPP-TIDKKQIMTKLLVKNGETMVLGGIYTQTTSDQVNGVPGLQNIPFIGNFFKRKQKV 771 Query: 395 DERRELVVFITPRLVSSE 412 R EL++FITP +++ + Sbjct: 772 RNRNELLIFITPTIIADD 789 >UniRef50_C7LN99 Type IV pilus secretin PilQ n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LN99_DESBD Length = 693 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 124/420 (29%), Positives = 213/420 (50%), Gaps = 34/420 (8%) Query: 12 LIPGVQAAKP-QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 L PG++ +++++ + D V VL+ ++E NL++ D+SG +SL L D+PW QA Sbjct: 286 LFPGMKERYTGERISIDLQDADVEHVLRLISEISGYNLILDDDISGKISLKLVDIPWDQA 345 Query: 71 LQTVVKSAGLITRQEGNILSVHSIA-WQNNNIARQEAEQARAQANL------PLENRSIT 123 L V+ GL +GNI+ + S + + Q+A +A QA + PL+ + Sbjct: 346 LDLVLLQRGLGMVIKGNIMRIASTTKLEAERVQLQKAREAAIQAQVSMQNLAPLKTEYMQ 405 Query: 124 LQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 + Y A E + +L+ +GS++ D RTN L++ D + L ++ ++ ++D QV + Sbjct: 406 INYNTAAEFEGKVKTMLTGRGSVSSDPRTNILIVTDTEDTLKRVDSFIKKLDRAERQVMI 465 Query: 184 SAHIVTINEKSLRELGVKWTLADAQHAGG-------VGQVTTLGSDLSVATATTHVGFNI 236 A +V ++ R LGVKW + A G + G + T G + Sbjct: 466 EARLVYATDEFQRSLGVKWGTSYATETAANLPSEQWRGTFASTG----LNAINTVNGITL 521 Query: 237 GRINGRLLDLELSALEQKQQL-------DIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 G G+ L +L AL+ QL I+SPR+L + A I+QG+++ S E Sbjct: 522 GGTIGKFLGEDLFALDAALQLGEANNLVKTISSPRILTLNNNRAEIQQGTKLATATES-E 580 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 SG T+ E++EAVL + V P + ++ L L IS + P ++DG ID ++ +T+ Sbjct: 581 SGGTTTEYEEAVLKISVLPQITPDNKLILDLEISDDSP-----KSDGR--DIDTKQTKTK 633 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + V ET+ +GG+ S + +P LGD+P G LF++ + EL++FI PR++ Sbjct: 634 MMVSDRETIVIGGVQKTTETSNTNQIPGLGDVPGLGWLFKNTYDAKSKAELLIFIQPRIM 693 >UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SM90_THIDA Length = 745 Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 143/456 (31%), Positives = 230/456 (50%), Gaps = 71/456 (15%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L +V V VLQ +A+ LN+V S V+G ++L L DVPW QAL ++++ GL Sbjct: 286 EKLSLNFQNVEVRSVLQVIADFTGLNIVASDTVTGNLTLRLKDVPWDQALDLIMQTKGLD 345 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAE-QARAQ-ANL-PLENRSITLQYADAGE------- 131 RQ GN++ IA ++ +A+++ E +A+ Q A+L PL I L Y A E Sbjct: 346 KRQNGNVIW---IAPRDELLAKEKLEFEAKKQVADLEPLVTDYIQLNYLRADEAQTMLYG 402 Query: 132 ------LAKAG------------------------------EKLLSAKGSMTVDKRTNRL 155 L AG +K+L+ +G T + +TN L Sbjct: 403 FASGAFLNSAGNNAVNCSTQAQGLGGAAVAQAMQKGEGDTDQKVLTKRGRATYELKTNTL 462 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW--TLADAQHAGGV 213 ++ D + ++ + +A++D+P QV + A +V + RELGV+ L A + Sbjct: 463 IITDTASKIAEVRGLLARLDVPARQVMIEARVVIADSLWSRELGVRLGTRLFKATGRDNI 522 Query: 214 GQVTTLGSDLSVATATT----------HVGFNIGRI--------NGRLLDLELSALEQKQ 255 G TL S+A T VG G+I NG LL LELSALE Sbjct: 523 GVGGTLNESASIAAGGTPTVTPQVELGTVGAAAGQIAMSLLNASNGNLLSLELSALEADN 582 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGR 315 + I+++PR++ S+ +PA I G++IP+ + +V FK+A L + V P +L Sbjct: 583 RGKILSNPRVMTSNQKPAVILNGTQIPFITPGTANSPATVTFKDAFLCLLVDPQILNNDA 642 Query: 316 IRLKLHISQNVPGQVLQQADGEVLA--IDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 + + + + ++ +++A I + I+TQV V +GETL LGGIF + + D Sbjct: 643 LIMTIEVQKDAIDTANAAVGADIIAPAIATRRIKTQVRVNNGETLVLGGIFDQTEFNNVD 702 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VP LGD+P G LF+ K+D++ E++VFITPR++ Sbjct: 703 KVPFLGDVPGLGNLFKRTNKQDQKTEMIVFITPRIL 738 >UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMQ3_PELPD Length = 864 Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 121/408 (29%), Positives = 202/408 (49%), Gaps = 33/408 (8%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +KVTL D V ++ Q L+E N V+ DV+GT+S+ L +VPW QAL ++ + L Sbjct: 470 RKVTLEFADAEVRKIFQLLSEVSNKNFVLGDDVTGTISIKLVNVPWDQALDIILDAKDLE 529 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 TR+ GN+L++ + +Q ++ Y+DA + E LL Sbjct: 530 TREIGNVLTIKKRGAFKEQLVKQTT-----------YTEYFSVNYSDAKSIKPQLEALLD 578 Query: 142 AK------GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 ++T D RTN +++ ++ + + + +MD+P QV + A IV Sbjct: 579 PVLLKEKLATITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQVMIEARIVEATSTFT 638 Query: 196 RELGVKWTLADAQHAG---GVGQVTTLGSDLSVATATT--------HVGFNIGRI-NGRL 243 R LGV W + +G G+ Q+ T ++ A T+ ++G + G + NG Sbjct: 639 RSLGVNWGVHYTDASGSLLGITQLDTGFGGITTAPPTSGTGDSAGGNMGISFGALGNGVQ 698 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLG 303 LD+ LSA + II+ P++ + + A I QG +IPY S G++ T +F EA L Sbjct: 699 LDMRLSAAATAGLIKIISCPKVATLNNKKAKIAQGQQIPYTASDGDNVET--KFVEAALS 756 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 +EVTP + G I + + + G + + AI+ +E T++ ++ GET +GGI Sbjct: 757 LEVTPHINANGTISMNIVAKNDSMGDAVGSSTAP--AINTKEATTEMLLRDGETTVIGGI 814 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 F + VP L DIP G+ F+ + K + EL+VFITPR++++ Sbjct: 815 FVDTDNDSDAGVPFLMDIPAIGKFFKTNSKTKTKTELLVFITPRIMAT 862 >UniRef50_B5YJ50 PilQ n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJ50_THEYD Length = 663 Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 121/423 (28%), Positives = 216/423 (51%), Gaps = 38/423 (8%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + ++L + D + V + L + N+V+ PDV G V+L L +VPW+QA+ + K+ L Sbjct: 247 KTISLDLQDADIVGVFRLLGDIGGYNIVIHPDVKGKVTLKLINVPWQQAVDVICKTFQLE 306 Query: 82 TRQEGNILSVHSIA-WQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE--K 138 EGNI+ + + +Q E + +A + R L+YA ++ E K Sbjct: 307 KTFEGNIIRIAPVKIFQEEKKLEAETKDLFKKAE-DEQIRIFVLKYASVDKVKGTIEAAK 365 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 +LS KG+++ D+RT +++RD + L + + VA +D P Q+ L A I+ ++ + L Sbjct: 366 ILSPKGTISTDERTRTVIIRDIPSVLGHIARLVADLDKPTRQILLEARIIEMSSSFSKSL 425 Query: 199 GVKWTL---------------------ADAQHAGGVGQ--VTTLGSDLSVATATTHVGFN 235 G +W + + + GG + S +V + TT F Sbjct: 426 GFEWGIQWYPPGTRTTIVGSVGAAAGSSASSVPGGTAPLAINLPASTGNVTSPTT--AFT 483 Query: 236 IGRINGR---LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 IG +N LDL +SAL+Q + +I++P+++ Q A I QG+ IPY +SG Sbjct: 484 IGYLNPSQTIALDLRISALQQSGKGKVISNPKVITLDNQKAKIVQGASIPYGEKDVQSGQ 543 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD-GEVLAIDKQEIE--TQ 349 S +FK+ + +E TP ++ + L + + + +++ + G V A +IE T+ Sbjct: 544 ISTKFKDVAITVEATPHLIDDKSMLLDVSVIKE---DLVEFVNIGGVYAPRTTKIEGNTK 600 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V +K GETL +GGI+ + + + VP LGD+P G+LF+ G+++ E+++F+TPR++ Sbjct: 601 VSLKDGETLVIGGIYKKTDSLTESKVPGLGDVPLLGELFKSRGRDETLYEVMIFVTPRIL 660 Query: 410 SSE 412 E Sbjct: 661 KYE 663 >UniRef50_Q1IRM5 Type II and III secretion system protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM5_ACIBL Length = 808 Score = 173 bits (439), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 126/425 (29%), Positives = 212/425 (49%), Gaps = 43/425 (10%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + +++ + DV + + + E LN+V+ P V GTV+L L DVPW QAL V+++ GL Sbjct: 392 EPISVNLKDVDLKDFFRLIHEISGLNVVLDPSVKGTVTLVLDDVPWDQALDIVLRNNGLD 451 Query: 82 TRQEGNILSVHSI-AWQNNNIARQEAEQARAQANLPLENRSIT--LQYADAGELAKAGEK 138 + +GN+L + SI + +AR++ +A+A L ++ ++T L YA + +L +K Sbjct: 452 RQLDGNVLRIASIETLRTEAVARRQQLEAQA---LAVDKVTVTRFLSYARSADLVPTLKK 508 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 LSA+G + D R N L++ D + +L++ ++Q+D +VE+ A +V +REL Sbjct: 509 FLSARGDIIADGRMNALVISDIPGVIPSLDRLISQLDRKTQEVEIEARVVAATRTFVREL 568 Query: 199 GVKW---------TLADAQHAG--------GVGQVTTLGSDLSVATATTHVGF------- 234 G++ +++ +AG GQ T G+ ++T F Sbjct: 569 GIQLGGGWGGASTSVSGNPNAGFGSTNFKNPAGQPIT-GAPFPISTTGAFPLFTNFQVLN 627 Query: 235 --------NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 NIG G LDL LSA EQ+ L I++ PR++ + A ++QG +P Sbjct: 628 PTAGLELINIGHSYG--LDLYLSAAEQRGLLKILSRPRVVTQNNVTALVRQGFRLPVVTL 685 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 S +G +V + +A L + VTP + + I L + + P +L Q+ Sbjct: 686 SQLNGPPTVTYVDAFLRLTVTPQITVENTIFLAVDVENTTPDFTRTVLGNPILL--TQQT 743 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 TQV V G T+ +GG+ +N VP+LGDIP LF H + +EL+ FITP Sbjct: 744 TTQVLVTDGGTVTIGGVVQTQNTLTSQEVPILGDIPILKYLFMHKTTNTQTQELIFFITP 803 Query: 407 RLVSS 411 ++V + Sbjct: 804 KIVQT 808 >UniRef50_Q6MPI6 Fimbrial assembly protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPI6_BDEBA Length = 726 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 119/404 (29%), Positives = 207/404 (51%), Gaps = 21/404 (5%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K+++ ++ + L + E+ +N+V+S DV G VSL L VPW QAL ++K+ L Sbjct: 313 KKISIETSNMDIRDALNFITEESGVNMVISEDVKGAVSLKLRQVPWDQALVVIMKAKKLG 372 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQ-ARAQANL-PLENRSITLQYADAGELAKAGEKL 139 ++GN+L + + Q+ +A + A+A+ NL PL+ R + YA EL K + Sbjct: 373 YTRQGNVLRIAPL--QDLKAEEDDATKLAQARKNLEPLKVRMFPVSYAKVDELEKKIKDF 430 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 L +G + D RTN L++ D + L + +A +D QV + IV E R +G Sbjct: 431 LGDRGRVVGDVRTNALVVTDIEENLERAARLIASLDTQPAQVSIEGKIVEAKESFTRNIG 490 Query: 200 VKWTLADA------QHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDL--ELSAL 251 V W+ A G V + + S A ++ + FN+ N LD+ LSA Sbjct: 491 VNWSATGAPIKLGSTARGPVNMNPSFNVNQSAAGSSGALNFNL---NVGTLDIFGTLSAA 547 Query: 252 ----EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ--VSSGESGATSVEFKEAVLGME 305 E ++Q+ II++PR++ + A I Q +E+P + +G + + +FK L +E Sbjct: 548 LALNESEEQVKIISAPRIMTLSNEKADINQTTEVPVRQVTQNGTATQETFQFKPLTLKLE 607 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 VTP V G + +K+ +++ G + A A++ +E T+V VK+G+T +GGI+ Sbjct: 608 VTPQVTADGSVIMKVLVNRQFRGADVSSAGQGAFAVNSREANTRVLVKNGQTAVIGGIYQ 667 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+ VP ++P+ LF+ E+ EL++F+TPR++ Sbjct: 668 SDATDGEVGVPWFRELPFVSYLFKTKNISKEKSELLIFLTPRIM 711 >UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVZ8_9DELT Length = 504 Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 124/420 (29%), Positives = 212/420 (50%), Gaps = 55/420 (13%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 +VTL + PVA +L+AL+ N++VS V GT +L++ DVPW QA ++++ S GL Sbjct: 102 RVTLNMQQAPVATILRALSRIADQNIIVSETVEGTANLNIRDVPWDQAFKSIIASQGLSY 161 Query: 83 RQEGNILSVHSI---------AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 EG IL + S+ A +I R+ + A+ PL +R + L YAD +L Sbjct: 162 VWEGEILRIKSMQDLQHELDRAGLKEDIGRR---KLAAELTAPLMHRIVKLNYADPEKLQ 218 Query: 134 KAGEKLLS------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 + LS GS+ VD+ TN L+++ + + + + + +D P Q+ + A+I Sbjct: 219 DNLIRFLSRDGDGEPHGSIVVDEETNSLMIQATRNDMERVHKAINHLDRPRPQILMEANI 278 Query: 188 VTINEKSLRELGVKW-----TLADAQHAGGVGQV------TTLGSDLSVATATTHVGFNI 236 V +++ RELGV+W T + G G + T DLSV +A Sbjct: 279 VEATQRTARELGVRWSGRYVTPLSFEDEVGFGDLLRDEAGYTGDMDLSVISA-------- 330 Query: 237 GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 R+ G +L L ALE+ +++I+ SP + Q A + G +PY+ + E G+ +VE Sbjct: 331 -RLPGSVLYAHLQALERDGEVNILTSPSITTMDNQMAFTEHGQRVPYE-TVDEDGSRTVE 388 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHI-------SQNVPGQVLQQADGEVLAIDKQEIETQ 349 F++AVL +EV P+V++ +++ + + +++V GQ + I + ET Sbjct: 389 FEDAVLRLEVVPSVMEGNHLKMDIRVNKDEVDFTRDVRGQPV---------IRTKHTETN 439 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + V+ GET+ + G+ + V L D+P G LF+ +E E E ++FITP ++ Sbjct: 440 LVVRDGETIVISGLSKETLSDTERGVMGLRDLPGLGWLFKSREQEQEMEEFLIFITPTIL 499 >UniRef50_C0QLC9 PilQ n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLC9_DESAH Length = 727 Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 125/405 (30%), Positives = 206/405 (50%), Gaps = 26/405 (6%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQTVVKSAGL 80 +K+ L + + V + L N V DV+G+V++ L VPW Q V+K L Sbjct: 331 EKIRLDFYETDIKNVFRILQSVSGKNFAVDKDVTGSVTISLDKPVPWDQVFDLVLKMNRL 390 Query: 81 ITRQEGNILSVHSIAW-------QNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 QEG+I+ + +++ + + I +A + ++ PL I + Y+ A Sbjct: 391 GQIQEGSIVRIATLSTLAQEQKQKQDAITAHKATLEQRKSLEPLVTEYIPINYSSAETDV 450 Query: 134 KAG-EKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 K EK+L+ +G ++VD RTN ++L D + + ++ + ++D Q+ +SA +V +N Sbjct: 451 KPHLEKILTPDRGVLSVDSRTNMIILTDVREKIDQAKELIHRLDKVTPQIMISARVVEVN 510 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTT--LGSDLSVATATTHVGFNIGRINGR--LLDLE 247 + + LG+ W+++ G + + SD S+ GF+ RI G LD Sbjct: 511 KNFSKSLGIDWSVSKNNANSGFDVIMNYPVASDGSL-------GFDFSRIFGTELALDAT 563 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 LSA E K + II+SP++L + A IKQG E Y + +SG +SV FK L +EVT Sbjct: 564 LSASEIKGDVKIISSPKILTLDNKKAKIKQGLEYAY-LERDDSGGSSVLFKNIDLLLEVT 622 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 P V RI + + I++N V+ DG V ++ E ET++ V G T+ +GGI Sbjct: 623 PHVTPDNRIGMSVLITKNDLASVV---DG-VPSLSTNEAETELLVNDGNTIVIGGIVKNT 678 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + + + P L +IP G+LF D ED + EL++FITP +V E Sbjct: 679 SSTSETGFPGLSNIPLLGKLFGSDSTEDTKNELLIFITPTIVQLE 723 >UniRef50_D0LHN1 Type IV pilus secretin PilQ n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHN1_HALO1 Length = 1269 Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 137/419 (32%), Positives = 209/419 (49%), Gaps = 37/419 (8%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 K+ L + +V + V++ LA+ +N+VV +VS V++ L VPW QAL+ ++ S GL Sbjct: 850 KIDLDLQNVDIHNVMRLLADVGGINIVVPDEVSAEVTVRLRQVPWDQALEVILASKGLWY 909 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQAR-AQANLPLENRSITLQYADAGELAKAGEKLLS 141 R+EGN+ + + + + A +A P E + TL YA A +L E LLS Sbjct: 910 RREGNLYRIATRKQLDAEAEAEAERIAALIKAEAP-EPQIFTLNYAVASQLKPQLEALLS 968 Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVK 201 KG + +D+RTN L++ D + + + + ++D Q+++ A IV RE GV+ Sbjct: 969 PKGRIEIDERTNSLIINDVRAHRTRIIDLLTRLDTQTPQIQIEARIVEARSTFAREFGVQ 1028 Query: 202 W--TLADAQHA----------GGVGQVTTLGSDLSVATATTHVGFNI------------- 236 W +L DA GG T+G+ VA A+ N+ Sbjct: 1029 WGGSLLDANTGLVFPGNYGVVGGNTDSQTVGT--GVAAASPDFAVNLPAATGTGAGGALG 1086 Query: 237 ---GRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 G + G L L L LSALE + II++P++ + A I QG IP V S + Sbjct: 1087 FAFGSVGGGLNLTLRLSALEDTGTVRIISAPKITVLNNVEAEISQGVSIPISVIS--ANG 1144 Query: 293 TSVEFKEAVLGMEVTPTVLQK-GRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 +F +A L +EVTP V Q+ I + L I +N V A G+ I ++E T V Sbjct: 1145 VQTQFVQADLSLEVTPHVSQRDCSIAMDLQIQKNEADFVNTGARGDP-TILRKEASTTVL 1203 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 V ET +GGI+TR + VP LGD+P G LF++ + DER E++VFITPR+ + Sbjct: 1204 VADNETTVIGGIYTRNSGLSYSKVPFLGDLPLLGWLFKNRRENDERTEVLVFITPRITN 1262 >UniRef50_A6W2T5 Type II and III secretion system protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2T5_MARMS Length = 393 Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 118/413 (28%), Positives = 207/413 (50%), Gaps = 32/413 (7%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH 61 K+ LL+ G A++ + + + + +VL LA Q ++V+SP++ ++L Sbjct: 3 KRLYYGLLVFFFLG--ASRVLAMDVYFESRSLQEVLPWLASQMNESVVISPEIDDVLTLS 60 Query: 62 LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP----L 117 + D WK ++ + + + + WQ + + A + P Sbjct: 61 IKDASWKDVMEAIAQLPHI------------QLEWQGHVAVLMPVKTPLADSTEPTSVMC 108 Query: 118 ENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 + L++A A ++ + L S+ VD RTN ++ + T+ +++ + +D P Sbjct: 109 QRAYWVLKHAKAKDVG-VHLRALHPSISLVVDDRTNSIIAH-SCTSFEGIQETLDWLDTP 166 Query: 178 VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIG 237 + Q+E+SA I ++ + + GV W A+ + GV DL T TT + F+ Sbjct: 167 LKQIEISAQIAQVSRTAQSQFGVNW---QAKLSDGVRSSIGGAVDLGALTPTTSLDFS-- 221 Query: 238 RINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 I G LL L L +E + ++++ P+++ S PA I+ G+E+PYQ S + S+E Sbjct: 222 SIGGSGLLALTLDMMESEGLANVVSKPKIVTSEGLPARIESGTEVPYQTVSDDK--VSIE 279 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 F++AVL +EVTP V G I L L I Q+ G ++ V ++ ++TQV VK+ E Sbjct: 280 FRQAVLMLEVTPFVKDSGHILLSLTIHQDSVGDLVNG----VPSLKTNRLKTQVVVKNQE 335 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 TL LGG+F + + VP DIPW G+LF+ ++ E+ EL+VFITP+L+ Sbjct: 336 TLVLGGVFREERFESESRVPFFSDIPWLGELFKRQSEQQEKVELLVFITPKLL 388 >UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FD61_DESAA Length = 566 Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 123/452 (27%), Positives = 216/452 (47%), Gaps = 68/452 (15%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 Q VT+ + D V VL+A+A NL+++ +VSG VS+ + VPW + +++ S GL Sbjct: 95 QPVTMRMKDSEVGVVLRAIARGVGQNLLINSNVSGRVSVEVKAVPWNEVFLSILNSQGLR 154 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANL------PLENRSITLQYADAGELAK- 134 EG+I+ + + ++A Q+ ++ + L PL + + + YAD L + Sbjct: 155 YAWEGDIIRIMTAEDMEKDLAVQQVQERTKRQKLVAKSVEPLLMKVVQIDYADPEGLVEP 214 Query: 135 --------AGEKLLS----------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 AGE S +GS+ VDK N L+L + L + + ++D Sbjct: 215 LNSILATSAGENAASKSKNDKSGSVVRGSVDVDKHNNSLVLMAVREDLEKMLALINKLDR 274 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLA---------------------------DAQH 209 P QV + A+IV + R+LGV+W DA Sbjct: 275 PPYQVHIKANIVETTRDTARDLGVQWGWMYGRYDSLGNDTDFWLTPGGNSGSAASRDAPL 334 Query: 210 AGGV------------GQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQL 257 GG G D A T +G G++ +L+++LSAL ++ Sbjct: 335 TGGYTAGTGSKGVSGQGNGINFPVDFEDAMGAT-MGLMFGKVGSNILEVQLSALADAGKI 393 Query: 258 DIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIR 317 +I+++P + Q AS + G+E+PY V+ E G V+FK+A L +E+TP V+ +G+++ Sbjct: 394 NILSTPSITTLDNQTASTENGTEVPY-VTINEDGDREVKFKDATLMLEITPHVIDEGQMK 452 Query: 318 LKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 +K+ I ++ + + DG + K+ ET + V++GET+ + G+ +N G +P Sbjct: 453 MKVSIKKD-EVDLSRNVDGNPFIL-KKRTETSLIVRNGETVVISGLSKTRNTEGDTGIPW 510 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 L DIP G LF+ + K + E+++F+TP ++ Sbjct: 511 LKDIPGLGYLFKSESKSEAMEEVLIFLTPTVL 542 >UniRef50_P03668 Putative assembly protein ORF430 n=1 Tax=Pseudomonas phage Pf3 RepID=VG430_BPPF3 Length = 430 Score = 167 bits (422), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 135/425 (31%), Positives = 222/425 (52%), Gaps = 28/425 (6%) Query: 1 MKQWIAALLL--MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV 58 M + I AL+L L+P A+ ++T+ ++ + + +A+ ++V+ P + G V Sbjct: 1 MIRSIIALMLSFALVPFAFAS--DRLTVKHHEIDIRVAIPLVADFCGRSVVLGPSIQGVV 58 Query: 59 SLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARA------Q 112 SL DVP QA +++S L++ G++L + ++ N + ++A+ R Sbjct: 59 SLDFDDVPCSQAFDLLLESNHLLSSMVGDVLVITAMDQVLN--SERKADDLRTFRRDLFN 116 Query: 113 ANLPLENRSITLQYADAGE---LAKAGEKLLSAKG-SMTVDKRTNRLLLRDNKTALSALE 168 AN +E R I + +A A E L K L A G SMTVD+RTN + + ALE Sbjct: 117 AN-DIERRVINIVHASASEVVSLFKESFMSLDAPGMSMTVDERTNSVFAALPSSFFPALE 175 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATA 228 + +D+PV QV + A++V + + LG+ W A G VT DLSVA A Sbjct: 176 SVIQAIDVPVRQVAIEANVVEASVDWSKRLGLNW--GGALSLGNWSAVT--AGDLSVA-A 230 Query: 229 TTHVGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS 287 + +GF G ++ L LD +A+E + +++ P LL Q AS+ +G+E+PYQ S+ Sbjct: 231 GSSIGF--GFLSNTLSLDGLFTAMENEGNGRVVSRPTLLTLDRQSASVLRGTELPYQQSA 288 Query: 288 GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIE 347 G+ GATSV FK A L +EV P + I +++ +S++ P A V ID + Sbjct: 289 GD-GATSVAFKHAALSLEVKPVISPDNSIVIEVLVSRDSPN--FSNAIDGVPPIDTNRLV 345 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 T + V G+T+ LGG+++ N+ G V + IP G+LF+ E+ EL++F+TPR Sbjct: 346 TTIRVPHGQTVVLGGVYSTINQQGSSRVSGISRIPGIGRLFKKKEHVTEQYELLIFLTPR 405 Query: 408 LVSSE 412 ++ E Sbjct: 406 ILGLE 410 >UniRef50_A3YI86 Type IV pili biogenesis protein PilQ n=1 Tax=Marinomonas sp. MED121 RepID=A3YI86_9GAMM Length = 390 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 126/413 (30%), Positives = 211/413 (51%), Gaps = 34/413 (8%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 K W LI +Q++ + + V D + L LA Q +L+++P ++ +SL Sbjct: 3 FKAWCC-----LILWLQSSYLYAMDVQVKDKDIQDFLPWLAAQTDNSLILNPAINANLSL 57 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 L +V W+ + G I Q L+ W A ++A++ + P++ R Sbjct: 58 SLRNVNWRDLM-------GFIAAQHELTLT-----WAEET-AVLMPKKAKSLDSKPVKER 104 Query: 121 S----ITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 +++A A ++++ K+L K ++ D RTN ++ +D + LE V +D Sbjct: 105 CEAKFWHIEHALAEDVSR-HLKILYPKLVLSYDNRTNSIISQDCHASPQLLEM-VRWLDS 162 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI 236 P+ Q+E+SA I + ++GV+W Q AG + DL+ ++T+ + F + Sbjct: 163 PLRQIEISARIAQVQNAVESQIGVEW---QGQLAGDTLSTASGLVDLATTSSTSGLSFAV 219 Query: 237 GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 + + LL L LS LE +I++ P+++ + Q A I+ G+E+PYQ S E T VE Sbjct: 220 AK-SDDLLALNLSFLESNGLANIVSEPKIVTAEGQMAKIESGTEVPYQTSDDE--GTHVE 276 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 FK+A L +EV P V Q +++L L I Q+ G++ V +I+ I TQV V + E Sbjct: 277 FKQAGLTLEVIPFVKQGDKVQLSLKIYQDAVGEMY----NGVPSIETNRINTQVLVGNQE 332 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 TL LGGI+ + VP GD+P+ G LFRH + E+ EL+VFITP+L+ Sbjct: 333 TLVLGGIYRDEVWESTSKVPFFGDLPFVGALFRHQAQRQEKVELLVFITPKLL 385 >UniRef50_A1WZA7 Type II and III secretion system protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZA7_HALHL Length = 372 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 106/304 (34%), Positives = 167/304 (54%), Gaps = 19/304 (6%) Query: 120 RSITLQYADAGELA---KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 R++ L +A+A +LA + +LS G +VD+RTN L+L+D L EQ V ++D Sbjct: 44 RTLPLVHAEAAQLAELLRDETGVLSESGHASVDERTNTLILQDTPARLEEAEQLVRELDR 103 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGS-----------DLSV 225 QV + A IV + + RELG + L+ + G + GS +L Sbjct: 104 ANRQVMIEARIVLASGEYSRELGSRLGLSSERGDGHFAFDSLPGSNDAAVGDGLLAELPP 163 Query: 226 ATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 + ++G + RLL LELSA+E + +++SPR+L + Q A I+QG +IPYQ Sbjct: 164 VGEGARLSVSVGEVGERLLQLELSAMEAEGHGRVVSSPRVLTTERQAARIEQGVQIPYQ- 222 Query: 286 SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQE 345 + ESGAT+V F++A L + TP V + + L L ++++ GQ+ + V +ID Q Sbjct: 223 ETAESGATAVAFQDAALSLTATPQVTEDDAVSLALRVTKDAVGQIYEG----VPSIDTQA 278 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 + T + V++GET+ LGG+ + + + VP LG++P G LFR E EL+VF+T Sbjct: 279 VTTHLRVQAGETIVLGGVREHEQRKQRQRVPWLGELPLIGWLFRQRMSEQSHHELLVFVT 338 Query: 406 PRLV 409 PRLV Sbjct: 339 PRLV 342 >UniRef50_B8DPS5 Type II and III secretion system protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPS5_DESVM Length = 552 Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 122/442 (27%), Positives = 213/442 (48%), Gaps = 54/442 (12%) Query: 16 VQAAKP---QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 V+ A+P VTL + +V V L++LA N+++SP V G+V++++ VPW + Sbjct: 76 VEQARPLPSVPVTLKLHNVDVGVALRSLAAAAGKNIILSPGVKGSVNVNVNRVPWSDVFK 135 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL------PLENRSITLQY 126 ++ S GL +G ++ V ++A + + E R L P+ + ++Y Sbjct: 136 GMLDSNGLDYAWQGELIKVITMADKKVELEHATLENQRMAQKLKGRKVGPMVTTVLDVRY 195 Query: 127 ADAGELAKAGEKLLSAK------GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 A+A EL K E LS GS+ VD TN L+++ + L V+ +D P Q Sbjct: 196 AEAAELKKNLEGFLSKDDGGKPVGSVVVDTFTNSLIIQAVEDDQKKLMTLVSNLDKPRAQ 255 Query: 181 VELSAHIVTINEKSLRELGVKW------------------------------------TL 204 ++L AHIV +++ RELG++W + Sbjct: 256 IQLKAHIVEATKETARELGIQWGGVNRVGNMAGSNDLWVTPGGTGGTAGTSPYNGSYTPI 315 Query: 205 ADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPR 264 A G G D + + +G G I G +L+++LSAL++ +++I++SP Sbjct: 316 FGAPGISGQGNGINFPIDTTGKSGAGSLGLMFGTIGGNMLEMQLSALQESSKINILSSPS 375 Query: 265 LLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQ 324 + Q A + G ++PY VS+ G V+F++AVL +E+TP V+ ++LK+ + + Sbjct: 376 ISTLDNQMAYTENGEKVPY-VSTNAQGDREVKFEDAVLRLEITPHVIDDKNLKLKVLVKK 434 Query: 325 NVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWF 384 + + + +G I KQ ET + V+ GET+ + G+ + +G+ VP L D+ Sbjct: 435 D-EVDLTRTVEGNPFIIKKQ-TETTLIVQDGETIVISGLTKDRKSTGRSGVPGLHDVEGL 492 Query: 385 GQLFRHDGKEDERRELVVFITP 406 G LF D K + E+++FITP Sbjct: 493 GWLFGSDSKASKLEEVLIFITP 514 >UniRef50_C8X4Y6 Type IV pilus secretin PilQ n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4Y6_DESRD Length = 719 Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 127/414 (30%), Positives = 210/414 (50%), Gaps = 24/414 (5%) Query: 12 LIPGV-QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 L PG+ + + +++ + D V VL+ LA NL++ V G++SL L +VPW QA Sbjct: 313 LFPGMDRNYSGETISIDLQDADVEHVLRLLASMADKNLIIDEGVQGSISLKLEEVPWDQA 372 Query: 71 LQTVVKSAGLITRQEGNILSV---HSIAWQNNNI--ARQEAEQA--RAQANLPLENRSIT 123 L V+ + L + GNI+ + +++A + I ARQ+A +A + Q PL+ I Sbjct: 373 LDLVLLQSDLGMVERGNIIRIAPANTLAEERERIRQARQKALEAQQKIQELEPLQTEFIQ 432 Query: 124 LQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 + Y A L ++ LS +G + D RTN L++ D + + + + ++D P QV + Sbjct: 433 INYTTASALRPQLQEFLSERGRIGQDARTNTLIVSDTRDNIRKVRSVIDRLDRPEPQVLI 492 Query: 184 SAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGS-----DLSVATATTHVGFNIGR 238 A IV + R LGV G VGQ S + +T ++ + + Sbjct: 493 EARIVYAKDAFKRSLGVSLAGEYYDDVGAVGQYEKSLSAGVLQGFTPEVSTVNMQGALDK 552 Query: 239 ING---RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSV 295 I+G LD +L E K I+SPRL+ + Q A I QG +I + S ESG T + Sbjct: 553 ISGIDLFELDAQLKLGELKGVTKTISSPRLVTLNNQQAEISQGIKIANE-SESESGGTDI 611 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 E+ EA L + V P + ++ L L I+ + P + +GE I+ + T++ V++ Sbjct: 612 EYTEATLKLAVQPQITPDDKVILDLDIADDSPTE-----NGE--DIETRTARTKLLVENQ 664 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ET+ LGG++ + ++ VP LGD+P G LF+ D +E REL++FI P ++ Sbjct: 665 ETVVLGGVYQVIENNEKNQVPGLGDVPLLGWLFKTDNVNNENRELLIFIRPTIL 718 >UniRef50_B6J4A2 Type 4 pili secretin (Outer membrane porin) n=5 Tax=Coxiella burnetii RepID=B6J4A2_COXB1 Length = 353 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 106/297 (35%), Positives = 173/297 (58%), Gaps = 18/297 (6%) Query: 122 ITLQYADAGELA------KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 I + YADA LA K+G +LS G D RTN+L + + +T + ++ V+Q+D Sbjct: 44 IPIHYADAKLLAAFLNSKKSG--ILSKFGYAAADVRTNQLWILEEQTHIYLIQSLVSQLD 101 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKW--TLADAQHAGGVGQVTTLGSDLSVATATTHVG 233 +P+ QV + A I++I++ +L LG+ + +AQ G+ + S + A + Sbjct: 102 IPIHQVLIKARIISISDHNLHSLGILFGTKTNNAQSNDGLIE-DKPNSTIQFGVADIPI- 159 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 I NG+LLDL LSALEQ+ + +++ P L+ ++ Q A I+ G IPYQ +G+ G T Sbjct: 160 --IKFKNGQLLDLTLSALEQEGRAQVLSCPELMTNNRQTAIIESGEAIPYQEKTGQ-GNT 216 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 SV F +A L ++VTP VL RI L+L+++Q+ L +G V I Q++ T+V V Sbjct: 217 SVTFNKATLRLKVTPVVLPGNRILLQLNVNQDKMSSFL--VNG-VPTIQTQQLTTKVMVN 273 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + ET+ LGGI+ + + + +P L IP G LFRH + ER++L++F+TP+++S Sbjct: 274 NQETVVLGGIYEQSTQQEEAGIPGLHKIPILGGLFRHRQRSSERKQLLIFVTPQIIS 330 >UniRef50_B3TCB2 Putative bacterial type II and III secretion system protein n=2 Tax=environmental samples RepID=B3TCB2_9ARCH Length = 648 Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 127/414 (30%), Positives = 217/414 (52%), Gaps = 30/414 (7%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +K++L + V + + AE N+++SP+V G+V++ + DVPW QA++ ++ ++ L Sbjct: 240 EKISLDFQNADVRNLFRIFAEISGFNVILSPEVGGSVNIRMIDVPWNQAMEIILTNSAL- 298 Query: 82 TRQE--GNILSVHS-IAWQNNNIARQEAEQARAQANLPLENRS-------ITLQYADAGE 131 R+ GNI+ V + + + AR +E+ RA + E S + + +AD E Sbjct: 299 GRECFGGNIVRVATKVTLAAEDTARL-SEKTRAVSERLNERDSEDLVTEVVRVNHADITE 357 Query: 132 LAKAGEKLLSAKGS--MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 L+ + L SA+ +T+D RTN L+L D + + + + + +D+ QV + A IV Sbjct: 358 LSTSLNALKSARKDALITIDTRTNTLILNDLRHHVDDMLETIKILDISTPQVLIEAKIVE 417 Query: 190 INEKSLRELGVKWTLADAQH-----AGGVGQVTTLGSDL--SVATATTHV-GFNI---GR 238 I++ +ELG+ W L + + G T DL +V AT +V GF+ G Sbjct: 418 ISKTFSQELGISWGLVNPEPGFPTVTGNSTFDTQFLVDLRPTVDIATGNVAGFDSLIQGF 477 Query: 239 INGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 + G + L++ L ALE+ + +I+SPR+ + + A + G +IPYQV+S E S++F Sbjct: 478 LPGNIALNVRLEALEKSGKGRVISSPRVTTADNKEARVLSGRDIPYQVNSVE--GNSIQF 535 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 A L + VTP V I + + ++N Q A G + I ++E+ T+V V +GET Sbjct: 536 VNAELSLTVTPHVTSDNSIYMTIDATKNA-ADFAQLAAG-IPTITRKEMHTEVLVGNGET 593 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 L GI+ + + +VP +P G LFR +D EL+VFITP +V + Sbjct: 594 TVLAGIYESTSTENKKAVPWFSKLPLVGFLFRAFDDKDTINELLVFITPTIVET 647 >UniRef50_A8ZSX5 Type IV pilus secretin PilQ n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSX5_DESOH Length = 987 Score = 160 bits (404), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 118/405 (29%), Positives = 208/405 (51%), Gaps = 37/405 (9%) Query: 33 VAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQTVVKSAGLITRQEGNILSV 91 + V++ L + N + DVSG+V+L + VPW Q L +++ L + I+ Sbjct: 589 IRNVIRILKDVSGKNFAIDDDVSGSVTLSFVNPVPWDQVLDLILEMNNLGMVEADGIIR- 647 Query: 92 HSIAWQNNNIARQEAEQA---------RAQANL-PLENRSITLQYADAGE-LAKAGEKLL 140 IA Q + ++E+E+A +A+ L L ++ YA+AGE + E LL Sbjct: 648 --IATQATLVQQKESEKAALTAQQDMKKAEETLASLVTEYFSISYANAGEDILPHIEGLL 705 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S +G VD RTN++++ D + + + +A++D QV + A IV + RE G Sbjct: 706 SDRGHAKVDNRTNQVIMTDVEEKVEKAREIIAKIDKVTPQVMIKARIVETSSSFSREFGT 765 Query: 201 KWTLADAQHAGGVGQVT----------TLGSDLSVATATTHV----GFNIGRINGRL--L 244 +W + + ++ + T T D+++ + ++ V G N RI G L Sbjct: 766 EWGIDNRYNSPNINIGTDGAYRDEMGGTYTYDVALNSLSSPVQNLIGINFARIIGTPFSL 825 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGM 304 D +LS +E + II++P+++ + A+I QG + PY V E G V++K L + Sbjct: 826 DAKLSLMESTGDVKIISTPKVVTLDNKTATISQGIDYPYTVV--EDGEADVKWKTIDLNL 883 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 +VTP V RI +KL+I +N G+++ +GE + + + T++ V G+T+ +GGI Sbjct: 884 DVTPHVTPDDRISMKLNIQKNDVGEII---NGE-QSFNTKRASTELLVNDGDTVVIGGII 939 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + +G+ VP + IP G LF++ + DE+ EL++FITP +V Sbjct: 940 KEREGAGERGVPWISKIPVLGNLFKYKTRSDEKSELLIFITPNVV 984 >UniRef50_Q2LWT2 Type IV secretion n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWT2_SYNAS Length = 590 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 117/426 (27%), Positives = 200/426 (46%), Gaps = 87/426 (20%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 QK++L D + VL+ LAE +++V PDV G+V++H+ DVPW QAL+T++ GL Sbjct: 202 QKISLDFQDADIRAVLRLLAETGGVSIVAGPDVKGSVNVHMRDVPWDQALETILDIHGLA 261 Query: 82 TRQEGNILSVHSI-AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 ++ GN++SV S+ + + R+ AE+ + +A + R + LL Sbjct: 262 KKEMGNVISVMSLEKKKKDEEVRKAAEKDQIEAEANRKKRE---------------QDLL 306 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 + KG + Q+ + A IV +E+ ++ LGV Sbjct: 307 AEKGRLR--------------------------------QISIEAKIVEASEEFIKNLGV 334 Query: 201 KWTLADAQHAG----------------------------GVGQVTT-LGSDLSVAT---- 227 W A + G G+G T+ G+ LS A Sbjct: 335 TWGGAVSARMGSYPFQAAYGTNTRTTEGQTNPVSYPYPAGIGYTTSGTGAVLSQAAVNMP 394 Query: 228 ----ATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 T +G IG +LD++++ALE II++P++ A IKQG EIPY Sbjct: 395 GSIIGTPTLGVVIGGSKA-VLDVQIAALESTSSGKIISTPKVTTMDGVTAKIKQGEEIPY 453 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 + + G V FKEAVL +EVTP++ GRI ++++ + + G+ + I K Sbjct: 454 -TTYDDKGYPRVNFKEAVLKLEVTPSITPDGRISMQINATNDRGDYAKAGILGDNVPIIK 512 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 E++++V V+ G T+ +GG+ + + VP L IP G LF+ + + R++L++F Sbjct: 513 NEVDSKVVVEDGTTIVIGGVSKTTDDTSTSGVPWLSRIPVLGWLFKSENTDRTRKQLLIF 572 Query: 404 ITPRLV 409 +TP+++ Sbjct: 573 VTPKII 578 >UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYV5_DESOH Length = 538 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 124/431 (28%), Positives = 217/431 (50%), Gaps = 59/431 (13%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 VT+ + D +A +L+AL + N+++ VSG +++ VPWK+A ++++ GL Sbjct: 99 VTIHMTDTDIAVILRALTKAAGKNIIIGAGVSGRANINAEGVPWKEAFAGLLRTHGLTYN 158 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSIT----LQYADAGELAK----- 134 + G+ L + ++A + A + A R Q RS+T L+Y++A ++A Sbjct: 159 RIGDTLRIKTLADIQQDFAIENA--YRKQQG----ERSVTQVFFLKYSEAADVANLLKPV 212 Query: 135 -----AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVA---QMDLPVGQVELSAH 186 + E + A+ S+ VDKR N +++ T L +EQ A Q+D P QV + AH Sbjct: 213 TARAASAEGVKEAQQSVVVDKRNNAVIVH---TPLPGIEQCAALIRQIDRPTRQVLIEAH 269 Query: 187 IVTINEKSLRELGVKW--TLADAQHA-------GGVGQVTTLGSDLSVATATT------- 230 IV ++ + R+LG++W D QH+ G GQ + + VA T Sbjct: 270 IVETSKDTARQLGIQWGGVAKDKQHSWFTGATEGPAGQTLFDANGVPVAANPTGNWAANF 329 Query: 231 -----HVGFNIGRI----NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEI 281 + G ++G I L+ +L+ALE+ +L+I++SP + A I+ G ++ Sbjct: 330 PASLGNTGLSLGYIYQDLGQSLIAAQLTALEEDGKLNILSSPSITTLDNSAAVIESGRDV 389 Query: 282 PYQVSSGESGATSVEFKEAVLGMEVTPTVLQKG--RIRLKLHISQ-NVPGQVLQQADGEV 338 P+Q E ++E+K+AVL + VTP ++ R+++K H + + VL DG Sbjct: 390 PFQTV--EDNEVNIEWKKAVLSLAVTPHIIDASTLRVKIKTHKDELDWSNAVL--TDGNP 445 Query: 339 LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR 398 I K ET++ + G+T +GG+ + + Q VPLLG IP G FR + ++ Sbjct: 446 TIITKNA-ETEMILFDGQTTVIGGLNKQSSSQSQFGVPLLGRIPILGFFFRSTSRSNDME 504 Query: 399 ELVVFITPRLV 409 E+++FITP ++ Sbjct: 505 EVLIFITPHIL 515 >UniRef50_A0LFN7 Type IV pilus secretin PilQ n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFN7_SYNFM Length = 636 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 115/405 (28%), Positives = 210/405 (51%), Gaps = 24/405 (5%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 KP + L+ D + VL+ LA+ N+V+ PDV+G V+L + VPW Q L ++ Sbjct: 232 KPISLDLL--DADLRNVLRLLADLTGTNIVIEPDVTGKVTLKVEQVPWDQVLDMIISMND 289 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSI--------TLQYADAGE 131 L Q G+++ + + + A Q+AE RA+ L ++ + T+ YA + Sbjct: 290 LGQEQVGSVIRIARRSKLKSEWA-QQAEAIRAKQEYLLTSKDLGEINTAYLTVNYAQVTD 348 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +A + S KG ++VD+RT+ ++ D ++ + ++D P QV + A I+T+ Sbjct: 349 VASKINEAKSDKGKVSVDERTSLIIYSDYPGRINNARMLLNRLDRPTSQVLIEARIITLT 408 Query: 192 EKSLRELGVKWTLA--DAQHAGGVGQVTTLGSDLSVATATTHV-GFNIGRINGRLL---D 245 + R LG+ H+ T +D + + ++ N+ ++ G L D Sbjct: 409 SEVKRSLGMNLGFGGDTPNHSA-----TVPFTDFLINSPPANLFALNLAQMVGTTLLKVD 463 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY-QVSSGESGATSVEFKEAVLGM 304 L +SALE ++ I+A+PR+L + A I QG +IPY +V S T +FK+AVL + Sbjct: 464 LTISALETADEIRIMAAPRVLTMNNVKAVISQGVQIPYLKVGDTASNITGTDFKDAVLEL 523 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 VTP + ++R+ + Q+ P + A G+ ID ++I T++ V G + +GGI Sbjct: 524 AVTPHITPDHKVRMTIEAKQDEPSSTVTGAQGQP-GIDTRKISTELLVDDGNIIVIGGII 582 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ++++ + + P L D+P G+LF+ + + +R E+++FI P++V Sbjct: 583 RNRDEAKKTATPGLSDVPILGRLFKSNEVDAQRNEILIFICPKIV 627 >UniRef50_C9RKD2 Type II and III secretion system protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD2_FIBSS Length = 487 Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 104/383 (27%), Positives = 190/383 (49%), Gaps = 27/383 (7%) Query: 46 LNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQE 105 ++++++PDV G +SL +T W++ L + L + +S+ ++ + Sbjct: 58 VDILIAPDVKGKISLRVTKKTWQETLDIICNMNDLTWVIQDKYISIQRLSTYQAKQKKLA 117 Query: 106 AEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALS 165 E+ +A+ N PL ++ + +A A EL K E + S +G ++V +RTN +++ D ++ + Sbjct: 118 DEENQAEQNAPLVRKNFQVHHAKADELVKVLESMKSNRGKISVVERTNSIIVYDTESKIE 177 Query: 166 ALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA-------------------D 206 + + ++D+ Q+ ++A +V +N + RELGV WT A Sbjct: 178 QMGNALVELDVETLQIMITAKLVVVNSELARELGVDWTAALGSSTLTPGTAAAATGATAG 237 Query: 207 AQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLL 266 + GV Q G+ +V A T + ++ N L + +S L +++ASP++ Sbjct: 238 SSRISGVIQSFPNGTSPAVGKANTAITASLLDNN---LQIAISNLMGDASTEVLASPQVS 294 Query: 267 ASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNV 326 A + G ++ +V +SG +S + E + + VTP V RI L LH N Sbjct: 295 TLDNTEAQVFMGDKVSIRVID-DSGESSTKMVETGIKLTVTPHVSGDNRILLDLHPENNS 353 Query: 327 PGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQ 386 G GEV+ I QE +T+V V GET+ +GG+ +N + +P L DIP G Sbjct: 354 YG---YDEKGEVV-ISTQEAKTKVVVADGETVVIGGLTRNENTESESGIPFLKDIPLLGN 409 Query: 387 LFRHDGKEDERRELVVFITPRLV 409 LF++ K +++LV+F+TPR++ Sbjct: 410 LFKYSRKSITKKDLVIFVTPRII 432 >UniRef50_C0GNC2 Type IV pilus secretin PilQ n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNC2_9DELT Length = 569 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 121/425 (28%), Positives = 195/425 (45%), Gaps = 55/425 (12%) Query: 12 LIPGVQAAKP-QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 L PG++ + V++ + + V VL+ + + NL++ +V G +SL L +VPW QA Sbjct: 171 LFPGMREEYTGEPVSIDLQNAEVEHVLRLITHHTEYNLILDEEVQGKISLRLREVPWDQA 230 Query: 71 LQTVVKSAGLITRQEGNILSVHS---IAWQNNNIARQEAEQARAQANL----PLENRSIT 123 L V+ L ++GNI+ V + + + R + Q +L PL+ R I Sbjct: 231 LDLVLAQKDLGMVRKGNIIRVTTADRLEAEEERRRRSRQAELEDQESLRKLEPLQQRFIQ 290 Query: 124 LQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 + YA A EL E LS +G +T D RTN L++RD + L + Q + +D P QV + Sbjct: 291 INYARADELQPRIEDFLSERGRVTQDARTNTLIVRDTPSQLEEITQLIDNLDRPERQVLI 350 Query: 184 SAHIVTINEKSLRELGVKWTLA--------------------DAQHAGGVGQVTTLGSDL 223 A +V E RELGV W A D + GVG + G Sbjct: 351 EARVVYATESFRRELGVDWGFAYQSPGLDSNIISPDTFNFPSDLEGLLGVGYMGHEGQSF 410 Query: 224 SVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 SV A +G + G+ N I++P+++ + Q A I+QG+++ Sbjct: 411 SVLEARLRLGESQGKSN------------------TISAPQIMTLNNQEAKIEQGTDVAV 452 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 V + T E+ A L + VTP + + L L +S N P GE I+ Sbjct: 453 DVIDADL-RTRREYVPATLELIVTPQITPDNNLILNLEVSDNAP--------GEGGNIEV 503 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 ++ ET + + GET+ +GGI + +P L +P G LF+H+ E+ EL++F Sbjct: 504 KKAETTLFAEDGETIVIGGIKKLSESQRETGIPPLSRLPILGWLFKHELVEENMDELLIF 563 Query: 404 ITPRL 408 I P++ Sbjct: 564 IRPKI 568 >UniRef50_B8FHA0 Type IV pilus secretin PilQ n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA0_DESAA Length = 844 Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 133/438 (30%), Positives = 204/438 (46%), Gaps = 55/438 (12%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHL-TDVPWKQALQTVVKSAGL 80 +K+ L + V + L E LN + DV G V+L L VPW Q L V+K L Sbjct: 412 EKIALDFYKTDIKNVFRILKEVSGLNFAIDRDVEGEVTLTLEKPVPWDQVLHLVLKMNQL 471 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL------------------------P 116 ++ I V IA Q+ AE+AR QAN+ P Sbjct: 472 GMQK---IKDVIRIAPQSVLDEEAAAERAREQANIDRIKTLTETKNQQMQNELQQQALEP 528 Query: 117 LENRSITLQYADAGELAKAGEKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + I + Y DA +L K E + S +GS+ VD RTN +++ D K + V+++D Sbjct: 529 MVTEFIPVNYTDASDLIKHVEAVKSPDRGSVDVDIRTNTIIMIDIKDRIKRARDIVSRLD 588 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG----GVGQVT-------TLGSDLS 224 QV++ A +V R +G+ W G GVG T G + S Sbjct: 589 RVTAQVQIEARVVEAQTTFSRSIGLAWNGESGIQPGDSREGVGPQRGYDVLGGTYGYNWS 648 Query: 225 VATAT-------THVGFNIGRINGRL---LDLELSALEQKQQLDIIASPRLLASHLQPAS 274 V T GFN R+ G L+ L+A E + ++ I++SP++ +PA+ Sbjct: 649 VNYPTETDDYGNNTFGFNFSRLLGLTPLSLNATLNAAESRGEIKIVSSPKIRTLDNKPAT 708 Query: 275 IKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 IKQG + P + G+ G T + +K L +EVTP V Q R+ +K+ + +N G V+ Sbjct: 709 IKQGIDYPIKQFDGD-GNTVIVYKAVDLQLEVTPHVTQDRRVSMKMTVEKNDVGAVIS-- 765 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 E + + +E++T++ V G+T+ +GGI + D P L D+P G LF+ K Sbjct: 766 --EEQSFNTKEVDTELLVNDGDTVVIGGIIKTTFRDDVDGWPGLIDVPVLGWLFKDSTKS 823 Query: 395 DERRELVVFITPRLVSSE 412 +ER EL+VFITP +V E Sbjct: 824 EEREELLVFITPTIVELE 841 >UniRef50_Q47JK8 Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal n=2 Tax=Betaproteobacteria RepID=Q47JK8_DECAR Length = 715 Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 133/446 (29%), Positives = 223/446 (50%), Gaps = 67/446 (15%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 +V++ + V +L+ +AE+ LN V+S V+GT +L L DVP Q + + + GL Sbjct: 277 RVSINYQNGDVRALLRLMAEELGLNAVISETVTGTTTLVLKDVPADQVIDIIFQQKGLDM 336 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQYADAGELAK---- 134 R++GNI+ + + IA +E + ++ + PL+ L Y A ++A+ Sbjct: 337 RKKGNIIMIAP----RDEIATREKLEFESKQQISELEPLKLEQFQLNYQKAADVARLLAG 392 Query: 135 -------------------AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 A +++LS +GS D ++N + + D + L + ++A +D Sbjct: 393 LPPLGAAGAAAAPAPGTNVAAQRILSKRGSAVADPQSNIIFINDIPSKLEEIRSFIAAID 452 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLADAQ--HAGGVGQVTTLGSDLSV--ATATTH 231 QV + A +V + R LG K+ + Q G G GS + +T+T Sbjct: 453 TGARQVLIEARVVEAQDSFNRALGGKFGFLNKQAVQPAGSGINVAGGSSTTAGQSTSTPM 512 Query: 232 VGFNIGRIN--------------GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 VG N+ + R+L+LEL+ALE I++SPR++ ++ A I+ Sbjct: 513 VGVNLPSPSTGGSLALSLFTASFSRILNLELAALESDGLGKIVSSPRVITANNVKAKIED 572 Query: 278 GSEIPY--QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 G+EIPY SSG + +V FK A L +EVTP + +G +R+ L + + ++AD Sbjct: 573 GTEIPYVTTQSSGGTTTATVSFKPAKLSLEVTPQITPEGTVRMNLVVKK-------EEAD 625 Query: 336 ---GEVL------AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQ 386 VL I +ET V V++G T+ +GG+F ++ + VPLLGDIP+FG Sbjct: 626 WTKAVVLNGYANPPIKSSVVETNVVVENGGTVVIGGVFITDTQNSVEKVPLLGDIPFFGW 685 Query: 387 LFRHDGKEDERRELVVFITPRLVSSE 412 LF++ +RREL+VFITPR++S + Sbjct: 686 LFKYKNDIGKRRELLVFITPRVISDK 711 >UniRef50_C8X4Q5 Type II and III secretion system protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4Q5_DESRD Length = 499 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 118/434 (27%), Positives = 209/434 (48%), Gaps = 61/434 (14%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +KV+L D + +L+ LA N+V+S ++SGT+SL + D+PW QA +V+ + GL Sbjct: 76 EKVSLKFRDNKIQVILRTLASAASQNIVMSNNISGTMSLDVKDIPWSQAFLSVITTNGLT 135 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYA-------------D 128 +G+I+ V S + +E +Q + + + L+ + + YA D Sbjct: 136 YSWQGDIIQVQS---PKDMQMEKELQQIQKETQI-LQTTVVDIDYAHIVDKGVKSGNTND 191 Query: 129 AGELAKAGEKLL----------SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 G L + EK L S +G++ VD+ N L+++ K + + ++ P Sbjct: 192 NGNLDQL-EKTLREVLKNASGGSKEGTLFVDRENNALIIQATKEDTQRILHVLNHLERPR 250 Query: 179 GQVELSAHIVTINEKSLRELGVKW---------------TLADAQHAGGVGQ-VTTLGSD 222 Q+ + A IV + + RELG++W + DAQ G +TTL Sbjct: 251 KQIHIEASIVEATQNTARELGMRWRGRYVTSGRGIEDVGIIGDAQEPEDWGSAITTLPGS 310 Query: 223 LSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 + +G +G I G +L +L ALE++ Q++I+ASP L Q AS + G +P Sbjct: 311 GTDTLGGLKLGTVVGEIAGNVLFSQLQALEKEGQVNILASPSLTTMDNQSASTQHGERVP 370 Query: 283 YQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRL-------KLHISQNVPGQVLQQAD 335 Y+ ++ E G V+F++ +G++V P +++ + + ++ SQNV G L Sbjct: 371 YE-TTDEDGDRVVKFEDVAMGLKVHPRIIEGDLMAMDIVVTKDEVDFSQNVQGNPL---- 425 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 I +E ET + V++GET+ + G+ + + VP L +P LF+ K + Sbjct: 426 -----IRTKETETNLLVRNGETIVISGLSKQTVSGTEHGVPGLRKVPGLSWLFKGIDKSE 480 Query: 396 ERRELVVFITPRLV 409 + E +VFITP ++ Sbjct: 481 DMEEFMVFITPTIL 494 >UniRef50_D2RIL0 Type II and III secretion system protein n=2 Tax=Acidaminococcus RepID=D2RIL0_ACIFE Length = 405 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 116/398 (29%), Positives = 198/398 (49%), Gaps = 42/398 (10%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV 75 V AA+P ++L V + PV VLQ++A+ NLV+ + GT+SL + +P+ QAL+ V Sbjct: 19 VLAAEP--LSLSVQEAPVRDVLQSMAQMAGRNLVLDSQIPGTLSLEIQQLPFPQALEMVT 76 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 +S GL R+EGN L V S R +A R + PLE Y A E A+ Sbjct: 77 RSQGLCFREEGNTLWVAS-------PERMDALYGRLTVH-PLE-------YISARETAET 121 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 + L S + + D TN +L + + L++ + +D P Q+ L A I+++ E + Sbjct: 122 LKPLFSTPLAWSRD--TNAILFHGSPGEENRLKEALKALDRPTRQITLEARILSLGESAS 179 Query: 196 RELGVKW---TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALE 252 RELG++W L + + G G G L ++G G LSAL Sbjct: 180 RELGLQWDWSALPEGRKKGEGG----FGGRL-----------HLGHSYGASFQARLSALC 224 Query: 253 QKQQLDIIASPRLLASHLQPASIKQGSEIPY--QVSSGESGATSVEFKEAVLGMEVTPTV 310 Q+ + ++A+PR++ + ASI G IP + + + ++ E+ +A + + TP + Sbjct: 225 QEGKAKVLATPRIITLPGREASIFIGDHIPVVTEKVTNSTTTSTTEYVDAGIRLSYTPYL 284 Query: 311 LQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKS 370 Q G I K+H + P + A+ + I + +T V ++ ETL +GG+ + + + Sbjct: 285 SQDGLITAKVHTEVSTPTLI---AELKNYRITSRTADTHVRLREKETLVIGGLISEQEQH 341 Query: 371 GQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 +++PLL +P G+LF+ + R E+ +F+TP L Sbjct: 342 RMEAIPLLSKLPLLGELFKFRSRSRNRTEVCMFLTPYL 379 >UniRef50_A1HM79 Type II and III secretion system protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HM79_9FIRM Length = 414 Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 112/406 (27%), Positives = 193/406 (47%), Gaps = 33/406 (8%) Query: 12 LIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQAL 71 ++P AA P V + V D V VL ALA ++++V V+G +++ L ++P++ AL Sbjct: 33 VMPPALAAGPM-VNMNVTDAEVRDVLTALASVGRVSIVADDSVTGKITIQLRNIPFETAL 91 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 V K+ GL + GN++ V S + + I L+YA A E Sbjct: 92 DLVTKTKGLTYYKTGNVIVVASADKLSKGFGSVQI---------------IKLKYARADE 136 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 + K+ L+ + VD+ TN L+ + AL Q +A++D+P QV L A +V IN Sbjct: 137 VKKS-LALVIPDERLKVDEATNSLVFSGSPAESEALRQALAELDVPYEQVSLEAQVVAIN 195 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVG-FNIGR-INGRLLDL--- 246 + ++LG W Q +G + + T + G G+ +G + Sbjct: 196 RNAAKDLGFDW-----QWSGLPANTEFDSTSGTTKTTREYPGVIKFGKAYDGTPYEFTFQ 250 Query: 247 -ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG--ATSVEFKEAVLG 303 +LSAL + ++A P++ + + A I G IP V E+G T++E+ +A + Sbjct: 251 AKLSALITSGEAKLLAKPKITTINGKEAKILIGDRIPVLVERTENGKTTTTIEYIDAGIK 310 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 + TP + G I +H + P V + + + +E T V +K G+T+ +GG+ Sbjct: 311 LTYTPRINADGYITAAVHTEVSTPTLVPEM---KAYRVTTREATTNVRMKDGDTMVIGGL 367 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + + G++ VPLL D+P G+LF K E+V+F+T R+V Sbjct: 368 ISNEESGGKNRVPLLSDLPVLGKLFESVHKTKNETEVVIFLTARIV 413 >UniRef50_B6BQP5 Type II Secretion PilQ n=2 Tax=root RepID=B6BQP5_9RICK Length = 516 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 119/443 (26%), Positives = 222/443 (50%), Gaps = 58/443 (13%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 +LIP + Q+VTL ++ + ++ + + ++N++V +V+G +S L DVPW +A Sbjct: 87 LLIPDEYKSLKQRVTLKFKNLDYKETMKLMGKIGEINVLVGDEVAGAISAELVDVPWDKA 146 Query: 71 LQTV--VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQA-RAQA---NLPLEN----- 119 Q + +K+ N++ VHS + QE ++ RAQA + LE+ Sbjct: 147 FQALLDMKNYASDIDVNSNLIRVHS----PETLTSQETYKSERAQAVKNKVELEDSVEPI 202 Query: 120 -RSITLQYADAGELAKAG-EKLLSAKG-------SMTVDKRTNRLLLRDNKTALSALEQW 170 I Y + LAK+ E+L + G +T + T +++R + L +++ Sbjct: 203 ISEIFRLYYISPALAKSTIEELFKSTGENAYSPIKITEETATRSIIVRGKERDLDTVDKV 262 Query: 171 VAQMDLPVGQVELSAHIVTINEKSLRELGVK----WTLADAQHAGGVGQVTTLG------ 220 + ++D+ QV + A +V + ++LG + + D Q G VG ++ G Sbjct: 263 LNEIDIKTEQVLIEAFVVKATSEFEKQLGTRLGGYYKRNDEQIGGIVGSTSSAGTLDDTS 322 Query: 221 -----------SDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASH 269 ++ + AT+ +G + + +L E++ALE+ ++ I++P++ + Sbjct: 323 AALAQVAKDQITNFAATGATSGIGI-LKKTGSAVLKAEITALEKMGMVETISNPKVFTIN 381 Query: 270 LQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQ 329 QPAS+ QG EIPY+ +S G TS FKEA L ++VTP+++ G + L + ++ + Sbjct: 382 NQPASVTQGKEIPYETTS--EGTTSTSFKEAALKLQVTPSIIGDGNVLLDIQVNND---- 435 Query: 330 VLQQADG--EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP-LLGDIPWFGQ 386 AD + I K EI T++ V G+ + +GGI + ++ VP LG++P G Sbjct: 436 ---DADTSQDEPPITKMEIITKLLVADGDIVVIGGIKSNNISKAKEQVPGGLGNVPVIGN 492 Query: 387 LFRHDGKEDERRELVVFITPRLV 409 L ++ KED+ EL++FI PR++ Sbjct: 493 LLKYKKKEDKLEELLIFIAPRVL 515 >UniRef50_B1XUD4 Type II and III secretion system protein n=1 Tax=Polynucleobacter necessarius subsp. necessarius STIR1 RepID=B1XUD4_POLNS Length = 509 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/429 (23%), Positives = 203/429 (47%), Gaps = 46/429 (10%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 K V L DV + ++ QA+ + +N++V +V GTV++ + +VPW +AL +++ G Sbjct: 89 KSFNVNLNFVDVDIRELAQAMTQVSGVNILVGDEVEGTVTVKINNVPWDKALDNILRIKG 148 Query: 80 LITRQE--GNILSVHSIAWQNNNIARQEAEQARAQ--ANLPLENRSITLQYAD------- 128 L + NI+ + +AR E E+ R + + R ++ Q + Sbjct: 149 LSKSVDPGSNIIRIQK---PETVLARDEFERKRLEEVSRQIAAKRIVSTQVTEIFRLYYT 205 Query: 129 -------------AGELAKAGEKLLSAKGSM---TVDKRTNRLLLRDNKTALSALEQWVA 172 G AG + G + T D+R N ++++ ++ + + + ++ Sbjct: 206 KPAIVKKQLEAIFGGNTGAAGAQATRPPGGIIEITTDERINSIIVKGTQSEMELVAKLIS 265 Query: 173 QMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGV--------GQVTTLGSDLS 224 ++D+ +V + A IV ++ ELG ++ + G G V L + Sbjct: 266 KLDIRTQEVLIEAFIVEADDDWQYELGSRFGYRNTTGNGTSTNPTSAVGGAVGDLANANI 325 Query: 225 VATATTHVGFNIGRI---NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEI 281 + T F +G + L +EL+A+E+ + II++P + + A + G +I Sbjct: 326 FSRPVTGAPFGLGYLFQTTASQLKVELTAMEKLSLVKIISNPHVFTMDNEEAVVIDGVQI 385 Query: 282 PYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAI 341 PY V + + EFK+A L + TP+++ G + L + ++++ P +I Sbjct: 386 PYPVPGVGTNQITYEFKDAALKLTATPSIVGDGNLFLNMIVNKDSPNYSTSPP-----SI 440 Query: 342 DKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELV 401 +K+E+ +++ ++ G +GGI+ + ++ + VPLLG IP G LF + K D++ +L+ Sbjct: 441 NKREVRSKLLIQDGTIAVIGGIYDQTKENTVEKVPLLGSIPLLGSLFSYTRKADKKTQLL 500 Query: 402 VFITPRLVS 410 VFI P++++ Sbjct: 501 VFIAPKILN 509 >UniRef50_A4SUZ8 Type II and III secretion system protein n=2 Tax=Polynucleobacter necessarius RepID=A4SUZ8_POLSQ Length = 353 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 83/240 (34%), Positives = 137/240 (57%), Gaps = 21/240 (8%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVT--TLGSDLSVATATTHVGFN-- 235 Q+ + A IV +E+ RELGVK Q A G T + ++L + A + GFN Sbjct: 122 QILIEARIVEADERFARELGVKI----GQQANLAGSRTDKKISANLDLGGAGLN-GFNPA 176 Query: 236 ------IGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 + + RLL +ELSALE + Q I+++PR++ A+I+QG+E+PYQ +S Sbjct: 177 TVAATLLSKDASRLLQMELSALESEGQGKILSNPRIMTGDQVKATIEQGTELPYQTTS-- 234 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 + ++F++A L +EV P + G+I + + I+++ G +Q AID + + ++ Sbjct: 235 QNGSKLQFRKANLRLEVLPKIHPDGKISMLVGINKDTIGMKTEQG----YAIDTKSLSSE 290 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V V++G T +GGI+ + + +PLLGDIP FG LFRH K ++ EL+VF+TP ++ Sbjct: 291 VTVENGGTAIIGGIYQTTEREDEVKIPLLGDIPLFGHLFRHKSKLKDKTELLVFLTPTVL 350 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 40/65 (61%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 ++L D+ VA++LQ LA+ N ++S + G +S+ L + PW+ AL +++ S GL Sbjct: 24 ISLQFVDIEVAELLQVLAKLGHTNFLLSESIKGKISVDLNNTPWQTALHSILASRGLRLV 83 Query: 84 QEGNI 88 + G+I Sbjct: 84 RNGDI 88 >UniRef50_C1ZJR8 Type II secretory pathway, component PulD n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJR8_PLALI Length = 915 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 114/435 (26%), Positives = 206/435 (47%), Gaps = 57/435 (13%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 PG +K L V+ + +VL+ LA+ +N++ SP+V G V+++L V + AL Sbjct: 340 PGGNVTSDEKFDLQVEQAELPRVLELLAQMAGINILTSPEVVGKVTVNLQGVTLEAALDG 399 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 ++++ G + ++EG+++ V + +EAE AR A+ + + Y + EL Sbjct: 400 LLRTRGYLYQREGDMVFV---------MTAREAE-ARRLASRKVLTKIYQPNYINVKELQ 449 Query: 134 KAGEKLLS---AKGSMTV---------------DKRTNR--LLLRDNKTALSALEQWVAQ 173 + + +L+ K S+T D + R LL++D + ++ +++ + + Sbjct: 450 QLVQPILTPTLGKVSITSPSSVGIAENATDAGGDSLSQRDALLVQDYEEVINEIDRVIIE 509 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWTL-----------------ADAQHAGGVGQV 216 MD+P QV + A I+++ GV L + GG G + Sbjct: 510 MDIPPLQVIIDAKILSVKLTDDMAFGVNLALLGGDKNLAVTGNGASIATSSGFPGGTGSI 569 Query: 217 TTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK 276 G+ TA GF G I G + ALE ++ASP++ A + Q A + Sbjct: 570 IPPGAQFLANTAGLKYGFIAGDITGFI-----RALESIADTSLVASPQIRALNKQRAEMI 624 Query: 277 QGSEIPYQVSSGESGAT--SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 G+ + Y+ + S T +V F E+ + + P + G +R+++H ++ V+ Q+ Sbjct: 625 IGNRLSYKTLAFNSTQTIENVNFLESGTKLIIRPFIAPDGLVRMEVHPERS--RAVINQS 682 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 G + D E+ T V V+ G+T+ +GG+ + ++ D VP+LG IP G FR+ Sbjct: 683 TG-LPDQDTTEVTTNVMVRDGQTVVIGGLISEESTESIDRVPVLGAIPLVGAAFRNKSSR 741 Query: 395 DERRELVVFITPRLV 409 ER EL+V ITPR+V Sbjct: 742 IERTELIVLITPRIV 756 >UniRef50_A8UYL2 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UYL2_9AQUI Length = 550 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 91/277 (32%), Positives = 152/277 (54%), Gaps = 22/277 (7%) Query: 150 KRTNRLLLRDNKTALSALEQWVAQM--DLPVGQVELSAHIVTINEKSLRELGVKWT--LA 205 K N ++L D + +++ ++ D+P QV++ A I+ + ++ +RELG+ W+ L+ Sbjct: 279 KEFNAVMLTDYPEIIEKIKEQFSEYISDVP-PQVKIEARILEVRKEVVRELGINWSALLS 337 Query: 206 DAQ-------HAG---GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQ 255 +A+ AG GVGQ + LS AT + F + L+L LSA E+ Sbjct: 338 NAKVQQSWSGGAGVNLGVGQAGAITPSLS-ATPGGILTFTYAKGALNALNLRLSAFERLG 396 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQ--VSSGESGATSVEFKEAVLGMEVTPTVLQK 313 ++ +A P ++ + Q A IKQG EIPYQ V +G S S++FKEAVL + V P + Sbjct: 397 KIKSLAKPTIVTINGQNAVIKQGQEIPYQTAVIAGGSSVPSIQFKEAVLELNVLPIISPD 456 Query: 314 GRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 GRI L + + Q +PG +Q G I K+++ T+V V +G+T+ +GGI N++ ++ Sbjct: 457 GRILLDMELKQEIPG--VQTPIGP--TIIKKQVSTKVIVNNGDTIVIGGIIDSLNRNTKE 512 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 V L +P LF + K + EL++FITP +++ Sbjct: 513 GVAGLVRVPILKWLFGQESKHIQDIELLIFITPSIIT 549 >UniRef50_B5YDZ7 Bacterial type II and III secretion system protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDZ7_DICT6 Length = 1256 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 99/382 (25%), Positives = 184/382 (48%), Gaps = 38/382 (9%) Query: 33 VAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVH 92 + +VL+ L ++ +N V+ V+G + L+L V + L + K A + + G++ V Sbjct: 907 IREVLRELGKKADINFVIDQKVTGQIDLYLNKVELPETLDILSKIASISFEKVGSVTFVK 966 Query: 93 SIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRT 152 + +A +E P+ + L+Y L K+ ++ + D+ + Sbjct: 967 --PFTTAVVATKEGA--------PIVTKEYKLKYISLDTL-KSVVSGIAKDVNFYYDQTS 1015 Query: 153 NRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGG 212 LL++ +S++E +A++D P QV++ ++ ++ ++++++G++W G Sbjct: 1016 GLLLVQGPADQVSSVESMIAKLDKPTPQVKIDVQVIEVSRENIKDIGIEW---------G 1066 Query: 213 VGQVTTLGSDLSVATATTHVG---FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASH 269 G ++T G + T +VG I IN + + ALE + + I+A P + Sbjct: 1067 TGSIST-GLQI-----TANVGWQDLRISIINPGQISANIKALESQNKAKILAQPSMTTVS 1120 Query: 270 LQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQ 329 + I G +P +S G V F + + + VTPTV G I+ N+ Q Sbjct: 1121 GKSTRIMIGDRVPL-ISYDAQGNRQVSFVDVGIILNVTPTVNADG------TITANLNPQ 1173 Query: 330 V--LQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQL 387 V +Q +V I +E +T V +K+GETLALGG+ ++ VPLLGDIP G+L Sbjct: 1174 VSTIQGYVQDVPIISTREAQTIVNLKNGETLALGGLLRQEEIESMSKVPLLGDIPILGEL 1233 Query: 388 FRHDGKEDERRELVVFITPRLV 409 F+ + REL++ ITP+++ Sbjct: 1234 FKARKIQKVERELIILITPKII 1255 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 17/160 (10%) Query: 33 VAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVH 92 + VLQ +A + LN +V P VSGTV L + VP + L + + A + G + Sbjct: 583 IRDVLQEIASKTDLNFIVDPKVSGTVDLFVNKVPLDEVLTIIQRLANFDMEKVGKTYYIR 642 Query: 93 SIAWQNNNIARQEAEQARAQANLP--LENRSITLQYADAGELAKAGEKLLSAKGSMTVDK 150 Q A +P + + L+Y ++ + G L+ S++ D Sbjct: 643 PKEVQT--------------ATVPQVISTKLYVLKYITLQDILRVGGSLVK-NLSLSYDD 687 Query: 151 RTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 +T L+ + + L L++ ++++D+ + +S ++T+ Sbjct: 688 KTRLLIAQGKEDDLKVLDELISRIDVEKKEAVVSRELLTV 727 Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 43/73 (58%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 Q++++ D + VL+A+ + LN++ V G +S++L D+P+K A ++ S+ L Sbjct: 310 QRISVSFDRAEIRDVLKAMGQLAGLNIITDIGVQGRISVYLKDIPFKDAFYALLASSDLG 369 Query: 82 TRQEGNILSVHSI 94 Q+G I+ V ++ Sbjct: 370 YIQQGEIIIVANL 382 >UniRef50_B8E238 Type II and III secretion system protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E238_DICTD Length = 1421 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 98/380 (25%), Positives = 182/380 (47%), Gaps = 34/380 (8%) Query: 33 VAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVH 92 + +VL+ L ++ +N V+ V+G + L+L V + L+ + + + + G+ V Sbjct: 1071 IREVLRELGKKADINFVIDQKVTGQIDLYLNRVELPETLEILSRITNISFEKVGSATFVK 1130 Query: 93 SIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRT 152 + N + A+ P + L+Y L K+ ++ S D+ + Sbjct: 1131 PL---NTTVTT-------AKEGTPTVTKEYKLKYISLDTL-KSVVSGIAKDVSFYYDQTS 1179 Query: 153 NRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGG 212 LL++ +S++E +A++D P QV++ ++ ++ ++++++G++W+ + G Sbjct: 1180 GLLLVQGPADQVSSVESMIAKLDKPTPQVKIDVQVIEVSRENVKDIGIEWSTGSI--STG 1237 Query: 213 VGQVTTLG-SDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQ 271 + LG DL V+ N G+I+ + ALE + + I+A P + + Sbjct: 1238 LQITANLGWQDLRVSIV------NPGQISANI-----RALETQNKARILAQPSMTTLSGK 1286 Query: 272 PASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV- 330 I G +P +S G V F + + + VTPTV G I+ N+ QV Sbjct: 1287 ATRIMIGDRVPL-ISYDAQGNRQVSFVDVGIILNVTPTVNADG------TITANINPQVS 1339 Query: 331 -LQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFR 389 +Q +V I +E +T V +K+GETLALGG+ ++ VPLLGDIP G+LF+ Sbjct: 1340 TIQGYVSDVPIISTREAQTIVNLKNGETLALGGLLRQEEIDSMSKVPLLGDIPILGELFK 1399 Query: 390 HDGKEDERRELVVFITPRLV 409 + REL++ ITP+L+ Sbjct: 1400 ARKTQKVERELIILITPKLI 1419 Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust. Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 30/231 (12%) Query: 33 VAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVH 92 + VLQ +A + LN ++ P VSGTV L + VP + L + + A + G + Sbjct: 585 IRDVLQEIASKTDLNFIIDPKVSGTVDLFVNKVPLDEVLTIIQRLANFDMEKVGKTYYIK 644 Query: 93 SIAWQNNNIARQEAEQARAQANLP--LENRSITLQYADAGELAKAGEKLLSAKGSMTVDK 150 Q A +P + + L+Y ++ + G L+ S++ D Sbjct: 645 PKEVQT--------------ATVPQIISTKLYVLRYITLQDILRVGGSLVK-NLSLSYDD 689 Query: 151 RTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHA 210 +T L+ + + L L+ ++++D+ + ++ ++T+ RE + D + A Sbjct: 690 KTKLLIAQGKEDDLKVLDDLISRIDVEKKEAVVAKELLTVE----REGDKVYVSCDLRSA 745 Query: 211 GGVGQVTTLGSDLSVATATTHVGFNIG-RINGRLLDLELSALEQKQQLDII 260 + LG + F I ++ G+ +DL L+ +E + L+II Sbjct: 746 DIREVLRELGK-------KADINFVIDQKVTGQ-IDLYLNRVELPEVLNII 788 Score = 43.1 bits (100), Expect = 0.017, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 13/156 (8%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 Q++++ D + VL+A+ + LN++ V G +S++L D+P+K A ++ S+ L Sbjct: 312 QRISVSFDRAEIRDVLKAMGQLVGLNIITDIGVQGRISVYLKDIPFKDAFYALLASSDLG 371 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 Q+G I+ V N+ + + ++R L + L+Y ++ + AK +S Sbjct: 372 YIQQGEIIIVA-------NLDKLQKIESR-----DLMTKVYQLKYFESQK-AKDILSKIS 418 Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 D N L++ + + +E + +D+P Sbjct: 419 KTAIFDSDDSRNWLIVSAPPSEFAKIENTIKTLDIP 454 >UniRef50_C6WVN7 Type II and III secretion system protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVN7_METML Length = 659 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 104/414 (25%), Positives = 198/414 (47%), Gaps = 39/414 (9%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT--VSLHLTDVPWKQA 70 IP +++A + +TL +V V V + + + +N ++ S+ + D P + A Sbjct: 183 IPQIKSAFKKPITLEFKNVSVRSVFEFIGKAANINFSYDQELRDNQRTSIFVRDTPIEDA 242 Query: 71 LQTVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 +Q ++ + L + N L ++ ++ R+Q L RS L DA Sbjct: 243 IQVILTTNQLAKKVLNDNTLLIYPVS--------------RSQEYQELYVRSFYLNSIDA 288 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 + +L +K + +D++ N L++RD ++ E+ +A DL +V L ++ Sbjct: 289 KRAMNLIKTVLKSK-DVYIDEKLNTLVMRDTAESIEIAEKLIASQDLIEPEVMLEVEVME 347 Query: 190 INEKSLRELGVKWTLADAQHAGGV-------GQVTTLGSDLSVAT-ATTHVGFNIGRING 241 IN +SL +GV++ +Q + GV G T LS+A + G + I+ Sbjct: 348 INRRSLENIGVRYP---SQVSVGVQGKTSSNGVSTNTPGRLSLAELKNFNSGLGVFTISD 404 Query: 242 RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFK 298 +L L L L Q +++A+P++ + + A I G +IP S S + +V + Sbjct: 405 PVLALNL--LHQDTDTNLLANPQIRVKNREKAKIHVGDKIPVFTSVANSTGFVSQTVNYL 462 Query: 299 EAVLGMEVTPTVLQKGRIRLKLHIS-QNVPGQVLQQADGEVLA--IDKQEIETQVEVKSG 355 E + ++V PT+L + ++ +K+ + N+ QV + D VLA I + T +++K+G Sbjct: 463 EVGIKLDVEPTILLQDQVNIKVGLEVSNITDQV--KTDTGVLAYTIGSRNANTTLQLKNG 520 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ET L G+F ++ + VP L +P+ G+LF + + E+V+ ITPR++ Sbjct: 521 ETQILAGLFRDDGQNISNKVPGLSSLPFIGRLFTDKNNDKRKNEIVLLITPRIL 574 >UniRef50_C9LMV3 Bacterial type II and III secretion system protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMV3_9FIRM Length = 449 Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 106/421 (25%), Positives = 191/421 (45%), Gaps = 58/421 (13%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 +P +L V + P+ +VL++LAE N+V V+G+V+ L V K+AL ++ S G Sbjct: 44 EPSDFSLHVKNAPIQEVLRSLAELTGKNIVFGGTVTGSVTADLDHVTPKEALHAMLVSQG 103 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 LI R+EG+ L V + N RA +S L YA+A E+A+ G + Sbjct: 104 LIAREEGSTLIVVGESAMKNG--------GRA-------TKSYKLSYAEAKEVAE-GLRQ 147 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 LS + ++ N ++L + + +D+P QV++ A ++ +N +ELG Sbjct: 148 LSDSVHVAYNQTANAVILSGTPLEIMETAAVLRSLDVPEKQVKVEAEVIAVNRSHSKELG 207 Query: 200 VKWTLADAQHAGGVGQ-----------VTTLGSDL------------------SVATATT 230 + W D + G G+ VT ++ +V Sbjct: 208 IDW---DFKALTGSGEYRRESWNEQRYVTDDAGNIKYDKNGNPRMRNIEHNGWNVKIPEG 264 Query: 231 HVGFNIGR-INGR----LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 + G + GR + G L+AL + I+A P ++ + + A I G++IP V Sbjct: 265 YAGISYGRSVAGHPYTAFFRANLNALVSTGKARILARPNVVTMNGREAEILIGNKIPVIV 324 Query: 286 SSGESG--ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 ++G T+ E+++A + + TP + G I ++ + P V + ++ Sbjct: 325 EHVDNGVRTTTTEYRDAGIKLTYTPRISADGEITANVNAEVSTPYLVPEMRAYRIIT--- 381 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 ++ T V ++SG+ L +GG+ ++ VP+LGDIP G+LF+ + E E+V+ Sbjct: 382 RQANTLVRLRSGDMLTIGGLIDKEENKTFRKVPILGDIPLLGKLFQSKSRSVEESEIVII 441 Query: 404 I 404 I Sbjct: 442 I 442 >UniRef50_C1TME7 Type II secretory pathway, component HofQ n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TME7_9BACT Length = 570 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 104/414 (25%), Positives = 191/414 (46%), Gaps = 42/414 (10%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQALQTVVKSAG 79 +++++ V + V + LA+ K+N+V+ P V+ +++ + P ++ +++ G Sbjct: 163 RRISVDFRSVDIQDVFRMLADMMKVNIVLDPSVAEIPPLTMRFDEAPLREVFGYLMRLYG 222 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 L + G L + S I++ E+ + R + Y+D L L Sbjct: 223 LSYAKVGKTLVIGS----PEGISKVMGEE---------KTRVYDVAYSDVKTLPDMLGGL 269 Query: 140 LS-AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 + K +TVD+R RL ++ ++ LS E+ + +D P QV L A I+ I +++ EL Sbjct: 270 TTIPKEKITVDERLGRLFVKGSENQLSDFERVLQTVDDPGKQVMLRARIIEIKDEASDEL 329 Query: 199 GV-------KWTLADAQHA--GGVGQVTTLGSDLSVATATTHVG---F------NIGRIN 240 W L+ + GG V S + T G F +IG Sbjct: 330 ETMLNAVYKHWWLSTSSSGAEGGYSYVKDPDS-YNPPTGEDRPGGIEFPGIEIPDIGTGG 388 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 RLLD L AL + ++A+P ++ Q ASIK + Y + ++G + +E Sbjct: 389 IRLLDTGLKALVTANKGKVLANPSVITVSGQKASIKLVENLKYISARDDAGNPTYSDEEV 448 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG----EVLAIDKQEIETQVEVKSGE 356 +E TP V + G I ++L I+ G+V+ +G E ++E+ T + V+ GE Sbjct: 449 GPKLEFTPLVGRDGVISVELSIAT---GEVIAWKEGNQGEEFPQTSEREVVTSIRVRDGE 505 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +GG+F ++ +P+LGDIP G+ F+ K D+R E+V+ + P +++ Sbjct: 506 PFVVGGLFNERHTENTTKIPILGDIPLLGEFFKSKSKTDDRTEVVMVVIPYILN 559 >UniRef50_D2QZA3 Type II and III secretion system protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZA3_9PLAN Length = 854 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 113/424 (26%), Positives = 201/424 (47%), Gaps = 50/424 (11%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV 75 ++ A + + V D + +VL+ L++Q LN++ S V+GTV+ L++V + AL ++ Sbjct: 167 IETAADDSLHINVKDSDIREVLELLSQQGGLNILASKSVTGTVTATLSNVDLETALAAIL 226 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 KS G + R+EGNIL + + + + Q A++ L R Y A ++ K Sbjct: 227 KSTGYVARREGNILYIGT--PDDFSTMDQTADR--------LITRVYRPNYVAAADVEKL 276 Query: 136 GEKLLSAK-GSMTVDKRT-------------------NRLLLRDNKTALSALEQWVAQMD 175 LL+ + G +TV + + +++RD + + L+Q ++D Sbjct: 277 FTSLLTPEVGKVTVSSPSEIDIPGDQVKTGGNGFAGADVVIVRDYENVIKQLDQVFIEID 336 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKW-TLADAQHAGGVG--QVTTLGS-DLSVATATTH 231 + QV + A I+++ +GV + L D + V +T L + DLS Sbjct: 337 VKPRQVLIEAMILSVRLSDNMTMGVNFEALRDKNNVRLVSGSPLTDLANIDLSEG----- 391 Query: 232 VGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY-QVSSGES 290 G +G ++ L + + ALE ++IASPRL+ + Q A I+ G ++ Y + E+ Sbjct: 392 -GLKLGFLDASLA-VFIDALETVGDTNVIASPRLMCLNKQRAEIQIGEQLGYVSTTVTEN 449 Query: 291 GAT-SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ---EI 346 AT SV F + + + P + G IRL++H + ++Q L I + ++ Sbjct: 450 SATQSVNFLDVGTLLRLRPNIANDGLIRLEVHPELSTGTVSIEQG----LTIPNKTVTQV 505 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 T V G T+ LGG+ + + +P LG +P G FR + ER E++V +TP Sbjct: 506 TTNVMCADGCTVILGGLIRQDLTNNTSQIPFLGSLPLVGPAFRQKTETQERTEIIVLLTP 565 Query: 407 RLVS 410 R+VS Sbjct: 566 RIVS 569 >UniRef50_B6QWW0 General (Type II) secretion pathway (GSP) D protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QWW0_9RHOB Length = 749 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 160/329 (48%), Gaps = 27/329 (8%) Query: 98 NNNIARQEAEQARAQANLPLENRSITLQYADAGEL------AKAGEKLLSAKGSMTVDKR 151 N + AR+ A ++ P E+ SI+ ++++A +L A + + +K + D R Sbjct: 411 NGSSARKFPVSANGESVGPAED-SISNRFSNANKLFDGLTDAPSNRVAVGSKVGIVADSR 469 Query: 152 TNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG 211 N LL+ + V +DLP+ QV + A I +N GV+W LA AG Sbjct: 470 NNALLVNSTYKEFKHIRDVVQALDLPLSQVVIEATIAEVNINDNLSYGVQWYLAKGNFAG 529 Query: 212 GVGQVTTLGSDLSVATATTHVGFN-IGRINGRLLDLELSALEQKQQLDIIASPRLLASHL 270 G+G V G+ A + N +G +D+ L AL+ ++ +I+SP L Sbjct: 530 GIGAVAD-GASRPTKAAGGALSLNTVG------VDVVLKALQNITKVKVISSPYLTVLDG 582 Query: 271 QPASIKQGSEIPY----QVSSGESGAT---SVEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 + A + G ++P+ Q SS + T V+ K+ + ++V P + + L+ I Sbjct: 583 RKARLVIGDQVPFASRSQSSSNDGNVTVTNEVDVKDTGIVLQVEPNIRSNNSVLLQ--IQ 640 Query: 324 QNVPGQVLQQADGEVLA--IDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDI 381 Q V V + + L I + I + + V+SG T+ LGG+ + ++G+ VP+L I Sbjct: 641 QEVSNVVQNKTEEGSLTPTIATRTINSDIVVESGRTILLGGLIQERKENGESGVPILRKI 700 Query: 382 PWFGQLFRHDGKEDERR-ELVVFITPRLV 409 P FG+LF+ + D RR EL+V ITPR+V Sbjct: 701 PVFGELFKENTTNDTRRTELLVMITPRVV 729 >UniRef50_O67320 General secretion pathway protein D n=1 Tax=Aquifex aeolicus RepID=O67320_AQUAE Length = 625 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/282 (27%), Positives = 148/282 (52%), Gaps = 21/282 (7%) Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 DKRTN L+L K+ A+ +++ ++D Q+ L+A I+ + KS+ E G++W + Sbjct: 304 DKRTNSLILYATKSEYEAVREFIKKIDKRRKQLLLTATIIEASAKSILEAGIRWQIL-GT 362 Query: 209 HAGGVGQVTTLGSDLSVATATTHV--GFN-------IGRINGRLLDLEL--SALEQKQQL 257 H G + ++L + + V GF+ IG I+ DL S LEQ Sbjct: 363 HGGAAFKGSSLQDVYNAIKSGNFVIGGFSKSGTTVSIGGIDFFFPDLVFLFSLLEQGTGF 422 Query: 258 DIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTVLQK 313 +++++P++L Q A IK G +P+ + + + ++K+ L +++TP + + Sbjct: 423 NVVSNPKILTLDNQEALIKVGQVVPFPTGIKYDVNGNPIITYDYKDVGLELKITPRITGE 482 Query: 314 GRIRLKLHIS-QNVPGQVLQQADG---EVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 +RL + + Q + G + + G V +E+ + V V++G T+ +GG+ +RK+ Sbjct: 483 -TVRLVIELKLQEITGYLTNEVSGVNYTVPITSNRELNSDVVVENGRTVVIGGLISRKSL 541 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + +P LGDIP G+LFR+D E ++ L +F+TP +++S Sbjct: 542 KSTEKIPGLGDIPVMGRLFRYDRDEKDKTSLFIFLTPYVITS 583 >UniRef50_C0QUI7 Fimbrial assembly protein PilQ n=1 Tax=Persephonella marina EX-H1 RepID=C0QUI7_PERMH Length = 608 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 128/242 (52%), Gaps = 14/242 (5%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD----LSVATATTHVG-- 233 Q+ + A IV I R+LG++W A + AG +G T G+ VG Sbjct: 367 QIAIEARIVQIESSYKRDLGIQWGFAASGGAGNIGYGVTTGTATGYMFDFPAGNVDVGKG 426 Query: 234 --FNIGRINGRL--LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV--SS 287 +IG + G LD++LSALEQ + I++ P+++ + A I QG E+PY ++ Sbjct: 427 ASMSIGIVRGLTTSLDIQLSALEQIGKSRILSRPKVITIDGEGAEISQGIEVPYSTFGAA 486 Query: 288 GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIE 347 G + V+FK+A+L + V P G I + + ++Q+VP +A I+ + I Sbjct: 487 GGAAIARVQFKKALLKLNVIPRTTLDGNIIMNIELTQDVPD--FGRAVNGQPPINTKSIT 544 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 ++V K G T+ +GGI + + ++ VP L ++P FG LF++ G +EL++FITP+ Sbjct: 545 SKVIAKDGTTIVIGGILEKTEQETENGVPGLRNVPLFGWLFKNKGINTTNKELLIFITPK 604 Query: 408 LV 409 ++ Sbjct: 605 II 606 >UniRef50_B5JQS4 Bacterial type II and III secretion system protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQS4_9BACT Length = 582 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 113/466 (24%), Positives = 195/466 (41%), Gaps = 99/466 (21%) Query: 30 DVP---VAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEG 86 D P + VL+ +A+ LNLVV + GT S+ L DV W+Q V+ G +EG Sbjct: 107 DYPNEEIRTVLRNVADLYSLNLVVPDTLIGTTSIKLRDVTWRQIYSVVLDPVGYTFIEEG 166 Query: 87 NILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELAKAGEKLL--SAK 143 +I+ + S R N+ P + YA+A +A L+ S Sbjct: 167 SIIKIVS----------------RDALNIEPPITEIFMVNYAEADSIASTLRNLVDSSKG 210 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI----------NEK 193 G++ VD R+N L++ + + + + Q V ++D P QV + + + N Sbjct: 211 GAVQVDTRSNALIVSERASKMEDIRQVVERLDKPTQQVFIETRFIEVTNTDVKNIGVNWS 270 Query: 194 SLRELGV-------KW-----------TLADAQHAGGVGQVTTLGSDLSVATATTHVGFN 235 +LR GV +W + D + V VT GSD S+ G Sbjct: 271 TLRNYGVSVGNINKQWGDSFQRQRSQGSNEDKNASTNVEGVTFEGSDSSLEGVGVRNGIL 330 Query: 236 IGRINGR-----------------------LLD------------------LELSALEQK 254 + G L+D LSAL+++ Sbjct: 331 RNNLTGETIIDATSVGESTLISSAVKDLYSLVDTSGLNRSSSAVFTADQFGFVLSALKEQ 390 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIP-----YQVSSGESGATSVEFKEAVLGMEVTPT 309 ++++P ++ + Q A I G + P Y +G + EFK+ + ++VTP+ Sbjct: 391 GGSRLVSNPTVVTLNNQEAMISVGEQFPIPNYQYNEETGGFEVSGFEFKDIGIILKVTPS 450 Query: 310 VLQKGRIRLKL--HISQNVPGQVLQQA-DGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 V G I +K+ +S + A + + I + ET++ +K G T+ +GG+ Sbjct: 451 VNHTGLITMKVVPEVSSRTGERSFGGAGNASIPIISTRRTETRIALKDGFTMGIGGLMES 510 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 ++ VP+LG +P G+LF+H+ K + +R L++FIT R++ SE Sbjct: 511 TGTEDKNHVPVLGKVPGLGRLFKHESKSETKRNLLIFITARILPSE 556 >UniRef50_A8EVV0 General secretion pathway protein D n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVV0_ARCB4 Length = 478 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 99/431 (22%), Positives = 210/431 (48%), Gaps = 40/431 (9%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MK+ I +LL+ + ++ + D+ V +++ ++ K N++V+ ++ V Sbjct: 1 MKK-IFIVLLLFFYALNLYSNDEININFKDIKVDDLIKITSKITKRNILVTQIINEKVDY 59 Query: 61 ----HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 +T L+T++K G +E +L V + I ++E + Sbjct: 60 IPTQKITKENLFDILETILKEKGYFLVEENGVLKVKKVE-----IIKEEEQFTEV----- 109 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKG-------SMTVDKRTNRLLLRDNKTALSALEQ 169 I L+ D + K + +++ K +++D +N L++ +K L ++ Sbjct: 110 -----IGLKNVDGVNIIKILDDVVNKKYINKTIKPFVSLDLESNSLVVMASKDELKQIKD 164 Query: 170 WVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ-HAGGVGQVTTL--GSDLSVA 226 + ++D QV + A I+ +N + + ++G+ + + +A + G+ +++ G ++ Sbjct: 165 LIQELDKEKAQVYVQAKIIEVNNELVNKIGISYGIINASARSDGINAISSNLNGGSNAIK 224 Query: 227 TATTHVGFNIGRIN---GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 A +G + +N G L L+ L+Q LDI++ P +LA + +SI G +I Sbjct: 225 EAVDTLGIRMSDVNIKSGLALGASLNLLQQNGALDIVSEPSILAIDNKESSIYVGEKISV 284 Query: 284 QVSS----GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG-QVLQQADGEV 338 ++SS G T+ E ++ L ++V P + +L L I+ + G + + G+ Sbjct: 285 EISSTLTDGGLQRTNYEREDIGLTLKVKPRI--SSDTKLTLEINTLLEGIKSTSVSAGQN 342 Query: 339 LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR 398 K+EI+T + +GE++ +GG+ KN++ + VP+LGDIP FG+LF++D K +++ Sbjct: 343 PDTLKKEIKTAAILNNGESVIIGGLIENKNETIEQKVPVLGDIPLFGELFKNDSKMNKKN 402 Query: 399 ELVVFITPRLV 409 LV+ +TP ++ Sbjct: 403 NLVIIVTPYMI 413 >UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE34_DESAA Length = 716 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 31/307 (10%) Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 KA ++S ++ DK TN +++ +K L+ + ++D+P V + A I+ ++ Sbjct: 352 KAEAPVVSKDVQISADKATNSIIIVADKEDFKVLKDVIEKLDIPRSMVYIEALIMEVSTD 411 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTL----------------GSDLSVATATTHVGFNIG 237 ELGV+W L D G V ++++ A F++G Sbjct: 412 KAFELGVEWRLGDNFEVNGDQAVGWAGSGGAGSEGAYTLFPTTAEIASGVAGFPTAFSMG 471 Query: 238 RI--NGRLLDLE-------LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----Q 284 I N ++ D+ + A + + I+++P +LA++ + + I G +PY Sbjct: 472 VIGENIKIGDIYFPTLGAVMRAYKNDSDVHILSAPHILATNNEESEIYVGKNVPYVTRQD 531 Query: 285 VSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 SS TS E+++ + +++TP + Q+ +RL + Q V + K+ Sbjct: 532 TSSSSVDYTSYEYRDVGVTLKITPQISQERLVRLDVF--QEVTRLIETAGTTTQPTTYKR 589 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 + +T V VK G T+ +GG+ + G VP LGDIPW G FR ++ E+ L VF+ Sbjct: 590 KADTTVIVKDGNTIVIGGLIDESTEGGTYKVPCLGDIPWLGWAFRSKTEKREKTNLYVFL 649 Query: 405 TPRLVSS 411 TPR++ + Sbjct: 650 TPRIIQT 656 >UniRef50_B4D9V8 Type II and III secretion system protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9V8_9BACT Length = 621 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 108/437 (24%), Positives = 196/437 (44%), Gaps = 75/437 (17%) Query: 32 PVAQVLQALAEQEKLNLVVSPDVS---GTVSLHLTDVPWKQALQTVVKSAGLIT-RQEGN 87 P+ VL+ LA Q K+N+VVS V+ GTV++ + D +A++ +V+S GL+ + +G+ Sbjct: 124 PIDLVLRTLARQAKMNIVVSDKVAQSAGTVNMRIEDKTPAEAIEIIVESKGLVMDKGKGD 183 Query: 88 ILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMT 147 + + + +A P E+ S T YA A + + L + + Sbjct: 184 VYYIKT---------------PEEKAKEPTESGSYTFSYAQAEKAVPLLQTQLQSGVAPQ 228 Query: 148 VDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW----- 202 D+RTN + R+N++ + ++ ++ +D P QV + A +V + + G+ W Sbjct: 229 FDQRTNTIFYRENRSNVDKVKAFLVSIDSPTQQVMIEARLVEVTANPKQSYGINWGGTVG 288 Query: 203 -------------TLADAQHAG-----GVGQVTTLGSDLSVATATTHVG-------FNIG 237 T+ +Q GQVT + + + T G G Sbjct: 289 SSSTPQTFSYGAPTVPGSQSVNLQTNPTTGQVTPVIVNSQLPQLVTTNGKLTPGDFLMNG 348 Query: 238 RINGRLLDL---------------ELSALEQKQQLDIIASPRLLASHLQPASIK--QGSE 280 G DL L L + + +A PR++ ++ Q A+IK + Sbjct: 349 ETRGGFGDLLASQFAILTVPSMSATLRLLNEDSDAEFLAHPRVVTANNQKATIKIVRNQP 408 Query: 281 IPYQVSSGESGATSV--EFKEAVLG--MEVTPTVLQKGRIRLKLH--ISQNVPGQVLQQA 334 IP Q++ E A +V F++ G + VTP++ + I + + IS V + Sbjct: 409 IP-QLNFNEQTAQAVFSGFQDKEFGNTLIVTPSINKDDFISMSVQPEISNKVADATFTFS 467 Query: 335 DGEVLA--IDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 V + IDK+ +++ V +KSG+TLA+GG+ + G+ VP++GDIP G F+ Sbjct: 468 GATVTSPVIDKRTLDSNVVIKSGDTLAIGGLLQDEVTKGRTKVPVIGDIPILGYAFQERL 527 Query: 393 KEDERRELVVFITPRLV 409 +R L++F+TP ++ Sbjct: 528 NVRTKRNLLIFVTPTII 544 >UniRef50_A8URL9 Putative type II secretion system protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URL9_9AQUI Length = 518 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 109/437 (24%), Positives = 195/437 (44%), Gaps = 63/437 (14%) Query: 32 PVAQVLQALAEQEKLNLVVSP--DVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNIL 89 P+ +VL A+A+ LNL+VSP DV+ T++ +VP K+AL+ ++ GL GN+L Sbjct: 85 PLTKVLYAIADGSGLNLIVSPEVDVNRTITATFNNVPMKEALEIIMDMTGLYYEVRGNVL 144 Query: 90 SV-------------HSIAWQNNNIARQEAEQARAQANLPLENR---------------- 120 V H+ N+++ A Sbjct: 145 YVKEFMTKTFRIPYIHTTTNFNSSLGGDVLGGALTSGGTYGTATTGVTAGTTGGIGATGL 204 Query: 121 --SITLQYAD---AGELAKAGEK----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 + TL Y + A +L K E+ +LS +G +++ T L++ D + + +E++V Sbjct: 205 RGNFTLDYKNPEGANDLYKQLEENVKNMLSKEGKFVLNRFTGTLVVTDRRRNVERIERFV 264 Query: 172 AQMDLPVG-QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATT 230 +G QV + A IV I + + G+ W+ + G G TL LS+ T Sbjct: 265 KGFVRKIGKQVLIEAKIVEIALSDVFQYGIDWS-TFFRDVFGTGANVTLSQTLSIPTGGF 323 Query: 231 HVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY------- 283 F++ ++ L ++AL ++ +++PR++ S+ Q A I G P+ Sbjct: 324 ---FSLNVVSSDFSTL-VNALATYGKVYTLSNPRIMVSNGQTALIATGIVTPFFERQAVT 379 Query: 284 ----QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKL-HISQNVPGQVLQQADGEV 338 + + E VL + VTP + G I + + ++ + G + +G+V Sbjct: 380 ITGTTTTQIQENIVKTNVLEGVL-LGVTPYIDDNGSIVMNIIPVATRLEGSKTLEVNGQV 438 Query: 339 LA----IDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 LA ++ +E T V V++GE + +GG+ + VP LGDIP G LF+ Sbjct: 439 LAEAPILNIKETGTIVRVRNGELVVIGGLIGDVRSVQERKVPGLGDIPVLGYLFKSKRTV 498 Query: 395 DERRELVVFITPRLVSS 411 E+REL++F+ PR++ + Sbjct: 499 KEKRELIIFLRPRIIDN 515 >UniRef50_C1DU75 PilQ n=3 Tax=Sulfurihydrogenibium RepID=C1DU75_SULAA Length = 604 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 132/262 (50%), Gaps = 34/262 (12%) Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWT-LA------DAQHAGGVGQVTTLGS----- 221 +D P Q+ + A IV I+ K++++LG++W LA + + G + L + Sbjct: 349 LDRPY-QISIEARIVQISSKNVKDLGIQWGGLASNIDNNNTKIIAGTNSTSYLANYRPGS 407 Query: 222 ----DLSVATATTHVGFNIGRING---RLLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 D + GF++G I G LD+ LSAL+ + I++ P ++ + A Sbjct: 408 AYAVDFPAVQSKIPGGFSLGFILGGTQNFLDIRLSALQSIGKSKILSKPSVITIDGETAE 467 Query: 275 IKQGSEIPYQ--VSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQ 332 I QG EIPY V++G +SV FK+AVL + VTP G I + L I+Q++P Sbjct: 468 ISQGYEIPYTTAVAAGGGTVSSVSFKKAVLKLNVTPRTTADGNIIMDLIITQDIP----- 522 Query: 333 QADGEVLAIDKQEIETQ-----VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQL 387 D + L + I+T+ V K G + +GGI + + VP L +IP G L Sbjct: 523 --DFKNLLLGNPPIQTKTVTSKVVAKDGSVVVIGGILEKTEDTQTSGVPGLMNIPILGNL 580 Query: 388 FRHDGKEDERRELVVFITPRLV 409 F+ + K+D EL++F++P++V Sbjct: 581 FKENFKQDTSTELLIFLSPKIV 602 >UniRef50_C9RLY9 Type II and III secretion system protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLY9_FIBSS Length = 603 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 103/387 (26%), Positives = 188/387 (48%), Gaps = 40/387 (10%) Query: 31 VPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILS 90 V + VL+A+AE+ LNL V D++ TV + DV + L ++ + + R + + L Sbjct: 223 VSLKAVLKAIAEEAGLNLAVYGDLNETVQMSFKDVSLPELLASLFRGSAFTFRLDSSSL- 281 Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE-LAKAGEKLLSAKGSMTVD 149 W + E A+A A++ R +L++ + +A+ + + ++ +++ Sbjct: 282 -----WVSE-------EGAKALADV----RVFSLKHVSPEKAMAQLSKFMKGSELNVSEY 325 Query: 150 KRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQH 209 + N L+L + A++ E+ + +D+P QV L+ IV + +GV+ ++ Sbjct: 326 REQNALVLGGSPRAIARAEELLKMVDVPQMQVTLACVIVEFRKGRSFAIGVRS--GATRN 383 Query: 210 AG-----GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPR 264 G G LG D+S + A +G R +LELS++E+ + ++A PR Sbjct: 384 VGERDIQARGFFDFLGKDISKSGAFGKIGILPDR-----FELELSSMEENNEAKVLARPR 438 Query: 265 LLASHLQPASIKQGSEIPYQVSSGESGATSV----EFKEAVLGMEVTPTVLQKGRIRLKL 320 + + A + + + Y VS + + F + + +E+TPT+ Q G I L + Sbjct: 439 VTTLNGNKAELNVTNTVYYLVSQVSADGYPITDYRSFNDGI-SLELTPTMTQDGLITLSV 497 Query: 321 HISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG-QDSVPLLG 379 G+ DG I + ++T V ++ GETL LGG+ RKNK+ + +VP LG Sbjct: 498 SPEIKTAGR--STGDGP-RDISSRNMKTTVVLRDGETLCLGGLI-RKNKTEVRSAVPFLG 553 Query: 380 DIPWFGQLFRHDGKEDERRELVVFITP 406 IP G+LF + +E++ EL +FITP Sbjct: 554 SIPILGRLFSYTSEEEDESELAIFITP 580 >UniRef50_Q7UHD1 General secretion pathway protein D (OutD) n=1 Tax=Rhodopirellula baltica RepID=Q7UHD1_RHOBA Length = 822 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 91/306 (29%), Positives = 149/306 (48%), Gaps = 27/306 (8%) Query: 122 ITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQV 181 +T Q+ +A E+ ++ E L ++V + NR+L++ N+ L Q Q+D+P QV Sbjct: 300 LTPQFTEASEMRESLEGALGEGTIVSVYEAENRILIKGNRAQLELASQAFKQLDVPRAQV 359 Query: 182 ELSAHIVTINEKSLRELGVKW------------TLADAQHAGGVGQVTTLGSDLSVATAT 229 ++A I ++ + L ELGV W LAD AG V + T G+ L A+ Sbjct: 360 RITALIYDVSLEELEELGVNWGRGFRLDTTDESALADL--AGNVEKAVTFGT-LGSGGAS 416 Query: 230 THVGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 + F I + + L AL+ + ++A P + A + ASIK +IP +S Sbjct: 417 S---FGIRTLTDTFDTSVLLRALDSSDEAKLLADPSITAIDRREASIKIVQQIPIVAASP 473 Query: 289 ESGAT----SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 G+ VEFK+A + ++VTP + I L++ +V +V + + V ID + Sbjct: 474 AEGSNVVFAQVEFKDAGIILKVTPRISNDNTIELQVQPEYSV--KVGEIENNPV--IDSR 529 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 ET V V +G LGG+ ++ G VP L D+ + G+LFR E EL+VF+ Sbjct: 530 TAETTVRVANGHMFTLGGLRQKRIIEGTSGVPYLRDLKYVGKLFRSHSTEVRESELIVFL 589 Query: 405 TPRLVS 410 P ++S Sbjct: 590 KPEIIS 595 >UniRef50_A6C2R4 Type IV pilin multimeric outer membrane protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2R4_9PLAN Length = 799 Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 103/428 (24%), Positives = 187/428 (43%), Gaps = 51/428 (11%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 + +L + D + QVL L E LN++ V+GT+S +L +V QAL +++S L Sbjct: 279 ETFSLQIQDAEIMQVLDMLGELSGLNILTGQGVTGTISANLKNVTPAQALDAILRSRDLT 338 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPL----------------ENRSITLQ 125 + +EG + V + A + ++ + + + P EN I + Sbjct: 339 SEKEGEFIYVMTQAQLE--LKKKSSRKVITKLYSPFYISAKELQNLITPILTENVGI-VS 395 Query: 126 YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 E+ A + + S +T+ +L+RD L +++ + +MD+P QV + A Sbjct: 396 LTSPSEVGIAPDPTSAGGDSFA---QTDSILVRDYPEILEEVDRLLEKMDIPPMQVVIEA 452 Query: 186 HIVTINEKSLRELGVKWTLADAQHAGGV--GQVTTLGS-----------------DLSVA 226 I+++ + GV + + + V G TL + Sbjct: 453 MILSVALNDDMKFGVNFAMLGGNNKNLVVDGNGNTLNNASGFPGSGSSSIVPPTGQFIAD 512 Query: 227 TATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV- 285 A GF G I+G + ALE + ++IASP+L A + Q A + G I Y Sbjct: 513 VAGLKYGFLHGDISGFI-----EALEDVTETNLIASPQLRALNKQKAELIIGDRISYSTV 567 Query: 286 -SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 +G + +V F ++ + + + P + G+IR+++H ++ + + Sbjct: 568 TQNGNTSIQNVNFLDSGIVLNLRPFITPDGQIRMEVHPERS---SATINPSTNLPDLRTT 624 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 E+ T V V+ G T+ +GG+ + ++ VP LG +P G FR + R EL+V I Sbjct: 625 EVTTNVMVRDGHTVVIGGLIEERTSDTRNQVPFLGALPVIGNAFRQQREITNRTELIVLI 684 Query: 405 TPRLVSSE 412 TPR+V +E Sbjct: 685 TPRIVRAE 692 >UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gammaproteobacteria RepID=GSPD_AERHY Length = 678 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 18/285 (6%) Query: 143 KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW 202 K +++ D+ TN L++ ++ LEQ VA++D+ QV + A IV I + LGV+W Sbjct: 316 KLAISADETTNALVITAQPDVMAELEQVVAKLDIRRAQVLVEAIIVEIADGDGLNLGVQW 375 Query: 203 TLADA-----QHAG-GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE-------LS 249 + +AG G+G V D TT + NG ++ Sbjct: 376 ANTNGGGTQFTNAGPGIGSVAIAAKDYKDNGTTTGLAKLAENFNGMAAGFYQGNWAMLVT 435 Query: 250 ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV-----SSGESGATSVEFKEAVLGM 304 AL + DI+++P ++ + AS G E+P Q +SG++ +++E K + Sbjct: 436 ALSTNTKSDILSTPSIVTMDNKEASFNVGQEVPVQTGTQNSTSGDTTFSTIERKTVGTKL 495 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 VTP + + + L + + G+ DG D + ++ V VKSGET+ LGG+ Sbjct: 496 VVTPQINEGDSVLLTIEQEVSSVGKQATGTDGLGPTFDTRTVKNAVLVKSGETVVLGGLM 555 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + K VPLLGDIP G LFR +R L+VFI P ++ Sbjct: 556 DEQTKEEVSKVPLLGDIPVLGYLFRSTSNNTSKRNLMVFIRPTIL 600 >UniRef50_Q2JVP0 Putative type IV pilus secretin PilQ n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JVP0_SYNJA Length = 723 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 121/451 (26%), Positives = 200/451 (44%), Gaps = 69/451 (15%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLV---VSPDVSGTVSLHLTDVPWKQA 70 P V K+TL + D PV VL L + LN+V V PD+ T+SL + D P ++ Sbjct: 279 PPVDLGSNAKITLTLRDAPVGDVLSLLVRRAGLNVVLNDVPPDL--TISLDVADSPLQET 336 Query: 71 LQTVVKSAGLITRQEGNILSVHSI----------AWQNNNIARQEAEQ------------ 108 +++ L + G + + + ++ N + +E EQ Sbjct: 337 FNFILRLKELQATRVGQTVFIGTTLPGVGQQIVKTYRLNQLRIEETEQTFVFNASGTAGG 396 Query: 109 -------ARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNK 161 AR + P E RS L +A + A E + A D RTN L + Sbjct: 397 GGTVEIDARQLSITPSEIRSRILAILEASNIPLAQESAIQA------DPRTNSLTIVATP 450 Query: 162 TALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGS 221 T + ++AQ+DL QV +SA + IN + LGV A A G G T G Sbjct: 451 TQHDVIAAYLAQIDLRSRQVLISARFIEINLDNNSSLGVALGSASGNFALGSGDNTVFGG 510 Query: 222 ---DLSVATATTHVG-FNIGRINGRLLDLELSALEQK--QQLD---------IIASPRLL 266 D ++ +VG F G L+ L+ L+Q ++D I+A P+++ Sbjct: 511 TPLDQPAGSSVPNVGSFPAAGTGGSLVFNTLNRLQQSLAARIDAAIASGTAKILADPKVV 570 Query: 267 ASHLQPASIKQGSEIPYQV---SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 ++ A+I G E+ + +G ++V F++ G+ + ++Q RI +I+ Sbjct: 571 VANNTGAAIVVGQEVITNRRLQTDPATGISTVVFEKGNAGVNL---LIQNVRIDDNGYIT 627 Query: 324 QNVPGQV------LQQADGEVLAI-DKQEIET-QVEVKSGETLALGGIFTRKNKSGQDSV 375 N+ Q+ + +DG V+++ +++ + T Q +K ETL LGG+ +++ D V Sbjct: 628 LNLLPQISSIGSQITLSDGTVISLLNQRSVGTLQTRLKDRETLFLGGLIQEEDRVSVDKV 687 Query: 376 PLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 PLL +IP G LFR + R E+VV ITP Sbjct: 688 PLLSEIPLLGSLFRRQNTTNTRSEVVVLITP 718 >UniRef50_C6P0F2 Type II and III secretion system protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0F2_9PROT Length = 851 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 107/421 (25%), Positives = 192/421 (45%), Gaps = 34/421 (8%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV--SLHLTDVPWK 68 M +P +++ Q VTL D + V +AL+ +N+++ D+ + S+ + D Sbjct: 172 MQMPTLKSKFRQPVTLQFRDANLKMVFEALSRSSGINILLDRDMRNDLKASIFVKDASVA 231 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 AL ++ L E +L+ ++ N A+ + Q L R+ L AD Sbjct: 232 DALDLILMQNQL----EKKVLNDSTVFIYPNTPAKIKEYQD-------LVIRTFQLTNAD 280 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 A ++ + +L K + V+++ N L++RD A+ E+ +A D+ +V L ++ Sbjct: 281 AKQMQTMIKTMLKTK-DIYVNEKNNSLIIRDTPEAVKMAEKLIASQDINEPEVMLEVEVL 339 Query: 189 TINEKSLRELGVKWTLA---DAQHAGGVGQVTTLGSDLSVATATTHVGFNIG---RINGR 242 + L +LGVKW TT V T T V + ING Sbjct: 340 EVLHSKLTQLGVKWPNQLGLSVNATPATSTATTTSGGAVVTTNTPAVPLTVNGLRHINGD 399 Query: 243 LLDL-ELS-ALEQKQQL---DIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT---- 293 +++ LS L+ +++L +++ASPR+ + A I G +P +S AT Sbjct: 400 AINVTPLSMTLDLRKELGDSNLLASPRIRVKQHEKAKIMIGDRVPVITNSVTPVATGTPV 459 Query: 294 ---SVEFKEAVLGMEVTPTVLQKGRIRLKLHIS-QNVPGQVLQQADGEV-LAIDKQEIET 348 SV++ + L +EV P + G + +K ++ + QV A G V I + + T Sbjct: 460 VTGSVQYLDVGLKLEVEPDIHMDGEVAIKTYLEVSTIANQVTNAASGSVAYQIGTRNVNT 519 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 + +K GET L G+ +++ SVP LGD+P G LF +G + + E+++ ITP + Sbjct: 520 VLRLKDGETQVLAGLINDEDRKSSASVPGLGDLPILGHLFSSNGDDKRKTEIILSITPHI 579 Query: 409 V 409 + Sbjct: 580 I 580 >UniRef50_Q1H1N3 Type II and III secretion system protein n=2 Tax=Methylophilaceae RepID=Q1H1N3_METFK Length = 653 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 89/408 (21%), Positives = 187/408 (45%), Gaps = 25/408 (6%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT--VSLHLTDVPWKQAL 71 P ++++ + ++L D+ + V + +++ +N ++ S+ L + P ++A+ Sbjct: 185 PHIRSSFKRPISLEFKDITIKSVFEFISQAAAINFTYDQELRSDQRTSVFLRNTPIEEAI 244 Query: 72 QTVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 ++ S L + N L ++ ++ QE ++ RS L DA Sbjct: 245 DVILASNQLGKKVLNDNTLLIYPLSRS------QEYQETFV--------RSFYLSNTDAK 290 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 +L + ++ K + +D++ N L++RD A+ E+ + D+ +V L ++ I Sbjct: 291 KLMAMIKTVVKTK-DIYIDEKLNTLVMRDTPEAIRTAEKLIMSQDMAEPEVMLEVEVLEI 349 Query: 191 NEKSLRELGVKWTLA---DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE 247 N +SL +G+++ D Q V TTL + N+G + L Sbjct: 350 NRRSLENIGIRYPTNVSLDVQGRDTVNGTTTLTPGKLTINELKNFNSNLGVFSISDPVLA 409 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGM 304 L+ L+Q +++A+P + + + A I G IP S S + +V + E + + Sbjct: 410 LNLLQQDTDTNLLANPHIRVKNREKAKIHVGDRIPVLTSVANSTGFISQTVNYIEVGVKL 469 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGI 363 +V PT+L + + +K+ + + ++ + G V I + T + +K GET L G+ Sbjct: 470 DVEPTILLRDEVSIKIGLEVSNQTDRMETSSGTVTYTIGTRNASTILRLKDGETQILAGL 529 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + VP L +P G+LF ++ + ++E+ +FITPR++S+ Sbjct: 530 MRNDEQKITNGVPGLSKLPLIGKLFNNNNNDLSKKEIALFITPRIISN 577 >UniRef50_B5S3N0 Gspd-related protein n=4 Tax=Ralstonia solanacearum RepID=B5S3N0_RALSO Length = 754 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 107/404 (26%), Positives = 189/404 (46%), Gaps = 31/404 (7%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQALQ 72 + AA + ++L D + QV + L+ LN V DV V++ L + + Sbjct: 176 ALSAAFRKPISLEFHDAQMRQVFEVLSRASGLNFVFDKDVRTDQKVTVFLRN----STVA 231 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 +VV + L + E +L ++I N A+Q Q PL R+ L +DA ++ Sbjct: 232 SVVNTVLLTNQLEQRVLDGNAILIYPNTPAKQRDYQ-------PLTVRTFVLSNSDAKDV 284 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 A + +L + + VD++ N +++RD A+ A E+ VA ++P +V L I+ + Sbjct: 285 ANTLKTILKTR-DIVVDEKRNMIVMRDTPDAIQAAEKLVAVHEMPEPEVMLEVEILEVKR 343 Query: 193 KSLRELGVKWT--LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSA 250 L++LG++ L+ A G TL DL H N RI + L ++ Sbjct: 344 SRLQDLGIQLPSQLSLTPLASSSGGTLTL-DDLR------H--LNPTRIGATVSPLNVNV 394 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIP-YQVSSGESG--ATSVEFKEAVLGMEVT 307 +++A+PR+ + + A I+ G +P +S +G A +V++ + L +EV Sbjct: 395 NAAVTDTNVLANPRVRTRNKEKARIQVGQRVPNVTTTSTATGFVAENVQYVDVGLKLEVE 454 Query: 308 PTVLQKGR--IRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 PTV IR+ L +S ++ QV ++ I + T + +K GE L G+ Sbjct: 455 PTVTPDNEVTIRINLEVS-DIISQVQTKSGSIAYEIGTRNATTLLRLKDGENQILAGLIQ 513 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +++ + VP LGDIP G+LF + E+V+ ITPR++ Sbjct: 514 DEDRVSGNRVPGLGDIPALGRLFGAQSDNKLKSEIVLSITPRVI 557 >UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBE1_9GAMM Length = 630 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 29/316 (9%) Query: 122 ITLQYADAGE-------LAKA---GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 + L Y DA E LAK+ +K + S+ K N L++ + L+ ++ + Sbjct: 268 VYLHYVDASEIVPILENLAKSIQSNQKDTDSNISIEASKSANALVINAPPSILTTMKSII 327 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLG--------SDL 223 +Q+D+ QV + A +V + + ++GV W + D ++ VG V TLG SD Sbjct: 328 SQLDIRRAQVMVEAILVEVRGELASDVGVTW-ITDPDNSI-VGAVNTLGNLPLANAPSDG 385 Query: 224 SVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 S + GF G NG L L AL Q +I+++P ++A + AS+ G +P+ Sbjct: 386 SALPFSAGRGFTFGYFNGGDLQAALRALSATQNANILSTPTIVAIDNEEASLLVGQNVPF 445 Query: 284 QVSSGESGA-------TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG 336 S A T++E ++ + VTP + Q I L++H + A Sbjct: 446 ITGQATSSASSTNDPFTTIERQDIGTSLVVTPRINQGDSITLEIHQKTETIAPSIDIASD 505 Query: 337 EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDE 396 + +K+EI T+ ++ + L +GG+ + + VPLLGDIP+ G LF G Sbjct: 506 --IVTNKREIITKALIRDDQVLVIGGLINDEETEIIEKVPLLGDIPYLGSLFSSKGTSHT 563 Query: 397 RRELVVFITPRLVSSE 412 + L+VFI P ++ + Sbjct: 564 KTNLMVFIHPTILKDD 579 >UniRef50_B9XBV8 Type II and III secretion system protein n=1 Tax=bacterium Ellin514 RepID=B9XBV8_9BACT Length = 612 Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 109/445 (24%), Positives = 186/445 (41%), Gaps = 76/445 (17%) Query: 26 LMVDDVPVAQVLQALAEQEKLNLVVSPDVS-------------GTVSLHLTDVPWKQALQ 72 +++D+VP+ ++ LA Q LN ++ P ++ VSL ++ QAL Sbjct: 134 IVMDEVPLTDAIKNLARQAGLNYMLDPKINYGVAGPDGKLNPQPMVSLRWENLTADQALN 193 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 V+ + L + IAR + A PL R I L+YA+ + Sbjct: 194 AVLGNYNLTIVDD-----------PRTKIARITVKDPAAPE--PLVTRVIQLKYANVTNI 240 Query: 133 AKAGEKLLSAKGS-MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +L K S + D RT++L++ L+A+++ VA++D QV + A +V + Sbjct: 241 VLNVTGVLQDKRSRVAADVRTSQLVVLATDRELTAVDELVAKLDTATKQVLIEARLVETS 300 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT------------------------ 227 + GV WT A G + L + + T Sbjct: 301 KNPTTAKGVDWTGTAAAQNVRFGNNSILAAPFTRGTPPTPANPFGTPDQQAVPSTILDPT 360 Query: 228 -----ATTHVGF--NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSE 280 A TH GF N +N LS L ++++PR + + A++ Sbjct: 361 QPMIAANTHNGFLPNTFFLNADGASAVLSFLNTDNDAQVLSTPRAVTLDNETATLSVTRA 420 Query: 281 IP-YQVSSG---ESGATSVEFKEAVLGMEVTPTVLQKGRIRLKL--HIS-------QNVP 327 P ++ ++G G + V + ++VTP + I L++ +S + V Sbjct: 421 QPIFKTTAGTQGSPGGSEVTYTNVGTILKVTPRISANKMISLRVIPEVSSVAGTDRKIVS 480 Query: 328 GQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQL 387 GQ+ E D + I+TQV + SG TL +GG+ + VPLLGDIP+ G Sbjct: 481 GQI-----NEADIFDVRHIDTQVLIPSGNTLVMGGLVSDDRTKSYIKVPLLGDIPYLGAA 535 Query: 388 FRHDGKEDERRELVVFITPRLVSSE 412 FRH+ K ++ L++F+TP +V +E Sbjct: 536 FRHESKTQNKKNLIIFVTPTIVETE 560 >UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Comamonadaceae RepID=A1TUQ3_ACIAC Length = 829 Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 145/287 (50%), Gaps = 25/287 (8%) Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 + D+ N +L+ K +E + ++DLP QV + A IV + + G++W Sbjct: 503 LMADELNNSVLVWGTKANYMKIEATLKRLDLPPTQVLIEASIVEVTLDDTLQYGLQWAFN 562 Query: 206 DA--QHAGGVGQV--------TTLGSDLSVATATTHVGFNIGRING-RLLDLELSALEQK 254 +A + G GQ+ T +GS + T++ GF+ N + + L+AL K Sbjct: 563 NAGPSNLNGAGQLLTNGPSDKTPIGSSIPTPTSS---GFSYALSNSLGSVRVVLNALATK 619 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPYQ-------VSSGESGATSVEFKEAVLGMEVT 307 + L +I+SP L+ A + G++ P + VS G S A ++++++ + + VT Sbjct: 620 RLLKVISSPSLMVLDNHTAMMSVGNQQPVKTGSLITSVSGGNSVADTIQYRDTGVSLAVT 679 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVL--AIDKQEIETQVEVKSGETLALGGIFT 365 P+V G + + + I Q V V + L +++I ++V V+SGE + LGG+ Sbjct: 680 PSV-NAGNL-VTMQIDQAVTDAVADNSGSISLQPVFQQRQITSKVAVRSGEAIVLGGLIR 737 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + S + VPLL DIP G LF ++GK R EL+V ITP++V ++ Sbjct: 738 DTSNSSKSGVPLLQDIPLVGSLFSNNGKTGNRTELLVVITPKVVRTD 784 >UniRef50_Q1V0G7 Type II Secretion PilQ n=2 Tax=Candidatus Pelagibacter ubique RepID=Q1V0G7_PELUB Length = 518 Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 105/437 (24%), Positives = 192/437 (43%), Gaps = 63/437 (14%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV--KSAG 79 Q V+ + + ++ ++E ++N++V DV+G++S L +VPW +A ++ K+ Sbjct: 96 QNVSFKFQALDFKEAMKLMSEVGQINILVGDDVAGSISAELDNVPWDKAFNALLDLKNYA 155 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEA-EQARAQANL----------PLENRSITLQYAD 128 NI+ V + A N+ QE + ARA A P+ + L Y Sbjct: 156 ADIDVASNIIRVSTPA----NLTSQEGYKSARASAVKKKVELEDSVEPIISEIFRLYYIT 211 Query: 129 AGELAKAGEKLLSAKGS--------MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 E +L ++ G+ +T + T +++R + L +++ + ++D Q Sbjct: 212 PSEAKATITELFTSVGTNGNFIPIQVTEEATTRSIIVRGKEKDLDIVDKVIREIDKRTKQ 271 Query: 181 VELSAHIV---TINEKSL-RELGVKWT-----LADAQHAGGVGQVTTLGSDLSVAT---- 227 V + A IV + E+SL + LG +T + Q VG + G+ LS +T Sbjct: 272 VLIEAFIVEATSTFEQSLGKRLGAAYTRKSLRMGGTQGGSSVGAASGTGAALSDSTGAFT 331 Query: 228 ---------------ATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQP 272 AT+ +G + + +L LEL LE + +++P+L Q Sbjct: 332 SGAGTDNLVNFGSAAATSGIGI-LKKTGSAVLKLELDFLEAQGLSKTVSNPKLFTLDNQQ 390 Query: 273 ASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQ 332 ASI QG I GE +A L + VTP ++ G + L + ++ + P Sbjct: 391 ASINQGETIYIDGGEGEDKPV-----DASLKLIVTPNIIGDGNVMLSIQVNNDTP----N 441 Query: 333 QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 +A+ + ++K EI T++ V G+ + +GGI + + VP +P G++ Sbjct: 442 RANAASVGVNKMEINTKLLVADGDIVVIGGIKKNNVANNRQGVPGTSKVPILGKVLSGKS 501 Query: 393 KEDERRELVVFITPRLV 409 D EL+VFI PR++ Sbjct: 502 NSDTMNELLVFIAPRIL 518 >UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKZ0_MARMM Length = 686 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 20/297 (6%) Query: 124 LQYADA-GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE 182 Q DA GE + GE+ ++ ++ D+ N L++R + V +MD+ QV Sbjct: 369 FQGDDAHGEPSAPGEE--QSRLTIIPDELNNALIIRATDQEYREILDLVQRMDVMPPQVL 426 Query: 183 LSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL-GSDLSV-ATATTHVGFNIGRIN 240 + A I + + + GV+W +A G + ++L SD + +TA GFN + Sbjct: 427 IEATIAEVRLEDGLDFGVRWYFENA----GSNETSSLQFSDSNTGSTAPVFPGFNYA-FS 481 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGA---T 293 G L LSAL + ++++P ++ + Q A ++ G E+P S ES A + Sbjct: 482 GTDLTATLSALRSITDVTVLSAPSIMVQNNQTAHLQVGDEVPIVTQTATSVTESNAPIVS 541 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG-EVLAIDKQEIETQVEV 352 SVE +E + ++VTP + G + L ++Q V G + I K E + V V Sbjct: 542 SVELRETGVILQVTPRINASGMV--VLEVNQEVSSVRPTTTSGIDSPTIQKLEFTSTVSV 599 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +S T+ALGG+ + PLLGDIP G LFR+ +R ELV+F+TPR++ Sbjct: 600 RSSNTIALGGLIRETTSDNESRTPLLGDIPGVGNLFRNRAMTSQRSELVIFLTPRII 656 >UniRef50_C9LRH4 Putative secretin and TonB short domain protein n=2 Tax=Selenomonas RepID=C9LRH4_9FIRM Length = 462 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 109/432 (25%), Positives = 192/432 (44%), Gaps = 43/432 (9%) Query: 6 AALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDV 65 A L G A +TL V D V +L ++A L+L++ V G +SL L DV Sbjct: 24 AFFLAAWFAGALPAAASPLTLEVVDADVTALLTSIARLSGLDLILDDSVKGRISLSLKDV 83 Query: 66 PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARA------QANLPLEN 119 ++AL + ++ GL + EG +L V + A++ A R A+L Sbjct: 84 EPEEALMLISRAKGLAVQHEGKVLLVRA--------AKEAAPFYRMHVLPVHHADLDTAF 135 Query: 120 RSITLQYADAG-----ELAKAGEKLLSAKG------SMTVDKRTNRLLLRDNKTALSALE 168 ++ L +AG E K G++ +S +G + +D+ TN LL + + E Sbjct: 136 AAVKLSLGEAGISAIDENKKNGKEDISEQGLYRTGERLLIDRATNALLFYGTEEEKARAE 195 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW---TLADAQHAGGVGQVTTLGSDLSV 225 + +D+P QV L A +V + + + +ELGV W L H G + GS + Sbjct: 196 AVLHSLDVPTEQVSLEARVVALEKNAAKELGVDWDWSPLPIDPH--GTSKSGAEGSRRGI 253 Query: 226 ATATTHVGFNIGRI-NGRLLDL----ELSALEQKQQLDIIASPRLLASHLQPASIKQGSE 280 V GR G+ + +++AL + +++A P + + A I G Sbjct: 254 DGEVPGV-IRFGRTPEGKPYEFYYRAKIAALITDGKANVLARPNITTLQGREAVINIGGS 312 Query: 281 IPY--QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG-E 337 +P ++ + TS+ +K+A + + TP + + G I ++H + P V D + Sbjct: 313 VPVPETQTTNSTVTTSITYKKAGIILRYTPRIHENGEITARVHTEVSSPVYV----DALK 368 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 ++ +T V +K GET+ +GG+ + VPLLGDIP G F+ + Sbjct: 369 AYKFQERSADTTVRLKDGETMVIGGLIGSEESRVFAKVPLLGDIPILGTFFKSVRRTKTD 428 Query: 398 RELVVFITPRLV 409 E+++F+T ++ Sbjct: 429 SEIMIFLTAHIL 440 >UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIY3_THIDA Length = 656 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 106/411 (25%), Positives = 190/411 (46%), Gaps = 38/411 (9%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDV--SGTVSLHLTDVPWKQALQTVVKSAG 79 + +TL D P+ V +A Q LN V DV +L + P +A+ ++ + Sbjct: 181 KPITLEFRDAPLRNVFDMIARQSGLNFVFDKDVRLDTKATLFARNTPIDEAVDMLLMTGQ 240 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 L + +++ +++ + +Q+A Q L +S L ADA L Sbjct: 241 LSKK----VVNANTLLIYPDQPQKQKAYQE-------LMVKSFYLGNADAKATMAMLRTL 289 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 + AK + VD+R N L++RD A+ E+ VA DL +V L ++ + L +LG Sbjct: 290 VKAK-DLHVDERLNLLVMRDTPDAIRLAERIVAVQDLAEPEVMLEVEVLEVKRGRLLDLG 348 Query: 200 VKWTL---------ADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI---NGRLLDLE 247 +++ A + G G VT SV T + +I +DL Sbjct: 349 IQYPTNFSLLNLPPATSSTIGPGGVVTNTTPPPSVLTVESLKNITASQIAISPTPGVDLR 408 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGM 304 +Q ++I+A+PR+ + + A I G ++P S+ S + SV + + L + Sbjct: 409 ----KQDSDVNILANPRIRVKNREKAKIHIGDKVPVITSNTTSTGVVSESVSYLDVGLKL 464 Query: 305 EVTPTVLQKG--RIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALG 361 +V P+VL + +IR+ L +S V + ++ +G + I + T + +K GET L Sbjct: 465 DVEPSVLMREDVQIRVGLEVSNIV--REIRSGNGTLTYQIGTRNAGTTLRLKDGETQVLA 522 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G+ + +++S +P LGD+P G+LF E + E+V+ ITPR++ S+ Sbjct: 523 GLISDEDRSTASRIPGLGDLPLIGRLFSSQRDERNKTEIVLLITPRVLRSD 573 >UniRef50_B9K747 ComE protein n=6 Tax=Thermotogaceae RepID=B9K747_THENN Length = 1282 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 95/396 (23%), Positives = 179/396 (45%), Gaps = 47/396 (11%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG-LI 81 K+++ ++V + +++ A + ++++ S TV++ + + W++ L V ++ G L Sbjct: 923 KLSIRAENVSLYDLIKEAASEIGVSMMFVDSPSETVTMRVDGITWEKFLDLVSQNYGYLF 982 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 + G V+ ++ ++A+ R ++P I G Sbjct: 983 DLKNG----VYVVSRPKQDLAK------RYFYDIPHNFDQIKALIEFYG----------- 1021 Query: 142 AKGSMTVDKRTNRLLLRD-NKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL----- 195 G++ VD N +++ ++T L++ V + P QVE+SA IV +KSL Sbjct: 1022 --GTVYVDSLNNFMVVTGISETIKKELDRIVENLKKPTKQVEISAKIV---DKSLIDMVT 1076 Query: 196 RELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFN--IGRINGRLLDLELSALEQ 253 +E+G++ + G G + + T ++ F I I L L+ S + Sbjct: 1077 KEMGLQLS--------GTGVDLSSSGASISFSVTDYLDFEKVINEILNSPLSLQFSDQKS 1128 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQK 313 DI+ASPR++ + + A I G IPY + G V+F E + + +TP V Sbjct: 1129 NTLDDILASPRIVTTSGKEAKILIGDRIPYVTDTNGDGTPEVQFLETGIELSITPFVRSD 1188 Query: 314 GRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 I L L + + PG + + GE +E T + VK+ T+ +GG+ + Sbjct: 1189 DTIELDLFVKASEPGNYINEVPGE----RTREATTHLIVKNNSTIVIGGLIREVTNMSES 1244 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +P GD+P GQ FR + E+R+L++F+T R+V Sbjct: 1245 KLPFFGDLPVIGQFFRTKSESKEKRDLMIFVTVRVV 1280 >UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6E1_9BACT Length = 668 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 153/318 (48%), Gaps = 28/318 (8%) Query: 105 EAEQARAQANLPLENRSITLQYAD--AGELAKAGEKLLSAKGSMTV--DKRTNRLLLRDN 160 + + +A+ +P+ IT Y++ A + K G ++ SM V D TN ++++ Sbjct: 344 KVQHQKAETIVPI----ITQMYSEKMAAQPKKLGRDIVE---SMKVLADTETNSVIMKTF 396 Query: 161 KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ-HAGGVGQVTTL 219 + +++ + +D QV + IV + + G +W + + GVG Sbjct: 397 PSDYKSIKAIIEAIDATPQQVFIEVLIVEVTRNDTLDYGTEWLWSGSNLQVYGVG----- 451 Query: 220 GSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 D++ A V F G ++ + L I+++P +L QPASI+ G Sbjct: 452 --DIARAAGNAAVQFTNTFAKGSF-EILIDILATSSNAKILSAPHILVRDEQPASIQVGE 508 Query: 280 EIPYQVSSGESGATS-----VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 E+P SSG+ T+ V++++ + + VTP + + G I L+ ++Q V L Sbjct: 509 EVPILTSSGQQTGTTITFEQVQYRDTGIILTVTPHIAENGLITLE--VNQEVSNAKLTDT 566 Query: 335 DGE-VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGK 393 E ++++T + +KSG T+ LGGI +KN+ +PLLGDIP+ G LF+ Sbjct: 567 GVEKSPTFSTRQVQTSLVIKSGHTIGLGGIIEQKNEKEVKKIPLLGDIPYLGNLFKATSL 626 Query: 394 EDERRELVVFITPRLVSS 411 D+R EL++ ITP + ++ Sbjct: 627 IDKRTELIMLITPYIANN 644 Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 15/164 (9%) Query: 24 VTLMVDDVPVAQVLQA-LAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS----A 78 + L DD + V+Q L E +N V+ V G V+LH + +K+ L +++ S Sbjct: 97 IALNFDDAEIKDVVQVILGEILNVNYVLDKRVGGKVNLHASGEVYKEELISMLNSLLYVY 156 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQ-----YADAGELA 133 ++GN+ +V A AR+E +P ++ I +Q YAD +L+ Sbjct: 157 NFTILKDGNLYNVLPQAE-----ARRETSIIIHGDKIPEWSKDIIIQIVPLKYADPKKLS 211 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 ++ +S+ G++ + L++ DN + + L + D+P Sbjct: 212 STVKQFMSSIGNIVTHEDFPYLMIIDNASVMEKLLTIIKIFDVP 255 >UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gammaproteobacteria RepID=B4SL34_STRM5 Length = 793 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 28/301 (9%) Query: 135 AGEKLLSAKG-SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 AG S G S+ D TN LL+ + L + + Q+D QV + + IV +N+ Sbjct: 346 AGSTGFSQNGISVQADVATNTLLISAPEPVYRNLRRVIDQLDQRRAQVLVESLIVEVNQT 405 Query: 194 SLRELGVKWTLADAQHAGGVG-QVTTLGSDLSVATATT---------HVGFNIGRIN--- 240 ELGV+W L + + GG T GS L+ A TT +G G IN Sbjct: 406 DAAELGVQWMLGNGRTFGGTHFGGTNGGSGLNTAARTTLDVLPKDGLKIGVIDGTINLPG 465 Query: 241 -GRLLDLEL--SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGAT 293 G++L+++ +AL+ K +I+++P L+ + ASI G +P+ V+ G G+ Sbjct: 466 VGQILNMKALANALQSKGGANILSTPNLMTLDNEAASIMVGQTVPFVSGRYVTDGGGGSN 525 Query: 294 ----SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIET 348 ++ ++ L + V P + + G + KL I Q V Q A+ V + +K+ ++T Sbjct: 526 NPFQTIVREDVGLKLRVRPQISEGGTV--KLDIYQEVSSIDAQSANSTVGIITNKRALDT 583 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 V + G+ + LGG+ G+D+VP LG IP G LFR D ++ + L+VF+ P + Sbjct: 584 SVLLDDGQIMVLGGLLEDSVSHGRDAVPGLGKIPVLGALFRSDTRKRAKTNLMVFLRPHV 643 Query: 409 V 409 V Sbjct: 644 V 644 >UniRef50_Q5P7D0 General (Type II) secretion pathway (GSP) D protein n=3 Tax=Rhodocyclaceae RepID=Q5P7D0_AZOSE Length = 771 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 101/410 (24%), Positives = 187/410 (45%), Gaps = 36/410 (8%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDV--SGTVSLHLTDVPWKQALQTVVKSAG 79 + VTL D P+ V +AL+ LN V DV V+L + D ++ V+K Sbjct: 183 KPVTLQFRDAPLRVVFEALSHAAGLNFVFDRDVRVDTPVTLFVRD----SSVDEVIKLVA 238 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 + + E +L+ +S+ A+Q Q L RS L ADA + ++L Sbjct: 239 VTQQIERKVLNANSVLIYPATPAKQRDYQE-------LVTRSFYLANADAKQAQSLLKQL 291 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 + +K M +D++ N L+++D A+ E+ +A +D+ +V L ++ + LRELG Sbjct: 292 VKSK-DMFIDEKLNLLVIKDTPQAVRLAERLLASLDVAEPEVMLEVEVLEVARSKLRELG 350 Query: 200 VKW--------------TLADAQHAGGVGQVTTL-GSDLSVATAT-THVGFNIGRINGRL 243 + + AG V +V TL GS+++ G G + Sbjct: 351 LDFPDEIGYGLLRSQQQITQTQTAAGIVSEVVTLPGSEIAPGVVPRAQWGDLTGYVTNPA 410 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEA 300 L L L A + +++A+PR+ + + A I G ++P ++ + + SV + + Sbjct: 411 LTLRLRA--EDGDTNLLANPRIRVKNREKAKIHIGEKLPVFTTTSTANVGVSASVSYLDV 468 Query: 301 VLGMEVTPTVLQKGRIRLKLHIS-QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 L ++V P V + +K+ + N+ +V +D + + T + +++GET Sbjct: 469 GLKLDVEPAVTLDDEVAIKVALEVSNIVREVPGPSDSLAYQVGTRSATTVLRLRNGETQV 528 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 L G+ + + + +P LGD+P G+LF + + E+V+ ITPR+V Sbjct: 529 LAGLISDEERRSAQRLPGLGDLPLIGRLFSSERNNASKTEIVLLITPRIV 578 >UniRef50_B1Y6L5 Type II and III secretion system protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6L5_LEPCP Length = 596 Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 105/434 (24%), Positives = 191/434 (44%), Gaps = 75/434 (17%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDV--SGTVSLHLTDVPWKQALQTVVKSAG 79 +++TL + DVP+ L +LA L L+ DV +L LTD +AL+ ++ S Sbjct: 68 RRITLQLRDVPLGLALDSLAGSTGLRLIRDRDVRTDARSTLFLTDARVGEALEVLLLSQQ 127 Query: 80 LITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 L R +G ++ N A+Q L+ R+ L++ +A +A + Sbjct: 128 LAMRALDGRTALIYP-----NTPAKQRTYGE-------LQVRTFVLRHTEAATMATLLKS 175 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 L+ ++ S+ D R+N L+LRD L EQ +A D P G V + ++ +N + L L Sbjct: 176 LVKSQ-SIVTDPRSNTLVLRDTPEVLQLAEQLIAINDRPSGDVVIEVQLIEVNRQRLSRL 234 Query: 199 GVKW----TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQK 254 G+ W ++A A +G + LG D +A+ +G N+ +L D+ + Sbjct: 235 GLSWPTSLSIATPASATTLGALRALGGDAWLASPLA-LGLNL-----QLQDIGAT----- 283 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPYQVS---------------------------- 286 +IA+P + A H + A + G ++P + Sbjct: 284 ----VIANPSVRARHKEKARLLIGDKVPVMTTQLASMGGSGASAAAPATTAPVTAAEGQA 339 Query: 287 -----SGESG-------ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 +G++G + SV++ + +EV P V G + L + I + Q L Sbjct: 340 GQAEQAGQAGDGGTVMFSGSVQYIDVGFKLEVEPQVHADGDVDLDIDIELSQITQTLDTD 399 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 G + ++ +T + ++ GET LGG+ R+ ++ +P L +P G+LF + ++ Sbjct: 400 SGVAYQLGVRQAQTSMRLRDGETQWLGGLIRRQERAAMSGLPGLSQLPVIGRLFGLESQD 459 Query: 395 DERRELVVFITPRL 408 ELV+ +TPR+ Sbjct: 460 TADTELVLAVTPRI 473 >UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVJ8_SYNAS Length = 601 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 148/328 (45%), Gaps = 36/328 (10%) Query: 115 LPLENRS--------ITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSA 166 PL+N S I LQ + ++ G+ LS + DK TN L++ + + Sbjct: 243 YPLQNASAEDLAKVLINLQPKETAPGSEKGQPALSRNVQIQSDKATNSLIITASAEDYAL 302 Query: 167 LEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDL--- 223 L+ + ++D V + A I+ +N LG +W +GG G + L Sbjct: 303 LQGLIQKLDSSRPMVYIEALILEVNIVKDFNLGTEWRAMHDAGSGGTGSLLFGSGGLGPP 362 Query: 224 --------SVATATTH----------VGFNIGRINGRLLDLELSALEQKQQLDIIASPRL 265 V T T+ G +G I + + + A++ + I++ P+L Sbjct: 363 AGTYNILPDVTTPATYSSGFTFGILGTGITLGGITFQDIGAMIQAIKSDTDIHILSKPQL 422 Query: 266 LASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLH 321 L + A I G +PY + ++ +S E+++ + +++TP + +G +R+K Sbjct: 423 LTMDNEEAQIHVGKNVPYATRKETTTTNLDYSSYEYRDVGVSLKITPHINSEGFVRMK-- 480 Query: 322 ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDI 381 I+Q V QV + + + +K+ + T V +K ET+ +GG+ + G VPLLGDI Sbjct: 481 INQEV-SQVTEDSPTGLPTTNKRAVNTTVTIKDSETVVIGGMIGDSTQLGTYKVPLLGDI 539 Query: 382 PWFGQLFRHDGKEDERRELVVFITPRLV 409 P G LF+ E+ L VFITPR++ Sbjct: 540 PVLGWLFKSRSSNREKTNLYVFITPRVI 567 >UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDL7_ACIJO Length = 785 Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 29/292 (9%) Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL 204 S+ D N L+++ + + +E + Q+D QV + A I+ + +LGV+W + Sbjct: 349 SIIADSSQNALVVKADPQLMREIESAIQQLDTRRQQVLIEATILEVEGNDADQLGVQWAM 408 Query: 205 ADAQHAGGVGQVTTLGSDLSVATATTHV-------------------GFNIGRINGR-LL 244 D G+ +GS L A + G R L Sbjct: 409 GDLSSGVGIINFDNIGSSLKSIAANYLTGGGAGAASAIGAGGSLILGDYKEGSDGSRQLY 468 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY---QVSSGESGA----TSVEF 297 + AL+ + +++++P ++ + A I G +P+ VS+ SG T++E Sbjct: 469 GAMIQALKSNTKSNLLSTPSIVTMDNEEAYIVVGENVPFVTGSVSTTSSGTANPYTTIER 528 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 K+ + ++V P + + G IRL+ I Q V + + L K+ I+T V + G T Sbjct: 529 KDVGVTLKVVPHIGEGGTIRLE--IEQEVSDVKANKGQAQDLVTSKRAIKTSVLAEHGNT 586 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + LGG+ + + S+P LG IP G+LFR DGK D++R L+VFI P +V Sbjct: 587 IVLGGLISDNTSYSRQSIPGLGAIPGLGRLFRSDGKSDQKRNLLVFIHPTIV 638 >UniRef50_D0X4T6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X4T6_VIBHA Length = 715 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 33/282 (11%) Query: 143 KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW 202 K S+ VD+R N L+ R + T AL +AQ+D+ QV L I + + GV+W Sbjct: 434 KLSLVVDERANTLIFRSSSTEYQALLPLIAQLDVMPKQVILEMTIAEVTMTDEFKFGVEW 493 Query: 203 TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLD-------LELSALEQKQ 255 ++ + A+T F + ++ G + + L A E Sbjct: 494 AFSNGNFS-----------------ASTKDAFGLDKVGGGFIKWMSGDDFINLQAFESNN 536 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPY---QVSSGESGAT-SVEFKEAVLGMEVTPTVL 311 ++I++ P LL A+I G++IP + +G T SVE+++ + + VTPT+ Sbjct: 537 NVNIMSKPSLLVRDGVEANINVGTDIPVVGQTTTDSNNGVTRSVEYRKTGVKVAVTPTIN 596 Query: 312 QKGRIRLKLHISQNVPGQVL--QQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 +G + + ISQ QV +G D+ I T+V +SG+T+ LGG+ + Sbjct: 597 AQGIV--SMVISQENSNQVDGGTSVEGNPSIFDRS-ITTEVVAESGQTVILGGLISENVT 653 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + +VP LG +P G LF + ELV+ +TPR+V S Sbjct: 654 NNGSAVPFLGSLPVVGGLFGTKTDNKTKTELVIMVTPRIVES 695 >UniRef50_D1B5I4 Type II and III secretion system protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5I4_THEAS Length = 589 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 92/405 (22%), Positives = 180/405 (44%), Gaps = 35/405 (8%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDV-SGTVSLHLTDVPWKQALQTVVKSAGLIT 82 V L + +V + V + L + N++ P V + V+L + VP K+ ++++ + Sbjct: 185 VDLALREVELKDVFRMLGDFSGYNIICDPTVPTSPVTLTVRKVPMKEVFSYLMRTYDITY 244 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA 142 G + + + +++A+ ++ + ++ + Y D +++ + L Sbjct: 245 AVMGRTI----LVGKADSLAKSLGQE---------KTKAFEISYGDVKQISAQVQTLFEI 291 Query: 143 KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV-- 200 + VD+R + + L+A+E+++ D P QV L A IV + + +REL Sbjct: 292 TRPIAVDERLRVMYVTGRPEQLAAVERFLNAADHPGKQVMLQARIVEVKDDGVRELESVV 351 Query: 201 -----KWTLADAQHAGGVG-----QVTTLGSDLSVATATTHVGFN-IGRING-RLLDLEL 248 W L+ + G +G Q + +D + T + I G LLD + Sbjct: 352 NTVYRYWWLSFSSKGGVLGYSRINQESVYKNDTNRVTKPGATDISAIAESGGLSLLDAGI 411 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTP 308 ALE + +ASP ++ + A I I Y + ++G + ++ ME P Sbjct: 412 KALENADKGKTLASPSVVVVDGKEAKISLTENIKYISARDQAGNPTYSEEKVGPTMEFLP 471 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQQADG----EVLAIDKQEIETQVEVKSGETLALGGIF 364 TV + G + +K+ + G+V + G EV +E+ + V V+ GE +GG+F Sbjct: 472 TVGRDGFVTIKMTLKT---GEVTKYIKGGLGEEVPQTSTREVTSYVRVRDGEPFVVGGLF 528 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 N + +P+L DIP G+LF+ K+ ER E+ + + P ++ Sbjct: 529 RDSNTFSEYRIPVLSDIPLIGELFKSRTKKKERGEVAMIVIPHIL 573 >UniRef50_Q2SVR9 Type II/III secretion system protein n=36 Tax=Burkholderia RepID=Q2SVR9_BURTA Length = 492 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 45/380 (11%) Query: 48 LVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAE 107 V PDV+ +H VP QA+ + K AG T + ++ + I R E Sbjct: 90 FVADPDVA---DVH---VPTPQAVFVLGKKAGTTT--------LFALGANDRTILR---E 132 Query: 108 QARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN-----KT 162 + P R + ++ L AG A GS+ V R D K Sbjct: 133 TVVVNVDTPSLQRILDARFPQL-HLTLAG-----APGSLMVSGRVPSAADADAVVQTLKP 186 Query: 163 ALSALEQWVAQMDL--PVGQVELSAHIVTINEKSLRELGVKWTL--ADAQHAGGVGQVTT 218 L E V ++ L P+ QV L I ++ ++LG+ W+ A GG+ T Sbjct: 187 YLRQQESLVNRLTLARPI-QVHLRVRITEVDRNITQQLGINWSALGASGNFVGGLFNGRT 245 Query: 219 L------GSDLSVATATTHVG-FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQ 271 L DLS + A + VG F+ + +D L AL+Q+ + ++A P L A Q Sbjct: 246 LFDTASKAFDLSPSGAFSVVGGFHTSHYS---IDGVLDALDQEGLITMLAEPNLTAISGQ 302 Query: 272 PASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLH--ISQNVPGQ 329 AS G E P V+ +GA +++FK + ++ TPTVL RI LK+ +S+ P Sbjct: 303 TASFLAGGEFPIPVAQDTTGAITIQFKPYGVSLDFTPTVLADNRISLKVRPEVSEIDPTN 362 Query: 330 VLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFR 389 + +V A+ + ++T VE+ SG++ A+GG+ K+ +P L +P G+LF Sbjct: 363 SVTTGSIKVPALTVRRVDTTVELSSGQSFAIGGLLQSKSSDVLAELPGLARLPVLGKLFS 422 Query: 390 HDGKEDERRELVVFITPRLV 409 +++ E+VV +TP +V Sbjct: 423 SRNYLNDKTEVVVIVTPYIV 442 >UniRef50_UPI0001745622 probable general secretion pathway protein D n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745622 Length = 888 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 103/192 (53%), Gaps = 14/192 (7%) Query: 233 GFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY------QVS 286 GFNI G+ LD+ +SALE +++ P + A + + A I G IP S Sbjct: 642 GFNIYGQLGQSLDVFVSALETTNNFKVLSRPSVFALNNKRAVITSGQSIPVPESSLANAS 701 Query: 287 SGESGA----TSVEFKEAVLGMEVTPTVLQKGRIRLKL-HISQNVPG-QVLQQADGEVLA 340 S +G T++ +K+ VL +EV P + G + L++ ++ V G Q++ Q V Sbjct: 702 SNNNGTGNVTTTITYKDVVLKLEVIPLINPDGDVTLRVAQVNDTVVGNQIVAQ--NNVPI 759 Query: 341 IDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERREL 400 I ++I T V V +G T+ LGG+ T +K + +P+L IP G+LFR D ER+EL Sbjct: 760 IGTEQIATTVTVPTGNTVVLGGLITETDKKDTEGIPVLSRIPGLGRLFREDVTSKERKEL 819 Query: 401 VVFITPRLVSSE 412 V+FI P +V+ + Sbjct: 820 VIFIQPMVVNDD 831 >UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0C8_9DELT Length = 690 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 85/284 (29%), Positives = 130/284 (45%), Gaps = 29/284 (10%) Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 D TN L++ L L+ + Q+D+ Q+ + A I I+ +LG++W ADA Sbjct: 328 DANTNALIMTGPPAVLQNLQTVIRQLDIRRAQLMIEAVIAEISTARAVDLGIQWFSADAD 387 Query: 209 HAGGVGQVTTLGSDLS---------VATATTHVGFNIGRING--RLLDLEL-------SA 250 G G+ +S +A GFN+G +G +L E +A Sbjct: 388 KVIGGTNFPGSGASMSGIAAGDEGSIAALAGLGGFNMGVFSGSTEILGREFFSFGALVNA 447 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT--------SVEFKEAVL 302 L + +I+++P L+ Q A I G +P+ S GAT +VE ++ + Sbjct: 448 LARDGDTNILSTPSLVTMDNQEAEIIVGQNVPFLTGSFTEGATGVGGSPFQTVERRDVGI 507 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 + V P V + IRL+ I Q V V + L + + I T V V+ G+ L LGG Sbjct: 508 KLRVKPQVTEGDVIRLQ--IEQEV-SSVERDDLAAGLVTNTRNINTSVLVEDGKVLVLGG 564 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 + + + VPLLGDIP FG LFRH E +R L+VF+ P Sbjct: 565 LISDDVQETVSKVPLLGDIPLFGALFRHTRSERSKRNLMVFLRP 608 >UniRef50_C0AE82 Type II secretory pathway component PulD-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AE82_9BACT Length = 693 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 117/454 (25%), Positives = 201/454 (44%), Gaps = 61/454 (13%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS---GTVSLHLTDVPWKQAL 71 G++A + VTL VDDV + ++ L + +N V ++ +S+++ DVP L Sbjct: 190 GMEAILQKTVTLQVDDVTLESIIFTLGKATGVNFVADRGLAQFQKKISVNMKDVPLTDLL 249 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNN--------NIARQEAEQARAQANLPLENR--- 120 V + L N++ + + N ++R A+ A+ E R Sbjct: 250 SYVSRQMELHFEVGENLVWIVDAKNKKNLFEETRFYRLSRGFIMPAQFGASEVKETRVKD 309 Query: 121 ----SITL-----QYADAGELAKAG-----EKLLSAKGSMTVDKRTNRLLLRDNKTALSA 166 +IT Q+ G + G +K + M +D N ++ + L Sbjct: 310 KDKETITTNQTVEQFVRDGAPQETGIEQAIKKFFTGSTYM-IDYERNIIVATGTRDQLRT 368 Query: 167 LEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW-TLADAQHAGGVGQVTTLGSDLSV 225 LE + + D PV QV + A +TI+E + ++LG+ W T A T++ + + Sbjct: 369 LENIIREFDRPVQQVLIEARFITISEAAFQQLGLNWETNRPTTSARSATDYTSIATTVGF 428 Query: 226 ATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEI---- 281 T G I N L L+A+EQ + +++PRL + +PA+I+ G Sbjct: 429 GLEKTFTG--IFGSNSDSLTATLTAIEQSGESQTLSAPRLTVINNRPATIRDGKTQYYYE 486 Query: 282 PYQVSSG--ESGATSVEFKE-------AVLGMEVTPTVLQKGR---IRLKLHISQNV--- 326 YQVS E+ +TS A + ++V ++ GR + LK +SQ+V Sbjct: 487 EYQVSQTILENRSTSSLVPSGKPTKLSAGVSLDVLASIGGDGRSIMLALKPSVSQDVELV 546 Query: 327 ----------PGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP 376 G+V+ D ++ QEI T+V V+SGET+ +GG+ + +SVP Sbjct: 547 TFATVSDLDSSGRVVSTFDIKLPQSRDQEISTRVIVQSGETVVMGGVIENVQSTFTESVP 606 Query: 377 LLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +LG IP+ G LFR + + R L++F+T L+S Sbjct: 607 VLGAIPYLGALFRTKTEVSKPRYLLIFVTATLLS 640 >UniRef50_Q7UGK0 Putative outer membrane channel for pilus assembly CpaC n=1 Tax=Rhodopirellula baltica RepID=Q7UGK0_RHOBA Length = 589 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 23/247 (9%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHA--GGVGQVTTLGSDL--------SVATAT 229 QV L I+ ++ LRELGV + D G V +G+ + + Sbjct: 191 QVLLHTKIMEVSRTKLRELGVDLAILDDNFTLLNGPSGVLDVGAGIVEGDAGFGPIPLGD 250 Query: 230 THVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 T++ FN+ NG L ++AL +++ ++A P ++A+H +PA G IP + G+ Sbjct: 251 TNLRFNV---NGNFETL-INALHEQRLTKLLAEPTVVATHGRPARFTVGGRIP-TIVPGQ 305 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLH--ISQNVPGQVLQQADGEVLAIDKQEIE 347 +G + +++ ++ P V+ GRIRL++ +S+ P + + V A + +E Sbjct: 306 NGQVQITYEDYGTSIDFLPFVVGPGRIRLEVRPEVSEPDPSRAVTVNGTNVTAFTTRYVE 365 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR---ELVVFI 404 T VE+++G+T AL G+ + +S P G +P+ G LFR K ERR EL++ + Sbjct: 366 TAVEMQAGQTFALAGLLQSRTESTTSRTPFFGSLPYVGTLFR---KMQERRNEIELLILV 422 Query: 405 TPRLVSS 411 TP LV + Sbjct: 423 TPELVEA 429 >UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AIN8_CITK8 Length = 640 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 85/316 (26%), Positives = 145/316 (45%), Gaps = 42/316 (13%) Query: 120 RSITLQYADAGE----LAKAGEKLLSAKGS-------------MTVDKRTNRLLLRDNKT 162 R L+YA+A + L GE++ G+ +T D+ TN L++ Sbjct: 266 RVFYLKYANAAKVVPVLTGIGEQMKDKPGAAKSKSPVAATDLNITADESTNSLVITAQPN 325 Query: 163 ALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG--------GVG 214 +++LE+ + ++D+ QV + A I + + + +LGV+WT ++H G +G Sbjct: 326 VMNSLEKVIDKLDIRRPQVLVEAIIAEVQDGAGTDLGVQWT---SKHGGVQFGATGLPIG 382 Query: 215 QVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 QV G G NG L ++AL + DI+++P ++ + AS Sbjct: 383 QVKN-----GTIKGVNFTGMATGFFNGDFGAL-MTALSTNGKNDILSTPSVVTLDNKEAS 436 Query: 275 IKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV 330 G ++P Q ++G++ +VE K +++ P + I +K I Q V Sbjct: 437 FNVGQDVPVLSGSQTTTGDNVFNTVERKTVGTKLKILPQINDGDMIHMK--IEQEVSSVD 494 Query: 331 LQQADGEVLA--IDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLF 388 + L + + I +V V SG+T+ LGG+ K VPLLGDIP GQLF Sbjct: 495 ASSTEDSSLGPTFNTRTINNEVMVHSGQTVVLGGLIENVTKQNVSKVPLLGDIPLVGQLF 554 Query: 389 RHDGKEDERRELVVFI 404 R+ ++ +R L+VFI Sbjct: 555 RYTSQDTTKRNLMVFI 570 >UniRef50_A3ZUT9 Type IV pilin multimeric outer membrane protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUT9_9PLAN Length = 719 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 111/411 (27%), Positives = 192/411 (46%), Gaps = 38/411 (9%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 +T+++ D + +VL+ L+EQ LN++ + V GTVS L+ V + AL +++S G IT Sbjct: 175 LTIVIQDTDIREVLEMLSEQGNLNILPTNSVRGTVSASLSKVDVQTALNAILRSTGYITL 234 Query: 84 QEGNILSVHSIAWQN--NNIARQEAEQARAQANLPLENRSI-TLQYADAGELAKAGEKLL 140 +E N + V + A + NN+ A++ + + P R++ A+ G + Sbjct: 235 EENNFIYVGTPAELHAMNNM----ADRVQTRIYRPNYVRAVDLQTLLTPLLTAEVGVISV 290 Query: 141 SAKGSMTVDKRTN-----------RLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 S+ + + +N +++RD + L+ +++ V ++D QV + A I++ Sbjct: 291 SSASQVGISADSNAAGGDDFAGTEAVIVRDFEHKLNEIDEAVRELDRRPLQVAIEATILS 350 Query: 190 INEKSLRELGVKW-TLADAQHAGGVGQVTTLGSDLSV--ATATTHVGFNIGRINGRLLDL 246 + LGV + L D V G LS T G G ++ L + Sbjct: 351 VKLDDSLNLGVNFEALIDKNKVRLVS-----GFPLSALDQIKLTDGGLKFGFLDSS-LGV 404 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY-QVSSGESGAT-SVEFKEAVLGM 304 + ALE +IASP+LL + Q A I G + Y + E+ +T SVEF E + Sbjct: 405 FIDALESFGDTSVIASPQLLVLNKQRAEILIGEQKGYISTTVTETASTQSVEFLEIGTQL 464 Query: 305 EVTPTVLQKGRIRLKLH--ISQNVPGQVLQQADGEVLAIDK--QEIETQVEVKSGETLAL 360 + P + G +RL++H IS G V + +G+ +K ++ T V G T+ + Sbjct: 465 RLRPFITDDGMVRLEVHPEISD---GDV--KVEGQFTLPNKIVTQVTTNVICPDGRTIII 519 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 GG+ + +P LG IP G FR + R EL+V +TPR+V + Sbjct: 520 GGLIKSDLRKKGSQIPYLGSIPILGPAFRQKQETTVRDELIVLLTPRIVDA 570 >UniRef50_C6CGU4 Type III secretion outer membrane pore, YscC/HrcC family n=19 Tax=Gammaproteobacteria RepID=C6CGU4_DICZE Length = 691 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 81/288 (28%), Positives = 135/288 (46%), Gaps = 22/288 (7%) Query: 128 DAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 ++G + A K G ++ D R N LL+RD++ +Q + ++D+P V + A I Sbjct: 272 NSGGASSASRKKDQLNGKVSADVRNNALLVRDDEKRRDEYQQLIDKIDVPQNLVNIDAII 331 Query: 188 VTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE 247 + ++ +L L W G +G VT G+++ ++T V + + + Sbjct: 332 LDVDRTALSRLEANWQ-------GKLGAVTG-GANMMSGSSTLFVS------DFKRFSAD 377 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 + ALE + I+A+P +L QPA I S + ++GE A +V+ A ++VT Sbjct: 378 IQALEGEGTASIVANPSVLTLENQPAVIDF-SRTAFITATGERVA-NVQPVTAGTSLQVT 435 Query: 308 PTVLQKG---RIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 P V+ G I+L + I GQV +G + + + TQ + L LGG Sbjct: 436 PRVVGHGGSSSIQLVIDIED---GQVETNTEGTASGVKRGTVSTQALIGENRALVLGGFH 492 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 ++ VPLLGDIPW G+LF E RRE + +TP L+ + Sbjct: 493 VEESGDRDKRVPLLGDIPWIGKLFTSRQHEVSRRERLFILTPHLIGDQ 540 >UniRef50_Q1LH50 Type II and III secretion system protein n=19 Tax=Burkholderiaceae RepID=Q1LH50_RALME Length = 473 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 23/256 (8%) Query: 171 VAQMDLPV-GQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATAT 229 V + +PV G V++ +V I++ L+E+G+ + + GG T S L+ AT T Sbjct: 180 VDRSTVPVSGTVQVDVKVVEISKTVLKEIGLNFY----RDNGGFAFGTFSPSSLTKATFT 235 Query: 230 THVG------------FNI--GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 VG FN+ G ++ + LS +E + ++A P L+A Q AS Sbjct: 236 PGVGTVVDSVSPISSAFNLIAGSVSKGIF-ANLSLMEANGLVRVLAEPSLVALSGQSASF 294 Query: 276 KQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKL--HISQNVPGQVLQQ 333 G EIP V G T++++K +G+ V+PTV+ + RI LK+ S P + + Sbjct: 295 LAGGEIPIPVPQAL-GTTTIQYKPFGIGLTVSPTVMSRERIALKVAPEASDLDPSRGIVL 353 Query: 334 ADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGK 393 V AI + +T +E+ GE+ +GG+ +R S VP LGD+P G F++ Sbjct: 354 NGATVPAIVTRRADTTIELGDGESFVIGGLVSRNTVSNVSKVPFLGDLPVIGSFFKNLNF 413 Query: 394 EDERRELVVFITPRLV 409 E REL++ +TP L+ Sbjct: 414 HQEDRELMIVVTPHLI 429 >UniRef50_C9M548 Putative bacterial type II/III secretion system short domain protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M548_9BACT Length = 531 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 96/394 (24%), Positives = 183/394 (46%), Gaps = 40/394 (10%) Query: 14 PGVQAAKP-----QKVTLMVDDVPVAQVLQALAEQEKLNLVVS-PDVSGTVSLHLTDVPW 67 P AKP +++T+ + +V VA L+ AE K +++V P+ S TV+L L DV Sbjct: 135 PSAGCAKPAGQKEKRLTMSLTEVKVADALRLAAEGLKCSIIVDEPETSPTVTLSLRDVTA 194 Query: 68 KQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYA 127 ++AL+ + SAG + G+ + V + AR N +S + +A Sbjct: 195 QEALELITASAGYGWAKIGSTILVGP----------RSVLAARLGKN---GLKSYDVFWA 241 Query: 128 DAGELAKAGEKLLSAKG--SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 D G+ + ++ G +++VD+R NR+ ++ + + +AQ+D P QV + A Sbjct: 242 DPGKTGALVKSIVGLVGDDAVSVDERRNRIYVKGTPAQQEQVRELLAQLDEPADQVMIKA 301 Query: 186 HIVTINEKSLRELGV-------KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGR 238 I+ +N+ + E+ +W L+ + +G + S L+ ++ T + R Sbjct: 302 RIIEVNDDATSEMESVLQAVYHQWWLSFSSGVASLGFFDS-SSPLAPSSGTAQGAGTVAR 360 Query: 239 INGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFK 298 +LD ++ L +K + ++A P ++ A+IK + Y ++G + Sbjct: 361 ----MLDARIAGLVEKGKARVLADPTVVVLDGHKATIKLVDRVKYVSWRDDAGNPGYSDE 416 Query: 299 EAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG----EVLAIDKQEIETQVEVKS 354 E +EVTP V +G + + + + G+++Q G +V I ++E+ + V V Sbjct: 417 EVGPRLEVTPRVGSEGGMTISMALKT---GEIVQWKRGGLGEDVPQISEREVSSSVRVLD 473 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLF 388 G+ +GG+F +P+LGD+P G LF Sbjct: 474 GQPFVVGGLFKESVSKTTQRIPVLGDLPLLGSLF 507 >UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Comamonadaceae RepID=A1TKM7_ACIAC Length = 810 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 83/311 (26%), Positives = 138/311 (44%), Gaps = 48/311 (15%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S G + D TN L++ + L + Q+D QV + + IV + + + G+ Sbjct: 406 STGGQIQADPSTNSLIISAPEPQFRQLRAVIDQLDGRRAQVLVESLIVEVAANKVADFGI 465 Query: 201 KWTLADAQHAGGV-------------------------GQVTTLGSDLSVATATTHVGFN 235 +W + G G V+ + S LS + A G N Sbjct: 466 QWQGVMGNYGNGTIGVIGTNSTASGGANILNLALAAASGSVSGVTSALSASGARPGNGLN 525 Query: 236 IG---RINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP-----YQVS 286 + RING L + LE +++++P LL + A I G+ +P Y S Sbjct: 526 VAIAPRINGNYYLGALANFLENTGDANVLSTPNLLTLDNEEAQIIIGNNVPFVTGSYANS 585 Query: 287 SGESGA---TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID- 342 +G S T+VE K+ L + V P + + G ++L L+ +V Q DG A++ Sbjct: 586 TGSSTVNPFTTVERKDVGLMLRVRPQISENGTVKLSLY------QEVSQVNDGTANAVNG 639 Query: 343 ----KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR 398 K+ IE+ V V G + LGG+ + GQD VPL+GD+P G LFR++ + ++ Sbjct: 640 PTTSKRSIESTVLVNDGSVIVLGGLLEDRYSMGQDKVPLMGDLPVVGGLFRNENRRRQKT 699 Query: 399 ELVVFITPRLV 409 L+VF+ P ++ Sbjct: 700 NLMVFLRPVVI 710 >UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLP8_9BURK Length = 807 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 84/309 (27%), Positives = 147/309 (47%), Gaps = 32/309 (10%) Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 A +G L+ G + D TN L++ + L + ++D+ QV + + IV ++ Sbjct: 388 AASGNVDLNNGGIVQADPSTNSLIITAPEPIYRNLRSIIEKLDVRRAQVFVESLIVEVST 447 Query: 193 KSLRELGVKW-----TLADAQHAGGVGQVTTLGSDLSVATATTHVG-----FNIGRINGR 242 E G+++ AD G GS ++ A T++G NIG I+G+ Sbjct: 448 DKAAEFGIQFQGLSGVGADGVRVIGGTNFNDPGSGSNILGAATNLGSVGRGLNIGVIDGQ 507 Query: 243 L----------LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSG 288 + L ALE K +I+++P +L + A I G +P+ +SG Sbjct: 508 VNIPGIGTISNLGFLARALESKANANILSTPNILTLDNEEAKIVIGQNVPFITGQFTNSG 567 Query: 289 ESGAT-----SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 +GAT ++E ++ L + V P V + G + KL I Q V V+ + + +K Sbjct: 568 GNGATVNPFQTIERQDVGLTLRVKPQVSEGGIV--KLGIFQEV-SSVVDSTNVSGIITNK 624 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 + IE+ V V++G + LGG+ + ++ VP LGD+P GQ FR+D + ++ L+VF Sbjct: 625 RSIESNVLVETGNIIVLGGLVEDRVTGNEEKVPGLGDVPVLGQFFRYDNRRRQKTNLMVF 684 Query: 404 ITPRLVSSE 412 + P +V +E Sbjct: 685 LRPVVVRNE 693 >UniRef50_A8UQX4 General secretion pathway protein D n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UQX4_9AQUI Length = 663 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 37/301 (12%) Query: 139 LLSAKGSMTV--DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 ++ K M + D+ TN ++L K+ + ++ +D+ QV ++A IV + KSL Sbjct: 332 FITTKEGMKIGFDRGTNSVILYATKSEYEGIRSLISGLDVRRKQVLIAATIVEASTKSLL 391 Query: 197 ELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVG-FNIGRIN--GRL---------- 243 ++GV+W Q G G + G+ LS ++ G F +G + GR Sbjct: 392 DIGVRW-----QILGKRGGASFRGTSLSNIYSSFASGNFLMGVFSDVGRTVTVGDATFFF 446 Query: 244 --LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEF 297 L L S LE +II++PR+L QPA IK G +PY + + ++ Sbjct: 447 PDLVLLFSLLETGSGFNIISNPRVLTLDNQPAIIKVGQVVPYAEGVKFDINGQPIITYDY 506 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID-------KQEIETQV 350 KE L + VTP + L+L I N+ +++ E+ A +E+ + V Sbjct: 507 KEVGLELNVTPRISGD---NLRLTIGLNLE-EIIDFVTNEIGATSYTVPVTSNREVNSDV 562 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +++G+T+ LGG+ + K + VP L IP G+LFR D K+ ++ L +FITP +VS Sbjct: 563 VIENGQTVILGGLVSTKTLKTMEGVPGLWRIPILGRLFRRDVKQKDKTTLFIFITPYVVS 622 Query: 411 S 411 S Sbjct: 623 S 623 >UniRef50_C5CK05 Type II and III secretion system protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CK05_VARPS Length = 457 Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 64/178 (35%), Positives = 90/178 (50%), Gaps = 6/178 (3%) Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 FN G+ + L + LE ++A P L+A Q AS G E+P G G T Sbjct: 241 FNFGKAG---VGLNVGFLEGNGMARVLAEPTLVAMSGQSASFLAGGELPVPAPQGL-GTT 296 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKL--HISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 S+E+K +G+ +TPTVL RI LK+ S L V AI + +T VE Sbjct: 297 SIEYKPFGIGLTLTPTVLSNDRIVLKVAPEASDLDYTNSLSIGGVAVPAITTRRADTTVE 356 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + GE+ +GG+ +R S D VPLLGD+P G FR + + +ELV+ +TP LV Sbjct: 357 LGDGESFIIGGLVSRTTTSNVDKVPLLGDLPILGTFFRQNKYQMSEKELVILVTPHLV 414 >UniRef50_B4U6K2 General secretion pathway protein D n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6K2_HYDS0 Length = 660 Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 157/332 (47%), Gaps = 28/332 (8%) Query: 100 NIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRD 159 N+ + + Q+N+P N++I + ++ G LS + D+ TN ++L Sbjct: 310 NLNTMQNQPQTIQSNVP-PNQNINVISSNK----PIGSIYLSDGTRIGFDRATNSVILYA 364 Query: 160 NKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVG----- 214 K+ L+ + ++D QV ++A +V N GV W GG+G Sbjct: 365 TKSQYENLKNLIKKLDEKRIQVLIAASVVEANLTKQLTTGVNWQALGKN--GGIGFNPAS 422 Query: 215 -----QVTTLGSDLSVATATTHVGFNIGRINGRLLDLE--LSALEQKQQLDIIASPRLLA 267 Q G+ + T+++ + N+G DL LS LEQ II++P++L Sbjct: 423 LQTIYQGLLSGNFVVGVTSSSSISANVGGNTIIFPDLAVFLSLLEQGNGFKIISNPKVLT 482 Query: 268 SHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 + A IK+ PY Q + + ++K+ L ++V PTV K IRL ++++ Sbjct: 483 LDNEEAIIKEAQVYPYVTGTQYNINGFPILTYDYKDIGLELDVIPTV-SKDNIRLGINLN 541 Query: 324 -QNVPGQVLQQADGEVLAI---DKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLG 379 Q++ G G+ + I + + ++V VKSG+T+ LGG+ + +P+L Sbjct: 542 LQDITGFTNTNVAGQTVPIPITTDRVLNSEVVVKSGQTVILGGLVSNNTIKNISGIPILQ 601 Query: 380 DIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 DIP G LF++ +E+++ L +FITP ++ S Sbjct: 602 DIPVLGNLFKYQNRENKKSTLFIFITPYIIKS 633 >UniRef50_D2RKE8 Type II and III secretion system protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKE8_ACIFE Length = 590 Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 20/247 (8%) Query: 180 QVELSAHIVTINEKSLRELGVKW---TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI 236 QV L A I+ IN + ++LG+++ TL D T G+ + G N Sbjct: 184 QVRLVAQIIEINTSAEKDLGIQYWSPTLGDNTTGNSNSTDITRGT-----PGLFYAGENF 238 Query: 237 GRINGRL---------LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS 287 + G L+ L AL + I++ P + Q A I G IP S+ Sbjct: 239 YKQRGSFGWFGSHLSNLNASLQALVTSGKARILSRPSITTMSGQKAKILIGGRIPIPTSA 298 Query: 288 GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLH--ISQNVPGQVLQQADGEVLAIDKQE 345 G+ G ++++++ + +++ P V +I K+H +S G +++ D + AI +E Sbjct: 299 GD-GQIAIDWRDYGVKLDIEPVVDADNKITSKVHAEVSTLDYGHSVKENDFSIPAIASRE 357 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 E + V+SG T+A+GG+ ++ +PLLGDIP GQ FRH + REL++ IT Sbjct: 358 AEAMINVRSGMTMAIGGLLNSEDSKSVSKIPLLGDIPIIGQFFRHTSTTRDNRELLILIT 417 Query: 406 PRLVSSE 412 P LV + Sbjct: 418 PLLVGDD 424 >UniRef50_C9NP33 Type III secretion system outer membrane pore YscC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NP33_9VIBR Length = 686 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 19/270 (7%) Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL 204 +++ D R+N +L+ D+ S ++ + ++D P VE+ A I+ I K L ++GV W Sbjct: 275 NVSADVRSNSVLIYDDLAKRSMYQRLIEKLDKPSRMVEIDAIILDIERKQLSQIGVNWGY 334 Query: 205 ADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPR 264 + +G + G V TAT + + GR EL ALE K + ++A+P Sbjct: 335 QKNDFS--LGSMMPQGG---VQTATLFI-----QDKGRFY-AELQALEMKGKATVLANPS 383 Query: 265 LLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKG---RIRLKLH 321 +L QPA I SE + + GE V A G++V P +L G I+L + Sbjct: 384 VLTMANQPAVI-DSSETAFIQTEGER-VVDVREVTAGTGLQVVPRILTGGGKTTIQLNVD 441 Query: 322 ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDI 381 I G + ++ D E ++++ I TQ V ++L GG +N VP+LGDI Sbjct: 442 IED---GNIFEEEDKETPSVNRSTISTQALVTPEQSLVFGGFNVSENTRSTSKVPVLGDI 498 Query: 382 PWFGQLFRHDGKEDERRELVVFITPRLVSS 411 P G LF+ + +R + +TPR++ S Sbjct: 499 PLLGSLFQVQKEARTKRVRLFILTPRILDS 528 >UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-like n=8 Tax=Pseudomonas syringae group RepID=Q4ZRP9_PSEU2 Length = 776 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 29/292 (9%) Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 L A +T K +N+LL+R +E + ++D P QV++ I+ + ++G Sbjct: 465 LDASTRITAQKSSNQLLVRTRPAQWKEIESAIKRLDNPPLQVQIETRILEVKLTGELDMG 524 Query: 200 VKWTLAD-AQHAGGVGQVT-TLGSDLSVAT-----ATTHVGFNIGRINGRLLDLELSALE 252 V+W L A ++G G VT T GS ++ T A+T F N L + L ALE Sbjct: 525 VQWYLGRLAGNSGTTGNVTNTAGSQGAIGTGGAALASTDAFFYSFVSNN--LQVALRALE 582 Query: 253 QKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS------GESGATSVEFKEAVLGMEV 306 + ++++P L+ + Q A I+ G IP +S + +SVE+ + + ++V Sbjct: 583 TNGRTQVLSAPSLVVMNNQQAQIQVGDNIPISQTSINTNTNTGTTLSSVEYVQTGVILDV 642 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLA-------IDKQEIETQVEVKSGETLA 359 P + G + + + Q + AD I + + TQV +SG+T+ Sbjct: 643 VPRINPGGLVYMDIQ-------QQVSDADSSGTTDANGNPRISTRSVATQVAAQSGQTVL 695 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 LGG+ + N ++VP LG IP LF + K +R EL+V ITPR+++S Sbjct: 696 LGGLIKQDNAETVNAVPYLGRIPGLRWLFGNTSKSKDRTELIVLITPRVITS 747 >UniRef50_Q7NRG7 Probable type II secretion system protein n=1 Tax=Chromobacterium violaceum RepID=Q7NRG7_CHRVO Length = 708 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 39/299 (13%) Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 D +N L+L L + +D QV + A ++ + ++GV+W A Sbjct: 351 DSNSNALILNVPDPMYQNLRNVIDLLDKRRAQVYVEALVMEVTASRATKIGVQW--AANV 408 Query: 209 HA-----------------GGVGQVTTLGSDL-SVATATTHVGFNIGRING--------R 242 H GG G T G+ L S+ ++ T G IN Sbjct: 409 HGNGLIGNSLPSPSKPLVPGGSGASDTPGTALGSLVSSLTGGGLTAAIINTITVGGQQIP 468 Query: 243 LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS---GESGATSVEF-- 297 L L ALEQ+ Q +++ASP+L+ + A I G EI ++ G +G ++ + Sbjct: 469 TLGLLAQALEQEAQGNLVASPQLVTMDNEKAKIVIGQEIGVPTATYPAGTNGTSNAPYST 528 Query: 298 ---KEAVLGMEVTPTVLQKGRIRLKL-HISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 K G+E+TP + + G IR+K+ + ++ L A G +++ ++T V V Sbjct: 529 YDRKTVGFGLEITPQISEGGTIRMKISQAADSIDQTTLSAAAGPTF--NRRTLDTVVTVG 586 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G +ALGG+ + +D VPLLGDIP G LF++ GKE ++ L++FI P ++ E Sbjct: 587 DGGLVALGGLTQETTSNAEDKVPLLGDIPVIGNLFKYQGKERKKTNLMIFIRPTIIRDE 645 >UniRef50_B0VJ43 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ43_9BACT Length = 472 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 105/423 (24%), Positives = 190/423 (44%), Gaps = 56/423 (13%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT-------VSLHLTDVPWKQALQTVV 75 KVT DD ++ V +AL+ N+V++ D +GT V++++ DVP + A+ V Sbjct: 44 KVTFNADDATLSSVFKALSRLSNTNIVLAIDQAGTAEKEEKRVTININDVPIETAVSLVA 103 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 SAGL R G S + Q NI + E++ I L DA +++ A Sbjct: 104 SSAGLSYRVIG---SNTFLVGQKQNIMEEIGERSDI----------IFLNNLDAKKVSDA 150 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 L + G +T + N L++ N +E+ V +D Q+E+ ++ ++ Sbjct: 151 ---LQNTSGKITPLEGQNALMVYGNPETFKEIEKLVKSIDTQQQQIEIRVRLIEVHLNEA 207 Query: 196 RELGVKWT----LADAQHAGGVGQVTTLGSDLSVATATTHV------------------- 232 +++GV W+ L V Q T G + + AT ++ Sbjct: 208 KQIGVDWSKLNHLTTILAEDPVNQYGT-GLPYNYSDATGYLPHGDPTDFGVIPDEQYFQR 266 Query: 233 --GF-NIGRINGRL--LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS 287 GF +IG + +L D+ + L + ++ R+ A + + A++ G +P+ V+ Sbjct: 267 INGFHDIGHFSRQLTAFDVTIDWLLENNAAQLLTDTRVTALNGELATMHIGEVVPFVVTD 326 Query: 288 GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIE 347 E+ VE E + + VTP V + G I ++I+ V V + G + + + Sbjct: 327 KEN-QLQVERSETGIILNVTPKVNKDGNI--TMNINPEV-SSVTELVGGYIPRTKVRRVS 382 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 + V V + + +GG+ + +PLLGD+P G++F+H + E +L++ ITPR Sbjct: 383 SAVTVPNEHKIIVGGLLNSNITQKINKIPLLGDLPLIGKIFQHRYELVENTDLIIEITPR 442 Query: 408 LVS 410 LVS Sbjct: 443 LVS 445 >UniRef50_A9IKI2 Putative outer membrane protein n=4 Tax=Bordetella RepID=A9IKI2_BORPD Length = 458 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 15/241 (6%) Query: 181 VELSAHIVTINEKSLRELGVKWTLAD--AQHAGGVGQVTTLGSDLSVATATTHVGFNIGR 238 V L +V I LRE G++W HAGGV Q GS L +A A ++ Sbjct: 163 VLLDVQVVEIPSARLREFGLQWDALSQGGLHAGGVWQP---GSSLQLADAAQPPALSMQG 219 Query: 239 ING-------RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 + LL L+AL Q+ + ++A P+LLA AS G E+PY + + G Sbjct: 220 MGAAGYFGVNALLSARLAALAQRGEAVMLAQPQLLARSGTTASFLAGGEVPYSTTDAQ-G 278 Query: 292 ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 +S EFK + + +TP + + G IR ++ + + L A G A+ + T+ Sbjct: 279 NSSTEFKPYGVSLNITPRIDRNGAIRSRIEVEASSIDTSLSVAGGP--ALRTRRAVTEFN 336 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 V+SG+TL LGG +R+ + +P+L DIP G LF + + EL +F+TPR+VS Sbjct: 337 VRSGQTLVLGGFLSRERSHERSGLPVLQDIPLLGALFSSRRDQHKETELAIFVTPRIVSQ 396 Query: 412 E 412 + Sbjct: 397 D 397 >UniRef50_D0IVZ6 Type II and III secretion system protein n=2 Tax=Comamonas testosteroni RepID=D0IVZ6_COMTE Length = 454 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 94/180 (52%), Gaps = 15/180 (8%) Query: 232 VGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 +G NIG + G L ++A+P L+A Q A+ G E+P V +G +G Sbjct: 245 IGVNIGMLEGNNLA------------RVLAAPTLVALSGQSANFLSGGEVPVPVPAG-TG 291 Query: 292 ATSVEFKEAVLGMEVTPTVLQKGRIRLKL--HISQNVPGQVLQQADGEVLAIDKQEIETQ 349 ++++K +G+ V+PTVL RI LK+ S+ + V +I + +T Sbjct: 292 MVAIQYKPYGIGLTVSPTVLSNDRIVLKVAPEASELDYANTIVLNSATVPSITTRRADTT 351 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VE+ GE+ +GG+ +R SG D VPLLGDIP G LF+ + + EL + +TPRLV Sbjct: 352 VELGDGESFVIGGLVSRNTTSGTDKVPLLGDIPILGVLFKRQEFQQKESELAIVVTPRLV 411 >UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gammaproteobacteria RepID=Q31J27_THICR Length = 703 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 22/292 (7%) Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 +K L ++ S+ ++R N +++ +S L+ + Q+D+ QV + A +V + E Sbjct: 315 DKTLKSRISIEAEERMNAIIISAPPGVVSVLKTVIKQLDIRRAQVLIEAILVEVTETKQA 374 Query: 197 ELGVKWTLADAQHAGGV---GQVTTL----GSDLSVATAT-THVGFNIGRI--NGRLLDL 246 ELGV+W A G + G + T+ G+ + A A T V G + +G Sbjct: 375 ELGVEWGAAGPNGVGLINFSGTIPTIIGNAGNPAAQANAIGTGVNAAFGEVSADGTGWGA 434 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA---------TSVEF 297 + AL + +I+++P LL + A I G E+P+Q S S ++E Sbjct: 435 LIRALNSDSEANILSTPTLLTLDNEEAEIVVGKEVPFQTGSYTSTGTSSTPTNPFNTIER 494 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 K L ++VTP + + + L+ I+Q + V+ + D + K++I+T+V V G Sbjct: 495 KNVGLSLKVTPQINEGDEVFLE--INQEI-SDVIPKGDAVDVQTSKRQIKTRVIVGDGNV 551 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + LGG+ T K + VP LGDIP G LFR E E+ L+VF+ P +V Sbjct: 552 IVLGGLLTEKETEVEKKVPGLGDIPGLGALFRSTSNEREKVNLMVFLRPVIV 603 >UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH25_DESMR Length = 685 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 27/308 (8%) Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 G+ AKA +S + DK TN LL+ + ++Q V ++D P QV + A I+ Sbjct: 334 GDAAKAQAPTVSGGFNFVADKSTNSLLVTAAPEDFAFVDQVVKKLDAPRKQVYVEALIME 393 Query: 190 INEKSLRELGVKWTLADAQHAGGVGQVTTL---------------GSDLSVATATTHVG- 233 ++ GV +A+ Q G G+ L S V A +G Sbjct: 394 VSTDKSVSFGVNLNVANKQSGLGDGKYGGLLFASSNPAGYESLYNSSGAFVPPAGGSLGG 453 Query: 234 ----FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 IG + L ++A + +IIA+P+L+ + A+I PY S Sbjct: 454 LAFPVKIGEVIYSNLQAMINASKSDNSFNIIATPQLMTLDNEEATITVAENRPYLTSQDV 513 Query: 290 SGATS------VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 +T+ ++K+ ++VTP + + I+LK+ + + + + G + + Sbjct: 514 GQSTTDRPYQRFDYKDVGTTLKVTPQINEGDSIKLKVKQETSRIDETVTKETGALQPTTR 573 Query: 344 QEI-ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 402 + + ET + ++GET+ L G+ + G VP LGD+P G LF++ DER L V Sbjct: 574 KRVTETTIMCRNGETIVLSGLIGKSRAEGNSKVPGLGDVPVVGWLFKNKSVADERTNLYV 633 Query: 403 FITPRLVS 410 FITPR+ + Sbjct: 634 FITPRITA 641 >UniRef50_A4SKW4 S-protein secretion component D n=2 Tax=Gammaproteobacteria RepID=A4SKW4_AERS4 Length = 719 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 138/275 (50%), Gaps = 24/275 (8%) Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 + VD + N ++ L + + +D QV L A I + + LG +W + Sbjct: 430 VVVDAKRNAIIFSGRYGDYQRLIELLQFVDQRPRQVLLQAVIAEVKLTNDSSLGFEWNVN 489 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRL 265 GG + +L++A G + + +A + +++SPRL Sbjct: 490 KGDITGGTSGLIQQTGNLNLAGV-------FGDVTAKF-----AAALSEGNAKVLSSPRL 537 Query: 266 LASHLQPASIKQGSEIPY---QVSSGESG-----ATSVEFKEAVLGMEVTPTVLQKGRIR 317 + + ASIK G +I ++S+G SG TS ++ + L +E+TP++ G I Sbjct: 538 VVLDQETASIKIGDQIVVKTGEISNGSSGNDPQVTTSYKYIDTGLSLEITPSINDDGLI- 596 Query: 318 LKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 ++ ISQ + + G+ I+++ +++++ SG+T+ LGG+ ++ N + ++ VPL Sbjct: 597 -EMVISQEI--SSVSAGGGDTPPINRRAVQSKLLADSGKTVYLGGLLSQSNTNNEEKVPL 653 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 LGDIP G LF++ K+ E+ ELV+ ITP +++S+ Sbjct: 654 LGDIPLLGNLFKYQTKKIEKTELVLLITPYVITSK 688 >UniRef50_D1ULF2 Type II and III secretion system protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1ULF2_9BURK Length = 483 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 100/199 (50%), Gaps = 7/199 (3%) Query: 214 GQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPA 273 G T S +++A V FN +G DL L +E I+A P L+A Q A Sbjct: 248 GATPTFNSVAPISSAFNLV-FN-SATHGLFADLSL--MESNNLARILAEPTLVALSGQSA 303 Query: 274 SIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKL--HISQNVPGQVL 331 S G EIP + G G TS+E+K +G+ +TPTVL RI LK+ SQ + Sbjct: 304 SFLAGGEIPVPIPQGL-GTTSIEYKPYGVGLTLTPTVLSPQRIALKVAPEASQLDFANAV 362 Query: 332 QQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHD 391 + V AI + +T VE+ GE+ +GG+ R+ S VPLLGD+P G F+ Sbjct: 363 TISGVSVPAITTRRTDTTVELGDGESFVIGGLIDRETISNVAKVPLLGDLPVIGAFFKQL 422 Query: 392 GKEDERRELVVFITPRLVS 410 + +ELV+ +TP LVS Sbjct: 423 NYQQNDKELVIIVTPHLVS 441 >UniRef50_C4V5Y4 Fimbrial type IV assembly protein pilQ n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V5Y4_9FIRM Length = 428 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 111/443 (25%), Positives = 186/443 (41%), Gaps = 59/443 (13%) Query: 1 MKQWI-AALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS 59 MK+WI A LL L+ VT+ V V VL A A L L+V V+GTV+ Sbjct: 1 MKRWIITAALLGLLLSAAPVSAASVTVDVTGGDVRSVLLAAARMGNLPLIVDDSVTGTVT 60 Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN 119 HLT ++ L + + G+ + G++ W +A++ Sbjct: 61 AHLTGEA-EEVLHLIAAARGIHLERHGDV-------WLALGTEVHDAQR---------RV 103 Query: 120 RSITLQYADAGELAKAGEKLLSAKGS------------------------MTVDKRTNRL 155 + T++YAD ELA A L+ +G + VD TN L Sbjct: 104 HTYTVRYADPEELAHAANLSLTGEGKRAIVSKPNKDIGESGDQSSDVQRRVLVDTATNTL 163 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLAD-------AQ 208 L ++ A+ + V+ +D QV L A +V +++++ +ELGV W+ + + Sbjct: 164 LFYGTESEAFAVREIVSALDTAPRQVSLEARVVAVSKRAAKELGVDWSWSSLPQYPNVTR 223 Query: 209 HAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSA----LEQKQQLDIIASPR 264 + G V+ + + +A + F G G + SA L + + ++A P Sbjct: 224 DSAGNWHVSGRNAGTAGRSAPGVIRFGRGP-EGLPYEFYYSAAIRALITEGKAKMLARPN 282 Query: 265 LLASHLQPASIKQGSEIPY--QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHI 322 + + A I G+E+P +S T +E++EA + + TP V G I +H Sbjct: 283 VTTVQGREALINIGAEVPVPVVTTSNNVTTTGIEYREAGIILRYTPRVTADGNIVAHVHT 342 Query: 323 SQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIP 382 + P V D + K+ +T V +K+GET+ +GG+ +P LGD+P Sbjct: 343 EVSTPVFV---DDLKAYRFQKRSADTTVRLKNGETMVIGGLIDSDESRTLAKIPFLGDLP 399 Query: 383 WFGQLFRHDGKEDERRELVVFIT 405 G FR EL++F+T Sbjct: 400 LLGAFFRTVRTSKNESELMIFLT 422 >UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P591_9PROT Length = 690 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 156/348 (44%), Gaps = 54/348 (15%) Query: 113 ANLPLENRSITLQYADAGELAKAGEKLLSAK---------------------GSMTVDKR 151 AN P + L+ ADA +LA+ +LS + G + D Sbjct: 262 ANTPGNIHVVQLKNADATKLAQTLRSVLSGETAPPAAPSTVPQSAGVATSSTGMIQADPS 321 Query: 152 TNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW-TLADAQHA 210 +N L++ ++ + L + ++D+ Q+ + A IV + E GV+W L A + Sbjct: 322 SNALIVTASEPIYNNLRSVIDKLDVRRPQIFVEALIVEVTADKAAEFGVQWQNLVGASKS 381 Query: 211 GG--VGQVTTLGS--------DLSVATATTHVGFNIGRINGR--------LLDLEL--SA 250 G +G T GS D + +T + G NIG +NG +L+L + A Sbjct: 382 GAHIIGG-TNFGSVASGNNIIDAANNLSTVNQGLNIGIVNGTTTIPGVGTVLNLGMLARA 440 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPY---QVSSGESGATSVEF-----KEAVL 302 LE +I++ P L+ + A I G +P+ Q + S T+ F K+ L Sbjct: 441 LETDTNANILSEPNLMTLDNEEAKIVVGQNVPFITGQYAQTGSATTATPFQTIERKDVGL 500 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALG 361 +++ P ++Q G ++L+++ Q V + + L +K+ IE+ + V + + LG Sbjct: 501 TLKIKPQIMQGGTVKLQIY--QEVSSVLPSSSSSTSGLITNKRSIESNILVDDNQIVVLG 558 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+ Q PLLGDIP G LFR+D ++ + L+VFI P ++ Sbjct: 559 GLIQDSVNDVQSKTPLLGDIPILGSLFRYDTRQHTKTNLMVFIRPYIM 606 >UniRef50_A8FVV7 Flp pilus assembly protein, secretin CpaC n=6 Tax=Alteromonadales RepID=A8FVV7_SHESH Length = 483 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 10/239 (4%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGS-DLSVATATTHVGFNIGR 238 QV L I + ++ R+ K+ + + G +G G+ DL A A GF Sbjct: 181 QVMLEVVIAEVQKEVARQFDSKFFIFNKGDKGFIGTAGAGGTFDLDPAAAIDSRGFFARY 240 Query: 239 INGRLL-DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 ++G L+ + L +Q ++A P + A Q A G E P V G +G+T++++ Sbjct: 241 LDGNLMMNFALDVAKQHGLAKVLAEPNVTAMSGQSAEFLSGGEFPIPVP-GTNGSTTIQY 299 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHIS----QNVPGQVLQQADGEVL---AIDKQEIETQV 350 ++ +G++ P+VL G+I L L++ N L L +I K+ T V Sbjct: 300 RDFGVGVKFVPSVLDSGQINLNLNVMVSEVSNANSVTLSGGSNTALVVPSIVKRTTATTV 359 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 E+ G+T+A+ G+ + + D +P LGDIP GQLF + + ELV+ +TPRLV Sbjct: 360 ELADGQTIAISGLISDTLRENIDKLPGLGDIPILGQLFTSKSFQSGQSELVILVTPRLV 418 >UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C127_HYPNA Length = 653 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 112/431 (25%), Positives = 187/431 (43%), Gaps = 83/431 (19%) Query: 53 DVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNI---LSVHSIAWQNNNIARQEAEQA 109 D + T ++ LT+VP + + + G + Q+G LS + N+ I R +A Sbjct: 184 DQTVTETVPLTNVPAVEIETVLTRLQGDPSAQQGQAPSRLSAVASLTSNSIILRGDATSV 243 Query: 110 RAQANLPLE----------NRSITLQYADAGELAKAGEKLL-----------SAKGSMTV 148 + LE R ITL YADA E+ E++ +A + T+ Sbjct: 244 ERAKRVALELDATNPQRDHVRVITLNYADAEEVVPILERVANSMAMQRAPSETAPVAQTI 303 Query: 149 DKR--TNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLAD 206 TN L++ N + A+E+ V +D+ QV + A IV +++ + RELG+++ LA Sbjct: 304 AHHGPTNSLIISANPETILAMERVVTALDVRRPQVMVEAIIVEMSDDAARELGLQFLLA- 362 Query: 207 AQHAGGVGQVTTLGSDLSVA---------------------------------TATTHVG 233 G G V ++ S A T ++ + Sbjct: 363 ----GTGGDVPFASTNFSRAAPNLLALTGALVTDAFEDPAAENPFREAAISSLTGSSGLT 418 Query: 234 FNIGRING-RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS--GES 290 G +G L + L+A+E I+++P + + +++ G EIP GE+ Sbjct: 419 LGFGGTSGDNLFGVILNAVEDDTASRILSTPFGMTLNNATSALIVGQEIPVTTGQVLGEA 478 Query: 291 GAT---SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV------LAI 341 + +VE K+ + +EVTP + + +RL + Q + G V L + Sbjct: 479 NSNPFRTVERKDIGIQLEVTPRIGENDTVRLDIR-------QEVSSVFGSVGTVTPDLIL 531 Query: 342 DKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELV 401 DK+EI V GE + LGG+ + + VP+LGDIP G+LFR +GK RR L+ Sbjct: 532 DKREIRASVLADDGEIIVLGGLVEQTDTLRDTKVPVLGDIPGVGRLFRSEGKAATRRNLM 591 Query: 402 VFITPRLVSSE 412 VFI P +V ++ Sbjct: 592 VFIRPTIVRNK 602 >UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P193_AZOSE Length = 719 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 82/295 (27%), Positives = 137/295 (46%), Gaps = 35/295 (11%) Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 G + D N L++ + L + +D QV + A I I+ + E G++W Sbjct: 345 GMIQADPVNNALIIVAPEAIYRNLRHVIDLLDRRRAQVYIEALIAEISTERAAEFGIQWQ 404 Query: 204 LADAQHAG------------GVGQVTTLGSDLSVATATTHVGFNIG------RINGRL-- 243 A+ AG G GQ +G+ ++ + + F +G ING++ Sbjct: 405 SANTPGAGSSSTFFGGTNFGGAGQ-NIIGAAQNIGSVGKGMNFLLGGGTVKVPINGQMVE 463 Query: 244 -LDLELSA--LEQKQQLDIIASPRLLASHLQPASIKQGSEIPY---QVSSGESGAT---- 293 +L L A LE + +I+++P L+ + A I G +P+ Q ++ G T Sbjct: 464 VFNLSLLARFLETDSRTNILSTPSLVTLDNEGAKIVVGRNLPFITGQYTNTGGGTTPANP 523 Query: 294 --SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 ++E ++ L +EV P + + G IRL ++ Q V D +K+ I++ V Sbjct: 524 FQTIERRDVGLTLEVRPQISEGGAIRLDIY--QEASSVVPTLDDSAGPTTNKRSIQSTVL 581 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 V G +ALGG+ SG++ VPLLGDIP+ G LFR+D + + LVVF+ P Sbjct: 582 VDDGAIIALGGLVEDDYSSGEEKVPLLGDIPFAGSLFRYDTRRRTKTNLVVFLRP 636 >UniRef50_B8IDY5 Type II and III secretion system protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IDY5_METNO Length = 479 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 114/262 (43%), Gaps = 32/262 (12%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGF----- 234 QV L + I+ + R+LGV+W + AG G V L+ A +G Sbjct: 150 QVMLKVRFIEIDRTAGRDLGVRWEGTNRSVAGRSGTVAATPEALTTAPGGNGIGLLSNAI 209 Query: 235 --------------NIGRINGRLL-------DLELSALEQKQQLDIIASPRLLASHLQPA 273 G+ RL+ DL +SALE + +A P L+AS QPA Sbjct: 210 PAVAGAALSTVAAPQFGQFAARLINSNSAKVDLFISALETQGLARRLAEPNLVASSGQPA 269 Query: 274 SIKQGSE--IPYQVSSGESG--ATSVEFKEAVLGMEVTPTVLQKGRIRLKLH--ISQNVP 327 G E IP SSG G +V FKE + + TPTVL G I L+L +S+ P Sbjct: 270 EFLAGGEYPIPTASSSGALGVPTITVTFKEFGVRLTFTPTVLSNGLINLQLEPEVSEIDP 329 Query: 328 GQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQL 387 + V + K+ T +E++ G++ A+ G+ N+ + +P LG IP G L Sbjct: 330 AISVNTGLVTVPGLSKRRARTNIEMRDGQSFAIAGLLQAVNEKNLEQLPWLGSIPVLGAL 389 Query: 388 FRHDGKEDERRELVVFITPRLV 409 F ELVV +TP LV Sbjct: 390 FSSKEFRQRDTELVVIVTPHLV 411 >UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Proteobacteria RepID=A9IRR4_BORPD Length = 862 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 82/304 (26%), Positives = 148/304 (48%), Gaps = 32/304 (10%) Query: 135 AGEKLLSAKGSMTV--DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 AG+ + + G TV D TN L++ + +L + + Q+D QV + + IV +++ Sbjct: 372 AGDAVSYSGGGATVQADPSTNTLIISAPEPLYRSLREVIDQLDQRRAQVLVESLIVEVSQ 431 Query: 193 KSLRELGVKWTLADA--QHAGGVGQVTTLGSDL-SVATATTHV-----GFNIGRINGRL- 243 + E G++W +G +G GS + S T T + G +G + G + Sbjct: 432 EKAAEFGIQWMTGAGSLDGSGFIGGTNLGGSGIGSAGTGATTLDALGRGLTLGLVKGTVD 491 Query: 244 --------LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESG 291 L++ AL+ + +I+++P LL +PASI G +P+ V+SG +G Sbjct: 492 VLGNQVINLNVLARALQNSGEANILSTPNLLTLDNEPASILVGKTVPFVTGQYVTSGSAG 551 Query: 292 AT----SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV--LAIDKQE 345 + ++E ++ L + + P + + G + KL I Q V + + + E L +K+ Sbjct: 552 SNNPFQTIEREDIGLKLNIRPQISEGGAV--KLDIYQEV-SSIDEASSSETTGLVTNKRA 608 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 I+T V V G+ + LGG+ + S +VP L IP G LFR+D ++ + L+VF+ Sbjct: 609 IDTSVLVDDGQIIVLGGLLEDRVTSTTSAVPGLSSIPLLGALFRYDKRQRTKSNLMVFLR 668 Query: 406 PRLV 409 P +V Sbjct: 669 PFVV 672 >UniRef50_B9Z6A5 Type II and III secretion system protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6A5_9NEIS Length = 659 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 102/428 (23%), Positives = 188/428 (43%), Gaps = 52/428 (12%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLV----VSPDVSGTVSLHLTDVPWKQ 69 P +++A + +TL D + V + ++ +N V V PD+ T+ + + + + Sbjct: 165 PQLKSALSRPITLEFRDAALKAVFEVISRTSGINFVFDKDVRPDLKATIFVRNSTI--ED 222 Query: 70 ALQTVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 A+Q + L+T Q + +L+ ++I NN A+Q+ Q N L N A+ Sbjct: 223 AIQLL-----LVTNQLDRRVLNDNTIMVYPNNPAKQKDYQELVIKNFYLAN-------AE 270 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 A + A LL + DKR N +++RD A+ E+ +A DL + L +V Sbjct: 271 AKDTANLIRALLKTRDVFVDDKR-NLVVMRDTPEAVKVAERLIASQDLAEPEAILDVEVV 329 Query: 189 TINEKSLRELGVKW-----------------TLADAQHAGGVGQVTTLGSDLSVATATTH 231 +N L+ LG+ W G V V T G +VA+ + Sbjct: 330 EVNRARLQSLGIDWPSQVGYGLLTGGTSTQTGTVTNPTTGAVTPVVTPGVAATVASGVIN 389 Query: 232 VGFN----IGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS 287 + N I L L L A Q +++A+PR+ + + A I G ++P S+ Sbjct: 390 LRNNPLGLTTFIANPALVLHLQA--QDTDANVLANPRIRVKNHEKAKIHIGDKVPVFTST 447 Query: 288 G--ESG-ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD---GEVLAI 341 +G A SV + + + +EV P++ + + + + + +++Q D I Sbjct: 448 AVVNAGIAQSVSYLDVGVKLEVKPSIGLDDDVTIDVGLEVS---SIVKQVDFGTSTAYQI 504 Query: 342 DKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELV 401 + +T + ++ GET L G+ +++ +P LGD+P G+LF + + E+V Sbjct: 505 GSRAADTTLRLRDGETQVLAGLIQDEDRRSITKIPGLGDLPIVGRLFSSNNDSRSKSEIV 564 Query: 402 VFITPRLV 409 + ITP +V Sbjct: 565 LLITPHIV 572 >UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMF5_AGRRK Length = 714 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 33/285 (11%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S S+ D N LL+ + +EQ + Q+D+ QV + A I + + G+ Sbjct: 405 STHTSVVADVENNALLISTTQREYEHIEQILKQLDVMPTQVLIEAVIAEVTLNDQLKFGL 464 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSV-ATATTHVGF-------NIGRINGRLLDLELSALE 252 +W + + G+ SDLS +T + GF N+G L+AL Sbjct: 465 RWFFENGKFGVGL-------SDLSDGSTGASFPGFAWTFASSNVGAT--------LNALS 509 Query: 253 QKQQLDIIASPRLLASHLQPASIKQGSEIPY-------QVSSGESGATSVEFKEAVLGME 305 ++I+++P L+A + Q A+++ G ++P SS + +S++ K+ + + Sbjct: 510 SITNVNIVSAPTLMALNNQKATLQVGDQVPIVTQQSASTTSSNTAIVSSIDLKDTGVILT 569 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADG-EVLAIDKQEIETQVEVKSGETLALGGIF 364 V P V GR+ L I Q V V G + I ++++ T+V V E++ALGG+ Sbjct: 570 VLPRVNSSGRVML--DIQQEVSNVVKTTTSGIDSPTIQQRKLSTKVIVDDNESVALGGLI 627 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + N VP+LG +P FG F++ + EL++FI PR+V Sbjct: 628 QQSNTLNHSQVPILGKMPIFGNAFKNKEDTINKTELIIFIKPRIV 672 >UniRef50_B5EAZ0 Type II and III secretion system protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EAZ0_GEOBB Length = 494 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 25/256 (9%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAG-------GVGQVTTLGSDLSVATATTHV 232 QV L + +++ +L+ LG+ + A G VG++ D SV + T + Sbjct: 210 QVLLEVKVAQVDKTALKSLGISAFIRGASAEGFSNLVGAPVGELAIKNPDGSVRSQATGI 269 Query: 233 G------FNIGRINGRLLDLE---------LSALEQKQQLDIIASPRLLASHLQPASIKQ 277 N I+ L + L AL K ++A P L+ Q Sbjct: 270 AGPIPGLANFTPIDSYQLGVSSFKAGIGAVLRALVTKNLAKVLAEPNLMVQSGQVGKFLA 329 Query: 278 GSEIPYQVSSGESG--ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 GS+IPY + SG ATS++F + + + P VL+ G I LK+ ++ + + Sbjct: 330 GSKIPYSIVSGVGALSATSIQFIDVGVKLNFKPEVLENGLISLKIDPAEVSSITGVLAVN 389 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 G + ID +E+ T+V++K GE+L L G+ + +P+LGDIP G LFR + Sbjct: 390 GYPI-IDTREVRTRVKLKDGESLILAGLLQEEAIKAMSKIPILGDIPILGALFRSTQDDI 448 Query: 396 ERRELVVFITPRLVSS 411 + +ELV FITP+LV++ Sbjct: 449 KEKELVFFITPKLVTA 464 >UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVD5_9GAMM Length = 694 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 30/288 (10%) Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 D TN L++ AL +E V Q+D+ QV + A IV +++ + RELG + A+ Sbjct: 326 DPGTNSLIITAAPDALRNIESVVRQLDIRRAQVHVEAIIVEVSDTAARELGFSYLFANEN 385 Query: 209 H-------------------AGGVGQVTT-LGSDLSVATATTHVGFNIGRINGRLLDLEL 248 G+ +T GS SV T VGF +G + L Sbjct: 386 GFDNETNPVGGALLGGGGDVINGIAAASTGDGSGASVPNGFT-VGFGDRDNSGNVFAGIL 444 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY---QVSSGESGAT----SVEFKEAV 301 A+ + +++++P ++ + A I G +P+ ++ SGA +VE ++ Sbjct: 445 RAVASDTEANLLSTPSIVTLDNEEAEIVVGQNVPFVTGSYTTASSGANNPFQTVERQDVG 504 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 + +++TP + + IRL I Q V L +K+EI+T V ++ G+ L LG Sbjct: 505 VTLKITPQINEGDVIRL--DIEQEASSVVESSVASGQLITNKREIKTSVMIEDGQMLVLG 562 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+ + + VPLLGDIP G+LF++ +++R L+VF+ P+++ Sbjct: 563 GLIDDQTRKSLFKVPLLGDIPLLGRLFQYRTNSNDKRNLMVFLHPKIL 610 >UniRef50_Q0BFS7 Type II and III secretion system protein n=7 Tax=Burkholderia RepID=Q0BFS7_BURCM Length = 812 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 99/408 (24%), Positives = 185/408 (45%), Gaps = 36/408 (8%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDV--SGTVSLHLTDVPWKQAL 71 P + A + V+L P+A + ++ +N V DV S +L + A+ Sbjct: 169 PQLSDALRKPVSLNFKQQPLANIFDVISRVSGVNFVFDRDVDTSHAATLFAERTTAEDAI 228 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 ++++ L E +L H++ + + E+AR + R+ L +ADA Sbjct: 229 NLLLRTNQL----EKKVLDRHTLL-----VYPSQPEKARNYTEFAI--RTFFLSHADAKS 277 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 + A +++ K + VD+R N +++RD + E+ V +D+P +V L ++ +N Sbjct: 278 VMAALRQMIKPK-DVYVDERVNAVVMRDTPETIQVAERVVMGLDIPQSEVTLDVQVLEVN 336 Query: 192 EKSLRELGVKWTLADAQHA-GGV-GQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELS 249 +LGV++ +A GGV G TLG L + V G L L + Sbjct: 337 MNDSLDLGVQYPGKIQFNALGGVEGGALTLGDLLRLNRDRVGVSSESGG-----LALAID 391 Query: 250 ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT--SVEFKEAVLGMEVT 307 L+++ + +A+P++ +++ A+IK G +P ++ +G SV +++ L ++V Sbjct: 392 LLQKQGKTKTLANPKIRVRNMEKANIKIGERVPIVTTTNANGVVTESVSYQDVGLMLKVE 451 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEV-------LAIDKQEIETQVEVKSGETLAL 360 P RI L +S V +V E ++ + ET + K+GET L Sbjct: 452 P------RISLNEEVSVKVNMEVSSILTKETTKTGLVAYSLGTRNAETLMTAKNGETQIL 505 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 G+ R +P + +P G+LF +G+ +ER E+V+ ITP + Sbjct: 506 AGLVKRNESDSVAGLPGVSGLPVLGRLFGSNGRSNERSEIVLLITPHI 553 >UniRef50_P55702 Uncharacterized protein y4xJ n=5 Tax=Rhizobiales RepID=Y4XJ_RHISN Length = 423 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 115/238 (48%), Gaps = 16/238 (6%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATA---TTHVGFNI 236 QV LS + ++ L+ LG+ + A Q V G+ L AT T +GF+ Sbjct: 148 QVNLSVRVAEVSRSGLKALGINLS-AFGQFGNFKVGVLNRGAGLGSATGSGGTAEIGFDN 206 Query: 237 GRIN-GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSV 295 ++ G +LD AL ++ ++A P L A + AS G E P V E+G TSV Sbjct: 207 DAVSVGAVLD----ALAKEHIASVLAEPNLTAMSGETASFLAGGEFPIPVLQ-ENGQTSV 261 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQ---QADG-EVLAIDKQEIETQVE 351 EF+ + +E PTVL I +H+ V LQ Q +G V A+ + +T VE Sbjct: 262 EFRRFGVSLEFVPTVLDNNLI--NIHVKPEVSELSLQGAVQVNGIAVPAVSTRRADTVVE 319 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + SG++ +GG+ R + + P LG IP G LFR + E ELV+ +TP +V Sbjct: 320 LASGQSFVIGGLIRRNVNNDISAFPWLGRIPILGALFRSSSFQKEESELVILVTPYIV 377 >UniRef50_P31701 General secretion pathway protein D n=27 Tax=Enterobacteriaceae RepID=GSPD_PECCC Length = 650 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/345 (26%), Positives = 153/345 (44%), Gaps = 51/345 (14%) Query: 103 RQEAEQARAQANLPLENRSITLQYADAGELAKA----GEKL----------LSAKGSMTV 148 RQ+A Q + I L+YA A +L + G+ + L S+ Sbjct: 252 RQQAVQGNTKV--------IYLKYAKAADLVEVLTGVGDSIQTDQQNALPALRKDISIKA 303 Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 ++TN L++ + LEQ +AQ+D+ QV + A I + + LGV+W A Sbjct: 304 HEQTNSLIVNAAPDIMRDLEQVIAQLDIRRPQVLVEAIIAEVQDADGMNLGVQW----AN 359 Query: 209 HAGGVGQVTTLG--------------SDLSVATATTHV--GFN---IGRINGRLLDLELS 249 GV Q T G D ++ TA T GFN G G + ++ Sbjct: 360 KNAGVTQFTNTGLPITTMMAGADQFRRDGTLGTAATTALGGFNGIAAGFYQGNW-GMLMT 418 Query: 250 ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGME 305 AL + DI+A+P ++ A+ G E+P Q +SG++ +VE K + ++ Sbjct: 419 ALSSNSKNDILATPSIVTLDNMEATFNVGQEVPVLAGSQTTSGDNVFQTVERKTVGIKLK 478 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLA-IDKQEIETQVEVKSGETLALGGIF 364 V P + + + L++ + + + A + + + V V SG+T+ +GG+ Sbjct: 479 VKPQINEGDSVLLEIEQEVSSVADAASSSSTNLGATFNTRTVNNAVLVSSGDTVVVGGLL 538 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + + VPLLGDIP G LFR + E ++R L++FI P ++ Sbjct: 539 DKSTNESANKVPLLGDIPVLGYLFRSNSTETKKRNLMLFIRPSII 583 >UniRef50_D2L5I8 Type II and III secretion system protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5I8_9DELT Length = 527 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 10/192 (5%) Query: 226 ATATTHVGFNIGRIN-------GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQG 278 ATAT + G + R N + L L++ + I+A P L+ + Q A G Sbjct: 268 ATATMNQGTAVARWNTNWGGAGNTAMTAVLDVLKENGLVKILAEPNLVCLNGQTADFLAG 327 Query: 279 SEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLH--ISQNVPGQVLQQADG 336 +IP V SG G TS+E+K+ +G++ TPT++ RI L++H +S +Q Sbjct: 328 GQIPVPVPSG-LGTTSIEWKDFGVGLKFTPTIVGGDRINLQVHPEVSDLDYAHAIQLQGS 386 Query: 337 EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDE 396 + AI+ + T VE+K+G+T A+ G+ + +S D P++GDIP G LF+ + + Sbjct: 387 TIPAINTRRTSTTVELKNGQTFAVAGMLKEEARSTFDKYPVVGDIPILGNLFKSSQFQKD 446 Query: 397 RRELVVFITPRL 408 + ELV+ IT L Sbjct: 447 QTELVILITAHL 458 >UniRef50_Q07N78 General secretion pathway protein D n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07N78_RHOP5 Length = 789 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 151/333 (45%), Gaps = 35/333 (10%) Query: 104 QEAEQARAQANLPLEN----RSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNR----- 154 Q A + + A P N S L G + AG+K A + + D R+ R Sbjct: 437 QPATTSGSTAPTPASNAGGVSSTNLVKTSFGADSSAGQKPTGADDATSTDSRSGRSGKVR 496 Query: 155 ---------LLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 L + + +E+ + +MD QV + I I S + GV++ L Sbjct: 497 VTPDVTNNVLFVETTPQTYAVVERAIREMDRFPTQVNIEVTIAEITLTSELQYGVQFFLK 556 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE--LSALEQKQQLDIIASP 263 + G+G + + T++ G N+ ++G LLD + L AL Q + +++SP Sbjct: 557 SGNFSAGLGGAS------GIPLRTSYPGLNL--VSGALLDPQVVLDALAQFTSVKVLSSP 608 Query: 264 RLLASHLQPASIKQGSEIPY---QVSSGESGAT--SVEFKEAVLGMEVTPTVLQKGRIRL 318 L+ QPA ++ G +IP Q++S ES AT +V+ K+ + + V P V G + Sbjct: 609 SLVVLDRQPAVLQVGDQIPILTRQLTSAESTATVSNVDLKDTGIILNVLPRVNANGLV-- 666 Query: 319 KLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLL 378 L++ Q + V Q D I ++ +++ + V SG+T+ L G+ T ++ +P++ Sbjct: 667 TLNVEQQISNVVSTQPDTLTPTISQRRVKSVISVSSGQTVLLAGLITDGQNINRNGLPVV 726 Query: 379 GDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 I L + R EL++FI P++++S Sbjct: 727 SQIKVLSDLLSSHDRTASRTELIIFIRPKIIAS 759 >UniRef50_Q48IR4 Type III secretion component, putative n=3 Tax=Pseudomonas syringae group RepID=Q48IR4_PSE14 Length = 437 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 9/235 (3%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHV---GFNI 236 QV + ++ L GV W G +T A ++V G Sbjct: 171 QVNIRVRFAEVSRSELLRYGVNWNALFNNGTFSFGLLTGGALAADAAGGASNVISAGLAS 230 Query: 237 GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 G +N +D L AL+ L+++A P + A Q AS G E+ V +E Sbjct: 231 GNVN---IDAMLEALQSNGVLEVLAEPNITAMTGQTASFLAGGEVAVPVPVNRE-VVGIE 286 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLH--ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 +K + + +PT+L GRI L++ +S + L +V + + +T+VEV S Sbjct: 287 YKPYGVSLLFSPTLLPNGRIALQVRPEVSSLMSTTTLDVNGYQVPSFRVRRADTRVEVGS 346 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+T A+ G+F R++ D VP+LGD+P G LFR + ELV+ ITP LV Sbjct: 347 GQTFAIAGLFQRESSQDMDKVPMLGDMPILGNLFRSKRFQRNETELVILITPYLV 401 >UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax=Alteromonadales RepID=Q21EP4_SACD2 Length = 666 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 45/336 (13%) Query: 120 RSITLQYADAGELAKAGEKLL---------------SAKGSMTVDKRTNRLLLRDNKTAL 164 R + L YA+A ++A K++ ++ D+ TN LLL + L Sbjct: 273 RVVYLNYANAKDVAATLSKVVQNMQQMQPGGKDKGGKDGATVEADEDTNALLLTGSGDML 332 Query: 165 SALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLS 224 ++L V ++D+ QV + A IV IN + +ELGV+W ++ + G GS S Sbjct: 333 NSLLTIVERLDIKRAQVLVEAIIVDINVDANKELGVQWMFSNENNGTFGGSSQGDGSLGS 392 Query: 225 VATAT--------THVGFNIGRINGRLLDLE-----------LSALEQKQQLDIIASPRL 265 +AT T T++ I G+LL + LSAL+ +I+++P L Sbjct: 393 LATGTLGGGTDALTNLASGIAGNTGQLLGVAGNNGGENFIALLSALQTSSDANILSTPSL 452 Query: 266 LASHLQPASIKQGSEIPYQVSSGESGA---------TSVEFKEAVLGMEVTPTVLQKGRI 316 + Q ASI G +P++ S + T+++ ++ + + VTP V + +I Sbjct: 453 VTMDNQEASISVGQSVPFRTGSYSTTGTTGSVGNPFTTIQREDVGITLTVTPHVNEGNKI 512 Query: 317 RLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP 376 L + + + + L ++ +IETQ+ G+ + LGG+ + G VP Sbjct: 513 LLDISQEVSSISSSVAGSAD--LITNQSKIETQLLANDGQIVILGGLIQEDVQDGDTRVP 570 Query: 377 LLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 LLG IP G LF++ + ++ L+VFI ++V+ + Sbjct: 571 LLGSIPLLGHLFKYQSTKFLKKNLMVFIRVKIVTDD 606 >UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified Gammaproteobacteria RepID=A0Z790_9GAMM Length = 696 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 99/367 (26%), Positives = 167/367 (45%), Gaps = 83/367 (22%) Query: 114 NLPLEN----RSITLQYADAGELAK--------------AGEKLLSAKGSMTV--DKRTN 153 + PLE + + L+YADA E+A+ G++ S + T+ D+ TN Sbjct: 280 DTPLEQSGNVKVVYLEYADAVEVAEVLTRVMQNMSRLDTGGDRKPSTNTNSTIEADEGTN 339 Query: 154 RLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGV 213 L++ + +++LE +A++D+ QV + A IV + +ELG++W AD A Sbjct: 340 ALIITADADEMASLEAVIARLDIRRAQVLVEAIIVEMEITEGQELGLQWIFADDSGA--- 396 Query: 214 GQVTTLGSDLSVATATTHVGFNIG-----------------------RINGRLL------ 244 GS++S ++A IG ++ G L Sbjct: 397 -----FGSNVSTSSAQQQRNAAIGNALLGDENSNADIGVRDLAGALSQVPGTTLGWGVVG 451 Query: 245 -DLELS----ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES--GATSV-- 295 DL +S ALE + +I+++P LL Q A I G +P+ S + GA++V Sbjct: 452 DDLSMSVILNALETQGNANILSTPSLLTLDNQEAYITVGQNVPFVTGSYSNTGGASNVQN 511 Query: 296 -----EFKEAVLGMEVTPTVLQKGRIRLKL-----HISQNVPGQVLQQADGEVLAIDKQE 345 E + + ++VTP V + + L + ISQ Q+L AD + ++++ Sbjct: 512 PFQTIERENVGITLKVTPQVNEGDSVVLDIVQEVSSISQ----QLLAAAD---VITNERK 564 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 IET+V + G+ + LGG+ + Q VP L DIP G+LFR+D + L+VFI Sbjct: 565 IETKVMAQDGDVVVLGGLVKDDVQDSQQGVPFLQDIPLLGRLFRNDVVSVTKSNLLVFIR 624 Query: 406 PRLVSSE 412 P +V + Sbjct: 625 PTIVRDD 631 >UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Burkholderia RepID=B2T7P2_BURPP Length = 791 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 32/299 (10%) Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 G + D TN L++ + L + Q+D QV L A IV +N + LG++W Sbjct: 376 GMIQADSATNSLIITAAEPVYRNLRAVIDQLDARRAQVYLEALIVELNSNTSGNLGIQWQ 435 Query: 204 LADAQ------------------HAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRL-- 243 +A+ A V +T G ++ T G NIG I+ Sbjct: 436 VANNSIFAGTNLQTGSSNSIVNLTAAAVAAGSTGGLAGALGNGTLQQGLNIGWIHNIFGV 495 Query: 244 --LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS--------GESGAT 293 L L AL Q +++++P L+ + A I G+ +P Q S S Sbjct: 496 QGLGALLQALSQTADANVLSTPNLITLDNEEAKIVVGTNVPIQTGSYSNLTSATATSAFN 555 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQN--VPGQVLQQADGEVLAIDKQEIETQVE 351 + + + L + V P + G ++L+L+ + V G + K+ I++ V Sbjct: 556 TYDRVDVGLTLHVKPQITDGGILKLQLYTEDSAIVTGTNNAATNPAGPEFTKRSIQSTVL 615 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +GE + LGG+ + VPLLGDIPW GQLFR + K + L+VF+ P ++S Sbjct: 616 ADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSEQKTRNKTNLMVFLRPVIIS 674 >UniRef50_C0QPL4 General secretion pathway protein D n=1 Tax=Persephonella marina EX-H1 RepID=C0QPL4_PERMH Length = 669 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 24/282 (8%) Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 DK +N +++ NKT A+++ V +D QV ++A I ++E++L+E+GV+W + +Q Sbjct: 340 DKASNSIIIYANKTEYEAIKELVQNLDKQKKQVLVTALITEVSEQALKEIGVRWQVFGSQ 399 Query: 209 ----HAGGV---GQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL-----EQKQQ 256 GG+ G +GS VA + G N+ I G +L E+ Sbjct: 400 GGAAFRGGISKEGFYNIIGSTNFVAGVLSTSGENV-EIGGNVLFFPDLLFLFSLLERGTG 458 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTVLQ 312 +I++SP++L ASI P+ + + + ++KE L ++VTP + Sbjct: 459 FNIVSSPKILTMDNIEASINVSQVTPFAQSVKFDINGNPIINYDYKEVGLILKVTPHI-S 517 Query: 313 KGRIRLKLHISQN-VPGQVLQQADGEVLAI----DKQEIETQVEVKSGETLALGGIFTRK 367 I +++H N V G Q GE+ + K+E+ T + V +G+T+ LGG+ ++K Sbjct: 518 GDNIVMEIHQEVNEVIGYEKPQI-GEISYVVPITSKRELNTTITVTNGKTIVLGGLVSKK 576 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + VP IP G LF++ ++ + L VF+TP ++ Sbjct: 577 TIKTMEGVPFFSSIPIIGNLFKYRSEDLNKTNLFVFLTPFII 618 >UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUV6_SYNAS Length = 717 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 18/286 (6%) Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 G+ +A M+ D R N +++ L + +D+P QV + A IV + Sbjct: 419 GDAFDAAGLRMSADDRKNMIIILSKPDVYRNLLNLLQALDVPARQVLIEATIVELTLTDE 478 Query: 196 RELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQ 255 + GV+W + ++ G TLG+ + + + G+ L +SAL +K Sbjct: 479 LKYGVEWFIRNSWD----GDSYTLGTLGKLGLEPLGLTYAFLSRTGQFEAL-ISALAEKS 533 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPY---QVSSGESGAT--------SVEFKEAVLGM 304 + +I+++PRL+ A+I+ G ++P Q+S+ +S T S++++ + + Sbjct: 534 KANILSTPRLMVLDNMEATIQVGKDVPTVTGQISTLDSVNTTDSTSVSQSIQYRSTGVML 593 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 +V PT+ +G + L I+Q V G+ I + I T + G+T+ LGG+ Sbjct: 594 KVKPTINTEGL--MTLEITQEVSDIAETPGVGDSPIILTRRINTSIIAAHGQTIVLGGLM 651 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 G+ VPLLGDIP G LF+ K ++ EL+V +TP +++ Sbjct: 652 QENQSLGESKVPLLGDIPILGNLFKATSKTKDKTELLVLVTPTILT 697 >UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseudomonas RepID=B1J7E4_PSEPW Length = 745 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 36/307 (11%) Query: 127 ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 A + E A K L +T K +N+LL+R +E + ++D P QV++ Sbjct: 427 ASSAESADGSVKSLEESVRITAQKSSNQLLVRTRPAQWKEIESAIKRLDSPPLQVQIETR 486 Query: 187 IVTINEKSLRELGVKWTLAD----------AQHAGGVGQVTTLGSDLSVATATTHVGFNI 236 I+ + +LGV+W L A +G G + G VA + + ++ Sbjct: 487 ILEVKLTGDLDLGVQWYLGRLAGNSSSTTVANESGSQGALGAGG----VALGSASMFYSF 542 Query: 237 GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP-----YQVSSGESG 291 N L + L ALE + ++++P L+ + Q A I+ G IP S ++ Sbjct: 543 VSSN---LQVALRALETRGLTQVLSAPSLVVLNNQQAQIQVGDNIPISQTTVNTSDSDTT 599 Query: 292 ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLA-------IDKQ 344 +SVE+ + + ++V P + G + + + Q + AD + I + Sbjct: 600 LSSVEYVQTGVILDVVPRINPGGLVYMDIQ-------QQVSDADDSAVTTTQPNPRISSR 652 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 + TQV V+SG+T+ LGG+ + N VP L IP G LF K +R EL+V I Sbjct: 653 AVSTQVAVQSGQTVLLGGLIKQDNGQSDTRVPGLSSIPGLGWLFGSTSKSRDRTELIVLI 712 Query: 405 TPRLVSS 411 TPR+V++ Sbjct: 713 TPRVVNN 719 >UniRef50_C3KN98 Type II and III secretion system protein RhcC2 n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN98_RHISN Length = 447 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 43/251 (17%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD------LSVATATTHVG 233 QV + + L G+ W+L + G V T G+ +++ HV Sbjct: 182 QVNIRVRFAEVARNELTRFGIDWSLFVNSGSFSFGIVRTGGASNEDDTGIAIGARGDHVN 241 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 N+ LLD AL+ L I+A P + A Q AS G EIP V +G+ G Sbjct: 242 VNV------LLD----ALQANGILTILAEPNITAVTGQTASFLAGGEIPVPVPAGD-GQI 290 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQN--------------VPGQVLQQADGEVL 339 +E+K+ + ++ TPT+L RI L++ + VP +++AD Sbjct: 291 GIEYKQFGVSLQFTPTLLPNNRIALQVRPEVSSVSQDSVVSISGLVVPSLRIRRAD---- 346 Query: 340 AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRE 399 T VEV SG+T A+ G+F R+ + P++GD+P G+LF+ + E Sbjct: 347 --------TAVEVGSGQTFAIAGLFQRQESQTLNKTPVVGDVPILGELFKSKRFQRNETE 398 Query: 400 LVVFITPRLVS 410 LV+ ITP LV+ Sbjct: 399 LVILITPYLVT 409 >UniRef50_C8SRS2 Type II and III secretion system protein n=2 Tax=Mesorhizobium RepID=C8SRS2_9RHIZ Length = 481 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 40/249 (16%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATAT---THVGFNI 236 QV+L+ V IN ++ ++LG K++ A A G G G D+S+ T G I Sbjct: 188 QVQLNVRFVEINRQAGQDLGAKYS---ANFAYGFG-----GRDVSLEPGTVPAAGTGEII 239 Query: 237 GRI--NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 GR+ NG +D+ + ALE++ +A P L+A + AS G E P VS E+G S Sbjct: 240 GRLLSNGVSIDIAIKALEERGLARRLAEPNLIARSGETASFLAGGEFPIPVSE-ENGKIS 298 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKL---------HISQN-----VPGQVLQQADGEVLA 340 V +K+ + ++ PTVL+ G + L + S N VPG ++++A Sbjct: 299 VSYKKYGVSLDFKPTVLKDGLVSLDIAPEVSSIDASASYNIGNISVPGFIVRRA------ 352 Query: 341 IDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERREL 400 T V++K+G++ + G+ +N +P LG +P G LF + +L Sbjct: 353 ------RTSVDLKNGQSFMIAGLLQSQNDITTSRIPGLGKMPVLGALFSSKSYQRRETDL 406 Query: 401 VVFITPRLV 409 V+ +TP LV Sbjct: 407 VIIVTPYLV 415 >UniRef50_B1Y7C9 Type II and III secretion system protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y7C9_LEPCP Length = 662 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 98/406 (24%), Positives = 191/406 (47%), Gaps = 35/406 (8%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV--SLHLTDVPWKQALQ 72 G++AA + VTL D V V +AL+ +N+++ DV + ++++ + + L Sbjct: 181 GLEAAFKRPVTLQFRDANVKMVFEALSRTANINIILDRDVRADLRTTIYVQNASVEDTLD 240 Query: 73 TVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 ++ L R GN + V+ A A+ + L+ R+ L +A + Sbjct: 241 LILLQNQLDRRVLNGNTIFVYP------------ATPAKQREYNELKVRTFQLSNIEAAQ 288 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +A + +L + +T D ++N L++RD +++ E+ +A D+P +V L ++ ++ Sbjct: 289 MATIIKTMLKTRDVVT-DAKSNSLVMRDTAASIAVAEKLIAANDVPDPEVVLEVQVLEVS 347 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 L +G+++ DA G TT+G DL T+ + L L L+ L Sbjct: 348 SDRLSNIGLRF--PDAFTVGTPSTATTVG-DLRALTSDN--------LTASSLSLGLNLL 396 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS------SGESGAT--SVEFKEAVLG 303 Q +I+ASPR+ A + + A I G ++P + SG+S S+++ + + Sbjct: 397 LQDTDTNILASPRIRARNKEKARILVGDKVPVITNLITPQQSGQSSVITGSIQYVDVGIK 456 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 +EV P V G + +K+++ + + + + G I + T + + GET + G+ Sbjct: 457 LEVEPQVYADGDVGIKVNLEVSNIAKTITTSSGVAYQIGTRNATTALRLHDGETQMMAGL 516 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +++S +P LG +P G+LF + E+V+ ITPR+V Sbjct: 517 INDQDRSTASKLPGLGQLPVIGRLFTSTNASGGKSEIVLSITPRIV 562 >UniRef50_B5EGL2 Type II and III secretion system protein n=3 Tax=Geobacter RepID=B5EGL2_GEOBB Length = 451 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 13/169 (7%) Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV--SSGESGATSVEFKEAVLGME 305 L AL K I+A P LL + + GS IPY V S+G + +S+ F+ + ++ Sbjct: 257 LQALSSKGLAKILAEPNLLVKSGEEGNFLAGSRIPYSVLISTGGASTSSIVFETVGVKLK 316 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQA-----DGEVLAIDKQEIETQVEVKSGETLAL 360 P VLQ G I LK+ P +V A +G + ID +++ T VE++ GE+L L Sbjct: 317 FKPQVLQNGLINLKID-----PAEVSSIAGTLAVNGYPI-IDTRDVRTDVELRDGESLVL 370 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+ + +PLLGDIP G LFR K+ ++LV FITP++V Sbjct: 371 AGLLQEEQIKNMSKIPLLGDIPILGALFRSSQKDIREKDLVFFITPKIV 419 >UniRef50_Q7MK00 Flp pilus assembly protein, secretin CpaC n=2 Tax=Vibrio vulnificus RepID=Q7MK00_VIBVY Length = 462 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 15/234 (6%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGV--GQVTTLGSDLSVATATTHVGFNIG 237 QV +S +V + + + ELG++W + GV G G DL+ +G Sbjct: 193 QVNISIRMVEMAKSTSEELGIRWQSVNPNWMLGVSPGNQFATGIDLTDPDNLIKESAFMG 252 Query: 238 RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 I+ AL K ++++A P L A + A G E P+ GES VEF Sbjct: 253 IID---------ALASKSLVNVLAEPNLTAKSGEKAEFLVGGEFPFPSIDGES--VGVEF 301 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLH-ISQNVPGQVLQQADG-EVLAIDKQEIETQVEVKSG 355 K +G+ VTPTVL + RI L + + + Q + +G +V +DK+ T +E+ G Sbjct: 302 KSFGVGLSVTPTVLSENRISLTVTPVVSALSRQNSIKINGVDVPGLDKRTATTTIELADG 361 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ++ AL G+ ++ D++P LG++P G LFR + + RELV+ T LV Sbjct: 362 QSFALAGLLRTSEENSVDAIPFLGELPGVGALFRTNKNQQIERELVIIATASLV 415 >UniRef50_C0QK68 GspD2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QK68_DESAH Length = 761 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 69/244 (28%), Positives = 126/244 (51%), Gaps = 31/244 (12%) Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVT-TLGSDLSVATATTHVGFNIGRI 239 +E++ VT+N+ S LGV+WT + G + TLGS T + +N G Sbjct: 503 IEVTLAEVTLNDSS--SLGVEWTFIKDGGSVADGLIQGTLGS-------TNVLQYNFG-- 551 Query: 240 NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP-------YQVSSGESGA 292 N + L+AL K ++I++SP +LAS + A I +E+P Y + A Sbjct: 552 NTQKWAATLTALASKGDVNILSSPSVLASDNKEAKIDISTEVPVVTTEYKYGTDGDDMLA 611 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG------EVLAIDKQEI 346 T+++++ + + VTP + ++G + ++++ +V +QAD E + K+ + Sbjct: 612 TNIQYRNTGVILTVTPHINERGLVSMEIN------QEVSEQADAVLAGGQEYPSFYKRSV 665 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 +T + V +T+A+GG+ +K + +PLL +P+F LF +E+ EL++ ITP Sbjct: 666 QTTLTVNDNQTIAIGGLMRKKEEDSSAGIPLLNQLPFFKYLFGKTAGGNEKNELIILITP 725 Query: 407 RLVS 410 R+VS Sbjct: 726 RVVS 729 >UniRef50_C9KL82 Putative type IV pili biogenesis protein PilQ n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL82_9FIRM Length = 430 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 99/408 (24%), Positives = 171/408 (41%), Gaps = 51/408 (12%) Query: 33 VAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVH 92 V VL +LA N+V+ V+GTV+LH T+ P K L+ + S GL+ +EG+ V Sbjct: 37 VRSVLLSLARTAHENIVLDDSVAGTVTLHATEEPAK-LLRMIAASKGLVLIKEGSTYLVT 95 Query: 93 SIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE-KLLSAKGSMT---- 147 ++ A+ R+ P +++AD +LA A E L S G T Sbjct: 96 TMP---------RADALRSVHVYP-------VRHADPADLAHAAELSLKSVAGDKTADGQ 139 Query: 148 ---------VDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 VD TN +L + + + V Q+D QV L A ++ +++ + ++L Sbjct: 140 ETGTARRVLVDSATNSVLFYGTAAEAANVAKVVQQLDRKPRQVSLEAKVLALSKDASKKL 199 Query: 199 GVKWTLAD----------AQHAGGVGQVTTLGSDLSVATATTHVGFNIGR-INGRLLDLE 247 GV+W + +H G +V T GR G + Sbjct: 200 GVEWQWSSLPQYPDFETTYRHKGSANEVQEKEIKRHTQDGTVPGIIQFGRGPEGVPFEFY 259 Query: 248 LS----ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS--GESGATSVEFKEAV 301 S AL + + ++A P + + A I G E+P S + T+ +++A Sbjct: 260 YSATIQALVTQGKAKMLARPNITTVQGREALINIGGEVPVPTQSVTNNTTTTTYTYRQAG 319 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 + + TP + + GRI +H + P L D + + +T V ++ GET+ +G Sbjct: 320 IILRCTPRIHEDGRITATVHTEVSSP---LYVEDIKAYRFQNRSADTTVSLRDGETMVIG 376 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+ +P LGD+P G FR + E+++F+T ++ Sbjct: 377 GLIGSDESRTLSKIPFLGDLPILGSFFRSVRQSRSESEIMIFLTAHVI 424 >UniRef50_C1A7C5 Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7C5_GEMAT Length = 621 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 132/281 (46%), Gaps = 14/281 (4%) Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 LL + ++ + TN L++R L + + +D+ QV I I E Sbjct: 314 LLVGRTTVVANTPTNSLVIRTAPPNFPMLRETIEALDIRPAQVLFEVTIAEIALGRGFEF 373 Query: 199 GVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 G+ W A + GG Q G+ T +T + R++G + L + K ++ Sbjct: 374 GIDWA---AVNRGGDVQAQ-FGNPEIPDTGSTSALLRVVRLDGTGVRALLRTIASKSEVQ 429 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT-----SVEFKEAVLGMEVTPTVLQK 313 ++A+P ++A++ + ASI GS++P+ +SS G +V++++ + + PT+ + Sbjct: 430 VLATPEIMAANNREASILVGSKVPF-ISSTRLGNDISIDRAVQYQDVGTKLAIIPTINDE 488 Query: 314 GRIRLKL--HISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 G I ++L +S P V V I +E T+ ++ G+T + G+ + Sbjct: 489 GYISVQLLQEVSSLTPQTVAAALSAPV--ISTREASTRAVLRDGQTAVIAGLIGETRTTQ 546 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 +P+L DIPW G LF+ +R EL +F+TP +V S+ Sbjct: 547 DQGLPILKDIPWLGALFKRQSSTRQRTELAIFVTPYVVRSD 587 >UniRef50_A1ASI5 Type II and III secretion system protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASI5_PELPD Length = 386 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 28/255 (10%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQV--------TTLGSDLSVATATTH 231 QV L + I++ +L+ LGV + L Q+A G + T+ D +++TA Sbjct: 109 QVLLQVKVAQIDKTALKNLGVSF-LVKNQNANGFSNMIGAPSTSSTSASGDGTISTANGI 167 Query: 232 V-GFNIGRINGRLLDLE---------LSALEQKQQLDIIASPRLLASHLQPASIKQGSEI 281 + GF+ +N + + + AL K I+A P L+ Q GS I Sbjct: 168 IDGFS--SLNPYTMGITHFPSGVSAVIKALATKGMAKILAEPNLVVKSGQKGEFFAGSRI 225 Query: 282 PYQV--SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQ--NVPGQVLQQADGE 337 P+ V ++G + S+ ++E + + P V++ G I L+L + N+ G + + +G Sbjct: 226 PFSVLENTGSTSTPSIRWEEVGVKLNFKPFVMESGTIALELDPVEVSNIQGTL--ETNGY 283 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 + ID + I+T E++ GE+L L G+ + VPLLGDIP G LFR E + Sbjct: 284 PV-IDTRTIKTSAELRDGESLVLAGLLRDETYKSISKVPLLGDIPILGALFRTTENEQKE 342 Query: 398 RELVVFITPRLVSSE 412 ELV FITP+LV E Sbjct: 343 TELVFFITPKLVMPE 357 >UniRef50_A3UH04 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UH04_9RHOB Length = 622 Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 74/298 (24%), Positives = 139/298 (46%), Gaps = 36/298 (12%) Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 AGE A A + S + VD NRL+ N+ L + + Q+D PV +V + I Sbjct: 302 AGETAGASSAVSS---RLAVDTFGNRLIFTGNRNEYDNLARLLGQLDTPVSEVLVEVTIA 358 Query: 189 TINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATA---TTHVGFNIGRINGRLLD 245 + LGV++ L TLG D+ V T+ G ++ LD Sbjct: 359 EVIFSDTTRLGVEFFL------------NTLGGDVQVGTSDGLGLSSGGLSAIVDAGQLD 406 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS-----SGESGAT----SVE 296 +E +A ++++++PR++A + A ++ G+++P S + +SG+T SV Sbjct: 407 IEAAARSTNSNINVLSTPRIVARSGESAEVQVGTDVPIITSQRAANTQDSGSTDILQSVS 466 Query: 297 FKEAVLGMEVTPTVLQKGRIRL----KLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 ++ + + V P V RI L ++ + + P Q + I + + + + + Sbjct: 467 YRSTGVLLTVEPRVYSNNRIDLTIMQEVSSADDNPNQAIASP-----IISNRRMTSSITL 521 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + G+T LGG+ + G VPL+ DIP G +F+ + +++R L+V +TP +++ Sbjct: 522 QDGQTAVLGGLMSETVNRGSTGVPLVQDIPVLGNIFKTETFSNDQRVLLVLVTPYILN 579 >UniRef50_B1JDL3 General secretion pathway protein D n=6 Tax=Pseudomonas RepID=B1JDL3_PSEPW Length = 650 Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 108/405 (26%), Positives = 188/405 (46%), Gaps = 65/405 (16%) Query: 65 VPWKQALQTVVKSAGLITR---QEGNILSVHSIAWQNNN--IARQEAEQARA---QANLP 116 +P + A + +A L+TR +E S +A +N + R ++ RA Q + P Sbjct: 201 MPLRHA--SAADTAQLLTRLLAREQGADSTQVVADPRSNALLVRGSTDRVRALLGQLDQP 258 Query: 117 LENRS------ITLQYADAGELAK---------------AGE-----KLLSAKGS----- 145 ENR I L++A+AGE+ K AGE K + A S Sbjct: 259 SENRHSSNTQVIYLRHANAGEVVKVLRGLSQEGGVPSEGAGEGEAKDKPVMAAASDSGIR 318 Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 + ++ TN +++ + L+A V Q+D+ QV + A I +++ +ELGV+W A Sbjct: 319 LEYEEGTNAVVMVGPDSELAAYRSIVEQLDIRRAQVVVEAIIAEVSDSRAQELGVQWLFA 378 Query: 206 DAQHAGGVGQVTTLGSDL----------------SVATATTHVGFNIGRINGRL-LDLEL 248 D + G+ + G ++ + +ATT V IG G + + Sbjct: 379 DEKFGAGIVNFGSNGVNIANIAGAAASGDNEALGDLLSATTGVTAGIGHFGGGFNFAMLI 438 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS----GESGATSVEFKEAVLGM 304 +AL+ K +++++P LL ASI G E+P+ S + ++E KE + + Sbjct: 439 NALKGKSGFNLLSTPTLLTLDNAEASILVGQEVPFVTGSVTQNNANPYQTIERKEVGVKL 498 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 + P + +RL I Q V A +V+ +K+EI+T+V V+ + LGG+ Sbjct: 499 RIKPQINIDNSVRL--DIVQEVSSIADSSAASDVIT-NKREIKTKVMVEDNGLVILGGLI 555 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + + + VP LGDIP G+LFR + ++ ++ L+VFI PR++ Sbjct: 556 SDELSTSDQRVPFLGDIPGLGRLFRSEASKNTKQNLMVFIRPRIL 600 >UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyphomonadaceae RepID=Q0ASR3_MARMM Length = 650 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 57/343 (16%) Query: 120 RSITLQYADAGE-----LAKAGEKLLSAKG-----SMTVDKRTNRLLLRDNKTALSALEQ 169 R I L +AD GE L + + L++ +G S++ TN L++ + LE Sbjct: 263 RVIYLSHAD-GEHLLPILQQVVDTLVAGEGTTRAPSVSHHAPTNALVINADPDVQRQLEL 321 Query: 170 WVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGV---------------- 213 + Q+D+ QV + IV +++ + RELGV+ LA + + Sbjct: 322 VIRQLDIRRPQVLVEGIIVEMSDSTARELGVQMLLAGGEGDTPLAMTRFSSNNPDLLALT 381 Query: 214 GQVTTLG---SDLSVATATTHV-----------GFNIGRINGRLLDLELSALEQKQQLDI 259 G T+ G SDL+V+ + GF +G L L L+A+E ++ Sbjct: 382 GAATSPGDDDSDLNVSLRDAAINSLLGASGGTLGFGGQNGSGNLFGLVLNAVESDVNSNV 441 Query: 260 IASPRLLASHLQPASIKQGSEIPYQVSSGESGAT-------SVEFKEAVLGMEVTPTVLQ 312 +A+P ++A + A G EIP V++GE+ + +V+ +E + + V P + + Sbjct: 442 LATPSIMALDNEEAYFLSGQEIP--VTTGEALGSNNTNPFRTVDREEVGVKLTVLPQITE 499 Query: 313 KGRIRLKLHISQ---NVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 +RL HI Q +V G V A L +K+EI T V +GE + LGG+ ++++ Sbjct: 500 GNTVRL--HIVQEVSSVAGAV--NAGSSDLITNKREISTTVLADNGEIIVLGGLIQQEDE 555 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 +D VP L +P G+LFR +G R L+VFI P ++ SE Sbjct: 556 ISEDGVPGLRRLPGVGRLFRSEGSTTRRTNLMVFIRPTIIRSE 598 >UniRef50_Q1LE58 Type II and III secretion system protein n=6 Tax=cellular organisms RepID=Q1LE58_RALME Length = 734 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/403 (23%), Positives = 176/403 (43%), Gaps = 43/403 (10%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 VTL D + V +AL+ LN++ DV L T A++ V L ++ Sbjct: 179 VTLQFRDANIRMVFEALSRTSGLNVIFDRDVRA--DLKTTIFVTNAAIEDAVDLILLQSQ 236 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 + +L+ +++ A+Q+ Q L+ R+ L D+ ++ + LL K Sbjct: 237 LDKKVLNANTLFIYPATPAKQQEYQE-------LKVRTFQLSNVDSKQVQSLLKSLLKIK 289 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW- 202 + VD+R N + +R + EQ +A DLP +V L ++ ++ + L +LG+ W Sbjct: 290 -EVVVDERANTVTIRGTPDTIRVAEQMIAAQDLPEPEVMLEVQVLEVSRERLTDLGIAWP 348 Query: 203 ---TLADAQHAGGVGQVTTL-GSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 T+A A G + L ++L V+ + F + + LL Sbjct: 349 NSFTMATPASATTWGVLHHLTANELEVSPLSATANFKLTDTDANLL-------------- 394 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAV------LGMEVTPTVLQ 312 ASPR+ + + A I G ++P SS + F + + + +EV P V + Sbjct: 395 --ASPRIRTRNKEKARILIGDKVPVISSSSTPSTSGPSFTQTIQYLDVGIKLEVEPQVYR 452 Query: 313 KGRIRLKLHISQNVPGQVLQQADGEV------LAIDKQEIETQVEVKSGETLALGGIFTR 366 + +KL + + + +Q + + I + T + ++ GET LGG+ + Sbjct: 453 DNDVGIKLALEVSNITKTIQSGNAQTGLSSLAYQIGTRSASTSLRLRDGETQILGGLISD 512 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ++++ D VP LG +P G+LF + + E+V+ ITP +V Sbjct: 513 QDRTSADKVPGLGQLPVVGRLFSDHNGDHVKTEIVLQITPHIV 555 >UniRef50_C1DRT4 General secretion pathway protein D n=2 Tax=Gammaproteobacteria RepID=C1DRT4_AZOVD Length = 752 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 135/302 (44%), Gaps = 24/302 (7%) Query: 120 RSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 RS+T A+A A +GS+ VD N ++ + + L + ++D PV Sbjct: 411 RSVTGTGANARASAPTSIAGNPEQGSVVVDANRNAIIYKGSGQEWLKLRPLLEELDRPVP 470 Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD---LSVATATTHVGFNI 236 V + + +N LGV W Q+ G +LGS A G NI Sbjct: 471 SVIIDVLLAEVNLNDREGLGVDW-----QNITG-----SLGSKQLIFGTANGIGSSGLNI 520 Query: 237 GRINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT-- 293 +N L+A Q I +SP+L+ + A+I+ G+EIP + +S T Sbjct: 521 SALNSAGQTKATLNAFYDNNQAVIRSSPKLMVRSGEEATIEVGNEIPVVTGTTQSTDTDN 580 Query: 294 -----SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAI-DKQEIE 347 +V++++ + + + PTV G + LK ISQ + + I + + +E Sbjct: 581 APITQTVQYRKTGVLLNIKPTVQASGVVDLK--ISQELSESTDTGTGDTLTPIINNRRVE 638 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 T + ++ G ++ L G+ + G + VPLLGD+PW G LF+ + R EL+V I P Sbjct: 639 TALTLRDGGSVMLAGLISSSKGKGDNGVPLLGDLPWIGNLFKSQSNSETRTELIVMIIPY 698 Query: 408 LV 409 +V Sbjct: 699 VV 700 >UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P6R4_AZOSE Length = 769 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 139/271 (51%), Gaps = 12/271 (4%) Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 D+ N LL+ + +E + ++DL QV + A I+ + G++W Sbjct: 454 DEFNNALLIYAPGSEYRKIEAALRRLDLSPTQVLIEASILEVTLSDETRFGLQWFFEG-- 511 Query: 209 HAGGVGQVTTLGSDLSVAT-ATTHVGFNIGRIN--GRLLDLELSALEQKQQLDIIASPRL 265 GG + + L +D + T T GF+ N G++ + L+A+ QK +++I+SP + Sbjct: 512 KLGGDYRGSGLFTDRASETLGRTVPGFSYSITNAAGQVRAV-LNAMAQKSLVNVISSPSV 570 Query: 266 LASHLQPASIKQGSEIPYQ----VSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLH 321 + A I G + P + V+ G + +TS+++K+ + ++VTP+ G + + + Sbjct: 571 MVLDNHTAVIHVGDQQPIRSTQTVTDGGTTSTSIQYKDTGVMLQVTPSANAGGMVAMDIK 630 Query: 322 ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDI 381 S G V A G+ + +++E+ ++V V++GET+ LGG+ + +G+ VP L DI Sbjct: 631 QSVTDVGAV-DDATGQ-RSFNQREVASKVAVRTGETVILGGLIRDSDTNGKTGVPWLHDI 688 Query: 382 PWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 P G LF R EL+V ITPR+V S+ Sbjct: 689 PVLGPLFGTTSDVTRRTELLVMITPRVVQSD 719 >UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobium loti RepID=Q988A3_RHILO Length = 708 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 17/276 (6%) Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVK 201 A ++ D N LL++ +EQ ++++D+ QV L A I + + G++ Sbjct: 401 AHATVVADVENNALLIQTTARDYQRIEQILSKVDVLPTQVMLEAVIAEVTLNDDLKYGLR 460 Query: 202 WTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIA 261 W ++ G VT + A A T GFN + + L+AL + +++I+ Sbjct: 461 WFF---ENGGTKVSVTDV---AKAAAAATLPGFNWSYATDNI-QVTLNALSKITDVNVIS 513 Query: 262 SPRLLASHLQPASIKQGSEIPYQV----SSGESGA---TSVEFKEAVLGMEVTPTVLQKG 314 +P ++A + Q A ++ G ++P +G A SV+ K+ + + VTP + G Sbjct: 514 APTIMALNNQKAILQVGDQVPILTQQSQDTGNGSAPIINSVQMKDTGVILTVTPRINNAG 573 Query: 315 RIRLKLHISQNVPGQV-LQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 R+ L I Q V +D + I +++++T+V V GE+LALGG+ + N + Sbjct: 574 RVML--DIQQEVSNVTKTDSSDIDSPTIQQRKVQTRVLVNDGESLALGGLIQQNNSVDRS 631 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VP+LGDIP G F+ R EL++FI P +V Sbjct: 632 QVPILGDIPILGNAFKQKDDTIRRTELIIFIRPHVV 667 >UniRef50_B9XM19 Type II and III secretion system protein n=1 Tax=bacterium Ellin514 RepID=B9XM19_9BACT Length = 785 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/298 (24%), Positives = 144/298 (48%), Gaps = 22/298 (7%) Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 + +GE + + D+RTN LL+ +K + ++ V ++D+ + QV + A I+ + Sbjct: 446 SSSGEFQILGNNKIIADERTNSLLVFASKQDMDVIKDIVGKLDVVLAQVLIEAIIMEVTL 505 Query: 193 KSLRELGVKW---TLADAQHAGGVGQV--------TTLGSDLSVATATTHVGFN-IGRIN 240 R+LGV + + + + G+G + + S + A + GF+ + + N Sbjct: 506 DDTRDLGVSYLQTSPSGNNYFQGIGAIKNGPFASFSNFASTATNAANSLPSGFSYLAQFN 565 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS---GESGATSVEF 297 ++A ++++++ PR+ SH A+++ G +PY + G +G S ++ Sbjct: 566 NDF-SATITAAATDNRINVLSRPRIQTSHAVTANLQIGDTVPYVTGTYFGGLNGQASSQY 624 Query: 298 KEAVLG--MEVTPTVLQKGRIRLKLHISQNVP--GQVLQQADGEVLAIDKQEIETQVEVK 353 ++ +G ++VTP + G + + I+Q+V G + V K+ + +V VK Sbjct: 625 QQTFVGINLQVTPLINPDGLV--VMDITQDVQQLGTPTIIDNNPVPTTTKRTAQAKVSVK 682 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +T+ LGG + + VPLL +IP G LFR ++R EL+V I P ++ + Sbjct: 683 DRDTIILGGFISSTKSRSKSGVPLLMNIPVLGYLFRSTSDSNKRTELIVLIRPTVLPT 740 >UniRef50_B4R9H7 Flp pilus assembly protein, secretin CpaC n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R9H7_PHEZH Length = 438 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 116/234 (49%), Gaps = 9/234 (3%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI 239 QV L ++ +L+++GV+ + + A G + + A +G + G Sbjct: 173 QVVLEVRVLEATRSALQDIGVEGAIGNNSWAVAFGN-----GLIGASPAAGALGISGGWG 227 Query: 240 NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKE 299 + R+ DL L+ALE+K + +A P L+A Q A+ G E PY V + S+EF++ Sbjct: 228 DTRI-DLMLTALEEKGVVRTLARPNLVAIPGQKATFHAGGEYPYPVPQRDD-LISLEFRK 285 Query: 300 AVLGMEVTPTVLQKGRIRLKLH--ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 + + TP V G IRL + +SQ L+ V + + T VE+K GE+ Sbjct: 286 YGVELTFTPVVQDNGLIRLDVEPEVSQLDFTNSLRVQGFTVPGLIVRRTHTTVELKPGES 345 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 LA+GG+F R+ + VP +GD+P G LFR + ELVV +TP+ S+ Sbjct: 346 LAIGGLFQREYTNALRQVPGIGDVPVLGSLFRSARWKKAETELVVIVTPKFAST 399 >UniRef50_A9HHL5 Type II and III secretion system protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HHL5_GLUDA Length = 473 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 24/246 (9%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLS---VATATTHVGFN- 235 QV L IV ++ +RELGV+W Q +G +G S A T FN Sbjct: 181 QVNLKVRIVEMSRSLVRELGVEW-----QSVNALGTAAAIGISTSNPLAALTTEQSAFNF 235 Query: 236 IGRIN--GRLLDLE--LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 + R + GR + +E + AL Q + +A P L Q AS G E P VSS + Sbjct: 236 LSRFSAAGRPVTVETVIDALSQDGLIHSLAEPNLTTVSGQAASFIVGGEYPIPVSS-YNN 294 Query: 292 ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVP-----GQV-LQQADG--EVLAIDK 343 +V++K+ + + PTVL GRI LH+ V G V L +A+G ++ A+ Sbjct: 295 NINVQYKQYGISLAFVPTVLADGRI--SLHVRPEVSALSTQGAVTLSEANGNLQIPALTV 352 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 + +T VE+ SG++ A+ G+ +P LGDIP G LF+ + ELV+ Sbjct: 353 RRADTTVELGSGQSFAIAGLMQDSTNMQGLGLPFLGDIPVLGALFKSSSFQKNESELVIV 412 Query: 404 ITPRLV 409 +TP LV Sbjct: 413 VTPYLV 418 >UniRef50_A1WFQ3 General secretion pathway protein D n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WFQ3_VEREI Length = 720 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 138/284 (48%), Gaps = 13/284 (4%) Query: 140 LSAKGSMTV--DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 ++A G++ V D+ N +L+ + + +E + ++DLP QV + A I+ + Sbjct: 407 VAALGNIRVMADELNNSVLVWSTRAEYAKIESTLRRLDLPPTQVLIEASIIEVTLNDDLR 466 Query: 198 LGVKWTLADAQHAGGVGQ---VTTLGSDLSVATATTHVGFNIG-RINGRLLDLELSALEQ 253 G++W D++ GQ + G+ GF+ + + L+ L Sbjct: 467 YGLQWAFNDSRSGIDRGQGALSSRDGTSTGGILGGALAGFSYALKSPAGAVRAMLNVLSA 526 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS-----GESGATSVEFKEAVLGMEVTP 308 K + ++ASP L+ ASI G + P Q + G +T++E+K+ + + VTP Sbjct: 527 KTTVKVVASPSLMVLDNHTASIAVGDQTPIQAGTTSNLEGTVTSTNIEYKDTGVNLVVTP 586 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 +V G I + + I Q+V + A ++++ ++V V+SGE++ +GG+ + Sbjct: 587 SV-NAGNI-VTMQIDQSVTDVGAKDEVTNQRAFLQRQLSSKVSVRSGESIVMGGLIQESS 644 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 S + +P+L +P FG LF + R EL+V ITPR+V S+ Sbjct: 645 SSTKSGIPVLHALPLFGNLFGTTVNDGRRTELLVIITPRVVRSD 688 >UniRef50_P03667 Virion export protein n=4 Tax=root RepID=G4P_BPIKE Length = 437 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 94/416 (22%), Positives = 181/416 (43%), Gaps = 50/416 (12%) Query: 28 VDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA-----LQTVVKSAGLIT 82 +++ PV +Q +++ +VV+PDV G +++ DV QA ++V+ + G + Sbjct: 35 LNNAPVRSFVQWYSQKSNKAVVVNPDVKGNITVFNADV--NQANIDDFFKSVLNANGFVL 92 Query: 83 RQEGNILSVHSIA------WQNNNIARQEAE----------QARAQANLPLENRSITLQY 126 G+ V + + N++ A+ A+ Q L L R+ L Sbjct: 93 -MAGDPSGVSTPSKLPSQQTDNDDDYEDSADYVPVGDSVPVSAQPQKPLDLTVRNFKLTR 151 Query: 127 ADAGELAKAGEKLLSAKGSMTVDKR--TNRLLLRDNKTALSALEQWVAQMDLPVGQVELS 184 + ++ + + + G V N LL+ + ++AL ++ +D+ QV + Sbjct: 152 VRSSDVLPLAKIFVDSNGGGDVIDYPGNNSLLVSGSAAIMNALADFITSIDVARDQVLIQ 211 Query: 185 AHIVTINEKSLRELGVKWTLADAQHAG----GVGQVTTLGSDLSVATATTHVGFNIGRIN 240 + + E SL GV + A +G G + LG+ LS A G + G N Sbjct: 212 SLMF---ETSLVN-GVDLSFAAGSASGDKVAGGFNTSALGTALSTA------GGSFGIFN 261 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS--SGESGAT----- 293 G +L L + A++ +I++PR+L Q I G +P+ +GE+ Sbjct: 262 GNVLALSIQAVKNDSNSKVISTPRILTQSGQTGYISVGQNVPFVTGKVTGEAANVNNPFQ 321 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 ++E ++ + ++VTP V+ G++ L + + + Q + +++ ++T V++K Sbjct: 322 TIERRDVGVSLKVTPVVMGNGQLVLTIDTKAD---SLTSQMTASDIITNQRHMQTTVQIK 378 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+TL LGG+ G SVP +P G LFR R + V +T ++ Sbjct: 379 DGQTLLLGGLIDSNTTDGNRSVPWFESVPVIGWLFRSHSDSHNERTMFVLLTAHVI 434 >UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Methylococcus capsulatus RepID=Q609V4_METCA Length = 751 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/278 (26%), Positives = 132/278 (47%), Gaps = 8/278 (2%) Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 L + D N L++ +E + +D+ QV + A IV I+ K+ + G Sbjct: 437 LGNNARVVADPANNALIVIAKPQDWKEIEAVIKALDVLPLQVLIDATIVEISLKNDLQYG 496 Query: 200 VKWTLADAQHAGGVGQ-VTTLGSDLSVATATTHVGFNIGRI-NGRLLDLELSALEQKQQL 257 +KW ++ +G + L D A+ GF+ I NG + + L+ L Q+ + Sbjct: 497 LKWLISSGSSTEALGSPLAALVKDFINGAASASGGFSYALIANGGNVKVLLNLLAQENLV 556 Query: 258 DIIASPRLLASHLQPASIKQGSEIPYQVSS------GESGATSVEFKEAVLGMEVTPTVL 311 ++I+SP L+ + Q A I G ++P + G + + +++ + +++ P V Sbjct: 557 NVISSPSLMVLNNQQAKINVGDQVPVLTGTTASATIGTTQFNQFQQQQSGVTLQIRPRVN 616 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 G + L++ + + P V + + +EI++ V V +G+TLALGG+ + K Sbjct: 617 SGGLVSLEIFQAISTPSPVEVGSGQKTFQFANREIQSVVAVPNGQTLALGGLISDKRSET 676 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 Q +P L IP G +F + ER ELVV ITPR+V Sbjct: 677 QTGLPYLNQIPMIGWMFGSTEIKPERTELVVLITPRVV 714 Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 27/172 (15%) Query: 20 KPQKVTLMVDDVPVAQVLQA-LAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTV 74 K K TL DD +++V + L + K+N V+SP V+G VSL LT+ L+T+ Sbjct: 50 KEGKYTLNFDDADLSEVTKVILGDTLKVNYVLSPKVTGKVSLQTTRPLTEDEMIPTLETL 109 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP----------LENRSITL 124 ++ G +EG + + A QA A+ P + R I L Sbjct: 110 LRMNGAALIREGGMYKIEPDA------------QAAISASGPGVGLGMMEPGYQLRVIPL 157 Query: 125 QYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 +Y A E+ K E ++ K + +D+ N +++ L + + V D+ Sbjct: 158 RYISAAEMQKVLEPIMPPKAVLRMDETRNLVMVAGTAEELGGVMEAVQIFDV 209 >UniRef50_C4KA69 Type II and III secretion system protein n=1 Tax=Thauera sp. MZ1T RepID=C4KA69_THASP Length = 479 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 81/264 (30%), Positives = 115/264 (43%), Gaps = 59/264 (22%) Query: 183 LSAHIVTINEKSLRELGVKWT-----------LADAQHAGGVGQVTT--LGS-DLS---- 224 V I+ LR+LG+ WT + D H G T LGS +LS Sbjct: 191 FDVRFVEISRSGLRDLGIDWTTQGKPLLGIGVIGDLYHDNRTGATVTRTLGSGELSSEVE 250 Query: 225 --------VATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK 276 A VG GR+N L QK I+ASPRL A + AS Sbjct: 251 IEANRVSPFAANVALVGSFFGRLN---------LLAQKGDAVILASPRLSARNRGEASFL 301 Query: 277 QGSEIPYQVSSGESGATSVEFKEAVLGMEV-TPTVLQKGRIRLKLHI----------SQN 325 G EIP V+S +G SV FKE + + + P G IR ++ +Q Sbjct: 302 AGGEIPVPVASA-TGTPSVTFKEYGIRLNILEPVADAAGTIRARIRTEVSSLDRSVAAQG 360 Query: 326 VPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFG 385 VPG + + ET+ +++GETL L G+ R+ +S ++++P LG++P G Sbjct: 361 VPGLL------------SRRTETEFNLRNGETLVLSGVLQREQQSDENALPHLGELPVIG 408 Query: 386 QLFRHDGKEDERRELVVFITPRLV 409 +LFR ELVVF+TP L+ Sbjct: 409 RLFRSTRFNSRESELVVFVTPWLL 432 >UniRef50_C6QEC9 Type II and III secretion system protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QEC9_9RHIZ Length = 550 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 35/225 (15%) Query: 210 AGGVGQVTTLGSDLSVATATTHVG----FNIGRINGRL---------------LDLELSA 250 A G+G + T G + A+A VG FN G G + + A Sbjct: 283 AQGLGSLPTFGVG-TAASAACAVGQICAFNPGPATGAFGNSGLVSGWGNSRNNIQSAVRA 341 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS-SGESGATSVEFKEAVLGMEVTPT 309 LE+ + +A P L A +PA G E+PY ++G ++V FK+ + + TP Sbjct: 342 LERDGLIKTLAEPNLTAISGEPAEFLAGGEVPYVTGVDTQTGVSAVAFKKFGVQLAFTPV 401 Query: 310 VLQKGRIRLKLH-----ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 VL +GRI LK+ ISQ V G + D ++ +T VE+ SG +LAL G+ Sbjct: 402 VLTEGRISLKIDTSVSDISQYVAGNPV---------FDTRQAKTVVELPSGGSLALAGLI 452 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + K + D +P DIP G LFR +++ ELVV +TP LV Sbjct: 453 STKTQQNIDGLPGAKDIPILGTLFRSRDFQNDESELVVIVTPYLV 497 >UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 Tax=Acinetobacter RepID=B2I1Y0_ACIBC Length = 758 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 141/295 (47%), Gaps = 34/295 (11%) Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL 204 S+ D N L+++ + + +E + Q+D+ QV + A I+ ++ +LG++W L Sbjct: 359 SIIADNAQNSLVVKADPQLMREIESAIQQLDVRRQQVLIEAAIIEVSGDDADQLGIQWAL 418 Query: 205 ADAQHAGGVGQVTTLGSDLSVATA----------TTHVGFNIGRINGRLLDLE------- 247 D G+ + +G+ LS A + + + NG L L Sbjct: 419 GDLSSGIGLLSFSNVGASLSSIAAGYLSGGSAGAASAIANGANKGNGATLGLGNFDNSRK 478 Query: 248 -----LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV------SSGESGATSVE 296 + AL+ + +++++P ++ + A I G +P+ S+G + T+VE Sbjct: 479 AYGALIQALKTNTKSNLLSTPSIVTMDNEEAYIVVGQNVPFVTGSVTTNSTGINPYTTVE 538 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV--LAIDKQEIETQVEVKS 354 K+ + ++V P + + G +RL+ + Q V +Q + G+ L K+ I+T V + Sbjct: 539 RKDVGVTLKVVPHIGEGGTVRLE--VEQEV--SAVQDSRGQAADLVTSKRAIKTAVLAEH 594 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+T+ LGG+ + + +P L IP+ G+LFR D + + +R L+VFI P +V Sbjct: 595 GQTVVLGGLVSDDTSLSRQGIPGLSSIPYVGRLFRSDNRSNVKRNLLVFIHPTIV 649 >UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V9I3_SPHWW Length = 682 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/275 (28%), Positives = 133/275 (48%), Gaps = 20/275 (7%) Query: 153 NRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADA---QH 209 N ++LR A++ +E +AQ+D+ QV + A IV I+ +L V+ + A + Sbjct: 363 NAIVLRGTPAAIAEVEPLIAQLDVRRPQVLIEAAIVEISGDQAEQLAVQLGIGAAAINRA 422 Query: 210 AGGVGQVTTLGSDL-SVATATTH-----VGFNIGRINGRLLD---LELSALEQKQQLDII 260 +GG T+ G L S+ TA V N G N R D + L A+ Q + +++ Sbjct: 423 SGGATSFTSPGLPLQSILTAIGSPAAGAVLSNGGSANIRFGDNFSILLQAIGQSTRSNLL 482 Query: 261 ASPRLLASHLQPASIKQGSEIPYQVSSGESGA------TSVEFKEAVLGMEVTPTVLQKG 314 ++P L +PA I G +P++ S + T++E ++ L + V P + Q Sbjct: 483 STPSLTTLDNEPAEIVVGQNVPFRTGSFSTDGNTINPFTTIERQDVGLTLRVVPRIHQGN 542 Query: 315 RIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDS 374 +RL+ ++Q V L +++ I+T V G+T+ LGG+ + + Sbjct: 543 VVRLE--VAQEVSSLTNAVTGAADLITNRRSIQTSVLADDGQTIVLGGLISDDRTQTRSQ 600 Query: 375 VPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VP+LGDIP G+LFR + +R L VF+ P ++ Sbjct: 601 VPILGDIPIAGELFRSRKESHVKRTLFVFLKPTIL 635 >UniRef50_C5SJV9 Type II and III secretion system protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SJV9_9CAUL Length = 482 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 114/248 (45%), Gaps = 30/248 (12%) Query: 180 QVELSAHIVTINEKSLRELG------------VKWTLADAQHAGGVGQVTTLGSDLSVAT 227 QV L IV + + S++++G V++ L +A G G+ LG Sbjct: 194 QVSLKVRIVEVQKSSIKQMGFNFNGLSGQTGEVQYALQNAPTYGTNGK--ALG------- 244 Query: 228 ATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS 287 G IG + +LL L A E+ + +A P L A + A G E P V+ Sbjct: 245 -----GMKIGYAD-KLLSASLQAFERVGLVRTLAEPNLAAVSGESAKFLAGGEFPVPVAK 298 Query: 288 GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKL--HISQNVPGQVLQQADGEVL-AIDKQ 344 G +VEFK +G+ TP VL G I LKL +S+ V D + + + Sbjct: 299 DTQGRVTVEFKTYGVGLGFTPVVLSNGTISLKLSTEVSEIVNTGSFSLDDTFTIPGLSVR 358 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 ET VE+ SG +L + G+ K K D++P + IP G LFR DE+ E+VV + Sbjct: 359 RAETTVELPSGGSLMIAGLLQSKYKQSIDALPGMTTIPVLGALFRSRDFLDEQTEMVVIV 418 Query: 405 TPRLVSSE 412 TP ++S++ Sbjct: 419 TPYIISAK 426 >UniRef50_Q5SII6 General secretion pathway protein (PilQ) n=5 Tax=Bacteria RepID=Q5SII6_THET8 Length = 757 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 142/307 (46%), Gaps = 31/307 (10%) Query: 116 PLENRSITLQYADAGELAKAGEKLLSAK----------------GSMTVDKRTNRLLLRD 159 P+ R+ L A A ELA+ ++ L A+ ++ D RTN L++ Sbjct: 453 PVFQRAYQLSNAKAVELAQVLQEALKARQAQNQGQQNQALPTREATVVADPRTNTLIVTG 512 Query: 160 NKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL 219 + L+ +E + ++D PV QV L I + R LG+KW AGG + L Sbjct: 513 TQEDLALVEGLIPKLDQPVPQVSLRVRIQEVQSNLTRSLGLKWN----SIAGGNVAASIL 568 Query: 220 GSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 S LS+ +T ++ +N + L AL+Q+ + + Q A ++ G Sbjct: 569 DSGLSLIFDSTR---SLAALN---IMATLDALQQQGLSRALRDVNQTVLNNQTARLQSG- 621 Query: 280 EIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA-DGEV 338 E + V F ++ +EVTP + G+I L +I + G V + DG+V Sbjct: 622 ETFFIRRVVNDQVERVPFDVGLI-VEVTPQITADGQILL--NIKAEISGNVQRNPVDGDV 678 Query: 339 LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR 398 KQ + T + VK GET+ LGG+ ++++ Q VPLL DIP G+LF+ E + Sbjct: 679 DRFTKQVVTTTLRVKDGETVVLGGLTSQESNQSQQGVPLLMDIPLIGELFKQRTNESTDK 738 Query: 399 ELVVFIT 405 EL+V IT Sbjct: 739 ELLVVIT 745 >UniRef50_A1WEI0 Type II and III secretion system protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEI0_VEREI Length = 714 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 18/246 (7%) Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGV----GQVTTLGSDLSVATATTHV---- 232 V + +V LRELG++W GG+ +V G + V + Sbjct: 221 VLMDVKVVEFPVNELRELGLRWAAKGGASIGGIWSPIRRVHQDGLRIDVESPPITAADGD 280 Query: 233 ------GFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 G NI L +L L + + I+A P+L A + A G E PY V+ Sbjct: 281 LIPLPKGLNILSALNMGLGAKLDLLASQGKASILAQPQLSARNGAKAEFLAGGEYPY-VA 339 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 S +G T V FK + +++TP V + G IR ++ + + A G L++ + Sbjct: 340 SSINGPT-VMFKPYGIRLKITPRVDRNGVIRAEIDSEVSNIDPSISTAAGPALSV--RRT 396 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 T+ V++GET+ L G+ +RK D VP LGD+P G LFR +++ ELVVF+TP Sbjct: 397 FTEFNVQNGETMVLSGLMSRKTSQNIDKVPFLGDLPVLGALFRSKRFQNDETELVVFVTP 456 Query: 407 RLVSSE 412 +++S+ Sbjct: 457 TVINSQ 462 >UniRef50_A8FXQ1 Type II secretory pathway component PulD-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FXQ1_SHESH Length = 696 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 28/278 (10%) Query: 143 KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW 202 K ++ VD R+N L+ + T ++ V +MD+ QV LS I + + G ++ Sbjct: 413 KMTLVVDARSNSLIFHASGTEYQSILPLVQRMDILPKQVLLSVTIAEVKLTGEFKRGFEF 472 Query: 203 TLADAQHAG----GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 L+ +G G+G +G S + + IG+ +E+ Q++ Sbjct: 473 ALSSGNFSGSTKGGLGLDEIVGGTFSWKSGANEI---IGKF-----------VEENSQVN 518 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSG-----ESGATSVEFKEAVLGMEVTPTVLQK 313 I++ P LL A+I G +IP S E ++ ++E + + VTPTV + Sbjct: 519 ILSKPSLLVRDGTEANINVGDKIPVSSGSSSSGSGEVVTENITYRETGIKLTVTPTVNAQ 578 Query: 314 GRIRLKLH--ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 G + ++++ IS V G V + + + I+T+V +G+T+ LGG+ + + Sbjct: 579 GVVIMEINQEISNQVVGPVGKGGNPTFF---DRSIKTEVVADTGQTILLGGLISDDTTNS 635 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VP L IP G LF D K + + ELV+ +TP++V Sbjct: 636 NKGVPYLKSIPLIGALFESDSKNNTKTELVIMVTPKIV 673 >UniRef50_Q0C324 Type II/III secretion system protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C324_HYPNA Length = 432 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 10/232 (4%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI 239 QV L + + K++RE+G T+ A V T G+ + T V N+G Sbjct: 169 QVMLEVRFLEASRKAVREIGFGNTI----DANDVVAGTEGGTVSGLLEKTLAVFTNVG-- 222 Query: 240 NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKE 299 G +D+ L ALE+K + +A P L+A AS G E P VSS ++ T VEFK+ Sbjct: 223 -GENIDVSLRALEEKGVIRTLAEPNLVALSGDTASFLAGGEFPIPVSSRDNEVT-VEFKK 280 Query: 300 AVLGMEVTPTVLQKG--RIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 + ++ TPTVL G +R++ +S G ++ ++ ++ + + +T VE+ G+ Sbjct: 281 FGVSLDFTPTVLGDGLVNLRVRPEVSALDRGNGIRASNIDIPGVSVRRADTTVELHDGQA 340 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 A+ G+ + P LG++P G LF + ELV+ +TPRLV Sbjct: 341 FAIAGLLQNNYTNDVRQTPWLGNVPILGSLFSSKRYQRNETELVIIVTPRLV 392 >UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Marinomonas sp. MED121 RepID=A3YCA1_9GAMM Length = 616 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 83/323 (25%), Positives = 144/323 (44%), Gaps = 31/323 (9%) Query: 114 NLPLENRS----ITLQYADA-----------GELAKAGEKLLSAKGSMTVDKRTNRLLLR 158 ++P E S I LQYADA G++ K + + ++ D+ N LL+ Sbjct: 255 DIPAEKTSRLQYIPLQYADATKVADLLKGVVGDIEKKEGNAPTLETNIQADEDLNALLVN 314 Query: 159 DNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW-------TLADAQHAG 211 +S + + Q+D+P QV + A IV I ELGV+W ++ Sbjct: 315 SEPGVMSEIYSVLKQIDVPRAQVLIEAVIVEITVTDEEELGVQWLIGGSDEIISGTNFTS 374 Query: 212 GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQ 271 T+ S ++ +TA T + + AL+ K +++++P++L Q Sbjct: 375 AGSSANTIASSINSSTANTLATGGTAILGDTNFGAIIQALQSKTNSNLLSTPKILTLDNQ 434 Query: 272 PASIKQGSEIPYQVS--SGESGATSVEFKEAVLGM--EVTPTVLQKGRIRLKLHISQNVP 327 A I G P+Q S +S +T V +G+ +VTP + + K+ + Q V Sbjct: 435 EARILVGETRPFQTGEYSEDSDSTFVTTSREDVGLTLKVTPHINSGNEV--KMEVFQTVE 492 Query: 328 GQVLQQAD-GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQ 386 + +D G + + +E+ET V +T+ LGG+ + VP LGD+P+ G Sbjct: 493 SASDEASDLGTITTV--REVETVVIAGDRQTIVLGGLIQDNITESKQKVPFLGDLPFVGG 550 Query: 387 LFRHDGKEDERRELVVFITPRLV 409 LFR +++ L+VFI P ++ Sbjct: 551 LFRSSSFSIDKKNLLVFIRPTII 573 >UniRef50_A3QAL9 Type II and III secretion system protein n=3 Tax=Shewanella RepID=A3QAL9_SHELP Length = 436 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 23/247 (9%) Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATA-------TTHVG 233 V++ IV N+ +L +G+KW + A A GV + T +VA+ T + Sbjct: 164 VKMQVKIVEFNKSTLNNVGIKWETSMAGPAYGVAKGFTANPIFNVASPGQYTEAITKSIT 223 Query: 234 FNIGRINGRL---------LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ 284 NIG ++ R + ++ L +K ++A P L + AS G E P + Sbjct: 224 ENIGVLDTRGWSSLGIVSGIGSQIQLLSEKGDARLLAQPNLTTRSGESASFLAGGEFPIR 283 Query: 285 VSSGESGATSVEFKEAVLGMEVTPTVLQKGRI--RLKLHISQNVPGQVLQQADGEVLAID 342 SG GA VE+KE + +++ P V ++ I R+ +S P + G + Sbjct: 284 SVSG-LGAVDVEYKEYGIKLDIEPVVDEQQNIVSRVMAEVSSIDPSVAVDGVPGML---- 338 Query: 343 KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 402 + E+ + VK+ ET+ + G+ + + PLLGDIP G+LF+ +D++ ELV+ Sbjct: 339 TRRTESVINVKNNETIVISGLVNSEMSKIVNKFPLLGDIPILGELFKSRDFKDDKTELVI 398 Query: 403 FITPRLV 409 F+TP +V Sbjct: 399 FVTPVVV 405 >UniRef50_A4A2S6 Putative outer membrane channel for pilus assembly CpaC n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2S6_9PLAN Length = 534 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 71/243 (29%), Positives = 114/243 (46%), Gaps = 14/243 (5%) Query: 178 VGQVELSAHIVTINEKSLRELGVKWTLADAQH-----AGGV----GQVTTLGSDLSVATA 228 V QV L + ++ LR LG+ W + + A V G +T+ D AT Sbjct: 169 VQQVMLKVKVYEVSRTKLRRLGIDWAAIGSDYFISSTAANVLTPAGVLTSGARDALGATG 228 Query: 229 TTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 T V F + + + L AL Q + A P L +PAS G E+P QV+SG Sbjct: 229 QT-VQFGVLGSSTQFFGF-LDALRQNNVAKLSAEPTLTTISGRPASFLSGGEVPIQVASG 286 Query: 289 ESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 G TS+E+K+ ++ P VL G ++L++ + P + A + ++T Sbjct: 287 -LGTTSIEYKQYGTRVDFVPIVLGNGNLKLEVRPEVSEPDYSV--AINGTPGFRLRWVDT 343 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 VE+K+G++ AL G+ K ++ +P L D+PW G FR + EL++ +TP L Sbjct: 344 AVEMKAGQSFALAGLIQEKIETETRGLPYLADLPWVGAAFRRNTDSRNEVELLIIVTPEL 403 Query: 409 VSS 411 V + Sbjct: 404 VGA 406 >UniRef50_Q2KYI4 Putative pilus assembly protein n=1 Tax=Bordetella avium 197N RepID=Q2KYI4_BORA1 Length = 426 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 96/344 (27%), Positives = 153/344 (44%), Gaps = 54/344 (15%) Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 L R+EG + SVH W+ + R A + + A G + E+L Sbjct: 71 LFARKEG-VSSVH--VWRGQSGVRAYA---------------LRVMPAGFGHIRAEVEQL 112 Query: 140 LSAKGSMTVDKRTNRLLLR------DNKTALSALEQWVAQ-MDLP--VG---QVELSAHI 187 L+A ++ + + L++ +K +SAL Q + +DL VG V L + Sbjct: 113 LAAMPALRLSVVGHHLVIEGSGLPDHDKQRISALAQRYPEVLDLTGDVGWEQMVLLDVQV 172 Query: 188 VTINEKSLRELGVKWTL-ADAQHAGGVGQVTTLGSDLSVATATTHVG-FNIGRINGRLLD 245 V + L ELG+ W++ A+ H +H G + + +G + Sbjct: 173 VELPRARLTELGMHWSMGAEGSH-----------------PVRSHAGVWGSLQWSGAAIG 215 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGME 305 L AL Q+ + +A PRLLA AS G E+PY+ ES A++V FK + ++ Sbjct: 216 ARLQALAQRGEAVFLARPRLLARSGSAASFLAGGEVPYR--GAESEASTV-FKPYGVSLK 272 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 +TP + +G IR + + + L G A+ + ET+ V SG+TL LGG Sbjct: 273 ITPRIDPRGTIRSHIEVESSSIDPTLTVPAGP--AMRTRRAETEFNVPSGQTLVLGGFLG 330 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 R+ S VP L DIP G LF +++ EL +F+TP +V Sbjct: 331 RELSSETRGVPWLSDIPVLGLLFGERRQQNRDTELAIFVTPTIV 374 >UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burkholderiales RepID=B1Y329_LEPCP Length = 753 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 82/298 (27%), Positives = 130/298 (43%), Gaps = 28/298 (9%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S G + D TN L++ + L + Q+D QV + + IV ++ E G Sbjct: 370 STGGFIQADPATNSLIISAPEPVYRQLRGVIDQLDARRAQVYVESMIVKMDATQAAEFGF 429 Query: 201 KWTLADAQHAGGVGQV--TTLGS------DLSVATAT----THVGFNIG---RING-RLL 244 +W Q G V T G+ +LSV AT G N+G ING L Sbjct: 430 QWQGLLGQSGDRYGLVAGTNFGTGGNNIVNLSVGAATGAALPGAGLNVGLLKAINGVYTL 489 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS---------V 295 LE +++++P L+A + A I G +P+ S + TS + Sbjct: 490 GALARFLESNTGANVLSTPNLIALDNEEAKIVIGQNVPFVTGSFTNTGTSNGSANPFQTI 549 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHI-SQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 E K+ L + V P + + G +R+ ++ + +V + G DK IET V V Sbjct: 550 ERKDVGLTLRVKPQIGEGGTVRMVIYQENSSVVANTTTNSAGPT--TDKSAIETTVVVDD 607 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G + LGG+ SG+D VP L IP G LFR + ++ + L+VF+ P ++ S+ Sbjct: 608 GSIMVLGGLLKDDYGSGEDRVPGLASIPLIGGLFRSENRKRTKSNLLVFLRPVVMRSQ 665 >UniRef50_Q1GYK8 Type II and III secretion system protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK8_METFK Length = 657 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 92/407 (22%), Positives = 180/407 (44%), Gaps = 39/407 (9%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQAL 71 P ++ A + V+L + D + V +AL+ +N ++ D+ ++ + P +A+ Sbjct: 173 PKLKPAFNKPVSLELRDANIKMVFEALSRATGINFILDKDIKPETKATVFIKKSPVDEAI 232 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 + V+ + GL + +LS ++ N A+ + Q L R+ L A A + Sbjct: 233 EMVLATNGL----QKKVLSENTALVFPNTAAKLKDYQD-------LVIRNFYLTNAKAKD 281 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 ++ + +L K T D+R N +++RD + E+ VA DL +V L ++ ++ Sbjct: 282 VSTMIKTMLKTKDVHT-DERLNMIVIRDTPEVVRIAEKLVAANDLADPEVMLEIEVMEVS 340 Query: 192 EKSLRELGVKWTLADAQHAG---GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL 248 + L+ELG+ + + AG + G+ L + T + G IN Sbjct: 341 RERLQELGIDYPTSLTASAGLSIDAMRSNNSGTYLFNSNPTLNFRKTTGDIN-------- 392 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGME 305 I+A+PR+ + A + G ++P + +G + SV++ + L +E Sbjct: 393 ----------ILANPRIRVRNNDKAQVLVGDKVPVITTVATAGVGSSQSVQYLDVGLKLE 442 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQ-QADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 P + + +K+ + + G G V I + T + +K GET L G+ Sbjct: 443 AEPRITLDDFVNIKIALEVSSLGSSTTLNGGGVVYQIGTRNASTLLRLKDGETQILAGLI 502 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + +P LGDIP G+LF + ++ E+V+ ITP +V++ Sbjct: 503 NDEERRNTSRLPGLGDIPLLGRLFSNQTDNRKKTEIVLAITPHVVNN 549 >UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pseudomonas RepID=GSPD_PSEAE Length = 658 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 27/282 (9%) Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 D+ TN L+L + ++ALE V Q+D+P QV + A IV I+ +GV+W + Sbjct: 329 DESTNALVLLADPDTVNALEDIVRQLDVPRAQVLVEAAIVEISGDIQDAVGVQWAI---- 384 Query: 209 HAGGVGQVTT--LGSDLSVATATTHVGFN----------IGRINGRLLDLELSALEQKQQ 256 + GG+G T + LS+ T + N I I ++AL + Sbjct: 385 NKGGMGGTKTNFANTGLSIGTLLQSLESNKAPESIPDGAIVGIGSSSFGALVTALSANTK 444 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKEAVLGMEVTPT 309 +++++P LL Q A I G +P+Q S + + T+VE K+ + ++VTP Sbjct: 445 SNLLSTPSLLTLDNQKAEILVGQNVPFQTGSYTTNSEGSSNPFTTVERKDIGVSLKVTPH 504 Query: 310 VLQKGRIRLKLH--ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 + +RL++ IS +P QQ + L K+ I++ + ++G+ + +GG+ Sbjct: 505 INDGAALRLEIEQEISALLPNA--QQRNNTDLITSKRSIKSTILAENGQVIVIGGLIQDD 562 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + VPLLGDIP G+LFR +R L+VF+ P +V Sbjct: 563 VSQAESKVPLLGDIPLLGRLFRSTKDTHTKRNLMVFLRPTVV 604 >UniRef50_A9BV48 Type II and III secretion system protein n=3 Tax=Burkholderiales RepID=A9BV48_DELAS Length = 492 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 13/170 (7%) Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEV 306 +LS LE ++A P LLA Q AS G E+P V + G ++++KE + +++ Sbjct: 283 QLSILEGNGMARVLARPTLLAQTGQNASFLAGGELPIPVPA-RDGNIAIQYKEFGIKLQL 341 Query: 307 TPTVLQKGRIRLK-------LHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 TPT+L RI LK L + V + V AI + +T VE+ GE+ Sbjct: 342 TPTILSDDRIALKVSPEASDLDFNSGV-----TISGVTVPAIRTRRADTSVELADGESFV 396 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +GG+ +R S VP+LGD+P G F++ E ELV+ +TPRLV Sbjct: 397 IGGLVSRATTSNVSKVPVLGDLPILGTFFKNLNYTQEESELVIIVTPRLV 446 >UniRef50_D0XKD9 General secretion pathway protein D n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XKD9_9CAUL Length = 688 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 24/280 (8%) Query: 153 NRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGG 212 N +++R + L+ ++Q+DL QV++ IV I + ++GV+ L A G Sbjct: 369 NAVVMRGPPATVEMLQDLISQLDLRRAQVKIEVAIVEITGELGEQIGVQLGLGGAVPDDG 428 Query: 213 VGQVTTL---GSDLSVATATTHVGFNIGRINGRLLDLE----------LSALEQKQQLDI 259 V T+ GSDL T + +G+ GR+ G+ L L L AL ++ Sbjct: 429 VIGGTSFSNGGSDL--GTVLSALGYPAGRLLGQGLSLAAGSEGEFGLLLQALGTNSAANL 486 Query: 260 IASPRLLASHLQPASIKQGSEIPYQVSSGESGA------TSVEFKEAVLGMEVTPTVLQK 313 ++SP + QPA I G +P++ S + T++ ++ L + V P V + Sbjct: 487 LSSPSVTVLDNQPAEIVVGQNVPFRTGSFATDGNSTNPFTTISREDVGLTLRVIPRV-HE 545 Query: 314 GRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQ 372 G + +KL +SQ V V G L +++ I+T V GET+ LGG+ T S Sbjct: 546 GDV-VKLDVSQEVSSLVTTNITGAADLITNRRSIQTSVLANDGETIVLGGLVTDDRMSNN 604 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 VP L +P G FR RR L +F+ P ++ ++ Sbjct: 605 SRVPGLSSLPVVGNAFRSRRDSQTRRTLFIFLKPTILRTD 644 Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 121 SITLQYADAGELAKAGEKLLSAKGS---MTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 SI L+YA+AGE+A + LL + +T D+R+N LL+R + L+ VA +D P Sbjct: 207 SIALRYANAGEVATSVGALLGSDAGGPRVTADERSNVLLIRGDAADLAQARSIVAALDTP 266 Query: 178 VGQVELS 184 G ++ Sbjct: 267 GGATPVT 273 >UniRef50_A1HPR1 Type II and III secretion system protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPR1_9FIRM Length = 408 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 18/238 (7%) Query: 180 QVELSAHIVTINEKSLRELGVKW-TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGR 238 QV++ A ++ IN + ++ELG+KW AD GQ + + VG G Sbjct: 158 QVKIEAKVIEINRQKIKELGIKWGNSADTPGTFIFGQ----------SALNSKVGDVFGD 207 Query: 239 INGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 + G ++ +LSAL + +++ P ++ ASI G +IP V+ ++ ++E+ Sbjct: 208 LGGYADINAQLSALVKSGAAKVLSQPNVVTLSGDKASIMIGGQIPVPVAQ-DNNKITIEW 266 Query: 298 KEAVLGMEVTPTVLQKGRI--RLKLHISQ---NVPGQVLQQADGEVLAIDKQEIETQVEV 352 K+ + +++ P V G I R+K +S N + A E+ + ++ ET + + Sbjct: 267 KDYGIKLDIAPEVNGDGLIQSRVKAEVSSLDYNSANSIKLGAGMEIPPVRLRKAETAIAL 326 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 SG+T+A+GG+ + VP+LGD+P G LFR EL+V ITP LV+ Sbjct: 327 SSGQTMAIGGLIATETSKDVVKVPMLGDLPVLGHLFRSTSFRRGETELLVLITPSLVN 384 >UniRef50_C9KLT4 Putative type II/III secretion system protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLT4_9FIRM Length = 548 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 36/298 (12%) Query: 142 AKGSMTVDKRT-NRLLLRDN------KTALSALEQWVAQMDLP-VGQVELSAHIVTINEK 193 +K SMT D R N+ + D+ T+ S + V +++ Q+ + A V + Sbjct: 168 SKSSMTPDGRYENKTVTNDSYQRTPRDTSGSTGDSVVNLLEMTNPDQINIEAMFVELGTS 227 Query: 194 SLRELGVKWTLADAQHAGGVG-QVTTLGSDLSVATATTHVGFNIGR--------INGRLL 244 + LG+ + D G ++ +G T + G + GR N L Sbjct: 228 DAKNLGINYASQDMSDTDSSGIKMNDVG--------TYYAGESYGRQRSGGNHWYNSNWL 279 Query: 245 -------DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 + E+ AL + + +I+ P + + ASI G E+PYQ S+G G+T+ + Sbjct: 280 FTHFSKINAEIHALIENGKARVISRPNVTTMSGKNASILIGGEVPYQESNG-FGSTTTSY 338 Query: 298 KEAVLGMEV-TPTVLQKGRI--RLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 K +G+++ PTV Q G I L+ +S+ + + + I + T V + S Sbjct: 339 KTYGIGIQLWKPTVDQDGNITTELETQVSRLDWNNAVTKDGYRMPGIATRSAYTTVNIPS 398 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G T+ +GG+ + + VPLLG+IP G+LF++ K ++ E+VV ITPR+VS E Sbjct: 399 GMTMVIGGLLNSNDANTIQKVPLLGNIPILGELFKYHNKSRQKTEIVVLITPRVVSEE 456 >UniRef50_C8PXJ4 General secretion pathway protein D n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PXJ4_9GAMM Length = 813 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 33/294 (11%) Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL 204 S+ D+ N +++ N + +E + ++D QV + A I+ I+ ++LGV+W + Sbjct: 374 SIIADQTQNSVIVNANPELMVEIENAINELDTRRDQVLIQAAIMEISGNDTQQLGVQWAM 433 Query: 205 ADAQHAGGVGQVTTLGSDL-----------------SVATATTHVGFNIGRINGR--LLD 245 +A GV +G+ SVA A +G + NG Sbjct: 434 GNANSGVGVINFNNIGASAVGLASEILSKTPGTAAASVAGALLGIGTSKTDSNGNREFYG 493 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS-------VEFK 298 L A+ + ++++ P +L + A+I G +P+ S + + S V + Sbjct: 494 AILQAINKTNNANLLSMPSILTLDNEKANILVGQNVPFVTGSYTTASNSSTTPFQTVSRQ 553 Query: 299 EAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV---LQQADGEVLAIDKQEIETQVEVKSG 355 + + + V P + G +RL+ ISQ V V L G V +K I+T + Sbjct: 554 DVGINLNVIPHIGDNGSVRLE--ISQEVSSIVDGTLNNVSGVV--TNKNLIKTTILADDQ 609 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +T+ALGG+ + GQ VP LGD P G LFR K ++ L+VF+ P ++ Sbjct: 610 QTVALGGLMRDNSTYGQQKVPGLGDAPILGNLFRSKSKNSDKTNLIVFLQPTIL 663 >UniRef50_A5FVS3 Type II and III secretion system protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FVS3_ACICJ Length = 491 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 79/247 (31%), Positives = 113/247 (45%), Gaps = 25/247 (10%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGG---VGQVTTLGSDLSV----ATATTHV 232 QV L I ++ ++LG+ W Q AG VG+ S L V + AT Sbjct: 204 QVALKVRIAQMSRTITQQLGINW-----QSAGNGISVGKFLFGFSALDVLNGSSPATPAA 258 Query: 233 G-FNIG-RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES 290 G +N G + G +D L AL I+A P L A Q AS G P V G++ Sbjct: 259 GSYNAGLSVGGGAIDSVLDALNSDNLAHILAEPTLTALSGQSASFIDGGSFPVPVP-GQN 317 Query: 291 GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA-----DGE---VLAID 342 G +V++K+ + ++ P VL G I LH+ V Q A G V ++ Sbjct: 318 GQVTVQYKKFGVQLKFRPVVLDNGSI--ILHVQPTVSSPTTQNAFQIAVAGTSIVVPSLS 375 Query: 343 KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 402 Q T V + SG+TLA+ G+ + + SVP LGD+P G FR D + +ELV+ Sbjct: 376 TQSASTTVVIGSGQTLAIAGLLSNSSNQTDKSVPGLGDMPVLGAAFRDDNYNRQEQELVI 435 Query: 403 FITPRLV 409 +TP LV Sbjct: 436 LVTPYLV 442 >UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF18_CELJU Length = 681 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 59/348 (16%) Query: 120 RSITLQYADAGELAKAGEKLLS-------AKGS--------MTVDKRTNRLLLRDNKTAL 164 R + L+YA A ++AK ++ A+G+ + D TN +LL + + Sbjct: 278 RVVYLRYAKAEDVAKVLTGMMQSFTQSRQAEGAAPNTQQPGVQADPATNSVLLTADVDTM 337 Query: 165 SALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVG---------- 214 + V +D+ QV + A I ++++ +ELG++W D ++ G Sbjct: 338 DTMLSIVDSLDIRRAQVLVEAIIAEVSDEDGKELGIEWMYRDDKYGFGASANGSRGSIGG 397 Query: 215 -----------------QVTTLGSDLSVATATTHVGFNIGRINGRLLDLE-LSALEQKQQ 256 + T L + S + + F GR+ R L L ++ + Sbjct: 398 IGSAVLAASDKNASQDDKDTALANLASGLSGLSGQMFGFGRLGERTDFLAVLKLMQSSSK 457 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQVSS----GESGA-------TSVEFKEAVLGME 305 +I+++P LL + A I G ++P++ S G G T++ ++ L +E Sbjct: 458 TNILSTPSLLTTDNNQAVISVGRQVPFRTGSYSAVGTGGNSTIGSPFTTINREDVGLKLE 517 Query: 306 VTPTVLQKGRIRLKLHISQNVPG-QVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 VTP + + I L I Q V + DG + +K+EI+TQ+ GET+ LGG+ Sbjct: 518 VTPHINEGDSI--VLDIKQEVSSLSDVSSEDG--IITNKREIQTQILSSDGETIVLGGLI 573 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 T + ++G+ VP+LG IP GQLFR + L+VFI +V + Sbjct: 574 TDEVQTGERRVPVLGSIPVLGQLFRSQTSSKSKTNLLVFIRATVVRDD 621 >UniRef50_C4XKD6 Bacterial type II and III secretion system protein family protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKD6_DESMR Length = 528 Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 10/199 (5%) Query: 215 QVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 Q T+G LS TA N G + L L+Q + I+A P L+ + Q A Sbjct: 267 QSKTVG--LSQGTAAMRFSTNWGGAGNTTMTAVLDLLKQNGLVKILAEPNLVCLNGQSAK 324 Query: 275 IKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG----QV 330 G EIP V SG G TS+E+KE +G++ TPTV G + + L ++ V + Sbjct: 325 FLAGGEIPVPVPSG-LGTTSIEWKEFGVGLKFTPTV--AGEV-ISLQVNPEVSDLDYTRA 380 Query: 331 LQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRH 390 ++ E+ A+ + T VE+K+G+T A+ G+ + + D P +GDIP G LF+ Sbjct: 381 IKLDSFEIPAVLTRRASTSVELKNGQTFAIAGLLKEEGRESVDKYPWIGDIPVLGNLFKS 440 Query: 391 DGKEDERRELVVFITPRLV 409 + ++ ELV+ IT LV Sbjct: 441 SSYQKDQSELVILITAHLV 459 >UniRef50_A0LPH6 General secretion pathway protein D n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPH6_SYNFM Length = 793 Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 134/277 (48%), Gaps = 16/277 (5%) Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 D+ N +++R N T + +++ + +D+ V + I + E G+KW + A+ Sbjct: 491 DEVNNAIVVRANATDYAKIKKTIEALDILPRAVLIEVIIAEVALTKDFEYGLKWYFSHAE 550 Query: 209 HAGGVGQVTTLG----SD--LSVATATTHVGFNIGRI-NGRLLDLELSALEQKQQLDIIA 261 GVGQ + G SD L++A ++ G + + N + + LS L K ++ I++ Sbjct: 551 VGAGVGQGSLNGLGGVSDIALNLAGISSAGGMALAWVSNAKDMAGVLSWLSSKTKVKILS 610 Query: 262 SPRLLASHLQPASIKQGSEIPYQVSSGESGATS--------VEFKEAVLGMEVTPTVLQK 313 +P LLA+ + A+I+ G P S G ++ +E++E + VTP + Sbjct: 611 TPTLLATDNKEAAIQVGGRTPVPSGSYTGGTSTTLDTVFSTIEYEETGTILTVTPHINAG 670 Query: 314 GRIRLKLHIS-QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQ 372 G +RL++ + + V + ++ ++T + + G T+ +GGI ++ Sbjct: 671 GLVRLEVEQTIRRVGANATVGVNNTAPTFTERNLKTTLLAQDGSTVVIGGIIDEIDRDTT 730 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 P+L D+P G LF GK ER EL++ ITPR+V Sbjct: 731 TGAPMLVDVPIIGPLFGQKGKSRERTELLIAITPRVV 767 >UniRef50_Q52498 Hypersensitivity response secretion protein hrpA n=6 Tax=Ralstonia solanacearum RepID=HRPA_RALSO Length = 568 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 138/305 (45%), Gaps = 51/305 (16%) Query: 140 LSAKGSMTV---DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 L +GS + D R+N +L+RD ++A + + +D +E+SA I+ I+E +L Sbjct: 280 LDDRGSTPIIRADPRSNSVLVRDRADRMAAHQSLIESLDSRPAVLEISASIIDISENALE 339 Query: 197 ELGVKWTLADAQH--AGGVGQVTTLGSDLSVATATTHVGFNIGR------------ING- 241 +LGV W L +++ G G T L + S+ + T G I G Sbjct: 340 QLGVDWRLHNSRFDLQTGNGTNTMLNNPGSLDSVATTAGAAAAIAATPAGGVLSAVIGGG 399 Query: 242 -RLLDLELSALEQKQQLDIIASPRLLA------------SHLQPASIKQGSEIPYQVSSG 288 R L +SAL+Q Q I A+P++ + P + Q +++ Y +S+G Sbjct: 400 SRYLMARISALQQTDQARITANPKVATLDNTEAVMDNRQNFYVPVAGYQSADL-YAISAG 458 Query: 289 ESGATSVEFKEAVLGMEVTPTVLQKG---RIRLKLHISQNVPGQVLQQADGEVLAIDKQE 345 S + V P V+ G RIR+ +HI GQ+ Q G + + E Sbjct: 459 VS-------------LRVLPMVVMDGGTVRIRMNVHIED---GQITSQQVGNLPITSQSE 502 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 I+TQ + G++L + G + D+VP L IP G LFR D +R + + +T Sbjct: 503 IDTQALINEGDSLLIAGYSVEQQSKSVDAVPGLSKIPLVGALFRTDQTTGKRFQRMFLVT 562 Query: 406 PRLVS 410 PR+++ Sbjct: 563 PRVIT 567 >UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1Q9C2_PSYCK Length = 750 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 129/295 (43%), Gaps = 33/295 (11%) Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL 204 S+ D+ N +++ + +E V Q+D QV + A IV ++ +LGV+W L Sbjct: 370 SIIADETQNAVIVNAAPELMFEIEDAVNQLDSRRSQVLIQAAIVEVSGDDATQLGVQWAL 429 Query: 205 ADAQHAGGVGQVTTLGSDLSVATATTHVG---------------FNIG------RINGRL 243 +A GV +G+ A G IG + N + Sbjct: 430 GNANSGYGVVNFNNVGASAVSLAAAALSGGTGISAAAGSIAGALLGIGSSSKDSKGNAQF 489 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS-------VE 296 L AL+ ++++ P +L + ASI G +P+ S +G+ S ++ Sbjct: 490 YGAILQALDSSTSANLLSMPSILTLDNEKASILVGQNVPFVTGSYTTGSDSSTNPFQTID 549 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKL--HISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 ++ + + V P + G +RL++ +S VPG + L +K I T + Sbjct: 550 RQDIGINLNVIPHIGANGTVRLEVSQEVSSVVPGSA---GNASGLITNKSLINTTILADD 606 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +T+ALGG+ + + Q VP LG++P G+LFR D ++ L++F+ P ++ Sbjct: 607 QQTIALGGLMRDNSTTRQQKVPGLGNVPLIGRLFRSDNDNSQKSNLIIFLQPTIL 661 >UniRef50_Q6AN10 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AN10_DESPS Length = 480 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 14/243 (5%) Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL----GSDLSVATATTHVGFN 235 QV L I I+++ +LG+ + L D G+ + L G L + A G N Sbjct: 180 QVMLEVRIAEISKRVGNQLGINFGL-DGSSGFGLSMLDGLSGLPGGTLPIEPARVLDGLN 238 Query: 236 IGR-INGRL-----LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 IG +N + + AL++ + ++A P L+A Q AS G E P+ V+ + Sbjct: 239 IGSGVNAVFGKSGSYIVAIDALQEDGLVKVLAKPTLIAQSGQSASFLAGGEFPFPVAQ-Q 297 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKL--HISQNVPGQVLQQADGEVLAIDKQEIE 347 S+E+K +G+ TPTVL +GRI L + +S + A V +I+ + + Sbjct: 298 FDRFSIEWKPFGVGLNFTPTVLGEGRISLLVSPEVSDLDFTNTISYAGYVVPSIETRRMS 357 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 T VE+ ++ A+ G+ + PLLGDIP G LFR ELVV +TP Sbjct: 358 TVVELNDNQSFAIAGLMKNNIRESIKKFPLLGDIPILGVLFRSSKYIKNETELVVVVTPH 417 Query: 408 LVS 410 LV+ Sbjct: 418 LVT 420 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P34749 Protein transport protein hofQ n=114 Tax=Enterob... 507 e-142 UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas... 401 e-110 UniRef50_B1J2J3 Type IV pilus secretin PilQ n=5 Tax=Pseudomonas ... 393 e-108 UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteo... 389 e-106 UniRef50_C8QE32 Type IV pilus secretin PilQ n=1 Tax=Pantoea sp. ... 389 e-106 UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella ko... 382 e-104 UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella ... 380 e-104 UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter Re... 380 e-104 UniRef50_Q39X07 Type II and III secretion system protein:NolW-li... 379 e-104 UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobaci... 378 e-103 UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative ... 378 e-103 UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter Re... 376 e-103 UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax... 376 e-103 UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteob... 376 e-102 UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legi... 374 e-102 UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Ta... 371 e-101 UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vi... 371 e-101 UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Pr... 371 e-101 UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadace... 371 e-101 UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammapro... 369 e-100 UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gamm... 366 e-100 UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxoba... 366 e-100 UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=... 365 2e-99 UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnic... 363 5e-99 UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lo... 362 1e-98 UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=ce... 362 1e-98 UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Bu... 361 2e-98 UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD 361 3e-98 UniRef50_B8GPV1 Type IV pilus secretin PilQ n=5 Tax=Chromatiales... 361 4e-98 UniRef50_Q0VMB7 Fimbrial assembly protein pilQ n=3 Tax=Gammaprot... 361 4e-98 UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 359 8e-98 UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis... 359 1e-97 UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobac... 359 1e-97 UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans... 357 3e-97 UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisser... 357 3e-97 UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas in... 357 5e-97 UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromati... 357 6e-97 UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein ... 356 7e-97 UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular or... 356 1e-96 UniRef50_B2K5T6 Type IV pilus secretin PilQ n=46 Tax=Enterobacte... 356 1e-96 UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 355 2e-96 UniRef50_A6GPK2 Pili assembly protein PilQ n=1 Tax=Limnobacter s... 355 2e-96 UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 T... 354 3e-96 UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fast... 354 3e-96 UniRef50_Q21H82 Type II and III secretion system protein n=11 Ta... 354 5e-96 UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=A... 353 7e-96 UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderi... 353 8e-96 UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax... 352 9e-96 UniRef50_D0LHN1 Type IV pilus secretin PilQ n=1 Tax=Haliangium o... 352 1e-95 UniRef50_Q0AF45 Type IV pilus secretin PilQ n=3 Tax=Nitrosomonas... 352 1e-95 UniRef50_Q60BY4 Fimbrial assembly protein PilQ n=1 Tax=Methyloco... 351 3e-95 UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS 351 3e-95 UniRef50_Q1YS04 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=... 349 9e-95 UniRef50_A7BUG3 Bacterial type II and III secretion system prote... 349 1e-94 UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae Re... 348 3e-94 UniRef50_Q5P5P1 Fimbrial type-IV assembly protein PilQ n=4 Tax=B... 346 1e-93 UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Bur... 344 3e-93 UniRef50_Q1K2X4 Type II and III secretion system protein n=1 Tax... 344 4e-93 UniRef50_A9GGP4 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 343 5e-93 UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadac... 342 9e-93 UniRef50_Q1Q8Q7 Type II and III secretion system protein n=5 Tax... 341 2e-92 UniRef50_D0SET7 Type IV pilus biogenesis and competence protein ... 341 3e-92 UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter... 341 4e-92 UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragme... 340 5e-92 UniRef50_Q6MPI6 Fimbrial assembly protein n=1 Tax=Bdellovibrio b... 340 7e-92 UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Ta... 338 2e-91 UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter p... 338 2e-91 UniRef50_A8ZSX5 Type IV pilus secretin PilQ n=1 Tax=Desulfococcu... 338 2e-91 UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thio... 338 2e-91 UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax... 337 3e-91 UniRef50_A5WCG3 Type IV pilus secretin PilQ n=2 Tax=Bacteria Rep... 336 1e-90 UniRef50_C8X4Y6 Type IV pilus secretin PilQ n=1 Tax=Desulfohalob... 335 2e-90 UniRef50_C7LN99 Type IV pilus secretin PilQ n=1 Tax=Desulfomicro... 334 2e-90 UniRef50_C0QLC9 PilQ n=1 Tax=Desulfobacterium autotrophicum HRM2... 334 2e-90 UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein ... 333 7e-90 UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 333 7e-90 UniRef50_C0GNC2 Type IV pilus secretin PilQ n=1 Tax=Desulfonatro... 330 7e-89 UniRef50_B5YJ50 PilQ n=1 Tax=Thermodesulfovibrio yellowstonii DS... 330 8e-89 UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax... 328 3e-88 UniRef50_Q0EXA5 Probable pilQ; fimbrial type-4 assembly signal p... 326 1e-87 UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae Rep... 324 3e-87 UniRef50_D0ZFZ5 Type II secretory pathway, component HofQ n=2 Ta... 321 2e-86 UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax... 321 4e-86 UniRef50_B8FHA0 Type IV pilus secretin PilQ n=1 Tax=Desulfatibac... 320 6e-86 UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax... 318 2e-85 UniRef50_Q7MH82 Type IV pilus (Tfp) assembly protein PilQ n=9 Ta... 315 2e-84 UniRef50_B8DPS5 Type II and III secretion system protein n=4 Tax... 315 3e-84 UniRef50_Q1IRM5 Type II and III secretion system protein n=1 Tax... 312 1e-83 UniRef50_A0LFN7 Type IV pilus secretin PilQ n=1 Tax=Syntrophobac... 312 2e-83 UniRef50_A1HM79 Type II and III secretion system protein n=1 Tax... 310 6e-83 UniRef50_B3TCB2 Putative bacterial type II and III secretion sys... 309 1e-82 UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiob... 308 2e-82 UniRef50_Q1GYK8 Type II and III secretion system protein n=1 Tax... 308 3e-82 UniRef50_C9RKD2 Type II and III secretion system protein n=1 Tax... 304 3e-81 UniRef50_D2RIL0 Type II and III secretion system protein n=2 Tax... 304 4e-81 UniRef50_C6XCK3 Type II and III secretion system protein n=1 Tax... 302 1e-80 UniRef50_A3YI86 Type IV pili biogenesis protein PilQ n=1 Tax=Mar... 300 5e-80 UniRef50_C9LRH4 Putative secretin and TonB short domain protein ... 300 8e-80 UniRef50_B9Z6A5 Type II and III secretion system protein n=1 Tax... 299 9e-80 UniRef50_B1XUD4 Type II and III secretion system protein n=1 Tax... 299 1e-79 UniRef50_A8PP54 Putative fimbrial assembly protein PilQ n=1 Tax=... 298 3e-79 UniRef50_B5S3N0 Gspd-related protein n=4 Tax=Ralstonia solanacea... 297 3e-79 UniRef50_C6P0F2 Type II and III secretion system protein n=1 Tax... 295 1e-78 UniRef50_P03668 Putative assembly protein ORF430 n=1 Tax=Pseudom... 295 1e-78 UniRef50_Q47JK8 Type II and III secretion system protein:NolW-li... 294 5e-78 UniRef50_Q1LE58 Type II and III secretion system protein n=6 Tax... 293 1e-77 UniRef50_Q5P7D0 General (Type II) secretion pathway (GSP) D prot... 292 2e-77 UniRef50_C8X4Q5 Type II and III secretion system protein n=1 Tax... 291 2e-77 UniRef50_Q1H1N3 Type II and III secretion system protein n=2 Tax... 290 7e-77 UniRef50_A6W2T5 Type II and III secretion system protein n=1 Tax... 289 1e-76 UniRef50_Q2LWT2 Type IV secretion n=1 Tax=Syntrophus aciditrophi... 285 1e-75 UniRef50_Q0BFS7 Type II and III secretion system protein n=7 Tax... 285 3e-75 UniRef50_A6C2R4 Type IV pilin multimeric outer membrane protein ... 284 4e-75 UniRef50_C1ZJR8 Type II secretory pathway, component PulD n=1 Ta... 283 9e-75 UniRef50_B8E238 Type II and III secretion system protein n=1 Tax... 282 2e-74 UniRef50_C6WVN7 Type II and III secretion system protein n=1 Tax... 282 2e-74 UniRef50_C4V5Y4 Fimbrial type IV assembly protein pilQ n=1 Tax=S... 280 5e-74 UniRef50_D2QZA3 Type II and III secretion system protein n=1 Tax... 280 7e-74 UniRef50_B5YDZ7 Bacterial type II and III secretion system prote... 280 8e-74 UniRef50_C1TME7 Type II secretory pathway, component HofQ n=1 Ta... 275 2e-72 UniRef50_Q2Y5U9 Type II and III secretion system protein n=1 Tax... 275 2e-72 UniRef50_B1Y7J0 Type II and III secretion system protein n=1 Tax... 274 6e-72 UniRef50_C9KL82 Putative type IV pili biogenesis protein PilQ n=... 274 6e-72 UniRef50_Q7NA54 Similarities with protein transport protein HofQ... 274 6e-72 UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gam... 273 7e-72 UniRef50_C6E2R8 Type II and III secretion system protein n=7 Tax... 272 1e-71 UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citroba... 272 2e-71 UniRef50_B1Y7C9 Type II and III secretion system protein n=1 Tax... 268 3e-70 UniRef50_B1FCE7 Type II and III secretion system protein n=1 Tax... 268 3e-70 UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desu... 266 1e-69 UniRef50_D1Y3M3 Putative type IV pilus biogenesis protein PilQ n... 266 1e-69 UniRef50_B5SC46 General secretion pathway gspd-related protein n... 265 2e-69 UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Synt... 265 2e-69 UniRef50_D1B5I4 Type II and III secretion system protein n=1 Tax... 265 2e-69 UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseu... 264 4e-69 UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Synt... 263 6e-69 UniRef50_A1WZA7 Type II and III secretion system protein n=1 Tax... 263 1e-68 UniRef50_Q3SJB4 Type II secretion system protein D n=1 Tax=Thiob... 261 3e-68 UniRef50_B6BQP5 Type II Secretion PilQ n=2 Tax=root RepID=B6BQP5... 260 9e-68 UniRef50_B9XBV8 Type II and III secretion system protein n=1 Tax... 259 1e-67 UniRef50_A3ZUT9 Type IV pilin multimeric outer membrane protein ... 258 3e-67 UniRef50_B1J8A0 Type II and III secretion system protein n=7 Tax... 258 3e-67 UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Mari... 257 5e-67 UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamm... 256 1e-66 UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gamm... 256 1e-66 UniRef50_C9RLY9 Type II and III secretion system protein n=1 Tax... 255 2e-66 UniRef50_UPI0001C34749 hypothetical protein PretD1_16510 n=1 Tax... 255 2e-66 UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D prot... 255 2e-66 UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-li... 255 2e-66 UniRef50_O80300 Virion export protein n=9 Tax=Inovirus RepID=G4P... 255 3e-66 UniRef50_Q48JN3 General secretion pathway protein GspD n=2 Tax=P... 255 3e-66 UniRef50_P31701 General secretion pathway protein D n=27 Tax=Ent... 254 4e-66 UniRef50_Q1V0G7 Type II Secretion PilQ n=2 Tax=Candidatus Pelagi... 254 5e-66 UniRef50_A8URL9 Putative type II secretion system protein n=1 Ta... 253 8e-66 UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Side... 253 1e-65 UniRef50_A7BV51 Bacterial type II and III secretion system prote... 252 2e-65 UniRef50_A1WZM1 General secretion pathway protein D n=1 Tax=Halo... 252 3e-65 UniRef50_A1WTW1 Pilus (MSHA type) biogenesis protein MshL n=1 Ta... 251 3e-65 UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax... 251 3e-65 UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gamm... 251 3e-65 UniRef50_B6J4A2 Type 4 pili secretin (Outer membrane porin) n=5 ... 251 4e-65 UniRef50_Q3JD22 General secretion pathway protein D n=2 Tax=Nitr... 250 5e-65 UniRef50_B1Y6L5 Type II and III secretion system protein n=1 Tax... 250 6e-65 UniRef50_C9M548 Putative bacterial type II/III secretion system ... 250 7e-65 UniRef50_C7HZF2 General secretion pathway protein D n=1 Tax=Thio... 250 8e-65 UniRef50_D0I542 MSHA biogenesis protein MshL n=1 Tax=Grimontia h... 250 8e-65 UniRef50_D1P0E2 Protein transport protein HofQ n=3 Tax=Providenc... 250 9e-65 UniRef50_P03667 Virion export protein n=4 Tax=root RepID=G4P_BPIKE 250 1e-64 UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Mari... 249 1e-64 UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desu... 249 2e-64 UniRef50_A3ERG1 Putative general secretion pathway protein D n=2... 248 2e-64 UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 T... 247 4e-64 UniRef50_B8CZ92 Type II and III secretion system protein n=1 Tax... 246 1e-63 UniRef50_C6XJ47 General secretion pathway protein D n=1 Tax=Hirs... 246 1e-63 UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n... 246 1e-63 UniRef50_A6FG34 Putative MSHA biogenesis protein MshL n=1 Tax=Mo... 246 1e-63 UniRef50_Q2JVP0 Putative type IV pilus secretin PilQ n=1 Tax=Syn... 246 1e-63 UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Pro... 246 1e-63 UniRef50_A4BES0 Type II secretory pathway, component PulD n=1 Ta... 245 2e-63 UniRef50_B3R7X2 General Secretory Pathway protein D, type II sec... 245 2e-63 UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Coma... 245 2e-63 UniRef50_C5S7Y5 General secretion pathway protein D n=1 Tax=Allo... 245 2e-63 UniRef50_A8EVV0 General secretion pathway protein D n=1 Tax=Arco... 245 3e-63 UniRef50_A8GJQ5 General secretion pathway protein D n=6 Tax=Ente... 245 3e-63 UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acineto... 245 3e-63 UniRef50_Q0AIN2 Type II and III secretion system protein n=3 Tax... 244 4e-63 UniRef50_D2U379 Protein transport protein HofQ n=1 Tax=Arsenopho... 244 4e-63 UniRef50_Q7NHU7 Glr2438 protein n=1 Tax=Gloeobacter violaceus Re... 244 5e-63 UniRef50_Q1N1M8 Type II secretory pathway, component PulD n=1 Ta... 244 5e-63 UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified... 243 6e-63 UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyph... 243 6e-63 UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobiu... 242 1e-62 UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyph... 242 2e-62 UniRef50_C4L998 General secretion pathway protein D n=2 Tax=Bact... 242 2e-62 UniRef50_Q221L0 Type II and III secretion system protein n=1 Tax... 242 2e-62 UniRef50_A8ZWZ5 General secretion pathway protein D n=2 Tax=Desu... 242 2e-62 UniRef50_C1A7C5 Putative general secretion pathway protein D n=1... 242 2e-62 UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax... 242 3e-62 UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cell... 242 3e-62 UniRef50_C4UIB8 General secretion pathway protein D n=4 Tax=Yers... 242 3e-62 UniRef50_Q1YQU4 Putative general secretion pathway protein n=1 T... 242 3e-62 UniRef50_Q7UXD4 Putative uncharacterized protein outD n=1 Tax=Rh... 241 3e-62 UniRef50_C6CIN5 General secretion pathway protein D n=1 Tax=Dick... 241 4e-62 UniRef50_Q2JP24 Type IV pilus secretin PilQ, putative n=1 Tax=Sy... 241 4e-62 UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Bur... 241 4e-62 UniRef50_P31700 General secretion pathway protein D n=5 Tax=Ente... 241 5e-62 UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Meth... 240 5e-62 UniRef50_C6C305 General secretion pathway protein D n=1 Tax=Dick... 240 7e-62 UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhiz... 240 8e-62 UniRef50_C2LEH3 Competence protein E n=3 Tax=Proteus RepID=C2LEH... 240 9e-62 UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desu... 239 1e-61 UniRef50_B3E8S0 Type II and III secretion system protein n=2 Tax... 239 1e-61 UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Coma... 238 4e-61 UniRef50_Q0A5Z6 General secretion pathway protein D n=2 Tax=Ecto... 238 4e-61 UniRef50_Q0VSG7 General (Type II) secretion pathway protein D n=... 237 8e-61 UniRef50_A4SUZ8 Type II and III secretion system protein n=2 Tax... 237 8e-61 UniRef50_B0T7N8 General secretion pathway protein D n=1 Tax=Caul... 237 9e-61 UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax... 237 9e-61 UniRef50_A1U289 General secretion pathway protein D n=4 Tax=Gamm... 236 1e-60 UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphi... 236 1e-60 UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pse... 236 1e-60 UniRef50_B9K747 ComE protein n=6 Tax=Thermotogaceae RepID=B9K747... 236 1e-60 UniRef50_D0X4T6 Putative uncharacterized protein n=1 Tax=Vibrio ... 235 2e-60 UniRef50_A0LPH6 General secretion pathway protein D n=1 Tax=Synt... 235 2e-60 UniRef50_Q1JVV5 Type II and III secretion system protein n=1 Tax... 235 2e-60 UniRef50_O80264 Similar to Gene IV protein :Acc# A04268 n=3 Tax=... 235 3e-60 UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Arom... 235 3e-60 UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burk... 235 3e-60 UniRef50_C0QK68 GspD2 n=1 Tax=Desulfobacterium autotrophicum HRM... 235 3e-60 UniRef50_B7RHZ1 General secretion pathway protein D n=1 Tax=Rose... 235 3e-60 UniRef50_B8GXR3 Type II secretion pathway protein D n=3 Tax=Caul... 234 4e-60 UniRef50_A1TYN1 Pilus (MSHA type) biogenesis protein MshL n=2 Ta... 234 4e-60 UniRef50_Q82WH1 General (Type II) secretion pathway (GSP) D prot... 234 5e-60 UniRef50_A1WFQ3 General secretion pathway protein D n=1 Tax=Verm... 234 5e-60 UniRef50_B0VJ43 Putative uncharacterized protein n=1 Tax=Candida... 234 6e-60 UniRef50_Q04SX5 Type II secretory pathway component, protein D n... 233 8e-60 UniRef50_B0UFJ1 General secretion pathway protein D n=4 Tax=Meth... 233 8e-60 UniRef50_C1SHL2 General secretion pathway protein D n=1 Tax=Deni... 233 8e-60 UniRef50_Q2SVR9 Type II/III secretion system protein n=36 Tax=Bu... 233 8e-60 UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax... 233 8e-60 UniRef50_B6QWW0 General (Type II) secretion pathway (GSP) D prot... 233 1e-59 UniRef50_A1JPH4 General secretion pathway protein D n=28 Tax=Yer... 233 1e-59 UniRef50_Q3A894 Putative type II secretion system protein n=1 Ta... 233 1e-59 UniRef50_B9XM19 Type II and III secretion system protein n=1 Tax... 232 1e-59 UniRef50_D2MI45 Type II secretory pathway, component PulD n=1 Ta... 232 2e-59 Sequences not found previously or not previously below threshold: UniRef50_B2KC06 Type II and III secretion system protein n=1 Tax... 248 3e-64 UniRef50_Q1NKF6 Type II and III secretion system protein:Secreti... 241 4e-62 UniRef50_Q2BKX4 Putative MSHA biogenesis protein MshL n=1 Tax=Ne... 240 6e-62 UniRef50_Q2S975 Type II secretory pathway, component PulD n=1 Ta... 240 8e-62 UniRef50_A8A4B9 General secretion pathway protein D n=30 Tax=Esc... 232 2e-59 >UniRef50_P34749 Protein transport protein hofQ n=114 Tax=Enterobacteriaceae RepID=HOFQ_ECOLI Length = 412 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 412/412 (100%), Positives = 412/412 (100%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL Sbjct: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR Sbjct: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 Query: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ Sbjct: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN Sbjct: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA Sbjct: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL Sbjct: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE Sbjct: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 >UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRB5_PSYIN Length = 689 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 155/398 (38%), Positives = 235/398 (59%), Gaps = 10/398 (2%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 A + + ++L D+PV VLQ +A+ NLV++ VSG ++L L DVPW+QAL ++K Sbjct: 291 SAYQGKAISLNFQDIPVRTVLQLIADFNGFNLVITDSVSGNITLRLDDVPWEQALDIILK 350 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 GL +GN+L + Q + PL + I + YA +++ Sbjct: 351 VKGLGKSLDGNVLMIAPAVELAAKKREQLESENAVANLAPLYSEFIQVNYAKVADISAML 410 Query: 137 EK----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 LLS +G+++VD RTN LL++D + A+++ + +D+PV QV + A +VT+++ Sbjct: 411 SSDKTSLLSERGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQVVIEARMVTVDD 470 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI-NGRLLDLELSAL 251 ELGVKW + + V +L +L A + F + + NG +LDLELSAL Sbjct: 471 SVSEELGVKWGMTSTSSS----TVDSLNVNLPATDAAGTIAFKLAKFSNGDILDLELSAL 526 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVL 311 E + + +IIASPR+ ++ Q A I+QG+EIPY V S SGATSV FK+AVL + VTP + Sbjct: 527 ESENKAEIIASPRITTANQQTAYIEQGTEIPY-VESASSGATSVAFKKAVLSLTVTPQIT 585 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 ++ L L I+Q+ G+ + GE +AID Q+I TQV V +GETL LGGI+ ++N Sbjct: 586 PDNKVILDLEITQDTVGETVSAGTGEAVAIDTQKIGTQVLVGNGETLVLGGIYQQRNSIA 645 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VPLLGDIP+ G LFR +E+ + EL++F+TPR+V Sbjct: 646 VSKVPLLGDIPYLGALFRSTNEENTKSELLIFVTPRIV 683 >UniRef50_B1J2J3 Type IV pilus secretin PilQ n=5 Tax=Pseudomonas RepID=B1J2J3_PSEPW Length = 422 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 152/418 (36%), Positives = 243/418 (58%), Gaps = 12/418 (2%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MK +AALL M + + + ++L DV V VLQ LA+ +NLV S V G+++L Sbjct: 5 MKWLVAALLPMPLLAATPYRGEPISLNFQDVEVRLVLQVLADYAGINLVASDTVQGSITL 64 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 L DVPW QAL+ V++S GL R+EGN+L V + PL Sbjct: 65 RLQDVPWDQALELVLRSKGLGRREEGNVLLVAPAVELAEQALGARMGLELEAQSRPLRRE 124 Query: 121 SITLQYADAGELAKAG------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 + + +A+A ELA+ + +L+ +GS++VD RTN L+ + L+ L Q VAQ+ Sbjct: 125 LLPIHHAEASELAELLLATLADDGILTGRGSLSVDVRTNTLVAHQPEDRLAELRQLVAQL 184 Query: 175 DLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGF 234 D+PV QVE+ A IV N LGV+W A +G+ + DL + A + +GF Sbjct: 185 DVPVRQVEIEARIVEANVDYENSLGVRWGPRLYSEAPALGK--DVFVDLGMERAGSSIGF 242 Query: 235 NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 + R G LLDLELSA+E+ +II+ P+++ ++ + A I +G+E+PYQ ++ +SGATS Sbjct: 243 GVLR-GGVLLDLELSAMEKTGNGEIISQPKVVTANNETARILKGTEVPYQETT-KSGATS 300 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 V F+EA L +EVTP + G++ + + ++++ P V A +V I K E+ +V V Sbjct: 301 VTFREASLSLEVTPQITPDGKVIMTVKVTKDEPDFV--NALNDVPPIRKNEVNAKVRVAD 358 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 GET+ +GG+++ + D VP GD+P+ G+LFR D ++++ EL+VF+TPR+++ + Sbjct: 359 GETIVIGGVYSTTQNNVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIMNDQ 416 >UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteobacteria RepID=A0KN30_AERHH Length = 733 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 160/425 (37%), Positives = 243/425 (57%), Gaps = 29/425 (6%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + + + ++L D+PV VLQ +A+ LNLV + VSG ++L L VPW+QAL + Sbjct: 308 AGKQYQGKPISLNFQDIPVRTVLQLIADFNNLNLVTTDSVSGNITLRLDGVPWEQALDII 367 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +K GL R + NIL V +Q + + PL + + YA A E+A Sbjct: 368 LKVRGLDKRLDNNILLVAPAEEIAAREKQQLESRNQVADLAPLYTEYLQINYAKASEVAA 427 Query: 135 AGE----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 KLLS+KG+++VD+RTN L+++D +S +++ + +D+PV QV + A +VTI Sbjct: 428 LLSSESTKLLSSKGAVSVDERTNVLVVKDTADVISNIKRMLDILDIPVKQVVIEARMVTI 487 Query: 191 NEKSLRELGVKWTLADAQHAGGVGQVTTLGSD-----------------------LSVAT 227 ++ LGV+W + G T G+D L V Sbjct: 488 DDGFDEALGVRWGVTKNDGHGNSTSGTIEGNDSSGNNNGGSTITRPGVDDRLNVNLPVTN 547 Query: 228 ATTHVGFNIGRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 A + F + R+ +G LLDLELSALE++ + +IIASPR+ ++ +PA I+QG+EIPY V Sbjct: 548 AAGTLAFQVARLADGTLLDLELSALEKESKAEIIASPRVTTANQKPALIEQGTEIPY-VE 606 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 S SGATSV FK+AVL ++VTP + R+ L L ++Q+ G+ + G+ ++I+ Q I Sbjct: 607 SSSSGATSVTFKKAVLSLKVTPQITPDNRVILDLTVTQDTKGETVPTGTGDAVSINAQSI 666 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 TQV V +GETL LGGI+ + KS VPLLGDIP G LFR E+++REL++F+TP Sbjct: 667 TTQVLVNNGETLVLGGIYQQTIKSDVSKVPLLGDIPGLGVLFRKTTSENKKRELLIFVTP 726 Query: 407 RLVSS 411 ++V+ Sbjct: 727 KIVTD 731 >UniRef50_C8QE32 Type IV pilus secretin PilQ n=1 Tax=Pantoea sp. At-9b RepID=C8QE32_9ENTR Length = 421 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 200/413 (48%), Positives = 280/413 (67%), Gaps = 5/413 (1%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MK W+ LL + + A Q+++L+ DD PV +LQALA+ ++ NL+++P V G +SL Sbjct: 4 MKVWL--LLFLGLSAPLHASEQRLSLVFDDTPVENILQALADYQQTNLLIAPGVEGRLSL 61 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 L D+ W++AL V + A L QE +L ++ +WQ + +AE+ Q + L + Sbjct: 62 RLEDIEWQRALALVARLARLSVVQEEGVLLIYPESWQQWQAQKIQAEREEQQQQIALTQQ 121 Query: 121 SITLQYADAGELAKAGE---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 ++T YA+AG+ A++ + L++ +GS+TVD RTN LLLRD AL +W+ +DLP Sbjct: 122 TVTFHYANAGDAARSLQAERSLMTPRGSVTVDSRTNSLLLRDTPRALQETVRWLNALDLP 181 Query: 178 VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIG 237 + QVELSAHIVTI+E+ LRELGV W L+ A+ + L L+V+ +G +G Sbjct: 182 LEQVELSAHIVTISEEHLRELGVNWGLSPAEEVMQTLRNPQLAIPLAVSNPAFRMGVTLG 241 Query: 238 RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 I G LL+LELSALEQ+ Q+DIIASPRL SH Q A+IKQG+EIPY+V SG SGAT++EF Sbjct: 242 HIGGDLLNLELSALEQESQIDIIASPRLFTSHQQTATIKQGTEIPYEVKSGNSGATAIEF 301 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 KEAVLGMEVTP VL GRI+LKL +SQN+PG+ + + + L+IDKQEI+TQV ++ GET Sbjct: 302 KEAVLGMEVTPVVLGNGRIQLKLRLSQNMPGRSINTGEHQTLSIDKQEIDTQVTLRDGET 361 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 LALGGIF ++ ++ VP LG +P G LFRH E +++ELV+FITPRLV Sbjct: 362 LALGGIFQQQRAQNENRVPWLGKLPVVGNLFRHQTDEHKKKELVIFITPRLVR 414 >UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7W7_KANKD Length = 701 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 144/413 (34%), Positives = 239/413 (57%), Gaps = 23/413 (5%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 + +TL D+ + +L L + +N+V+S DV G+++L+L +VPW QAL ++KS Sbjct: 287 TYTGETLTLQFQDMDLKAILHTLGDFAGINIVISDDVQGSMALNLVNVPWDQALDIILKS 346 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL RQEGN++ + ++ + + PL I + YA A E+A + Sbjct: 347 KGLGKRQEGNVMMIAPADIIAQREQQELEANKQQEELAPLRTELIQVNYAKAAEIAAILQ 406 Query: 138 K-------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELS 184 +LS +GS+T D+RTN +L++D T + + + VAQ+D+PV QV + Sbjct: 407 AGLGGGSGDGKSVGILSERGSVTTDQRTNTILVQDVSTKIEDVRRLVAQLDIPVRQVLIE 466 Query: 185 AHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI-NGRL 243 A IVT ++ R+LG ++ ++D ++G V +L +A +G + R+ +G + Sbjct: 467 ARIVTADDGFARDLGSRFGVSDVMNSGEVN--GDFNVNLPIANPAGSLGLSFARLQDGIV 524 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLG 303 +D+ELSALE + + +++ASP+++ ++ + A IK G EIPY + SGA +V+FKEAVL Sbjct: 525 VDMELSALESENRGEVVASPKVITANQKEAFIKAGEEIPY-LQGASSGAANVQFKEAVLE 583 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVL------QQADGEVLAIDKQEIETQVEVKSGET 357 ++VTP + GR+ L L I+Q+ G+ + AI+ QEI TQV V +GET Sbjct: 584 LKVTPQITPDGRVILDLAITQDTRGENVIFTSPDGGGSSGAPAINTQEIGTQVLVDNGET 643 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + LGGIF + + VPLLGDIP G LF++ +ED ++EL++F+TP+++ Sbjct: 644 IVLGGIFQHRTTYDESKVPLLGDIPLLGWLFKNTQREDTKQELLIFVTPKIIE 696 >UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella RepID=A8GZ28_SHEPA Length = 688 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 152/412 (36%), Positives = 239/412 (58%), Gaps = 23/412 (5%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 + ++L ++ V VLQ +A+ NLV S V G ++L L DVPW QAL ++++ GL Sbjct: 275 GRSLSLNFQNISVRTVLQIIADYNNFNLVTSDTVEGDITLRLDDVPWDQALDLILQAKGL 334 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE--- 137 R EGNIL V I +++ + PL + + + YA A ++A + Sbjct: 335 DKRIEGNILMVAPIEEIAIRESQELKNMQEVKELAPLYSEYLQINYAKAVDIAALLKGED 394 Query: 138 -KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 LL+++GS+ VD+RTN LL++D + L + + + +D+P+ QV + A +VT+ + Sbjct: 395 SSLLTSRGSVAVDERTNTLLVKDTEETLENIHRLIEVLDIPIKQVLIEARMVTVKDDVSE 454 Query: 197 ELGVKWTLADAQHAGGVGQV----------------TTLGSDLSVATAT-THVGFNIGRI 239 +LGV+W + D Q G L +L A A T + F++ ++ Sbjct: 455 DLGVRWGVTDQQGDKGTSGSLEGAGDIANGIVPSLSDRLNVNLPAAVANPTSIAFHVAKL 514 Query: 240 -NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFK 298 +G +LDLELSALEQ+ + +IIASPR+ S+ + A I+QG EIPY V + SGAT+V FK Sbjct: 515 ADGTVLDLELSALEQENKGEIIASPRITTSNQKAAFIEQGVEIPY-VEASSSGATTVTFK 573 Query: 299 EAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETL 358 +AVL + VTP + R+ L L I+Q+ G+ + G+ ++ID Q I TQV V GET+ Sbjct: 574 KAVLSLRVTPQITPDNRVILDLEITQDSQGKTVDTPTGQAVSIDTQRIGTQVLVDHGETI 633 Query: 359 ALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 LGGI+ ++ S VP+LGDIP+ G +FR ++ER+EL++F+TP++VS Sbjct: 634 VLGGIYQQQLISRVSKVPILGDIPYLGFMFRSTSDKNERQELLIFVTPKIVS 685 >UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter RepID=B9M3I8_GEOSF Length = 911 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 128/405 (31%), Positives = 211/405 (52%), Gaps = 19/405 (4%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + +KVTL D + ++ Q +AE LN +++ DV+GT+S+ L +VPW QAL ++ Sbjct: 515 KVYSGRKVTLEFSDADIRKIFQLIAEVSNLNFLIADDVTGTISIKLVNVPWDQALDVILD 574 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + GL +EGNI+ + A + + A + + + L + YA ++A Sbjct: 575 TKGLGMLKEGNIVQIKPKAKMQSQADEEMATKKARERGMELRTEIFDVNYAAVTDIATQF 634 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 L S +G ++ D RTNR++++D TA+ + + +D P QV + A IV + +R Sbjct: 635 GTLKSDRGIISTDARTNRVIVKDITTAIEDMRMLLKSLDTPEKQVMIEARIVEASTSFVR 694 Query: 197 ELGVKWTL----------ADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRL-LD 245 +LGV+W + ++ G G + + VG + G++ + LD Sbjct: 695 DLGVQWGIHYIDGSASVAGISRLDTGFGGQVAIAPTSGTSGPGAAVGMSFGKLASNIQLD 754 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGME 305 + LSA Q+ I+++PR++ + +PA I QG+ IPYQ +S E T EF EA L +E Sbjct: 755 MRLSAAVTADQIKIMSTPRVVTLNNKPAKISQGASIPYQTTSAE--GTKTEFVEAALTLE 812 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 VTP + G I +K+ S N G G I+K+E T++ +K+GET +GGI+ Sbjct: 813 VTPHITSDGSIGMKIKASNNSAG------TGSPPPINKKEATTELLIKNGETTVIGGIYV 866 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + VP L DIP G LF+ + K + EL++FITP++VS Sbjct: 867 DSDTESDKGVPFLQDIPLLGWLFKSNTKNKSKNELLIFITPKIVS 911 >UniRef50_Q39X07 Type II and III secretion system protein:NolW-like:Secretin/TonB, short-like n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39X07_GEOMG Length = 870 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 124/405 (30%), Positives = 207/405 (51%), Gaps = 15/405 (3%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 G + ++VTL D + ++ Q +AE LN +V DV+GT+SL L +VPW QAL + Sbjct: 470 GKKVYTGRRVTLEFSDADIRKIFQLIAEVSNLNFIVGDDVTGTISLKLVNVPWDQALDVI 529 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +++ GL +++GNI+ + + ++ + + + L+ + YA G++ Sbjct: 530 LENKGLGMQRDGNIVQIRPKSKIMTLADEEQKAKKSREQGMELKTEVFDVNYAAVGDVVT 589 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 L S +G ++ D RTNR++++D ++ + + +D+P QV + A IV + Sbjct: 590 QFNTLKSERGMISQDARTNRVIVKDIAPVVAEMRNLLKSLDIPEKQVMIEARIVEASSTV 649 Query: 195 LRELGVKWTL---------ADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGR-INGRLL 244 +ELG++W + G G +T L G G+ I+G L Sbjct: 650 TQELGIQWGIHARDANTIGVTNADVGFGGILTGLAPTAGTFGPGAAAGITFGKLISGGSL 709 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGM 304 DL+LSAL +++ II+SP+++ + + A I QG IPY S E T EF EA L + Sbjct: 710 DLKLSALASGERIKIISSPKVVTLNNKAAKISQGQSIPYSTVSAE--GTKTEFVEAALTL 767 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 EVTP + G I +K+ + N G V AI+K+E T++ V++GET +GGI+ Sbjct: 768 EVTPHIASDGSISMKIKATNNSAAPAPT---GAVPAINKKEATTELLVRNGETTVIGGIY 824 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + VP DIP G LF+ + + EL++FITP++V Sbjct: 825 VDNDSQADQGVPFFKDIPLLGWLFKSSNTQKIKNELLIFITPKIV 869 >UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L240_HALNC Length = 729 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 129/447 (28%), Positives = 228/447 (51%), Gaps = 49/447 (10%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 G + +++TL D+ + +LQ +A+ N+VVS DV G++SL L +VPW QAL + Sbjct: 276 GEKKYTGERLTLKFQDIQIRPLLQLIADFTGNNIVVSDDVKGSISLRLENVPWDQALDLI 335 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 + + GL R+ GN++ V A + + ++Q PL I + YA A ++ K Sbjct: 336 LTTKGLSMRKNGNVMYVAPTADIVARDKAEIEARQQSQQLAPLSTDIIQINYAKADDIYK 395 Query: 135 AG-------------------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 ++ +S +GS+TVD R+N L++ D +AL + + ++D Sbjct: 396 LLESASKTGKTSADGKGGDTAQRFISDRGSVTVDPRSNSLIVTDTASALDRIRDLIHKLD 455 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVG-QVTTLGSDLSVATATTHVGF 234 PV QV + IV + R+LGV+W + + G + + ++ T+ G Sbjct: 456 KPVKQVLIETRIVIATDNFARQLGVRWGVQAGFNRGNSTFGLGSTAPLVASGTSLPTAGA 515 Query: 235 NIGRI---------------------------NGRLLDLELSALEQKQQLDIIASPRLLA 267 + G + + LLDLELSAL+ + +I++SP+++ Sbjct: 516 STGTVGTAPTDWMVNTPISGTPAGSLGLAILGSNVLLDLELSALQSEGTGEIVSSPKVIT 575 Query: 268 SHLQPASIKQGSEIPYQVSSGESG--ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQN 325 ++ A I QG+EIPY + G + +V FK+AVL EVTP + I + + + ++ Sbjct: 576 TNGHTALISQGTEIPYIATQTAGGVASNTVSFKKAVLSTEVTPQITPNNNIIMDIDVKKD 635 Query: 326 VPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFG 385 P I+ +E++T+VEVK+GET+ LGGI+ +N + + VP GD+P G Sbjct: 636 EPDYTNLLPGTTNPPINTREVKTKVEVKNGETVVLGGIYQFENNNSINKVPFFGDLPGIG 695 Query: 386 QLFRHDGKEDERRELVVFITPRLVSSE 412 LF++ +++R EL++F+TP++++S+ Sbjct: 696 NLFKNKEVKNQRLELLIFVTPKIINSD 722 >UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3G3_9GAMM Length = 672 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 147/427 (34%), Positives = 235/427 (55%), Gaps = 41/427 (9%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L ++ V VLQ LA+ +NLV S V G ++L L +VPW QAL ++K+ Sbjct: 245 YSGEKLSLNFQNIEVRAVLQLLADFTGMNLVTSDTVKGNLTLRLKNVPWDQALDIILKTK 304 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 GL RQ GN+L V A ++ Q + PL + +++A A LA Sbjct: 305 GLAMRQNGNVLMVAPAAEIAAREKQELEAQKQLVELEPLYTEIVEIKFAKADLLATLLRT 364 Query: 139 ------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 LS +GS+T+D RTN LL+RD L + Q + ++D PV QV + + Sbjct: 365 DGKQGGNSGQSGFLSPRGSITIDDRTNSLLIRDTADNLVDIRQVIDELDKPVRQVLIESR 424 Query: 187 IVTINEKSLRELGVKWTLADAQHAGGVGQVTT-----------------------LGSDL 223 IV N +ELGV++ + + G G + L +L Sbjct: 425 IVIANNDFNKELGVRFGTSAQSNTLGAGSSGSLTGLSTNPNNDDQIRANSVVGNDLNVNL 484 Query: 224 SVATATTHVGFNIGRIN-GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 V+ + +G + ++ G +L+LELSA++ + + ++I+SPR++ S+ Q A+I+QG+EIP Sbjct: 485 PVSNPSGSIGLALAKLPLGMILELELSAMQAEGKGEVISSPRVITSNQQQATIEQGTEIP 544 Query: 283 YQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID 342 YQ ++ SGAT+V FKEAVL ++VTP + RI + L +S++ G+V V +ID Sbjct: 545 YQEATS-SGATNVSFKEAVLKLDVTPQITPDDRIVMDLEVSKDEVGEVFLG----VPSID 599 Query: 343 KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 402 + ++TQV V +GET+ LGGI+ + + VP GD+P+ G LF++ KED +REL+V Sbjct: 600 TRSVKTQVLVDNGETVVLGGIYEQSTNDNVERVPFFGDLPYVGFLFKNTFKEDRKRELLV 659 Query: 403 FITPRLV 409 F+TP++V Sbjct: 660 FVTPKIV 666 >UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter RepID=B5E8I3_GEOBB Length = 946 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 129/407 (31%), Positives = 215/407 (52%), Gaps = 19/407 (4%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 P + ++VTL D V ++ Q +AE LN +++ DV+GT+S+ L +VPW QAL Sbjct: 547 PAKKVYTGRRVTLEFSDADVRKIFQLIAEVSNLNFLIADDVTGTISIKLVNVPWDQALDV 606 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 ++ + GL +EGNI+ + + N + A + A+ + L+ + YA ++A Sbjct: 607 ILDAKGLAMVREGNIVQIKPRSKMQNQADEELAAKKAAERLMELKTMVFEVNYASVNDVA 666 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 L S +G +T D+RT+R++++D +TAL+ ++ + +D P QV + A IV Sbjct: 667 MQFGMLKSDRGVITKDERTSRVIVKDIQTALNDMKALLKTLDAPEKQVMIEARIVEATST 726 Query: 194 SLRELGVKWTLADAQHAG----------GVGQVTTLGSDLSVATATTHVGFNIGRINGRL 243 R+LGV+W L+ + G G V + S +G + G++ + Sbjct: 727 FTRDLGVQWGLSYRDGSASVAGINSVDTGFGGVVSAAGPGSSGAGGLGLGMSFGKLTSNI 786 Query: 244 -LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVL 302 LD+ L+A Q+ II++P+++ + + A I QG IPYQ +S E T EF EA L Sbjct: 787 KLDMRLAAAATIGQVKIISTPKVVTLNNKAAKISQGQSIPYQTTSAE--GTKTEFVEAAL 844 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 +EVTP + G + +K+ S N PG G I+K+E T++ V +G+T +GG Sbjct: 845 TLEVTPHITADGSVSMKIKASNNSPG------TGSPPPINKKEATTELVVSNGDTTVIGG 898 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 I+ + VP L DIP G LF+ + K+ + EL++FITP++V Sbjct: 899 IYVDSDTESDTGVPFLSDIPLLGWLFKSNSKQKTKTELLIFITPKIV 945 >UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZY4_CHRSD Length = 668 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 146/415 (35%), Positives = 229/415 (55%), Gaps = 25/415 (6%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 + ++L ++ V +VL L++ LN+V S V G+V+L+L VPW QAL +++S Sbjct: 253 TYTGEPISLNFQNIQVREVLSVLSDFSGLNIVASDSVQGSVTLNLQQVPWDQALALILQS 312 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL +R+ G+++ V + + +A+++ PL + ++YA A +LA Sbjct: 313 HGLASRRNGDVIVVAPVDELAQMERQTLENRAQSEQLAPLVTDYVQVRYAKATDLAAMLR 372 Query: 138 -----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 LLS +G +TVD+RTN LL+RD + L+++ + ++D+PV QV++ A IV + Sbjct: 373 GSEGFGLLSERGRVTVDERTNTLLVRDTREQLASIRGMLERLDVPVRQVQIEARIVIARD 432 Query: 193 KSLRELGVKWTLA-------DAQHAGGVGQVTTLGSDLSVATATTHVG--------FNIG 237 + RELGV W ++ D G V G++ A + +G F+ G Sbjct: 433 TASRELGVNWGISQRQGVTFDDDGVGSVVDRNPSGANRGSAGLSVDLGDSDGSGSTFSFG 492 Query: 238 RINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 ++G LLDLEL ALE + + I+ P+++ ++ + A IKQG EIPYQ S+ SGAT+VE Sbjct: 493 YLSGDVLLDLELRALESEGKSQTISQPKVITANQKTAVIKQGQEIPYQESTS-SGATNVE 551 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 FKEAVL +E TP + G I + L I+ + V + AID IETQV V G Sbjct: 552 FKEAVLSLEATPQITPDGSIVMDLLINNDT---VADNSYDGAPAIDTNSIETQVLVDDGA 608 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 T+ LGGI T + P LGD+P G LFR+ + +E+ EL++FITP ++ Sbjct: 609 TVVLGGILTSEQLRNLYKTPFLGDLPLIGSLFRYTQESNEKVELLIFITPTIIGD 663 >UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteobacteria RepID=A1TYV8_MARAV Length = 704 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 144/423 (34%), Positives = 222/423 (52%), Gaps = 33/423 (7%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 +K++L D+ V VLQ +A+ LNLV S V G+++L L +VPW QAL ++K+ Sbjct: 284 PYTGEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVGGSITLRLQNVPWDQALDLILKT 343 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA---K 134 GL RQ GN+L V + + P+ I + YA A ++ + Sbjct: 344 KGLDKRQIGNVLLVAPAEEIAAREKLELETNKQIAELAPVRLDIIQVNYAKAADVVALIQ 403 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 A E+L+S++G ++ D RTN + +R+ L + + V+ D+PV QV + A IV Sbjct: 404 ADEELISSRGFVSSDARTNTISVRETAEKLEEIRRLVSTWDVPVRQVSIEARIVRAQTNV 463 Query: 195 LRELGVKWTLADAQHAG---------------------GVGQVTTLGSDLSVATATTHVG 233 +LGV+W A G G + L V + G Sbjct: 464 AEDLGVRWGGAAYNVDGDDVITVGGSLGTLQEARDAASGGSNTISFPGALGVDLGVSGDG 523 Query: 234 ---FNIGRINGRLL-DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 F IG + L DLELSALE + ++++ PR++ + Q ASIK G EIPYQ ++ Sbjct: 524 ASSFAIGWGSDDFLVDLELSALESDGRAEVVSQPRVVTADRQTASIKSGEEIPYQEATS- 582 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 SGAT++EFKEAVL +EVTP + +I + L ++Q+ G+V + +I+ E+ TQ Sbjct: 583 SGATNIEFKEAVLSLEVTPQITPDDKIIMDLVVNQDSRGEVTAG----IPSINTNEVTTQ 638 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V V +GET+ LGGIF + + P LGDIP+ G+LF+ DER EL++FITP+++ Sbjct: 639 VLVANGETVVLGGIFQSEVATQTTKTPFLGDIPYLGRLFKRTEHIDERSELLIFITPKII 698 Query: 410 SSE 412 ++ Sbjct: 699 KND 701 >UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legionella longbeachae D-4968 RepID=D1RGV5_LEGLO Length = 701 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 136/419 (32%), Positives = 231/419 (55%), Gaps = 29/419 (6%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 ++++L ++ + VLQ LA+ +N+V S V G ++L L ++PW QAL ++K+ Sbjct: 268 FSGRRISLNFQNISIRSVLQLLADFTGINIVASDRVQGNITLRLNNIPWDQALDIILKTQ 327 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE- 137 GL RQ GN++ + + N+ +Q Q + Q P+ + I + YA A +LA + Sbjct: 328 GLAQRQNGNVMVIDTQKSFNDMEEQQLKSQHKIQRLEPVRSELIQINYAKATDLAILIKD 387 Query: 138 ---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 LLS KG ++VD RTN + ++D+ + + + + + ++D+PV QV + A IV + + Sbjct: 388 RQNSLLSDKGKVSVDTRTNTIWIQDSGSRVDEVRKLIKELDVPVKQVLIEARIVEVTKDF 447 Query: 195 LRELGVKWTLADAQH-AGGVGQVTTLGSDLSVATATTH--------------------VG 233 ++LG++W ++ QH +G + L ++ A T VG Sbjct: 448 AQDLGIRWGVSKPQHLSGTLAGANQLAQGVAPADVTPFTDRLNLDLVAAPLTKANPATVG 507 Query: 234 FNIGRINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 + ++ LLDLELSALE + ++I+SPRL+ ++ QPA I G EIPYQ S+ SGA Sbjct: 508 IALAQLGDNILLDLELSALESEGLAELISSPRLITANQQPALIDSGQEIPYQQSTS-SGA 566 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 T+V FK+AVL ++V P + +I + L I+Q++ + Q V AI +EI+T V V Sbjct: 567 TAVAFKKAVLSLKVIPQITPDNKILMDLKINQDL--ALPNQTYNGVPAIATKEIQTNVLV 624 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +G+T+ LGGI+ + VP G +P G LF++ EL++FITP+++++ Sbjct: 625 SNGQTIVLGGIYQQDKSKTITRVPFFGQLPVVGNLFKNTQIGVHNDELLIFITPKIITN 683 >UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Tax=Legionella RepID=Q5X6H2_LEGPA Length = 698 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 136/417 (32%), Positives = 232/417 (55%), Gaps = 30/417 (7%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 ++++L ++ + VLQ LA+ +N+VVS V G ++L L D+PW QAL ++ + GL Sbjct: 270 GKRISLNFQNISIRAVLQLLADFTGINMVVSDKVQGDITLRLNDIPWDQALDIILTTQGL 329 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE--- 137 R++GN++ + + A + Q Q + P+ + I + YA A ++A + Sbjct: 330 DKRRKGNVMLIDTKASMDKMEEEQLKSQQTIEKLEPIRSDLIQINYAKAADIAVLIKDKQ 389 Query: 138 -KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 LLS +G ++VD RTN + ++D T + + + + Q+D+PV QV + A IV + + + Sbjct: 390 NSLLSDRGKISVDARTNTIWIQDTGTKIEEVRELIKQLDIPVKQVLIEARIVEVTKDFSQ 449 Query: 197 ELGVKWTLADAQHAGGVGQVTT-----------------LGSDLSVATATT----HVGFN 235 ++G++W ++ H G + L DL+ A T VG Sbjct: 450 DIGIRWGVSRPTHLSGTLEGANELARGTAPANVVPLERRLNLDLAAAPLTGATPASVGIA 509 Query: 236 IGRINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 + ++N LLDLELSALE + + ++I+SPRL+ ++ Q A I+ G EIPYQ ++ SGAT+ Sbjct: 510 LAKLNDNILLDLELSALESEGRAELISSPRLITTNQQAAVIESGEEIPYQEATS-SGATA 568 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 V FK+AVL ++VTP + G+I + L I+Q+ P V AI +EI+T V V + Sbjct: 569 VAFKKAVLSLKVTPQITPDGKILMDLQINQDTPSPQTFLG---VPAIITKEIQTNVLVNN 625 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G+T+ LGGI+ + + +P G++P G LF + + EL++FITPR++++ Sbjct: 626 GQTIVLGGIYKQDKNKVINRIPFFGELPVVGILFSNRQITLKNEELLIFITPRIITN 682 >UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vibrionaceae RepID=C9QNG5_VIBOR Length = 563 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 149/410 (36%), Positives = 248/410 (60%), Gaps = 22/410 (5%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + +K+++ D+PV VLQ +A+ NLVVS VSG ++L L +PW+Q L +++ G Sbjct: 154 EAKKISINFQDIPVRHVLQLIADYNDFNLVVSDSVSGNLTLRLDGLPWQQVLDVILQVKG 213 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELAKAGE- 137 L R N++ + A + R+E E+AR +A L L + + +++A A E+A Sbjct: 214 LDKRVMDNVVLIAPQAELDAR-HREELEKARLEAELGELRSEIVKVKFAKASEIASMIGG 272 Query: 138 ----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 +LS++G+++VD+RTN LL+RD + + +++ ++ +D+PV QV++ A IVT++E Sbjct: 273 EGAISMLSSRGALSVDERTNALLIRDLQPNIDVIQELISALDIPVKQVQIEARIVTVHEG 332 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSV-------------ATATTHVGFNIGRIN 240 +L ELGV+W + + +G +V + + + F + ++ Sbjct: 333 NLDELGVRWGYHNTNGSTSLGSSIEDNVFGAVPIDDMLNVNLAATSVNASSIAFQVAKLG 392 Query: 241 GR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKE 299 LLDLELSAL+++ + ++I+SPRL+ ++ +PA I+QG+EIPY SS SGATSV FK+ Sbjct: 393 SDMLLDLELSALQRESKAEVISSPRLITTNKKPAYIEQGTEIPYLESSS-SGATSVAFKK 451 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 AVL ++V P + R+ L L ++Q+ PG +++ GE +AI+ Q I TQV V +GET+ Sbjct: 452 AVLSLKVVPQITPDNRLVLDLSVTQDRPGDIVKTGTGEAVAINTQRIGTQVLVDNGETVV 511 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 LGGIF D VP+LGD+P G LFR ++ + EL++F+TP++V Sbjct: 512 LGGIFQHSVTDAVDKVPMLGDLPLLGALFRRTYQKMGKSELLIFVTPKVV 561 >UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Proteobacteria RepID=Q489N5_COLP3 Length = 706 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 151/420 (35%), Positives = 242/420 (57%), Gaps = 34/420 (8%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 + ++L D+PV VLQ +A+ + NL++S V+G ++L L VPW QAL ++K GL Sbjct: 288 GRSISLSFQDIPVRTVLQIIADYNEFNLIISDTVTGNITLRLDGVPWDQALSIILKVKGL 347 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE--- 137 R +GNIL V A+ + + + L + + + YA A E ++ + Sbjct: 348 DKRMQGNILMVAPSDELAAREAQSLQAKQQVEELATLYSEYLQINYAKAAEFSELIKNED 407 Query: 138 -KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 +LS +GS++VD+RTN LL+RD ++ +++ + +D+PV QV + A +VT+ + Sbjct: 408 TSILSDRGSVSVDERTNTLLIRDTAKSIEDIKRMITILDVPVRQVVIEARMVTVKDNMNE 467 Query: 197 ELGVKWTLADAQH---------------------AGGVGQVTTLGS----DLSVATATTH 231 ELG++W + + GVGQV T+G +L VA A Sbjct: 468 ELGIRWGVTNTDGEFATSGSIEGASSANGTRGVTTPGVGQVPTIGDGLNVNLPVANAAGT 527 Query: 232 VGFNIGRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES 290 + F + R+ NG +LDLELSALE++ + ++IASPR+ ++ + A I+QG EIPYQ + S Sbjct: 528 IAFQVARLANGTILDLELSALEKENKGEVIASPRITTANQKEAYIEQGVEIPYQ-EAASS 586 Query: 291 GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQV 350 GAT+ +FK+AVL + VTP + +I L L ++Q+ + G AID Q I TQV Sbjct: 587 GATATQFKKAVLSLTVTPHITPDDKIILDLVVTQDTISDITS---GFAPAIDTQRIGTQV 643 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 V +GET+ LGGI+ + S +P+LGDIP+ G LFR+ + +E++EL++F+TPR+V+ Sbjct: 644 LVNNGETIVLGGIYQQAIISTVSKIPILGDIPYLGWLFRNSSQLNEKKELLIFVTPRIVT 703 >UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadaceae RepID=B9MDF0_DIAST Length = 696 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 135/425 (31%), Positives = 220/425 (51%), Gaps = 36/425 (8%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 A +K++L ++ V +LQ +A+ N+V S V+G ++L L DVPW QALQ ++ + Sbjct: 272 AYSGEKLSLNFQNIEVRSLLQVIADFTNFNIVTSDTVTGALTLRLKDVPWDQALQIIMDA 331 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG- 136 GL R+ G +L + + + Q PL ++ L YA A ++ Sbjct: 332 KGLGMRKSGTVLWIAPKDEIDERTKKDYEAALAIQKLEPLRTQAFQLNYAKAADMVTQLT 391 Query: 137 -------------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 + LS +GS + RTN+L + D L + Q +A +D+PV QV + Sbjct: 392 MSSQGGSSTSGYSNRFLSDRGSAISEPRTNQLFVTDTSAKLEEVRQLLATLDVPVRQVMI 451 Query: 184 SAHIVTINEKSLRELGVKWTLADAQHA--------------GGVGQVTTLGSDLSVATAT 229 A IV + R LGV+ GG G + S++ + Sbjct: 452 EARIVEARDTFGRSLGVRLGGGSRTGGSAVGGTYDNVAGPTGGSGMSPFVSLPASLSGVS 511 Query: 230 THVGFNIGRIN---GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 T F + N R L LELSA+E Q I++SPRL+ + A I+QG+E PY V+ Sbjct: 512 TVGSFALSIFNSNASRFLSLELSAMEADGQGKIVSSPRLITADQTKALIEQGTEYPYSVT 571 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 +GAT++ FK+AVL +EVTP + +G I L L ++++ G+ Q +AID + I Sbjct: 572 -APNGATTIAFKKAVLKLEVTPQITPEGNIILDLDVNKDSRGESTTQG----VAIDTKHI 626 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 +TQV +++G T+ +GGIF + + ++ +P+LGD+P G LF++ KE +RE++VFITP Sbjct: 627 KTQVLIENGGTVVIGGIFEMEETNQENKIPVLGDVPVVGNLFKNRTKESTKREMLVFITP 686 Query: 407 RLVSS 411 ++++ Sbjct: 687 KVITD 691 >UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammaproteobacteria RepID=PILQ_PSEAE Length = 714 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 138/435 (31%), Positives = 224/435 (51%), Gaps = 44/435 (10%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 A +K++L D+ V VLQ +A+ LNLV S V G ++L L +VPW QAL V+K+ Sbjct: 278 AYTGEKLSLNFQDIDVRSVLQLIADFTDLNLVASDTVQGNITLRLQNVPWDQALDLVLKT 337 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL R+ GN+L V ++ Q + PL I + YA A ++AK + Sbjct: 338 KGLDKRKLGNVLLVAPADEIAARERQELEAQKQIAELAPLRRELIQVNYAKAADIAKLFQ 397 Query: 138 KLLS---------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 + S +GS+TVD RTN ++ + L L + V+Q+D+PV QV + A IV Sbjct: 398 SVTSDGGQEGKEGGRGSITVDDRTNSIIAYQPQERLDELRRIVSQLDIPVRQVMIEARIV 457 Query: 189 TINEKSLRELGVKWTLA-DAQHAGGVGQVTTLGS-------------------------- 221 N + LGV+W A + G G+ +G Sbjct: 458 EANVGYDKSLGVRWGGAYHKGNWSGYGKDGNIGIKDEDGMNCGPIAGSCTFPTTGTSKSP 517 Query: 222 ----DLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 DL AT+ +G + +LDL+LSA+E+ +I++ P+++ S + A I + Sbjct: 518 SPFVDLGAKDATSGIGIGF-ITDNIILDLQLSAMEKTGNGEIVSQPKVVTSDKETAKILK 576 Query: 278 GSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE 337 GSE+PYQ +S ++ FKEA L +EVTP + RI +++ ++++ P Q Sbjct: 577 GSEVPYQEASSSGATST-SFKEAALSLEVTPQITPDNRIIVEVKVTKDAPD--YQNMLNG 633 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 V I+K E+ ++ V GET+ +GG+F+ + + VP LG++P+ G+LFR D D + Sbjct: 634 VPPINKNEVNAKILVNDGETIVIGGVFSNEQSKSVEKVPFLGELPYLGRLFRRDTVTDRK 693 Query: 398 RELVVFITPRLVSSE 412 EL+VF+TPR+++++ Sbjct: 694 NELLVFLTPRIMNNQ 708 >UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gammaproteobacteria RepID=B7VLJ8_VIBSL Length = 572 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 151/419 (36%), Positives = 241/419 (57%), Gaps = 30/419 (7%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + + +++ D+PV VLQ +A+ NLVVS V+G ++L L VPW+Q L +++ G Sbjct: 153 EGKVISINFQDIPVRNVLQLIADYNDFNLVVSDSVTGNLTLRLDGVPWQQVLDIILQVKG 212 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE-- 137 L R +GN++ V A + + + + L++ I + +A A ++A Sbjct: 213 LDKRVDGNVILVAPKAELDLREQQALEKSRLEEELGELKSEIIKINFAKATDIADMIGGE 272 Query: 138 ---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +LS +GS+T+D+RTN LL+R+ + ++ + + +D+PV QV++ A IVT+ E + Sbjct: 273 GAVSMLSERGSITIDERTNSLLIRELEENIAVIRGIIESLDIPVKQVQIEARIVTVTEGN 332 Query: 195 LRELGVKWTLADAQHAGGVGQVTTLGSD-----------------------LSVATATTH 231 L ELGV+W ++ + VG + + + + Sbjct: 333 LDELGVRWGVSSTNGSFKVGGSIEGNHPSQITPYDDNGGNSAIDDFLNVNLGATSPSASS 392 Query: 232 VGFNIGRING-RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES 290 + F + ++ LLDLELSAL+Q+ + +II+SPRL+ ++ +PA I+QG+EIPY SS S Sbjct: 393 IAFQVAKLGSDTLLDLELSALQQESKAEIISSPRLITTNKKPAYIEQGTEIPYLESSS-S 451 Query: 291 GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQV 350 GATSV FK+AVL ++VTP + R+ L L ++Q+ PGQV++ GE +AID Q I TQV Sbjct: 452 GATSVAFKKAVLSLKVTPQITPDNRLVLDLSVTQDRPGQVVKTGTGEAVAIDTQRIGTQV 511 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V +GET+ LGGIF S D VPLLGD+P G LFR + + EL++F+TP++V Sbjct: 512 LVNNGETVVLGGIFQHSVSSQVDKVPLLGDLPVLGALFRRSYENVGKSELLIFVTPKVV 570 >UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxobacter RepID=A7H857_ANADF Length = 893 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 141/428 (32%), Positives = 224/428 (52%), Gaps = 36/428 (8%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 P + +++TL D+ + +L+ +A+ K N+VV+ DV+G V++ L +VPW QAL Sbjct: 461 PQARGYSGRRITLDFHDIDIRNLLRLIADVSKKNIVVADDVTGKVTVALRNVPWDQALDL 520 Query: 74 VVKSAGLITRQEGNILSVHSI-AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 V+KS GL + GN++ + A AR EAE+AR +PL+ R I + +A AG++ Sbjct: 521 VLKSKGLGKEEMGNVIRIARFEAIAKEQQARAEAEKARIP-LMPLKVRIIPVNFARAGDV 579 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 + + +LS +GS++ D+RTN L+++D + AL E V +D + QV + + IV + Sbjct: 580 SGRVKDVLSERGSVSTDERTNVLIVKDVQEALVRAEGLVRNLDTEIPQVLIESRIVEASS 639 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATA------------------------ 228 + LGV+W +A G T + +VA A Sbjct: 640 NFNKALGVQWG-GNASFTQATGNPTGVAFPNNVAAAGGAGPGNSFGTAANPNYAVSLPAP 698 Query: 229 -----TTHVGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 +G G G L+L LSALE + I++P++ + A+I QG IP Sbjct: 699 VGDGQGGALGLVFGSAGGAFNLNLRLSALENNGVVKTISAPKIATIDNREATIGQGISIP 758 Query: 283 YQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID 342 + S T+ F EA L ++VTP V G I LK+ + N P L A+G+ +I Sbjct: 759 FSQVSASGVNTT--FIEAKLELKVTPHVSADGSILLKIKATNNQPNPQLTGANGQ-PSIS 815 Query: 343 KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 402 K+E ET+V VK GET +GGI+TR+ + VP LG +P G FR+ ++D+ EL++ Sbjct: 816 KREAETEVLVKDGETTVIGGIYTRQTANRTSEVPFLGKLPLLGYFFRNMSEQDDHTELLI 875 Query: 403 FITPRLVS 410 FITPR+++ Sbjct: 876 FITPRILN 883 >UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=Chromobacterium group RepID=Q7NZU2_CHRVO Length = 697 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 136/424 (32%), Positives = 221/424 (52%), Gaps = 34/424 (8%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 K K++L ++ V VLQ +AE LN+V S V+G ++L L DVPW QAL +++S Sbjct: 271 YKGDKLSLNFQNIEVRTVLQVIAEFTGLNVVTSDSVTGNITLRLKDVPWDQALDLILQSK 330 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-- 136 GL R+ GNI+ + + + + + PL + + L+Y A + K Sbjct: 331 GLDQRRNGNIIQIAPRDELLARDKQVQEARQQLATLEPLRSETFVLRYRSAEDFKKVLDG 390 Query: 137 -------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 E LLS +GS+ +D +TN L++ D TA+ + + + D+PV QV + A IV Sbjct: 391 DNNSGKKESLLSERGSVLIDPKTNTLIVNDIGTAIDKIRDVITKTDIPVKQVLIEARIVE 450 Query: 190 INEKSLRELGVKWTLADAQHAGGVG----------------------QVTTLGSDLSVAT 227 + R+LG+K T G + Q T G +L +AT Sbjct: 451 ATDNWERDLGIKLTYDRMDPKGIISGNPLGTNVNNVTNLNNNQPYVIQTTPAGVNLPIAT 510 Query: 228 ATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS 287 + + +L LEL A++ + + II+SPR++ + Q ASI+QG+EIPYQ +S Sbjct: 511 PYGTLSALYNVGHSVILGLELQAMQAEDKGRIISSPRVMTADRQEASIEQGTEIPYQEAS 570 Query: 288 GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIE 347 SGATSV FK+AVL + V P + + + + ++++ ++ ++ ++I Sbjct: 571 S-SGATSVSFKKAVLRLNVKPQITPDNHVIMDITVNKDSAN--FEKTVNGTPSLSTEKII 627 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 TQV V++G T+ LGGI+ ++ + VP LGDIP G LFR K D+R EL++FITP+ Sbjct: 628 TQVLVENGGTVVLGGIYQQQLNDVINKVPFLGDIPLLGALFRSSQKIDKRSELLIFITPK 687 Query: 408 LVSS 411 +++ Sbjct: 688 VIND 691 >UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A4Y8_ALHEH Length = 694 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 143/411 (34%), Positives = 223/411 (54%), Gaps = 23/411 (5%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 +TL DV V +VLQ LA+ +N V+S V G ++L L +VPW AL+ ++++ Sbjct: 279 TYTGDPITLDFQDVEVRRVLQILADFNDMNAVISDSVDGRLTLRLVEVPWDHALEIILEA 338 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL R+ GN+L+ +E + PL + I + YA A ++A + Sbjct: 339 QGLDVRERGNVLTFAPTEELAARDRAREEARRTVDEVAPLSSAFIQVNYARAEDIANLLK 398 Query: 138 ----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 LLS +G + +D+RTN L+++D + + + V ++D+PV QV + + IV ++ Sbjct: 399 GDETSLLSERGQVAIDERTNLLIVQDMERNIDDIRNLVNRLDIPVQQVLIESRIVIADDD 458 Query: 194 SLRELGVKWTLADAQHAGGVG--------------QVTTLGSDLSVATATTHVGFNIGRI 239 R+LGV++ G G L DL +G IGRI Sbjct: 459 FSRDLGVRFGYTATGSLGSEGTAIGARPTPTPGIDGTDDLMVDLPAPAEAPRLGLAIGRI 518 Query: 240 NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKE 299 RLL LELSA+E + + ++I+SPR++ ++ + A+I+QG EIPYQ + SGAT+VEFKE Sbjct: 519 GDRLLQLELSAMETEGRGEVISSPRVITANQREANIRQGVEIPYQEETA-SGATNVEFKE 577 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 AVLG+ VTP + R+ + L +S + G+V V +ID Q + TQV V +GET+ Sbjct: 578 AVLGLTVTPQITPDDRVIMNLEVSNDTVGEVFAG----VPSIDTQSVTTQVLVDNGETVV 633 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 LGG++ R + VP G +P G LFR+ DE+ EL+VF+TPR++ Sbjct: 634 LGGVYERASGEQTRRVPFFGSLPGVGWLFRNRLTFDEQSELLVFVTPRILD 684 >UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lovleyi SZ RepID=B3E9T4_GEOLS Length = 891 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 125/406 (30%), Positives = 211/406 (51%), Gaps = 20/406 (4%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +KVTL D V ++ Q L+E N V+ +V+GT+SL L +VPW QAL ++ + Sbjct: 491 YNGRKVTLEFADAEVRKIFQLLSEVSNKNFVLGDEVTGTISLKLVNVPWDQALDIILDTK 550 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 GL R+EG I+ + + + + + + PL+ + YAD + Sbjct: 551 GLDKREEGTIVLIRGKGKFKSLLDEEMEIRKSTLKSEPLQTAMFDVNYADLASIVSQFNS 610 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 + + +G +T D+RTN+++++D K+A+ + + +A +D+P QV + A IV + + L Sbjct: 611 IKTDRGLITQDQRTNKVIVKDVKSAVDDMRKILASLDVPEKQVMIEARIVEASSTFTQSL 670 Query: 199 GVKWTL----ADAQHAGGVGQVTTLGSDLSVATATTHV--------GFNIGRINGRL-LD 245 GV W + A AG T G S A ++ V G + G ++ + LD Sbjct: 671 GVNWGIHYRDGSASIAGINSMDTNFGGLASTAPTSSGVSGSPGAAAGISFGTLSSNIKLD 730 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGME 305 L L+A + I+++PR+ + + A I QG +IPY S+ + T +F EA L +E Sbjct: 731 LRLNAAVSAGLVRIVSTPRVATLNHKSAKITQGQQIPYTASTSDKIET--KFVEAALALE 788 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 VTP + G + +K+ + PG G AI+K++ T++ ++ GET +GGIF Sbjct: 789 VTPHINPNGTVVMKIDAKNDSPGST-----GNPPAINKKQATTEMMLRDGETTVIGGIFV 843 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + D VP L D+PW G LF+ + + R EL++FITPR+++S Sbjct: 844 ESESNNDDGVPFLADVPWLGGLFKSNETKRNRNELLIFITPRIINS 889 >UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=cellular organisms RepID=Q3A2N4_PELCD Length = 874 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 130/403 (32%), Positives = 202/403 (50%), Gaps = 17/403 (4%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 QK++L+ DD + +LQ + E LN++V DV G ++L L DVPW QAL V++ L Sbjct: 476 GQKISLVFDDADIRNILQLIGEVSDLNIIVGDDVKGNMTLRLIDVPWDQALDLVLEIREL 535 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 QEGN+L + +A Q A + L I + Y D L +A +K L Sbjct: 536 GKLQEGNVLRILPLAKIRQMQQEQFAAARAKEKLEDLVTDLIPVSYTDVEGLVEACKKRL 595 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S +G + D R +L++ D + ++ ++Q V +D PV QV + A IV + R+LGV Sbjct: 596 SDRGKVIGDVRDKKLIVTDIPSVVADIKQLVRLLDTPVRQVLIEARIVEASATFSRDLGV 655 Query: 201 KWTLA-----------DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN--GRLLDLE 247 W ++ + G G + + ++ G G++ +LDL Sbjct: 656 NWGISYQHNPGSDVEGNDASIGMGGTLVGIPVSPGEVSSGIVSGLTFGQVGVDKTVLDLR 715 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 L+ALEQ I+++PR+ + + A + QG+EIPY S + T EFK+A L ++VT Sbjct: 716 LAALEQSGHGRIVSTPRVSTLNGEEAEVAQGTEIPYLSVSDD--GTKTEFKKAELSLKVT 773 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 P + G + L++ + G E AID + T+V VK GET +GGIF + Sbjct: 774 PEINPDGSVILEIEAKNDSRGA--NTGLSEAPAIDTKRATTKVLVKDGETTVIGGIFIQD 831 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 VP L ++P G LF+ +ERREL+VFITPR++ Sbjct: 832 KSESDSGVPWLMNVPILGHLFKSKSVSEERRELLVFITPRILD 874 >UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Burkholderia RepID=A2S716_BURM9 Length = 616 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 132/406 (32%), Positives = 211/406 (51%), Gaps = 19/406 (4%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 + + +++ + +A V A A LN+VVS V GTVSL L +V W+ A ++ + Sbjct: 213 SGDNRPISINLQQASLAAVFDAFARFTGLNIVVSERVRGTVSLRLNNVRWRSAFDALLDA 272 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA---- 133 GL + G+++ V +A ++ ARA PL +R L+YA A ++ Sbjct: 273 HGLAMARRGSVIWVAPVAELAERERQRFDAHARAAQLEPLASRGFVLRYARAADVQRLLA 332 Query: 134 -KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 AG+++LS +GS+ D RTN L + D L+ + + ++D P QV + A IV + Sbjct: 333 GSAGQRILSKRGSVLADPRTNLLFVTDLSGRLAQIADLIGKLDTPSRQVLIEARIVEGDR 392 Query: 193 KSLRELGVKWTLADAQHA-GGVGQVTTLGSDLSVATATTHVGFNIGRIN--------GRL 243 R LG + L G V L+ A GF+ RL Sbjct: 393 GFSRNLGARLALRAPDAGERATGIVAGRNGTLAELAARPISGFDAATAGLTLFAARASRL 452 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLG 303 LD+ELSALE + + I++SPR++ + A ++QG+E+PYQ G +G + V+F+ A L Sbjct: 453 LDVELSALEAEGRGQIVSSPRVVTADRTKAVVEQGAELPYQAKVG-NGVSGVQFRRATLK 511 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 +EV P + GR+ L L ++++ G+ AI + ++T+VEV++G T+++GGI Sbjct: 512 LEVEPQITPDGRVILDLDVAKDSVGEETASG----PAIHTKHVQTRVEVENGGTVSIGGI 567 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 F ++ VPLLG IP G LFRH + +R ELVV+ITP +V Sbjct: 568 FESDDRDDVTRVPLLGKIPVLGALFRHRAQRAQRSELVVYITPTVV 613 >UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD Length = 901 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 126/427 (29%), Positives = 209/427 (48%), Gaps = 31/427 (7%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 P + ++V+ D+ + +L+ +AE K N+VV+ DVSG V++ L +VPW QAL Sbjct: 472 PQQARYRGKRVSFEFKDIDIQNLLRVIAEISKKNIVVADDVSGKVTIRLRNVPWDQALDL 531 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 V+++ L + GNI+ + + ++ + Q L + + YA A ++A Sbjct: 532 VLRTKALGKEEFGNIIRIAPLKTLEEEARLRQERKKSLQQQEDLMVNLLPVNYAVAADMA 591 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 + +LS +GS+TVD+RTN L+++D ++ V +D QV + + IV N Sbjct: 592 ARVKDVLSERGSVTVDQRTNVLIVKDVRSNTERARSLVRSLDTQTPQVLIESRIVEANTS 651 Query: 194 SLRELGVKWTLADAQHAGGVGQVT------------------------TLGSDLSVATA- 228 R LGV+W +L T Sbjct: 652 FSRSLGVQWGGQARAGQATGNSTGLIFPNNLAVTGGVTGTGAGLPDNPNFAVNLPTGTGQ 711 Query: 229 --TTHVGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 +GF G G L L+L LSA E + + I++P++ A I QG IP+ Sbjct: 712 GVGGAMGFTFGSAGGALQLNLRLSAAENEGSVKTISAPKVTTLDNNTARINQGVSIPFSQ 771 Query: 286 SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQE 345 +S + T+ F EA L +EVTP + Q G + + ++ S N P A+G+ +I ++E Sbjct: 772 TSAQGVNTT--FVEARLSLEVTPHITQDGSVLMSINASNNQPDPSSTGANGQ-PSIQRKE 828 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 TQV VK G+T +GGI+ R+ + +SVP L IP G LF+++ + D R+EL++FIT Sbjct: 829 ANTQVLVKDGDTTVIGGIYVRRGATQVNSVPFLSRIPVLGLLFKNNSETDTRQELLIFIT 888 Query: 406 PRLVSSE 412 PR+++ + Sbjct: 889 PRILNRQ 895 >UniRef50_B8GPV1 Type IV pilus secretin PilQ n=5 Tax=Chromatiales RepID=B8GPV1_THISH Length = 711 Score = 361 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 135/418 (32%), Positives = 228/418 (54%), Gaps = 30/418 (7%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 ++++L D+ V VLQ +A+ LN+VVS V+G ++L L +VPW QAL +++S Sbjct: 293 TYTGERLSLNFQDIEVRSVLQLIADFTDLNVVVSDSVTGNITLRLRNVPWDQALDIILRS 352 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL R+ GN++ V + + + + PL I + YA A ++A Sbjct: 353 KGLGMREAGNVIFVAPTEEIAAREKLEMESRKQVEELAPLRAEFIQVNYARADDVASIIR 412 Query: 138 ----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 LS +GS+TVD RTN LL++D + L+ + + + ++D+PV QV + IV ++ Sbjct: 413 SDRTTFLSDRGSLTVDNRTNTLLVQDTEAKLADIRRLIDRLDIPVQQVLIETRIVIASDD 472 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLS---------------------VATATTHV 232 R+LG ++ + G TT + ++ + + Sbjct: 473 FARDLGARFGVTGVGQTGRTQTFTTGNLSGTTEMIRGDELSLLNRLNTNLPVISPSAGSI 532 Query: 233 GFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 +I R + LLDLE+SAL+ + + +II+SPR++ ++ Q A I+QG IPYQ ++ SGA Sbjct: 533 ALSILRPD-VLLDLEISALQVEGRGEIISSPRVITANGQTARIQQGERIPYQEATS-SGA 590 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 T+V+F EAVL EVTP + G I L + ++++ PG ++ Q +I+ +E+ETQV V Sbjct: 591 TAVQFIEAVLATEVTPQITPNGNIILNIRVNKDNPGTLVVQG---TPSIETREVETQVFV 647 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 ++GET+ LGG++ + + VP GD+P LFR GK + EL++F+TP+++ Sbjct: 648 RNGETVVLGGVYEIDSLETLEKVPFFGDLPGIRHLFRRTGKSTRKAELLIFVTPKVIE 705 >UniRef50_Q0VMB7 Fimbrial assembly protein pilQ n=3 Tax=Gammaproteobacteria RepID=Q0VMB7_ALCBS Length = 723 Score = 361 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 143/451 (31%), Positives = 223/451 (49%), Gaps = 67/451 (14%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 +K++L D+ V VLQ +A+ LNLV S V G ++L L +VPW QAL+ ++K+ GL Sbjct: 275 GEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVDGRITLRLQNVPWDQALELILKTKGL 334 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA----- 135 RQ GN+L V + Q + +A PL I + YA+A EL + Sbjct: 335 DKRQVGNVLLVAPADEIAAREQLELESQKKIEALAPLRTEYININYANASELKELISNAG 394 Query: 136 --GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 GE L+S +GS+ VD+RTN L+++D + L + + + Q+D+PV QV + A +V Sbjct: 395 GKGEALVSGRGSVVVDQRTNTLIVQDTQAKLQEIRELIDQLDIPVQQVLIEARVVVATND 454 Query: 194 SLRELGVKWT---------LADAQHAGGVGQVTTL------GSDLSVATATTHVG----- 233 E GV+W L D + G G++ +L D ++A T G Sbjct: 455 VTDEFGVRWGGLGFDTESMLEDGRTFGVSGRLQSLRNLHQTNIDATIAYPDTVGGHPGDV 514 Query: 234 ---------------------------------FNIGRINGRLLDLELSALEQKQQLDII 260 + L++LELSALE + +++ Sbjct: 515 EFGPDDFQFQEAENDDDLIVDLGVDSASASRFAVGFTSLASGLIELELSALEAEGHGELV 574 Query: 261 ASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKL 320 A+P++L + QPA I G ++P+++++ SGATS++F EA L +EVTP + G I + L Sbjct: 575 ATPKVLTADQQPAVIASGQQVPFEIATS-SGATSIDFVEAELRLEVTPHITPDGNIIMML 633 Query: 321 HISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGD 380 ++ + A I+ +ET V V GET+ LGGIF ++ + P LGD Sbjct: 634 KVNNDSFSSDGSAA------INTNRVETSVLVNDGETVVLGGIFQQEKINSVTKTPFLGD 687 Query: 381 IPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +PW G LFR D ++EL++FITPRL+ Sbjct: 688 LPWIGALFRKTVNRDNKQELLIFITPRLMKD 718 >UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTT2_9GAMM Length = 721 Score = 359 bits (923), Expect = 8e-98, Method: Composition-based stats. Identities = 132/433 (30%), Positives = 235/433 (54%), Gaps = 43/433 (9%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 ++++L D+ V VLQ +A+ LN+VVS VSG+++L L +VPW QAL+ ++K+ GL Sbjct: 285 GERLSLNFQDIEVRSVLQLIADFTGLNVVVSDSVSGSLTLRLKNVPWDQALEIILKTKGL 344 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK-- 138 R+ GN+L + + + Q PL++ + +A A ++ + Sbjct: 345 DKRKSGNVLLIAPAEEIAQQEKLALEAKQQVQELAPLQSEFFEVNFAKAEQILNLIKGKS 404 Query: 139 ---------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 LLS +G+ TVD RTN L++ D + + + ++D+PV QV + Sbjct: 405 EDGEGQSEGDSKSSGLLSERGTATVDARTNTLMVTDTAVVMEQIRSMLQRLDIPVKQVLI 464 Query: 184 SAHIVTINEKSLRELGVKWTLAD---------------------AQHAGGVGQVTTLGSD 222 + IV ++ ++LG ++ + + +GG + + + Sbjct: 465 ESRIVIASDDFDKQLGSRFGVNRIDPLPVGEGAVFGGSDTFNLQGRQSGGDLNINSRPMN 524 Query: 223 LS----VATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQG 278 + ++T F + +G LL+LELSAL+ + + +II++PR++ ++ + A I+QG Sbjct: 525 FNFPANAGSSTGQFAFALPTSSGNLLELELSALQAEGKGEIISTPRVITANQKEAFIEQG 584 Query: 279 SEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV 338 EIPY + + SGA +V FK+AVL + TP + RI L L++ ++ G++ + + +V Sbjct: 585 VEIPY-LEAASSGAVTVAFKKAVLSLTATPQITPDDRIILDLNVKKDNVGEIFGEGEIQV 643 Query: 339 LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR 398 +ID +E+ETQV VK+GET+ LGGIF + +P LGDIP G+LFR + K++ +R Sbjct: 644 PSIDTREVETQVLVKNGETVVLGGIFEHETLDSVTKIPFLGDIPGIGRLFRREIKQNSKR 703 Query: 399 ELVVFITPRLVSS 411 E+++F+TP++V Sbjct: 704 EILIFVTPKIVRD 716 >UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHB7_9DELT Length = 1125 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 123/427 (28%), Positives = 206/427 (48%), Gaps = 39/427 (9%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + + + + + D P+ VL ++ ++N++ P+V GTV++ L+ VPW QAL +++S Sbjct: 695 RGEPIDIELQDAPIKDVLLLFSDIGRVNIIAGPEVQGTVTMKLSAVPWDQALDIILRSLN 754 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 L QEGN++ V + A + + E PLE R I+L YAD G++ + + Sbjct: 755 LGMVQEGNVIRVATQATLEDERRKAIEEANARVQLKPLETRLISLSYADVGDMLPKVQSV 814 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 LS++G++T D RTN L++ D ++ E V Q+D QV + A IV LR+LG Sbjct: 815 LSSRGTVTPDTRTNTLIVMDVAENIALAESLVRQLDSQTPQVLIEARIVEARTNWLRQLG 874 Query: 200 VKWTLADAQHAG--------------------------------GVGQVTTLGSDLSVAT 227 ++W G G DL Sbjct: 875 IQWGFDFVASPGTGNPTGLLFPNAIGIGGGSGSNQSPVNGLILPGAAANPNYAVDLPAVV 934 Query: 228 ATTH---VGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 T +GF+ G ++G L +L LSA E + + II++P+++ A I+QG +IP Sbjct: 935 GTGSGGALGFSFGSLSGNLNTNLRLSAAENEGDVRIISAPKIVTLDNTEAQIEQGVQIPI 994 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 S + T + A LG+ VTP V +G + L++ + +N V A G+ I Sbjct: 995 AQVSAQGVNT--RYVNATLGLRVTPQVTNEGAVLLEVEVQKNEADFVNTGARGD-PTILT 1051 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 + +Q+ + G+T +GGI+TR VP DIP G F++ + D+R E+++F Sbjct: 1052 KSARSQLLITDGDTAVIGGIYTRNQAINHSKVPWFADIPIIGWFFKNRTERDDRSEMLIF 1111 Query: 404 ITPRLVS 410 +TPR+V+ Sbjct: 1112 LTPRIVN 1118 >UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobacillus RepID=B5EP42_ACIF5 Length = 784 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 135/475 (28%), Positives = 222/475 (46%), Gaps = 82/475 (17%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 ++++ ++ V LQ +A+ N+VVS +V+G++S+ L + PW+QA Q +++ Sbjct: 297 NPNAGARLSMDFQNISVRDALQVIADFTHQNIVVSNNVTGSLSIRLKNEPWEQAFQVILQ 356 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 S GL + GNIL V + + Q A + PLE I ++YA A E+A Sbjct: 357 SQGLAVKHIGNILWVAPASQITSQEEAQLKADASKRKLEPLETELIRIRYAKASEIASLL 416 Query: 137 E---------------------------------------KLLSAKGSMTVDKRTNRLLL 157 + LL +GS+ V RTN LL+ Sbjct: 417 QGFDQNKEPGGGETGNEMNPAQNAALASALGIPNSSLIGNSLLGPRGSVAVVTRTNSLLV 476 Query: 158 RDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT----------LADA 207 RD ++ ++ +A++D PV QV + A IV + + + LGV W + + Sbjct: 477 RDTPQDIANIKHLIAKIDRPVPQVLIEARIVQVTTSAAQSLGVNWGGTYTSGGGGGIVNL 536 Query: 208 QHAGGVGQVTTLGSDLSVATA-----------------------------TTHVGFNIGR 238 G G +T G ++ +GF +G Sbjct: 537 SGTGATGVTSTQGGAYPMSGTTTTTGTGFTTPALVNLVPSTAGTALASMNPASLGFALGT 596 Query: 239 ING-RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 G R+L+L+L AL+ + II+SP++L + A I+QG EIPYQ ++ SGAT+V F Sbjct: 597 AAGNRILNLQLQALQADNRAKIISSPKVLTQDNEKAVIEQGQEIPYQQATS-SGATAVSF 655 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 K+AVL ++VTP + G+I L + + P G + I+ Q+++T++ V +G+T Sbjct: 656 KKAVLSLDVTPHISPNGKITLDVDARNDQPNYAQAMPSG--IPINTQQVKTKLLVNNGQT 713 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + +GGI+T + VPLL DIP G LF+ + EL+VF+TP++V E Sbjct: 714 VVIGGIYTDSTTQNETGVPLLRDIPLLGWLFKSHINSVAKTELLVFLTPKVVGGE 768 >UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2K0_9PROT Length = 688 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 134/406 (33%), Positives = 211/406 (51%), Gaps = 20/406 (4%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K+TL ++ + L +A+ LN+V+S VSG ++L L DVPW QAL +++S Sbjct: 281 YAGEKLTLNFQNISTREALSVIADFTGLNMVISDTVSGNLTLRLKDVPWDQALDIILQSK 340 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 GL R+ GN++ V + A + PL S L YA A ++A + Sbjct: 341 GLDMRKNGNVIQVAPREEIASKEKLDFASRQEIGDLEPLRTESFQLSYAKALDIANLLKN 400 Query: 139 ----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 LLS +GS D RTN L ++D T L + +V Q+D+PV QV + A V E Sbjct: 401 KDTGLLSKRGSSVSDLRTNTLFVQDTPTRLEEVRTFVKQLDVPVRQVMIEARFVEAGETF 460 Query: 195 LRELGVKWTLADAQHA----------GGVGQVTTLGSDLSVATATTHVGFNIGRING-RL 243 + LG + + G ++T + T + N+ ++ Sbjct: 461 NQTLGGRLSYTGPGSTVAGGGFAGPAGNRAALSTTSLLPGAGSVTGGMTLNLFNAAATKV 520 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLG 303 L LEL+A E IASPR++ PA+I+ G E+PY ++ SGATSV FK+AVLG Sbjct: 521 LTLELNASELDGTTKNIASPRVVTGDKTPATIESGVEVPYLQATS-SGATSVAFKKAVLG 579 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 + VTP + + +KL +SQ+ G + V +I+ ++++TQV V +G T+ +GG+ Sbjct: 580 LTVTPQITPDDHVGMKLSVSQDTVGNIYSG----VPSINTKKVDTQVLVDNGGTVVIGGV 635 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +T+ ++ +PLLGDIP G LF+ D ++EL+VFITP++V Sbjct: 636 YTQDATDSKEQIPLLGDIPILGWLFKTDTIVKAKKELLVFITPKIV 681 >UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisseriaceae RepID=C0DV38_EIKCO Length = 707 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 137/418 (32%), Positives = 219/418 (52%), Gaps = 29/418 (6%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 ++V+L DV V +LQ LA++ +N+V S VSG ++L L DVPW QAL V++S GL Sbjct: 287 GKRVSLDFQDVDVRTILQILAKESNMNIVASDSVSGKMTLSLKDVPWDQALDLVMQSRGL 346 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE--- 137 +R+ GNI+ V R + PL +R+ L+Y D E K Sbjct: 347 ESRRNGNIIRVAPAEEFRKIDVETLENAKRIEELGPLVSRTFQLKYKDVNEFRKILNISD 406 Query: 138 ------------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 LLS++GS +D TN L+++DN+ + E+ + Q+D+P QV + A Sbjct: 407 TGSSGGSGNNNNTLLSSRGSAVIDPATNTLIIKDNQNVIKEFERLIEQLDVPARQVMIEA 466 Query: 186 HIVTINEKSLRELGVKWTLADAQH----------AGGVGQVTTLGSDLSVATATTHVGFN 235 IV N+ R LGVK+ G G ++ ++++ + Sbjct: 467 RIVEANDGFSRALGVKFGYNKTSGSTRIGSGLGSGGANGNTFSIAPNVNLPAISATSSIT 526 Query: 236 IGR-INGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 I R ++ L LEL+A++++ + II+SPR+L + A+IK G EIPYQ +S ++ Sbjct: 527 IVRALSSGALGLELTAMQEQNRGKIISSPRVLTQDRKEATIKAGREIPYQEASSSGATST 586 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 FKEAVLG+ VTP + G + + + ++++ + I+ +E+ T+ V+ Sbjct: 587 -SFKEAVLGLTVTPQITPDGNVIMDIKLNKDSVDENCSVLG--TPCINTKELVTRAMVED 643 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G T+ LGGI+ +N + Q VPLLGDIP G LFR + + + EL++FITPR++ SE Sbjct: 644 GGTIILGGIYEEENSNSQYKVPLLGDIPVVGNLFRGTRRNNSKNELLIFITPRIMGSE 701 >UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas intermedia K12 RepID=C7HZW7_THIIN Length = 752 Score = 357 bits (916), Expect = 5e-97, Method: Composition-based stats. Identities = 143/464 (30%), Positives = 230/464 (49%), Gaps = 78/464 (16%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 QK++L ++ V +LQ A+ LN+VVS V+G ++L L DVPW QALQ ++++ GL Sbjct: 289 GQKLSLNFQNIDVRSLLQVFADFTHLNVVVSDSVTGNLTLRLKDVPWDQALQVILRAKGL 348 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG---- 136 R+EGN+L + + A P+++ + L Y A + Sbjct: 349 GERKEGNVLWIAPRDEILAREKADLEAKKSLSALEPVKSETFQLNYQKAATVVAMLTGAA 408 Query: 137 --------------------------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQW 170 ++LS +G++ D RTN++ + D + L + Q Sbjct: 409 GGAQSGTTATPSPVLLPGLSSSAAPTSRILSPRGTVLADPRTNQIFVTDIPSKLEEVAQL 468 Query: 171 VAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL---------GS 221 +A++D PV QV + A IV +++ R LGVK DA+ G T L G Sbjct: 469 IAKIDKPVRQVMIEARIVEASDQFGRSLGVKLGFLDARGIQGGVPGTNLVGGTYGTVSGD 528 Query: 222 DLSVATATTHVGFNIGRIN----------------------------------GRLLDLE 247 L VA T G + + R ++LE Sbjct: 529 YLGVANQTNQPGSSAATLADSQFVNLPAFGLAGSLLAGAAPSSLGISLFNAAANRFINLE 588 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 LSA+E + II+SPR++ + L A+I+QG+EIPYQ ++ SGAT+V FK+AVL ++VT Sbjct: 589 LSAMEADGKGKIISSPRVITADLSKATIEQGTEIPYQQATS-SGATAVTFKKAVLSLDVT 647 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 P + G + + + I ++ PG V +I+ + TQV+V++G T+ LGGI+T + Sbjct: 648 PQITPDGNVIMNVEIHKDSPGASTAG----VPSINTNTVTTQVQVENGGTVVLGGIYTSQ 703 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 ++ D VPLLGDIP G LF+++ K + EL+VF+TP++V++ Sbjct: 704 EQNQTDKVPLLGDIPVLGNLFKNNSKMYNKNELMVFLTPKIVTN 747 >UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7T3_CHRVI Length = 787 Score = 357 bits (916), Expect = 6e-97, Method: Composition-based stats. Identities = 142/479 (29%), Positives = 233/479 (48%), Gaps = 90/479 (18%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 ++++L D+ V VLQ LA+ LNLV S V G ++L L +VPW QAL ++K+ GL Sbjct: 308 GERLSLNFQDIEVRAVLQVLADFTDLNLVASDTVGGNITLRLKNVPWDQALDIILKTKGL 367 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG---- 136 RQ GN+L V + + + PL I + YA A ++A Sbjct: 368 AMRQNGNVLMVAPAQELAAQEQLEMESMQKIEELAPLRTEFIQVNYAKAADIAAVLSGAG 427 Query: 137 ---------------------------------------EKLLSAKGSMTVDKRTNRLLL 157 +LS +GS+T D+RTN L++ Sbjct: 428 RAASNPASPDARQTGTATRRDQVGASGLAQVAAAAGVSDRGILSPRGSLTFDERTNTLIV 487 Query: 158 RDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQV- 216 +D TAL + + V +D+ V QV + + +V N R+LGV++ ++ + G +V Sbjct: 488 QDTLTALEEVRRVVNLLDVAVRQVMIESRVVIANNSFARDLGVRFGVSGSMGKVGDNEVL 547 Query: 217 ------------------------------TTLGSDLSVAT-------------ATTHVG 233 +TL D AT A+ + Sbjct: 548 IGGGQNGYLAVGDYDSGPFGLNASTGTPYNSTLTDDAGNATLITNLPATTIQDAASGSID 607 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 F IG++ L+ LELSA++++ + +II+SPR++ + A+IK GSEIPYQ SG+ G T Sbjct: 608 FLIGKVGSYLIQLELSAMQREGRGEIISSPRVITADKNKATIKVGSEIPYQEQSGQ-GNT 666 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 S+ FKEAVL ++VTP + RI + L + ++ P ++ ID + ++T V + Sbjct: 667 SIAFKEAVLQLDVTPQITPDDRIIMDLEVRKDRPDW--SRSINNTPPIDTRSVKTNVVID 724 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 +GET+ LGG+F R+ ++ VP LGD+P G+LF+ + ++D EL++F+TP+++ S+ Sbjct: 725 NGETVVLGGVFEREKTFSKEQVPWLGDVPVLGRLFKQEARQDSNTELLIFVTPKILKSD 783 >UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein pilQ n=31 Tax=Bacteria RepID=PILQ_NEIG1 Length = 723 Score = 356 bits (915), Expect = 7e-97, Method: Composition-based stats. Identities = 134/424 (31%), Positives = 221/424 (52%), Gaps = 31/424 (7%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + +K++L DV + +LQ LA++ +N+V S VSG ++L L DVPW QAL V++ Sbjct: 295 KTFTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVSGKMTLSLKDVPWDQALDLVMQ 354 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + L RQ+GNI+++ + L +++ L+Y + E Sbjct: 355 ARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRSIL 414 Query: 137 E-----------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 L+S +GS+ +D TN L++ D ++ + + + ++D+P QV + A Sbjct: 415 RLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQVMIEA 474 Query: 186 HIVTINEKSLRELGVKWT------LADAQHAGGVGQVTTLG----------SDLSVATAT 229 IV + R+LGVK+ L + A G G + G +L VA A Sbjct: 475 RIVEAADGFSRDLGVKFGATGRKKLKNETSAFGWGVNSGFGGGDKWEAQTKINLPVAAAA 534 Query: 230 THVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS--S 287 + + I+ L+LELSA E + +A+PR+L + + A I+ G EIP+ V+ S Sbjct: 535 NSISL-VRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTVTTAS 593 Query: 288 GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIE 347 G +T+ E K+AVLG+ VTP + G+I + + I+++ P Q + +L I + + Sbjct: 594 GGGNSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCAS-GNNTILCISTKSLN 652 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 TQ V++G TL +GGI+ N + VPLLGDIP G LF+ GK+ +RREL++FITPR Sbjct: 653 TQAMVENGGTLIVGGIYEENNGNTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFITPR 712 Query: 408 LVSS 411 ++ + Sbjct: 713 IIDT 716 >UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular organisms RepID=B1Y305_LEPCP Length = 726 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 130/445 (29%), Positives = 218/445 (48%), Gaps = 58/445 (13%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 K++L + V +LQ +A+ N+V S V+G V+L L DVPW QAL ++++ L Sbjct: 279 GDKLSLNFQSIEVRSLLQVIADFTNFNIVTSDSVTGNVTLRLKDVPWDQALDIIMQAKSL 338 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE--- 137 ++ GN+L + ++ + + PL +S L Y A E+ K+ Sbjct: 339 GVKKAGNVLWIAPKDELAAKEKQELEARKQIADLEPLRTQSFQLNYTKAEEVVKSLTGQQ 398 Query: 138 -------------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELS 184 ++LS +GS + RTN+L + D + L + Q +A++D+PV QV + Sbjct: 399 QGSAGTGQGGNVTRILSQRGSAAYESRTNQLFVSDLPSKLEEVAQMIAKIDVPVRQVMIE 458 Query: 185 AHIVTINEKSLRELGVKWTLADAQHAGGV--------------GQVTTLGS--------- 221 A IV + R LGVK D + G G +++G Sbjct: 459 ARIVEAEDSFGRTLGVKLGATDLRGINGGVPGWGGNNTRIALGGNYSSIGDTTLQQATGS 518 Query: 222 ---------------DLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLL 266 L ATA T G + R L+LELSALE + + +++SPR++ Sbjct: 519 IYANSQFVNLPANTSSLGGATAATFALSLFGASSNRFLNLELSALEAEGKGKLVSSPRVV 578 Query: 267 ASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNV 326 + A I+QG+E+PYQ + A S+ F++A L +EVTP + +G I + + ++++ Sbjct: 579 TADQVKALIEQGTELPYQTGGNQQTAPSIAFRKATLKLEVTPQITPEGNIIMDVDVNKDS 638 Query: 327 PGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQ 386 GQ AI+ + ++TQV V++G T+ +GGIF + VP+LGDIP+ G Sbjct: 639 VGQQTLAG----FAINTKHVKTQVLVENGGTVVIGGIFETTETESVNKVPVLGDIPFLGV 694 Query: 387 LFRHDGKEDERRELVVFITPRLVSS 411 LFR+ + + EL+VF+TP++++ Sbjct: 695 LFRNKTRVANKTELLVFLTPKVITD 719 >UniRef50_B2K5T6 Type IV pilus secretin PilQ n=46 Tax=Enterobacteriaceae RepID=B2K5T6_YERPB Length = 500 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 187/393 (47%), Positives = 266/393 (67%), Gaps = 9/393 (2%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 VTL D PV+ +LQALA+ +LNL+ + V G +SL L +VPW+QAL +++ L Sbjct: 113 PVTLEFQDAPVSVILQALADYRQLNLITTTGVGGNLSLRLIEVPWEQALAIILRMGRLKA 172 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL--- 139 +EG ++ V + I ++ + A L N ++ LQYA+A ++A + + L Sbjct: 173 EREGTVMMVFT----EQEIQERQQRTKQQAAPEALANLTLALQYANAEQVADSLDPLQGG 228 Query: 140 -LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 LS GS+ DKRTN LL+RD +L+ L+ W+ +MDLP+ QV+LSAHIVTI+ + L+EL Sbjct: 229 LLSPLGSVVADKRTNTLLIRDTPASLALLKNWLIEMDLPLQQVQLSAHIVTISSEDLQEL 288 Query: 199 GVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 GV+W + + + + ++ +L + + VGF++ RI GRLL+LELSALEQ+ Q+D Sbjct: 289 GVRWGMGEGKGNTAL-RINDFNVNLPLPNSAASVGFHVARIGGRLLELELSALEQENQVD 347 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRL 318 IIASPRL+ SH Q ASIKQGS+IPY VS G+ A ++EFKEAVLGMEVTP +L+ G+I L Sbjct: 348 IIASPRLITSHQQTASIKQGSDIPYTVSRGKKEAAAIEFKEAVLGMEVTPKILRNGKIIL 407 Query: 319 KLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLL 378 L ISQN+PG +++ + E+L IDKQEI+TQV V GET+ LGGIF +K + + VPLL Sbjct: 408 DLKISQNMPGITIKRGESEMLLIDKQEIKTQVTVNDGETIVLGGIFQQKKRQSVNKVPLL 467 Query: 379 GDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 DIP G +FR D ++ RRELV+FITP+L+S+ Sbjct: 468 ADIPLLGAMFRQDTQQQSRRELVIFITPKLISA 500 >UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLX9_9GAMM Length = 702 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 131/417 (31%), Positives = 214/417 (51%), Gaps = 26/417 (6%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV 75 + +K+ L +V + VLQ +AE +LNLVVS V G ++L L +VPW QAL ++ Sbjct: 286 LFQFTGEKIDLNFQNVELRSVLQIIAEVAELNLVVSDTVGGNITLRLKNVPWDQALDIIL 345 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 K+ GL R GN+L + A ++ + + PL I + Y A E+ Sbjct: 346 KTKGLDQRTVGNVLLIAPAAEIAERERQELESSKQVEQLAPLRTEFIQVDYRKASEMMST 405 Query: 136 GE--KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 + K++S +G + D TN L++R+ TAL + + + D+ V QV + A +V Sbjct: 406 IQEAKMVSERGFVMADDETNVLMVRETATALRDIRNILKKFDVEVEQVLVEARLVNATSN 465 Query: 194 SLRELGVKWTLADAQHAGGVG-----QVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL 248 ++LGVKW G G + + + A T+++ ++G + + Sbjct: 466 VTKDLGVKWGFGYNDVDNGKGWIVDNSIGNVNFGNTTAGNTSNLMVDLGASVTSPGTIAI 525 Query: 249 SA--------------LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 LE + +I++ P++L ++ + A I+ GSEIPYQ E G S Sbjct: 526 GFKPGASSLLALELSALETDGKAEIVSQPKVLTTNGKQAKIESGSEIPYQTV--EDGEVS 583 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 +EFK+ VL ++VTP + RI + L I+Q+ GQVL + ++ID E++T V V Sbjct: 584 IEFKDVVLSLDVTPRINPGDRIAMDLLITQDSIGQVLPNGE---ISIDNNELQTTVVVPD 640 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G+T+ LGG+F + + VPLLGD+P G LFR+ + E+ EL++FITP+LV + Sbjct: 641 GQTIVLGGVFKNETSETINKVPLLGDLPIMGPLFRNKENQAEKTELLIFITPKLVRN 697 >UniRef50_A6GPK2 Pili assembly protein PilQ n=1 Tax=Limnobacter sp. MED105 RepID=A6GPK2_9BURK Length = 681 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 138/401 (34%), Positives = 224/401 (55%), Gaps = 15/401 (3%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 + +TL D + V+Q A+ K+NLV+S V G V++ L DVPW QAL V++S GL Sbjct: 287 GRPITLDFKDADIRTVMQVFADFTKMNLVLSDSVQGKVTVFLKDVPWDQALDIVMRSKGL 346 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE--- 137 ++ Q GN+L V + N+ Q A + PL ++ + Y +L + Sbjct: 347 VSSQAGNVLLVSTPTDVTNDQF-QTANRRAQDEMEPLVSKVFQVSYQKTADLVALIKSED 405 Query: 138 -KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 KLLSA+G++ D+RT+++ ++D T L + V +D PV QV + A +V + R Sbjct: 406 SKLLSARGTLISDERTSQIFVQDTPTRLERISMIVNGLDKPVKQVMIEARVVLADTSVSR 465 Query: 197 ELGVKWTLADAQHAGGVGQVT-TLGSDLSVATA---TTHVGFNIGRING-RLLDLELSAL 251 +LG++ A+ G +V GS V T T++G+ + N RL++L+L AL Sbjct: 466 DLGIRLRALSARADPGFDEVGDQFGSGNFVNTGVENATNLGYTLFNANSTRLINLQLRAL 525 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVL 311 E + ++ +++PR++ S+ +PA I+QG+EIPYQ+++ SGAT+ EFKEA L + VTP + Sbjct: 526 ELENKVRTVSNPRVITSNKEPALIEQGTEIPYQIATS-SGATATEFKEANLKLAVTPQIA 584 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 G + L + ++++ G AID + ++T+V V G T+ LGGIF + Sbjct: 585 PDGTVLLDVDVAKDSIGIETSNG----PAIDTRRVKTKVLVSDGGTVVLGGIFEEDDNVL 640 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 D P LGDIP G LFR + R EL++F+TP +++S+ Sbjct: 641 NDKTPFLGDIPGLGVLFRGKNESRRRAELLIFLTPVVLTSQ 681 >UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 Tax=Acinetobacter RepID=B2I0J4_ACIBC Length = 721 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 129/460 (28%), Positives = 220/460 (47%), Gaps = 70/460 (15%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 K++L D+ V +VLQ LA+ +N+V + V G ++L L DVPW QAL ++K+ Sbjct: 259 YSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTK 318 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA----- 133 L R+ GN++ + +A + A++ PL+ I L+YA AG++ Sbjct: 319 NLDKRRNGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAKAGDIMGLITQ 378 Query: 134 ------------------------------KAGEKLLSAKGSMTVDKRTNRLLLRDNKTA 163 LLS +G++T D RTN L++ D + Sbjct: 379 GSNNSNGLQHTSGGGTSTSTNLNTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQS 438 Query: 164 LSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVG--------- 214 + + + + +D+ V QV + A IV + +ELGVKW + Sbjct: 439 IDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGILSQGITNNNNLLVGGSETT 498 Query: 215 ---------------------QVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQ 253 + L DL V+ + F + ++ +LDLELSAL+ Sbjct: 499 LWNLREPKKDETTGGYKYTIERPDNLNVDLGVSNPAGSIAFGLISMSDFMLDLELSALQA 558 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES--GATSVEFKEAVLGMEVTPTVL 311 ++I++P+++ + Q A + G ++PYQ ++ + + FK+A+L + VTP++ Sbjct: 559 DGYGEVISTPKVMTADKQTAKVATGQQVPYQSTTNSAAGSTATTSFKDALLSLNVTPSIT 618 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 G+I++KL IS++ + L ++K I T V V +GET+ LGG+F + + Sbjct: 619 PDGKIQMKLDISKDSVAGAAPNGE---LILNKNNINTNVLVDNGETVILGGVFEQTTMNS 675 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 Q VP GDIP G+LFR D K D+++EL++F+TPR+V+ Sbjct: 676 QTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVND 715 >UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fastidiosa RepID=B2I8B2_XYLF2 Length = 636 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 125/438 (28%), Positives = 215/438 (49%), Gaps = 42/438 (9%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 Q + VT DVPV VLQ +A++ LN+V S V G V+L L +VPW QAL V Sbjct: 190 SAQGYSGRPVTFNFQDVPVRTVLQLIADESNLNIVASDTVQGNVTLRLINVPWDQALDIV 249 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +++ GL R++ ++ V +E + + L + + Y A + K Sbjct: 250 LRAKGLDKRRDEKVIWVAPQQELAKYEQEKEDARIAIENREGLITDYVQINYHSATVIFK 309 Query: 135 AG-------------------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 A + LS +G + D+RTN L++ D ++ + + +D Sbjct: 310 ALTEAKGMGGGGNGTPNNNSDDAFLSPRGRLVADERTNTLMISDIPKKVAQMRTLIQHID 369 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLA------------DAQHAGGVGQVTTLGSDL 223 PV QV + IV + R+LG K+ + + G T G ++ Sbjct: 370 RPVDQVLIEGRIVIATDSFARDLGAKFGVGAASRFSDNTATIGSNVTAGSSTSATRGLNV 429 Query: 224 SVATATTHVGFNIGRINGRLL------DLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 + T + + LL DLELSAL+Q+ + ++I++PR++ ++ + IKQ Sbjct: 430 DLGGPTNTTASVLPSLAYTLLGPKFNLDLELSALQQESRGEVISNPRIVTANQREGYIKQ 489 Query: 278 GSEIPYQVSSGE----SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQ 333 G EI Y +G +V+FKEAVL + VTPT+ R+ L + + ++ Q++ Sbjct: 490 GKEIGYVTITGGVAGGQATPNVQFKEAVLELRVTPTITNDNRVFLNMTVKKDEIDQMITI 549 Query: 334 AD-GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 A+ G V ++K+EI T V V G+T+ +GG++ +++ VP LGD+P+ G LF+ G Sbjct: 550 ANFGTVPTLNKREINTAVLVDDGQTVVIGGVYEFSDRNSVSKVPFLGDVPFLGNLFKKRG 609 Query: 393 KEDERRELVVFITPRLVS 410 K+ ++ EL++F+TP+++ Sbjct: 610 KDKQKAELLIFVTPKVLR 627 >UniRef50_Q21H82 Type II and III secretion system protein n=11 Tax=Gammaproteobacteria RepID=Q21H82_SACD2 Length = 727 Score = 354 bits (908), Expect = 5e-96, Method: Composition-based stats. Identities = 154/456 (33%), Positives = 233/456 (51%), Gaps = 66/456 (14%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 A K++L D+ V VLQ +A+ LNLV S VSG+++L L +VPW QAL V+K+ Sbjct: 272 AYVGDKLSLNFQDIQVRSVLQLIADFTDLNLVASDTVSGSITLRLENVPWDQALDLVLKT 331 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL----- 132 GL RQ G++L V A ++ Q + Q PL I ++YA+A EL Sbjct: 332 KGLDKRQVGSVLMVAPAAEIAARERQEIETQKQLQELAPLRTEYIRVRYANARELFNLFI 391 Query: 133 -------------------AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQ 173 + +LS +G VD+RTN ++L D + + + V + Sbjct: 392 DTSSGESGGAPGGSGSGSERNSTGSILSERGQAIVDERTNSIILTDTEEKIDDFRRLVDR 451 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKW-------TLADAQHAGGVGQVTTLGS----- 221 +D+PV QV + A IV N +ELGV+ +++ G++T L + Sbjct: 452 IDIPVRQVMIEARIVIANSDFRKELGVRMAGDAVETSVSGDTKFEMTGRLTGLTAADGSG 511 Query: 222 --------------------------DLSVATATTHVGFNIGRINGRLLDLELSALEQKQ 255 DL V +N+ N LL +ELSALE Sbjct: 512 PEALFVDTDGDGVTDDERSLLDSSLVDLGVFNPAGAFTWNVISSN-FLLGMELSALENSG 570 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGR 315 +I++ P+++ Q ASI+ G+EIPYQ S SG T+ FKEAVL +EVTP + R Sbjct: 571 YAEIVSQPKVITGDKQKASIESGTEIPYQEESA-SGGTTTSFKEAVLKLEVTPQITPDNR 629 Query: 316 IRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSV 375 + + L I+Q+ + A+ + ID ++ETQV V GET+ LGGI+T +G+ V Sbjct: 630 VIMDLVINQDSISSI--DANSGIPVIDITQLETQVLVADGETIVLGGIYTTNTFTGETKV 687 Query: 376 PLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 PLLGDIP+ G+LFR+D K +++RE+++FITPR+++S Sbjct: 688 PLLGDIPFVGKLFRNDFKSEDKREILIFITPRIMAS 723 >UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=Acinetobacter RepID=Q6F7E3_ACIAD Length = 723 Score = 353 bits (906), Expect = 7e-96, Method: Composition-based stats. Identities = 127/445 (28%), Positives = 225/445 (50%), Gaps = 57/445 (12%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 +K++L D+ V +VLQ LA+ +N+V + V G ++LHL DVPW QAL ++K+ L Sbjct: 276 GKKISLDFQDIEVRRVLQLLADFTNINMVTADSVQGNITLHLKDVPWDQALDIILKTKNL 335 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE--- 137 R+ GN++ + ++ + + A++ PL+ I L+YA A ++ K Sbjct: 336 DKRRNGNVIWIAPVSELIKSEEDEAKAIAQSTKLAPLQTEYILLKYAKAADIEKLITQGR 395 Query: 138 -----------------------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 LLS +G++++D RTN L++ D + + + + + Sbjct: 396 NSGTSNSNTNGSATVEPLGDSVGTLLSPRGTISLDPRTNTLIINDTSQKIDQIRKMIDLL 455 Query: 175 DLPVGQVELSAHIVTINEKSLRELGVKWTLA-------------------------DAQH 209 D+PV QV + A IV +E+GVKW + D+ Sbjct: 456 DIPVKQVMIEARIVRATTSFSKEMGVKWGILSQGINQNSNLLVGGSETTLWNLRNPDSNG 515 Query: 210 AGGVGQVTTLGSDLSV-ATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLAS 268 + + L DL V T + + F + ++ +LDLELSAL+ ++I++P+++++ Sbjct: 516 TYTIERPDNLNVDLGVTTTGASSIAFGLISLSDFMLDLELSALQADGYGEVISTPKVMSA 575 Query: 269 HLQPASIKQGSEIPYQVSSGES--GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNV 326 Q A + G E+PYQ ++ + + FKEA+L +EVTP + G+I ++L+I+ + Sbjct: 576 DKQKAKVATGVEVPYQSTTNSAAGSTATTSFKEALLSLEVTPNITPDGKILMELNIANDS 635 Query: 327 PGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQ 386 Q + ++K I T V V +GET+ LGG+F + + VP LGD+P+ G+ Sbjct: 636 INSYAQNGEA---ILNKNTINTNVLVNNGETVVLGGVFEQTTNNAVTKVPFLGDLPYVGR 692 Query: 387 LFRHDGKEDERRELVVFITPRLVSS 411 LF+ K + + EL++F+TPR+V+ Sbjct: 693 LFKKTAKSEAKNELLIFVTPRIVND 717 >UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderiales RepID=A1VK17_POLNA Length = 712 Score = 353 bits (906), Expect = 8e-96, Method: Composition-based stats. Identities = 131/425 (30%), Positives = 225/425 (52%), Gaps = 37/425 (8%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L ++ + +LQ +A+ N+V S V+G+V+L L DVPW QAL ++++ Sbjct: 288 FNGEKLSLNFQNIEIRSLLQVIADFTNFNVVTSDTVTGSVTLRLKDVPWDQALDIILQAK 347 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA----- 133 GL R+ GN+L + ++ + Q + +S + YA A E+A Sbjct: 348 GLGMRKTGNVLLIAPKDELAAKDKQELEARVAIQNLEAVRTQSFQINYAKASEIAVQISA 407 Query: 134 ----KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 ++LS +GS+ + RTN+L + D + L ++ ++A++D+ V QV + A IV Sbjct: 408 GGTGATTARILSNRGSVIAEPRTNQLFVTDIPSRLEQVQNFIAKLDIAVRQVLIEARIVE 467 Query: 190 INEKSLRELGVKW----------------------TLADAQHAGGVGQVTTLGSDLSVAT 227 ++ R LGV+ V+ S L VA Sbjct: 468 ASDTFGRSLGVRLGGGTIGAAGALTRGNTNVSLGTNYGATVADTSGNFVSFPASTLGVAN 527 Query: 228 ATTHVGFNIGRIN-GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 A + +I + R L+LELSALE + I++SPR++ + A I+QG+E PYQ + Sbjct: 528 AASSFAVSIFNASANRFLNLELSALEADGKGKIVSSPRVVTADQTKALIEQGTEFPYQTA 587 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 + SGATS+ F++A L +EVTP + +G I L L ++++ G+ +AID + I Sbjct: 588 TS-SGATSLAFRKANLKLEVTPQITPEGNIILDLDVNKDSRGETTAAG----IAIDTKHI 642 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 +TQV V++G T+ +GGIFT + + + VPLLGD+P+ G LF+ + ++E++VFITP Sbjct: 643 QTQVLVENGGTVVIGGIFTLEETNNEVKVPLLGDVPYLGNLFKSRERTSRKQEMLVFITP 702 Query: 407 RLVSS 411 ++++ Sbjct: 703 KMITD 707 >UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax=Methylophilaceae RepID=Q1GYG5_METFK Length = 723 Score = 352 bits (905), Expect = 9e-96, Method: Composition-based stats. Identities = 139/449 (30%), Positives = 230/449 (51%), Gaps = 62/449 (13%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L ++ V VLQ +A+ LN+V S V+G ++L L DVPW QAL ++ S Sbjct: 274 YAGEKLSLNFQNIDVRSVLQVIADFTGLNIVTSDTVTGNLTLRLKDVPWDQALDIIMSSK 333 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE----LAK 134 GL R+ GN++ V + + P+ TL+Y A ++ Sbjct: 334 GLTQRKTGNVIWVAPSDEVAAKEKLLLEASQQIEELEPMRTEVFTLRYQKAENFKNIISD 393 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + +K+LS +GS VD RTN + ++D L ++ + ++D+PV QV + + +V +EK Sbjct: 394 SKQKILSKRGSAVVDARTNTVFVQDTAKHLEEVQSIINKIDIPVKQVMIESRLVIADEKF 453 Query: 195 LRELGVKWTLADAQHAGG--VGQVTTLGS------------------------------- 221 R LG ++ + Q +G G TLG+ Sbjct: 454 GRSLGARFGVQKQQASGDTRYGSSGTLGNTITQRTVDPTTGVITETIANRVGSSTLATTS 513 Query: 222 -------------------DLSVATATTHVGFNIGRI-NGRLLDLELSALEQKQQLDIIA 261 +L VA A + F++ R+ G LL+LELSALE Q+ I++ Sbjct: 514 IPGTVGVGVSPDGAQDLNVNLPVANAFGNFAFSLFRLPAGFLLNLELSALETDQRGKIVS 573 Query: 262 SPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLH 321 SPR+ ++ Q A I+QG++IP+Q ++ SGAT+V+FK A L +EVTP + +I + L Sbjct: 574 SPRVTTANQQKAIIEQGTQIPFQQATS-SGATAVQFKNASLSLEVTPQITPDEKIIMDLE 632 Query: 322 ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDI 381 + ++ G V V +ID Q ++TQV V +GET LGGI+ + ++ D VP GD+ Sbjct: 633 VKKDKVGVVF----NNVPSIDTQRVQTQVLVANGETAVLGGIYEQTERNDVDKVPFFGDL 688 Query: 382 PWFGQLFRHDGKEDERRELVVFITPRLVS 410 P+ G +F+ K+ ++ EL++FITP+++ Sbjct: 689 PFLGNVFKRRVKQSDKTELLIFITPKVMD 717 >UniRef50_D0LHN1 Type IV pilus secretin PilQ n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHN1_HALO1 Length = 1269 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 129/420 (30%), Positives = 201/420 (47%), Gaps = 31/420 (7%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + + K+ L + +V + V++ LA+ +N+VV +VS V++ L VPW QAL+ ++ Sbjct: 844 RVYRGTKIDLDLQNVDIHNVMRLLADVGGINIVVPDEVSAEVTVRLRQVPWDQALEVILA 903 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 S GL R+EGN+ + + + + A E + TL YA A +L Sbjct: 904 SKGLWYRREGNLYRIATRKQLDAEAEAEAERIAALIKAEAPEPQIFTLNYAVASQLKPQL 963 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 E LLS KG + +D+RTN L++ D + + + + ++D Q+++ A IV R Sbjct: 964 EALLSPKGRIEIDERTNSLIINDVRAHRTRIIDLLTRLDTQTPQIQIEARIVEARSTFAR 1023 Query: 197 ELGVKWTLA------------DAQHAGGVGQVTTLGSDLSVATATTHVGF---------- 234 E GV+W + + GG T+G+ ++ A+ V Sbjct: 1024 EFGVQWGGSLLDANTGLVFPGNYGVVGGNTDSQTVGTGVAAASPDFAVNLPAATGTGAGG 1083 Query: 235 -----NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 G L L LSALE + II++P++ + A I QG IP V S Sbjct: 1084 ALGFAFGSVGGGLNLTLRLSALEDTGTVRIISAPKITVLNNVEAEISQGVSIPISVISAN 1143 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKG-RIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 T +F +A L +EVTP V Q+ I + L I +N V A G+ I ++E T Sbjct: 1144 GVQT--QFVQADLSLEVTPHVSQRDCSIAMDLQIQKNEADFVNTGARGD-PTILRKEAST 1200 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 V V ET +GGI+TR + VP LGD+P G LF++ + DER E++VFITPR+ Sbjct: 1201 TVLVADNETTVIGGIYTRNSGLSYSKVPFLGDLPLLGWLFKNRRENDERTEVLVFITPRI 1260 >UniRef50_Q0AF45 Type IV pilus secretin PilQ n=3 Tax=Nitrosomonas RepID=Q0AF45_NITEC Length = 720 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 132/422 (31%), Positives = 217/422 (51%), Gaps = 40/422 (9%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 +K++L DV + +LQ +A+ LN++ S V G ++L L DVPW QAL V++++ L Sbjct: 295 GEKLSLNFQDVEIRSILQVIADFTDLNIIASDSVKGNLTLRLKDVPWDQALDIVLQTSDL 354 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 R+ GN++ + Q + + L+ + L Y A + + +L Sbjct: 355 DKRRVGNVIFIAPREEMAARERLQLEQNQQITELEVLQTEAFRLNYRTASSIP--LKGIL 412 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S +GS+ VD +N L + D T L+ + + VA +D V QV + IV + R LG Sbjct: 413 SQRGSVEVDDISNTLTVTDIPTRLAEVARHVANLDTQVRQVMIETRIVEATDTFSRNLGA 472 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI--------------------- 239 ++ + +A G LG ++ ++ I Sbjct: 473 RFGVQNATRIGSQTNGRRLGISGNLGNSSELAAGTISPSGGDNLNVNLPAAALAGVAGGP 532 Query: 240 -----------NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 NG L++LELSALE Q IIASPRL+ ++ ASI+QG+EIP+Q S Sbjct: 533 AALGLSLIKINNGTLINLELSALESDSQGRIIASPRLVTANRVEASIEQGTEIPFQTISV 592 Query: 289 ESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 ++FK+AVLG++VTP + I +KL ++Q+ G+ AID ++I T Sbjct: 593 TR--PQIQFKKAVLGLKVTPQITPDDNIIMKLQVNQDTRGESTPAG----PAIDTKQIVT 646 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 +V V++G T+ +GGIF + K ++ +PLLGD+P G LF++ K D++REL++F+TPR+ Sbjct: 647 EVLVENGGTVVIGGIFEQVEKRDRNQIPLLGDVPLLGNLFKNTAKRDDKRELLIFVTPRI 706 Query: 409 VS 410 ++ Sbjct: 707 LN 708 >UniRef50_Q60BY4 Fimbrial assembly protein PilQ n=1 Tax=Methylococcus capsulatus RepID=Q60BY4_METCA Length = 729 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 143/437 (32%), Positives = 229/437 (52%), Gaps = 50/437 (11%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 ++++L D+PV VLQ LA+ LN+V S V G+V+L L +VPW +AL V+K+ Sbjct: 290 FAGERLSLNFQDIPVRNVLQILADFTNLNIVASDSVQGSVTLRLNEVPWDEALDLVLKAK 349 Query: 79 GLITRQE--GNILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELAKA 135 GL RQE N++ V + + N R E E + +L PL I + Y A ++ K Sbjct: 350 GLGKRQEANSNVIRVAPL-DEINRSERDELEALKVVEDLEPLRTEIIQINYTKADDIKKV 408 Query: 136 G--------------------------------EKLLSAKGSMTVDKRTNRLLLRDNKTA 163 + +LS++G++T D RTN+L+++D Sbjct: 409 IMGTTEKAEKAITRPEALTGGPGVTSTEAYDVTQSILSSRGNVTTDPRTNQLIVQDTPRN 468 Query: 164 LSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW-----TLADAQHAGGVGQVTT 218 L + V Q+D PV QV + + +V N LRELG K L A+ G + Sbjct: 469 LERIRDLVRQLDKPVRQVMIESRVVIANVDFLRELGAKLDFRPKNLTAAERLNPTGSMAD 528 Query: 219 LGSDLSVATATTHVGFN--IGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK 276 LG DL+ T + G + + LLDLELSA +++ + +I+A+PR+L + A I Sbjct: 529 LGVDLAKLTTLSPYGTAQYVVSMGDYLLDLELSAAQKEGRGEIVANPRVLTADQSKAKIM 588 Query: 277 QGSEIPYQVSSGESG----ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQ 332 QG E+PYQ++ +G +V FK AVL ++VTP + I + L + ++ G++ Sbjct: 589 QGVELPYQITQQGTGGGIPVQNVAFKPAVLELDVTPHITPDDHILMDLMVKKDDKGELAP 648 Query: 333 QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 + AI+K+EI+T +V +GET+ LGG++ ++ D VP GD+P G +FR + Sbjct: 649 NGN---FAIEKREIDTVAQVANGETVVLGGVYEGTRRNNTDKVPFFGDLPGIGFMFRRNA 705 Query: 393 KEDERRELVVFITPRLV 409 ED ++EL++FITP++V Sbjct: 706 VEDRKKELLIFITPKIV 722 >UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS Length = 700 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 128/423 (30%), Positives = 210/423 (49%), Gaps = 33/423 (7%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 ++++L ++ V VLQ LA++ +N+V S V G ++L L DVPW QAL V+ + L Sbjct: 274 GKRISLDFQNIEVRTVLQILAQESGMNIVASDSVQGKMTLSLKDVPWDQALDLVMDARNL 333 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE--- 137 R+ GNI+++ + + + + L +++ L+Y + E Sbjct: 334 DMRKHGNIINIAPRQELLDKDRNEAKARREMEDLGALYSKTFQLKYKNVEEFKNILRLSD 393 Query: 138 --------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 +LS +GS +D TN L++ DN++ + E+ + ++D+P QV + A IV Sbjct: 394 SPNTNDRSNILSTRGSALIDPATNTLIVTDNQSVIQKFERLIDELDVPAKQVMVEARIVE 453 Query: 190 INEKSLRELGVKWTL--ADAQHAGGVGQVTTL--GSDLSVATATTHVGFN---------- 235 + R LGVK+ A GG + + T+T V FN Sbjct: 454 AADGVSRSLGVKFGARRNGATSWGGDWNNSIALNNRSTNSGTSTGGVAFNPNVNLPVASA 513 Query: 236 ------IGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 I L LELSA+E + I++PR+L + A I+QG++IPY S + Sbjct: 514 TSSISVIHSWAAGALGLELSAMETENLTKTISTPRVLTQDRKEAEIRQGTQIPYTTRSSD 573 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 G +S FK+AVL ++VTP + +I L + I+++ P A+GE I + ++TQ Sbjct: 574 -GDSSTAFKDAVLSLKVTPRITPDSKIILDIAINKDEPDYNNVNAEGE-PGIVTRAVKTQ 631 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ++ G TL +GGI+ + + VPLLGDIP G LF+ + R EL+ FITPR++ Sbjct: 632 AMIEDGATLVVGGIYQEQMANNVSKVPLLGDIPVLGNLFKSRSRSRSRNELLFFITPRIM 691 Query: 410 SSE 412 +E Sbjct: 692 GAE 694 >UniRef50_Q1YS04 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=Gammaproteobacteria RepID=Q1YS04_9GAMM Length = 754 Score = 349 bits (897), Expect = 9e-95, Method: Composition-based stats. Identities = 161/466 (34%), Positives = 232/466 (49%), Gaps = 76/466 (16%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 A +++TL D+ V VLQ +AE LNLV S V+G ++L L DVPW QAL+ ++K+ Sbjct: 288 AFNGERLTLDFQDIEVRSVLQIIAEFTSLNLVASDTVTGNITLWLDDVPWDQALEIILKA 347 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL----- 132 GL RQEGN+L V A Q + Q PLE + ++YADA E+ Sbjct: 348 KGLDKRQEGNVLMVAPAAEIAEQERLQVEANKQLQELAPLETTFVRIKYADAAEIFELFT 407 Query: 133 ---------------AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 A +LS +GS VD+RTN ++L D + ++A ++ + ++D+P Sbjct: 408 ASRGDEGQSSSGGREGNATTTILSERGSAIVDERTNTIILTDTEDKINAFKRLIDEIDVP 467 Query: 178 VGQVELSAHIVTINEKSLRELGVKWTLAD-----AQHAGGVGQVTTLGSDLSVATATTHV 232 + QV + A IV N +ELGV W LA G TLG + T Sbjct: 468 IKQVLIEARIVIANTDFKKELGVTWGLAGIEKLTGGTIGSPFGDKTLGFSGRRSGLTPGA 527 Query: 233 G----------------------------------------------FNIGRINGRLL-D 245 G F++G + L D Sbjct: 528 GVKETFTYSADEIETDDDGITTYTRNYDIGLGDSLAVDLGVDNPTGSFSLGYLTDNFLID 587 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGME 305 LELSALE +I++ P++L Q A IK G+EI YQ ++ SGATS+EFKEAVL +E Sbjct: 588 LELSALESDGFGEIVSQPKVLTGDKQQAVIKSGTEIAYQKATS-SGATSIEFKEAVLQLE 646 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 VTP + RI + L +SQ+ G + +ID +IETQ V +G+TL L GIF Sbjct: 647 VTPQITPDNRIIMDLLVSQDSVGAFTPTGE---PSIDITQIETQALVGNGQTLVLEGIFQ 703 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + +G D VPLLGD+P+ G+LFR+D + E+RE++ FITP+++ Sbjct: 704 TEEVNGTDKVPLLGDLPFLGKLFRNDLRNIEKREILSFITPKIIDD 749 >UniRef50_A7BUG3 Bacterial type II and III secretion system protein n=3 Tax=Gammaproteobacteria RepID=A7BUG3_9GAMM Length = 698 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 126/434 (29%), Positives = 222/434 (51%), Gaps = 42/434 (9%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEK--LNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + + Q V+ D+ V L L + LN+V S V G+++L L ++PW QAL + Sbjct: 268 RKYEGQLVSFNFQDIDVRAALTLLFDLPGVNLNMVASDVVKGSITLRLKNIPWDQALDII 327 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +++ L R+ GN+ + + R+ + + + + L I + YA A ++ Sbjct: 328 LEARELGMRKIGNVAMIDLKKNIDERKQRELSNKKKIKELESLYTEFIRINYAKAKDIEA 387 Query: 135 AGEK-----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 LS++G+++ D+RTN L+++D ++ + + +A++D PV QV + + IV Sbjct: 388 LLRTSGQHSFLSSRGNVSTDERTNTLIIQDTAAKIAEIRKLLAELDTPVRQVLIESRIVI 447 Query: 190 INEKSLRELGVKWT------------------------------LADAQHAGGVGQVTTL 219 N + LGVK+ + A G GQ Sbjct: 448 ANNNFSKALGVKFGYSANEDLGFGNGIVFGGKKGGDTTFSGGTGFSSDNTATGEGQGENF 507 Query: 220 GSDLSVATATTH-VGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQG 278 L A A VG IG+I LL LELSA++ + +II++PR++ + Q A I QG Sbjct: 508 IVSLPAAIANPAAVGLAIGKIGSYLLQLELSAMQSEGSGEIISNPRIITGNQQEAIITQG 567 Query: 279 SEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV 338 +EIPY +G V+FK+AVL ++VTP + R+ ++L + ++ PG + G Sbjct: 568 TEIPYVQQAGVGSVAQVQFKQAVLELKVTPQITPDDRVNMELAVKKDSPGVNI----GGN 623 Query: 339 LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR 398 L+IDK+E++T V V +GET+ LGG++ R + + +P D+P G+LF++ K D++ Sbjct: 624 LSIDKREVKTNVLVDNGETVVLGGVYERTRSNAINRIPFFADLPLIGELFKNRSKSDDKS 683 Query: 399 ELVVFITPRLVSSE 412 EL++F+TP+++ + Sbjct: 684 ELLIFVTPKILKEK 697 >UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae RepID=COME_HAEIN Length = 445 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 154/435 (35%), Positives = 244/435 (56%), Gaps = 29/435 (6%) Query: 1 MKQWI----AALLLMLIPGVQAAKPQ----KVTLMVDDVPVAQVLQALAEQEKLNLVVSP 52 MK++ L+ +P + A P+ + + + P+AQ L+ LA Q+ +NLV+ Sbjct: 1 MKKYFLKCGYFLVCFCLPLIVFANPKTDNERFFIRLSQAPLAQTLEQLAFQQDVNLVIGD 60 Query: 53 DVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQ 112 + +SL L ++ + LQ + KS L ++ I ++ + + + Sbjct: 61 ILENKISLKLNNIDMPRLLQIIAKSKHLTLNKDDGIYYLN-----GSQSGKGQVAGNLTT 115 Query: 113 ANLPLENRSITLQYADAGELAKAGEK----LLSAKGSMTVDKRTNRLLLRDNKTALSALE 168 L + ++ L +A A EL K+ LLS GS+T D R+N L+++D ++ ++ Sbjct: 116 NEPHLVSHTVKLHFAKASELMKSLTTGSGSLLSPAGSITFDDRSNLLVIQDEPRSVQNIK 175 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDL----- 223 + +A+MD P+ Q+ + A IVTI ++SL+ELGV+W + + + G+ Sbjct: 176 KLIAEMDKPIEQIAIEARIVTITDESLKELGVRWGIFNPTENARRVAGSLTGNSFENIAD 235 Query: 224 -------SVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK 276 + T + + +INGRLLDLELSALE++ ++IIASPRLL ++ + ASIK Sbjct: 236 NLNVNFATTTTPAGSIALQVAKINGRLLDLELSALERENNVEIIASPRLLTTNKKSASIK 295 Query: 277 QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG 336 QG+EIPY VS+ + SVEF+EAVLG+EVTP + + I L L +SQN PG + Sbjct: 296 QGTEIPYIVSNTRNDTQSVEFREAVLGLEVTPHISKDNNILLDLLVSQNSPGSRVAYGQN 355 Query: 337 EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDE 396 EV++IDKQEI TQV K GET+ LGG+F +D VPLLGDIP +LF + + + Sbjct: 356 EVVSIDKQEINTQVFAKDGETIVLGGVFHDTITKSEDKVPLLGDIPVIKRLFSKESERHQ 415 Query: 397 RRELVVFITPRLVSS 411 +RELV+F+TP ++ + Sbjct: 416 KRELVIFVTPHILKA 430 >UniRef50_Q5P5P1 Fimbrial type-IV assembly protein PilQ n=4 Tax=Betaproteobacteria RepID=Q5P5P1_AZOSE Length = 721 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 126/434 (29%), Positives = 215/434 (49%), Gaps = 44/434 (10%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L ++ V VLQ +A+ N++ S V G ++L L DVPW QAL ++++ Sbjct: 286 YSGEKLSLNFQNIDVRSVLQVIADFTNFNIITSDSVQGNLTLRLKDVPWDQALDIILQAK 345 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE----LAK 134 GL R+ GN++ + Q QA+ P++ S + Y A E L Sbjct: 346 GLDMRKTGNVIWIAPSEELAMREKLQLEAQAQIGDLEPVQTESFQINYHKAKEIFDFLKS 405 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + +LS +GS+ +D+R+N+L + D + L A+ + V ++DL QV + A IV N+ Sbjct: 406 KDQTMLSKRGSVVMDERSNKLFVTDVVSRLDAIRRLVGEIDLLPRQVMIEARIVEANKDF 465 Query: 195 LRE----------------LGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGR 238 R+ GG + T + +VA V G Sbjct: 466 ARDLGVRLGVGGVGGRTVGFDANGRPIRRATVGGGLENTGFNAGQTVAATDAQVATVPGG 525 Query: 239 IN---------------------GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 +N R L+LELSALE + I++SPR+L ++ A I+Q Sbjct: 526 LNVNLPAPGGSGVLSAVLWNNTATRFLNLELSALESDGRGRIVSSPRVLTANQVEAVIEQ 585 Query: 278 GSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE 337 G++IPY + SGA S++F++AVL ++V P + +GR++L + ++++ P Sbjct: 586 GTKIPYPEKTS-SGAASIKFEKAVLSLKVKPQITPEGRVQLFVLVNKDRPDFARSVEG-- 642 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 + + I+T+V V++G T+ +GGI+ + +PLLG++P G LFR+ K +R Sbjct: 643 TPTVVTKNIQTEVLVENGGTVVIGGIYEEEETDSVTRIPLLGEVPLVGALFRNTIKNSKR 702 Query: 398 RELVVFITPRLVSS 411 EL++FITPR+V+ Sbjct: 703 SELLIFITPRIVAD 716 >UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9K2_BURGB Length = 649 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 133/435 (30%), Positives = 210/435 (48%), Gaps = 49/435 (11%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++++L + P+A V A A ++V+S V G +L L DVPW+ A ++ + GL Sbjct: 202 RRISLDLQQAPLAAVFDAFARFTGQSIVLSGRVQGAATLRLRDVPWRDAFDALLDANGLA 261 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA------KA 135 + G ++ V +A + AR A PL +R+ L+Y A ++A A Sbjct: 262 MARRGGVIWVAPVAELAARERARFETHARTAALEPLASRAFVLRYPRAKDVARLLTGGAA 321 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 G+++LS +GS+ D RTN L + D L+ + +AQ+D P QV + A IV Sbjct: 322 GQRVLSRRGSVLADPRTNLLFVTDLDGRLAQIAALLAQLDRPSRQVLIEARIVEGERGFS 381 Query: 196 RELGVKWTLADAQ------------------------------HAGGVGQVTTLGSDLSV 225 RELG + L + G V G L Sbjct: 382 RELGARLALRSSAWGGSRAGAGAGGSGGSDGGAGGAAMPDSNPGGAATGIVGGPGGRLLD 441 Query: 226 ATATTHVGFNIGRIN--------GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 +A GF RLLDLELSALE + + I++SPR++ + PA I+Q Sbjct: 442 LSARPLAGFEAATAGLTLFVAGASRLLDLELSALEAQGRGRIVSSPRIVTADRAPALIEQ 501 Query: 278 GSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE 337 G+E+PYQ G G + V+F+ A L +EV P + +G + L L ++++ G+ Sbjct: 502 GTELPYQAKVG-LGVSGVQFRRATLKLEVEPQITPEGHVVLDLDVAKDSVGESTDAG--- 557 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 AI + + T+VE+++G T+++GGI+ + VP+LG IP G LFRH + Sbjct: 558 -PAIHTKHVRTRVEIENGGTVSIGGIYESDRRDDVTRVPVLGKIPMLGALFRHRARRQRT 616 Query: 398 RELVVFITPRLVSSE 412 ELVV+ITPR+V ++ Sbjct: 617 AELVVYITPRVVGAQ 631 >UniRef50_Q1K2X4 Type II and III secretion system protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2X4_DESAC Length = 727 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 118/408 (28%), Positives = 206/408 (50%), Gaps = 20/408 (4%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + + VTL++DD + +V+Q +AE LN+++S DV G VSL L DVPW QAL ++ Sbjct: 326 KVYTGEPVTLVLDDADIRKVMQLIAEISNLNIILSDDVKGKVSLRLHDVPWDQALDLILD 385 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 L T +GN++ + + A + + + Y D + Sbjct: 386 VKQLGTITQGNVVRILPLGTIKKMEAERLKATKDIKKLEETRTEIFVINYKDTEAIEDVI 445 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 + +LS +G + + + + ++++ D + L + + Q+D PV QV + A IV + + + Sbjct: 446 DDVLSNQGEVQLIEGSKKIMVNDIPSKLEEIRMLINQLDEPVKQVLIEARIVEADTSAEQ 505 Query: 197 ELGVKWTLADAQHAGG---------VGQVTTLGSDLSVATAT-----THVGFNIGRINGR 242 G+ W +G V LG + T+ T + F ++ Sbjct: 506 TFGIHWGFEFDNDSGSSGGGIGSSLDNAVVGLGGNFITPTSATDGLGTALTFGRVGLDTI 565 Query: 243 LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVL 302 +LDL+LSALE +I+SP+++A + A I QG+EIPY+ +S T+ EFK+A L Sbjct: 566 VLDLQLSALESSGGGKVISSPKVMALDGETARIGQGTEIPYKTTS--DNGTTTEFKKAEL 623 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 +EVTP + I L++ + + PG +AI+ +E ET++ +K+GET +GG Sbjct: 624 ALEVTPLINPDNTILLEILATNSSPGVAYTDG----VAINTKEAETKLLLKNGETTVIGG 679 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 I+T ++ P L D+P+ G LF++ ++R EL++F+TP +V Sbjct: 680 IYTENEQNSDSGTPYLKDLPFIGNLFKYKTSSNDRTELLIFLTPHIVD 727 >UniRef50_A9GGP4 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP4_SORC5 Length = 774 Score = 343 bits (881), Expect = 5e-93, Method: Composition-based stats. Identities = 134/428 (31%), Positives = 215/428 (50%), Gaps = 42/428 (9%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 +++ L + D + VL+ +++ ++N+V + +VSGTV++ + +VPW QAL+TV+++ GL Sbjct: 344 GRRIDLDLKDADIHNVLRLISDVGRVNIVTADNVSGTVTIRMRNVPWDQALETVLQAKGL 403 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 ++GN++ V IA N A + PLE R I + YADA +L + +L Sbjct: 404 GVVRQGNMIRVAPIADLNKERELAIARRKSELQLAPLETRLIPINYADAKDLQDRSKDML 463 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S +GS+ VD+RTN L+ RD L+ +E+ V +D QV + A +V + +R++G+ Sbjct: 464 SPRGSLAVDERTNVLIARDVAGNLNQIEELVRSLDTQTPQVLIEARVVEATSRYVRDIGI 523 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTH----------------------------- 231 +W D + G T L ++ A Sbjct: 524 QWG-GDGTFSAATGNPTGLVFPSAIGIAGGATDSNSPTGGLSPFSSQVSNPNFAVNLPAI 582 Query: 232 --------VGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 +GF +G IN + L + LSA E L +++SPR+L + A I QG+ IP Sbjct: 583 VGAGQGGALGFTLGSINNTVNLGVRLSAAEASGMLRVVSSPRILTLDNREARISQGTLIP 642 Query: 283 YQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID 342 + S + T+ F+EA L + V P V G + + + I+++ P A G+ I Sbjct: 643 FSQISAQGVQTT--FQEAKLQLLVKPHVTSDGSVAMHVKINRDEPDFNQTSARGD-PTIL 699 Query: 343 KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 402 K+E ET + + G T +GGIFTR D VP GDIP G LF+ D R ELV+ Sbjct: 700 KREAETDLLIMDGHTAVIGGIFTRNTGRNLDQVPFFGDIPVLGLLFQRRRASDTRNELVI 759 Query: 403 FITPRLVS 410 F+TPR+V+ Sbjct: 760 FLTPRIVN 767 >UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadaceae RepID=Q2P6L4_XANOM Length = 649 Score = 342 bits (879), Expect = 9e-93, Method: Composition-based stats. Identities = 125/464 (26%), Positives = 219/464 (47%), Gaps = 68/464 (14%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + + VT DVPV VLQ +AE+ LN+V S V G V+L L +VPW QAL V Sbjct: 180 AARGYSGRPVTFNFQDVPVRTVLQLIAEESNLNIVASDTVQGNVTLRLMNVPWDQALDIV 239 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +++ GL R++G ++ V +E + + L + + Y +A + K Sbjct: 240 LRAKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNAAVIFK 299 Query: 135 AG--------------------------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALE 168 A LS +G + D+RTN L++ D ++ + Sbjct: 300 ALTEAKGIGGGGGSGGGQGGQGGAGQQDNGFLSPRGRLVADERTNTLMISDIPKKVAQMR 359 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG----------------- 211 + ++ +D PV QV + + IV + R+LG ++ + A G Sbjct: 360 ELISHIDRPVDQVLIESRIVIATDTFARDLGARFGIIGATGRGILSGSLDSNTNYLNTSA 419 Query: 212 -------GVGQVTTLGSDLSVATATTHVGFNIGRI-------------NGRLLDLELSAL 251 G TTL + L + ++G G + LD+ELSA+ Sbjct: 420 KRASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTNTPGGLAYTLLGSNFNLDIELSAM 479 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV----SSGESGATSVEFKEAVLGMEVT 307 +Q+ + +++++PR++ ++ + IKQG EI Y +G +V+FKE +L ++VT Sbjct: 480 QQEGRGEVVSNPRIVTANQREGVIKQGREIGYVTISGSGAGGGSQANVQFKEVLLELKVT 539 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQA-DGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 PT+ R+ L +++ ++ +++ G V I+++EI T V V GET+ +GG++ Sbjct: 540 PTITNDNRVFLNMNVKKDEVARLIDLPLYGTVPEINRREINTAVLVGDGETVVIGGVYEF 599 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 ++ VP LGDIP+ G LF+ G+ E+ EL+VF+TP+++ Sbjct: 600 TDRESVSKVPFLGDIPFLGNLFKKRGRSKEKAELLVFVTPKVLR 643 >UniRef50_Q1Q8Q7 Type II and III secretion system protein n=5 Tax=Moraxellaceae RepID=Q1Q8Q7_PSYCK Length = 792 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 137/447 (30%), Positives = 224/447 (50%), Gaps = 65/447 (14%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 +++ DV + VL LA+ ++N+V S V+G ++L L +VPW QAL ++KS L R Sbjct: 346 LSMEFQDVEIRSVLDILAQFTEMNIVASDSVAGNITLRLINVPWDQALDIILKSKNLGKR 405 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL----------- 132 + GN++ V AR+ Q ++ PL I L YA A ++ Sbjct: 406 ENGNVILVAPSTELAEQEARELEAQQAVESYAPLRTEYIRLSYAKAADVLTLISQGSGGA 465 Query: 133 ------------AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 K LLS +G++TVD+RTN L+++D ++ + + + ++D+PV Q Sbjct: 466 SGGSNTGSANANTKDSNSLLSNRGTVTVDERTNTLIVKDVAASIENIHKLIGKIDIPVRQ 525 Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVG-------------------------- 214 V + A IV+ + +E+GV+W + A Sbjct: 526 VMIEARIVSATDSFSKEIGVRWGILSNGAANNRNLLVGGSNQTLWDLKDFDVQTTTINGQ 585 Query: 215 ----------QVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPR 264 + L DL V + F + I+ +LDLELSA++ + ++I++P+ Sbjct: 586 TVSYPKYDITRPDNLNVDLGVDNPAGRIAFGLLGISDFMLDLELSAMQADNRGEVISTPK 645 Query: 265 LLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQ 324 +L S Q A + G++IPYQ +S SGAT+ FKEA L +E TP + G+I L+L I+ Sbjct: 646 ILTSDKQTAKVSSGTQIPYQEASA-SGATTTSFKEAALSLEATPNITPDGKIGLQLLITN 704 Query: 325 NVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWF 384 P + Q AI + I T V V+ G+T+ LGG+F + +G D VP LGD+P+ Sbjct: 705 GTPTIINNQV-----AIAEDSISTNVIVEDGQTIVLGGVFKNRTNNGVDKVPFLGDLPYI 759 Query: 385 GQLFRHDGKEDERRELVVFITPRLVSS 411 G+ FR D + + + EL++FITP+L++ Sbjct: 760 GRAFRKDVRSNTKEELLIFITPKLIND 786 >UniRef50_D0SET7 Type IV pilus biogenesis and competence protein pilQ n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SET7_ACIJO Length = 390 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 124/389 (31%), Positives = 204/389 (52%), Gaps = 30/389 (7%) Query: 48 LVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAE 107 +V S V G ++L L DVPW QAL ++K+ L R+ GN++ + +A + + Sbjct: 1 MVASDTVQGNITLRLKDVPWDQALDIIMKTKNLDKRRNGNVIWIAPVAELIKSEEEEAKA 60 Query: 108 QARAQANLPLENRSITLQYADAGELAK----------------------AGEKLLSAKGS 145 A++ P++ I L YA + ++ K A E LLSA+GS Sbjct: 61 IAQSIKLSPIQTDYIQLSYAKSADVLKLLEDSRDSKGGESNRTAGSDSLALESLLSARGS 120 Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 D RTN L++ D + + + + + +D+ V QV + A IVT + RELG+KW+ Sbjct: 121 AVSDSRTNTLIINDRQQNIDKIRRMIDLLDVAVKQVMVEARIVTASTDFSRELGIKWSAK 180 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHVG---FNIGRINGRLLDLELSALEQKQQLDIIAS 262 ++ G DL V AT G F + +I+ +L+LELSAL+ +++++ Sbjct: 181 KLGNSPVWGGDFQPSFDLGVDLATNTAGTFNFGLLKISDYMLNLELSALQADGHGEVLSA 240 Query: 263 PRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHI 322 P++L Q A I +G+EIPYQ S G + EF+ A L +EVTP++ G++++ L I Sbjct: 241 PKVLTGDKQKAYILRGTEIPYQTWSATEGLKT-EFRAANLKLEVTPSITPDGKVQMALKI 299 Query: 323 SQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIP 382 ++ G + I+ E+ET V V GET+ LGGIF ++ + VP GD+P Sbjct: 300 EKDTVGTLTSAG----YLINTNELETNVLVDDGETVVLGGIFDDIKQNQYEKVPFFGDLP 355 Query: 383 WFGQLFRHDGKEDERRELVVFITPRLVSS 411 G LF+++ + + EL++F+TPR+V+ Sbjct: 356 VVGALFKNNTRSSAQTELLIFVTPRIVND 384 >UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW26_DICNV Length = 734 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 135/443 (30%), Positives = 225/443 (50%), Gaps = 52/443 (11%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + + ++L D+ V VL +AE + N+VVS VSG ++L L +VPW QAL ++K Sbjct: 280 KVYTGEPLSLNFQDIEVRAVLNIIAEFTQQNIVVSDTVSGNITLRLDNVPWDQALDIIMK 339 Query: 77 SAGLITRQEGN-----ILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 + GL R+ GN I+ + + + Q +P++ I ++YA A + Sbjct: 340 TKGLAKRENGNDKTGRIIYIAPEKELDTAEIDALEGWQKKQQLMPMQTDFIRIKYAKASD 399 Query: 132 LAKAGEK-------------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVA 172 L + EK +LSA+GS+T+D+R N L++ D + A+ VA Sbjct: 400 LQRILEKSREISSDGTKNGILAAQDAVLSARGSVTIDERMNALIVSDIPAKIQAVRDLVA 459 Query: 173 QMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG-----GVGQVTT--------- 218 ++D V QV + A +V + R+LG ++ L+ AG G G +T Sbjct: 460 RLDESVRQVLVDARLVITKDNFARDLGARFGLSFKGTAGSNPIVGSGNLTGTTFYAGMLE 519 Query: 219 ---------LGSDLSVATATT-HVGFNIGRINGRLL-DLELSALEQKQQLDIIASPRLLA 267 LG +L +A+ + I + +L DLEL AL+ + + ++I+SPR++ Sbjct: 520 EKTIPIDNRLGVNLGIASPNVRAPSYGISILGSDVLVDLELQALQNEGRSEVISSPRVVT 579 Query: 268 SHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVP 327 A + G EIPY + G+ ++KEA+L +EVTP V R+ +++ I ++ Sbjct: 580 QDGNQAKVMSGQEIPYSTL-DDKGSVQTDYKEALLSLEVTPRVTPNDRVNMEIEIKKDRV 638 Query: 328 GQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQL 387 Q AIDK + T+VEV +GET+ LGGI+ ++ ++ VPLLGDIP G + Sbjct: 639 NWSEQVLGQ--PAIDKNLLNTKVEVANGETIVLGGIYEQEQSLSENKVPLLGDIPVVGNV 696 Query: 388 FRHDGKEDERRELVVFITPRLVS 410 F++ K+ + EL++FITPR++ Sbjct: 697 FKNTNKKFTKNELLIFITPRVID 719 >UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TDF1_RICCO Length = 536 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 120/427 (28%), Positives = 210/427 (49%), Gaps = 39/427 (9%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L + + V +L+ + + N+VVS + GT++L L DVPW QAL ++K Sbjct: 110 FSGEKLSLDFNGIDVKSLLRIIGDFTGKNVVVSDSIQGTITLRLKDVPWDQALDIIMKQK 169 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-- 136 GL GN L + + ++ + PL +S ++Y A ++ Sbjct: 170 GLGMDNLGNTLVFAPKEEIAARRKQDQEQENQIDETKPLVTQSFQIKYQKAADIKTLISD 229 Query: 137 --EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + LLS +G+ VD TN + ++D T+++ +++ + ++D+P QV + + IV N+ Sbjct: 230 PKQPLLSKRGTAVVDPSTNTMFVKDIDTSMTKIQEILNKIDIPSRQVLIESRIVQANDTF 289 Query: 195 LRELGVKWTLA----------------------DAQHAGGVGQVTTLGSDLSVATATTHV 232 + LG ++ + + +A G + TT DL+V + Sbjct: 290 GKSLGARFGVVKNNALTAKGLNPGNDVLTSGSLSSTYATGQAKQTTTPDDLNVNLPASAT 349 Query: 233 GFNIGRI--------NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ 284 + G LL++ELSA E ++ I+SPR++ ++ Q A+ G+EIPYQ Sbjct: 350 AGTVSSAALTLLRLPAGFLLNMELSAAESDSKIKTISSPRVITANQQTATFDAGTEIPYQ 409 Query: 285 VSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 ++ SGATSV FK+A LG+ VTP + +I L + ++++ GQ+ V +ID Sbjct: 410 QATS-SGATSVSFKKATLGVNVTPQITPDDKINLDIEVTKDDVGQIFNG----VPSIDTN 464 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 +++T+V V +GET LGG VP IP G LF+ ++EL+ FI Sbjct: 465 KVKTKVLVDNGETAVLGGFLIESKNDSNQRVPFFSSIPVVGNLFKSTLNTHSKKELLFFI 524 Query: 405 TPRLVSS 411 TP+++S Sbjct: 525 TPKIMSD 531 >UniRef50_Q6MPI6 Fimbrial assembly protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPI6_BDEBA Length = 726 Score = 340 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 110/410 (26%), Positives = 196/410 (47%), Gaps = 11/410 (2%) Query: 12 LIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQAL 71 + G +K+++ ++ + L + E+ +N+V+S DV G VSL L VPW QAL Sbjct: 303 FLAGNTKFYGKKISIETSNMDIRDALNFITEESGVNMVISEDVKGAVSLKLRQVPWDQAL 362 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 ++K+ L ++GN+L + + + PL+ R + YA E Sbjct: 363 VVIMKAKKLGYTRQGNVLRIAPLQDLKAEEDDATKLAQARKNLEPLKVRMFPVSYAKVDE 422 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 L K + L +G + D RTN L++ D + L + +A +D QV + IV Sbjct: 423 LEKKIKDFLGDRGRVVGDVRTNALVVTDIEENLERAARLIASLDTQPAQVSIEGKIVEAK 482 Query: 192 EKSLRELGVKWTLADA------QHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLD 245 E R +GV W+ A G V + + S A ++ + FN+ + Sbjct: 483 ESFTRNIGVNWSATGAPIKLGSTARGPVNMNPSFNVNQSAAGSSGALNFNLNVGTLDIFG 542 Query: 246 LELSAL---EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ--VSSGESGATSVEFKEA 300 +AL E ++Q+ II++PR++ + A I Q +E+P + +G + + +FK Sbjct: 543 TLSAALALNESEEQVKIISAPRIMTLSNEKADINQTTEVPVRQVTQNGTATQETFQFKPL 602 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 L +EVTP V G + +K+ +++ G + A A++ +E T+V VK+G+T + Sbjct: 603 TLKLEVTPQVTADGSVIMKVLVNRQFRGADVSSAGQGAFAVNSREANTRVLVKNGQTAVI 662 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 GGI+ G+ VP ++P+ LF+ E+ EL++F+TPR++ Sbjct: 663 GGIYQSDATDGEVGVPWFRELPFVSYLFKTKNISKEKSELLIFLTPRIMG 712 >UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Tax=Idiomarina RepID=Q5QV49_IDILO Length = 427 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 143/396 (36%), Positives = 231/396 (58%), Gaps = 22/396 (5%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 Q V+L +P+ ++Q LA+Q +LN++++ +V G SL L V W+ A T++ S L Sbjct: 43 QPVSLNTRKMPLRDLIQLLADQHQLNILMTDNVKGESSLKLNGVAWQDAFATLIASHDLA 102 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG----E 137 R +G++L + ++A + + ++ L ++ +A A +LAK + Sbjct: 103 IRLQGSMLRI--------DVAGEHTTDSNEYHSILL-----SVNFAKASDLAKLLKNEQQ 149 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 LS G+++VD RTN L+LRD L+ + Q V +D+PV QV + A +VT+ +E Sbjct: 150 SFLSPNGAVSVDARTNTLILRDTPEQLATIRQLVNDLDVPVKQVLIEARMVTVKANVSKE 209 Query: 198 LGVKWTLADAQHA---GGVGQVTTLGSDLSVATATTHVGFNIGRINGR-LLDLELSALEQ 253 LG++W +++ A V + DL A N+ R++ LLDLEL+ALEQ Sbjct: 210 LGIRWGVSEYGLAIPEDAGSFVKGMQVDLPTAAPAGTFSANLARLSDDILLDLELTALEQ 269 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQK 313 + + +II SP++ S+ QPA I+QG+EIPY V + GAT+V+FK+AV+G+ VTP + Sbjct: 270 ENKAEIITSPKIFTSNQQPAYIEQGTEIPY-VETAAHGATAVQFKKAVMGLSVTPQITPN 328 Query: 314 GRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 + ++L I+QN G + G +AID QE+ T+V K+GET+ LGGIF N + Sbjct: 329 NHVLMELTITQNTRGDTVATPTGPAVAIDTQEMSTRVLAKNGETIVLGGIFQEHNLNDDS 388 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VP+LG +P G+LF H + DE+REL++F+TP ++ Sbjct: 389 RVPILGSLPLIGKLFSHQQQRDEKRELMIFVTPTIL 424 >UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMQ3_PELPD Length = 864 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 121/415 (29%), Positives = 199/415 (47%), Gaps = 33/415 (7%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + +KVTL D V ++ Q L+E N V+ DV+GT+S+ L +VPW QAL + Sbjct: 463 SAKEYWGRKVTLEFADAEVRKIFQLLSEVSNKNFVLGDDVTGTISIKLVNVPWDQALDII 522 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 + + L TR+ GN+L++ + +Q ++ Y+DA + Sbjct: 523 LDAKDLETREIGNVLTIKKRGAFKEQLVKQTTY-----------TEYFSVNYSDAKSIKP 571 Query: 135 AGEKLLSAK------GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 E LL ++T D RTN +++ ++ + + + +MD+P QV + A IV Sbjct: 572 QLEALLDPVLLKEKLATITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQVMIEARIV 631 Query: 189 TINEKSLRELGVKWTLADAQHAG----------GVGQVTTLGSDLSVA-TATTHVGFNIG 237 R LGV W + +G G G +TT +A ++G + G Sbjct: 632 EATSTFTRSLGVNWGVHYTDASGSLLGITQLDTGFGGITTAPPTSGTGDSAGGNMGISFG 691 Query: 238 RI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 + NG LD+ LSA + II+ P++ + + A I QG +IPY S G++ T + Sbjct: 692 ALGNGVQLDMRLSAAATAGLIKIISCPKVATLNNKKAKIAQGQQIPYTASDGDNVET--K 749 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 F EA L +EVTP + G I + + + G + AI+ +E T++ ++ GE Sbjct: 750 FVEAALSLEVTPHINANGTISMNIVAKNDSMGDAV--GSSTAPAINTKEATTEMLLRDGE 807 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 T +GGIF + VP L DIP G+ F+ + K + EL+VFITPR++++ Sbjct: 808 TTVIGGIFVDTDNDSDAGVPFLMDIPAIGKFFKTNSKTKTKTELLVFITPRIMAT 862 >UniRef50_A8ZSX5 Type IV pilus secretin PilQ n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSX5_DESOH Length = 987 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 111/426 (26%), Positives = 204/426 (47%), Gaps = 31/426 (7%) Query: 12 LIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQA 70 L + + + L + V++ L + N + DVSG+V+L + VPW Q Sbjct: 568 LFGKKKNFTGEPIALDFYKTDIRNVIRILKDVSGKNFAIDDDVSGSVTLSFVNPVPWDQV 627 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNN-------IARQEAEQARAQANLPLENRSIT 123 L +++ L + I+ + + A + Q+ + + L + Sbjct: 628 LDLILEMNNLGMVEADGIIRIATQATLVQQKESEKAALTAQQDMKKAEETLASLVTEYFS 687 Query: 124 LQYADAGE-LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE 182 + YA+AGE + E LLS +G VD RTN++++ D + + + +A++D QV Sbjct: 688 ISYANAGEDILPHIEGLLSDRGHAKVDNRTNQVIMTDVEEKVEKAREIIAKIDKVTPQVM 747 Query: 183 LSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVT----------TLGSDLSVATATTH- 231 + A IV + RE G +W + + ++ + T T D+++ + ++ Sbjct: 748 IKARIVETSSSFSREFGTEWGIDNRYNSPNINIGTDGAYRDEMGGTYTYDVALNSLSSPV 807 Query: 232 ---VGFNIGRINGR--LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 +G N RI G LD +LS +E + II++P+++ + A+I QG + PY V Sbjct: 808 QNLIGINFARIIGTPFSLDAKLSLMESTGDVKIISTPKVVTLDNKTATISQGIDYPYTVV 867 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 E G V++K L ++VTP V RI +KL+I +N G+++ + + + Sbjct: 868 --EDGEADVKWKTIDLNLDVTPHVTPDDRISMKLNIQKNDVGEIINGEQ----SFNTKRA 921 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 T++ V G+T+ +GGI + +G+ VP + IP G LF++ + DE+ EL++FITP Sbjct: 922 STELLVNDGDTVVIGGIIKEREGAGERGVPWISKIPVLGNLFKYKTRSDEKSELLIFITP 981 Query: 407 RLVSSE 412 +V + Sbjct: 982 NVVRLD 987 >UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SM90_THIDA Length = 745 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 121/457 (26%), Positives = 205/457 (44%), Gaps = 65/457 (14%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L +V V VLQ +A+ LN+V S V+G ++L L DVPW QAL ++++ Sbjct: 283 YSGEKLSLNFQNVEVRSVLQVIADFTGLNIVASDTVTGNLTLRLKDVPWDQALDLIMQTK 342 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-- 136 GL RQ GN++ + + + + PL I L Y A E Sbjct: 343 GLDKRQNGNVIWIAPRDELLAKEKLEFEAKKQVADLEPLVTDYIQLNYLRADEAQTMLYG 402 Query: 137 -----------------------------------------EKLLSAKGSMTVDKRTNRL 155 +K+L+ +G T + +TN L Sbjct: 403 FASGAFLNSAGNNAVNCSTQAQGLGGAAVAQAMQKGEGDTDQKVLTKRGRATYELKTNTL 462 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT--LADAQHAGGV 213 ++ D + ++ + +A++D+P QV + A +V + RELGV+ L A + Sbjct: 463 IITDTASKIAEVRGLLARLDVPARQVMIEARVVIADSLWSRELGVRLGTRLFKATGRDNI 522 Query: 214 GQVTTLGSDLSVATATTHVGF------NIGRINGRLLDLELSALEQK------------Q 255 G TL S+A T +G G++ L+A Sbjct: 523 GVGGTLNESASIAAGGTPTVTPQVELGTVGAAAGQIAMSLLNASNGNLLSLELSALEADN 582 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGR 315 + I+++PR++ S+ +PA I G++IP+ + +V FK+A L + V P +L Sbjct: 583 RGKILSNPRVMTSNQKPAVILNGTQIPFITPGTANSPATVTFKDAFLCLLVDPQILNNDA 642 Query: 316 IRLKLHISQNVPGQVLQQADGEV--LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 + + + + ++ ++ AI + I+TQV V +GETL LGGIF + + D Sbjct: 643 LIMTIEVQKDAIDTANAAVGADIIAPAIATRRIKTQVRVNNGETLVLGGIFDQTEFNNVD 702 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 VP LGD+P G LF+ K+D++ E++VFITPR++ Sbjct: 703 KVPFLGDVPGLGNLFKRTNKQDQKTEMIVFITPRILD 739 >UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVZ8_9DELT Length = 504 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 113/406 (27%), Positives = 203/406 (50%), Gaps = 17/406 (4%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 +VTL + PVA +L+AL+ N++VS V GT +L++ DVPW QA ++++ S GL Sbjct: 100 RDRVTLNMQQAPVATILRALSRIADQNIIVSETVEGTANLNIRDVPWDQAFKSIIASQGL 159 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQ------ARAQANLPLENRSITLQYADAGELAK 134 EG IL + S+ + + R ++ A+ PL +R + L YAD +L Sbjct: 160 SYVWEGEILRIKSMQDLQHELDRAGLKEDIGRRKLAAELTAPLMHRIVKLNYADPEKLQD 219 Query: 135 AGEKLLS------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 + LS GS+ VD+ TN L+++ + + + + + +D P Q+ + A+IV Sbjct: 220 NLIRFLSRDGDGEPHGSIVVDEETNSLMIQATRNDMERVHKAINHLDRPRPQILMEANIV 279 Query: 189 TINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI--GRINGRLLDL 246 +++ RELGV+W+ +V A T + ++ R+ G +L Sbjct: 280 EATQRTARELGVRWSGRYVTPLSFEDEVGFGDLLRDEAGYTGDMDLSVISARLPGSVLYA 339 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEV 306 L ALE+ +++I+ SP + Q A + G +PY+ E G+ +VEF++AVL +EV Sbjct: 340 HLQALERDGEVNILTSPSITTMDNQMAFTEHGQRVPYETV-DEDGSRTVEFEDAVLRLEV 398 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 P+V++ +++ + ++++ I + ET + V+ GET+ + G+ Sbjct: 399 VPSVMEGNHLKMDIRVNKDEVDFTRDVRGQ--PVIRTKHTETNLVVRDGETIVISGLSKE 456 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + V L D+P G LF+ +E E E ++FITP ++ + Sbjct: 457 TLSDTERGVMGLRDLPGLGWLFKSREQEQEMEEFLIFITPTILEPQ 502 >UniRef50_A5WCG3 Type IV pilus secretin PilQ n=2 Tax=Bacteria RepID=A5WCG3_PSYWF Length = 642 Score = 336 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 127/469 (27%), Positives = 231/469 (49%), Gaps = 83/469 (17%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 + +++ V V VL L++ N+V + V+G++ L+L +VPW QAL ++ S Sbjct: 176 YSGKPISVDFQQVEVRSVLHLLSQFTDTNIVATDQVTGSLMLNLVNVPWDQALDIILTSQ 235 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA----- 133 L + +GN++ V +A A+Q A + ++QA +PL + I L YA A +L Sbjct: 236 QLGKQTQGNVILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKAEDLQALIIK 295 Query: 134 -------------------------------------KAGEKLLSAKGSMTVDKRTNRLL 156 +LLS++G + VD RTN L+ Sbjct: 296 ASGSPTPTPVAMQHLPASTAVANAPSALPAVVTRLNLPVSSRLLSSRGVIAVDARTNTLI 355 Query: 157 LRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLAD---------- 206 ++D +LS + + Q+D+PV QV + +V+ + +E+GVKW L Sbjct: 356 IKDTADSLSNIHALIKQIDIPVRQVMIEVRMVSATDNFSKEMGVKWGLLSKGVAHNDDLL 415 Query: 207 --------------------------AQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 ++ + + L DL ++ + F + ++ Sbjct: 416 VGASDQTLADLKSFSAPNTAYKGRNKSRAGYAITRPDNLNVDLGISNPAGRIAFGLLSMS 475 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 ++DLELSA++ + + ++I++P++L Q A++ G++IPYQ S E G T+ +F+EA Sbjct: 476 DLMIDLELSAMQAEGRGEVISTPKILTLDKQTATVSSGTKIPYQSES-EGGGTTTQFEEA 534 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 +L ++VTP++ + +I L+L+I P V V+ ID + T+V V G+TL L Sbjct: 535 LLSLQVTPSITPEDKISLQLNIENGRPNPV----GNGVILIDTDRLITRVTVGDGQTLVL 590 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 GGI+ + + VP GD+P+ G+LF+ D + ++++EL++F+TP+L+ Sbjct: 591 GGIYRNQIFNNTQKVPFFGDLPYIGRLFKQDLRRNDQQELLIFVTPKLM 639 >UniRef50_C8X4Y6 Type IV pilus secretin PilQ n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4Y6_DESRD Length = 719 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 122/416 (29%), Positives = 201/416 (48%), Gaps = 24/416 (5%) Query: 11 MLIPGV-QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ 69 L PG+ + + +++ + D V VL+ LA NL++ V G++SL L +VPW Q Sbjct: 312 PLFPGMDRNYSGETISIDLQDADVEHVLRLLASMADKNLIIDEGVQGSISLKLEEVPWDQ 371 Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNN-----IARQEAEQARA--QANLPLENRSI 122 AL V+ + L + GNI+ + ARQ+A +A+ Q PL+ I Sbjct: 372 ALDLVLLQSDLGMVERGNIIRIAPANTLAEERERIRQARQKALEAQQKIQELEPLQTEFI 431 Query: 123 TLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE 182 + Y A L ++ LS +G + D RTN L++ D + + + + ++D P QV Sbjct: 432 QINYTTASALRPQLQEFLSERGRIGQDARTNTLIVSDTRDNIRKVRSVIDRLDRPEPQVL 491 Query: 183 LSAHIVTINEKSLRELGVKWTLADAQHAGGVGQV-----TTLGSDLSVATATTHVGFNIG 237 + A IV + R LGV G VGQ + + +T ++ + Sbjct: 492 IEARIVYAKDAFKRSLGVSLAGEYYDDVGAVGQYEKSLSAGVLQGFTPEVSTVNMQGALD 551 Query: 238 RINGRL---LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 +I+G LD +L E K I+SPRL+ + Q A I QG +I S ESG T Sbjct: 552 KISGIDLFELDAQLKLGELKGVTKTISSPRLVTLNNQQAEISQGIKIA-NESESESGGTD 610 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 +E+ EA L + V P + ++ L L I+ + P + + I+ + T++ V++ Sbjct: 611 IEYTEATLKLAVQPQITPDDKVILDLDIADDSPTENGED-------IETRTARTKLLVEN 663 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 ET+ LGG++ + ++ VP LGD+P G LF+ D +E REL++FI P ++ Sbjct: 664 QETVVLGGVYQVIENNEKNQVPGLGDVPLLGWLFKTDNVNNENRELLIFIRPTILE 719 >UniRef50_C7LN99 Type IV pilus secretin PilQ n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LN99_DESBD Length = 693 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 119/416 (28%), Positives = 207/416 (49%), Gaps = 26/416 (6%) Query: 12 LIPGVQAAK-PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 L PG++ +++++ + D V VL+ ++E NL++ D+SG +SL L D+PW QA Sbjct: 286 LFPGMKERYTGERISIDLQDADVEHVLRLISEISGYNLILDDDISGKISLKLVDIPWDQA 345 Query: 71 LQTVVKSAGLITRQEGNILSVH-SIAWQNNNIARQEAEQARAQANL------PLENRSIT 123 L V+ GL +GNI+ + + + + Q+A +A QA + PL+ + Sbjct: 346 LDLVLLQRGLGMVIKGNIMRIASTTKLEAERVQLQKAREAAIQAQVSMQNLAPLKTEYMQ 405 Query: 124 LQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 + Y A E + +L+ +GS++ D RTN L++ D + L ++ ++ ++D QV + Sbjct: 406 INYNTAAEFEGKVKTMLTGRGSVSSDPRTNILIVTDTEDTLKRVDSFIKKLDRAERQVMI 465 Query: 184 SAHIVTINEKSLRELGVKWTLADAQHAGGV-------GQVTTLGSDLSVATATTHVGFNI 236 A +V ++ R LGVKW + A G + G + +G I Sbjct: 466 EARLVYATDEFQRSLGVKWGTSYATETAANLPSEQWRGTFASTGLNAINTVNGITLGGTI 525 Query: 237 GRINGR---LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 G+ G LD L E + I+SPR+L + A I+QG+++ S ESG T Sbjct: 526 GKFLGEDLFALDAALQLGEANNLVKTISSPRILTLNNNRAEIQQGTKLATATES-ESGGT 584 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 + E++EAVL + V P + ++ L L IS + P + ID ++ +T++ V Sbjct: 585 TTEYEEAVLKISVLPQITPDNKLILDLEISDDSPKSDGRD-------IDTKQTKTKMMVS 637 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ET+ +GG+ S + +P LGD+P G LF++ + EL++FI PR++ Sbjct: 638 DRETIVIGGVQKTTETSNTNQIPGLGDVPGLGWLFKNTYDAKSKAELLIFIQPRIM 693 >UniRef50_C0QLC9 PilQ n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLC9_DESAH Length = 727 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 119/408 (29%), Positives = 203/408 (49%), Gaps = 22/408 (5%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQTVV 75 + +K+ L + + V + L N V DV+G+V++ L VPW Q V+ Sbjct: 326 KVYTGEKIRLDFYETDIKNVFRILQSVSGKNFAVDKDVTGSVTISLDKPVPWDQVFDLVL 385 Query: 76 KSAGLITRQEGNILSVHSIA-------WQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 K L QEG+I+ + +++ + + I +A + ++ PL I + Y+ Sbjct: 386 KMNRLGQIQEGSIVRIATLSTLAQEQKQKQDAITAHKATLEQRKSLEPLVTEYIPINYSS 445 Query: 129 AG-ELAKAGEKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 A ++ EK+L+ +G ++VD RTN ++L D + + ++ + ++D Q+ +SA Sbjct: 446 AETDVKPHLEKILTPDRGVLSVDSRTNMIILTDVREKIDQAKELIHRLDKVTPQIMISAR 505 Query: 187 IVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGR--LL 244 +V +N+ + LG+ W+++ G + + +GF+ RI G L Sbjct: 506 VVEVNKNFSKSLGIDWSVSKNNANSGFDVIMNYPV-----ASDGSLGFDFSRIFGTELAL 560 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGM 304 D LSA E K + II+SP++L + A IKQG E Y + +SG +SV FK L + Sbjct: 561 DATLSASEIKGDVKIISSPKILTLDNKKAKIKQGLEYAY-LERDDSGGSSVLFKNIDLLL 619 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 EVTP V RI + + I++N V+ V ++ E ET++ V G T+ +GGI Sbjct: 620 EVTPHVTPDNRIGMSVLITKNDLASVVDG----VPSLSTNEAETELLVNDGNTIVIGGIV 675 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + + + P L +IP G+LF D ED + EL++FITP +V E Sbjct: 676 KNTSSTSETGFPGLSNIPLLGKLFGSDSTEDTKNELLIFITPTIVQLE 723 >UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein n=19 Tax=Francisella RepID=Q14H71_FRAT1 Length = 594 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 126/414 (30%), Positives = 204/414 (49%), Gaps = 24/414 (5%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 + +++ D PV VLQ L+E LNLVVS V G +S+ L +VPW + + V+ S GL Sbjct: 178 NEPISISFKDAPVQTVLQVLSEFAGLNLVVSSSVHGNISIDLKNVPWNEVMNIVLVSKGL 237 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA-------GELA 133 T++ +IL V + A + + + N L I L Y A +A Sbjct: 238 ATKKMSSILYVATAAEIAAQEQLELQTKRSLENNATLVTEFIPLNYTTAQAAQTVITSMA 297 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 K ++S +GS+T D RTN L++ D + L +++ V ++D+P QV + A IV + Sbjct: 298 KQNGGIMSPRGSITADARTNTLIVTDTEEKLPRIKEVVNEIDIPNDQVLIEARIVEVLRT 357 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT-------------ATTHVGFNIGRIN 240 S ELG + + D +G T + T Sbjct: 358 SALELGFNYGVVDPSGRVNIGLDTFNSNPNPAPGPTPGPTPTPVDTFVGTTAKLAYTIAG 417 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 G L++E+ ALE + + +ASP L+ ++ Q A IK G ++PY ++ A F+EA Sbjct: 418 GVRLEMEVRALESESLAEEVASPHLVVANNQVAFIKDGEDVPYNQATASGAAAV-AFQEA 476 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQV---LQQADGEVLAIDKQEIETQVEVKSGET 357 VL ++VTP + G I + + +++N G Q I K+EI T+V K G+T Sbjct: 477 VLELQVTPQIAPDGNIIMDILVTKNSVGASPGKTPQGGDLPPIIKKREITTKVMTKDGDT 536 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + +GGI+ + K ++ +P LGDIP+ G LF + D+ EL++FITP+++ S Sbjct: 537 VVIGGIYQKTQKEERNKIPFLGDIPYLGYLFSYTKITDQDSELLIFITPKIIES 590 >UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Reinekea blandensis MED297 RepID=A4BAN5_9GAMM Length = 709 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 130/444 (29%), Positives = 207/444 (46%), Gaps = 62/444 (13%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 +K++L D+ V VLQ +A NLV S +SGT++L L +VPW QAL+ V+K+ Sbjct: 273 PYTGEKLSLNFQDIEVRDVLQIIANYIGFNLVASDSISGTITLRLNNVPWDQALELVLKT 332 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL RQ GN+L V A + + +A+ PL + + YA A ++A Sbjct: 333 NGLDKRQTGNVLLVAPAAELAEQERLELEAREQAEKLAPLRTEYVQVNYARAADIASILR 392 Query: 138 --------------------------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 LS++GS++VD+RTN L++ D L + + Sbjct: 393 SSSSAAAAAANVGDESGGVNSLPSSGGFLSSRGSVSVDERTNTLIITDTSVNLDGIRSAI 452 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKWT--LADAQHAGGVGQVTT----------- 218 + D+PV QV + A IV+ +LGV+W + +Q+ G V + Sbjct: 453 SFFDVPVEQVLIEARIVSARTSVGDQLGVRWGGAIFPSQNVFATGTVESSASIESDIYGG 512 Query: 219 -----------LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLA 267 +L + + N LDLE+SALE + ++++ P+++ Sbjct: 513 SPNPDLTFPDAFAVNLPATGNASSFAVGLIADNLLDLDLEISALESLGEAEVVSQPKIVT 572 Query: 268 SHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVP 327 S Q ASI G + + G + +F EA L + VTP V ++ L L ++Q+ Sbjct: 573 SDGQAASIFSGQNVAFPAEDGGT-----QFIEAGLNLNVTPQVTPDDKVILTLTVNQDS- 626 Query: 328 GQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQL 387 L G AID + TQV V++G TL LGG++ + + P+LGD+P G L Sbjct: 627 ---LAAGGG---AIDTNTVSTQVLVENGVTLVLGGVYRTEKTQLVEKAPILGDLPVVGNL 680 Query: 388 FRHDGKEDERRELVVFITPRLVSS 411 F+ DER EL++FITP+L+ + Sbjct: 681 FKRTTTSDERSELLIFITPKLIQN 704 >UniRef50_C0GNC2 Type IV pilus secretin PilQ n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNC2_9DELT Length = 569 Score = 330 bits (846), Expect = 7e-89, Method: Composition-based stats. Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 19/407 (4%) Query: 12 LIPGVQAAK-PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 L PG++ + V++ + + V VL+ + + NL++ +V G +SL L +VPW QA Sbjct: 171 LFPGMREEYTGEPVSIDLQNAEVEHVLRLITHHTEYNLILDEEVQGKISLRLREVPWDQA 230 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEA-------EQARAQANLPLENRSIT 123 L V+ L ++GNI+ V + R+ +Q + PL+ R I Sbjct: 231 LDLVLAQKDLGMVRKGNIIRVTTADRLEAEEERRRRSRQAELEDQESLRKLEPLQQRFIQ 290 Query: 124 LQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 + YA A EL E LS +G +T D RTN L++RD + L + Q + +D P QV + Sbjct: 291 INYARADELQPRIEDFLSERGRVTQDARTNTLIVRDTPSQLEEITQLIDNLDRPERQVLI 350 Query: 184 SAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRL 243 A +V E RELGV W A ++ + +G Sbjct: 351 EARVVYATESFRRELGVDWGFAYQSPGLDSNIISPDTFNFPSDLEGLLGVGYMGHEGQSF 410 Query: 244 --LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAV 301 L+ L E + + + I++P+++ + Q A I+QG+++ V + T E+ A Sbjct: 411 SVLEARLRLGESQGKSNTISAPQIMTLNNQEAKIEQGTDVAVDVIDADL-RTRREYVPAT 469 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 L + VTP + + L L +S N PG+ I+ ++ ET + + GET+ +G Sbjct: 470 LELIVTPQITPDNNLILNLEVSDNAPGEGGN--------IEVKKAETTLFAEDGETIVIG 521 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 GI + +P L +P G LF+H+ E+ EL++FI P++ Sbjct: 522 GIKKLSESQRETGIPPLSRLPILGWLFKHELVEENMDELLIFIRPKI 568 >UniRef50_B5YJ50 PilQ n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJ50_THEYD Length = 663 Score = 330 bits (846), Expect = 8e-89, Method: Composition-based stats. Identities = 113/419 (26%), Positives = 206/419 (49%), Gaps = 26/419 (6%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + + ++L + D + V + L + N+V+ PDV G V+L L +VPW+QA+ + K+ Sbjct: 245 EEKTISLDLQDADIVGVFRLLGDIGGYNIVIHPDVKGKVTLKLINVPWQQAVDVICKTFQ 304 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE-- 137 L EGNI+ + + + + + + R L+YA ++ E Sbjct: 305 LEKTFEGNIIRIAPVKIFQEEKKLEAETKDLFKKAEDEQIRIFVLKYASVDKVKGTIEAA 364 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 K+LS KG+++ D+RT +++RD + L + + VA +D P Q+ L A I+ ++ + Sbjct: 365 KILSPKGTISTDERTRTVIIRDIPSVLGHIARLVADLDKPTRQILLEARIIEMSSSFSKS 424 Query: 198 LGVKWTLA------------------DAQHAGGVGQVTTLGSDLSVATA---TTHVGFNI 236 LG +W + + + G L +L +T + F I Sbjct: 425 LGFEWGIQWYPPGTRTTIVGSVGAAAGSSASSVPGGTAPLAINLPASTGNVTSPTTAFTI 484 Query: 237 GRINGR---LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 G +N LDL +SAL+Q + +I++P+++ Q A I QG+ IPY +SG Sbjct: 485 GYLNPSQTIALDLRISALQQSGKGKVISNPKVITLDNQKAKIVQGASIPYGEKDVQSGQI 544 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 S +FK+ + +E TP ++ + L + + + + + K E T+V +K Sbjct: 545 STKFKDVAITVEATPHLIDDKSMLLDVSVIKEDLVEFVNIGGVYAPRTTKIEGNTKVSLK 604 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 GETL +GGI+ + + + VP LGD+P G+LF+ G+++ E+++F+TPR++ E Sbjct: 605 DGETLVIGGIYKKTDSLTESKVPGLGDVPLLGELFKSRGRDETLYEVMIFVTPRILKYE 663 >UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2F0_9DELT Length = 514 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 119/404 (29%), Positives = 217/404 (53%), Gaps = 19/404 (4%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 ++ + DVP+ +++LA + N++++P V+G V++H+ VPW ++++S GL+ Sbjct: 99 PTSINLVDVPIGTAMRSLARVAQQNIIINPSVTGNVNIHVEQVPWNDVFMSIIESYGLVA 158 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS- 141 EG ++ V S+ + RQ + PL+ R + +++++ LA++ +LS Sbjct: 159 VVEGGVIRVMSVEDLRRQVERQGLY-LEEEHVSPLQTRVVPVRFSEPASLAESLTPMLSR 217 Query: 142 -----AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 +GS+TVD+ T L++RD L L ++ ++D QV + AHI+ N++ R Sbjct: 218 DKEGNPRGSVTVDRHTRSLVIRDTAENLERLTSFLQEVDQATPQVLIEAHIIETNQEVAR 277 Query: 197 ELGVKWT--------LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL 248 ELGV+W ++DA +G S+ T VGF + G +L+++L Sbjct: 278 ELGVQWGSFWRGQQRVSDAAGGFTYQAGNPIGEQYSLDVLTGEVGFYTASVAGNILEMQL 337 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTP 308 AL+++ +++I++ P + A ++ G+E+PYQ S E G TSV++K+AVL + VTP Sbjct: 338 QALQREGKVNILSRPSVATLDNHEAVLESGTEVPYQ--SIEDGTTSVQYKDAVLRLLVTP 395 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 V+ + I+LK+ ++ I K+ +T + V+ G T+ + G+ + Sbjct: 396 QVISRENIKLKIEAQKDEVDLTRTVMGN--PFIIKKLAQTNLIVEDGSTVVIAGLAKERQ 453 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 S VPLL +IP G FR D + E EL++FITPR++S++ Sbjct: 454 ASSSTGVPLLKNIPGLGVFFRSDARAGEFEELLIFITPRILSAD 497 >UniRef50_Q0EXA5 Probable pilQ; fimbrial type-4 assembly signal peptide protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXA5_9PROT Length = 793 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 122/442 (27%), Positives = 209/442 (47%), Gaps = 50/442 (11%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + QKVT D+ + L+ +AE N+++S DV G +++ L DVPW QAL ++ Sbjct: 352 KVYTGQKVTFNYKDIDIRNALKLIAEMSDFNIIMSDDVKGVLTMRLIDVPWDQALDLILS 411 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + GL Q GN++ + +A + ++ + + PLE ITL YA ++ Sbjct: 412 ARGLGKEQNGNVVRIAPLAVLKADANARKEAKQSVEDVAPLETEFITLGYASVNDVKTIL 471 Query: 137 EK----------------------------------LLSAKGSMTVDKRTNRLLLRDNKT 162 E LLS +G + +D+R+N +++ D + Sbjct: 472 EGGSVKTEVTSAGGAAGGTTGANGTGQTVSSSSELKLLSERGVIMLDERSNTMIITDTRE 531 Query: 163 ALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD 222 L+ +++ +A +D P+ QV + A IV + R+LGVKW + GG T + Sbjct: 532 RLNNIKRLIAVIDKPMQQVMVEARIVEATDTFSRDLGVKWGGTLNSNGGGYTHTVTGAAS 591 Query: 223 LSVATATTHVGFNIGRINGRLLDLEL-----------SALEQKQQLDIIASPRLLASHLQ 271 G L SA E + Q+ +++SPR+ S+LQ Sbjct: 592 APQNVVDLGAAVKAGAGGAIGYTLGTLNNALNLNLELSAAEAEGQIKVVSSPRVFTSNLQ 651 Query: 272 PASIKQGSEIPYQVSSGESG-ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV 330 A I+Q +IP+QV++ + S + K A L ++VTP + RI ++L ++++ P Sbjct: 652 EALIEQDQQIPFQVTTASTPPVVSYQLKSAKLTLKVTPQITADKRIIMQLVVNKDTPVAN 711 Query: 331 LQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRH 390 IDK++I T++ VK+GET+ LGGI+T+ + VP L +IP+ G F+ Sbjct: 712 TVG----PPTIDKKQIMTKLLVKNGETMVLGGIYTQTTSDQVNGVPGLQNIPFIGNFFKR 767 Query: 391 DGKEDERRELVVFITPRLVSSE 412 K R EL++FITP +++ + Sbjct: 768 KQKVRNRNELLIFITPTIIADD 789 >UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae RepID=A7JQ17_PASHA Length = 437 Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 145/425 (34%), Positives = 231/425 (54%), Gaps = 23/425 (5%) Query: 8 LLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPW 67 + + + G A +++++ + P + + LAE+ N+V+ ++ +L L + Sbjct: 4 IFIYFLCGFSLAYANTISIVLKNAPTSLIFTYLAEETGKNMVLDDNIETKSTLRLENKSV 63 Query: 68 KQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQ-ANLPLEN------R 120 + +T+ K L QE +I+ +H + ++ + N PL + Sbjct: 64 DEIFKTLGKVNKLSLTQEDDIVYIHKKEEKAADLTPLPIMNLQNNGQNTPLVTAPKLITK 123 Query: 121 SITLQYADAGELAKAGEK----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 ++ L YA A E+ ++ K LS G + D+R+N L+++D+ +L +E V Q+D Sbjct: 124 TLKLHYAKASEVIESLTKGSGTFLSENGYIHFDERSNSLIVKDSAKSLKNIENLVKQLDQ 183 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHA----------GGVGQVTTLGSDLSVA 226 P Q+ + A IVTI+ + L+ELGV+W + G+ VT + Sbjct: 184 PTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGHYKFGGRLEGNGLNNVTNNLNVNFPI 243 Query: 227 TATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 T + IN R+LDLELSALEQ+ ++IIASPRLL ++ +PASIKQG+EIPY + Sbjct: 244 TGGASAVLQVSSINSRVLDLELSALEQENSVEIIASPRLLTTNKKPASIKQGTEIPYVMY 303 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 + +S AT VEFKEAVLG+EV P + + +I L L ++QN P Q ++ IDKQE+ Sbjct: 304 NTKSEATDVEFKEAVLGLEVVPHLSTQNQILLDLIVTQNSPNS--QSGSSGLITIDKQEL 361 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 TQV K GET+ LGGIF + G+D VP+LG IP+ +LF + +RELV+F+TP Sbjct: 362 NTQVFAKHGETIVLGGIFQHLTQKGEDKVPILGSIPFIKRLFSQTRDKISKRELVIFVTP 421 Query: 407 RLVSS 411 ++ S Sbjct: 422 YILQS 426 >UniRef50_D0ZFZ5 Type II secretory pathway, component HofQ n=2 Tax=Edwardsiella RepID=D0ZFZ5_EDWTE Length = 409 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 171/404 (42%), Positives = 235/404 (58%), Gaps = 12/404 (2%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 ML+ A + +TL D P+ VLQA+AE LNL++S +V G +LH+ PW + Sbjct: 1 MLLAMSSAGQAMPLTLWFDRAPLPSVLQAVAEFAGLNLILSEEVRGEATLHIAHTPWPRV 60 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 L + + L + IL + S A A + ++ + L++ADA Sbjct: 61 LDALAEIYDLSVVRRDGILLIQSRARAARQAGPAAAPALLKPPQM--RSQRVVLRHADAA 118 Query: 131 ELAKAGEK---LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 + K+ + LL GS D RTN LLLR L+AL W+AQ+D+P+ QV+L+AHI Sbjct: 119 TVEKSLRQRRDLLGEAGSAVADIRTNALLLRAEAARLAALRDWIAQLDVPLSQVQLAAHI 178 Query: 188 VTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE 247 V+I+++ LRELG++W D + G A A GF + RI G+ L + Sbjct: 179 VSISQEGLRELGIRWYSGDERSGGQD-------RLRGAADAYFSAGFQVARIGGQTLAVA 231 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 L+ALE++ ++ IIASP L+A+H Q ASIKQGSE+PY VS GE G +++EFKEAVLGM VT Sbjct: 232 LAALERQDKVAIIASPHLMAAHGQTASIKQGSELPYAVSGGERGVSTMEFKEAVLGMSVT 291 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 P VL I L L ISQN+PG+V++Q D E LAIDKQEI TQV + G+T LGGIF + Sbjct: 292 PRVLADAHIELALQISQNMPGRVVRQGDSEALAIDKQEITTQVTLSDGDTAMLGGIFQYQ 351 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + P L D+P G L R D + RRELV+FITP L+S Sbjct: 352 RQVDSIGFPWLADVPLLGHLLRSDSQRSGRRELVIFITPTLLSP 395 >UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FD61_DESAA Length = 566 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 117/453 (25%), Positives = 213/453 (47%), Gaps = 68/453 (15%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 Q VT+ + D V VL+A+A NL+++ +VSG VS+ + VPW + +++ S GL Sbjct: 94 SQPVTMRMKDSEVGVVLRAIARGVGQNLLINSNVSGRVSVEVKAVPWNEVFLSILNSQGL 153 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQAR------AQANLPLENRSITLQYADAGELAK 134 EG+I+ + + ++A Q+ ++ A++ PL + + + YAD L + Sbjct: 154 RYAWEGDIIRIMTAEDMEKDLAVQQVQERTKRQKLVAKSVEPLLMKVVQIDYADPEGLVE 213 Query: 135 AGEKLLSA-------------------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 +L+ +GS+ VDK N L+L + L + + ++D Sbjct: 214 PLNSILATSAGENAASKSKNDKSGSVVRGSVDVDKHNNSLVLMAVREDLEKMLALINKLD 273 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTL------------------------------- 204 P QV + A+IV + R+LGV+W Sbjct: 274 RPPYQVHIKANIVETTRDTARDLGVQWGWMYGRYDSLGNDTDFWLTPGGNSGSAASRDAP 333 Query: 205 --------ADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQ 256 ++ G G D A T +G G++ +L+++LSAL + Sbjct: 334 LTGGYTAGTGSKGVSGQGNGINFPVDFEDAMGAT-MGLMFGKVGSNILEVQLSALADAGK 392 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRI 316 ++I+++P + Q AS + G+E+PY V+ E G V+FK+A L +E+TP V+ +G++ Sbjct: 393 INILSTPSITTLDNQTASTENGTEVPY-VTINEDGDREVKFKDATLMLEITPHVIDEGQM 451 Query: 317 RLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP 376 ++K+ I ++ L + I K+ ET + V++GET+ + G+ +N G +P Sbjct: 452 KMKVSIKKDEVD--LSRNVDGNPFILKKRTETSLIVRNGETVVISGLSKTRNTEGDTGIP 509 Query: 377 LLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 L DIP G LF+ + K + E+++F+TP ++ Sbjct: 510 WLKDIPGLGYLFKSESKSEAMEEVLIFLTPTVL 542 >UniRef50_B8FHA0 Type IV pilus secretin PilQ n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA0_DESAA Length = 844 Score = 320 bits (821), Expect = 6e-86, Method: Composition-based stats. Identities = 120/436 (27%), Positives = 196/436 (44%), Gaps = 49/436 (11%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQTVVKSAG 79 +K+ L + V + L E LN + DV G V+L L VPW Q L V+K Sbjct: 411 GEKIALDFYKTDIKNVFRILKEVSGLNFAIDRDVEGEVTLTLEKPVPWDQVLHLVLKMNQ 470 Query: 80 LITRQEGNILSVHS---------------------IAWQNNNIARQEAEQARAQANLPLE 118 L ++ +++ + I +Q + + QA P+ Sbjct: 471 LGMQKIKDVIRIAPQSVLDEEAAAERAREQANIDRIKTLTETKNQQMQNELQQQALEPMV 530 Query: 119 NRSITLQYADAGELAKAGEKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 I + Y DA +L K E + S +GS+ VD RTN +++ D K + V+++D Sbjct: 531 TEFIPVNYTDASDLIKHVEAVKSPDRGSVDVDIRTNTIIMIDIKDRIKRARDIVSRLDRV 590 Query: 178 VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGG--VGQVTTLGSDLSVAT-------- 227 QV++ A +V R +G+ W G G G D+ T Sbjct: 591 TAQVQIEARVVEAQTTFSRSIGLAWNGESGIQPGDSREGVGPQRGYDVLGGTYGYNWSVN 650 Query: 228 --------ATTHVGFNIGRINGRL---LDLELSALEQKQQLDIIASPRLLASHLQPASIK 276 GFN R+ G L+ L+A E + ++ I++SP++ +PA+IK Sbjct: 651 YPTETDDYGNNTFGFNFSRLLGLTPLSLNATLNAAESRGEIKIVSSPKIRTLDNKPATIK 710 Query: 277 QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG 336 QG + P + G+ G T + +K L +EVTP V Q R+ +K+ + +N G V+ + Sbjct: 711 QGIDYPIKQFDGD-GNTVIVYKAVDLQLEVTPHVTQDRRVSMKMTVEKNDVGAVISEEQ- 768 Query: 337 EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDE 396 + + +E++T++ V G+T+ +GGI + D P L D+P G LF+ K +E Sbjct: 769 ---SFNTKEVDTELLVNDGDTVVIGGIIKTTFRDDVDGWPGLIDVPVLGWLFKDSTKSEE 825 Query: 397 RRELVVFITPRLVSSE 412 R EL+VFITP +V E Sbjct: 826 REELLVFITPTIVELE 841 >UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYV5_DESOH Length = 538 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 107/432 (24%), Positives = 204/432 (47%), Gaps = 39/432 (9%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 G++ VT+ + D +A +L+AL + N+++ VSG +++ VPWK+A + Sbjct: 90 GLEELPDTPVTIHMTDTDIAVILRALTKAAGKNIIIGAGVSGRANINAEGVPWKEAFAGL 149 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +++ GL + G+ L + ++A + A + A R Q + L+Y++A ++A Sbjct: 150 LRTHGLTYNRIGDTLRIKTLADIQQDFAIENAY--RKQQGERSVTQVFFLKYSEAADVAN 207 Query: 135 AGEKLLS----------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELS 184 + + + A+ S+ VDKR N +++ + + Q+D P QV + Sbjct: 208 LLKPVTARAASAEGVKEAQQSVVVDKRNNAVIVHTPLPGIEQCAALIRQIDRPTRQVLIE 267 Query: 185 AHIVTINEKSLRELGVKWT---------LADAQHAGGVGQVTTLGSDLSVATATT----- 230 AHIV ++ + R+LG++W G GQ + + VA T Sbjct: 268 AHIVETSKDTARQLGIQWGGVAKDKQHSWFTGATEGPAGQTLFDANGVPVAANPTGNWAA 327 Query: 231 -------HVGFNIGRI----NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 + G ++G I L+ +L+ALE+ +L+I++SP + A I+ G Sbjct: 328 NFPASLGNTGLSLGYIYQDLGQSLIAAQLTALEEDGKLNILSSPSITTLDNSAAVIESGR 387 Query: 280 EIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL 339 ++P+Q E ++E+K+AVL + VTP ++ +R+K+ ++ Sbjct: 388 DVPFQTV--EDNEVNIEWKKAVLSLAVTPHIIDASTLRVKIKTHKDELDWSNAVLTDGNP 445 Query: 340 AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRE 399 I + ET++ + G+T +GG+ + + Q VPLLG IP G FR + ++ E Sbjct: 446 TIITKNAETEMILFDGQTTVIGGLNKQSSSQSQFGVPLLGRIPILGFFFRSTSRSNDMEE 505 Query: 400 LVVFITPRLVSS 411 +++FITP ++ Sbjct: 506 VLIFITPHILEP 517 >UniRef50_Q7MH82 Type IV pilus (Tfp) assembly protein PilQ n=9 Tax=Vibrionaceae RepID=Q7MH82_VIBVY Length = 594 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 152/434 (35%), Positives = 245/434 (56%), Gaps = 45/434 (10%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + + +++ D+PV VLQ +A+ NLVVS V+G V+L L VPW+Q L +++ G Sbjct: 160 EGKLISINFQDIPVRNVLQLIADYNGFNLVVSDSVTGNVTLRLDGVPWQQVLDIILQVKG 219 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE-- 137 L R EGN++ + + +Q ++ A+ L++ I + +A A ++A+ Sbjct: 220 LDKRVEGNVVLIAPQDELDLREKQQLEKERLAEELGSLKSEIIKVNFAKASDIAEMINGK 279 Query: 138 ---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +LS +GS+ +D+RTN LLLR+ + + + + +D+PV QV++ A IVT+NE + Sbjct: 280 ESVSMLSERGSVAIDERTNSLLLRELPENIEVIREIINSLDIPVKQVQIEARIVTVNEGN 339 Query: 195 LRELGVKWTLADAQHAGGVGQV-------------------------------------T 217 L ELGV+W + VG Sbjct: 340 LDELGVRWGFTSINGSTTVGGSIENNLATIGLYNAGSGSGSGDSGSGGSGGEGGSASIDD 399 Query: 218 TLGSDLSVATA-TTHVGFNIGR-INGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 L +L+ +A + + F + + + LLDLELSAL+++ + +II+SPRL+ ++ +PA I Sbjct: 400 FLNVNLAATSANASSIAFQVAKLGSDLLLDLELSALQRESKAEIISSPRLITTNKKPAYI 459 Query: 276 KQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 +QG+EIPY SS SGAT+V FK+AVL ++VTP + R+ L L ++Q+ PG++++ Sbjct: 460 EQGTEIPYLESSS-SGATTVSFKKAVLSLKVTPQITPDNRLVLDLSVTQDRPGEIVKTGT 518 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 GE +AID Q I TQV V +GET+ LGGIF + D VPLLGD+P G LFR + Sbjct: 519 GEAVAIDTQRIGTQVLVNNGETVVLGGIFQHSITNTTDKVPLLGDLPLLGALFRRSYENV 578 Query: 396 ERRELVVFITPRLV 409 +REL++F+TP+++ Sbjct: 579 GKRELLIFVTPKVI 592 >UniRef50_B8DPS5 Type II and III secretion system protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPS5_DESVM Length = 552 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 115/435 (26%), Positives = 211/435 (48%), Gaps = 51/435 (11%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 VTL + +V V L++LA N+++SP V G+V++++ VPW + ++ S GL Sbjct: 86 PVTLKLHNVDVGVALRSLAAAAGKNIILSPGVKGSVNVNVNRVPWSDVFKGMLDSNGLDY 145 Query: 83 RQEGNILSVHSIAWQNNNIA------RQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 +G ++ V ++A + + ++ A++ + + P+ + ++YA+A EL K Sbjct: 146 AWQGELIKVITMADKKVELEHATLENQRMAQKLKGRKVGPMVTTVLDVRYAEAAELKKNL 205 Query: 137 EKLLSAK------GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 E LS GS+ VD TN L+++ + L V+ +D P Q++L AHIV Sbjct: 206 EGFLSKDDGGKPVGSVVVDTFTNSLIIQAVEDDQKKLMTLVSNLDKPRAQIQLKAHIVEA 265 Query: 191 NEKSLRELGVKWT------------------------------------LADAQHAGGVG 214 +++ RELG++W + A G G Sbjct: 266 TKETARELGIQWGGVNRVGNMAGSNDLWVTPGGTGGTAGTSPYNGSYTPIFGAPGISGQG 325 Query: 215 QVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 D + + +G G I G +L+++LSAL++ +++I++SP + Q A Sbjct: 326 NGINFPIDTTGKSGAGSLGLMFGTIGGNMLEMQLSALQESSKINILSSPSISTLDNQMAY 385 Query: 275 IKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 + G ++PY VS+ G V+F++AVL +E+TP V+ ++LK+ + ++ Sbjct: 386 TENGEKVPY-VSTNAQGDREVKFEDAVLRLEITPHVIDDKNLKLKVLVKKDEVDLTRTVE 444 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 I K++ ET + V+ GET+ + G+ + +G+ VP L D+ G LF D K Sbjct: 445 GN--PFIIKKQTETTLIVQDGETIVISGLTKDRKSTGRSGVPGLHDVEGLGWLFGSDSKA 502 Query: 395 DERRELVVFITPRLV 409 + E+++FITP ++ Sbjct: 503 SKLEEVLIFITPAVL 517 >UniRef50_Q1IRM5 Type II and III secretion system protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM5_ACIBL Length = 808 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 113/420 (26%), Positives = 188/420 (44%), Gaps = 31/420 (7%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 + +++ + DV + + + E LN+V+ P V GTV+L L DVPW QAL V+++ GL Sbjct: 391 GEPISVNLKDVDLKDFFRLIHEISGLNVVLDPSVKGTVTLVLDDVPWDQALDIVLRNNGL 450 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 + +GN+L + SI + + + + L YA + +L +K L Sbjct: 451 DRQLDGNVLRIASIETLRTEAVARRQQLEAQALAVDKVTVTRFLSYARSADLVPTLKKFL 510 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 SA+G + D R N L++ D + +L++ ++Q+D +VE+ A +V +RELG+ Sbjct: 511 SARGDIIADGRMNALVISDIPGVIPSLDRLISQLDRKTQEVEIEARVVAATRTFVRELGI 570 Query: 201 KW-----------------TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN--- 240 + GQ T T + N +N Sbjct: 571 QLGGGWGGASTSVSGNPNAGFGSTNFKNPAGQPITGAPFPISTTGAFPLFTNFQVLNPTA 630 Query: 241 ---------GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 LDL LSA EQ+ L I++ PR++ + A ++QG +P S +G Sbjct: 631 GLELINIGHSYGLDLYLSAAEQRGLLKILSRPRVVTQNNVTALVRQGFRLPVVTLSQLNG 690 Query: 292 ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 +V + +A L + VTP + + I L + + P + Q+ TQV Sbjct: 691 PPTVTYVDAFLRLTVTPQITVENTIFLAVDVENTTPDFTRTVLGN--PILLTQQTTTQVL 748 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 V G T+ +GG+ +N VP+LGDIP LF H + +EL+ FITP++V + Sbjct: 749 VTDGGTVTIGGVVQTQNTLTSQEVPILGDIPILKYLFMHKTTNTQTQELIFFITPKIVQT 808 >UniRef50_A0LFN7 Type IV pilus secretin PilQ n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFN7_SYNFM Length = 636 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 111/406 (27%), Positives = 204/406 (50%), Gaps = 16/406 (3%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + + ++L + D + VL+ LA+ N+V+ PDV+G V+L + VPW Q L ++ Sbjct: 227 KQYTGKPISLDLLDADLRNVLRLLADLTGTNIVIEPDVTGKVTLKVEQVPWDQVLDMIIS 286 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR--------SITLQYAD 128 L Q G+++ + + + A Q+AE RA+ L ++ +T+ YA Sbjct: 287 MNDLGQEQVGSVIRIARRSKLKSEWA-QQAEAIRAKQEYLLTSKDLGEINTAYLTVNYAQ 345 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 ++A + S KG ++VD+RT+ ++ D ++ + ++D P QV + A I+ Sbjct: 346 VTDVASKINEAKSDKGKVSVDERTSLIIYSDYPGRINNARMLLNRLDRPTSQVLIEARII 405 Query: 189 TINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLL---D 245 T+ + R LG+ L + N+ ++ G L D Sbjct: 406 TLTSEVKRSLGMNLGFGG--DTPNHSATVPFTDFLINSPPANLFALNLAQMVGTTLLKVD 463 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY-QVSSGESGATSVEFKEAVLGM 304 L +SALE ++ I+A+PR+L + A I QG +IPY +V S T +FK+AVL + Sbjct: 464 LTISALETADEIRIMAAPRVLTMNNVKAVISQGVQIPYLKVGDTASNITGTDFKDAVLEL 523 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 VTP + ++R+ + Q+ P + A G+ ID ++I T++ V G + +GGI Sbjct: 524 AVTPHITPDHKVRMTIEAKQDEPSSTVTGAQGQ-PGIDTRKISTELLVDDGNIIVIGGII 582 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 ++++ + + P L D+P G+LF+ + + +R E+++FI P++V Sbjct: 583 RNRDEAKKTATPGLSDVPILGRLFKSNEVDAQRNEILIFICPKIVD 628 >UniRef50_A1HM79 Type II and III secretion system protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HM79_9FIRM Length = 414 Score = 310 bits (795), Expect = 6e-83, Method: Composition-based stats. Identities = 107/401 (26%), Positives = 185/401 (46%), Gaps = 23/401 (5%) Query: 12 LIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQAL 71 ++P AA P V + V D V VL ALA ++++V V+G +++ L ++P++ AL Sbjct: 33 VMPPALAAGPM-VNMNVTDAEVRDVLTALASVGRVSIVADDSVTGKITIQLRNIPFETAL 91 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 V K+ GL + GN++ V S + + I L+YA A E Sbjct: 92 DLVTKTKGLTYYKTGNVIVVASADKLSKGFG---------------SVQIIKLKYARADE 136 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 + K+ ++ + + VD+ TN L+ + AL Q +A++D+P QV L A +V IN Sbjct: 137 VKKSLALVIPDE-RLKVDEATNSLVFSGSPAESEALRQALAELDVPYEQVSLEAQVVAIN 195 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI-GRINGRLLDLELSA 250 + ++LG W + + G G +LSA Sbjct: 196 RNAAKDLGFDWQWSGLPANTEFDSTSGTTKTTREYPGVIKFGKAYDGTPYEFTFQAKLSA 255 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG--ATSVEFKEAVLGMEVTP 308 L + ++A P++ + + A I G IP V E+G T++E+ +A + + TP Sbjct: 256 LITSGEAKLLAKPKITTINGKEAKILIGDRIPVLVERTENGKTTTTIEYIDAGIKLTYTP 315 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 + G I +H + P V + + + +E T V +K G+T+ +GG+ + + Sbjct: 316 RINADGYITAAVHTEVSTPTLVPEM---KAYRVTTREATTNVRMKDGDTMVIGGLISNEE 372 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G++ VPLL D+P G+LF K E+V+F+T R+V Sbjct: 373 SGGKNRVPLLSDLPVLGKLFESVHKTKNETEVVIFLTARIV 413 >UniRef50_B3TCB2 Putative bacterial type II and III secretion system protein n=2 Tax=environmental samples RepID=B3TCB2_9ARCH Length = 648 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 112/418 (26%), Positives = 200/418 (47%), Gaps = 26/418 (6%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV 75 + + +K++L + V + + AE N+++SP+V G+V++ + DVPW QA++ ++ Sbjct: 234 ILFGEKEKISLDFQNADVRNLFRIFAEISGFNVILSPEVGGSVNIRMIDVPWNQAMEIIL 293 Query: 76 KSAGLITR-QEGNILSVHSIAWQNNNIARQEAEQARAQAN-------LPLENRSITLQYA 127 ++ L GNI+ V + + +E+ RA + L + + +A Sbjct: 294 TNSALGRECFGGNIVRVATKVTLAAEDTARLSEKTRAVSERLNERDSEDLVTEVVRVNHA 353 Query: 128 DAGELAKAGEKLLSAKGS--MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 D EL+ + L SA+ +T+D RTN L+L D + + + + + +D+ QV + A Sbjct: 354 DITELSTSLNALKSARKDALITIDTRTNTLILNDLRHHVDDMLETIKILDISTPQVLIEA 413 Query: 186 HIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGR--- 242 IV I++ +ELG+ W L + + + + V G + G Sbjct: 414 KIVEISKTFSQELGISWGLVNPEPGFPTVTGNSTFDTQFLVDLRPTVDIATGNVAGFDSL 473 Query: 243 ---------LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 L++ L ALE+ + +I+SPR+ + + A + G +IPYQV+S E Sbjct: 474 IQGFLPGNIALNVRLEALEKSGKGRVISSPRVTTADNKEARVLSGRDIPYQVNSVEGN-- 531 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 S++F A L + VTP V I + + ++N A + I ++E+ T+V V Sbjct: 532 SIQFVNAELSLTVTPHVTSDNSIYMTIDATKNAADFAQLAAG--IPTITRKEMHTEVLVG 589 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +GET L GI+ + + +VP +P G LFR +D EL+VFITP +V + Sbjct: 590 NGETTVLAGIYESTSTENKKAVPWFSKLPLVGFLFRAFDDKDTINELLVFITPTIVET 647 >UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIY3_THIDA Length = 656 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 96/411 (23%), Positives = 186/411 (45%), Gaps = 26/411 (6%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQALQT 73 + A + +TL D P+ V +A Q LN V DV +L + P +A+ Sbjct: 175 LGPAFHKPITLEFRDAPLRNVFDMIARQSGLNFVFDKDVRLDTKATLFARNTPIDEAVDM 234 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 ++ + L +++ +++ + +Q+A Q L +S L ADA Sbjct: 235 LLMTGQLSK----KVVNANTLLIYPDQPQKQKAYQE-------LMVKSFYLGNADAKATM 283 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 L+ AK + VD+R N L++RD A+ E+ VA DL +V L ++ + Sbjct: 284 AMLRTLVKAK-DLHVDERLNLLVMRDTPDAIRLAERIVAVQDLAEPEVMLEVEVLEVKRG 342 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGF----NIGRINGRLLDLE-- 247 L +LG+++ + +T+G V T ++ I + + Sbjct: 343 RLLDLGIQYPTNFSLLNLPPATSSTIGPGGVVTNTTPPPSVLTVESLKNITASQIAISPT 402 Query: 248 --LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT---SVEFKEAVL 302 + +Q ++I+A+PR+ + + A I G ++P S+ S SV + + L Sbjct: 403 PGVDLRKQDSDVNILANPRIRVKNREKAKIHIGDKVPVITSNTTSTGVVSESVSYLDVGL 462 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE-VLAIDKQEIETQVEVKSGETLALG 361 ++V P+VL + +++++ + + + ++ +G I + T + +K GET L Sbjct: 463 KLDVEPSVLMREDVQIRVGLEVSNIVREIRSGNGTLTYQIGTRNAGTTLRLKDGETQVLA 522 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G+ + +++S +P LGD+P G+LF E + E+V+ ITPR++ S+ Sbjct: 523 GLISDEDRSTASRIPGLGDLPLIGRLFSSQRDERNKTEIVLLITPRVLRSD 573 >UniRef50_Q1GYK8 Type II and III secretion system protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK8_METFK Length = 657 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 90/404 (22%), Positives = 182/404 (45%), Gaps = 33/404 (8%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQAL 71 P ++ A + V+L + D + V +AL+ +N ++ D+ ++ + P +A+ Sbjct: 173 PKLKPAFNKPVSLELRDANIKMVFEALSRATGINFILDKDIKPETKATVFIKKSPVDEAI 232 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 + V+ + GL + +LS ++ N A+ + Q L R+ L A A + Sbjct: 233 EMVLATNGL----QKKVLSENTALVFPNTAAKLKDYQ-------DLVIRNFYLTNAKAKD 281 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 ++ + +L K + D+R N +++RD + E+ VA DL +V L ++ ++ Sbjct: 282 VSTMIKTMLKTK-DVHTDERLNMIVIRDTPEVVRIAEKLVAANDLADPEVMLEIEVMEVS 340 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 + L+ELG+ + + AG L D + + FN + L+ Sbjct: 341 RERLQELGIDYPTSLTASAG-------LSIDAMRSNNSGTYLFNS--------NPTLNFR 385 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGMEVTP 308 + ++I+A+PR+ + A + G ++P + +G + SV++ + L +E P Sbjct: 386 KTTGDINILANPRIRVRNNDKAQVLVGDKVPVITTVATAGVGSSQSVQYLDVGLKLEAEP 445 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQ-QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 + + +K+ + + G G V I + T + +K GET L G+ + Sbjct: 446 RITLDDFVNIKIALEVSSLGSSTTLNGGGVVYQIGTRNASTLLRLKDGETQILAGLINDE 505 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + +P LGDIP G+LF + ++ E+V+ ITP +V++ Sbjct: 506 ERRNTSRLPGLGDIPLLGRLFSNQTDNRKKTEIVLAITPHVVNN 549 >UniRef50_C9RKD2 Type II and III secretion system protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD2_FIBSS Length = 487 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 100/428 (23%), Positives = 196/428 (45%), Gaps = 23/428 (5%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 M A G A + ++ + ++++ ++++++PDV G +SL Sbjct: 13 MVASFATAWAAPAEGSVAPNKKLYDFNFVNMDYEAIFRSVSVIAGVDILIAPDVKGKISL 72 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 +T W++ L + L + +S+ ++ + E+ +A+ N PL + Sbjct: 73 RVTKKTWQETLDIICNMNDLTWVIQDKYISIQRLSTYQAKQKKLADEENQAEQNAPLVRK 132 Query: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 + + +A A EL K E + S +G ++V +RTN +++ D ++ + + + ++D+ Q Sbjct: 133 NFQVHHAKADELVKVLESMKSNRGKISVVERTNSIIVYDTESKIEQMGNALVELDVETLQ 192 Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGV-----------------GQVTTLGSDL 223 + ++A +V +N + RELGV WT A G + + + Sbjct: 193 IMITAKLVVVNSELARELGVDWTAALGSSTLTPGTAAAATGATAGSSRISGVIQSFPNGT 252 Query: 224 SVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 S A + ++ L + +S L +++ASP++ A + G ++ Sbjct: 253 SPAVGKANTAITASLLDNN-LQIAISNLMGDASTEVLASPQVSTLDNTEAQVFMGDKVSI 311 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 +V +SG +S + E + + VTP V RI L LH N G + + I Sbjct: 312 RV-IDDSGESSTKMVETGIKLTVTPHVSGDNRILLDLHPENNSYGYDEKGE----VVIST 366 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 QE +T+V V GET+ +GG+ +N + +P L DIP G LF++ K +++LV+F Sbjct: 367 QEAKTKVVVADGETVVIGGLTRNENTESESGIPFLKDIPLLGNLFKYSRKSITKKDLVIF 426 Query: 404 ITPRLVSS 411 +TPR++ + Sbjct: 427 VTPRIIRN 434 >UniRef50_D2RIL0 Type II and III secretion system protein n=2 Tax=Acidaminococcus RepID=D2RIL0_ACIFE Length = 405 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 109/411 (26%), Positives = 194/411 (47%), Gaps = 35/411 (8%) Query: 1 MKQWIAA-LLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS 59 MK + + + P + ++L V + PV VLQ++A+ NLV+ + GT+S Sbjct: 1 MKLLLLFCIFCIFTPVRWVLAAEPLSLSVQEAPVRDVLQSMAQMAGRNLVLDSQIPGTLS 60 Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN 119 L + +P+ QAL+ V +S GL R+EGN L V S R +A R + Sbjct: 61 LEIQQLPFPQALEMVTRSQGLCFREEGNTLWVAS-------PERMDALYGRLTVH----- 108 Query: 120 RSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 L+Y A E A+ + L S + + D TN +L + + L++ + +D P Sbjct: 109 ---PLEYISARETAETLKPLFSTPLAWSRD--TNAILFHGSPGEENRLKEALKALDRPTR 163 Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI 239 Q+ L A I+++ E + RELG++W + G+ G ++G Sbjct: 164 QITLEARILSLGESASRELGLQWDWSALPEGRKKGEGGFGGR------------LHLGHS 211 Query: 240 NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS--SGESGATSVEF 297 G LSAL Q+ + ++A+PR++ + ASI G IP + + ++ E+ Sbjct: 212 YGASFQARLSALCQEGKAKVLATPRIITLPGREASIFIGDHIPVVTEKVTNSTTTSTTEY 271 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 +A + + TP + Q G I K+H + P + + + I + +T V ++ ET Sbjct: 272 VDAGIRLSYTPYLSQDGLITAKVHTEVSTPTLIAELKN---YRITSRTADTHVRLREKET 328 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 L +GG+ + + + +++PLL +P G+LF+ + R E+ +F+TP L Sbjct: 329 LVIGGLISEQEQHRMEAIPLLSKLPLLGELFKFRSRSRNRTEVCMFLTPYL 379 >UniRef50_C6XCK3 Type II and III secretion system protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCK3_METSD Length = 675 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 88/412 (21%), Positives = 185/412 (44%), Gaps = 26/412 (6%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQAL 71 P ++ + V+L D + V +AL+ +N ++ D+ ++++ + A+ Sbjct: 176 PRLKPPFQKPVSLEFRDANIKMVFEALSRATGINFILDKDIRADAKATVYIRKASIEDAI 235 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 + V+ + GL + L+ S N + + + L RS L A A + Sbjct: 236 EMVLATNGL----QKKALTETSALIFPNTPQKVKDYKE-------LMIRSFYLTNASAKQ 284 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +A + +L K + VD+R N +++RD + E+ VA DL +V L ++ I+ Sbjct: 285 VASTLKTVLKTK-DVVVDERLNMIVMRDTPEVIHIAEKLVAANDLADPEVMLEIEVLEIS 343 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDL----SVATATTHVGFNIGRINGRLLDL- 246 L+ELG+ + + ++ +T GS + +VAT + + +N D+ Sbjct: 344 RSRLQELGIAYPNQISVNSRIPVTTSTAGSGIAVTSTVATDSPLTLEGLLNLNSSRFDVS 403 Query: 247 ---ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEA 300 ++ + +++I++PR+ + + A I G ++P ++ + + +V + + Sbjct: 404 PNPAVNFRKTTGDVNLISNPRIRVRNNEKAKILVGDKVPIITTTSTANVGISENVTYIDV 463 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG-EVLAIDKQEIETQVEVKSGETLA 359 L ++V P + + +K+ + + G +G V I + T + +K GE Sbjct: 464 GLKLDVEPRITLDDFVNIKIGLEVSSLGDRTTTRNGATVYTIGTRNASTLLRLKDGEMQI 523 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 L G+ + + +P LGDIP G+LF + + E+V+ ITPR++ + Sbjct: 524 LAGLIQDEERKNASKLPALGDIPILGRLFSNQEDRKNKTEIVLAITPRILGN 575 >UniRef50_A3YI86 Type IV pili biogenesis protein PilQ n=1 Tax=Marinomonas sp. MED121 RepID=A3YI86_9GAMM Length = 390 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 121/413 (29%), Positives = 207/413 (50%), Gaps = 34/413 (8%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 K W LI +Q++ + + V D + L LA Q +L+++P ++ +SL Sbjct: 3 FKAWCC-----LILWLQSSYLYAMDVQVKDKDIQDFLPWLAAQTDNSLILNPAINANLSL 57 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 L +V W+ + + L A ++A++ + P++ R Sbjct: 58 SLRNVNWRDLMGFIAAQHELTLTW-------------AEETAVLMPKKAKSLDSKPVKER 104 Query: 121 ----SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 +++A A ++++ K+L K ++ D RTN ++ +D + L + V +D Sbjct: 105 CEAKFWHIEHALAEDVSRHL-KILYPKLVLSYDNRTNSIISQDCHAS-PQLLEMVRWLDS 162 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI 236 P+ Q+E+SA I + ++GV+W Q AG + DL+ ++T+ + F + Sbjct: 163 PLRQIEISARIAQVQNAVESQIGVEWQ---GQLAGDTLSTASGLVDLATTSSTSGLSFAV 219 Query: 237 GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 + + LL L LS LE +I++ P+++ + Q A I+ G+E+PYQ S E T VE Sbjct: 220 AK-SDDLLALNLSFLESNGLANIVSEPKIVTAEGQMAKIESGTEVPYQTSDDE--GTHVE 276 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 FK+A L +EV P V Q +++L L I Q+ G++ V +I+ I TQV V + E Sbjct: 277 FKQAGLTLEVIPFVKQGDKVQLSLKIYQDAVGEMYNG----VPSIETNRINTQVLVGNQE 332 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 TL LGGI+ + VP GD+P+ G LFRH + E+ EL+VFITP+L+ Sbjct: 333 TLVLGGIYRDEVWESTSKVPFFGDLPFVGALFRHQAQRQEKVELLVFITPKLL 385 >UniRef50_C9LRH4 Putative secretin and TonB short domain protein n=2 Tax=Selenomonas RepID=C9LRH4_9FIRM Length = 462 Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 104/426 (24%), Positives = 185/426 (43%), Gaps = 27/426 (6%) Query: 6 AALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDV 65 A L G A +TL V D V +L ++A L+L++ V G +SL L DV Sbjct: 24 AFFLAAWFAGALPAAASPLTLEVVDADVTALLTSIARLSGLDLILDDSVKGRISLSLKDV 83 Query: 66 PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQ 125 ++AL + ++ GL + EG +L V A + R A+L ++ L Sbjct: 84 EPEEALMLISRAKGLAVQHEGKVLLV-RAAKEAAPFYRMHVLPVH-HADLDTAFAAVKLS 141 Query: 126 YADAG-----ELAKAGEKLLSAKG------SMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 +AG E K G++ +S +G + +D+ TN LL + + E + + Sbjct: 142 LGEAGISAIDENKKNGKEDISEQGLYRTGERLLIDRATNALLFYGTEEEKARAEAVLHSL 201 Query: 175 DLPVGQVELSAHIVTINEKSLRELGVKWTLA-------DAQHAGGVGQVTTLGSDLSVAT 227 D+P QV L A +V + + + +ELGV W + +G G + G D V Sbjct: 202 DVPTEQVSLEARVVALEKNAAKELGVDWDWSPLPIDPHGTSKSGAEG--SRRGIDGEVPG 259 Query: 228 ATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ--V 285 G+ +++AL + +++A P + + A I G +P Sbjct: 260 VIRFGRTPEGKPYEFYYRAKIAALITDGKANVLARPNITTLQGREAVINIGGSVPVPETQ 319 Query: 286 SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQE 345 ++ + TS+ +K+A + + TP + + G I ++H + P V + ++ Sbjct: 320 TTNSTVTTSITYKKAGIILRYTPRIHENGEITARVHTEVSSPVYVDAL---KAYKFQERS 376 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 +T V +K GET+ +GG+ + VPLLGDIP G F+ + E+++F+T Sbjct: 377 ADTTVRLKDGETMVIGGLIGSEESRVFAKVPLLGDIPILGTFFKSVRRTKTDSEIMIFLT 436 Query: 406 PRLVSS 411 ++ Sbjct: 437 AHILRD 442 >UniRef50_B9Z6A5 Type II and III secretion system protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6A5_9NEIS Length = 659 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 91/422 (21%), Positives = 182/422 (43%), Gaps = 36/422 (8%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQAL 71 P +++A + +TL D + V + ++ +N V DV ++ + + + A+ Sbjct: 165 PQLKSALSRPITLEFRDAALKAVFEVISRTSGINFVFDKDVRPDLKATIFVRNSTIEDAI 224 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 Q ++ + L R +L+ ++I NN A+Q+ Q L ++ L A+A + Sbjct: 225 QLLLVTNQLDRR----VLNDNTIMVYPNNPAKQKDYQE-------LVIKNFYLANAEAKD 273 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 A LL + + VD + N +++RD A+ E+ +A DL + L +V +N Sbjct: 274 TANLIRALLKTR-DVFVDDKRNLVVMRDTPEAVKVAERLIASQDLAEPEAILDVEVVEVN 332 Query: 192 EKSLRELGVKW-----------------TLADAQHAGGVGQVTTLGSDLSVATATTHVGF 234 L+ LG+ W G V V T G +VA+ ++ Sbjct: 333 RARLQSLGIDWPSQVGYGLLTGGTSTQTGTVTNPTTGAVTPVVTPGVAATVASGVINLRN 392 Query: 235 NIGRINGRLLD--LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS---GE 289 N + + + L L Q +++A+PR+ + + A I G ++P S+ Sbjct: 393 NPLGLTTFIANPALVLHLQAQDTDANVLANPRIRVKNHEKAKIHIGDKVPVFTSTAVVNA 452 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 A SV + + + +EV P++ + + + + + + + I + +T Sbjct: 453 GIAQSVSYLDVGVKLEVKPSIGLDDDVTIDVGLEVSSIVKQVDFGTSTAYQIGSRAADTT 512 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + ++ GET L G+ +++ +P LGD+P G+LF + + E+V+ ITP +V Sbjct: 513 LRLRDGETQVLAGLIQDEDRRSITKIPGLGDLPIVGRLFSSNNDSRSKSEIVLLITPHIV 572 Query: 410 SS 411 + Sbjct: 573 HN 574 >UniRef50_B1XUD4 Type II and III secretion system protein n=1 Tax=Polynucleobacter necessarius subsp. necessarius STIR1 RepID=B1XUD4_POLNS Length = 509 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 97/427 (22%), Positives = 197/427 (46%), Gaps = 42/427 (9%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 K V L DV + ++ QA+ + +N++V +V GTV++ + +VPW +AL +++ G Sbjct: 89 KSFNVNLNFVDVDIRELAQAMTQVSGVNILVGDEVEGTVTVKINNVPWDKALDNILRIKG 148 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----------PLENRSITLQYADA 129 L + ++ I +AR E E+ R + L Y Sbjct: 149 LSKSVD-PGSNIIRIQKPETVLARDEFERKRLEEVSRQIAAKRIVSTQVTEIFRLYYTKP 207 Query: 130 GELAKAGEKLLSAKGS---------------MTVDKRTNRLLLRDNKTALSALEQWVAQM 174 + K E + +T D+R N ++++ ++ + + + ++++ Sbjct: 208 AIVKKQLEAIFGGNTGAAGAQATRPPGGIIEITTDERINSIIVKGTQSEMELVAKLISKL 267 Query: 175 DLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGV--------GQVTTLGSDLSVA 226 D+ +V + A IV ++ ELG ++ + G G V L + + Sbjct: 268 DIRTQEVLIEAFIVEADDDWQYELGSRFGYRNTTGNGTSTNPTSAVGGAVGDLANANIFS 327 Query: 227 TATTHVGFNIGRI---NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 T F +G + L +EL+A+E+ + II++P + + A + G +IPY Sbjct: 328 RPVTGAPFGLGYLFQTTASQLKVELTAMEKLSLVKIISNPHVFTMDNEEAVVIDGVQIPY 387 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 V + + EFK+A L + TP+++ G + L + ++++ P +I+K Sbjct: 388 PVPGVGTNQITYEFKDAALKLTATPSIVGDGNLFLNMIVNKDSPNYSTS-----PPSINK 442 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 +E+ +++ ++ G +GGI+ + ++ + VPLLG IP G LF + K D++ +L+VF Sbjct: 443 REVRSKLLIQDGTIAVIGGIYDQTKENTVEKVPLLGSIPLLGSLFSYTRKADKKTQLLVF 502 Query: 404 ITPRLVS 410 I P++++ Sbjct: 503 IAPKILN 509 >UniRef50_A8PP54 Putative fimbrial assembly protein PilQ n=1 Tax=Rickettsiella grylli RepID=A8PP54_9COXI Length = 442 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 123/429 (28%), Positives = 214/429 (49%), Gaps = 36/429 (8%) Query: 2 KQWIAALLLMLIPGVQAA--------KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPD 53 K+ I +L L + Q K +K+TL + + V L+ L+E NL++ Sbjct: 7 KKIIFSLFLAIALNFQLVAHENSFEKKDEKITLNFNHINVNAALRYLSELNNNNLIIDEI 66 Query: 54 VSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQA 113 + G +S++L DV W QAL ++++ GL + + + + Q Sbjct: 67 IQGKLSIYLHDVSWDQALDCILQTRGLAKQAIPHGWFITTAENLLKQEKVNSDIQKEKNN 126 Query: 114 NLPLENRSITLQYADAGELAKAGE----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQ 169 PL + I ++Y A E+ K + LLSA+ + D TN L ++D+ ++ + Sbjct: 127 LCPLIFKVIPIRYRKASEIIKLLKDKANTLLSAQAIVNADNLTNSLWIKDSPVQMNRIIH 186 Query: 170 WVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVT------------ 217 + ++D P+GQ+ + A +V+I++ +ELG ++ L+ + + + T Sbjct: 187 LIKKLDKPIGQILIEARVVSIDQNKEKELGAQFNLSRMRPVNDLLKSTLRNEVSNQNTHL 246 Query: 218 --TLGSDLSVATATT----HVGFNIGRIN-GRLLDLELSALEQKQQLDIIASPRLLASHL 270 L DL + +A + +G + + LDLELSALE++ ++I++P L+ + Sbjct: 247 LQHLTMDLPLFSANSLGLASLGLRLLNLGKNSFLDLELSALEKEGAAEVISTPHLITADQ 306 Query: 271 QPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV 330 QPA I+ G EIPYQ + G + + FK+AVL ++VTP ++ + RI L L ++Q+ P V Sbjct: 307 QPAFIEAGDEIPYQEKASGGGTSLI-FKKAVLSLKVTPQIMPQERIILDLEVNQDQPNSV 365 Query: 331 LQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRH 390 + A I + I+TQ+ VKSGET+ LGG++ + VP LG +P G+LFR Sbjct: 366 MVDA----PTIKARGIKTQIIVKSGETIVLGGVYEYSQGKLEQRVPFLGSLPLIGRLFRL 421 Query: 391 DGKEDERRE 399 + R E Sbjct: 422 TKVYNRRSE 430 >UniRef50_B5S3N0 Gspd-related protein n=4 Tax=Ralstonia solanacearum RepID=B5S3N0_RALSO Length = 754 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 187/404 (46%), Gaps = 27/404 (6%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQALQ 72 + AA + ++L D + QV + L+ LN V DV V++ L + + Sbjct: 176 ALSAAFRKPISLEFHDAQMRQVFEVLSRASGLNFVFDKDVRTDQKVTVFLRNSTVASVVN 235 Query: 73 TVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 TV+ + L R +GN + ++ N A+Q Q PL R+ L +DA + Sbjct: 236 TVLLTNQLEQRVLDGNAILIYP-----NTPAKQRDYQ-------PLTVRTFVLSNSDAKD 283 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +A + +L + + VD++ N +++RD A+ A E+ VA ++P +V L I+ + Sbjct: 284 VANTLKTILKTR-DIVVDEKRNMIVMRDTPDAIQAAEKLVAVHEMPEPEVMLEVEILEVK 342 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 L++LG++ + TL D T +G + L++ ++A Sbjct: 343 RSRLQDLGIQLPSQLSLTPLASSSGGTLTLDDLRHLNPTRIGATV-----SPLNVNVNAA 397 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIP-YQVSSGESG--ATSVEFKEAVLGMEVTP 308 +++A+PR+ + + A I+ G +P +S +G A +V++ + L +EV P Sbjct: 398 VTDT--NVLANPRVRTRNKEKARIQVGQRVPNVTTTSTATGFVAENVQYVDVGLKLEVEP 455 Query: 309 TVLQKGRIRLKLHISQ-NVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 TV + +++++ ++ QV ++ I + T + +K GE L G+ + Sbjct: 456 TVTPDNEVTIRINLEVSDIISQVQTKSGSIAYEIGTRNATTLLRLKDGENQILAGLIQDE 515 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 ++ + VP LGDIP G+LF + E+V+ ITPR++ Sbjct: 516 DRVSGNRVPGLGDIPALGRLFGAQSDNKLKSEIVLSITPRVIRP 559 >UniRef50_C6P0F2 Type II and III secretion system protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0F2_9PROT Length = 851 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 103/423 (24%), Positives = 187/423 (44%), Gaps = 34/423 (8%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWK 68 M +P +++ Q VTL D + V +AL+ +N+++ D+ S+ + D Sbjct: 172 MQMPTLKSKFRQPVTLQFRDANLKMVFEALSRSSGINILLDRDMRNDLKASIFVKDASVA 231 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 AL ++ L E +L+ ++ N A+ + Q L R+ L AD Sbjct: 232 DALDLILMQNQL----EKKVLNDSTVFIYPNTPAKIKEYQ-------DLVIRTFQLTNAD 280 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 A ++ + +L K + V+++ N L++RD A+ E+ +A D+ +V L ++ Sbjct: 281 AKQMQTMIKTMLKTK-DIYVNEKNNSLIIRDTPEAVKMAEKLIASQDINEPEVMLEVEVL 339 Query: 189 TINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVG-----------FNIG 237 + L +LGVKW +T + A TT+ N Sbjct: 340 EVLHSKLTQLGVKWPNQLGLSVNATPATSTATTTSGGAVVTTNTPAVPLTVNGLRHINGD 399 Query: 238 RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT---- 293 IN L + L ++ +++ASPR+ + A I G +P +S AT Sbjct: 400 AINVTPLSMTLDLRKELGDSNLLASPRIRVKQHEKAKIMIGDRVPVITNSVTPVATGTPV 459 Query: 294 ---SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQN-VPGQVLQQADGEV-LAIDKQEIET 348 SV++ + L +EV P + G + +K ++ + + QV A G V I + + T Sbjct: 460 VTGSVQYLDVGLKLEVEPDIHMDGEVAIKTYLEVSTIANQVTNAASGSVAYQIGTRNVNT 519 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 + +K GET L G+ +++ SVP LGD+P G LF +G + + E+++ ITP + Sbjct: 520 VLRLKDGETQVLAGLINDEDRKSSASVPGLGDLPILGHLFSSNGDDKRKTEIILSITPHI 579 Query: 409 VSS 411 + + Sbjct: 580 IRN 582 >UniRef50_P03668 Putative assembly protein ORF430 n=1 Tax=Pseudomonas phage Pf3 RepID=VG430_BPPF3 Length = 430 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 123/419 (29%), Positives = 210/419 (50%), Gaps = 16/419 (3%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 M + I AL+L A ++T+ ++ + + +A+ ++V+ P + G VSL Sbjct: 1 MIRSIIALMLSFALVPFAFASDRLTVKHHEIDIRVAIPLVADFCGRSVVLGPSIQGVVSL 60 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQA---RAQANLPL 117 DVP QA +++S L++ G++L + ++ N+ + + + + Sbjct: 61 DFDDVPCSQAFDLLLESNHLLSSMVGDVLVITAMDQVLNSERKADDLRTFRRDLFNANDI 120 Query: 118 ENRSITLQYADAGELAKAGEKLL----SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQ 173 E R I + +A A E+ ++ + SMTVD+RTN + + ALE + Sbjct: 121 ERRVINIVHASASEVVSLFKESFMSLDAPGMSMTVDERTNSVFAALPSSFFPALESVIQA 180 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVG 233 +D+PV QV + A++V + + LG+ W A G VT DLSVA A + +G Sbjct: 181 IDVPVRQVAIEANVVEASVDWSKRLGLNWG--GALSLGNWSAVT--AGDLSVA-AGSSIG 235 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 F N LD +A+E + +++ P LL Q AS+ +G+E+PYQ S+G+ GAT Sbjct: 236 FGFLS-NTLSLDGLFTAMENEGNGRVVSRPTLLTLDRQSASVLRGTELPYQQSAGD-GAT 293 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 SV FK A L +EV P + I +++ +S++ P A V ID + T + V Sbjct: 294 SVAFKHAALSLEVKPVISPDNSIVIEVLVSRDSPN--FSNAIDGVPPIDTNRLVTTIRVP 351 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G+T+ LGG+++ N+ G V + IP G+LF+ E+ EL++F+TPR++ E Sbjct: 352 HGQTVVLGGVYSTINQQGSSRVSGISRIPGIGRLFKKKEHVTEQYELLIFLTPRILGLE 410 >UniRef50_Q47JK8 Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal n=2 Tax=Betaproteobacteria RepID=Q47JK8_DECAR Length = 715 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 120/435 (27%), Positives = 209/435 (48%), Gaps = 45/435 (10%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 +V++ + V +L+ +AE+ LN V+S V+GT +L L DVP Q + + + GL Sbjct: 277 RVSINYQNGDVRALLRLMAEELGLNAVISETVTGTTTLVLKDVPADQVIDIIFQQKGLDM 336 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK-------- 134 R++GNI+ + + + + PL+ L Y A ++A+ Sbjct: 337 RKKGNIIMIAPRDEIATREKLEFESKQQISELEPLKLEQFQLNYQKAADVARLLAGLPPL 396 Query: 135 ---------------AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 A +++LS +GS D ++N + + D + L + ++A +D Sbjct: 397 GAAGAAAAPAPGTNVAAQRILSKRGSAVADPQSNIIFINDIPSKLEEIRSFIAAIDTGAR 456 Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQ-----------------HAGGVGQVTTLGSD 222 QV + A +V + R LG K+ + Q AG +G + Sbjct: 457 QVLIEARVVEAQDSFNRALGGKFGFLNKQAVQPAGSGINVAGGSSTTAGQSTSTPMVGVN 516 Query: 223 LSVATATTHVGFNIGRIN-GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEI 281 L + + ++ + R+L+LEL+ALE I++SPR++ ++ A I+ G+EI Sbjct: 517 LPSPSTGGSLALSLFTASFSRILNLELAALESDGLGKIVSSPRVITANNVKAKIEDGTEI 576 Query: 282 PYQVSSGESGAT--SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG--QVLQQADGE 337 PY + G T +V FK A L +EVTP + +G +R+ L + + + + Sbjct: 577 PYVTTQSSGGTTTATVSFKPAKLSLEVTPQITPEGTVRMNLVVKKEEADWTKAVVLNGYA 636 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 I +ET V V++G T+ +GG+F ++ + VPLLGDIP+FG LF++ +R Sbjct: 637 NPPIKSSVVETNVVVENGGTVVIGGVFITDTQNSVEKVPLLGDIPFFGWLFKYKNDIGKR 696 Query: 398 RELVVFITPRLVSSE 412 REL+VFITPR++S + Sbjct: 697 RELLVFITPRVISDK 711 >UniRef50_Q1LE58 Type II and III secretion system protein n=6 Tax=cellular organisms RepID=Q1LE58_RALME Length = 734 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 86/404 (21%), Positives = 176/404 (43%), Gaps = 37/404 (9%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV--SLHLTDVPWKQALQTVVKSAGL 80 VTL D + V +AL+ LN++ DV + ++ +T+ + A+ ++ L Sbjct: 178 PVTLQFRDANIRMVFEALSRTSGLNVIFDRDVRADLKTTIFVTNAAIEDAVDLIL----L 233 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 ++ + +L+ +++ A+Q+ Q L+ R+ L D+ ++ + LL Sbjct: 234 QSQLDKKVLNANTLFIYPATPAKQQEYQE-------LKVRTFQLSNVDSKQVQSLLKSLL 286 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 K + VD+R N + +R + EQ +A DLP +V L ++ ++ + L +LG+ Sbjct: 287 KIK-EVVVDERANTVTIRGTPDTIRVAEQMIAAQDLPEPEVMLEVQVLEVSRERLTDLGI 345 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDII 260 W T+ + S T + L + +++ Sbjct: 346 AWP-----------NSFTMATPASATTWGVLHHLTANELEVSPLSATANFKLTDTDANLL 394 Query: 261 ASPRLLASHLQPASIKQGSEIPYQVSSGESG------ATSVEFKEAVLGMEVTPTVLQKG 314 ASPR+ + + A I G ++P SS ++++ + + +EV P V + Sbjct: 395 ASPRIRTRNKEKARILIGDKVPVISSSSTPSTSGPSFTQTIQYLDVGIKLEVEPQVYRDN 454 Query: 315 RIRLKLHISQNVPGQVLQQADGEV------LAIDKQEIETQVEVKSGETLALGGIFTRKN 368 + +KL + + + +Q + + I + T + ++ GET LGG+ + ++ Sbjct: 455 DVGIKLALEVSNITKTIQSGNAQTGLSSLAYQIGTRSASTSLRLRDGETQILGGLISDQD 514 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 ++ D VP LG +P G+LF + + E+V+ ITP +V + Sbjct: 515 RTSADKVPGLGQLPVVGRLFSDHNGDHVKTEIVLQITPHIVRPQ 558 >UniRef50_Q5P7D0 General (Type II) secretion pathway (GSP) D protein n=3 Tax=Rhodocyclaceae RepID=Q5P7D0_AZOSE Length = 771 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 99/423 (23%), Positives = 184/423 (43%), Gaps = 36/423 (8%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWK 68 L + + VTL D P+ V +AL+ LN V DV V+L + D Sbjct: 172 PLAEALTGPLSKPVTLQFRDAPLRVVFEALSHAAGLNFVFDRDVRVDTPVTLFVRDSSVD 231 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 + ++ V + + E +L+ +S+ A+Q Q L RS L AD Sbjct: 232 EVIKLVAVTQ----QIERKVLNANSVLIYPATPAKQRDYQE-------LVTRSFYLANAD 280 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 A + ++L+ +K M +D++ N L+++D A+ E+ +A +D+ +V L ++ Sbjct: 281 AKQAQSLLKQLVKSK-DMFIDEKLNLLVIKDTPQAVRLAERLLASLDVAEPEVMLEVEVL 339 Query: 189 TINEKSLRELGVKW--------------TLADAQHAGGVGQVTTLGSDLSVATATTHV-- 232 + LRELG+ + AG V +V TL Sbjct: 340 EVARSKLRELGLDFPDEIGYGLLRSQQQITQTQTAAGIVSEVVTLPGSEIAPGVVPRAQW 399 Query: 233 GFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG- 291 G G + L L L A + +++A+PR+ + + A I G ++P ++ + Sbjct: 400 GDLTGYVTNPALTLRLRA--EDGDTNLLANPRIRVKNREKAKIHIGEKLPVFTTTSTANV 457 Query: 292 --ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQ-NVPGQVLQQADGEVLAIDKQEIET 348 + SV + + L ++V P V + +K+ + N+ +V +D + + T Sbjct: 458 GVSASVSYLDVGLKLDVEPAVTLDDEVAIKVALEVSNIVREVPGPSDSLAYQVGTRSATT 517 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 + +++GET L G+ + + + +P LGD+P G+LF + + E+V+ ITPR+ Sbjct: 518 VLRLRNGETQVLAGLISDEERRSAQRLPGLGDLPLIGRLFSSERNNASKTEIVLLITPRI 577 Query: 409 VSS 411 V + Sbjct: 578 VRN 580 >UniRef50_C8X4Q5 Type II and III secretion system protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4Q5_DESRD Length = 499 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 108/428 (25%), Positives = 201/428 (46%), Gaps = 45/428 (10%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 +KV+L D + +L+ LA N+V+S ++SGT+SL + D+PW QA +V+ + GL Sbjct: 75 REKVSLKFRDNKIQVILRTLASAASQNIVMSNNISGTMSLDVKDIPWSQAFLSVITTNGL 134 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYA------------- 127 +G+I+ V S Q+ ++ L+ + + YA Sbjct: 135 TYSWQGDIIQVQSPKDMQMEKELQQIQKETQI----LQTTVVDIDYAHIVDKGVKSGNTN 190 Query: 128 ---DAGELAKAGEKLL------SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 + +L K ++L S +G++ VD+ N L+++ K + + ++ P Sbjct: 191 DNGNLDQLEKTLREVLKNASGGSKEGTLFVDRENNALIIQATKEDTQRILHVLNHLERPR 250 Query: 179 GQVELSAHIVTINEKSLRELGVKWT---------------LADAQHAGGVGQ-VTTLGSD 222 Q+ + A IV + + RELG++W + DAQ G +TTL Sbjct: 251 KQIHIEASIVEATQNTARELGMRWRGRYVTSGRGIEDVGIIGDAQEPEDWGSAITTLPGS 310 Query: 223 LSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 + +G +G I G +L +L ALE++ Q++I+ASP L Q AS + G +P Sbjct: 311 GTDTLGGLKLGTVVGEIAGNVLFSQLQALEKEGQVNILASPSLTTMDNQSASTQHGERVP 370 Query: 283 YQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID 342 Y+ + E G V+F++ +G++V P +++ + + + ++++ I Sbjct: 371 YETT-DEDGDRVVKFEDVAMGLKVHPRIIEGDLMAMDIVVTKDEVDFSQNVQGN--PLIR 427 Query: 343 KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 402 +E ET + V++GET+ + G+ + + VP L +P LF+ K ++ E +V Sbjct: 428 TKETETNLLVRNGETIVISGLSKQTVSGTEHGVPGLRKVPGLSWLFKGIDKSEDMEEFMV 487 Query: 403 FITPRLVS 410 FITP ++ Sbjct: 488 FITPTILD 495 >UniRef50_Q1H1N3 Type II and III secretion system protein n=2 Tax=Methylophilaceae RepID=Q1H1N3_METFK Length = 653 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 89/408 (21%), Positives = 186/408 (45%), Gaps = 25/408 (6%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQAL 71 P ++++ + ++L D+ + V + +++ +N ++ S+ L + P ++A+ Sbjct: 185 PHIRSSFKRPISLEFKDITIKSVFEFISQAAAINFTYDQELRSDQRTSVFLRNTPIEEAI 244 Query: 72 QTVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 ++ S L + N L ++ ++ R+Q RS L DA Sbjct: 245 DVILASNQLGKKVLNDNTLLIYPLS--------------RSQEYQETFVRSFYLSNTDAK 290 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 +L + ++ K + +D++ N L++RD A+ E+ + D+ +V L ++ I Sbjct: 291 KLMAMIKTVVKTK-DIYIDEKLNTLVMRDTPEAIRTAEKLIMSQDMAEPEVMLEVEVLEI 349 Query: 191 NEKSLRELGVKWTLA---DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE 247 N +SL +G+++ D Q V TTL + N+G + L Sbjct: 350 NRRSLENIGIRYPTNVSLDVQGRDTVNGTTTLTPGKLTINELKNFNSNLGVFSISDPVLA 409 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGM 304 L+ L+Q +++A+P + + + A I G IP S S + +V + E + + Sbjct: 410 LNLLQQDTDTNLLANPHIRVKNREKAKIHVGDRIPVLTSVANSTGFISQTVNYIEVGVKL 469 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGI 363 +V PT+L + + +K+ + + ++ + G V I + T + +K GET L G+ Sbjct: 470 DVEPTILLRDEVSIKIGLEVSNQTDRMETSSGTVTYTIGTRNASTILRLKDGETQILAGL 529 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + VP L +P G+LF ++ + ++E+ +FITPR++S+ Sbjct: 530 MRNDEQKITNGVPGLSKLPLIGKLFNNNNNDLSKKEIALFITPRIISN 577 >UniRef50_A6W2T5 Type II and III secretion system protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2T5_MARMS Length = 393 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 114/408 (27%), Positives = 209/408 (51%), Gaps = 22/408 (5%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH 61 K+ LL+ G A++ + + + + +VL LA Q ++V+SP++ ++L Sbjct: 3 KRLYYGLLVFFFLG--ASRVLAMDVYFESRSLQEVLPWLASQMNESVVISPEIDDVLTLS 60 Query: 62 LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRS 121 + D WK ++ + + + +G++ + + + + ++ + Sbjct: 61 IKDASWKDVMEAIAQLPHIQLEWQGHVAVLMPV--------KTPLADSTEPTSVMCQRAY 112 Query: 122 ITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQV 181 L++A A ++ + L S+ VD RTN ++ + T+ +++ + +D P+ Q+ Sbjct: 113 WVLKHAKAKDVG-VHLRALHPSISLVVDDRTNSIIAH-SCTSFEGIQETLDWLDTPLKQI 170 Query: 182 ELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRING 241 E+SA I ++ + + GV W A+ + GV DL T TT + F+ +G Sbjct: 171 EISAQIAQVSRTAQSQFGVNWQ---AKLSDGVRSSIGGAVDLGALTPTTSLDFSSIGGSG 227 Query: 242 RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAV 301 LL L L +E + ++++ P+++ S PA I+ G+E+PYQ S + S+EF++AV Sbjct: 228 -LLALTLDMMESEGLANVVSKPKIVTSEGLPARIESGTEVPYQTVSDDK--VSIEFRQAV 284 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 L +EVTP V G I L L I Q+ G ++ V ++ ++TQV VK+ ETL LG Sbjct: 285 LMLEVTPFVKDSGHILLSLTIHQDSVGDLVNG----VPSLKTNRLKTQVVVKNQETLVLG 340 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+F + + VP DIPW G+LF+ ++ E+ EL+VFITP+L+ Sbjct: 341 GVFREERFESESRVPFFSDIPWLGELFKRQSEQQEKVELLVFITPKLL 388 >UniRef50_Q2LWT2 Type IV secretion n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWT2_SYNAS Length = 590 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 108/426 (25%), Positives = 194/426 (45%), Gaps = 85/426 (19%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 QK++L D + VL+ LAE +++V PDV G+V++H+ DVPW QAL+T++ GL Sbjct: 201 GQKISLDFQDADIRAVLRLLAETGGVSIVAGPDVKGSVNVHMRDVPWDQALETILDIHGL 260 Query: 81 ITRQEGNILSVHSI-AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 ++ GN++SV S+ + + R+ AE+ + +A + R + L Sbjct: 261 AKKEMGNVISVMSLEKKKKDEEVRKAAEKDQIEAEANRKKRE---------------QDL 305 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 L+ KG + Q+ + A IV +E+ ++ LG Sbjct: 306 LAEKGRL--------------------------------RQISIEAKIVEASEEFIKNLG 333 Query: 200 VKWTLA----------------DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI---- 239 V W A + + G + + T+ G + + Sbjct: 334 VTWGGAVSARMGSYPFQAAYGTNTRTTEGQTNPVSYPYPAGIGYTTSGTGAVLSQAAVNM 393 Query: 240 ----------------NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 + +LD++++ALE II++P++ A IKQG EIPY Sbjct: 394 PGSIIGTPTLGVVIGGSKAVLDVQIAALESTSSGKIISTPKVTTMDGVTAKIKQGEEIPY 453 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 + + G V FKEAVL +EVTP++ GRI ++++ + + G+ + I K Sbjct: 454 -TTYDDKGYPRVNFKEAVLKLEVTPSITPDGRISMQINATNDRGDYAKAGILGDNVPIIK 512 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 E++++V V+ G T+ +GG+ + + VP L IP G LF+ + + R++L++F Sbjct: 513 NEVDSKVVVEDGTTIVIGGVSKTTDDTSTSGVPWLSRIPVLGWLFKSENTDRTRKQLLIF 572 Query: 404 ITPRLV 409 +TP+++ Sbjct: 573 VTPKII 578 >UniRef50_Q0BFS7 Type II and III secretion system protein n=7 Tax=Burkholderia RepID=Q0BFS7_BURCM Length = 812 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 88/402 (21%), Positives = 179/402 (44%), Gaps = 24/402 (5%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT--VSLHLTDVPWKQAL 71 P + A + V+L P+A + ++ +N V DV + +L + A+ Sbjct: 169 PQLSDALRKPVSLNFKQQPLANIFDVISRVSGVNFVFDRDVDTSHAATLFAERTTAEDAI 228 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 ++++ L E +L H++ + + A R+ L +ADA Sbjct: 229 NLLLRTNQL----EKKVLDRHTLLVYPSQPEKARNYTEFA-------IRTFFLSHADAKS 277 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 + A +++ K + VD+R N +++RD + E+ V +D+P +V L ++ +N Sbjct: 278 VMAALRQMIKPK-DVYVDERVNAVVMRDTPETIQVAERVVMGLDIPQSEVTLDVQVLEVN 336 Query: 192 EKSLRELGVKWT--LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELS 249 +LGV++ + G G TLG L + V G L L + Sbjct: 337 MNDSLDLGVQYPGKIQFNALGGVEGGALTLGDLLRLNRDRVGVSSESGG-----LALAID 391 Query: 250 ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS--VEFKEAVLGMEVT 307 L+++ + +A+P++ +++ A+IK G +P ++ +G + V +++ L ++V Sbjct: 392 LLQKQGKTKTLANPKIRVRNMEKANIKIGERVPIVTTTNANGVVTESVSYQDVGLMLKVE 451 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFTR 366 P + + +K+++ + G V ++ + ET + K+GET L G+ R Sbjct: 452 PRISLNEEVSVKVNMEVSSILTKETTKTGLVAYSLGTRNAETLMTAKNGETQILAGLVKR 511 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 +P + +P G+LF +G+ +ER E+V+ ITP + Sbjct: 512 NESDSVAGLPGVSGLPVLGRLFGSNGRSNERSEIVLLITPHI 553 >UniRef50_A6C2R4 Type IV pilin multimeric outer membrane protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2R4_9PLAN Length = 799 Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats. Identities = 95/429 (22%), Positives = 182/429 (42%), Gaps = 49/429 (11%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + +L + D + QVL L E LN++ V+GT+S +L +V QAL +++S Sbjct: 277 SSETFSLQIQDAEIMQVLDMLGELSGLNILTGQGVTGTISANLKNVTPAQALDAILRSRD 336 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 L + +EG + V + Q + + +++ + + + Y A EL + Sbjct: 337 LTSEKEGEFIYVMT----------QAQLELKKKSSRKVITKLYSPFYISAKELQNLITPI 386 Query: 140 LSAKGSMTV--------------------DKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 L+ + +T+ +L+RD L +++ + +MD+P Sbjct: 387 LTENVGIVSLTSPSEVGIAPDPTSAGGDSFAQTDSILVRDYPEILEEVDRLLEKMDIPPM 446 Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQH-------AGGVGQVTTLGSDLSVATATTHV 232 QV + A I+++ + GV + + + G + ++ Sbjct: 447 QVVIEAMILSVALNDDMKFGVNFAMLGGNNKNLVVDGNGNTLNNASGFPGSGSSSIVPPT 506 Query: 233 GFNIGRINGRLLDLE-------LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 G I + G + ALE + ++IASP+L A + Q A + G I Y Sbjct: 507 GQFIADVAGLKYGFLHGDISGFIEALEDVTETNLIASPQLRALNKQKAELIIGDRISYST 566 Query: 286 SS--GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 + G + +V F ++ + + + P + G+IR+++H ++ + + Sbjct: 567 VTQNGNTSIQNVNFLDSGIVLNLRPFITPDGQIRMEVHPERSS---ATINPSTNLPDLRT 623 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 E+ T V V+ G T+ +GG+ + ++ VP LG +P G FR + R EL+V Sbjct: 624 TEVTTNVMVRDGHTVVIGGLIEERTSDTRNQVPFLGALPVIGNAFRQQREITNRTELIVL 683 Query: 404 ITPRLVSSE 412 ITPR+V +E Sbjct: 684 ITPRIVRAE 692 >UniRef50_C1ZJR8 Type II secretory pathway, component PulD n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJR8_PLALI Length = 915 Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats. Identities = 104/436 (23%), Positives = 198/436 (45%), Gaps = 57/436 (13%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 PG +K L V+ + +VL+ LA+ +N++ SP+V G V+++L V + AL Sbjct: 340 PGGNVTSDEKFDLQVEQAELPRVLELLAQMAGINILTSPEVVGKVTVNLQGVTLEAALDG 399 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 ++++ G + ++EG+++ V + +AR A+ + + Y + EL Sbjct: 400 LLRTRGYLYQREGDMVFVMTA----------REAEARRLASRKVLTKIYQPNYINVKELQ 449 Query: 134 KAGEKLLSAK-GSMTVDKRTN-------------------RLLLRDNKTALSALEQWVAQ 173 + + +L+ G +++ ++ LL++D + ++ +++ + + Sbjct: 450 QLVQPILTPTLGKVSITSPSSVGIAENATDAGGDSLSQRDALLVQDYEEVINEIDRVIIE 509 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ-----------------HAGGVGQV 216 MD+P QV + A I+++ GV L GG G + Sbjct: 510 MDIPPLQVIIDAKILSVKLTDDMAFGVNLALLGGDKNLAVTGNGASIATSSGFPGGTGSI 569 Query: 217 TTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK 276 G+ TA GF G I G + ALE ++ASP++ A + Q A + Sbjct: 570 IPPGAQFLANTAGLKYGFIAGDITG-----FIRALESIADTSLVASPQIRALNKQRAEMI 624 Query: 277 QGSEIPYQVSSGESGAT--SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 G+ + Y+ + S T +V F E+ + + P + G +R+++H ++ + + Sbjct: 625 IGNRLSYKTLAFNSTQTIENVNFLESGTKLIIRPFIAPDGLVRMEVHPERS---RAVINQ 681 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 + D E+ T V V+ G+T+ +GG+ + ++ D VP+LG IP G FR+ Sbjct: 682 STGLPDQDTTEVTTNVMVRDGQTVVIGGLISEESTESIDRVPVLGAIPLVGAAFRNKSSR 741 Query: 395 DERRELVVFITPRLVS 410 ER EL+V ITPR+V Sbjct: 742 IERTELIVLITPRIVD 757 >UniRef50_B8E238 Type II and III secretion system protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E238_DICTD Length = 1421 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 87/387 (22%), Positives = 174/387 (44%), Gaps = 28/387 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V+ + + +VL+ L ++ +N V+ V+G + L+L V + L+ + + + Sbjct: 1062 VSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNRVELPETLEILSRITNISFE 1121 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 + G+ V + A+ P + L+Y L + + Sbjct: 1122 KVGSATFVKPL----------NTTVTTAKEGTPTVTKEYKLKYISLDTLKSVVSGI-AKD 1170 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 S D+ + LL++ +S++E +A++D P QV++ ++ ++ ++++++G++W+ Sbjct: 1171 VSFYYDQTSGLLLVQGPADQVSSVESMIAKLDKPTPQVKIDVQVIEVSRENVKDIGIEWS 1230 Query: 204 LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASP 263 ++ + L + + +N + + ALE + + I+A P Sbjct: 1231 ------------TGSISTGLQITANLGWQDLRVSIVNPGQISANIRALETQNKARILAQP 1278 Query: 264 RLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 + + I G +P +S G V F + + + VTPTV G I ++ Sbjct: 1279 SMTTLSGKATRIMIGDRVP-LISYDAQGNRQVSFVDVGIILNVTPTVNADGTITANINPQ 1337 Query: 324 QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPW 383 + +Q +V I +E +T V +K+GETLALGG+ ++ VPLLGDIP Sbjct: 1338 VS----TIQGYVSDVPIISTREAQTIVNLKNGETLALGGLLRQEEIDSMSKVPLLGDIPI 1393 Query: 384 FGQLFRHDGKEDERRELVVFITPRLVS 410 G+LF+ + REL++ ITP+L+ Sbjct: 1394 LGELFKARKTQKVERELIILITPKLIE 1420 Score = 93.4 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 72/162 (44%), Gaps = 13/162 (8%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV 75 V+ Q++++ D + VL+A+ + LN++ V G +S++L D+P+K A ++ Sbjct: 306 VKDKFQQRISVSFDRAEIRDVLKAMGQLVGLNIITDIGVQGRISVYLKDIPFKDAFYALL 365 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 S+ L Q+G I+ V ++ + + L + L+Y ++ + Sbjct: 366 ASSDLGYIQQGEIIIVA------------NLDKLQKIESRDLMTKVYQLKYFESQKAKDI 413 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 K+ S D N L++ + + +E + +D+P Sbjct: 414 LSKI-SKTAIFDSDDSRNWLIVSAPPSEFAKIENTIKTLDIP 454 Score = 85.3 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 73/173 (42%), Gaps = 13/173 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 VT + + VLQ +A + LN ++ P VSGTV L + VP + L + + A Sbjct: 576 VTASLKKSDIRDVLQEIASKTDLNFIIDPKVSGTVDLFVNKVPLDEVLTIIQRLANFDME 635 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 + G + E A + + L+Y ++ + G L+ Sbjct: 636 KVGKTYYIKP------------KEVQTATVPQIISTKLYVLRYITLQDILRVGGSLVK-N 682 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 S++ D +T L+ + + L L+ ++++D+ + ++ ++T+ + + Sbjct: 683 LSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKKEAVVAKELLTVEREGDK 735 Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 72/173 (41%), Gaps = 13/173 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V+ + + +VL+ L ++ +N V+ V+G + L+L V + L + K L Sbjct: 900 VSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNRVELPEVLNIIQKVGKLSIT 959 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 E + V E+ + + L+Y ++ + G L+ Sbjct: 960 TEDKVTYVKP------------YEEKVTVPVEVAKTKIYALKYITLSDIERVGGSLVK-N 1006 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 S++ D +T L+ + + L L+ ++++D+ + ++ ++T+ + + Sbjct: 1007 LSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKKEAVVAKELLTVEREGDK 1059 Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 72/173 (41%), Gaps = 13/173 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V+ + + +VL+ L ++ +N V+ V+G + L+L V + L + + L Sbjct: 738 VSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNRVELPEVLNIIQRVGKLSIT 797 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 E + V E+ + + L+Y ++ + G L+ Sbjct: 798 TEDKVTYVKP------------YEEKVTVPVEVAKTKIYALKYITLSDIERVGGSLVK-N 844 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 S++ D +T L+ + + L L+ ++++D+ + ++ ++T+ + + Sbjct: 845 LSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKKEAVVAKELLTVEREGDK 897 Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 8/155 (5%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT- 82 VTL + +LQ + ++ N++ S DVSG V L L VP +A+ +V+S G I Sbjct: 478 VTLTAKGDDIKDILQEIVQKSGKNIIFSKDVSGGVYLTLNRVPLDRAVDLIVRSTGYIYE 537 Query: 83 -RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK--- 138 R+ G IL A + + E + + + + +L+ +D ++ + Sbjct: 538 VREGGVILVSAPKAEGVPSPIIEIKELVKVEKIGDVFYVTASLKKSDIRDVLQEIASKTD 597 Query: 139 ---LLSAKGSMTVDKRTNRLLLRDNKTALSALEQW 170 ++ K S TVD N++ L + T + L + Sbjct: 598 LNFIIDPKVSGTVDLFVNKVPLDEVLTIIQRLANF 632 >UniRef50_C6WVN7 Type II and III secretion system protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVN7_METML Length = 659 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 91/409 (22%), Positives = 186/409 (45%), Gaps = 25/409 (6%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT--VSLHLTDVPWKQA 70 IP +++A + +TL +V V V + + + +N ++ S+ + D P + A Sbjct: 183 IPQIKSAFKKPITLEFKNVSVRSVFEFIGKAANINFSYDQELRDNQRTSIFVRDTPIEDA 242 Query: 71 LQTVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 +Q ++ + L + N L ++ ++ R+Q L RS L DA Sbjct: 243 IQVILTTNQLAKKVLNDNTLLIYPVS--------------RSQEYQELYVRSFYLNSIDA 288 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 + +L +K + +D++ N L++RD ++ E+ +A DL +V L ++ Sbjct: 289 KRAMNLIKTVLKSK-DVYIDEKLNTLVMRDTAESIEIAEKLIASQDLIEPEVMLEVEVME 347 Query: 190 INEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATT---HVGFNIGRINGRLLDL 246 IN +SL +GV++ + G + ++ + + +G L Sbjct: 348 INRRSLENIGVRYPSQVSVGVQGKTSSNGVSTNTPGRLSLAELKNFNSGLGVFTISDPVL 407 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLG 303 L+ L Q +++A+P++ + + A I G +IP S S + +V + E + Sbjct: 408 ALNLLHQDTDTNLLANPQIRVKNREKAKIHVGDKIPVFTSVANSTGFVSQTVNYLEVGIK 467 Query: 304 MEVTPTVLQKGRIRLKLHISQ-NVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 ++V PT+L + ++ +K+ + N+ QV I + T +++K+GET L G Sbjct: 468 LDVEPTILLQDQVNIKVGLEVSNITDQVKTDTGVLAYTIGSRNANTTLQLKNGETQILAG 527 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +F ++ + VP L +P+ G+LF + + E+V+ ITPR++ + Sbjct: 528 LFRDDGQNISNKVPGLSSLPFIGRLFTDKNNDKRKNEIVLLITPRILHN 576 >UniRef50_C4V5Y4 Fimbrial type IV assembly protein pilQ n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V5Y4_9FIRM Length = 428 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 108/447 (24%), Positives = 188/447 (42%), Gaps = 57/447 (12%) Query: 1 MKQWI-AALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS 59 MK+WI A LL L+ VT+ V V VL A A L L+V V+GTV+ Sbjct: 1 MKRWIITAALLGLLLSAAPVSAASVTVDVTGGDVRSVLLAAARMGNLPLIVDDSVTGTVT 60 Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN 119 HLT ++ L + + G+ + G++ W +A++ Sbjct: 61 AHLTGE-AEEVLHLIAAARGIHLERHGDV-------WLALGTEVHDAQR---------RV 103 Query: 120 RSITLQYADAGELAKAGEKLLSAKG------------------------SMTVDKRTNRL 155 + T++YAD ELA A L+ +G + VD TN L Sbjct: 104 HTYTVRYADPEELAHAANLSLTGEGKRAIVSKPNKDIGESGDQSSDVQRRVLVDTATNTL 163 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLAD-------AQ 208 L ++ A+ + V+ +D QV L A +V +++++ +ELGV W+ + + Sbjct: 164 LFYGTESEAFAVREIVSALDTAPRQVSLEARVVAVSKRAAKELGVDWSWSSLPQYPNVTR 223 Query: 209 HAGGVGQVTTLGSDLSVATATTHVGFNIGRIN---GRLLDLELSALEQKQQLDIIASPRL 265 + G V+ + + +A + F G + AL + + ++A P + Sbjct: 224 DSAGNWHVSGRNAGTAGRSAPGVIRFGRGPEGLPYEFYYSAAIRALITEGKAKMLARPNV 283 Query: 266 LASHLQPASIKQGSEIPYQVSSGESGATS--VEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 + A I G+E+P V + + T+ +E++EA + + TP V G I +H Sbjct: 284 TTVQGREALINIGAEVPVPVVTTSNNVTTTGIEYREAGIILRYTPRVTADGNIVAHVHTE 343 Query: 324 QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPW 383 + P + D + K+ +T V +K+GET+ +GG+ +P LGD+P Sbjct: 344 VSTP---VFVDDLKAYRFQKRSADTTVRLKNGETMVIGGLIDSDESRTLAKIPFLGDLPL 400 Query: 384 FGQLFRHDGKEDERRELVVFITPRLVS 410 G FR EL++F+T ++ Sbjct: 401 LGAFFRTVRTSKNESELMIFLTAHVLD 427 >UniRef50_D2QZA3 Type II and III secretion system protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZA3_9PLAN Length = 854 Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats. Identities = 102/418 (24%), Positives = 193/418 (46%), Gaps = 36/418 (8%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 ++ A + + V D + +VL+ L++Q LN++ S V+GTV+ L++V + AL + Sbjct: 166 SIETAADDSLHINVKDSDIREVLELLSQQGGLNILASKSVTGTVTATLSNVDLETALAAI 225 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +KS G + R+EGNIL + + ++ + + R L R Y A ++ K Sbjct: 226 LKSTGYVARREGNILYIGT----PDDFSTMDQTADR------LITRVYRPNYVAAADVEK 275 Query: 135 AGEKLLSAK-GSMTVDKRT-------------------NRLLLRDNKTALSALEQWVAQM 174 LL+ + G +TV + + +++RD + + L+Q ++ Sbjct: 276 LFTSLLTPEVGKVTVSSPSEIDIPGDQVKTGGNGFAGADVVIVRDYENVIKQLDQVFIEI 335 Query: 175 DLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGF 234 D+ QV + A I+++ +GV + ++ + + L ++ + G Sbjct: 336 DVKPRQVLIEAMILSVRLSDNMTMGVNFEALRDKNNVRLVSGSPLTDLANID--LSEGGL 393 Query: 235 NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE--SGA 292 +G ++ L + + ALE ++IASPRL+ + Q A I+ G ++ Y ++ S Sbjct: 394 KLGFLDAS-LAVFIDALETVGDTNVIASPRLMCLNKQRAEIQIGEQLGYVSTTVTENSAT 452 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 SV F + + + P + G IRL++H + G V + + ++ T V Sbjct: 453 QSVNFLDVGTLLRLRPNIANDGLIRLEVHPELST-GTVSIEQGLTIPNKTVTQVTTNVMC 511 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 G T+ LGG+ + + +P LG +P G FR + ER E++V +TPR+VS Sbjct: 512 ADGCTVILGGLIRQDLTNNTSQIPFLGSLPLVGPAFRQKTETQERTEIIVLLTPRIVS 569 >UniRef50_B5YDZ7 Bacterial type II and III secretion system protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDZ7_DICT6 Length = 1256 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 89/387 (22%), Positives = 173/387 (44%), Gaps = 28/387 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V+ + + +VL+ L ++ +N V+ V+G + L+L V + L + K A + Sbjct: 898 VSCDLRGADIREVLRELGKKADINFVIDQKVTGQIDLYLNKVELPETLDILSKIASISFE 957 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 + G++ V + P+ + L+Y L + + Sbjct: 958 KVGSVTFVKPFTTAV----------VATKEGAPIVTKEYKLKYISLDTLKSVVSGI-AKD 1006 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 + D+ + LL++ +S++E +A++D P QV++ ++ ++ ++++++G++W Sbjct: 1007 VNFYYDQTSGLLLVQGPADQVSSVESMIAKLDKPTPQVKIDVQVIEVSRENIKDIGIEWG 1066 Query: 204 LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASP 263 ++ + L + I IN + + ALE + + I+A P Sbjct: 1067 ------------TGSISTGLQITANVGWQDLRISIINPGQISANIKALESQNKAKILAQP 1114 Query: 264 RLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 + + I G +P +S G V F + + + VTPTV G I L+ Sbjct: 1115 SMTTVSGKSTRIMIGDRVP-LISYDAQGNRQVSFVDVGIILNVTPTVNADGTITANLNPQ 1173 Query: 324 QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPW 383 + +Q +V I +E +T V +K+GETLALGG+ ++ VPLLGDIP Sbjct: 1174 VSTIQGYVQ----DVPIISTREAQTIVNLKNGETLALGGLLRQEEIESMSKVPLLGDIPI 1229 Query: 384 FGQLFRHDGKEDERRELVVFITPRLVS 410 G+LF+ + REL++ ITP+++ Sbjct: 1230 LGELFKARKIQKVERELIILITPKIIE 1256 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 13/162 (8%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV 75 V+ Q++++ D + VL+A+ + LN++ V G +S++L D+P+K A ++ Sbjct: 304 VKDKFQQRISVSFDRAEIRDVLKAMGQLAGLNIITDIGVQGRISVYLKDIPFKDAFYALL 363 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 S+ L Q+G I+ V ++ + + L + L+Y ++ + Sbjct: 364 ASSDLGYIQQGEIIIVA------------NLDKLQKIESRDLVTKVYQLKYFESQKAKDI 411 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 K S D N L++ + + +E + +D+P Sbjct: 412 LSKT-SKTAVFDSDDSRNWLIVSAPPSEFAKIESTIKTLDIP 452 Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 74/173 (42%), Gaps = 13/173 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 VT + + VLQ +A + LN +V P VSGTV L + VP + L + + A Sbjct: 574 VTASLKKSDIRDVLQEIASKTDLNFIVDPKVSGTVDLFVNKVPLDEVLTIIQRLANFDME 633 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 + G + E A + + L+Y ++ + G L+ Sbjct: 634 KVGKTYYIRP------------KEVQTATVPQVISTKLYVLKYITLQDILRVGGSLVK-N 680 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 S++ D +T L+ + + L L++ ++++D+ + +S ++T+ + + Sbjct: 681 LSLSYDDKTRLLIAQGKEDDLKVLDELISRIDVEKKEAVVSRELLTVEREGDK 733 Score = 80.3 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 75/173 (43%), Gaps = 13/173 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V+ + + +VL+ L ++ +N V+ V+G + L+L V + L + ++ L Sbjct: 736 VSCDLRGADIREVLRELGKKADINFVIDQKVTGQIDLYLNKVELPEVLNIIQRAGKLSIT 795 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 E + V E+ A + + L+Y ++ + G L+ Sbjct: 796 TEDKVTYVKP------------YEEKVAVPVEVAKTKIYALKYITLSDIERVGGSLVK-N 842 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 S++ D +T L+ + + L L++ ++++D+ + +S ++T+ + + Sbjct: 843 LSLSYDDKTRLLIAQGKEDDLKVLDELISRIDVEKKEAVVSRELLTVEREGDK 895 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 8/155 (5%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT- 82 VTL + +LQ + ++ N++ S DVSG V L L VP +A+ +++S+G I Sbjct: 476 VTLTAKGDDIKDILQEIIQKSGKNIIFSKDVSGGVYLTLNRVPLDRAIDLIIRSSGYIYE 535 Query: 83 -RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK--- 138 R+ G IL + + E + + + +L+ +D ++ + Sbjct: 536 VREGGVILVSAPKIEGAPSPIIEIKELVKIDKIGDVFYVTASLKKSDIRDVLQEIASKTD 595 Query: 139 ---LLSAKGSMTVDKRTNRLLLRDNKTALSALEQW 170 ++ K S TVD N++ L + T + L + Sbjct: 596 LNFIVDPKVSGTVDLFVNKVPLDEVLTIIQRLANF 630 >UniRef50_C1TME7 Type II secretory pathway, component HofQ n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TME7_9BACT Length = 570 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 96/411 (23%), Positives = 179/411 (43%), Gaps = 34/411 (8%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQALQTVVKSA 78 +++++ V + V + LA+ K+N+V+ P V+ +++ + P ++ +++ Sbjct: 162 NRRISVDFRSVDIQDVFRMLADMMKVNIVLDPSVAEIPPLTMRFDEAPLREVFGYLMRLY 221 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 GL + G L + S + + ++ R + Y+D L Sbjct: 222 GLSYAKVGKTLVIGSPEGISKVMGEEK-------------TRVYDVAYSDVKTLPDMLGG 268 Query: 139 LLS-AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 L + K +TVD+R RL ++ ++ LS E+ + +D P QV L A I+ I +++ E Sbjct: 269 LTTIPKEKITVDERLGRLFVKGSENQLSDFERVLQTVDDPGKQVMLRARIIEIKDEASDE 328 Query: 198 LGVK--------WTLADAQHAGGVGQVTTLGSDLSVATATTHVGF---------NIGRIN 240 L W + A G + T G +IG Sbjct: 329 LETMLNAVYKHWWLSTSSSGAEGGYSYVKDPDSYNPPTGEDRPGGIEFPGIEIPDIGTGG 388 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 RLLD L AL + ++A+P ++ Q ASIK + Y + ++G + +E Sbjct: 389 IRLLDTGLKALVTANKGKVLANPSVITVSGQKASIKLVENLKYISARDDAGNPTYSDEEV 448 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQ-NVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 +E TP V + G I ++L I+ V E ++E+ T + V+ GE Sbjct: 449 GPKLEFTPLVGRDGVISVELSIATGEVIAWKEGNQGEEFPQTSEREVVTSIRVRDGEPFV 508 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +GG+F ++ +P+LGDIP G+ F+ K D+R E+V+ + P +++ Sbjct: 509 VGGLFNERHTENTTKIPILGDIPLLGEFFKSKSKTDDRTEVVMVVIPYILN 559 >UniRef50_Q2Y5U9 Type II and III secretion system protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y5U9_NITMU Length = 749 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 84/409 (20%), Positives = 177/409 (43%), Gaps = 23/409 (5%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQAL 71 P ++ A + +TL D + V + LA +N+V DV ++ + + + Sbjct: 173 PILKTAFKKPITLEFRDTGLKSVFEILARTGGINVVFDKDVKQDSKTTIFVRETNIEDVF 232 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 + ++ + L +L+ +S+ N A+Q+ Q L RS + D + Sbjct: 233 KLLLVTNQLAH----KVLNENSVLIYPNTPAKQKEYQE-------LMVRSFFVTNTDVKQ 281 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 + + L+ K M VD++ N +++D A+ E+ V DL +V L ++ I Sbjct: 282 MVAMVKGLIKTK-DMHVDEKLNLFVMKDTPEAIRLAERLVTLNDLADPEVMLEVEVLEIG 340 Query: 192 EKSLRELGVKWT---LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLD--L 246 L LG+++ + A G N+ + G + + L Sbjct: 341 RNKLLNLGLQYPEKINVNYLTAASAAGAAPFPPFQISRAGVNGNGSNLDNLIGFVANPAL 400 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLG 303 ++ +Q ++++A+PR+ + + A + G ++P ++ + A+SV + + L Sbjct: 401 IVNLKQQDGLINVLANPRIRVKNREKAKVLIGDKVPVVTTTAAANVGVASSVSYLDVGLK 460 Query: 304 MEVTPTVLQKGRIRLKLHISQ-NVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 ++V T+ + + +K+ + N+ +V G + + T + +K GET L G Sbjct: 461 LDVESTISLQDEVSMKVSLEVSNIVKEVPVTGGGLAYQVGTRTAATTLALKDGETQVLAG 520 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + ++ VP L ++PW G+LF + + E+ + ITPR+V + Sbjct: 521 LISDDERTTLSKVPGLAELPWIGKLFINKNVVRNKTEIALLITPRIVRN 569 >UniRef50_B1Y7J0 Type II and III secretion system protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y7J0_LEPCP Length = 760 Score = 274 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 89/418 (21%), Positives = 173/418 (41%), Gaps = 47/418 (11%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWK 68 + +P +++ + VTL D P+ VL+ALA +N ++ +V S+ + DV + Sbjct: 170 LAVPVLKSRLQKPVTLEFRDAPLKLVLEALARSAGINFIMDREVRPDLKASIFVRDVRVE 229 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 AL ++ + L E IL+ +++ N + Q L R+ + AD Sbjct: 230 DALDLLIHNHQL----EKKILTDNTVLVYPNTPQKLREHQE-------LVMRTFHIGNAD 278 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 + +L + + +D+R N L LRD + A E+ +A D +V L I+ Sbjct: 279 PKQTLNLLRTMLKVR-DVFIDERVNLLFLRDTPDVIRAAERLIAAQDKADPEVVLELEIL 337 Query: 189 TINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDL-- 246 ++ +R+LG+ T S+ + ++ F IG +N R + + Sbjct: 338 EVSRTKVRDLGI-----------------TYPSEFAGPGSSGAKLFEIGELNRRTIGVDT 380 Query: 247 --ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT----------- 293 +L L +A+PR+ + + A + G +P S+ Sbjct: 381 GYKLKLLRTDGDTKTLANPRVRVRNREKARVHVGDRVPVISSTIVGTTNLGSNNTPVTTE 440 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG-QVLQQADGEVLAIDKQEIETQVEV 352 +++ + + +E PT+ + + +++ + G Q A + + T + + Sbjct: 441 QIQYLDVGIKIEAEPTIYADDSVAISINLDVSSLGNQTRTNAGTTAYEVGTRNASTVLRL 500 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + GET AL G+ + +P LG+ P ++F + RELV+ ITP+LV Sbjct: 501 RDGETQALMGLIRDDDVQTGAGLPYLGEFPVLDRIFGSKRTDRRSRELVLLITPQLVR 558 >UniRef50_C9KL82 Putative type IV pili biogenesis protein PilQ n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL82_9FIRM Length = 430 Score = 274 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 96/422 (22%), Positives = 174/422 (41%), Gaps = 51/422 (12%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 A+ + + V + V VL +LA N+V+ V+GTV+LH T+ P K L+ + S Sbjct: 23 AEAAPIEMQVVEGDVRSVLLSLARTAHENIVLDDSVAGTVTLHATEEPAK-LLRMIAASK 81 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE- 137 GL+ +EG+ V ++ +A+ +++AD +LA A E Sbjct: 82 GLVLIKEGSTYLVTTM----------------PRADALRSVHVYPVRHADPADLAHAAEL 125 Query: 138 KLLSAKG-------------SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELS 184 L S G + VD TN +L + + + V Q+D QV L Sbjct: 126 SLKSVAGDKTADGQETGTARRVLVDSATNSVLFYGTAAEAANVAKVVQQLDRKPRQVSLE 185 Query: 185 AHIVTINEKSLRELGVKWTLAD----------AQHAGGVGQVTTLGSDLSVATATTHVGF 234 A ++ +++ + ++LGV+W + +H G +V T Sbjct: 186 AKVLALSKDASKKLGVEWQWSSLPQYPDFETTYRHKGSANEVQEKEIKRHTQDGTVPGII 245 Query: 235 NIGRINGRL-----LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS-- 287 GR + + AL + + ++A P + + A I G E+P S Sbjct: 246 QFGRGPEGVPFEFYYSATIQALVTQGKAKMLARPNITTVQGREALINIGGEVPVPTQSVT 305 Query: 288 GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIE 347 + T+ +++A + + TP + + GRI +H + P V D + + + Sbjct: 306 NNTTTTTYTYRQAGIILRCTPRIHEDGRITATVHTEVSSPLYVE---DIKAYRFQNRSAD 362 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 T V ++ GET+ +GG+ +P LGD+P G FR + E+++F+T Sbjct: 363 TTVSLRDGETMVIGGLIGSDESRTLSKIPFLGDLPILGSFFRSVRQSRSESEIMIFLTAH 422 Query: 408 LV 409 ++ Sbjct: 423 VI 424 >UniRef50_Q7NA54 Similarities with protein transport protein HofQ of Escherichia coli n=2 Tax=Photorhabdus RepID=Q7NA54_PHOLL Length = 344 Score = 274 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 142/321 (44%), Positives = 195/321 (60%), Gaps = 6/321 (1%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK----LLSAKGSMTVD 149 + + ++ +++ S LQYADA +A + L++ +G + D Sbjct: 25 VPPMIETEEQSVELFDQSVNETEIQSLSTVLQYADAERIAMNLRQNTPALITKEGKVDFD 84 Query: 150 KRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQH 209 TN L+L+D A++ ++ W+ ++D P QV+++AHIVT + ++L ELG+ W + + Sbjct: 85 PETNSLILQDTPIAIAQIKSWLKEIDTPQQQVQITAHIVTSSREALHELGIYWGMPIGEQ 144 Query: 210 AGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASH 269 + L + + FNI RI+ LL++ELSALEQ+ QLDIIASPRL ASH Sbjct: 145 INTSTGINRLNINQAANDNMHRFAFNIARIHTSLLEMELSALEQENQLDIIASPRLTASH 204 Query: 270 LQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQ 329 Q ASIKQGS+IPY S E ++V+FKEAVLGMEVTP +L+K +IRL L ISQN+PG Sbjct: 205 QQLASIKQGSDIPYV--SQEKEKSTVQFKEAVLGMEVTPHILRKNKIRLSLKISQNMPGI 262 Query: 330 VLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFR 389 + Q GE L IDKQEI TQV VK+GETL LGGIF +K VP L DIP G LF Sbjct: 263 SISQGGGENLTIDKQEIITQVTVKNGETLILGGIFQQKKGEQTQKVPYLSDIPLLGSLFN 322 Query: 390 HDGKEDERRELVVFITPRLVS 410 + RRELV+FITP+L+ Sbjct: 323 QKAHKHSRRELVIFITPQLMD 343 >UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gammaproteobacteria RepID=GSPD_AERHY Length = 678 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 90/362 (24%), Positives = 149/362 (41%), Gaps = 41/362 (11%) Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA-------- 142 V S + Q Q R L+Y A ++ + + + S+ Sbjct: 241 VVSGEPKARARIIQMVRQLDRDLQSQGNTRVFYLKYGKAKDMVEVLKGVSSSIEADKKGG 300 Query: 143 ---------------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 K +++ D+ TN L++ ++ LEQ VA++D+ QV + A I Sbjct: 301 GTATTAGGGASIGGGKLAISADETTNALVITAQPDVMAELEQVVAKLDIRRAQVLVEAII 360 Query: 188 VTINEKSLRELGVKWTLADA------QHAGGVGQVTTLGSDLSVATATTHVGFNIGRING 241 V I + LGV+W + G+G V D TT + NG Sbjct: 361 VEIADGDGLNLGVQWANTNGGGTQFTNAGPGIGSVAIAAKDYKDNGTTTGLAKLAENFNG 420 Query: 242 -------RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV-----SSGE 289 + ++AL + DI+++P ++ + AS G E+P Q +SG+ Sbjct: 421 MAAGFYQGNWAMLVTALSTNTKSDILSTPSIVTMDNKEASFNVGQEVPVQTGTQNSTSGD 480 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 + +++E K + VTP + + + L + + G+ DG D + ++ Sbjct: 481 TTFSTIERKTVGTKLVVTPQINEGDSVLLTIEQEVSSVGKQATGTDGLGPTFDTRTVKNA 540 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V VKSGET+ LGG+ + K VPLLGDIP G LFR +R L+VFI P ++ Sbjct: 541 VLVKSGETVVLGGLMDEQTKEEVSKVPLLGDIPVLGYLFRSTSNNTSKRNLMVFIRPTIL 600 Query: 410 SS 411 Sbjct: 601 RD 602 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH 61 K W A + + +A + + + + + + + + +++ P V G +++ Sbjct: 6 KGWRLATVAAALMMAGSAWATEYSASFKNADIEEFINTVGKNLSKTIIIEPSVRGKINVR 65 Query: 62 ----LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPL 117 L + + Q +V+ G N + + A ++ + Sbjct: 66 SYDLLNEEQYYQFFLSVLDVYGFAVVPMDNGVLKVVRSKDAKTSAIPVVDETNPGIGDEM 125 Query: 118 ENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 R + ++ ELA +L + G++ +N LL+ ++ L + V ++D Sbjct: 126 VTRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYDPSNVLLITGRAAVVNRLVEVVRRVD 185 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL 219 Q I+ + S E+ V+ + G T+L Sbjct: 186 KAGDQ---EVDIIKLKYASAGEM-VRLVTNLNKDGNSQGGNTSL 225 >UniRef50_C6E2R8 Type II and III secretion system protein n=7 Tax=Geobacter RepID=C6E2R8_GEOSM Length = 870 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 81/424 (19%), Positives = 172/424 (40%), Gaps = 41/424 (9%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG-TVSLHLTDVPWKQALQTV 74 + + +TL D + ++ L++ +N V V V+LHL + ++QA++ + Sbjct: 176 LNLKSNKPITLKFRDAKLKEIFTILSQLSGINFVFDEAVKDVNVTLHLENGSFQQAMELI 235 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 L + IL+ +I + + L ++ L DA + Sbjct: 236 TGMHKL----DKKILNESTIIIYPKTPDK-------VKQYEELFLQTFYLNKLDAKKAVN 284 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +L K + V++ N L+LRD + + + D+P +V L + +++++ Sbjct: 285 LVRTMLQVK-KIYVNEEANALVLRDKPEVIEVARKILEANDVPDAEVLLEVEVFELSKQN 343 Query: 195 LRELGVKWT-LADAQHAGGVGQVTTLGSDLSVATATTHVG-------------------F 234 G+ + A + G G + L+ F Sbjct: 344 AETFGLLLSRYATSMGVTGPGSTSGGSPFLADTLGAVTTTTTGTGTATTSAQPSNLLNVF 403 Query: 235 NIGRINGRLL--DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG- 291 N+ NG L + + + + +++P++ + + A G+ +P +S SG Sbjct: 404 NLRGYNGYLTVPNATFNFGKTLSNGETLSNPKIRVKNREKAKFNVGTRVPITTTSSPSGG 463 Query: 292 --ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVP---GQVLQQADGEVLAIDKQEI 346 + +V++ + + + PT+ + +KL + + + V+ I + + Sbjct: 464 GVSVNVQYVDVGVKVNAEPTIQLNNEVAIKLGLEVSSILNEKTIGTDQATTVVTIGTRNL 523 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 +T + +K GET +GG+ + ++ V LLGDIP G LF + + ++ EL++ ITP Sbjct: 524 DTVLSLKDGETSIIGGLIQKTQTDSKNKVFLLGDIPIIGPLFSNTSDKKDKTELLLAITP 583 Query: 407 RLVS 410 R+V Sbjct: 584 RIVR 587 >UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AIN8_CITK8 Length = 640 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 80/343 (23%), Positives = 147/343 (42%), Gaps = 22/343 (6%) Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK----AGEKLLSAKGS- 145 V S + + R Q + N R L+YA+A ++ GE++ G+ Sbjct: 237 VISGSEEARARTRTLIAQLDREQNNEGNTRVFYLKYANAAKVVPVLTGIGEQMKDKPGAA 296 Query: 146 ------------MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 +T D+ TN L++ +++LE+ + ++D+ QV + A I + + Sbjct: 297 KSKSPVAATDLNITADESTNSLVITAQPNVMNSLEKVIDKLDIRRPQVLVEAIIAEVQDG 356 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQ 253 + +LGV+WT G + G G NG ++AL Sbjct: 357 AGTDLGVQWTSKHGGVQFGATGLPIGQVKNGTIKGVNFTGMATGFFNGD-FGALMTALST 415 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPT 309 + DI+++P ++ + AS G ++P Q ++G++ +VE K +++ P Sbjct: 416 NGKNDILSTPSVVTLDNKEASFNVGQDVPVLSGSQTTTGDNVFNTVERKTVGTKLKILPQ 475 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 + I +K+ + + + + I +V V SG+T+ LGG+ K Sbjct: 476 INDGDMIHMKIEQEVSSVDASSTEDSSLGPTFNTRTINNEVMVHSGQTVVLGGLIENVTK 535 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 VPLLGDIP GQLFR+ ++ +R L+VFI ++ + Sbjct: 536 QNVSKVPLLGDIPLVGQLFRYTSQDTTKRNLMVFIHTTVLRDD 578 Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 8/188 (4%) Query: 1 MKQ--WIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV 58 MK+ W L L + + + + + + + ++V P V GTV Sbjct: 1 MKKFPWACVALTTLALYSSSLFAANFSASFKNTDIREFIDTVGRNLNKTILVDPSVQGTV 60 Query: 59 SLHLTDVPWK----QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQAN 114 S+ +V + Q +V+ GL N + + A+ Sbjct: 61 SVRTYNVLTEDEYYQFFLSVLDLYGLSVIPMDNGMVKVVRSSVARTAGTPIADSKNPGKG 120 Query: 115 LPLENRSITLQYADAGELAKAGEKLLSAK--GSMTVDKRTNRLLLRDNKTALSALEQWVA 172 + R + ++ ELA +L A G++ + +N LLL + ++ L V Sbjct: 121 DEIITRVVRMENVPVRELAPLLRQLNDATGIGNVVHFEPSNVLLLTGKASVVNRLVDLVQ 180 Query: 173 QMDLPVGQ 180 ++D Q Sbjct: 181 RVDRSGVQ 188 Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 89/258 (34%), Gaps = 40/258 (15%) Query: 28 VDDVPVAQVLQALAEQEKLNLVVS------PDVSGTVSLHLTDVPWKQA---LQTVVKSA 78 +D+ V V ++A + S ++ V + + +VP ++ L+ + + Sbjct: 91 MDNGMVKVVRSSVARTAGTPIADSKNPGKGDEIITRV-VRMENVPVRELAPLLRQLNDAT 149 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 G+ +V + + + + R R + + L YA A EL+ Sbjct: 150 GIGNVVHFEPSNVLLLTGKASVVNRLVDLVQRVDRSGVQRREIVPLHYASAKELSDMLNN 209 Query: 139 LLSAK----------GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 L + + + D+ TN L++ ++ A + +AQ+D Sbjct: 210 LNNEEQKGQNAPQLATKVVADEETNSLVISGSEEARARTRTLIAQLDREQN--------- 260 Query: 189 TINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL 248 NE + R +K+ A G + A + + V DL + Sbjct: 261 --NEGNTRVFYLKYANAAKVVPVLTGIGEQMKDKPGAAKSKSPVAAT---------DLNI 309 Query: 249 SALEQKQQLDIIASPRLL 266 +A E L I A P ++ Sbjct: 310 TADESTNSLVITAQPNVM 327 >UniRef50_B1Y7C9 Type II and III secretion system protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y7C9_LEPCP Length = 662 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 90/409 (22%), Positives = 185/409 (45%), Gaps = 35/409 (8%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV--SLHLTDVPWKQALQ 72 G++AA + VTL D V V +AL+ +N+++ DV + ++++ + + L Sbjct: 181 GLEAAFKRPVTLQFRDANVKMVFEALSRTANINIILDRDVRADLRTTIYVQNASVEDTLD 240 Query: 73 TVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 ++ L R GN + V+ A A+ + L+ R+ L +A + Sbjct: 241 LILLQNQLDRRVLNGNTIFVYP------------ATPAKQREYNELKVRTFQLSNIEAAQ 288 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +A + +L + + D ++N L++RD +++ E+ +A D+P +V L ++ ++ Sbjct: 289 MATIIKTMLKTR-DVVTDAKSNSLVMRDTAASIAVAEKLIAANDVPDPEVVLEVQVLEVS 347 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 L +G+++ T+G+ + T + L L L+ L Sbjct: 348 SDRLSNIGLRFP-----------DAFTVGTPSTATTVGDLRALTSDNLTASSLSLGLNLL 396 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV------SSGESGATS--VEFKEAVLG 303 Q +I+ASPR+ A + + A I G ++P SG+S + +++ + + Sbjct: 397 LQDTDTNILASPRIRARNKEKARILVGDKVPVITNLITPQQSGQSSVITGSIQYVDVGIK 456 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 +EV P V G + +K+++ + + + + G I + T + + GET + G+ Sbjct: 457 LEVEPQVYADGDVGIKVNLEVSNIAKTITTSSGVAYQIGTRNATTALRLHDGETQMMAGL 516 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 +++S +P LG +P G+LF + E+V+ ITPR+V + Sbjct: 517 INDQDRSTASKLPGLGQLPVIGRLFTSTNASGGKSEIVLSITPRIVRPQ 565 >UniRef50_B1FCE7 Type II and III secretion system protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FCE7_9BURK Length = 783 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 90/412 (21%), Positives = 173/412 (41%), Gaps = 30/412 (7%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV--SLHLTDVPWK 68 M++P + + + VTL + DV + VL L + ++ V+ D+S + +++ D Sbjct: 185 MVLPALNQSLQKPVTLELKDVDIRSVLSILTQTSGVSFVLDKDISPDLRATVYARDTSVI 244 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 AL +++++ L E +L+ ++ + +++ L RS L AD Sbjct: 245 DALNLILQTSQL----ERKVLNDTTMLIYPSTEEKKKRYD-------DLVVRSYYLNSAD 293 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 ++ +++ K SM VD R L++RD +T + + + D+ +V L ++ Sbjct: 294 PQKVQDMLRTIVAPK-SMYVDGRLKMLVVRDTETVQDTIVRLLNLYDIASPEVILDVEVL 352 Query: 189 TINEKSLRELGVKWT---LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLD 245 +N L LG+++ A GV T+G + + + F Sbjct: 353 EVNSSDLLNLGIQFPDSVSARMVGPAGVAGSMTIGDLKHLNRDSFPLSF-------PDPL 405 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT----SVEFKEAV 301 L+ + +A+PR+ + + AS+ G ++P S+ + SV + + Sbjct: 406 AVLNLRQTSGSTRTLANPRIRVVNHEKASVLIGDKVPVITSTVNQTSNAITESVNYLDVG 465 Query: 302 LGMEVTPTVLQKGRIRLKL--HISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 L +EV P + + +K+ +S V I + T + + GET A Sbjct: 466 LKLEVEPEIHVDNDVTMKVALEVSNIVKEVRSSATGLLAYQIGTRNANTVLRLHEGETQA 525 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 L G+ + VP LG IP G+LF ++ R E+V+ ITP + S Sbjct: 526 LAGLIKNDTQESGTHVPGLGRIPVLGRLFSNNRDTATRSEIVLLITPHIARS 577 >UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0C8_9DELT Length = 690 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 86/333 (25%), Positives = 143/333 (42%), Gaps = 42/333 (12%) Query: 119 NRSITLQYADAGELAKAGEKLLSAKGS-------------MTVDKRTNRLLLRDNKTALS 165 + + L++A A +L + GS + D TN L++ L Sbjct: 285 TQVVFLRHAKAEDLVPILTGMGKYDGSREERRGQQRQDVDIQADANTNALIMTGPPAVLQ 344 Query: 166 ALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLS- 224 L+ + Q+D+ Q+ + A I I+ +LG++W ADA G G+ +S Sbjct: 345 NLQTVIRQLDIRRAQLMIEAVIAEISTARAVDLGIQWFSADADKVIGGTNFPGSGASMSG 404 Query: 225 --------VATATTHVGFNIGRINGRL---------LDLELSALEQKQQLDIIASPRLLA 267 +A GFN+G +G ++AL + +I+++P L+ Sbjct: 405 IAAGDEGSIAALAGLGGFNMGVFSGSTEILGREFFSFGALVNALARDGDTNILSTPSLVT 464 Query: 268 SHLQPASIKQGSEIPYQVSSGESGAT--------SVEFKEAVLGMEVTPTVLQKGRIRLK 319 Q A I G +P+ S GAT +VE ++ + + V P V + IRL+ Sbjct: 465 MDNQEAEIIVGQNVPFLTGSFTEGATGVGGSPFQTVERRDVGIKLRVKPQVTEGDVIRLQ 524 Query: 320 LHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLG 379 + + + A L + + I T V V+ G+ L LGG+ + + VPLLG Sbjct: 525 IEQEVSSVERDDLAAG---LVTNTRNINTSVLVEDGKVLVLGGLISDDVQETVSKVPLLG 581 Query: 380 DIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 DIP FG LFRH E +R L+VF+ P ++ + Sbjct: 582 DIPLFGALFRHTRSERSKRNLMVFLRPVILRDQ 614 Score = 81.4 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 71/190 (37%), Gaps = 13/190 (6%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ-----AL 71 + + + +TL + + V+ ++A +V P V G +++ ++ P + Sbjct: 40 RPGQAETITLNFKEADIESVINSVARITGKTFIVDPAVRGNITI-VSSQPMRADEVYGVF 98 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIA-RQEAEQARAQANLPLENRSITLQYADAG 130 ++++ + GN++ + A ++ +AE + R LQY A Sbjct: 99 LSILQVHDYAAVEAGNVVKIIPAAKAGQDLVITADAEHPLELEEDRIVTRIYRLQYLQAD 158 Query: 131 ELAKAGEKLLSAKG---SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 L +L + S K N L+ + + L + V ++D G I Sbjct: 159 RLVPILRPMLGTRTGQMSALAVKEGNALIFTERAGTVERLLRIVRRLDQSSGG---EMEI 215 Query: 188 VTINEKSLRE 197 VT+ R+ Sbjct: 216 VTLEHADARD 225 >UniRef50_D1Y3M3 Putative type IV pilus biogenesis protein PilQ n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3M3_9BACT Length = 566 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 83/417 (19%), Positives = 177/417 (42%), Gaps = 39/417 (9%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDV--SGTVSLHLTDVPWKQALQTVVKS 77 +K+++ + D +A V + L +N+VV V + ++L ++ P+++ Q V++S Sbjct: 155 SSRKISMNLKDCDLADVFRLLGAMADVNIVVDASVPQNARMTLAFSEAPFEEVFQFVLRS 214 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 L G + V + R L +S + YA+A + A + Sbjct: 215 QNLGFSVVGRTVVVGAKNSLGLLTGR-------------LTTKSYHVAYAEAQKTAPLLK 261 Query: 138 KLL---SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +L S + VD+R N +++ + + + +D P QV L A I+ +N+ + Sbjct: 262 ELAELHSPANRVLVDERQNLIVVTGTAFQQEKVRRTLRLLDAPGRQVMLKARIIEVNDDA 321 Query: 195 LRELGV------KWTLADAQHAG--------------GVGQVTTLGSDLSVATATTHVGF 234 +L W Q+ G + L + ++ Sbjct: 322 SDQLETALNAVYDWWWGSYQNGALSAGFAQSGRKPGTAEGALGNLDTSANLPGEIGSGIV 381 Query: 235 NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 + R+LD L L ++++ ++A P + + A++K ++ Y ++ + Sbjct: 382 QLAGTATRMLDFRLRTLVEQKKARVLADPTVTVLDGEKATVKLVEKLKYVSRRDDAQNPT 441 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE-VLAIDKQEIETQVEVK 353 + +E +EVTP + + G I + + ++ Q ++ GE + + + +ET++ V+ Sbjct: 442 YDDEEVGPKLEVTPRIGRSGMITVSVSLATGEVIQWIRGGQGEQIPQTNSRTVETKIRVR 501 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 GE +GG+F + SVP+L IP G+LF+ + R ++V+ + P ++ Sbjct: 502 DGEPFVIGGLFKESRSRTRASVPILSSIPLIGELFKAKLDKKTRSQVVMILIPYILE 558 >UniRef50_B5SC46 General secretion pathway gspd-related protein n=4 Tax=Ralstonia solanacearum RepID=B5SC46_RALSO Length = 761 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 86/399 (21%), Positives = 171/399 (42%), Gaps = 25/399 (6%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV--SLHLTDVPWKQALQTVVK 76 A Q + L D V + +A+A +N ++ DV + ++ + + AL ++ Sbjct: 180 AAKQPINLDFRDASVRMIFEAMARSTGINFILDKDVRPDLKTTVFIRQAKLEDALDLILS 239 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + L +++ +I N +Q Q L R+ L A+A + Sbjct: 240 TTQL----NKKMMNGSTILIYPNTPEKQRDYQ-------DLVVRAFYLTNAEAKQTGAML 288 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 + +L + +D+R N +++R++ + E+ V D +V L ++ ++ L Sbjct: 289 KTMLKIREPY-IDERANMVVIRESPDVVRLAERLVELQDRNDSEVVLEVEVLEVSSTKLT 347 Query: 197 ELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQ 256 +LG+++ + T+L T + G N RI L+ + Sbjct: 348 QLGIQYPNSFTLTPLSATGATSL-------TLSDFKGLNSDRIGVSTPSAVLNLRRELGD 400 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGMEVTPTVLQK 313 D++A+P++ A + + A I G ++P ++ S + SV++ + L +EV P++ Sbjct: 401 TDLLANPKIRAKNHEKAKILIGDKLPVITTTSTSTGFVSESVQYIDVGLKLEVEPSISPD 460 Query: 314 GRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQ 372 + +K+++ + + G V I + T +++ GET L G+ + S Sbjct: 461 DEVSMKINLEVSSLTNQITTRSGTVAYQIGTRSANTVLKLHDGETQLLAGLIKTQQTSSA 520 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +P LGDIP G+LF R E+V+ ITPR+V Sbjct: 521 ARIPGLGDIPLLGRLFSSQTDNGVRNEIVLSITPRVVKP 559 >UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVJ8_SYNAS Length = 601 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 28/347 (8%) Query: 89 LSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTV 148 + + N + + L I LQ + ++ G+ LS + Sbjct: 225 IITALDSELEKNAIVMHVYPLQNASAEDLAKVLINLQPKETAPGSEKGQPALSRNVQIQS 284 Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 DK TN L++ + + L+ + ++D V + A I+ +N LG +W Sbjct: 285 DKATNSLIITASAEDYALLQGLIQKLDSSRPMVYIEALILEVNIVKDFNLGTEWRAMHDA 344 Query: 209 HAGGVGQVTTLGSDLSVATATTHV---------------------GFNIGRINGRLLDLE 247 +GG G + L T ++ G +G I + + Sbjct: 345 GSGGTGSLLFGSGGLGPPAGTYNILPDVTTPATYSSGFTFGILGTGITLGGITFQDIGAM 404 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLG 303 + A++ + I++ P+LL + A I G +PY + ++ +S E+++ + Sbjct: 405 IQAIKSDTDIHILSKPQLLTMDNEEAQIHVGKNVPYATRKETTTTNLDYSSYEYRDVGVS 464 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 +++TP + +G +R+K++ + QV + + + +K+ + T V +K ET+ +GG+ Sbjct: 465 LKITPHINSEGFVRMKINQEVS---QVTEDSPTGLPTTNKRAVNTTVTIKDSETVVIGGM 521 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + G VPLLGDIP G LF+ E+ L VFITPR++ Sbjct: 522 IGDSTQLGTYKVPLLGDIPVLGWLFKSRSSNREKTNLYVFITPRVIR 568 Score = 88.0 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 64/156 (41%), Gaps = 4/156 (2%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHL-TDVPWKQA---LQTVVKSAG 79 VT+ D+V + ++A+ E N ++ V G+V++ + +A Q+V++ G Sbjct: 75 VTIDFDNVEIQTFIKAIGEMTGRNFLIDKQVQGSVTVFSPKQISSDEAYRVFQSVLEIHG 134 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 T G ++ + + L R + L++ + +L K + L Sbjct: 135 YTTVPSGAVIKILPRKDAREKDIPTFLQDEEGGREDQLITRIVKLKHGNPEDLKKVIDPL 194 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 ++ + + L++ D ++ + L + + +D Sbjct: 195 VTRDSIVHAYPPSGMLVITDVESNVQRLLKIITALD 230 >UniRef50_D1B5I4 Type II and III secretion system protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5I4_THEAS Length = 589 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 90/404 (22%), Positives = 176/404 (43%), Gaps = 29/404 (7%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT-VSLHLTDVPWKQALQTVVKSAGLI 81 V L + +V + V + L + N++ P V + V+L + VP K+ ++++ + Sbjct: 184 PVDLALREVELKDVFRMLGDFSGYNIICDPTVPTSPVTLTVRKVPMKEVFSYLMRTYDIT 243 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 G + V ++ +++ ++ + Y D +++ + L Sbjct: 244 YAVMGRTILVGKADSLAKSLGQEK-------------TKAFEISYGDVKQISAQVQTLFE 290 Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG-- 199 + VD+R + + L+A+E+++ D P QV L A IV + + +REL Sbjct: 291 ITRPIAVDERLRVMYVTGRPEQLAAVERFLNAADHPGKQVMLQARIVEVKDDGVRELESV 350 Query: 200 VK-----WTLADAQHAGGVG-----QVTTLGSDLSVATATTHVGFNIGRING--RLLDLE 247 V W L+ + G +G Q + +D + T + +G LLD Sbjct: 351 VNTVYRYWWLSFSSKGGVLGYSRINQESVYKNDTNRVTKPGATDISAIAESGGLSLLDAG 410 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 + ALE + +ASP ++ + A I I Y + ++G + ++ ME Sbjct: 411 IKALENADKGKTLASPSVVVVDGKEAKISLTENIKYISARDQAGNPTYSEEKVGPTMEFL 470 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGE-VLAIDKQEIETQVEVKSGETLALGGIFTR 366 PTV + G + +K+ + + ++ GE V +E+ + V V+ GE +GG+F Sbjct: 471 PTVGRDGFVTIKMTLKTGEVTKYIKGGLGEEVPQTSTREVTSYVRVRDGEPFVVGGLFRD 530 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 N + +P+L DIP G+LF+ K+ ER E+ + + P ++ Sbjct: 531 SNTFSEYRIPVLSDIPLIGELFKSRTKKKERGEVAMIVIPHILD 574 >UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseudomonas RepID=B1J7E4_PSEPW Length = 745 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 14/296 (4%) Query: 127 ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 A + E A K L +T K +N+LL+R +E + ++D P QV++ Sbjct: 427 ASSAESADGSVKSLEESVRITAQKSSNQLLVRTRPAQWKEIESAIKRLDSPPLQVQIETR 486 Query: 187 IVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN------ 240 I+ + +LGV+W L G TT+ ++ A G +G + Sbjct: 487 ILEVKLTGDLDLGVQWYLG---RLAGNSSSTTVANESGSQGALGAGGVALGSASMFYSFV 543 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY-----QVSSGESGATSV 295 L + L ALE + ++++P L+ + Q A I+ G IP S ++ +SV Sbjct: 544 SSNLQVALRALETRGLTQVLSAPSLVVLNNQQAQIQVGDNIPISQTTVNTSDSDTTLSSV 603 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 E+ + + ++V P + G + + + + I + + TQV V+SG Sbjct: 604 EYVQTGVILDVVPRINPGGLVYMDIQQQVSDADDSAVTTTQPNPRISSRAVSTQVAVQSG 663 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +T+ LGG+ + N VP L IP G LF K +R EL+V ITPR+V++ Sbjct: 664 QTVLLGGLIKQDNGQSDTRVPGLSSIPGLGWLFGSTSKSRDRTELIVLITPRVVNN 719 Score = 61.4 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 7/168 (4%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQAL 71 P + + D P+ V+ + + N +S V G+VS + V +QAL Sbjct: 95 PPAAKDEQGDIVFNFTDQPIEAVINSVMGDLLHENYSISQGVKGSVSFSTSKPVTKQQAL 154 Query: 72 ---QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 +T++ ++G + + + AQ L R L+Y Sbjct: 155 SILETLLSWTDNAMIRQGERYVILPAD--KAVAGKLVPQVPVAQPATGLAARLYPLRYIG 212 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 A E+ K + + + VD N + L L+ + + D+ Sbjct: 213 ASEMQKLLKPFVRENAFLLVDPARNVISLAGTPDELANYQDTIDTFDV 260 >UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUV6_SYNAS Length = 717 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 18/290 (6%) Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 + G+ +A M+ D R N +++ L + +D+P QV + A IV + Sbjct: 416 SDRGDAFDAAGLRMSADDRKNMIIILSKPDVYRNLLNLLQALDVPARQVLIEATIVELTL 475 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALE 252 + GV+W + ++ G TLG+ + + + G+ + +SAL Sbjct: 476 TDELKYGVEWFIRNSW----DGDSYTLGTLGKLGLEPLGLTYAFLSRTGQ-FEALISALA 530 Query: 253 QKQQLDIIASPRLLASHLQPASIKQGSEIP-----------YQVSSGESGATSVEFKEAV 301 +K + +I+++PRL+ A+I+ G ++P + S + S++++ Sbjct: 531 EKSKANILSTPRLMVLDNMEATIQVGKDVPTVTGQISTLDSVNTTDSTSVSQSIQYRSTG 590 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 + ++V PT+ +G + L I+Q V G+ I + I T + G+T+ LG Sbjct: 591 VMLKVKPTINTEG--LMTLEITQEVSDIAETPGVGDSPIILTRRINTSIIAAHGQTIVLG 648 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G+ G+ VPLLGDIP G LF+ K ++ EL+V +TP +++ Sbjct: 649 GLMQENQSLGESKVPLLGDIPILGNLFKATSKTKDKTELLVLVTPTILTD 698 >UniRef50_A1WZA7 Type II and III secretion system protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZA7_HALHL Length = 372 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 167/306 (54%), Gaps = 19/306 (6%) Query: 120 RSITLQYADAGELAKAGEK---LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 R++ L +A+A +LA+ +LS G +VD+RTN L+L+D L EQ V ++D Sbjct: 44 RTLPLVHAEAAQLAELLRDETGVLSESGHASVDERTNTLILQDTPARLEEAEQLVRELDR 103 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD-----------LSV 225 QV + A IV + + RELG + L+ + G + GS+ L Sbjct: 104 ANRQVMIEARIVLASGEYSRELGSRLGLSSERGDGHFAFDSLPGSNDAAVGDGLLAELPP 163 Query: 226 ATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 + ++G + RLL LELSA+E + +++SPR+L + Q A I+QG +IPYQ Sbjct: 164 VGEGARLSVSVGEVGERLLQLELSAMEAEGHGRVVSSPRVLTTERQAARIEQGVQIPYQ- 222 Query: 286 SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQE 345 + ESGAT+V F++A L + TP V + + L L ++++ GQ+ + V +ID Q Sbjct: 223 ETAESGATAVAFQDAALSLTATPQVTEDDAVSLALRVTKDAVGQIYEG----VPSIDTQA 278 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 + T + V++GET+ LGG+ + + + VP LG++P G LFR E EL+VF+T Sbjct: 279 VTTHLRVQAGETIVLGGVREHEQRKQRQRVPWLGELPLIGWLFRQRMSEQSHHELLVFVT 338 Query: 406 PRLVSS 411 PRLV Sbjct: 339 PRLVED 344 >UniRef50_Q3SJB4 Type II secretion system protein D n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJB4_THIDA Length = 667 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 79/409 (19%), Positives = 177/409 (43%), Gaps = 30/409 (7%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV--SLHLTDVPWKQA 70 +PG+++ + +TL + + + + ++ +N + DV + S+ + + + A Sbjct: 172 LPGLRSLFEKPITLEFRNADLKAIFEVISRSAGINFIFDKDVRQDLVASIFVRNTRIESA 231 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 + ++ S L +L+ +++ N A+ Q L ++ L DA Sbjct: 232 IDFLLMSNQLAK----KVLNENTVLVYPNIPAKTRDYQ-------DLRAKTFYLASMDAK 280 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 + + ++ + + +D++ N L++RD A+ E+ + DL +V L ++ + Sbjct: 281 QALNIVKTIVKTR-DVVIDEKLNTLVMRDTPDAIRLAEKLLGSQDLAESEVLLEVEVLEV 339 Query: 191 NEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHV-GFNIGRINGRLLDLELS 249 + L ++G+ TLG + +T + G N G I L + Sbjct: 340 SRSRLSDIGI--------TPPTEATFRTLGPSGAPSTTLADLKGLNSGLIGVSSLSASVR 391 Query: 250 ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT------SVEFKEAVLG 303 A +++A+PR+ + + A + G +P ++ S T +V + + + Sbjct: 392 ARMDNGDTNLLANPRIRVKNREKAKVHIGERVPIITTTVTSAGTTSFLPETVNYLDVGIK 451 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQ-VLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 EV P + + +K+ + + GQ + ++ EV + + T + ++ GET AL G Sbjct: 452 FEVEPLISLNDEVTIKVALEVSSLGQKSVTKSGSEVYRVGTRNASTTLALRDGETQALAG 511 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + + + + +P G IP G+LF ++ E+V+ ITP +V + Sbjct: 512 LISDEERETVNGIPGFGRIPAIGRLFASKSNSTDKTEIVLLITPHIVRN 560 >UniRef50_B6BQP5 Type II Secretion PilQ n=2 Tax=root RepID=B6BQP5_9RICK Length = 516 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 105/438 (23%), Positives = 209/438 (47%), Gaps = 46/438 (10%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 +LIP + Q+VTL ++ + ++ + + ++N++V +V+G +S L DVPW +A Sbjct: 87 LLIPDEYKSLKQRVTLKFKNLDYKETMKLMGKIGEINVLVGDEVAGAISAELVDVPWDKA 146 Query: 71 LQTVVKSAGL--ITRQEGNILSVHSI-------AWQNNNIARQEAEQARAQANLPLENRS 121 Q ++ N++ VHS +++ + + + P+ + Sbjct: 147 FQALLDMKNYASDIDVNSNLIRVHSPETLTSQETYKSERAQAVKNKVELEDSVEPIISEI 206 Query: 122 ITLQYADAGELAKAGEKLLSAKG-------SMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 L Y E+L + G +T + T +++R + L +++ + ++ Sbjct: 207 FRLYYISPALAKSTIEELFKSTGENAYSPIKITEETATRSIIVRGKERDLDTVDKVLNEI 266 Query: 175 DLPVGQVELSAHIVTINEKSLRELGVKWTL----ADAQHAGGVGQVTTLG---------- 220 D+ QV + A +V + ++LG + D Q G VG ++ G Sbjct: 267 DIKTEQVLIEAFVVKATSEFEKQLGTRLGGYYKRNDEQIGGIVGSTSSAGTLDDTSAALA 326 Query: 221 -------SDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPA 273 ++ + AT+ +G + + +L E++ALE+ ++ I++P++ + QPA Sbjct: 327 QVAKDQITNFAATGATSGIGI-LKKTGSAVLKAEITALEKMGMVETISNPKVFTINNQPA 385 Query: 274 SIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQ 333 S+ QG EIPY+ +S + +TS FKEA L ++VTP+++ G + L + ++ + + Sbjct: 386 SVTQGKEIPYETTSEGTTSTS--FKEAALKLQVTPSIIGDGNVLLDIQVNNDDADTSQDE 443 Query: 334 ADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP-LLGDIPWFGQLFRHDG 392 I K EI T++ V G+ + +GGI + ++ VP LG++P G L ++ Sbjct: 444 -----PPITKMEIITKLLVADGDIVVIGGIKSNNISKAKEQVPGGLGNVPVIGNLLKYKK 498 Query: 393 KEDERRELVVFITPRLVS 410 KED+ EL++FI PR++ Sbjct: 499 KEDKLEELLIFIAPRVLD 516 >UniRef50_B9XBV8 Type II and III secretion system protein n=1 Tax=bacterium Ellin514 RepID=B9XBV8_9BACT Length = 612 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 103/440 (23%), Positives = 179/440 (40%), Gaps = 66/440 (15%) Query: 26 LMVDDVPVAQVLQALAEQEKLNLVVSPDV-------------SGTVSLHLTDVPWKQALQ 72 +++D+VP+ ++ LA Q LN ++ P + VSL ++ QAL Sbjct: 134 IVMDEVPLTDAIKNLARQAGLNYMLDPKINYGVAGPDGKLNPQPMVSLRWENLTADQALN 193 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 V+ + L + IAR + A PL R I L+YA+ + Sbjct: 194 AVLGNYNLTI-----------VDDPRTKIARITVKDPAAPE--PLVTRVIQLKYANVTNI 240 Query: 133 AKAGEKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +L + + D RT++L++ L+A+++ VA++D QV + A +V + Sbjct: 241 VLNVTGVLQDKRSRVAADVRTSQLVVLATDRELTAVDELVAKLDTATKQVLIEARLVETS 300 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT------------------------ 227 + GV WT A G + L + + T Sbjct: 301 KNPTTAKGVDWTGTAAAQNVRFGNNSILAAPFTRGTPPTPANPFGTPDQQAVPSTILDPT 360 Query: 228 -----ATTHVGF--NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSE 280 A TH GF N +N LS L ++++PR + + A++ Sbjct: 361 QPMIAANTHNGFLPNTFFLNADGASAVLSFLNTDNDAQVLSTPRAVTLDNETATLSVTRA 420 Query: 281 IPYQVSS----GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG----QVLQ 332 P ++ G G + V + ++VTP + I L++ + +++ Sbjct: 421 QPIFKTTAGTQGSPGGSEVTYTNVGTILKVTPRISANKMISLRVIPEVSSVAGTDRKIVS 480 Query: 333 QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 E D + I+TQV + SG TL +GG+ + VPLLGDIP+ G FRH+ Sbjct: 481 GQINEADIFDVRHIDTQVLIPSGNTLVMGGLVSDDRTKSYIKVPLLGDIPYLGAAFRHES 540 Query: 393 KEDERRELVVFITPRLVSSE 412 K ++ L++F+TP +V +E Sbjct: 541 KTQNKKNLIIFVTPTIVETE 560 >UniRef50_A3ZUT9 Type IV pilin multimeric outer membrane protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUT9_9PLAN Length = 719 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 102/412 (24%), Positives = 185/412 (44%), Gaps = 40/412 (9%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 +T+++ D + +VL+ L+EQ LN++ + V GTVS L+ V + AL +++S G IT Sbjct: 175 LTIVIQDTDIREVLEMLSEQGNLNILPTNSVRGTVSASLSKVDVQTALNAILRSTGYITL 234 Query: 84 QEGNILSVHSIAWQN--NNIARQEAEQARAQANLPLENRSITLQYADAGEL--------- 132 +E N + V + A + NN+A + ++ R Y A +L Sbjct: 235 EENNFIYVGTPAELHAMNNMADR------------VQTRIYRPNYVRAVDLQTLLTPLLT 282 Query: 133 AKAGEKLLSAKGSMTVDKRTNR-----------LLLRDNKTALSALEQWVAQMDLPVGQV 181 A+ G +S+ + + +N +++RD + L+ +++ V ++D QV Sbjct: 283 AEVGVISVSSASQVGISADSNAAGGDDFAGTEAVIVRDFEHKLNEIDEAVRELDRRPLQV 342 Query: 182 ELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRING 241 + A I+++ LGV + ++ + V+ T G G ++ Sbjct: 343 AIEATILSVKLDDSLNLGVNFEALIDKNKVRL--VSGFPLSALDQIKLTDGGLKFGFLDS 400 Query: 242 RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS--VEFKE 299 L + + ALE +IASP+LL + Q A I G + Y ++ A++ VEF E Sbjct: 401 S-LGVFIDALESFGDTSVIASPQLLVLNKQRAEILIGEQKGYISTTVTETASTQSVEFLE 459 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 + + P + G +RL++H + G V + + ++ T V G T+ Sbjct: 460 IGTQLRLRPFITDDGMVRLEVHPEISD-GDVKVEGQFTLPNKIVTQVTTNVICPDGRTII 518 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +GG+ + +P LG IP G FR + R EL+V +TPR+V + Sbjct: 519 IGGLIKSDLRKKGSQIPYLGSIPILGPAFRQKQETTVRDELIVLLTPRIVDA 570 >UniRef50_B1J8A0 Type II and III secretion system protein n=7 Tax=Pseudomonadaceae RepID=B1J8A0_PSEPW Length = 625 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 91/410 (22%), Positives = 176/410 (42%), Gaps = 35/410 (8%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQA 70 P +++ + VTL D + + + L++ +N + D+ ++ + +V + A Sbjct: 177 FPQLRSKLERPVTLEFRDAELKVIFEVLSQVAGINFIFDKDLRPDMKATIFVREVRIEDA 236 Query: 71 LQTVVKSAGL-ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 + +++ L N L V+ + Q + + L R+ L DA Sbjct: 237 IALLLEQNQLRQKIVNDNTLLVYPDSPQ------------KTKDYQELVMRTFYLTSIDA 284 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 + +L + + VD+R N L +RD A+ E+ + D +V L ++ Sbjct: 285 NTALNMVKTMLKTR-DVFVDERLNTLTMRDTPDAVRMAEKLLQSQDQSNPEVVLEVEVME 343 Query: 190 INEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN-GRLLDLEL 248 + + +LG++W G ++ G+ +SV G N GRI+ ++ Sbjct: 344 VARSRILDLGLQW-------PNTFGVLSDEGNPVSVLDQLR--GINSGRISISPAPQAKI 394 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY------QVSSGESGATSVEFKEAVL 302 +A Q + ++ +ASP + S+ + A I G +P + G SV + + L Sbjct: 395 NA--QDKDINTLASPVIRVSNREQARIHIGQRVPIISATSVPSTQGPVITESVTYLDVGL 452 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL-AIDKQEIETQVEVKSGETLALG 361 +EV PTV + +K+ + + + G + +D + +T + + GET L Sbjct: 453 KLEVQPTVHLNNEVAIKVALEVSNATPLEPTRQGTIPVQVDTRNAQTSLRLHDGETQVLA 512 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G+ S + +P LGDIP G+LF + + + ELV+ ITPR+V + Sbjct: 513 GLVRNDKTSSGNKIPGLGDIPGLGRLFGSNRDDMSKSELVLAITPRIVRN 562 >UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Marinomonas sp. MED121 RepID=A3YCA1_9GAMM Length = 616 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 73/333 (21%), Positives = 137/333 (41%), Gaps = 25/333 (7%) Query: 100 NIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA-----------KGSMTV 148 N + + A + I LQYADA ++A + ++ + ++ Sbjct: 245 NQIKDLIIKLDIPAEKTSRLQYIPLQYADATKVADLLKGVVGDIEKKEGNAPTLETNIQA 304 Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADA- 207 D+ N LL+ +S + + Q+D+P QV + A IV I ELGV+W + + Sbjct: 305 DEDLNALLVNSEPGVMSEIYSVLKQIDVPRAQVLIEAVIVEITVTDEEELGVQWLIGGSD 364 Query: 208 ------QHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIA 261 T+ S ++ +TA T + + AL+ K ++++ Sbjct: 365 EIISGTNFTSAGSSANTIASSINSSTANTLATGGTAILGDTNFGAIIQALQSKTNSNLLS 424 Query: 262 SPRLLASHLQPASIKQGSEIPYQVS----SGESGATSVEFKEAVLGMEVTPTVLQKGRIR 317 +P++L Q A I G P+Q +S + ++ L ++VTP + ++ Sbjct: 425 TPKILTLDNQEARILVGETRPFQTGEYSEDSDSTFVTTSREDVGLTLKVTPHINSGNEVK 484 Query: 318 LKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 +++ + +E+ET V +T+ LGG+ + VP Sbjct: 485 MEVFQTVESASDEASDLGT---ITTVREVETVVIAGDRQTIVLGGLIQDNITESKQKVPF 541 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 LGD+P+ G LFR +++ L+VFI P ++ Sbjct: 542 LGDLPFVGGLFRSSSFSIDKKNLLVFIRPTIIR 574 Score = 74.1 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 10/172 (5%) Query: 9 LLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWK 68 L MLIP + K +V L ++ ++ +AE + +V P V G V++ +++ Sbjct: 16 LCMLIPLLAIGKTWQVNL--QQADISIFIRQVAEMTDRSFIVDPRVKGKVTV-ISNASLD 72 Query: 69 QALQTVVKSAGLITRQEGNILSVHS--IAWQNNNIARQEAEQARAQANLP---LENRSIT 123 + V + + G + NIA+Q P + R + Sbjct: 73 E--DAVFRLFLSVLTVHGYAVLESPEGFKILPQNIAKQGGLNFDPSGGAPGELMVTRVLA 130 Query: 124 LQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 ++ A A EL L+ G + N L++ D+ + +LE V ++D Sbjct: 131 IKNAVAAELVPILRPLIPQYGHLAAVPTMNALIISDHADNIRSLEDLVERLD 182 Score = 47.9 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 63/155 (40%), Gaps = 15/155 (9%) Query: 38 QALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTVV-KSAGLITRQEGNILSVH 92 Q +A+Q LN S G + + + + + + + ++ Sbjct: 103 QNIAKQGGLNFDPSGGAPGELMVTRVLAIKNAVAAELVPILRPLIPQYGHLAAVPTMNAL 162 Query: 93 SIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL----------SA 142 I+ +NI E R + + E I L++A AG++ ++L S Sbjct: 163 IISDHADNIRSLEDLVERLDSTIEGEMAVIPLKHAWAGDVITLLQELTTTTTGKGARSSD 222 Query: 143 KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 ++ D+RTNRL+L+ L+ ++ + ++D+P Sbjct: 223 VTTIVADERTNRLILKGKPGELNQIKDLIIKLDIP 257 >UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVD5_9GAMM Length = 694 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 84/373 (22%), Positives = 160/373 (42%), Gaps = 53/373 (14%) Query: 90 SVHSIAWQNNNIARQEAEQARAQANLPLE----NRSITLQYADAGELAKAGEKL------ 139 +SI + AR ++ A + PLE + + L+YA A ++A+ + + Sbjct: 242 RTNSILISGSKAARDRIKKLIASMDTPLEQGGNTKVVYLKYAKAEDMAEILKGVNEGQKK 301 Query: 140 ---------------LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELS 184 + + D TN L++ AL +E V Q+D+ QV + Sbjct: 302 AAEAAGGKAAAATVSSDKEVDIQADPGTNSLIITAAPDALRNIESVVRQLDIRRAQVHVE 361 Query: 185 AHIVTINEKSLRELGVKWTLADAQHA-------------------GGVGQVTTLGSDLSV 225 A IV +++ + RELG + A+ G+ +T + Sbjct: 362 AIIVEVSDTAARELGFSYLFANENGFDNETNPVGGALLGGGGDVINGIAAASTGDGSGAS 421 Query: 226 ATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 VGF +G + L A+ + +++++P ++ + A I G +P+ Sbjct: 422 VPNGFTVGFGDRDNSGNVFAGILRAVASDTEANLLSTPSIVTLDNEEAEIVVGQNVPFVT 481 Query: 286 SSGESGAT-------SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV 338 S + ++ +VE ++ + +++TP + + IRL I Q V Sbjct: 482 GSYTTASSGANNPFQTVERQDVGVTLKITPQINEGDVIRLD--IEQEASSVVESSVASGQ 539 Query: 339 LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR 398 L +K+EI+T V ++ G+ L LGG+ + + VPLLGDIP G+LF++ +++R Sbjct: 540 LITNKREIKTSVMIEDGQMLVLGGLIDDQTRKSLFKVPLLGDIPLLGRLFQYRTNSNDKR 599 Query: 399 ELVVFITPRLVSS 411 L+VF+ P+++ Sbjct: 600 NLMVFLHPKILRD 612 Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 66/166 (39%), Gaps = 6/166 (3%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQAL 71 QAA + TL + D + ++ +A++ N V+ P V V++ ++ + Sbjct: 34 AQAADEESFTLNLKDADIEALISTVAKKTGRNFVIDPRVKARVTVISSQAMSGNELYEVF 93 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 Q++++ G G+++ + + L + I ++ A + Sbjct: 94 QSILQVHGYAAVPAGDVIKILPEVNAKQGAVPTITNGQGMGDD--LVTQVIPIRNVAAAQ 151 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 L L+ +G + +N +++ D + +S L + ++D P Sbjct: 152 LVPILRPLVPQQGHLAAYSGSNIIVITDRASNISRLADIIGRIDRP 197 >UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gammaproteobacteria RepID=B4SL34_STRM5 Length = 793 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 84/344 (24%), Positives = 150/344 (43%), Gaps = 29/344 (8%) Query: 93 SIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG-SMTVDKR 151 + A+ Q LE++ + D + AG S G S+ D Sbjct: 307 PGDANRSTPAQPSQPQQAKTGGNALESQRLDPNRRDPID---AGSTGFSQNGISVQADVA 363 Query: 152 TNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG 211 TN LL+ + L + + Q+D QV + + IV +N+ ELGV+W L + + G Sbjct: 364 TNTLLISAPEPVYRNLRRVIDQLDQRRAQVLVESLIVEVNQTDAAELGVQWMLGNGRTFG 423 Query: 212 GVGQVTTLGSDLSVATATTHV------GFNIGRINGRL----------LDLELSALEQKQ 255 G T G A T + G IG I+G + + +AL+ K Sbjct: 424 GTHFGGTNGGSGLNTAARTTLDVLPKDGLKIGVIDGTINLPGVGQILNMKALANALQSKG 483 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQ----VSSGESGAT----SVEFKEAVLGMEVT 307 +I+++P L+ + ASI G +P+ V+ G G+ ++ ++ L + V Sbjct: 484 GANILSTPNLMTLDNEAASIMVGQTVPFVSGRYVTDGGGGSNNPFQTIVREDVGLKLRVR 543 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 P + + G ++L ++ + + ++ +K+ ++T V + G+ + LGG+ Sbjct: 544 PQISEGGTVKLDIYQEVSSIDAQSANSTVGIIT-NKRALDTSVLLDDGQIMVLGGLLEDS 602 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G+D+VP LG IP G LFR D ++ + L+VF+ P +V Sbjct: 603 VSHGRDAVPGLGKIPVLGALFRSDTRKRAKTNLMVFLRPHVVRD 646 Score = 84.9 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 10/167 (5%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWK--QALQT 73 Q A+ + V L + + + VL+ A +V P V+G +++ ++D P QA Q Sbjct: 28 AQDARDEPVQLNLVETDIGGVLRMAARFTGRQFLVDPRVTGKMTV-VSDGPVSRTQAYQL 86 Query: 74 VV---KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 ++ + G + G + V A R A A + R+ L+Y +A Sbjct: 87 LLGALRMRGFAVVENGGVSRVVPQADAKLLGGRVGAGGAGGEVA----TRTFALRYENAA 142 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 L ++S +T + N L++ D L + + +A +D P Sbjct: 143 ALVAVLRPMISPDNPITANPGNNTLVITDYADNLERIARVIASVDTP 189 Score = 42.9 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 14/167 (8%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGS-------M 146 I +N+ R A ++ + LQ A ++A LL A+G+ + Sbjct: 169 ITDYADNLERIARVIASVDTPAGMDTDVVKLQQGIAVDVAAMVAPLLDAQGAEPNQKVVV 228 Query: 147 TVDKRTNRLLLR-DNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL-----GV 200 D R+N +LLR + Q V ++D + + H+V + +L GV Sbjct: 229 MADPRSNSVLLRSSSPGRTRLARQLVEKLDKAQDE-SGNLHVVYLRNAQANQLAGVLRGV 287 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE 247 +DA G +T L D + +T + G L+ + Sbjct: 288 VAGQSDAPAMGSNEGITPLPGDANRSTPAQPSQPQQAKTGGNALESQ 334 >UniRef50_C9RLY9 Type II and III secretion system protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLY9_FIBSS Length = 603 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 96/391 (24%), Positives = 184/391 (47%), Gaps = 32/391 (8%) Query: 25 TLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQ 84 ++ + V + VL+A+AE+ LNL V D++ TV + DV + L ++ + + R Sbjct: 217 SVDLQSVSLKAVLKAIAEEAGLNLAVYGDLNETVQMSFKDVSLPELLASLFRGSAFTFRL 276 Query: 85 EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE-LAKAGEKLLSAK 143 + + L V E A+A A++ R +L++ + +A+ + + ++ Sbjct: 277 DSSSLWVS-------------EEGAKALADV----RVFSLKHVSPEKAMAQLSKFMKGSE 319 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 +++ + N L+L + A++ E+ + +D+P QV L+ IV + +GV+ Sbjct: 320 LNVSEYREQNALVLGGSPRAIARAEELLKMVDVPQMQVTLACVIVEFRKGRSFAIGVRSG 379 Query: 204 LADA---QHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDII 260 + G LG D+S + A +G I +LELS++E+ + ++ Sbjct: 380 ATRNVGERDIQARGFFDFLGKDISKSGAFGKIG-----ILPDRFELELSSMEENNEAKVL 434 Query: 261 ASPRLLASHLQPASIKQGSEIPYQVSS-GESGATSVEFKEA--VLGMEVTPTVLQKGRIR 317 A PR+ + A + + + Y VS G +++ + +E+TPT+ Q G I Sbjct: 435 ARPRVTTLNGNKAELNVTNTVYYLVSQVSADGYPITDYRSFNDGISLELTPTMTQDGLIT 494 Query: 318 LKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 L + G+ + I + ++T V ++ GETL LGG+ + + +VP Sbjct: 495 LSVSPEIKTAGRSTGDGPRD---ISSRNMKTTVVLRDGETLCLGGLIRKNKTEVRSAVPF 551 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 LG IP G+LF + +E++ EL +FITP + Sbjct: 552 LGSIPILGRLFSYTSEEEDESELAIFITPSV 582 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 37/89 (41%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 P P VTL DV +A+V + L+ +++ V+ HL V + L + Sbjct: 28 PKSVRTSPGAVTLDFVDVSLAEVARTLSLAYGTSILTDDAGDVRVTFHLEGVSLFEGLTS 87 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIA 102 + S GL EG + + QN IA Sbjct: 88 LCASHGLDLVLEGRVYHIRRARVQNGTIA 116 Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 2/126 (1%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V + V ++ V + ++ +N++ DV G VS +L + + A + +++S G R Sbjct: 122 VVIDVKNMNVREFVKEFGLNTGVNVLADYDVDGVVSGNLRRMVPEMAFRVLMESNGFKVR 181 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 E L V N + + + L S+ LQ + KA + Sbjct: 182 GERGCLRVSRAKTGNALNGSSDGAEVSVERAGDLY--SVDLQSVSLKAVLKAIAEEAGLN 239 Query: 144 GSMTVD 149 ++ D Sbjct: 240 LAVYGD 245 >UniRef50_UPI0001C34749 hypothetical protein PretD1_16510 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34749 Length = 354 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 117/322 (36%), Positives = 184/322 (57%), Gaps = 10/322 (3%) Query: 93 SIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE----KLLSAKGSMTV 148 N + A + L + L + E+ E LLS S+ Sbjct: 38 PPLVTENQPTPETAVAQVTPSKTSLTQKIFKLISTNVQEVRHLLEHPDTSLLSKNASIHH 97 Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 D TN L+++++ L+ +++W+ D P QV+++AHI++ + +L+ELG++W + Sbjct: 98 DITTNSLIIKEDPDRLALIDEWIKHQDKPNKQVQITAHIISSSRTALQELGLEWGMM--- 154 Query: 209 HAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLAS 268 AGG L ++ + FN+ + LL+++L ALE++ L IIASPRL+AS Sbjct: 155 -AGGNLNANHLYRYNRYSSISGQFAFNVLSLGDGLLEMKLKALEKENLLSIIASPRLVAS 213 Query: 269 HLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG 328 H QPASI+QG+EIPY S+ + T V+FK+AVLGM+VTP++++ +I L L IS N P Sbjct: 214 HQQPASIQQGTEIPYVTSNDKK--THVQFKDAVLGMDVTPSIVRDEKIELNLKISHNSPD 271 Query: 329 QVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLF 388 L + LAI+KQEI T V +K+ ETL LGGIF +K + + +P L IP+ G LF Sbjct: 272 TALTSSQHHHLAINKQEIATNVTIKNNETLILGGIFQQKQEKTEMGLPFLSHIPFLGTLF 331 Query: 389 RHDGKEDERRELVVFITPRLVS 410 + + ++R L+VFITP+L++ Sbjct: 332 TNTAEHTDKRVLIVFITPKLIN 353 >UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P6R4_AZOSE Length = 769 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 8/290 (2%) Query: 128 DAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 D + + L + D+ N LL+ + +E + ++DL QV + A I Sbjct: 433 DGSQTQATTQFSLGPLVRVVADEFNNALLIYAPGSEYRKIEAALRRLDLSPTQVLIEASI 492 Query: 188 VTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN-GRLLDL 246 + + G++W + + G S T GF+ N + Sbjct: 493 LEVTLSDETRFGLQWFF-EGKLGGDYRGSGLFTDRASETLGRTVPGFSYSITNAAGQVRA 551 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ----VSSGESGATSVEFKEAVL 302 L+A+ QK +++I+SP ++ A I G + P + V+ G + +TS+++K+ + Sbjct: 552 VLNAMAQKSLVNVISSPSVMVLDNHTAVIHVGDQQPIRSTQTVTDGGTTSTSIQYKDTGV 611 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 ++VTP+ G + + + S G V + +++E+ ++V V++GET+ LGG Sbjct: 612 MLQVTPSANAGGMVAMDIKQSVTDVGAVDDATGQR--SFNQREVASKVAVRTGETVILGG 669 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + + +G+ VP L DIP G LF R EL+V ITPR+V S+ Sbjct: 670 LIRDSDTNGKTGVPWLHDIPVLGPLFGTTSDVTRRTELLVMITPRVVQSD 719 Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 7/167 (4%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQA-LAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQA-- 70 V +K V+L + PV A L + KL+ + + G V++H VP + Sbjct: 96 AVNISKGGAVSLKFEQAPVTDFAHAILGDLLKLDYTLHQPLGGEVTIHTQGAVPPDKVLS 155 Query: 71 -LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 L++V+ + GL ++ L + + + LQ+ A Sbjct: 156 ILESVLAANGLTLARDAQGLYHVGRPELLRGLGASAVNVKAIPTGQGMV--VVPLQFVGA 213 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 E+A + A+ + VD N L+L + L +V D+ Sbjct: 214 AEMADILRPVAPAEAFVRVDTLRNLLILSGSGNQLEGWLDFVNIFDV 260 >UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-like n=8 Tax=Pseudomonas syringae group RepID=Q4ZRP9_PSEU2 Length = 776 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 11/283 (3%) Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 L A +T K +N+LL+R +E + ++D P QV++ I+ + ++G Sbjct: 465 LDASTRITAQKSSNQLLVRTRPAQWKEIESAIKRLDNPPLQVQIETRILEVKLTGELDMG 524 Query: 200 VKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFN-----IGRINGRLLDLELSALEQK 254 V+W L G T + A T L + L ALE Sbjct: 525 VQWYLGRLAGNSGTTGNVTNTAGSQGAIGTGGAALASTDAFFYSFVSNNLQVALRALETN 584 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPYQVSS------GESGATSVEFKEAVLGMEVTP 308 + ++++P L+ + Q A I+ G IP +S + +SVE+ + + ++V P Sbjct: 585 GRTQVLSAPSLVVMNNQQAQIQVGDNIPISQTSINTNTNTGTTLSSVEYVQTGVILDVVP 644 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 + G + + + + I + + TQV +SG+T+ LGG+ + N Sbjct: 645 RINPGGLVYMDIQQQVSDADSSGTTDANGNPRISTRSVATQVAAQSGQTVLLGGLIKQDN 704 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 ++VP LG IP LF + K +R EL+V ITPR+++S Sbjct: 705 AETVNAVPYLGRIPGLRWLFGNTSKSKDRTELIVLITPRVITS 747 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 58/158 (36%), Gaps = 7/158 (4%) Query: 24 VTLMVDDVPVAQVLQAL-AEQEKLNLVVSPDVSGTVSLHLTD-VPWKQAL---QTVVKSA 78 + + P+ V+ ++ + N ++ V G VS + V +QAL +T++ Sbjct: 106 IVFNFTNQPIQAVINSIMGDLLHENYSIAQGVKGDVSFSTSKPVNKQQALSILETLLSWT 165 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 ++GN + + E AQ + + R L+Y A E+ K + Sbjct: 166 DNAMIKQGNRYVILPS--NQAVAGKLVPEMRVAQPSAGMSARLFPLRYISATEMQKLLKP 223 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + VD N L L L+ + + D+ Sbjct: 224 FARENAFLLVDPARNVLSLAGTPEELANYQDTIDTFDV 261 >UniRef50_O80300 Virion export protein n=9 Tax=Inovirus RepID=G4P_BPIF1 Length = 429 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 86/442 (19%), Positives = 174/442 (39%), Gaps = 47/442 (10%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MK+ +A+LL +L + + + + +++ PV + + ++ +++SPDV G +++ Sbjct: 1 MKKLLASLLCVL-----SFQSFAIPVELNNAPVREFVSWYSKTTGKPVIISPDVKGEITV 55 Query: 61 HLTDVP---WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQA-------- 109 + DV Q +V+++ G GN V + +E Sbjct: 56 YSADVTKDELPQFFTSVLRANGFDLS-PGNPAVVQKFNRNTYEYSDSFSEPVPASSYDGD 114 Query: 110 ----------RAQANLPLENRSITLQYADAGELAKAGEKLLS----AKGSMTVDKRTNRL 155 + + L ++ + A +LA + L A + L Sbjct: 115 VPPPTGDFFTKPEIRANLITQTYPVNNVRAKDLAPVIDIFLKGENIAGTKVYPLMGRIFL 174 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQ 215 L+ + + L + +D+P QV + + I G ++ A +G Sbjct: 175 LVTASASQHKELAAFFPSVDVPRTQVLVESVIFETTASD----GFDFSFAAGDPSGSPVA 230 Query: 216 VTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 L+ + + G + G NG +L L L ALE + +++ PR+L QP + Sbjct: 231 GGINTDRLT--SVLSSTGGSFGIFNGNILGLSLKALETSSKSTLLSMPRILTMSGQPGTF 288 Query: 276 KQGSEIPYQVS-------SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG 328 G +P+ + + ++E + + ++V P V G + + + + + Sbjct: 289 TAGQNVPFVTGRVTGEAANVNNPFQTIERHDVGISLKVVPVVTPGGLLIMDVSTNADSIS 348 Query: 329 QVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLF 388 +D + + + I T V++KSG+T+ LGG+ + SVP + IP G LF Sbjct: 349 DSQTASD---IITNTRSISTTVQLKSGQTVLLGGMVDNRESDSDSSVPWVSKIPLIGALF 405 Query: 389 RHDGKEDERRELVVFITPRLVS 410 +R L + I R+V+ Sbjct: 406 TSKSSNANKRTLYILIRARVVN 427 >UniRef50_Q48JN3 General secretion pathway protein GspD n=2 Tax=Pseudomonas syringae group genomosp. 2 RepID=Q48JN3_PSE14 Length = 778 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 80/308 (25%), Positives = 140/308 (45%), Gaps = 25/308 (8%) Query: 127 ADAGELAKAGEKLLSAKG-SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 A AG SA G ++ D TN LL+ + L + + Q+D QV + + Sbjct: 407 ATAGSQQAEQNTAFSAAGVTIQADATTNTLLISAPEPLYRNLREVIDQLDQRRAQVVIES 466 Query: 186 HIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATT----HVGFNIGRING 241 IV ++E + GV+W + +GG G V GS L+ +T+ G N+G + G Sbjct: 467 LIVEVSEDDANQFGVQWQTGNLNGSGGFGGVNLGGSGLNTGGSTSIDVLPTGLNVGVVRG 526 Query: 242 RL----------LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 + L + AL+ K +++++P LL + ASI G IP+ S +G Sbjct: 527 AVTIPGIGEVLDLKVLARALKSKGGSNVLSTPNLLTLDNEAASIFVGQTIPFVTGSYVTG 586 Query: 292 A--------TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 +V+ +E L + V P + + G ++L ++ + Q A G V +K Sbjct: 587 GGGTSNNPFQTVQREEVGLKLNVRPQISEGGTVKLDIYQEVSNVDQRASLASGTV--TNK 644 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 + I+T + + G+ + LGG+ ++VP L IP G LFR++ + + L+VF Sbjct: 645 RAIDTSILLDDGQIMVLGGLLQDGYNQSDEAVPWLSRIPLLGVLFRNEARSTSKTNLMVF 704 Query: 404 ITPRLVSS 411 + P ++ Sbjct: 705 LRPYIIRD 712 Score = 84.9 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 67/174 (38%), Gaps = 9/174 (5%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQTV---VK 76 Q + L + + V++AL+ ++ P V+GT++L VP QA + + ++ Sbjct: 94 DQLIQLNFVEADIQSVVRALSRSTGQQFLLDPKVTGTLTLVSEGSVPASQAYEMLMAALR 153 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 G G + V + + A + + R+ LQY +A L Sbjct: 154 MQGFSVVDVGGVAHVVP--EDDARLLGGPVYSADKPSGNGMLTRTFRLQYENAVNLIPVL 211 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 ++S + N +++ D L + Q + +D P + +VT+ Sbjct: 212 RPIVSPNNPINAYPGNNTIVVTDYADNLVRVAQIIDGIDTPSA---IDTDVVTV 262 >UniRef50_P31701 General secretion pathway protein D n=27 Tax=Enterobacteriaceae RepID=GSPD_PECCC Length = 650 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 33/350 (9%) Query: 95 AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL--------------L 140 + +Q Q + + I L+YA A +L + + L Sbjct: 236 EPNSRQRVIDMVKQLDRQQAVQGNTKVIYLKYAKAADLVEVLTGVGDSIQTDQQNALPAL 295 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S+ ++TN L++ + LEQ +AQ+D+ QV + A I + + LGV Sbjct: 296 RKDISIKAHEQTNSLIVNAAPDIMRDLEQVIAQLDIRRPQVLVEAIIAEVQDADGMNLGV 355 Query: 201 KWTLADAQHAGGVGQVTTLGS------------DLSVATATTHVGFN--IGRINGRLLDL 246 +W +A + + L A T GFN + Sbjct: 356 QWANKNAGVTQFTNTGLPITTMMAGADQFRRDGTLGTAATTALGGFNGIAAGFYQGNWGM 415 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVL 302 ++AL + DI+A+P ++ A+ G E+P Q +SG++ +VE K + Sbjct: 416 LMTALSSNSKNDILATPSIVTLDNMEATFNVGQEVPVLAGSQTTSGDNVFQTVERKTVGI 475 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALG 361 ++V P + + + L++ + + + + + + V V SG+T+ +G Sbjct: 476 KLKVKPQINEGDSVLLEIEQEVSSVADAASSSSTNLGATFNTRTVNNAVLVSSGDTVVVG 535 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G+ + + VPLLGDIP G LFR + E ++R L++FI P ++ Sbjct: 536 GLLDKSTNESANKVPLLGDIPVLGYLFRSNSTETKKRNLMLFIRPSIIRD 585 Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 20/172 (11%), Positives = 63/172 (36%), Gaps = 6/172 (3%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVP 66 +L+ A + + + + + +++ +++ P VSGT+++ + + Sbjct: 8 VLLMASSLAWSAEFSASFKGTDIQEFINTVSKNLNKTVIIDPSVSGTITVRSYDMMNEEQ 67 Query: 67 WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 + Q +V+ G N + + + + A + + R + + Sbjct: 68 YYQFFLSVLDVYGFTVIPMDNNVLKIIRSKDAKSTSMPLATDRQPGIGDEVVTRVVPVNN 127 Query: 127 ADAGELAKAGEKLLSA--KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 A + ++ +L +G+ + N +++ + A+ V ++D Sbjct: 128 VAARDFGRSSRELNDNAWRGTCGDYEPANVVVMTGRAGVIHAVMTIVERVDQ 179 >UniRef50_Q1V0G7 Type II Secretion PilQ n=2 Tax=Candidatus Pelagibacter ubique RepID=Q1V0G7_PELUB Length = 518 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 95/444 (21%), Positives = 183/444 (41%), Gaps = 55/444 (12%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 +LI + Q V+ + + ++ ++E ++N++V DV+G++S L +VPW +A Sbjct: 85 LLISEDFKSLKQNVSFKFQALDFKEAMKLMSEVGQINILVGDDVAGSISAELDNVPWDKA 144 Query: 71 LQTVVKSAGLITRQE--GNILSVHSIAWQNNNIARQEAEQARAQANL-------PLENRS 121 ++ + NI+ V + A + + A + + + P+ + Sbjct: 145 FNALLDLKNYAADIDVASNIIRVSTPANLTSQEGYKSARASAVKKKVELEDSVEPIISEI 204 Query: 122 ITLQYADAGELAKAGEKLLSAKGS--------MTVDKRTNRLLLRDNKTALSALEQWVAQ 173 L Y E +L ++ G+ +T + T +++R + L +++ + + Sbjct: 205 FRLYYITPSEAKATITELFTSVGTNGNFIPIQVTEEATTRSIIVRGKEKDLDIVDKVIRE 264 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWT----------------------------LA 205 +D QV + A IV + LG + L+ Sbjct: 265 IDKRTKQVLIEAFIVEATSTFEQSLGKRLGAAYTRKSLRMGGTQGGSSVGAASGTGAALS 324 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRL 265 D+ A G T + A AT+ +G + + +L LEL LE + +++P+L Sbjct: 325 DSTGAFTSGAGTDNLVNFGSAAATSGIGI-LKKTGSAVLKLELDFLEAQGLSKTVSNPKL 383 Query: 266 LASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQN 325 Q ASI QG I GE +A L + VTP ++ G + L + ++ + Sbjct: 384 FTLDNQQASINQGETIYIDGGEGEDKPV-----DASLKLIVTPNIIGDGNVMLSIQVNND 438 Query: 326 VPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFG 385 P + + G ++K EI T++ V G+ + +GGI + + VP +P G Sbjct: 439 TPNRANAASVG----VNKMEINTKLLVADGDIVVIGGIKKNNVANNRQGVPGTSKVPILG 494 Query: 386 QLFRHDGKEDERRELVVFITPRLV 409 ++ D EL+VFI PR++ Sbjct: 495 KVLSGKSNSDTMNELLVFIAPRIL 518 >UniRef50_A8URL9 Putative type II secretion system protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URL9_9AQUI Length = 518 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 98/452 (21%), Positives = 187/452 (41%), Gaps = 61/452 (13%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSP--DVSGTVSLHLTDVPWKQALQT 73 + + + ++ P+ +VL A+A+ LNL+VSP DV+ T++ +VP K+AL+ Sbjct: 69 IDPFEGKTFSMSAVSAPLTKVLYAIADGSGLNLIVSPEVDVNRTITATFNNVPMKEALEI 128 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNI-------------------------------A 102 ++ GL GN+L V + I Sbjct: 129 IMDMTGLYYEVRGNVLYVKEFMTKTFRIPYIHTTTNFNSSLGGDVLGGALTSGGTYGTAT 188 Query: 103 RQEAEQARAQANLPLENRSITLQYADA-------GELAKAGEKLLSAKGSMTVDKRTNRL 155 + TL Y + +L + + +LS +G +++ T L Sbjct: 189 TGVTAGTTGGIGATGLRGNFTLDYKNPEGANDLYKQLEENVKNMLSKEGKFVLNRFTGTL 248 Query: 156 LLRDNKTALSALEQWVAQMDLPV-GQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVG 214 ++ D + + +E++V + QV + A IV I + + G+ W+ + G G Sbjct: 249 VVTDRRRNVERIERFVKGFVRKIGKQVLIEAKIVEIALSDVFQYGIDWS-TFFRDVFGTG 307 Query: 215 QVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 TL LS+ T GF + ++AL ++ +++PR++ S+ Q A Sbjct: 308 ANVTLSQTLSIPTG----GFFSLNVVSSDFSTLVNALATYGKVYTLSNPRIMVSNGQTAL 363 Query: 275 IKQGSEIPY--------QVSSGESGATSVEFKEA--VLGMEVTPTVLQKGRIRLKLH-IS 323 I G P+ ++ ++ + + VTP + G I + + ++ Sbjct: 364 IATGIVTPFFERQAVTITGTTTTQIQENIVKTNVLEGVLLGVTPYIDDNGSIVMNIIPVA 423 Query: 324 QNVPGQVLQQADGEV----LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLG 379 + G + +G+V ++ +E T V V++GE + +GG+ + VP LG Sbjct: 424 TRLEGSKTLEVNGQVLAEAPILNIKETGTIVRVRNGELVVIGGLIGDVRSVQERKVPGLG 483 Query: 380 DIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 DIP G LF+ E+REL++F+ PR++ + Sbjct: 484 DIPVLGYLFKSKRTVKEKRELIIFLRPRIIDN 515 >UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P591_9PROT Length = 690 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 77/360 (21%), Positives = 149/360 (41%), Gaps = 50/360 (13%) Query: 102 ARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK------------------ 143 ++ + + AN P + L+ ADA +LA+ +LS + Sbjct: 251 VKELVTKLDSAANTPGNIHVVQLKNADATKLAQTLRSVLSGETAPPAAPSTVPQSAGVAT 310 Query: 144 ---GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 G + D +N L++ ++ + L + ++D+ Q+ + A IV + E GV Sbjct: 311 SSTGMIQADPSSNALIVTASEPIYNNLRSVIDKLDVRRPQIFVEALIVEVTADKAAEFGV 370 Query: 201 KWTLADAQHAGGVGQVTTLGS----------DLSVATATTHVGFNIGRINGRL------- 243 +W G + D + +T + G NIG +NG Sbjct: 371 QWQNLVGASKSGAHIIGGTNFGSVASGNNIIDAANNLSTVNQGLNIGIVNGTTTIPGVGT 430 Query: 244 ---LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS--------SGESGA 292 L + ALE +I++ P L+ + A I G +P+ + + Sbjct: 431 VLNLGMLARALETDTNANILSEPNLMTLDNEEAKIVVGQNVPFITGQYAQTGSATTATPF 490 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 ++E K+ L +++ P ++Q G ++L+++ + + ++ +K+ IE+ + V Sbjct: 491 QTIERKDVGLTLKIKPQIMQGGTVKLQIYQEVSSVLPSSSSSTSGLIT-NKRSIESNILV 549 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + + LGG+ Q PLLGDIP G LFR+D ++ + L+VFI P ++ + Sbjct: 550 DDNQIVVLGGLIQDSVNDVQSKTPLLGDIPILGSLFRYDTRQHTKTNLMVFIRPYIMYQQ 609 Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 78/187 (41%), Gaps = 14/187 (7%) Query: 1 MKQWIAALLLMLIPGVQAAKPQK---VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT 57 ++ + L + + A+ ++ VTL + + +V++A+++ K N +V P V GT Sbjct: 7 LRSLLIFSLAIFVAAPCHAEKKEDELVTLNFVNADIQEVIRAISQISKKNFLVDPRVKGT 66 Query: 58 VSLHLTDVPWKQAL--QTVV---KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQ 112 +++ ++ P AL ++ + G + + + A A+Q + Sbjct: 67 INI-VSATPVSPALGYDILLSALRLQGYAAVESNGVTQIIPEAE-----AKQHIDSLAQG 120 Query: 113 ANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVA 172 L L+Y A +L ++S + +N L++ D +++ +++ + Sbjct: 121 RGDKLVTHVFVLKYESASQLVNVVRPMISPNSVVVAYPASNALVVTDYASSVRRIDKLID 180 Query: 173 QMDLPVG 179 +D P Sbjct: 181 SIDQPSA 187 >UniRef50_A7BV51 Bacterial type II and III secretion system protein n=1 Tax=Beggiatoa sp. PS RepID=A7BV51_9GAMM Length = 442 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 138/340 (40%), Gaps = 49/340 (14%) Query: 119 NRSITLQYADAGELAKAGEKLLSA----------------KGSMTVDKRTNRLLLRDNKT 162 + I L+YA+A +L + + + K ++ D+ TN L++ Sbjct: 61 TQVIYLRYAEAKDLVNVLKGISDSLVENQKKKGKSPSPEIKTNIQADESTNSLVITATPK 120 Query: 163 ALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW-----------TLADAQHAG 211 L+ + Q+D+ QV + A I I+ + RELGV+W L++ ++G Sbjct: 121 VQQNLQTVIRQLDIRRAQVLVEAVIAEISTDTARELGVQWLLYGNKGTAPFGLSNFDNSG 180 Query: 212 -------GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLD--LELSALEQKQQLDIIAS 262 G + S S+ +GR N L+ + L AL +++++ Sbjct: 181 TRIADLASAGYLANNNSSTSLPNIGAGAFLGLGRFNNSFLNFGVLLRALASDTNTNVLST 240 Query: 263 PRLLASHLQPASIKQGSEIPYQVSSGESGA-----------TSVEFKEAVLGMEVTPTVL 311 P LL Q A I G +P+ + +++ ++ + + V P + Sbjct: 241 PSLLTLDNQEAEIVVGQNVPFVTGQYTNTGTSGGGGVTNPFQTIQREDIGIKLRVKPQIN 300 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 + + KL I Q V + +K+ I+T V V+ G + LGG+ + Sbjct: 301 EGNAV--KLEIEQEVSSLSRSSQATTDIVTNKRTIKTTVIVEDGNMVVLGGLIDEDLQQT 358 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VP LGD+P G LFR + +R L+VF+ P ++ Sbjct: 359 AQKVPGLGDLPIIGHLFRSRSTQKIKRNLMVFLHPVIIRD 398 >UniRef50_A1WZM1 General secretion pathway protein D n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZM1_HALHL Length = 670 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 76/316 (24%), Positives = 139/316 (43%), Gaps = 28/316 (8%) Query: 121 SITLQYADAGELAKAGEKLLSAK---------GSMTVDKRTNRLLLRDNKTALSALEQWV 171 I L+Y+DA + E + S+ + TN L++ ++ L V Sbjct: 284 VIYLRYSDAESIVPILEGMAEGMARGPEGETGVSIHDHEATNALIINGPPDLVAKLRGVV 343 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG-------GVGQVTTLGSDLS 224 ++D+ QV + A I ++ + +ELG++W Q G G G VT +G + Sbjct: 344 NRLDVRRAQVLVEAIIAEVSAERSQELGIQWGALGDQGVGLVNFDAAGGGSVTNIGRAAA 403 Query: 225 VATA-----TTHVGFNIGRIN-GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQG 278 T + G G G L + L AL + +I+++P ++ + A I G Sbjct: 404 GGTDALGNLSLGSGLTAGAATRGGELGVLLRALSSESDSNILSTPSVMTMDNEEAEIVVG 463 Query: 279 SEIPYQVS---SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 +P+ S++ ++ + + + P + + LKL I + V V ++ + Sbjct: 464 QNVPFVTGREVGDTRDFQSIQREDVGVQLRIRPQINEGD--SLKLDIEKEVSD-VQERGE 520 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 E + + I T V GE + LGG+ + +S D VP LG IP G LFR++ Sbjct: 521 AEDIVTSMRSITTSAMVDDGEIMVLGGLMDEQAESQTDRVPGLGSIPGLGWLFRYESSAA 580 Query: 396 ERRELVVFITPRLVSS 411 +++ L+VF+ PR++ + Sbjct: 581 QKQNLMVFLRPRIIEN 596 Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 71/178 (39%), Gaps = 5/178 (2%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-- 60 +A +L++ A + +TL +D + V+ ++E+ N VV P V G +++ Sbjct: 30 ALLAPMLVVADDDAWAERGDGITLNFEDADIKSVIALVSERTGRNFVVDPRVRGELTVIS 89 Query: 61 --HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 + D Q + ++ G + + + E A++ Sbjct: 90 SQPVDDDQLYQVFLSALQIHGFAAIPADGAIRIVPKNIAKRDQTP-VPEPGTAESGHNFV 148 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + I +++ +A EL L+S + + TN L++ + + L++ + ++D Sbjct: 149 TQVIPIEHVEASELIPLLRPLISDEAELAAYSETNTLIVSETAGNIGRLKRLIDRVDQ 206 Score = 41.7 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 8/108 (7%) Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 + A L E N L V A NI R + R + + L++ A E+ Sbjct: 169 LISDEAELAAYSETNTLIVSETAG---NIGRLKRLIDRVDQDTTGVTEVVPLEHGSASEI 225 Query: 133 AKAGEKLLSAKGS-----MTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + E + K + + D R+N +L+ + ++ + + ++D Sbjct: 226 VEMVEAIEPEKRAGRRLLLAADDRSNSVLVGGDPARRPSVMELIQRLD 273 >UniRef50_A1WTW1 Pilus (MSHA type) biogenesis protein MshL n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTW1_HALHL Length = 538 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 93/448 (20%), Positives = 178/448 (39%), Gaps = 52/448 (11%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 P + + + D V + L E N+VV PD+ G +SL L DV + + T Sbjct: 74 PLALQPEDPRFDITADGVGAREFFHGLVEDTPYNVVVHPDLEGELSLTLRDVSVPEVMDT 133 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARA----------------QANLPL 117 V + G +Q + + R+ + + Sbjct: 134 VREIYGYEYKQARTGFLILPARPRAEVFHLDYLNVHRSGHSGTRVTSGEITGEDDGDGVI 193 Query: 118 ENRSITLQYADA-GELAKAGEKLLSAK--GSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 +R T +D G++ + +++ S+ + L +R +L +E +V ++ Sbjct: 194 GSRVDTASNSDLWGQVEETVSRMIDDDDTASVVASPQAGTLAVRGMPESLRRVEAFVDRL 253 Query: 175 D-LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVG 233 QV L A I+ + + G+ W + G +L +++A Sbjct: 254 QGSLNRQVILEARILEVELGDDFQAGISWESLGRHDGQALEGSFRPGDNLELSSAGV--- 310 Query: 234 FNIGRINGR-----LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV--- 285 FNIG G+ + L ALEQ+ + ++++P++ + Q A IK G++ YQ Sbjct: 311 FNIGITRGQDGQRGFFEGFLRALEQQGDVQVLSTPQVSTLNNQKAVIKAGTDSFYQTDFS 370 Query: 286 ----SSGESGATSVE------FKEA--VLGMEVTPTVLQKGRIRLKLHISQNV------- 326 + G T+ + F+ + ++VTP + + G I L + S Sbjct: 371 INYRTVEVGGQTTTQPELDPDFEPFFSGIALDVTPQIEESGWINLHVQPSVTEVRERERT 430 Query: 327 --PGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWF 384 G+ + + D ++ ++ V +SGE + +GG+ + + VPLLG +P Sbjct: 431 LRTGRGDDEVRFSLAESDVRQSDSIVRARSGEMIVIGGLIEEREQQETSRVPLLGRVPLL 490 Query: 385 GQLFRHDGKEDERRELVVFITPRLVSSE 412 G LF + +E + ELV+ + PR+V + Sbjct: 491 GWLFTQERQESSKYELVILLRPRVVGED 518 >UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBE1_9GAMM Length = 630 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 84/348 (24%), Positives = 152/348 (43%), Gaps = 29/348 (8%) Query: 92 HSIAWQNNNIARQEAEQARAQANLPLE----NRSITLQYADAGELAKAGEKLLSA----- 142 +SI + R++ + + PL+ + L Y DA E+ E L + Sbjct: 234 NSILLAGDPAKRKQFRNLIKKLDKPLDGQGNTDVVYLHYVDASEIVPILENLAKSIQSNQ 293 Query: 143 -----KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 S+ K N L++ + L+ ++ ++Q+D+ QV + A +V + + + Sbjct: 294 KDTDSNISIEASKSANALVINAPPSILTTMKSIISQLDIRRAQVMVEAILVEVRGELASD 353 Query: 198 LGVKW------TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 +GV W ++ A + G + SD S + GF G NG L L AL Sbjct: 354 VGVTWITDPDNSIVGAVNTLGNLPLANAPSDGSALPFSAGRGFTFGYFNGGDLQAALRAL 413 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKEAVLGM 304 Q +I+++P ++A + AS+ G +P+ S A T++E ++ + Sbjct: 414 SATQNANILSTPTIVAIDNEEASLLVGQNVPFITGQATSSASSTNDPFTTIERQDIGTSL 473 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 VTP + Q I L++H + A + +K+EI T+ ++ + L +GG+ Sbjct: 474 VVTPRINQGDSITLEIHQKTETIAPSIDIASD--IVTNKREIITKALIRDDQVLVIGGLI 531 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + + VPLLGDIP+ G LF G + L+VFI P ++ + Sbjct: 532 NDEETEIIEKVPLLGDIPYLGSLFSSKGTSHTKTNLMVFIHPTILKDD 579 Score = 79.9 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 73/171 (42%), Gaps = 10/171 (5%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWK-- 68 +L A +K+T+ + D + ++Q +A+ N+VV DV G V++ L+ P Sbjct: 21 LLSLSQLAYSAEKLTMNMRDADIRALIQWVADNTGKNIVVHRDVKGKVTV-LSPEPLTVD 79 Query: 69 ---QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQ 125 Q +V++ + L + + A A + + I ++ Sbjct: 80 EAYQVFLSVLQVHEYAVIETPEALKIVPRSI----AASGALPYAASSTTADMVVSIIKIE 135 Query: 126 YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 A ++A+A L+S + TN L+L D+ + +S+ ++ + Q+D Sbjct: 136 NTSALQMAEALRPLMSKDAVIKPYLATNALVLADHASNISSAQELIQQLDK 186 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG--------S 145 +A +NI+ + + E I LQ+ADA + ++ LL + + Sbjct: 167 LADHASNISSAQELIQQLDKTSDSEIDVIVLQHADAESILQSLSTLLPSGSQQASALNIT 226 Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 +++++R+N +LL + + ++D P Sbjct: 227 ISINERSNSILLAGDPAKRKQFRNLIKKLDKP 258 >UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gammaproteobacteria RepID=Q31J27_THICR Length = 703 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 22/339 (6%) Query: 92 HSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKR 151 + IA + + ++ +I + ++ + +K L ++ S+ ++R Sbjct: 270 AELVPVLQKIATNRSLLSSVSSDAKTSEATIPDATGNGVQVNQLDDKTLKSRISIEAEER 329 Query: 152 TNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG 211 N +++ +S L+ + Q+D+ QV + A +V + E ELGV+W A G Sbjct: 330 MNAIIISAPPGVVSVLKTVIKQLDIRRAQVLIEAILVEVTETKQAELGVEWGAAGPNGVG 389 Query: 212 ----------GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIA 261 +G + + + F +G + AL + +I++ Sbjct: 390 LINFSGTIPTIIGNAGNPAAQANAIGTGVNAAFGEVSADGTGWGALIRALNSDSEANILS 449 Query: 262 SPRLLASHLQPASIKQGSEIPYQVSSGE---------SGATSVEFKEAVLGMEVTPTVLQ 312 +P LL + A I G E+P+Q S + ++E K L ++VTP + + Sbjct: 450 TPTLLTLDNEEAEIVVGKEVPFQTGSYTSTGTSSTPTNPFNTIERKNVGLSLKVTPQINE 509 Query: 313 KGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQ 372 + L+++ + V+ + D + K++I+T+V V G + LGG+ T K + Sbjct: 510 GDEVFLEINQEISD---VIPKGDAVDVQTSKRQIKTRVIVGDGNVIVLGGLLTEKETEVE 566 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VP LGDIP G LFR E E+ L+VF+ P +V Sbjct: 567 KKVPGLGDIPGLGALFRSTSNEREKVNLMVFLRPVIVRD 605 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 71/164 (43%), Gaps = 10/164 (6%) Query: 19 AKPQKVTL--MVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQALQ 72 ++ ++VTL + +V++A+A+ N ++ P V G V+L + + L Sbjct: 25 SQSEEVTLKQNFQQADIEKVIEAVAKLTGKNFIIDPRVKGKVTLIAPEAMPPEDLYETLL 84 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 ++ G + + + + + + + IT++ A +L Sbjct: 85 AILHVHGYVAIPGKTAIQIIPANLARDQV----PYENPSAQQSDWVTEVITIEKVPATKL 140 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 L++ +G + +NR+++ D+++ ++ L+Q + ++D+ Sbjct: 141 VAVLRPLVAREGHLVALSESNRMIVTDSQSNIARLKQVIKRVDV 184 Score = 47.9 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 13/137 (9%) Query: 51 SPDVSGTVSLHLTDVPWKQALQT----VVKSAGLITRQEGNILSVHSIAWQNNNIARQEA 106 S V+ +++ VP + + V + L+ E N + V +NIAR + Sbjct: 123 SDWVTEVITI--EKVPATKLVAVLRPLVAREGHLVALSESNRMIV---TDSQSNIARLKQ 177 Query: 107 EQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGS----MTVDKRTNRLLLRDNKT 162 R + I L +A A E+ +K++S + ++ D+R+NR++L ++ Sbjct: 178 VIKRVDVDESSGYEVIKLSHASAEEMMLVIKKVMSKSANKQFNVSFDERSNRVILSGDQD 237 Query: 163 ALSALEQWVAQMDLPVG 179 + +A +D+ V Sbjct: 238 TRREMRALIADLDVSVP 254 >UniRef50_B6J4A2 Type 4 pili secretin (Outer membrane porin) n=5 Tax=Coxiella burnetii RepID=B6J4A2_COXB1 Length = 353 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 166/300 (55%), Gaps = 12/300 (4%) Query: 117 LENRSITLQYADAGELAKAGEK----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVA 172 ++ I + YADA LA +LS G D RTN+L + + +T + ++ V+ Sbjct: 39 MKTLIIPIHYADAKLLAAFLNSKKSGILSKFGYAAADVRTNQLWILEEQTHIYLIQSLVS 98 Query: 173 QMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT-LGSDLSVATATTH 231 Q+D+P+ QV + A I++I++ +L LG+ + G + S + A Sbjct: 99 QLDIPIHQVLIKARIISISDHNLHSLGILFGTKTNNAQSNDGLIEDKPNSTIQFGVADIP 158 Query: 232 VGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 + I NG+LLDL LSALEQ+ + +++ P L+ ++ Q A I+ G IPYQ +G+ G Sbjct: 159 I---IKFKNGQLLDLTLSALEQEGRAQVLSCPELMTNNRQTAIIESGEAIPYQEKTGQ-G 214 Query: 292 ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 TSV F +A L ++VTP VL RI L+L+++Q+ L V I Q++ T+V Sbjct: 215 NTSVTFNKATLRLKVTPVVLPGNRILLQLNVNQDKMSSFLVNG---VPTIQTQQLTTKVM 271 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 V + ET+ LGGI+ + + + +P L IP G LFRH + ER++L++F+TP+++S Sbjct: 272 VNNQETVVLGGIYEQSTQQEEAGIPGLHKIPILGGLFRHRQRSSERKQLLIFVTPQIISP 331 >UniRef50_Q3JD22 General secretion pathway protein D n=2 Tax=Nitrosococcus oceani RepID=Q3JD22_NITOC Length = 833 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 79/337 (23%), Positives = 132/337 (39%), Gaps = 32/337 (9%) Query: 102 ARQEAEQARAQANLPLENRSITLQYADAGELA-----KAGEKLLSAKGSMTVDKRTNRLL 156 A QE E QA+ S + AG + ++ + + D N LL Sbjct: 451 ASQEEELRAFQASTENATESPQASGSAAGGIKFTLPGAKDDEDKKPEVRVIPDVENNTLL 510 Query: 157 LRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQV 216 + + + Q+D+P QV + A I + + GV+W + G Sbjct: 511 ISAPPPVYEKILVALHQLDIPPRQVLVEATIAEVTLTDDLQYGVRWFFENT------GVK 564 Query: 217 TTLGSDLSVATATTHVGFNIGRING-RLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 LG A F G + + L L + ++ +++SP+LL Q A I Sbjct: 565 DYLGRGALTAAIPGTSTFTYGLFDAAGAARIVLDTLSSQTKVKVLSSPQLLVLDNQTAEI 624 Query: 276 KQGSEIPYQVSS----GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV- 330 + G +IP Q S G + T ++F++ + + VTP V GR+ ++L G Sbjct: 625 RVGDQIPIQTGSTIGIGGNSTTRIQFRDTGVLLTVTPRVNAGGRVTMELTQEVTDVGGTK 684 Query: 331 ---------------LQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSV 375 Q G ++ + V V+SG+T+ LGG+ + + Sbjct: 685 LPTSAAPSGDGDDDNNNQTVGNNPTFLQRSFRSVVTVQSGDTIVLGGLIRDNERFSDSGL 744 Query: 376 PLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 P L +P G LF K R EL+V +TPR+V ++ Sbjct: 745 PFLHKLPLIGPLFGATAKSKSRTELIVLMTPRVVRNQ 781 Score = 71.0 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 66/168 (39%), Gaps = 7/168 (4%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLH----LTDVPWK 68 P + + L ++ + +V++ L + + N V+ V GTV++ L Sbjct: 94 PRTFQVREGAILLNFENTDIREVVKTILGDILEENYVIDRAVQGTVTVQTGRPLPKDALM 153 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 L+T+++ Q + + + +RA++ + + R + L Y Sbjct: 154 PTLETLLRLNNAALIQAEGLNKIVPLNQAVQ--GNLSPRLSRAKSTVGYDVRIMPLDYIG 211 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 AGE+ K E + G + VD N L+L L ++ + D+ Sbjct: 212 AGEMEKILEPFVPKDGLVRVDPARNLLILAGTAKELDQWQETIDIFDV 259 >UniRef50_B1Y6L5 Type II and III secretion system protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6L5_LEPCP Length = 596 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 101/433 (23%), Positives = 176/433 (40%), Gaps = 65/433 (15%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQALQTVV 75 A +++TL + DVP+ L +LA L L+ DV +L LTD +AL+ ++ Sbjct: 64 ALLERRITLQLRDVPLGLALDSLAGSTGLRLIRDRDVRTDARSTLFLTDARVGEALEVLL 123 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 S L R L + N A+Q L+ R+ L++ +A +A Sbjct: 124 LSQQLAMR----ALDGRTALIYPNTPAKQRTYGE-------LQVRTFVLRHTEAATMATL 172 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 + L+ ++ S+ D R+N L+LRD L EQ +A D P G V + ++ +N + L Sbjct: 173 LKSLVKSQ-SIVTDPRSNTLVLRDTPEVLQLAEQLIAINDRPSGDVVIEVQLIEVNRQRL 231 Query: 196 RELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQ 255 LG+ W + + + + S T L L L+ Q Sbjct: 232 SRLGLSWPTSLS-----------IATPASATTLGALRALGGDAWLASPLALGLNLQLQDI 280 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSS---------------------------- 287 +IA+P + A H + A + G ++P + Sbjct: 281 GATVIANPSVRARHKEKARLLIGDKVPVMTTQLASMGGSGASAAAPATTAPVTAAEGQAG 340 Query: 288 --------GESGAT----SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 G+ G SV++ + +EV P V G + L + I + Q L Sbjct: 341 QAEQAGQAGDGGTVMFSGSVQYIDVGFKLEVEPQVHADGDVDLDIDIELSQITQTLDTDS 400 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 G + ++ +T + ++ GET LGG+ R+ ++ +P L +P G+LF + ++ Sbjct: 401 GVAYQLGVRQAQTSMRLRDGETQWLGGLIRRQERAAMSGLPGLSQLPVIGRLFGLESQDT 460 Query: 396 ERRELVVFITPRL 408 ELV+ +TPR+ Sbjct: 461 ADTELVLAVTPRI 473 >UniRef50_C9M548 Putative bacterial type II/III secretion system short domain protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M548_9BACT Length = 531 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 88/380 (23%), Positives = 171/380 (45%), Gaps = 29/380 (7%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVS-PDVSGTVSLHLTDVPWKQALQTVVKSA 78 K +++T+ + +V VA L+ AE K +++V P+ S TV+L L DV ++AL+ + SA Sbjct: 146 KEKRLTMSLTEVKVADALRLAAEGLKCSIIVDEPETSPTVTLSLRDVTAQEALELITASA 205 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 G + G+ + V + + + +S + +AD G+ + Sbjct: 206 GYGWAKIGSTILVGPRSVLAARLGKNGL-------------KSYDVFWADPGKTGALVKS 252 Query: 139 LLSAKG--SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 ++ G +++VD+R NR+ ++ + + +AQ+D P QV + A I+ +N+ + Sbjct: 253 IVGLVGDDAVSVDERRNRIYVKGTPAQQEQVRELLAQLDEPADQVMIKARIIEVNDDATS 312 Query: 197 ELGV-------KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELS 249 E+ +W L+ + +G + + G R+LD ++ Sbjct: 313 EMESVLQAVYHQWWLSFSSGVASLGFFDSSSPLAPSSGTAQGAG-----TVARMLDARIA 367 Query: 250 ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPT 309 L +K + ++A P ++ A+IK + Y ++G +E +EVTP Sbjct: 368 GLVEKGKARVLADPTVVVLDGHKATIKLVDRVKYVSWRDDAGNPGYSDEEVGPRLEVTPR 427 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGE-VLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 V +G + + + + Q + GE V I ++E+ + V V G+ +GG+F Sbjct: 428 VGSEGGMTISMALKTGEIVQWKRGGLGEDVPQISEREVSSSVRVLDGQPFVVGGLFKESV 487 Query: 369 KSGQDSVPLLGDIPWFGQLF 388 +P+LGD+P G LF Sbjct: 488 SKTTQRIPVLGDLPLLGSLF 507 >UniRef50_C7HZF2 General secretion pathway protein D n=1 Tax=Thiomonas intermedia K12 RepID=C7HZF2_THIIN Length = 884 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 127/308 (41%), Gaps = 38/308 (12%) Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 L G++ D N L++ + L + + ++D+ QV + A I ++ +LG Sbjct: 397 LPQGGTVYADNSLNALIINAPQPVYMQLRRVIERLDVRRAQVYVEALIAEVDANKAAQLG 456 Query: 200 VKWTLADAQHAGGV-----------------------GQVTTLGSDLSVATATTHVGFNI 236 ++W G ++ + L+ + G NI Sbjct: 457 IQWQAIAGSAGNQNAIIGGSNYGTGGSNIINLQAAISGGGSSAATALASGSLAIPNGLNI 516 Query: 237 GRING----RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 G ++ L L + L+ + +I+++P L+ + A I G +P+ Sbjct: 517 GILHNVAGMATLGLLANFLQTQDGANILSAPNLMTLDNEEAKIVVGQNVPFVTGQYAQTG 576 Query: 293 T--------SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 + ++E K+ L ++V P + G I++ ++ + A + +K+ Sbjct: 577 SSATVTPFQTIERKDVGLTLKVRPQITAGGAIKMDVYQEVSSISSTTNAAG---IITNKR 633 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 I+T V V G+T+ LGG+ +P LGDIP G LFR + + ++ +L+VF+ Sbjct: 634 SIQTAVLVNDGQTIVLGGLMQDNVSQNNSKIPGLGDIPGLGALFRSNSRTAQKTDLMVFL 693 Query: 405 TPRLVSSE 412 P +V +E Sbjct: 694 RPIVVRTE 701 Score = 81.8 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 10/228 (4%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQTVV---KSAG 79 +T+ + + +A +QA+A N +V P V G V++ VP ++ Q ++ + AG Sbjct: 59 LTINLVNADIASAVQAVAAATGRNFIVDPRVKGQVTIQFEKPVPPQKVFQALLTQLRLAG 118 Query: 80 LITRQEGNILSVHSIAWQNNN---IARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + + V A + A + + L+ A A L Sbjct: 119 FAVVEHDGVFQVVPEADAKLQSGPVGVGLAPSRIPGRGDQVVTQIFQLRNASASSLLPVL 178 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 L+S ++ V N L++ D L + + +A +D+P G +V + Sbjct: 179 RPLISPNNTINVSPSGNALVVTDYADNLKRIARIIAALDVPTG---TEVTVVPLTYAVAS 235 Query: 197 ELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLL 244 +L T G +VA + + L Sbjct: 236 DLAPTLQKLIDMQTVTSSGPGTPGVQAAVAGSGAMRAVILPETASNSL 283 >UniRef50_D0I542 MSHA biogenesis protein MshL n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I542_VIBHO Length = 533 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 85/450 (18%), Positives = 180/450 (40%), Gaps = 52/450 (11%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 G A +++ + ++V +L + NLV+ PDVSG +++ L DV +AL V Sbjct: 64 GSGAHSEKRLRINANNVDAKVFFGSLVQGSDFNLVMHPDVSGNITVSLKDVTVLEALNVV 123 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN--RSITLQYADAGEL 132 G +G ++ + + + R+ +L + T A +GE Sbjct: 124 SDIYGYNVEIQGRLIQIFPAVLRTETFPVDYLQLQRSGVSLTSISTGAISTDASAGSGED 183 Query: 133 AKAGEKLLSAKG-----------------------------SMTVDKRTNRLLLRDNKTA 163 K+ + G S+ + + + ++ Sbjct: 184 EKSDRTSVPTGGTVIETLTESQFWAQLERAVSGMIGTGDGRSIVISPQAGLITVKAYPNE 243 Query: 164 LSALEQWVAQMDLP-VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD 222 L +++++ QV L A ++ + + GV W+ A G ++ + Sbjct: 244 LREVKRFLDASQKRLKRQVILEAKVLEVTLSDGYQQGVNWSNIGASIGSGGINISRPETK 303 Query: 223 LSVATATTHVGFNIG-RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEI 281 L+ + +G I ++ L+ + +++++SPR+ A++ Q A IK G + Sbjct: 304 LAGDMISNVIGGQTNITITDGNFSSVMNFLDTQGDVNVLSSPRVTAANNQKAVIKVGGDE 363 Query: 282 PYQVSSGESGAT--------SVEFKEA--VLGMEVTPTVLQKGRIRLKLH------ISQN 325 + S + ++E + ++VTP + + L +H +++ Sbjct: 364 YFVTDISSSDTSGDNSDSGPNIELTPFFSGILLDVTPQIDDDNGVLLHVHPAVVDVVTEE 423 Query: 326 VPGQVLQQADGEVLAIDK---QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIP 382 Q+ ++ VL + K +E ++ + +SG+ + +GG+ + VPLLGDIP Sbjct: 424 KTIQLGTSSEPYVLPLAKTAIRESDSVIHARSGDVVVIGGLMKSSYEEVVSKVPLLGDIP 483 Query: 383 WFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G LFR+ + ++ ELV+ + P +V + Sbjct: 484 GLGHLFRNVNRMKQKTELVILLQPSVVGEQ 513 >UniRef50_D1P0E2 Protein transport protein HofQ n=3 Tax=Providencia RepID=D1P0E2_9ENTR Length = 346 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 114/321 (35%), Positives = 181/321 (56%), Gaps = 11/321 (3%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG----ELAKAGEKLLSAKGSMTVD 149 + + E PL + L DA ++ + KLLS KG + D Sbjct: 32 LLPDEDIPLLAEHTPKIIPVEEPLSEKIFPLISVDAQLVYQQIIQTDLKLLSEKGQASFD 91 Query: 150 KRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQH 209 TN L++ ++K ++ + +W+ Q D+P QV+++AHIV+ +L+ LG++W + Sbjct: 92 TTTNSLIITESKPRMALITEWLKQKDIPQQQVQITAHIVSSTRTALQALGLEWGML---- 147 Query: 210 AGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASH 269 G + T V NI ++ LL+++LSALE+ L IIASPRL+ASH Sbjct: 148 -GEMATNPHHSRYNRYNTEPGKVALNILKLGDGLLEMKLSALEKANLLSIIASPRLVASH 206 Query: 270 LQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQ 329 +PASI+QG+EIPY ++ + + V+FK+AVLGMEVTPT+ + ++ + L IS N P Sbjct: 207 QKPASIQQGTEIPYVTNTDKK--SHVQFKDAVLGMEVTPTISRDNKVEMVLKISHNSPDT 264 Query: 330 VLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFR 389 + + L+I+KQEI T V +K+ +TL LGGIF +K + + +P L +P G LF Sbjct: 265 AITTSQNHHLSINKQEIATSVTIKNNDTLILGGIFQQKQEKTEAGIPFLSQLPLLGNLFT 324 Query: 390 HDGKEDERRELVVFITPRLVS 410 + + +RR L+VFITP+L++ Sbjct: 325 NSFQHIDRRVLIVFITPKLIN 345 >UniRef50_P03667 Virion export protein n=4 Tax=root RepID=G4P_BPIKE Length = 437 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 87/440 (19%), Positives = 181/440 (41%), Gaps = 40/440 (9%) Query: 2 KQWIAA--LLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS 59 K+ I L L+ A + +++ PV +Q +++ +VV+PDV G ++ Sbjct: 7 KKLIFGYVALCFLMTLGIAFNVLADPVNLNNAPVRSFVQWYSQKSNKAVVVNPDVKGNIT 66 Query: 60 LHLTDVP---WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAE--------- 107 + DV ++V+ + G + G+ V + + + + + Sbjct: 67 VFNADVNQANIDDFFKSVLNANGFVL-MAGDPSGVSTPSKLPSQQTDNDDDYEDSADYVP 125 Query: 108 -------QARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG--SMTVDKRTNRLLLR 158 A+ Q L L R+ L + ++ + + + G + N LL+ Sbjct: 126 VGDSVPVSAQPQKPLDLTVRNFKLTRVRSSDVLPLAKIFVDSNGGGDVIDYPGNNSLLVS 185 Query: 159 DNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT 218 + ++AL ++ +D+ QV + + + + + +L A G + Sbjct: 186 GSAAIMNALADFITSIDVARDQVLIQSLMFETSLVNGVDLSFAAGSASGDKVAGGFNTSA 245 Query: 219 LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQG 278 LG+ LS A G + G NG +L L + A++ +I++PR+L Q I G Sbjct: 246 LGTALSTA------GGSFGIFNGNVLALSIQAVKNDSNSKVISTPRILTQSGQTGYISVG 299 Query: 279 SEIPYQVS-------SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVL 331 +P+ + + ++E ++ + ++VTP V+ G++ L + + + Sbjct: 300 QNVPFVTGKVTGEAANVNNPFQTIERRDVGVSLKVTPVVMGNGQLVLTIDTKADSLTSQM 359 Query: 332 QQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHD 391 +D + +++ ++T V++K G+TL LGG+ G SVP +P G LFR Sbjct: 360 TASD---IITNQRHMQTTVQIKDGQTLLLGGLIDSNTTDGNRSVPWFESVPVIGWLFRSH 416 Query: 392 GKEDERRELVVFITPRLVSS 411 R + V +T ++ + Sbjct: 417 SDSHNERTMFVLLTAHVIKA 436 >UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKZ0_MARMM Length = 686 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 11/279 (3%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 ++ ++ D+ N L++R + V +MD+ QV + A I + + + GV Sbjct: 385 QSRLTIIPDELNNALIIRATDQEYREILDLVQRMDVMPPQVLIEATIAEVRLEDGLDFGV 444 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDII 260 +W +A + +TA GFN +G L LSAL + ++ Sbjct: 445 RWYFENA--GSNETSSLQFSDSNTGSTAPVFPGFNYA-FSGTDLTATLSALRSITDVTVL 501 Query: 261 ASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKEAVLGMEVTPTVLQK 313 ++P ++ + Q A ++ G E+P + S +SVE +E + ++VTP + Sbjct: 502 SAPSIMVQNNQTAHLQVGDEVPIVTQTATSVTESNAPIVSSVELRETGVILQVTPRINAS 561 Query: 314 GRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 G + L+++ + + + I K E + V V+S T+ALGG+ + Sbjct: 562 GMVVLEVNQEVSSVRPTTT-SGIDSPTIQKLEFTSTVSVRSSNTIALGGLIRETTSDNES 620 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 PLLGDIP G LFR+ +R ELV+F+TPR++ ++ Sbjct: 621 RTPLLGDIPGVGNLFRNRAMTSQRSELVIFLTPRIIWTD 659 Score = 42.5 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 56/162 (34%), Gaps = 12/162 (7%) Query: 21 PQKVTLMVDDVPVAQVLQAL-AEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTVV 75 + + L DVPVA V++ + + ++V+ V+G +SL AL+TV+ Sbjct: 99 SRTLRLNFVDVPVADVVRTIVGDALGQTVMVADGVTGRISLTSAEPAPARAALAALETVL 158 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 + L+ + + + + +E L R + + + + Sbjct: 159 GESNLVLAERAEGYLLTRLDMARPGLTGLSSE-------LGYGGRVVPVTHTTPSAIVSL 211 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 + LS + + L+L + + D P Sbjct: 212 IDPFLSDRVEVVPHDALGVLVLAGPGPDVDGARRAAILFDRP 253 >UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH25_DESMR Length = 685 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 90/364 (24%), Positives = 154/364 (42%), Gaps = 33/364 (9%) Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 Q V + GL+ + + + N+ + + A A+ + N T G+ Sbjct: 282 QYVAQVKGLLAKLD------VPNPMEQGNLHVYKLQHADAENLSKVLNELFTKGSTATGD 335 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 AKA +S + DK TN LL+ + ++Q V ++D P QV + A I+ ++ Sbjct: 336 AAKAQAPTVSGGFNFVADKSTNSLLVTAAPEDFAFVDQVVKKLDAPRKQVYVEALIMEVS 395 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTL---------------GSDLSVATATTHVG--- 233 GV +A+ Q G G+ L S V A +G Sbjct: 396 TDKSVSFGVNLNVANKQSGLGDGKYGGLLFASSNPAGYESLYNSSGAFVPPAGGSLGGLA 455 Query: 234 --FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 IG + L ++A + +IIA+P+L+ + A+I PY S Sbjct: 456 FPVKIGEVIYSNLQAMINASKSDNSFNIIATPQLMTLDNEEATITVAENRPYLTSQDVGQ 515 Query: 292 ATS------VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQ 344 +T+ ++K+ ++VTP + + I+LK+ + + + + G + K+ Sbjct: 516 STTDRPYQRFDYKDVGTTLKVTPQINEGDSIKLKVKQETSRIDETVTKETGALQPTTRKR 575 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 ET + ++GET+ L G+ + G VP LGD+P G LF++ DER L VFI Sbjct: 576 VTETTIMCRNGETIVLSGLIGKSRAEGNSKVPGLGDVPVVGWLFKNKSVADERTNLYVFI 635 Query: 405 TPRL 408 TPR+ Sbjct: 636 TPRI 639 Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 66/160 (41%), Gaps = 5/160 (3%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQALQTVVKS 77 + +++ D V + ++ +++ N V+ V G V++ L+ + ++V++ Sbjct: 63 KTISINFDGVDLRAFIKYISQVTGKNFVIDDAVKGNVTVISPKPLSPAEVYKVFESVLEV 122 Query: 78 AGLITRQEGNILSVHSIAW-QNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 G N + + + ++ + + + + + LQ AGEL K Sbjct: 123 NGYTALPTENFVKIVPAKTSRARSMPVIDGRETVTNPADAVVTQILPLQNIRAGELRKTL 182 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 L+S G + TN L++ D + + + V Q+DL Sbjct: 183 APLVSPDGMLADFADTNALIVTDYRPNIQRIIGIVDQLDL 222 Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 50/125 (40%), Gaps = 16/125 (12%) Query: 122 ITLQYADAGELAKAGEKLLS----------AKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 L++A A ++++ EKLLS K S+ ++RTN +++ ++ ++ + Sbjct: 232 FHLKHASAAKISQKLEKLLSQSAAKEGGGQTKISVVPEERTNAVIVLAEPQYVAQVKGLL 291 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTH 231 A++D+P + + H+ + L + + T G T Sbjct: 292 AKLDVPNPMEQGNLHVYKLQHADAENL------SKVLNELFTKGSTATGDAAKAQAPTVS 345 Query: 232 VGFNI 236 GFN Sbjct: 346 GGFNF 350 >UniRef50_A3ERG1 Putative general secretion pathway protein D n=2 Tax=Leptospirillum sp. Group II RepID=A3ERG1_9BACT Length = 555 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 90/441 (20%), Positives = 184/441 (41%), Gaps = 51/441 (11%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS-LHLTDVPWKQALQT---VVK 76 PQ V+L +V ++ +++ +++ + N+V+ V G V+ L V +A + ++ Sbjct: 60 PQTVSLNFRNVDISVMVKFMSDLLEKNIVMDERVKGKVTILSPRPVTIPEAFRVFVQALR 119 Query: 77 SAGLITRQEGNILSVHSI--AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 G T ++ ++ + A + + E A++ N ++ + + Sbjct: 120 MKGFETVEKKGMIFIVPQNQAPMDRELFLYNLENTSAKSVAKTVNSILSKGFT-PQPVGS 178 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + L A + D +N LL+ S ++ + +D G+V + A ++ I+ Sbjct: 179 IRQGGLEAPVQIVPDIPSNSLLVSATMNDYSIIKGLLRSLDRQPGEVYVKASLIEISTDK 238 Query: 195 LRELGVKWTLADAQHAGGVG--------------------QVTTLGSDLSVATAT----- 229 L + V A A + G G TT + VAT Sbjct: 239 LNNIQVNLLGAVATGSNGAGVLGGTNYGMVGDVVNGATGADATTSTTGAPVATGAAGAAQ 298 Query: 230 -------------THVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK 276 T FN G +N + L+AL+ + +++P +LA+ Q A I Sbjct: 299 SLTGLTGLIAGVLTGGSFNYGGVNYPSIGTLLNALQTDSDVKTLSTPEILATDSQKAKIT 358 Query: 277 QGSEIPYQV----SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQ 332 G ++P+ + G + T ++ + + +++TP +L R+RL L + Q Sbjct: 359 VGEDVPFITGQSQTVGGNVMTMIQRQNVGITLDITPHILAHDRVRLNLKQTITALTNASQ 418 Query: 333 QADGEV--LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRH 390 K+ +T + V+SG+T+ +GG+ + + + ++P LG+IP G LF Sbjct: 419 LIGTMAVGPTTTKRSTKTILTVRSGQTVVIGGLISSEKSLNKSTIPWLGEIPVLGYLFSS 478 Query: 391 DGKEDERRELVVFITPRLVSS 411 E +R +L++F+TP ++ + Sbjct: 479 TQNEKKRDDLLIFLTPYIIRN 499 >UniRef50_B2KC06 Type II and III secretion system protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC06_ELUMP Length = 527 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 98/472 (20%), Positives = 190/472 (40%), Gaps = 79/472 (16%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDV-SGTVSLHLTDVPWKQALQTV 74 + +KV++ V VP+A L +++ Q K+N ++S + + V+ L ++ ++AL T+ Sbjct: 59 ANSPLDRKVSIRVASVPIATFLNSISAQAKINFIMSEEFANKKVTASLNNITVREALDTL 118 Query: 75 VKSAGLITRQEGN---ILSVHSIAWQNNNIAR--------QEAEQARAQANLPLENRSIT 123 ++ GL ++ G + + N I + + + N P + + Sbjct: 119 LRVQGLTYQRIGKSDSYVVTKRSSDSPNTITKVYTLNYISLQGSNSTGNTNSPQSTFASS 178 Query: 124 LQ-----------------------YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN 160 L A + + ++S++G + +D RTN+L++ D Sbjct: 179 LNVNPNEQRSDMENLAEMVTDSARKGATGSDFLTIIQSVMSSQGKIAIDPRTNKLIVTDI 238 Query: 161 KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLG 220 LE +A++D+ QV + A I+ +N+ S E+G+ + D G + Sbjct: 239 PEIFPQLENILAELDIKPPQVLIEAQIIEVNKSSGLEIGLSYGGTDGTIFKFTGPARGVD 298 Query: 221 SDLSVATATTHVGFNI--------------------------------GRINGRLLDLEL 248 D + G+ ++ + L Sbjct: 299 IDYVKGNGVSGWGYIFPPAGTGTGGSSGGDSGGGSTDGSGGNSNSPKDAFLDFSSFSIVL 358 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT--------SVEFKEA 300 +L + + + P+++ + QPA I+ + +S SG T + E K Sbjct: 359 KSLLTRGEAKYLGKPKVVTINNQPAVIESTRDAAVGFASNLSGNTGSTNVVSQTAERKTV 418 Query: 301 VLGMEVTPTVLQKGRIRLKLHIS-QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 L ++VTP V ++G I L + S +V + + L + T V VK+G+T+ Sbjct: 419 GLTLKVTPQVNKEGYITLLIEPSYSSVANSAVSDGTKDTL---NRSASTLVRVKNGQTVV 475 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 LGG+ + + VPLLGDIP G LF E ++V+F+TP +++ Sbjct: 476 LGGLLSSREILEDRKVPLLGDIPLIGWLFTQRSTTKETTDMVIFVTPTILAD 527 >UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 Tax=Acinetobacter RepID=B2I1Y0_ACIBC Length = 758 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 133/304 (43%), Gaps = 30/304 (9%) Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 S+ D N L+++ + + +E + Q+D+ QV + A I+ ++ Sbjct: 350 ITSFNQNGVSIIADNAQNSLVVKADPQLMREIESAIQQLDVRRQQVLIEAAIIEVSGDDA 409 Query: 196 RELGVKWTLADAQHAGGVGQVTTLGSDLSVATAT----------------------THVG 233 +LG++W L D G+ + +G+ LS A +G Sbjct: 410 DQLGIQWALGDLSSGIGLLSFSNVGASLSSIAAGYLSGGSAGAASAIANGANKGNGATLG 469 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 + + + AL+ + +++++P ++ + A I G +P+ S + +T Sbjct: 470 LGNFDNSRKAYGALIQALKTNTKSNLLSTPSIVTMDNEEAYIVVGQNVPFVTGSVTTNST 529 Query: 294 ------SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIE 347 +VE K+ + ++V P + + G +RL++ + QA L K+ I+ Sbjct: 530 GINPYTTVERKDVGVTLKVVPHIGEGGTVRLEVEQEVSAVQDSRGQAAD--LVTSKRAIK 587 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 T V + G+T+ LGG+ + + +P L IP+ G+LFR D + + +R L+VFI P Sbjct: 588 TAVLAEHGQTVVLGGLVSDDTSLSRQGIPGLSSIPYVGRLFRSDNRSNVKRNLLVFIHPT 647 Query: 408 LVSS 411 +V Sbjct: 648 IVGD 651 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 8/164 (4%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWK-----QAL 71 +A Q + + D + + +A+ N V P V G V++ +++ P Sbjct: 25 SSAYAQTWKINLRDADLTAFINEVADITGKNFAVDPRVRGNVTV-ISNKPLNKDEVYDLF 83 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 V+ G++ GN + + + N+ + + R I L+ + + Sbjct: 84 LGVLNVNGVVAIPSGNTIKLVPDSNVKNSGI--PYDSRNRVRGDQIVTRVIWLENTNPND 141 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 L A L+ M TN L++ D + LE + +D Sbjct: 142 LIPALRPLMPQFAHMAAIAGTNALIVSDRAANIYQLENIIRNLD 185 >UniRef50_B8CZ92 Type II and III secretion system protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ92_HALOH Length = 602 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 80/392 (20%), Positives = 162/392 (41%), Gaps = 30/392 (7%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 +V++ V + VL+ LA L++V+ V V L L D+ +A++ ++ Sbjct: 215 DNRVSMDVSQANLGDVLRTLARLGDLDMVLFGGVRDIVDLKLEDISLDEAIEIILAGTRY 274 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 R+ + + + ++L + I ++Y + ++ + Sbjct: 275 TYRKVDGVYLIGDKNINS------------PASDLLTTSELIPMEYIEVEKVPQLLPNNF 322 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 A ++ V K N LL+ ++ ++ L++++ Q+D + + + A +V + Sbjct: 323 PAA-NVKVLKEKNALLVTGTQSDINKLKEYIKQIDTRIPLIVVEAVVVELTRNRQE---- 377 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDII 260 +G +L T+ + + L++ AL + L + Sbjct: 378 -------NPVIKLGMEYDGEEELLFDTSMGKLTYKSVLDLPDDFYLKIEALVTEGLLTVK 430 Query: 261 ASPRLLASHLQPASIKQGSEIPYQVSSGE---SGATSVEFKEAVLGMEVTPTVLQKGRIR 317 A P + + Q A I G+ Y+V + + T + A + + VTP V G I Sbjct: 431 ARPNITTLNGQQAMIDVGTVQYYKVKQTDGEGNEETQYQSINAGVSLTVTPWVSSSGEIT 490 Query: 318 LKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 LKL + G + + ++E++T V VK G+T+ +GG+ + VP Sbjct: 491 LKLRPQVSNIGAAAAEG---PPQVSRREVDTTVRVKDGQTVVIGGLIQDVGTNTTSKVPF 547 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 L +IP G+LF+ + EL++FITPR++ Sbjct: 548 LANIPLIGKLFKSRNNNVNQTELIIFITPRVL 579 Score = 64.8 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 59/140 (42%) Query: 7 ALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVP 66 AL ++LI + + V + V + VL L EQ +NLV V G V+++L DV Sbjct: 28 ALTVLLIVTSTVSAEELVDVTVRGADIRDVLLMLTEQSGINLVPDETVQGEVTINLRDVD 87 Query: 67 WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 ++AL+T+ + G + + + S + + + R++ + Sbjct: 88 LQEALKTLTMAYGYHFEKVSENVYLVSRDKLEAPVDVRVKDGFLTVHATNANLRTLLREI 147 Query: 127 ADAGELAKAGEKLLSAKGSM 146 AD + + +S K S+ Sbjct: 148 ADKASINIVMDDSVSGKISI 167 Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 37/77 (48%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 +T+ + + +L+ +A++ +N+V+ VSG +S+ L ++P + L ++ G Sbjct: 131 LTVHATNANLRTLLREIADKASINIVMDDSVSGKISIDLENIPLEVGLINLLHVNGFSLS 190 Query: 84 QEGNILSVHSIAWQNNN 100 + ++ + N Sbjct: 191 KSNSVYRIFKADNNTGN 207 >UniRef50_C6XJ47 General secretion pathway protein D n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJ47_HIRBI Length = 660 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 101/460 (21%), Positives = 192/460 (41%), Gaps = 73/460 (15%) Query: 15 GVQAAKPQKVTLMVDD--VPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 G A + TL+V D +++V + +A+ + D S T+++ LT++ + Sbjct: 167 GQLTASGESNTLIVVDYAANISRVRKVVAQ-------IDEDQSETLTIALTNMSATEMAN 219 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQE----AEQARAQANLPLENR-------S 121 TV G ++ ++ N+ I + + AE NL + NR Sbjct: 220 TVNSMKSTGRGSAGFKVTATAVESNNSLIVKGDIKDVAEVHEIVRNLDVANREDDASLKV 279 Query: 122 ITLQYADAGELAKAGEKL-------------LSAKGSMTVDKRTNRLLLRDNKTALSALE 168 ++L++++A ++A E + S+ + + + TN L++ + L LE Sbjct: 280 LSLKHSEAKDIAPILEMMGQRLAEQARPGANASSVPKIAIYEPTNSLVVSASPMVLRQLE 339 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD----LS 224 + V ++D QV + A IV +++ + RELG+++ L+ + + T LS Sbjct: 340 RVVEELDQRRSQVLVEAIIVELSDNAARELGLEFVLSGSGSSATPFAATNFTRSTTNVLS 399 Query: 225 VATATTHVGFNIG----------------------------RINGRLLDLELSALEQKQQ 256 +A A +G +G + ++A++ Sbjct: 400 LAGALALDSDTVGEETVSSLRSAAISSLLGSAGGLLGIGGQSSDGTIFGAIINAVDSDIT 459 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQV-----SSGESGATSVEFKEAVLGMEVTPTVL 311 +++++P LL + ASI G E+P ++ + +VE K + +EV P + Sbjct: 460 SNVLSTPHLLTMDNEKASITVGQEVPITTGEALGTNNSNPFRTVERKPLGVTLEVEPQIG 519 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 + I+L L + + DG + +EI T + GE + LGG+ + Sbjct: 520 EGDSIKLNLRQEVS---SIFDSIDGTDFITNNREINTTILADDGEIVVLGGLIQEEETLN 576 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VPLLGDIP G+LF +G +R L+VF+ P +V Sbjct: 577 ISKVPLLGDIPGVGRLFSSEGTTKKRTNLMVFLKPTIVRD 616 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 11/156 (7%) Query: 26 LMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTVVKSAGLI 81 + + DV ++ ++ ++ VV P V G VS+ LT+ Q + ++ G Sbjct: 48 MNLKDVDISVLIDDVSAITGHTFVVHPSVRGRVSVSSQTPLTNREVFQVFLSTLRVHGFT 107 Query: 82 T-RQEGNILSVHSIAWQNNNIARQEAEQARAQANLP-LENRSITLQYADAGELAKAGEKL 139 G + + A EA AR E I L+ DA E AK + + Sbjct: 108 AIPSRGGVYKIVP-----EQSASAEAGLARPSVGGDQFETAVIRLRNFDATEAAKMIKPI 162 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + +G +T +N L++ D +S + + VAQ+D Sbjct: 163 TNPQGQLTASGESNTLIVVDYAANISRVRKVVAQID 198 >UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6E1_9BACT Length = 668 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 94/420 (22%), Positives = 185/420 (44%), Gaps = 26/420 (6%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 M++ + + + +P + A K + V + + L K + V G Sbjct: 242 MEKLLTIIKIFDVPFL-AGKAMRF-YEFKYVDARNMSKDLGSLAKS---LGAKVGG--DG 294 Query: 61 HLTDVPWKQA--LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 VP+ L + K L+ + + I ++ Q + R + + Q + Sbjct: 295 EFDFVPFSDTNKLIVITKLPELLPKIDMWIKNIDVPPTQLDEEMRVYIYKVQHQKAETIV 354 Query: 119 NRSITLQYAD--AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 IT Y++ A + K G ++ + + D TN ++++ + +++ + +D Sbjct: 355 P-IITQMYSEKMAAQPKKLGRDIVESM-KVLADTETNSVIMKTFPSDYKSIKAIIEAIDA 412 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI 236 QV + IV + + G +W + G QV +G D++ A V F Sbjct: 413 TPQQVFIEVLIVEVTRNDTLDYGTEWLWS-----GSNLQVYGVG-DIARAAGNAAVQFTN 466 Query: 237 GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS-- 294 G ++ + L I+++P +L QPASI+ G E+P SSG+ T+ Sbjct: 467 TFAKGS-FEILIDILATSSNAKILSAPHILVRDEQPASIQVGEEVPILTSSGQQTGTTIT 525 Query: 295 ---VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 V++++ + + VTP + + G I L+++ + ++ + ++++T + Sbjct: 526 FEQVQYRDTGIILTVTPHIAENGLITLEVNQEVSN-AKLTDTGVEKSPTFSTRQVQTSLV 584 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +KSG T+ LGGI +KN+ +PLLGDIP+ G LF+ D+R EL++ ITP + ++ Sbjct: 585 IKSGHTIGLGGIIEQKNEKEVKKIPLLGDIPYLGNLFKATSLIDKRTELIMLITPYIANN 644 Score = 80.3 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 73/173 (42%), Gaps = 5/173 (2%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTDVPWK 68 L + + L DD + V+Q L E +N V+ V G V+LH + +K Sbjct: 83 PALYKPAYTGEKIDIALNFDDAEIKDVVQVILGEILNVNYVLDKRVGGKVNLHASGEVYK 142 Query: 69 Q----ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITL 124 + L +++ ++GN+ +V A + + + + + + L Sbjct: 143 EELISMLNSLLYVYNFTILKDGNLYNVLPQAEARRETSIIIHGDKIPEWSKDIIIQIVPL 202 Query: 125 QYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 +YAD +L+ ++ +S+ G++ + L++ DN + + L + D+P Sbjct: 203 KYADPKKLSSTVKQFMSSIGNIVTHEDFPYLMIIDNASVMEKLLTIIKIFDVP 255 >UniRef50_A6FG34 Putative MSHA biogenesis protein MshL n=1 Tax=Moritella sp. PE36 RepID=A6FG34_9GAMM Length = 532 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 85/435 (19%), Positives = 173/435 (39%), Gaps = 52/435 (11%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 ++ + V Q +L + K NL VSPDVSG +++ L DV + + V G Sbjct: 75 RMDISAKSVTARQFFGSLLKGTKYNLTVSPDVSGRITVVLNDVTIAETMDAVADMYGYDI 134 Query: 83 RQEGNILSVHSIAWQNNNI-----------------------------ARQEAEQARAQA 113 +++GN V+ + I + + + + + + Sbjct: 135 KRQGNTYRVNGAGVRTEIIPMNYLLMKRNGLSNSSISSGYLTDNSSSSSSSDNDSSSSSS 194 Query: 114 NLPLENRSITLQYADAG---ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQW 170 + T D E + + + + + ++ + ++ + Sbjct: 195 SSSTGTEISTQTNTDYWAELEYTLLALTANQEETQVIISPQAGLVTVQGYPKDIRKIKDF 254 Query: 171 VAQMDL-PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATAT 229 +A+ + QV L I+ + + G+ W + ++ A ++ +A+ Sbjct: 255 LAKSEQHLQRQVLLEVKIMEVTLNDGYKQGIDWNVNNSNVAADSSFNFSITDITDLAS-- 312 Query: 230 THVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 G + + G +S L+ + +++++SPR+ A + Q A IK GS+ + Sbjct: 313 ---GAGVFTLAGNDFSAAISLLKTQGDVNVLSSPRVTALNNQKAVIKVGSDEYFVTGYSS 369 Query: 290 SGA---------TSVEFKEA--VLGMEVTPTVLQKGRIRLKLH---ISQNVPGQVLQQAD 335 + + VE + ++VTP + G + L +H I +++ + Sbjct: 370 TKSTSSDDDSIEQDVELTPFFSGIALDVTPQIDSDGGVLLHVHPSIIEVTDSNKIVAGIE 429 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 + D +E +T V+ KSGE + +GG+ NK VP LGDIPW G+LF + + Sbjct: 430 LPLAKSDVRETDTVVKAKSGEIIVIGGLMKTANKDLVSKVPFLGDIPWLGELFTYRSQSV 489 Query: 396 ERRELVVFITPRLVS 410 ++ EL++ I P +V Sbjct: 490 QKTELIILIKPIVVD 504 >UniRef50_Q2JVP0 Putative type IV pilus secretin PilQ n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JVP0_SYNJA Length = 723 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 110/451 (24%), Positives = 186/451 (41%), Gaps = 59/451 (13%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG-TVSLHLTDVPWKQALQ 72 P V K+TL + D PV VL L + LN+V++ T+SL + D P ++ Sbjct: 279 PPVDLGSNAKITLTLRDAPVGDVLSLLVRRAGLNVVLNDVPPDLTISLDVADSPLQETFN 338 Query: 73 TVVKSAGLITRQEGNILSVHSI----------AWQNNNIARQEAEQ-------------- 108 +++ L + G + + + ++ N + +E EQ Sbjct: 339 FILRLKELQATRVGQTVFIGTTLPGVGQQIVKTYRLNQLRIEETEQTFVFNASGTAGGGG 398 Query: 109 -----ARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTA 163 AR + P E RS L +A + L+ + ++ D RTN L + T Sbjct: 399 TVEIDARQLSITPSEIRSRILAILEASNIP------LAQESAIQADPRTNSLTIVATPTQ 452 Query: 164 LSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGS-- 221 + ++AQ+DL QV +SA + IN + LGV A A G G T G Sbjct: 453 HDVIAAYLAQIDLRSRQVLISARFIEINLDNNSSLGVALGSASGNFALGSGDNTVFGGTP 512 Query: 222 -------------DLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLAS 268 A + FN + L + A I+A P+++ + Sbjct: 513 LDQPAGSSVPNVGSFPAAGTGGSLVFNTLNRLQQSLAARIDAAIASGTAKILADPKVVVA 572 Query: 269 HLQPASIKQGSEIPYQ---VSSGESGATSVEFKEAVLGMEVTPT---VLQKGRIRLKLHI 322 + A+I G E+ + +G ++V F++ G+ + + G I L L Sbjct: 573 NNTGAAIVVGQEVITNRRLQTDPATGISTVVFEKGNAGVNLLIQNVRIDDNGYITLNLLP 632 Query: 323 SQNVPGQVLQQADGEVLAI-DKQEIET-QVEVKSGETLALGGIFTRKNKSGQDSVPLLGD 380 + G + +DG V+++ +++ + T Q +K ETL LGG+ +++ D VPLL + Sbjct: 633 QISSIGSQITLSDGTVISLLNQRSVGTLQTRLKDRETLFLGGLIQEEDRVSVDKVPLLSE 692 Query: 381 IPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 IP G LFR + R E+VV ITP ++ Sbjct: 693 IPLLGSLFRRQNTTNTRSEVVVLITPVILED 723 >UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Proteobacteria RepID=A9IRR4_BORPD Length = 862 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 137/292 (46%), Gaps = 26/292 (8%) Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW-- 202 ++ D TN L++ + +L + + Q+D QV + + IV ++++ E G++W Sbjct: 384 TVQADPSTNTLIISAPEPLYRSLREVIDQLDQRRAQVLVESLIVEVSQEKAAEFGIQWMT 443 Query: 203 TLADAQHAGGVGQVTTLGSDLSVATATTHV------GFNIGRINGRL---------LDLE 247 +G +G GS + A G +G + G + L++ Sbjct: 444 GAGSLDGSGFIGGTNLGGSGIGSAGTGATTLDALGRGLTLGLVKGTVDVLGNQVINLNVL 503 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV----SSGESGAT----SVEFKE 299 AL+ + +I+++P LL +PASI G +P+ +SG +G+ ++E ++ Sbjct: 504 ARALQNSGEANILSTPNLLTLDNEPASILVGKTVPFVTGQYVTSGSAGSNNPFQTIERED 563 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 L + + P + + G ++L ++ + + ++ L +K+ I+T V V G+ + Sbjct: 564 IGLKLNIRPQISEGGAVKLDIYQEVSSIDEA-SSSETTGLVTNKRAIDTSVLVDDGQIIV 622 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 LGG+ + S +VP L IP G LFR+D ++ + L+VF+ P +V Sbjct: 623 LGGLLEDRVTSTTSAVPGLSSIPLLGALFRYDKRQRTKSNLMVFLRPFVVRD 674 Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 77/204 (37%), Gaps = 22/204 (10%) Query: 14 PGVQAAKP--QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-HLTDVPWKQA 70 P + A+P Q V+L D + VL+AL+ + N +V P V G ++L V A Sbjct: 24 PALAQARPADQHVSLNFVDTDIPAVLRALSLFTQRNYLVDPRVKGKLTLVSERPVDRDTA 83 Query: 71 LQTV---VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQAN------------- 114 L + ++ G + + V A + A+ AR A Sbjct: 84 LTMLAGALRMQGFAIVEVDGVTRVVPEADAKLQGSAVVADAARGAAGPMPMADFARGARG 143 Query: 115 LPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 + R +L+Y +A L L+ + N L++ D L + + +A++ Sbjct: 144 SEVVTRVFSLKYENAANLLPVLRPLVPPNNPINAYPGNNTLVVTDYADNLERIARVIAKV 203 Query: 175 DLPVGQVELSAHIVTINEKSLREL 198 D+P + +V + +L Sbjct: 204 DVPSA---IDTDVVPVKYGVASDL 224 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 8/90 (8%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG-------SM 146 + +N+ R A+ ++ + ++Y A +LA +LL A+G +M Sbjct: 186 VTDYADNLERIARVIAKVDVPSAIDTDVVPVKYGVASDLASLATQLLDAQGGDTAQRIAM 245 Query: 147 TVDKRTNRLLLR-DNKTALSALEQWVAQMD 175 D RTN +L+R + + ++D Sbjct: 246 VADPRTNSVLVRAGSPARTRLARDLIRKLD 275 >UniRef50_A4BES0 Type II secretory pathway, component PulD n=1 Tax=Reinekea blandensis MED297 RepID=A4BES0_9GAMM Length = 653 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 84/365 (23%), Positives = 153/365 (41%), Gaps = 46/365 (12%) Query: 92 HSIAWQNNNIARQEAEQARAQANLPLEN----RSITLQYADAGELAKAGEKLLSA----- 142 + I + ARQ+ + + + P + + I L ADA ++A+ + + S Sbjct: 239 NRIIVKGETEARQQIIELIQKLDTPSQENASYKVIFLNNADAVKMAEILKGIASTSQGAS 298 Query: 143 --------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 S+ D+ N L++R + + LE ++Q+D+P QV + A IV + Sbjct: 299 GQNEPPSQPISVLADEEQNALIVRAEPSDMKELESIISQLDIPREQVLIEAAIVEVTGND 358 Query: 195 LRELGVKW-----------------------TLADAQHAGGVGQVTTLGSDLSVAT---A 228 LGV+W ++ + + G G GS L T A Sbjct: 359 TDTLGVQWATNPEVVQDGVPFLSVSSEVAGASVGNLAQSVGQGISQAGGSPLGALTSVPA 418 Query: 229 TTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV--S 286 T +G N + + ALE + +++P +L A I G+ +P++ S Sbjct: 419 GTFMGLADPFGNRVDFGVAIQALESASNTNFLSTPSILTLDNSEAVITVGNSVPFKTGGS 478 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 E ++E ++ + V P + Q G IRL++ + + +V+ K+++ Sbjct: 479 GDEDNPFTIERQDVGTTLTVIPHIQQNGTIRLEVDQIVESVDETVSYDASDVVT-KKRQV 537 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 TQV V SGET+ LGG+ + + VP+LG IP G LF+ + L++ + P Sbjct: 538 TTQVLVNSGETIVLGGLIQDQVSELESRVPVLGYIPIIGHLFKSKSTLKTKTNLLIILKP 597 Query: 407 RLVSS 411 ++ Sbjct: 598 SVIED 602 Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 7/189 (3%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 + I A L+L A Q TL + + + +V+ +A+ ++ P V G V++ Sbjct: 7 FRNVILACCLLLTTVSVFADDQTYTLNMQEADITEVIDLVAKVTGRTFIIDPRVRGKVTV 66 Query: 61 ----HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 +T + ++ G Q G++ + + + E + R Sbjct: 67 ISDKEMTKSQIYETFLATLEVYGFSAVQAGDVTKIIGQSDIKSAGIEVETQGGRVGEE-- 124 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + R +Q A A EL +++ G + N L++ D T + L + V +D Sbjct: 125 IITRVFPIQNASAMELVPILRPMVANYGHLAGVPSANVLIVADRATNIDRLSEIVYLLDK 184 Query: 177 PVGQVELSA 185 + E+ Sbjct: 185 AGSE-EIEV 192 >UniRef50_B3R7X2 General Secretory Pathway protein D, type II secretion system n=16 Tax=cellular organisms RepID=B3R7X2_CUPTR Length = 831 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 123/300 (41%), Gaps = 35/300 (11%) Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 + D TN L++ ++ L + +D QV + + IV + ELG++W Sbjct: 411 IQADPSTNSLIITASEPVYRNLRGVIDDLDARRAQVYIESMIVEVTATQASELGIQWQGL 470 Query: 206 DAQHAG----------GVGQVTTLGSDLSVATATTH---------------VGFNIGRIN 240 + +G G G L L+ A A ++ G N+G +N Sbjct: 471 ISSSSGNNNVFAGTNFGTGGQNILNLTLAGALADSNRSAGIVAAQQLVPDIGGLNLGIVN 530 Query: 241 -GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA------- 292 L L AL ++++++P L+ + A I G IP S Sbjct: 531 RAMGLGALLRALGTNGSVNLLSTPNLITLENEEAKILIGQNIPITTGSYAQTGGAASVTP 590 Query: 293 -TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 + + K+ + + V P + G +++++ + Q + + + IET V Sbjct: 591 FQTFDRKDVGITLRVKPQITDGGLVKMQIFQESSNVVQATANL-IQGPTTNVRSIETNVL 649 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 V G+ + LGG+ G VPLLGDIPW G LFR++ K + L+VF+ P ++ + Sbjct: 650 VDDGQIIVLGGLIEDNYGDGVQKVPLLGDIPWIGGLFRYENKNRSKTNLLVFLRPYVMRT 709 Score = 91.8 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 5/168 (2%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQ 72 P V A +V L + + V++A+ + N V+ P V GTV+L V QALQ Sbjct: 53 PDVTPANRDQVVLNFVNADLDSVIKAVGQATGKNFVIDPRVKGTVNLVTEQPVSRAQALQ 112 Query: 73 T---VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 T V++ G + V A + + ++ + + + L Y A Sbjct: 113 TLGSVLRMQGYAMVESNGFTKVVPEADAKLQGSPTVIGGSPSRGDQ-VVTQVFRLNYESA 171 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 L +++ ++T N L++ D L + + +A +D P Sbjct: 172 NNLVPVLRPMIAPNNTITAYPANNTLVITDYADNLRRIARIIAAVDAP 219 Score = 42.5 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 19/103 (18%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL------------- 140 I +N+ R A A E + L++A A + A ++LL Sbjct: 199 ITDYADNLRRIARIIAAVDAPASGEVELVPLKHALASDTAGVLQRLLDPAAAGAAGGGGA 258 Query: 141 -----SAKGSMTVDKRTNRLLLRDN-KTALSALEQWVAQMDLP 177 S + S+ + R+N L++R + L Q + ++D P Sbjct: 259 AAVDASLRTSVVAEPRSNSLMIRATSRARLQQARQLIEKLDQP 301 >UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Comamonadaceae RepID=A1TUQ3_ACIAC Length = 829 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 15/286 (5%) Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVK 201 + D+ N +L+ K +E + ++DLP QV + A IV + + G++ Sbjct: 499 GGVRLMADELNNSVLVWGTKANYMKIEATLKRLDLPPTQVLIEASIVEVTLDDTLQYGLQ 558 Query: 202 WTLADA--QHAGGVGQVTTLGSD-----LSVATATTHVGFNIGRING-RLLDLELSALEQ 253 W +A + G GQ+ T G S T GF+ N + + L+AL Sbjct: 559 WAFNNAGPSNLNGAGQLLTNGPSDKTPIGSSIPTPTSSGFSYALSNSLGSVRVVLNALAT 618 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS-------GESGATSVEFKEAVLGMEV 306 K+ L +I+SP L+ A + G++ P + S G S A ++++++ + + V Sbjct: 619 KRLLKVISSPSLMVLDNHTAMMSVGNQQPVKTGSLITSVSGGNSVADTIQYRDTGVSLAV 678 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 TP+V + +++ + + +++I ++V V+SGE + LGG+ Sbjct: 679 TPSVNAGNLVTMQIDQAVTDAVADNSGSISLQPVFQQRQITSKVAVRSGEAIVLGGLIRD 738 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + S + VPLL DIP G LF ++GK R EL+V ITP++V ++ Sbjct: 739 TSNSSKSGVPLLQDIPLVGSLFSNNGKTGNRTELLVVITPKVVRTD 784 Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 8/161 (4%) Query: 23 KVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQA---LQTVVKS 77 +T ++ PVA+V++ L + K N V+ P ++GTV+L + +P QA L++ +++ Sbjct: 96 PMTFSFEEAPVAEVVRTVLGDIAKANYVLHPPLNGTVTLATRNPIPPDQAMFLLESALQA 155 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR--SITLQYADAGELAKA 135 GL ++ I Q R+ LP N I LQY A E+A Sbjct: 156 NGLGMIRDARGTYHVGRPDALRAIG-GTLRQFRSGEPLPPGNGAVIIPLQYIGAAEMASI 214 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 +++ + VD N L++ +T A V D+ Sbjct: 215 LRPMVTPDAIVRVDNLRNVLVMSGTRTQAEAWMDLVNTFDV 255 >UniRef50_C5S7Y5 General secretion pathway protein D n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7Y5_CHRVI Length = 733 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 12/292 (4%) Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 + A + E +S+ ++ D N LL+R + + + Q+D+ QV + A IV I Sbjct: 423 QSASSHELEMSSSVNIVADAVNNSLLVRASPRDYKKILDALKQLDILPLQVLVEATIVEI 482 Query: 191 NEKSLRELGVKWTLADAQHAGGVGQV--TTLGSDLSVATATTHVGFNIGRI-NGRLLDLE 247 + GV+W L G T + T GFN + N + Sbjct: 483 TLSGSLKYGVQWELFGPGADGKSFASLDGTFDDAETSGIGTMFPGFNWAMVSNPDTIKAT 542 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS------VEFKEAV 301 LSAL L++++SP ++ Q A I+ G E+P S + +T+ + +K+ Sbjct: 543 LSALAGDNLLNVLSSPSVMVMDNQTAKIQVGREVPIATSKQDGTSTTDRTYTTISYKDTG 602 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG-EVLAIDKQEIETQVEVKSGETLAL 360 + + V P V G ++L I Q V + A G + K+ I + V V+S + + L Sbjct: 603 VILTVKPRVTPGGLVQL--EIEQEVSTVFEENASGLNSPSFKKRTITSSVAVRSNQAVVL 660 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 GG+ G+ +P L +P G LF K R ELVV +TP++++++ Sbjct: 661 GGLIEDTRSDGKQGIPGLYSLPVVGGLFGETSKSSTRTELVVVLTPKVIAND 712 Score = 77.2 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 5/168 (2%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLH----LTDVPWK 68 P A P VTL D + +V++ L + K+N V+ P V G SL L Sbjct: 101 PSEVDASPGDVTLNFDGTDIREVVKVILGDLLKVNYVLHPAVQGATSLQTGRPLRREDLL 160 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 L+T+++ Q+G+ V +A + + + + L+Y Sbjct: 161 PTLETLLRMNNAALVQKGDRYEVVPLANAVQGRVTPQLGETDRALPNGYSVQVVPLRYIG 220 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 A E+ L + VD N L++ +S L + D+ Sbjct: 221 AEEMNSILTPLAPEGSVIRVDNLRNLLVIAGTSPEMSNLLDTIRVFDV 268 >UniRef50_A8EVV0 General secretion pathway protein D n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVV0_ARCB4 Length = 478 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 94/430 (21%), Positives = 204/430 (47%), Gaps = 38/430 (8%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV-- 58 MK+ I +LL+ + ++ + D+ V +++ ++ K N++V+ ++ V Sbjct: 1 MKK-IFIVLLLFFYALNLYSNDEININFKDIKVDDLIKITSKITKRNILVTQIINEKVDY 59 Query: 59 --SLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + +T L+T++K G +E +L V + I ++E + Sbjct: 60 IPTQKITKENLFDILETILKEKGYFLVEENGVLKVKKV-----EIIKEEEQF-------- 106 Query: 117 LENRSITLQYADAGELAKAGEKLLSAK-------GSMTVDKRTNRLLLRDNKTALSALEQ 169 I L+ D + K + +++ K +++D +N L++ +K L ++ Sbjct: 107 --TEVIGLKNVDGVNIIKILDDVVNKKYINKTIKPFVSLDLESNSLVVMASKDELKQIKD 164 Query: 170 WVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT-- 227 + ++D QV + A I+ +N + + ++G+ + + +A + + Sbjct: 165 LIQELDKEKAQVYVQAKIIEVNNELVNKIGISYGIINASARSDGINAISSNLNGGSNAIK 224 Query: 228 -ATTHVGFNIGRIN---GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 A +G + +N G L L+ L+Q LDI++ P +LA + +SI G +I Sbjct: 225 EAVDTLGIRMSDVNIKSGLALGASLNLLQQNGALDIVSEPSILAIDNKESSIYVGEKISV 284 Query: 284 QVSS----GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL 339 ++SS G T+ E ++ L ++V P + ++ L+++ + + + G+ Sbjct: 285 EISSTLTDGGLQRTNYEREDIGLTLKVKPRISSDTKLTLEIN-TLLEGIKSTSVSAGQNP 343 Query: 340 AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRE 399 K+EI+T + +GE++ +GG+ KN++ + VP+LGDIP FG+LF++D K +++ Sbjct: 344 DTLKKEIKTAAILNNGESVIIGGLIENKNETIEQKVPVLGDIPLFGELFKNDSKMNKKNN 403 Query: 400 LVVFITPRLV 409 LV+ +TP ++ Sbjct: 404 LVIIVTPYMI 413 >UniRef50_A8GJQ5 General secretion pathway protein D n=6 Tax=Enterobacteriaceae RepID=A8GJQ5_SERP5 Length = 660 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 81/396 (20%), Positives = 155/396 (39%), Gaps = 38/396 (9%) Query: 53 DVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNIL-----------SVHSIAWQNNNI 101 + +G VS+ L + V R + L + IA + + Sbjct: 206 EQAGVVSVALQHASATDVVSIVTTLFRDENRTKKGALPGMKVVADERTNTVLIAGEPSLQ 265 Query: 102 ARQEA--EQARAQANLPLENRSITLQYADAGELAKAGEKLLS----------------AK 143 AR E +Q + + I L+YA A L + + + Sbjct: 266 ARIEGIIQQLDQEKASQGNTKVIRLKYAKAQGLLEVLSGVSANLQDEKKTVGNNVSVMKN 325 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 + D++TN L++ +S LE+ + Q+D+ QV + A IV + LG++W Sbjct: 326 MVIKADEQTNALIINATPDVMSNLEKVIEQLDIRRAQVLVEAVIVEMQNADGLNLGIQWA 385 Query: 204 L---ADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDII 260 Q Q+ G G +G L L+A+ + Q +I+ Sbjct: 386 NRYGGGTQFGNAQAQIAPGFKGGMTEVFKNANGLVTGFYSGNWAGL-LTAISNQSQNNIL 444 Query: 261 ASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRI 316 A+P ++ + A G ++P Q ++ ++ +V K + ++V P + + + Sbjct: 445 ATPSIMTLDNEDAEFSVGQDVPILTGSQTTNSDNVFNTVARKTVGIKLKVKPQINKGQSV 504 Query: 317 RLKLHISQNVPGQVLQ-QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSV 375 L++ + + D + + + V V+SGET+ +GG+ + + +V Sbjct: 505 LLQIEQEVSSVAENSSVDKDNLGATFNIRTVNNTVLVESGETVVVGGLLDKSQSDSKSAV 564 Query: 376 PLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 P L IP G LFR ++ +R L++FI P ++ S Sbjct: 565 PFLERIPLLGALFRSTSHKESKRNLILFIRPTVIRS 600 Score = 65.2 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 61/179 (34%), Gaps = 10/179 (5%) Query: 5 IAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH--- 61 + A+L+ML+ + + + + + + ++ +++ V G V++ Sbjct: 29 LMAVLVMLLWVSAPVQAEAFSANFKGTDIHEFISTASKALGKTIIIDDAVKGKVTVRSYE 88 Query: 62 -LTDVPWKQALQTVVKSAGLI-TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN 119 L + Q V+ G N+L V A L Sbjct: 89 PLDAGQYYQFFLNVLDVYGYAVISMPNNVLKVIPAKDGKRAALNALNTPAEGDE---LIM 145 Query: 120 RSITLQYADAGELAKAGEKLLSA--KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 R + L A E+A + + G++ + N LL+ +++L + +MD Sbjct: 146 RIVPLNNIAAKEVAPLMRQFNDSIGIGNVVFLESGNALLITGRADVVNSLVELAHEMDR 204 >UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDL7_ACIJO Length = 785 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 75/303 (24%), Positives = 132/303 (43%), Gaps = 29/303 (9%) Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 S S+ D N L+++ + + +E + Q+D QV + A I+ + Sbjct: 340 ITSFNSNGVSIIADSSQNALVVKADPQLMREIESAIQQLDTRRQQVLIEATILEVEGNDA 399 Query: 196 RELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI------------------- 236 +LGV+W + D G+ +GS L A G Sbjct: 400 DQLGVQWAMGDLSSGVGIINFDNIGSSLKSIAANYLTGGGAGAASAIGAGGSLILGDYKE 459 Query: 237 -GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA--- 292 + +L + AL+ + +++++P ++ + A I G +P+ S + + Sbjct: 460 GSDGSRQLYGAMIQALKSNTKSNLLSTPSIVTMDNEEAYIVVGENVPFVTGSVSTTSSGT 519 Query: 293 ----TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 T++E K+ + ++V P + + G IRL I Q V + + L K+ I+T Sbjct: 520 ANPYTTIERKDVGVTLKVVPHIGEGGTIRL--EIEQEVSDVKANKGQAQDLVTSKRAIKT 577 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 V + G T+ LGG+ + + S+P LG IP G+LFR DGK D++R L+VFI P + Sbjct: 578 SVLAEHGNTIVLGGLISDNTSYSRQSIPGLGAIPGLGRLFRSDGKSDQKRNLLVFIHPTI 637 Query: 409 VSS 411 V Sbjct: 638 VGD 640 Score = 71.8 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 6/177 (3%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-- 60 + +L A+ Q + + D + + +A+ N V P V G V++ Sbjct: 10 WALTIAAPLLAMVSTASYAQTWKINLRDADLTAFINEVADITGKNFAVDPRVRGNVTVIS 69 Query: 61 --HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 L V+ G++ G + + + ++ + + Sbjct: 70 NKALNKQEVYDLFLGVLNVNGVVAIPSGRTIKIVPDSNVKSSGIPYDVRHRATGDQ--VV 127 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 R I L+ +A +L A L+ ++ TN L++ D + + LE + +D Sbjct: 128 TRVIWLENTNANDLIPALRPLMPQFAHLSAVNGTNALIVSDRASNIYQLETIIRNLD 184 >UniRef50_Q0AIN2 Type II and III secretion system protein n=3 Tax=Nitrosomonas RepID=Q0AIN2_NITEC Length = 767 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 81/408 (19%), Positives = 167/408 (40%), Gaps = 23/408 (5%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQALQ 72 + + + +T+ D + + + ++ +N V +V T S+ + D + L+ Sbjct: 179 SLISEFSKPITMEFRDTSLKAIFELISRTAGINFVFDRNVQQEATASMFVRDNSIEDVLK 238 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 ++ + L +L+ +++ + A+Q+ Q L RS + D ++ Sbjct: 239 LLLLTNQLAY----KVLNSNTLLIYPDTPAKQKDYQE-------LVVRSFHVANTDVKQM 287 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 L+ A+ + V+++ N ++RD + +E+ VA D P +V L ++ + Sbjct: 288 VAMIRGLVKAR-DIYVNEKLNLFVIRDTLEMIRLVERLVAINDFPDPEVMLDVVVLEVKR 346 Query: 193 KSLRELGVKWTLA-DAQHAGGVGQVTTLGSDLSVATATT-HVGFNIGRINGRLLDLELSA 250 + ELG + GVG +D V + + GF R ++ Sbjct: 347 DNTLELGPNMPTSVTFSAIPGVGAPAQAAADSVVKMSMIKNAGFEGLRSFTISNQAKIDF 406 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGMEVT 307 D++A+PR+ + A I G++ P + + A S + + L EV Sbjct: 407 GRTLTNADVLANPRIRVKSREKAKIHIGNKEPVFTVTNTANVGSAASATYIDVGLKFEVE 466 Query: 308 PTVLQKGRIRLK--LHISQNVPGQVLQQADG--EVLAIDKQEIETQVEVKSGETLALGGI 363 P V + LK L +S N+ + D + I + ET +E++ GET L G+ Sbjct: 467 PVVRTNNEVTLKALLEVSSNLGEKRSGGGDNAATAIVIGTRTAETVLELRDGETQVLAGL 526 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + L +IP G +F ++ + E+++ ITP ++ + Sbjct: 527 IQDDLSRVKSGIAGLTEIPILGDIFSKQVRKHNKTEIILLITPHIIRN 574 >UniRef50_D2U379 Protein transport protein HofQ n=1 Tax=Arsenophonus nasoniae RepID=D2U379_9ENTR Length = 347 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 137/294 (46%), Positives = 191/294 (64%), Gaps = 8/294 (2%) Query: 121 SITLQYADAGELAKAGEK----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 S LQYA+A LA + LLS KG + DK+TN L+ D + + L+ W+ ++D+ Sbjct: 57 SYPLQYAEAELLASQLSQNNPPLLSKKGKVFADKQTNNLIFEDTQRHIERLQSWLKKIDI 116 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI 236 P QV+++A+I+ + ++L ELG+ W L+ + ++ L ++ H+ FNI Sbjct: 117 PQQQVQITAYIINTSREALYELGIFWELSSDKI--NQVGISRLNIHQPAPSSIPHIAFNI 174 Query: 237 GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 +I LL LELSALEQ+ QL IIASPRL+ASH ASIKQG+EIPY + S + ++ Sbjct: 175 AKIKSHLLSLELSALEQENQLSIIASPRLMASHNHSASIKQGTEIPYIIQS--KNKSQIK 232 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 FKEA+LGMEVTPT+L+ G++RL L ISQN P L + +AI+KQEI TQV + GE Sbjct: 233 FKEAILGMEVTPTILRGGKVRLALKISQNTPNTSLLANTYQHIAINKQEISTQVTINHGE 292 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 TL LGGIF +K + Q +P L DIP+FGQLF DGK+ RELV+FITP+L++ Sbjct: 293 TLILGGIFQQKKNNQQQKIPYLADIPFFGQLFTKDGKQTYHRELVIFITPQLIN 346 >UniRef50_Q7NHU7 Glr2438 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHU7_GLOVI Length = 493 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 99/431 (22%), Positives = 176/431 (40%), Gaps = 38/431 (8%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG-TVSLHLTDVPWKQALQTV 74 V+ ++VTL + D PV +VLQ LA + N++ VS VS+ + V Sbjct: 53 VELGSGERVTLALKDAPVREVLQILARRAGCNVLFGEGVSAQRVSMDVRGETLDDTFNLV 112 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEA----EQARAQANLPLENRSITLQYADAG 130 + L R+ GN + V N R + QA L + + G Sbjct: 113 LHLHNLKARRTGNTILVGGEMAHNLPQTRMRTFRLNQADVQQAAGVLRGLGAQVGSTNLG 172 Query: 131 ELAK----------AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 A L + +TVD RTN L+ + AL + +AQ+D+ Q Sbjct: 173 STQPGAATTNPDPAATSGPLRGELFVTVDARTNSLVAVGSPRALQIAQVQLAQLDVRQRQ 232 Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHA-GGVGQVTTLGSDLSVATATTHVG------ 233 V + +V +N ++ +LG + + G VG LG+ A T G Sbjct: 233 VMIDVKLVDVNLNNVSDLGFRLGGSAGNFQLGTVGGAADLGASYPAAVGLTGGGPGNTLI 292 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHL------QPASIKQGSEIPY---Q 284 FN + L L Q+ ++ASP+LL + A ++ ++ Sbjct: 293 FNTLGALASAMALRLDTAIQEGSARVLASPQLLVASGAGFSKPTAARVEITDDVVVGATI 352 Query: 285 VSSGESGATSVEFK--EAVLGMEV-TPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAI 341 + E+G ++ K + + +E+ V G + + L + + + A G ++ + Sbjct: 353 TTDRETGQSTTTIKVDKVGVSLEIAVYQVDDNGFVDVSLKPQVSSINDIQRDAAGNLVTL 412 Query: 342 DKQE---IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR 398 + I+ ++ ++ GET +GG+ ++ +PLLGD+P G LFR + ERR Sbjct: 413 LTRRNLDIQ-RLRLRDGETFVIGGVIREIDRQLVQKMPLLGDLPVLGALFRFQSNQHERR 471 Query: 399 ELVVFITPRLV 409 E+ + +TP ++ Sbjct: 472 EVALMVTPHIL 482 >UniRef50_Q1N1M8 Type II secretory pathway, component PulD n=1 Tax=Bermanella marisrubri RepID=Q1N1M8_9GAMM Length = 640 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 152/352 (43%), Gaps = 35/352 (9%) Query: 92 HSIAWQNNNIARQEAEQARAQANLPLENR----SITLQYADAGELAKAGEKLLSA----- 142 + + Q AR+ ++ A + P + I LQ+AD+ ELA+ + L+ Sbjct: 249 NRLIIQGEQSARERVKELIATLDRPSKFSGKASVIRLQHADSEELAELLKNLMGDVKDDK 308 Query: 143 -------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 S+ D N L++R + +S +++ V ++D+ QV + A IV + + Sbjct: 309 GKSQAGGSVSIHADTGLNALVVRAEPSVMSEIKEIVTELDVRRAQVLIEAAIVEVTGQVD 368 Query: 196 RELGVKWTLAD----------AQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRL-- 243 +GV+ D A ++ L + ++ G +G + Sbjct: 369 DRVGVQTAALDQETGETPLVATDFANAGTSISQLITGIATGQPAISSGLTLGGVGQNGDT 428 Query: 244 -LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-----TSVEF 297 + ALE +++++P ++ A I G +P+ S S + T+++ Sbjct: 429 EFAFLVQALESVSNANLLSTPSIMTMDNHEAEIIVGQNVPFVTGSTSSTSNSNPFTTIKR 488 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 ++ ++VTP V +RL + S + +++ +K+ I+TQ+ ++GE Sbjct: 489 EDIGTTLKVTPHVQDGKFVRLSVEQSTESVAPTAVEGQADLIT-NKRSIQTQILAENGEI 547 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + LGG+ + + VP LGDIP G LFR + ++ L+VF+ P +V Sbjct: 548 VMLGGLIRDAVQESESKVPFLGDIPIIGWLFRSTSESRVKQNLIVFLKPTVV 599 Score = 77.6 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 9/178 (5%) Query: 4 WIAALLLMLIP-GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHL 62 ALLL+ +P AA + + + D + + +A + V+ P V G V++ + Sbjct: 18 LAIALLLLSMPFQALAADDETWKVNLKDADIKAFITQVANITGYSFVIDPRVKGKVTI-V 76 Query: 63 TDVPWKQ-----ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPL 117 +D P Q Q+V+ G G+I+ + A + + Sbjct: 77 SDTPMTQNEVYEMFQSVLAVHGFSAIPAGHIIKIVQQNDTKQEGG--MPTTVNAPQSEQM 134 Query: 118 ENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + I ++ A +L +++ G + K N L++ D+ + + LE+ + ++D Sbjct: 135 ITQVIQIKDTPALDLVPILRPMVAKYGHLAGVKSANALIVTDHASNVRRLEKIIQRLD 192 >UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified Gammaproteobacteria RepID=A0Z790_9GAMM Length = 696 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 92/423 (21%), Positives = 173/423 (40%), Gaps = 66/423 (15%) Query: 54 VSGTVSLHLTDVPWKQALQTVV----KSAGLITRQEGNILSVH-----SIAWQNNNIARQ 104 + GT + L + +Q + +S G + V S+ + + Q Sbjct: 211 IQGTQVIKLRYAVAEDVVQMLQTLEKQSRGDGAESNDEVTLVADKRTNSVVVTADELNSQ 270 Query: 105 EAEQARAQANLPLE----NRSITLQYADAGELAKAGEKLLS----------------AKG 144 + PLE + + L+YADA E+A+ +++ Sbjct: 271 RILDLVTYLDTPLEQSGNVKVVYLEYADAVEVAEVLTRVMQNMSRLDTGGDRKPSTNTNS 330 Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL 204 ++ D+ TN L++ + +++LE +A++D+ QV + A IV + +ELG++W Sbjct: 331 TIEADEGTNALIITADADEMASLEAVIARLDIRRAQVLVEAIIVEMEITEGQELGLQWIF 390 Query: 205 ADAQHAGGVGQVTTLGS---------------DLSVATATTHVGFNIGRINGRLLD---- 245 AD A G T+ + + + + ++ G L Sbjct: 391 ADDSGAFGSNVSTSSAQQQRNAAIGNALLGDENSNADIGVRDLAGALSQVPGTTLGWGVV 450 Query: 246 -------LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA------ 292 + L+ALE + +I+++P LL Q A I G +P+ S + Sbjct: 451 GDDLSMSVILNALETQGNANILSTPSLLTLDNQEAYITVGQNVPFVTGSYSNTGGASNVQ 510 Query: 293 ---TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 ++E + + ++VTP V + + L + + Q L A + ++++IET+ Sbjct: 511 NPFQTIERENVGITLKVTPQVNEGDSVVLDIVQEVSSISQQLLAAADVI--TNERKIETK 568 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V + G+ + LGG+ + Q VP L DIP G+LFR+D + L+VFI P +V Sbjct: 569 VMAQDGDVVVLGGLVKDDVQDSQQGVPFLQDIPLLGRLFRNDVVSVTKSNLLVFIRPTIV 628 Query: 410 SSE 412 + Sbjct: 629 RDD 631 Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 97/269 (36%), Gaps = 19/269 (7%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV---- 58 I L+ + +Q Q+ T+ + D + ++++ +A+ +VV P V G + Sbjct: 32 WLIMLLVATSLSSIQTVSAQEYTVNLQDTDIQELIKFVADVTGATIVVDPSVKGKIKVVS 91 Query: 59 SLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 S + +++ G + GN++ V ++ + +N Sbjct: 92 SRPVNKSELYDLFLSILDVQGYTAVRTGNVIRVIPNKDARSSPV-EVPSSGAMSSNDEYV 150 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD--- 175 + I L+ A +L L+ + M +N +++ D + + + + + +MD Sbjct: 151 TQVIRLENISAAKLIPVLRPLVPQQAHMAAYAPSNAIIISDIASNIRRIVEIIDRMDRSA 210 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFN 235 + QV + + V+ + + G G + L T V Sbjct: 211 IQGTQV-IKLRYAVAEDV------VQMLQTLEKQSRGDGAESNDEVTLVADKRTNSVVVT 263 Query: 236 IGRING-RLLDLELSA---LEQKQQLDII 260 +N R+LDL LEQ + ++ Sbjct: 264 ADELNSQRILDLVTYLDTPLEQSGNVKVV 292 >UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C127_HYPNA Length = 653 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 99/423 (23%), Positives = 179/423 (42%), Gaps = 61/423 (14%) Query: 50 VSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNI---LSVHSIAWQNNNIARQEA 106 + D + T ++ LT+VP + + + G + Q+G LS + N+ I R +A Sbjct: 181 LDRDQTVTETVPLTNVPAVEIETVLTRLQGDPSAQQGQAPSRLSAVASLTSNSIILRGDA 240 Query: 107 EQARAQANLPLE----------NRSITLQYADAGELAKAGEKLLSAKG------------ 144 + LE R ITL YADA E+ E++ ++ Sbjct: 241 TSVERAKRVALELDATNPQRDHVRVITLNYADAEEVVPILERVANSMAMQRAPSETAPVA 300 Query: 145 -SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 ++ TN L++ N + A+E+ V +D+ QV + A IV +++ + RELG+++ Sbjct: 301 QTIAHHGPTNSLIISANPETILAMERVVTALDVRRPQVMVEAIIVEMSDDAARELGLQFL 360 Query: 204 LADAQHAGGVGQVT--------------------------TLGSDLSVATATTHVGFNIG 237 LA + ++++ T G +G Sbjct: 361 LAGTGGDVPFASTNFSRAAPNLLALTGALVTDAFEDPAAENPFREAAISSLTGSSGLTLG 420 Query: 238 ---RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS-----GE 289 L + L+A+E I+++P + + +++ G EIP Sbjct: 421 FGGTSGDNLFGVILNAVEDDTASRILSTPFGMTLNNATSALIVGQEIPVTTGQVLGEANS 480 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 + +VE K+ + +EVTP + + +RL + + + +++ +DK+EI Sbjct: 481 NPFRTVERKDIGIQLEVTPRIGENDTVRLDIRQEVSSVFGSVGTVTPDLI-LDKREIRAS 539 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V GE + LGG+ + + VP+LGDIP G+LFR +GK RR L+VFI P +V Sbjct: 540 VLADDGEIIVLGGLVEQTDTLRDTKVPVLGDIPGVGRLFRSEGKAATRRNLMVFIRPTIV 599 Query: 410 SSE 412 ++ Sbjct: 600 RNK 602 Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 10/156 (6%) Query: 26 LMVDDVPVAQVLQALAEQEKLNLVVSPDVS-GTVSL----HLTDVPWKQALQTVVKSAGL 80 L ++DV + +++ ++ + PDV VS+ +T Q T ++ G Sbjct: 33 LNLEDVELNTLIEDISMLTGYTFITHPDVRRAKVSVISQTPMTTTELFQVFLTTLRIQGF 92 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 G + A A I L A+A E A+ + LL Sbjct: 93 AAVPAGKDTYRIVPRAIASTEAPMSGPGPNAF-----VTEVIKLDRANAMEAAQMIKPLL 147 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 A+G + + TN L++ D + L + + + +D Sbjct: 148 DAQGQVVANAGTNTLVVVDYASNLERVRRIIETLDR 183 >UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobium loti RepID=Q988A3_RHILO Length = 708 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 131/285 (45%), Gaps = 15/285 (5%) Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 + A ++ D N LL++ +EQ ++++D+ QV L A I + Sbjct: 393 PQQDNQAPAHATVVADVENNALLIQTTARDYQRIEQILSKVDVLPTQVMLEAVIAEVTLN 452 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQ 253 + G++W + G ++ A A T GFN + + L+AL + Sbjct: 453 DDLKYGLRWFFENG------GTKVSVTDVAKAAAAATLPGFNWSYATDN-IQVTLNALSK 505 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT-------SVEFKEAVLGMEV 306 +++I++P ++A + Q A ++ G ++P + SV+ K+ + + V Sbjct: 506 ITDVNVISAPTIMALNNQKAILQVGDQVPILTQQSQDTGNGSAPIINSVQMKDTGVILTV 565 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 TP + GR+ L + + + +D + I +++++T+V V GE+LALGG+ + Sbjct: 566 TPRINNAGRVMLDIQQEVSNVTKT-DSSDIDSPTIQQRKVQTRVLVNDGESLALGGLIQQ 624 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 N + VP+LGDIP G F+ R EL++FI P +V Sbjct: 625 NNSVDRSQVPILGDIPILGNAFKQKDDTIRRTELIIFIRPHVVRD 669 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 66/159 (41%), Gaps = 6/159 (3%) Query: 23 KVTLMVDDVPVAQVLQA-LAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 K L + + P+A +A L + LN +V P V GTV+L + + AL +++SA L Sbjct: 91 KFELNLVNAPIADAAKAVLGDALHLNYIVDPRVQGTVTLQTSQPVSQDALVDILQSA-LA 149 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP----LENRSITLQYADAGELAKAGE 137 G + + + P ++ + + LQ+ A E+ E Sbjct: 150 VNAAGITSRAGTYQIVPLSEIMASTPPVSVPSTSPSGPGVKVQVLQLQFIAADEMKTILE 209 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + + VD N + + + + L+A+ + V+ D+ Sbjct: 210 PITRQGSVLRVDSTRNIITVAGSDSDLNAIREAVSVFDV 248 >UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyphomonadaceae RepID=Q0ASR3_MARMM Length = 650 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 94/432 (21%), Positives = 175/432 (40%), Gaps = 58/432 (13%) Query: 38 QALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQ 97 + +A ++ + D S + LT+V + + + T E + +IA Sbjct: 168 ENIARLRQVIRDLDRDTSVVEMVELTNVSAGDMTRILQQMRTSSTAGEDETIFNVAIAPI 227 Query: 98 N-----------NNIARQEAEQARAQA--NLPLENRSITLQYADAGELAKAGEKLLSA-- 142 + + R A R + R I L +AD L ++++ Sbjct: 228 PASNTVLLRGNRDAVDRMIALVRRVDSVSQSNRSFRVIYLSHADGEHLLPILQQVVDTLV 287 Query: 143 -------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 S++ TN L++ + LE + Q+D+ QV + IV +++ + Sbjct: 288 AGEGTTRAPSVSHHAPTNALVINADPDVQRQLELVIRQLDIRRPQVLVEGIIVEMSDSTA 347 Query: 196 RELGVKWTLADAQHAGG----------------VGQVTTLGSDLS--------------V 225 RELGV+ LA + G T+ G D S + Sbjct: 348 RELGVQMLLAGGEGDTPLAMTRFSSNNPDLLALTGAATSPGDDDSDLNVSLRDAAINSLL 407 Query: 226 ATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 + +GF +G L L L+A+E +++A+P ++A + A G EIP Sbjct: 408 GASGGTLGFGGQNGSGNLFGLVLNAVESDVNSNVLATPSIMALDNEEAYFLSGQEIPVTT 467 Query: 286 -----SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLA 340 S+ + +V+ +E + + V P + + +RL + + + +++ Sbjct: 468 GEALGSNNTNPFRTVDREEVGVKLTVLPQITEGNTVRLHIVQEVSSVAGAVNAGSSDLIT 527 Query: 341 IDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERREL 400 +K+EI T V +GE + LGG+ ++++ +D VP L +P G+LFR +G R L Sbjct: 528 -NKREISTTVLADNGEIIVLGGLIQQEDEISEDGVPGLRRLPGVGRLFRSEGSTTRRTNL 586 Query: 401 VVFITPRLVSSE 412 +VFI P ++ SE Sbjct: 587 MVFIRPTIIRSE 598 Score = 64.5 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 65/187 (34%), Gaps = 10/187 (5%) Query: 5 IAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH--- 61 + L ++++ + A+ Q V + + V+ ++ +V P+V G V++ Sbjct: 12 LCVLSVLVLAPMARAQDQVV--NFNQAEIQAVIDDVSAVTGYTFIVDPNVRGRVTITSQA 69 Query: 62 -LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 LT + Q + ++ G + A R + Sbjct: 70 PLTSDQYFQVFLSTMRVHGYTVVPTASGAYQIVPDQAGARSANPVNSNLRGDQYV---TA 126 Query: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 + L + + + L+ A+GS+ + N L++ D ++ L Q + +D Sbjct: 127 VVRLNHVASRDALAVVRPLIGAQGSVNATETGNVLVMVDYAENIARLRQVIRDLDRDTSV 186 Query: 181 V-ELSAH 186 V + Sbjct: 187 VEMVELT 193 >UniRef50_C4L998 General secretion pathway protein D n=2 Tax=Bacteria RepID=C4L998_TOLAT Length = 685 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 87/407 (21%), Positives = 147/407 (36%), Gaps = 70/407 (17%) Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 AL V+ + + + V S Q Q + R L+YA+A Sbjct: 219 ALTNVLTPKVVADERTNAV--VISGENQGRQRIVTMIRQLDREQQTQGNTRVFYLKYANA 276 Query: 130 GELAKAGEKLLSA-------------------------------------KGSMTVDKRT 152 L + S+ D++T Sbjct: 277 KNLVEVLSGTSKTIQNEKNSASGSMTATGNTADSASSSGSGSSSSGYNGKDLSIVADEQT 336 Query: 153 NRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGG 212 N L++ + LE+ +A++D+ QV + A IV I + GV+W A+ G Sbjct: 337 NALVITAQPDVMQELERIIAKLDIRRAQVLVEAIIVEIQDGDTLNFGVQW--ANTNGGGT 394 Query: 213 VGQVTTLGSDLSVATAT-----------------THVGFNIGRINGRLLDLELSALEQKQ 255 T L + A + G G G L ++AL Sbjct: 395 QFTATGLPTTTVANAANEWRNDGELSSTSTAALSSFNGLVAGFYEGNWAGL-VTALSSNT 453 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA----TSVEFKEAVLGMEVTPTVL 311 + +I+A+P ++ + A+ G E+P S S A ++VE K ++VTP + Sbjct: 454 KSNILATPSIVTLDNKEAAFNVGQEVPVVTGSQSSTAGSVYSTVERKTVGTKLKVTPQIN 513 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVL-------AIDKQEIETQVEVKSGETLALGGIF 364 + + L++ + + + ++ V VKSGET+ LGG+ Sbjct: 514 EGDSVLLEVEQEVSSVASSSSTDSSSSSSNSSLGSTFNTRTVKNSVLVKSGETVVLGGLL 573 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + VPLLGDIP G LFR++G ++ L+VFI P ++ Sbjct: 574 SNNTSESVYKVPLLGDIPILGYLFRYNGTSTTKQNLMVFIHPTILRD 620 Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 70/182 (38%), Gaps = 6/182 (3%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 +K+ + L G+ A + + + + + + + ++V P V GT+++ Sbjct: 5 LKRSLVIGCLCTQLGISPALAAEYSASFKGTDIQEFINTVGKNLGKTIIVDPSVRGTINV 64 Query: 61 H----LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 L + + Q +V+ G N + A + A++ R + Sbjct: 65 RSYDLLNEEQYYQFFLSVLDVYGFAVVPMPNGILKVVKAQNAKTSSIPVADETRTGSGDE 124 Query: 117 LENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 + R + ++ ELA +L + G++ + +N LLL ++ L + V ++ Sbjct: 125 MVTRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYEPSNVLLLTGRAAVVNRLVEIVRRV 184 Query: 175 DL 176 D Sbjct: 185 DK 186 >UniRef50_Q221L0 Type II and III secretion system protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221L0_RHOFD Length = 702 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 28/296 (9%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 + G + D TN L++ + L + ++D QV + + IV +N E G+ Sbjct: 344 TTGGQIQADVATNSLIITAPEPQYRQLRAVIDRLDGRRAQVLVESLIVEVNADRAAEFGI 403 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVAT------------ATTHVGFNIGRI----NGRLL 244 +W G G + LG++ A G N G + +L Sbjct: 404 QWQ--GPLGKAGDGVIGLLGTNFGAAGKNIINLATGAGAVAPGAGLNFGAVQRTNGVYVL 461 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT---------SV 295 + LE +++++P LL + A I G +P+ S S T +V Sbjct: 462 GFLANFLETSGSGNVLSTPNLLTLDNEEAKIVIGENVPFVTGSYTSNNTSGASVNPFTTV 521 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 E K+ L ++V P + + G +++ ++ + + + D K+ IE+ V V G Sbjct: 522 ERKDVGLTLKVKPQINEDGTVKMVIYQETSAV-KAGTEKDANGPTTSKRTIESTVLVDDG 580 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + LGG+ K QD VP LGD+P FG LF+ + + + L+VF+ P +V Sbjct: 581 SIVVLGGLLQDKYSGNQDKVPGLGDVPLFGNLFKSEARTRNKTNLMVFLRPVVVRD 636 Score = 85.3 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 11/183 (6%) Query: 4 WIAALLLMLIPGVQAAKPQK---VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 + AL + + +A + VTL + + V + +A N+VV P V GT++L Sbjct: 24 GVTALFPINLLAQASAVSKPGEAVTLNFSNADIEAVARTMATITGTNVVVDPRVKGTLTL 83 Query: 61 HLTDVPWKQ-----ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL 115 +TD P + Q ++ G + + V A L Sbjct: 84 -VTDKPVSRRAAMNQFQAALRLQGFTMVESAGLYKVVPEADAKLQSGAVTVSDEAIGGAL 142 Query: 116 --PLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQ 173 + + L + A L L+S ++ V+ TN L++ D L + + +A Sbjct: 143 GNQITTQIFKLNFESANNLVAVLRPLISPNNTINVNPGTNSLVITDYADNLRRMARIIAA 202 Query: 174 MDL 176 +D+ Sbjct: 203 VDV 205 >UniRef50_A8ZWZ5 General secretion pathway protein D n=2 Tax=Desulfobacteraceae RepID=A8ZWZ5_DESOH Length = 799 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 79/372 (21%), Positives = 151/372 (40%), Gaps = 41/372 (11%) Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE-- 137 L+ N++ + + + I + + L+ ADA ELAK + Sbjct: 289 LVADDRANVVIMLASESETVKIRKLITLLDKKVQQGKERIHVYYLKNADAEELAKVLQML 348 Query: 138 ---------------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE 182 +LS ++T D TN L++ + L++ + ++D+P V Sbjct: 349 PEKQGDATAEGKKLAPVLSKAINITADASTNSLIIMAERDDYLVLKEIIEKLDIPRSMVY 408 Query: 183 LSAHIVTINEKSLRELGVKWTLADAQHAGGVGQV----------TTLGSDLSVATATTHV 232 + I +N ELG +W + T + +A Sbjct: 409 IECLIAEVNINKDFELGAEWLVGGKGSYDDKDGGYAVGFGGGSDTGYANVARMAMGGLPS 468 Query: 233 GFNIGRINGRL---------LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 GF++G + + L + A ++ + + I+++P+++ + Q A+I G IPY Sbjct: 469 GFSVGAMAESIVVGGIEYPNLAAVVRAFKKDKDVQILSTPQIMTTDNQEATITVGKNIPY 528 Query: 284 QV----SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL 339 +S E ++ E+K+ + +++ P + + IRL + Q L + Sbjct: 529 LTKIGTTSSEETYSNYEYKDVGISLKIKPQINENRLIRLDIEQELTKLDQ-LTTVSLDRP 587 Query: 340 AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRE 399 A K+ I T V V T+ +GG+ + VP LGDIP+ G LF+ + E+ Sbjct: 588 ATLKRGITTNVIVHDEHTIVIGGLIDDSMSRVEYKVPCLGDIPFLGWLFKGLSRSSEKTN 647 Query: 400 LVVFITPRLVSS 411 L+VF+TP ++ + Sbjct: 648 LLVFLTPHVIKT 659 Score = 95.3 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 6/177 (3%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-HLTDVPWKQA- 70 +P V++ +DV +A ++ ++E N V+ +V V++ + +P ++A Sbjct: 71 LPTAADDGENLVSVDFNDVDLAVFIKFISEVTGKNFVLDQNVRTKVTVISPSKIPVEEAY 130 Query: 71 --LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 ++V++ G T + G+I+ V + + + L + I L+YAD Sbjct: 131 RVFESVLEVYGFATVEAGDIIKVVKAGDARSKSIETGLVKEGRAPDDKLVTQIIPLRYAD 190 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP--VGQVEL 183 A E+ L+S + TN L+L D + + L + + +D+ QV + Sbjct: 191 ANEIKGLFTPLVSKDSVLLAYPSTNMLILTDAYSNIQRLMRILDAIDVTGIGRQVSV 247 >UniRef50_C1A7C5 Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7C5_GEMAT Length = 621 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 76/358 (21%), Positives = 150/358 (41%), Gaps = 11/358 (3%) Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEG-NILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 ++L ++ V G+ G LS S++ + ++ E R + Sbjct: 236 VNLKYASAEEMAGVVGSLYGVQVANAGAGSLSDRSLSRALDTFRARDQETFRTRQTTSSS 295 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 + + A + AG LL + ++ + TN L++R L + + +D+ Sbjct: 296 GAATPVTGATVARDSAAG--LLVGRTTVVANTPTNSLVIRTAPPNFPMLRETIEALDIRP 353 Query: 179 GQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGR 238 QV I I E G+ W + G G+ T +T + R Sbjct: 354 AQVLFEVTIAEIALGRGFEFGIDWAAVNR----GGDVQAQFGNPEIPDTGSTSALLRVVR 409 Query: 239 INGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS---- 294 ++G + L + K ++ ++A+P ++A++ + ASI GS++P+ S+ S Sbjct: 410 LDGTGVRALLRTIASKSEVQVLATPEIMAANNREASILVGSKVPFISSTRLGNDISIDRA 469 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 V++++ + + PT+ +G I ++L + A I +E T+ ++ Sbjct: 470 VQYQDVGTKLAIIPTINDEGYISVQLLQEVSSLTPQTVAAALSAPVISTREASTRAVLRD 529 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G+T + G+ + +P+L DIPW G LF+ +R EL +F+TP +V S+ Sbjct: 530 GQTAVIAGLIGETRTTQDQGLPILKDIPWLGALFKRQSSTRQRTELAIFVTPYVVRSD 587 Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 4/158 (2%) Query: 25 TLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTVVKSAGL 80 +L + +A V++ LA +++S ++ ++ ++ L++V+++ GL Sbjct: 68 SLDFANARLADVIRTLATMLGRTVILSDIPDVRLTFATPSAVSTSDLERVLESVLEAHGL 127 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 + G + V + L L + + LQ A E A A +L Sbjct: 128 MLVSSGTVAQVMPNDKAPMTGTLRSGFPFPDPPPLGLVTQLVPLQSIRADEGADALRAVL 187 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 + + + R+N LLL D ++ + +D Sbjct: 188 AKGARVEIVARSNALLLVDRGANMARYLDLLRTLDAAP 225 >UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax=Alteromonadales RepID=Q21EP4_SACD2 Length = 666 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 104/472 (22%), Positives = 191/472 (40%), Gaps = 88/472 (18%) Query: 26 LMVDDVPVAQVLQAL----------AEQEKLNLVVSPDVSGTVSLHLTDV---------- 65 + + ++ A+VL L + + N++V D + + L DV Sbjct: 138 IQLKNIEAAKVLPVLRPLVPQHSHLSSYTESNVIVVSDTAPNI-ARLRDVIERIDTAALP 196 Query: 66 -------PWKQALQTVVKSAGLITRQEGNILSVH-----------SIAWQNNNIARQEAE 107 + A V L ++ + V+ S+ +I R+ A+ Sbjct: 197 TTEVVPLKYADAEDLVATLTKLDRGEKQSSTPVNQLQIVADKRNNSVLLSGEDIQRKRAK 256 Query: 108 QARAQANLPLE----NRSITLQYADAGELAKAGEKLLSAK---------------GSMTV 148 + + P R + L YA+A ++A K++ ++ Sbjct: 257 DLIRKLDRPPVQMGNVRVVYLNYANAKDVAATLSKVVQNMQQMQPGGKDKGGKDGATVEA 316 Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 D+ TN LLL + L++L V ++D+ QV + A IV IN + +ELGV+W ++ Sbjct: 317 DEDTNALLLTGSGDMLNSLLTIVERLDIKRAQVLVEAIIVDINVDANKELGVQWMFSNEN 376 Query: 209 HAGGVGQVTTLGSDLSVATATTHVGFNI-------------------GRINGRLLDLELS 249 + G GS S+AT T G + G G LS Sbjct: 377 NGTFGGSSQGDGSLGSLATGTLGGGTDALTNLASGIAGNTGQLLGVAGNNGGENFIALLS 436 Query: 250 ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG---------ESGATSVEFKEA 300 AL+ +I+++P L+ Q ASI G +P++ S + T+++ ++ Sbjct: 437 ALQTSSDANILSTPSLVTMDNQEASISVGQSVPFRTGSYSTTGTTGSVGNPFTTIQREDV 496 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 + + VTP V + +I L + + + + L ++ +IETQ+ G+ + L Sbjct: 497 GITLTVTPHVNEGNKILLDISQEVSSISSSVAGSAD--LITNQSKIETQLLANDGQIVIL 554 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 GG+ + G VPLLG IP G LF++ + ++ L+VFI ++V+ + Sbjct: 555 GGLIQEDVQDGDTRVPLLGSIPLLGHLFKYQSTKFLKKNLMVFIRVKIVTDD 606 Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 68/169 (40%), Gaps = 7/169 (4%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQ 69 P + ++P T+ D + +V++ +A+ +V+ P V G + + + + Sbjct: 25 PAARGSQP-SYTVNFKDTDIHEVIKFVADATGKTIVIDPRVKGRIKVISQTTVNKDELFE 83 Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNN--IARQEAEQARAQANLPLENRSITLQYA 127 T+++ Q G+++ + + ++ + E++ + I L+ Sbjct: 84 LFLTILEVHDFTAVQVGDVVRILPLKDARSSPVPVQDESDVGNRASTNGYVTEVIQLKNI 143 Query: 128 DAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 +A ++ L+ ++ +N +++ D ++ L + ++D Sbjct: 144 EAAKVLPVLRPLVPQHSHLSSYTESNVIVVSDTAPNIARLRDVIERIDT 192 >UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF18_CELJU Length = 681 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 82/381 (21%), Positives = 160/381 (41%), Gaps = 61/381 (16%) Query: 90 SVHSIAWQNNNIARQEAEQARAQANLP----LENRSITLQYADAGELAKAGEKLLSA--- 142 ++++ ++++RQ + + P R + L+YA A ++AK ++ + Sbjct: 244 RINAVVISGDDMSRQRLKFLIDDLDRPQTKNANVRVVYLRYAKAEDVAKVLTGMMQSFTQ 303 Query: 143 ------------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 + + D TN +LL + + + V +D+ QV + A I + Sbjct: 304 SRQAEGAAPNTQQPGVQADPATNSVLLTADVDTMDTMLSIVDSLDIRRAQVLVEAIIAEV 363 Query: 191 NEKSLRELGVKWTLADAQHAGGVGQV---------------------------TTLGSDL 223 +++ +ELG++W D ++ G T L + Sbjct: 364 SDEDGKELGIEWMYRDDKYGFGASANGSRGSIGGIGSAVLAASDKNASQDDKDTALANLA 423 Query: 224 SVATATTHVGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 S + + F GR+ R L ++ + +I+++P LL + A I G ++P Sbjct: 424 SGLSGLSGQMFGFGRLGERTDFLAVLKLMQSSSKTNILSTPSLLTTDNNQAVISVGRQVP 483 Query: 283 YQVSSGESGAT-----------SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVL 331 ++ S + T ++ ++ L +EVTP + + I L + + V Sbjct: 484 FRTGSYSAVGTGGNSTIGSPFTTINREDVGLKLEVTPHINEGDSIVLDIKQEVSSLSDVS 543 Query: 332 QQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHD 391 + + +K+EI+TQ+ GET+ LGG+ T + ++G+ VP+LG IP GQLFR Sbjct: 544 SEDG---IITNKREIQTQILSSDGETIVLGGLITDEVQTGERRVPVLGSIPVLGQLFRSQ 600 Query: 392 GKEDERRELVVFITPRLVSSE 412 + L+VFI +V + Sbjct: 601 TSSKSKTNLLVFIRATVVRDD 621 Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 66/156 (42%), Gaps = 6/156 (3%) Query: 25 TLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV----SLHLTDVPWKQALQTVVKSAGL 80 T+ +D + +V++ +A +++ P V G + S LT + + G Sbjct: 44 TVNFNDTDIQEVIKFIAGATGKTIIIDPKVRGPIKVINSKPLTSKEVYELFLASLDVYGF 103 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 + GNI+ + +A ++ E+ + + I L+ A ++ A L+ Sbjct: 104 TAVESGNIVRI--VANRDARNLPIPTEKNVNVRDDLYITQVIPLKNTSAAKILAALRPLV 161 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 G +T + +N L++ D + ++ + + V Q+D Sbjct: 162 PQYGHLTTYEPSNALIITDTRANVARMNELVVQLDK 197 Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 10/145 (6%) Query: 44 EKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV-KSAGLITRQEGNILSVHSIAWQNNNIA 102 + N+ V D+ T + L + + L + + I N+A Sbjct: 127 TEKNVNVRDDLYITQVIPLKNTSAAKILAALRPLVPQYGHLTTYEPSNALIITDTRANVA 186 Query: 103 RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL---------LSAKGSMTVDKRTN 153 R + + I L+YA+A E+ +L ++ + DKR N Sbjct: 187 RMNELVVQLDKIGITQTDVIPLRYANATEVVNMLTQLEKPDPNRGMTTSPPVIVADKRIN 246 Query: 154 RLLLRDNKTALSALEQWVAQMDLPV 178 +++ + + L+ + +D P Sbjct: 247 AVVISGDDMSRQRLKFLIDDLDRPQ 271 >UniRef50_C4UIB8 General secretion pathway protein D n=4 Tax=Yersinia RepID=C4UIB8_YERRU Length = 674 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 143/342 (41%), Gaps = 25/342 (7%) Query: 93 SIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA---------- 142 S + A ++ + + I L+YA A +L + + Sbjct: 268 SGDPASRKSAESMIKKLDKEQISHGNTKVIYLKYAKAEKLLDVLNGVSVSIKDEKKKVSH 327 Query: 143 ------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 K + D +TN L++ + + LE+ + ++D+ QV + A IV + Sbjct: 328 ISNTIKKSMIKADDQTNSLIITASPNVMYDLEKVIEKLDIRRAQVLVEAIIVEAQDGEGI 387 Query: 197 ELGVKWTLADAQHAGGVG-QVTTLG--SDLSVATATTHVGFNIGRINGRLLDLELSALEQ 253 LG++W + G + + LG + + A G G G L +AL Sbjct: 388 NLGIQWDTKQKKVGGFISYNKSNLGNIQNGVTSIANGISGLTTGFYRGNWSGL-FTALAT 446 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPT 309 +I+A+P ++ A G E+P Q +S + ++ + + ++V P Sbjct: 447 NSSNEILATPSIVTLDNMDAEFSVGQEVPVLSSQQTTSTDKVYNTISRQSVGIMLKVKPQ 506 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFTRKN 368 + + + L++ + + + +K+ + V VKSGET+ +GG+ +K Sbjct: 507 INKGDSVLLEIRQEVSSVAENSNVDKDNIGSTFNKRVVNNAVLVKSGETVVVGGLLDKKV 566 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + + +PLLGDIP G LFR ++ E+R L++FI P ++ Sbjct: 567 SNVINKIPLLGDIPIIGNLFRQKKEKIEKRNLILFIKPTIIR 608 Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 6/181 (3%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL- 60 K + L+ + A ++ +D + + + +++ +++ P V G +S+ Sbjct: 33 KSGRVLVTLVFVIYTSNAYSSDFSVKFNDADIKEFINTVSKSLNKTIIIDPKVQGLISVR 92 Query: 61 ---HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPL 117 L + Q V+ G + N + + + + A + L Sbjct: 93 SYERLDKEKYYQFFLNVLDVHGFTVLEMPNNILKVIPSKRAKSSAPPILMKDDIFNGDEL 152 Query: 118 ENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 NR I L+Y A + +L + GS+ + TN LL+ + L + +++ D Sbjct: 153 INRIIPLKYISAKNVTPLLRQLNDNTDSGSVAHYEPTNSLLITGRAGTVKRLVEIISEFD 212 Query: 176 L 176 Sbjct: 213 R 213 Score = 42.5 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 10/65 (15%) Query: 122 ITLQYADAGELAKAGEKLL----------SAKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 L YA A E+ K +LL + + D+RTN +L+ + + + E + Sbjct: 222 YKLAYASATEVTKLVTELLRPNVAGKQDTAQMVKVVADERTNSILISGDPASRKSAESMI 281 Query: 172 AQMDL 176 ++D Sbjct: 282 KKLDK 286 >UniRef50_Q1YQU4 Putative general secretion pathway protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQU4_9GAMM Length = 629 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 90/459 (19%), Positives = 183/459 (39%), Gaps = 60/459 (13%) Query: 5 IAALLLMLIPGVQA-----AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS 59 +A L+ +L P + + A Q +++V DV + +L+ + L+ P ++ Sbjct: 136 VATLVPVLKPVMSSGARLNAFTQSNSMVVTDVQ-SNILRLESLIADLD---DPTLNAVEV 191 Query: 60 LHLTDVPWKQALQTV-----VKSAGLITRQEG-NILSVHSIAWQNNNIARQEAEQARAQA 113 + L ++ +A+ +K+ L ++G N + S + + + Sbjct: 192 IRLKNISAGEAVYIAGQLKQLKNQDLSLVEDGMNNRVIISGTASARRAFKAMLKTLDQPS 251 Query: 114 NLPLENRSITLQYADAGELAKAGEKLLSAKG------------------SMTVDKRTNRL 155 I L Y+ A E+ E +L + + +D+ N L Sbjct: 252 TKKGSVEVIYLDYSRAAEMKPIVEGMLQSDVFLQLAGEAVADKKAKAAYQIQIDELNNAL 311 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQ 215 ++ + ++ VAQ+D QV + A I ++E +EL + + G + Sbjct: 312 VVAAPTAVIREIKNVVAQLDRSRPQVLIEAVIAELSEDQAQELSSQLAYSSKNRGGYLTN 371 Query: 216 VTTLGSDLSVATATT----------------HVGFNIGRINGRLLDLELSALEQKQQLDI 259 L + L+ + V + G+ + L + AL+ I Sbjct: 372 FDGLLATLTGLGISGVEPTAAELGLLPKKVMAVAGDFDSETGKGIGLLIQALKTDGSTKI 431 Query: 260 IASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKEAVLGMEVTPTVLQ 312 +++P ++ + A++ G E+P+Q S S T++ +E + ++V P + + Sbjct: 432 LSTPSVVTLDNEEATLSVGEEVPFQTGSFTSSNNGSNNPFTTINREEVGVKLKVKPQISK 491 Query: 313 KGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQ 372 +RL++ ++ + K ++T V ++ GE L LGG+ + Sbjct: 492 GDSVRLEIEQE----SSKVKSGVPGLQTTSKSTMQTNVLIQDGELLILGGLIEDQTGGSA 547 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VPLLGDIP G+LFR K D + L++FI P ++ + Sbjct: 548 TKVPLLGDIPLLGRLFRSTSKADSQSVLMMFIRPTIIRT 586 Score = 79.9 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 77/182 (42%), Gaps = 12/182 (6%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 + + + AL ++L + + + V + D + V++++AE + V+ P V G V++ Sbjct: 12 IIRLLGALSIVLSMIAEISAGEVVRINFRDADIRSVIESVAEITGKSFVLDPRVKGKVTI 71 Query: 61 ----HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + +A+ + ++ G ++G + + Q A + Sbjct: 72 IAPEAIDSDLLYEAVLSAIQVQGFQAIEDGAVTRIVPFT--------QAFNFAGGAGDNR 123 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 L + I +++ L + ++S+ + ++N +++ D ++ + LE +A +D Sbjct: 124 LITKVIQIEHVQVATLVPVLKPVMSSGARLNAFTQSNSMVVTDVQSNILRLESLIADLDD 183 Query: 177 PV 178 P Sbjct: 184 PT 185 >UniRef50_Q7UXD4 Putative uncharacterized protein outD n=1 Tax=Rhodopirellula baltica RepID=Q7UXD4_RHOBA Length = 521 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 90/403 (22%), Positives = 177/403 (43%), Gaps = 37/403 (9%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 + + V +VL LA L+LV+ +V+G V+ + D+ A++ V+ GL + Sbjct: 131 INEEFIETDVREVLTLLATDANLDLVLDDNVAGIVNAQINDLTLDDAVEKVLLPLGLASS 190 Query: 84 QEGNILSVHSIAWQNNNIA----RQEAEQARAQANLPLENRSIT-LQYADAGELAKAGEK 138 + G L V + A + + + N LE ++ LQY Sbjct: 191 RRGKQLIVAPPDPASPLFAMVSIKTQYQPLHMDPNTLLETVPVSWLQY------------ 238 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 +TV ++ +L+ + + + +D P+ QV L A I ++ S + Sbjct: 239 -------VTVIEQAKTMLVEAPPRIANDIVERFQNIDQPIPQVVLEAIICVVSPDSGFQF 291 Query: 199 GVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 G+ W A GV +++ S L++ + G + + + L +K L Sbjct: 292 GLDWQ--HAVEMDGVKELSLSASGLALNGELSQAGLDAIFSDFGNTSAFVRLLSEKGYLT 349 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQV-SSGESGATSVEFK------EAVLGMEVTPTVL 311 I A+P ++A + A+I E + V G +G SV F+ +A + +++TP + Sbjct: 350 IRATPHVMAKDGEQANIAINRETFFSVQPPGSTGNNSVFFQQNIQKVDAGIMLDITPHI- 408 Query: 312 QKGRIRLKLH---ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 + + + + +S++V + + I+++ + T V VK G+T+ +GG+ R+ Sbjct: 409 RGDEVTIDIEKAEVSEDVRNATPALSINQYPIINRRSVSTTVSVKDGKTIVIGGLVQRET 468 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + +P L +P G LF+ ++ E+V+FI+PR+V S Sbjct: 469 VDRVNRIPGLSRLPGVGYLFQTTQRQTRDAEVVIFISPRIVRS 511 >UniRef50_Q1NKF6 Type II and III secretion system protein:Secretin/TonB, short-like n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NKF6_9DELT Length = 557 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 95/476 (19%), Positives = 189/476 (39%), Gaps = 69/476 (14%) Query: 6 AALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDV 65 +L PG + P++ + V V L N+VV P VSG++SL+L DV Sbjct: 58 TSLAPPFDPGSPSPGPERFDIDVQGVEAQTFFMNLVRGSSQNMVVHPGVSGSISLNLRDV 117 Query: 66 PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNN-------NIARQEAEQARAQANLPLE 118 ++ L TV G RQ ++ Q+ +++R +R + E Sbjct: 118 TLREVLDTVRDVYGYDFRQTSAGWQIYPATLQSRMFRIDYLDVSRDGRSDSRVSSGTLTE 177 Query: 119 --------NRSITLQYADA-GELAKAGEKLL-SAKGS--------MTVDKRTNRLLLRDN 160 ++ T AD +L + + ++ + +G + V+ ++ +++R Sbjct: 178 DGGAGSSGSQITTTSQADFWRDLESSLQMIVGTDRGREDGSQARQVIVNSKSGLVMVRAL 237 Query: 161 KTALSALEQWVAQM-DLPVGQVELSAHIVTINEKSLRELGVKWTLADAQH---------- 209 L +E ++ + + + QV L A I+ + + G+ W Sbjct: 238 PGELREVETFLDALLENALRQVMLEAKIIEVELDEAFQSGINWGKLATSGRDTLKLGQIG 297 Query: 210 ------------AGGVGQVTTLGSDLSVATATTHVG--FNIG-RINGRLLDLELSALEQK 254 AG G ++ + T T+ G F + ++ + L+ + Sbjct: 298 GGTVLDDGVSAIAGNTGNLSADNYNPIDGTTTSAFGGVFTLATSLDHSSFHAFIELLKTQ 357 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS---------VEFKEA--VLG 303 + +++SPR+ ++ Q A IK G++ + S T+ +E + Sbjct: 358 GDVHVLSSPRVATTNNQKALIKVGNDEYFVTDVSFSTRTTGTDDTIYPDLELTPFFSGIA 417 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQ------VLQQADGEVLAIDK-QEIETQVEVKSGE 356 ++VTPT+ + L + S + V Q LA+ + +E ++ V +SG+ Sbjct: 418 LDVTPTITDGNEVILHIRPSVSQVRDQTKSFTVAGQTQSLPLALSRMRESDSIVRARSGQ 477 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + +GG+ + + +P LGD+P G LFR + ELV+ + P +V++E Sbjct: 478 VIIIGGLMEDSWREQRAGLPGLGDLPLVGNLFRQQRWSQRKTELVILLRPVVVTNE 533 >UniRef50_C6CIN5 General secretion pathway protein D n=1 Tax=Dickeya zeae Ech1591 RepID=C6CIN5_DICZE Length = 696 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 119/281 (42%), Gaps = 6/281 (2%) Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 G L + + D+ N L++ A+ + Q+D+ QV + A +V + + Sbjct: 363 GGDALVRQIRVHADRDNNALIVSAPPDAMRQAASIIRQLDVRHEQVLVEAIVVEVQQAEG 422 Query: 196 RELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFN--IGRINGRLLDLELSALEQ 253 LG+ W + + G + G + +ALE Sbjct: 423 LNLGIAWGNRNYGGSNFNSVNVGNGFNQPNPLVNALKGTEGLVAGFYHGNWGTLFNALES 482 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPT 309 ++ +I+A+P ++ A G ++P Q ++ ++ +V+ + + + P Sbjct: 483 NKRNNILATPSVVTLDNHRAEFNVGQDVPILTGSQTTNNDNIFNTVQRRTIGIKFSILPR 542 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 + Q G I L + + Q + + + V+V+ ET+ +GG+ + K Sbjct: 543 INQSGTILLNISQEISSLSDTAQVNSNLGSVFNIRTVNNVVQVQDDETVVIGGLLDDEKK 602 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + VPLLGDIPW G LFR+ + +++R L++FI PR++ Sbjct: 603 ETTNKVPLLGDIPWLGNLFRYTSQNNDKRNLMLFIRPRIIR 643 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 57/169 (33%), Gaps = 10/169 (5%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQ 72 A K + +V + + + A+ K N+++ P V+G +S+ L + + Sbjct: 39 AANTSNKYSASFREVEIKEFVATAAQVLKKNIIIDPSVTGQISVRSYDDLDETQYFVFFL 98 Query: 73 TVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 V+++ G Q + + L++ +A R + + R + E Sbjct: 99 NVMETYGYSVVQIDNHTLNIVPLA----QSLRAAWTEGNTGREKNIVVRLAKMDALPGSE 154 Query: 132 LAKAGEKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 L ++ + N + + + L V Q+D Sbjct: 155 LEPILSRISEDVAVKLKYYSPGNLFIFTGREDVVKRLVDIVNQVDNARK 203 >UniRef50_Q2JP24 Type IV pilus secretin PilQ, putative n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JP24_SYNJB Length = 696 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 89/432 (20%), Positives = 172/432 (39%), Gaps = 50/432 (11%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG-TVSLHLTDVPWKQALQ 72 P V +++L + D PV VL L + LN+V++ T+SL + D P ++ Sbjct: 271 PTVDLGSNARISLTLKDAPVGDVLSLLVRRAGLNVVLNDVPPDLTISLDVQDSPLQETFN 330 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 +++ L ++ G + V + R+ + A A +L Sbjct: 331 FILRLKQLQAQRRGQTVFVG----------------QNLPGVTGILVRNYRVNQAVATDL 374 Query: 133 AKAGEKLL---SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 A E++L + VD+RTN + + N +AQ+D+ QV +S V Sbjct: 375 ASRLEEVLNAVAPGAQFVVDERTNSITVIGNSRQQDIAAAQIAQLDVRRRQVLISLRAVD 434 Query: 190 INEKSLRELGVKWTLADAQHA-GGVGQVTTLGSDLSVATATTHVGFNIGRINGRL----- 243 I L V A A G +G G L+ ++ +G + Sbjct: 435 IRLDKNESLSVNLGGASGNFALGTLGDANFGGRPLNQPAGSSVSSIGPAGPSGSITGIFN 494 Query: 244 --------LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS-----GES 290 L L + + Q I+ P+++ + + I + +P V + GE+ Sbjct: 495 TLNRLQQSLALRVQSAIQNGTGKILTDPKVVVADGGSSRISIATSVPVNVETITIPQGEN 554 Query: 291 GATSV----EFKEAVLGMEV-TPTVLQKGRIRLKLHISQNVPGQVLQQADGE-----VLA 340 V + ++A + ++V + G + L + ++P G+ + Sbjct: 555 QPPVVTQRLQREDAGVILDVSEVRIDDNGFVTLTIQPEISIPVPSQILGGGDFAGILLFN 614 Query: 341 IDKQEIE-TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRE 399 ID+++++ +Q+ ++ G+T + G+ ++ VP LGD+P G LFR +ER E Sbjct: 615 IDRRQLQASQLRLRDGQTFIIAGLIQDRDIVDVQKVPFLGDLPLLGALFRSQSVNNERNE 674 Query: 400 LVVFITPRLVSS 411 +V +TP ++ Sbjct: 675 VVFMLTPYIMDD 686 >UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Burkholderia RepID=B2T7P2_BURPP Length = 791 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 126/301 (41%), Gaps = 32/301 (10%) Query: 143 KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW 202 G + D TN L++ + L + Q+D QV L A IV +N + LG++W Sbjct: 375 GGMIQADSATNSLIITAAEPVYRNLRAVIDQLDARRAQVYLEALIVELNSNTSGNLGIQW 434 Query: 203 TLADAQHAGGVGQVTTLGSDLSVATATTHV------------------GFNIGRINGRL- 243 +A+ G T + + TA G NIG I+ Sbjct: 435 QVANNSIFAGTNLQTGSSNSIVNLTAAAVAAGSTGGLAGALGNGTLQQGLNIGWIHNIFG 494 Query: 244 ---LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS--------GESGA 292 L L AL Q +++++P L+ + A I G+ +P Q S S Sbjct: 495 VQGLGALLQALSQTADANVLSTPNLITLDNEEAKIVVGTNVPIQTGSYSNLTSATATSAF 554 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQN--VPGQVLQQADGEVLAIDKQEIETQV 350 + + + L + V P + G ++L+L+ + V G + K+ I++ V Sbjct: 555 NTYDRVDVGLTLHVKPQITDGGILKLQLYTEDSAIVTGTNNAATNPAGPEFTKRSIQSTV 614 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +GE + LGG+ + VPLLGDIPW GQLFR + K + L+VF+ P ++S Sbjct: 615 LADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSEQKTRNKTNLMVFLRPVIIS 674 Query: 411 S 411 Sbjct: 675 D 675 Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 84/221 (38%), Gaps = 8/221 (3%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 +++ ALL+ + Q A+ Q VTL + + QV +A+ ++V P V G ++L Sbjct: 8 LRRVATALLVAGLITAQTAQAQ-VTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNL 66 Query: 61 HLTD-VPWKQALQTV---VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + VP QAL+T+ ++ G Q+ +L V A Sbjct: 67 VSENAVPEDQALKTLQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNTPVARGDQ 126 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + + L+ A L L+S ++ N +++ D + + Q + +D Sbjct: 127 VVTQVFVLKNESANNLLPVLRPLISPNNTVAAYPANNTIVVTDYADNVRRIAQIIQGVDS 186 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVT 217 GQ S +V + + ++ + + G T Sbjct: 187 AAGQ---SVSVVQLKNANAIDIATQLNKMLDPGSIGSTDAT 224 >UniRef50_P31700 General secretion pathway protein D n=5 Tax=Enterobacteriaceae RepID=GSPD1_ERWCH Length = 712 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 130/298 (43%), Gaps = 29/298 (9%) Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 + + ++ +TN L++ + LEQ + Q+D+ QV + A I I + L Sbjct: 358 IQGKEVTVRAHDQTNSLIITRPPDIMRDLEQVINQLDIRRPQVLVEAIIAEIQDADGLNL 417 Query: 199 GVKWTLADAQHAGGVGQVTTLGSDLSVA-----------TATTHVGFNIGRING------ 241 G++W A G+ Q T G +S A T TT + NG Sbjct: 418 GIQW----ANKRAGMTQFTNTGIPISTAMIGTDQFRSDGTLTTAYASALSNFNGITAGFY 473 Query: 242 -RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY------QVSSGESGATS 294 + L+AL + D++A+P ++ A+ G E+P V SG++ + Sbjct: 474 RGNWSMLLTALSSDGKNDVLATPSIVTLDNMEATFNVGQEVPVLTGSQTTVGSGDNIFNT 533 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVK 353 VE K + + V P + + + L++ + + ++ + + + + + V V Sbjct: 534 VERKTVGIKLRVKPQINEGDSVLLQIEQEVSSVAEGNGSSNSSLGVTFNTRTVNNAVMVT 593 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + ET+ +GG+ + + VPLLGDIPW G LFR + +R L++F+ P ++ Sbjct: 594 NRETVVVGGLLDKTAIETNNKVPLLGDIPWLGSLFRSKTQTMSKRNLMLFLRPTIIRD 651 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 65/181 (35%), Gaps = 6/181 (3%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH 61 K W L +L+ G + + + + + +++ +++ P V GT+S+ Sbjct: 8 KSWGWLGLTVLLLGSPCGWAAEFSASFKGTDIQEFINTVSKNLNKTVIIDPTVRGTISVR 67 Query: 62 LTDVPWK----QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPL 117 D+ + Q +V+ G N + + + + A + L Sbjct: 68 SYDMMDEGQYYQFFLSVLDVYGFSVVPMDNGVLKVIRSKDAKSSSIPLANNEQPGVGDEL 127 Query: 118 ENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 R + L A +LA +L + G++ + +N LL+ + L V +D Sbjct: 128 VTRVVPLNNVAARDLAPLLRQLNDNAGAGTVVHYEPSNVLLMTGRAAVIKRLVDIVNTVD 187 Query: 176 L 176 Sbjct: 188 K 188 >UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Methylococcus capsulatus RepID=Q609V4_METCA Length = 751 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 8/281 (2%) Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 L + D N L++ +E + +D+ QV + A IV I+ K+ + Sbjct: 435 TQLGNNARVVADPANNALIVIAKPQDWKEIEAVIKALDVLPLQVLIDATIVEISLKNDLQ 494 Query: 198 LGVKWTLADAQHAGGVGQ-VTTLGSDLSVATATTHVGFNIGRI-NGRLLDLELSALEQKQ 255 G+KW ++ +G + L D A+ GF+ I NG + + L+ L Q+ Sbjct: 495 YGLKWLISSGSSTEALGSPLAALVKDFINGAASASGGFSYALIANGGNVKVLLNLLAQEN 554 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA------VLGMEVTPT 309 +++I+SP L+ + Q A I G ++P + S + +++ P Sbjct: 555 LVNVISSPSLMVLNNQQAKINVGDQVPVLTGTTASATIGTTQFNQFQQQQSGVTLQIRPR 614 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 V G + L++ + + P V + + +EI++ V V +G+TLALGG+ + K Sbjct: 615 VNSGGLVSLEIFQAISTPSPVEVGSGQKTFQFANREIQSVVAVPNGQTLALGGLISDKRS 674 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 Q +P L IP G +F + ER ELVV ITPR+V Sbjct: 675 ETQTGLPYLNQIPMIGWMFGSTEIKPERTELVVLITPRVVE 715 Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 7/165 (4%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ----AL 71 K K TL DD +++V + L + K+N V+SP V+G VSL T + L Sbjct: 47 SPRKEGKYTLNFDDADLSEVTKVILGDTLKVNYVLSPKVTGKVSLQTTRPLTEDEMIPTL 106 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 +T+++ G +EG + + A + + + L R I L+Y A E Sbjct: 107 ETLLRMNGAALIREGGMYKIEPDAQAAISASGPGVGLGMMEPGYQL--RVIPLRYISAAE 164 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + K E ++ K + +D+ N +++ L + + V D+ Sbjct: 165 MQKVLEPIMPPKAVLRMDETRNLVMVAGTAEELGGVMEAVQIFDV 209 >UniRef50_Q2BKX4 Putative MSHA biogenesis protein MshL n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKX4_9GAMM Length = 524 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 83/435 (19%), Positives = 169/435 (38%), Gaps = 41/435 (9%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 A+ ++ + + +P L + N++V V G +SL L DV + +Q V + Sbjct: 70 AASADERFDITAEALPAKDFFMGLVQGTAYNMIVHEAVGGNISLELKDVSVDEVMQAVQR 129 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQAR-------------------AQANLPL 117 G + GN+ V + Q + R A + Sbjct: 130 VYGYEYNRTGNLYQVLPASLQTEIFQINYLDIQRDGTSDTQVSAGSVSNSGDNASGEEVI 189 Query: 118 ENRSITLQYADA-GELAKAGEKLLSAKGS-MTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 R T + G L + +++ +G + V +T +++R + L+ + +++Q + Sbjct: 190 GTRISTKTSTNFWGGLQETLNTIVTGEGRKVVVTPQTGVVVVRALPSELATVRDYLSQAE 249 Query: 176 -LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGF 234 + QV + A I+ + + + GV W++ +G T L+ A G Sbjct: 250 LILHRQVVIEAKILEVTLNNGFQAGVNWSILGEPGSGNTANFTQSSVGLTNQDAIG--GI 307 Query: 235 NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-- 292 ++ + L + + +++SPR+ + Q A IK G++ + + Sbjct: 308 FKADLSIGDFSAVIELLGSQGDVQVLSSPRVSTVNNQKAVIKVGTDEFFVTEVENTTTTG 367 Query: 293 ------TSVEFKEA--VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK- 343 S+E + ++VTP + G I L +H + + +Q + Sbjct: 368 TSTTTSPSIELTPFFSGIALDVTPQISANGDIVLHIHPTVSEVVDQQKQISVGTDDFNIP 427 Query: 344 ------QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 +E ++ V +SG+ + +GG+ + Q P LGDIP G LF+ + + Sbjct: 428 LALSSIRESDSIVRAESGQVIVIGGLMKSSDSDTQAKTPGLGDIPGVGNLFKQKRQAGSK 487 Query: 398 RELVVFITPRLVSSE 412 ELV+ + P L + + Sbjct: 488 TELVIMLRPVLANHD 502 >UniRef50_C6C305 General secretion pathway protein D n=1 Tax=Dickeya dadantii Ech703 RepID=C6C305_DICDC Length = 714 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 27/289 (9%) Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 M +TN L++ + LEQ + Q+D+ QV + A I + + LG++W Sbjct: 371 MRAHDQTNSLIITAPPDIMRDLEQVINQLDIRRPQVLVEAIIAEVQDADGLNLGIQW--- 427 Query: 206 DAQHAGGVGQVTTLGSDLSVA-----------TATTHVGFNIGRING-------RLLDLE 247 A G+ Q T G +S A T T++ +G NG + Sbjct: 428 -ANKRAGMTQYTNTGMPISTAIVGVDQYRDDGTLTSNFSSALGSFNGIAAGFYHGNWSML 486 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLG 303 L+AL + D++A+P ++ A+ G E+P Q +S ++ ++VE K + Sbjct: 487 LTALSSNSKNDVLATPSIVTIDNMEATFNVGQEVPVLTGSQTTSADNIYSTVERKTVGIK 546 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGG 362 ++V P + + + L++ + ++ + + + V V +GET+ +GG Sbjct: 547 LKVKPQINEGDSVLLQIEQEVSSVADSSSSTSSDLGATFNTRTVNNAVMVTNGETVVVGG 606 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + VPLLGDIP G LFR +R L++F+ P ++ Sbjct: 607 LLNKSTVETDSKVPLLGDIPVLGNLFRSKSLTVSKRNLMLFLRPTIIRD 655 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 68/182 (37%), Gaps = 6/182 (3%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MK+W L L+ + + + + + + +++ +++ P V GT+++ Sbjct: 7 MKRWGWLGLTALLISSTYSWSAEFSASFKGTDIQEFINTVSKNLNKTVIIDPTVRGTITV 66 Query: 61 H----LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + + + Q +V+ G N + + + + A + Sbjct: 67 RSYDMMNEEQYYQFFLSVLDVYGFSVVPMDNGVLKVIRSKDAKSSSIPVANDEQPGVGDE 126 Query: 117 LENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 L R + L A +LA +L + GS+ + +N LL+ + L + V+ + Sbjct: 127 LVTRVVPLNNVAARDLAPLLRQLNDNAGAGSVVHYEPSNVLLMTGRAAVVKRLMEIVSTV 186 Query: 175 DL 176 D Sbjct: 187 DK 188 Score = 43.3 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 52/145 (35%), Gaps = 16/145 (11%) Query: 50 VSPDVSGTVSLHLTDVPWKQA---LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEA 106 V ++ V + L +V + L+ + +AG + +V + + + R Sbjct: 123 VGDELVTRV-VPLNNVAARDLAPLLRQLNDNAGAGSVVHYEPSNVLLMTGRAAVVKRLME 181 Query: 107 EQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK----------GSMTVDKRTNRLL 156 + +I L YA A ++AK L ++ D RTN ++ Sbjct: 182 IVSTVDKTGDRNVVTIPLTYASADDVAKLVNDLNKTDEKNALPSTMVANVVADSRTNSVV 241 Query: 157 LRDNKTALSALEQWVAQMDLPVGQV 181 + A + + + Q+D QV Sbjct: 242 VSGEDNARQRVVEMIHQLD--RKQV 264 >UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMF5_AGRRK Length = 714 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 66/278 (23%), Positives = 128/278 (46%), Gaps = 15/278 (5%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S S+ D N LL+ + +EQ + Q+D+ QV + A I + + G+ Sbjct: 405 STHTSVVADVENNALLISTTQREYEHIEQILKQLDVMPTQVLIEAVIAEVTLNDQLKFGL 464 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDII 260 +W + + G+ ++ +T + GF + L+AL ++I+ Sbjct: 465 RWFFENGKFGVGLSDLS------DGSTGASFPGFAW-TFASSNVGATLNALSSITNVNIV 517 Query: 261 ASPRLLASHLQPASIKQGSEIPY-------QVSSGESGATSVEFKEAVLGMEVTPTVLQK 313 ++P L+A + Q A+++ G ++P SS + +S++ K+ + + V P V Sbjct: 518 SAPTLMALNNQKATLQVGDQVPIVTQQSASTTSSNTAIVSSIDLKDTGVILTVLPRVNSS 577 Query: 314 GRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 GR+ L + + + + I ++++ T+V V E++ALGG+ + N Sbjct: 578 GRVMLDIQQEVSNV-VKTTTSGIDSPTIQQRKLSTKVIVDDNESVALGGLIQQSNTLNHS 636 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VP+LG +P FG F++ + EL++FI PR+V Sbjct: 637 QVPILGKMPIFGNAFKNKEDTINKTELIIFIKPRIVRD 674 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 6/157 (3%) Query: 25 TLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS----AG 79 TL + D P++ + L + K++ VV P V+G V+L + + AL +++S G Sbjct: 94 TLNLVDAPISAAAKSILGDILKVSYVVDPRVNGKVTLQTSQPVSRDALVDILESALAVNG 153 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 ++G+ + I + A + + + I L++ A E+ E + Sbjct: 154 AAIVRKGDSYQIVPIGNSFSTTPAVTVPSA-TPSGPGVRVQVIELRFIGAEEMKSILEPI 212 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + D N L+L + LSA+ +A D+ Sbjct: 213 SRPGSILRADTARNLLMLAGSNADLSAMRDAIATFDV 249 >UniRef50_Q2S975 Type II secretory pathway, component PulD n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S975_HAHCH Length = 561 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 95/473 (20%), Positives = 181/473 (38%), Gaps = 68/473 (14%) Query: 8 LLLMLIPGVQAAK----PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLT 63 ++ L+P + AA+ ++ + V++ P L + N+VV P V G VSL L Sbjct: 65 VMQALLPTMPAAETMQAAERFDITVNNAPARDFFMGLVKGTGYNMVVHPAVEGAVSLDLK 124 Query: 64 DVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSIT 123 +V + ++ V + G +++GN+ V Q R A+ + + Sbjct: 125 NVTLDEVMEIVQQLYGFEYQRKGNLFKVLPGGVQTRIFQINYLNVKRKGASDIMVSSGQL 184 Query: 124 ----------------------------------LQYADAGELAKAGEKLLSAKG----- 144 D+ E L++ G Sbjct: 185 SNSSGSSSSSSSNNNSNNNSNNSGGGVNAVLSRITTQTDSDFWTALQETLITIVGNEEGR 244 Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMD-LPVGQVELSAHIVTINEKSLRELGVKWT 203 + + +++R + L+A+E+++ + + QV L I+ + E GV W+ Sbjct: 245 KVVTNGGAGIVVVRATPSELTAVEEYLDKAQLVMQRQVILEVKILEVVLNKGFEQGVNWS 304 Query: 204 LADA-----QHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 D +G + TLG T G + L L ++ + Sbjct: 305 YFDEFTSKVDASGDPTKSLTLGQTSRSVTNPGLEGVFSAALRINDFTTLLQLLGEQGTVQ 364 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS----------VEFKEA--VLGMEV 306 +++SPR+ + Q A IK G + + + AT+ VE + ++V Sbjct: 365 VLSSPRISTINNQKAVIKVGDDEFFVTGIETNDATTTSGTSNLISEVEITPFFSGIALDV 424 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQ----ADGEVLAI---DKQEIETQVEVKSGETLA 359 TP + + G + L +H + + + A+ VL + +E ++ ++ ++G+ + Sbjct: 425 TPQIGENGDVTLHVHPTVSDVEDQTKTISLGANDLVLPLAFSSVRETDSVIKARNGQVVV 484 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 +GG+ + Q VPLLGDIP G FR + + ELV+ I P + SE Sbjct: 485 IGGLIRNLTEKTQAKVPLLGDIPLLGHAFRQKRDTELKSELVILIRPIIADSE 537 >UniRef50_C2LEH3 Competence protein E n=3 Tax=Proteus RepID=C2LEH3_PROMI Length = 371 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 140/332 (42%), Positives = 191/332 (57%), Gaps = 25/332 (7%) Query: 101 IARQEAEQARAQANLPLENRSITLQYADAGELAKAGE----KLLSAKGSMTVDKRTNRLL 156 I + + + N L +R LQYAD +A+ LLS G + +DK +N L Sbjct: 42 IDKTDNSETLQHQNSTLHHRIYPLQYADVTTVAQQLTNYGISLLSDHGRIAIDKDSNSLS 101 Query: 157 LRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG--GVG 214 + D + A + + W+ + P QV ++AHI++ ++ +L ELG +W L + + A G Sbjct: 102 IIDTEKAHTEISDWLKIKETPQQQVHITAHIISSSQDALNELGTQWGLLNMKSANLEGTS 161 Query: 215 QVTTLGSDLSVATATTH-----------------VGFNIGRINGRLLDLELSALEQKQQL 257 TT +++ A T + FNI RIN RLL+LELSALEQ++QL Sbjct: 162 NNTTTPHNIASAPLTAPSLAALALHQKTKNPLHYIAFNIARINSRLLELELSALEQEKQL 221 Query: 258 DIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIR 317 IIASPRL A+H + ASIKQG+EIPY S ++ VEFKEAVLGMEVTP + + +IR Sbjct: 222 AIIASPRLTAAHEKTASIKQGTEIPYV--SRDNDTIRVEFKEAVLGMEVTPIIQRSNKIR 279 Query: 318 LKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 L L ISQN PG L Q E L+IDKQEI T+V + GETL LGGIF +K + +P Sbjct: 280 LLLKISQNTPGIALVQGGSEHLSIDKQEIMTEVTIHDGETLMLGGIFQQKQQQHAAKIPF 339 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 L +P G LF H + R ELV+FITP+L+ Sbjct: 340 LSSLPLLGILFSHKRDQHSRHELVIFITPKLI 371 >UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE34_DESAA Length = 716 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 85/369 (23%), Positives = 156/369 (42%), Gaps = 46/369 (12%) Query: 87 NILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL------- 139 N L + + I + Q + + + LQ A A E+ K + L Sbjct: 290 NSLIILASKDDTEAILSFVELLDKEQPTGEGKIQVVYLQNATAEEVVKVLQALPGKQTDT 349 Query: 140 --------LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +S ++ DK TN +++ +K L+ + ++D+P V + A I+ ++ Sbjct: 350 KNKAEAPVVSKDVQISADKATNSIIIVADKEDFKVLKDVIEKLDIPRSMVYIEALIMEVS 409 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVT----------------TLGSDLSVATATTHVGFN 235 ELGV+W L D G V ++++ A F+ Sbjct: 410 TDKAFELGVEWRLGDNFEVNGDQAVGWAGSGGAGSEGAYTLFPTTAEIASGVAGFPTAFS 469 Query: 236 IGRINGRL---------LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 +G I + L + A + + I+++P +LA++ + + I G +PY Sbjct: 470 MGVIGENIKIGDIYFPTLGAVMRAYKNDSDVHILSAPHILATNNEESEIYVGKNVPYVTR 529 Query: 287 SGESGA----TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID 342 S + TS E+++ + +++TP + Q+ +RL + Q V + Sbjct: 530 QDTSSSSVDYTSYEYRDVGVTLKITPQISQERLVRLDVF--QEVTRLIETAGTTTQPTTY 587 Query: 343 KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 402 K++ +T V VK G T+ +GG+ + G VP LGDIPW G FR ++ E+ L V Sbjct: 588 KRKADTTVIVKDGNTIVIGGLIDESTEGGTYKVPCLGDIPWLGWAFRSKTEKREKTNLYV 647 Query: 403 FITPRLVSS 411 F+TPR++ + Sbjct: 648 FLTPRIIQT 656 Score = 91.4 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 65/157 (41%), Gaps = 4/157 (2%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS-LHLTDVPWKQALQT---VVKSAG 79 + + +D +A+ ++ ++E N V+ V G ++ + V +A Q V++ G Sbjct: 68 IQIDFEDAEIAEFVKYISEVTGKNFVLDSKVRGKITIMSPKKVTPDEAYQVFLSVLEVYG 127 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 T + G++ V R + + I++ +A ++ K + + Sbjct: 128 YATVKVGSLTKVVPAPDAKTKNPETRLFDHRISETDKVVTQLISMDFAQVEDVVKLFQPM 187 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 +S + TN L++ D ++ + L + + +D+ Sbjct: 188 VSKGSLLVAYSPTNTLIVTDVESNIQRLVKILKAIDV 224 >UniRef50_B3E8S0 Type II and III secretion system protein n=2 Tax=Geobacter lovleyi SZ RepID=B3E8S0_GEOLS Length = 792 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 84/419 (20%), Positives = 179/419 (42%), Gaps = 36/419 (8%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG-TVSLHLTDVPWKQALQTV 74 +Q + +TL + + ++ + +N V PD +L L + ++QAL + Sbjct: 182 LQLTSVKPLTLKANGTRLKELFSTITRHSGINFVFDPDFKDQPATLTLENSGFRQALDLL 241 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 + I I Q AE+ + ++ L R+ L + DA + A Sbjct: 242 AALHRIDYAV---------INESTVLIYPQSAEKTKQYQDMQL--RTFHLNHLDAKKAAN 290 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +L + + +++ N L++RD +E+ + DLP +V L ++ I++K+ Sbjct: 291 LIRTMLQVR-RLYINEDANALVVRDTSDVTDVIEKILEAHDLPEAEVVLDVEVIEISDKN 349 Query: 195 LRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHV-------------GFNIGRING 241 +G+ + D Q L + L T+TT F+I G Sbjct: 350 AHNVGLLLSNYDVQLGAFSPSNELLATTLKDTTSTTSTTVTTDATIKNLVKAFSINSFGG 409 Query: 242 RLL--DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES----GATSV 295 + + + + + +++++P++ + + A G+ +P ++ + +V Sbjct: 410 YVTVPNAQYNFGKTLANGEVLSNPKIRVKNKEKAKFNVGTRVPITTTTMATTGTTSQVNV 469 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKL--HISQNVPGQVLQQADG--EVLAIDKQEIETQVE 351 ++ + + + PT+ + +KL +S + + + D V+ I + ++T + Sbjct: 470 QYVDVGVKVNAEPTIQLNNEVSIKLGLEVSSIISRETVGGKDSATTVVTIGTRNLDTVLS 529 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +K GET +GG+ + N + + LLGDIP G L + ++++ EL++ ITPRLV Sbjct: 530 LKDGETSVIGGLISHSNSDSKQKIFLLGDIPLIGPLLSNSKTDNDKTELILAITPRLVR 588 >UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Comamonadaceae RepID=A1TKM7_ACIAC Length = 810 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 76/308 (24%), Positives = 130/308 (42%), Gaps = 38/308 (12%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S G + D TN L++ + L + Q+D QV + + IV + + + G+ Sbjct: 406 STGGQIQADPSTNSLIISAPEPQFRQLRAVIDQLDGRRAQVLVESLIVEVAANKVADFGI 465 Query: 201 KWTLADAQHAGGV-------------------------GQVTTLGSDLSVATATTHVGFN 235 +W + G G V+ + S LS + A G N Sbjct: 466 QWQGVMGNYGNGTIGVIGTNSTASGGANILNLALAAASGSVSGVTSALSASGARPGNGLN 525 Query: 236 IG---RINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 + RING L + LE +++++P LL + A I G+ +P+ S + Sbjct: 526 VAIAPRINGNYYLGALANFLENTGDANVLSTPNLLTLDNEEAQIIIGNNVPFVTGSYANS 585 Query: 292 A--------TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 T+VE K+ L + V P + + G ++L L+ + A K Sbjct: 586 TGSSTVNPFTTVERKDVGLMLRVRPQISENGTVKLSLYQEVSQVNDGTANAVNG-PTTSK 644 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 + IE+ V V G + LGG+ + GQD VPL+GD+P G LFR++ + ++ L+VF Sbjct: 645 RSIESTVLVNDGSVIVLGGLLEDRYSMGQDKVPLMGDLPVVGGLFRNENRRRQKTNLMVF 704 Query: 404 ITPRLVSS 411 + P ++ Sbjct: 705 LRPVVIRD 712 Score = 78.3 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 7/163 (4%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-HLTDVPWKQALQTVV---K 76 + VTL + V + +A N+VV P V G ++L VP A Q + + Sbjct: 45 GEPVTLNFAGADIEAVARTMATITGRNVVVDPRVKGQLTLVTERAVPPAAAFQQFLAALR 104 Query: 77 SAGLITRQEGNILSVHSIAW---QNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 G + + V A Q+ ++ + A + + L + +A L Sbjct: 105 LQGFTVVESAGLYKVVPEADAKLQSGSVTVTQGGSGSAPGGGQIVTQIFKLNFENAANLV 164 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 L+S ++ V+ N L++ D L + + VA MD+ Sbjct: 165 PVLRPLISPNNTINVNPGNNSLVITDYADNLQRIARIVAAMDV 207 >UniRef50_Q0A5Z6 General secretion pathway protein D n=2 Tax=Ectothiorhodospiraceae RepID=Q0A5Z6_ALHEH Length = 673 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 86/410 (20%), Positives = 162/410 (39%), Gaps = 52/410 (12%) Query: 50 VSPDVSGTVSLHLTDVPWKQALQTVVKSAGL-ITRQEGNILSVHSI----------AWQN 98 V D G + + + A + V L +EG L V + Q Sbjct: 190 VDRDTEGEI--EVIQLEHAAASEVVRMVRELEDEEREGRRLRVVADERANSVMIAGDRQR 247 Query: 99 NNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE----KLLSAKG---------S 145 + R Q ++ + + L++ADA EL E LL ++G Sbjct: 248 RLLVRALIGQIDSEVAAEGTAQVVYLRFADAEELVPVLEGIGTSLLESRGGNDAGGQGLD 307 Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 + TN L++ L +L + ++D+ QV + A I +++ + ELGV+W + Sbjct: 308 IRAHSSTNALVMNGPADVLRSLRSVLNRLDIRRAQVLVEAVIAEVSQDRVEELGVQWGVL 367 Query: 206 DAQHAGGVGQVT-------------------TLGSDLSVATATTHVGFNIGRINGRL-LD 245 G+ + GS + +G + G + Sbjct: 368 SEDRGVGLINFGGAAGAGGGIADVIRAAGAISDGSTADLPQVGDGAAIGVGDLRGSTQVA 427 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS----SGESGATSVEFKEAV 301 + AL +I+++P L+ + A I G +P+ +S++ ++ Sbjct: 428 ALIRALSGDSASNILSTPSLMTMDNEEAEIVVGQNVPFITGRAIEDSGQAFSSIQRQDVG 487 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 + + + P + + LKL I Q V L D + + T V V++G+ + LG Sbjct: 488 VQLRIRPQINEGD--TLKLEIEQEVSSVSGGIQGAADLVTDLRSVRTSVMVENGQMVVLG 545 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G+ + ++ +VPLLG++P G+LFR+D + E+R L+VF+ P ++ Sbjct: 546 GLIDDQLRTRSQAVPLLGNLPGLGRLFRYDRSQVEKRNLMVFLRPVIIRD 595 Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 7/166 (4%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWK-----QA 70 V A + + +TL D + +V+ ++++ +N +V P V G V++ ++ P Q Sbjct: 29 VLAEEDEGITLNFQDADLREVVALVSQETGVNFIVDPRVRGDVTI-VSQTPVDADGLYQV 87 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 + +K G + + A + + + R+ + + R I + + +A Sbjct: 88 FLSALKIHGFAAVPTPEAVRIIPRAQARQDRIPSDGDTTRSLGDQAV-TRVIRVDHVNAA 146 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 EL L+ G + N L++ D + LE + ++D Sbjct: 147 ELVPVLRPLVPQDGHLAAYSPANSLIISDTAANVDRLEVLIGRVDR 192 >UniRef50_Q0VSG7 General (Type II) secretion pathway protein D n=2 Tax=Alcanivorax RepID=Q0VSG7_ALCBS Length = 710 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 74/352 (21%), Positives = 143/352 (40%), Gaps = 48/352 (13%) Query: 104 QEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA--------------------K 143 Q + + I L + DA +A+ + + + Sbjct: 269 QMVRSLDTEETNNSGAKVIRLSHGDAKSMAELLKNFVDGASVNRAGGDGKTTSVALNNNE 328 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 S+ D+ N L++R + ++ ++++D+ Q+ + A IV I+ + + LG ++ Sbjct: 329 VSIQADESLNALVVRAKPAMMKQIQSVISKLDVRRAQILIEAAIVEISGEQGKNLGFQY- 387 Query: 204 LADAQHAGGVGQVTTLGSDLSVAT------ATTHVGFNIGRINGRLLD-----------L 246 + GVG V G+ LSV + + G ++G L Sbjct: 388 -VGGSNEDGVGAVNFGGNGLSVNSVVQALASDDPSGLSLGDGITAGLGETDSDGDLKWGA 446 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKE 299 + AL ++++++P +L + ASI G +P+ + T+++ ++ Sbjct: 447 LIQALSTSSDVNLLSTPSILTLDNEEASIIVGENVPFVTGQSTNTGSGVSNPFTTIQRED 506 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 L ++VTP V IRL+L Q D + +++++ V ET+A Sbjct: 507 VGLTLKVTPHVAGLSTIRLEL--EQESSAVKDSAGDAVDIVTTTRKLQSTVLADDAETIA 564 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 LGG+ + VP LGDIP G LFR K+ + L+VF+ P ++ + Sbjct: 565 LGGLIKDDIRVTVRKVPFLGDIPVLGFLFRSTSKDRVKSNLMVFLKPTILGN 616 Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 76/212 (35%), Gaps = 11/212 (5%) Query: 25 TLMVDDVPVAQVLQALAEQEKLNLVVSP-----DVSGTVSLHLTDVPWKQALQTVVKSAG 79 T+ + + + + +A+ N VV P DV+ + LT + +V++ G Sbjct: 48 TVNIRNADIQAFISQVAQMTGKNFVVDPRVRARDVTVVSTKSLTSNEVYELFLSVLQVHG 107 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 G+I + + + + + L R I ++ EL L Sbjct: 108 YAAVSVGDITKIVPNTTAKQS--NLPLVEKGSSSGEELVTRVIAVESTPVEELVPVLRPL 165 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 + G + N L++ D+ + +E ++ +D + ++ + ++ Sbjct: 166 VPQYGHLAAVGSANALIISDHLDNIRRMEAIISSLDSAESE---DVQVLKLKHAFAGDM- 221 Query: 200 VKWTLADAQHAGGVGQVTTLGSDLSVATATTH 231 VK + GG G + G + VA T+ Sbjct: 222 VKMLESLTPQTGGRGGKSAEGGVIVVADERTN 253 >UniRef50_A4SUZ8 Type II and III secretion system protein n=2 Tax=Polynucleobacter necessarius RepID=A4SUZ8_POLSQ Length = 353 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 103/392 (26%), Positives = 179/392 (45%), Gaps = 69/392 (17%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 ++L D+ VA++LQ LA+ N ++S + G +S+ L + PW+ AL +++ S GL Sbjct: 24 ISLQFVDIEVAELLQVLAKLGHTNFLLSESIKGKISVDLNNTPWQTALHSILASRGLRLV 83 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 + G+I + A IA + + R + LP I Sbjct: 84 RNGDIYWIGPHA----EIAAFQKYR-REDSALPFGGDHIN-------------------- 118 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 + + + +E + + D RELGVK Sbjct: 119 ----------------SPSQI-LIEARIVEADER----------------FARELGVKIG 145 Query: 204 -----LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 + G+ L+ T + + RLL +ELSALE + Q Sbjct: 146 QQANLAGSRTDKKISANLDLGGAGLNGFNPATVAATLLSKDASRLLQMELSALESEGQGK 205 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRL 318 I+++PR++ A+I+QG+E+PYQ +S + ++F++A L +EV P + G+I + Sbjct: 206 ILSNPRIMTGDQVKATIEQGTELPYQTTS--QNGSKLQFRKANLRLEVLPKIHPDGKISM 263 Query: 319 KLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLL 378 + I+++ G +Q AID + + ++V V++G T +GGI+ + + +PLL Sbjct: 264 LVGINKDTIGMKTEQG----YAIDTKSLSSEVTVENGGTAIIGGIYQTTEREDEVKIPLL 319 Query: 379 GDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 GDIP FG LFRH K ++ EL+VF+TP ++ Sbjct: 320 GDIPLFGHLFRHKSKLKDKTELLVFLTPTVLD 351 >UniRef50_B0T7N8 General secretion pathway protein D n=1 Tax=Caulobacter sp. K31 RepID=B0T7N8_CAUSK Length = 681 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 70/329 (21%), Positives = 138/329 (41%), Gaps = 13/329 (3%) Query: 86 GNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGS 145 G S + + R E A + P +++ Q A + + Sbjct: 336 GGGSSAAAPGGNRPALDRLGVEAAASPLLAPSNGQTLPGQ--SPAPAAPDMAGGPADGLT 393 Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 T D+ N ++ + +E + ++D+ QV + A + ++ G +W + Sbjct: 394 FTSDETNNAVVAYATPREYALIEDALRKLDVVPLQVVIEAVVTEVSLNDALRYGSQWFIR 453 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRL 265 L + A+T GF +N + L AL ++++++P L Sbjct: 454 SGDDR------AILSRGKTADPASTFPGFTY-LLNRSSIAATLDALSSVTHVEVLSAPNL 506 Query: 266 LASHLQPASIKQGSEIPYQVSS---GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHI 322 + + Q AS++ G ++P S S +S+E+++ + +++TP V G + L + Sbjct: 507 MVLNNQTASLEVGDQVPVSTGSALNSSSVISSIEYRDTGVLLKITPRVNSGGLVLLDIAQ 566 Query: 323 SQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIP 382 + L + + I ++I T + V+ G+T+ALGG+ NK ++ VP L +P Sbjct: 567 EVSDVSPTLS-STIDSPTISVRKIATSIAVQDGQTVALGGLIRDNNKRLRNGVPFLSAVP 625 Query: 383 WFGQLFRHDGKEDERRELVVFITPRLVSS 411 G L ER EL+V +TPR++ + Sbjct: 626 VLGALAGSRDNSRERTELLVLLTPRVLRN 654 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 63/160 (39%), Gaps = 14/160 (8%) Query: 23 KVTLMVDDVPVAQVLQA-LAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQALQTVVKS 77 V L V V + QA L + L VS SGTV+L + A++ +++ Sbjct: 79 PVALNFPGVGVREFAQAVLGDILHLPYAVSAAASGTVTLVTPRPIARADVLPAVEEALRN 138 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP-LENRSITLQYADAGELAKAG 136 GL + ++ ++ A+ A+ P + ++ L++A L Sbjct: 139 VGLALVSRDGVQTIMTLGDA-------RAQGLTVGADQPGFGSETVALRFAGPQALKTLL 191 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + ++ + + D TN L+L + A+ V Q D+ Sbjct: 192 DPIVPGVIT-SADPATNTLVLSGSAGQRRAVRDLVQQFDV 230 >UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLP8_9BURK Length = 807 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 80/309 (25%), Positives = 145/309 (46%), Gaps = 32/309 (10%) Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 A +G L+ G + D TN L++ + L + ++D+ QV + + IV ++ Sbjct: 388 AASGNVDLNNGGIVQADPSTNSLIITAPEPIYRNLRSIIEKLDVRRAQVFVESLIVEVST 447 Query: 193 KSLRELGVKWTLADAQHAGGV-----GQVTTLGSDLSVATATTHVG-----FNIGRINGR 242 E G+++ A GV GS ++ A T++G NIG I+G+ Sbjct: 448 DKAAEFGIQFQGLSGVGADGVRVIGGTNFNDPGSGSNILGAATNLGSVGRGLNIGVIDGQ 507 Query: 243 L----------LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS----SG 288 + L ALE K +I+++P +L + A I G +P+ SG Sbjct: 508 VNIPGIGTISNLGFLARALESKANANILSTPNILTLDNEEAKIVIGQNVPFITGQFTNSG 567 Query: 289 ESGAT-----SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 +GAT ++E ++ L + V P V + G ++L + + V+ + + +K Sbjct: 568 GNGATVNPFQTIERQDVGLTLRVKPQVSEGGIVKLGIFQEVSS---VVDSTNVSGIITNK 624 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 + IE+ V V++G + LGG+ + ++ VP LGD+P GQ FR+D + ++ L+VF Sbjct: 625 RSIESNVLVETGNIIVLGGLVEDRVTGNEEKVPGLGDVPVLGQFFRYDNRRRQKTNLMVF 684 Query: 404 ITPRLVSSE 412 + P +V +E Sbjct: 685 LRPVVVRNE 693 Score = 91.4 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 4/166 (2%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQAL 71 VQ ++ K L + + V++A+ VV P V GT+SL L+ K AL Sbjct: 53 VQNSQEDKFALNFVNADIDAVVRAIGSFTNQTFVVDPRVRGTISLVSPEPLSAADAKNAL 112 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 ++ G + G I V + +A Q+ + + L Y A Sbjct: 113 LAALRLQGFTIVESGGIARVLPENDAKVQADSVDPRKAMNQSGNAIVTQVFQLNYESATA 172 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 L L++ ++ N L++ D L + + +A +D P Sbjct: 173 LVPVLRPLIAPNNTIAAYPNNNTLVITDYADNLQRIARIIASIDGP 218 Score = 41.7 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 14/101 (13%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA----------- 142 I +N+ R A + + L++A A +LA ++L Sbjct: 198 ITDYADNLQRIARIIASIDGPYSGDLEVVPLEHALAVDLAAILGRMLDEGNRGTGAAVDA 257 Query: 143 --KGSMTVDKRTNRLLLRDN-KTALSALEQWVAQMDLPVGQ 180 + S+ D RTN LLLR K L+ + +A++D P Q Sbjct: 258 GQRLSVMADPRTNSLLLRTPSKARLNLAKALIAKLDQPTKQ 298 >UniRef50_A1U289 General secretion pathway protein D n=4 Tax=Gammaproteobacteria RepID=A1U289_MARAV Length = 649 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 81/366 (22%), Positives = 154/366 (42%), Gaps = 49/366 (13%) Query: 92 HSIAWQNNNIARQEAEQARAQANLPL----ENRSITLQYADAGELAKAGEKLLSAKG--- 144 + + + + R + Q + P + I L++ADA L + + ++ Sbjct: 237 NRLILRGDETFRDKMRGLILQLDQPSASGGTTKVIRLRHADAKTLTEILKGVMGEVVKEG 296 Query: 145 -----------------SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 S+ D+ N L++R + + + EQ VAQ+D+ QV + A I Sbjct: 297 SAGGSSGGSAGNPGSSFSVFADEGLNALVVRGDPSLMQEAEQIVAQLDVRRAQVMIEAAI 356 Query: 188 VTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI-------- 239 V I+++ +LGV+ D T L S + + +G +G Sbjct: 357 VEISDELGDQLGVQLAAGDESAGSFPVLGTNLTSGQGMVGLNSVIGALVGDTIPQLAGGL 416 Query: 240 ---------NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES 290 +G L + AL +++++P ++ Q + I G +P++ Sbjct: 417 TVGAGQRDEDGVTWGLLIQALSSSSAANLLSTPSIITLDNQESEIIVGQNVPFRTGQSTV 476 Query: 291 GA-------TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 T++E ++ L ++VTPT+ G +RL + + +++ +K Sbjct: 477 TGDGTTNPFTTIERRDVGLSLKVTPTISADGLVRLVVEQTTEDISTTSVDGASDLIT-NK 535 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 +EI+T V GET+ LGG+ + + VPLLGDIP G+LF + + +R L+VF Sbjct: 536 REIKTTVLADDGETVVLGGLIKDDYQVSKSKVPLLGDIPVLGRLFSSESETRVKRNLLVF 595 Query: 404 ITPRLV 409 + P ++ Sbjct: 596 LRPTIM 601 Score = 79.9 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 14/162 (8%) Query: 26 LMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWK-----QALQTVVKSAGL 80 L + D + + +A+ + VV P V G V++ L+ P V+ G Sbjct: 33 LNLKDADIRAFVTQVADITGYSFVVDPRVKGKVTV-LSSAPMNKDEIYDLFLAVLNVHGF 91 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP---LENRSITLQYADAGELAKAGE 137 ++ + A+Q AE P L R I + A+A EL Sbjct: 92 TAIPGEEVVKI-----VQQVDAKQSAENLNRFPQTPSEQLITRVIQIDNANALELVPILR 146 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 L++ G + N L++ D+ + ++ +EQ V ++D P Sbjct: 147 PLVAKYGHLAGVAAANALIVSDHASNIARIEQIVRELDSPSK 188 >UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V9I3_SPHWW Length = 682 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 71/293 (24%), Positives = 132/293 (45%), Gaps = 20/293 (6%) Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 + + ++ N ++LR A++ +E +AQ+D+ QV + A IV I+ Sbjct: 347 KGFSTPDLTVQPAPELNAIVLRGTPAAIAEVEPLIAQLDVRRPQVLIEAAIVEISGDQAE 406 Query: 197 ELGVKWTLADA---QHAGGVGQVTTLGSDL---------SVATATTHVGFNIGRINGRLL 244 +L V+ + A + +GG T+ G L A A G + G Sbjct: 407 QLAVQLGIGAAAINRASGGATSFTSPGLPLQSILTAIGSPAAGAVLSNGGSANIRFGDNF 466 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA------TSVEFK 298 + L A+ Q + +++++P L +PA I G +P++ S + T++E + Sbjct: 467 SILLQAIGQSTRSNLLSTPSLTTLDNEPAEIVVGQNVPFRTGSFSTDGNTINPFTTIERQ 526 Query: 299 EAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETL 358 + L + V P + Q +RL++ + + A L +++ I+T V G+T+ Sbjct: 527 DVGLTLRVVPRIHQGNVVRLEVAQEVSSLTNAVTGAAD--LITNRRSIQTSVLADDGQTI 584 Query: 359 ALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 LGG+ + + VP+LGDIP G+LFR + +R L VF+ P ++ Sbjct: 585 VLGGLISDDRTQTRSQVPILGDIPIAGELFRSRKESHVKRTLFVFLKPTILRD 637 Score = 71.0 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 13/169 (7%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS------LHLTDVP 66 I A++ V + + V +A V + ++ L++ P V GTV+ L + V Sbjct: 22 ILAQGASQAADVVVNMRAVDIADVAEQISRITGRTLILDPAVKGTVNVTSAEPLSVDGV- 80 Query: 67 WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 W Q+V++ G + G + A A ++A + + R + LQ Sbjct: 81 WD-LFQSVLRVHGFAAVKSGRSWRIIPQAS-----AIRDAGSGGRLSGQDVTTRMVRLQN 134 Query: 127 ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + A+ L++ GS+ N +++ D + +E +D Sbjct: 135 VSGEQAARVFRPLVAQFGSIEAMASPNAIIVTDYAENVRRIESLARALD 183 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 79/207 (38%), Gaps = 17/207 (8%) Query: 51 SPDVSGTVSLHLTDVPWKQALQTVV-KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQA 109 DV+ + + L +V +QA + A + + + + N+ R E+ Sbjct: 122 GQDVTTRM-VRLQNVSGEQAARVFRPLVAQFGSIEAMASPNAIIVTDYAENVRRIESLAR 180 Query: 110 RAQANLPLENRSITLQYADAGELAKAGEKLL-----SAKGSMTVDKRTNRLLLRDNKTAL 164 + SITL+YA+A ++A A + ++ + + D+R+N +L+R + Sbjct: 181 ALDSGGGGRFDSITLRYANAKDVAAAIQGVMGDGTATGGPRVVADERSNIVLVRGEPAMV 240 Query: 165 SALEQWVAQMDLPVGQVELSAHIVTINEKSLRE--------LGVKWTLADAQHAGGVGQV 216 S + +D P V ++ ++ +N LG + T+ + G Sbjct: 241 SEARRLAHTIDKPGAGVPIT-RMIRLNNGDAESVTEVLQGVLGEQGTVTNPAARAVAGGR 299 Query: 217 TTLGSDLSVATATTHVGFNIGRINGRL 243 + S A A G ++G L Sbjct: 300 ARITRQQSNAGAQA-AGLSLGSTPATL 325 >UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pseudomonas RepID=GSPD_PSEAE Length = 658 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 82/341 (24%), Positives = 143/341 (41%), Gaps = 33/341 (9%) Query: 104 QEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGS------------------ 145 Q A+ R I L++ DA LA+ ++ + Sbjct: 266 QLAQSLDTPTARSANTRVIRLRHNDAKTLAETLGQISEGMKNNGGQGGEQTGGGRPSNIL 325 Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 + D+ TN L+L + ++ALE V Q+D+P QV + A IV I+ +GV+W + Sbjct: 326 IRADESTNALVLLADPDTVNALEDIVRQLDVPRAQVLVEAAIVEISGDIQDAVGVQWAIN 385 Query: 206 DAQHAGGVGQVTTLGSDL--------SVATATTHVGFNIGRINGRLLDLELSALEQKQQL 257 G G + S + I I ++AL + Sbjct: 386 KGGMGGTKTNFANTGLSIGTLLQSLESNKAPESIPDGAIVGIGSSSFGALVTALSANTKS 445 Query: 258 DIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKEAVLGMEVTPTV 310 +++++P LL Q A I G +P+Q S + + T+VE K+ + ++VTP + Sbjct: 446 NLLSTPSLLTLDNQKAEILVGQNVPFQTGSYTTNSEGSSNPFTTVERKDIGVSLKVTPHI 505 Query: 311 LQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKS 370 +RL++ + QQ + L K+ I++ + ++G+ + +GG+ Sbjct: 506 NDGAALRLEIEQEISALLPNAQQRNNTDLITSKRSIKSTILAENGQVIVIGGLIQDDVSQ 565 Query: 371 GQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + VPLLGDIP G+LFR +R L+VF+ P +V Sbjct: 566 AESKVPLLGDIPLLGRLFRSTKDTHTKRNLMVFLRPTVVRD 606 Score = 82.2 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 10/156 (6%) Query: 25 TLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQALQTVVKSAGL 80 T+ + D + + + ++E VV P V G VS+ L+ Q +V+ + G Sbjct: 54 TINLKDADIREFIDQISEITGETFVVDPRVKGQVSVVSKAQLSLSEVYQLFLSVMSTHGF 113 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 +G+ + A ++ R LE R I +Q + EL L+ Sbjct: 114 TVVAQGDQARIVPNAEAKTEAGGGQSAPDR------LETRVIQVQQSPVSELIPLIRPLV 167 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 G + N L++ D ++ +E + Q+D Sbjct: 168 PQYGHLAAVPSANALIISDRSANIARIEDVIRQLDQ 203 >UniRef50_B9K747 ComE protein n=6 Tax=Thermotogaceae RepID=B9K747_THENN Length = 1282 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 87/394 (22%), Positives = 166/394 (42%), Gaps = 39/394 (9%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 K+++ ++V + +++ A + ++++ S TV++ + + W++ L V ++ G + Sbjct: 923 KLSIRAENVSLYDLIKEAASEIGVSMMFVDSPSETVTMRVDGITWEKFLDLVSQNYGYLF 982 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA 142 + + V L R + ++ E Sbjct: 983 DLKNGVYVVSRPK-------------------QDLAKRYFYDIPHNFDQIKALIEFY--- 1020 Query: 143 KGSMTVDKRTNRLLLRDNKTALS-ALEQWVAQMDLPVGQVELSAHIVTINEKS--LRELG 199 G++ VD N +++ + L++ V + P QVE+SA IV + +E+G Sbjct: 1021 GGTVYVDSLNNFMVVTGISETIKKELDRIVENLKKPTKQVEISAKIVDKSLIDMVTKEMG 1080 Query: 200 VKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFN--IGRINGRLLDLELSALEQKQQL 257 ++ + G G + + T ++ F I I L L+ S + Sbjct: 1081 LQLS--------GTGVDLSSSGASISFSVTDYLDFEKVINEILNSPLSLQFSDQKSNTLD 1132 Query: 258 DIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIR 317 DI+ASPR++ + + A I G IPY + G V+F E + + +TP V I Sbjct: 1133 DILASPRIVTTSGKEAKILIGDRIPYVTDTNGDGTPEVQFLETGIELSITPFVRSDDTIE 1192 Query: 318 LKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 L L + + PG + EV +E T + VK+ T+ +GG+ + +P Sbjct: 1193 LDLFVKASEPGNYI----NEVPGERTREATTHLIVKNNSTIVIGGLIREVTNMSESKLPF 1248 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 GD+P GQ FR + E+R+L++F+T R+V Sbjct: 1249 FGDLPVIGQFFRTKSESKEKRDLMIFVTVRVVEP 1282 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 61/156 (39%), Gaps = 16/156 (10%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS-GTVSLHLTDVPWKQALQTVVK 76 +++ + +++P +++ LAE+ LN++VS V T SL L +V + AL+ ++ Sbjct: 121 PRSKERIDVSFENMPFEDMVKYLAERLDLNVIVSESVKNATTSLKLNNVTPEDALRDLLV 180 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + G V + + + + E+ + R + + +A Sbjct: 181 TFG----------EVAYAYFPDGTMFIGKYEEVSGRFQ-----RFWGIYRVENQSVADRI 225 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVA 172 + L+S + + + L + + ++ Sbjct: 226 KSLISQEAMIDYLPSKSVLFVYGTSEEHDLVASLLS 261 >UniRef50_D0X4T6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X4T6_VIBHA Length = 715 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 80/339 (23%), Positives = 138/339 (40%), Gaps = 44/339 (12%) Query: 106 AEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG--------------------- 144 A+ R L +YA A ++ + KL+ + Sbjct: 368 AQMDRPSQGADLRYFIYQPKYARAADIGDSLSKLIGGRSLSVQKSADKDSSKIEVNSQSS 427 Query: 145 --------SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 S+ VD+R N L+ R + T AL +AQ+D+ QV L I + Sbjct: 428 NSVSNDKLSLVVDERANTLIFRSSSTEYQALLPLIAQLDVMPKQVILEMTIAEVTMTDEF 487 Query: 197 ELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQ 256 + GV+W ++ + A VG + + L A E Sbjct: 488 KFGVEWAFSNGNFSA----------STKDAFGLDKVGGGFIKWMSGDDFINLQAFESNNN 537 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPY---QVSSGESGAT-SVEFKEAVLGMEVTPTVLQ 312 ++I++ P LL A+I G++IP + +G T SVE+++ + + VTPT+ Sbjct: 538 VNIMSKPSLLVRDGVEANINVGTDIPVVGQTTTDSNNGVTRSVEYRKTGVKVAVTPTINA 597 Query: 313 KGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQ 372 +G + + + + +G +I + I T+V +SG+T+ LGG+ + + Sbjct: 598 QGIVSMVISQENSNQVDGGTSVEGN-PSIFDRSITTEVVAESGQTVILGGLISENVTNNG 656 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +VP LG +P G LF + ELV+ +TPR+V S Sbjct: 657 SAVPFLGSLPVVGGLFGTKTDNKTKTELVIMVTPRIVES 695 >UniRef50_A0LPH6 General secretion pathway protein D n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPH6_SYNFM Length = 793 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 16/289 (5%) Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 +S + + D+ N +++R N T + +++ + +D+ V + I + E Sbjct: 480 TSVSPEVMIIPDEVNNAIVVRANATDYAKIKKTIEALDILPRAVLIEVIIAEVALTKDFE 539 Query: 198 LGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGR-------INGRLLDLELSA 250 G+KW + A+ GVGQ + G A G + N + + LS Sbjct: 540 YGLKWYFSHAEVGAGVGQGSLNGLGGVSDIALNLAGISSAGGMALAWVSNAKDMAGVLSW 599 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS--------VEFKEAVL 302 L K ++ I+++P LLA+ + A+I+ G P S G ++ +E++E Sbjct: 600 LSSKTKVKILSTPTLLATDNKEAAIQVGGRTPVPSGSYTGGTSTTLDTVFSTIEYEETGT 659 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA-DGEVLAIDKQEIETQVEVKSGETLALG 361 + VTP + G +RL++ + G + ++ ++T + + G T+ +G Sbjct: 660 ILTVTPHINAGGLVRLEVEQTIRRVGANATVGVNNTAPTFTERNLKTTLLAQDGSTVVIG 719 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 GI ++ P+L D+P G LF GK ER EL++ ITPR+V Sbjct: 720 GIIDEIDRDTTTGAPMLVDVPIIGPLFGQKGKSRERTELLIAITPRVVE 768 Score = 55.2 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 67/178 (37%), Gaps = 8/178 (4%) Query: 16 VQAAKPQKVTLMVDDVPVAQVL-QALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQT 73 V + QKV D + +V Q + KLN V+ P + G +S++L + LQ Sbjct: 105 VGEGERQKVVFNFDKADLGEVTSQVFGDYLKLNYVLDPTLQGRISMYLEGEFNRTELLQM 164 Query: 74 VVKS---AGLITRQEGNILSVHSIAWQNNNIARQEAEQARA--QANLPLENRSITLQYAD 128 ++K+ + + + + + ++ + + L+Y D Sbjct: 165 IIKAFEANNVSITPQKGLYYIQPLQRSASSSLSLADTITLKPDKDGVRPVIVIYKLRYLD 224 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ-VELSA 185 + + ++ + D +N L+ ++ ++ + + MD+ + Q V + Sbjct: 225 VKQALNTVKSFITPGRPLISDTMSNSLIFVESSDNAHSIVEVLRTMDMNILQEVSMEV 282 >UniRef50_Q1JVV5 Type II and III secretion system protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV5_DESAC Length = 665 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 78/380 (20%), Positives = 144/380 (37%), Gaps = 55/380 (14%) Query: 87 NILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS----- 141 N L V + + I AE + L+ ADA EL+K ++LS Sbjct: 254 NRLVVMATSDDMTTILSLIAELDQEPTQEHARINLYYLENADAEELSKTLNEILSGIKKP 313 Query: 142 --------------------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQV 181 +++ DK TN L++ ++ + Q+D+ QV Sbjct: 314 ATSSSAAAGGKGTIPAAAIQTNVTVSADKPTNALVINATPEDYVIIKDIIKQLDIRRKQV 373 Query: 182 ELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT------ATTHVGFN 235 + A I+ ++ + LG + A G+ +++ + + + T+ G Sbjct: 374 YVEALIMELSMDATEALGSQLQGAFEVGNEGIVNLSSNSAPGGILSDPESLLTTSVNGLL 433 Query: 236 IGRINGRL----------------LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 G + + + + ++I+++PRLL S + A I G Sbjct: 434 AGGFSKLIGVDTDGDGVDDSQVTAFSALIKLSKDDTNVNILSAPRLLTSDNEEAEIVVGR 493 Query: 280 EIPYQVSSGESGA--------TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVL 331 +P S SVE K+ L + TP + + +RL ++ + Sbjct: 494 NVPIITSRLTDSTGSDSLAQSVSVERKDVALTLRFTPQITEGELVRLNVYQETTDLTDSV 553 Query: 332 QQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHD 391 + ++I V + G+T+ LGG+ + + VPLLGDIP G LF+ Sbjct: 554 GDVNSVGPTFTTRKISNTVLARDGQTVVLGGLISTNQQETISKVPLLGDIPLLGWLFKSK 613 Query: 392 GKEDERRELVVFITPRLVSS 411 ++ + L+VFITP ++S Sbjct: 614 DNKEVKTNLLVFITPTIISD 633 Score = 81.0 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 63/159 (39%), Gaps = 8/159 (5%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS-LHLTDVPWKQALQT---VVKSAG 79 +TL D+ + +++ ++E N V + G + + + +A Q V+ G Sbjct: 37 ITLDFKDIELTDLIRTVSELTGKNFVYDDSIRGKATIISSQQMSVNEAYQLFLTVLNVKG 96 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 G + I + R I+L+ +A ++A++ Sbjct: 97 YTVVPSGKTNKIVPIKSAKESNLPTMTGNLAQDQ---FVTRMISLENINAADIAESILSP 153 Query: 140 LSAKGS-MTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 L K S + V + +N L++ D+ + + L + ++D+P Sbjct: 154 LMPKTSNVVVYEPSNMLIISDSASNIQRLTTIIRELDVP 192 >UniRef50_O80264 Similar to Gene IV protein :Acc# A04268 n=3 Tax=root RepID=O80264_9VIRU Length = 500 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 84/398 (21%), Positives = 158/398 (39%), Gaps = 47/398 (11%) Query: 30 DVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWK--QALQTVVKSAGLITRQEG 86 D P+A+ ++Q + +V+ V G+VS D VP + +V+++ G ++G Sbjct: 72 DTPIAEFASWYSQQTGIKVVLGQGVLGSVSFTAPDLVPAEYPAFFDSVLRAHGYYLVKDG 131 Query: 87 NILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGS- 145 N + I P + Y +L+ + L A S Sbjct: 132 NAYVIKIAPEAKEVI-------------TPAIVKLYRFNYIRNSKLSDLVQSTLKATSSE 178 Query: 146 -----------MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + + TN L++ L L+ ++ +D+P Q+ + A I Sbjct: 179 FVKDKQVDNYSVEILPNTNALIVSGTAQQLEKLDVLLSAIDVPQRQIFIEAVITETELGD 238 Query: 195 LRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQK 254 ELGV A + G VT L + + N+ + + A+ Sbjct: 239 NSELGVNLQAAFDKA----GFVTNL-------VNASKLKDNLFIFESGDFNALVKAISGS 287 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTV 310 +++ P +L + I G +P+ + G + +E K+ + +EVTP V Sbjct: 288 SDTRLLSRPNILIMDRERGYITVGQNVPFLVSNSTTDGGTSVQRIERKDVGVSLEVTPHV 347 Query: 311 LQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKS 370 + + L ++ + AD + +K+ + T V VKSG+T+ LGG+ + + ++ Sbjct: 348 MGDD-VILVINQESSSVTDSTIAAD---IITNKRTLMTTVAVKSGQTIVLGGLISDEKRN 403 Query: 371 GQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 + VP+L D P G LFR ++ ++EL V I + Sbjct: 404 VESGVPVLKDTPLIGGLFRSTSTKNVQKELRVVIKSTV 441 >UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P193_AZOSE Length = 719 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 33/300 (11%) Query: 143 KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW 202 G + D N L++ + L + +D QV + A I I+ + E G++W Sbjct: 344 GGMIQADPVNNALIIVAPEAIYRNLRHVIDLLDRRRAQVYIEALIAEISTERAAEFGIQW 403 Query: 203 TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRL------------------- 243 A+ AG + NIG + + Sbjct: 404 QSANTPGAGSSSTFFGGTNFGGAGQNIIGAAQNIGSVGKGMNFLLGGGTVKVPINGQMVE 463 Query: 244 ---LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------- 292 L L LE + +I+++P L+ + A I G +P+ + Sbjct: 464 VFNLSLLARFLETDSRTNILSTPSLVTLDNEGAKIVVGRNLPFITGQYTNTGGGTTPANP 523 Query: 293 -TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 ++E ++ L +EV P + + G IRL ++ Q V D +K+ I++ V Sbjct: 524 FQTIERRDVGLTLEVRPQISEGGAIRLDIY--QEASSVVPTLDDSAGPTTNKRSIQSTVL 581 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 V G +ALGG+ SG++ VPLLGDIP+ G LFR+D + + LVVF+ P ++ Sbjct: 582 VDDGAIIALGGLVEDDYSSGEEKVPLLGDIPFAGSLFRYDTRRRTKTNLVVFLRPVILRD 641 Score = 88.0 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 80/206 (38%), Gaps = 11/206 (5%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWK-----QALQ 72 AA+ V+L + + V++A+ + N ++ P V GT+++ +T+ P Q L Sbjct: 25 AAQDDTVSLNFANAEIDAVIKAIGKISGKNFLIDPRVKGTLNI-VTNTPVSRDLSYQILL 83 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 + ++ G + + + A + E R + + L + ++ A ++ Sbjct: 84 SALRLQGYTAVEGPGVTKIVPEADAKLHGVPVGKEVLRGRGD-SLVTQVFAMRNESATQM 142 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 L+S ++T N L++ D ++ + + + +D+P G H++ + Sbjct: 143 LAVVRPLVSPNNTVTAFPSNNVLVVTDYADNVARIARIIDSVDVPQG----DVHVLELRH 198 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTT 218 + +L G T Sbjct: 199 AAAVDLAATLNRLMNDGTGNGSAANT 224 >UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burkholderiales RepID=B1Y329_LEPCP Length = 753 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 122/297 (41%), Gaps = 26/297 (8%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S G + D TN L++ + L + Q+D QV + + IV ++ E G Sbjct: 370 STGGFIQADPATNSLIISAPEPVYRQLRGVIDQLDARRAQVYVESMIVKMDATQAAEFGF 429 Query: 201 KWT------------LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIG---RING-RLL 244 +W +A G + L + A G N+G ING L Sbjct: 430 QWQGLLGQSGDRYGLVAGTNFGTGGNNIVNLSVGAATGAALPGAGLNVGLLKAINGVYTL 489 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT---------SV 295 LE +++++P L+A + A I G +P+ S + T ++ Sbjct: 490 GALARFLESNTGANVLSTPNLIALDNEEAKIVIGQNVPFVTGSFTNTGTSNGSANPFQTI 549 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 E K+ L + V P + + G +R+ ++ + + DK IET V V G Sbjct: 550 ERKDVGLTLRVKPQIGEGGTVRMVIYQENSSV-VANTTTNSAGPTTDKSAIETTVVVDDG 608 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + LGG+ SG+D VP L IP G LFR + ++ + L+VF+ P ++ S+ Sbjct: 609 SIMVLGGLLKDDYGSGEDRVPGLASIPLIGGLFRSENRKRTKSNLLVFLRPVVMRSQ 665 Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 62/162 (38%), Gaps = 7/162 (4%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ---ALQTVVKS 77 + VT+ + V V +A+A ++V P V GT++L+ ++ P Q L + Sbjct: 53 KETVTINFVNAEVEAVSRAMATIVNRQIIVDPRVKGTMTLY-SEQPLTQREAFLNYLAAL 111 Query: 78 AGLITRQEG--NILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 GL +L V A + + + + +Q+ + L Sbjct: 112 RGLGFAVVDVAGLLKVVPEAEAKLQTGTVSVGSVLRKGDQ-IVTQVFKVQHENVNNLVTV 170 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 L++ ++ + N L++ D L L + + +D+P Sbjct: 171 LRPLITPNNTINANPGNNSLVITDYADNLQRLAKIIGALDVP 212 >UniRef50_C0QK68 GspD2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QK68_DESAH Length = 761 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 133/292 (45%), Gaps = 15/292 (5%) Query: 127 ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 A + +G L+ ++ D N L++ + + ++D+ QV + Sbjct: 447 ARPTPNSISGSSSLNTSINIIPDAIRNALIIEATPADYQVVLDVLKRLDVLPRQVLIEVT 506 Query: 187 IVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDL 246 + + LGV+WT + G + +T + +N G N + Sbjct: 507 LAEVTLNDSSSLGVEWTFIKDGGSVADGLIQ------GTLGSTNVLQYNFG--NTQKWAA 558 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKE 299 L+AL K ++I++SP +LAS + A I +E+P + + G T+++++ Sbjct: 559 TLTALASKGDVNILSSPSVLASDNKEAKIDISTEVPVVTTEYKYGTDGDDMLATNIQYRN 618 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 + + VTP + ++G + ++++ + + E + K+ ++T + V +T+A Sbjct: 619 TGVILTVTPHINERGLVSMEINQEVSEQADAVLAGGQEYPSFYKRSVQTTLTVNDNQTIA 678 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +GG+ +K + +PLL +P+F LF +E+ EL++ ITPR+VS Sbjct: 679 IGGLMRKKEEDSSAGIPLLNQLPFFKYLFGKTAGGNEKNELIILITPRVVSD 730 Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 73/166 (43%), Gaps = 6/166 (3%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQ 72 +KP + L D+ + +V++ +AE K+N +V D+SG V++H L Sbjct: 136 NESKPGGLVLNFDNADLYEVVRTMAEILKINYLVEKDISGAVTIHTAGQLKRDELFYVFY 195 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNI--ARQEAEQARAQANLPLENRSITLQYADAG 130 +++ GL ++G++ + ++ + R + + + + L++ A Sbjct: 196 QILEINGLTAVRDGDLYRIVALNEASRMPIGLRTSTDDGEISHGERVIIQIVPLKFISAV 255 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 E+ K +SA G++ +N +LL D T + + V D+ Sbjct: 256 EMTKIITPFISADGTIVSQADSNMMLLVDKGTNIDKALRLVKVFDV 301 >UniRef50_B7RHZ1 General secretion pathway protein D n=1 Tax=Roseobacter sp. GAI101 RepID=B7RHZ1_9RHOB Length = 644 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 124/298 (41%), Gaps = 16/298 (5%) Query: 126 YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 DA + + S+ TN +++R + L+ + Q + +D+ QV + A Sbjct: 303 NPDAQSFGSGPDAAPISPVSVQASIETNSVIVRGTQRQLAEVSQLIKALDVRRPQVMIEA 362 Query: 186 HIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSV----------ATATTHVGFN 235 IV ++ LGV+ + + G + + S+ A G + Sbjct: 363 AIVEVSGDVAERLGVQLGIGENTETGSIAATSFGNGGGSLQNVLVALGQSNAAALSTGLS 422 Query: 236 IGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV----SSGESG 291 +G + + AL +++++P + Q A+I G +P++ + G + Sbjct: 423 VG-LASDSFGALIQALNTSTSANLLSTPSVTTMDNQSATIVVGQNVPFRTGRLTTDGGNV 481 Query: 292 ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 A +E ++ + M V P + G ++L++ + + L +++ I T V Sbjct: 482 AEVIEREDVGITMVVKPRITAGGVVQLEIEQEVSSLTNQAVTGAAD-LVTNRRVINTTVL 540 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ++G T+ LGG+ T VPLLGD+P G LF+ +R L VF+ P ++ Sbjct: 541 AENGGTVVLGGLITDDRLQNNQKVPLLGDVPVLGNLFKSRNNSRSKRTLFVFLRPTIM 598 Score = 57.5 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 20/177 (11%), Positives = 63/177 (35%), Gaps = 7/177 (3%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-- 60 + + L+ A + + + ++ + + ++E LV+ P+++G V++ Sbjct: 10 ALVFLAVTALVRPHVAQAQETFVINLRGADISLLAEQVSEITGRTLVLDPNLTGDVTVVS 69 Query: 61 --HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 L Q++++ G + G + + + + + ++ + + Sbjct: 70 QQSLDSEGVWALFQSILRVRGFAAVETGAVWQIVP---ELDARTKGSPQKIDTPGSQDVV 126 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 R + L + E + L+ G + + N +++ D + + D Sbjct: 127 TRLLRLNRLPSAEAVRVLRPLIDEAGYIEAIEDPNAIVVTDTLANVDRIVAIATTFD 183 Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 9/135 (6%) Query: 51 SPDVSGTVSLHLTDVPWKQALQTV---VKSAGLITRQEGNILSVHSIAWQNNNIARQEAE 107 S DV + L L +P +A++ + + AG I E V + N+ R A Sbjct: 122 SQDVVTRL-LRLNRLPSAEAVRVLRPLIDEAGYIEAIEDPNAIVVTDTLA--NVDRIVAI 178 Query: 108 QARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG---SMTVDKRTNRLLLRDNKTAL 164 +E I YA+AG +A A ++L G ++VD +N LL+R + + Sbjct: 179 ATTFDGEAEMEAEVIRFTYAEAGTVATAISEVLGPAGTGARLSVDVSSNVLLVRGTQRDI 238 Query: 165 SALEQWVAQMDLPVG 179 S + MD Sbjct: 239 SQIRSLARAMDTSPR 253 >UniRef50_B8GXR3 Type II secretion pathway protein D n=3 Tax=Caulobacteraceae RepID=B8GXR3_CAUCN Length = 687 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 131/318 (41%), Gaps = 36/318 (11%) Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 A + ++ N L++ L + + Q+D+ QV + A +V Sbjct: 315 PSAPVAATPSANGPQATIARFPGANALIINAPPETQRTLAEVIRQLDVRREQVLVEAIVV 374 Query: 189 TINEKSLRELGVKWTLADAQHA------------------GGVGQVTTLGSDL------- 223 + + + ++LGV++ L G TT G+D Sbjct: 375 EVTDGTAKQLGVQFLLGGTNGTIPFVATNYTNATPSLLPLVGAAATTTSGADTEALKSLR 434 Query: 224 -----SVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQG 278 S+ TA+ +GR L ++A+++ +++++P ++ + A I G Sbjct: 435 DAAVSSLLTASGVTSGVVGRSGDALFGAIINAVKKDTGSNLLSTPSIMTLDNEEARILVG 494 Query: 279 SEIPYQVS-----SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQ 333 E+P S + +++ + + +EV P + G I L L + + Sbjct: 495 QEVPITTGEVLGDSNANPFRTIQRQNVGIQLEVKPQINAGGGITLFLRQEVSSVAGPVSV 554 Query: 334 ADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGK 393 E++ I+K+EIET V G+ + LGG+ ++ P LGD+P G LFR + Sbjct: 555 GSSELI-INKREIETTALVDDGDIVVLGGLLDQQETQSAQRTPGLGDVPGLGALFRSTAR 613 Query: 394 EDERRELVVFITPRLVSS 411 E ++ L+VFI PR++ S Sbjct: 614 ERKKTNLMVFIRPRIIRS 631 Score = 74.1 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 87/243 (35%), Gaps = 21/243 (8%) Query: 26 LMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQALQTVVKSAGLI 81 L V D + +Q +A+ ++ P V GTV++ L + +++ + Sbjct: 37 LNVQDADIRVFIQDVAKSTGTTFIIDPRVKGTVTVASNGPLNRRELFEVFLATLRANNFV 96 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 GN + N ARQ + A L+ DA + + L+ Sbjct: 97 ATPAGNGAY---RIEPSENAARQPSAAGGQFA-----TEVFRLRTLDAASAVEMLKPLVG 148 Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE---- 197 +G + + R +++ D + + +AQ+D V VT+ S RE Sbjct: 149 PQGQVVANPRGAVVVVADYADNVRRIRGLLAQVDQDRAMVHT----VTLTHSSAREIAQV 204 Query: 198 LGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQL 257 L A+ G G VT + D S + + R+ + DL+ A E + Sbjct: 205 LNDMLATPGAEGKSGRGAVTVVPVDSSNSVLLRGDSDAVQRLLPVIADLDRRA-ESSDDV 263 Query: 258 DII 260 ++ Sbjct: 264 RVV 266 >UniRef50_A1TYN1 Pilus (MSHA type) biogenesis protein MshL n=2 Tax=Marinobacter RepID=A1TYN1_MARAV Length = 572 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 90/457 (19%), Positives = 180/457 (39%), Gaps = 59/457 (12%) Query: 12 LIPGVQAA--KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ 69 L+P + ++ + ++ + +VP + +AL + N+VV PDV+ TVSL L+DV + Sbjct: 82 LLPPLSSSPQQDERFDVNASEVPASSFFEALVAGTRYNVVVRPDVATTVSLRLSDVTVPE 141 Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARA------------------ 111 + GL + G + V + Q R Sbjct: 142 VMDIAADLYGLDITRSGRLYRVAADQVQTRLFPIDYLHFKRRGGSETRVSSGQVSSSRSN 201 Query: 112 -------QANLPLENRSITLQYADAG-------ELAKAGEKLLSA-KGSMTVDKRTNRLL 156 N E R++ ++ A ++ G + V+ ++ Sbjct: 202 REGAGSNDNNEDNETRNLVGTTISTQTESDFWRDIRDALNMIVGGDNGQVVVNPGAGLVM 261 Query: 157 LRDNKTALSALEQWVAQMD-LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQ 215 +R L +E ++ + + + QV L A I+ + + G+ W D Q + G Sbjct: 262 VRAGADDLRLVENYLRKTELIMQRQVVLEAKILEVGLNEGYQQGIDWN--DVQSSAGRAD 319 Query: 216 VTTLGSDLSVATATTHVGFNI-GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 T S T +G ++ + L Q+ + I++SPR+ + Q A Sbjct: 320 YFTSQSLGGQQIRTPDIGGLFSATVSAGDFTGLIELLGQQGNVQILSSPRISTVNNQKAV 379 Query: 275 IKQGSEIPYQV-----------SSGESGATSVEFKEA--VLGMEVTPTVLQKGRIRLKLH 321 IK G++ + ++ +S +TSVE + ++VTP + + G I L +H Sbjct: 380 IKVGTDEFFVTDIDFDDNNSAVTATDSTSTSVELTPFFSGISLDVTPQIAEDGAITLHVH 439 Query: 322 ISQNVPGQ-----VLQQADGEVL--AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDS 374 S + + + D + +E ++ + +SG+ + +GG+ ++ + Sbjct: 440 PSVSEVADQEKVITIGERDVTLPLARSTVRETDSVIRAESGQIVVIGGLIQNSSEDNNSA 499 Query: 375 VPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VP +IP G+LF+ E + ELV+ + P + ++ Sbjct: 500 VPFFSEIPLLGELFKQRNFESRKSELVILLRPVVANA 536 >UniRef50_Q82WH1 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Nitrosomonas europaea RepID=Q82WH1_NITEU Length = 697 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 126/276 (45%), Gaps = 14/276 (5%) Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 G + + N L+ + +++ + Q+D+ QV + A + + + GV+W Sbjct: 396 GRLVAIEENNSLMFYGTEDEFRVIQEALKQIDVLPRQVMIEAFLAEVTLNNNLRYGVQWF 455 Query: 204 LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASP 263 ++ TL + + A+ GF+ + L+AL+ K ++ I+++P Sbjct: 456 FDSGENT------VTLSATDVGSVASQFPGFSYIYAGKANARIVLNALQSKTEVKILSAP 509 Query: 264 RLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKEAVLGMEVTPTVLQKGRI 316 ++ + Q AS++ G ++P + + +++ ++ + +EV P V G + Sbjct: 510 KISVLNNQKASLQVGDQVPIVTQTSQGTVVSGAPVINTIQMRDTGVILEVIPRVNDNGNV 569 Query: 317 RLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP 376 L + + Q + + I +++I + + + G T+ALGG+ +G VP Sbjct: 570 ILDVTQEVSEVAQT-TSSGIDSPTIQRRKIHSVIATRDGFTVALGGLIRENGSAGNSGVP 628 Query: 377 LLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 L+ D+P G LF+ + + R ELVV + P ++ ++ Sbjct: 629 LIKDVPVIGNLFKSNTSDIRRTELVVLLVPHVMRNQ 664 Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 70/194 (36%), Gaps = 16/194 (8%) Query: 21 PQKVTLMVDDVPVAQVLQA-LAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTVV 75 ++ L ++ + V+ L E KL+ VVSP V G ++L ++ AL+ + Sbjct: 87 GERFELNFNEADIRGVIDVVLGEMLKLDYVVSPAVQGRITLRTSRPVSKASLLSALEAAL 146 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 + + ++ +SV + + + + I L+Y +A ++ Sbjct: 147 GTVSAVILKDEQTISVLPWSEAPQRVRPAQRFASAMPPTPGYAVEIIPLRYINANDMQAI 206 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL-----------PVGQVELS 184 + + + D R L++ + A+ + D+ + Q L Sbjct: 207 LDSFVPKGIVLQADTRHGHLVVAGSSQDRGAILHTIENFDVDWLNGMTFALYKLSQSRLE 266 Query: 185 AHIVTINEKSLREL 198 A + + E E+ Sbjct: 267 AIVTELREIFQGEI 280 >UniRef50_A1WFQ3 General secretion pathway protein D n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WFQ3_VEREI Length = 720 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 67/277 (24%), Positives = 131/277 (47%), Gaps = 11/277 (3%) Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL 204 + D+ N +L+ + + +E + ++DLP QV + A I+ + G++W Sbjct: 414 RVMADELNNSVLVWSTRAEYAKIESTLRRLDLPPTQVLIEASIIEVTLNDDLRYGLQWAF 473 Query: 205 ADAQHAGGVGQ---VTTLGSDLSVATATTHVGFNIG-RINGRLLDLELSALEQKQQLDII 260 D++ GQ + G+ GF+ + + L+ L K + ++ Sbjct: 474 NDSRSGIDRGQGALSSRDGTSTGGILGGALAGFSYALKSPAGAVRAMLNVLSAKTTVKVV 533 Query: 261 ASPRLLASHLQPASIKQGSEIPYQVSSGES-----GATSVEFKEAVLGMEVTPTVLQKGR 315 ASP L+ ASI G + P Q + + +T++E+K+ + + VTP+V Sbjct: 534 ASPSLMVLDNHTASIAVGDQTPIQAGTTSNLEGTVTSTNIEYKDTGVNLVVTPSVNAGNI 593 Query: 316 IRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSV 375 + +++ S G + + A ++++ ++V V+SGE++ +GG+ + S + + Sbjct: 594 VTMQIDQSVTDVGAKDEVTNQR--AFLQRQLSSKVSVRSGESIVMGGLIQESSSSTKSGI 651 Query: 376 PLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 P+L +P FG LF + R EL+V ITPR+V S+ Sbjct: 652 PVLHALPLFGNLFGTTVNDGRRTELLVIITPRVVRSD 688 Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 7/166 (4%) Query: 18 AAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQA---LQ 72 + + ++ P+A+V++ L + K++ V+ P +SG+++L V QA L+ Sbjct: 22 PPEGAPSSFRFEEAPIAEVVRTMLGDILKVDYVLHPPISGSITLATQQPVAPDQAIFLLE 81 Query: 73 TVVKSAGLITRQE--GNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 T +++ GL ++ G + A ++A + LQY A Sbjct: 82 TALQANGLAMLRDPRGAYHVGRPETLKGIGAAVRQAGVGSGPLPPGSGAVVVPLQYIGAA 141 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 E+A ++ + + VD N L+L ++ ++ D+ Sbjct: 142 EMATILRPMVPPEALIRVDTVRNLLVLAGSRAQAEGWLDIISTFDV 187 >UniRef50_B0VJ43 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ43_9BACT Length = 472 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 99/424 (23%), Positives = 183/424 (43%), Gaps = 54/424 (12%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT-------VSLHLTDVPWKQALQTVV 75 KVT DD ++ V +AL+ N+V++ D +GT V++++ DVP + A+ V Sbjct: 44 KVTFNADDATLSSVFKALSRLSNTNIVLAIDQAGTAEKEEKRVTININDVPIETAVSLVA 103 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 SAGL R G+ + Q NI + E + I L DA +++ A Sbjct: 104 SSAGLSYRVIGSNTF---LVGQKQNIMEEIGE----------RSDIIFLNNLDAKKVSDA 150 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 + G +T + N L++ N +E+ V +D Q+E+ ++ ++ Sbjct: 151 LQN---TSGKITPLEGQNALMVYGNPETFKEIEKLVKSIDTQQQQIEIRVRLIEVHLNEA 207 Query: 196 RELGVKWT------------------------LADAQHAGGVGQVTTLGSDLSVATATTH 231 +++GV W+ +DA G T G Sbjct: 208 KQIGVDWSKLNHLTTILAEDPVNQYGTGLPYNYSDATGYLPHGDPTDFGVIPDEQYFQRI 267 Query: 232 VGF-NIGRINGRL--LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 GF +IG + +L D+ + L + ++ R+ A + + A++ G +P+ V+ Sbjct: 268 NGFHDIGHFSRQLTAFDVTIDWLLENNAAQLLTDTRVTALNGELATMHIGEVVPFVVTDK 327 Query: 289 ESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 E+ VE E + + VTP V + G I + ++ + V + G + + + + Sbjct: 328 EN-QLQVERSETGIILNVTPKVNKDGNITMNINPEVSS---VTELVGGYIPRTKVRRVSS 383 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 V V + + +GG+ + +PLLGD+P G++F+H + E +L++ ITPRL Sbjct: 384 AVTVPNEHKIIVGGLLNSNITQKINKIPLLGDLPLIGKIFQHRYELVENTDLIIEITPRL 443 Query: 409 VSSE 412 VS + Sbjct: 444 VSMQ 447 >UniRef50_Q04SX5 Type II secretory pathway component, protein D n=7 Tax=Leptospira RepID=Q04SX5_LEPBJ Length = 598 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 157/377 (41%), Gaps = 39/377 (10%) Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 +V G+ ++ + N + + E + + TL++++A + Sbjct: 184 DVIVYRNTNTIVLSGSGADINKLLVLINELDLKLEEASPGAIASAGDVHIYTLEHSEAEK 243 Query: 132 LAKAGEKL---------LSAKGSM-------------TVDKRTNRLLLRDNKTALSALEQ 169 +A KL LS + + K +N +++ + + + Sbjct: 244 IAATLVKLDNPVVQSEELSPEKKVPGQIPMKVEKIKAVGHKESNSVIVTATNAEWAEIRK 303 Query: 170 WVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVA--- 226 + +D QV L IV + L + G+ W ++ + ++ Sbjct: 304 IIKVLDSARKQVLLEVLIVELTSSDLNDFGIDWRYKGEAFGQFNSGLSKEANIINSNGQI 363 Query: 227 --TATTHVGFNIGRI--NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 T GF++G + + LSA + + +++++P++L Q A I G ++P Sbjct: 364 NPNVNTLSGFSLGFLKAGSEQIIGILSANQGNENFNVLSAPQVLTVDNQEAEISVGQDVP 423 Query: 283 YQV-----SSGESGATSV---EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 + +G + A +V E++ + ++ TP V + RI L+L Q + Sbjct: 424 VRTQSRNAGTGGTNAVTVDNYEYRPTGIKLKFTPHVNKNNRITLELF--QEIKNIAEIAL 481 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 G +++EI+T + +++ +++ +GG+ + + +P LGDIP+ G LF+ ++ Sbjct: 482 AGGNPTFNRREIKTSISIENTQSIVIGGLISNDKQKRIIKIPFLGDIPYLGHLFKRTTEK 541 Query: 395 DERRELVVFITPRLVSS 411 ++ L+VFITP ++ S Sbjct: 542 IKKTNLMVFITPHILDS 558 Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 66/159 (41%), Gaps = 9/159 (5%) Query: 27 MVDDVPVAQVLQALAEQEKLNLVVSPDVSGT-VSL-HLTDVPWKQAL---QTVVKSAGLI 81 D + L+ ++ K N+++ + G +++ ++P K A ++V++S G Sbjct: 57 NWRDTELNDFLKGMSAILKKNILLDESLKGKKITIISQKEIPIKNAFIFMKSVLESLGFG 116 Query: 82 TRQEGNILSVHSIAWQNNNI----ARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 +E +++S+ I +E + + I ++ EL + Sbjct: 117 VVEEPDLISIVKIKDALARSPVVRVGKELIPETEVGDYRTITQIIPIENTKPEELEPILK 176 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 +L S + V + TN ++L + ++ L + ++DL Sbjct: 177 RLTSPNTDVIVYRNTNTIVLSGSGADINKLLVLINELDL 215 >UniRef50_B0UFJ1 General secretion pathway protein D n=4 Tax=Methylobacterium RepID=B0UFJ1_METS4 Length = 797 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 18/281 (6%) Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 + D+ N L++ +T + + + ++D QV L I + E GV+W L Sbjct: 472 IVADETNNSLVISATRTQYEKILRILGRLDARPTQVLLETVIAEVTLNDKLEFGVQWFLK 531 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHV---------GFNIGRINGRLLDLELSALEQKQQ 256 + + Q T S S + + GFN +N + L+AL + Sbjct: 532 NGGSRFNLAQSDTAASVASGTSGAGALVSAAMRGVPGFNY-LLNDADFHVVLNALRGVTR 590 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKEAVLGMEVTPT 309 +++++SP + + A ++ G ++P SG+S +E K+ + + VTP Sbjct: 591 VNVLSSPNITVLDNRTARLQIGDQVPIVKQSGQSALAGNAPILNQIELKDTGVILSVTPR 650 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 V + G + L ++ + ++ I ++ + T V V G +LA+GG+ K + Sbjct: 651 VNKNGLVVLDINQEVSDVVPTTT-SNINSPTIRQRRVATSVAVSDGHSLAIGGMVQEKAQ 709 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 G +++P+LGD+P G FR+ R EL+VF+ P+++ Sbjct: 710 IGTEALPVLGDLPVIGPAFRNKSDLRVRTELIVFLRPKVIR 750 Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 52/131 (39%), Gaps = 8/131 (6%) Query: 50 VSPDVSGTVSLH----LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQE 105 + V+GTV+L ++ ++ + + G+ R+ G+ + + + Sbjct: 100 LDERVAGTVTLQTAGPVSRAALLGLFESALAARGVTLRRRGSHVQILPAGAPPPPSGVRG 159 Query: 106 AEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALS 165 A + + I L++ AGE+ + + D+ N L++ ++ + Sbjct: 160 TPDAAGEPGA----QVIPLRWISAGEMQSILAAVAPRDLVLRADRTRNLLIVSGDRAQIQ 215 Query: 166 ALEQWVAQMDL 176 AL + +A D+ Sbjct: 216 ALRETIAVFDV 226 >UniRef50_C1SHL2 General secretion pathway protein D n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHL2_9BACT Length = 616 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 139/330 (42%), Gaps = 39/330 (11%) Query: 120 RSITLQYADAGELAKAGEKLLS------------AKGSMTVDKRTNRLLLRDNKTALSAL 167 + L A+A ++ K KL + ++ D TN +++ + S + Sbjct: 259 KVFYLNNANAEDVEKVLSKLTGVENEDKGKKASNSTSTVAFDAATNSIIVFGSPDLYSKV 318 Query: 168 EQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHA--------GGVGQVTTL 219 E + ++D P QV + A I+ + ++ + GV+W + + G G +T+ Sbjct: 319 EGLIEKLDRPREQVYVEALIIETSIENGSDFGVEWQVGAGNDSQAGTIGYLGSDGALTSF 378 Query: 220 GSDL----SVATATTHVGFNIGRING---------RLLDLELSALEQKQQLDIIASPRLL 266 S + S GFN+G + L + + ++ ++I+++P++L Sbjct: 379 QSSVLDGDSPNFGALSSGFNLGILGDIVTYEGVSFPTLGILANFVKTASGINILSNPQIL 438 Query: 267 ASHLQPASIKQGSEIPYQVS----SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHI 322 + A I G P+ S S + S ++++ + + + P + I LK I Sbjct: 439 TLDNEEAEIFVGENRPFLTSTKYDSNNNPVQSYDYRDVGVKLNIVPQISSNDTITLK--I 496 Query: 323 SQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIP 382 Q V AD + +T+V++K G + + G+ +++ SVP L IP Sbjct: 497 EQEVKKVSGATADVVAPVTLTRSTKTKVKLKDGAIMVISGLLKDDSETYNSSVPWLSSIP 556 Query: 383 WFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G LF++ E+ ++VFI+ ++ ++ Sbjct: 557 VIGWLFKNKNSSSEKTNMMVFISTSIIRTQ 586 Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 10/172 (5%) Query: 8 LLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVS-PDVSGTVSLHLTDV- 65 LL L+ ++ + D+ + + + ++E N V D+ G VS+ + Sbjct: 8 FLLYLLAFSSFVYAAEINVNFRDMEMQEFVSFVSEFTGRNFVYDKKDLKGQVSIESSSEM 67 Query: 66 ---PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSI 122 + + +++ GL G + + + ++ A L + Sbjct: 68 GTDDIMEIFASTLRANGLELVDRGTYVEIVRQSDISDIADSDGVGDGNA-----LITTIL 122 Query: 123 TLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 T DA LA KL S G + V K N +++RD ++ L++ + ++ Sbjct: 123 TSHNYDASLLAGTLIKLKSKAGYVDVLKGLNAIVIRDRIDRITKLKKLMEKL 174 >UniRef50_Q2SVR9 Type II/III secretion system protein n=36 Tax=Burkholderia RepID=Q2SVR9_BURTA Length = 492 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 97/376 (25%), Positives = 165/376 (43%), Gaps = 37/376 (9%) Query: 48 LVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAE 107 V PDV+ VP QA+ + K AG ++ ++ + I R E Sbjct: 90 FVADPDVAD------VHVPTPQAVFVLGKKAG--------TTTLFALGANDRTILR---E 132 Query: 108 QARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRL-----LLRDNKT 162 + P R + ++ + L A GS+ V R +++ K Sbjct: 133 TVVVNVDTPSLQRILDARF------PQLHLTLAGAPGSLMVSGRVPSAADADAVVQTLKP 186 Query: 163 ALSALEQWVAQMDLPVG-QVELSAHIVTINEKSLRELGVKWTL--ADAQHAGGVGQVTTL 219 L E V ++ L QV L I ++ ++LG+ W+ A GG+ TL Sbjct: 187 YLRQQESLVNRLTLARPIQVHLRVRITEVDRNITQQLGINWSALGASGNFVGGLFNGRTL 246 Query: 220 GSDLSVATATTHVG-FNI---GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 S A + G F++ + +D L AL+Q+ + ++A P L A Q AS Sbjct: 247 FDTASKAFDLSPSGAFSVVGGFHTSHYSIDGVLDALDQEGLITMLAEPNLTAISGQTASF 306 Query: 276 KQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKL--HISQNVPGQVLQQ 333 G E P V+ +GA +++FK + ++ TPTVL RI LK+ +S+ P + Sbjct: 307 LAGGEFPIPVAQDTTGAITIQFKPYGVSLDFTPTVLADNRISLKVRPEVSEIDPTNSVTT 366 Query: 334 ADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGK 393 +V A+ + ++T VE+ SG++ A+GG+ K+ +P L +P G+LF Sbjct: 367 GSIKVPALTVRRVDTTVELSSGQSFAIGGLLQSKSSDVLAELPGLARLPVLGKLFSSRNY 426 Query: 394 EDERRELVVFITPRLV 409 +++ E+VV +TP +V Sbjct: 427 LNDKTEVVVIVTPYIV 442 >UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1Q9C2_PSYCK Length = 750 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 123/295 (41%), Gaps = 29/295 (9%) Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL 204 S+ D+ N +++ + +E V Q+D QV + A IV ++ +LGV+W L Sbjct: 370 SIIADETQNAVIVNAAPELMFEIEDAVNQLDSRRSQVLIQAAIVEVSGDDATQLGVQWAL 429 Query: 205 ADAQHAGGVGQVTTLGSDLSVATATTHVGFNI---------------------GRINGRL 243 +A GV +G+ A G + N + Sbjct: 430 GNANSGYGVVNFNNVGASAVSLAAAALSGGTGISAAAGSIAGALLGIGSSSKDSKGNAQF 489 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVE 296 L AL+ ++++ P +L + ASI G +P+ S +G+ +++ Sbjct: 490 YGAILQALDSSTSANLLSMPSILTLDNEKASILVGQNVPFVTGSYTTGSDSSTNPFQTID 549 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 ++ + + V P + G +RL++ + + L +K I T + + Sbjct: 550 RQDIGINLNVIPHIGANGTVRLEVSQEVSSV-VPGSAGNASGLITNKSLINTTILADDQQ 608 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 T+ALGG+ + + Q VP LG++P G+LFR D ++ L++F+ P ++ Sbjct: 609 TIALGGLMRDNSTTRQQKVPGLGNVPLIGRLFRSDNDNSQKSNLIIFLQPTILRD 663 Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 61/180 (33%), Gaps = 12/180 (6%) Query: 5 IAALLLMLIPGVQAA----KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 + L + IP A+ + + + D + + +A N V+ P ++G V++ Sbjct: 22 LCRPLCLAIPLWAASTGLVSAESWKVNLQDADIKAFINEVATITNQNFVLDPRINGNVTV 81 Query: 61 HLTDVPWK-----QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL 115 +++ P Q +V++ G+ G + + + Sbjct: 82 -ISNKPLSRDEIYQLFLSVMQVNGIAAIDSGTTIKLVPDNVAKQTGVAVDLRGESVGET- 139 Query: 116 PLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 L R I L A E+ L+ N L+L D +L+ L + +D Sbjct: 140 -LATRVIYLTNTQAAEVLGVIRPLMPPSAHAAAVPGVNALVLSDRADSLNQLTALIRDLD 198 >UniRef50_B6QWW0 General (Type II) secretion pathway (GSP) D protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QWW0_9RHOB Length = 749 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 97/412 (23%), Positives = 177/412 (42%), Gaps = 33/412 (8%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 Q + + V + Q ++ + ++ NL+ +P V + L +P + + + Sbjct: 334 QQSLLVAVQSREMLQRVRRITKEVDYNLLDTPKVR---IITLKYLPANEIATQLTQIL-- 388 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQ------ANLPLENRSITLQYADAGEL-- 132 EG Q +R AR ++ SI+ ++++A +L Sbjct: 389 --EGEGGSGVAAPPVEQRQQASRGNGSSARKFPVSANGESVGPAEDSISNRFSNANKLFD 446 Query: 133 ----AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 A + + +K + D R N LL+ + V +DLP+ QV + A I Sbjct: 447 GLTDAPSNRVAVGSKVGIVADSRNNALLVNSTYKEFKHIRDVVQALDLPLSQVVIEATIA 506 Query: 189 TINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL 248 +N GV+W LA AGG+G V A+ T +N +D+ L Sbjct: 507 EVNINDNLSYGVQWYLAKGNFAGGIGAVA------DGASRPTKAAGGALSLNTVGVDVVL 560 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGAT---SVEFKEAV 301 AL+ ++ +I+SP L + A + G ++P+ Q SS + T V+ K+ Sbjct: 561 KALQNITKVKVISSPYLTVLDGRKARLVIGDQVPFASRSQSSSNDGNVTVTNEVDVKDTG 620 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 + ++V P + + L++ + Q + I + I + + V+SG T+ LG Sbjct: 621 IVLQVEPNIRSNNSVLLQIQQEVSNVVQNKTEEGSLTPTIATRTINSDIVVESGRTILLG 680 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFR-HDGKEDERRELVVFITPRLVSSE 412 G+ + ++G+ VP+L IP FG+LF+ + + R EL+V ITPR+V + Sbjct: 681 GLIQERKENGESGVPILRKIPVFGELFKENTTNDTRRTELLVMITPRVVRKQ 732 Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 4/153 (2%) Query: 24 VTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQTVVKSAGLI 81 V L + +Q L ++N V+ + GTV+ + + Q L V G Sbjct: 133 VRLNFRGESLEYFIQQTLGGILQVNYVIDEPLEGTVTFQTENPIAKDQMLSLVRVLLGRN 192 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 I + I A ++ + +L L R + ++ A + + AK + +L Sbjct: 193 GYILKLIDQIFHIGRPETIQAIEQFSGVGSAGDLKL--RILPVRSASSDDAAKVLQAILP 250 Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 A S + +N++ +R + A E+ V + Sbjct: 251 AGASAVAVEGSNKIAIRARPEDIGAAEELVNSL 283 >UniRef50_A1JPH4 General secretion pathway protein D n=28 Tax=Yersinia RepID=A1JPH4_YERE8 Length = 648 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 69/330 (20%), Positives = 133/330 (40%), Gaps = 24/330 (7%) Query: 104 QEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA----------------KGSMT 147 Q ++ Q + + + ++YA A +L + S+ Sbjct: 260 QMIKRLDHQQDSYGSTKVVYMKYAQASKLLDVLNGVSQGSQSDKTKKNSGKSHIKNVSIK 319 Query: 148 VDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT--LA 205 +TN L++ + + L+Q + ++D+ QV + A IV LG++W L Sbjct: 320 AYDQTNALVITADPKVMKELDQVIERLDVRRAQVLVEAIIVETQNGEGLNLGIQWANKLY 379 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRL 265 + ++ G G G D +AL +I+A+P + Sbjct: 380 GGANFLQKPNSIQTNNNSGNPIPMMIAGLTAGFYKGNW-DGLFTALATNSNNNILATPSI 438 Query: 266 LASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLH 321 + A G E+P Q ++ + S+ + + ++V P + + + L++ Sbjct: 439 VTLDNMEAEFNVGQEVPVLTSTQTTATDKVYNSISRQSVGVMLKVKPQINKGDSVLLEIR 498 Query: 322 ISQNVPGQVLQ-QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGD 380 + A+ +K+ + V VKSGET+ +GG+ +K + VPLLGD Sbjct: 499 QEVSSVADSSDVNANNLGSVFNKRVVNNAVLVKSGETVVVGGLLDKKINKIINKVPLLGD 558 Query: 381 IPWFGQLFRHDGKEDERRELVVFITPRLVS 410 IP+ G LFR ++ E+ L++FI P ++ Sbjct: 559 IPFIGGLFRQSKEKIEKSNLILFIRPTILR 588 Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 8/182 (4%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH- 61 ++ +++ + + D + + + +++ +++ P V G VS+ Sbjct: 14 WFLFKFVILAAIFPIVGYAENFSASFRDADIKEFINTVSKNINKTIIIDPKVQGLVSVRS 73 Query: 62 ---LTDVPWKQALQTVVKSAGLITRQE-GNILSVHSIAWQNNNIARQEAEQARAQANLPL 117 L + + Q V+ G + NIL V ++ + A Q + L Sbjct: 74 YELLDEEKYYQFFLNVLDVYGYTVVEMPNNILKVIPAKRAKGSVVPLQNNAAPPQGD-EL 132 Query: 118 ENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 NR L++ A LA +L S GS+ +N +L+ ++ L ++ +D Sbjct: 133 INRVFKLKHLLAKNLAPLLRQLNDNSESGSIVNYDPSNVILITGRAAVVNRLYAIISTLD 192 Query: 176 LP 177 P Sbjct: 193 QP 194 >UniRef50_Q3A894 Putative type II secretion system protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A894_PELCD Length = 779 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 66/397 (16%), Positives = 158/397 (39%), Gaps = 17/397 (4%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS-GTVSLHLTDVPWKQALQTVVKSA 78 + V+L + +V + ++ +N V+ D+ + L L D Q L+ ++ Sbjct: 180 SSKPVSLEFKQTDIREVFEIFSQLAGINFVLDEDIPMEMIDLELKDSSLLQGLELLLNIY 239 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 L + + ++ I ++ R + ++ L + A Sbjct: 240 KLHAK---------PLNDKSVLIYPNSTDKTRQYDDYKIKT--YYLSHISAKHAVNLLRT 288 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 +L ++ V + N L+ R+ + EQ + D +V ++ ++ + Sbjct: 289 MLKIN-NLFVHEERNALVFRERPEVIQLAEQILDANDRADSEVLFELELIEVSHSDNWKF 347 Query: 199 GVKWTLADAQ-HAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQL 257 G G + G AT F+ L + + Sbjct: 348 GPSLNPNSVSLGLAKGGNIVASGLSAGDATTNLVQSFSSLESVYTLPTVVFDLQKTLVDS 407 Query: 258 DIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT--SVEFKEAVLGMEVTPTVLQKGR 315 +I+A+PR+ + + A++ G+ P + + ++++ + + +++ P + Sbjct: 408 EILATPRIRVKNREKANVHVGNREPVITVTTTGETSTDNIQYVDVGVKLDIEPKIQLDDT 467 Query: 316 IRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDS 374 + L + + + A+G + L+I + +T + +K+GE +GG+ + + Sbjct: 468 VVTNLSLEVSGVTEKNTTANGSLALSISTTKAQTTLTLKNGERTVIGGLIRDDSTKTRKI 527 Query: 375 VPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +PLLGD+P G+LF + K+ ++RE+++ ITP ++ + Sbjct: 528 IPLLGDLPLIGRLFTNHNKDKKKREILLSITPHILQN 564 >UniRef50_B9XM19 Type II and III secretion system protein n=1 Tax=bacterium Ellin514 RepID=B9XM19_9BACT Length = 785 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 129/297 (43%), Gaps = 16/297 (5%) Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 + +GE + + D+RTN LL+ +K + ++ V ++D+ + QV + A I+ Sbjct: 442 VKRASSSGEFQILGNNKIIADERTNSLLVFASKQDMDVIKDIVGKLDVVLAQVLIEAIIM 501 Query: 189 TINEKSLRELGVKWTLADAQHA-----------GGVGQVTTLGSDLSVATATTHVGFNIG 237 + R+LGV + G + S + A + GF+ Sbjct: 502 EVTLDDTRDLGVSYLQTSPSGNNYFQGIGAIKNGPFASFSNFASTATNAANSLPSGFSYL 561 Query: 238 RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS---GESGATS 294 ++A ++++++ PR+ SH A+++ G +PY + G +G S Sbjct: 562 AQFNNDFSATITAAATDNRINVLSRPRIQTSHAVTANLQIGDTVPYVTGTYFGGLNGQAS 621 Query: 295 VEFKE--AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 ++++ + ++VTP + G + + + G + V K+ + +V V Sbjct: 622 SQYQQTFVGINLQVTPLINPDGLVVMDITQDVQQLGTPTIIDNNPVPTTTKRTAQAKVSV 681 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 K +T+ LGG + + VPLL +IP G LFR ++R EL+V I P ++ Sbjct: 682 KDRDTIILGGFISSTKSRSKSGVPLLMNIPVLGYLFRSTSDSNKRTELIVLIRPTVL 738 >UniRef50_D2MI45 Type II secretory pathway, component PulD n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI45_9BACT Length = 406 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 77/405 (19%), Positives = 173/405 (42%), Gaps = 26/405 (6%) Query: 31 VPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILS 90 +P+ L+ + LN+VV P + G V++ + ++A+ ++ G +G ++ Sbjct: 1 MPLLDALRLFSRANALNIVVEPGIEGVVTVDFQGLALEKAMAALLDMQGYYWENDGELIV 60 Query: 91 VHSIAWQ---NNNIARQEAEQARAQANLPLENR--------SITLQYADA----GELAKA 135 V + + + I + + + R +A + + + L D E+ Sbjct: 61 VRRLKTRIFTLDYIRLERSGEGRNKAQVTSGSGRSGGQDAGEVILSQQDDIKFWEEIEAQ 120 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM-DLPVGQVELSAHIVTINEKS 194 LLS +G V++ + + + D + + ++ + + QVE+ A I I + Sbjct: 121 IGALLSPEGRFVVNRLSGTIQVTDLHRRVEEVATFLVNVRNSLYRQVEIQARIYEIALRD 180 Query: 195 LRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQK 254 LGV W+ + G ++ + + N + + AL+++ Sbjct: 181 EYSLGVDWSRIALRTPKGSFKLANI-ITAPAGGFLSRAATAAFSFNDGDFEGVIQALQEQ 239 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPY---QVSSGESGATSVEFKEA-----VLGMEV 306 + +++ PR+L + QPA IK G++ + + G +GA ++ ++ L + V Sbjct: 240 GDVQVVSQPRILTLNNQPALIKVGTDQSFFTSTTTQGTAGAGNIVTEQVRTVTSGLVLSV 299 Query: 307 TPTVLQKGRIRLKLH-ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 TP + + G I + + I + V + ++ ++ V ++ G+ + +GG+ Sbjct: 300 TPQISRDGWIMMDVSPIITRLTDTVESRNGSTAPVLEVKQSGGLVRIRDGQLVMIGGLIQ 359 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + + + +VP LGD+P G F + + ELV+F+ PR++ Sbjct: 360 EQLTNTERAVPFLGDLPVLGSFFSGTYQAERNTELVIFLMPRILR 404 >UniRef50_A8A4B9 General secretion pathway protein D n=30 Tax=Escherichia RepID=A8A4B9_ECOHS Length = 686 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 150/377 (39%), Gaps = 61/377 (16%) Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA-------- 142 + S + R+ + ++ ++ L+Y+ A +L +++ Sbjct: 256 IVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEEA 315 Query: 143 ---------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 S+ K +N L++ + + +L+ + Q+D+ QV + A IV + E Sbjct: 316 EGTVGSGREIVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAEG 375 Query: 194 SLRELGVKWTLADAQ----HAGGVGQVTTLGSDLSVATA--------------------- 228 S GV+W DA G + TLG+ +S A Sbjct: 376 SNINFGVQWASKDAGLMQFANGTQIPIGTLGAAISQAKPQKGSTVISENGATTINPDTNG 435 Query: 229 ---------TTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 + G +G + G + L + A++ +++++P + Q A G Sbjct: 436 DLSTLAQLLSGFSGTAVGVVKGDWMAL-VQAVKNDSSSNVLSTPSITTLDNQEAFFMVGQ 494 Query: 280 EIPYQV-----SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 ++P S+ + +VE K+ + ++VTP + + +++ + + ++ Sbjct: 495 DVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSK----VEGQ 550 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 + +++++T V GE + LGG+ + VPLLGDIP G LF+ + Sbjct: 551 TSLDVVFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADK 610 Query: 395 DERRELVVFITPRLVSS 411 E+R L+VFI P ++ Sbjct: 611 KEKRNLMVFIRPTILRD 627 Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 62/164 (37%), Gaps = 7/164 (4%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTV 74 A+ T D + ++ + +++ P V G VS+ L + + Q + Sbjct: 40 AEEATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNL 99 Query: 75 VKSAGLITR-QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 +++ G E ++L V + E + A + + + ++ ELA Sbjct: 100 LEAQGYAVVPMENDVLKVVKSSAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELA 159 Query: 134 KAGEKLLSAKGS--MTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 +++ + GS + +N ++L + + L + + +D Sbjct: 160 PILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQSVD 203 Score = 51.4 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 12/128 (9%) Query: 60 LHLTDVPWKQ---ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + + +V ++ L+ ++ SAG + +V + + + + R Sbjct: 148 VPVRNVSVRELAPILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQSVDHAGN 207 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKG---------SMTVDKRTNRLLLRDNKTALSAL 167 I L A A E+A+ E L G + D+RTN +++ + + Sbjct: 208 RTEEVIPLDNASASEIARVLESLTKNSGENQPATLKSQIVADERTNSVIVSGDPATRDKM 267 Query: 168 EQWVAQMD 175 + + ++D Sbjct: 268 RRLIRRLD 275 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P34749 Protein transport protein hofQ n=114 Tax=Enterob... 436 e-120 UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas... 403 e-111 UniRef50_B1J2J3 Type IV pilus secretin PilQ n=5 Tax=Pseudomonas ... 394 e-108 UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax... 389 e-107 UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteo... 388 e-106 UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobaci... 387 e-106 UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella ko... 387 e-106 UniRef50_Q39X07 Type II and III secretion system protein:NolW-li... 387 e-106 UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative ... 386 e-106 UniRef50_C8QE32 Type IV pilus secretin PilQ n=1 Tax=Pantoea sp. ... 384 e-105 UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteob... 382 e-104 UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter Re... 381 e-104 UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter Re... 380 e-104 UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella ... 377 e-103 UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadace... 377 e-103 UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=... 377 e-103 UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Ta... 376 e-102 UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legi... 374 e-102 UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vi... 373 e-102 UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=ce... 371 e-101 UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxoba... 371 e-101 UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Pr... 371 e-101 UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammapro... 370 e-101 UniRef50_B8GPV1 Type IV pilus secretin PilQ n=5 Tax=Chromatiales... 370 e-101 UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD 370 e-101 UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Bu... 370 e-101 UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisser... 368 e-100 UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gamm... 367 e-100 UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas in... 367 e-100 UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis... 367 e-100 UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnic... 367 e-100 UniRef50_Q0VMB7 Fimbrial assembly protein pilQ n=3 Tax=Gammaprot... 366 e-100 UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 366 e-100 UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans... 366 e-100 UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobac... 366 e-100 UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein ... 366 1e-99 UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromati... 364 3e-99 UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular or... 364 4e-99 UniRef50_D0LHN1 Type IV pilus secretin PilQ n=1 Tax=Haliangium o... 364 4e-99 UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderi... 364 5e-99 UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fast... 363 7e-99 UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lo... 362 1e-98 UniRef50_Q0AF45 Type IV pilus secretin PilQ n=3 Tax=Nitrosomonas... 362 1e-98 UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 362 2e-98 UniRef50_A6GPK2 Pili assembly protein PilQ n=1 Tax=Limnobacter s... 360 4e-98 UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS 360 4e-98 UniRef50_Q1K2X4 Type II and III secretion system protein n=1 Tax... 359 1e-97 UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax... 359 1e-97 UniRef50_A7BUG3 Bacterial type II and III secretion system prote... 358 2e-97 UniRef50_Q60BY4 Fimbrial assembly protein PilQ n=1 Tax=Methyloco... 357 3e-97 UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 T... 357 3e-97 UniRef50_Q5P5P1 Fimbrial type-IV assembly protein PilQ n=4 Tax=B... 357 5e-97 UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=A... 355 2e-96 UniRef50_Q6MPI6 Fimbrial assembly protein n=1 Tax=Bdellovibrio b... 354 3e-96 UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter... 354 3e-96 UniRef50_Q21H82 Type II and III secretion system protein n=11 Ta... 352 1e-95 UniRef50_A8ZSX5 Type IV pilus secretin PilQ n=1 Tax=Desulfococcu... 351 3e-95 UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadac... 351 3e-95 UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragme... 350 5e-95 UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Bur... 350 5e-95 UniRef50_A9GGP4 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 350 6e-95 UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax... 349 8e-95 UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae Re... 349 1e-94 UniRef50_B2K5T6 Type IV pilus secretin PilQ n=46 Tax=Enterobacte... 348 2e-94 UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thio... 348 3e-94 UniRef50_C8X4Y6 Type IV pilus secretin PilQ n=1 Tax=Desulfohalob... 346 8e-94 UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein ... 345 2e-93 UniRef50_C0GNC2 Type IV pilus secretin PilQ n=1 Tax=Desulfonatro... 344 3e-93 UniRef50_D0SET7 Type IV pilus biogenesis and competence protein ... 344 3e-93 UniRef50_C0QLC9 PilQ n=1 Tax=Desulfobacterium autotrophicum HRM2... 344 3e-93 UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=... 343 6e-93 UniRef50_B5YJ50 PilQ n=1 Tax=Thermodesulfovibrio yellowstonii DS... 343 7e-93 UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter p... 342 1e-92 UniRef50_C7LN99 Type IV pilus secretin PilQ n=1 Tax=Desulfomicro... 341 3e-92 UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax... 341 3e-92 UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Ta... 338 2e-91 UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax... 336 8e-91 UniRef50_Q0EXA5 Probable pilQ; fimbrial type-4 assembly signal p... 333 7e-90 UniRef50_A5WCG3 Type IV pilus secretin PilQ n=2 Tax=Bacteria Rep... 332 1e-89 UniRef50_A1HM79 Type II and III secretion system protein n=1 Tax... 330 5e-89 UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae Rep... 330 7e-89 UniRef50_Q1GYK8 Type II and III secretion system protein n=1 Tax... 329 2e-88 UniRef50_C6XCK3 Type II and III secretion system protein n=1 Tax... 328 3e-88 UniRef50_B8FHA0 Type IV pilus secretin PilQ n=1 Tax=Desulfatibac... 327 4e-88 UniRef50_B5S3N0 Gspd-related protein n=4 Tax=Ralstonia solanacea... 326 1e-87 UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiob... 325 1e-87 UniRef50_Q1IRM5 Type II and III secretion system protein n=1 Tax... 325 2e-87 UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax... 325 2e-87 UniRef50_C9RKD2 Type II and III secretion system protein n=1 Tax... 324 4e-87 UniRef50_B8DPS5 Type II and III secretion system protein n=4 Tax... 323 1e-86 UniRef50_D2RIL0 Type II and III secretion system protein n=2 Tax... 323 1e-86 UniRef50_B9Z6A5 Type II and III secretion system protein n=1 Tax... 320 6e-86 UniRef50_C6P0F2 Type II and III secretion system protein n=1 Tax... 320 8e-86 UniRef50_B3TCB2 Putative bacterial type II and III secretion sys... 318 2e-85 UniRef50_Q7MH82 Type IV pilus (Tfp) assembly protein PilQ n=9 Ta... 318 3e-85 UniRef50_C9LRH4 Putative secretin and TonB short domain protein ... 317 6e-85 UniRef50_Q1LE58 Type II and III secretion system protein n=6 Tax... 316 9e-85 UniRef50_D0ZFZ5 Type II secretory pathway, component HofQ n=2 Ta... 315 3e-84 UniRef50_A0LFN7 Type IV pilus secretin PilQ n=1 Tax=Syntrophobac... 313 7e-84 UniRef50_Q5P7D0 General (Type II) secretion pathway (GSP) D prot... 313 7e-84 UniRef50_B1XUD4 Type II and III secretion system protein n=1 Tax... 312 2e-83 UniRef50_B8E238 Type II and III secretion system protein n=1 Tax... 312 2e-83 UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citroba... 310 6e-83 UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gam... 309 1e-82 UniRef50_B5YDZ7 Bacterial type II and III secretion system prote... 309 1e-82 UniRef50_A8PP54 Putative fimbrial assembly protein PilQ n=1 Tax=... 308 3e-82 UniRef50_Q47JK8 Type II and III secretion system protein:NolW-li... 307 6e-82 UniRef50_Q0BFS7 Type II and III secretion system protein n=7 Tax... 306 8e-82 UniRef50_A6C2R4 Type IV pilin multimeric outer membrane protein ... 306 8e-82 UniRef50_C6WVN7 Type II and III secretion system protein n=1 Tax... 306 9e-82 UniRef50_Q1H1N3 Type II and III secretion system protein n=2 Tax... 305 2e-81 UniRef50_A3YI86 Type IV pili biogenesis protein PilQ n=1 Tax=Mar... 304 4e-81 UniRef50_P03668 Putative assembly protein ORF430 n=1 Tax=Pseudom... 303 7e-81 UniRef50_C8X4Q5 Type II and III secretion system protein n=1 Tax... 303 1e-80 UniRef50_D2QZA3 Type II and III secretion system protein n=1 Tax... 302 2e-80 UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desu... 300 4e-80 UniRef50_A6W2T5 Type II and III secretion system protein n=1 Tax... 300 7e-80 UniRef50_C4V5Y4 Fimbrial type IV assembly protein pilQ n=1 Tax=S... 299 9e-80 UniRef50_C1ZJR8 Type II secretory pathway, component PulD n=1 Ta... 295 2e-78 UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Synt... 293 6e-78 UniRef50_C6E2R8 Type II and III secretion system protein n=7 Tax... 293 7e-78 UniRef50_Q2S975 Type II secretory pathway, component PulD n=1 Ta... 292 2e-77 UniRef50_B1FCE7 Type II and III secretion system protein n=1 Tax... 291 3e-77 UniRef50_B1Y7J0 Type II and III secretion system protein n=1 Tax... 291 3e-77 UniRef50_C9KL82 Putative type IV pili biogenesis protein PilQ n=... 291 3e-77 UniRef50_B5SC46 General secretion pathway gspd-related protein n... 291 3e-77 UniRef50_A1WTW1 Pilus (MSHA type) biogenesis protein MshL n=1 Ta... 291 3e-77 UniRef50_Q2Y5U9 Type II and III secretion system protein n=1 Tax... 290 5e-77 UniRef50_B1Y7C9 Type II and III secretion system protein n=1 Tax... 290 6e-77 UniRef50_Q2BKX4 Putative MSHA biogenesis protein MshL n=1 Tax=Ne... 290 7e-77 UniRef50_A3ERG1 Putative general secretion pathway protein D n=2... 290 8e-77 UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamm... 289 1e-76 UniRef50_A7BV51 Bacterial type II and III secretion system prote... 289 1e-76 UniRef50_Q1NKF6 Type II and III secretion system protein:Secreti... 289 1e-76 UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Mari... 288 2e-76 UniRef50_C1TME7 Type II secretory pathway, component HofQ n=1 Ta... 287 4e-76 UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseu... 287 6e-76 UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gamm... 286 1e-75 UniRef50_B9XBV8 Type II and III secretion system protein n=1 Tax... 286 1e-75 UniRef50_P31701 General secretion pathway protein D n=27 Tax=Ent... 285 2e-75 UniRef50_D1Y3M3 Putative type IV pilus biogenesis protein PilQ n... 285 2e-75 UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gamm... 285 2e-75 UniRef50_D0I542 MSHA biogenesis protein MshL n=1 Tax=Grimontia h... 285 2e-75 UniRef50_A1WZM1 General secretion pathway protein D n=1 Tax=Halo... 285 2e-75 UniRef50_Q15ZI6 Pilus (MSHA type) biogenesis protein MshL n=2 Ta... 284 3e-75 UniRef50_A6FG34 Putative MSHA biogenesis protein MshL n=1 Tax=Mo... 284 3e-75 UniRef50_O80300 Virion export protein n=9 Tax=Inovirus RepID=G4P... 283 8e-75 UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Side... 282 1e-74 UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Synt... 282 1e-74 UniRef50_A8GJQ5 General secretion pathway protein D n=6 Tax=Ente... 282 2e-74 UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D prot... 281 3e-74 UniRef50_Q3SJB4 Type II secretion system protein D n=1 Tax=Thiob... 281 4e-74 UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax... 281 4e-74 UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n... 280 5e-74 UniRef50_Q48JN3 General secretion pathway protein GspD n=2 Tax=P... 280 8e-74 UniRef50_C7HZF2 General secretion pathway protein D n=1 Tax=Thio... 280 9e-74 UniRef50_C4L998 General secretion pathway protein D n=2 Tax=Bact... 279 1e-73 UniRef50_A1TYN1 Pilus (MSHA type) biogenesis protein MshL n=2 Ta... 279 1e-73 UniRef50_D1B5I4 Type II and III secretion system protein n=1 Tax... 279 1e-73 UniRef50_B1Y075 Pilus (MSHA type) biogenesis protein MshL n=1 Ta... 279 1e-73 UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-li... 279 1e-73 UniRef50_Q07WN6 Pilus (MSHA type) biogenesis protein MshL n=2 Ta... 279 1e-73 UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified... 279 1e-73 UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Pro... 278 2e-73 UniRef50_B1J8A0 Type II and III secretion system protein n=7 Tax... 278 2e-73 UniRef50_Q7NA54 Similarities with protein transport protein HofQ... 277 4e-73 UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Mari... 277 5e-73 UniRef50_A3ZUT9 Type IV pilin multimeric outer membrane protein ... 277 6e-73 UniRef50_C6XJ47 General secretion pathway protein D n=1 Tax=Hirs... 276 9e-73 UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cell... 276 9e-73 UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 T... 276 1e-72 UniRef50_Q0A5Z6 General secretion pathway protein D n=2 Tax=Ecto... 275 2e-72 UniRef50_Q3JD22 General secretion pathway protein D n=2 Tax=Nitr... 275 2e-72 UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyph... 275 2e-72 UniRef50_Q1YQU4 Putative general secretion pathway protein n=1 T... 275 3e-72 UniRef50_Q3A7J9 Type II and III secretion system protein n=2 Tax... 274 5e-72 UniRef50_Q221L0 Type II and III secretion system protein n=1 Tax... 274 5e-72 UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desu... 273 6e-72 UniRef50_C4UIB8 General secretion pathway protein D n=4 Tax=Yers... 273 6e-72 UniRef50_B2KC06 Type II and III secretion system protein n=1 Tax... 273 7e-72 UniRef50_C6CIN5 General secretion pathway protein D n=1 Tax=Dick... 273 8e-72 UniRef50_A8ZWZ5 General secretion pathway protein D n=2 Tax=Desu... 273 8e-72 UniRef50_B3R7X2 General Secretory Pathway protein D, type II sec... 273 8e-72 UniRef50_A1WZA7 Type II and III secretion system protein n=1 Tax... 273 1e-71 UniRef50_C5S7Y5 General secretion pathway protein D n=1 Tax=Allo... 273 1e-71 UniRef50_A8URL9 Putative type II secretion system protein n=1 Ta... 272 2e-71 UniRef50_A0YA35 Type II secretory pathway, component PulD n=1 Ta... 272 2e-71 UniRef50_Q1N2G1 Type II secretory pathway, component PulD n=1 Ta... 272 2e-71 UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acineto... 272 3e-71 UniRef50_Q1N1M8 Type II secretory pathway, component PulD n=1 Ta... 271 4e-71 UniRef50_A4BES0 Type II secretory pathway, component PulD n=1 Ta... 270 5e-71 UniRef50_A8A4B9 General secretion pathway protein D n=30 Tax=Esc... 270 5e-71 UniRef50_Q47VE8 MSHA biogenesis protein MshL n=19 Tax=Gammaprote... 270 5e-71 UniRef50_Q0VSG7 General (Type II) secretion pathway protein D n=... 270 5e-71 UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhiz... 270 7e-71 UniRef50_A4BG93 Type II secretory pathway, component PulD n=1 Ta... 269 1e-70 UniRef50_B6BQP5 Type II Secretion PilQ n=2 Tax=root RepID=B6BQP5... 269 1e-70 UniRef50_C1A7C5 Putative general secretion pathway protein D n=1... 269 1e-70 UniRef50_A1JPH4 General secretion pathway protein D n=28 Tax=Yer... 269 2e-70 UniRef50_Q8VPC8 Hypothetical type II secretion protein n=6 Tax=E... 269 2e-70 UniRef50_P03667 Virion export protein n=4 Tax=root RepID=G4P_BPIKE 268 2e-70 UniRef50_A1U289 General secretion pathway protein D n=4 Tax=Gamm... 268 2e-70 UniRef50_B8CZ92 Type II and III secretion system protein n=1 Tax... 268 3e-70 UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Coma... 267 4e-70 UniRef50_D0Z1T0 MSHA biogenesis protein MshL n=1 Tax=Photobacter... 267 4e-70 UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Arom... 267 6e-70 UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pse... 267 6e-70 UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobiu... 267 7e-70 UniRef50_P31700 General secretion pathway protein D n=5 Tax=Ente... 266 1e-69 UniRef50_Q47HN2 Type II and III secretion system protein:Secreti... 266 1e-69 UniRef50_C9RLY9 Type II and III secretion system protein n=1 Tax... 266 1e-69 UniRef50_Q04SX5 Type II secretory pathway component, protein D n... 266 1e-69 UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Coma... 266 1e-69 UniRef50_B8GXR3 Type II secretion pathway protein D n=3 Tax=Caul... 265 2e-69 UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphi... 265 2e-69 UniRef50_Q1JVV5 Type II and III secretion system protein n=1 Tax... 265 2e-69 UniRef50_A8EVV0 General secretion pathway protein D n=1 Tax=Arco... 265 2e-69 UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desu... 265 3e-69 UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyph... 265 3e-69 UniRef50_B0T7N8 General secretion pathway protein D n=1 Tax=Caul... 264 3e-69 UniRef50_Q21LN2 Type II and III secretion system protein n=1 Tax... 264 5e-69 UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Meth... 263 7e-69 UniRef50_A3WP66 Type II secretory pathway n=2 Tax=Idiomarina Rep... 263 7e-69 UniRef50_A1S2Q8 MSHA biogenesis protein MshL n=71 Tax=Gammaprote... 263 8e-69 UniRef50_C9M548 Putative bacterial type II/III secretion system ... 263 8e-69 UniRef50_O80264 Similar to Gene IV protein :Acc# A04268 n=3 Tax=... 263 8e-69 UniRef50_C6N6C5 Putative MSHA biogenesis protein MshL (Pilus typ... 263 9e-69 UniRef50_UPI0001C34749 hypothetical protein PretD1_16510 n=1 Tax... 263 9e-69 UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax... 263 1e-68 UniRef50_Q82WH1 General (Type II) secretion pathway (GSP) D prot... 262 1e-68 UniRef50_Q3A894 Putative type II secretion system protein n=1 Ta... 262 1e-68 UniRef50_C4ZLP2 Type II and III secretion system protein n=1 Tax... 262 2e-68 UniRef50_B7RHZ1 General secretion pathway protein D n=1 Tax=Rose... 261 3e-68 UniRef50_Q2JVP0 Putative type IV pilus secretin PilQ n=1 Tax=Syn... 261 3e-68 UniRef50_Q1V0G7 Type II Secretion PilQ n=2 Tax=Candidatus Pelagi... 261 3e-68 UniRef50_Q0AIN2 Type II and III secretion system protein n=3 Tax... 261 3e-68 UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burk... 261 3e-68 UniRef50_Q7NHU7 Glr2438 protein n=1 Tax=Gloeobacter violaceus Re... 261 4e-68 UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax... 261 4e-68 UniRef50_A0YBF4 Type II and III secretion system protein n=1 Tax... 260 5e-68 UniRef50_B0UFJ1 General secretion pathway protein D n=4 Tax=Meth... 260 5e-68 UniRef50_C4K9Q5 General secretion pathway protein D n=1 Tax=Thau... 260 6e-68 UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Bur... 260 6e-68 UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax... 260 7e-68 UniRef50_B9K747 ComE protein n=6 Tax=Thermotogaceae RepID=B9K747... 260 8e-68 UniRef50_C1SHL2 General secretion pathway protein D n=1 Tax=Deni... 260 9e-68 UniRef50_Q4UYQ6 Type II secretion system protein D n=6 Tax=Prote... 260 1e-67 Sequences not found previously or not previously below threshold: UniRef50_C9LMV3 Bacterial type II and III secretion system prote... 312 1e-83 UniRef50_C6HW33 Putative general secretion pathway protein D n=1... 279 1e-73 UniRef50_C7R8G0 General secretion pathway protein D n=1 Tax=Kang... 269 1e-70 >UniRef50_P34749 Protein transport protein hofQ n=114 Tax=Enterobacteriaceae RepID=HOFQ_ECOLI Length = 412 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 412/412 (100%), Positives = 412/412 (100%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL Sbjct: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR Sbjct: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 Query: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ Sbjct: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN Sbjct: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA Sbjct: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL Sbjct: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE Sbjct: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 >UniRef50_A1SRB5 Type IV pilus secretin PilQ n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRB5_PSYIN Length = 689 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 155/398 (38%), Positives = 235/398 (59%), Gaps = 10/398 (2%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 A + + ++L D+PV VLQ +A+ NLV++ VSG ++L L DVPW+QAL ++K Sbjct: 291 SAYQGKAISLNFQDIPVRTVLQLIADFNGFNLVITDSVSGNITLRLDDVPWEQALDIILK 350 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 GL +GN+L + Q + PL + I + YA +++ Sbjct: 351 VKGLGKSLDGNVLMIAPAVELAAKKREQLESENAVANLAPLYSEFIQVNYAKVADISAML 410 Query: 137 EK----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 LLS +G+++VD RTN LL++D + A+++ + +D+PV QV + A +VT+++ Sbjct: 411 SSDKTSLLSERGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQVVIEARMVTVDD 470 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI-NGRLLDLELSAL 251 ELGVKW + + V +L +L A + F + + NG +LDLELSAL Sbjct: 471 SVSEELGVKWGMTSTSSS----TVDSLNVNLPATDAAGTIAFKLAKFSNGDILDLELSAL 526 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVL 311 E + + +IIASPR+ ++ Q A I+QG+EIPY V S SGATSV FK+AVL + VTP + Sbjct: 527 ESENKAEIIASPRITTANQQTAYIEQGTEIPY-VESASSGATSVAFKKAVLSLTVTPQIT 585 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 ++ L L I+Q+ G+ + GE +AID Q+I TQV V +GETL LGGI+ ++N Sbjct: 586 PDNKVILDLEITQDTVGETVSAGTGEAVAIDTQKIGTQVLVGNGETLVLGGIYQQRNSIA 645 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VPLLGDIP+ G LFR +E+ + EL++F+TPR+V Sbjct: 646 VSKVPLLGDIPYLGALFRSTNEENTKSELLIFVTPRIV 683 >UniRef50_B1J2J3 Type IV pilus secretin PilQ n=5 Tax=Pseudomonas RepID=B1J2J3_PSEPW Length = 422 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 152/418 (36%), Positives = 243/418 (58%), Gaps = 12/418 (2%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MK +AALL M + + + ++L DV V VLQ LA+ +NLV S V G+++L Sbjct: 5 MKWLVAALLPMPLLAATPYRGEPISLNFQDVEVRLVLQVLADYAGINLVASDTVQGSITL 64 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 L DVPW QAL+ V++S GL R+EGN+L V + PL Sbjct: 65 RLQDVPWDQALELVLRSKGLGRREEGNVLLVAPAVELAEQALGARMGLELEAQSRPLRRE 124 Query: 121 SITLQYADAGELAKAG------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 + + +A+A ELA+ + +L+ +GS++VD RTN L+ + L+ L Q VAQ+ Sbjct: 125 LLPIHHAEASELAELLLATLADDGILTGRGSLSVDVRTNTLVAHQPEDRLAELRQLVAQL 184 Query: 175 DLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGF 234 D+PV QVE+ A IV N LGV+W A +G+ + DL + A + +GF Sbjct: 185 DVPVRQVEIEARIVEANVDYENSLGVRWGPRLYSEAPALGK--DVFVDLGMERAGSSIGF 242 Query: 235 NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 + R G LLDLELSA+E+ +II+ P+++ ++ + A I +G+E+PYQ ++ +SGATS Sbjct: 243 GVLR-GGVLLDLELSAMEKTGNGEIISQPKVVTANNETARILKGTEVPYQETT-KSGATS 300 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 V F+EA L +EVTP + G++ + + ++++ P V A +V I K E+ +V V Sbjct: 301 VTFREASLSLEVTPQITPDGKVIMTVKVTKDEPDFV--NALNDVPPIRKNEVNAKVRVAD 358 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 GET+ +GG+++ + D VP GD+P+ G+LFR D ++++ EL+VF+TPR+++ + Sbjct: 359 GETIVIGGVYSTTQNNVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIMNDQ 416 >UniRef50_Q1QZY4 Type II and III secretion system protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZY4_CHRSD Length = 668 Score = 389 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 145/418 (34%), Positives = 228/418 (54%), Gaps = 25/418 (5%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + ++L ++ V +VL L++ LN+V S V G+V+L+L VPW QAL + Sbjct: 250 ASPTYTGEPISLNFQNIQVREVLSVLSDFSGLNIVASDSVQGSVTLNLQQVPWDQALALI 309 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 ++S GL +R+ G+++ V + + +A+++ PL + ++YA A +LA Sbjct: 310 LQSHGLASRRNGDVIVVAPVDELAQMERQTLENRAQSEQLAPLVTDYVQVRYAKATDLAA 369 Query: 135 AGE-----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 LLS +G +TVD+RTN LL+RD + L+++ + ++D+PV QV++ A IV Sbjct: 370 MLRGSEGFGLLSERGRVTVDERTNTLLVRDTREQLASIRGMLERLDVPVRQVQIEARIVI 429 Query: 190 INEKSLRELGVKWTLA-------DAQHAGGVGQVTTLGSDLSVATATTHVG--------F 234 + + RELGV W ++ D G V G++ A + +G F Sbjct: 430 ARDTASRELGVNWGISQRQGVTFDDDGVGSVVDRNPSGANRGSAGLSVDLGDSDGSGSTF 489 Query: 235 NIGRINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 + G ++G LLDLEL ALE + + I+ P+++ ++ + A IKQG EIPYQ S+ SGAT Sbjct: 490 SFGYLSGDVLLDLELRALESEGKSQTISQPKVITANQKTAVIKQGQEIPYQESTS-SGAT 548 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 +VEFKEAVL +E TP + G I + L I+ + + AID IETQV V Sbjct: 549 NVEFKEAVLSLEATPQITPDGSIVMDLLINNDTVAD---NSYDGAPAIDTNSIETQVLVD 605 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G T+ LGGI T + P LGD+P G LFR+ + +E+ EL++FITP ++ Sbjct: 606 DGATVVLGGILTSEQLRNLYKTPFLGDLPLIGSLFRYTQESNEKVELLIFITPTIIGD 663 >UniRef50_A0KN30 Type IV pilus secretin PilQ n=54 Tax=Gammaproteobacteria RepID=A0KN30_AERHH Length = 733 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 158/423 (37%), Positives = 241/423 (56%), Gaps = 29/423 (6%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + + + ++L D+PV VLQ +A+ LNLV + VSG ++L L VPW+QAL ++K Sbjct: 310 KQYQGKPISLNFQDIPVRTVLQLIADFNNLNLVTTDSVSGNITLRLDGVPWEQALDIILK 369 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 GL R + NIL V +Q + + PL + + YA A E+A Sbjct: 370 VRGLDKRLDNNILLVAPAEEIAAREKQQLESRNQVADLAPLYTEYLQINYAKASEVAALL 429 Query: 137 EK----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 LLS+KG+++VD+RTN L+++D +S +++ + +D+PV QV + A +VTI++ Sbjct: 430 SSESTKLLSSKGAVSVDERTNVLVVKDTADVISNIKRMLDILDIPVKQVVIEARMVTIDD 489 Query: 193 KSLRELGVKWTLADAQHAGGVGQVT-----------------------TLGSDLSVATAT 229 LGV+W + G T L +L V A Sbjct: 490 GFDEALGVRWGVTKNDGHGNSTSGTIEGNDSSGNNNGGSTITRPGVDDRLNVNLPVTNAA 549 Query: 230 THVGFNIGRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 + F + R+ +G LLDLELSALE++ + +IIASPR+ ++ +PA I+QG+EIPY V S Sbjct: 550 GTLAFQVARLADGTLLDLELSALEKESKAEIIASPRVTTANQKPALIEQGTEIPY-VESS 608 Query: 289 ESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 SGATSV FK+AVL ++VTP + R+ L L ++Q+ G+ + G+ ++I+ Q I T Sbjct: 609 SSGATSVTFKKAVLSLKVTPQITPDNRVILDLTVTQDTKGETVPTGTGDAVSINAQSITT 668 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 QV V +GETL LGGI+ + KS VPLLGDIP G LFR E+++REL++F+TP++ Sbjct: 669 QVLVNNGETLVLGGIYQQTIKSDVSKVPLLGDIPGLGVLFRKTTSENKKRELLIFVTPKI 728 Query: 409 VSS 411 V+ Sbjct: 729 VTD 731 >UniRef50_D0L240 Type IV pilus secretin PilQ n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L240_HALNC Length = 729 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 130/447 (29%), Positives = 226/447 (50%), Gaps = 49/447 (10%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 G + +++TL D+ + +LQ +A+ N+VVS DV G++SL L +VPW QAL + Sbjct: 276 GEKKYTGERLTLKFQDIQIRPLLQLIADFTGNNIVVSDDVKGSISLRLENVPWDQALDLI 335 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 + + GL R+ GN++ V A + + ++Q PL I + YA A ++ K Sbjct: 336 LTTKGLSMRKNGNVMYVAPTADIVARDKAEIEARQQSQQLAPLSTDIIQINYAKADDIYK 395 Query: 135 AGEK-------------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 E +S +GS+TVD R+N L++ D +AL + + ++D Sbjct: 396 LLESASKTGKTSADGKGGDTAQRFISDRGSVTVDPRSNSLIVTDTASALDRIRDLIHKLD 455 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVG-QVTTLGSDLSVATATTHVGF 234 PV QV + IV + R+LGV+W + + G + + ++ T+ G Sbjct: 456 KPVKQVLIETRIVIATDNFARQLGVRWGVQAGFNRGNSTFGLGSTAPLVASGTSLPTAGA 515 Query: 235 NIGRIN---------------------------GRLLDLELSALEQKQQLDIIASPRLLA 267 + G + LLDLELSAL+ + +I++SP+++ Sbjct: 516 STGTVGTAPTDWMVNTPISGTPAGSLGLAILGSNVLLDLELSALQSEGTGEIVSSPKVIT 575 Query: 268 SHLQPASIKQGSEIPYQVSSGESG--ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQN 325 ++ A I QG+EIPY + G + +V FK+AVL EVTP + I + + + ++ Sbjct: 576 TNGHTALISQGTEIPYIATQTAGGVASNTVSFKKAVLSTEVTPQITPNNNIIMDIDVKKD 635 Query: 326 VPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFG 385 P I+ +E++T+VEVK+GET+ LGGI+ +N + + VP GD+P G Sbjct: 636 EPDYTNLLPGTTNPPINTREVKTKVEVKNGETVVLGGIYQFENNNSINKVPFFGDLPGIG 695 Query: 386 QLFRHDGKEDERRELVVFITPRLVSSE 412 LF++ +++R EL++F+TP++++S+ Sbjct: 696 NLFKNKEVKNQRLELLIFVTPKIINSD 722 >UniRef50_C7R7W7 Type IV pilus secretin PilQ n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7W7_KANKD Length = 701 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 144/413 (34%), Positives = 238/413 (57%), Gaps = 23/413 (5%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 + +TL D+ + +L L + +N+V+S DV G+++L+L +VPW QAL ++KS Sbjct: 287 TYTGETLTLQFQDMDLKAILHTLGDFAGINIVISDDVQGSMALNLVNVPWDQALDIILKS 346 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL RQEGN++ + ++ + + PL I + YA A E+A + Sbjct: 347 KGLGKRQEGNVMMIAPADIIAQREQQELEANKQQEELAPLRTELIQVNYAKAAEIAAILQ 406 Query: 138 K-------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELS 184 +LS +GS+T D+RTN +L++D T + + + VAQ+D+PV QV + Sbjct: 407 AGLGGGSGDGKSVGILSERGSVTTDQRTNTILVQDVSTKIEDVRRLVAQLDIPVRQVLIE 466 Query: 185 AHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI-NGRL 243 A IVT ++ R+LG ++ ++D ++G V +L +A +G + R+ +G + Sbjct: 467 ARIVTADDGFARDLGSRFGVSDVMNSGEVN--GDFNVNLPIANPAGSLGLSFARLQDGIV 524 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLG 303 +D+ELSALE + + +++ASP+++ ++ + A IK G EIPY SGA +V+FKEAVL Sbjct: 525 VDMELSALESENRGEVVASPKVITANQKEAFIKAGEEIPYLQG-ASSGAANVQFKEAVLE 583 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVL------QQADGEVLAIDKQEIETQVEVKSGET 357 ++VTP + GR+ L L I+Q+ G+ + AI+ QEI TQV V +GET Sbjct: 584 LKVTPQITPDGRVILDLAITQDTRGENVIFTSPDGGGSSGAPAINTQEIGTQVLVDNGET 643 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + LGGIF + + VPLLGDIP G LF++ +ED ++EL++F+TP+++ Sbjct: 644 IVLGGIFQHRTTYDESKVPLLGDIPLLGWLFKNTQREDTKQELLIFVTPKIIE 696 >UniRef50_Q39X07 Type II and III secretion system protein:NolW-like:Secretin/TonB, short-like n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39X07_GEOMG Length = 870 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 124/405 (30%), Positives = 207/405 (51%), Gaps = 15/405 (3%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 G + ++VTL D + ++ Q +AE LN +V DV+GT+SL L +VPW QAL + Sbjct: 470 GKKVYTGRRVTLEFSDADIRKIFQLIAEVSNLNFIVGDDVTGTISLKLVNVPWDQALDVI 529 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +++ GL +++GNI+ + + ++ + + + L+ + YA G++ Sbjct: 530 LENKGLGMQRDGNIVQIRPKSKIMTLADEEQKAKKSREQGMELKTEVFDVNYAAVGDVVT 589 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 L S +G ++ D RTNR++++D ++ + + +D+P QV + A IV + Sbjct: 590 QFNTLKSERGMISQDARTNRVIVKDIAPVVAEMRNLLKSLDIPEKQVMIEARIVEASSTV 649 Query: 195 LRELGVKWTLADAQHA---------GGVGQVTTLGSDLSVATATTHVGFNIGR-INGRLL 244 +ELG++W + G G +T L G G+ I+G L Sbjct: 650 TQELGIQWGIHARDANTIGVTNADVGFGGILTGLAPTAGTFGPGAAAGITFGKLISGGSL 709 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGM 304 DL+LSAL +++ II+SP+++ + + A I QG IPY S E T EF EA L + Sbjct: 710 DLKLSALASGERIKIISSPKVVTLNNKAAKISQGQSIPYSTVSAEGTKT--EFVEAALTL 767 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 EVTP + G I +K+ + N G V AI+K+E T++ V++GET +GGI+ Sbjct: 768 EVTPHIASDGSISMKIKATNNSAAPAPT---GAVPAINKKEATTELLVRNGETTVIGGIY 824 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 + VP DIP G LF+ + + EL++FITP++V Sbjct: 825 VDNDSQADQGVPFFKDIPLLGWLFKSSNTQKIKNELLIFITPKIV 869 >UniRef50_C0N3G3 Type IV pilus secretin PilQ subfamily, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3G3_9GAMM Length = 672 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 147/428 (34%), Positives = 235/428 (54%), Gaps = 41/428 (9%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L ++ V VLQ LA+ +NLV S V G ++L L +VPW QAL ++K+ Sbjct: 245 YSGEKLSLNFQNIEVRAVLQLLADFTGMNLVTSDTVKGNLTLRLKNVPWDQALDIILKTK 304 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 GL RQ GN+L V A ++ Q + PL + +++A A LA Sbjct: 305 GLAMRQNGNVLMVAPAAEIAAREKQELEAQKQLVELEPLYTEIVEIKFAKADLLATLLRT 364 Query: 139 ------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 LS +GS+T+D RTN LL+RD L + Q + ++D PV QV + + Sbjct: 365 DGKQGGNSGQSGFLSPRGSITIDDRTNSLLIRDTADNLVDIRQVIDELDKPVRQVLIESR 424 Query: 187 IVTINEKSLRELGVKWTLADAQHAGGVGQVTT-----------------------LGSDL 223 IV N +ELGV++ + + G G + L +L Sbjct: 425 IVIANNDFNKELGVRFGTSAQSNTLGAGSSGSLTGLSTNPNNDDQIRANSVVGNDLNVNL 484 Query: 224 SVATATTHVGFNIGRIN-GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 V+ + +G + ++ G +L+LELSA++ + + ++I+SPR++ S+ Q A+I+QG+EIP Sbjct: 485 PVSNPSGSIGLALAKLPLGMILELELSAMQAEGKGEVISSPRVITSNQQQATIEQGTEIP 544 Query: 283 YQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID 342 YQ ++ SGAT+V FKEAVL ++VTP + RI + L +S++ G+V V +ID Sbjct: 545 YQEATS-SGATNVSFKEAVLKLDVTPQITPDDRIVMDLEVSKDEVGEVF----LGVPSID 599 Query: 343 KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVV 402 + ++TQV V +GET+ LGGI+ + + VP GD+P+ G LF++ KED +REL+V Sbjct: 600 TRSVKTQVLVDNGETVVLGGIYEQSTNDNVERVPFFGDLPYVGFLFKNTFKEDRKRELLV 659 Query: 403 FITPRLVS 410 F+TP++V Sbjct: 660 FVTPKIVK 667 >UniRef50_C8QE32 Type IV pilus secretin PilQ n=1 Tax=Pantoea sp. At-9b RepID=C8QE32_9ENTR Length = 421 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 200/413 (48%), Positives = 279/413 (67%), Gaps = 5/413 (1%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MK W+ L + P A Q+++L+ DD PV +LQALA+ ++ NL+++P V G +SL Sbjct: 4 MKVWLLLFLGLSAP--LHASEQRLSLVFDDTPVENILQALADYQQTNLLIAPGVEGRLSL 61 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 L D+ W++AL V + A L QE +L ++ +WQ + +AE+ Q + L + Sbjct: 62 RLEDIEWQRALALVARLARLSVVQEEGVLLIYPESWQQWQAQKIQAEREEQQQQIALTQQ 121 Query: 121 SITLQYADAGELAKAGE---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 ++T YA+AG+ A++ + L++ +GS+TVD RTN LLLRD AL +W+ +DLP Sbjct: 122 TVTFHYANAGDAARSLQAERSLMTPRGSVTVDSRTNSLLLRDTPRALQETVRWLNALDLP 181 Query: 178 VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIG 237 + QVELSAHIVTI+E+ LRELGV W L+ A+ + L L+V+ +G +G Sbjct: 182 LEQVELSAHIVTISEEHLRELGVNWGLSPAEEVMQTLRNPQLAIPLAVSNPAFRMGVTLG 241 Query: 238 RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 I G LL+LELSALEQ+ Q+DIIASPRL SH Q A+IKQG+EIPY+V SG SGAT++EF Sbjct: 242 HIGGDLLNLELSALEQESQIDIIASPRLFTSHQQTATIKQGTEIPYEVKSGNSGATAIEF 301 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 KEAVLGMEVTP VL GRI+LKL +SQN+PG+ + + + L+IDKQEI+TQV ++ GET Sbjct: 302 KEAVLGMEVTPVVLGNGRIQLKLRLSQNMPGRSINTGEHQTLSIDKQEIDTQVTLRDGET 361 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 LALGGIF ++ ++ VP LG +P G LFRH E +++ELV+FITPRLV Sbjct: 362 LALGGIFQQQRAQNENRVPWLGKLPVVGNLFRHQTDEHKKKELVIFITPRLVR 414 >UniRef50_A1TYV8 Type IV pilus secretin PilQ n=3 Tax=Gammaproteobacteria RepID=A1TYV8_MARAV Length = 704 Score = 382 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 140/423 (33%), Positives = 219/423 (51%), Gaps = 33/423 (7%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 +K++L D+ V VLQ +A+ LNLV S V G+++L L +VPW QAL ++K+ Sbjct: 284 PYTGEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVGGSITLRLQNVPWDQALDLILKT 343 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL RQ GN+L V + + P+ I + YA A ++ + Sbjct: 344 KGLDKRQIGNVLLVAPAEEIAAREKLELETNKQIAELAPVRLDIIQVNYAKAADVVALIQ 403 Query: 138 ---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +L+S++G ++ D RTN + +R+ L + + V+ D+PV QV + A IV Sbjct: 404 ADEELISSRGFVSSDARTNTISVRETAEKLEEIRRLVSTWDVPVRQVSIEARIVRAQTNV 463 Query: 195 LRELGVKWTLADAQHAG---------------------GVGQVTTLGSDLSVATATTHVG 233 +LGV+W A G G + L V + G Sbjct: 464 AEDLGVRWGGAAYNVDGDDVITVGGSLGTLQEARDAASGGSNTISFPGALGVDLGVSGDG 523 Query: 234 FNIGRIN----GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 + I L+DLELSALE + ++++ PR++ + Q ASIK G EIPYQ ++ Sbjct: 524 ASSFAIGWGSDDFLVDLELSALESDGRAEVVSQPRVVTADRQTASIKSGEEIPYQEATS- 582 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 SGAT++EFKEAVL +EVTP + +I + L ++Q+ G+V + +I+ E+ TQ Sbjct: 583 SGATNIEFKEAVLSLEVTPQITPDDKIIMDLVVNQDSRGEVTA----GIPSINTNEVTTQ 638 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V V +GET+ LGGIF + + P LGDIP+ G+LF+ DER EL++FITP+++ Sbjct: 639 VLVANGETVVLGGIFQSEVATQTTKTPFLGDIPYLGRLFKRTEHIDERSELLIFITPKII 698 Query: 410 SSE 412 ++ Sbjct: 699 KND 701 >UniRef50_B9M3I8 Type IV pilus secretin PilQ n=2 Tax=Geobacter RepID=B9M3I8_GEOSF Length = 911 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 127/405 (31%), Positives = 209/405 (51%), Gaps = 19/405 (4%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + +KVTL D + ++ Q +AE LN +++ DV+GT+S+ L +VPW QAL ++ Sbjct: 515 KVYSGRKVTLEFSDADIRKIFQLIAEVSNLNFLIADDVTGTISIKLVNVPWDQALDVILD 574 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + GL +EGNI+ + A + + A + + + L + YA ++A Sbjct: 575 TKGLGMLKEGNIVQIKPKAKMQSQADEEMATKKARERGMELRTEIFDVNYAAVTDIATQF 634 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 L S +G ++ D RTNR++++D TA+ + + +D P QV + A IV + +R Sbjct: 635 GTLKSDRGIISTDARTNRVIVKDITTAIEDMRMLLKSLDTPEKQVMIEARIVEASTSFVR 694 Query: 197 ELGVKWTLADAQHA----------GGVGQVTTLGSDLSVATATTHVGFNIGRINGRL-LD 245 +LGV+W + + G G + + VG + G++ + LD Sbjct: 695 DLGVQWGIHYIDGSASVAGISRLDTGFGGQVAIAPTSGTSGPGAAVGMSFGKLASNIQLD 754 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGME 305 + LSA Q+ I+++PR++ + +PA I QG+ IPYQ +S E T EF EA L +E Sbjct: 755 MRLSAAVTADQIKIMSTPRVVTLNNKPAKISQGASIPYQTTSAEGTKT--EFVEAALTLE 812 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 VTP + G I +K+ S N G I+K+E T++ +K+GET +GGI+ Sbjct: 813 VTPHITSDGSIGMKIKASNNS------AGTGSPPPINKKEATTELLIKNGETTVIGGIYV 866 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + VP L DIP G LF+ + K + EL++FITP++VS Sbjct: 867 DSDTESDKGVPFLQDIPLLGWLFKSNTKNKSKNELLIFITPKIVS 911 >UniRef50_B5E8I3 Type IV pilus secretin PilQ n=4 Tax=Geobacter RepID=B5E8I3_GEOBB Length = 946 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 126/407 (30%), Positives = 215/407 (52%), Gaps = 19/407 (4%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 P + ++VTL D V ++ Q +AE LN +++ DV+GT+S+ L +VPW QAL Sbjct: 547 PAKKVYTGRRVTLEFSDADVRKIFQLIAEVSNLNFLIADDVTGTISIKLVNVPWDQALDV 606 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 ++ + GL +EGNI+ + + N + A + A+ + L+ + YA ++A Sbjct: 607 ILDAKGLAMVREGNIVQIKPRSKMQNQADEELAAKKAAERLMELKTMVFEVNYASVNDVA 666 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 L S +G +T D+RT+R++++D +TAL+ ++ + +D P QV + A IV Sbjct: 667 MQFGMLKSDRGVITKDERTSRVIVKDIQTALNDMKALLKTLDAPEKQVMIEARIVEATST 726 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSV----------ATATTHVGFNIGRINGRL 243 R+LGV+W L+ + V + ++ + +G + G++ + Sbjct: 727 FTRDLGVQWGLSYRDGSASVAGINSVDTGFGGVVSAAGPGSSGAGGLGLGMSFGKLTSNI 786 Query: 244 -LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVL 302 LD+ L+A Q+ II++P+++ + + A I QG IPYQ +S E T EF EA L Sbjct: 787 KLDMRLAAAATIGQVKIISTPKVVTLNNKAAKISQGQSIPYQTTSAEGTKT--EFVEAAL 844 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 +EVTP + G + +K+ S N PG G I+K+E T++ V +G+T +GG Sbjct: 845 TLEVTPHITADGSVSMKIKASNNSPG------TGSPPPINKKEATTELVVSNGDTTVIGG 898 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 I+ + VP L DIP G LF+ + K+ + EL++FITP++V Sbjct: 899 IYVDSDTESDTGVPFLSDIPLLGWLFKSNSKQKTKTELLIFITPKIV 945 >UniRef50_A8GZ28 Type IV pilus secretin PilQ n=20 Tax=Shewanella RepID=A8GZ28_SHEPA Length = 688 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 149/416 (35%), Positives = 238/416 (57%), Gaps = 23/416 (5%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + + ++L ++ V VLQ +A+ NLV S V G ++L L DVPW QAL +++ Sbjct: 271 KKYDGRSLSLNFQNISVRTVLQIIADYNNFNLVTSDTVEGDITLRLDDVPWDQALDLILQ 330 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + GL R EGNIL V I +++ + PL + + + YA A ++A Sbjct: 331 AKGLDKRIEGNILMVAPIEEIAIRESQELKNMQEVKELAPLYSEYLQINYAKAVDIAALL 390 Query: 137 E----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 + LL+++GS+ VD+RTN LL++D + L + + + +D+P+ QV + A +VT+ + Sbjct: 391 KGEDSSLLTSRGSVAVDERTNTLLVKDTEETLENIHRLIEVLDIPIKQVLIEARMVTVKD 450 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVA-----------------TATTHVGFN 235 +LGV+W + D Q G D++ T + F+ Sbjct: 451 DVSEDLGVRWGVTDQQGDKGTSGSLEGAGDIANGIVPSLSDRLNVNLPAAVANPTSIAFH 510 Query: 236 IGRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 + ++ +G +LDLELSALEQ+ + +IIASPR+ S+ + A I+QG EIPY +S SGAT+ Sbjct: 511 VAKLADGTVLDLELSALEQENKGEIIASPRITTSNQKAAFIEQGVEIPYVEASS-SGATT 569 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 V FK+AVL + VTP + R+ L L I+Q+ G+ + G+ ++ID Q I TQV V Sbjct: 570 VTFKKAVLSLRVTPQITPDNRVILDLEITQDSQGKTVDTPTGQAVSIDTQRIGTQVLVDH 629 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 GET+ LGGI+ ++ S VP+LGDIP+ G +FR ++ER+EL++F+TP++VS Sbjct: 630 GETIVLGGIYQQQLISRVSKVPILGDIPYLGFMFRSTSDKNERQELLIFVTPKIVS 685 >UniRef50_B9MDF0 Type IV pilus secretin PilQ n=2 Tax=Comamonadaceae RepID=B9MDF0_DIAST Length = 696 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 134/425 (31%), Positives = 218/425 (51%), Gaps = 36/425 (8%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 A +K++L ++ V +LQ +A+ N+V S V+G ++L L DVPW QALQ ++ + Sbjct: 272 AYSGEKLSLNFQNIEVRSLLQVIADFTNFNIVTSDTVTGALTLRLKDVPWDQALQIIMDA 331 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG- 136 GL R+ G +L + + + Q PL ++ L YA A ++ Sbjct: 332 KGLGMRKSGTVLWIAPKDEIDERTKKDYEAALAIQKLEPLRTQAFQLNYAKAADMVTQLT 391 Query: 137 -------------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 + LS +GS + RTN+L + D L + Q +A +D+PV QV + Sbjct: 392 MSSQGGSSTSGYSNRFLSDRGSAISEPRTNQLFVTDTSAKLEEVRQLLATLDVPVRQVMI 451 Query: 184 SAHIVTINEKSLRELGVKWTLADAQHA--------------GGVGQVTTLGSDLSVATAT 229 A IV + R LGV+ GG G + S++ + Sbjct: 452 EARIVEARDTFGRSLGVRLGGGSRTGGSAVGGTYDNVAGPTGGSGMSPFVSLPASLSGVS 511 Query: 230 THVGFNIGRINGR---LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 T F + N L LELSA+E Q I++SPRL+ + A I+QG+E PY V Sbjct: 512 TVGSFALSIFNSNASRFLSLELSAMEADGQGKIVSSPRLITADQTKALIEQGTEYPYSV- 570 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 + +GAT++ FK+AVL +EVTP + +G I L L ++++ G+ Q AID + I Sbjct: 571 TAPNGATTIAFKKAVLKLEVTPQITPEGNIILDLDVNKDSRGESTTQGV----AIDTKHI 626 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 +TQV +++G T+ +GGIF + + ++ +P+LGD+P G LF++ KE +RE++VFITP Sbjct: 627 KTQVLIENGGTVVIGGIFEMEETNQENKIPVLGDVPVVGNLFKNRTKESTKREMLVFITP 686 Query: 407 RLVSS 411 ++++ Sbjct: 687 KVITD 691 >UniRef50_Q7NZU2 Type 4 fimbrial biogenesis protein PilQ n=2 Tax=Chromobacterium group RepID=Q7NZU2_CHRVO Length = 697 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 136/430 (31%), Positives = 219/430 (50%), Gaps = 34/430 (7%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 G K K++L ++ V VLQ +AE LN+V S V+G ++L L DVPW QAL Sbjct: 265 AAGKPQYKGDKLSLNFQNIEVRTVLQVIAEFTGLNVVTSDSVTGNITLRLKDVPWDQALD 324 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 +++S GL R+ GNI+ + + + + + PL + + L+Y A + Sbjct: 325 LILQSKGLDQRRNGNIIQIAPRDELLARDKQVQEARQQLATLEPLRSETFVLRYRSAEDF 384 Query: 133 AKAG---------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 K E LLS +GS+ +D +TN L++ D TA+ + + + D+PV QV + Sbjct: 385 KKVLDGDNNSGKKESLLSERGSVLIDPKTNTLIVNDIGTAIDKIRDVITKTDIPVKQVLI 444 Query: 184 SAHIVTINEKSLRELGVKWTLADAQHAGGVGQ----------------------VTTLGS 221 A IV + R+LG+K T G + T G Sbjct: 445 EARIVEATDNWERDLGIKLTYDRMDPKGIISGNPLGTNVNNVTNLNNNQPYVIQTTPAGV 504 Query: 222 DLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEI 281 +L +AT + + +L LEL A++ + + II+SPR++ + Q ASI+QG+EI Sbjct: 505 NLPIATPYGTLSALYNVGHSVILGLELQAMQAEDKGRIISSPRVMTADRQEASIEQGTEI 564 Query: 282 PYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAI 341 PYQ +S SGATSV FK+AVL + V P + + + + ++++ ++ Sbjct: 565 PYQEASS-SGATSVSFKKAVLRLNVKPQITPDNHVIMDITVNKDSANFEKTVNG--TPSL 621 Query: 342 DKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELV 401 ++I TQV V++G T+ LGGI+ ++ + VP LGDIP G LFR K D+R EL+ Sbjct: 622 STEKIITQVLVENGGTVVLGGIYQQQLNDVINKVPFLGDIPLLGALFRSSQKIDKRSELL 681 Query: 402 VFITPRLVSS 411 +FITP++++ Sbjct: 682 IFITPKVIND 691 >UniRef50_Q5X6H2 Type IV pilus (Tfp) assembly protein PilQ n=6 Tax=Legionella RepID=Q5X6H2_LEGPA Length = 698 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 135/421 (32%), Positives = 231/421 (54%), Gaps = 30/421 (7%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 Q ++++L ++ + VLQ LA+ +N+VVS V G ++L L D+PW QAL ++ Sbjct: 266 QVFTGKRISLNFQNISIRAVLQLLADFTGINMVVSDKVQGDITLRLNDIPWDQALDIILT 325 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + GL R++GN++ + + A + Q Q + P+ + I + YA A ++A Sbjct: 326 TQGLDKRRKGNVMLIDTKASMDKMEEEQLKSQQTIEKLEPIRSDLIQINYAKAADIAVLI 385 Query: 137 E----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 + LLS +G ++VD RTN + ++D T + + + + Q+D+PV QV + A IV + + Sbjct: 386 KDKQNSLLSDRGKISVDARTNTIWIQDTGTKIEEVRELIKQLDIPVKQVLIEARIVEVTK 445 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTT-----------------LGSDLSVATATTHVGFN 235 +++G++W ++ H G + L DL+ A T + Sbjct: 446 DFSQDIGIRWGVSRPTHLSGTLEGANELARGTAPANVVPLERRLNLDLAAAPLTGATPAS 505 Query: 236 IGRI-----NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES 290 +G + LLDLELSALE + + ++I+SPRL+ ++ Q A I+ G EIPYQ ++ S Sbjct: 506 VGIALAKLNDNILLDLELSALESEGRAELISSPRLITTNQQAAVIESGEEIPYQEATS-S 564 Query: 291 GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQV 350 GAT+V FK+AVL ++VTP + G+I + L I+Q+ P V AI +EI+T V Sbjct: 565 GATAVAFKKAVLSLKVTPQITPDGKILMDLQINQDTPSPQTFLG---VPAIITKEIQTNV 621 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 V +G+T+ LGGI+ + + +P G++P G LF + + EL++FITPR+++ Sbjct: 622 LVNNGQTIVLGGIYKQDKNKVINRIPFFGELPVVGILFSNRQITLKNEELLIFITPRIIT 681 Query: 411 S 411 + Sbjct: 682 N 682 >UniRef50_D1RGV5 Type IV pilus assembly protein PilQ n=1 Tax=Legionella longbeachae D-4968 RepID=D1RGV5_LEGLO Length = 701 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 134/421 (31%), Positives = 225/421 (53%), Gaps = 29/421 (6%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 Q ++++L ++ + VLQ LA+ +N+V S V G ++L L ++PW QAL ++K Sbjct: 266 QVFSGRRISLNFQNISIRSVLQLLADFTGINIVASDRVQGNITLRLNNIPWDQALDIILK 325 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + GL RQ GN++ + + N+ +Q Q + Q P+ + I + YA A +LA Sbjct: 326 TQGLAQRQNGNVMVIDTQKSFNDMEEQQLKSQHKIQRLEPVRSELIQINYAKATDLAILI 385 Query: 137 E----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 + LLS KG ++VD RTN + ++D+ + + + + + ++D+PV QV + A IV + + Sbjct: 386 KDRQNSLLSDKGKVSVDTRTNTIWIQDSGSRVDEVRKLIKELDVPVKQVLIEARIVEVTK 445 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTT----------------------LGSDLSVATATT 230 ++LG++W ++ QH G + + L+ A T Sbjct: 446 DFAQDLGIRWGVSKPQHLSGTLAGANQLAQGVAPADVTPFTDRLNLDLVAAPLTKANPAT 505 Query: 231 HVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES 290 + LLDLELSALE + ++I+SPRL+ ++ QPA I G EIPYQ S+ S Sbjct: 506 VGIALAQLGDNILLDLELSALESEGLAELISSPRLITANQQPALIDSGQEIPYQQSTS-S 564 Query: 291 GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQV 350 GAT+V FK+AVL ++V P + +I + L I+Q++ V AI +EI+T V Sbjct: 565 GATAVAFKKAVLSLKVIPQITPDNKILMDLKINQDLALPNQTYNG--VPAIATKEIQTNV 622 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 V +G+T+ LGGI+ + VP G +P G LF++ EL++FITP++++ Sbjct: 623 LVSNGQTIVLGGIYQQDKSKTITRVPFFGQLPVVGNLFKNTQIGVHNDELLIFITPKIIT 682 Query: 411 S 411 + Sbjct: 683 N 683 >UniRef50_C9QNG5 Type IV pilus biogenesis protein PilQ n=3 Tax=Vibrionaceae RepID=C9QNG5_VIBOR Length = 563 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 141/414 (34%), Positives = 240/414 (57%), Gaps = 20/414 (4%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + +K+++ D+PV VLQ +A+ NLVVS VSG ++L L +PW+Q L + Sbjct: 149 PAPEQEAKKISINFQDIPVRHVLQLIADYNDFNLVVSDSVSGNLTLRLDGLPWQQVLDVI 208 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 ++ GL R N++ + A + + + L + + +++A A E+A Sbjct: 209 LQVKGLDKRVMDNVVLIAPQAELDARHREELEKARLEAELGELRSEIVKVKFAKASEIAS 268 Query: 135 AGE-----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 +LS++G+++VD+RTN LL+RD + + +++ ++ +D+PV QV++ A IVT Sbjct: 269 MIGGEGAISMLSSRGALSVDERTNALLIRDLQPNIDVIQELISALDIPVKQVQIEARIVT 328 Query: 190 INEKSLRELGVKWTLADAQHAGGVGQVTTLG-------------SDLSVATATTHVGFNI 236 ++E +L ELGV+W + + +G + + + + + F + Sbjct: 329 VHEGNLDELGVRWGYHNTNGSTSLGSSIEDNVFGAVPIDDMLNVNLAATSVNASSIAFQV 388 Query: 237 GRINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSV 295 ++ LLDLELSAL+++ + ++I+SPRL+ ++ +PA I+QG+EIPY SS SGATSV Sbjct: 389 AKLGSDMLLDLELSALQRESKAEVISSPRLITTNKKPAYIEQGTEIPYLESSS-SGATSV 447 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 FK+AVL ++V P + R+ L L ++Q+ PG +++ GE +AI+ Q I TQV V +G Sbjct: 448 AFKKAVLSLKVVPQITPDNRLVLDLSVTQDRPGDIVKTGTGEAVAINTQRIGTQVLVDNG 507 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ET+ LGGIF D VP+LGD+P G LFR ++ + EL++F+TP++V Sbjct: 508 ETVVLGGIFQHSVTDAVDKVPMLGDLPLLGALFRRTYQKMGKSELLIFVTPKVV 561 >UniRef50_Q3A2N4 Type IV pilus biogenesis protein PilQ n=2 Tax=cellular organisms RepID=Q3A2N4_PELCD Length = 874 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 130/407 (31%), Positives = 203/407 (49%), Gaps = 17/407 (4%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + QK++L+ DD + +LQ + E LN++V DV G ++L L DVPW QAL V++ Sbjct: 472 KEYVGQKISLVFDDADIRNILQLIGEVSDLNIIVGDDVKGNMTLRLIDVPWDQALDLVLE 531 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 L QEGN+L + +A Q A + L I + Y D L +A Sbjct: 532 IRELGKLQEGNVLRILPLAKIRQMQQEQFAAARAKEKLEDLVTDLIPVSYTDVEGLVEAC 591 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 +K LS +G + D R +L++ D + ++ ++Q V +D PV QV + A IV + R Sbjct: 592 KKRLSDRGKVIGDVRDKKLIVTDIPSVVADIKQLVRLLDTPVRQVLIEARIVEASATFSR 651 Query: 197 ELGVKWTLA-----------DAQHAGGVGQVTTLGSDLSVATATTHVGFNIG--RINGRL 243 +LGV W ++ + G G + + ++ G G ++ + Sbjct: 652 DLGVNWGISYQHNPGSDVEGNDASIGMGGTLVGIPVSPGEVSSGIVSGLTFGQVGVDKTV 711 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLG 303 LDL L+ALEQ I+++PR+ + + A + QG+EIPY S + T EFK+A L Sbjct: 712 LDLRLAALEQSGHGRIVSTPRVSTLNGEEAEVAQGTEIPYLSVSDDGTKT--EFKKAELS 769 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 ++VTP + G + L++ + G E AID + T+V VK GET +GGI Sbjct: 770 LKVTPEINPDGSVILEIEAKNDSRGA--NTGLSEAPAIDTKRATTKVLVKDGETTVIGGI 827 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 F + VP L ++P G LF+ +ERREL+VFITPR++ Sbjct: 828 FIQDKSESDSGVPWLMNVPILGHLFKSKSVSEERRELLVFITPRILD 874 >UniRef50_A7H857 Type IV pilus secretin PilQ n=4 Tax=Anaeromyxobacter RepID=A7H857_ANADF Length = 893 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 129/427 (30%), Positives = 213/427 (49%), Gaps = 32/427 (7%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 P + +++TL D+ + +L+ +A+ K N+VV+ DV+G V++ L +VPW QAL Sbjct: 460 APQARGYSGRRITLDFHDIDIRNLLRLIADVSKKNIVVADDVTGKVTVALRNVPWDQALD 519 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 V+KS GL + GN++ + + + +PL+ R I + +A AG++ Sbjct: 520 LVLKSKGLGKEEMGNVIRIARFEAIAKEQQARAEAEKARIPLMPLKVRIIPVNFARAGDV 579 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 + + +LS +GS++ D+RTN L+++D + AL E V +D + QV + + IV + Sbjct: 580 SGRVKDVLSERGSVSTDERTNVLIVKDVQEALVRAEGLVRNLDTEIPQVLIESRIVEASS 639 Query: 193 KSLRELGVKWTLADA-------------------------QHAGGVGQVTTLGSDLSVAT 227 + LGV+W + ++ G L Sbjct: 640 NFNKALGVQWGGNASFTQATGNPTGVAFPNNVAAAGGAGPGNSFGTAANPNYAVSLPAPV 699 Query: 228 A---TTHVGFNIGRINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 +G G G L+L LSALE + I++P++ + A+I QG IP+ Sbjct: 700 GDGQGGALGLVFGSAGGAFNLNLRLSALENNGVVKTISAPKIATIDNREATIGQGISIPF 759 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 S T+ F EA L ++VTP V G I LK+ + N P L A+G+ +I K Sbjct: 760 SQVSASGVNTT--FIEAKLELKVTPHVSADGSILLKIKATNNQPNPQLTGANGQ-PSISK 816 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 +E ET+V VK GET +GGI+TR+ + VP LG +P G FR+ ++D+ EL++F Sbjct: 817 REAETEVLVKDGETTVIGGIYTRQTANRTSEVPFLGKLPLLGYFFRNMSEQDDHTELLIF 876 Query: 404 ITPRLVS 410 ITPR+++ Sbjct: 877 ITPRILN 883 >UniRef50_Q489N5 Type IV pilus biogenesis protein PilQ n=7 Tax=Proteobacteria RepID=Q489N5_COLP3 Length = 706 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 145/422 (34%), Positives = 235/422 (55%), Gaps = 34/422 (8%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 + ++L D+PV VLQ +A+ + NL++S V+G ++L L VPW QAL ++K Sbjct: 286 FTGRSISLSFQDIPVRTVLQIIADYNEFNLIISDTVTGNITLRLDGVPWDQALSIILKVK 345 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE- 137 GL R +GNIL V A+ + + + L + + + YA A E ++ + Sbjct: 346 GLDKRMQGNILMVAPSDELAAREAQSLQAKQQVEELATLYSEYLQINYAKAAEFSELIKN 405 Query: 138 ---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +LS +GS++VD+RTN LL+RD ++ +++ + +D+PV QV + A +VT+ + Sbjct: 406 EDTSILSDRGSVSVDERTNTLLIRDTAKSIEDIKRMITILDVPVRQVVIEARMVTVKDNM 465 Query: 195 LRELGVKWTLADAQHAGGVGQ-------------------------VTTLGSDLSVATAT 229 ELG++W + + L +L VA A Sbjct: 466 NEELGIRWGVTNTDGEFATSGSIEGASSANGTRGVTTPGVGQVPTIGDGLNVNLPVANAA 525 Query: 230 THVGFNIGRI-NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 + F + R+ NG +LDLELSALE++ + ++IASPR+ ++ + A I+QG EIPYQ + Sbjct: 526 GTIAFQVARLANGTILDLELSALEKENKGEVIASPRITTANQKEAYIEQGVEIPYQEA-A 584 Query: 289 ESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 SGAT+ +FK+AVL + VTP + +I L L ++Q+ + G AID Q I T Sbjct: 585 SSGATATQFKKAVLSLTVTPHITPDDKIILDLVVTQDTISDITS---GFAPAIDTQRIGT 641 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 QV V +GET+ LGGI+ + S +P+LGDIP+ G LFR+ + +E++EL++F+TPR+ Sbjct: 642 QVLVNNGETIVLGGIYQQAIISTVSKIPILGDIPYLGWLFRNSSQLNEKKELLIFVTPRI 701 Query: 409 VS 410 V+ Sbjct: 702 VT 703 >UniRef50_P34750 Fimbrial assembly protein pilQ n=17 Tax=Gammaproteobacteria RepID=PILQ_PSEAE Length = 714 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 136/435 (31%), Positives = 222/435 (51%), Gaps = 44/435 (10%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 A +K++L D+ V VLQ +A+ LNLV S V G ++L L +VPW QAL V+K+ Sbjct: 278 AYTGEKLSLNFQDIDVRSVLQLIADFTDLNLVASDTVQGNITLRLQNVPWDQALDLVLKT 337 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL R+ GN+L V ++ Q + PL I + YA A ++AK + Sbjct: 338 KGLDKRKLGNVLLVAPADEIAARERQELEAQKQIAELAPLRRELIQVNYAKAADIAKLFQ 397 Query: 138 KLLSA---------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 + S +GS+TVD RTN ++ + L L + V+Q+D+PV QV + A IV Sbjct: 398 SVTSDGGQEGKEGGRGSITVDDRTNSIIAYQPQERLDELRRIVSQLDIPVRQVMIEARIV 457 Query: 189 TINEKSLRELGVKWTLADAQH-------------------------------AGGVGQVT 217 N + LGV+W A + G + Sbjct: 458 EANVGYDKSLGVRWGGAYHKGNWSGYGKDGNIGIKDEDGMNCGPIAGSCTFPTTGTSKSP 517 Query: 218 TLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 + DL AT+ +G + +LDL+LSA+E+ +I++ P+++ S + A I + Sbjct: 518 SPFVDLGAKDATSGIGIGF-ITDNIILDLQLSAMEKTGNGEIVSQPKVVTSDKETAKILK 576 Query: 278 GSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE 337 GSE+PYQ +S ++ FKEA L +EVTP + RI +++ ++++ P Q Sbjct: 577 GSEVPYQEASSSGATST-SFKEAALSLEVTPQITPDNRIIVEVKVTKDAPDY--QNMLNG 633 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 V I+K E+ ++ V GET+ +GG+F+ + + VP LG++P+ G+LFR D D + Sbjct: 634 VPPINKNEVNAKILVNDGETIVIGGVFSNEQSKSVEKVPFLGELPYLGRLFRRDTVTDRK 693 Query: 398 RELVVFITPRLVSSE 412 EL+VF+TPR+++++ Sbjct: 694 NELLVFLTPRIMNNQ 708 >UniRef50_B8GPV1 Type IV pilus secretin PilQ n=5 Tax=Chromatiales RepID=B8GPV1_THISH Length = 711 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 135/418 (32%), Positives = 226/418 (54%), Gaps = 30/418 (7%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 ++++L D+ V VLQ +A+ LN+VVS V+G ++L L +VPW QAL +++S Sbjct: 293 TYTGERLSLNFQDIEVRSVLQLIADFTDLNVVVSDSVTGNITLRLRNVPWDQALDIILRS 352 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL R+ GN++ V + + + + PL I + YA A ++A Sbjct: 353 KGLGMREAGNVIFVAPTEEIAAREKLEMESRKQVEELAPLRAEFIQVNYARADDVASIIR 412 Query: 138 ----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 LS +GS+TVD RTN LL++D + L+ + + + ++D+PV QV + IV ++ Sbjct: 413 SDRTTFLSDRGSLTVDNRTNTLLVQDTEAKLADIRRLIDRLDIPVQQVLIETRIVIASDD 472 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSV---------------------ATATTHV 232 R+LG ++ + G TT + + + + Sbjct: 473 FARDLGARFGVTGVGQTGRTQTFTTGNLSGTTEMIRGDELSLLNRLNTNLPVISPSAGSI 532 Query: 233 GFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 +I R LLDLE+SAL+ + + +II+SPR++ ++ Q A I+QG IPYQ ++ SGA Sbjct: 533 ALSILR-PDVLLDLEISALQVEGRGEIISSPRVITANGQTARIQQGERIPYQEATS-SGA 590 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 T+V+F EAVL EVTP + G I L + ++++ PG ++ Q +I+ +E+ETQV V Sbjct: 591 TAVQFIEAVLATEVTPQITPNGNIILNIRVNKDNPGTLVVQGT---PSIETREVETQVFV 647 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 ++GET+ LGG++ + + VP GD+P LFR GK + EL++F+TP+++ Sbjct: 648 RNGETVVLGGVYEIDSLETLEKVPFFGDLPGIRHLFRRTGKSTRKAELLIFVTPKVIE 705 >UniRef50_Q9ZFG1 PilQ n=3 Tax=Cystobacterineae RepID=Q9ZFG1_MYXXD Length = 901 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 126/428 (29%), Positives = 209/428 (48%), Gaps = 31/428 (7%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 P + ++V+ D+ + +L+ +AE K N+VV+ DVSG V++ L +VPW QAL Sbjct: 471 APQQARYRGKRVSFEFKDIDIQNLLRVIAEISKKNIVVADDVSGKVTIRLRNVPWDQALD 530 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 V+++ L + GNI+ + + ++ + Q L + + YA A ++ Sbjct: 531 LVLRTKALGKEEFGNIIRIAPLKTLEEEARLRQERKKSLQQQEDLMVNLLPVNYAVAADM 590 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 A + +LS +GS+TVD+RTN L+++D ++ V +D QV + + IV N Sbjct: 591 AARVKDVLSERGSVTVDQRTNVLIVKDVRSNTERARSLVRSLDTQTPQVLIESRIVEANT 650 Query: 193 KSLRELGVKWTLADAQHAGGVGQVT------------------------TLGSDLSVATA 228 R LGV+W +L T Sbjct: 651 SFSRSLGVQWGGQARAGQATGNSTGLIFPNNLAVTGGVTGTGAGLPDNPNFAVNLPTGTG 710 Query: 229 ---TTHVGFNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ 284 +GF G G L L+L LSA E + + I++P++ A I QG IP+ Sbjct: 711 QGVGGAMGFTFGSAGGALQLNLRLSAAENEGSVKTISAPKVTTLDNNTARINQGVSIPFS 770 Query: 285 VSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 +S + T+ F EA L +EVTP + Q G + + ++ S N P A+G+ +I ++ Sbjct: 771 QTSAQGVNTT--FVEARLSLEVTPHITQDGSVLMSINASNNQPDPSSTGANGQ-PSIQRK 827 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 E TQV VK G+T +GGI+ R+ + +SVP L IP G LF+++ + D R+EL++FI Sbjct: 828 EANTQVLVKDGDTTVIGGIYVRRGATQVNSVPFLSRIPVLGLLFKNNSETDTRQELLIFI 887 Query: 405 TPRLVSSE 412 TPR+++ + Sbjct: 888 TPRILNRQ 895 >UniRef50_A2S716 Type II/III secretion system protein n=57 Tax=Burkholderia RepID=A2S716_BURM9 Length = 616 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 131/409 (32%), Positives = 211/409 (51%), Gaps = 19/409 (4%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 G + + +++ + +A V A A LN+VVS V GTVSL L +V W+ A + Sbjct: 210 GDPSGDNRPISINLQQASLAAVFDAFARFTGLNIVVSERVRGTVSLRLNNVRWRSAFDAL 269 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 + + GL + G+++ V +A ++ ARA PL +R L+YA A ++ + Sbjct: 270 LDAHGLAMARRGSVIWVAPVAELAERERQRFDAHARAAQLEPLASRGFVLRYARAADVQR 329 Query: 135 AG-----EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 +++LS +GS+ D RTN L + D L+ + + ++D P QV + A IV Sbjct: 330 LLAGSAGQRILSKRGSVLADPRTNLLFVTDLSGRLAQIADLIGKLDTPSRQVLIEARIVE 389 Query: 190 INEKSLRELGVKWTLADAQHAG-GVGQVTTLGSDLSVATATTHVGFNIGRIN-------- 240 + R LG + L G V L+ A GF+ Sbjct: 390 GDRGFSRNLGARLALRAPDAGERATGIVAGRNGTLAELAARPISGFDAATAGLTLFAARA 449 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 RLLD+ELSALE + + I++SPR++ + A ++QG+E+PYQ G +G + V+F+ A Sbjct: 450 SRLLDVELSALEAEGRGQIVSSPRVVTADRTKAVVEQGAELPYQAKVG-NGVSGVQFRRA 508 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 L +EV P + GR+ L L ++++ G+ AI + ++T+VEV++G T+++ Sbjct: 509 TLKLEVEPQITPDGRVILDLDVAKDSVGEETASG----PAIHTKHVQTRVEVENGGTVSI 564 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 GGIF ++ VPLLG IP G LFRH + +R ELVV+ITP +V Sbjct: 565 GGIFESDDRDDVTRVPLLGKIPVLGALFRHRAQRAQRSELVVYITPTVV 613 >UniRef50_C0DV38 Putative uncharacterized protein n=2 Tax=Neisseriaceae RepID=C0DV38_EIKCO Length = 707 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 138/420 (32%), Positives = 217/420 (51%), Gaps = 29/420 (6%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 ++V+L DV V +LQ LA++ +N+V S VSG ++L L DVPW QAL V++S Sbjct: 285 FTGKRVSLDFQDVDVRTILQILAKESNMNIVASDSVSGKMTLSLKDVPWDQALDLVMQSR 344 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE- 137 GL +R+ GNI+ V R + PL +R+ L+Y D E K Sbjct: 345 GLESRRNGNIIRVAPAEEFRKIDVETLENAKRIEELGPLVSRTFQLKYKDVNEFRKILNI 404 Query: 138 --------------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 LLS++GS +D TN L+++DN+ + E+ + Q+D+P QV + Sbjct: 405 SDTGSSGGSGNNNNTLLSSRGSAVIDPATNTLIIKDNQNVIKEFERLIEQLDVPARQVMI 464 Query: 184 SAHIVTINEKSLRELGVKWTLADAQH----AGGVGQVTTLGSDLSVATATTHVGFNIGR- 238 A IV N+ R LGVK+ G+G G+ S+A + Sbjct: 465 EARIVEANDGFSRALGVKFGYNKTSGSTRIGSGLGSGGANGNTFSIAPNVNLPAISATSS 524 Query: 239 ------INGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 ++ L LEL+A++++ + II+SPR+L + A+IK G EIPYQ +S Sbjct: 525 ITIVRALSSGALGLELTAMQEQNRGKIISSPRVLTQDRKEATIKAGREIPYQEASSSGAT 584 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 ++ FKEAVLG+ VTP + G + + + ++++ + I+ +E+ T+ V Sbjct: 585 ST-SFKEAVLGLTVTPQITPDGNVIMDIKLNKDSVDENCSVLG--TPCINTKELVTRAMV 641 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + G T+ LGGI+ +N + Q VPLLGDIP G LFR + + + EL++FITPR++ SE Sbjct: 642 EDGGTIILGGIYEEENSNSQYKVPLLGDIPVVGNLFRGTRRNNSKNELLIFITPRIMGSE 701 >UniRef50_B7VLJ8 Type IV pilus assembly protein PilQ n=9 Tax=Gammaproteobacteria RepID=B7VLJ8_VIBSL Length = 572 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 151/419 (36%), Positives = 241/419 (57%), Gaps = 30/419 (7%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + + +++ D+PV VLQ +A+ NLVVS V+G ++L L VPW+Q L +++ G Sbjct: 153 EGKVISINFQDIPVRNVLQLIADYNDFNLVVSDSVTGNLTLRLDGVPWQQVLDIILQVKG 212 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE-- 137 L R +GN++ V A + + + + L++ I + +A A ++A Sbjct: 213 LDKRVDGNVILVAPKAELDLREQQALEKSRLEEELGELKSEIIKINFAKATDIADMIGGE 272 Query: 138 ---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +LS +GS+T+D+RTN LL+R+ + ++ + + +D+PV QV++ A IVT+ E + Sbjct: 273 GAVSMLSERGSITIDERTNSLLIRELEENIAVIRGIIESLDIPVKQVQIEARIVTVTEGN 332 Query: 195 LRELGVKWTLADAQHAGGVGQVTTLGSD-----------------------LSVATATTH 231 L ELGV+W ++ + VG + + + + Sbjct: 333 LDELGVRWGVSSTNGSFKVGGSIEGNHPSQITPYDDNGGNSAIDDFLNVNLGATSPSASS 392 Query: 232 VGFNIGRINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES 290 + F + ++ LLDLELSAL+Q+ + +II+SPRL+ ++ +PA I+QG+EIPY SS S Sbjct: 393 IAFQVAKLGSDTLLDLELSALQQESKAEIISSPRLITTNKKPAYIEQGTEIPYLESSS-S 451 Query: 291 GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQV 350 GATSV FK+AVL ++VTP + R+ L L ++Q+ PGQV++ GE +AID Q I TQV Sbjct: 452 GATSVAFKKAVLSLKVTPQITPDNRLVLDLSVTQDRPGQVVKTGTGEAVAIDTQRIGTQV 511 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V +GET+ LGGIF S D VPLLGD+P G LFR + + EL++F+TP++V Sbjct: 512 LVNNGETVVLGGIFQHSVSSQVDKVPLLGDLPVLGALFRRSYENVGKSELLIFVTPKVV 570 >UniRef50_C7HZW7 Type IV pilus secretin PilQ n=1 Tax=Thiomonas intermedia K12 RepID=C7HZW7_THIIN Length = 752 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 139/464 (29%), Positives = 226/464 (48%), Gaps = 78/464 (16%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 QK++L ++ V +LQ A+ LN+VVS V+G ++L L DVPW QALQ ++++ GL Sbjct: 289 GQKLSLNFQNIDVRSLLQVFADFTHLNVVVSDSVTGNLTLRLKDVPWDQALQVILRAKGL 348 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK-- 138 R+EGN+L + + A P+++ + L Y A + Sbjct: 349 GERKEGNVLWIAPRDEILAREKADLEAKKSLSALEPVKSETFQLNYQKAATVVAMLTGAA 408 Query: 139 ----------------------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQW 170 +LS +G++ D RTN++ + D + L + Q Sbjct: 409 GGAQSGTTATPSPVLLPGLSSSAAPTSRILSPRGTVLADPRTNQIFVTDIPSKLEEVAQL 468 Query: 171 VAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL----------- 219 +A++D PV QV + A IV +++ R LGVK DA+ G T L Sbjct: 469 IAKIDKPVRQVMIEARIVEASDQFGRSLGVKLGFLDARGIQGGVPGTNLVGGTYGTVSGD 528 Query: 220 -------------------------------GSDLSVATATTHVGFNIGRINGRLL-DLE 247 L A + +G ++ +LE Sbjct: 529 YLGVANQTNQPGSSAATLADSQFVNLPAFGLAGSLLAGAAPSSLGISLFNAAANRFINLE 588 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 LSA+E + II+SPR++ + L A+I+QG+EIPYQ ++ SGAT+V FK+AVL ++VT Sbjct: 589 LSAMEADGKGKIISSPRVITADLSKATIEQGTEIPYQQATS-SGATAVTFKKAVLSLDVT 647 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 P + G + + + I ++ PG V +I+ + TQV+V++G T+ LGGI+T + Sbjct: 648 PQITPDGNVIMNVEIHKDSPGASTA----GVPSINTNTVTTQVQVENGGTVVLGGIYTSQ 703 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 ++ D VPLLGDIP G LF+++ K + EL+VF+TP++V++ Sbjct: 704 EQNQTDKVPLLGDIPVLGNLFKNNSKMYNKNELMVFLTPKIVTN 747 >UniRef50_A6GHB7 Type IV pilus secretin PilQ n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHB7_9DELT Length = 1125 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 119/427 (27%), Positives = 204/427 (47%), Gaps = 39/427 (9%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + + + + + D P+ VL ++ ++N++ P+V GTV++ L+ VPW QAL +++S Sbjct: 695 RGEPIDIELQDAPIKDVLLLFSDIGRVNIIAGPEVQGTVTMKLSAVPWDQALDIILRSLN 754 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 L QEGN++ V + A + + E PLE R I+L YAD G++ + + Sbjct: 755 LGMVQEGNVIRVATQATLEDERRKAIEEANARVQLKPLETRLISLSYADVGDMLPKVQSV 814 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 LS++G++T D RTN L++ D ++ E V Q+D QV + A IV LR+LG Sbjct: 815 LSSRGTVTPDTRTNTLIVMDVAENIALAESLVRQLDSQTPQVLIEARIVEARTNWLRQLG 874 Query: 200 VKWTLADAQHAGGVGQVTTLGSDLS----------------------------------- 224 ++W G L + Sbjct: 875 IQWGFDFVASPGTGNPTGLLFPNAIGIGGGSGSNQSPVNGLILPGAAANPNYAVDLPAVV 934 Query: 225 VATATTHVGFNIGRINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 + +GF+ G ++G +L LSA E + + II++P+++ A I+QG +IP Sbjct: 935 GTGSGGALGFSFGSLSGNLNTNLRLSAAENEGDVRIISAPKIVTLDNTEAQIEQGVQIPI 994 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 S + T + A LG+ VTP V +G + L++ + +N V A G+ I Sbjct: 995 AQVSAQGVNT--RYVNATLGLRVTPQVTNEGAVLLEVEVQKNEADFVNTGARGD-PTILT 1051 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 + +Q+ + G+T +GGI+TR VP DIP G F++ + D+R E+++F Sbjct: 1052 KSARSQLLITDGDTAVIGGIYTRNQAINHSKVPWFADIPIIGWFFKNRTERDDRSEMLIF 1111 Query: 404 ITPRLVS 410 +TPR+V+ Sbjct: 1112 LTPRIVN 1118 >UniRef50_Q0A4Y8 Type IV pilus secretin PilQ n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A4Y8_ALHEH Length = 694 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 143/411 (34%), Positives = 223/411 (54%), Gaps = 23/411 (5%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 +TL DV V +VLQ LA+ +N V+S V G ++L L +VPW AL+ ++++ Sbjct: 279 TYTGDPITLDFQDVEVRRVLQILADFNDMNAVISDSVDGRLTLRLVEVPWDHALEIILEA 338 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL R+ GN+L+ +E + PL + I + YA A ++A + Sbjct: 339 QGLDVRERGNVLTFAPTEELAARDRAREEARRTVDEVAPLSSAFIQVNYARAEDIANLLK 398 Query: 138 ----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 LLS +G + +D+RTN L+++D + + + V ++D+PV QV + + IV ++ Sbjct: 399 GDETSLLSERGQVAIDERTNLLIVQDMERNIDDIRNLVNRLDIPVQQVLIESRIVIADDD 458 Query: 194 SLRELGVKWTLADAQHAGGVG--------------QVTTLGSDLSVATATTHVGFNIGRI 239 R+LGV++ G G L DL +G IGRI Sbjct: 459 FSRDLGVRFGYTATGSLGSEGTAIGARPTPTPGIDGTDDLMVDLPAPAEAPRLGLAIGRI 518 Query: 240 NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKE 299 RLL LELSA+E + + ++I+SPR++ ++ + A+I+QG EIPYQ + SGAT+VEFKE Sbjct: 519 GDRLLQLELSAMETEGRGEVISSPRVITANQREANIRQGVEIPYQEETA-SGATNVEFKE 577 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 AVLG+ VTP + R+ + L +S + G+V V +ID Q + TQV V +GET+ Sbjct: 578 AVLGLTVTPQITPDDRVIMNLEVSNDTVGEVFA----GVPSIDTQSVTTQVLVDNGETVV 633 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 LGG++ R + VP G +P G LFR+ DE+ EL+VF+TPR++ Sbjct: 634 LGGVYERASGEQTRRVPFFGSLPGVGWLFRNRLTFDEQSELLVFVTPRILD 684 >UniRef50_Q0VMB7 Fimbrial assembly protein pilQ n=3 Tax=Gammaproteobacteria RepID=Q0VMB7_ALCBS Length = 723 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 137/453 (30%), Positives = 214/453 (47%), Gaps = 67/453 (14%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L D+ V VLQ +A+ LNLV S V G ++L L +VPW QAL+ ++K+ Sbjct: 273 YTGEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVDGRITLRLQNVPWDQALELILKTK 332 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-- 136 GL RQ GN+L V + Q + +A PL I + YA+A EL + Sbjct: 333 GLDKRQVGNVLLVAPADEIAAREQLELESQKKIEALAPLRTEYININYANASELKELISN 392 Query: 137 -----EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 E L+S +GS+ VD+RTN L+++D + L + + + Q+D+PV QV + A +V Sbjct: 393 AGGKGEALVSGRGSVVVDQRTNTLIVQDTQAKLQEIRELIDQLDIPVQQVLIEARVVVAT 452 Query: 192 EKSLRELGVKWTLAD-------------------------------------AQHAGGVG 214 E GV+W G G Sbjct: 453 NDVTDEFGVRWGGLGFDTESMLEDGRTFGVSGRLQSLRNLHQTNIDATIAYPDTVGGHPG 512 Query: 215 QVTTLGSDLSV----------------ATATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 V D + + + + L++LELSALE + + Sbjct: 513 DVEFGPDDFQFQEAENDDDLIVDLGVDSASASRFAVGFTSLASGLIELELSALEAEGHGE 572 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRL 318 ++A+P++L + QPA I G ++P+++++ SGATS++F EA L +EVTP + G I + Sbjct: 573 LVATPKVLTADQQPAVIASGQQVPFEIATS-SGATSIDFVEAELRLEVTPHITPDGNIIM 631 Query: 319 KLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLL 378 L ++ + A I+ +ET V V GET+ LGGIF ++ + P L Sbjct: 632 MLKVNNDSFSSDGSAA------INTNRVETSVLVNDGETVVLGGIFQQEKINSVTKTPFL 685 Query: 379 GDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 GD+PW G LFR D ++EL++FITPRL+ Sbjct: 686 GDLPWIGALFRKTVNRDNKQELLIFITPRLMKD 718 >UniRef50_B5JTT2 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTT2_9GAMM Length = 721 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 130/435 (29%), Positives = 228/435 (52%), Gaps = 43/435 (9%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 ++++L D+ V VLQ +A+ LN+VVS VSG+++L L +VPW QAL+ ++K+ Sbjct: 283 FTGERLSLNFQDIEVRSVLQLIADFTGLNVVVSDSVSGSLTLRLKNVPWDQALEIILKTK 342 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 GL R+ GN+L + + + Q PL++ + +A A ++ + Sbjct: 343 GLDKRKSGNVLLIAPAEEIAQQEKLALEAKQQVQELAPLQSEFFEVNFAKAEQILNLIKG 402 Query: 139 -----------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQV 181 LLS +G+ TVD RTN L++ D + + + ++D+PV QV Sbjct: 403 KSEDGEGQSEGDSKSSGLLSERGTATVDARTNTLMVTDTAVVMEQIRSMLQRLDIPVKQV 462 Query: 182 ELSAHIVTINEKSLRELGVKWTL-------------------------ADAQHAGGVGQV 216 + + IV ++ ++LG ++ + + Sbjct: 463 LIESRIVIASDDFDKQLGSRFGVNRIDPLPVGEGAVFGGSDTFNLQGRQSGGDLNINSRP 522 Query: 217 TTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK 276 + ++T F + +G LL+LELSAL+ + + +II++PR++ ++ + A I+ Sbjct: 523 MNFNFPANAGSSTGQFAFALPTSSGNLLELELSALQAEGKGEIISTPRVITANQKEAFIE 582 Query: 277 QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG 336 QG EIPY + SGA +V FK+AVL + TP + RI L L++ ++ G++ + + Sbjct: 583 QGVEIPYLEA-ASSGAVTVAFKKAVLSLTATPQITPDDRIILDLNVKKDNVGEIFGEGEI 641 Query: 337 EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDE 396 +V +ID +E+ETQV VK+GET+ LGGIF + +P LGDIP G+LFR + K++ Sbjct: 642 QVPSIDTREVETQVLVKNGETVVLGGIFEHETLDSVTKIPFLGDIPGIGRLFRREIKQNS 701 Query: 397 RRELVVFITPRLVSS 411 +RE+++F+TP++V Sbjct: 702 KREILIFVTPKIVRD 716 >UniRef50_C6P2K0 Type IV pilus secretin PilQ n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2K0_9PROT Length = 688 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 134/407 (32%), Positives = 210/407 (51%), Gaps = 20/407 (4%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K+TL ++ + L +A+ LN+V+S VSG ++L L DVPW QAL +++S Sbjct: 281 YAGEKLTLNFQNISTREALSVIADFTGLNMVISDTVSGNLTLRLKDVPWDQALDIILQSK 340 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE- 137 GL R+ GN++ V + A + PL S L YA A ++A + Sbjct: 341 GLDMRKNGNVIQVAPREEIASKEKLDFASRQEIGDLEPLRTESFQLSYAKALDIANLLKN 400 Query: 138 ---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 LLS +GS D RTN L ++D T L + +V Q+D+PV QV + A V E Sbjct: 401 KDTGLLSKRGSSVSDLRTNTLFVQDTPTRLEEVRTFVKQLDVPVRQVMIEARFVEAGETF 460 Query: 195 LRELGVKWTLADAQHA----------GGVGQVTTLGSDLSVATATTHVGFNIGRINGR-L 243 + LG + + G ++T + T + N+ + Sbjct: 461 NQTLGGRLSYTGPGSTVAGGGFAGPAGNRAALSTTSLLPGAGSVTGGMTLNLFNAAATKV 520 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLG 303 L LEL+A E IASPR++ PA+I+ G E+PY ++ SGATSV FK+AVLG Sbjct: 521 LTLELNASELDGTTKNIASPRVVTGDKTPATIESGVEVPYLQATS-SGATSVAFKKAVLG 579 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 + VTP + + +KL +SQ+ G + V +I+ ++++TQV V +G T+ +GG+ Sbjct: 580 LTVTPQITPDDHVGMKLSVSQDTVGNIYS----GVPSINTKKVDTQVLVDNGGTVVIGGV 635 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +T+ ++ +PLLGDIP G LF+ D ++EL+VFITP++V Sbjct: 636 YTQDATDSKEQIPLLGDIPILGWLFKTDTIVKAKKELLVFITPKIVK 682 >UniRef50_B5EP42 Type IV pilus secretin PilQ n=3 Tax=Acidithiobacillus RepID=B5EP42_ACIF5 Length = 784 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 134/475 (28%), Positives = 220/475 (46%), Gaps = 82/475 (17%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 ++++ ++ V LQ +A+ N+VVS +V+G++S+ L + PW+QA Q +++ Sbjct: 297 NPNAGARLSMDFQNISVRDALQVIADFTHQNIVVSNNVTGSLSIRLKNEPWEQAFQVILQ 356 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 S GL + GNIL V + + Q A + PLE I ++YA A E+A Sbjct: 357 SQGLAVKHIGNILWVAPASQITSQEEAQLKADASKRKLEPLETELIRIRYAKASEIASLL 416 Query: 137 E---------------------------------------KLLSAKGSMTVDKRTNRLLL 157 + LL +GS+ V RTN LL+ Sbjct: 417 QGFDQNKEPGGGETGNEMNPAQNAALASALGIPNSSLIGNSLLGPRGSVAVVTRTNSLLV 476 Query: 158 RDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT----------LADA 207 RD ++ ++ +A++D PV QV + A IV + + + LGV W + + Sbjct: 477 RDTPQDIANIKHLIAKIDRPVPQVLIEARIVQVTTSAAQSLGVNWGGTYTSGGGGGIVNL 536 Query: 208 QHAGGVGQVTTLGSDLS-----------------------------VATATTHVGFNIGR 238 G G +T G + +GF +G Sbjct: 537 SGTGATGVTSTQGGAYPMSGTTTTTGTGFTTPALVNLVPSTAGTALASMNPASLGFALGT 596 Query: 239 INGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 297 G +L+L+L AL+ + II+SP++L + A I+QG EIPYQ ++ SGAT+V F Sbjct: 597 AAGNRILNLQLQALQADNRAKIISSPKVLTQDNEKAVIEQGQEIPYQQATS-SGATAVSF 655 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 K+AVL ++VTP + G+I L + + P G + I+ Q+++T++ V +G+T Sbjct: 656 KKAVLSLDVTPHISPNGKITLDVDARNDQPNYAQAMPSG--IPINTQQVKTKLLVNNGQT 713 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + +GGI+T + VPLL DIP G LF+ + EL+VF+TP++V E Sbjct: 714 VVIGGIYTDSTTQNETGVPLLRDIPLLGWLFKSHINSVAKTELLVFLTPKVVGGE 768 >UniRef50_Q5FAD2 Type IV pilus biogenesis and competence protein pilQ n=31 Tax=Bacteria RepID=PILQ_NEIG1 Length = 723 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 132/426 (30%), Positives = 220/426 (51%), Gaps = 31/426 (7%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + +K++L DV + +LQ LA++ +N+V S VSG ++L L DVPW QAL V Sbjct: 293 APKTFTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVSGKMTLSLKDVPWDQALDLV 352 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +++ L RQ+GNI+++ + L +++ L+Y + E Sbjct: 353 MQARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRS 412 Query: 135 AGE-----------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 L+S +GS+ +D TN L++ D ++ + + + ++D+P QV + Sbjct: 413 ILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQVMI 472 Query: 184 SAHIVTINEKSLRELGVKWTLA------DAQHAGGVGQVTTLGS----------DLSVAT 227 A IV + R+LGVK+ + A G G + G +L VA Sbjct: 473 EARIVEAADGFSRDLGVKFGATGRKKLKNETSAFGWGVNSGFGGGDKWEAQTKINLPVAA 532 Query: 228 ATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS 287 A + + I+ L+LELSA E + +A+PR+L + + A I+ G EIP+ V++ Sbjct: 533 AANSISL-VRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTVTT 591 Query: 288 GESG--ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQE 345 G +T+ E K+AVLG+ VTP + G+I + + I+++ P Q + +L I + Sbjct: 592 ASGGGNSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCAS-GNNTILCISTKS 650 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 + TQ V++G TL +GGI+ N + VPLLGDIP G LF+ GK+ +RREL++FIT Sbjct: 651 LNTQAMVENGGTLIVGGIYEENNGNTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFIT 710 Query: 406 PRLVSS 411 PR++ + Sbjct: 711 PRIIDT 716 >UniRef50_C5S7T3 Type IV pilus secretin PilQ n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7T3_CHRVI Length = 787 Score = 364 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 139/481 (28%), Positives = 228/481 (47%), Gaps = 90/481 (18%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 ++++L D+ V VLQ LA+ LNLV S V G ++L L +VPW QAL ++K+ Sbjct: 306 YDGERLSLNFQDIEVRAVLQVLADFTDLNLVASDTVGGNITLRLKNVPWDQALDIILKTK 365 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-- 136 GL RQ GN+L V + + + PL I + YA A ++A Sbjct: 366 GLAMRQNGNVLMVAPAQELAAQEQLEMESMQKIEELAPLRTEFIQVNYAKAADIAAVLSG 425 Query: 137 -----------------------------------------EKLLSAKGSMTVDKRTNRL 155 +LS +GS+T D+RTN L Sbjct: 426 AGRAASNPASPDARQTGTATRRDQVGASGLAQVAAAAGVSDRGILSPRGSLTFDERTNTL 485 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQH------ 209 +++D TAL + + V +D+ V QV + + +V N R+LGV++ ++ + Sbjct: 486 IVQDTLTALEEVRRVVNLLDVAVRQVMIESRVVIANNSFARDLGVRFGVSGSMGKVGDNE 545 Query: 210 --------------------------------------AGGVGQVTTLGSDLSVATATTH 231 AG +T L + A+ Sbjct: 546 VLIGGGQNGYLAVGDYDSGPFGLNASTGTPYNSTLTDDAGNATLITNLPATTIQDAASGS 605 Query: 232 VGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 + F IG++ L+ LELSA++++ + +II+SPR++ + A+IK GSEIPYQ SG+ G Sbjct: 606 IDFLIGKVGSYLIQLELSAMQREGRGEIISSPRVITADKNKATIKVGSEIPYQEQSGQ-G 664 Query: 292 ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 TS+ FKEAVL ++VTP + RI + L + ++ P ID + ++T V Sbjct: 665 NTSIAFKEAVLQLDVTPQITPDDRIIMDLEVRKDRPDWSRSI--NNTPPIDTRSVKTNVV 722 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + +GET+ LGG+F R+ ++ VP LGD+P G+LF+ + ++D EL++F+TP+++ S Sbjct: 723 IDNGETVVLGGVFEREKTFSKEQVPWLGDVPVLGRLFKQEARQDSNTELLIFVTPKILKS 782 Query: 412 E 412 + Sbjct: 783 D 783 >UniRef50_B1Y305 Type IV pilus secretin PilQ n=13 Tax=cellular organisms RepID=B1Y305_LEPCP Length = 726 Score = 364 bits (935), Expect = 4e-99, Method: Composition-based stats. Identities = 129/447 (28%), Positives = 214/447 (47%), Gaps = 58/447 (12%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 K++L + V +LQ +A+ N+V S V+G V+L L DVPW QAL ++++ Sbjct: 277 FTGDKLSLNFQSIEVRSLLQVIADFTNFNIVTSDSVTGNVTLRLKDVPWDQALDIIMQAK 336 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 L ++ GN+L + ++ + + PL +S L Y A E+ K+ Sbjct: 337 SLGVKKAGNVLWIAPKDELAAKEKQELEARKQIADLEPLRTQSFQLNYTKAEEVVKSLTG 396 Query: 139 ----------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE 182 +LS +GS + RTN+L + D + L + Q +A++D+PV QV Sbjct: 397 QQQGSAGTGQGGNVTRILSQRGSAAYESRTNQLFVSDLPSKLEEVAQMIAKIDVPVRQVM 456 Query: 183 LSAHIVTINEKSLRELGVKWTLADAQHAGG------------------------------ 212 + A IV + R LGVK D + G Sbjct: 457 IEARIVEAEDSFGRTLGVKLGATDLRGINGGVPGWGGNNTRIALGGNYSSIGDTTLQQAT 516 Query: 213 --------VGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPR 264 + S L ATA T G + R L+LELSALE + + +++SPR Sbjct: 517 GSIYANSQFVNLPANTSSLGGATAATFALSLFGASSNRFLNLELSALEAEGKGKLVSSPR 576 Query: 265 LLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQ 324 ++ + A I+QG+E+PYQ + A S+ F++A L +EVTP + +G I + + +++ Sbjct: 577 VVTADQVKALIEQGTELPYQTGGNQQTAPSIAFRKATLKLEVTPQITPEGNIIMDVDVNK 636 Query: 325 NVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWF 384 + GQ AI+ + ++TQV V++G T+ +GGIF + VP+LGDIP+ Sbjct: 637 DSVGQQTLAG----FAINTKHVKTQVLVENGGTVVIGGIFETTETESVNKVPVLGDIPFL 692 Query: 385 GQLFRHDGKEDERRELVVFITPRLVSS 411 G LFR+ + + EL+VF+TP++++ Sbjct: 693 GVLFRNKTRVANKTELLVFLTPKVITD 719 >UniRef50_D0LHN1 Type IV pilus secretin PilQ n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHN1_HALO1 Length = 1269 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 129/418 (30%), Positives = 198/418 (47%), Gaps = 31/418 (7%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 + K+ L + +V + V++ LA+ +N+VV +VS V++ L VPW QAL+ ++ S Sbjct: 846 YRGTKIDLDLQNVDIHNVMRLLADVGGINIVVPDEVSAEVTVRLRQVPWDQALEVILASK 905 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 GL R+EGN+ + + + + A E + TL YA A +L E Sbjct: 906 GLWYRREGNLYRIATRKQLDAEAEAEAERIAALIKAEAPEPQIFTLNYAVASQLKPQLEA 965 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 LLS KG + +D+RTN L++ D + + + + ++D Q+++ A IV RE Sbjct: 966 LLSPKGRIEIDERTNSLIINDVRAHRTRIIDLLTRLDTQTPQIQIEARIVEARSTFAREF 1025 Query: 199 GVKWTLADAQHAGGV----------GQVTTLGSDLSVATATTHVGFNI------------ 236 GV+W + G+ G + VA A+ N+ Sbjct: 1026 GVQWGGSLLDANTGLVFPGNYGVVGGNTDSQTVGTGVAAASPDFAVNLPAATGTGAGGAL 1085 Query: 237 -----GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 G L L LSALE + II++P++ + A I QG IP V S Sbjct: 1086 GFAFGSVGGGLNLTLRLSALEDTGTVRIISAPKITVLNNVEAEISQGVSIPISVISANGV 1145 Query: 292 ATSVEFKEAVLGMEVTPTVLQKG-RIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQV 350 T +F +A L +EVTP V Q+ I + L I +N V A G+ I ++E T V Sbjct: 1146 QT--QFVQADLSLEVTPHVSQRDCSIAMDLQIQKNEADFVNTGARGD-PTILRKEASTTV 1202 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 V ET +GGI+TR + VP LGD+P G LF++ + DER E++VFITPR+ Sbjct: 1203 LVADNETTVIGGIYTRNSGLSYSKVPFLGDLPLLGWLFKNRRENDERTEVLVFITPRI 1260 >UniRef50_A1VK17 Type IV pilus secretin PilQ n=14 Tax=Burkholderiales RepID=A1VK17_POLNA Length = 712 Score = 364 bits (934), Expect = 5e-99, Method: Composition-based stats. Identities = 131/425 (30%), Positives = 225/425 (52%), Gaps = 37/425 (8%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L ++ + +LQ +A+ N+V S V+G+V+L L DVPW QAL ++++ Sbjct: 288 FNGEKLSLNFQNIEIRSLLQVIADFTNFNVVTSDTVTGSVTLRLKDVPWDQALDIILQAK 347 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE- 137 GL R+ GN+L + ++ + Q + +S + YA A E+A Sbjct: 348 GLGMRKTGNVLLIAPKDELAAKDKQELEARVAIQNLEAVRTQSFQINYAKASEIAVQISA 407 Query: 138 --------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 ++LS +GS+ + RTN+L + D + L ++ ++A++D+ V QV + A IV Sbjct: 408 GGTGATTARILSNRGSVIAEPRTNQLFVTDIPSRLEQVQNFIAKLDIAVRQVLIEARIVE 467 Query: 190 INEKSLRELGVKW----------------------TLADAQHAGGVGQVTTLGSDLSVAT 227 ++ R LGV+ V+ S L VA Sbjct: 468 ASDTFGRSLGVRLGGGTIGAAGALTRGNTNVSLGTNYGATVADTSGNFVSFPASTLGVAN 527 Query: 228 ATTHVGFNIGRIN-GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 A + +I + R L+LELSALE + I++SPR++ + A I+QG+E PYQ + Sbjct: 528 AASSFAVSIFNASANRFLNLELSALEADGKGKIVSSPRVVTADQTKALIEQGTEFPYQTA 587 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 + SGATS+ F++A L +EVTP + +G I L L ++++ G+ +AID + I Sbjct: 588 TS-SGATSLAFRKANLKLEVTPQITPEGNIILDLDVNKDSRGETTAAG----IAIDTKHI 642 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 +TQV V++G T+ +GGIFT + + + VPLLGD+P+ G LF+ + ++E++VFITP Sbjct: 643 QTQVLVENGGTVVIGGIFTLEETNNEVKVPLLGDVPYLGNLFKSRERTSRKQEMLVFITP 702 Query: 407 RLVSS 411 ++++ Sbjct: 703 KMITD 707 >UniRef50_B2I8B2 Type IV pilus secretin PilQ n=7 Tax=Xylella fastidiosa RepID=B2I8B2_XYLF2 Length = 636 Score = 363 bits (932), Expect = 7e-99, Method: Composition-based stats. Identities = 124/438 (28%), Positives = 214/438 (48%), Gaps = 42/438 (9%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 Q + VT DVPV VLQ +A++ LN+V S V G V+L L +VPW QAL V Sbjct: 190 SAQGYSGRPVTFNFQDVPVRTVLQLIADESNLNIVASDTVQGNVTLRLINVPWDQALDIV 249 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +++ GL R++ ++ V +E + + L + + Y A + K Sbjct: 250 LRAKGLDKRRDEKVIWVAPQQELAKYEQEKEDARIAIENREGLITDYVQINYHSATVIFK 309 Query: 135 AGEK-------------------LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 A + LS +G + D+RTN L++ D ++ + + +D Sbjct: 310 ALTEAKGMGGGGNGTPNNNSDDAFLSPRGRLVADERTNTLMISDIPKKVAQMRTLIQHID 369 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLA------------DAQHAGGVGQVTTLGSDL 223 PV QV + IV + R+LG K+ + + G T G ++ Sbjct: 370 RPVDQVLIEGRIVIATDSFARDLGAKFGVGAASRFSDNTATIGSNVTAGSSTSATRGLNV 429 Query: 224 SVATATTHVGFNIGRINGR------LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 + T + + LDLELSAL+Q+ + ++I++PR++ ++ + IKQ Sbjct: 430 DLGGPTNTTASVLPSLAYTLLGPKFNLDLELSALQQESRGEVISNPRIVTANQREGYIKQ 489 Query: 278 GSEIPYQVSSGE----SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQ 333 G EI Y +G +V+FKEAVL + VTPT+ R+ L + + ++ Q++ Sbjct: 490 GKEIGYVTITGGVAGGQATPNVQFKEAVLELRVTPTITNDNRVFLNMTVKKDEIDQMITI 549 Query: 334 AD-GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 A+ G V ++K+EI T V V G+T+ +GG++ +++ VP LGD+P+ G LF+ G Sbjct: 550 ANFGTVPTLNKREINTAVLVDDGQTVVIGGVYEFSDRNSVSKVPFLGDVPFLGNLFKKRG 609 Query: 393 KEDERRELVVFITPRLVS 410 K+ ++ EL++F+TP+++ Sbjct: 610 KDKQKAELLIFVTPKVLR 627 >UniRef50_B3E9T4 Type IV pilus secretin PilQ n=1 Tax=Geobacter lovleyi SZ RepID=B3E9T4_GEOLS Length = 891 Score = 362 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 118/410 (28%), Positives = 211/410 (51%), Gaps = 20/410 (4%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 G +KVTL D V ++ Q L+E N V+ +V+GT+SL L +VPW QAL + Sbjct: 487 GKARYNGRKVTLEFADAEVRKIFQLLSEVSNKNFVLGDEVTGTISLKLVNVPWDQALDII 546 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 + + GL R+EG I+ + + + + + + PL+ + YAD + Sbjct: 547 LDTKGLDKREEGTIVLIRGKGKFKSLLDEEMEIRKSTLKSEPLQTAMFDVNYADLASIVS 606 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + + +G +T D+RTN+++++D K+A+ + + +A +D+P QV + A IV + Sbjct: 607 QFNSIKTDRGLITQDQRTNKVIVKDVKSAVDDMRKILASLDVPEKQVMIEARIVEASSTF 666 Query: 195 LRELGVKWTLADAQHAGGVGQVTTLGSDLS------------VATATTHVGFNIGRINGR 242 + LGV W + + + + ++ ++ + G + G ++ Sbjct: 667 TQSLGVNWGIHYRDGSASIAGINSMDTNFGGLASTAPTSSGVSGSPGAAAGISFGTLSSN 726 Query: 243 L-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAV 301 + LDL L+A + I+++PR+ + + A I QG +IPY S+ + T +F EA Sbjct: 727 IKLDLRLNAAVSAGLVRIVSTPRVATLNHKSAKITQGQQIPYTASTSDKIET--KFVEAA 784 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 L +EVTP + G + +K+ + PG + G AI+K++ T++ ++ GET +G Sbjct: 785 LALEVTPHINPNGTVVMKIDAKNDSPG-----STGNPPAINKKQATTEMMLRDGETTVIG 839 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 GIF + D VP L D+PW G LF+ + + R EL++FITPR+++S Sbjct: 840 GIFVESESNNDDGVPFLADVPWLGGLFKSNETKRNRNELLIFITPRIINS 889 >UniRef50_Q0AF45 Type IV pilus secretin PilQ n=3 Tax=Nitrosomonas RepID=Q0AF45_NITEC Length = 720 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 131/424 (30%), Positives = 215/424 (50%), Gaps = 40/424 (9%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L DV + +LQ +A+ LN++ S V G ++L L DVPW QAL V++++ Sbjct: 293 YTGEKLSLNFQDVEIRSILQVIADFTDLNIIASDSVKGNLTLRLKDVPWDQALDIVLQTS 352 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 L R+ GN++ + Q + + L+ + L Y A + + Sbjct: 353 DLDKRRVGNVIFIAPREEMAARERLQLEQNQQITELEVLQTEAFRLNYRTASSIP--LKG 410 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 +LS +GS+ VD +N L + D T L+ + + VA +D V QV + IV + R L Sbjct: 411 ILSQRGSVEVDDISNTLTVTDIPTRLAEVARHVANLDTQVRQVMIETRIVEATDTFSRNL 470 Query: 199 GVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLD------------- 245 G ++ + +A G LG ++ ++ I G L+ Sbjct: 471 GARFGVQNATRIGSQTNGRRLGISGNLGNSSELAAGTISPSGGDNLNVNLPAAALAGVAG 530 Query: 246 -------------------LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 LELSALE Q IIASPRL+ ++ ASI+QG+EIP+Q Sbjct: 531 GPAALGLSLIKINNGTLINLELSALESDSQGRIIASPRLVTANRVEASIEQGTEIPFQTI 590 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 S ++FK+AVLG++VTP + I +KL ++Q+ G+ AID ++I Sbjct: 591 SVTR--PQIQFKKAVLGLKVTPQITPDDNIIMKLQVNQDTRGESTPAG----PAIDTKQI 644 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 T+V V++G T+ +GGIF + K ++ +PLLGD+P G LF++ K D++REL++F+TP Sbjct: 645 VTEVLVENGGTVVIGGIFEQVEKRDRNQIPLLGDVPLLGNLFKNTAKRDDKRELLIFVTP 704 Query: 407 RLVS 410 R+++ Sbjct: 705 RILN 708 >UniRef50_Q2BLX9 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLX9_9GAMM Length = 702 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 131/417 (31%), Positives = 214/417 (51%), Gaps = 26/417 (6%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV 75 + +K+ L +V + VLQ +AE +LNLVVS V G ++L L +VPW QAL ++ Sbjct: 286 LFQFTGEKIDLNFQNVELRSVLQIIAEVAELNLVVSDTVGGNITLRLKNVPWDQALDIIL 345 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 K+ GL R GN+L + A ++ + + PL I + Y A E+ Sbjct: 346 KTKGLDQRTVGNVLLIAPAAEIAERERQELESSKQVEQLAPLRTEFIQVDYRKASEMMST 405 Query: 136 GE--KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 + K++S +G + D TN L++R+ TAL + + + D+ V QV + A +V Sbjct: 406 IQEAKMVSERGFVMADDETNVLMVRETATALRDIRNILKKFDVEVEQVLVEARLVNATSN 465 Query: 194 SLRELGVKWTLADAQHAGGVG-----QVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL 248 ++LGVKW G G + + + A T+++ ++G + + Sbjct: 466 VTKDLGVKWGFGYNDVDNGKGWIVDNSIGNVNFGNTTAGNTSNLMVDLGASVTSPGTIAI 525 Query: 249 SA--------------LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 LE + +I++ P++L ++ + A I+ GSEIPYQ E G S Sbjct: 526 GFKPGASSLLALELSALETDGKAEIVSQPKVLTTNGKQAKIESGSEIPYQTV--EDGEVS 583 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 +EFK+ VL ++VTP + RI + L I+Q+ GQVL + ++ID E++T V V Sbjct: 584 IEFKDVVLSLDVTPRINPGDRIAMDLLITQDSIGQVLPNGE---ISIDNNELQTTVVVPD 640 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G+T+ LGG+F + + VPLLGD+P G LFR+ + E+ EL++FITP+LV + Sbjct: 641 GQTIVLGGVFKNETSETINKVPLLGDLPIMGPLFRNKENQAEKTELLIFITPKLVRN 697 >UniRef50_A6GPK2 Pili assembly protein PilQ n=1 Tax=Limnobacter sp. MED105 RepID=A6GPK2_9BURK Length = 681 Score = 360 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 134/420 (31%), Positives = 220/420 (52%), Gaps = 15/420 (3%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH 61 K + V + +TL D + V+Q A+ K+NLV+S V G V++ Sbjct: 268 KAIELKAVTSAQSVVARYTGRPITLDFKDADIRTVMQVFADFTKMNLVLSDSVQGKVTVF 327 Query: 62 LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRS 121 L DVPW QAL V++S GL++ Q GN+L V + N+ Q A + PL ++ Sbjct: 328 LKDVPWDQALDIVMRSKGLVSSQAGNVLLVSTPTDVTNDQF-QTANRRAQDEMEPLVSKV 386 Query: 122 ITLQYADAGELAKAGEK----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 + Y +L + LLSA+G++ D+RT+++ ++D T L + V +D P Sbjct: 387 FQVSYQKTADLVALIKSEDSKLLSARGTLISDERTSQIFVQDTPTRLERISMIVNGLDKP 446 Query: 178 VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIG 237 V QV + A +V + R+LG++ A+ G +V + N+G Sbjct: 447 VKQVMIEARVVLADTSVSRDLGIRLRALSARADPGFDEVGDQFGSGNFVNTGVENATNLG 506 Query: 238 RI-----NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 + RL++L+L ALE + ++ +++PR++ S+ +PA I+QG+EIPYQ+++ SGA Sbjct: 507 YTLFNANSTRLINLQLRALELENKVRTVSNPRVITSNKEPALIEQGTEIPYQIATS-SGA 565 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 T+ EFKEA L + VTP + G + L + ++++ G AID + ++T+V V Sbjct: 566 TATEFKEANLKLAVTPQIAPDGTVLLDVDVAKDSIGIETSNG----PAIDTRRVKTKVLV 621 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G T+ LGGIF + D P LGDIP G LFR + R EL++F+TP +++S+ Sbjct: 622 SDGGTVVLGGIFEEDDNVLNDKTPFLGDIPGLGVLFRGKNESRRRAELLIFLTPVVLTSQ 681 >UniRef50_B6SE80 PilQ n=1 Tax=Kingella kingae RepID=B6SE80_9NEIS Length = 700 Score = 360 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 126/429 (29%), Positives = 208/429 (48%), Gaps = 33/429 (7%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 Q ++++L ++ V VLQ LA++ +N+V S V G ++L L DVPW QAL V Sbjct: 268 AQQNFTGKRISLDFQNIEVRTVLQILAQESGMNIVASDSVQGKMTLSLKDVPWDQALDLV 327 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 + + L R+ GNI+++ + + + + L +++ L+Y + E Sbjct: 328 MDARNLDMRKHGNIINIAPRQELLDKDRNEAKARREMEDLGALYSKTFQLKYKNVEEFKN 387 Query: 135 AGE-----------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 +LS +GS +D TN L++ DN++ + E+ + ++D+P QV + Sbjct: 388 ILRLSDSPNTNDRSNILSTRGSALIDPATNTLIVTDNQSVIQKFERLIDELDVPAKQVMV 447 Query: 184 SAHIVTINEKSLRELGVKWTLADAQ----HAGGVGQVTTLGSDLSVATATTHVGFN---- 235 A IV + R LGVK+ + + T+T V FN Sbjct: 448 EARIVEAADGVSRSLGVKFGARRNGATSWGGDWNNSIALNNRSTNSGTSTGGVAFNPNVN 507 Query: 236 ------------IGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 I L LELSA+E + I++PR+L + A I+QG++IPY Sbjct: 508 LPVASATSSISVIHSWAAGALGLELSAMETENLTKTISTPRVLTQDRKEAEIRQGTQIPY 567 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 S + G +S FK+AVL ++VTP + +I L + I+++ P A+GE I Sbjct: 568 TTRSSD-GDSSTAFKDAVLSLKVTPRITPDSKIILDIAINKDEPDYNNVNAEGE-PGIVT 625 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 + ++TQ ++ G TL +GGI+ + + VPLLGDIP G LF+ + R EL+ F Sbjct: 626 RAVKTQAMIEDGATLVVGGIYQEQMANNVSKVPLLGDIPVLGNLFKSRSRSRSRNELLFF 685 Query: 404 ITPRLVSSE 412 ITPR++ +E Sbjct: 686 ITPRIMGAE 694 >UniRef50_Q1K2X4 Type II and III secretion system protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2X4_DESAC Length = 727 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 115/410 (28%), Positives = 202/410 (49%), Gaps = 20/410 (4%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + + VTL++DD + +V+Q +AE LN+++S DV G VSL L DVPW QAL + Sbjct: 324 APKVYTGEPVTLVLDDADIRKVMQLIAEISNLNIILSDDVKGKVSLRLHDVPWDQALDLI 383 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 + L T +GN++ + + A + + + Y D + Sbjct: 384 LDVKQLGTITQGNVVRILPLGTIKKMEAERLKATKDIKKLEETRTEIFVINYKDTEAIED 443 Query: 135 AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + +LS +G + + + + ++++ D + L + + Q+D PV QV + A IV + + Sbjct: 444 VIDDVLSNQGEVQLIEGSKKIMVNDIPSKLEEIRMLINQLDEPVKQVLIEARIVEADTSA 503 Query: 195 LRELGVKWTLADAQHAGGVG--------------QVTTLGSDLSVATATTHVGFNIGRIN 240 + G+ W +G G + + T + F ++ Sbjct: 504 EQTFGIHWGFEFDNDSGSSGGGIGSSLDNAVVGLGGNFITPTSATDGLGTALTFGRVGLD 563 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 +LDL+LSALE +I+SP+++A + A I QG+EIPY+ +S T+ EFK+A Sbjct: 564 TIVLDLQLSALESSGGGKVISSPKVMALDGETARIGQGTEIPYKTTSDNG--TTTEFKKA 621 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 L +EVTP + I L++ + + PG AI+ +E ET++ +K+GET + Sbjct: 622 ELALEVTPLINPDNTILLEILATNSSPGVAYTDGV----AINTKEAETKLLLKNGETTVI 677 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 GGI+T ++ P L D+P+ G LF++ ++R EL++F+TP +V Sbjct: 678 GGIYTENEQNSDSGTPYLKDLPFIGNLFKYKTSSNDRTELLIFLTPHIVD 727 >UniRef50_Q1GYG5 Type II and III secretion system protein n=3 Tax=Methylophilaceae RepID=Q1GYG5_METFK Length = 723 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 139/449 (30%), Positives = 227/449 (50%), Gaps = 62/449 (13%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L ++ V VLQ +A+ LN+V S V+G ++L L DVPW QAL ++ S Sbjct: 274 YAGEKLSLNFQNIDVRSVLQVIADFTGLNIVTSDTVTGNLTLRLKDVPWDQALDIIMSSK 333 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-- 136 GL R+ GN++ V + + P+ TL+Y A Sbjct: 334 GLTQRKTGNVIWVAPSDEVAAKEKLLLEASQQIEELEPMRTEVFTLRYQKAENFKNIISD 393 Query: 137 --EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +K+LS +GS VD RTN + ++D L ++ + ++D+PV QV + + +V +EK Sbjct: 394 SKQKILSKRGSAVVDARTNTVFVQDTAKHLEEVQSIINKIDIPVKQVMIESRLVIADEKF 453 Query: 195 LRELGVKWTLADAQHAGGV--GQVTTLGS------------------------------- 221 R LG ++ + Q +G G TLG+ Sbjct: 454 GRSLGARFGVQKQQASGDTRYGSSGTLGNTITQRTVDPTTGVITETIANRVGSSTLATTS 513 Query: 222 -------------------DLSVATATTHVGFNIGRI-NGRLLDLELSALEQKQQLDIIA 261 +L VA A + F++ R+ G LL+LELSALE Q+ I++ Sbjct: 514 IPGTVGVGVSPDGAQDLNVNLPVANAFGNFAFSLFRLPAGFLLNLELSALETDQRGKIVS 573 Query: 262 SPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLH 321 SPR+ ++ Q A I+QG++IP+Q ++ SGAT+V+FK A L +EVTP + +I + L Sbjct: 574 SPRVTTANQQKAIIEQGTQIPFQQATS-SGATAVQFKNASLSLEVTPQITPDEKIIMDLE 632 Query: 322 ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDI 381 + ++ G V V +ID Q ++TQV V +GET LGGI+ + ++ D VP GD+ Sbjct: 633 VKKDKVGVVF----NNVPSIDTQRVQTQVLVANGETAVLGGIYEQTERNDVDKVPFFGDL 688 Query: 382 PWFGQLFRHDGKEDERRELVVFITPRLVS 410 P+ G +F+ K+ ++ EL++FITP+++ Sbjct: 689 PFLGNVFKRRVKQSDKTELLIFITPKVMD 717 >UniRef50_A7BUG3 Bacterial type II and III secretion system protein n=3 Tax=Gammaproteobacteria RepID=A7BUG3_9GAMM Length = 698 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 122/430 (28%), Positives = 220/430 (51%), Gaps = 42/430 (9%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEK--LNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + Q V+ D+ V L L + LN+V S V G+++L L ++PW QAL +++ Sbjct: 270 YEGQLVSFNFQDIDVRAALTLLFDLPGVNLNMVASDVVKGSITLRLKNIPWDQALDIILE 329 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + L R+ GN+ + + R+ + + + + L I + YA A ++ Sbjct: 330 ARELGMRKIGNVAMIDLKKNIDERKQRELSNKKKIKELESLYTEFIRINYAKAKDIEALL 389 Query: 137 EK-----LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 LS++G+++ D+RTN L+++D ++ + + +A++D PV QV + + IV N Sbjct: 390 RTSGQHSFLSSRGNVSTDERTNTLIIQDTAAKIAEIRKLLAELDTPVRQVLIESRIVIAN 449 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFN---------------- 235 + LGVK+ + + G + G T + GF+ Sbjct: 450 NNFSKALGVKFGYSANEDLGFGNGIVFGGKKGGDTTFSGGTGFSSDNTATGEGQGENFIV 509 Query: 236 ---------------IGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSE 280 IG+I LL LELSA++ + +II++PR++ + Q A I QG+E Sbjct: 510 SLPAAIANPAAVGLAIGKIGSYLLQLELSAMQSEGSGEIISNPRIITGNQQEAIITQGTE 569 Query: 281 IPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLA 340 IPY +G V+FK+AVL ++VTP + R+ ++L + ++ PG + G L+ Sbjct: 570 IPYVQQAGVGSVAQVQFKQAVLELKVTPQITPDDRVNMELAVKKDSPGVNI----GGNLS 625 Query: 341 IDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERREL 400 IDK+E++T V V +GET+ LGG++ R + + +P D+P G+LF++ K D++ EL Sbjct: 626 IDKREVKTNVLVDNGETVVLGGVYERTRSNAINRIPFFADLPLIGELFKNRSKSDDKSEL 685 Query: 401 VVFITPRLVS 410 ++F+TP+++ Sbjct: 686 LIFVTPKILK 695 >UniRef50_Q60BY4 Fimbrial assembly protein PilQ n=1 Tax=Methylococcus capsulatus RepID=Q60BY4_METCA Length = 729 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 137/437 (31%), Positives = 222/437 (50%), Gaps = 48/437 (10%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 ++++L D+PV VLQ LA+ LN+V S V G+V+L L +VPW +AL V+K+ Sbjct: 290 FAGERLSLNFQDIPVRNVLQILADFTNLNIVASDSVQGSVTLRLNEVPWDEALDLVLKAK 349 Query: 79 GLITRQEG--NILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 GL RQE N++ V + N + + + PL I + Y A ++ K Sbjct: 350 GLGKRQEANSNVIRVAPLDEINRSERDELEALKVVEDLEPLRTEIIQINYTKADDIKKVI 409 Query: 137 --------------------------------EKLLSAKGSMTVDKRTNRLLLRDNKTAL 164 + +LS++G++T D RTN+L+++D L Sbjct: 410 MGTTEKAEKAITRPEALTGGPGVTSTEAYDVTQSILSSRGNVTTDPRTNQLIVQDTPRNL 469 Query: 165 SALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGG-----VGQVTTL 219 + V Q+D PV QV + + +V N LRELG K G + L Sbjct: 470 ERIRDLVRQLDKPVRQVMIESRVVIANVDFLRELGAKLDFRPKNLTAAERLNPTGSMADL 529 Query: 220 GSDLSVATATTHVGFN--IGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 G DL+ T + G + + LLDLELSA +++ + +I+A+PR+L + A I Q Sbjct: 530 GVDLAKLTTLSPYGTAQYVVSMGDYLLDLELSAAQKEGRGEIVANPRVLTADQSKAKIMQ 589 Query: 278 GSEIPYQVSSGESG----ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQ 333 G E+PYQ++ +G +V FK AVL ++VTP + I + L + ++ G++ Sbjct: 590 GVELPYQITQQGTGGGIPVQNVAFKPAVLELDVTPHITPDDHILMDLMVKKDDKGELAPN 649 Query: 334 ADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGK 393 + AI+K+EI+T +V +GET+ LGG++ ++ D VP GD+P G +FR + Sbjct: 650 GNF---AIEKREIDTVAQVANGETVVLGGVYEGTRRNNTDKVPFFGDLPGIGFMFRRNAV 706 Query: 394 EDERRELVVFITPRLVS 410 ED ++EL++FITP++V Sbjct: 707 EDRKKELLIFITPKIVK 723 >UniRef50_B2I0J4 Type II secretory pathway, component HofQ n=13 Tax=Acinetobacter RepID=B2I0J4_ACIBC Length = 721 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 129/469 (27%), Positives = 221/469 (47%), Gaps = 70/469 (14%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ 69 + + K++L D+ V +VLQ LA+ +N+V + V G ++L L DVPW Q Sbjct: 250 VTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQ 309 Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 AL ++K+ L R+ GN++ + +A + A++ PL+ I L+YA A Sbjct: 310 ALDIILKTKNLDKRRNGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAKA 369 Query: 130 GELAKAGE-----------------------------------KLLSAKGSMTVDKRTNR 154 G++ LLS +G++T D RTN Sbjct: 370 GDIMGLITQGSNNSNGLQHTSGGGTSTSTNLNTGVDSLGNNVGSLLSPRGTITQDDRTNT 429 Query: 155 LLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVG 214 L++ D ++ + + + +D+ V QV + A IV + +ELGVKW + Sbjct: 430 LIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGILSQGITNNNN 489 Query: 215 QV------------------------------TTLGSDLSVATATTHVGFNIGRINGRLL 244 + L DL V+ + F + ++ +L Sbjct: 490 LLVGGSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVSNPAGSIAFGLISMSDFML 549 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE--SGATSVEFKEAVL 302 DLELSAL+ ++I++P+++ + Q A + G ++PYQ ++ + FK+A+L Sbjct: 550 DLELSALQADGYGEVISTPKVMTADKQTAKVATGQQVPYQSTTNSAAGSTATTSFKDALL 609 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 + VTP++ G+I++KL IS++ + L ++K I T V V +GET+ LGG Sbjct: 610 SLNVTPSITPDGKIQMKLDISKDSVAGAAPNGE---LILNKNNINTNVLVDNGETVILGG 666 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +F + + Q VP GDIP G+LFR D K D+++EL++F+TPR+V+ Sbjct: 667 VFEQTTMNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVND 715 >UniRef50_Q5P5P1 Fimbrial type-IV assembly protein PilQ n=4 Tax=Betaproteobacteria RepID=Q5P5P1_AZOSE Length = 721 Score = 357 bits (916), Expect = 5e-97, Method: Composition-based stats. Identities = 122/434 (28%), Positives = 211/434 (48%), Gaps = 44/434 (10%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L ++ V VLQ +A+ N++ S V G ++L L DVPW QAL ++++ Sbjct: 286 YSGEKLSLNFQNIDVRSVLQVIADFTNFNIITSDSVQGNLTLRLKDVPWDQALDIILQAK 345 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-- 136 GL R+ GN++ + Q QA+ P++ S + Y A E+ Sbjct: 346 GLDMRKTGNVIWIAPSEELAMREKLQLEAQAQIGDLEPVQTESFQINYHKAKEIFDFLKS 405 Query: 137 --EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + +LS +GS+ +D+R+N+L + D + L A+ + V ++DL QV + A IV N+ Sbjct: 406 KDQTMLSKRGSVVMDERSNKLFVTDVVSRLDAIRRLVGEIDLLPRQVMIEARIVEANKDF 465 Query: 195 LRE-----------------------------------LGVKWT-LADAQHAGGVGQVTT 218 R+ G A A Sbjct: 466 ARDLGVRLGVGGVGGRTVGFDANGRPIRRATVGGGLENTGFNAGQTVAATDAQVATVPGG 525 Query: 219 LGSDLSVATATTHV-GFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 L +L + + R L+LELSALE + I++SPR+L ++ A I+Q Sbjct: 526 LNVNLPAPGGSGVLSAVLWNNTATRFLNLELSALESDGRGRIVSSPRVLTANQVEAVIEQ 585 Query: 278 GSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE 337 G++IPY + SGA S++F++AVL ++V P + +GR++L + ++++ P Sbjct: 586 GTKIPYPEKTS-SGAASIKFEKAVLSLKVKPQITPEGRVQLFVLVNKDRPDFARSVEG-- 642 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 + + I+T+V V++G T+ +GGI+ + +PLLG++P G LFR+ K +R Sbjct: 643 TPTVVTKNIQTEVLVENGGTVVIGGIYEEEETDSVTRIPLLGEVPLVGALFRNTIKNSKR 702 Query: 398 RELVVFITPRLVSS 411 EL++FITPR+V+ Sbjct: 703 SELLIFITPRIVAD 716 >UniRef50_Q6F7E3 Putative outer membrane protein (ComQ) n=3 Tax=Acinetobacter RepID=Q6F7E3_ACIAD Length = 723 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 122/447 (27%), Positives = 217/447 (48%), Gaps = 57/447 (12%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L D+ V +VLQ LA+ +N+V + V G ++LHL DVPW QAL ++K+ Sbjct: 274 YTGKKISLDFQDIEVRRVLQLLADFTNINMVTADSVQGNITLHLKDVPWDQALDIILKTK 333 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE- 137 L R+ GN++ + ++ + + A++ PL+ I L+YA A ++ K Sbjct: 334 NLDKRRNGNVIWIAPVSELIKSEEDEAKAIAQSTKLAPLQTEYILLKYAKAADIEKLITQ 393 Query: 138 -------------------------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVA 172 LLS +G++++D RTN L++ D + + + + Sbjct: 394 GRNSGTSNSNTNGSATVEPLGDSVGTLLSPRGTISLDPRTNTLIINDTSQKIDQIRKMID 453 Query: 173 QMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD---------- 222 +D+PV QV + A IV +E+GVKW + + Sbjct: 454 LLDIPVKQVMIEARIVRATTSFSKEMGVKWGILSQGINQNSNLLVGGSETTLWNLRNPDS 513 Query: 223 ----------------LSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLL 266 T + + F + ++ +LDLELSAL+ ++I++P+++ Sbjct: 514 NGTYTIERPDNLNVDLGVTTTGASSIAFGLISLSDFMLDLELSALQADGYGEVISTPKVM 573 Query: 267 ASHLQPASIKQGSEIPYQVSSGE--SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQ 324 ++ Q A + G E+PYQ ++ + FKEA+L +EVTP + G+I ++L+I+ Sbjct: 574 SADKQKAKVATGVEVPYQSTTNSAAGSTATTSFKEALLSLEVTPNITPDGKILMELNIAN 633 Query: 325 NVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWF 384 + Q + ++K I T V V +GET+ LGG+F + + VP LGD+P+ Sbjct: 634 DSINSYAQNGEA---ILNKNTINTNVLVNNGETVVLGGVFEQTTNNAVTKVPFLGDLPYV 690 Query: 385 GQLFRHDGKEDERRELVVFITPRLVSS 411 G+LF+ K + + EL++F+TPR+V+ Sbjct: 691 GRLFKKTAKSEAKNELLIFVTPRIVND 717 >UniRef50_Q6MPI6 Fimbrial assembly protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPI6_BDEBA Length = 726 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 110/412 (26%), Positives = 196/412 (47%), Gaps = 11/412 (2%) Query: 9 LLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWK 68 L + G +K+++ ++ + L + E+ +N+V+S DV G VSL L VPW Sbjct: 300 LTEFLAGNTKFYGKKISIETSNMDIRDALNFITEESGVNMVISEDVKGAVSLKLRQVPWD 359 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 QAL ++K+ L ++GN+L + + + PL+ R + YA Sbjct: 360 QALVVIMKAKKLGYTRQGNVLRIAPLQDLKAEEDDATKLAQARKNLEPLKVRMFPVSYAK 419 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 EL K + L +G + D RTN L++ D + L + +A +D QV + IV Sbjct: 420 VDELEKKIKDFLGDRGRVVGDVRTNALVVTDIEENLERAARLIASLDTQPAQVSIEGKIV 479 Query: 189 TINEKSLRELGVKWTLA------DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGR 242 E R +GV W+ + G V + + S A ++ + FN+ Sbjct: 480 EAKESFTRNIGVNWSATGAPIKLGSTARGPVNMNPSFNVNQSAAGSSGALNFNLNVGTLD 539 Query: 243 LLDLELSAL---EQKQQLDIIASPRLLASHLQPASIKQGSEIPY--QVSSGESGATSVEF 297 + +AL E ++Q+ II++PR++ + A I Q +E+P +G + + +F Sbjct: 540 IFGTLSAALALNESEEQVKIISAPRIMTLSNEKADINQTTEVPVRQVTQNGTATQETFQF 599 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 K L +EVTP V G + +K+ +++ G + A A++ +E T+V VK+G+T Sbjct: 600 KPLTLKLEVTPQVTADGSVIMKVLVNRQFRGADVSSAGQGAFAVNSREANTRVLVKNGQT 659 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 +GGI+ G+ VP ++P+ LF+ E+ EL++F+TPR++ Sbjct: 660 AVIGGIYQSDATDGEVGVPWFRELPFVSYLFKTKNISKEKSELLIFLTPRIM 711 >UniRef50_A5EW26 Type IV fimbrial pore PilQ n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW26_DICNV Length = 734 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 132/447 (29%), Positives = 221/447 (49%), Gaps = 52/447 (11%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 + + ++L D+ V VL +AE + N+VVS VSG ++L L +VPW QAL Sbjct: 276 FAPNKVYTGEPLSLNFQDIEVRAVLNIIAEFTQQNIVVSDTVSGNITLRLDNVPWDQALD 335 Query: 73 TVVKSAGLITRQEGN-----ILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYA 127 ++K+ GL R+ GN I+ + + + Q +P++ I ++YA Sbjct: 336 IIMKTKGLAKRENGNDKTGRIIYIAPEKELDTAEIDALEGWQKKQQLMPMQTDFIRIKYA 395 Query: 128 DAGELAKAGEK-------------------LLSAKGSMTVDKRTNRLLLRDNKTALSALE 168 A +L + EK +LSA+GS+T+D+R N L++ D + A+ Sbjct: 396 KASDLQRILEKSREISSDGTKNGILAAQDAVLSARGSVTIDERMNALIVSDIPAKIQAVR 455 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATA 228 VA++D V QV + A +V + R+LG ++ L+ AG V + + A Sbjct: 456 DLVARLDESVRQVLVDARLVITKDNFARDLGARFGLSFKGTAGSNPIVGSGNLTGTTFYA 515 Query: 229 T----------THVGFNIGRINGR---------------LLDLELSALEQKQQLDIIASP 263 +G N+G + L+DLEL AL+ + + ++I+SP Sbjct: 516 GMLEEKTIPIDNRLGVNLGIASPNVRAPSYGISILGSDVLVDLELQALQNEGRSEVISSP 575 Query: 264 RLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 R++ A + G EIPY + G+ ++KEA+L +EVTP V R+ +++ I Sbjct: 576 RVVTQDGNQAKVMSGQEIPYSTL-DDKGSVQTDYKEALLSLEVTPRVTPNDRVNMEIEIK 634 Query: 324 QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPW 383 ++ Q AIDK + T+VEV +GET+ LGGI+ ++ ++ VPLLGDIP Sbjct: 635 KDRVNWSEQVLGQ--PAIDKNLLNTKVEVANGETIVLGGIYEQEQSLSENKVPLLGDIPV 692 Query: 384 FGQLFRHDGKEDERRELVVFITPRLVS 410 G +F++ K+ + EL++FITPR++ Sbjct: 693 VGNVFKNTNKKFTKNELLIFITPRVID 719 >UniRef50_Q21H82 Type II and III secretion system protein n=11 Tax=Gammaproteobacteria RepID=Q21H82_SACD2 Length = 727 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 150/455 (32%), Positives = 226/455 (49%), Gaps = 64/455 (14%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 A K++L D+ V VLQ +A+ LNLV S VSG+++L L +VPW QAL V+K+ Sbjct: 272 AYVGDKLSLNFQDIQVRSVLQLIADFTDLNLVASDTVSGSITLRLENVPWDQALDLVLKT 331 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL----- 132 GL RQ G++L V A ++ Q + Q PL I ++YA+A EL Sbjct: 332 KGLDKRQVGSVLMVAPAAEIAARERQEIETQKQLQELAPLRTEYIRVRYANARELFNLFI 391 Query: 133 -------------------AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQ 173 + +LS +G VD+RTN ++L D + + + V + Sbjct: 392 DTSSGESGGAPGGSGSGSERNSTGSILSERGQAIVDERTNSIILTDTEEKIDDFRRLVDR 451 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVG 233 +D+PV QV + A IV N +ELGV+ + + + L+ TA G Sbjct: 452 IDIPVRQVMIEARIVIANSDFRKELGVRMAGDAVETSVSGDTKFEMTGRLTGLTAADGSG 511 Query: 234 ------------------------------------FNIGRINGRLL-DLELSALEQKQQ 256 F I+ L +ELSALE Sbjct: 512 PEALFVDTDGDGVTDDERSLLDSSLVDLGVFNPAGAFTWNVISSNFLLGMELSALENSGY 571 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRI 316 +I++ P+++ Q ASI+ G+EIPYQ S G T+ FKEAVL +EVTP + R+ Sbjct: 572 AEIVSQPKVITGDKQKASIESGTEIPYQEESASGGTTT-SFKEAVLKLEVTPQITPDNRV 630 Query: 317 RLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP 376 + L I+Q+ + A+ + ID ++ETQV V GET+ LGGI+T +G+ VP Sbjct: 631 IMDLVINQDSISSI--DANSGIPVIDITQLETQVLVADGETIVLGGIYTTNTFTGETKVP 688 Query: 377 LLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 LLGDIP+ G+LFR+D K +++RE+++FITPR+++S Sbjct: 689 LLGDIPFVGKLFRNDFKSEDKREILIFITPRIMAS 723 >UniRef50_A8ZSX5 Type IV pilus secretin PilQ n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSX5_DESOH Length = 987 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 106/419 (25%), Positives = 194/419 (46%), Gaps = 31/419 (7%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQTVVKS 77 + + L + V++ L + N + DVSG+V+L + VPW Q L +++ Sbjct: 575 FTGEPIALDFYKTDIRNVIRILKDVSGKNFAIDDDVSGSVTLSFVNPVPWDQVLDLILEM 634 Query: 78 AGLITRQEGNILSVHSIAWQNNNIA-------RQEAEQARAQANLPLENRSITLQYADA- 129 L + I+ + + A Q+ + + L ++ YA+A Sbjct: 635 NNLGMVEADGIIRIATQATLVQQKESEKAALTAQQDMKKAEETLASLVTEYFSISYANAG 694 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 ++ E LLS +G VD RTN++++ D + + + +A++D QV + A IV Sbjct: 695 EDILPHIEGLLSDRGHAKVDNRTNQVIMTDVEEKVEKAREIIAKIDKVTPQVMIKARIVE 754 Query: 190 INEKSLRELGVKWTLADAQHAGGVGQVTTLG--------------SDLSVATATTHVGFN 235 + RE G +W + + ++ + T + + +G N Sbjct: 755 TSSSFSREFGTEWGIDNRYNSPNINIGTDGAYRDEMGGTYTYDVALNSLSSPVQNLIGIN 814 Query: 236 IGRINGR--LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 RI G LD +LS +E + II++P+++ + A+I QG + PY V E G Sbjct: 815 FARIIGTPFSLDAKLSLMESTGDVKIISTPKVVTLDNKTATISQGIDYPYTVV--EDGEA 872 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 V++K L ++VTP V RI +KL+I +N G+++ + + + T++ V Sbjct: 873 DVKWKTIDLNLDVTPHVTPDDRISMKLNIQKNDVGEIINGEQ----SFNTKRASTELLVN 928 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G+T+ +GGI + +G+ VP + IP G LF++ + DE+ EL++FITP +V + Sbjct: 929 DGDTVVIGGIIKEREGAGERGVPWISKIPVLGNLFKYKTRSDEKSELLIFITPNVVRLD 987 >UniRef50_Q2P6L4 Fimbrial assembly protein n=13 Tax=Xanthomonadaceae RepID=Q2P6L4_XANOM Length = 649 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 123/464 (26%), Positives = 214/464 (46%), Gaps = 68/464 (14%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + + VT DVPV VLQ +AE+ LN+V S V G V+L L +VPW QAL V Sbjct: 180 AARGYSGRPVTFNFQDVPVRTVLQLIAEESNLNIVASDTVQGNVTLRLMNVPWDQALDIV 239 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 +++ GL R++G ++ V +E + + L + + Y +A + K Sbjct: 240 LRAKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNAAVIFK 299 Query: 135 AG--------------------------EKLLSAKGSMTVDKRTNRLLLRDNKTALSALE 168 A LS +G + D+RTN L++ D ++ + Sbjct: 300 ALTEAKGIGGGGGSGGGQGGQGGAGQQDNGFLSPRGRLVADERTNTLMISDIPKKVAQMR 359 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG----------------- 211 + ++ +D PV QV + + IV + R+LG ++ + A G Sbjct: 360 ELISHIDRPVDQVLIESRIVIATDTFARDLGARFGIIGATGRGILSGSLDSNTNYLNTSA 419 Query: 212 --------------------GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 G LG+ T T + LD+ELSA+ Sbjct: 420 KRASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTNTPGGLAYTLLGSNFNLDIELSAM 479 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV----SSGESGATSVEFKEAVLGMEVT 307 +Q+ + +++++PR++ ++ + IKQG EI Y +G +V+FKE +L ++VT Sbjct: 480 QQEGRGEVVSNPRIVTANQREGVIKQGREIGYVTISGSGAGGGSQANVQFKEVLLELKVT 539 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQAD-GEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 PT+ R+ L +++ ++ +++ G V I+++EI T V V GET+ +GG++ Sbjct: 540 PTITNDNRVFLNMNVKKDEVARLIDLPLYGTVPEINRREINTAVLVGDGETVVIGGVYEF 599 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 ++ VP LGDIP+ G LF+ G+ E+ EL+VF+TP+++ Sbjct: 600 TDRESVSKVPFLGDIPFLGNLFKKRGRSKEKAELLVFVTPKVLR 643 >UniRef50_B9TDF1 Fimbrial assembly protein pilQ, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TDF1_RICCO Length = 536 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 120/427 (28%), Positives = 210/427 (49%), Gaps = 39/427 (9%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L + + V +L+ + + N+VVS + GT++L L DVPW QAL ++K Sbjct: 110 FSGEKLSLDFNGIDVKSLLRIIGDFTGKNVVVSDSIQGTITLRLKDVPWDQALDIIMKQK 169 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-- 136 GL GN L + + ++ + PL +S ++Y A ++ Sbjct: 170 GLGMDNLGNTLVFAPKEEIAARRKQDQEQENQIDETKPLVTQSFQIKYQKAADIKTLISD 229 Query: 137 --EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + LLS +G+ VD TN + ++D T+++ +++ + ++D+P QV + + IV N+ Sbjct: 230 PKQPLLSKRGTAVVDPSTNTMFVKDIDTSMTKIQEILNKIDIPSRQVLIESRIVQANDTF 289 Query: 195 LRELGVKWTL----------------------ADAQHAGGVGQVTTLGSDLSVATATTHV 232 + LG ++ + + +A G + TT DL+V + Sbjct: 290 GKSLGARFGVVKNNALTAKGLNPGNDVLTSGSLSSTYATGQAKQTTTPDDLNVNLPASAT 349 Query: 233 GFNIGRI--------NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ 284 + G LL++ELSA E ++ I+SPR++ ++ Q A+ G+EIPYQ Sbjct: 350 AGTVSSAALTLLRLPAGFLLNMELSAAESDSKIKTISSPRVITANQQTATFDAGTEIPYQ 409 Query: 285 VSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 ++ SGATSV FK+A LG+ VTP + +I L + ++++ GQ+ V +ID Sbjct: 410 QATS-SGATSVSFKKATLGVNVTPQITPDDKINLDIEVTKDDVGQIF----NGVPSIDTN 464 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 +++T+V V +GET LGG VP IP G LF+ ++EL+ FI Sbjct: 465 KVKTKVLVDNGETAVLGGFLIESKNDSNQRVPFFSSIPVVGNLFKSTLNTHSKKELLFFI 524 Query: 405 TPRLVSS 411 TP+++S Sbjct: 525 TPKIMSD 531 >UniRef50_C5A9K2 Type II/III secretion system protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9K2_BURGB Length = 649 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 131/435 (30%), Positives = 209/435 (48%), Gaps = 49/435 (11%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 ++++L + P+A V A A ++V+S V G +L L DVPW+ A ++ + GL Sbjct: 202 RRISLDLQQAPLAAVFDAFARFTGQSIVLSGRVQGAATLRLRDVPWRDAFDALLDANGLA 261 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG----- 136 + G ++ V +A + AR A PL +R+ L+Y A ++A+ Sbjct: 262 MARRGGVIWVAPVAELAARERARFETHARTAALEPLASRAFVLRYPRAKDVARLLTGGAA 321 Query: 137 -EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 +++LS +GS+ D RTN L + D L+ + +AQ+D P QV + A IV Sbjct: 322 GQRVLSRRGSVLADPRTNLLFVTDLDGRLAQIAALLAQLDRPSRQVLIEARIVEGERGFS 381 Query: 196 RELGVKWTLADAQ------------------------------HAGGVGQVTTLGSDLSV 225 RELG + L + G V G L Sbjct: 382 RELGARLALRSSAWGGSRAGAGAGGSGGSDGGAGGAAMPDSNPGGAATGIVGGPGGRLLD 441 Query: 226 ATATTHVGFNIGRIN--------GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 +A GF RLLDLELSALE + + I++SPR++ + PA I+Q Sbjct: 442 LSARPLAGFEAATAGLTLFVAGASRLLDLELSALEAQGRGRIVSSPRIVTADRAPALIEQ 501 Query: 278 GSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE 337 G+E+PYQ G G + V+F+ A L +EV P + +G + L L ++++ G+ Sbjct: 502 GTELPYQAKVG-LGVSGVQFRRATLKLEVEPQITPEGHVVLDLDVAKDSVGESTDAG--- 557 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 AI + + T+VE+++G T+++GGI+ + VP+LG IP G LFRH + Sbjct: 558 -PAIHTKHVRTRVEIENGGTVSIGGIYESDRRDDVTRVPVLGKIPMLGALFRHRARRQRT 616 Query: 398 RELVVFITPRLVSSE 412 ELVV+ITPR+V ++ Sbjct: 617 AELVVYITPRVVGAQ 631 >UniRef50_A9GGP4 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP4_SORC5 Length = 774 Score = 350 bits (899), Expect = 6e-95, Method: Composition-based stats. Identities = 136/441 (30%), Positives = 217/441 (49%), Gaps = 40/441 (9%) Query: 7 ALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVP 66 A + + + +++ L + D + VL+ +++ ++N+V + +VSGTV++ + +VP Sbjct: 330 AFMPAIAGQQRRFTGRRIDLDLKDADIHNVLRLISDVGRVNIVTADNVSGTVTIRMRNVP 389 Query: 67 WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 W QAL+TV+++ GL ++GN++ V IA N A + PLE R I + Y Sbjct: 390 WDQALETVLQAKGLGVVRQGNMIRVAPIADLNKERELAIARRKSELQLAPLETRLIPINY 449 Query: 127 ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 ADA +L + +LS +GS+ VD+RTN L+ RD L+ +E+ V +D QV + A Sbjct: 450 ADAKDLQDRSKDMLSPRGSLAVDERTNVLIARDVAGNLNQIEELVRSLDTQTPQVLIEAR 509 Query: 187 IVTINEKSLRELGVKWTLADA-----------------QHAGGVGQVTTLGSDLS----- 224 +V + +R++G++W AGG + LS Sbjct: 510 VVEATSRYVRDIGIQWGGDGTFSAATGNPTGLVFPSAIGIAGGATDSNSPTGGLSPFSSQ 569 Query: 225 --------------VATATTHVGFNIGRINGR-LLDLELSALEQKQQLDIIASPRLLASH 269 A +GF +G IN L + LSA E L +++SPR+L Sbjct: 570 VSNPNFAVNLPAIVGAGQGGALGFTLGSINNTVNLGVRLSAAEASGMLRVVSSPRILTLD 629 Query: 270 LQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQ 329 + A I QG+ IP+ S + T+ F+EA L + V P V G + + + I+++ P Sbjct: 630 NREARISQGTLIPFSQISAQGVQTT--FQEAKLQLLVKPHVTSDGSVAMHVKINRDEPDF 687 Query: 330 VLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFR 389 A G+ I K+E ET + + G T +GGIFTR D VP GDIP G LF+ Sbjct: 688 NQTSARGD-PTILKREAETDLLIMDGHTAVIGGIFTRNTGRNLDQVPFFGDIPVLGLLFQ 746 Query: 390 HDGKEDERRELVVFITPRLVS 410 D R ELV+F+TPR+V+ Sbjct: 747 RRRASDTRNELVIFLTPRIVN 767 >UniRef50_C0GVZ8 Type II and III secretion system protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVZ8_9DELT Length = 504 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 113/405 (27%), Positives = 202/405 (49%), Gaps = 17/405 (4%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +VTL + PVA +L+AL+ N++VS V GT +L++ DVPW QA ++++ S GL Sbjct: 101 DRVTLNMQQAPVATILRALSRIADQNIIVSETVEGTANLNIRDVPWDQAFKSIIASQGLS 160 Query: 82 TRQEGNILSVHSIAWQNNNIARQEA------EQARAQANLPLENRSITLQYADAGELAKA 135 EG IL + S+ + + R + A+ PL +R + L YAD +L Sbjct: 161 YVWEGEILRIKSMQDLQHELDRAGLKEDIGRRKLAAELTAPLMHRIVKLNYADPEKLQDN 220 Query: 136 GEKLLS------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 + LS GS+ VD+ TN L+++ + + + + + +D P Q+ + A+IV Sbjct: 221 LIRFLSRDGDGEPHGSIVVDEETNSLMIQATRNDMERVHKAINHLDRPRPQILMEANIVE 280 Query: 190 INEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI--GRINGRLLDLE 247 +++ RELGV+W+ +V A T + ++ R+ G +L Sbjct: 281 ATQRTARELGVRWSGRYVTPLSFEDEVGFGDLLRDEAGYTGDMDLSVISARLPGSVLYAH 340 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 L ALE+ +++I+ SP + Q A + G +PY+ E G+ +VEF++AVL +EV Sbjct: 341 LQALERDGEVNILTSPSITTMDNQMAFTEHGQRVPYETV-DEDGSRTVEFEDAVLRLEVV 399 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 P+V++ +++ + ++++ I + ET + V+ GET+ + G+ Sbjct: 400 PSVMEGNHLKMDIRVNKDEVDFTRDVRGQ--PVIRTKHTETNLVVRDGETIVISGLSKET 457 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + V L D+P G LF+ +E E E ++FITP ++ + Sbjct: 458 LSDTERGVMGLRDLPGLGWLFKSREQEQEMEEFLIFITPTILEPQ 502 >UniRef50_P31772 Competence protein E n=35 Tax=Pasteurellaceae RepID=COME_HAEIN Length = 445 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 154/434 (35%), Positives = 243/434 (55%), Gaps = 29/434 (6%) Query: 1 MKQWI----AALLLMLIPGVQAAKP----QKVTLMVDDVPVAQVLQALAEQEKLNLVVSP 52 MK++ L+ +P + A P ++ + + P+AQ L+ LA Q+ +NLV+ Sbjct: 1 MKKYFLKCGYFLVCFCLPLIVFANPKTDNERFFIRLSQAPLAQTLEQLAFQQDVNLVIGD 60 Query: 53 DVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQ 112 + +SL L ++ + LQ + KS L ++ I ++ + + + Sbjct: 61 ILENKISLKLNNIDMPRLLQIIAKSKHLTLNKDDGIYYLN-----GSQSGKGQVAGNLTT 115 Query: 113 ANLPLENRSITLQYADAGELAKAGEK----LLSAKGSMTVDKRTNRLLLRDNKTALSALE 168 L + ++ L +A A EL K+ LLS GS+T D R+N L+++D ++ ++ Sbjct: 116 NEPHLVSHTVKLHFAKASELMKSLTTGSGSLLSPAGSITFDDRSNLLVIQDEPRSVQNIK 175 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDL----- 223 + +A+MD P+ Q+ + A IVTI ++SL+ELGV+W + + + G+ Sbjct: 176 KLIAEMDKPIEQIAIEARIVTITDESLKELGVRWGIFNPTENARRVAGSLTGNSFENIAD 235 Query: 224 -------SVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK 276 + T + + +INGRLLDLELSALE++ ++IIASPRLL ++ + ASIK Sbjct: 236 NLNVNFATTTTPAGSIALQVAKINGRLLDLELSALERENNVEIIASPRLLTTNKKSASIK 295 Query: 277 QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG 336 QG+EIPY VS+ + SVEF+EAVLG+EVTP + + I L L +SQN PG + Sbjct: 296 QGTEIPYIVSNTRNDTQSVEFREAVLGLEVTPHISKDNNILLDLLVSQNSPGSRVAYGQN 355 Query: 337 EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDE 396 EV++IDKQEI TQV K GET+ LGG+F +D VPLLGDIP +LF + + + Sbjct: 356 EVVSIDKQEINTQVFAKDGETIVLGGVFHDTITKSEDKVPLLGDIPVIKRLFSKESERHQ 415 Query: 397 RRELVVFITPRLVS 410 +RELV+F+TP ++ Sbjct: 416 KRELVIFVTPHILK 429 >UniRef50_B2K5T6 Type IV pilus secretin PilQ n=46 Tax=Enterobacteriaceae RepID=B2K5T6_YERPB Length = 500 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 187/399 (46%), Positives = 264/399 (66%), Gaps = 9/399 (2%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV 75 + VTL D PV+ +LQALA+ +LNL+ + V G +SL L +VPW+QAL ++ Sbjct: 106 PRTRSGGPVTLEFQDAPVSVILQALADYRQLNLITTTGVGGNLSLRLIEVPWEQALAIIL 165 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 + L +EG ++ V + R + A L N ++ LQYA+A ++A + Sbjct: 166 RMGRLKAEREGTVMMVFTEQEIQERQQRT----KQQAAPEALANLTLALQYANAEQVADS 221 Query: 136 GEKL----LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 + L LS GS+ DKRTN LL+RD +L+ L+ W+ +MDLP+ QV+LSAHIVTI+ Sbjct: 222 LDPLQGGLLSPLGSVVADKRTNTLLIRDTPASLALLKNWLIEMDLPLQQVQLSAHIVTIS 281 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 + L+ELGV+W + + + + ++ +L + + VGF++ RI GRLL+LELSAL Sbjct: 282 SEDLQELGVRWGMGEGKGNTAL-RINDFNVNLPLPNSAASVGFHVARIGGRLLELELSAL 340 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVL 311 EQ+ Q+DIIASPRL+ SH Q ASIKQGS+IPY VS G+ A ++EFKEAVLGMEVTP +L Sbjct: 341 EQENQVDIIASPRLITSHQQTASIKQGSDIPYTVSRGKKEAAAIEFKEAVLGMEVTPKIL 400 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 + G+I L L ISQN+PG +++ + E+L IDKQEI+TQV V GET+ LGGIF +K + Sbjct: 401 RNGKIILDLKISQNMPGITIKRGESEMLLIDKQEIKTQVTVNDGETIVLGGIFQQKKRQS 460 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + VPLL DIP G +FR D ++ RRELV+FITP+L+S Sbjct: 461 VNKVPLLADIPLLGAMFRQDTQQQSRRELVIFITPKLIS 499 >UniRef50_Q3SM90 Type IV pilus assembly protein PilQ n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SM90_THIDA Length = 745 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 121/457 (26%), Positives = 205/457 (44%), Gaps = 65/457 (14%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 +K++L +V V VLQ +A+ LN+V S V+G ++L L DVPW QAL ++++ Sbjct: 283 YSGEKLSLNFQNVEVRSVLQVIADFTGLNIVASDTVTGNLTLRLKDVPWDQALDLIMQTK 342 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-- 136 GL RQ GN++ + + + + PL I L Y A E Sbjct: 343 GLDKRQNGNVIWIAPRDELLAKEKLEFEAKKQVADLEPLVTDYIQLNYLRADEAQTMLYG 402 Query: 137 -----------------------------------------EKLLSAKGSMTVDKRTNRL 155 +K+L+ +G T + +TN L Sbjct: 403 FASGAFLNSAGNNAVNCSTQAQGLGGAAVAQAMQKGEGDTDQKVLTKRGRATYELKTNTL 462 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT--LADAQHAGGV 213 ++ D + ++ + +A++D+P QV + A +V + RELGV+ L A + Sbjct: 463 IITDTASKIAEVRGLLARLDVPARQVMIEARVVIADSLWSRELGVRLGTRLFKATGRDNI 522 Query: 214 GQVTTLGSDLSVATATTHVGF------NIGRINGRLLDLELSALEQK------------Q 255 G TL S+A T +G G++ L+A Sbjct: 523 GVGGTLNESASIAAGGTPTVTPQVELGTVGAAAGQIAMSLLNASNGNLLSLELSALEADN 582 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGR 315 + I+++PR++ S+ +PA I G++IP+ + +V FK+A L + V P +L Sbjct: 583 RGKILSNPRVMTSNQKPAVILNGTQIPFITPGTANSPATVTFKDAFLCLLVDPQILNNDA 642 Query: 316 IRLKLHISQNVPGQVLQQADGEV--LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 + + + + ++ ++ AI + I+TQV V +GETL LGGIF + + D Sbjct: 643 LIMTIEVQKDAIDTANAAVGADIIAPAIATRRIKTQVRVNNGETLVLGGIFDQTEFNNVD 702 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 VP LGD+P G LF+ K+D++ E++VFITPR++ Sbjct: 703 KVPFLGDVPGLGNLFKRTNKQDQKTEMIVFITPRILD 739 >UniRef50_C8X4Y6 Type IV pilus secretin PilQ n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4Y6_DESRD Length = 719 Score = 346 bits (889), Expect = 8e-94, Method: Composition-based stats. Identities = 119/416 (28%), Positives = 196/416 (47%), Gaps = 24/416 (5%) Query: 11 MLIPGV-QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ 69 L PG+ + + +++ + D V VL+ LA NL++ V G++SL L +VPW Q Sbjct: 312 PLFPGMDRNYSGETISIDLQDADVEHVLRLLASMADKNLIIDEGVQGSISLKLEEVPWDQ 371 Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIAR-------QEAEQARAQANLPLENRSI 122 AL V+ + L + GNI+ + R Q + Q PL+ I Sbjct: 372 ALDLVLLQSDLGMVERGNIIRIAPANTLAEERERIRQARQKALEAQQKIQELEPLQTEFI 431 Query: 123 TLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE 182 + Y A L ++ LS +G + D RTN L++ D + + + + ++D P QV Sbjct: 432 QINYTTASALRPQLQEFLSERGRIGQDARTNTLIVSDTRDNIRKVRSVIDRLDRPEPQVL 491 Query: 183 LSAHIVTINEKSLRELGVKWTLADAQHAGGVGQ-----VTTLGSDLSVATATTHVGFNIG 237 + A IV + R LGV G VGQ + + +T ++ + Sbjct: 492 IEARIVYAKDAFKRSLGVSLAGEYYDDVGAVGQYEKSLSAGVLQGFTPEVSTVNMQGALD 551 Query: 238 RINGRL---LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 +I+G LD +L E K I+SPRL+ + Q A I QG +I S ESG T Sbjct: 552 KISGIDLFELDAQLKLGELKGVTKTISSPRLVTLNNQQAEISQGIKIA-NESESESGGTD 610 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 +E+ EA L + V P + ++ L L I+ + P + + I+ + T++ V++ Sbjct: 611 IEYTEATLKLAVQPQITPDDKVILDLDIADDSPTENGED-------IETRTARTKLLVEN 663 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 ET+ LGG++ + ++ VP LGD+P G LF+ D +E REL++FI P ++ Sbjct: 664 QETVVLGGVYQVIENNEKNQVPGLGDVPLLGWLFKTDNVNNENRELLIFIRPTILE 719 >UniRef50_Q14H71 Type IV pilin multimeric outer membrane protein n=19 Tax=Francisella RepID=Q14H71_FRAT1 Length = 594 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 124/414 (29%), Positives = 201/414 (48%), Gaps = 24/414 (5%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 + +++ D PV VLQ L+E LNLVVS V G +S+ L +VPW + + V+ S GL Sbjct: 178 NEPISISFKDAPVQTVLQVLSEFAGLNLVVSSSVHGNISIDLKNVPWNEVMNIVLVSKGL 237 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL- 139 T++ +IL V + A + + + N L I L Y A + Sbjct: 238 ATKKMSSILYVATAAEIAAQEQLELQTKRSLENNATLVTEFIPLNYTTAQAAQTVITSMA 297 Query: 140 ------LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 +S +GS+T D RTN L++ D + L +++ V ++D+P QV + A IV + Sbjct: 298 KQNGGIMSPRGSITADARTNTLIVTDTEEKLPRIKEVVNEIDIPNDQVLIEARIVEVLRT 357 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSV-------------ATATTHVGFNIGRIN 240 S ELG + + D +G T + T Sbjct: 358 SALELGFNYGVVDPSGRVNIGLDTFNSNPNPAPGPTPGPTPTPVDTFVGTTAKLAYTIAG 417 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 G L++E+ ALE + + +ASP L+ ++ Q A IK G ++PY ++ A F+EA Sbjct: 418 GVRLEMEVRALESESLAEEVASPHLVVANNQVAFIKDGEDVPYNQATASGAAAV-AFQEA 476 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQV---LQQADGEVLAIDKQEIETQVEVKSGET 357 VL ++VTP + G I + + +++N G Q I K+EI T+V K G+T Sbjct: 477 VLELQVTPQIAPDGNIIMDILVTKNSVGASPGKTPQGGDLPPIIKKREITTKVMTKDGDT 536 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + +GGI+ + K ++ +P LGDIP+ G LF + D+ EL++FITP+++ S Sbjct: 537 VVIGGIYQKTQKEERNKIPFLGDIPYLGYLFSYTKITDQDSELLIFITPKIIES 590 >UniRef50_C0GNC2 Type IV pilus secretin PilQ n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNC2_9DELT Length = 569 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 19/407 (4%) Query: 12 LIPGVQA-AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 L PG++ + V++ + + V VL+ + + NL++ +V G +SL L +VPW QA Sbjct: 171 LFPGMREEYTGEPVSIDLQNAEVEHVLRLITHHTEYNLILDEEVQGKISLRLREVPWDQA 230 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQ-------EAEQARAQANLPLENRSIT 123 L V+ L ++GNI+ V + R+ +Q + PL+ R I Sbjct: 231 LDLVLAQKDLGMVRKGNIIRVTTADRLEAEEERRRRSRQAELEDQESLRKLEPLQQRFIQ 290 Query: 124 LQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 + YA A EL E LS +G +T D RTN L++RD + L + Q + +D P QV + Sbjct: 291 INYARADELQPRIEDFLSERGRVTQDARTNTLIVRDTPSQLEEITQLIDNLDRPERQVLI 350 Query: 184 SAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRL 243 A +V E RELGV W A ++ + +G Sbjct: 351 EARVVYATESFRRELGVDWGFAYQSPGLDSNIISPDTFNFPSDLEGLLGVGYMGHEGQSF 410 Query: 244 --LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAV 301 L+ L E + + + I++P+++ + Q A I+QG+++ V + T E+ A Sbjct: 411 SVLEARLRLGESQGKSNTISAPQIMTLNNQEAKIEQGTDVAVDVIDADL-RTRREYVPAT 469 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 L + VTP + + L L +S N PG+ I+ ++ ET + + GET+ +G Sbjct: 470 LELIVTPQITPDNNLILNLEVSDNAPGEGGN--------IEVKKAETTLFAEDGETIVIG 521 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 GI + +P L +P G LF+H+ E+ EL++FI P++ Sbjct: 522 GIKKLSESQRETGIPPLSRLPILGWLFKHELVEENMDELLIFIRPKI 568 >UniRef50_D0SET7 Type IV pilus biogenesis and competence protein pilQ n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SET7_ACIJO Length = 390 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 123/389 (31%), Positives = 203/389 (52%), Gaps = 30/389 (7%) Query: 48 LVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAE 107 +V S V G ++L L DVPW QAL ++K+ L R+ GN++ + +A + + Sbjct: 1 MVASDTVQGNITLRLKDVPWDQALDIIMKTKNLDKRRNGNVIWIAPVAELIKSEEEEAKA 60 Query: 108 QARAQANLPLENRSITLQYADAGELAKAGE----------------------KLLSAKGS 145 A++ P++ I L YA + ++ K E LLSA+GS Sbjct: 61 IAQSIKLSPIQTDYIQLSYAKSADVLKLLEDSRDSKGGESNRTAGSDSLALESLLSARGS 120 Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 D RTN L++ D + + + + + +D+ V QV + A IVT + RELG+KW+ Sbjct: 121 AVSDSRTNTLIINDRQQNIDKIRRMIDLLDVAVKQVMVEARIVTASTDFSRELGIKWSAK 180 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHVG---FNIGRINGRLLDLELSALEQKQQLDIIAS 262 ++ G DL V AT G F + +I+ +L+LELSAL+ +++++ Sbjct: 181 KLGNSPVWGGDFQPSFDLGVDLATNTAGTFNFGLLKISDYMLNLELSALQADGHGEVLSA 240 Query: 263 PRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHI 322 P++L Q A I +G+EIPYQ S G + EF+ A L +EVTP++ G++++ L I Sbjct: 241 PKVLTGDKQKAYILRGTEIPYQTWSATEGLKT-EFRAANLKLEVTPSITPDGKVQMALKI 299 Query: 323 SQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIP 382 ++ G + I+ E+ET V V GET+ LGGIF ++ + VP GD+P Sbjct: 300 EKDTVGTLTSAG----YLINTNELETNVLVDDGETVVLGGIFDDIKQNQYEKVPFFGDLP 355 Query: 383 WFGQLFRHDGKEDERRELVVFITPRLVSS 411 G LF+++ + + EL++F+TPR+V+ Sbjct: 356 VVGALFKNNTRSSAQTELLIFVTPRIVND 384 >UniRef50_C0QLC9 PilQ n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLC9_DESAH Length = 727 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 114/406 (28%), Positives = 197/406 (48%), Gaps = 18/406 (4%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHL-TDVPWKQALQTVV 75 + +K+ L + + V + L N V DV+G+V++ L VPW Q V+ Sbjct: 326 KVYTGEKIRLDFYETDIKNVFRILQSVSGKNFAVDKDVTGSVTISLDKPVPWDQVFDLVL 385 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQE-------AEQARAQANLPLENRSITLQYAD 128 K L QEG+I+ + +++ +++ A + ++ PL I + Y+ Sbjct: 386 KMNRLGQIQEGSIVRIATLSTLAQEQKQKQDAITAHKATLEQRKSLEPLVTEYIPINYSS 445 Query: 129 AG-ELAKAGEKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 A ++ EK+L+ +G ++VD RTN ++L D + + ++ + ++D Q+ +SA Sbjct: 446 AETDVKPHLEKILTPDRGVLSVDSRTNMIILTDVREKIDQAKELIHRLDKVTPQIMISAR 505 Query: 187 IVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDL 246 +V +N+ + LG+ W+++ G + + + F+ LD Sbjct: 506 VVEVNKNFSKSLGIDWSVSKNNANSGFDVIMNYPV---ASDGSLGFDFSRIFGTELALDA 562 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEV 306 LSA E K + II+SP++L + A IKQG E Y +SG +SV FK L +EV Sbjct: 563 TLSASEIKGDVKIISSPKILTLDNKKAKIKQGLEYAYL-ERDDSGGSSVLFKNIDLLLEV 621 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 TP V RI + + I++N V+ V ++ E ET++ V G T+ +GGI Sbjct: 622 TPHVTPDNRIGMSVLITKNDLASVV----DGVPSLSTNEAETELLVNDGNTIVIGGIVKN 677 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + + + P L +IP G+LF D ED + EL++FITP +V E Sbjct: 678 TSSTSETGFPGLSNIPLLGKLFGSDSTEDTKNELLIFITPTIVQLE 723 >UniRef50_A4BAN5 Type 4 fimbrial biogenesis protein PilQ n=1 Tax=Reinekea blandensis MED297 RepID=A4BAN5_9GAMM Length = 709 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 126/444 (28%), Positives = 200/444 (45%), Gaps = 62/444 (13%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKS 77 +K++L D+ V VLQ +A NLV S +SGT++L L +VPW QAL+ V+K+ Sbjct: 273 PYTGEKLSLNFQDIEVRDVLQIIANYIGFNLVASDSISGTITLRLNNVPWDQALELVLKT 332 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 GL RQ GN+L V A + + +A+ PL + + YA A ++A Sbjct: 333 NGLDKRQTGNVLLVAPAAELAEQERLELEAREQAEKLAPLRTEYVQVNYARAADIASILR 392 Query: 138 --------------------------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 LS++GS++VD+RTN L++ D L + + Sbjct: 393 SSSSAAAAAANVGDESGGVNSLPSSGGFLSSRGSVSVDERTNTLIITDTSVNLDGIRSAI 452 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA------------------------DA 207 + D+PV QV + A IV+ +LGV+W A Sbjct: 453 SFFDVPVEQVLIEARIVSARTSVGDQLGVRWGGAIFPSQNVFATGTVESSASIESDIYGG 512 Query: 208 QHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLA 267 + +L + + N LDLE+SALE + ++++ P+++ Sbjct: 513 SPNPDLTFPDAFAVNLPATGNASSFAVGLIADNLLDLDLEISALESLGEAEVVSQPKIVT 572 Query: 268 SHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVP 327 S Q ASI G + + G + +F EA L + VTP V ++ L L ++Q+ Sbjct: 573 SDGQAASIFSGQNVAFPAEDGGT-----QFIEAGLNLNVTPQVTPDDKVILTLTVNQDSL 627 Query: 328 GQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQL 387 AID + TQV V++G TL LGG++ + + P+LGD+P G L Sbjct: 628 AAGGG-------AIDTNTVSTQVLVENGVTLVLGGVYRTEKTQLVEKAPILGDLPVVGNL 680 Query: 388 FRHDGKEDERRELVVFITPRLVSS 411 F+ DER EL++FITP+L+ + Sbjct: 681 FKRTTTSDERSELLIFITPKLIQN 704 >UniRef50_B5YJ50 PilQ n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJ50_THEYD Length = 663 Score = 343 bits (881), Expect = 7e-93, Method: Composition-based stats. Identities = 112/417 (26%), Positives = 205/417 (49%), Gaps = 26/417 (6%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + + ++L + D + V + L + N+V+ PDV G V+L L +VPW+QA+ + K+ Sbjct: 245 EEKTISLDLQDADIVGVFRLLGDIGGYNIVIHPDVKGKVTLKLINVPWQQAVDVICKTFQ 304 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE-- 137 L EGNI+ + + + + + + R L+YA ++ E Sbjct: 305 LEKTFEGNIIRIAPVKIFQEEKKLEAETKDLFKKAEDEQIRIFVLKYASVDKVKGTIEAA 364 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 K+LS KG+++ D+RT +++RD + L + + VA +D P Q+ L A I+ ++ + Sbjct: 365 KILSPKGTISTDERTRTVIIRDIPSVLGHIARLVADLDKPTRQILLEARIIEMSSSFSKS 424 Query: 198 LGVKWTLA------------------DAQHAGGVGQVTTLGSDLSVATA---TTHVGFNI 236 LG +W + + + G L +L +T + F I Sbjct: 425 LGFEWGIQWYPPGTRTTIVGSVGAAAGSSASSVPGGTAPLAINLPASTGNVTSPTTAFTI 484 Query: 237 GRINGR---LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 G +N LDL +SAL+Q + +I++P+++ Q A I QG+ IPY +SG Sbjct: 485 GYLNPSQTIALDLRISALQQSGKGKVISNPKVITLDNQKAKIVQGASIPYGEKDVQSGQI 544 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 S +FK+ + +E TP ++ + L + + + + + K E T+V +K Sbjct: 545 STKFKDVAITVEATPHLIDDKSMLLDVSVIKEDLVEFVNIGGVYAPRTTKIEGNTKVSLK 604 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 GETL +GGI+ + + + VP LGD+P G+LF+ G+++ E+++F+TPR++ Sbjct: 605 DGETLVIGGIYKKTDSLTESKVPGLGDVPLLGELFKSRGRDETLYEVMIFVTPRILK 661 >UniRef50_A1AMQ3 Type IV pilus secretin PilQ n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMQ3_PELPD Length = 864 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 117/413 (28%), Positives = 196/413 (47%), Gaps = 33/413 (7%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + +KVTL D V ++ Q L+E N V+ DV+GT+S+ L +VPW QAL + Sbjct: 463 SAKEYWGRKVTLEFADAEVRKIFQLLSEVSNKNFVLGDDVTGTISIKLVNVPWDQALDII 522 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK 134 + + L TR+ GN+L++ + +Q ++ Y+DA + Sbjct: 523 LDAKDLETREIGNVLTIKKRGAFKEQLVKQTTY-----------TEYFSVNYSDAKSIKP 571 Query: 135 AGEKLLSAK------GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 E LL ++T D RTN +++ ++ + + + +MD+P QV + A IV Sbjct: 572 QLEALLDPVLLKEKLATITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQVMIEARIV 631 Query: 189 TINEKSLRELGVKWTLADAQHAGGV-----------GQVTTLGSDLSVATATTHVGFNIG 237 R LGV W + +G + G T + + +A ++G + G Sbjct: 632 EATSTFTRSLGVNWGVHYTDASGSLLGITQLDTGFGGITTAPPTSGTGDSAGGNMGISFG 691 Query: 238 RINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVE 296 + + LD+ LSA + II+ P++ + + A I QG +IPY S G++ T + Sbjct: 692 ALGNGVQLDMRLSAAATAGLIKIISCPKVATLNNKKAKIAQGQQIPYTASDGDNVET--K 749 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 F EA L +EVTP + G I + + + G + AI+ +E T++ ++ GE Sbjct: 750 FVEAALSLEVTPHINANGTISMNIVAKNDSMGDAV--GSSTAPAINTKEATTEMLLRDGE 807 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 T +GGIF + VP L DIP G+ F+ + K + EL+VFITPR++ Sbjct: 808 TTVIGGIFVDTDNDSDAGVPFLMDIPAIGKFFKTNSKTKTKTELLVFITPRIM 860 >UniRef50_C7LN99 Type IV pilus secretin PilQ n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LN99_DESBD Length = 693 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 117/416 (28%), Positives = 202/416 (48%), Gaps = 26/416 (6%) Query: 12 LIPGVQA-AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 L PG++ +++++ + D V VL+ ++E NL++ D+SG +SL L D+PW QA Sbjct: 286 LFPGMKERYTGERISIDLQDADVEHVLRLISEISGYNLILDDDISGKISLKLVDIPWDQA 345 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARA-------QANLPLENRSIT 123 L V+ GL +GNI+ + S + + + A Q PL+ + Sbjct: 346 LDLVLLQRGLGMVIKGNIMRIASTTKLEAERVQLQKAREAAIQAQVSMQNLAPLKTEYMQ 405 Query: 124 LQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 + Y A E + +L+ +GS++ D RTN L++ D + L ++ ++ ++D QV + Sbjct: 406 INYNTAAEFEGKVKTMLTGRGSVSSDPRTNILIVTDTEDTLKRVDSFIKKLDRAERQVMI 465 Query: 184 SAHIVTINEKSLRELGVKWTLADAQHAGGV-------GQVTTLGSDLSVATATTHVGFNI 236 A +V ++ R LGVKW + A G + G + +G I Sbjct: 466 EARLVYATDEFQRSLGVKWGTSYATETAANLPSEQWRGTFASTGLNAINTVNGITLGGTI 525 Query: 237 GRINGRL---LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 G+ G LD L E + I+SPR+L + A I+QG+++ S ESG T Sbjct: 526 GKFLGEDLFALDAALQLGEANNLVKTISSPRILTLNNNRAEIQQGTKLATATES-ESGGT 584 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 + E++EAVL + V P + ++ L L IS + P + ID ++ +T++ V Sbjct: 585 TTEYEEAVLKISVLPQITPDNKLILDLEISDDSPKSDGRD-------IDTKQTKTKMMVS 637 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 ET+ +GG+ S + +P LGD+P G LF++ + EL++FI PR++ Sbjct: 638 DRETIVIGGVQKTTETSNTNQIPGLGDVPGLGWLFKNTYDAKSKAELLIFIQPRIM 693 >UniRef50_A8ZYV5 Type II and III secretion system protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYV5_DESOH Length = 538 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 103/434 (23%), Positives = 202/434 (46%), Gaps = 39/434 (8%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 + G++ VT+ + D +A +L+AL + N+++ VSG +++ VPWK+A Sbjct: 88 LIGLEELPDTPVTIHMTDTDIAVILRALTKAAGKNIIIGAGVSGRANINAEGVPWKEAFA 147 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 ++++ GL + G+ L + ++A + A + A R Q + L+Y++A ++ Sbjct: 148 GLLRTHGLTYNRIGDTLRIKTLADIQQDFAIENAY--RKQQGERSVTQVFFLKYSEAADV 205 Query: 133 AKAGEKLLS----------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE 182 A + + + A+ S+ VDKR N +++ + + Q+D P QV Sbjct: 206 ANLLKPVTARAASAEGVKEAQQSVVVDKRNNAVIVHTPLPGIEQCAALIRQIDRPTRQVL 265 Query: 183 LSAHIVTINEKSLRELGVKWTLADAQ---------------------HAGGVGQVTTLGS 221 + AHIV ++ + R+LG++W + V T Sbjct: 266 IEAHIVETSKDTARQLGIQWGGVAKDKQHSWFTGATEGPAGQTLFDANGVPVAANPTGNW 325 Query: 222 DLSVATATTHVGFNIGRI----NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 + + + G ++G I L+ +L+ALE+ +L+I++SP + A I+ Sbjct: 326 AANFPASLGNTGLSLGYIYQDLGQSLIAAQLTALEEDGKLNILSSPSITTLDNSAAVIES 385 Query: 278 GSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE 337 G ++P+Q E ++E+K+AVL + VTP ++ +R+K+ ++ Sbjct: 386 GRDVPFQTV--EDNEVNIEWKKAVLSLAVTPHIIDASTLRVKIKTHKDELDWSNAVLTDG 443 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 I + ET++ + G+T +GG+ + + Q VPLLG IP G FR + ++ Sbjct: 444 NPTIITKNAETEMILFDGQTTVIGGLNKQSSSQSQFGVPLLGRIPILGFFFRSTSRSNDM 503 Query: 398 RELVVFITPRLVSS 411 E+++FITP ++ Sbjct: 504 EEVLIFITPHILEP 517 >UniRef50_Q5QV49 Type II secretory pathway, component PulJ n=2 Tax=Idiomarina RepID=Q5QV49_IDILO Length = 427 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 141/396 (35%), Positives = 227/396 (57%), Gaps = 22/396 (5%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 Q V+L +P+ ++Q LA+Q +LN++++ +V G SL L V W+ A T++ S L Sbjct: 43 QPVSLNTRKMPLRDLIQLLADQHQLNILMTDNVKGESSLKLNGVAWQDAFATLIASHDLA 102 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG----E 137 R +G++L + + + + +++ +A A +LAK + Sbjct: 103 IRLQGSMLRI-------------DVAGEHTTDSNEYHSILLSVNFAKASDLAKLLKNEQQ 149 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 LS G+++VD RTN L+LRD L+ + Q V +D+PV QV + A +VT+ +E Sbjct: 150 SFLSPNGAVSVDARTNTLILRDTPEQLATIRQLVNDLDVPVKQVLIEARMVTVKANVSKE 209 Query: 198 LGVKWTLADAQHA---GGVGQVTTLGSDLSVATATTHVGFNIGRINGR-LLDLELSALEQ 253 LG++W +++ A V + DL A N+ R++ LLDLEL+ALEQ Sbjct: 210 LGIRWGVSEYGLAIPEDAGSFVKGMQVDLPTAAPAGTFSANLARLSDDILLDLELTALEQ 269 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQK 313 + + +II SP++ S+ QPA I+QG+EIPY V + GAT+V+FK+AV+G+ VTP + Sbjct: 270 ENKAEIITSPKIFTSNQQPAYIEQGTEIPY-VETAAHGATAVQFKKAVMGLSVTPQITPN 328 Query: 314 GRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 + ++L I+QN G + G +AID QE+ T+V K+GET+ LGGIF N + Sbjct: 329 NHVLMELTITQNTRGDTVATPTGPAVAIDTQEMSTRVLAKNGETIVLGGIFQEHNLNDDS 388 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 VP+LG +P G+LF H + DE+REL++F+TP ++ Sbjct: 389 RVPILGSLPLIGKLFSHQQQRDEKRELMIFVTPTIL 424 >UniRef50_C8R2F0 Type II and III secretion system protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2F0_9DELT Length = 514 Score = 336 bits (863), Expect = 8e-91, Method: Composition-based stats. Identities = 119/404 (29%), Positives = 217/404 (53%), Gaps = 19/404 (4%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 ++ + DVP+ +++LA + N++++P V+G V++H+ VPW ++++S GL+ Sbjct: 99 PTSINLVDVPIGTAMRSLARVAQQNIIINPSVTGNVNIHVEQVPWNDVFMSIIESYGLVA 158 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS- 141 EG ++ V S+ + RQ + PL+ R + +++++ LA++ +LS Sbjct: 159 VVEGGVIRVMSVEDLRRQVERQGLY-LEEEHVSPLQTRVVPVRFSEPASLAESLTPMLSR 217 Query: 142 -----AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 +GS+TVD+ T L++RD L L ++ ++D QV + AHI+ N++ R Sbjct: 218 DKEGNPRGSVTVDRHTRSLVIRDTAENLERLTSFLQEVDQATPQVLIEAHIIETNQEVAR 277 Query: 197 ELGVKWT--------LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL 248 ELGV+W ++DA +G S+ T VGF + G +L+++L Sbjct: 278 ELGVQWGSFWRGQQRVSDAAGGFTYQAGNPIGEQYSLDVLTGEVGFYTASVAGNILEMQL 337 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTP 308 AL+++ +++I++ P + A ++ G+E+PYQ S E G TSV++K+AVL + VTP Sbjct: 338 QALQREGKVNILSRPSVATLDNHEAVLESGTEVPYQ--SIEDGTTSVQYKDAVLRLLVTP 395 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 V+ + I+LK+ ++ I K+ +T + V+ G T+ + G+ + Sbjct: 396 QVISRENIKLKIEAQKDEVDLTRTVMGN--PFIIKKLAQTNLIVEDGSTVVIAGLAKERQ 453 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 S VPLL +IP G FR D + E EL++FITPR++S++ Sbjct: 454 ASSSTGVPLLKNIPGLGVFFRSDARAGEFEELLIFITPRILSAD 497 >UniRef50_Q0EXA5 Probable pilQ; fimbrial type-4 assembly signal peptide protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXA5_9PROT Length = 793 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 122/442 (27%), Positives = 209/442 (47%), Gaps = 50/442 (11%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + QKVT D+ + L+ +AE N+++S DV G +++ L DVPW QAL ++ Sbjct: 352 KVYTGQKVTFNYKDIDIRNALKLIAEMSDFNIIMSDDVKGVLTMRLIDVPWDQALDLILS 411 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + GL Q GN++ + +A + ++ + + PLE ITL YA ++ Sbjct: 412 ARGLGKEQNGNVVRIAPLAVLKADANARKEAKQSVEDVAPLETEFITLGYASVNDVKTIL 471 Query: 137 EK----------------------------------LLSAKGSMTVDKRTNRLLLRDNKT 162 E LLS +G + +D+R+N +++ D + Sbjct: 472 EGGSVKTEVTSAGGAAGGTTGANGTGQTVSSSSELKLLSERGVIMLDERSNTMIITDTRE 531 Query: 163 ALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD 222 L+ +++ +A +D P+ QV + A IV + R+LGVKW + GG T + Sbjct: 532 RLNNIKRLIAVIDKPMQQVMVEARIVEATDTFSRDLGVKWGGTLNSNGGGYTHTVTGAAS 591 Query: 223 LSVATATTHVGFNIGRINGRLLDLEL-----------SALEQKQQLDIIASPRLLASHLQ 271 G L SA E + Q+ +++SPR+ S+LQ Sbjct: 592 APQNVVDLGAAVKAGAGGAIGYTLGTLNNALNLNLELSAAEAEGQIKVVSSPRVFTSNLQ 651 Query: 272 PASIKQGSEIPYQVSSGESG-ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV 330 A I+Q +IP+QV++ + S + K A L ++VTP + RI ++L ++++ P Sbjct: 652 EALIEQDQQIPFQVTTASTPPVVSYQLKSAKLTLKVTPQITADKRIIMQLVVNKDTP--- 708 Query: 331 LQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRH 390 IDK++I T++ VK+GET+ LGGI+T+ + VP L +IP+ G F+ Sbjct: 709 -VANTVGPPTIDKKQIMTKLLVKNGETMVLGGIYTQTTSDQVNGVPGLQNIPFIGNFFKR 767 Query: 391 DGKEDERRELVVFITPRLVSSE 412 K R EL++FITP +++ + Sbjct: 768 KQKVRNRNELLIFITPTIIADD 789 >UniRef50_A5WCG3 Type IV pilus secretin PilQ n=2 Tax=Bacteria RepID=A5WCG3_PSYWF Length = 642 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 127/470 (27%), Positives = 231/470 (49%), Gaps = 83/470 (17%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 + +++ V V VL L++ N+V + V+G++ L+L +VPW QAL ++ S Sbjct: 176 YSGKPISVDFQQVEVRSVLHLLSQFTDTNIVATDQVTGSLMLNLVNVPWDQALDIILTSQ 235 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-- 136 L + +GN++ V +A A+Q A + ++QA +PL + I L YA A +L Sbjct: 236 QLGKQTQGNVILVAPLAQMAKQRAQQLAIEQQSQALMPLRSEYIRLNYAKAEDLQALIIK 295 Query: 137 ----------------------------------------EKLLSAKGSMTVDKRTNRLL 156 +LLS++G + VD RTN L+ Sbjct: 296 ASGSPTPTPVAMQHLPASTAVANAPSALPAVVTRLNLPVSSRLLSSRGVIAVDARTNTLI 355 Query: 157 LRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLAD---------- 206 ++D +LS + + Q+D+PV QV + +V+ + +E+GVKW L Sbjct: 356 IKDTADSLSNIHALIKQIDIPVRQVMIEVRMVSATDNFSKEMGVKWGLLSKGVAHNDDLL 415 Query: 207 --------------------------AQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 ++ + + L DL ++ + F + ++ Sbjct: 416 VGASDQTLADLKSFSAPNTAYKGRNKSRAGYAITRPDNLNVDLGISNPAGRIAFGLLSMS 475 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 ++DLELSA++ + + ++I++P++L Q A++ G++IPYQ S E G T+ +F+EA Sbjct: 476 DLMIDLELSAMQAEGRGEVISTPKILTLDKQTATVSSGTKIPYQSES-EGGGTTTQFEEA 534 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 +L ++VTP++ + +I L+L+I P V V+ ID + T+V V G+TL L Sbjct: 535 LLSLQVTPSITPEDKISLQLNIENGRPNPV----GNGVILIDTDRLITRVTVGDGQTLVL 590 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 GGI+ + + VP GD+P+ G+LF+ D + ++++EL++F+TP+L+ Sbjct: 591 GGIYRNQIFNNTQKVPFFGDLPYIGRLFKQDLRRNDQQELLIFVTPKLMQ 640 >UniRef50_A1HM79 Type II and III secretion system protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HM79_9FIRM Length = 414 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 105/401 (26%), Positives = 180/401 (44%), Gaps = 22/401 (5%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 + A V + V D V VL ALA ++++V V+G +++ L ++P++ AL Sbjct: 33 VMPPALAAGPMVNMNVTDAEVRDVLTALASVGRVSIVADDSVTGKITIQLRNIPFETALD 92 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 V K+ GL + GN++ V S + + I L+YA A E+ Sbjct: 93 LVTKTKGLTYYKTGNVIVVASADKLSKGFG---------------SVQIIKLKYARADEV 137 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 K+ L+ + VD+ TN L+ + AL Q +A++D+P QV L A +V IN Sbjct: 138 KKSL-ALVIPDERLKVDEATNSLVFSGSPAESEALRQALAELDVPYEQVSLEAQVVAINR 196 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI-GRINGRLLDLELSAL 251 + ++LG W + + G G +LSAL Sbjct: 197 NAAKDLGFDWQWSGLPANTEFDSTSGTTKTTREYPGVIKFGKAYDGTPYEFTFQAKLSAL 256 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG--ATSVEFKEAVLGMEVTPT 309 + ++A P++ + + A I G IP V E+G T++E+ +A + + TP Sbjct: 257 ITSGEAKLLAKPKITTINGKEAKILIGDRIPVLVERTENGKTTTTIEYIDAGIKLTYTPR 316 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 + G I +H + P V + + + +E T V +K G+T+ +GG+ + + Sbjct: 317 INADGYITAAVHTEVSTPTLVPEM---KAYRVTTREATTNVRMKDGDTMVIGGLISNEES 373 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 G++ VPLL D+P G+LF K E+V+F+T R+V Sbjct: 374 GGKNRVPLLSDLPVLGKLFESVHKTKNETEVVIFLTARIVK 414 >UniRef50_A7JQ17 Competence protein E n=3 Tax=Pasteurellaceae RepID=A7JQ17_PASHA Length = 437 Score = 330 bits (846), Expect = 7e-89, Method: Composition-based stats. Identities = 142/427 (33%), Positives = 228/427 (53%), Gaps = 23/427 (5%) Query: 6 AALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDV 65 + + + G A +++++ + P + + LAE+ N+V+ ++ +L L + Sbjct: 2 WRIFIYFLCGFSLAYANTISIVLKNAPTSLIFTYLAEETGKNMVLDDNIETKSTLRLENK 61 Query: 66 PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP-------LE 118 + +T+ K L QE +I+ +H + ++ + L Sbjct: 62 SVDEIFKTLGKVNKLSLTQEDDIVYIHKKEEKAADLTPLPIMNLQNNGQNTPLVTAPKLI 121 Query: 119 NRSITLQYADAGELAKAGE----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 +++ L YA A E+ ++ LS G + D+R+N L+++D+ +L +E V Q+ Sbjct: 122 TKTLKLHYAKASEVIESLTKGSGTFLSENGYIHFDERSNSLIVKDSAKSLKNIENLVKQL 181 Query: 175 DLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHA----------GGVGQVTTLGSDLS 224 D P Q+ + A IVTI+ + L+ELGV+W + G+ VT + Sbjct: 182 DQPTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGHYKFGGRLEGNGLNNVTNNLNVNF 241 Query: 225 VATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ 284 T + IN R+LDLELSALEQ+ ++IIASPRLL ++ +PASIKQG+EIPY Sbjct: 242 PITGGASAVLQVSSINSRVLDLELSALEQENSVEIIASPRLLTTNKKPASIKQGTEIPYV 301 Query: 285 VSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 + + +S AT VEFKEAVLG+EV P + + +I L L ++QN P Q ++ IDKQ Sbjct: 302 MYNTKSEATDVEFKEAVLGLEVVPHLSTQNQILLDLIVTQNSPNS--QSGSSGLITIDKQ 359 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 E+ TQV K GET+ LGGIF + G+D VP+LG IP+ +LF + +RELV+F+ Sbjct: 360 ELNTQVFAKHGETIVLGGIFQHLTQKGEDKVPILGSIPFIKRLFSQTRDKISKRELVIFV 419 Query: 405 TPRLVSS 411 TP ++ S Sbjct: 420 TPYILQS 426 >UniRef50_Q1GYK8 Type II and III secretion system protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK8_METFK Length = 657 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 91/407 (22%), Positives = 182/407 (44%), Gaps = 33/407 (8%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWK 68 M P ++ A + V+L + D + V +AL+ +N ++ D+ ++ + P Sbjct: 170 MDPPKLKPAFNKPVSLELRDANIKMVFEALSRATGINFILDKDIKPETKATVFIKKSPVD 229 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 +A++ V+ + GL + +LS ++ N A+ + Q L R+ L A Sbjct: 230 EAIEMVLATNGL----QKKVLSENTALVFPNTAAKLKDYQ-------DLVIRNFYLTNAK 278 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 A +++ + +L K + D+R N +++RD + E+ VA DL +V L ++ Sbjct: 279 AKDVSTMIKTMLKTK-DVHTDERLNMIVIRDTPEVVRIAEKLVAANDLADPEVMLEIEVM 337 Query: 189 TINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL 248 ++ + L+ELG+ + + AG L D + + FN L Sbjct: 338 EVSRERLQELGIDYPTSLTASAG-------LSIDAMRSNNSGTYLFNSNP--------TL 382 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGME 305 + + ++I+A+PR+ + A + G ++P + +G + SV++ + L +E Sbjct: 383 NFRKTTGDINILANPRIRVRNNDKAQVLVGDKVPVITTVATAGVGSSQSVQYLDVGLKLE 442 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQ-QADGEVLAIDKQEIETQVEVKSGETLALGGIF 364 P + + +K+ + + G G V I + T + +K GET L G+ Sbjct: 443 AEPRITLDDFVNIKIALEVSSLGSSTTLNGGGVVYQIGTRNASTLLRLKDGETQILAGLI 502 Query: 365 TRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + +P LGDIP G+LF + ++ E+V+ ITP +V++ Sbjct: 503 NDEERRNTSRLPGLGDIPLLGRLFSNQTDNRKKTEIVLAITPHVVNN 549 >UniRef50_C6XCK3 Type II and III secretion system protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCK3_METSD Length = 675 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 84/412 (20%), Positives = 179/412 (43%), Gaps = 26/412 (6%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQAL 71 P ++ + V+L D + V +AL+ +N ++ D+ ++++ + A+ Sbjct: 176 PRLKPPFQKPVSLEFRDANIKMVFEALSRATGINFILDKDIRADAKATVYIRKASIEDAI 235 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 + V+ + GL + L+ S N + + + L RS L A A + Sbjct: 236 EMVLATNGL----QKKALTETSALIFPNTPQKVKDYK-------ELMIRSFYLTNASAKQ 284 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +A + +L K + VD+R N +++RD + E+ VA DL +V L ++ I+ Sbjct: 285 VASTLKTVLKTK-DVVVDERLNMIVMRDTPEVIHIAEKLVAANDLADPEVMLEIEVLEIS 343 Query: 192 EKSLRELGV----KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDL- 246 L+ELG+ + ++ + + +VAT + + +N D+ Sbjct: 344 RSRLQELGIAYPNQISVNSRIPVTTSTAGSGIAVTSTVATDSPLTLEGLLNLNSSRFDVS 403 Query: 247 ---ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEA 300 ++ + +++I++PR+ + + A I G ++P ++ + + +V + + Sbjct: 404 PNPAVNFRKTTGDVNLISNPRIRVRNNEKAKILVGDKVPIITTTSTANVGISENVTYIDV 463 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQ-ADGEVLAIDKQEIETQVEVKSGETLA 359 L ++V P + + +K+ + + G V I + T + +K GE Sbjct: 464 GLKLDVEPRITLDDFVNIKIGLEVSSLGDRTTTRNGATVYTIGTRNASTLLRLKDGEMQI 523 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 L G+ + + +P LGDIP G+LF + + E+V+ ITPR++ + Sbjct: 524 LAGLIQDEERKNASKLPALGDIPILGRLFSNQEDRKNKTEIVLAITPRILGN 575 >UniRef50_B8FHA0 Type IV pilus secretin PilQ n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA0_DESAA Length = 844 Score = 327 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 117/438 (26%), Positives = 194/438 (44%), Gaps = 49/438 (11%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQTVVKS 77 +K+ L + V + L E LN + DV G V+L L VPW Q L V+K Sbjct: 409 YTGEKIALDFYKTDIKNVFRILKEVSGLNFAIDRDVEGEVTLTLEKPVPWDQVLHLVLKM 468 Query: 78 AGLITRQEGNILSVHSIA---------------------WQNNNIARQEAEQARAQANLP 116 L ++ +++ + + +Q + + QA P Sbjct: 469 NQLGMQKIKDVIRIAPQSVLDEEAAAERAREQANIDRIKTLTETKNQQMQNELQQQALEP 528 Query: 117 LENRSITLQYADAGELAKAGEKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + I + Y DA +L K E + S +GS+ VD RTN +++ D K + V+++D Sbjct: 529 MVTEFIPVNYTDASDLIKHVEAVKSPDRGSVDVDIRTNTIIMIDIKDRIKRARDIVSRLD 588 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATAT------ 229 QV++ A +V R +G+ W G + V T Sbjct: 589 RVTAQVQIEARVVEAQTTFSRSIGLAWNGESGIQPGDSREGVGPQRGYDVLGGTYGYNWS 648 Query: 230 ------------THVGFNIGRINGR---LLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 GFN R+ G L+ L+A E + ++ I++SP++ +PA+ Sbjct: 649 VNYPTETDDYGNNTFGFNFSRLLGLTPLSLNATLNAAESRGEIKIVSSPKIRTLDNKPAT 708 Query: 275 IKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 IKQG + P + G+ G T + +K L +EVTP V Q R+ +K+ + +N G V+ + Sbjct: 709 IKQGIDYPIKQFDGD-GNTVIVYKAVDLQLEVTPHVTQDRRVSMKMTVEKNDVGAVISEE 767 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 + + +E++T++ V G+T+ +GGI + D P L D+P G LF+ K Sbjct: 768 Q----SFNTKEVDTELLVNDGDTVVIGGIIKTTFRDDVDGWPGLIDVPVLGWLFKDSTKS 823 Query: 395 DERRELVVFITPRLVSSE 412 +ER EL+VFITP +V E Sbjct: 824 EEREELLVFITPTIVELE 841 >UniRef50_B5S3N0 Gspd-related protein n=4 Tax=Ralstonia solanacearum RepID=B5S3N0_RALSO Length = 754 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 181/404 (44%), Gaps = 27/404 (6%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQALQ 72 + AA + ++L D + QV + L+ LN V DV V++ L + + Sbjct: 176 ALSAAFRKPISLEFHDAQMRQVFEVLSRASGLNFVFDKDVRTDQKVTVFLRNSTVASVVN 235 Query: 73 TVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 TV+ + L R +GN + ++ + PL R+ L +DA + Sbjct: 236 TVLLTNQLEQRVLDGNAILIYPNTPAKQRDYQ------------PLTVRTFVLSNSDAKD 283 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +A + +L + + VD++ N +++RD A+ A E+ VA ++P +V L I+ + Sbjct: 284 VANTLKTILKTR-DIVVDEKRNMIVMRDTPDAIQAAEKLVAVHEMPEPEVMLEVEILEVK 342 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 L++LG++ + TL D T +G + L++ ++A Sbjct: 343 RSRLQDLGIQLPSQLSLTPLASSSGGTLTLDDLRHLNPTRIGATV-----SPLNVNVNAA 397 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGMEVTP 308 +++A+PR+ + + A I+ G +P ++ + A +V++ + L +EV P Sbjct: 398 VTDT--NVLANPRVRTRNKEKARIQVGQRVPNVTTTSTATGFVAENVQYVDVGLKLEVEP 455 Query: 309 TVLQKGRIRLKLHISQNVP-GQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 TV + +++++ + QV ++ I + T + +K GE L G+ + Sbjct: 456 TVTPDNEVTIRINLEVSDIISQVQTKSGSIAYEIGTRNATTLLRLKDGENQILAGLIQDE 515 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 ++ + VP LGDIP G+LF + E+V+ ITPR++ Sbjct: 516 DRVSGNRVPGLGDIPALGRLFGAQSDNKLKSEIVLSITPRVIRP 559 >UniRef50_Q3SIY3 Type II secretion system protein D n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIY3_THIDA Length = 656 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 95/411 (23%), Positives = 184/411 (44%), Gaps = 26/411 (6%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQALQT 73 + A + +TL D P+ V +A Q LN V DV +L + P +A+ Sbjct: 175 LGPAFHKPITLEFRDAPLRNVFDMIARQSGLNFVFDKDVRLDTKATLFARNTPIDEAVDM 234 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 ++ + L +++ +++ + +Q+A Q L +S L ADA Sbjct: 235 LLMTGQLSK----KVVNANTLLIYPDQPQKQKAYQ-------ELMVKSFYLGNADAKATM 283 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 L+ AK + VD+R N L++RD A+ E+ VA DL +V L ++ + Sbjct: 284 AMLRTLVKAK-DLHVDERLNLLVMRDTPDAIRLAERIVAVQDLAEPEVMLEVEVLEVKRG 342 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL----- 248 L +LG+++ + +T+G V T + ++ Sbjct: 343 RLLDLGIQYPTNFSLLNLPPATSSTIGPGGVVTNTTPPPSVLTVESLKNITASQIAISPT 402 Query: 249 ---SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT---SVEFKEAVL 302 +Q ++I+A+PR+ + + A I G ++P S+ S SV + + L Sbjct: 403 PGVDLRKQDSDVNILANPRIRVKNREKAKIHIGDKVPVITSNTTSTGVVSESVSYLDVGL 462 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALG 361 ++V P+VL + +++++ + + + ++ +G + I + T + +K GET L Sbjct: 463 KLDVEPSVLMREDVQIRVGLEVSNIVREIRSGNGTLTYQIGTRNAGTTLRLKDGETQVLA 522 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G+ + +++S +P LGD+P G+LF E + E+V+ ITPR++ S+ Sbjct: 523 GLISDEDRSTASRIPGLGDLPLIGRLFSSQRDERNKTEIVLLITPRVLRSD 573 >UniRef50_Q1IRM5 Type II and III secretion system protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM5_ACIBL Length = 808 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 112/422 (26%), Positives = 186/422 (44%), Gaps = 31/422 (7%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 + +++ + DV + + + E LN+V+ P V GTV+L L DVPW QAL V+++ Sbjct: 389 YTGEPISVNLKDVDLKDFFRLIHEISGLNVVLDPSVKGTVTLVLDDVPWDQALDIVLRNN 448 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 GL + +GN+L + SI + + + + L YA + +L +K Sbjct: 449 GLDRQLDGNVLRIASIETLRTEAVARRQQLEAQALAVDKVTVTRFLSYARSADLVPTLKK 508 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 LSA+G + D R N L++ D + +L++ ++Q+D +VE+ A +V +REL Sbjct: 509 FLSARGDIIADGRMNALVISDIPGVIPSLDRLISQLDRKTQEVEIEARVVAATRTFVREL 568 Query: 199 GVKW--------TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI----------- 239 G++ T G G T G Sbjct: 569 GIQLGGGWGGASTSVSGNPNAGFGSTNFKNPAGQPITGAPFPISTTGAFPLFTNFQVLNP 628 Query: 240 ----------NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 + LDL LSA EQ+ L I++ PR++ + A ++QG +P S Sbjct: 629 TAGLELINIGHSYGLDLYLSAAEQRGLLKILSRPRVVTQNNVTALVRQGFRLPVVTLSQL 688 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 +G +V + +A L + VTP + + I L + + P + Q+ TQ Sbjct: 689 NGPPTVTYVDAFLRLTVTPQITVENTIFLAVDVENTTPDFTRTVLGN--PILLTQQTTTQ 746 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V V G T+ +GG+ +N VP+LGDIP LF H + +EL+ FITP++V Sbjct: 747 VLVTDGGTVTIGGVVQTQNTLTSQEVPILGDIPILKYLFMHKTTNTQTQELIFFITPKIV 806 Query: 410 SS 411 + Sbjct: 807 QT 808 >UniRef50_B8FD61 Type II and III secretion system protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FD61_DESAA Length = 566 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 114/461 (24%), Positives = 208/461 (45%), Gaps = 68/461 (14%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 + + Q VT+ + D V VL+A+A NL+++ +VSG VS+ + VPW + Sbjct: 86 MAPERPLPSQPVTMRMKDSEVGVVLRAIARGVGQNLLINSNVSGRVSVEVKAVPWNEVFL 145 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQ------NNNIARQEAEQARAQANLPLENRSITLQY 126 +++ S GL EG+I+ + + R + ++ A++ PL + + + Y Sbjct: 146 SILNSQGLRYAWEGDIIRIMTAEDMEKDLAVQQVQERTKRQKLVAKSVEPLLMKVVQIDY 205 Query: 127 ADAGELAKAGEKLLSA-------------------KGSMTVDKRTNRLLLRDNKTALSAL 167 AD L + +L+ +GS+ VDK N L+L + L + Sbjct: 206 ADPEGLVEPLNSILATSAGENAASKSKNDKSGSVVRGSVDVDKHNNSLVLMAVREDLEKM 265 Query: 168 EQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL----------------------- 204 + ++D P QV + A+IV + R+LGV+W Sbjct: 266 LALINKLDRPPYQVHIKANIVETTRDTARDLGVQWGWMYGRYDSLGNDTDFWLTPGGNSG 325 Query: 205 ----------------ADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL 248 ++ G G D A T +G G++ +L+++L Sbjct: 326 SAASRDAPLTGGYTAGTGSKGVSGQGNGINFPVDFEDAMGAT-MGLMFGKVGSNILEVQL 384 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTP 308 SAL +++I+++P + Q AS + G+E+PY E G V+FK+A L +E+TP Sbjct: 385 SALADAGKINILSTPSITTLDNQTASTENGTEVPYVTI-NEDGDREVKFKDATLMLEITP 443 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 V+ +G++++K+ I ++ I K+ ET + V++GET+ + G+ +N Sbjct: 444 HVIDEGQMKMKVSIKKDEVDLSRNVDGN--PFILKKRTETSLIVRNGETVVISGLSKTRN 501 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G +P L DIP G LF+ + K + E+++F+TP ++ Sbjct: 502 TEGDTGIPWLKDIPGLGYLFKSESKSEAMEEVLIFLTPTVL 542 >UniRef50_C9RKD2 Type II and III secretion system protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD2_FIBSS Length = 487 Score = 324 bits (831), Expect = 4e-87, Method: Composition-based stats. Identities = 100/428 (23%), Positives = 195/428 (45%), Gaps = 23/428 (5%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 M A G A + ++ + ++++ ++++++PDV G +SL Sbjct: 13 MVASFATAWAAPAEGSVAPNKKLYDFNFVNMDYEAIFRSVSVIAGVDILIAPDVKGKISL 72 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 +T W++ L + L + +S+ ++ + E+ +A+ N PL + Sbjct: 73 RVTKKTWQETLDIICNMNDLTWVIQDKYISIQRLSTYQAKQKKLADEENQAEQNAPLVRK 132 Query: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 + + +A A EL K E + S +G ++V +RTN +++ D ++ + + + ++D+ Q Sbjct: 133 NFQVHHAKADELVKVLESMKSNRGKISVVERTNSIIVYDTESKIEQMGNALVELDVETLQ 192 Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGG-----------------VGQVTTLGSDL 223 + ++A +V +N + RELGV WT A G + + + Sbjct: 193 IMITAKLVVVNSELARELGVDWTAALGSSTLTPGTAAAATGATAGSSRISGVIQSFPNGT 252 Query: 224 SVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 S A + ++ L + +S L +++ASP++ A + G ++ Sbjct: 253 SPAVGKANTAITASLLDNN-LQIAISNLMGDASTEVLASPQVSTLDNTEAQVFMGDKVSI 311 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 +V +SG +S + E + + VTP V RI L LH N G + I Sbjct: 312 RVI-DDSGESSTKMVETGIKLTVTPHVSGDNRILLDLHPENNSYGYDEKGEV----VIST 366 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 QE +T+V V GET+ +GG+ +N + +P L DIP G LF++ K +++LV+F Sbjct: 367 QEAKTKVVVADGETVVIGGLTRNENTESESGIPFLKDIPLLGNLFKYSRKSITKKDLVIF 426 Query: 404 ITPRLVSS 411 +TPR++ + Sbjct: 427 VTPRIIRN 434 >UniRef50_B8DPS5 Type II and III secretion system protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPS5_DESVM Length = 552 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 115/435 (26%), Positives = 210/435 (48%), Gaps = 51/435 (11%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 VTL + +V V L++LA N+++SP V G+V++++ VPW + ++ S GL Sbjct: 86 PVTLKLHNVDVGVALRSLAAAAGKNIILSPGVKGSVNVNVNRVPWSDVFKGMLDSNGLDY 145 Query: 83 RQEGNILSVHSIAWQNNN------IARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 +G ++ V ++A + ++ A++ + + P+ + ++YA+A EL K Sbjct: 146 AWQGELIKVITMADKKVELEHATLENQRMAQKLKGRKVGPMVTTVLDVRYAEAAELKKNL 205 Query: 137 EKLLSAK------GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 E LS GS+ VD TN L+++ + L V+ +D P Q++L AHIV Sbjct: 206 EGFLSKDDGGKPVGSVVVDTFTNSLIIQAVEDDQKKLMTLVSNLDKPRAQIQLKAHIVEA 265 Query: 191 NEKSLRELGVKWT------------------------------------LADAQHAGGVG 214 +++ RELG++W + A G G Sbjct: 266 TKETARELGIQWGGVNRVGNMAGSNDLWVTPGGTGGTAGTSPYNGSYTPIFGAPGISGQG 325 Query: 215 QVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 D + + +G G I G +L+++LSAL++ +++I++SP + Q A Sbjct: 326 NGINFPIDTTGKSGAGSLGLMFGTIGGNMLEMQLSALQESSKINILSSPSISTLDNQMAY 385 Query: 275 IKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 + G ++PY VS+ G V+F++AVL +E+TP V+ ++LK+ + ++ Sbjct: 386 TENGEKVPY-VSTNAQGDREVKFEDAVLRLEITPHVIDDKNLKLKVLVKKDEVDLTRTVE 444 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 I K++ ET + V+ GET+ + G+ + +G+ VP L D+ G LF D K Sbjct: 445 GN--PFIIKKQTETTLIVQDGETIVISGLTKDRKSTGRSGVPGLHDVEGLGWLFGSDSKA 502 Query: 395 DERRELVVFITPRLV 409 + E+++FITP ++ Sbjct: 503 SKLEEVLIFITPAVL 517 >UniRef50_D2RIL0 Type II and III secretion system protein n=2 Tax=Acidaminococcus RepID=D2RIL0_ACIFE Length = 405 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 107/411 (26%), Positives = 191/411 (46%), Gaps = 35/411 (8%) Query: 1 MKQWIAA-LLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS 59 MK + + + P + ++L V + PV VLQ++A+ NLV+ + GT+S Sbjct: 1 MKLLLLFCIFCIFTPVRWVLAAEPLSLSVQEAPVRDVLQSMAQMAGRNLVLDSQIPGTLS 60 Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN 119 L + +P+ QAL+ V +S GL R+EGN L V S + R Sbjct: 61 LEIQQLPFPQALEMVTRSQGLCFREEGNTLWVASPERMDALYGRLTVH------------ 108 Query: 120 RSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 L+Y A E A+ + L S + + D TN +L + + L++ + +D P Sbjct: 109 ---PLEYISARETAETLKPLFSTPLAWSRD--TNAILFHGSPGEENRLKEALKALDRPTR 163 Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI 239 Q+ L A I+++ E + RELG++W + G+ G ++G Sbjct: 164 QITLEARILSLGESASRELGLQWDWSALPEGRKKGEGGFGGR------------LHLGHS 211 Query: 240 NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV--SSGESGATSVEF 297 G LSAL Q+ + ++A+PR++ + ASI G IP + + ++ E+ Sbjct: 212 YGASFQARLSALCQEGKAKVLATPRIITLPGREASIFIGDHIPVVTEKVTNSTTTSTTEY 271 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 +A + + TP + Q G I K+H + P + + + I + +T V ++ ET Sbjct: 272 VDAGIRLSYTPYLSQDGLITAKVHTEVSTPTLIAELKN---YRITSRTADTHVRLREKET 328 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 L +GG+ + + + +++PLL +P G+LF+ + R E+ +F+TP L Sbjct: 329 LVIGGLISEQEQHRMEAIPLLSKLPLLGELFKFRSRSRNRTEVCMFLTPYL 379 >UniRef50_B9Z6A5 Type II and III secretion system protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6A5_9NEIS Length = 659 Score = 320 bits (821), Expect = 6e-86, Method: Composition-based stats. Identities = 86/427 (20%), Positives = 174/427 (40%), Gaps = 38/427 (8%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPW 67 + P +++A + +TL D + V + ++ +N V DV ++ + + Sbjct: 161 TLASPQLKSALSRPITLEFRDAALKAVFEVISRTSGINFVFDKDVRPDLKATIFVRNSTI 220 Query: 68 KQALQTVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 + A+Q ++ + L R N + V+ ++ L ++ L Sbjct: 221 EDAIQLLLVTNQLDRRVLNDNTIMVYPNNPAKQKDYQE------------LVIKNFYLAN 268 Query: 127 ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 A+A + A LL + + VD + N +++RD A+ E+ +A DL + L Sbjct: 269 AEAKDTANLIRALLKTR-DVFVDDKRNLVVMRDTPEAVKVAERLIASQDLAEPEAILDVE 327 Query: 187 IVTINEKSLRELGVKWTLADAQH-----------------AGGVGQVTTLGSDLSVATAT 229 +V +N L+ LG+ W G V V T G +VA+ Sbjct: 328 VVEVNRARLQSLGIDWPSQVGYGLLTGGTSTQTGTVTNPTTGAVTPVVTPGVAATVASGV 387 Query: 230 THVGFNIGRING--RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS 287 ++ N + L L Q +++A+PR+ + + A I G ++P S+ Sbjct: 388 INLRNNPLGLTTFIANPALVLHLQAQDTDANVLANPRIRVKNHEKAKIHIGDKVPVFTST 447 Query: 288 ---GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 A SV + + + +EV P++ + + + + + + + I + Sbjct: 448 AVVNAGIAQSVSYLDVGVKLEVKPSIGLDDDVTIDVGLEVSSIVKQVDFGTSTAYQIGSR 507 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 +T + ++ GET L G+ +++ +P LGD+P G+LF + + E+V+ I Sbjct: 508 AADTTLRLRDGETQVLAGLIQDEDRRSITKIPGLGDLPIVGRLFSSNNDSRSKSEIVLLI 567 Query: 405 TPRLVSS 411 TP +V + Sbjct: 568 TPHIVHN 574 >UniRef50_C6P0F2 Type II and III secretion system protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0F2_9PROT Length = 851 Score = 320 bits (820), Expect = 8e-86, Method: Composition-based stats. Identities = 97/423 (22%), Positives = 180/423 (42%), Gaps = 34/423 (8%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWK 68 M +P +++ Q VTL D + V +AL+ +N+++ D+ S+ + D Sbjct: 172 MQMPTLKSKFRQPVTLQFRDANLKMVFEALSRSSGINILLDRDMRNDLKASIFVKDASVA 231 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 AL ++ L E +L+ ++ N A+ + Q L R+ L AD Sbjct: 232 DALDLILMQNQL----EKKVLNDSTVFIYPNTPAKIKEYQ-------DLVIRTFQLTNAD 280 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 A ++ + +L K + V+++ N L++RD A+ E+ +A D+ +V L ++ Sbjct: 281 AKQMQTMIKTMLKTK-DIYVNEKNNSLIIRDTPEAVKMAEKLIASQDINEPEVMLEVEVL 339 Query: 189 TINEKSLRELGVKWTLADAQHAGGVGQ-----------VTTLGSDLSVATATTHVGFNIG 237 + L +LGVKW V T + T N Sbjct: 340 EVLHSKLTQLGVKWPNQLGLSVNATPATSTATTTSGGAVVTTNTPAVPLTVNGLRHINGD 399 Query: 238 RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT---- 293 IN L + L ++ +++ASPR+ + A I G +P +S AT Sbjct: 400 AINVTPLSMTLDLRKELGDSNLLASPRIRVKQHEKAKIMIGDRVPVITNSVTPVATGTPV 459 Query: 294 ---SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQ--ADGEVLAIDKQEIET 348 SV++ + L +EV P + G + +K ++ + + + I + + T Sbjct: 460 VTGSVQYLDVGLKLEVEPDIHMDGEVAIKTYLEVSTIANQVTNAASGSVAYQIGTRNVNT 519 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 + +K GET L G+ +++ SVP LGD+P G LF +G + + E+++ ITP + Sbjct: 520 VLRLKDGETQVLAGLINDEDRKSSASVPGLGDLPILGHLFSSNGDDKRKTEIILSITPHI 579 Query: 409 VSS 411 + + Sbjct: 580 IRN 582 >UniRef50_B3TCB2 Putative bacterial type II and III secretion system protein n=2 Tax=environmental samples RepID=B3TCB2_9ARCH Length = 648 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 112/419 (26%), Positives = 203/419 (48%), Gaps = 26/419 (6%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 + + +K++L + V + + AE N+++SP+V G+V++ + DVPW QA++ + Sbjct: 233 PILFGEKEKISLDFQNADVRNLFRIFAEISGFNVILSPEVGGSVNIRMIDVPWNQAMEII 292 Query: 75 VKSAGLITR-QEGNILSVHSIAWQNNNIARQEAEQARAQA-------NLPLENRSITLQY 126 + ++ L GNI+ V + + +E+ RA + + L + + + Sbjct: 293 LTNSALGRECFGGNIVRVATKVTLAAEDTARLSEKTRAVSERLNERDSEDLVTEVVRVNH 352 Query: 127 ADAGELAKAGEKLLSAKGS--MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELS 184 AD EL+ + L SA+ +T+D RTN L+L D + + + + + +D+ QV + Sbjct: 353 ADITELSTSLNALKSARKDALITIDTRTNTLILNDLRHHVDDMLETIKILDISTPQVLIE 412 Query: 185 AHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT-----------LGSDLSVATATTHVG 233 A IV I++ +ELG+ W L + + + D++ Sbjct: 413 AKIVEISKTFSQELGISWGLVNPEPGFPTVTGNSTFDTQFLVDLRPTVDIATGNVAGFDS 472 Query: 234 FNIGRINGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 G + G + L++ L ALE+ + +I+SPR+ + + A + G +IPYQV+S E Sbjct: 473 LIQGFLPGNIALNVRLEALEKSGKGRVISSPRVTTADNKEARVLSGRDIPYQVNSVEGN- 531 Query: 293 TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 S++F A L + VTP V I + + ++N A + I ++E+ T+V V Sbjct: 532 -SIQFVNAELSLTVTPHVTSDNSIYMTIDATKNAADFAQLAAG--IPTITRKEMHTEVLV 588 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +GET L GI+ + + +VP +P G LFR +D EL+VFITP +V + Sbjct: 589 GNGETTVLAGIYESTSTENKKAVPWFSKLPLVGFLFRAFDDKDTINELLVFITPTIVET 647 >UniRef50_Q7MH82 Type IV pilus (Tfp) assembly protein PilQ n=9 Tax=Vibrionaceae RepID=Q7MH82_VIBVY Length = 594 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 143/434 (32%), Positives = 233/434 (53%), Gaps = 45/434 (10%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + + +++ D+PV VLQ +A+ NLVVS V+G V+L L VPW+Q L +++ G Sbjct: 160 EGKLISINFQDIPVRNVLQLIADYNGFNLVVSDSVTGNVTLRLDGVPWQQVLDIILQVKG 219 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE-- 137 L R EGN++ + + +Q ++ A+ L++ I + +A A ++A+ Sbjct: 220 LDKRVEGNVVLIAPQDELDLREKQQLEKERLAEELGSLKSEIIKVNFAKASDIAEMINGK 279 Query: 138 ---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +LS +GS+ +D+RTN LLLR+ + + + + +D+PV QV++ A IVT+NE + Sbjct: 280 ESVSMLSERGSVAIDERTNSLLLRELPENIEVIREIINSLDIPVKQVQIEARIVTVNEGN 339 Query: 195 LRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN------------GR 242 L ELGV+W + VG + + Sbjct: 340 LDELGVRWGFTSINGSTTVGGSIENNLATIGLYNAGSGSGSGDSGSGGSGGEGGSASIDD 399 Query: 243 LLDLELSA---------------------------LEQKQQLDIIASPRLLASHLQPASI 275 L++ L+A L+++ + +II+SPRL+ ++ +PA I Sbjct: 400 FLNVNLAATSANASSIAFQVAKLGSDLLLDLELSALQRESKAEIISSPRLITTNKKPAYI 459 Query: 276 KQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 +QG+EIPY SS SGAT+V FK+AVL ++VTP + R+ L L ++Q+ PG++++ Sbjct: 460 EQGTEIPYLESSS-SGATTVSFKKAVLSLKVTPQITPDNRLVLDLSVTQDRPGEIVKTGT 518 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 GE +AID Q I TQV V +GET+ LGGIF + D VPLLGD+P G LFR + Sbjct: 519 GEAVAIDTQRIGTQVLVNNGETVVLGGIFQHSITNTTDKVPLLGDLPLLGALFRRSYENV 578 Query: 396 ERRELVVFITPRLV 409 +REL++F+TP+++ Sbjct: 579 GKRELLIFVTPKVI 592 >UniRef50_C9LRH4 Putative secretin and TonB short domain protein n=2 Tax=Selenomonas RepID=C9LRH4_9FIRM Length = 462 Score = 317 bits (812), Expect = 6e-85, Method: Composition-based stats. Identities = 95/425 (22%), Positives = 177/425 (41%), Gaps = 19/425 (4%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHL 62 + A L G A +TL V D V +L ++A L+L++ V G +SL L Sbjct: 21 RVGAFFLAAWFAGALPAAASPLTLEVVDADVTALLTSIARLSGLDLILDDSVKGRISLSL 80 Query: 63 TDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSI 122 DV ++AL + ++ GL + EG +L V + A + + Sbjct: 81 KDVEPEEALMLISRAKGLAVQHEGKVLLVRAAKEAAPFYRMHVLPVHHADLDTAFAAVKL 140 Query: 123 TLQYADAGEL---AKAGEKLLSAKG------SMTVDKRTNRLLLRDNKTALSALEQWVAQ 173 +L A + K G++ +S +G + +D+ TN LL + + E + Sbjct: 141 SLGEAGISAIDENKKNGKEDISEQGLYRTGERLLIDRATNALLFYGTEEEKARAEAVLHS 200 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWTLADA-----QHAGGVGQVTTLGSDLSVATA 228 +D+P QV L A +V + + + +ELGV W + + + + G D V Sbjct: 201 LDVPTEQVSLEARVVALEKNAAKELGVDWDWSPLPIDPHGTSKSGAEGSRRGIDGEVPGV 260 Query: 229 TTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 G+ +++AL + +++A P + + A I G +P + Sbjct: 261 IRFGRTPEGKPYEFYYRAKIAALITDGKANVLARPNITTLQGREAVINIGGSVPVPETQT 320 Query: 289 ESGATSVE--FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 + + +K+A + + TP + + G I ++H + P V + ++ Sbjct: 321 TNSTVTTSITYKKAGIILRYTPRIHENGEITARVHTEVSSPVYV---DALKAYKFQERSA 377 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 +T V +K GET+ +GG+ + VPLLGDIP G F+ + E+++F+T Sbjct: 378 DTTVRLKDGETMVIGGLIGSEESRVFAKVPLLGDIPILGTFFKSVRRTKTDSEIMIFLTA 437 Query: 407 RLVSS 411 ++ Sbjct: 438 HILRD 442 >UniRef50_Q1LE58 Type II and III secretion system protein n=6 Tax=cellular organisms RepID=Q1LE58_RALME Length = 734 Score = 316 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 84/405 (20%), Positives = 168/405 (41%), Gaps = 39/405 (9%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQALQTVVKSAGL 80 VTL D + V +AL+ LN++ DV ++ +T+ + A+ ++ + L Sbjct: 178 PVTLQFRDANIRMVFEALSRTSGLNVIFDRDVRADLKTTIFVTNAAIEDAVDLILLQSQL 237 Query: 81 IT-RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 N L ++ ++ L+ R+ L D+ ++ + L Sbjct: 238 DKKVLNANTLFIYPATPAKQQEYQE------------LKVRTFQLSNVDSKQVQSLLKSL 285 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 L K + VD+R N + +R + EQ +A DLP +V L ++ ++ + L +LG Sbjct: 286 LKIK-EVVVDERANTVTIRGTPDTIRVAEQMIAAQDLPEPEVMLEVQVLEVSRERLTDLG 344 Query: 200 VKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDI 259 + W T+ + S T + L + ++ Sbjct: 345 IAWP-----------NSFTMATPASATTWGVLHHLTANELEVSPLSATANFKLTDTDANL 393 Query: 260 IASPRLLASHLQPASIKQGSEIPYQVSSGESG------ATSVEFKEAVLGMEVTPTVLQK 313 +ASPR+ + + A I G ++P SS ++++ + + +EV P V + Sbjct: 394 LASPRIRTRNKEKARILIGDKVPVISSSSTPSTSGPSFTQTIQYLDVGIKLEVEPQVYRD 453 Query: 314 GRIRLKLHISQNVPGQVLQQADGE------VLAIDKQEIETQVEVKSGETLALGGIFTRK 367 + +KL + + + +Q + + I + T + ++ GET LGG+ + + Sbjct: 454 NDVGIKLALEVSNITKTIQSGNAQTGLSSLAYQIGTRSASTSLRLRDGETQILGGLISDQ 513 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 +++ D VP LG +P G+LF + + E+V+ ITP +V + Sbjct: 514 DRTSADKVPGLGQLPVVGRLFSDHNGDHVKTEIVLQITPHIVRPQ 558 >UniRef50_D0ZFZ5 Type II secretory pathway, component HofQ n=2 Tax=Edwardsiella RepID=D0ZFZ5_EDWTE Length = 409 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 171/404 (42%), Positives = 235/404 (58%), Gaps = 12/404 (2%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 ML+ A + +TL D P+ VLQA+AE LNL++S +V G +LH+ PW + Sbjct: 1 MLLAMSSAGQAMPLTLWFDRAPLPSVLQAVAEFAGLNLILSEEVRGEATLHIAHTPWPRV 60 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 L + + L + IL + S A A + ++ + L++ADA Sbjct: 61 LDALAEIYDLSVVRRDGILLIQSRARAARQAGPAAAPALLKPP--QMRSQRVVLRHADAA 118 Query: 131 ELAKAGEK---LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 + K+ + LL GS D RTN LLLR L+AL W+AQ+D+P+ QV+L+AHI Sbjct: 119 TVEKSLRQRRDLLGEAGSAVADIRTNALLLRAEAARLAALRDWIAQLDVPLSQVQLAAHI 178 Query: 188 VTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE 247 V+I+++ LRELG++W D + G A A GF + RI G+ L + Sbjct: 179 VSISQEGLRELGIRWYSGDERSGGQD-------RLRGAADAYFSAGFQVARIGGQTLAVA 231 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 L+ALE++ ++ IIASP L+A+H Q ASIKQGSE+PY VS GE G +++EFKEAVLGM VT Sbjct: 232 LAALERQDKVAIIASPHLMAAHGQTASIKQGSELPYAVSGGERGVSTMEFKEAVLGMSVT 291 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRK 367 P VL I L L ISQN+PG+V++Q D E LAIDKQEI TQV + G+T LGGIF + Sbjct: 292 PRVLADAHIELALQISQNMPGRVVRQGDSEALAIDKQEITTQVTLSDGDTAMLGGIFQYQ 351 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + P L D+P G L R D + RRELV+FITP L+S Sbjct: 352 RQVDSIGFPWLADVPLLGHLLRSDSQRSGRRELVIFITPTLLSP 395 >UniRef50_A0LFN7 Type IV pilus secretin PilQ n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFN7_SYNFM Length = 636 Score = 313 bits (803), Expect = 7e-84, Method: Composition-based stats. Identities = 107/405 (26%), Positives = 198/405 (48%), Gaps = 14/405 (3%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 + + ++L + D + VL+ LA+ N+V+ PDV+G V+L + VPW Q L ++ Sbjct: 227 KQYTGKPISLDLLDADLRNVLRLLADLTGTNIVIEPDVTGKVTLKVEQVPWDQVLDMIIS 286 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQA-------NLPLENRSITLQYADA 129 L Q G+++ + + + A+Q Q + +T+ YA Sbjct: 287 MNDLGQEQVGSVIRIARRSKLKSEWAQQAEAIRAKQEYLLTSKDLGEINTAYLTVNYAQV 346 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 ++A + S KG ++VD+RT+ ++ D ++ + ++D P QV + A I+T Sbjct: 347 TDVASKINEAKSDKGKVSVDERTSLIIYSDYPGRINNARMLLNRLDRPTSQVLIEARIIT 406 Query: 190 INEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLL---DL 246 + + R LG+ L + N+ ++ G L DL Sbjct: 407 LTSEVKRSLGMNLGF--GGDTPNHSATVPFTDFLINSPPANLFALNLAQMVGTTLLKVDL 464 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY-QVSSGESGATSVEFKEAVLGME 305 +SALE ++ I+A+PR+L + A I QG +IPY +V S T +FK+AVL + Sbjct: 465 TISALETADEIRIMAAPRVLTMNNVKAVISQGVQIPYLKVGDTASNITGTDFKDAVLELA 524 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 VTP + ++R+ + Q+ P + A G+ ID ++I T++ V G + +GGI Sbjct: 525 VTPHITPDHKVRMTIEAKQDEPSSTVTGAQGQ-PGIDTRKISTELLVDDGNIIVIGGIIR 583 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 ++++ + + P L D+P G+LF+ + + +R E+++FI P++V Sbjct: 584 NRDEAKKTATPGLSDVPILGRLFKSNEVDAQRNEILIFICPKIVD 628 >UniRef50_Q5P7D0 General (Type II) secretion pathway (GSP) D protein n=3 Tax=Rhodocyclaceae RepID=Q5P7D0_AZOSE Length = 771 Score = 313 bits (803), Expect = 7e-84, Method: Composition-based stats. Identities = 88/425 (20%), Positives = 172/425 (40%), Gaps = 38/425 (8%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPW 67 L + + VTL D P+ V +AL+ LN V DV V+L + D Sbjct: 171 APLAEALTGPLSKPVTLQFRDAPLRVVFEALSHAAGLNFVFDRDVRVDTPVTLFVRDSSV 230 Query: 68 KQALQTVVKSAGLI-TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 + ++ V + + N + ++ ++ L RS L Sbjct: 231 DEVIKLVAVTQQIERKVLNANSVLIYPATPAKQRDYQE------------LVTRSFYLAN 278 Query: 127 ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 ADA + ++L+ +K M +D++ N L+++D A+ E+ +A +D+ +V L Sbjct: 279 ADAKQAQSLLKQLVKSK-DMFIDEKLNLLVIKDTPQAVRLAERLLASLDVAEPEVMLEVE 337 Query: 187 IVTINEKSLRELGVKWT----------------LADAQHAGGVGQVTTLGSDLSVATATT 230 ++ + LRELG+ + A Sbjct: 338 VLEVARSKLRELGLDFPDEIGYGLLRSQQQITQTQTAAGIVSEVVTLPGSEIAPGVVPRA 397 Query: 231 HVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES 290 G G + L L L A + +++A+PR+ + + A I G ++P ++ + Sbjct: 398 QWGDLTGYVTNPALTLRLRA--EDGDTNLLANPRIRVKNREKAKIHIGEKLPVFTTTSTA 455 Query: 291 G---ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG-QVLQQADGEVLAIDKQEI 346 + SV + + L ++V P V + +K+ + + +V +D + + Sbjct: 456 NVGVSASVSYLDVGLKLDVEPAVTLDDEVAIKVALEVSNIVREVPGPSDSLAYQVGTRSA 515 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 T + +++GET L G+ + + + +P LGD+P G+LF + + E+V+ ITP Sbjct: 516 TTVLRLRNGETQVLAGLISDEERRSAQRLPGLGDLPLIGRLFSSERNNASKTEIVLLITP 575 Query: 407 RLVSS 411 R+V + Sbjct: 576 RIVRN 580 >UniRef50_C9LMV3 Bacterial type II and III secretion system protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMV3_9FIRM Length = 449 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 100/424 (23%), Positives = 183/424 (43%), Gaps = 52/424 (12%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 +P +L V + P+ +VL++LAE N+V V+G+V+ L V K+AL ++ S G Sbjct: 44 EPSDFSLHVKNAPIQEVLRSLAELTGKNIVFGGTVTGSVTADLDHVTPKEALHAMLVSQG 103 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 LI R+EG+ L V + N +S L YA+A E+A+ + Sbjct: 104 LIAREEGSTLIVVGESAMKNGGRA---------------TKSYKLSYAEAKEVAEGLRQ- 147 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 LS + ++ N ++L + + +D+P QV++ A ++ +N +ELG Sbjct: 148 LSDSVHVAYNQTANAVILSGTPLEIMETAAVLRSLDVPEKQVKVEAEVIAVNRSHSKELG 207 Query: 200 VKWTLADAQHAG-----------------GVGQVTTLGSDL---------SVATATTHVG 233 + W +G G + G+ +V + G Sbjct: 208 IDWDFKALTGSGEYRRESWNEQRYVTDDAGNIKYDKNGNPRMRNIEHNGWNVKIPEGYAG 267 Query: 234 FNIGRINGR-----LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 + GR L+AL + I+A P ++ + + A I G++IP V Sbjct: 268 ISYGRSVAGHPYTAFFRANLNALVSTGKARILARPNVVTMNGREAEILIGNKIPVIVEHV 327 Query: 289 ESG--ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 ++G T+ E+++A + + TP + G I ++ + P + I ++ Sbjct: 328 DNGVRTTTTEYRDAGIKLTYTPRISADGEITANVNAEVSTP---YLVPEMRAYRIITRQA 384 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 T V ++SG+ L +GG+ ++ VP+LGDIP G+LF+ + E E+V+ I Sbjct: 385 NTLVRLRSGDMLTIGGLIDKEENKTFRKVPILGDIPLLGKLFQSKSRSVEESEIVIIIKA 444 Query: 407 RLVS 410 ++ Sbjct: 445 EILD 448 >UniRef50_B1XUD4 Type II and III secretion system protein n=1 Tax=Polynucleobacter necessarius subsp. necessarius STIR1 RepID=B1XUD4_POLNS Length = 509 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 89/422 (21%), Positives = 192/422 (45%), Gaps = 40/422 (9%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V L DV + ++ QA+ + +N++V +V GTV++ + +VPW +AL +++ GL Sbjct: 93 VNLNFVDVDIRELAQAMTQVSGVNILVGDEVEGTVTVKINNVPWDKALDNILRIKGLSKS 152 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPL---------ENRSITLQYADAGELAK 134 + + + + + + + + L Y + K Sbjct: 153 VDPGSNIIRIQKPETVLARDEFERKRLEEVSRQIAAKRIVSTQVTEIFRLYYTKPAIVKK 212 Query: 135 AGEKLLSAKG---------------SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 E + +T D+R N ++++ ++ + + + ++++D+ Sbjct: 213 QLEAIFGGNTGAAGAQATRPPGGIIEITTDERINSIIVKGTQSEMELVAKLISKLDIRTQ 272 Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT--------LGSDLSVATATTH 231 +V + A IV ++ ELG ++ + G T+ L + + T Sbjct: 273 EVLIEAFIVEADDDWQYELGSRFGYRNTTGNGTSTNPTSAVGGAVGDLANANIFSRPVTG 332 Query: 232 VGFNIGRI---NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG 288 F +G + L +EL+A+E+ + II++P + + A + G +IPY V Sbjct: 333 APFGLGYLFQTTASQLKVELTAMEKLSLVKIISNPHVFTMDNEEAVVIDGVQIPYPVPGV 392 Query: 289 ESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 + + EFK+A L + TP+++ G + L + ++++ P +I+K+E+ + Sbjct: 393 GTNQITYEFKDAALKLTATPSIVGDGNLFLNMIVNKDSPNYSTS-----PPSINKREVRS 447 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 ++ ++ G +GGI+ + ++ + VPLLG IP G LF + K D++ +L+VFI P++ Sbjct: 448 KLLIQDGTIAVIGGIYDQTKENTVEKVPLLGSIPLLGSLFSYTRKADKKTQLLVFIAPKI 507 Query: 409 VS 410 ++ Sbjct: 508 LN 509 >UniRef50_B8E238 Type II and III secretion system protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E238_DICTD Length = 1421 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 86/387 (22%), Positives = 172/387 (44%), Gaps = 28/387 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V+ + + +VL+ L ++ +N V+ V+G + L+L V + L+ + + + Sbjct: 1062 VSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNRVELPETLEILSRITNISFE 1121 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 + G+ V + A+ P + L+Y L + Sbjct: 1122 KVGSATFVKPLNT----------TVTTAKEGTPTVTKEYKLKYISLDTLKSVVSGIAKD- 1170 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 S D+ + LL++ +S++E +A++D P QV++ ++ ++ ++++++G++W+ Sbjct: 1171 VSFYYDQTSGLLLVQGPADQVSSVESMIAKLDKPTPQVKIDVQVIEVSRENVKDIGIEWS 1230 Query: 204 LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASP 263 ++ + L + + +N + + ALE + + I+A P Sbjct: 1231 ------------TGSISTGLQITANLGWQDLRVSIVNPGQISANIRALETQNKARILAQP 1278 Query: 264 RLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 + + I G +P +S G V F + + + VTPTV G I ++ Sbjct: 1279 SMTTLSGKATRIMIGDRVP-LISYDAQGNRQVSFVDVGIILNVTPTVNADGTITANINPQ 1337 Query: 324 QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPW 383 + + +V I +E +T V +K+GETLALGG+ ++ VPLLGDIP Sbjct: 1338 VSTIQGYVS----DVPIISTREAQTIVNLKNGETLALGGLLRQEEIDSMSKVPLLGDIPI 1393 Query: 384 FGQLFRHDGKEDERRELVVFITPRLVS 410 G+LF+ + REL++ ITP+L+ Sbjct: 1394 LGELFKARKTQKVERELIILITPKLIE 1420 Score = 98.7 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 72/162 (44%), Gaps = 13/162 (8%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV 75 V+ Q++++ D + VL+A+ + LN++ V G +S++L D+P+K A ++ Sbjct: 306 VKDKFQQRISVSFDRAEIRDVLKAMGQLVGLNIITDIGVQGRISVYLKDIPFKDAFYALL 365 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 S+ L Q+G I+ V ++ + + L + L+Y ++ + Sbjct: 366 ASSDLGYIQQGEIIIV------------ANLDKLQKIESRDLMTKVYQLKYFESQKAKDI 413 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 K+ S D N L++ + + +E + +D+P Sbjct: 414 LSKI-SKTAIFDSDDSRNWLIVSAPPSEFAKIENTIKTLDIP 454 Score = 91.4 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 67/165 (40%), Gaps = 17/165 (10%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 VT + + VLQ +A + LN ++ P VSGTV L + VP + L + + A Sbjct: 576 VTASLKKSDIRDVLQEIASKTDLNFIIDPKVSGTVDLFVNKVPLDEVLTIIQRLANFDME 635 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 + G + Q + + + + L+Y ++ + G L+ Sbjct: 636 KVGKTYYIKPKEVQTATVPQI------------ISTKLYVLRYITLQDILRVGGSLVK-N 682 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 S++ D +T L+ + + L L+ ++++D+ A + Sbjct: 683 LSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKK----EAVVA 723 Score = 85.2 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 64/165 (38%), Gaps = 17/165 (10%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V+ + + +VL+ L ++ +N V+ V+G + L+L V + L + + L Sbjct: 738 VSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNRVELPEVLNIIQRVGKLSIT 797 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 E + V + + + L+Y ++ + G L+ Sbjct: 798 TEDKVTYVKPYEEKVTVPV------------EVAKTKIYALKYITLSDIERVGGSLVK-N 844 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 S++ D +T L+ + + L L+ ++++D+ A + Sbjct: 845 LSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKK----EAVVA 885 Score = 84.8 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 17/165 (10%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V+ + + +VL+ L ++ +N V+ V+G + L+L V + L + K L Sbjct: 900 VSCDLRSADIREVLRELGKKADINFVIDQKVTGQIDLYLNRVELPEVLNIIQKVGKLSIT 959 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 E + V + + + L+Y ++ + G L+ Sbjct: 960 TEDKVTYVKPYEEKVTVPV------------EVAKTKIYALKYITLSDIERVGGSLVK-N 1006 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIV 188 S++ D +T L+ + + L L+ ++++D+ A + Sbjct: 1007 LSLSYDDKTKLLIAQGKEDDLKVLDDLISRIDVEKK----EAVVA 1047 Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 5/154 (3%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT- 82 VTL + +LQ + ++ N++ S DVSG V L L VP +A+ +V+S G I Sbjct: 478 VTLTAKGDDIKDILQEIVQKSGKNIIFSKDVSGGVYLTLNRVPLDRAVDLIVRSTGYIYE 537 Query: 83 -RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 R+ G IL A + + E + + + + +L+ +D ++ + Sbjct: 538 VREGGVILVSAPKAEGVPSPIIEIKELVKVEKIGDVFYVTASLKKSDIRDVLQEIAS--K 595 Query: 142 AKGSMTVDKR-TNRLLLRDNKTALSALEQWVAQM 174 + +D + + + L NK L + + ++ Sbjct: 596 TDLNFIIDPKVSGTVDLFVNKVPLDEVLTIIQRL 629 >UniRef50_A8AIN8 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AIN8_CITK8 Length = 640 Score = 310 bits (795), Expect = 6e-83, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 144/343 (41%), Gaps = 22/343 (6%) Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG-------------- 136 V S + + R Q + N R L+YA+A ++ Sbjct: 237 VISGSEEARARTRTLIAQLDREQNNEGNTRVFYLKYANAAKVVPVLTGIGEQMKDKPGAA 296 Query: 137 ---EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 + + ++T D+ TN L++ +++LE+ + ++D+ QV + A I + + Sbjct: 297 KSKSPVAATDLNITADESTNSLVITAQPNVMNSLEKVIDKLDIRRPQVLVEAIIAEVQDG 356 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQ 253 + +LGV+WT G + G G NG ++AL Sbjct: 357 AGTDLGVQWTSKHGGVQFGATGLPIGQVKNGTIKGVNFTGMATGFFNG-DFGALMTALST 415 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPT 309 + DI+++P ++ + AS G ++P Q ++G++ +VE K +++ P Sbjct: 416 NGKNDILSTPSVVTLDNKEASFNVGQDVPVLSGSQTTTGDNVFNTVERKTVGTKLKILPQ 475 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 + I +K+ + + + + I +V V SG+T+ LGG+ K Sbjct: 476 INDGDMIHMKIEQEVSSVDASSTEDSSLGPTFNTRTINNEVMVHSGQTVVLGGLIENVTK 535 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 VPLLGDIP GQLFR+ ++ +R L+VFI ++ + Sbjct: 536 QNVSKVPLLGDIPLVGQLFRYTSQDTTKRNLMVFIHTTVLRDD 578 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 66/188 (35%), Gaps = 8/188 (4%) Query: 1 MKQ--WIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV 58 MK+ W L L + + + + + + + ++V P V GTV Sbjct: 1 MKKFPWACVALTTLALYSSSLFAANFSASFKNTDIREFIDTVGRNLNKTILVDPSVQGTV 60 Query: 59 SLHLTDV----PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQAN 114 S+ +V + Q +V+ GL N + + A+ Sbjct: 61 SVRTYNVLTEDEYYQFFLSVLDLYGLSVIPMDNGMVKVVRSSVARTAGTPIADSKNPGKG 120 Query: 115 LPLENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVA 172 + R + ++ ELA +L + G++ + +N LLL + ++ L V Sbjct: 121 DEIITRVVRMENVPVRELAPLLRQLNDATGIGNVVHFEPSNVLLLTGKASVVNRLVDLVQ 180 Query: 173 QMDLPVGQ 180 ++D Q Sbjct: 181 RVDRSGVQ 188 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 57/163 (34%), Gaps = 20/163 (12%) Query: 33 VAQVLQALAEQEKLNLVVSPDVSGT----VS--LHLTDVPWKQALQTVVKSA---GLITR 83 V V ++A + G ++ + + +VP ++ + + G+ Sbjct: 96 VKVVRSSVARTAG-TPIADSKNPGKGDEIITRVVRMENVPVRELAPLLRQLNDATGIGNV 154 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 +V + + + + R R + + L YA A EL+ L + + Sbjct: 155 VHFEPSNVLLLTGKASVVNRLVDLVQRVDRSGVQRREIVPLHYASAKELSDMLNNLNNEE 214 Query: 144 ----------GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + D+ TN L++ ++ A + +AQ+D Sbjct: 215 QKGQNAPQLATKVVADEETNSLVISGSEEARARTRTLIAQLDR 257 >UniRef50_P31780 General secretion pathway protein D n=32 Tax=Gammaproteobacteria RepID=GSPD_AERHY Length = 678 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 92/408 (22%), Positives = 156/408 (38%), Gaps = 56/408 (13%) Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEGNIL---------------SVHSIAWQNNNIARQ 104 + L + ++ V Q GN V S + Q Sbjct: 195 IKLKYASAGEMVRLVTNLNKDGNSQGGNTSLLLAPKVVADERTNSVVVSGEPKARARIIQ 254 Query: 105 EAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA---------------------- 142 Q R L+Y A ++ + + + S+ Sbjct: 255 MVRQLDRDLQSQGNTRVFYLKYGKAKDMVEVLKGVSSSIEADKKGGGTATTAGGGASIGG 314 Query: 143 -KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVK 201 K +++ D+ TN L++ ++ LEQ VA++D+ QV + A IV I + LGV+ Sbjct: 315 GKLAISADETTNALVITAQPDVMAELEQVVAKLDIRRAQVLVEAIIVEIADGDGLNLGVQ 374 Query: 202 WTLADAQHAGGVGQVTTLGS---------DLSVATATTHVGFNIGRINGR----LLDLEL 248 W + +GS D T + N + + + Sbjct: 375 WANTNGGGTQFTNAGPGIGSVAIAAKDYKDNGTTTGLAKLAENFNGMAAGFYQGNWAMLV 434 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV-----SSGESGATSVEFKEAVLG 303 +AL + DI+++P ++ + AS G E+P Q +SG++ +++E K Sbjct: 435 TALSTNTKSDILSTPSIVTMDNKEASFNVGQEVPVQTGTQNSTSGDTTFSTIERKTVGTK 494 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 + VTP + + + L + + G+ DG D + ++ V VKSGET+ LGG+ Sbjct: 495 LVVTPQINEGDSVLLTIEQEVSSVGKQATGTDGLGPTFDTRTVKNAVLVKSGETVVLGGL 554 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + K VPLLGDIP G LFR +R L+VFI P ++ Sbjct: 555 MDEQTKEEVSKVPLLGDIPVLGYLFRSTSNNTSKRNLMVFIRPTILRD 602 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH 61 K W A + + +A + + + + + + + + +++ P V G +++ Sbjct: 6 KGWRLATVAAALMMAGSAWATEYSASFKNADIEEFINTVGKNLSKTIIIEPSVRGKINVR 65 Query: 62 ----LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPL 117 L + + Q +V+ G N + + A ++ + Sbjct: 66 SYDLLNEEQYYQFFLSVLDVYGFAVVPMDNGVLKVVRSKDAKTSAIPVVDETNPGIGDEM 125 Query: 118 ENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 R + ++ ELA +L + G++ +N LL+ ++ L + V ++D Sbjct: 126 VTRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYDPSNVLLITGRAAVVNRLVEVVRRVD 185 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL 219 Q I+ + S E+ V+ + G T+L Sbjct: 186 KAGDQ---EVDIIKLKYASAGEM-VRLVTNLNKDGNSQGGNTSL 225 >UniRef50_B5YDZ7 Bacterial type II and III secretion system protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDZ7_DICT6 Length = 1256 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 89/387 (22%), Positives = 172/387 (44%), Gaps = 28/387 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V+ + + +VL+ L ++ +N V+ V+G + L+L V + L + K A + Sbjct: 898 VSCDLRGADIREVLRELGKKADINFVIDQKVTGQIDLYLNKVELPETLDILSKIASISFE 957 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 + G++ V + P+ + L+Y L + Sbjct: 958 KVGSVTFVKPFTTA----------VVATKEGAPIVTKEYKLKYISLDTLKSVVSGIAKD- 1006 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWT 203 + D+ + LL++ +S++E +A++D P QV++ ++ ++ ++++++G++W Sbjct: 1007 VNFYYDQTSGLLLVQGPADQVSSVESMIAKLDKPTPQVKIDVQVIEVSRENIKDIGIEWG 1066 Query: 204 LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASP 263 ++ + L + I IN + + ALE + + I+A P Sbjct: 1067 ------------TGSISTGLQITANVGWQDLRISIINPGQISANIKALESQNKAKILAQP 1114 Query: 264 RLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 + + I G +P +S G V F + + + VTPTV G I L+ Sbjct: 1115 SMTTVSGKSTRIMIGDRVP-LISYDAQGNRQVSFVDVGIILNVTPTVNADGTITANLNPQ 1173 Query: 324 QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPW 383 + +Q +V I +E +T V +K+GETLALGG+ ++ VPLLGDIP Sbjct: 1174 VSTIQGYVQ----DVPIISTREAQTIVNLKNGETLALGGLLRQEEIESMSKVPLLGDIPI 1229 Query: 384 FGQLFRHDGKEDERRELVVFITPRLVS 410 G+LF+ + REL++ ITP+++ Sbjct: 1230 LGELFKARKIQKVERELIILITPKIIE 1256 Score = 98.7 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 13/162 (8%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV 75 V+ Q++++ D + VL+A+ + LN++ V G +S++L D+P+K A ++ Sbjct: 304 VKDKFQQRISVSFDRAEIRDVLKAMGQLAGLNIITDIGVQGRISVYLKDIPFKDAFYALL 363 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 S+ L Q+G I+ V ++ + + L + L+Y ++ + Sbjct: 364 ASSDLGYIQQGEIIIV------------ANLDKLQKIESRDLVTKVYQLKYFESQKAKDI 411 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 K D N L++ + + +E + +D+P Sbjct: 412 LSKTSKTAV-FDSDDSRNWLIVSAPPSEFAKIESTIKTLDIP 452 Score = 92.1 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 75/173 (43%), Gaps = 13/173 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 VT + + VLQ +A + LN +V P VSGTV L + VP + L + + A Sbjct: 574 VTASLKKSDIRDVLQEIASKTDLNFIVDPKVSGTVDLFVNKVPLDEVLTIIQRLANFDME 633 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 + G + Q + + + + L+Y ++ + G L+ Sbjct: 634 KVGKTYYIRPKEVQTATVPQV------------ISTKLYVLKYITLQDILRVGGSLVK-N 680 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 S++ D +T L+ + + L L++ ++++D+ + +S ++T+ + + Sbjct: 681 LSLSYDDKTRLLIAQGKEDDLKVLDELISRIDVEKKEAVVSRELLTVEREGDK 733 Score = 86.0 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 73/173 (42%), Gaps = 13/173 (7%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V+ + + +VL+ L ++ +N V+ V+G + L+L V + L + ++ L Sbjct: 736 VSCDLRGADIREVLRELGKKADINFVIDQKVTGQIDLYLNKVELPEVLNIIQRAGKLSIT 795 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 E + V + + + L+Y ++ + G L+ Sbjct: 796 TEDKVTYVKPYEEKVAVPV------------EVAKTKIYALKYITLSDIERVGGSLVK-N 842 Query: 144 GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 S++ D +T L+ + + L L++ ++++D+ + +S ++T+ + + Sbjct: 843 LSLSYDDKTRLLIAQGKEDDLKVLDELISRIDVEKKEAVVSRELLTVEREGDK 895 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 5/154 (3%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT- 82 VTL + +LQ + ++ N++ S DVSG V L L VP +A+ +++S+G I Sbjct: 476 VTLTAKGDDIKDILQEIIQKSGKNIIFSKDVSGGVYLTLNRVPLDRAIDLIIRSSGYIYE 535 Query: 83 -RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 R+ G IL + + E + + + +L+ +D ++ + Sbjct: 536 VREGGVILVSAPKIEGAPSPIIEIKELVKIDKIGDVFYVTASLKKSDIRDVLQEIAS--K 593 Query: 142 AKGSMTVDKR-TNRLLLRDNKTALSALEQWVAQM 174 + VD + + + L NK L + + ++ Sbjct: 594 TDLNFIVDPKVSGTVDLFVNKVPLDEVLTIIQRL 627 >UniRef50_A8PP54 Putative fimbrial assembly protein PilQ n=1 Tax=Rickettsiella grylli RepID=A8PP54_9COXI Length = 442 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 119/429 (27%), Positives = 210/429 (48%), Gaps = 36/429 (8%) Query: 2 KQWIAALLLMLIPGVQ--------AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPD 53 K+ I +L L + Q K +K+TL + + V L+ L+E NL++ Sbjct: 7 KKIIFSLFLAIALNFQLVAHENSFEKKDEKITLNFNHINVNAALRYLSELNNNNLIIDEI 66 Query: 54 VSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQA 113 + G +S++L DV W QAL ++++ GL + + + + Q Sbjct: 67 IQGKLSIYLHDVSWDQALDCILQTRGLAKQAIPHGWFITTAENLLKQEKVNSDIQKEKNN 126 Query: 114 NLPLENRSITLQYADAGELAKAGE----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQ 169 PL + I ++Y A E+ K + LLSA+ + D TN L ++D+ ++ + Sbjct: 127 LCPLIFKVIPIRYRKASEIIKLLKDKANTLLSAQAIVNADNLTNSLWIKDSPVQMNRIIH 186 Query: 170 WVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVT------------ 217 + ++D P+GQ+ + A +V+I++ +ELG ++ L+ + + + T Sbjct: 187 LIKKLDKPIGQILIEARVVSIDQNKEKELGAQFNLSRMRPVNDLLKSTLRNEVSNQNTHL 246 Query: 218 ------TLGSDLSVATATTHVGFNIGRIN-GRLLDLELSALEQKQQLDIIASPRLLASHL 270 L + + +G + + LDLELSALE++ ++I++P L+ + Sbjct: 247 LQHLTMDLPLFSANSLGLASLGLRLLNLGKNSFLDLELSALEKEGAAEVISTPHLITADQ 306 Query: 271 QPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV 330 QPA I+ G EIPYQ + G + + FK+AVL ++VTP ++ + RI L L ++Q+ P V Sbjct: 307 QPAFIEAGDEIPYQEKASGGGTSLI-FKKAVLSLKVTPQIMPQERIILDLEVNQDQPNSV 365 Query: 331 LQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRH 390 + + I + I+TQ+ VKSGET+ LGG++ + VP LG +P G+LFR Sbjct: 366 M----VDAPTIKARGIKTQIIVKSGETIVLGGVYEYSQGKLEQRVPFLGSLPLIGRLFRL 421 Query: 391 DGKEDERRE 399 + R E Sbjct: 422 TKVYNRRSE 430 >UniRef50_Q47JK8 Type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal n=2 Tax=Betaproteobacteria RepID=Q47JK8_DECAR Length = 715 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 119/439 (27%), Positives = 209/439 (47%), Gaps = 45/439 (10%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 + +V++ + V +L+ +AE+ LN V+S V+GT +L L DVP Q + + + Sbjct: 273 YQGPRVSINYQNGDVRALLRLMAEELGLNAVISETVTGTTTLVLKDVPADQVIDIIFQQK 332 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAK---- 134 GL R++GNI+ + + + + PL+ L Y A ++A+ Sbjct: 333 GLDMRKKGNIIMIAPRDEIATREKLEFESKQQISELEPLKLEQFQLNYQKAADVARLLAG 392 Query: 135 -------------------AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 A +++LS +GS D ++N + + D + L + ++A +D Sbjct: 393 LPPLGAAGAAAAPAPGTNVAAQRILSKRGSAVADPQSNIIFINDIPSKLEEIRSFIAAID 452 Query: 176 LPVGQVELSAHIVTINEKSLRELGVKWTLAD-----------------AQHAGGVGQVTT 218 QV + A +V + R LG K+ + + AG Sbjct: 453 TGARQVLIEARVVEAQDSFNRALGGKFGFLNKQAVQPAGSGINVAGGSSTTAGQSTSTPM 512 Query: 219 LGSDLSVATATTHVGFNIGRIN-GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQ 277 +G +L + + ++ + R+L+LEL+ALE I++SPR++ ++ A I+ Sbjct: 513 VGVNLPSPSTGGSLALSLFTASFSRILNLELAALESDGLGKIVSSPRVITANNVKAKIED 572 Query: 278 GSEIPYQVSSGESGAT--SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV--LQQ 333 G+EIPY + G T +V FK A L +EVTP + +G +R+ L + + + Sbjct: 573 GTEIPYVTTQSSGGTTTATVSFKPAKLSLEVTPQITPEGTVRMNLVVKKEEADWTKAVVL 632 Query: 334 ADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGK 393 I +ET V V++G T+ +GG+F ++ + VPLLGDIP+FG LF++ Sbjct: 633 NGYANPPIKSSVVETNVVVENGGTVVIGGVFITDTQNSVEKVPLLGDIPFFGWLFKYKND 692 Query: 394 EDERRELVVFITPRLVSSE 412 +RREL+VFITPR++S + Sbjct: 693 IGKRRELLVFITPRVISDK 711 >UniRef50_Q0BFS7 Type II and III secretion system protein n=7 Tax=Burkholderia RepID=Q0BFS7_BURCM Length = 812 Score = 306 bits (785), Expect = 8e-82, Method: Composition-based stats. Identities = 82/403 (20%), Positives = 178/403 (44%), Gaps = 20/403 (4%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT--VSLHLTDVPWKQAL 71 P + A + V+L P+A + ++ +N V DV + +L + A+ Sbjct: 169 PQLSDALRKPVSLNFKQQPLANIFDVISRVSGVNFVFDRDVDTSHAATLFAERTTAEDAI 228 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 ++++ L E +L H++ + + R+ L +ADA Sbjct: 229 NLLLRTNQL----EKKVLDRHTLLVYPSQPEKARNY-------TEFAIRTFFLSHADAKS 277 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 + A +++ K + VD+R N +++RD + E+ V +D+P +V L ++ +N Sbjct: 278 VMAALRQMIKPK-DVYVDERVNAVVMRDTPETIQVAERVVMGLDIPQSEVTLDVQVLEVN 336 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 +LGV++ +A G + L + VG + L L + L Sbjct: 337 MNDSLDLGVQYPGKIQFNALGGVEGGALTLGDLLRLNRDRVGVS---SESGGLALAIDLL 393 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS--VEFKEAVLGMEVTPT 309 +++ + +A+P++ +++ A+IK G +P ++ +G + V +++ L ++V P Sbjct: 394 QKQGKTKTLANPKIRVRNMEKANIKIGERVPIVTTTNANGVVTESVSYQDVGLMLKVEPR 453 Query: 310 VLQKGRIRLKLHISQNVP-GQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 + + +K+++ + + + ++ + ET + K+GET L G+ R Sbjct: 454 ISLNEEVSVKVNMEVSSILTKETTKTGLVAYSLGTRNAETLMTAKNGETQILAGLVKRNE 513 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +P + +P G+LF +G+ +ER E+V+ ITP + + Sbjct: 514 SDSVAGLPGVSGLPVLGRLFGSNGRSNERSEIVLLITPHIERN 556 >UniRef50_A6C2R4 Type IV pilin multimeric outer membrane protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2R4_9PLAN Length = 799 Score = 306 bits (785), Expect = 8e-82, Method: Composition-based stats. Identities = 97/439 (22%), Positives = 185/439 (42%), Gaps = 49/439 (11%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ 69 +L + +L + D + QVL L E LN++ V+GT+S +L +V Q Sbjct: 267 PVLKISPNNDSSETFSLQIQDAEIMQVLDMLGELSGLNILTGQGVTGTISANLKNVTPAQ 326 Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 AL +++S L + +EG + V + A + + +++ + + + Y A Sbjct: 327 ALDAILRSRDLTSEKEGEFIYVMTQAQL----------ELKKKSSRKVITKLYSPFYISA 376 Query: 130 GELAKAGEKLLSAKGSMT-----------VDK---------RTNRLLLRDNKTALSALEQ 169 EL +L+ + D +T+ +L+RD L +++ Sbjct: 377 KELQNLITPILTENVGIVSLTSPSEVGIAPDPTSAGGDSFAQTDSILVRDYPEILEEVDR 436 Query: 170 WVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ-------HAGGVGQVTTLGSD 222 + +MD+P QV + A I+++ + GV + + G + Sbjct: 437 LLEKMDIPPMQVVIEAMILSVALNDDMKFGVNFAMLGGNNKNLVVDGNGNTLNNASGFPG 496 Query: 223 LSVATATTHVGFNIGRING-------RLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 ++ G I + G + + ALE + ++IASP+L A + Q A + Sbjct: 497 SGSSSIVPPTGQFIADVAGLKYGFLHGDISGFIEALEDVTETNLIASPQLRALNKQKAEL 556 Query: 276 KQGSEIPY--QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQ 333 G I Y +G + +V F ++ + + + P + G+IR+++H ++ Sbjct: 557 IIGDRISYSTVTQNGNTSIQNVNFLDSGIVLNLRPFITPDGQIRMEVHPERSS---ATIN 613 Query: 334 ADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGK 393 + + E+ T V V+ G T+ +GG+ + ++ VP LG +P G FR + Sbjct: 614 PSTNLPDLRTTEVTTNVMVRDGHTVVIGGLIEERTSDTRNQVPFLGALPVIGNAFRQQRE 673 Query: 394 EDERRELVVFITPRLVSSE 412 R EL+V ITPR+V +E Sbjct: 674 ITNRTELIVLITPRIVRAE 692 >UniRef50_C6WVN7 Type II and III secretion system protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVN7_METML Length = 659 Score = 306 bits (785), Expect = 9e-82, Method: Composition-based stats. Identities = 90/412 (21%), Positives = 185/412 (44%), Gaps = 25/412 (6%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT--VSLHLTDVPW 67 + IP +++A + +TL +V V V + + + +N ++ S+ + D P Sbjct: 180 ITAIPQIKSAFKKPITLEFKNVSVRSVFEFIGKAANINFSYDQELRDNQRTSIFVRDTPI 239 Query: 68 KQALQTVVKSAGLIT-RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 + A+Q ++ + L N L ++ ++ R+Q L RS L Sbjct: 240 EDAIQVILTTNQLAKKVLNDNTLLIYPVS--------------RSQEYQELYVRSFYLNS 285 Query: 127 ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 DA + +L +K + +D++ N L++RD ++ E+ +A DL +V L Sbjct: 286 IDAKRAMNLIKTVLKSK-DVYIDEKLNTLVMRDTAESIEIAEKLIASQDLIEPEVMLEVE 344 Query: 187 IVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATT---HVGFNIGRINGRL 243 ++ IN +SL +GV++ + G + ++ + + +G Sbjct: 345 VMEINRRSLENIGVRYPSQVSVGVQGKTSSNGVSTNTPGRLSLAELKNFNSGLGVFTISD 404 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEA 300 L L+ L Q +++A+P++ + + A I G +IP S S + +V + E Sbjct: 405 PVLALNLLHQDTDTNLLANPQIRVKNREKAKIHVGDKIPVFTSVANSTGFVSQTVNYLEV 464 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVP-GQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 + ++V PT+L + ++ +K+ + + QV I + T +++K+GET Sbjct: 465 GIKLDVEPTILLQDQVNIKVGLEVSNITDQVKTDTGVLAYTIGSRNANTTLQLKNGETQI 524 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 L G+F ++ + VP L +P+ G+LF + + E+V+ ITPR++ + Sbjct: 525 LAGLFRDDGQNISNKVPGLSSLPFIGRLFTDKNNDKRKNEIVLLITPRILHN 576 >UniRef50_Q1H1N3 Type II and III secretion system protein n=2 Tax=Methylophilaceae RepID=Q1H1N3_METFK Length = 653 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 89/408 (21%), Positives = 185/408 (45%), Gaps = 25/408 (6%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQAL 71 P ++++ + ++L D+ + V + +++ +N ++ S+ L + P ++A+ Sbjct: 185 PHIRSSFKRPISLEFKDITIKSVFEFISQAAAINFTYDQELRSDQRTSVFLRNTPIEEAI 244 Query: 72 QTVVKSAGLIT-RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 ++ S L N L ++ ++ R+Q RS L DA Sbjct: 245 DVILASNQLGKKVLNDNTLLIYPLS--------------RSQEYQETFVRSFYLSNTDAK 290 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 +L + ++ K + +D++ N L++RD A+ E+ + D+ +V L ++ I Sbjct: 291 KLMAMIKTVVKTK-DIYIDEKLNTLVMRDTPEAIRTAEKLIMSQDMAEPEVMLEVEVLEI 349 Query: 191 NEKSLRELGVKWTLA---DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE 247 N +SL +G+++ D Q V TTL + N+G + L Sbjct: 350 NRRSLENIGIRYPTNVSLDVQGRDTVNGTTTLTPGKLTINELKNFNSNLGVFSISDPVLA 409 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGM 304 L+ L+Q +++A+P + + + A I G IP S S + +V + E + + Sbjct: 410 LNLLQQDTDTNLLANPHIRVKNREKAKIHVGDRIPVLTSVANSTGFISQTVNYIEVGVKL 469 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGI 363 +V PT+L + + +K+ + + ++ + G V I + T + +K GET L G+ Sbjct: 470 DVEPTILLRDEVSIKIGLEVSNQTDRMETSSGTVTYTIGTRNASTILRLKDGETQILAGL 529 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + VP L +P G+LF ++ + ++E+ +FITPR++S+ Sbjct: 530 MRNDEQKITNGVPGLSKLPLIGKLFNNNNNDLSKKEIALFITPRIISN 577 >UniRef50_A3YI86 Type IV pili biogenesis protein PilQ n=1 Tax=Marinomonas sp. MED121 RepID=A3YI86_9GAMM Length = 390 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 115/405 (28%), Positives = 199/405 (49%), Gaps = 21/405 (5%) Query: 6 AALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDV 65 LI +Q++ + + V D + L LA Q +L+++P ++ +SL L +V Sbjct: 3 FKAWCCLILWLQSSYLYAMDVQVKDKDIQDFLPWLAAQTDNSLILNPAINANLSLSLRNV 62 Query: 66 PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQ 125 W+ + + L + ++ E + ++ Sbjct: 63 NWRDLMGFIAAQHELTLTWAEETAVLMP---------KKAKSLDSKPVKERCEAKFWHIE 113 Query: 126 YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSA 185 +A A ++++ + +L K ++ D RTN ++ +D + L + V +D P+ Q+E+SA Sbjct: 114 HALAEDVSRHLK-ILYPKLVLSYDNRTNSIISQDCHAS-PQLLEMVRWLDSPLRQIEISA 171 Query: 186 HIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLD 245 I + ++GV+W Q AG + DL+ ++T+ + F + + + LL Sbjct: 172 RIAQVQNAVESQIGVEWQ---GQLAGDTLSTASGLVDLATTSSTSGLSFAVAK-SDDLLA 227 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGME 305 L LS LE +I++ P+++ + Q A I+ G+E+PYQ S E T VEFK+A L +E Sbjct: 228 LNLSFLESNGLANIVSEPKIVTAEGQMAKIESGTEVPYQTSDDEG--THVEFKQAGLTLE 285 Query: 306 VTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFT 365 V P V Q +++L L I Q+ G++ V +I+ I TQV V + ETL LGGI+ Sbjct: 286 VIPFVKQGDKVQLSLKIYQDAVGEMY----NGVPSIETNRINTQVLVGNQETLVLGGIYR 341 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + VP GD+P+ G LFRH + E+ EL+VFITP+L+ Sbjct: 342 DEVWESTSKVPFFGDLPFVGALFRHQAQRQEKVELLVFITPKLLQ 386 >UniRef50_P03668 Putative assembly protein ORF430 n=1 Tax=Pseudomonas phage Pf3 RepID=VG430_BPPF3 Length = 430 Score = 303 bits (777), Expect = 7e-81, Method: Composition-based stats. Identities = 115/416 (27%), Positives = 204/416 (49%), Gaps = 16/416 (3%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 M + I AL+L A ++T+ ++ + + +A+ ++V+ P + G VSL Sbjct: 1 MIRSIIALMLSFALVPFAFASDRLTVKHHEIDIRVAIPLVADFCGRSVVLGPSIQGVVSL 60 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQAN---LPL 117 DVP QA +++S L++ G++L + ++ N+ + + + + + Sbjct: 61 DFDDVPCSQAFDLLLESNHLLSSMVGDVLVITAMDQVLNSERKADDLRTFRRDLFNANDI 120 Query: 118 ENRSITLQYADAGELAKAGE----KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQ 173 E R I + +A A E+ + L + SMTVD+RTN + + ALE + Sbjct: 121 ERRVINIVHASASEVVSLFKESFMSLDAPGMSMTVDERTNSVFAALPSSFFPALESVIQA 180 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVG 233 +D+PV QV + A++V + + LG+ W A +G + + + A + +G Sbjct: 181 IDVPVRQVAIEANVVEASVDWSKRLGLNWG-----GALSLGNWSAVTAGDLSVAAGSSIG 235 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 F N LD +A+E + +++ P LL Q AS+ +G+E+PYQ S GAT Sbjct: 236 FGFLS-NTLSLDGLFTAMENEGNGRVVSRPTLLTLDRQSASVLRGTELPYQ-QSAGDGAT 293 Query: 294 SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVK 353 SV FK A L +EV P + I +++ +S++ P A V ID + T + V Sbjct: 294 SVAFKHAALSLEVKPVISPDNSIVIEVLVSRDSPN--FSNAIDGVPPIDTNRLVTTIRVP 351 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+T+ LGG+++ N+ G V + IP G+LF+ E+ EL++F+TPR++ Sbjct: 352 HGQTVVLGGVYSTINQQGSSRVSGISRIPGIGRLFKKKEHVTEQYELLIFLTPRIL 407 >UniRef50_C8X4Q5 Type II and III secretion system protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4Q5_DESRD Length = 499 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 105/427 (24%), Positives = 198/427 (46%), Gaps = 45/427 (10%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLI 81 +KV+L D + +L+ LA N+V+S ++SGT+SL + D+PW QA +V+ + GL Sbjct: 76 EKVSLKFRDNKIQVILRTLASAASQNIVMSNNISGTMSLDVKDIPWSQAFLSVITTNGLT 135 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYA-------------- 127 +G+I+ V S Q+ ++ L+ + + YA Sbjct: 136 YSWQGDIIQVQSPKDMQMEKELQQIQKETQI----LQTTVVDIDYAHIVDKGVKSGNTND 191 Query: 128 --DAGELAKAGEKLL------SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 + +L K ++L S +G++ VD+ N L+++ K + + ++ P Sbjct: 192 NGNLDQLEKTLREVLKNASGGSKEGTLFVDRENNALIIQATKEDTQRILHVLNHLERPRK 251 Query: 180 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGV----------------GQVTTLGSDL 223 Q+ + A IV + + RELG++W G+ +TTL Sbjct: 252 QIHIEASIVEATQNTARELGMRWRGRYVTSGRGIEDVGIIGDAQEPEDWGSAITTLPGSG 311 Query: 224 SVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 + +G +G I G +L +L ALE++ Q++I+ASP L Q AS + G +PY Sbjct: 312 TDTLGGLKLGTVVGEIAGNVLFSQLQALEKEGQVNILASPSLTTMDNQSASTQHGERVPY 371 Query: 284 QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 + + E G V+F++ +G++V P +++ + + + ++++ I Sbjct: 372 ET-TDEDGDRVVKFEDVAMGLKVHPRIIEGDLMAMDIVVTKDEVDFSQNVQGN--PLIRT 428 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 +E ET + V++GET+ + G+ + + VP L +P LF+ K ++ E +VF Sbjct: 429 KETETNLLVRNGETIVISGLSKQTVSGTEHGVPGLRKVPGLSWLFKGIDKSEDMEEFMVF 488 Query: 404 ITPRLVS 410 ITP ++ Sbjct: 489 ITPTILD 495 >UniRef50_D2QZA3 Type II and III secretion system protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZA3_9PLAN Length = 854 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 101/425 (23%), Positives = 187/425 (44%), Gaps = 36/425 (8%) Query: 8 LLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPW 67 +L ++ A + + V D + +VL+ L++Q LN++ S V+GTV+ L++V Sbjct: 159 VLPTPNSSIETAADDSLHINVKDSDIREVLELLSQQGGLNILASKSVTGTVTATLSNVDL 218 Query: 68 KQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYA 127 + AL ++KS G + R+EGNIL + + + Q L R Y Sbjct: 219 ETALAAILKSTGYVARREGNILYIGTPDDFSTMD----------QTADRLITRVYRPNYV 268 Query: 128 DAGELAKAGEKLLSAK-GSMTVDKRT-------------------NRLLLRDNKTALSAL 167 A ++ K LL+ + G +TV + + +++RD + + L Sbjct: 269 AAADVEKLFTSLLTPEVGKVTVSSPSEIDIPGDQVKTGGNGFAGADVVIVRDYENVIKQL 328 Query: 168 EQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT 227 +Q ++D+ QV + A I+++ +GV + ++ + + L ++ Sbjct: 329 DQVFIEIDVKPRQVLIEAMILSVRLSDNMTMGVNFEALRDKNNVRLVSGSPLTDLANIDL 388 Query: 228 ATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ--V 285 + + L + + ALE ++IASPRL+ + Q A I+ G ++ Y Sbjct: 389 SEGGLKLGFL---DASLAVFIDALETVGDTNVIASPRLMCLNKQRAEIQIGEQLGYVSTT 445 Query: 286 SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQE 345 + S SV F + + + P + G IRL++H + G V + + + Sbjct: 446 VTENSATQSVNFLDVGTLLRLRPNIANDGLIRLEVHPELST-GTVSIEQGLTIPNKTVTQ 504 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 + T V G T+ LGG+ + + +P LG +P G FR + ER E++V +T Sbjct: 505 VTTNVMCADGCTVILGGLIRQDLTNNTSQIPFLGSLPLVGPAFRQKTETQERTEIIVLLT 564 Query: 406 PRLVS 410 PR+VS Sbjct: 565 PRIVS 569 >UniRef50_C8R0C8 General secretion pathway protein D n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0C8_9DELT Length = 690 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 86/357 (24%), Positives = 145/357 (40%), Gaps = 42/357 (11%) Query: 95 AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGS--------- 145 + + + + + L++A A +L + GS Sbjct: 261 DPYHLLRVKATILHLDTPLAKGGDTQVVFLRHAKAEDLVPILTGMGKYDGSREERRGQQR 320 Query: 146 ----MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVK 201 + D TN L++ L L+ + Q+D+ Q+ + A I I+ +LG++ Sbjct: 321 QDVDIQADANTNALIMTGPPAVLQNLQTVIRQLDIRRAQLMIEAVIAEISTARAVDLGIQ 380 Query: 202 WTLADAQHAGGVGQVTTLGSD---------LSVATATTHVGFNIGRINGR---------L 243 W ADA G G+ S+A GFN+G +G Sbjct: 381 WFSADADKVIGGTNFPGSGASMSGIAAGDEGSIAALAGLGGFNMGVFSGSTEILGREFFS 440 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT--------SV 295 ++AL + +I+++P L+ Q A I G +P+ S GAT +V Sbjct: 441 FGALVNALARDGDTNILSTPSLVTMDNQEAEIIVGQNVPFLTGSFTEGATGVGGSPFQTV 500 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 E ++ + + V P V + IRL++ + + A L + + I T V V+ G Sbjct: 501 ERRDVGIKLRVKPQVTEGDVIRLQIEQEVSSVERDDLAAG---LVTNTRNINTSVLVEDG 557 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + L LGG+ + + VPLLGDIP FG LFRH E +R L+VF+ P ++ + Sbjct: 558 KVLVLGGLISDDVQETVSKVPLLGDIPLFGALFRHTRSERSKRNLMVFLRPVILRDQ 614 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 60/169 (35%), Gaps = 8/169 (4%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQAL 71 + + + +TL + + V+ ++A +V P V G +++ + Sbjct: 39 PRPGQAETITLNFKEADIESVINSVARITGKTFIVDPAVRGNITIVSSQPMRADEVYGVF 98 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP-LENRSITLQYADAG 130 ++++ + GN++ + A ++ + + + R LQY A Sbjct: 99 LSILQVHDYAAVEAGNVVKIIPAAKAGQDLVITADAEHPLELEEDRIVTRIYRLQYLQAD 158 Query: 131 ELAKAGEKLLSAKG---SMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 L +L + S K N L+ + + L + V ++D Sbjct: 159 RLVPILRPMLGTRTGQMSALAVKEGNALIFTERAGTVERLLRIVRRLDQ 207 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 10/103 (9%) Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL-- 139 +EGN L + + R R + E +TL++ADA ++ ++ Sbjct: 179 AVKEGNALIF---TERAGTVERLLRIVRRLDQSSGGEMEIVTLEHADARDVVSVIREMEL 235 Query: 140 -----LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 + + + D RTN +LL+ + L ++ + +D P Sbjct: 236 GTGRLSAEQLRLVADSRTNSVLLQGDPYHLLRVKATILHLDTP 278 >UniRef50_A6W2T5 Type II and III secretion system protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2T5_MARMS Length = 393 Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats. Identities = 111/409 (27%), Positives = 201/409 (49%), Gaps = 22/409 (5%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH 61 K+ LL+ G + + + + +VL LA Q ++V+SP++ ++L Sbjct: 3 KRLYYGLLVFFFLGASRVLA--MDVYFESRSLQEVLPWLASQMNESVVISPEIDDVLTLS 60 Query: 62 LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRS 121 + D WK ++ + + + +G++ + + + + ++ + Sbjct: 61 IKDASWKDVMEAIAQLPHIQLEWQGHVAVLMPV--------KTPLADSTEPTSVMCQRAY 112 Query: 122 ITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQV 181 L++A A ++ L S+ VD RTN ++ + T+ +++ + +D P+ Q+ Sbjct: 113 WVLKHAKAKDVGVHLRA-LHPSISLVVDDRTNSIIAH-SCTSFEGIQETLDWLDTPLKQI 170 Query: 182 ELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRING 241 E+SA I ++ + + GV W + GV DL T TT + F+ Sbjct: 171 EISAQIAQVSRTAQSQFGVNWQAKLSD---GVRSSIGGAVDLGALTPTTSLDFS-SIGGS 226 Query: 242 RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAV 301 LL L L +E + ++++ P+++ S PA I+ G+E+PYQ S + S+EF++AV Sbjct: 227 GLLALTLDMMESEGLANVVSKPKIVTSEGLPARIESGTEVPYQTVSDDKV--SIEFRQAV 284 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 L +EVTP V G I L L I Q+ G ++ V ++ ++TQV VK+ ETL LG Sbjct: 285 LMLEVTPFVKDSGHILLSLTIHQDSVGDLV----NGVPSLKTNRLKTQVVVKNQETLVLG 340 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 G+F + + VP DIPW G+LF+ ++ E+ EL+VFITP+L+ Sbjct: 341 GVFREERFESESRVPFFSDIPWLGELFKRQSEQQEKVELLVFITPKLLQ 389 >UniRef50_C4V5Y4 Fimbrial type IV assembly protein pilQ n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V5Y4_9FIRM Length = 428 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 107/447 (23%), Positives = 184/447 (41%), Gaps = 57/447 (12%) Query: 1 MKQWI-AALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS 59 MK+WI A LL L+ VT+ V V VL A A L L+V V+GTV+ Sbjct: 1 MKRWIITAALLGLLLSAAPVSAASVTVDVTGGDVRSVLLAAARMGNLPLIVDDSVTGTVT 60 Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN 119 HLT ++ L + + G+ + G++ + Sbjct: 61 AHLTGE-AEEVLHLIAAARGIHLERHGDVWLALGTEVHDAQR----------------RV 103 Query: 120 RSITLQYADAGELAKAGEKLLSAKG------------------------SMTVDKRTNRL 155 + T++YAD ELA A L+ +G + VD TN L Sbjct: 104 HTYTVRYADPEELAHAANLSLTGEGKRAIVSKPNKDIGESGDQSSDVQRRVLVDTATNTL 163 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLAD-------AQ 208 L ++ A+ + V+ +D QV L A +V +++++ +ELGV W+ + + Sbjct: 164 LFYGTESEAFAVREIVSALDTAPRQVSLEARVVAVSKRAAKELGVDWSWSSLPQYPNVTR 223 Query: 209 HAGGVGQVTTLGSDLSVATATTHVGFNIGRIN---GRLLDLELSALEQKQQLDIIASPRL 265 + G V+ + + +A + F G + AL + + ++A P + Sbjct: 224 DSAGNWHVSGRNAGTAGRSAPGVIRFGRGPEGLPYEFYYSAAIRALITEGKAKMLARPNV 283 Query: 266 LASHLQPASIKQGSEIPYQVSSGESGATS--VEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 + A I G+E+P V + + T+ +E++EA + + TP V G I +H Sbjct: 284 TTVQGREALINIGAEVPVPVVTTSNNVTTTGIEYREAGIILRYTPRVTADGNIVAHVHTE 343 Query: 324 QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPW 383 + P V D + K+ +T V +K+GET+ +GG+ +P LGD+P Sbjct: 344 VSTPVFV---DDLKAYRFQKRSADTTVRLKNGETMVIGGLIDSDESRTLAKIPFLGDLPL 400 Query: 384 FGQLFRHDGKEDERRELVVFITPRLVS 410 G FR EL++F+T ++ Sbjct: 401 LGAFFRTVRTSKNESELMIFLTAHVLD 427 >UniRef50_C1ZJR8 Type II secretory pathway, component PulD n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJR8_PLALI Length = 915 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 99/432 (22%), Positives = 196/432 (45%), Gaps = 49/432 (11%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 PG +K L V+ + +VL+ LA+ +N++ SP+V G V+++L V + AL Sbjct: 340 PGGNVTSDEKFDLQVEQAELPRVLELLAQMAGINILTSPEVVGKVTVNLQGVTLEAALDG 399 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 ++++ G + ++EG+++ V + +AR A+ + + Y + EL Sbjct: 400 LLRTRGYLYQREGDMVFVMTA----------REAEARRLASRKVLTKIYQPNYINVKELQ 449 Query: 134 KAGEKLLSAK-GSMTVDK-------------------RTNRLLLRDNKTALSALEQWVAQ 173 + + +L+ G +++ + + LL++D + ++ +++ + + Sbjct: 450 QLVQPILTPTLGKVSITSPSSVGIAENATDAGGDSLSQRDALLVQDYEEVINEIDRVIIE 509 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGG-VGQVTTLGSDLSVATATTHV 232 MD+P QV + A I+++ GV L G ++ + T + Sbjct: 510 MDIPPLQVIIDAKILSVKLTDDMAFGVNLALLGGDKNLAVTGNGASIATSSGFPGGTGSI 569 Query: 233 ------------GFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSE 280 G G I G + + ALE ++ASP++ A + Q A + G+ Sbjct: 570 IPPGAQFLANTAGLKYGFIAG-DITGFIRALESIADTSLVASPQIRALNKQRAEMIIGNR 628 Query: 281 IPYQVSSGESGAT--SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV 338 + Y+ + S T +V F E+ + + P + G +R+++H ++ + + + Sbjct: 629 LSYKTLAFNSTQTIENVNFLESGTKLIIRPFIAPDGLVRMEVHPERS---RAVINQSTGL 685 Query: 339 LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERR 398 D E+ T V V+ G+T+ +GG+ + ++ D VP+LG IP G FR+ ER Sbjct: 686 PDQDTTEVTTNVMVRDGQTVVIGGLISEESTESIDRVPVLGAIPLVGAAFRNKSSRIERT 745 Query: 399 ELVVFITPRLVS 410 EL+V ITPR+V Sbjct: 746 ELIVLITPRIVD 757 >UniRef50_Q2LVJ8 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVJ8_SYNAS Length = 601 Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 79/364 (21%), Positives = 146/364 (40%), Gaps = 43/364 (11%) Query: 87 NILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG---------- 136 +L + + + + + LQ A A +LAK Sbjct: 208 GMLVITDVESNVQRLLKIITALDSELEKNAIVMHVYPLQNASAEDLAKVLINLQPKETAP 267 Query: 137 -----EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 + LS + DK TN L++ + + L+ + ++D V + A I+ +N Sbjct: 268 GSEKGQPALSRNVQIQSDKATNSLIITASAEDYALLQGLIQKLDSSRPMVYIEALILEVN 327 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATAT---------------------T 230 LG +W +GG G + L T Sbjct: 328 IVKDFNLGTEWRAMHDAGSGGTGSLLFGSGGLGPPAGTYNILPDVTTPATYSSGFTFGIL 387 Query: 231 HVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV----S 286 G +G I + + + A++ + I++ P+LL + A I G +PY + Sbjct: 388 GTGITLGGITFQDIGAMIQAIKSDTDIHILSKPQLLTMDNEEAQIHVGKNVPYATRKETT 447 Query: 287 SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 + +S E+++ + +++TP + +G +R+K++ + QV + + + +K+ + Sbjct: 448 TTNLDYSSYEYRDVGVSLKITPHINSEGFVRMKINQEVS---QVTEDSPTGLPTTNKRAV 504 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 T V +K ET+ +GG+ + G VPLLGDIP G LF+ E+ L VFITP Sbjct: 505 NTTVTIKDSETVVIGGMIGDSTQLGTYKVPLLGDIPVLGWLFKSRSSNREKTNLYVFITP 564 Query: 407 RLVS 410 R++ Sbjct: 565 RVIR 568 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 66/166 (39%), Gaps = 4/166 (2%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHL-TDVPWKQA-- 70 P V VT+ D+V + ++A+ E N ++ V G+V++ + +A Sbjct: 65 PPVNNMGSPGVTIDFDNVEIQTFIKAIGEMTGRNFLIDKQVQGSVTVFSPKQISSDEAYR 124 Query: 71 -LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 Q+V++ G T G ++ + + L R + L++ + Sbjct: 125 VFQSVLEIHGYTTVPSGAVIKILPRKDAREKDIPTFLQDEEGGREDQLITRIVKLKHGNP 184 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 +L K + L++ + + L++ D ++ + L + + +D Sbjct: 185 EDLKKVIDPLVTRDSIVHAYPPSGMLVITDVESNVQRLLKIITALD 230 >UniRef50_C6E2R8 Type II and III secretion system protein n=7 Tax=Geobacter RepID=C6E2R8_GEOSM Length = 870 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 76/425 (17%), Positives = 168/425 (39%), Gaps = 43/425 (10%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG-TVSLHLTDVPWKQALQTV 74 + + +TL D + ++ L++ +N V V V+LHL + ++QA++ + Sbjct: 176 LNLKSNKPITLKFRDAKLKEIFTILSQLSGINFVFDEAVKDVNVTLHLENGSFQQAMELI 235 Query: 75 VKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 L + + + ++ + + L ++ L DA + Sbjct: 236 TGMHKLDKKILNESTIIIYPKTP------------DKVKQYEELFLQTFYLNKLDAKKAV 283 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 +L K + V++ N L+LRD + + + D+P +V L + ++++ Sbjct: 284 NLVRTMLQVK-KIYVNEEANALVLRDKPEVIEVARKILEANDVPDAEVLLEVEVFELSKQ 342 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSV--------------------ATATTHVG 233 + G+ + T+ GS + Sbjct: 343 NAETFGLLLSRYATSMGVTGPGSTSGGSPFLADTLGAVTTTTTGTGTATTSAQPSNLLNV 402 Query: 234 FNIGRING--RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 FN+ NG + + + + + +++P++ + + A G+ +P +S SG Sbjct: 403 FNLRGYNGYLTVPNATFNFGKTLSNGETLSNPKIRVKNREKAKFNVGTRVPITTTSSPSG 462 Query: 292 ---ATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG---EVLAIDKQE 345 + +V++ + + + PT+ + +KL + + V+ I + Sbjct: 463 GGVSVNVQYVDVGVKVNAEPTIQLNNEVAIKLGLEVSSILNEKTIGTDQATTVVTIGTRN 522 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 ++T + +K GET +GG+ + ++ V LLGDIP G LF + + ++ EL++ IT Sbjct: 523 LDTVLSLKDGETSIIGGLIQKTQTDSKNKVFLLGDIPIIGPLFSNTSDKKDKTELLLAIT 582 Query: 406 PRLVS 410 PR+V Sbjct: 583 PRIVR 587 >UniRef50_Q2S975 Type II secretory pathway, component PulD n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S975_HAHCH Length = 561 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 94/470 (20%), Positives = 177/470 (37%), Gaps = 64/470 (13%) Query: 7 ALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVP 66 ALL + ++ + V++ P L + N+VV P V G VSL L +V Sbjct: 68 ALLPTMPAAETMQAAERFDITVNNAPARDFFMGLVKGTGYNMVVHPAVEGAVSLDLKNVT 127 Query: 67 WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE-------- 118 + ++ V + G +++GN+ V Q R A+ + Sbjct: 128 LDEVMEIVQQLYGFEYQRKGNLFKVLPGGVQTRIFQINYLNVKRKGASDIMVSSGQLSNS 187 Query: 119 ----------------------------NRSITLQYADA-GELAKAGEKLLS--AKGSMT 147 +R T +D L + ++ + Sbjct: 188 SGSSSSSSSNNNSNNNSNNSGGGVNAVLSRITTQTDSDFWTALQETLITIVGNEEGRKVV 247 Query: 148 VDKRTNRLLLRDNKTALSALEQWVAQMD-LPVGQVELSAHIVTINEKSLRELGVKWTLAD 206 + +++R + L+A+E+++ + + QV L I+ + E GV W+ D Sbjct: 248 TNGGAGIVVVRATPSELTAVEEYLDKAQLVMQRQVILEVKILEVVLNKGFEQGVNWSYFD 307 Query: 207 A-----QHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIA 261 +G + TLG T G + L L ++ + +++ Sbjct: 308 EFTSKVDASGDPTKSLTLGQTSRSVTNPGLEGVFSAALRINDFTTLLQLLGEQGTVQVLS 367 Query: 262 SPRLLASHLQPASIKQGSEIPYQVSSGESGATS----------VEFKEA--VLGMEVTPT 309 SPR+ + Q A IK G + + + AT+ VE + ++VTP Sbjct: 368 SPRISTINNQKAVIKVGDDEFFVTGIETNDATTTSGTSNLISEVEITPFFSGIALDVTPQ 427 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQ----ADGEVLAI---DKQEIETQVEVKSGETLALGG 362 + + G + L +H + + + A+ VL + +E ++ ++ ++G+ + +GG Sbjct: 428 IGENGDVTLHVHPTVSDVEDQTKTISLGANDLVLPLAFSSVRETDSVIKARNGQVVVIGG 487 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + + Q VPLLGDIP G FR + + ELV+ I P + SE Sbjct: 488 LIRNLTEKTQAKVPLLGDIPLLGHAFRQKRDTELKSELVILIRPIIADSE 537 >UniRef50_B1FCE7 Type II and III secretion system protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FCE7_9BURK Length = 783 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 85/414 (20%), Positives = 169/414 (40%), Gaps = 32/414 (7%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPW 67 M++P + + + VTL + DV + VL L + ++ V+ D+S +++ D Sbjct: 184 TMVLPALNQSLQKPVTLELKDVDIRSVLSILTQTSGVSFVLDKDISPDLRATVYARDTSV 243 Query: 68 KQALQTVVKSAGLI-TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 AL +++++ L + ++ + + L RS L Sbjct: 244 IDALNLILQTSQLERKVLNDTTMLIYPSTE------------EKKKRYDDLVVRSYYLNS 291 Query: 127 ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 AD ++ +++ K SM VD R L++RD +T + + + D+ +V L Sbjct: 292 ADPQKVQDMLRTIVAPK-SMYVDGRLKMLVVRDTETVQDTIVRLLNLYDIASPEVILDVE 350 Query: 187 IVTINEKSLRELGVKWTLADAQ---HAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRL 243 ++ +N L LG+++ + + GV T+G + + + F Sbjct: 351 VLEVNSSDLLNLGIQFPDSVSARMVGPAGVAGSMTIGDLKHLNRDSFPLSF-------PD 403 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS----GESGATSVEFKE 299 L+ + +A+PR+ + + AS+ G ++P S+ + SV + + Sbjct: 404 PLAVLNLRQTSGSTRTLANPRIRVVNHEKASVLIGDKVPVITSTVNQTSNAITESVNYLD 463 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVL--QQADGEVLAIDKQEIETQVEVKSGET 357 L +EV P + + +K+ + + + + I + T + + GET Sbjct: 464 VGLKLEVEPEIHVDNDVTMKVALEVSNIVKEVRSSATGLLAYQIGTRNANTVLRLHEGET 523 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 AL G+ + VP LG IP G+LF ++ R E+V+ ITP + S Sbjct: 524 QALAGLIKNDTQESGTHVPGLGRIPVLGRLFSNNRDTATRSEIVLLITPHIARS 577 >UniRef50_B1Y7J0 Type II and III secretion system protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y7J0_LEPCP Length = 760 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 86/419 (20%), Positives = 170/419 (40%), Gaps = 49/419 (11%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWK 68 + +P +++ + VTL D P+ VL+ALA +N ++ +V S+ + DV + Sbjct: 170 LAVPVLKSRLQKPVTLEFRDAPLKLVLEALARSAGINFIMDREVRPDLKASIFVRDVRVE 229 Query: 69 QALQTVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYA 127 AL ++ + L + N + V+ Q ++ L R+ + A Sbjct: 230 DALDLLIHNHQLEKKILTDNTVLVYPNTPQKLREHQE------------LVMRTFHIGNA 277 Query: 128 DAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 D + +L + + +D+R N L LRD + A E+ +A D +V L I Sbjct: 278 DPKQTLNLLRTMLKVR-DVFIDERVNLLFLRDTPDVIRAAERLIAAQDKADPEVVLELEI 336 Query: 188 VTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDL- 246 + ++ +R+LG+ T S+ + ++ F IG +N R + + Sbjct: 337 LEVSRTKVRDLGI-----------------TYPSEFAGPGSSGAKLFEIGELNRRTIGVD 379 Query: 247 ---ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT---------- 293 +L L +A+PR+ + + A + G +P S+ Sbjct: 380 TGYKLKLLRTDGDTKTLANPRVRVRNREKARVHVGDRVPVISSTIVGTTNLGSNNTPVTT 439 Query: 294 -SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVL-QQADGEVLAIDKQEIETQVE 351 +++ + + +E PT+ + + +++ + G A + + T + Sbjct: 440 EQIQYLDVGIKIEAEPTIYADDSVAISINLDVSSLGNQTRTNAGTTAYEVGTRNASTVLR 499 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 ++ GET AL G+ + +P LG+ P ++F + RELV+ ITP+LV Sbjct: 500 LRDGETQALMGLIRDDDVQTGAGLPYLGEFPVLDRIFGSKRTDRRSRELVLLITPQLVR 558 >UniRef50_C9KL82 Putative type IV pili biogenesis protein PilQ n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL82_9FIRM Length = 430 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 91/422 (21%), Positives = 172/422 (40%), Gaps = 51/422 (12%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 A+ + + V + V VL +LA N+V+ V+GTV+LH T+ P K L+ + S Sbjct: 23 AEAAPIEMQVVEGDVRSVLLSLARTAHENIVLDDSVAGTVTLHATEEPAK-LLRMIAASK 81 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA--- 135 GL+ +EG+ V ++ +A+ +++AD +LA A Sbjct: 82 GLVLIKEGSTYLVTTM----------------PRADALRSVHVYPVRHADPADLAHAAEL 125 Query: 136 -GEKLLSAKG----------SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELS 184 + + K + VD TN +L + + + V Q+D QV L Sbjct: 126 SLKSVAGDKTADGQETGTARRVLVDSATNSVLFYGTAAEAANVAKVVQQLDRKPRQVSLE 185 Query: 185 AHIVTINEKSLRELGVKWTLADA------------QHAGGVGQVTTLGSDLSVATATTHV 232 A ++ +++ + ++LGV+W + + + Q + T + Sbjct: 186 AKVLALSKDASKKLGVEWQWSSLPQYPDFETTYRHKGSANEVQEKEIKRHTQDGTVPGII 245 Query: 233 GFNIGRIN---GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS-- 287 F G + AL + + ++A P + + A I G E+P S Sbjct: 246 QFGRGPEGVPFEFYYSATIQALVTQGKAKMLARPNITTVQGREALINIGGEVPVPTQSVT 305 Query: 288 GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIE 347 + T+ +++A + + TP + + GRI +H + P V D + + + Sbjct: 306 NNTTTTTYTYRQAGIILRCTPRIHEDGRITATVHTEVSSPLYVE---DIKAYRFQNRSAD 362 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 T V ++ GET+ +GG+ +P LGD+P G FR + E+++F+T Sbjct: 363 TTVSLRDGETMVIGGLIGSDESRTLSKIPFLGDLPILGSFFRSVRQSRSESEIMIFLTAH 422 Query: 408 LV 409 ++ Sbjct: 423 VI 424 >UniRef50_B5SC46 General secretion pathway gspd-related protein n=4 Tax=Ralstonia solanacearum RepID=B5SC46_RALSO Length = 761 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 83/400 (20%), Positives = 169/400 (42%), Gaps = 27/400 (6%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQALQTVVK 76 A Q + L D V + +A+A +N ++ DV ++ + + AL ++ Sbjct: 180 AAKQPINLDFRDASVRMIFEAMARSTGINFILDKDVRPDLKTTVFIRQAKLEDALDLILS 239 Query: 77 SAGLITRQE-GNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 + L + G+ + ++ + + L R+ L A+A + Sbjct: 240 TTQLNKKMMNGSTILIYPNTPEKQRDYQ------------DLVVRAFYLTNAEAKQTGAM 287 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 + +L + +D+R N +++R++ + E+ V D +V L ++ ++ L Sbjct: 288 LKTMLKIREP-YIDERANMVVIRESPDVVRLAERLVELQDRNDSEVVLEVEVLEVSSTKL 346 Query: 196 RELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQ 255 +LG+++ + T+L T + G N RI L+ + Sbjct: 347 TQLGIQYPNSFTLTPLSATGATSL-------TLSDFKGLNSDRIGVSTPSAVLNLRRELG 399 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGMEVTPTVLQ 312 D++A+P++ A + + A I G ++P ++ S + SV++ + L +EV P++ Sbjct: 400 DTDLLANPKIRAKNHEKAKILIGDKLPVITTTSTSTGFVSESVQYIDVGLKLEVEPSISP 459 Query: 313 KGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 + +K+++ + + G V I + T +++ GET L G+ + S Sbjct: 460 DDEVSMKINLEVSSLTNQITTRSGTVAYQIGTRSANTVLKLHDGETQLLAGLIKTQQTSS 519 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +P LGDIP G+LF R E+V+ ITPR+V Sbjct: 520 AARIPGLGDIPLLGRLFSSQTDNGVRNEIVLSITPRVVKP 559 >UniRef50_A1WTW1 Pilus (MSHA type) biogenesis protein MshL n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTW1_HALHL Length = 538 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 91/448 (20%), Positives = 173/448 (38%), Gaps = 52/448 (11%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 P + + + D V + L E N+VV PD+ G +SL L DV + + T Sbjct: 74 PLALQPEDPRFDITADGVGAREFFHGLVEDTPYNVVVHPDLEGELSLTLRDVSVPEVMDT 133 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN-------------- 119 V + G +Q + + R+ + Sbjct: 134 VREIYGYEYKQARTGFLILPARPRAEVFHLDYLNVHRSGHSGTRVTSGEITGEDDGDGVI 193 Query: 120 --RSITLQYADA-GELAKAGEKLLSAK--GSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 R T +D G++ + +++ S+ + L +R +L +E +V ++ Sbjct: 194 GSRVDTASNSDLWGQVEETVSRMIDDDDTASVVASPQAGTLAVRGMPESLRRVEAFVDRL 253 Query: 175 D-LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVG 233 QV L A I+ + + G+ W + G +L +++A Sbjct: 254 QGSLNRQVILEARILEVELGDDFQAGISWESLGRHDGQALEGSFRPGDNLELSSAGV--- 310 Query: 234 FNIGRING-----RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV--- 285 FNIG G + L ALEQ+ + ++++P++ + Q A IK G++ YQ Sbjct: 311 FNIGITRGQDGQRGFFEGFLRALEQQGDVQVLSTPQVSTLNNQKAVIKAGTDSFYQTDFS 370 Query: 286 ----SSGESGATSVE------FKEA--VLGMEVTPTVLQKGRIRLKLHISQNVPGQVL-- 331 + G T+ + F+ + ++VTP + + G I L + S + Sbjct: 371 INYRTVEVGGQTTTQPELDPDFEPFFSGIALDVTPQIEESGWINLHVQPSVTEVRERERT 430 Query: 332 --QQADGEVLAID-----KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWF 384 + + ++ ++ V +SGE + +GG+ + + VPLLG +P Sbjct: 431 LRTGRGDDEVRFSLAESDVRQSDSIVRARSGEMIVIGGLIEEREQQETSRVPLLGRVPLL 490 Query: 385 GQLFRHDGKEDERRELVVFITPRLVSSE 412 G LF + +E + ELV+ + PR+V + Sbjct: 491 GWLFTQERQESSKYELVILLRPRVVGED 518 >UniRef50_Q2Y5U9 Type II and III secretion system protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y5U9_NITMU Length = 749 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 83/409 (20%), Positives = 174/409 (42%), Gaps = 23/409 (5%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQAL 71 P ++ A + +TL D + V + LA +N+V DV ++ + + + Sbjct: 173 PILKTAFKKPITLEFRDTGLKSVFEILARTGGINVVFDKDVKQDSKTTIFVRETNIEDVF 232 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 + ++ + L +L+ +S+ N A+Q+ Q L RS + D + Sbjct: 233 KLLLVTNQLA----HKVLNENSVLIYPNTPAKQKEYQ-------ELMVRSFFVTNTDVKQ 281 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 + + L+ K M VD++ N +++D A+ E+ V DL +V L ++ I Sbjct: 282 MVAMVKGLIKTK-DMHVDEKLNLFVMKDTPEAIRLAERLVTLNDLADPEVMLEVEVLEIG 340 Query: 192 EKSLRELGVKWT---LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRING--RLLDL 246 L LG+++ + A G N+ + G L Sbjct: 341 RNKLLNLGLQYPEKINVNYLTAASAAGAAPFPPFQISRAGVNGNGSNLDNLIGFVANPAL 400 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLG 303 ++ +Q ++++A+PR+ + + A + G ++P ++ + A+SV + + L Sbjct: 401 IVNLKQQDGLINVLANPRIRVKNREKAKVLIGDKVPVVTTTAAANVGVASSVSYLDVGLK 460 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPG-QVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 ++V T+ + + +K+ + + +V G + + T + +K GET L G Sbjct: 461 LDVESTISLQDEVSMKVSLEVSNIVKEVPVTGGGLAYQVGTRTAATTLALKDGETQVLAG 520 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + ++ VP L ++PW G+LF + + E+ + ITPR+V + Sbjct: 521 LISDDERTTLSKVPGLAELPWIGKLFINKNVVRNKTEIALLITPRIVRN 569 >UniRef50_B1Y7C9 Type II and III secretion system protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y7C9_LEPCP Length = 662 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 86/410 (20%), Positives = 177/410 (43%), Gaps = 35/410 (8%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV--SLHLTDVPWKQAL 71 G++AA + VTL D V V +AL+ +N+++ DV + ++++ + + L Sbjct: 180 AGLEAAFKRPVTLQFRDANVKMVFEALSRTANINIILDRDVRADLRTTIYVQNASVEDTL 239 Query: 72 QTVVKSAGLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 ++ L R GN + V+ L+ R+ L +A Sbjct: 240 DLILLQNQLDRRVLNGNTIFVYPATPAKQR------------EYNELKVRTFQLSNIEAA 287 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 ++A + +L + + D ++N L++RD +++ E+ +A D+P +V L ++ + Sbjct: 288 QMATIIKTMLKTR-DVVTDAKSNSLVMRDTAASIAVAEKLIAANDVPDPEVVLEVQVLEV 346 Query: 191 NEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSA 250 + L +G+++ T+G+ + T + L L L+ Sbjct: 347 SSDRLSNIGLRFP-----------DAFTVGTPSTATTVGDLRALTSDNLTASSLSLGLNL 395 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV--------SSGESGATSVEFKEAVL 302 L Q +I+ASPR+ A + + A I G ++P S+++ + + Sbjct: 396 LLQDTDTNILASPRIRARNKEKARILVGDKVPVITNLITPQQSGQSSVITGSIQYVDVGI 455 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 +EV P V G + +K+++ + + + + G I + T + + GET + G Sbjct: 456 KLEVEPQVYADGDVGIKVNLEVSNIAKTITTSSGVAYQIGTRNATTALRLHDGETQMMAG 515 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + +++S +P LG +P G+LF + E+V+ ITPR+V + Sbjct: 516 LINDQDRSTASKLPGLGQLPVIGRLFTSTNASGGKSEIVLSITPRIVRPQ 565 >UniRef50_Q2BKX4 Putative MSHA biogenesis protein MshL n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKX4_9GAMM Length = 524 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 83/437 (18%), Positives = 171/437 (39%), Gaps = 41/437 (9%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTV 74 A+ ++ + + +P L + N++V V G +SL L DV + +Q V Sbjct: 68 SPAASADERFDITAEALPAKDFFMGLVQGTAYNMIVHEAVGGNISLELKDVSVDEVMQAV 127 Query: 75 VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQAR-------------------AQANL 115 + G + GN+ V + Q + R A Sbjct: 128 QRVYGYEYNRTGNLYQVLPASLQTEIFQINYLDIQRDGTSDTQVSAGSVSNSGDNASGEE 187 Query: 116 PLENRSITLQYADA-GELAKAGEKLLSAKGS-MTVDKRTNRLLLRDNKTALSALEQWVAQ 173 + R T + G L + +++ +G + V +T +++R + L+ + +++Q Sbjct: 188 VIGTRISTKTSTNFWGGLQETLNTIVTGEGRKVVVTPQTGVVVVRALPSELATVRDYLSQ 247 Query: 174 MD-LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHV 232 + + QV + A I+ + + + GV W++ +G T L+ A Sbjct: 248 AELILHRQVVIEAKILEVTLNNGFQAGVNWSILGEPGSGNTANFTQSSVGLTNQDAIG-- 305 Query: 233 GFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY--------Q 284 G ++ + L + + +++SPR+ + Q A IK G++ + Sbjct: 306 GIFKADLSIGDFSAVIELLGSQGDVQVLSSPRVSTVNNQKAVIKVGTDEFFVTEVENTTT 365 Query: 285 VSSGESGATSVEFKEA--VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAID 342 + + + S+E + ++VTP + G I L +H + + +Q + Sbjct: 366 TGTSTTTSPSIELTPFFSGIALDVTPQISANGDIVLHIHPTVSEVVDQQKQISVGTDDFN 425 Query: 343 -------KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 +E ++ V +SG+ + +GG+ + Q P LGDIP G LF+ + Sbjct: 426 IPLALSSIRESDSIVRAESGQVIVIGGLMKSSDSDTQAKTPGLGDIPGVGNLFKQKRQAG 485 Query: 396 ERRELVVFITPRLVSSE 412 + ELV+ + P L + + Sbjct: 486 SKTELVIMLRPVLANHD 502 >UniRef50_A3ERG1 Putative general secretion pathway protein D n=2 Tax=Leptospirillum sp. Group II RepID=A3ERG1_9BACT Length = 555 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 84/451 (18%), Positives = 176/451 (39%), Gaps = 49/451 (10%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS-LHLTDVPWK 68 + PQ V+L +V ++ +++ +++ + N+V+ V G V+ L V Sbjct: 49 PLPTTLPAPLTPQTVSLNFRNVDISVMVKFMSDLLEKNIVMDERVKGKVTILSPRPVTIP 108 Query: 69 QALQT---VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQ 125 +A + ++ G T ++ ++ + + A + + L Sbjct: 109 EAFRVFVQALRMKGFETVEKKGMIFIVPQNQAPMDRELFLYNLENTSAKSVAKTVNSILS 168 Query: 126 YA-DAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELS 184 + + L A + D +N LL+ S ++ + +D G+V + Sbjct: 169 KGFTPQPVGSIRQGGLEAPVQIVPDIPSNSLLVSATMNDYSIIKGLLRSLDRQPGEVYVK 228 Query: 185 AHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL------------------------- 219 A ++ I+ L + V A A + G G + Sbjct: 229 ASLIEISTDKLNNIQVNLLGAVATGSNGAGVLGGTNYGMVGDVVNGATGADATTSTTGAP 288 Query: 220 -------------GSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLL 266 G +A T FN G +N + L+AL+ + +++P +L Sbjct: 289 VATGAAGAAQSLTGLTGLIAGVLTGGSFNYGGVNYPSIGTLLNALQTDSDVKTLSTPEIL 348 Query: 267 ASHLQPASIKQGSEIPYQVSSGESGA----TSVEFKEAVLGMEVTPTVLQKGRIRLKLHI 322 A+ Q A I G ++P+ ++ T ++ + + +++TP +L R+RL L Sbjct: 349 ATDSQKAKITVGEDVPFITGQSQTVGGNVMTMIQRQNVGITLDITPHILAHDRVRLNLKQ 408 Query: 323 SQNVPGQVLQQADGEV--LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGD 380 + Q K+ +T + V+SG+T+ +GG+ + + + ++P LG+ Sbjct: 409 TITALTNASQLIGTMAVGPTTTKRSTKTILTVRSGQTVVIGGLISSEKSLNKSTIPWLGE 468 Query: 381 IPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 IP G LF E +R +L++F+TP ++ + Sbjct: 469 IPVLGYLFSSTQNEKKRDDLLIFLTPYIIRN 499 >UniRef50_B5JVD5 General secretion pathway protein D n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVD5_9GAMM Length = 694 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 78/439 (17%), Positives = 172/439 (39%), Gaps = 63/439 (14%) Query: 33 VAQVLQALAEQEKLNLVVSPDVSGTV-SLHLTDVPWKQALQTV------------VKSAG 79 + ++ + + + + S+ L + ++ + V + Sbjct: 177 ITDRASNISRLADIIGRIDRPDNDEIESIQLEHASAPELVRIINSLSQGGNKGAEVDTPQ 236 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 L + N + + S + + ++ + + L+YA A ++A+ + + Sbjct: 237 LAADERTNSILI-SGSKAARDRIKKLIASMDTPLEQGGNTKVVYLKYAKAEDMAEILKGV 295 Query: 140 ---------------------LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 + + D TN L++ AL +E V Q+D+ Sbjct: 296 NEGQKKAAEAAGGKAAAATVSSDKEVDIQADPGTNSLIITAAPDALRNIESVVRQLDIRR 355 Query: 179 GQVELSAHIVTINEKSLRELGVKWTLADAQH-------------------AGGVGQVTTL 219 QV + A IV +++ + RELG + A+ G+ +T Sbjct: 356 AQVHVEAIIVEVSDTAARELGFSYLFANENGFDNETNPVGGALLGGGGDVINGIAAASTG 415 Query: 220 GSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 + VGF +G + L A+ + +++++P ++ + A I G Sbjct: 416 DGSGASVPNGFTVGFGDRDNSGNVFAGILRAVASDTEANLLSTPSIVTLDNEEAEIVVGQ 475 Query: 280 EIPYQVSSGE-------SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQ 332 +P+ S + +VE ++ + +++TP + + IRL + + + Sbjct: 476 NVPFVTGSYTTASSGANNPFQTVERQDVGVTLKITPQINEGDVIRLDIEQEASSVVESSV 535 Query: 333 QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 + + +K+EI+T V ++ G+ L LGG+ + + VPLLGDIP G+LF++ Sbjct: 536 ASGQLI--TNKREIKTSVMIEDGQMLVLGGLIDDQTRKSLFKVPLLGDIPLLGRLFQYRT 593 Query: 393 KEDERRELVVFITPRLVSS 411 +++R L+VF+ P+++ Sbjct: 594 NSNDKRNLMVFLHPKILRD 612 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 64/167 (38%), Gaps = 6/167 (3%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDV----PWKQA 70 QAA + TL + D + ++ +A++ N V+ P V V++ + + Sbjct: 33 PAQAADEESFTLNLKDADIEALISTVAKKTGRNFVIDPRVKARVTVISSQAMSGNELYEV 92 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 Q++++ G G+++ + L + I ++ A Sbjct: 93 FQSILQVHGYAAVPAGDVIKILPEVNAKQGAVPTITNGQ--GMGDDLVTQVIPIRNVAAA 150 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 +L L+ +G + +N +++ D + +S L + ++D P Sbjct: 151 QLVPILRPLVPQQGHLAAYSGSNIIVITDRASNISRLADIIGRIDRP 197 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 13/132 (9%) Query: 60 LHLTDVPWKQ---ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + + +V Q L+ +V G + G+ + V + N + + N Sbjct: 142 IPIRNVAAAQLVPILRPLVPQQGHLAAYSGSNIIVITDRASNISRLADIIGRIDRPDNDE 201 Query: 117 LENRSITLQYADAGELAKAGEKLLSAK--------GSMTVDKRTNRLLLRDNKTALSALE 168 + SI L++A A EL + L + D+RTN +L+ +K A ++ Sbjct: 202 I--ESIQLEHASAPELVRIINSLSQGGNKGAEVDTPQLAADERTNSILISGSKAARDRIK 259 Query: 169 QWVAQMDLPVGQ 180 + +A MD P+ Q Sbjct: 260 KLIASMDTPLEQ 271 >UniRef50_A7BV51 Bacterial type II and III secretion system protein n=1 Tax=Beggiatoa sp. PS RepID=A7BV51_9GAMM Length = 442 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 71/364 (19%), Positives = 134/364 (36%), Gaps = 49/364 (13%) Query: 95 AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA------------ 142 R + + I L+YA+A +L + + + Sbjct: 37 DKITRLRLRTMITHLDTPVKSIGDTQVIYLRYAEAKDLVNVLKGISDSLVENQKKKGKSP 96 Query: 143 ----KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 K ++ D+ TN L++ L+ + Q+D+ QV + A I I+ + REL Sbjct: 97 SPEIKTNIQADESTNSLVITATPKVQQNLQTVIRQLDIRRAQVLVEAVIAEISTDTAREL 156 Query: 199 GVKWTLADAQHAGGVG--------------------QVTTLGSDLSVATATTHVGFNIGR 238 GV+W L + G + L A +G Sbjct: 157 GVQWLLYGNKGTAPFGLSNFDNSGTRIADLASAGYLANNNSSTSLPNIGAGAFLGLGRFN 216 Query: 239 INGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES-------- 290 + + L AL +++++P LL Q A I G +P+ + Sbjct: 217 NSFLNFGVLLRALASDTNTNVLSTPSLLTLDNQEAEIVVGQNVPFVTGQYTNTGTSGGGG 276 Query: 291 ---GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIE 347 +++ ++ + + V P + + ++L++ + + Q V +K+ I+ Sbjct: 277 VTNPFQTIQREDIGIKLRVKPQINEGNAVKLEIEQEVSSLSRSSQATTDIV--TNKRTIK 334 Query: 348 TQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPR 407 T V V+ G + LGG+ + VP LGD+P G LFR + +R L+VF+ P Sbjct: 335 TTVIVEDGNMVVLGGLIDEDLQQTAQKVPGLGDLPIIGHLFRSRSTQKIKRNLMVFLHPV 394 Query: 408 LVSS 411 ++ Sbjct: 395 IIRD 398 >UniRef50_Q1NKF6 Type II and III secretion system protein:Secretin/TonB, short-like n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NKF6_9DELT Length = 557 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 88/476 (18%), Positives = 177/476 (37%), Gaps = 69/476 (14%) Query: 6 AALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDV 65 +L PG + P++ + V V L N+VV P VSG++SL+L DV Sbjct: 58 TSLAPPFDPGSPSPGPERFDIDVQGVEAQTFFMNLVRGSSQNMVVHPGVSGSISLNLRDV 117 Query: 66 PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN------ 119 ++ L TV G RQ ++ Q+ + +R + + Sbjct: 118 TLREVLDTVRDVYGYDFRQTSAGWQIYPATLQSRMFRIDYLDVSRDGRSDSRVSSGTLTE 177 Query: 120 ---------RSITLQYADA-GELAKAGEKLL---------SAKGSMTVDKRTNRLLLRDN 160 + T AD +L + + ++ S + V+ ++ +++R Sbjct: 178 DGGAGSSGSQITTTSQADFWRDLESSLQMIVGTDRGREDGSQARQVIVNSKSGLVMVRAL 237 Query: 161 KTALSALEQWVAQM-DLPVGQVELSAHIVTINEKSLRELGVKWTLADAQH---------- 209 L +E ++ + + + QV L A I+ + + G+ W Sbjct: 238 PGELREVETFLDALLENALRQVMLEAKIIEVELDEAFQSGINWGKLATSGRDTLKLGQIG 297 Query: 210 ------------AGGVGQVTTLGSDLSVATATTHVGFNIG---RINGRLLDLELSALEQK 254 AG G ++ + T T+ G ++ + L+ + Sbjct: 298 GGTVLDDGVSAIAGNTGNLSADNYNPIDGTTTSAFGGVFTLATSLDHSSFHAFIELLKTQ 357 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS---------VEFKEA--VLG 303 + +++SPR+ ++ Q A IK G++ + S T+ +E + Sbjct: 358 GDVHVLSSPRVATTNNQKALIKVGNDEYFVTDVSFSTRTTGTDDTIYPDLELTPFFSGIA 417 Query: 304 MEVTPTVLQKGRIRLKLHISQNVP-----GQVLQQADGEVLA--IDKQEIETQVEVKSGE 356 ++VTPT+ + L + S + + + +E ++ V +SG+ Sbjct: 418 LDVTPTITDGNEVILHIRPSVSQVRDQTKSFTVAGQTQSLPLALSRMRESDSIVRARSGQ 477 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + +GG+ + + +P LGD+P G LFR + ELV+ + P +V++E Sbjct: 478 VIIIGGLMEDSWREQRAGLPGLGDLPLVGNLFRQQRWSQRKTELVILLRPVVVTNE 533 >UniRef50_A3YCA1 General secretion pathway protein D n=1 Tax=Marinomonas sp. MED121 RepID=A3YCA1_9GAMM Length = 616 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 73/342 (21%), Positives = 138/342 (40%), Gaps = 25/342 (7%) Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA-------- 142 + N + + A + I LQYADA ++A + ++ Sbjct: 236 ILKGKPGELNQIKDLIIKLDIPAEKTSRLQYIPLQYADATKVADLLKGVVGDIEKKEGNA 295 Query: 143 ---KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 + ++ D+ N LL+ +S + + Q+D+P QV + A IV I ELG Sbjct: 296 PTLETNIQADEDLNALLVNSEPGVMSEIYSVLKQIDVPRAQVLIEAVIVEITVTDEEELG 355 Query: 200 VKWTLADA-------QHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALE 252 V+W + + T+ S ++ +TA T + + AL+ Sbjct: 356 VQWLIGGSDEIISGTNFTSAGSSANTIASSINSSTANTLATGGTAILGDTNFGAIIQALQ 415 Query: 253 QKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS----SGESGATSVEFKEAVLGMEVTP 308 K +++++P++L Q A I G P+Q +S + ++ L ++VTP Sbjct: 416 SKTNSNLLSTPKILTLDNQEARILVGETRPFQTGEYSEDSDSTFVTTSREDVGLTLKVTP 475 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 + +++++ + +E+ET V +T+ LGG+ Sbjct: 476 HINSGNEVKMEVFQTVESASDEASDLGT---ITTVREVETVVIAGDRQTIVLGGLIQDNI 532 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 + VP LGD+P+ G LFR +++ L+VFI P ++ Sbjct: 533 TESKQKVPFLGDLPFVGGLFRSSSFSIDKKNLLVFIRPTIIR 574 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 65/179 (36%), Gaps = 8/179 (4%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH 61 +Q + ++ + + A + + + ++ ++ +AE + +V P V G V++ Sbjct: 7 RQLLKLIVSLCMLIPLLAIGKTWQVNLQQADISIFIRQVAEMTDRSFIVDPRVKGKVTV- 65 Query: 62 LTDVPWKQ-----ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 +++ + +V+ G + + + Sbjct: 66 ISNASLDEDAVFRLFLSVLTVHGYAVLESPEGFKILPQNIAKQGGLNFDPSGGAPGEL-- 123 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + R + ++ A A EL L+ G + N L++ D+ + +LE V ++D Sbjct: 124 MVTRVLAIKNAVAAELVPILRPLIPQYGHLAAVPTMNALIISDHADNIRSLEDLVERLD 182 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 21/158 (13%) Query: 38 QALAEQEKLNLVVSPDVSGT--VS--LHLTDVPWKQ---ALQTVVKSAG-LITRQEGNIL 89 Q +A+Q LN S G V+ L + + + L+ ++ G L N L Sbjct: 103 QNIAKQGGLNFDPSGGAPGELMVTRVLAIKNAVAAELVPILRPLIPQYGHLAAVPTMNAL 162 Query: 90 SVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL--------- 140 + + +NI E R + + E I L++A AG++ ++L Sbjct: 163 II---SDHADNIRSLEDLVERLDSTIEGEMAVIPLKHAWAGDVITLLQELTTTTTGKGAR 219 Query: 141 -SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 S ++ D+RTNRL+L+ L+ ++ + ++D+P Sbjct: 220 SSDVTTIVADERTNRLILKGKPGELNQIKDLIIKLDIP 257 >UniRef50_C1TME7 Type II secretory pathway, component HofQ n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TME7_9BACT Length = 570 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 95/411 (23%), Positives = 178/411 (43%), Gaps = 34/411 (8%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQALQTVVKSA 78 +++++ V + V + LA+ K+N+V+ P V+ +++ + P ++ +++ Sbjct: 162 NRRISVDFRSVDIQDVFRMLADMMKVNIVLDPSVAEIPPLTMRFDEAPLREVFGYLMRLY 221 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 GL + G L + S + + + + R + Y+D L Sbjct: 222 GLSYAKVGKTLVIGSPEGISKVMGEE-------------KTRVYDVAYSDVKTLPDMLGG 268 Query: 139 LLS-AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 L + K +TVD+R RL ++ ++ LS E+ + +D P QV L A I+ I +++ E Sbjct: 269 LTTIPKEKITVDERLGRLFVKGSENQLSDFERVLQTVDDPGKQVMLRARIIEIKDEASDE 328 Query: 198 LGVK--------WTLADAQHAGGVGQVTTLGSDLSVATATTHVGF---------NIGRIN 240 L W + A G + T G +IG Sbjct: 329 LETMLNAVYKHWWLSTSSSGAEGGYSYVKDPDSYNPPTGEDRPGGIEFPGIEIPDIGTGG 388 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA 300 RLLD L AL + ++A+P ++ Q ASIK + Y + ++G + +E Sbjct: 389 IRLLDTGLKALVTANKGKVLANPSVITVSGQKASIKLVENLKYISARDDAGNPTYSDEEV 448 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVP-GQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 +E TP V + G I ++L I+ E ++E+ T + V+ GE Sbjct: 449 GPKLEFTPLVGRDGVISVELSIATGEVIAWKEGNQGEEFPQTSEREVVTSIRVRDGEPFV 508 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +GG+F ++ +P+LGDIP G+ F+ K D+R E+V+ + P +++ Sbjct: 509 VGGLFNERHTENTTKIPILGDIPLLGEFFKSKSKTDDRTEVVMVVIPYILN 559 >UniRef50_B1J7E4 General secretion pathway protein D n=2 Tax=Pseudomonas RepID=B1J7E4_PSEPW Length = 745 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 81/374 (21%), Positives = 142/374 (37%), Gaps = 23/374 (6%) Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPL--- 117 + ++ + + + G + SV + + Q + Sbjct: 346 DVRNMKAADLARYLRQIYGSGQINDDKAASVAPGLKTTSLTSLNGTGSQSGQGLSGMGMN 405 Query: 118 ENRSITLQY------------ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALS 165 SI A + E A K L +T K +N+LL+R Sbjct: 406 TQASIREAPSEDDYEDTGQPEASSAESADGSVKSLEESVRITAQKSSNQLLVRTRPAQWK 465 Query: 166 ALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW---TLADAQHAGGVGQVTTLGSD 222 +E + ++D P QV++ I+ + +LGV+W LA + V + Sbjct: 466 EIESAIKRLDSPPLQVQIETRILEVKLTGDLDLGVQWYLGRLAGNSSSTTVANESGSQGA 525 Query: 223 LSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 L L + L ALE + ++++P L+ + Q A I+ G IP Sbjct: 526 LGAGGVALGSASMFYSFVSSNLQVALRALETRGLTQVLSAPSLVVLNNQQAQIQVGDNIP 585 Query: 283 Y-----QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE 337 S ++ +SVE+ + + ++V P + G + + + + Sbjct: 586 ISQTTVNTSDSDTTLSSVEYVQTGVILDVVPRINPGGLVYMDIQQQVSDADDSAVTTTQP 645 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 I + + TQV V+SG+T+ LGG+ + N VP L IP G LF K +R Sbjct: 646 NPRISSRAVSTQVAVQSGQTVLLGGLIKQDNGQSDTRVPGLSSIPGLGWLFGSTSKSRDR 705 Query: 398 RELVVFITPRLVSS 411 EL+V ITPR+V++ Sbjct: 706 TELIVLITPRVVNN 719 Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 7/169 (4%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQA 70 P + + D P+ V+ + + N +S V G+VS + V +QA Sbjct: 94 TPPAAKDEQGDIVFNFTDQPIEAVINSVMGDLLHENYSISQGVKGSVSFSTSKPVTKQQA 153 Query: 71 L---QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYA 127 L +T++ ++G + + + AQ L R L+Y Sbjct: 154 LSILETLLSWTDNAMIRQGERYVILPADKAVA--GKLVPQVPVAQPATGLAARLYPLRYI 211 Query: 128 DAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 A E+ K + + + VD N + L L+ + + D+ Sbjct: 212 GASEMQKLLKPFVRENAFLLVDPARNVISLAGTPDELANYQDTIDTFDV 260 >UniRef50_Q31J27 Type II secretion pathway protein D n=2 Tax=Gammaproteobacteria RepID=Q31J27_THICR Length = 703 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 86/416 (20%), Positives = 153/416 (36%), Gaps = 67/416 (16%) Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEGNIL-------SVHSIAWQNNNIARQEAEQARAQ 112 + L+ ++ + + K ++ N+ + S R Sbjct: 193 IKLSHASAEEMMLVIKKVMSKSANKQFNVSFDERSNRVILSGDQDTRREMRALIADLDVS 252 Query: 113 ANLPLENRSITLQYADAGELAKAGEKL--------------------------------- 139 + I L YA A EL +K+ Sbjct: 253 VPSEGRVQVIYLHYAKAAELVPVLQKIATNRSLLSSVSSDAKTSEATIPDATGNGVQVNQ 312 Query: 140 -----LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 L ++ S+ ++R N +++ +S L+ + Q+D+ QV + A +V + E Sbjct: 313 LDDKTLKSRISIEAEERMNAIIISAPPGVVSVLKTVIKQLDIRRAQVLIEAILVEVTETK 372 Query: 195 LRELGVKWTLADAQHAG----------GVGQVTTLGSDLSVATATTHVGFNIGRINGRLL 244 ELGV+W A G +G + + + F +G Sbjct: 373 QAELGVEWGAAGPNGVGLINFSGTIPTIIGNAGNPAAQANAIGTGVNAAFGEVSADGTGW 432 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE---------SGATSV 295 + AL + +I+++P LL + A I G E+P+Q S + ++ Sbjct: 433 GALIRALNSDSEANILSTPTLLTLDNEEAEIVVGKEVPFQTGSYTSTGTSSTPTNPFNTI 492 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 E K L ++VTP + + + L+++ + D K++I+T+V V G Sbjct: 493 ERKNVGLSLKVTPQINEGDEVFLEINQEISDVIPKGDAVDV---QTSKRQIKTRVIVGDG 549 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + LGG+ T K + VP LGDIP G LFR E E+ L+VF+ P +V Sbjct: 550 NVIVLGGLLTEKETEVEKKVPGLGDIPGLGALFRSTSNEREKVNLMVFLRPVIVRD 605 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 71/164 (43%), Gaps = 10/164 (6%) Query: 19 AKPQKVTL--MVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQALQ 72 ++ ++VTL + +V++A+A+ N ++ P V G V+L + + L Sbjct: 25 SQSEEVTLKQNFQQADIEKVIEAVAKLTGKNFIIDPRVKGKVTLIAPEAMPPEDLYETLL 84 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 ++ G + + + + Q + + IT++ A +L Sbjct: 85 AILHVHGYVAIPGKTAIQIIPANLARD----QVPYENPSAQQSDWVTEVITIEKVPATKL 140 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 L++ +G + +NR+++ D+++ ++ L+Q + ++D+ Sbjct: 141 VAVLRPLVAREGHLVALSESNRMIVTDSQSNIARLKQVIKRVDV 184 Score = 50.9 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 15/219 (6%) Query: 54 VSGTVSLHLTDVPWKQALQT----VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQA 109 V+ +++ VP + + V + L+ E N + V +NIAR + Sbjct: 126 VTEVITI--EKVPATKLVAVLRPLVAREGHLVALSESNRMIV---TDSQSNIARLKQVIK 180 Query: 110 RAQANLPLENRSITLQYADAGELAKAGEKLLSAKGS----MTVDKRTNRLLLRDNKTALS 165 R + I L +A A E+ +K++S + ++ D+R+NR++L ++ Sbjct: 181 RVDVDESSGYEVIKLSHASAEEMMLVIKKVMSKSANKQFNVSFDERSNRVILSGDQDTRR 240 Query: 166 ALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSV 225 + +A +D+ V E ++ ++ EL + + + + Sbjct: 241 EMRALIADLDVSVPS-EGRVQVIYLHYAKAAELVPVLQKIATNRSLLSSVSSDAKTSEAT 299 Query: 226 ATATTHVGFNIGRINGRLLDLELSA-LEQKQQLDIIASP 263 T G + +++ + L +S E++ II++P Sbjct: 300 IPDATGNGVQVNQLDDKTLKSRISIEAEERMNAIIISAP 338 >UniRef50_B9XBV8 Type II and III secretion system protein n=1 Tax=bacterium Ellin514 RepID=B9XBV8_9BACT Length = 612 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 97/440 (22%), Positives = 171/440 (38%), Gaps = 66/440 (15%) Query: 26 LMVDDVPVAQVLQALAEQEKLNLVVSPDV-------------SGTVSLHLTDVPWKQALQ 72 +++D+VP+ ++ LA Q LN ++ P + VSL ++ QAL Sbjct: 134 IVMDEVPLTDAIKNLARQAGLNYMLDPKINYGVAGPDGKLNPQPMVSLRWENLTADQALN 193 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 V+ + L + A PL R I L+YA+ + Sbjct: 194 AVLGNYNLTIVDDPRT-------------KIARITVKDPAAPEPLVTRVIQLKYANVTNI 240 Query: 133 AKAGEKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 +L + + D RT++L++ L+A+++ VA++D QV + A +V + Sbjct: 241 VLNVTGVLQDKRSRVAADVRTSQLVVLATDRELTAVDELVAKLDTATKQVLIEARLVETS 300 Query: 192 EKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHV------------------- 232 + GV WT A G + L + + T T Sbjct: 301 KNPTTAKGVDWTGTAAAQNVRFGNNSILAAPFTRGTPPTPANPFGTPDQQAVPSTILDPT 360 Query: 233 ----------GF--NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSE 280 GF N +N LS L ++++PR + + A++ Sbjct: 361 QPMIAANTHNGFLPNTFFLNADGASAVLSFLNTDNDAQVLSTPRAVTLDNETATLSVTRA 420 Query: 281 IPYQVSSGES----GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV----LQ 332 P ++ + G + V + ++VTP + I L++ + + Sbjct: 421 QPIFKTTAGTQGSPGGSEVTYTNVGTILKVTPRISANKMISLRVIPEVSSVAGTDRKIVS 480 Query: 333 QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 E D + I+TQV + SG TL +GG+ + VPLLGDIP+ G FRH+ Sbjct: 481 GQINEADIFDVRHIDTQVLIPSGNTLVMGGLVSDDRTKSYIKVPLLGDIPYLGAAFRHES 540 Query: 393 KEDERRELVVFITPRLVSSE 412 K ++ L++F+TP +V +E Sbjct: 541 KTQNKKNLIIFVTPTIVETE 560 >UniRef50_P31701 General secretion pathway protein D n=27 Tax=Enterobacteriaceae RepID=GSPD_PECCC Length = 650 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 82/384 (21%), Positives = 154/384 (40%), Gaps = 35/384 (9%) Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 L + K AL ++ + + + + + +Q Q + + Sbjct: 204 ELNKMDEKSALPGMLTANVVADERTNSAAGFG--EPNSRQRVIDMVKQLDRQQAVQGNTK 261 Query: 121 SITLQYADAGELAKAGEKL--------------LSAKGSMTVDKRTNRLLLRDNKTALSA 166 I L+YA A +L + + L S+ ++TN L++ + Sbjct: 262 VIYLKYAKAADLVEVLTGVGDSIQTDQQNALPALRKDISIKAHEQTNSLIVNAAPDIMRD 321 Query: 167 LEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGS----- 221 LEQ +AQ+D+ QV + A I + + LGV+W +A + + Sbjct: 322 LEQVIAQLDIRRPQVLVEAIIAEVQDADGMNLGVQWANKNAGVTQFTNTGLPITTMMAGA 381 Query: 222 -------DLSVATATTHVGFN--IGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQP 272 L A T GFN + ++AL + DI+A+P ++ Sbjct: 382 DQFRRDGTLGTAATTALGGFNGIAAGFYQGNWGMLMTALSSNSKNDILATPSIVTLDNME 441 Query: 273 ASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG 328 A+ G E+P Q +SG++ +VE K + ++V P + + + L++ + Sbjct: 442 ATFNVGQEVPVLAGSQTTSGDNVFQTVERKTVGIKLKVKPQINEGDSVLLEIEQEVSSVA 501 Query: 329 QVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQL 387 + + + + + V V SG+T+ +GG+ + + VPLLGDIP G L Sbjct: 502 DAASSSSTNLGATFNTRTVNNAVLVSSGDTVVVGGLLDKSTNESANKVPLLGDIPVLGYL 561 Query: 388 FRHDGKEDERRELVVFITPRLVSS 411 FR + E ++R L++FI P ++ Sbjct: 562 FRSNSTETKKRNLMLFIRPSIIRD 585 Score = 87.9 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 20/172 (11%), Positives = 63/172 (36%), Gaps = 6/172 (3%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVP 66 +L+ A + + + + + +++ +++ P VSGT+++ + + Sbjct: 8 VLLMASSLAWSAEFSASFKGTDIQEFINTVSKNLNKTVIIDPSVSGTITVRSYDMMNEEQ 67 Query: 67 WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 + Q +V+ G N + + + + A + + R + + Sbjct: 68 YYQFFLSVLDVYGFTVIPMDNNVLKIIRSKDAKSTSMPLATDRQPGIGDEVVTRVVPVNN 127 Query: 127 ADAGELAKAGEKLLSA--KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 A + ++ +L +G+ + N +++ + A+ V ++D Sbjct: 128 VAARDFGRSSRELNDNAWRGTCGDYEPANVVVMTGRAGVIHAVMTIVERVDQ 179 >UniRef50_D1Y3M3 Putative type IV pilus biogenesis protein PilQ n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3M3_9BACT Length = 566 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 83/417 (19%), Positives = 177/417 (42%), Gaps = 39/417 (9%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDV--SGTVSLHLTDVPWKQALQTVVKS 77 +K+++ + D +A V + L +N+VV V + ++L ++ P+++ Q V++S Sbjct: 155 SSRKISMNLKDCDLADVFRLLGAMADVNIVVDASVPQNARMTLAFSEAPFEEVFQFVLRS 214 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 L G + V + R L +S + YA+A + A + Sbjct: 215 QNLGFSVVGRTVVVGAKNSLGLLTGR-------------LTTKSYHVAYAEAQKTAPLLK 261 Query: 138 KLL---SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 +L S + VD+R N +++ + + + +D P QV L A I+ +N+ + Sbjct: 262 ELAELHSPANRVLVDERQNLIVVTGTAFQQEKVRRTLRLLDAPGRQVMLKARIIEVNDDA 321 Query: 195 LRELGV------KWTLADAQHA--------------GGVGQVTTLGSDLSVATATTHVGF 234 +L W Q+ G + L + ++ Sbjct: 322 SDQLETALNAVYDWWWGSYQNGALSAGFAQSGRKPGTAEGALGNLDTSANLPGEIGSGIV 381 Query: 235 NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS 294 + R+LD L L ++++ ++A P + + A++K ++ Y ++ + Sbjct: 382 QLAGTATRMLDFRLRTLVEQKKARVLADPTVTVLDGEKATVKLVEKLKYVSRRDDAQNPT 441 Query: 295 VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE-VLAIDKQEIETQVEVK 353 + +E +EVTP + + G I + + ++ Q ++ GE + + + +ET++ V+ Sbjct: 442 YDDEEVGPKLEVTPRIGRSGMITVSVSLATGEVIQWIRGGQGEQIPQTNSRTVETKIRVR 501 Query: 354 SGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 GE +GG+F + SVP+L IP G+LF+ + R ++V+ + P ++ Sbjct: 502 DGEPFVIGGLFKESRSRTRASVPILSSIPLIGELFKAKLDKKTRSQVVMILIPYILE 558 >UniRef50_B4SL34 General secretion pathway protein D n=6 Tax=Gammaproteobacteria RepID=B4SL34_STRM5 Length = 793 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 81/379 (21%), Positives = 150/379 (39%), Gaps = 29/379 (7%) Query: 60 LHLTDVPWKQALQTVVK---SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 ++L + Q L V++ + G+ + + N + Q + Sbjct: 270 VYLRNAQANQ-LAGVLRGVVAGQSDAPAMGSNEGITPLPGDANRSTPAQPSQPQQAKTGG 328 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 S L + S+ D TN LL+ + L + + Q+D Sbjct: 329 NALESQRLDPNRRDPIDAGSTGFSQNGISVQADVATNTLLISAPEPVYRNLRRVIDQLDQ 388 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHV---- 232 QV + + IV +N+ ELGV+W L + + GG T G A T + Sbjct: 389 RRAQVLVESLIVEVNQTDAAELGVQWMLGNGRTFGGTHFGGTNGGSGLNTAARTTLDVLP 448 Query: 233 --GFNIGRINGR----------LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSE 280 G IG I+G + +AL+ K +I+++P L+ + ASI G Sbjct: 449 KDGLKIGVIDGTINLPGVGQILNMKALANALQSKGGANILSTPNLMTLDNEAASIMVGQT 508 Query: 281 IPYQVS--------SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQ 332 +P+ + ++ ++ L + V P + + G ++L ++ + Sbjct: 509 VPFVSGRYVTDGGGGSNNPFQTIVREDVGLKLRVRPQISEGGTVKLDIYQEVSSIDAQSA 568 Query: 333 QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 + + +K+ ++T V + G+ + LGG+ G+D+VP LG IP G LFR D Sbjct: 569 NSTVGI-ITNKRALDTSVLLDDGQIMVLGGLLEDSVSHGRDAVPGLGKIPVLGALFRSDT 627 Query: 393 KEDERRELVVFITPRLVSS 411 ++ + L+VF+ P +V Sbjct: 628 RKRAKTNLMVFLRPHVVRD 646 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 70/190 (36%), Gaps = 17/190 (8%) Query: 1 MKQWIAALLLMLIPGVQ---------AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVS 51 M+ + L L+ G+ A+ + V L + + + VL+ A +V Sbjct: 4 MRSLACSTALALVVGMAHVPAPVLAQDARDEPVQLNLVETDIGGVLRMAARFTGRQFLVD 63 Query: 52 PDVSGTVSL----HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAE 107 P V+G +++ ++ Q L ++ G + G + V A Sbjct: 64 PRVTGKMTVVSDGPVSRTQAYQLLLGALRMRGFAVVENGGVSRVVPQADAK----LLGGR 119 Query: 108 QARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSAL 167 A + R+ L+Y +A L ++S +T + N L++ D L + Sbjct: 120 VGAGGAGGEVATRTFALRYENAAALVAVLRPMISPDNPITANPGNNTLVITDYADNLERI 179 Query: 168 EQWVAQMDLP 177 + +A +D P Sbjct: 180 ARVIASVDTP 189 Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 21/174 (12%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGS-------M 146 I +N+ R A ++ + LQ A ++A LL A+G+ + Sbjct: 169 ITDYADNLERIARVIASVDTPAGMDTDVVKLQQGIAVDVAAMVAPLLDAQGAEPNQKVVV 228 Query: 147 TVDKRTNRLLLR-DNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL-----GV 200 D R+N +LLR + Q V ++D + + H+V + +L GV Sbjct: 229 MADPRSNSVLLRSSSPGRTRLARQLVEKLDKAQDE-SGNLHVVYLRNAQANQLAGVLRGV 287 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQK 254 +DA G +T L D + +T + G +ALE + Sbjct: 288 VAGQSDAPAMGSNEGITPLPGDANRSTPAQPSQPQQAKTGG-------NALESQ 334 >UniRef50_D0I542 MSHA biogenesis protein MshL n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I542_VIBHO Length = 533 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 79/451 (17%), Positives = 169/451 (37%), Gaps = 52/451 (11%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 G A +++ + ++V +L + NLV+ PDVSG +++ L DV +AL Sbjct: 63 AGSGAHSEKRLRINANNVDAKVFFGSLVQGSDFNLVMHPDVSGNITVSLKDVTVLEALNV 122 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA---- 129 V G +G ++ + + + R+ +L + A A Sbjct: 123 VSDIYGYNVEIQGRLIQIFPAVLRTETFPVDYLQLQRSGVSLTSISTGAISTDASAGSGE 182 Query: 130 -------------------------GELAKAGEKLLSAKG--SMTVDKRTNRLLLRDNKT 162 +L +A ++ S+ + + + ++ Sbjct: 183 DEKSDRTSVPTGGTVIETLTESQFWAQLERAVSGMIGTGDGRSIVISPQAGLITVKAYPN 242 Query: 163 ALSALEQWVAQMDLP-VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGS 221 L +++++ QV L A ++ + + GV W+ A G ++ + Sbjct: 243 ELREVKRFLDASQKRLKRQVILEAKVLEVTLSDGYQQGVNWSNIGASIGSGGINISRPET 302 Query: 222 DLSVATATTHVGFNIG-RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSE 280 L+ + +G I ++ L+ + +++++SPR+ A++ Q A IK G + Sbjct: 303 KLAGDMISNVIGGQTNITITDGNFSSVMNFLDTQGDVNVLSSPRVTAANNQKAVIKVGGD 362 Query: 281 IPYQV--------SSGESGATSVEFKEA--VLGMEVTPTVLQKGRIRLKLHISQNVPGQ- 329 + ++E + ++VTP + + L +H + Sbjct: 363 EYFVTDISSSDTSGDNSDSGPNIELTPFFSGILLDVTPQIDDDNGVLLHVHPAVVDVVTE 422 Query: 330 --VLQQADGEVL------AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDI 381 +Q +E ++ + +SG+ + +GG+ + VPLLGDI Sbjct: 423 EKTIQLGTSSEPYVLPLAKTAIRESDSVIHARSGDVVVIGGLMKSSYEEVVSKVPLLGDI 482 Query: 382 PWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 P G LFR+ + ++ ELV+ + P +V + Sbjct: 483 PGLGHLFRNVNRMKQKTELVILLQPSVVGEQ 513 >UniRef50_A1WZM1 General secretion pathway protein D n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZM1_HALHL Length = 670 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 79/397 (19%), Positives = 158/397 (39%), Gaps = 39/397 (9%) Query: 50 VSPDVSGTVS--LHLTDVPWKQALQTVVKS--------AGLITRQEGNILSVHSIAWQNN 99 V D +G V+ + L + ++ V L+ + + + Sbjct: 204 VDQDTTG-VTEVVPLEHGSASEIVEMVEAIEPEKRAGRRLLLAADDRSNSVLVGGDPARR 262 Query: 100 NIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS---------AKGSMTVDK 150 + ++ A+ I L+Y+DA + E + S+ + Sbjct: 263 PSVMELIQRLDAELEDEEGAAVIYLRYSDAESIVPILEGMAEGMARGPEGETGVSIHDHE 322 Query: 151 RTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHA 210 TN L++ ++ L V ++D+ QV + A I ++ + +ELG++W Q Sbjct: 323 ATNALIINGPPDLVAKLRGVVNRLDVRRAQVLVEAIIAEVSAERSQELGIQWGALGDQGV 382 Query: 211 G-------GVGQVTTLGSDLSVATA-----TTHVGFNIGRIN-GRLLDLELSALEQKQQL 257 G G G VT +G + T + G G G L + L AL + Sbjct: 383 GLVNFDAAGGGSVTNIGRAAAGGTDALGNLSLGSGLTAGAATRGGELGVLLRALSSESDS 442 Query: 258 DIIASPRLLASHLQPASIKQGSEIPYQVS---SGESGATSVEFKEAVLGMEVTPTVLQKG 314 +I+++P ++ + A I G +P+ S++ ++ + + + P + + Sbjct: 443 NILSTPSVMTMDNEEAEIVVGQNVPFVTGREVGDTRDFQSIQREDVGVQLRIRPQINEGD 502 Query: 315 RIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDS 374 ++L + + + + E + + I T V GE + LGG+ + +S D Sbjct: 503 SLKLDIEKEVSDVQER---GEAEDIVTSMRSITTSAMVDDGEIMVLGGLMDEQAESQTDR 559 Query: 375 VPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VP LG IP G LFR++ +++ L+VF+ PR++ + Sbjct: 560 VPGLGSIPGLGWLFRYESSAAQKQNLMVFLRPRIIEN 596 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 71/178 (39%), Gaps = 5/178 (2%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-- 60 +A +L++ A + +TL +D + V+ ++E+ N VV P V G +++ Sbjct: 30 ALLAPMLVVADDDAWAERGDGITLNFEDADIKSVIALVSERTGRNFVVDPRVRGELTVIS 89 Query: 61 --HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 + D Q + ++ G + + + E A++ Sbjct: 90 SQPVDDDQLYQVFLSALQIHGFAAIPADGAIRIVPKNIAKRDQTP-VPEPGTAESGHNFV 148 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + I +++ +A EL L+S + + TN L++ + + L++ + ++D Sbjct: 149 TQVIPIEHVEASELIPLLRPLISDEAELAAYSETNTLIVSETAGNIGRLKRLIDRVDQ 206 >UniRef50_Q15ZI6 Pilus (MSHA type) biogenesis protein MshL n=2 Tax=Pseudoalteromonas RepID=Q15ZI6_PSEA6 Length = 550 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 79/455 (17%), Positives = 164/455 (36%), Gaps = 65/455 (14%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 K + + + E ++ + P VSG ++L+L V +Q V + G Sbjct: 76 KFDINAQQIDAVSFFAGIVEDTPFSVAIHPSVSGLITLNLKQVTLEQIFDIVTEIYGYDV 135 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE------------------------ 118 ++ NI ++ + A R A Sbjct: 136 QRRQNIYRIYPSGMRTETFAVNYLLMKRDGATQTSITSGGVSQAQNSSSSSSGSSLNSFS 195 Query: 119 -------------------NRSITLQYADA-GELAKAGEKLLS--AKGSMTVDKRTNRLL 156 T D +L + + ++ S+ V + + Sbjct: 196 GNSSSGSSNNLNSGSNGNGTSISTSTETDFWTDLLASLQVMIGAEEGRSVMVMPQAGLVT 255 Query: 157 LRDNKTALSALEQWVA-QMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQ 215 +R + + ++++++A + QV L A I+ ++ + G+ WT A Q Sbjct: 256 VRAMPSEIRSVKEFLAISEEHVQRQVILEARILEVSLSDGYQQGINWTEVLANSGSTDFQ 315 Query: 216 VTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 +T L A + + G + L+ L+ + + +++SPR+ A + Q A I Sbjct: 316 FSTTAGSLGDAISASLGGITSLSFVNKDFSGVLNLLQTQGNVQVLSSPRVTAINNQKAVI 375 Query: 276 KQGSEIPYQVSSGES---------GATSVEFKEA--VLGMEVTPTVLQKGRIRLKLHISQ 324 K G + + ++E + ++VTP + +G + L +H S Sbjct: 376 KVGDDEYFVTDVSSQSTVTAATSSTTPNIELTPFFSGIALDVTPQIDAQGGVLLHVHPSV 435 Query: 325 NVPGQVLQQADGEVLAI-------DKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 + + + +E +T + +SGE + +GG+ + PL Sbjct: 436 IETEEQEKVVTLNEEQFVLPLAASNIRESDTIIHARSGEIVVIGGLMQSIISETESKTPL 495 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 LGDIP G LF++ + + ++ELV+ + P +V ++ Sbjct: 496 LGDIPLLGNLFKNRQETETKKELVILLRPTVVGAD 530 >UniRef50_A6FG34 Putative MSHA biogenesis protein MshL n=1 Tax=Moritella sp. PE36 RepID=A6FG34_9GAMM Length = 532 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 90/435 (20%), Positives = 168/435 (38%), Gaps = 52/435 (11%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 82 ++ + V Q +L + K NL VSPDVSG +++ L DV + + V G Sbjct: 75 RMDISAKSVTARQFFGSLLKGTKYNLTVSPDVSGRITVVLNDVTIAETMDAVADMYGYDI 134 Query: 83 RQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE------------------------ 118 +++GN V+ + I R + Sbjct: 135 KRQGNTYRVNGAGVRTEIIPMNYLLMKRNGLSNSSISSGYLTDNSSSSSSSDNDSSSSSS 194 Query: 119 -----NRSITLQYAD-AGELAKAGEKLL--SAKGSMTVDKRTNRLLLRDNKTALSALEQW 170 T D EL L + + + + + ++ + ++ + Sbjct: 195 SSSTGTEISTQTNTDYWAELEYTLLALTANQEETQVIISPQAGLVTVQGYPKDIRKIKDF 254 Query: 171 VAQMDL-PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATAT 229 +A+ + QV L I+ + + G+ W + ++ A ++ +A+ Sbjct: 255 LAKSEQHLQRQVLLEVKIMEVTLNDGYKQGIDWNVNNSNVAADSSFNFSITDITDLASGA 314 Query: 230 THVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS--- 286 + + G +S L+ + +++++SPR+ A + Q A IK GS+ + Sbjct: 315 G-----VFTLAGNDFSAAISLLKTQGDVNVLSSPRVTALNNQKAVIKVGSDEYFVTGYSS 369 Query: 287 ------SGESGATSVEFKEA--VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV 338 +S VE + ++VTP + G + L +H S + G Sbjct: 370 TKSTSSDDDSIEQDVELTPFFSGIALDVTPQIDSDGGVLLHVHPSIIEVTDSNKIVAGIE 429 Query: 339 LAI---DKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 L + D +E +T V+ KSGE + +GG+ NK VP LGDIPW G+LF + + Sbjct: 430 LPLAKSDVRETDTVVKAKSGEIIVIGGLMKTANKDLVSKVPFLGDIPWLGELFTYRSQSV 489 Query: 396 ERRELVVFITPRLVS 410 ++ EL++ I P +V Sbjct: 490 QKTELIILIKPIVVD 504 >UniRef50_O80300 Virion export protein n=9 Tax=Inovirus RepID=G4P_BPIF1 Length = 429 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 87/442 (19%), Positives = 175/442 (39%), Gaps = 47/442 (10%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 MK+ +A+LL +L + + + + +++ PV + + ++ +++SPDV G +++ Sbjct: 1 MKKLLASLLCVL-----SFQSFAIPVELNNAPVREFVSWYSKTTGKPVIISPDVKGEITV 55 Query: 61 HLTDVP---WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQ--------- 108 + DV Q +V+++ G GN V + +E Sbjct: 56 YSADVTKDELPQFFTSVLRANGFDLSP-GNPAVVQKFNRNTYEYSDSFSEPVPASSYDGD 114 Query: 109 ---------ARAQANLPLENRSITLQYADAGELAKAGEKLLS----AKGSMTVDKRTNRL 155 + + L ++ + A +LA + L A + L Sbjct: 115 VPPPTGDFFTKPEIRANLITQTYPVNNVRAKDLAPVIDIFLKGENIAGTKVYPLMGRIFL 174 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQ 215 L+ + + L + +D+P QV + + I G ++ A +G Sbjct: 175 LVTASASQHKELAAFFPSVDVPRTQVLVESVIFETTASD----GFDFSFAAGDPSGSPVA 230 Query: 216 VTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 L+ ++T G + G NG +L L L ALE + +++ PR+L QP + Sbjct: 231 GGINTDRLTSVLSST--GGSFGIFNGNILGLSLKALETSSKSTLLSMPRILTMSGQPGTF 288 Query: 276 KQGSEIPYQVS-------SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG 328 G +P+ + + ++E + + ++V P V G + + + + + Sbjct: 289 TAGQNVPFVTGRVTGEAANVNNPFQTIERHDVGISLKVVPVVTPGGLLIMDVSTNADSIS 348 Query: 329 QVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLF 388 +D + + + I T V++KSG+T+ LGG+ + SVP + IP G LF Sbjct: 349 DSQTASD---IITNTRSISTTVQLKSGQTVLLGGMVDNRESDSDSSVPWVSKIPLIGALF 405 Query: 389 RHDGKEDERRELVVFITPRLVS 410 +R L + I R+V+ Sbjct: 406 TSKSSNANKRTLYILIRARVVN 427 >UniRef50_C6P591 General secretion pathway protein D n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P591_9PROT Length = 690 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 81/379 (21%), Positives = 152/379 (40%), Gaps = 50/379 (13%) Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 L+ N L + S ++ + + AN P + L+ ADA +LA+ + Sbjct: 229 LLADSRTNGLLLRSGNPGRIARVKELVTKLDSAANTPGNIHVVQLKNADATKLAQTLRSV 288 Query: 140 LSAK---------------------GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 LS + G + D +N L++ ++ + L + ++D+ Sbjct: 289 LSGETAPPAAPSTVPQSAGVATSSTGMIQADPSSNALIVTASEPIYNNLRSVIDKLDVRR 348 Query: 179 GQVELSAHIVTINEKSLRELGVKWTLA----------DAQHAGGVGQVTTLGSDLSVATA 228 Q+ + A IV + E GV+W G D + + Sbjct: 349 PQIFVEALIVEVTADKAAEFGVQWQNLVGASKSGAHIIGGTNFGSVASGNNIIDAANNLS 408 Query: 229 TTHVGFNIGRINGR----------LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQG 278 T + G NIG +NG L + ALE +I++ P L+ + A I G Sbjct: 409 TVNQGLNIGIVNGTTTIPGVGTVLNLGMLARALETDTNANILSEPNLMTLDNEEAKIVVG 468 Query: 279 SEIPYQVS--------SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQV 330 +P+ + + ++E K+ L +++ P ++Q G ++L+++ + Sbjct: 469 QNVPFITGQYAQTGSATTATPFQTIERKDVGLTLKIKPQIMQGGTVKLQIYQEVSSVLPS 528 Query: 331 LQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRH 390 + + +K+ IE+ + V + + LGG+ Q PLLGDIP G LFR+ Sbjct: 529 SSSSTSGL-ITNKRSIESNILVDDNQIVVLGGLIQDSVNDVQSKTPLLGDIPILGSLFRY 587 Query: 391 DGKEDERRELVVFITPRLV 409 D ++ + L+VFI P ++ Sbjct: 588 DTRQHTKTNLMVFIRPYIM 606 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 75/186 (40%), Gaps = 12/186 (6%) Query: 1 MKQWIAALLLMLIPGVQAAK---PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT 57 ++ + L + + A+ + VTL + + +V++A+++ K N +V P V GT Sbjct: 7 LRSLLIFSLAIFVAAPCHAEKKEDELVTLNFVNADIQEVIRAISQISKKNFLVDPRVKGT 66 Query: 58 VSL-HLTDVPW---KQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQA 113 +++ T V L + ++ G + + + A A+Q + Sbjct: 67 INIVSATPVSPALGYDILLSALRLQGYAAVESNGVTQIIPEAE-----AKQHIDSLAQGR 121 Query: 114 NLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQ 173 L L+Y A +L ++S + +N L++ D +++ +++ + Sbjct: 122 GDKLVTHVFVLKYESASQLVNVVRPMISPNSVVVAYPASNALVVTDYASSVRRIDKLIDS 181 Query: 174 MDLPVG 179 +D P Sbjct: 182 IDQPSA 187 >UniRef50_Q2LUV6 General secretion pathway protein D n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUV6_SYNAS Length = 717 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 130/291 (44%), Gaps = 20/291 (6%) Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 + G+ +A M+ D R N +++ L + +D+P QV + A IV + Sbjct: 416 SDRGDAFDAAGLRMSADDRKNMIIILSKPDVYRNLLNLLQALDVPARQVLIEATIVELTL 475 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN-GRLLDLELSAL 251 + GV+W + ++ T L +G ++ + +SAL Sbjct: 476 TDELKYGVEWFIRNSWDGDSYTLGTLGKLGLE------PLGLTYAFLSRTGQFEALISAL 529 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIP-----------YQVSSGESGATSVEFKEA 300 +K + +I+++PRL+ A+I+ G ++P + S + S++++ Sbjct: 530 AEKSKANILSTPRLMVLDNMEATIQVGKDVPTVTGQISTLDSVNTTDSTSVSQSIQYRST 589 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 + ++V PT+ +G + L++ + + G+ I + I T + G+T+ L Sbjct: 590 GVMLKVKPTINTEGLMTLEITQEVSDIAE--TPGVGDSPIILTRRINTSIIAAHGQTIVL 647 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 GG+ G+ VPLLGDIP G LF+ K ++ EL+V +TP +++ Sbjct: 648 GGLMQENQSLGESKVPLLGDIPILGNLFKATSKTKDKTELLVLVTPTILTD 698 Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 66/172 (38%), Gaps = 9/172 (5%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQ-VLQALAEQEKLNLVVSPDV---SGTVSLHLTD-VPWK 68 P Q VTL + VP++ V+ AL E K+ V+ + +++ + +P Sbjct: 110 PRRLTMANQPVTLNAERVPLSDFVIYALGETLKVAFVMDEKMMNNKKPITIRMPQAMPPD 169 Query: 69 QALQTVVKSA---GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQ 125 +AL ++ + + L V + + + + + + + + L Sbjct: 170 RALNVILGLLEKERIYLEERAGALYVLEVPPEPRSPVDVRIGVSSVDSPADIL-QIVPLL 228 Query: 126 YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 + ++ + L + + R N ++L + + + +++A D+P Sbjct: 229 HIRPQDVEPLIKDLFRSDVEIKPYTRENVMILHGRASRMRPVLEFIATFDVP 280 >UniRef50_A8GJQ5 General secretion pathway protein D n=6 Tax=Enterobacteriaceae RepID=A8GJQ5_SERP5 Length = 660 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 70/393 (17%), Positives = 143/393 (36%), Gaps = 36/393 (9%) Query: 55 SGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNIL-------------SVHSIAWQNNNI 101 +G VS+ L + V R + L + + Sbjct: 208 AGVVSVALQHASATDVVSIVTTLFRDENRTKKGALPGMKVVADERTNTVLIAGEPSLQAR 267 Query: 102 ARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS----------------AKGS 145 +Q + + I L+YA A L + + + Sbjct: 268 IEGIIQQLDQEKASQGNTKVIRLKYAKAQGLLEVLSGVSANLQDEKKTVGNNVSVMKNMV 327 Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 + D++TN L++ +S LE+ + Q+D+ QV + A IV + LG++W Sbjct: 328 IKADEQTNALIINATPDVMSNLEKVIEQLDIRRAQVLVEAVIVEMQNADGLNLGIQWANR 387 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHVGFN--IGRINGRLLDLELSALEQKQQLDIIASP 263 + N + L+A+ + Q +I+A+P Sbjct: 388 YGGGTQFGNAQAQIAPGFKGGMTEVFKNANGLVTGFYSGNWAGLLTAISNQSQNNILATP 447 Query: 264 RLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLK 319 ++ + A G ++P Q ++ ++ +V K + ++V P + + + L+ Sbjct: 448 SIMTLDNEDAEFSVGQDVPILTGSQTTNSDNVFNTVARKTVGIKLKVKPQINKGQSVLLQ 507 Query: 320 LHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLL 378 + + + + + + + V V+SGET+ +GG+ + + +VP L Sbjct: 508 IEQEVSSVAENSSVDKDNLGATFNIRTVNNTVLVESGETVVVGGLLDKSQSDSKSAVPFL 567 Query: 379 GDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 IP G LFR ++ +R L++FI P ++ S Sbjct: 568 ERIPLLGALFRSTSHKESKRNLILFIRPTVIRS 600 Score = 98.3 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 8/181 (4%) Query: 5 IAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH--- 61 + A+L+ML+ + + + + + + ++ +++ V G V++ Sbjct: 29 LMAVLVMLLWVSAPVQAEAFSANFKGTDIHEFISTASKALGKTIIIDDAVKGKVTVRSYE 88 Query: 62 -LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 L + Q V+ G N +V + + L R Sbjct: 89 PLDAGQYYQFFLNVLDVYGYAVISMPN--NVLKVIPAKDGKRAALNALNTPAEGDELIMR 146 Query: 121 SITLQYADAGELAKAGEKLLSA--KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 + L A E+A + + G++ + N LL+ +++L + +MD Sbjct: 147 IVPLNNIAAKEVAPLMRQFNDSIGIGNVVFLESGNALLITGRADVVNSLVELAHEMDRTE 206 Query: 179 G 179 Sbjct: 207 Q 207 >UniRef50_Q5P6R4 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P6R4_AZOSE Length = 769 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 11/297 (3%) Query: 124 LQYA---DAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 L A D + + L + D+ N LL+ + +E + ++DL Q Sbjct: 426 LNNAGRNDGSQTQATTQFSLGPLVRVVADEFNNALLIYAPGSEYRKIEAALRRLDLSPTQ 485 Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 V + A I+ + G++W G S T GF+ N Sbjct: 486 VLIEASILEVTLSDETRFGLQWFFEGKLGGDYRGS-GLFTDRASETLGRTVPGFSYSITN 544 Query: 241 -GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ----VSSGESGATSV 295 + L+A+ QK +++I+SP ++ A I G + P + V+ G + +TS+ Sbjct: 545 AAGQVRAVLNAMAQKSLVNVISSPSVMVLDNHTAVIHVGDQQPIRSTQTVTDGGTTSTSI 604 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 ++K+ + ++VTP+ G + + + S G V + +++E+ ++V V++G Sbjct: 605 QYKDTGVMLQVTPSANAGGMVAMDIKQSVTDVGAVDDATGQR--SFNQREVASKVAVRTG 662 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 ET+ LGG+ + +G+ VP L DIP G LF R EL+V ITPR+V S+ Sbjct: 663 ETVILGGLIRDSDTNGKTGVPWLHDIPVLGPLFGTTSDVTRRTELLVMITPRVVQSD 719 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 7/172 (4%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQA-LAEQEKLNLVVSPDVSGTVSLHLTDVPWK 68 L V +K V+L + PV A L + KL+ + + G V++H Sbjct: 91 LPASKAVNISKGGAVSLKFEQAPVTDFAHAILGDLLKLDYTLHQPLGGEVTIHTQGAVPP 150 Query: 69 Q----ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITL 124 L++V+ + GL ++ L + + + L Sbjct: 151 DKVLSILESVLAANGLTLARDAQGLYHVGRPELLRGLGASAVNVKAIPTGQGMV--VVPL 208 Query: 125 QYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 Q+ A E+A + A+ + VD N L+L + L +V D+ Sbjct: 209 QFVGAAEMADILRPVAPAEAFVRVDTLRNLLILSGSGNQLEGWLDFVNIFDV 260 Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 73/261 (27%), Gaps = 48/261 (18%) Query: 35 QVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT---VVKSAGLITRQEGNILSV 91 ++L+ L +N+ P G V + L V + V + + L + Sbjct: 182 ELLRGLGASA-VNVKAIPTGQGMVVVPLQFVGAAEMADILRPVAPAEAFVRVDTLRNLLI 240 Query: 92 HSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL------------ 139 S + + L+YA E+ A + Sbjct: 241 LSGSGNQLEGWLDFVNIFDVDMLKGMSVGLFPLEYASVKEVDAALRAVTGAPAAAASAAR 300 Query: 140 -------------------LSAKGSMTVDKRTNRLLLRDNKTAL-SALEQWVAQMDLP-- 177 L + +R N LL+ + ++W+ ++D P Sbjct: 301 GEGQQQAPAEIKQLPTFGPLGGVVRILPIERLNALLVVTPRAHYLQQAKEWIEKLDRPSD 360 Query: 178 ---VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGF 234 Q+ + + S + LG +L A GG +D VA + +G Sbjct: 361 GGTEPQLY----VYPVQNGSAQHLG---SLLSAVFGGGQAGAARTPTDSGVAPGLSSIGR 413 Query: 235 NIGRINGRLLDLELSALEQKQ 255 +G + +A Sbjct: 414 TGLGGSGMMSQALNNAGRNDG 434 >UniRef50_Q3SJB4 Type II secretion system protein D n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJB4_THIDA Length = 667 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 78/408 (19%), Positives = 173/408 (42%), Gaps = 28/408 (6%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV--SLHLTDVPWKQA 70 +PG+++ + +TL + + + + ++ +N + DV + S+ + + + A Sbjct: 172 LPGLRSLFEKPITLEFRNADLKAIFEVISRSAGINFIFDKDVRQDLVASIFVRNTRIESA 231 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 + ++ S L +L+ +++ N A+ Q L ++ L DA Sbjct: 232 IDFLLMSNQLAK----KVLNENTVLVYPNIPAKTRDYQ-------DLRAKTFYLASMDAK 280 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 + + ++ + + +D++ N L++RD A+ E+ + DL +V L ++ + Sbjct: 281 QALNIVKTIVKTR-DVVIDEKLNTLVMRDTPDAIRLAEKLLGSQDLAESEVLLEVEVLEV 339 Query: 191 NEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSA 250 + L ++G+ T S T G N G I L + A Sbjct: 340 SRSRLSDIGI-------TPPTEATFRTLGPSGAPSTTLADLKGLNSGLIGVSSLSASVRA 392 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT------SVEFKEAVLGM 304 +++A+PR+ + + A + G +P ++ S T +V + + + Sbjct: 393 RMDNGDTNLLANPRIRVKNREKAKVHIGERVPIITTTVTSAGTTSFLPETVNYLDVGIKF 452 Query: 305 EVTPTVLQKGRIRLKLHISQNVPGQ-VLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 EV P + + +K+ + + GQ + ++ EV + + T + ++ GET AL G+ Sbjct: 453 EVEPLISLNDEVTIKVALEVSSLGQKSVTKSGSEVYRVGTRNASTTLALRDGETQALAGL 512 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + + + +P G IP G+LF ++ E+V+ ITP +V + Sbjct: 513 ISDEERETVNGIPGFGRIPAIGRLFASKSNSTDKTEIVLLITPHIVRN 560 >UniRef50_A0YBE1 Type II and III secretion system protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBE1_9GAMM Length = 630 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 81/341 (23%), Positives = 144/341 (42%), Gaps = 25/341 (7%) Query: 95 AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA----------KG 144 R ++ + + L Y DA E+ E L + Sbjct: 241 DPAKRKQFRNLIKKLDKPLDGQGNTDVVYLHYVDASEIVPILENLAKSIQSNQKDTDSNI 300 Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW-- 202 S+ K N L++ + L+ ++ ++Q+D+ QV + A +V + + ++GV W Sbjct: 301 SIEASKSANALVINAPPSILTTMKSIISQLDIRRAQVMVEAILVEVRGELASDVGVTWIT 360 Query: 203 ----TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 ++ A + G + SD S + GF G NG L L AL Q + Sbjct: 361 DPDNSIVGAVNTLGNLPLANAPSDGSALPFSAGRGFTFGYFNGGDLQAALRALSATQNAN 420 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKEAVLGMEVTPTVL 311 I+++P ++A + AS+ G +P+ S A T++E ++ + VTP + Sbjct: 421 ILSTPTIVAIDNEEASLLVGQNVPFITGQATSSASSTNDPFTTIERQDIGTSLVVTPRIN 480 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 Q I L++H + A V +K+EI T+ ++ + L +GG+ + Sbjct: 481 QGDSITLEIHQKTETIAPSIDIASDIV--TNKREIITKALIRDDQVLVIGGLINDEETEI 538 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + VPLLGDIP+ G LF G + L+VFI P ++ + Sbjct: 539 IEKVPLLGDIPYLGSLFSSKGTSHTKTNLMVFIHPTILKDD 579 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 73/176 (41%), Gaps = 8/176 (4%) Query: 5 IAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL---- 60 + +L A +K+T+ + D + ++Q +A+ N+VV DV G V++ Sbjct: 15 LLIAATLLSLSQLAYSAEKLTMNMRDADIRALIQWVADNTGKNIVVHRDVKGKVTVLSPE 74 Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 LT Q +V++ + L + + + A + + Sbjct: 75 PLTVDEAYQVFLSVLQVHEYAVIETPEALKIVPRSIAAS----GALPYAASSTTADMVVS 130 Query: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 I ++ A ++A+A L+S + TN L+L D+ + +S+ ++ + Q+D Sbjct: 131 IIKIENTSALQMAEALRPLMSKDAVIKPYLATNALVLADHASNISSAQELIQQLDK 186 >UniRef50_Q1Q6E1 Similar to general secretion pathway protein D n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6E1_9BACT Length = 668 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 84/419 (20%), Positives = 174/419 (41%), Gaps = 24/419 (5%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 M++ + + + +P + A K + V + + L K + V G Sbjct: 242 MEKLLTIIKIFDVPFL-AGKAMRF-YEFKYVDARNMSKDLGSLAKS---LGAKVGGD--G 294 Query: 61 HLTDVPWKQA--LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 VP+ L + K L+ + + I ++ Q + R + + Q + Sbjct: 295 EFDFVPFSDTNKLIVITKLPELLPKIDMWIKNIDVPPTQLDEEMRVYIYKVQHQKAETIV 354 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 + K + + + D TN ++++ + +++ + +D Sbjct: 355 PIITQMYSEKMAAQPKKLGRDIVESMKVLADTETNSVIMKTFPSDYKSIKAIIEAIDATP 414 Query: 179 GQVELSAHIVTINEKSLRELGVKWTLADAQ-HAGGVGQVTTLGSDLSVATATTHVGFNIG 237 QV + IV + + G +W + + GVG + + +V T Sbjct: 415 QQVFIEVLIVEVTRNDTLDYGTEWLWSGSNLQVYGVGDIARAAGNAAVQFTNT------- 467 Query: 238 RINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSV-- 295 ++ + L I+++P +L QPASI+ G E+P SSG+ T++ Sbjct: 468 -FAKGSFEILIDILATSSNAKILSAPHILVRDEQPASIQVGEEVPILTSSGQQTGTTITF 526 Query: 296 ---EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEV 352 ++++ + + VTP + + G I L+++ + ++ + ++++T + + Sbjct: 527 EQVQYRDTGIILTVTPHIAENGLITLEVNQEVSN-AKLTDTGVEKSPTFSTRQVQTSLVI 585 Query: 353 KSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 KSG T+ LGGI +KN+ +PLLGDIP+ G LF+ D+R EL++ ITP + ++ Sbjct: 586 KSGHTIGLGGIIEQKNEKEVKKIPLLGDIPYLGNLFKATSLIDKRTELIMLITPYIANN 644 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 7/168 (4%) Query: 17 QAAKPQKVT--LMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ---- 69 A +K+ L DD + V+Q L E +N V+ V G V+LH + +K+ Sbjct: 88 PAYTGEKIDIALNFDDAEIKDVVQVILGEILNVNYVLDKRVGGKVNLHASGEVYKEELIS 147 Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 L +++ ++GN+ +V A + + + + + + L+YAD Sbjct: 148 MLNSLLYVYNFTILKDGNLYNVLPQAEARRETSIIIHGDKIPEWSKDIIIQIVPLKYADP 207 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 +L+ ++ +S+ G++ + L++ DN + + L + D+P Sbjct: 208 KKLSSTVKQFMSSIGNIVTHEDFPYLMIIDNASVMEKLLTIIKIFDVP 255 >UniRef50_Q48JN3 General secretion pathway protein GspD n=2 Tax=Pseudomonas syringae group genomosp. 2 RepID=Q48JN3_PSE14 Length = 778 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 84/385 (21%), Positives = 162/385 (42%), Gaps = 38/385 (9%) Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN 119 ++L + QA + GL+T + + S + A + + + ++ + Sbjct: 333 VYLRNA---QAGKLAQALRGLLTGESDSGASDTTRAMLSGMGSTGNKNDVQGNSSAGPVS 389 Query: 120 RSI-----------TLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALE 168 R++ + A+ +A ++ D TN LL+ + L Sbjct: 390 RTVAGSGYGQSSASPSVATAGSQQAEQNTAFSAAGVTIQADATTNTLLISAPEPLYRNLR 449 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATA 228 + + Q+D QV + + IV ++E + GV+W + +GG G V GS L+ + Sbjct: 450 EVIDQLDQRRAQVVIESLIVEVSEDDANQFGVQWQTGNLNGSGGFGGVNLGGSGLNTGGS 509 Query: 229 TT----HVGFNIGRINGR----------LLDLELSALEQKQQLDIIASPRLLASHLQPAS 274 T+ G N+G + G L + AL+ K +++++P LL + AS Sbjct: 510 TSIDVLPTGLNVGVVRGAVTIPGIGEVLDLKVLARALKSKGGSNVLSTPNLLTLDNEAAS 569 Query: 275 IKQGSEIPYQVSS--------GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNV 326 I G IP+ S + +V+ +E L + V P + + G ++L ++ + Sbjct: 570 IFVGQTIPFVTGSYVTGGGGTSNNPFQTVQREEVGLKLNVRPQISEGGTVKLDIYQEVSN 629 Query: 327 PGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQ 386 Q A G V +K+ I+T + + G+ + LGG+ ++VP L IP G Sbjct: 630 VDQRASLASGTV--TNKRAIDTSILLDDGQIMVLGGLLQDGYNQSDEAVPWLSRIPLLGV 687 Query: 387 LFRHDGKEDERRELVVFITPRLVSS 411 LFR++ + + L+VF+ P ++ Sbjct: 688 LFRNEARSTSKTNLMVFLRPYIIRD 712 Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 65/174 (37%), Gaps = 9/174 (5%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQTV---VK 76 Q + L + + V++AL+ ++ P V+GT++L VP QA + + ++ Sbjct: 94 DQLIQLNFVEADIQSVVRALSRSTGQQFLLDPKVTGTLTLVSEGSVPASQAYEMLMAALR 153 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 G G + V A + + R+ LQY +A L Sbjct: 154 MQGFSVVDVGGVAHVVPEDDARLLGGP--VYSADKPSGNGMLTRTFRLQYENAVNLIPVL 211 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 ++S + N +++ D L + Q + +D P + +VT+ Sbjct: 212 RPIVSPNNPINAYPGNNTIVVTDYADNLVRVAQIIDGIDTPSA---IDTDVVTV 262 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 10/122 (8%) Query: 65 VPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITL 124 V L+ +V I GN V + +N+ R ++ +T+ Sbjct: 205 VNLIPVLRPIVSPNNPINAYPGNNTIVVT--DYADNLVRVAQIIDGIDTPSAIDTDVVTV 262 Query: 125 QYADAGELAKAGEKLLSAKG-------SMTVDKRTNRLLLR-DNKTALSALEQWVAQMDL 176 A ++A +LL +G S+ D R+N +++R + + ++D Sbjct: 263 HNGIAVDIASMVSELLDTQGGDATQKISVIGDPRSNAIIIRAGSPERTELARNLIYKLDN 322 Query: 177 PV 178 Sbjct: 323 AQ 324 >UniRef50_C7HZF2 General secretion pathway protein D n=1 Tax=Thiomonas intermedia K12 RepID=C7HZF2_THIIN Length = 884 Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 126/308 (40%), Gaps = 38/308 (12%) Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 L G++ D N L++ + L + + ++D+ QV + A I ++ +LG Sbjct: 397 LPQGGTVYADNSLNALIINAPQPVYMQLRRVIERLDVRRAQVYVEALIAEVDANKAAQLG 456 Query: 200 VKWTLADAQHAGGV-----------------------GQVTTLGSDLSVATATTHVGFNI 236 ++W G ++ + L+ + G NI Sbjct: 457 IQWQAIAGSAGNQNAIIGGSNYGTGGSNIINLQAAISGGGSSAATALASGSLAIPNGLNI 516 Query: 237 GRING----RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA 292 G ++ L L + L+ + +I+++P L+ + A I G +P+ Sbjct: 517 GILHNVAGMATLGLLANFLQTQDGANILSAPNLMTLDNEEAKIVVGQNVPFVTGQYAQTG 576 Query: 293 --------TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQ 344 ++E K+ L ++V P + G I++ ++ + A + +K+ Sbjct: 577 SSATVTPFQTIERKDVGLTLKVRPQITAGGAIKMDVYQEVSSISSTTNAAG---IITNKR 633 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 I+T V V G+T+ LGG+ +P LGDIP G LFR + + ++ +L+VF+ Sbjct: 634 SIQTAVLVNDGQTIVLGGLMQDNVSQNNSKIPGLGDIPGLGALFRSNSRTAQKTDLMVFL 693 Query: 405 TPRLVSSE 412 P +V +E Sbjct: 694 RPIVVRTE 701 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 10/240 (4%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQT 73 + + +T+ + + +A +QA+A N +V P V G V++ VP ++ Q Sbjct: 50 QAKRSANGDLTINLVNADIASAVQAVAAATGRNFIVDPRVKGQVTIQFEKPVPPQKVFQA 109 Query: 74 VV---KSAGLITRQEGNILSVHSIAWQNNNIAR---QEAEQARAQANLPLENRSITLQYA 127 ++ + AG + + V A A + + L+ A Sbjct: 110 LLTQLRLAGFAVVEHDGVFQVVPEADAKLQSGPVGVGLAPSRIPGRGDQVVTQIFQLRNA 169 Query: 128 DAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 A L L+S ++ V N L++ D L + + +A +D+P G + Sbjct: 170 SASSLLPVLRPLISPNNTINVSPSGNALVVTDYADNLKRIARIIAALDVPTG---TEVTV 226 Query: 188 VTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLE 247 V + +L T G +VA + + L + Sbjct: 227 VPLTYAVASDLAPTLQKLIDMQTVTSSGPGTPGVQAAVAGSGAMRAVILPETASNSLIVR 286 >UniRef50_C4L998 General secretion pathway protein D n=2 Tax=Bacteria RepID=C4L998_TOLAT Length = 685 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 80/404 (19%), Positives = 142/404 (35%), Gaps = 64/404 (15%) Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 AL V+ + + + V S Q Q + R L+YA+A Sbjct: 219 ALTNVLTPKVVADERTNAV--VISGENQGRQRIVTMIRQLDREQQTQGNTRVFYLKYANA 276 Query: 130 GELAKAGEKLLSA-------------------------------------KGSMTVDKRT 152 L + S+ D++T Sbjct: 277 KNLVEVLSGTSKTIQNEKNSASGSMTATGNTADSASSSGSGSSSSGYNGKDLSIVADEQT 336 Query: 153 NRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGG 212 N L++ + LE+ +A++D+ QV + A IV I + GV+W + Sbjct: 337 NALVITAQPDVMQELERIIAKLDIRRAQVLVEAIIVEIQDGDTLNFGVQWANTNGGGTQF 396 Query: 213 VGQVTTLGSDLSVAT--------------ATTHVGFNIGRINGRLLDLELSALEQKQQLD 258 + + A A + + ++AL + + Sbjct: 397 TATGLPTTTVANAANEWRNDGELSSTSTAALSSFNGLVAGFYEGNWAGLVTALSSNTKSN 456 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGA----TSVEFKEAVLGMEVTPTVLQKG 314 I+A+P ++ + A+ G E+P S S A ++VE K ++VTP + + Sbjct: 457 ILATPSIVTLDNKEAAFNVGQEVPVVTGSQSSTAGSVYSTVERKTVGTKLKVTPQINEGD 516 Query: 315 RIRLKLHISQNVPGQVLQQADGEVL-------AIDKQEIETQVEVKSGETLALGGIFTRK 367 + L++ + + + ++ V VKSGET+ LGG+ + Sbjct: 517 SVLLEVEQEVSSVASSSSTDSSSSSSNSSLGSTFNTRTVKNSVLVKSGETVVLGGLLSNN 576 Query: 368 NKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VPLLGDIP G LFR++G ++ L+VFI P ++ Sbjct: 577 TSESVYKVPLLGDIPILGYLFRYNGTSTTKQNLMVFIHPTILRD 620 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 70/182 (38%), Gaps = 6/182 (3%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 +K+ + L G+ A + + + + + + + ++V P V GT+++ Sbjct: 5 LKRSLVIGCLCTQLGISPALAAEYSASFKGTDIQEFINTVGKNLGKTIIVDPSVRGTINV 64 Query: 61 H----LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 L + + Q +V+ G N + A + A++ R + Sbjct: 65 RSYDLLNEEQYYQFFLSVLDVYGFAVVPMPNGILKVVKAQNAKTSSIPVADETRTGSGDE 124 Query: 117 LENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 + R + ++ ELA +L + G++ + +N LLL ++ L + V ++ Sbjct: 125 MVTRVVPVRNVSVRELAPLLRQLNDNAGGGNVVHYEPSNVLLLTGRAAVVNRLVEIVRRV 184 Query: 175 DL 176 D Sbjct: 185 DK 186 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 70/220 (31%), Gaps = 14/220 (6%) Query: 60 LHLTDVPWKQALQTVVKSAGLI---TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + + +V ++ + + +V + + + R R Sbjct: 130 VPVRNVSVRELAPLLRQLNDNAGGGNVVHYEPSNVLLLTGRAAVVNRLVEIVRRVDKVGD 189 Query: 117 LENRSITLQYADAGELAKAGEKLLSAK---------GSMTVDKRTNRLLLRDNKTALSAL 167 I L+YA AGE+ + L + D+RTN +++ + Sbjct: 190 ENVDVIKLKYASAGEMVRLITALTKNDKNALTNVLTPKVVADERTNAVVISGENQGRQRI 249 Query: 168 EQWVAQMDLPVGQVELSAHIVTINEKSLREL-GVKWTLADAQHAGGVGQVTTLGSDLSVA 226 + Q+D Q + + + + + + L V + ++ + + A Sbjct: 250 VTMIRQLD-REQQTQGNTRVFYLKYANAKNLVEVLSGTSKTIQNEKNSASGSMTATGNTA 308 Query: 227 TATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLL 266 + + G DL + A EQ L I A P ++ Sbjct: 309 DSASSSGSGSSSSGYNGKDLSIVADEQTNALVITAQPDVM 348 >UniRef50_A1TYN1 Pilus (MSHA type) biogenesis protein MshL n=2 Tax=Marinobacter RepID=A1TYN1_MARAV Length = 572 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 83/453 (18%), Positives = 170/453 (37%), Gaps = 55/453 (12%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ 69 L+ + ++ + +VP + +AL + N+VV PDV+ TVSL L+DV + Sbjct: 82 LLPPLSSSPQQDERFDVNASEVPASSFFEALVAGTRYNVVVRPDVATTVSLRLSDVTVPE 141 Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNN-------------------------NIARQ 104 + GL + G + V + Q + Sbjct: 142 VMDIAADLYGLDITRSGRLYRVAADQVQTRLFPIDYLHFKRRGGSETRVSSGQVSSSRSN 201 Query: 105 EAEQARAQANLPLENRSITLQYADAG-------ELAKAGEKLLS-AKGSMTVDKRTNRLL 156 N E R++ ++ A ++ G + V+ ++ Sbjct: 202 REGAGSNDNNEDNETRNLVGTTISTQTESDFWRDIRDALNMIVGGDNGQVVVNPGAGLVM 261 Query: 157 LRDNKTALSALEQWVAQMD-LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQ 215 +R L +E ++ + + + QV L A I+ + + G+ W + Sbjct: 262 VRAGADDLRLVENYLRKTELIMQRQVVLEAKILEVGLNEGYQQGIDWNDVQSSAGRADYF 321 Query: 216 VTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASI 275 + + T G ++ + L Q+ + I++SPR+ + Q A I Sbjct: 322 TSQSLGGQQIRTPDIG-GLFSATVSAGDFTGLIELLGQQGNVQILSSPRISTVNNQKAVI 380 Query: 276 KQGSEIPYQV-----------SSGESGATSVEFKEA--VLGMEVTPTVLQKGRIRLKLHI 322 K G++ + ++ +S +TSVE + ++VTP + + G I L +H Sbjct: 381 KVGTDEFFVTDIDFDDNNSAVTATDSTSTSVELTPFFSGISLDVTPQIAEDGAITLHVHP 440 Query: 323 SQNVPGQ-----VLQQADGEVL--AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSV 375 S + + + D + +E ++ + +SG+ + +GG+ ++ +V Sbjct: 441 SVSEVADQEKVITIGERDVTLPLARSTVRETDSVIRAESGQIVVIGGLIQNSSEDNNSAV 500 Query: 376 PLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 P +IP G+LF+ E + ELV+ + P + Sbjct: 501 PFFSEIPLLGELFKQRNFESRKSELVILLRPVV 533 >UniRef50_C6HW33 Putative general secretion pathway protein D n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW33_9BACT Length = 565 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 83/459 (18%), Positives = 173/459 (37%), Gaps = 85/459 (18%) Query: 22 QKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS-LHLTDVPWKQALQT---VVKS 77 QKV++ +V V+ +++ ++E + N+V+ V G ++ L +V +A + ++ Sbjct: 67 QKVSMNFRNVDVSVLVRFMSELLQQNIVMDERVKGKLTILSPAEVTVPEAFRIFSDALRM 126 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 G + ++ + TL+ A +AK Sbjct: 127 KGFEAVSKKGMIYIVPETQAPPTREMFL----------------YTLENTSAKSIAKTVN 170 Query: 138 KLLSAK-----------------GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 +LS + DK +N L++ L+ + +D G+ Sbjct: 171 AILSKGFAPRPVGGVREGGFDGPIQIVPDKSSNSLIVSATAHDYERLKPILHSLDAQPGE 230 Query: 181 VELSAHIVTINEKSLREL--------------GV----KWTLADAQHAGGVGQVTTLGSD 222 V + A ++ I+ L + GV + + + G G + GS Sbjct: 231 VYVKASLIEISTDKLNNIQVNLLGGVLGSNNSGVVGLTNYGMLGSIVNGATGASSLSGST 290 Query: 223 LSVATAT------------------------THVGFNIGRINGRLLDLELSALEQKQQLD 258 A + T F +N + L+ALE + Sbjct: 291 TGAAGSLGVVSGAAGAASALSGLNGLVAGVLTGGTFKYNGVNYPNIGELLNALETYSDVR 350 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGA----TSVEFKEAVLGMEVTPTVLQKG 314 +++P +LA+ A I G ++P+ ++ T ++ + + +E+TP +L Sbjct: 351 TLSTPEILATDGVKAKITIGEDVPFITGQSQTVGGNVMTMIQRQNVGITLELTPHILSHN 410 Query: 315 RIRLKLHISQNVPGQVLQQADGEV--LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQ 372 R+RL + + + Q K+ +T + + SG+T+ +GG+ +++ Sbjct: 411 RVRLDVKQTISALTNASQVIGTIAVGPTTTKRSAKTNLTISSGQTVVIGGLISKETSIND 470 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +P L DIP G LF + E +R +L++F+TP ++ + Sbjct: 471 QGIPFLSDIPILGYLFSNTNNEKKRDDLLIFLTPYVIRN 509 >UniRef50_D1B5I4 Type II and III secretion system protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5I4_THEAS Length = 589 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 87/404 (21%), Positives = 171/404 (42%), Gaps = 29/404 (7%) Query: 23 KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT-VSLHLTDVPWKQALQTVVKSAGLI 81 V L + +V + V + L + N++ P V + V+L + VP K+ ++++ + Sbjct: 184 PVDLALREVELKDVFRMLGDFSGYNIICDPTVPTSPVTLTVRKVPMKEVFSYLMRTYDIT 243 Query: 82 TRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 G + V ++ ++ + ++ + Y D +++ + L Sbjct: 244 YAVMGRTILVGKADSLAKSLGQE-------------KTKAFEISYGDVKQISAQVQTLFE 290 Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG-- 199 + VD+R + + L+A+E+++ D P QV L A IV + + +REL Sbjct: 291 ITRPIAVDERLRVMYVTGRPEQLAAVERFLNAADHPGKQVMLQARIVEVKDDGVRELESV 350 Query: 200 VK-----WTLADAQHAGGVG-------QVTTLGSDLSVATATTHVGFNIGRINGRLLDLE 247 V W L+ + G +G V ++ T + LLD Sbjct: 351 VNTVYRYWWLSFSSKGGVLGYSRINQESVYKNDTNRVTKPGATDISAIAESGGLSLLDAG 410 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVT 307 + ALE + +ASP ++ + A I I Y + ++G + ++ ME Sbjct: 411 IKALENADKGKTLASPSVVVVDGKEAKISLTENIKYISARDQAGNPTYSEEKVGPTMEFL 470 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQA-DGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 PTV + G + +K+ + + ++ EV +E+ + V V+ GE +GG+F Sbjct: 471 PTVGRDGFVTIKMTLKTGEVTKYIKGGLGEEVPQTSTREVTSYVRVRDGEPFVVGGLFRD 530 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 N + +P+L DIP G+LF+ K+ ER E+ + + P ++ Sbjct: 531 SNTFSEYRIPVLSDIPLIGELFKSRTKKKERGEVAMIVIPHILD 574 >UniRef50_B1Y075 Pilus (MSHA type) biogenesis protein MshL n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y075_LEPCP Length = 577 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 89/497 (17%), Positives = 182/497 (36%), Gaps = 103/497 (20%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 + + L +++ P AQV L+ ++V P+V+G ++LHL D +AL+ + + Sbjct: 25 SAEPRFDLALNNAPAAQVFMQLSMGSNWQVLVGPEVAGHITLHLRDTSVPEALEALRELY 84 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQAR---------------------------- 110 G R G + V Q R Sbjct: 85 GYDYRISGRRIYVQPNTVQTRLFHVNYLPGRRQGTSDLHVSSASMTHGGGGSGSNAGQGG 144 Query: 111 -------------AQANLPLENRSITLQYADAG-------ELAKAGEKLL---------- 140 A L NRS Y ++ + + +L Sbjct: 145 NTPASYGSSSNNTAGNGSGLNNRSDDSAYVRTSSDADFWRDVQASLQSMLAIGESGGEAP 204 Query: 141 -------SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP-VGQVELSAHIVTINE 192 + S+ ++ +++R L + ++ + + QV L A I+ + Sbjct: 205 AAAAANPQQRRSLVLNPAAGVIVVRATPAELRQVADYLKAVQVSIERQVMLEAKILEVEL 264 Query: 193 KSLRELGVKWTLADAQHAGGVG------------------QVTTLGSDLSVATATTHVGF 234 S + G+ W+ G + T++ ++A +++ F Sbjct: 265 GSEAQSGINWSAFGRALGGALSIGLVQPGVTLAGSGALTLGGTSITPGGNLAASSSGAPF 324 Query: 235 NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS-------- 286 LS LE + ++ +++SPR+ + Q A +K GS+ Y Sbjct: 325 YGLAFQSANFAALLSFLESQGKVQVLSSPRIATLNNQKAVLKVGSDELYVTGVSSTTTAT 384 Query: 287 -SGESGATSVEFKEA--VLGMEVTPTVLQKGRIRLKLHISQNVPGQVL------QQADGE 337 S + SV + + ++VTP + +G++ L +H + + + + Sbjct: 385 GSTSTSTPSVVLQPFFSGIALDVTPQIDDQGQVMLHVHPAISTVSEKQKNINLGSLGSYQ 444 Query: 338 VL--AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 + + E ++ V V+ G+ +A+GG+ +++ + + +VP LGD+P G LFR Sbjct: 445 LPLASSTVNETDSIVRVRDGQIVAIGGLMSQEQREERSAVPGLGDVPLVGGLFRQTSTVM 504 Query: 396 ERRELVVFITPRLVSSE 412 +RELV+ I P ++ ++ Sbjct: 505 RKRELVILIKPTVIRAD 521 >UniRef50_Q4ZRP9 Type II and III secretion system protein:NolW-like n=8 Tax=Pseudomonas syringae group RepID=Q4ZRP9_PSEU2 Length = 776 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 11/283 (3%) Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 L A +T K +N+LL+R +E + ++D P QV++ I+ + ++G Sbjct: 465 LDASTRITAQKSSNQLLVRTRPAQWKEIESAIKRLDNPPLQVQIETRILEVKLTGELDMG 524 Query: 200 VKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFN-----IGRINGRLLDLELSALEQK 254 V+W L G T + A T L + L ALE Sbjct: 525 VQWYLGRLAGNSGTTGNVTNTAGSQGAIGTGGAALASTDAFFYSFVSNNLQVALRALETN 584 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPYQVSS------GESGATSVEFKEAVLGMEVTP 308 + ++++P L+ + Q A I+ G IP +S + +SVE+ + + ++V P Sbjct: 585 GRTQVLSAPSLVVMNNQQAQIQVGDNIPISQTSINTNTNTGTTLSSVEYVQTGVILDVVP 644 Query: 309 TVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 + G + + + + I + + TQV +SG+T+ LGG+ + N Sbjct: 645 RINPGGLVYMDIQQQVSDADSSGTTDANGNPRISTRSVATQVAAQSGQTVLLGGLIKQDN 704 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 ++VP LG IP LF + K +R EL+V ITPR+++S Sbjct: 705 AETVNAVPYLGRIPGLRWLFGNTSKSKDRTELIVLITPRVITS 747 Score = 84.0 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 58/158 (36%), Gaps = 7/158 (4%) Query: 24 VTLMVDDVPVAQVLQAL-AEQEKLNLVVSPDVSGTVSLHLTD-VPWKQAL---QTVVKSA 78 + + P+ V+ ++ + N ++ V G VS + V +QAL +T++ Sbjct: 106 IVFNFTNQPIQAVINSIMGDLLHENYSIAQGVKGDVSFSTSKPVNKQQALSILETLLSWT 165 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 ++GN + + E AQ + + R L+Y A E+ K + Sbjct: 166 DNAMIKQGNRYVILPSNQAVA--GKLVPEMRVAQPSAGMSARLFPLRYISATEMQKLLKP 223 Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + VD N L L L+ + + D+ Sbjct: 224 FARENAFLLVDPARNVLSLAGTPEELANYQDTIDTFDV 261 >UniRef50_Q07WN6 Pilus (MSHA type) biogenesis protein MshL n=2 Tax=Shewanella RepID=Q07WN6_SHEFN Length = 556 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 89/464 (19%), Positives = 166/464 (35%), Gaps = 68/464 (14%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK 76 ++ + ++V +L + L++ V PDV G +SL L V +A+Q V Sbjct: 73 ALPAERRFDVSANEVDARVFFPSLVKDTPLSVAVHPDVQGKISLSLKAVTLSEAIQVVED 132 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE------------------ 118 G +EG IL V + R +L Sbjct: 133 IYGYEVNREGRILRVFPSGMRTETFPLNYIYMQREGLSLTSVSSGRISDQNNNSSNGSNN 192 Query: 119 ---------------------------NRSITLQYADA-GELAKAGEKLLSAKG---SMT 147 + D GEL ++ G + Sbjct: 193 SNSNSSNSSSNSNSSNGNSNSSDNTNGTFIRSTTKTDFWGELQATLMSIMGETGGGRQVV 252 Query: 148 VDKRTNRLLLRDNKTALSALEQWVAQMDL-PVGQVELSAHIVTINEKSLRELGVKW-TLA 205 V + + +R L + ++ + QV L A I+ + + G++W + Sbjct: 253 VTPQAGLVTVRAFPDELRQIRSFLQIAESHLQRQVILEAKIIEVTLSDGYQQGIQWENVL 312 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRL 265 + + T+ G LS A + G G ++ L+ + +D+++SPR+ Sbjct: 313 GHAGSTNIDFSTSAGQGLSNAITSAIGGVTSINFTGSDFSTIINLLDTQGDVDVLSSPRV 372 Query: 266 LASHLQPASIKQGSEIPYQVSSGESG--------ATSVEFKEA--VLGMEVTPTVLQKGR 315 AS+ Q A IK G++ + + VE + ++VTP + + G Sbjct: 373 TASNNQKAVIKVGNDEYFVTDVSSTTVAGTTPVTTPQVELTPFFSGIALDVTPQIDEYGN 432 Query: 316 IRLKLHISQNVPGQVL-----QQADGEVL--AIDKQEIETQVEVKSGETLALGGIFTRKN 368 + L +H S + E+ + +E +T + SG+ + +GG+ +N Sbjct: 433 VILHVHPSVIDVTSQTKEIKISDSTLELPLAQSEIRESDTVIRAASGDVVVIGGLMKSEN 492 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 VPLLGDIP+ G+ F K ++ EL++ + P +V + Sbjct: 493 IETVSKVPLLGDIPFLGEAFTSRTKSKKKTELIIMLKPTVVGGD 536 >UniRef50_A0Z790 Helix-turn-helix, AraC type n=6 Tax=unclassified Gammaproteobacteria RepID=A0Z790_9GAMM Length = 696 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 87/423 (20%), Positives = 163/423 (38%), Gaps = 66/423 (15%) Query: 54 VSGTVSLHLTDVPWKQALQTVV----KSAGLITRQEGNIL---------SVHSIAWQNNN 100 + GT + L + +Q + +S G + V + N+ Sbjct: 211 IQGTQVIKLRYAVAEDVVQMLQTLEKQSRGDGAESNDEVTLVADKRTNSVVVTADELNSQ 270 Query: 101 IARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS----------------AKG 144 + + L+YADA E+A+ +++ Sbjct: 271 RILDLVTYLDTPLEQSGNVKVVYLEYADAVEVAEVLTRVMQNMSRLDTGGDRKPSTNTNS 330 Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL 204 ++ D+ TN L++ + +++LE +A++D+ QV + A IV + +ELG++W Sbjct: 331 TIEADEGTNALIITADADEMASLEAVIARLDIRRAQVLVEAIIVEMEITEGQELGLQWIF 390 Query: 205 ADAQHAGGVGQVTTLG-------------------------SDLSVATATTHVGFNIGRI 239 AD A G T+ + G + Sbjct: 391 ADDSGAFGSNVSTSSAQQQRNAAIGNALLGDENSNADIGVRDLAGALSQVPGTTLGWGVV 450 Query: 240 NGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA------ 292 + + L+ALE + +I+++P LL Q A I G +P+ S + Sbjct: 451 GDDLSMSVILNALETQGNANILSTPSLLTLDNQEAYITVGQNVPFVTGSYSNTGGASNVQ 510 Query: 293 ---TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 ++E + + ++VTP V + + L + + Q L A + ++++IET+ Sbjct: 511 NPFQTIERENVGITLKVTPQVNEGDSVVLDIVQEVSSISQQLLAAADVI--TNERKIETK 568 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V + G+ + LGG+ + Q VP L DIP G+LFR+D + L+VFI P +V Sbjct: 569 VMAQDGDVVVLGGLVKDDVQDSQQGVPFLQDIPLLGRLFRNDVVSVTKSNLLVFIRPTIV 628 Query: 410 SSE 412 + Sbjct: 629 RDD 631 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 69/182 (37%), Gaps = 5/182 (2%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV---- 58 I L+ + +Q Q+ T+ + D + ++++ +A+ +VV P V G + Sbjct: 32 WLIMLLVATSLSSIQTVSAQEYTVNLQDTDIQELIKFVADVTGATIVVDPSVKGKIKVVS 91 Query: 59 SLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 S + +++ G + GN++ V + + +N Sbjct: 92 SRPVNKSELYDLFLSILDVQGYTAVRTGNVIRVIPNKD-ARSSPVEVPSSGAMSSNDEYV 150 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 + I L+ A +L L+ + M +N +++ D + + + + + +MD Sbjct: 151 TQVIRLENISAAKLIPVLRPLVPQQAHMAAYAPSNAIIISDIASNIRRIVEIIDRMDRSA 210 Query: 179 GQ 180 Q Sbjct: 211 IQ 212 >UniRef50_A9IRR4 General secretion pathway protein D n=12 Tax=Proteobacteria RepID=A9IRR4_BORPD Length = 862 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 26/296 (8%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 ++ D TN L++ + +L + + Q+D QV + + IV ++++ E G+ Sbjct: 380 GGGATVQADPSTNTLIISAPEPLYRSLREVIDQLDQRRAQVLVESLIVEVSQEKAAEFGI 439 Query: 201 KW--TLADAQHAGGVGQVTTLGSDLSVATATTHV------GFNIGRINGR---------L 243 +W +G +G GS + A G +G + G Sbjct: 440 QWMTGAGSLDGSGFIGGTNLGGSGIGSAGTGATTLDALGRGLTLGLVKGTVDVLGNQVIN 499 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS--------GESGATSV 295 L++ AL+ + +I+++P LL +PASI G +P+ + ++ Sbjct: 500 LNVLARALQNSGEANILSTPNLLTLDNEPASILVGKTVPFVTGQYVTSGSAGSNNPFQTI 559 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 E ++ L + + P + + G ++L ++ + + + +K+ I+T V V G Sbjct: 560 EREDIGLKLNIRPQISEGGAVKLDIYQEVSSIDEASSSETTGL-VTNKRAIDTSVLVDDG 618 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + LGG+ + S +VP L IP G LFR+D ++ + L+VF+ P +V Sbjct: 619 QIIVLGGLLEDRVTSTTSAVPGLSSIPLLGALFRYDKRQRTKSNLMVFLRPFVVRD 674 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 72/203 (35%), Gaps = 20/203 (9%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-HLTDVPWKQAL 71 Q V+L D + VL+AL+ + N +V P V G ++L V AL Sbjct: 25 ALAQARPADQHVSLNFVDTDIPAVLRALSLFTQRNYLVDPRVKGKLTLVSERPVDRDTAL 84 Query: 72 QTV---VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQAN-------------L 115 + ++ G + + V A + A+ AR A Sbjct: 85 TMLAGALRMQGFAIVEVDGVTRVVPEADAKLQGSAVVADAARGAAGPMPMADFARGARGS 144 Query: 116 PLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + R +L+Y +A L L+ + N L++ D L + + +A++D Sbjct: 145 EVVTRVFSLKYENAANLLPVLRPLVPPNNPINAYPGNNTLVVTDYADNLERIARVIAKVD 204 Query: 176 LPVGQVELSAHIVTINEKSLREL 198 +P + +V + +L Sbjct: 205 VPSA---IDTDVVPVKYGVASDL 224 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 8/90 (8%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG-------SM 146 + +N+ R A+ ++ + ++Y A +LA +LL A+G +M Sbjct: 186 VTDYADNLERIARVIAKVDVPSAIDTDVVPVKYGVASDLASLATQLLDAQGGDTAQRIAM 245 Query: 147 TVDKRTNRLLLR-DNKTALSALEQWVAQMD 175 D RTN +L+R + + ++D Sbjct: 246 VADPRTNSVLVRAGSPARTRLARDLIRKLD 275 >UniRef50_B1J8A0 Type II and III secretion system protein n=7 Tax=Pseudomonadaceae RepID=B1J8A0_PSEPW Length = 625 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 83/409 (20%), Positives = 169/409 (41%), Gaps = 33/409 (8%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG--TVSLHLTDVPWKQA 70 P +++ + VTL D + + + L++ +N + D+ ++ + +V + A Sbjct: 177 FPQLRSKLERPVTLEFRDAELKVIFEVLSQVAGINFIFDKDLRPDMKATIFVREVRIEDA 236 Query: 71 LQTVVKSAGL-ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 + +++ L N L V+ + Q ++ L R+ L DA Sbjct: 237 IALLLEQNQLRQKIVNDNTLLVYPDSPQKTKDYQE------------LVMRTFYLTSIDA 284 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVT 189 + +L + + VD+R N L +RD A+ E+ + D +V L ++ Sbjct: 285 NTALNMVKTMLKTR-DVFVDERLNTLTMRDTPDAVRMAEKLLQSQDQSNPEVVLEVEVME 343 Query: 190 INEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELS 249 + + +LG++W + V+ L + + + +++ Sbjct: 344 VARSRILDLGLQWPNTFGVLSDEGNPVSVLDQLRGINSGRISI--------SPAPQAKIN 395 Query: 250 ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT------SVEFKEAVLG 303 A Q + ++ +ASP + S+ + A I G +P ++ SV + + L Sbjct: 396 A--QDKDINTLASPVIRVSNREQARIHIGQRVPIISATSVPSTQGPVITESVTYLDVGLK 453 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLA-IDKQEIETQVEVKSGETLALGG 362 +EV PTV + +K+ + + + G + +D + +T + + GET L G Sbjct: 454 LEVQPTVHLNNEVAIKVALEVSNATPLEPTRQGTIPVQVDTRNAQTSLRLHDGETQVLAG 513 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + S + +P LGDIP G+LF + + + ELV+ ITPR+V + Sbjct: 514 LVRNDKTSSGNKIPGLGDIPGLGRLFGSNRDDMSKSELVLAITPRIVRN 562 >UniRef50_Q7NA54 Similarities with protein transport protein HofQ of Escherichia coli n=2 Tax=Photorhabdus RepID=Q7NA54_PHOLL Length = 344 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 142/321 (44%), Positives = 195/321 (60%), Gaps = 6/321 (1%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK----LLSAKGSMTVD 149 + + ++ +++ S LQYADA +A + L++ +G + D Sbjct: 25 VPPMIETEEQSVELFDQSVNETEIQSLSTVLQYADAERIAMNLRQNTPALITKEGKVDFD 84 Query: 150 KRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQH 209 TN L+L+D A++ ++ W+ ++D P QV+++AHIVT + ++L ELG+ W + + Sbjct: 85 PETNSLILQDTPIAIAQIKSWLKEIDTPQQQVQITAHIVTSSREALHELGIYWGMPIGEQ 144 Query: 210 AGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASH 269 + L + + FNI RI+ LL++ELSALEQ+ QLDIIASPRL ASH Sbjct: 145 INTSTGINRLNINQAANDNMHRFAFNIARIHTSLLEMELSALEQENQLDIIASPRLTASH 204 Query: 270 LQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQ 329 Q ASIKQGS+IPY S E ++V+FKEAVLGMEVTP +L+K +IRL L ISQN+PG Sbjct: 205 QQLASIKQGSDIPYV--SQEKEKSTVQFKEAVLGMEVTPHILRKNKIRLSLKISQNMPGI 262 Query: 330 VLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFR 389 + Q GE L IDKQEI TQV VK+GETL LGGIF +K VP L DIP G LF Sbjct: 263 SISQGGGENLTIDKQEIITQVTVKNGETLILGGIFQQKKGEQTQKVPYLSDIPLLGSLFN 322 Query: 390 HDGKEDERRELVVFITPRLVS 410 + RRELV+FITP+L+ Sbjct: 323 QKAHKHSRRELVIFITPQLMD 343 >UniRef50_Q0AKZ0 General secretion pathway protein D n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKZ0_MARMM Length = 686 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 11/279 (3%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 ++ ++ D+ N L++R + V +MD+ QV + A I + + + GV Sbjct: 385 QSRLTIIPDELNNALIIRATDQEYREILDLVQRMDVMPPQVLIEATIAEVRLEDGLDFGV 444 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDII 260 +W +A + +TA GFN +G L LSAL + ++ Sbjct: 445 RWYFENAGSN--ETSSLQFSDSNTGSTAPVFPGFNYA-FSGTDLTATLSALRSITDVTVL 501 Query: 261 ASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKEAVLGMEVTPTVLQK 313 ++P ++ + Q A ++ G E+P + S +SVE +E + ++VTP + Sbjct: 502 SAPSIMVQNNQTAHLQVGDEVPIVTQTATSVTESNAPIVSSVELRETGVILQVTPRINAS 561 Query: 314 GRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 G + L+++ + + + I K E + V V+S T+ALGG+ + Sbjct: 562 GMVVLEVNQEVSSVRPTTT-SGIDSPTIQKLEFTSTVSVRSSNTIALGGLIRETTSDNES 620 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 PLLGDIP G LFR+ +R ELV+F+TPR++ ++ Sbjct: 621 RTPLLGDIPGVGNLFRNRAMTSQRSELVIFLTPRIIWTD 659 Score = 54.8 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 57/165 (34%), Gaps = 4/165 (2%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQAL-AEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 P + + L DVPVA V++ + + ++V+ V+G +SL + +A Sbjct: 92 PNRADLDSRTLRLNFVDVPVADVVRTIVGDALGQTVMVADGVTGRISLTSAEPAPARAAL 151 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 +++ + + +L+ + + + + L R + + + + Sbjct: 152 AALET---VLGESNLVLAERAEGYLLTRLDMARPGLTGLSSELGYGGRVVPVTHTTPSAI 208 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 + LS + + L+L + + D P Sbjct: 209 VSLIDPFLSDRVEVVPHDALGVLVLAGPGPDVDGARRAAILFDRP 253 >UniRef50_A3ZUT9 Type IV pilin multimeric outer membrane protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUT9_9PLAN Length = 719 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 99/412 (24%), Positives = 178/412 (43%), Gaps = 36/412 (8%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 +T+++ D + +VL+ L+EQ LN++ + V GTVS L+ V + AL +++S G Sbjct: 172 DDGLTIVIQDTDIREVLEMLSEQGNLNILPTNSVRGTVSASLSKVDVQTALNAILRSTGY 231 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL-------- 132 IT +E N + V + A + + ++ R Y A +L Sbjct: 232 ITLEENNFIYVGTPAELHAMNNMADR----------VQTRIYRPNYVRAVDLQTLLTPLL 281 Query: 133 -AKAGEKLLSAKGSMTVDKRTNR-----------LLLRDNKTALSALEQWVAQMDLPVGQ 180 A+ G +S+ + + +N +++RD + L+ +++ V ++D Q Sbjct: 282 TAEVGVISVSSASQVGISADSNAAGGDDFAGTEAVIVRDFEHKLNEIDEAVRELDRRPLQ 341 Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN 240 V + A I+++ LGV + ++ + V+ T G G ++ Sbjct: 342 VAIEATILSVKLDDSLNLGVNFEALIDKNKVRL--VSGFPLSALDQIKLTDGGLKFGFLD 399 Query: 241 GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQ--VSSGESGATSVEFK 298 L + + ALE +IASP+LL + Q A I G + Y + + SVEF Sbjct: 400 SS-LGVFIDALESFGDTSVIASPQLLVLNKQRAEILIGEQKGYISTTVTETASTQSVEFL 458 Query: 299 EAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETL 358 E + + P + G +RL++H + G V + + ++ T V G T+ Sbjct: 459 EIGTQLRLRPFITDDGMVRLEVHPEISD-GDVKVEGQFTLPNKIVTQVTTNVICPDGRTI 517 Query: 359 ALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +GG+ + +P LG IP G FR + R EL+V +TPR+V Sbjct: 518 IIGGLIKSDLRKKGSQIPYLGSIPILGPAFRQKQETTVRDELIVLLTPRIVD 569 >UniRef50_C6XJ47 General secretion pathway protein D n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJ47_HIRBI Length = 660 Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats. Identities = 96/460 (20%), Positives = 182/460 (39%), Gaps = 73/460 (15%) Query: 15 GVQAAKPQKVTLMVDD--VPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 G A + TL+V D +++V + +A+ + D S T+++ LT++ + Sbjct: 167 GQLTASGESNTLIVVDYAANISRVRKVVAQ-------IDEDQSETLTIALTNMSATEMAN 219 Query: 73 TVVKSAG-----------LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRS 121 TV + N L V + A + Sbjct: 220 TVNSMKSTGRGSAGFKVTATAVESNNSLIVKGDIKDVAEVHEIVRNLDVANREDDASLKV 279 Query: 122 ITLQYADAGELAKAGEKL-------------LSAKGSMTVDKRTNRLLLRDNKTALSALE 168 ++L++++A ++A E + S+ + + + TN L++ + L LE Sbjct: 280 LSLKHSEAKDIAPILEMMGQRLAEQARPGANASSVPKIAIYEPTNSLVVSASPMVLRQLE 339 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD----LS 224 + V ++D QV + A IV +++ + RELG+++ L+ + + T LS Sbjct: 340 RVVEELDQRRSQVLVEAIIVELSDNAARELGLEFVLSGSGSSATPFAATNFTRSTTNVLS 399 Query: 225 VATATTHVGFNIG----------------------------RINGRLLDLELSALEQKQQ 256 +A A +G +G + ++A++ Sbjct: 400 LAGALALDSDTVGEETVSSLRSAAISSLLGSAGGLLGIGGQSSDGTIFGAIINAVDSDIT 459 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQV-----SSGESGATSVEFKEAVLGMEVTPTVL 311 +++++P LL + ASI G E+P ++ + +VE K + +EV P + Sbjct: 460 SNVLSTPHLLTMDNEKASITVGQEVPITTGEALGTNNSNPFRTVERKPLGVTLEVEPQIG 519 Query: 312 QKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 + I+L L + + DG + +EI T + GE + LGG+ + Sbjct: 520 EGDSIKLNLRQEVSSIFDSI---DGTDFITNNREINTTILADDGEIVVLGGLIQEEETLN 576 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VPLLGDIP G+LF +G +R L+VF+ P +V Sbjct: 577 ISKVPLLGDIPGVGRLFSSEGTTKKRTNLMVFLKPTIVRD 616 Score = 94.1 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 9/155 (5%) Query: 26 LMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTVVKSAGLI 81 + + DV ++ ++ ++ VV P V G VS+ LT+ Q + ++ G Sbjct: 48 MNLKDVDISVLIDDVSAITGHTFVVHPSVRGRVSVSSQTPLTNREVFQVFLSTLRVHGFT 107 Query: 82 TRQE-GNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 G + + + + E I L+ DA E AK + + Sbjct: 108 AIPSRGGVYKIVPEQSASAEAGLARP----SVGGDQFETAVIRLRNFDATEAAKMIKPIT 163 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + +G +T +N L++ D +S + + VAQ+D Sbjct: 164 NPQGQLTASGESNTLIVVDYAANISRVRKVVAQID 198 >UniRef50_B3PF18 General secretion pathway protein D n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF18_CELJU Length = 681 Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats. Identities = 81/377 (21%), Positives = 152/377 (40%), Gaps = 57/377 (15%) Query: 90 SVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA------- 142 V S + + + R + L+YA A ++AK ++ + Sbjct: 248 VVISGDDMSRQRLKFLIDDLDRPQTKNANVRVVYLRYAKAEDVAKVLTGMMQSFTQSRQA 307 Query: 143 --------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 + + D TN +LL + + + V +D+ QV + A I ++++ Sbjct: 308 EGAAPNTQQPGVQADPATNSVLLTADVDTMDTMLSIVDSLDIRRAQVLVEAIIAEVSDED 367 Query: 195 LRELGVKWTLADAQHAGGVGQV---------------------------TTLGSDLSVAT 227 +ELG++W D ++ G T L + S + Sbjct: 368 GKELGIEWMYRDDKYGFGASANGSRGSIGGIGSAVLAASDKNASQDDKDTALANLASGLS 427 Query: 228 ATTHVGFNIGRINGR-LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS 286 + F GR+ R L ++ + +I+++P LL + A I G ++P++ Sbjct: 428 GLSGQMFGFGRLGERTDFLAVLKLMQSSSKTNILSTPSLLTTDNNQAVISVGRQVPFRTG 487 Query: 287 SGESGAT-----------SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQAD 335 S + T ++ ++ L +EVTP + + I L + + V + Sbjct: 488 SYSAVGTGGNSTIGSPFTTINREDVGLKLEVTPHINEGDSIVLDIKQEVSSLSDVSSEDG 547 Query: 336 GEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKED 395 + +K+EI+TQ+ GET+ LGG+ T + ++G+ VP+LG IP GQLFR Sbjct: 548 ---IITNKREIQTQILSSDGETIVLGGLITDEVQTGERRVPVLGSIPVLGQLFRSQTSSK 604 Query: 396 ERRELVVFITPRLVSSE 412 + L+VFI +V + Sbjct: 605 SKTNLLVFIRATVVRDD 621 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 64/164 (39%), Gaps = 6/164 (3%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV----SLHLTDVPWKQALQ 72 A Q T+ +D + +V++ +A +++ P V G + S LT + Sbjct: 36 NAQGEQTWTVNFNDTDIQEVIKFIAGATGKTIIIDPKVRGPIKVINSKPLTSKEVYELFL 95 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGEL 132 + G + GNI+ + + N E + I L+ A ++ Sbjct: 96 ASLDVYGFTAVESGNIVRIVANRDARNLPIPTEKNVNVRDDLY--ITQVIPLKNTSAAKI 153 Query: 133 AKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 A L+ G +T + +N L++ D + ++ + + V Q+D Sbjct: 154 LAALRPLVPQYGHLTTYEPSNALIITDTRANVARMNELVVQLDK 197 Score = 55.1 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 10/145 (6%) Query: 44 EKLNLVVSPDVSGTVSLHLTDVPWKQALQTVV-KSAGLITRQEGNILSVHSIAWQNNNIA 102 + N+ V D+ T + L + + L + + I N+A Sbjct: 127 TEKNVNVRDDLYITQVIPLKNTSAAKILAALRPLVPQYGHLTTYEPSNALIITDTRANVA 186 Query: 103 RQEAEQARAQANLPLENRSITLQYADAGELAKAG---------EKLLSAKGSMTVDKRTN 153 R + + I L+YA+A E+ + ++ + DKR N Sbjct: 187 RMNELVVQLDKIGITQTDVIPLRYANATEVVNMLTQLEKPDPNRGMTTSPPVIVADKRIN 246 Query: 154 RLLLRDNKTALSALEQWVAQMDLPV 178 +++ + + L+ + +D P Sbjct: 247 AVVISGDDMSRQRLKFLIDDLDRPQ 271 >UniRef50_B2I1Y0 Type II secretory pathway, component PulD n=18 Tax=Acinetobacter RepID=B2I1Y0_ACIBC Length = 758 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 137/339 (40%), Gaps = 30/339 (8%) Query: 101 IARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN 160 + + +I L S+ D N L+++ + Sbjct: 315 NNQNSGSNTSGSNGASISTPAINLNGNSNSSNQNNITSFNQNGVSIIADNAQNSLVVKAD 374 Query: 161 KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLG 220 + +E + Q+D+ QV + A I+ ++ +LG++W L D G+ + +G Sbjct: 375 PQLMREIESAIQQLDVRRQQVLIEAAIIEVSGDDADQLGIQWALGDLSSGIGLLSFSNVG 434 Query: 221 SDLSVATAT--------------------THVGFNIGRINGRL--LDLELSALEQKQQLD 258 + LS A +G + + AL+ + + Sbjct: 435 ASLSSIAAGYLSGGSAGAASAIANGANKGNGATLGLGNFDNSRKAYGALIQALKTNTKSN 494 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT------SVEFKEAVLGMEVTPTVLQ 312 ++++P ++ + A I G +P+ S + +T +VE K+ + ++V P + + Sbjct: 495 LLSTPSIVTMDNEEAYIVVGQNVPFVTGSVTTNSTGINPYTTVERKDVGVTLKVVPHIGE 554 Query: 313 KGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQ 372 G +RL++ + QA V K+ I+T V + G+T+ LGG+ + + Sbjct: 555 GGTVRLEVEQEVSAVQDSRGQAADLV--TSKRAIKTAVLAEHGQTVVLGGLVSDDTSLSR 612 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +P L IP+ G+LFR D + + +R L+VFI P +V Sbjct: 613 QGIPGLSSIPYVGRLFRSDNRSNVKRNLLVFIHPTIVGD 651 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 6/164 (3%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQAL 71 +A Q + + D + + +A+ N V P V G V++ L Sbjct: 24 SSSAYAQTWKINLRDADLTAFINEVADITGKNFAVDPRVRGNVTVISNKPLNKDEVYDLF 83 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 V+ G++ GN + + + N+ ++ + R I L+ + + Sbjct: 84 LGVLNVNGVVAIPSGNTIKLVPDSNVKNSGIPYDSRNRVR--GDQIVTRVIWLENTNPND 141 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 L A L+ M TN L++ D + LE + +D Sbjct: 142 LIPALRPLMPQFAHMAAIAGTNALIVSDRAANIYQLENIIRNLD 185 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 9/95 (9%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL---------SAKG 144 ++ + NI + E + +ITLQ + A E+ E + A+ Sbjct: 167 VSDRAANIYQLENIIRNLDGTGQNDIEAITLQSSQAEEIITQLEAMSATGASKDFSGARI 226 Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 + D RTNR+L++ + + + +D+P Sbjct: 227 RIIADNRTNRILIKGDPQTRKRIRHMIEMLDVPSA 261 >UniRef50_Q0A5Z6 General secretion pathway protein D n=2 Tax=Ectothiorhodospiraceae RepID=Q0A5Z6_ALHEH Length = 673 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 77/408 (18%), Positives = 162/408 (39%), Gaps = 48/408 (11%) Query: 50 VSPDVSGTV-SLHLTDVPWKQALQTVVKS-------AGLITRQEGNILSVHSIAWQNNNI 101 V D G + + L + ++ V + L + SV + + Sbjct: 190 VDRDTEGEIEVIQLEHAAASEVVRMVRELEDEEREGRRLRVVADERANSVMIAGDRQRRL 249 Query: 102 -ARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA-------------KGSMT 147 R Q ++ + + L++ADA EL E + ++ + Sbjct: 250 LVRALIGQIDSEVAAEGTAQVVYLRFADAEELVPVLEGIGTSLLESRGGNDAGGQGLDIR 309 Query: 148 VDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADA 207 TN L++ L +L + ++D+ QV + A I +++ + ELGV+W + Sbjct: 310 AHSSTNALVMNGPADVLRSLRSVLNRLDIRRAQVLVEAVIAEVSQDRVEELGVQWGVLSE 369 Query: 208 QHAGGVGQVT-------------------TLGSDLSVATATTHVGFNIGRINGRL-LDLE 247 G+ + GS + +G + G + Sbjct: 370 DRGVGLINFGGAAGAGGGIADVIRAAGAISDGSTADLPQVGDGAAIGVGDLRGSTQVAAL 429 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS----SGESGATSVEFKEAVLG 303 + AL +I+++P L+ + A I G +P+ +S++ ++ + Sbjct: 430 IRALSGDSASNILSTPSLMTMDNEEAEIVVGQNVPFITGRAIEDSGQAFSSIQRQDVGVQ 489 Query: 304 MEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGI 363 + + P + + ++L++ + +Q A V D + + T V V++G+ + LGG+ Sbjct: 490 LRIRPQINEGDTLKLEIEQEVSSVSGGIQGAADLV--TDLRSVRTSVMVENGQMVVLGGL 547 Query: 364 FTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + ++ +VPLLG++P G+LFR+D + E+R L+VF+ P ++ Sbjct: 548 IDDQLRTRSQAVPLLGNLPGLGRLFRYDRSQVEKRNLMVFLRPVIIRD 595 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 66/167 (39%), Gaps = 7/167 (4%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWK-----Q 69 V A + + +TL D + +V+ ++++ +N +V P V G V++ ++ P Q Sbjct: 28 PVLAEEDEGITLNFQDADLREVVALVSQETGVNFIVDPRVRGDVTI-VSQTPVDADGLYQ 86 Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 + +K G + + A + + + R+ R I + + +A Sbjct: 87 VFLSALKIHGFAAVPTPEAVRIIPRAQARQDRIPSDGDTTRS-LGDQAVTRVIRVDHVNA 145 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 EL L+ G + N L++ D + LE + ++D Sbjct: 146 AELVPVLRPLVPQDGHLAAYSPANSLIISDTAANVDRLEVLIGRVDR 192 >UniRef50_Q3JD22 General secretion pathway protein D n=2 Tax=Nitrosococcus oceani RepID=Q3JD22_NITOC Length = 833 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 80/354 (22%), Positives = 133/354 (37%), Gaps = 32/354 (9%) Query: 85 EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL---- 140 + L + A QE E QA+ S + AG + Sbjct: 434 QMGGLRGFKASRGAAPDASQEEELRAFQASTENATESPQASGSAAGGIKFTLPGAKDDED 493 Query: 141 -SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 + + D N LL+ + + Q+D+P QV + A I + + G Sbjct: 494 KKPEVRVIPDVENNTLLISAPPPVYEKILVALHQLDIPPRQVLVEATIAEVTLTDDLQYG 553 Query: 200 VKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRING-RLLDLELSALEQKQQLD 258 V+W + G LG A F G + + L L + ++ Sbjct: 554 VRWFFEN------TGVKDYLGRGALTAAIPGTSTFTYGLFDAAGAARIVLDTLSSQTKVK 607 Query: 259 IIASPRLLASHLQPASIKQGSEIPYQVSS----GESGATSVEFKEAVLGMEVTPTVLQKG 314 +++SP+LL Q A I+ G +IP Q S G + T ++F++ + + VTP V G Sbjct: 608 VLSSPQLLVLDNQTAEIRVGDQIPIQTGSTIGIGGNSTTRIQFRDTGVLLTVTPRVNAGG 667 Query: 315 RIRLKLHISQNVPGQV----------------LQQADGEVLAIDKQEIETQVEVKSGETL 358 R+ ++L G Q G ++ + V V+SG+T+ Sbjct: 668 RVTMELTQEVTDVGGTKLPTSAAPSGDGDDDNNNQTVGNNPTFLQRSFRSVVTVQSGDTI 727 Query: 359 ALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 LGG+ + +P L +P G LF K R EL+V +TPR+V ++ Sbjct: 728 VLGGLIRDNERFSDSGLPFLHKLPLIGPLFGATAKSKSRTELIVLMTPRVVRNQ 781 Score = 94.4 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 7/168 (4%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQAL- 71 P + + L ++ + +V++ L + + N V+ V GTV++ K AL Sbjct: 94 PRTFQVREGAILLNFENTDIREVVKTILGDILEENYVIDRAVQGTVTVQTGRPLPKDALM 153 Query: 72 ---QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 +T+++ Q + + + +A++ R + L Y Sbjct: 154 PTLETLLRLNNAALIQAEGLNKIVPLNQAVQGNLSPRLSRAKSTVGYD--VRIMPLDYIG 211 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 AGE+ K E + G + VD N L+L L ++ + D+ Sbjct: 212 AGEMEKILEPFVPKDGLVRVDPARNLLILAGTAKELDQWQETIDIFDV 259 >UniRef50_Q0ASR3 General secretion pathway protein D n=2 Tax=Hyphomonadaceae RepID=Q0ASR3_MARMM Length = 650 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 90/435 (20%), Positives = 171/435 (39%), Gaps = 58/435 (13%) Query: 35 QVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSI 94 + +A ++ + D S + LT+V + + + T E + +I Sbjct: 165 DYAENIARLRQVIRDLDRDTSVVEMVELTNVSAGDMTRILQQMRTSSTAGEDETIFNVAI 224 Query: 95 AWQNNNIAR-------------QEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS 141 A + + + + R I L +AD L ++++ Sbjct: 225 APIPASNTVLLRGNRDAVDRMIALVRRVDSVSQSNRSFRVIYLSHADGEHLLPILQQVVD 284 Query: 142 A---------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 S++ TN L++ + LE + Q+D+ QV + IV +++ Sbjct: 285 TLVAGEGTTRAPSVSHHAPTNALVINADPDVQRQLELVIRQLDIRRPQVLVEGIIVEMSD 344 Query: 193 KSLRELGVKWTLADAQHAGG----------------VGQVTTLGSDLS------------ 224 + RELGV+ LA + G T+ G D S Sbjct: 345 STARELGVQMLLAGGEGDTPLAMTRFSSNNPDLLALTGAATSPGDDDSDLNVSLRDAAIN 404 Query: 225 --VATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 + + +GF +G L L L+A+E +++A+P ++A + A G EIP Sbjct: 405 SLLGASGGTLGFGGQNGSGNLFGLVLNAVESDVNSNVLATPSIMALDNEEAYFLSGQEIP 464 Query: 283 YQVS-----SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGE 337 + + +V+ +E + + V P + + +RL + + + + Sbjct: 465 VTTGEALGSNNTNPFRTVDREEVGVKLTVLPQITEGNTVRLHIVQEVSSVAGAVNAGSSD 524 Query: 338 VLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDER 397 + +K+EI T V +GE + LGG+ ++++ +D VP L +P G+LFR +G R Sbjct: 525 L-ITNKREISTTVLADNGEIIVLGGLIQQEDEISEDGVPGLRRLPGVGRLFRSEGSTTRR 583 Query: 398 RELVVFITPRLVSSE 412 L+VFI P ++ SE Sbjct: 584 TNLMVFIRPTIIRSE 598 Score = 94.1 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 64/180 (35%), Gaps = 8/180 (4%) Query: 2 KQWIAALLLMLIPGVQA-AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 K +AAL ++ + + A+ Q + + + V+ ++ +V P+V G V++ Sbjct: 6 KNALAALCVLSVLVLAPMARAQDQVVNFNQAEIQAVIDDVSAVTGYTFIVDPNVRGRVTI 65 Query: 61 H----LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 LT + Q + ++ G + A R Sbjct: 66 TSQAPLTSDQYFQVFLSTMRVHGYTVVPTASGAYQIVPDQAGARSANPVNSNLR---GDQ 122 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + L + + + L+ A+GS+ + N L++ D ++ L Q + +D Sbjct: 123 YVTAVVRLNHVASRDALAVVRPLIGAQGSVNATETGNVLVMVDYAENIARLRQVIRDLDR 182 >UniRef50_Q1YQU4 Putative general secretion pathway protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQU4_9GAMM Length = 629 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 89/459 (19%), Positives = 184/459 (40%), Gaps = 60/459 (13%) Query: 5 IAALLLMLIPGVQA-----AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS 59 +A L+ +L P + + A Q +++V DV + +L+ + L+ P ++ Sbjct: 136 VATLVPVLKPVMSSGARLNAFTQSNSMVVTDVQ-SNILRLESLIADLD---DPTLNAVEV 191 Query: 60 LHLTDVPWKQALQTV-----VKSAGLITRQEG-NILSVHSIAWQNNNIARQEAEQARAQA 113 + L ++ +A+ +K+ L ++G N + S + + + Sbjct: 192 IRLKNISAGEAVYIAGQLKQLKNQDLSLVEDGMNNRVIISGTASARRAFKAMLKTLDQPS 251 Query: 114 NLPLENRSITLQYADAGELAKAGEKLLSAKG------------------SMTVDKRTNRL 155 I L Y+ A E+ E +L + + +D+ N L Sbjct: 252 TKKGSVEVIYLDYSRAAEMKPIVEGMLQSDVFLQLAGEAVADKKAKAAYQIQIDELNNAL 311 Query: 156 LLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQ 215 ++ + ++ VAQ+D QV + A I ++E +EL + + G + Sbjct: 312 VVAAPTAVIREIKNVVAQLDRSRPQVLIEAVIAELSEDQAQELSSQLAYSSKNRGGYLTN 371 Query: 216 VTTLGSDLSVATATT----------------HVGFNIGRINGRLLDLELSALEQKQQLDI 259 L + L+ + V + G+ + L + AL+ I Sbjct: 372 FDGLLATLTGLGISGVEPTAAELGLLPKKVMAVAGDFDSETGKGIGLLIQALKTDGSTKI 431 Query: 260 IASPRLLASHLQPASIKQGSEIPYQVSS-------GESGATSVEFKEAVLGMEVTPTVLQ 312 +++P ++ + A++ G E+P+Q S + T++ +E + ++V P + + Sbjct: 432 LSTPSVVTLDNEEATLSVGEEVPFQTGSFTSSNNGSNNPFTTINREEVGVKLKVKPQISK 491 Query: 313 KGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQ 372 +RL++ + ++ + K ++T V ++ GE L LGG+ + Sbjct: 492 GDSVRLEIEQESS----KVKSGVPGLQTTSKSTMQTNVLIQDGELLILGGLIEDQTGGSA 547 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VPLLGDIP G+LFR K D + L++FI P ++ + Sbjct: 548 TKVPLLGDIPLLGRLFRSTSKADSQSVLMMFIRPTIIRT 586 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 77/182 (42%), Gaps = 12/182 (6%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 + + + AL ++L + + + V + D + V++++AE + V+ P V G V++ Sbjct: 12 IIRLLGALSIVLSMIAEISAGEVVRINFRDADIRSVIESVAEITGKSFVLDPRVKGKVTI 71 Query: 61 HLTDV----PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + +A+ + ++ G ++G + + Q A + Sbjct: 72 IAPEAIDSDLLYEAVLSAIQVQGFQAIEDGAVTRIVPFT--------QAFNFAGGAGDNR 123 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 L + I +++ L + ++S+ + ++N +++ D ++ + LE +A +D Sbjct: 124 LITKVIQIEHVQVATLVPVLKPVMSSGARLNAFTQSNSMVVTDVQSNILRLESLIADLDD 183 Query: 177 PV 178 P Sbjct: 184 PT 185 >UniRef50_Q3A7J9 Type II and III secretion system protein n=2 Tax=Desulfuromonadales RepID=Q3A7J9_PELCD Length = 537 Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats. Identities = 88/458 (19%), Positives = 162/458 (35%), Gaps = 67/458 (14%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + + + D P + L E N+VV P VSGTVSL+L V + + + G Sbjct: 44 EEPRFDVFAKDTPAQEFFTGLVEGTPYNMVVHPSVSGTVSLNLKAVTIPEIMDVLRDVYG 103 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN-------------------- 119 R + V Q R + + Sbjct: 104 FQYRTTRSGFQVIPDTLQTQVFYVNYLNLVRKGLSQTRVSSGQVSEAGSGDDDDDSGSNR 163 Query: 120 -------------RSITLQYADA-GELAKAGEKLLS--AKGSMTVDKRTNRLLLRDNKTA 163 R T AD EL+ A ++ + + + +++R Sbjct: 164 SRRDDGNAMVSGSRIDTESSADFWTELSVALRTMVGQEDGRRVVIQPQAGVVVVRALPEE 223 Query: 164 LSALEQWVAQMD-LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHA-----GGVGQVT 217 L +EQ++ + QV L A I+ + + G+ W+ + + G + Sbjct: 224 LRTIEQYLGTIQGNLQRQVILEAKILEVELGDGYQAGINWSAVNGDVSMAQTRGDIFADN 283 Query: 218 TLGSDLSVATATTHVGFNIGRING--------RLLDLELSALEQKQQLDIIASPRLLASH 269 L + A G G G + + LE + + +++SPR+ + Sbjct: 284 GLADIVGSDGAAVTSGLASGAFGGVFSAALNFKNFQAFIELLETQGDVQVLSSPRIATVN 343 Query: 270 LQPASIKQGSEIPYQVSSGESG--------ATSVEFKEA--VLGMEVTPTVLQKGRIRLK 319 Q A IK GS+ + + + + ++VTP + KG++ L Sbjct: 344 NQKAVIKVGSDEFFVTDVSSDTVTGTTTTTSPDITLTPFFSGIALDVTPQIDPKGKVTLH 403 Query: 320 LHISQNVPGQ-----VLQQADGEVL-AIDK-QEIETQVEVKSGETLALGGIFTRKNKSGQ 372 +H + + + + A +E ++ V +SG+ + +GG+ + ++ Sbjct: 404 IHPTVSEVSDQTKDITVAGETQTLPLAFSTVRESDSIVAAESGQVVVIGGLMKDQLQNRD 463 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 SVPLLG +P G LFRH + ELV+ + P +V Sbjct: 464 ASVPLLGRLPGVGALFRHTQSVSRKSELVILLRPMVVE 501 >UniRef50_Q221L0 Type II and III secretion system protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221L0_RHOFD Length = 702 Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats. Identities = 82/388 (21%), Positives = 146/388 (37%), Gaps = 59/388 (15%) Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR-----SITLQYADAGELAK 134 L+ N L + + + + ++ A L + L+ ADA +LA Sbjct: 252 LVAEPRSNALILRAANPARVALVKSLVDKLDQPAAPGLNGEAGNIHVVYLKNADATKLAA 311 Query: 135 AGEKLLS--------------------------AKGSMTVDKRTNRLLLRDNKTALSALE 168 ++ G + D TN L++ + L Sbjct: 312 TLRAAMTGQAPAAAAPGVAAAATVAVVAATQSTTGGQIQADVATNSLIITAPEPQYRQLR 371 Query: 169 QWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT- 227 + ++D QV + + IV +N E G++W G G + LG++ A Sbjct: 372 AVIDRLDGRRAQVLVESLIVEVNADRAAEFGIQWQ--GPLGKAGDGVIGLLGTNFGAAGK 429 Query: 228 -----------ATTHVGFNIGRI----NGRLLDLELSALEQKQQLDIIASPRLLASHLQP 272 G N G + +L + LE +++++P LL + Sbjct: 430 NIINLATGAGAVAPGAGLNFGAVQRTNGVYVLGFLANFLETSGSGNVLSTPNLLTLDNEE 489 Query: 273 ASIKQGSEIPYQVSSGESGAT---------SVEFKEAVLGMEVTPTVLQKGRIRLKLHIS 323 A I G +P+ S S T +VE K+ L ++V P + + G +++ ++ Sbjct: 490 AKIVIGENVPFVTGSYTSNNTSGASVNPFTTVERKDVGLTLKVKPQINEDGTVKMVIYQE 549 Query: 324 QNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPW 383 + + + D K+ IE+ V V G + LGG+ K QD VP LGD+P Sbjct: 550 TSAV-KAGTEKDANGPTTSKRTIESTVLVDDGSIVVLGGLLQDKYSGNQDKVPGLGDVPL 608 Query: 384 FGQLFRHDGKEDERRELVVFITPRLVSS 411 FG LF+ + + + L+VF+ P +V Sbjct: 609 FGNLFKSEARTRNKTNLMVFLRPVVVRD 636 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 64/178 (35%), Gaps = 6/178 (3%) Query: 5 IAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD 64 + + L+ + + VTL + + V + +A N+VV P V GT++L Sbjct: 28 LFPINLLAQASAVSKPGEAVTLNFSNADIEAVARTMATITGTNVVVDPRVKGTLTLVTDK 87 Query: 65 VPWKQA----LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQA--NLPLE 118 ++A Q ++ G + + V A + Sbjct: 88 PVSRRAAMNQFQAALRLQGFTMVESAGLYKVVPEADAKLQSGAVTVSDEAIGGALGNQIT 147 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + L + A L L+S ++ V+ TN L++ D L + + +A +D+ Sbjct: 148 TQIFKLNFESANNLVAVLRPLISPNNTINVNPGTNSLVITDYADNLRRMARIIAAVDV 205 >UniRef50_C4XH25 General secretion pathway protein D n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH25_DESMR Length = 685 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 86/364 (23%), Positives = 153/364 (42%), Gaps = 33/364 (9%) Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 Q V + GL+ + + + N+ + + A A+ + N T G+ Sbjct: 282 QYVAQVKGLLAKLD------VPNPMEQGNLHVYKLQHADAENLSKVLNELFTKGSTATGD 335 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 AKA +S + DK TN LL+ + ++Q V ++D P QV + A I+ ++ Sbjct: 336 AAKAQAPTVSGGFNFVADKSTNSLLVTAAPEDFAFVDQVVKKLDAPRKQVYVEALIMEVS 395 Query: 192 EKSLRELGVKWTLADAQHAGGVGQ------------------VTTLGSDLSVATATTHVG 233 GV +A+ Q G G+ ++ + + Sbjct: 396 TDKSVSFGVNLNVANKQSGLGDGKYGGLLFASSNPAGYESLYNSSGAFVPPAGGSLGGLA 455 Query: 234 F--NIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 F IG + L ++A + +IIA+P+L+ + A+I PY S Sbjct: 456 FPVKIGEVIYSNLQAMINASKSDNSFNIIATPQLMTLDNEEATITVAENRPYLTSQDVGQ 515 Query: 292 ATS------VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQ 344 +T+ ++K+ ++VTP + + I+LK+ + + + + G + K+ Sbjct: 516 STTDRPYQRFDYKDVGTTLKVTPQINEGDSIKLKVKQETSRIDETVTKETGALQPTTRKR 575 Query: 345 EIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFI 404 ET + ++GET+ L G+ + G VP LGD+P G LF++ DER L VFI Sbjct: 576 VTETTIMCRNGETIVLSGLIGKSRAEGNSKVPGLGDVPVVGWLFKNKSVADERTNLYVFI 635 Query: 405 TPRL 408 TPR+ Sbjct: 636 TPRI 639 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 5/160 (3%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQALQTVVK 76 + +++ D V + ++ +++ N V+ V G V++ L+ + ++V++ Sbjct: 62 AKTISINFDGVDLRAFIKYISQVTGKNFVIDDAVKGNVTVISPKPLSPAEVYKVFESVLE 121 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP-LENRSITLQYADAGELAKA 135 G N + + + + + + LQ AGEL K Sbjct: 122 VNGYTALPTENFVKIVPAKTSRARSMPVIDGRETVTNPADAVVTQILPLQNIRAGELRKT 181 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 L+S G + TN L++ D + + + V Q+D Sbjct: 182 LAPLVSPDGMLADFADTNALIVTDYRPNIQRIIGIVDQLD 221 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 50/132 (37%), Gaps = 16/132 (12%) Query: 122 ITLQYADAGELAKAGEKLLS----------AKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 L++A A ++++ EKLLS K S+ ++RTN +++ ++ ++ + Sbjct: 232 FHLKHASAAKISQKLEKLLSQSAAKEGGGQTKISVVPEERTNAVIVLAEPQYVAQVKGLL 291 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTH 231 A++D+P + + H+ + L + + T G T Sbjct: 292 AKLDVPNPMEQGNLHVYKLQHADAENL------SKVLNELFTKGSTATGDAAKAQAPTVS 345 Query: 232 VGFNIGRINGRL 243 GFN Sbjct: 346 GGFNFVADKSTN 357 >UniRef50_C4UIB8 General secretion pathway protein D n=4 Tax=Yersinia RepID=C4UIB8_YERRU Length = 674 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 79/405 (19%), Positives = 161/405 (39%), Gaps = 48/405 (11%) Query: 31 VPVAQVLQALAEQEKLNLVVSPDVSGTV-SLHLTDVPWKQALQTVVKSAGLITRQEGNIL 89 +V + + E + P+V+G + + V + +++ Sbjct: 227 ASATEVTKLVTELLR------PNVAGKQDTAQMVKVVADERTNSIL-------------- 266 Query: 90 SVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA------- 142 S + A ++ + + I L+YA A +L + + Sbjct: 267 --ISGDPASRKSAESMIKKLDKEQISHGNTKVIYLKYAKAEKLLDVLNGVSVSIKDEKKK 324 Query: 143 ---------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 K + D +TN L++ + + LE+ + ++D+ QV + A IV + Sbjct: 325 VSHISNTIKKSMIKADDQTNSLIITASPNVMYDLEKVIEKLDIRRAQVLVEAIIVEAQDG 384 Query: 194 SLRELGVKWTLADAQHAGGVG-QVTTLGS--DLSVATATTHVGFNIGRINGRLLDLELSA 250 LG++W + G + + LG+ + + A G G G +A Sbjct: 385 EGINLGIQWDTKQKKVGGFISYNKSNLGNIQNGVTSIANGISGLTTGFYRGN-WSGLFTA 443 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEV 306 L +I+A+P ++ A G E+P Q +S + ++ + + ++V Sbjct: 444 LATNSSNEILATPSIVTLDNMDAEFSVGQEVPVLSSQQTTSTDKVYNTISRQSVGIMLKV 503 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFT 365 P + + + L++ + + + +K+ + V VKSGET+ +GG+ Sbjct: 504 KPQINKGDSVLLEIRQEVSSVAENSNVDKDNIGSTFNKRVVNNAVLVKSGETVVVGGLLD 563 Query: 366 RKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +K + + +PLLGDIP G LFR ++ E+R L++FI P ++ Sbjct: 564 KKVSNVINKIPLLGDIPIIGNLFRQKKEKIEKRNLILFIKPTIIR 608 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 6/181 (3%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL- 60 K + L+ + A ++ +D + + + +++ +++ P V G +S+ Sbjct: 33 KSGRVLVTLVFVIYTSNAYSSDFSVKFNDADIKEFINTVSKSLNKTIIIDPKVQGLISVR 92 Query: 61 ---HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPL 117 L + Q V+ G + N + + + + A + L Sbjct: 93 SYERLDKEKYYQFFLNVLDVHGFTVLEMPNNILKVIPSKRAKSSAPPILMKDDIFNGDEL 152 Query: 118 ENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 NR I L+Y A + +L + GS+ + TN LL+ + L + +++ D Sbjct: 153 INRIIPLKYISAKNVTPLLRQLNDNTDSGSVAHYEPTNSLLITGRAGTVKRLVEIISEFD 212 Query: 176 L 176 Sbjct: 213 R 213 >UniRef50_B2KC06 Type II and III secretion system protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC06_ELUMP Length = 527 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 91/472 (19%), Positives = 184/472 (38%), Gaps = 79/472 (16%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDV-SGTVSLHLTDVPWKQALQTV 74 + +KV++ V VP+A L +++ Q K+N ++S + + V+ L ++ ++AL T+ Sbjct: 59 ANSPLDRKVSIRVASVPIATFLNSISAQAKINFIMSEEFANKKVTASLNNITVREALDTL 118 Query: 75 VKSAGLITRQEGN---ILSVHSIAWQNNNIARQE-------------------------- 105 ++ GL ++ G + + N I + Sbjct: 119 LRVQGLTYQRIGKSDSYVVTKRSSDSPNTITKVYTLNYISLQGSNSTGNTNSPQSTFASS 178 Query: 106 ------AEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRD 159 +++ + + S + A + + ++S++G + +D RTN+L++ D Sbjct: 179 LNVNPNEQRSDMENLAEMVTDSAR-KGATGSDFLTIIQSVMSSQGKIAIDPRTNKLIVTD 237 Query: 160 NKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL 219 LE +A++D+ QV + A I+ +N+ S E+G+ + D G + Sbjct: 238 IPEIFPQLENILAELDIKPPQVLIEAQIIEVNKSSGLEIGLSYGGTDGTIFKFTGPARGV 297 Query: 220 GSDLSVATATTHVGFNI--------------------------------GRINGRLLDLE 247 D + G+ ++ + Sbjct: 298 DIDYVKGNGVSGWGYIFPPAGTGTGGSSGGDSGGGSTDGSGGNSNSPKDAFLDFSSFSIV 357 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY--------QVSSGESGATSVEFKE 299 L +L + + + P+++ + QPA I+ + S + + E K Sbjct: 358 LKSLLTRGEAKYLGKPKVVTINNQPAVIESTRDAAVGFASNLSGNTGSTNVVSQTAERKT 417 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 L ++VTP V ++G I L + S + + + T V VK+G+T+ Sbjct: 418 VGLTLKVTPQVNKEGYITLLIEPSYSSVANSAVSDGTK--DTLNRSASTLVRVKNGQTVV 475 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 LGG+ + + VPLLGDIP G LF E ++V+F+TP +++ Sbjct: 476 LGGLLSSREILEDRKVPLLGDIPLIGWLFTQRSTTKETTDMVIFVTPTILAD 527 >UniRef50_C6CIN5 General secretion pathway protein D n=1 Tax=Dickeya zeae Ech1591 RepID=C6CIN5_DICZE Length = 696 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 127/334 (38%), Gaps = 9/334 (2%) Query: 86 GNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG---EKLLSA 142 G+ + Q N + + A + L Sbjct: 310 GDSGMSMDAQLAQQQPGGMSSGQPVNPDGQAAGNGTAPVSGAGFSNDLGSLFGGGDALVR 369 Query: 143 KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW 202 + + D+ N L++ A+ + Q+D+ QV + A +V + + LG+ W Sbjct: 370 QIRVHADRDNNALIVSAPPDAMRQAASIIRQLDVRHEQVLVEAIVVEVQQAEGLNLGIAW 429 Query: 203 TLADAQHAGGVGQVTTLGSDLSVATATTHVGF--NIGRINGRLLDLELSALEQKQQLDII 260 + + G + G + +ALE ++ +I+ Sbjct: 430 GNRNYGGSNFNSVNVGNGFNQPNPLVNALKGTEGLVAGFYHGNWGTLFNALESNKRNNIL 489 Query: 261 ASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTVLQKGRI 316 A+P ++ A G ++P Q ++ ++ +V+ + + + P + Q G I Sbjct: 490 ATPSVVTLDNHRAEFNVGQDVPILTGSQTTNNDNIFNTVQRRTIGIKFSILPRINQSGTI 549 Query: 317 RLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP 376 L + + Q + + + V+V+ ET+ +GG+ + K + VP Sbjct: 550 LLNISQEISSLSDTAQVNSNLGSVFNIRTVNNVVQVQDDETVVIGGLLDDEKKETTNKVP 609 Query: 377 LLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 LLGDIPW G LFR+ + +++R L++FI PR++ Sbjct: 610 LLGDIPWLGNLFRYTSQNNDKRNLMLFIRPRIIR 643 Score = 70.9 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 57/174 (32%), Gaps = 10/174 (5%) Query: 12 LIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVPW 67 L A K + +V + + + A+ K N+++ P V+G +S+ L + + Sbjct: 34 LAATTAANTSNKYSASFREVEIKEFVATAAQVLKKNIIIDPSVTGQISVRSYDDLDETQY 93 Query: 68 KQALQTVVKSAGLITRQEGN-ILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 V+++ G Q N L++ +A R + + R + Sbjct: 94 FVFFLNVMETYGYSVVQIDNHTLNIVPLA----QSLRAAWTEGNTGREKNIVVRLAKMDA 149 Query: 127 ADAGELAKAGEKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 EL ++ + N + + + L V Q+D Sbjct: 150 LPGSELEPILSRISEDVAVKLKYYSPGNLFIFTGREDVVKRLVDIVNQVDNARK 203 Score = 41.3 bits (96), Expect = 0.070, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 27/67 (40%), Gaps = 7/67 (10%) Query: 121 SITLQYADAGELAKAGEKLLS-------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQ 173 + A A ++AK+ + + + T ++++ + + + + ++ Sbjct: 209 VFNVSRAKASDIAKSLQSAFKNLSPEDKDAPLIYGNDATRTIVVKGSAHVKTEIRRLIST 268 Query: 174 MDLPVGQ 180 MD+P Q Sbjct: 269 MDVPDQQ 275 >UniRef50_A8ZWZ5 General secretion pathway protein D n=2 Tax=Desulfobacteraceae RepID=A8ZWZ5_DESOH Length = 799 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 80/372 (21%), Positives = 152/372 (40%), Gaps = 41/372 (11%) Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE-- 137 L+ N++ + + + I + + L+ ADA ELAK + Sbjct: 289 LVADDRANVVIMLASESETVKIRKLITLLDKKVQQGKERIHVYYLKNADAEELAKVLQML 348 Query: 138 ---------------KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE 182 +LS ++T D TN L++ + L++ + ++D+P V Sbjct: 349 PEKQGDATAEGKKLAPVLSKAINITADASTNSLIIMAERDDYLVLKEIIEKLDIPRSMVY 408 Query: 183 LSAHIVTINEKSLRELGVKWTLADAQH----------AGGVGQVTTLGSDLSVATATTHV 232 + I +N ELG +W + G G T + +A Sbjct: 409 IECLIAEVNINKDFELGAEWLVGGKGSYDDKDGGYAVGFGGGSDTGYANVARMAMGGLPS 468 Query: 233 GFNIGRINGR---------LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 GF++G + L + A ++ + + I+++P+++ + Q A+I G IPY Sbjct: 469 GFSVGAMAESIVVGGIEYPNLAAVVRAFKKDKDVQILSTPQIMTTDNQEATITVGKNIPY 528 Query: 284 QV----SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL 339 +S E ++ E+K+ + +++ P + + IRL + Q+ + Sbjct: 529 LTKIGTTSSEETYSNYEYKDVGISLKIKPQINENRLIRLDIEQELTKLDQLTTVSLDR-P 587 Query: 340 AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRE 399 A K+ I T V V T+ +GG+ + VP LGDIP+ G LF+ + E+ Sbjct: 588 ATLKRGITTNVIVHDEHTIVIGGLIDDSMSRVEYKVPCLGDIPFLGWLFKGLSRSSEKTN 647 Query: 400 LVVFITPRLVSS 411 L+VF+TP ++ + Sbjct: 648 LLVFLTPHVIKT 659 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 6/177 (3%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS-LHLTDVPWKQA- 70 +P V++ +DV +A ++ ++E N V+ +V V+ + + +P ++A Sbjct: 71 LPTAADDGENLVSVDFNDVDLAVFIKFISEVTGKNFVLDQNVRTKVTVISPSKIPVEEAY 130 Query: 71 --LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 ++V++ G T + G+I+ V + + + L + I L+YAD Sbjct: 131 RVFESVLEVYGFATVEAGDIIKVVKAGDARSKSIETGLVKEGRAPDDKLVTQIIPLRYAD 190 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP--VGQVEL 183 A E+ L+S + TN L+L D + + L + + +D+ QV + Sbjct: 191 ANEIKGLFTPLVSKDSVLLAYPSTNMLILTDAYSNIQRLMRILDAIDVTGIGRQVSV 247 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 17/103 (16%) Query: 95 AWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL-------------- 140 +N A + + I L+YADA ++ E + Sbjct: 221 DAYSNIQRLMRILDAIDVTGIGRQVSVIPLEYADASKMVSILEVVFREAVDRGGPPQRGG 280 Query: 141 ---SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 + K + D R N +++ +++ + + + +D V Q Sbjct: 281 TEPTDKIRLVADDRANVVIMLASESETVKIRKLITLLDKKVQQ 323 >UniRef50_B3R7X2 General Secretory Pathway protein D, type II secretion system n=16 Tax=cellular organisms RepID=B3R7X2_CUPTR Length = 831 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 114/300 (38%), Gaps = 35/300 (11%) Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 + D TN L++ ++ L + +D QV + + IV + ELG++W Sbjct: 411 IQADPSTNSLIITASEPVYRNLRGVIDDLDARRAQVYIESMIVEVTATQASELGIQWQGL 470 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHV-------------------------GFNIGRIN 240 + +G G N+G +N Sbjct: 471 ISSSSGNNNVFAGTNFGTGGQNILNLTLAGALADSNRSAGIVAAQQLVPDIGGLNLGIVN 530 Query: 241 -GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA------- 292 L L AL ++++++P L+ + A I G IP S Sbjct: 531 RAMGLGALLRALGTNGSVNLLSTPNLITLENEEAKILIGQNIPITTGSYAQTGGAASVTP 590 Query: 293 -TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 + + K+ + + V P + G +++++ + Q + + + IET V Sbjct: 591 FQTFDRKDVGITLRVKPQITDGGLVKMQIFQESSNVVQA-TANLIQGPTTNVRSIETNVL 649 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 V G+ + LGG+ G VPLLGDIPW G LFR++ K + L+VF+ P ++ + Sbjct: 650 VDDGQIIVLGGLIEDNYGDGVQKVPLLGDIPWIGGLFRYENKNRSKTNLLVFLRPYVMRT 709 Score = 124 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 62/172 (36%), Gaps = 5/172 (2%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDV 65 P V A +V L + + V++A+ + N V+ P V GTV+L ++ Sbjct: 49 PPAPPDVTPANRDQVVLNFVNADLDSVIKAVGQATGKNFVIDPRVKGTVNLVTEQPVSRA 108 Query: 66 PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQ 125 Q L +V++ G + V A + + + L Sbjct: 109 QALQTLGSVLRMQGYAMVESNGFTKVVPEADAKLQGSPTVIG-GSPSRGDQVVTQVFRLN 167 Query: 126 YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 Y A L +++ ++T N L++ D L + + +A +D P Sbjct: 168 YESANNLVPVLRPMIAPNNTITAYPANNTLVITDYADNLRRIARIIAAVDAP 219 >UniRef50_A1WZA7 Type II and III secretion system protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZA7_HALHL Length = 372 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 167/306 (54%), Gaps = 19/306 (6%) Query: 120 RSITLQYADAGELAKAGE---KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 R++ L +A+A +LA+ +LS G +VD+RTN L+L+D L EQ V ++D Sbjct: 44 RTLPLVHAEAAQLAELLRDETGVLSESGHASVDERTNTLILQDTPARLEEAEQLVRELDR 103 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSD-----------LSV 225 QV + A IV + + RELG + L+ + G + GS+ L Sbjct: 104 ANRQVMIEARIVLASGEYSRELGSRLGLSSERGDGHFAFDSLPGSNDAAVGDGLLAELPP 163 Query: 226 ATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 + ++G + RLL LELSA+E + +++SPR+L + Q A I+QG +IPYQ Sbjct: 164 VGEGARLSVSVGEVGERLLQLELSAMEAEGHGRVVSSPRVLTTERQAARIEQGVQIPYQ- 222 Query: 286 SSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQE 345 + ESGAT+V F++A L + TP V + + L L ++++ GQ+ + V +ID Q Sbjct: 223 ETAESGATAVAFQDAALSLTATPQVTEDDAVSLALRVTKDAVGQIYE----GVPSIDTQA 278 Query: 346 IETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFIT 405 + T + V++GET+ LGG+ + + + VP LG++P G LFR E EL+VF+T Sbjct: 279 VTTHLRVQAGETIVLGGVREHEQRKQRQRVPWLGELPLIGWLFRQRMSEQSHHELLVFVT 338 Query: 406 PRLVSS 411 PRLV Sbjct: 339 PRLVED 344 >UniRef50_C5S7Y5 General secretion pathway protein D n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7Y5_CHRVI Length = 733 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 77/361 (21%), Positives = 145/361 (40%), Gaps = 14/361 (3%) Query: 61 HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR 120 + + + + G G+ S+ + R + + Sbjct: 357 RVKHSDAESLADILSQLFG----GTGSNARKSSVGNVAPGLGRSSSIGGTTTTTTSGNSD 412 Query: 121 SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ 180 S T Q + A + E +S+ ++ D N LL+R + + + Q+D+ Q Sbjct: 413 SKTSQSQTTRQSASSHELEMSSSVNIVADAVNNSLLVRASPRDYKKILDALKQLDILPLQ 472 Query: 181 VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQV--TTLGSDLSVATATTHVGFNIGR 238 V + A IV I + GV+W L G T + T GFN Sbjct: 473 VLVEATIVEITLSGSLKYGVQWELFGPGADGKSFASLDGTFDDAETSGIGTMFPGFNWAM 532 Query: 239 INGRL-LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATS--- 294 ++ + LSAL L++++SP ++ Q A I+ G E+P S + +T+ Sbjct: 533 VSNPDTIKATLSALAGDNLLNVLSSPSVMVMDNQTAKIQVGREVPIATSKQDGTSTTDRT 592 Query: 295 ---VEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVE 351 + +K+ + + V P V G ++L++ + + + + K+ I + V Sbjct: 593 YTTISYKDTGVILTVKPRVTPGGLVQLEIEQEVSTVFE-ENASGLNSPSFKKRTITSSVA 651 Query: 352 VKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 V+S + + LGG+ G+ +P L +P G LF K R ELVV +TP+++++ Sbjct: 652 VRSNQAVVLGGLIEDTRSDGKQGIPGLYSLPVVGGLFGETSKSSTRTELVVVLTPKVIAN 711 Query: 412 E 412 + Sbjct: 712 D 712 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 62/169 (36%), Gaps = 5/169 (2%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLH----LTDVPW 67 P A P VTL D + +V++ L + K+N V+ P V G SL L Sbjct: 100 APSEVDASPGDVTLNFDGTDIREVVKVILGDLLKVNYVLHPAVQGATSLQTGRPLRREDL 159 Query: 68 KQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYA 127 L+T+++ Q+G+ V +A + + + + L+Y Sbjct: 160 LPTLETLLRMNNAALVQKGDRYEVVPLANAVQGRVTPQLGETDRALPNGYSVQVVPLRYI 219 Query: 128 DAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 A E+ L + VD N L++ +S L + D+ Sbjct: 220 GAEEMNSILTPLAPEGSVIRVDNLRNLLVIAGTSPEMSNLLDTIRVFDV 268 >UniRef50_A8URL9 Putative type II secretion system protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URL9_9AQUI Length = 518 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 95/460 (20%), Positives = 179/460 (38%), Gaps = 61/460 (13%) Query: 8 LLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSP--DVSGTVSLHLTDV 65 +L + + + ++ P+ +VL A+A+ LNL+VSP DV+ T++ +V Sbjct: 61 ILAPTYREIDPFEGKTFSMSAVSAPLTKVLYAIADGSGLNLIVSPEVDVNRTITATFNNV 120 Query: 66 PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNN------------------------- 100 P K+AL+ ++ GL GN+L V + Sbjct: 121 PMKEALEIIMDMTGLYYEVRGNVLYVKEFMTKTFRIPYIHTTTNFNSSLGGDVLGGALTS 180 Query: 101 ------IARQEAEQARAQANLPLENRSITLQYADA-------GELAKAGEKLLSAKGSMT 147 + TL Y + +L + + +LS +G Sbjct: 181 GGTYGTATTGVTAGTTGGIGATGLRGNFTLDYKNPEGANDLYKQLEENVKNMLSKEGKFV 240 Query: 148 VDKRTNRLLLRDNKTALSALEQWVAQMDLPV-GQVELSAHIVTINEKSLRELGVKWTLAD 206 +++ T L++ D + + +E++V + QV + A IV I + + G+ W+ Sbjct: 241 LNRFTGTLVVTDRRRNVERIERFVKGFVRKIGKQVLIEAKIVEIALSDVFQYGIDWSTFF 300 Query: 207 AQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLL 266 G T LS + GF + ++AL ++ +++PR++ Sbjct: 301 RDVFG-----TGANVTLSQTLSIPTGGFFSLNVVSSDFSTLVNALATYGKVYTLSNPRIM 355 Query: 267 ASHLQPASIKQGSEIPYQVSSGESGAT--------SVEFKEA--VLGMEVTPTVLQKGRI 316 S+ Q A I G P+ + ++ + + VTP + G I Sbjct: 356 VSNGQTALIATGIVTPFFERQAVTITGTTTTQIQENIVKTNVLEGVLLGVTPYIDDNGSI 415 Query: 317 RLKLHI-----SQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSG 371 + + + +V Q E ++ +E T V V++GE + +GG+ Sbjct: 416 VMNIIPVATRLEGSKTLEVNGQVLAEAPILNIKETGTIVRVRNGELVVIGGLIGDVRSVQ 475 Query: 372 QDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + VP LGDIP G LF+ E+REL++F+ PR++ + Sbjct: 476 ERKVPGLGDIPVLGYLFKSKRTVKEKRELIIFLRPRIIDN 515 >UniRef50_A0YA35 Type II secretory pathway, component PulD n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YA35_9GAMM Length = 558 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 82/458 (17%), Positives = 164/458 (35%), Gaps = 60/458 (13%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 I AA + + V++V L + + N+VV P V G +SL L +V + + Sbjct: 68 IAESDAAAEDRFDVAVNEVSAKSFFMGLVKGTEFNMVVHPGVEGAISLDLQNVTISEVMG 127 Query: 73 TVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN------------- 119 V + G +++GN+ + ++ RA + Sbjct: 128 IVNEVYGYPYKKQGNLYQILPGGLRSEIFQIDYLSLKRAGTSETQVTSGEVSSAKGSREQ 187 Query: 120 ------------------------RSITLQYADA-GELAKAGEKLLS--AKGSMTVDKRT 152 R IT AD GE+ + + L+ + V + Sbjct: 188 SSNSSSESNNQRAGNRQGGGSVGARIITETDADFWGEIQQTLKVLVGTEEGRRVIVTPQA 247 Query: 153 NRLLLRDNKTALSALEQWVAQMDL-PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAG 211 +++R + A +++ + ++ QV L A I+ + + G++W G Sbjct: 248 GIIIVRAMPAEIDAAREFLNRAEVIMRRQVVLEAKILEVELNDGYQTGIQWESMGGTLNG 307 Query: 212 GVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQ 271 GS + + F+ + + LE + + +++SPR+ + Q Sbjct: 308 NTLDFGVSGSSPVSSNSVGG-AFSAVYESVGDFSGVIELLETQGSVQVLSSPRISTVNNQ 366 Query: 272 PASIKQGSEIPYQVSSGESG---------ATSVEFKEA--VLGMEVTPTVLQKGRIRLKL 320 A IK G++ + S +E + ++VTP + I L + Sbjct: 367 KAVIKVGTDEFFVTEISNSTTTSTGATTSNPEIELTPFFSGIALDVTPQISDNDEIILHI 426 Query: 321 HISQNVPGQVLQQADGEVLAI-------DKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 H S + + + +E ++ V +SG+ + LGG+ K+ Sbjct: 427 HPSISEVRDQTKVITLGDQTVEVPLALSTIRETDSIVYARSGQVVVLGGLMQTKSVDNNS 486 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 P+LG++P G LF + + ELV+ + P ++ Sbjct: 487 GTPVLGNLPGVGHLFSQQRNKTVKNELVILLRPVIMGP 524 >UniRef50_Q1N2G1 Type II secretory pathway, component PulD n=1 Tax=Bermanella marisrubri RepID=Q1N2G1_9GAMM Length = 524 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 84/441 (19%), Positives = 171/441 (38%), Gaps = 51/441 (11%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + ++ ++ D V + +L E ++N+VV P V ++SL L+DV + L+ V G Sbjct: 58 QRERFDVVADKVNAQEFFASLVEGTEINMVVHPKVRASISLRLSDVTLLETLKAVRDQYG 117 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL-PLENRSITLQYADAGELAKAGEK 138 L R+ + QN R ++ + + IT + A + Sbjct: 118 LQFRKTEYGYRILPRDLQNQVFPVNYLNVTRTGSSGLTVSSGQITSKNTSADNVNSTTAS 177 Query: 139 LLS----------------------------AKGSMTVDKRTNRLLLRDNKTALSALEQW 170 LS + VD + + +++R +SA+EQ+ Sbjct: 178 QLSTASKIQTTASSDFWQTLKTSITTLVGSSEGRKVIVDSQASLVVVRAFPNEISAVEQF 237 Query: 171 VAQMDLPV-GQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATAT 229 + + L + QV + A I+ + + G++W D + G + T S ++ Sbjct: 238 LDKAQLSLNKQVIIEAKILEVTLNDGYQAGIQW---DGLASSGSTEFTPSLSATTLRNPD 294 Query: 230 THVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE 289 G G + L+++ ++ +++SPR+ + Q A IK G++ + Sbjct: 295 DIDGIFSLAFTGSDFTGVIQLLKRQGKVQVLSSPRISTVNNQKAVIKVGTDEFFVTDVSN 354 Query: 290 SGA---------TSVEFKEA--VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV 338 V + ++VTP + + + L +H S + + + Sbjct: 355 DTTTTTTTTSTNPEVTLTPFFSGIALDVTPQISENNDVILHVHPSVTEVVERNKVIELGD 414 Query: 339 LAID-------KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHD 391 + +E ++ + ++G+ + +GG+ K SVP L IP G LFR Sbjct: 415 DIFNLPLAVSSIRETDSIIRARNGQVVVIGGLLQDKQSRTDASVPWLARIPILGALFRQS 474 Query: 392 GKEDERRELVVFITPRLVSSE 412 +E + ELV+ + P++V + Sbjct: 475 DQESTKSELVILLQPKVVDED 495 >UniRef50_D0SDL7 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDL7_ACIJO Length = 785 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 29/303 (9%) Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 195 S S+ D N L+++ + + +E + Q+D QV + A I+ + Sbjct: 340 ITSFNSNGVSIIADSSQNALVVKADPQLMREIESAIQQLDTRRQQVLIEATILEVEGNDA 399 Query: 196 RELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNI------------------- 236 +LGV+W + D G+ +GS L A G Sbjct: 400 DQLGVQWAMGDLSSGVGIINFDNIGSSLKSIAANYLTGGGAGAASAIGAGGSLILGDYKE 459 Query: 237 -GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA--- 292 + +L + AL+ + +++++P ++ + A I G +P+ S + + Sbjct: 460 GSDGSRQLYGAMIQALKSNTKSNLLSTPSIVTMDNEEAYIVVGENVPFVTGSVSTTSSGT 519 Query: 293 ----TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 T++E K+ + ++V P + + G IRL++ + QA V K+ I+T Sbjct: 520 ANPYTTIERKDVGVTLKVVPHIGEGGTIRLEIEQEVSDVKANKGQAQDLV--TSKRAIKT 577 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 V + G T+ LGG+ + + S+P LG IP G+LFR DGK D++R L+VFI P + Sbjct: 578 SVLAEHGNTIVLGGLISDNTSYSRQSIPGLGAIPGLGRLFRSDGKSDQKRNLLVFIHPTI 637 Query: 409 VSS 411 V Sbjct: 638 VGD 640 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 6/177 (3%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-- 60 + +L A+ Q + + D + + +A+ N V P V G V++ Sbjct: 10 WALTIAAPLLAMVSTASYAQTWKINLRDADLTAFINEVADITGKNFAVDPRVRGNVTVIS 69 Query: 61 --HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 L V+ G++ G + + + ++ + + Sbjct: 70 NKALNKQEVYDLFLGVLNVNGVVAIPSGRTIKIVPDSNVKSSGIPYDVRHRAT--GDQVV 127 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 R I L+ +A +L A L+ ++ TN L++ D + + LE + +D Sbjct: 128 TRVIWLENTNANDLIPALRPLMPQFAHLSAVNGTNALIVSDRASNIYQLETIIRNLD 184 >UniRef50_Q1N1M8 Type II secretory pathway, component PulD n=1 Tax=Bermanella marisrubri RepID=Q1N1M8_9GAMM Length = 640 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 72/349 (20%), Positives = 143/349 (40%), Gaps = 31/349 (8%) Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA-------- 142 + ++ + + I LQ+AD+ ELA+ + L+ Sbjct: 252 IIQGEQSARERVKELIATLDRPSKFSGKASVIRLQHADSEELAELLKNLMGDVKDDKGKS 311 Query: 143 ----KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 S+ D N L++R + +S +++ V ++D+ QV + A IV + + + Sbjct: 312 QAGGSVSIHADTGLNALVVRAEPSVMSEIKEIVTELDVRRAQVLIEAAIVEVTGQVDDRV 371 Query: 199 GVKWTLAD----------AQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRL---LD 245 GV+ D A ++ L + ++ G +G + Sbjct: 372 GVQTAALDQETGETPLVATDFANAGTSISQLITGIATGQPAISSGLTLGGVGQNGDTEFA 431 Query: 246 LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGES-----GATSVEFKEA 300 + ALE +++++P ++ A I G +P+ S S T+++ ++ Sbjct: 432 FLVQALESVSNANLLSTPSIMTMDNHEAEIIVGQNVPFVTGSTSSTSNSNPFTTIKREDI 491 Query: 301 VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL 360 ++VTP V +RL + S + ++ +K+ I+TQ+ ++GE + L Sbjct: 492 GTTLKVTPHVQDGKFVRLSVEQSTESVAPTAVEGQADL-ITNKRSIQTQILAENGEIVML 550 Query: 361 GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 GG+ + + VP LGDIP G LFR + ++ L+VF+ P +V Sbjct: 551 GGLIRDAVQESESKVPFLGDIPIIGWLFRSTSESRVKQNLIVFLKPTVV 599 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 70/177 (39%), Gaps = 7/177 (3%) Query: 4 WIAALLLMLIP-GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-- 60 ALLL+ +P AA + + + D + + +A + V+ P V G V++ Sbjct: 18 LAIALLLLSMPFQALAADDETWKVNLKDADIKAFITQVANITGYSFVIDPRVKGKVTIVS 77 Query: 61 --HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 +T + Q+V+ G G+I+ + A + + Sbjct: 78 DTPMTQNEVYEMFQSVLAVHGFSAIPAGHIIKIVQQNDTKQEGG--MPTTVNAPQSEQMI 135 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + I ++ A +L +++ G + K N L++ D+ + + LE+ + ++D Sbjct: 136 TQVIQIKDTPALDLVPILRPMVAKYGHLAGVKSANALIVTDHASNVRRLEKIIQRLD 192 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 23/140 (16%) Query: 60 LHLTDVPWKQALQT----VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL 115 + + D P + V K L + N L V +N+ R E R + Sbjct: 139 IQIKDTPALDLVPILRPMVAKYGHLAGVKSANALIV---TDHASNVRRLEKIIQRLDGSG 195 Query: 116 PLENRSITLQYADAGELAKAGEKL----------------LSAKGSMTVDKRTNRLLLRD 159 E + L+ A G++ L ++ + + D+R NRL+++ Sbjct: 196 VSELEVVQLEEAWVGDIVDILTNLDPDKVSEGGKAREASGVAGRIRVVADERANRLIIQG 255 Query: 160 NKTALSALEQWVAQMDLPVG 179 ++A +++ +A +D P Sbjct: 256 EQSARERVKELIATLDRPSK 275 >UniRef50_A4BES0 Type II secretory pathway, component PulD n=1 Tax=Reinekea blandensis MED297 RepID=A4BES0_9GAMM Length = 653 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 141/362 (38%), Gaps = 42/362 (11%) Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA-------- 142 + + + ++ + + I L ADA ++A+ + + S Sbjct: 242 IVKGETEARQQIIELIQKLDTPSQENASYKVIFLNNADAVKMAEILKGIASTSQGASGQN 301 Query: 143 -----KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 S+ D+ N L++R + + LE ++Q+D+P QV + A IV + Sbjct: 302 EPPSQPISVLADEEQNALIVRAEPSDMKELESIISQLDIPREQVLIEAAIVEVTGNDTDT 361 Query: 198 LGVKW--------------------------TLADAQHAGGVGQVTTLGSDLSVATATTH 231 LGV+W LA + G + L+ A T Sbjct: 362 LGVQWATNPEVVQDGVPFLSVSSEVAGASVGNLAQSVGQGISQAGGSPLGALTSVPAGTF 421 Query: 232 VGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 +G N + + ALE + +++P +L A I G+ +P++ Sbjct: 422 MGLADPFGNRVDFGVAIQALESASNTNFLSTPSILTLDNSEAVITVGNSVPFKTGGSGDE 481 Query: 292 AT--SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 ++E ++ + V P + Q G IRL++ + + +V K+++ TQ Sbjct: 482 DNPFTIERQDVGTTLTVIPHIQQNGTIRLEVDQIVESVDETVSYDASDV-VTKKRQVTTQ 540 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V V SGET+ LGG+ + + VP+LG IP G LF+ + L++ + P ++ Sbjct: 541 VLVNSGETIVLGGLIQDQVSELESRVPVLGYIPIIGHLFKSKSTLKTKTNLLIILKPSVI 600 Query: 410 SS 411 Sbjct: 601 ED 602 Score = 105 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 7/189 (3%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 + I A L+L A Q TL + + + +V+ +A+ ++ P V G V++ Sbjct: 7 FRNVILACCLLLTTVSVFADDQTYTLNMQEADITEVIDLVAKVTGRTFIIDPRVRGKVTV 66 Query: 61 ----HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 +T + ++ G Q G++ + + + E + R Sbjct: 67 ISDKEMTKSQIYETFLATLEVYGFSAVQAGDVTKIIGQSDIKSAGIEVETQGGRV--GEE 124 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + R +Q A A EL +++ G + N L++ D T + L + V +D Sbjct: 125 IITRVFPIQNASAMELVPILRPMVANYGHLAGVPSANVLIVADRATNIDRLSEIVYLLDK 184 Query: 177 PVGQVELSA 185 + E+ Sbjct: 185 AGSE-EIEV 192 >UniRef50_A8A4B9 General secretion pathway protein D n=30 Tax=Escherichia RepID=A8A4B9_ECOHS Length = 686 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 66/377 (17%), Positives = 137/377 (36%), Gaps = 59/377 (15%) Query: 90 SVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS-------- 141 + S + R+ + ++ ++ L+Y+ A +L +++ Sbjct: 255 VIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEE 314 Query: 142 ---------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 S+ K +N L++ + + +L+ + Q+D+ QV + A IV + E Sbjct: 315 AEGTVGSGREIVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAE 374 Query: 193 KSLRELGVKWTLADAQ---------------------------------HAGGVGQVTTL 219 S GV+W DA + T Sbjct: 375 GSNINFGVQWASKDAGLMQFANGTQIPIGTLGAAISQAKPQKGSTVISENGATTINPDTN 434 Query: 220 GSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 G ++A + + + A++ +++++P + Q A G Sbjct: 435 GDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSITTLDNQEAFFMVGQ 494 Query: 280 EIPYQVSS-----GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 ++P S + +VE K+ + ++VTP + + +++ + + Sbjct: 495 DVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEGQTSLD 554 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 +++++T V GE + LGG+ + VPLLGDIP G LF+ + Sbjct: 555 V----VFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADK 610 Query: 395 DERRELVVFITPRLVSS 411 E+R L+VFI P ++ Sbjct: 611 KEKRNLMVFIRPTILRD 627 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 7/164 (4%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTV 74 A+ T D + ++ + +++ P V G VS+ L + + Q + Sbjct: 40 AEEATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNL 99 Query: 75 VKSAGLITRQEGN-ILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 +++ G N +L V + E + A + + + ++ ELA Sbjct: 100 LEAQGYAVVPMENDVLKVVKSSAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELA 159 Query: 134 KAGEKLLSAKGS--MTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 +++ + GS + +N ++L + + L + + +D Sbjct: 160 PILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQSVD 203 Score = 63.2 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 15/151 (9%) Query: 37 LQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ---ALQTVVKSAGLITRQEGNILSVHS 93 L + E N V+ V + +V ++ L+ ++ SAG + +V Sbjct: 128 LPLVGEGSD-NYAGDEMVTKVV--PVRNVSVRELAPILRQMIDSAGSGNVVNYDPSNVIM 184 Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG--------- 144 + + + + R I L A A E+A+ E L G Sbjct: 185 LTGRASVVERLTEVIQSVDHAGNRTEEVIPLDNASASEIARVLESLTKNSGENQPATLKS 244 Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + D+RTN +++ + + + + ++D Sbjct: 245 QIVADERTNSVIVSGDPATRDKMRRLIRRLD 275 >UniRef50_Q47VE8 MSHA biogenesis protein MshL n=19 Tax=Gammaproteobacteria RepID=Q47VE8_COLP3 Length = 609 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 85/464 (18%), Positives = 176/464 (37%), Gaps = 71/464 (15%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 +++ + +V QA+ + N+V+ PDV+G +SL L +V +AL V G Sbjct: 82 AEKRLEVSATEVDAKDFFQAIVRGSRYNVVIHPDVTGQISLSLNNVTLSEALTVVEDVYG 141 Query: 80 LITRQEGNILS-----VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQ--------- 125 + GN++ + + N + + + N + + Sbjct: 142 YEIIRRGNVVKVFPPGIRTETIALNYLFLKRFGSSSTTINSGGVSENDPNSGNSSNGNSS 201 Query: 126 ----------------------------YADAG-----ELAKAGEKLLS--AKGSMTVDK 150 Y + EL ++ + S+ V Sbjct: 202 NSNNSNSGSNNNQSGNNGSSNQNSGINLYTENESNFWDELKESLTAFVGTGEGRSVIVSP 261 Query: 151 RTNRLLLRDNKTALSALEQWVAQMDL-PVGQVELSAHIVTINEKSLRELGVKWTLADAQH 209 + + +R L+A+++++ + QV + A I+ + + G+KW Q Sbjct: 262 QAGLVTVRALPQELTAVKKFITATESHLHRQVIIEAKIMEVTLNDDFQQGIKWNKVLDQV 321 Query: 210 AGGVGQVTTLGSDLSVATATTHVGFNIGRIN----GRLLDLELSALEQKQQLDIIASPRL 265 +T G+ + + T G N + G + L+ + + +++SPR+ Sbjct: 322 GSADIIYSTTGNVVGNVISNTIGGVNSINFSKQTSGSDFSGVIELLQTQGNVQVLSSPRI 381 Query: 266 LASHLQPASIKQGSEIPYQVS--------SGESGATSVEFKEA--VLGMEVTPTVLQKGR 315 A++ Q A IK G + + + + VE + ++VTP + + G Sbjct: 382 TATNNQKAVIKVGEDEYFVTEVSSTTTTGTSTTTTPEVELTPFFSGIALDVTPQISKDGS 441 Query: 316 IRLKLHISQN-----VPGQVLQQADGEVL--AIDKQEIETQVEVKSGETLALGGIFTRKN 368 + L +H S + + +E +T + SGE + +GG+ N Sbjct: 442 VILHVHPSVTITEEQSKTIKIGDTTLVLPLAQSSVRESDTIIRANSGEVVVIGGLIETYN 501 Query: 369 KSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + P+LGDIP+ G+LF++ ++ ++RELV+ + P +V + Sbjct: 502 IDIESKTPILGDIPYLGELFKNKSQKSQKRELVIMLKPIVVGQD 545 >UniRef50_Q0VSG7 General (Type II) secretion pathway protein D n=2 Tax=Alcanivorax RepID=Q0VSG7_ALCBS Length = 710 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 68/363 (18%), Positives = 138/363 (38%), Gaps = 44/363 (12%) Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA-------- 142 + Q + + I L + DA +A+ + + Sbjct: 256 IIKGDRVTRQRMLQMVRSLDTEETNNSGAKVIRLSHGDAKSMAELLKNFVDGASVNRAGG 315 Query: 143 ------------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 + S+ D+ N L++R + ++ ++++D+ Q+ + A IV I Sbjct: 316 DGKTTSVALNNNEVSIQADESLNALVVRAKPAMMKQIQSVISKLDVRRAQILIEAAIVEI 375 Query: 191 NEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLS----VATATTHVGFNIGRINGRLLD- 245 + + + LG ++ + G G ++ + G ++G L Sbjct: 376 SGEQGKNLGFQYVGGSNEDGVGAVNFGGNGLSVNSVVQALASDDPSGLSLGDGITAGLGE 435 Query: 246 ----------LELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA--- 292 + AL ++++++P +L + ASI G +P+ + Sbjct: 436 TDSDGDLKWGALIQALSTSSDVNLLSTPSILTLDNEEASIIVGENVPFVTGQSTNTGSGV 495 Query: 293 ----TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIET 348 T+++ ++ L ++VTP V IRL+L + A V +++++ Sbjct: 496 SNPFTTIQREDVGLTLKVTPHVAGLSTIRLELEQESSAVKDSAGDAVDIV--TTTRKLQS 553 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 V ET+ALGG+ + VP LGDIP G LFR K+ + L+VF+ P + Sbjct: 554 TVLADDAETIALGGLIKDDIRVTVRKVPFLGDIPVLGFLFRSTSKDRVKSNLMVFLKPTI 613 Query: 409 VSS 411 + + Sbjct: 614 LGN 616 Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 60/170 (35%), Gaps = 10/170 (5%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT-VSL----HLTDVPWKQALQTVV 75 + T+ + + + + +A+ N VV P V V++ LT + +V+ Sbjct: 44 GESWTVNIRNADIQAFISQVAQMTGKNFVVDPRVRARDVTVVSTKSLTSNEVYELFLSVL 103 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 + G G+I + + + + + L R I ++ EL Sbjct: 104 QVHGYAAVSVGDITKIVPNTTAKQSNLPLVEKG--SSSGEELVTRVIAVESTPVEELVPV 161 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG---QVE 182 L+ G + N L++ D+ + +E ++ +D QV Sbjct: 162 LRPLVPQYGHLAAVGSANALIISDHLDNIRRMEAIISSLDSAESEDVQVL 211 Score = 41.7 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 12/129 (9%) Query: 60 LHLTDVPWKQALQTVV-KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 + + P ++ + + + I+ +NI R EA + + + Sbjct: 148 IAVESTPVEELVPVLRPLVPQYGHLAAVGSANALIISDHLDNIRRMEAIISSLDSAESED 207 Query: 119 NRSITLQYADAGELAKAGEKLLS-----------AKGSMTVDKRTNRLLLRDNKTALSAL 167 + + L++A AG++ K E L + D+RTNRL+++ ++ + Sbjct: 208 VQVLKLKHAFAGDMVKMLESLTPQTGGRGGKSAEGGVIVVADERTNRLIIKGDRVTRQRM 267 Query: 168 EQWVAQMDL 176 Q V +D Sbjct: 268 LQMVRSLDT 276 >UniRef50_B9JMF5 General secretion pathway protein D n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMF5_AGRRK Length = 714 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 127/278 (45%), Gaps = 15/278 (5%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S S+ D N LL+ + +EQ + Q+D+ QV + A I + + G+ Sbjct: 405 STHTSVVADVENNALLISTTQREYEHIEQILKQLDVMPTQVLIEAVIAEVTLNDQLKFGL 464 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDII 260 +W + + G+ ++ +T + GF + L+AL ++I+ Sbjct: 465 RWFFENGKFGVGLSDLS------DGSTGASFPGFAW-TFASSNVGATLNALSSITNVNIV 517 Query: 261 ASPRLLASHLQPASIKQGSEIPYQVSSGESGATS-------VEFKEAVLGMEVTPTVLQK 313 ++P L+A + Q A+++ G ++P S +S ++ K+ + + V P V Sbjct: 518 SAPTLMALNNQKATLQVGDQVPIVTQQSASTTSSNTAIVSSIDLKDTGVILTVLPRVNSS 577 Query: 314 GRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 GR+ L + + + + + I ++++ T+V V E++ALGG+ + N Sbjct: 578 GRVMLDIQQEVSNVVKTTT-SGIDSPTIQQRKLSTKVIVDDNESVALGGLIQQSNTLNHS 636 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VP+LG +P FG F++ + EL++FI PR+V Sbjct: 637 QVPILGKMPIFGNAFKNKEDTINKTELIIFIKPRIVRD 674 Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 66/161 (40%), Gaps = 6/161 (3%) Query: 21 PQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTVV 75 + TL + D P++ + L + K++ VV P V+G V+L ++ L++ + Sbjct: 90 GEGYTLNLVDAPISAAAKSILGDILKVSYVVDPRVNGKVTLQTSQPVSRDALVDILESAL 149 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 G ++G+ + I + + + + + + I L++ A E+ Sbjct: 150 AVNGAAIVRKGDSYQIVPIGN-SFSTTPAVTVPSATPSGPGVRVQVIELRFIGAEEMKSI 208 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 E + + D N L+L + LSA+ +A D+ Sbjct: 209 LEPISRPGSILRADTARNLLMLAGSNADLSAMRDAIATFDV 249 >UniRef50_A4BG93 Type II secretory pathway, component PulD n=1 Tax=Reinekea blandensis MED297 RepID=A4BG93_9GAMM Length = 519 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 68/439 (15%), Positives = 157/439 (35%), Gaps = 38/439 (8%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 +L + + + P AQ L E ++LN++V P ++ T++L L +V Q Sbjct: 66 LLSLTQAPTAQVRFDVEARNRPAAQFFADLGEAQQLNILVDPGINNTITLSLRNVTLNQV 125 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQA--------NLPLENRSI 122 L + G ++ V R+ + + Sbjct: 126 LSALRDIYGYDFQRTDYGYRVTPNQLSTRVYRLNYLNLERSGSAKTTVGGDDSNTVTTEF 185 Query: 123 TLQYADA----GELAKAGEKLLSAK----GSMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 + A + ++ ++ + + ++ +T +++ +A+ +++A Sbjct: 186 SASSGAANGFWSGIEQSIRGFIAERDGGPSPVVMNTQTGLVVVHATNREHTAIARFLADA 245 Query: 175 D-LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVG 233 + + QV + A IV + G+ W+ + G +++ A G Sbjct: 246 ELIMQKQVIIEAKIVEVTLDQEYRSGINWSFFNDNFGSGNNSAGIGLDGNAISGAGGVGG 305 Query: 234 FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT 293 ++ L L+ + + +++SPR+ + Q A IK G++ + + Sbjct: 306 VFNLSLSLDNFTSMLQLLDHQGDVQVLSSPRVSTINNQKAVIKVGTDEFFATIQSITTEV 365 Query: 294 ------SVEFKEA--------VLGMEVTPTVLQKGRIRLKLHISQNVP--GQVLQQADGE 337 SV A + ++VTP + + L + + G Sbjct: 366 NDDDSDSVTTVPAFELEQFFSGIALDVTPQIADDDSVTLHVRPTVTEVVEDTKTLDVGGR 425 Query: 338 VLAI-----DKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 + + +E ++ + +SG+ + +GG+ +K G +P IP LF D Sbjct: 426 SYQLPLAYSNIRESDSIIRAQSGQIVVIGGLLQQKQDLGTTGLPWFQTIPVIRGLFAQDR 485 Query: 393 KEDERRELVVFITPRLVSS 411 + ++ ELV+ + P + + Sbjct: 486 ESQQKSELVILLKPTVYND 504 >UniRef50_B6BQP5 Type II Secretion PilQ n=2 Tax=root RepID=B6BQP5_9RICK Length = 516 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 104/438 (23%), Positives = 208/438 (47%), Gaps = 46/438 (10%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 +LIP + Q+VTL ++ + ++ + + ++N++V +V+G +S L DVPW +A Sbjct: 87 LLIPDEYKSLKQRVTLKFKNLDYKETMKLMGKIGEINVLVGDEVAGAISAELVDVPWDKA 146 Query: 71 LQTVVKSAGLITRQE--GNILSVHSIAWQNNNIARQEAEQARAQ-------ANLPLENRS 121 Q ++ + + N++ VHS + + + + P+ + Sbjct: 147 FQALLDMKNYASDIDVNSNLIRVHSPETLTSQETYKSERAQAVKNKVELEDSVEPIISEI 206 Query: 122 ITLQYADAGELAKAGEKLLSAKG-------SMTVDKRTNRLLLRDNKTALSALEQWVAQM 174 L Y E+L + G +T + T +++R + L +++ + ++ Sbjct: 207 FRLYYISPALAKSTIEELFKSTGENAYSPIKITEETATRSIIVRGKERDLDTVDKVLNEI 266 Query: 175 DLPVGQVELSAHIVTINEKSLRELGVKWTL----ADAQHAGGVGQVTTLG---------- 220 D+ QV + A +V + ++LG + D Q G VG ++ G Sbjct: 267 DIKTEQVLIEAFVVKATSEFEKQLGTRLGGYYKRNDEQIGGIVGSTSSAGTLDDTSAALA 326 Query: 221 -------SDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPA 273 ++ + AT+ +G + + +L E++ALE+ ++ I++P++ + QPA Sbjct: 327 QVAKDQITNFAATGATSGIGI-LKKTGSAVLKAEITALEKMGMVETISNPKVFTINNQPA 385 Query: 274 SIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQ 333 S+ QG EIPY+ +S + +T FKEA L ++VTP+++ G + L + ++ + + Sbjct: 386 SVTQGKEIPYETTSEGTTST--SFKEAALKLQVTPSIIGDGNVLLDIQVNNDDADTSQDE 443 Query: 334 ADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP-LLGDIPWFGQLFRHDG 392 I K EI T++ V G+ + +GGI + ++ VP LG++P G L ++ Sbjct: 444 -----PPITKMEIITKLLVADGDIVVIGGIKSNNISKAKEQVPGGLGNVPVIGNLLKYKK 498 Query: 393 KEDERRELVVFITPRLVS 410 KED+ EL++FI PR++ Sbjct: 499 KEDKLEELLIFIAPRVLD 516 >UniRef50_C1A7C5 Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7C5_GEMAT Length = 621 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 73/358 (20%), Positives = 148/358 (41%), Gaps = 11/358 (3%) Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEG-NILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 ++L ++ V G+ G LS S++ + ++ E R + Sbjct: 236 VNLKYASAEEMAGVVGSLYGVQVANAGAGSLSDRSLSRALDTFRARDQETFRTRQTTSSS 295 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 + + A + A LL + ++ + TN L++R L + + +D+ Sbjct: 296 GAATPVTGATVARDSAA--GLLVGRTTVVANTPTNSLVIRTAPPNFPMLRETIEALDIRP 353 Query: 179 GQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGR 238 QV I I E G+ W + G+ T +T + R Sbjct: 354 AQVLFEVTIAEIALGRGFEFGIDWAAVNRGGD----VQAQFGNPEIPDTGSTSALLRVVR 409 Query: 239 INGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSV--- 295 ++G + L + K ++ ++A+P ++A++ + ASI GS++P+ S+ S+ Sbjct: 410 LDGTGVRALLRTIASKSEVQVLATPEIMAANNREASILVGSKVPFISSTRLGNDISIDRA 469 Query: 296 -EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKS 354 ++++ + + PT+ +G I ++L + A I +E T+ ++ Sbjct: 470 VQYQDVGTKLAIIPTINDEGYISVQLLQEVSSLTPQTVAAALSAPVISTREASTRAVLRD 529 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G+T + G+ + +P+L DIPW G LF+ +R EL +F+TP +V S+ Sbjct: 530 GQTAVIAGLIGETRTTQDQGLPILKDIPWLGALFKRQSSTRQRTELAIFVTPYVVRSD 587 Score = 84.4 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 4/158 (2%) Query: 25 TLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTVVKSAGL 80 +L + +A V++ LA +++S ++ ++ ++ L++V+++ GL Sbjct: 68 SLDFANARLADVIRTLATMLGRTVILSDIPDVRLTFATPSAVSTSDLERVLESVLEAHGL 127 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 + G + V + L L + + LQ A E A A +L Sbjct: 128 MLVSSGTVAQVMPNDKAPMTGTLRSGFPFPDPPPLGLVTQLVPLQSIRADEGADALRAVL 187 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPV 178 + + + R+N LLL D ++ + +D Sbjct: 188 AKGARVEIVARSNALLLVDRGANMARYLDLLRTLDAAP 225 >UniRef50_C7R8G0 General secretion pathway protein D n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8G0_KANKD Length = 708 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 141/445 (31%), Gaps = 96/445 (21%) Query: 60 LHLTDVPWKQALQTVVKSAGLITRQEGNILS-------------VHSIAWQNNNIARQEA 106 + L + ++ + + +GN + + S + R Sbjct: 204 IPLEHASASEIVRILESLNRSGRQPQGNEVQEPRYVADERTNSILLSANDRQRVRLRALI 263 Query: 107 EQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK----------------------- 143 N +++ L+YA + ++A+ + K Sbjct: 264 GSLDRPLNSMGNTKTVFLKYAKSEQVAEVLSGIGEIKQKEEAAASGRGGAGAGGGVATQR 323 Query: 144 --GSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVK 201 S+ + TN L+L + + + +D+ QV + A IV I++ +ELG++ Sbjct: 324 SLYSIQSHEETNALVLTAPPDIMREFDSVIRALDIRRKQVHVEAIIVEISDNKAKELGIQ 383 Query: 202 WTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI---------------------- 239 W + G V + + Sbjct: 384 WLFSPEGSNTTPGGVVNFTNTGPGIGQVAAGAISARGTEEEVFTRDPETGEITGTETRRV 443 Query: 240 ---------------------------NGRLLDLELSALEQKQQLDIIASPRLLASHLQP 272 +G + ALE + ++ P + Sbjct: 444 GGDNGAALAEVLGGMQGLGLGVAKIRPDGFSWGAFIRALEGVTDSNTLSRPSVTTLDNVE 503 Query: 273 ASIKQGSEIPYQVSS-----GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVP 327 A K G EIP S + +VE K+ + +++TP + + +RL + + Sbjct: 504 AIFKSGQEIPIITGSTLGDNNSNPFQNVERKDVGVMLKLTPQINEGNYVRLDIEQEVSSI 563 Query: 328 GQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQL 387 +K+E++T V V G + LGG+ + VP+LGDIP G Sbjct: 564 AGSTNVDV----VTNKREVKTSVLVPDGGMVVLGGLIDDDIQQSSQKVPILGDIPVLGHA 619 Query: 388 FRHDGKEDERRELVVFITPRLVSSE 412 F+ + +R L++FI P ++ + Sbjct: 620 FKSQRTQKIKRNLMIFIHPTVLKDD 644 Score = 97.5 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 71/200 (35%), Gaps = 13/200 (6%) Query: 1 MKQW---IAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG- 56 MKQ + L + + L V D + +V++ +A+ ++V P V G Sbjct: 10 MKQLGNNLTMALCAAGLLLSSFSANAERLNVRDADIREVVETVAKITGKTMIVDPRVKGL 69 Query: 57 TVSLHL------TDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQAR 110 V++ T + ++ + ++ + + + Sbjct: 70 KVTIITAGNVDYTKDQIYNIFVSALQVHKFQAIEANGVVKIIPDQQARSEYSPVNVGNLD 129 Query: 111 AQANLPLENRSITLQYADAGELAKAGEKLLSA-KGSMTVDKRTNRLLLRDNKTALSALEQ 169 + + + I +Q DA ++ L+S G + + TN L+L D+ + + + + Sbjct: 130 DYGDRYI-TQVIPVQNVDAQQIMNVLRPLVSPTSGHLFAVQGTNTLILHDSASNVRRITE 188 Query: 170 WVAQMDLPVGQVELSAHIVT 189 + + D + E+ + Sbjct: 189 IIDRTDKANDE-EIEVIPLE 207 >UniRef50_A1JPH4 General secretion pathway protein D n=28 Tax=Yersinia RepID=A1JPH4_YERE8 Length = 648 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 133/344 (38%), Gaps = 24/344 (6%) Query: 90 SVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA------- 142 + S Q ++ Q + + + ++YA A +L + Sbjct: 246 VIISGDRHIRKKTLQMIKRLDHQQDSYGSTKVVYMKYAQASKLLDVLNGVSQGSQSDKTK 305 Query: 143 ---------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 S+ +TN L++ + + L+Q + ++D+ QV + A IV Sbjct: 306 KNSGKSHIKNVSIKAYDQTNALVITADPKVMKELDQVIERLDVRRAQVLVEAIIVETQNG 365 Query: 194 SLRELGVKWTLADAQHAGGVG--QVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 LG++W A + ++ G G G D +AL Sbjct: 366 EGLNLGIQWANKLYGGANFLQKPNSIQTNNNSGNPIPMMIAGLTAGFYKGN-WDGLFTAL 424 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA----TSVEFKEAVLGMEVT 307 +I+A+P ++ A G E+P S+ + S+ + + ++V Sbjct: 425 ATNSNNNILATPSIVTLDNMEAEFNVGQEVPVLTSTQTTATDKVYNSISRQSVGVMLKVK 484 Query: 308 PTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFTR 366 P + + + L++ + + +K+ + V VKSGET+ +GG+ + Sbjct: 485 PQINKGDSVLLEIRQEVSSVADSSDVNANNLGSVFNKRVVNNAVLVKSGETVVVGGLLDK 544 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 K + VPLLGDIP+ G LFR ++ E+ L++FI P ++ Sbjct: 545 KINKIINKVPLLGDIPFIGGLFRQSKEKIEKSNLILFIRPTILR 588 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 64/181 (35%), Gaps = 6/181 (3%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH- 61 ++ +++ + + D + + + +++ +++ P V G VS+ Sbjct: 14 WFLFKFVILAAIFPIVGYAENFSASFRDADIKEFINTVSKNINKTIIIDPKVQGLVSVRS 73 Query: 62 ---LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 L + + Q V+ G + N + A + A L Sbjct: 74 YELLDEEKYYQFFLNVLDVYGYTVVEMPNNILKVIPAKRAKGSVVPLQNNAAPPQGDELI 133 Query: 119 NRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 NR L++ A LA +L S GS+ +N +L+ ++ L ++ +D Sbjct: 134 NRVFKLKHLLAKNLAPLLRQLNDNSESGSIVNYDPSNVILITGRAAVVNRLYAIISTLDQ 193 Query: 177 P 177 P Sbjct: 194 P 194 Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 43/120 (35%), Gaps = 11/120 (9%) Query: 67 WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 L+ + ++ + + +V I + + R A + E L + Sbjct: 147 LAPLLRQLNDNSESGSIVNYDPSNVILITGRAAVVNRLYAIISTLDQPGETEVELYQLNH 206 Query: 127 ADAGELAKAGEKLLSA-----------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 A A ++ K ++++ ++ D RTN +++ ++ Q + ++D Sbjct: 207 AVAADIIKLVNQVINPVNITAKQESFNAATVVADDRTNSVIISGDRHIRKKTLQMIKRLD 266 >UniRef50_Q8VPC8 Hypothetical type II secretion protein n=6 Tax=Enterobacteriaceae RepID=Q8VPC8_ECOLX Length = 616 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 66/377 (17%), Positives = 137/377 (36%), Gaps = 59/377 (15%) Query: 90 SVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS-------- 141 + S + R+ + ++ ++ L+Y+ A +L +++ Sbjct: 185 VIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEE 244 Query: 142 ---------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 S+ K +N L++ + + +L+ + Q+D+ QV + A IV + E Sbjct: 245 AEGTVGSGREIVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAE 304 Query: 193 KSLRELGVKWTLADAQ---------------------------------HAGGVGQVTTL 219 S GV+W DA + T Sbjct: 305 GSNINFGVQWASKDAGLMQFANGTQIPIGTLGAAISQAKPQKGSTVISENGATTINPDTN 364 Query: 220 GSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 G ++A + + + A++ +++++P + Q A G Sbjct: 365 GDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSITTLDNQEAFFMVGQ 424 Query: 280 EIPYQVSS-----GESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 ++P S + +VE K+ + ++VTP + + +++ + + Sbjct: 425 DVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEGQTSLD 484 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 +++++T V GE + LGG+ + VPLLGDIP G LF+ + Sbjct: 485 V----VFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADK 540 Query: 395 DERRELVVFITPRLVSS 411 E+R L+VFI P ++ Sbjct: 541 KEKRNLMVFIRPTILRD 557 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 15/151 (9%) Query: 37 LQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ---ALQTVVKSAGLITRQEGNILSVHS 93 L + E N V+ V + +V ++ L+ ++ SAG + +V Sbjct: 58 LPLVGEGSD-NYAGDEMVTKVV--PVRNVSVRELAPILRQMIDSAGSGNVVNYDPSNVIM 114 Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG--------- 144 + + + + R R I L A A E+A+ E L G Sbjct: 115 LTGRASVVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSGENQPATLKS 174 Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + D+RTN +++ + + + + ++D Sbjct: 175 QIVADERTNSVIVSGDPATRDKMRRLIRRLD 205 >UniRef50_P03667 Virion export protein n=4 Tax=root RepID=G4P_BPIKE Length = 437 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 83/438 (18%), Positives = 174/438 (39%), Gaps = 38/438 (8%) Query: 2 KQWIAA--LLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVS 59 K+ I L L+ A + +++ PV +Q +++ +VV+PDV G ++ Sbjct: 7 KKLIFGYVALCFLMTLGIAFNVLADPVNLNNAPVRSFVQWYSQKSNKAVVVNPDVKGNIT 66 Query: 60 LH---LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQ-------- 108 + + ++V+ + G + + + + Sbjct: 67 VFNADVNQANIDDFFKSVLNANGFVLMAGDPSGVSTPSKLPSQQTDNDDDYEDSADYVPV 126 Query: 109 -------ARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG--SMTVDKRTNRLLLRD 159 A+ Q L L R+ L + ++ + + + G + N LL+ Sbjct: 127 GDSVPVSAQPQKPLDLTVRNFKLTRVRSSDVLPLAKIFVDSNGGGDVIDYPGNNSLLVSG 186 Query: 160 NKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL 219 + ++AL ++ +D+ QV + + + + + GV + A +G Sbjct: 187 SAAIMNALADFITSIDVARDQVLIQSLMFETSLVN----GVDLSFAAGSASGDKVAGGFN 242 Query: 220 GSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 S L TA + G + G NG +L L + A++ +I++PR+L Q I G Sbjct: 243 TSALG--TALSTAGGSFGIFNGNVLALSIQAVKNDSNSKVISTPRILTQSGQTGYISVGQ 300 Query: 280 EIPYQVS-------SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQ 332 +P+ + + ++E ++ + ++VTP V+ G++ L + + + Sbjct: 301 NVPFVTGKVTGEAANVNNPFQTIERRDVGVSLKVTPVVMGNGQLVLTIDTKADSLTSQMT 360 Query: 333 QADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG 392 +D + +++ ++T V++K G+TL LGG+ G SVP +P G LFR Sbjct: 361 ASD---IITNQRHMQTTVQIKDGQTLLLGGLIDSNTTDGNRSVPWFESVPVIGWLFRSHS 417 Query: 393 KEDERRELVVFITPRLVS 410 R + V +T ++ Sbjct: 418 DSHNERTMFVLLTAHVIK 435 >UniRef50_A1U289 General secretion pathway protein D n=4 Tax=Gammaproteobacteria RepID=A1U289_MARAV Length = 649 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 80/363 (22%), Positives = 150/363 (41%), Gaps = 45/363 (12%) Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG------ 144 + + R Q + + I L++ADA L + + ++ Sbjct: 240 ILRGDETFRDKMRGLILQLDQPSASGGTTKVIRLRHADAKTLTEILKGVMGEVVKEGSAG 299 Query: 145 --------------SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 S+ D+ N L++R + + + EQ VAQ+D+ QV + A IV I Sbjct: 300 GSSGGSAGNPGSSFSVFADEGLNALVVRGDPSLMQEAEQIVAQLDVRRAQVMIEAAIVEI 359 Query: 191 NEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI----------- 239 +++ +LGV+ D T L S + + +G +G Sbjct: 360 SDELGDQLGVQLAAGDESAGSFPVLGTNLTSGQGMVGLNSVIGALVGDTIPQLAGGLTVG 419 Query: 240 ------NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE---- 289 +G L + AL +++++P ++ Q + I G +P++ Sbjct: 420 AGQRDEDGVTWGLLIQALSSSSAANLLSTPSIITLDNQESEIIVGQNVPFRTGQSTVTGD 479 Query: 290 ---SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEI 346 + T++E ++ L ++VTPT+ G +RL + + ++ +K+EI Sbjct: 480 GTTNPFTTIERRDVGLSLKVTPTISADGLVRLVVEQTTEDISTTSVDGASDL-ITNKREI 538 Query: 347 ETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITP 406 +T V GET+ LGG+ + + VPLLGDIP G+LF + + +R L+VF+ P Sbjct: 539 KTTVLADDGETVVLGGLIKDDYQVSKSKVPLLGDIPVLGRLFSSESETRVKRNLLVFLRP 598 Query: 407 RLV 409 ++ Sbjct: 599 TIM 601 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 6/164 (3%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQALQTVV 75 + + L + D + + +A+ + VV P V G V++ + V+ Sbjct: 27 QEETWRLNLKDADIRAFVTQVADITGYSFVVDPRVKGKVTVLSSAPMNKDEIYDLFLAVL 86 Query: 76 KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKA 135 G ++ + + + + + L R I + A+A EL Sbjct: 87 NVHGFTAIPGEEVVKIVQQVDAKQS--AENLNRFPQTPSEQLITRVIQIDNANALELVPI 144 Query: 136 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 L++ G + N L++ D+ + ++ +EQ V ++D P Sbjct: 145 LRPLVAKYGHLAGVAAANALIVSDHASNIARIEQIVRELDSPSK 188 Score = 41.7 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 12/98 (12%) Query: 94 IAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA----------- 142 ++ +NIAR E + E I LQ A G++ ++L Sbjct: 166 VSDHASNIARIEQIVRELDSPSKYEVEVIQLQEAWVGDMVTLLQELAPEELGRAGGENAA 225 Query: 143 -KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVG 179 K S+T D+R+NRL+LR ++T + + Q+D P Sbjct: 226 RKYSVTADERSNRLILRGDETFRDKMRGLILQLDQPSA 263 >UniRef50_B8CZ92 Type II and III secretion system protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ92_HALOH Length = 602 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 79/393 (20%), Positives = 162/393 (41%), Gaps = 30/393 (7%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 +V++ V + VL+ LA L++V+ V V L L D+ +A++ ++ Sbjct: 215 DNRVSMDVSQANLGDVLRTLARLGDLDMVLFGGVRDIVDLKLEDISLDEAIEIILAGTRY 274 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 R+ + + + ++L + I ++Y + ++ + Sbjct: 275 TYRKVDGVYLI------------GDKNINSPASDLLTTSELIPMEYIEVEKVPQLLPNNF 322 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 ++ V K N LL+ ++ ++ L++++ Q+D + + + A +V + + Sbjct: 323 -PAANVKVLKEKNALLVTGTQSDINKLKEYIKQIDTRIPLIVVEAVVVELTRNRQENPVI 381 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDII 260 K + +L T+ + + L++ AL + L + Sbjct: 382 KLGMEYDGE-----------EELLFDTSMGKLTYKSVLDLPDDFYLKIEALVTEGLLTVK 430 Query: 261 ASPRLLASHLQPASIKQGSEIPYQVSSGE---SGATSVEFKEAVLGMEVTPTVLQKGRIR 317 A P + + Q A I G+ Y+V + + T + A + + VTP V G I Sbjct: 431 ARPNITTLNGQQAMIDVGTVQYYKVKQTDGEGNEETQYQSINAGVSLTVTPWVSSSGEIT 490 Query: 318 LKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 LKL + G + + ++E++T V VK G+T+ +GG+ + VP Sbjct: 491 LKLRPQVSNIGAAAAEG---PPQVSRREVDTTVRVKDGQTVVIGGLIQDVGTNTTSKVPF 547 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 L +IP G+LF+ + EL++FITPR++ Sbjct: 548 LANIPLIGKLFKSRNNNVNQTELIIFITPRVLK 580 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 59/140 (42%) Query: 7 ALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVP 66 AL ++LI + + V + V + VL L EQ +NLV V G V+++L DV Sbjct: 28 ALTVLLIVTSTVSAEELVDVTVRGADIRDVLLMLTEQSGINLVPDETVQGEVTINLRDVD 87 Query: 67 WKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQY 126 ++AL+T+ + G + + + S + + + R++ + Sbjct: 88 LQEALKTLTMAYGYHFEKVSENVYLVSRDKLEAPVDVRVKDGFLTVHATNANLRTLLREI 147 Query: 127 ADAGELAKAGEKLLSAKGSM 146 AD + + +S K S+ Sbjct: 148 ADKASINIVMDDSVSGKISI 167 Score = 55.1 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 39/91 (42%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 +T+ + + +L+ +A++ +N+V+ VSG +S+ L ++P + L ++ G Sbjct: 131 LTVHATNANLRTLLREIADKASINIVMDDSVSGKISIDLENIPLEVGLINLLHVNGFSLS 190 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQAN 114 + ++ + N R + Sbjct: 191 KSNSVYRIFKADNNTGNNLAISVVDNRVSMD 221 >UniRef50_A1TKM7 General secretion pathway protein D n=8 Tax=Comamonadaceae RepID=A1TKM7_ACIAC Length = 810 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 38/308 (12%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S G + D TN L++ + L + Q+D QV + + IV + + + G+ Sbjct: 406 STGGQIQADPSTNSLIISAPEPQFRQLRAVIDQLDGRRAQVLVESLIVEVAANKVADFGI 465 Query: 201 KWTLADAQHAGGV-------------------------GQVTTLGSDLSVATATTHVGFN 235 +W + G G V+ + S LS + A G N Sbjct: 466 QWQGVMGNYGNGTIGVIGTNSTASGGANILNLALAAASGSVSGVTSALSASGARPGNGLN 525 Query: 236 IGRI----NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG 291 + L + LE +++++P LL + A I G+ +P+ S + Sbjct: 526 VAIAPRINGNYYLGALANFLENTGDANVLSTPNLLTLDNEEAQIIIGNNVPFVTGSYANS 585 Query: 292 A--------TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDK 343 T+VE K+ L + V P + + G ++L L+ + A K Sbjct: 586 TGSSTVNPFTTVERKDVGLMLRVRPQISENGTVKLSLYQEVSQVNDGTANAVNG-PTTSK 644 Query: 344 QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVF 403 + IE+ V V G + LGG+ + GQD VPL+GD+P G LFR++ + ++ L+VF Sbjct: 645 RSIESTVLVNDGSVIVLGGLLEDRYSMGQDKVPLMGDLPVVGGLFRNENRRRQKTNLMVF 704 Query: 404 ITPRLVSS 411 + P ++ Sbjct: 705 LRPVVIRD 712 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 7/171 (4%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQ 72 + VTL + V + +A N+VV P V G ++L A Sbjct: 37 AAPSSVRPGEPVTLNFAGADIEAVARTMATITGRNVVVDPRVKGQLTLVTERAVPPAAAF 96 Query: 73 TVV----KSAGLITRQEGNILSVHSIAWQNNNI---ARQEAEQARAQANLPLENRSITLQ 125 + G + + V A + A + + L Sbjct: 97 QQFLAALRLQGFTVVESAGLYKVVPEADAKLQSGSVTVTQGGSGSAPGGGQIVTQIFKLN 156 Query: 126 YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + +A L L+S ++ V+ N L++ D L + + VA MD+ Sbjct: 157 FENAANLVPVLRPLISPNNTINVNPGNNSLVITDYADNLQRIARIVAAMDV 207 Score = 41.3 bits (96), Expect = 0.073, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 29/136 (21%) Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 L+ ++ I GN V + +N+ R A + + I L+ A A Sbjct: 166 VLRPLISPNNTINVNPGNNSLVIT--DYADNLQRIARIVAAMDVSNASDVEVIPLRNAVA 223 Query: 130 GELAKAGEKLLSAKGS--------------------------MTVDKRTNRLLLR-DNKT 162 ELA +L+ GS + + R+N L++R N Sbjct: 224 SELAPLVSRLVEGTGSTPGMATTATGTAGAIPGQSDTAYRTTLLPEPRSNSLIVRAANPA 283 Query: 163 ALSALEQWVAQMDLPV 178 L+ + V ++D Sbjct: 284 RLALVRTLVDKLDQAP 299 >UniRef50_D0Z1T0 MSHA biogenesis protein MshL n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z1T0_LISDA Length = 565 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 83/471 (17%), Positives = 167/471 (35%), Gaps = 79/471 (16%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 ++ + +V +L + N+V++P+VSG ++L L DV + L+ V G Sbjct: 74 EKRFQVNARNVEAKAFFTSLVKGTPFNMVIAPNVSGRITLKLKDVTLSEVLKVVSDMYGY 133 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAE-QARAQANLPLENRSITLQYADA---------- 129 + NI+ V + I + Q R + + S++ + Sbjct: 134 EITRADNIIQVFPATLRTEIIPVDYLQLQRRGVSLTSITTGSVSDNDSSNGSSNSNNNND 193 Query: 130 ----------------------------------GELAKAGEKLLSAKG---SMTVDKRT 152 G+L KA + ++ G S+ V + Sbjct: 194 DNNDSDSNGNNLSSGDSTTTGGTTIETTSKSDFWGQLQKAVQAMIGGAGDGRSVVVSPQA 253 Query: 153 NRLLLRDNKTALSALEQWVAQMDLP-VGQVELSAHIVTINEKSLRELGVKWTLADAQHAG 211 + + +R L +++++ + QV L A I+ + + G+ W Sbjct: 254 SLISVRAYPNELREVKKFLGMSEQRLKRQVILEAKILEVTLNDSYQQGINWGNITRSIGS 313 Query: 212 GVGQVTTLGSDLSVATATTHV-----------GFNIGRINGRLLDLELSALEQKQQLDII 260 G + V + G I + L + L+++ Sbjct: 314 GGVTIGQPSVVNPVTGLINTLPGGNDISELLGGQTNITITDGNFSAVMRFLSTQGDLNVL 373 Query: 261 ASPRLLASHLQPASIKQGSEIPYQV--------SSGESGATSVEFKEA--VLGMEVTPTV 310 +SPR+ A++ Q A IK G + + + A + + ++VTP + Sbjct: 374 SSPRVTAANNQKAVIKVGGDEYFVTNVSSSNVSGDNSTAAPDINLTPFFSGISLDVTPQI 433 Query: 311 LQKGRIRLKLHISQNVPGQVLQQ-------ADGEVL--AIDKQEIETQVEVKSGETLALG 361 +G + L +H + ++ ++ +E ++ + SG+ + +G Sbjct: 434 DDQGGVLLHVHPAVVDVTDEVKSIELGDKFGTYQLPLAKSSIRESDSIIHAHSGDVVVIG 493 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G+ VPLLGDIP G LFR+ K ++ ELV+ + P +V + Sbjct: 494 GLMKTSTHDQVSKVPLLGDIPGLGNLFRNINKVQQKTELVILLKPTVVGEQ 544 >UniRef50_Q5P193 General secretory pathway protein D n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P193_AZOSE Length = 719 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 83/375 (22%), Positives = 140/375 (37%), Gaps = 51/375 (13%) Query: 86 GNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSI----TLQYADAGELAKAGEKLLS 141 GNI V+ + +A+ + P SI L + + G L Sbjct: 269 GNIHVVYLKNAEATKVAQTLNGALAGDGSAPSATDSIASPSPLGASTPDRMTTQGAGLTP 328 Query: 142 A--------------KGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 A G + D N L++ + L + +D QV + A I Sbjct: 329 ATYRPSPESGNASDRGGMIQADPVNNALIIVAPEAIYRNLRHVIDLLDRRRAQVYIEALI 388 Query: 188 VTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGR----- 242 I+ + E G++W A+ AG + NIG + Sbjct: 389 AEISTERAAEFGIQWQSANTPGAGSSSTFFGGTNFGGAGQNIIGAAQNIGSVGKGMNFLL 448 Query: 243 -----------------LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 L L LE + +I+++P L+ + A I G +P+ Sbjct: 449 GGGTVKVPINGQMVEVFNLSLLARFLETDSRTNILSTPSLVTLDNEGAKIVVGRNLPFIT 508 Query: 286 SSGESGA---------TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG 336 + ++E ++ L +EV P + + G IRL ++ + L + G Sbjct: 509 GQYTNTGGGTTPANPFQTIERRDVGLTLEVRPQISEGGAIRLDIYQEASSVVPTLDDSAG 568 Query: 337 EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDE 396 +K+ I++ V V G +ALGG+ SG++ VPLLGDIP+ G LFR+D + Sbjct: 569 --PTTNKRSIQSTVLVDDGAIIALGGLVEDDYSSGEEKVPLLGDIPFAGSLFRYDTRRRT 626 Query: 397 RRELVVFITPRLVSS 411 + LVVF+ P ++ Sbjct: 627 KTNLVVFLRPVILRD 641 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 89/243 (36%), Gaps = 13/243 (5%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPW-----KQA 70 AA+ V+L + + V++A+ + N ++ P V GT+++ +T+ P Q Sbjct: 23 AVAAQDDTVSLNFANAEIDAVIKAIGKISGKNFLIDPRVKGTLNI-VTNTPVSRDLSYQI 81 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 L + ++ G + + + A + E R + + L + ++ A Sbjct: 82 LLSALRLQGYTAVEGPGVTKIVPEADAKLHGVPVGKEVLRGRGDS-LVTQVFAMRNESAT 140 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTI 190 ++ L+S ++T N L++ D ++ + + + +D+P G H++ + Sbjct: 141 QMLAVVRPLVSPNNTVTAFPSNNVLVVTDYADNVARIARIIDSVDVPQG----DVHVLEL 196 Query: 191 NEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSA 250 + +L G T + V ++ +SA Sbjct: 197 RHAAAVDLAATLNRLMNDGTGNGSAANTADASQRVQVVPDARTNSLLVRTENP--SRISA 254 Query: 251 LEQ 253 L Q Sbjct: 255 LRQ 257 >UniRef50_P35818 General secretion pathway protein D n=19 Tax=Pseudomonas RepID=GSPD_PSEAE Length = 658 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 82/354 (23%), Positives = 144/354 (40%), Gaps = 33/354 (9%) Query: 91 VHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL---------- 140 + Q Q A+ R I L++ DA LA+ ++ Sbjct: 253 IILGPPQARAKLVQLAQSLDTPTARSANTRVIRLRHNDAKTLAETLGQISEGMKNNGGQG 312 Query: 141 --------SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINE 192 + + D+ TN L+L + ++ALE V Q+D+P QV + A IV I+ Sbjct: 313 GEQTGGGRPSNILIRADESTNALVLLADPDTVNALEDIVRQLDVPRAQVLVEAAIVEISG 372 Query: 193 KSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVA--------TATTHVGFNIGRINGRLL 244 +GV+W + G G + + I I Sbjct: 373 DIQDAVGVQWAINKGGMGGTKTNFANTGLSIGTLLQSLESNKAPESIPDGAIVGIGSSSF 432 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEF 297 ++AL + +++++P LL Q A I G +P+Q S + + T+VE Sbjct: 433 GALVTALSANTKSNLLSTPSLLTLDNQKAEILVGQNVPFQTGSYTTNSEGSSNPFTTVER 492 Query: 298 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGET 357 K+ + ++VTP + +RL++ + QQ + L K+ I++ + ++G+ Sbjct: 493 KDIGVSLKVTPHINDGAALRLEIEQEISALLPNAQQRNNTDLITSKRSIKSTILAENGQV 552 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + +GG+ + VPLLGDIP G+LFR +R L+VF+ P +V Sbjct: 553 IVIGGLIQDDVSQAESKVPLLGDIPLLGRLFRSTKDTHTKRNLMVFLRPTVVRD 606 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 10/156 (6%) Query: 25 TLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQALQTVVKSAGL 80 T+ + D + + + ++E VV P V G VS+ L+ Q +V+ + G Sbjct: 54 TINLKDADIREFIDQISEITGETFVVDPRVKGQVSVVSKAQLSLSEVYQLFLSVMSTHGF 113 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 +G+ + A ++ R LE R I +Q + EL L+ Sbjct: 114 TVVAQGDQARIVPNAEAKTEAGGGQSAPDR------LETRVIQVQQSPVSELIPLIRPLV 167 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 G + N L++ D ++ +E + Q+D Sbjct: 168 PQYGHLAAVPSANALIISDRSANIARIEDVIRQLDQ 203 Score = 40.9 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 14/131 (10%) Query: 60 LHLTDVPWKQALQTVV----KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL 115 + + P + + + + L N L + + ++ NIAR E + Sbjct: 149 IQVQQSPVSELIPLIRPLVPQYGHLAAVPSANALII---SDRSANIARIEDVIRQLDQKG 205 Query: 116 PLENRSITLQYADAGELAKAGEKLLS-------AKGSMTVDKRTNRLLLRDNKTALSALE 168 + I L+Y + A+ +S A + D RTNRL++ A + L Sbjct: 206 SHDYSVINLRYGWVMDAAEVLNNAMSRGQAKGAAGAQVIADARTNRLIILGPPQARAKLV 265 Query: 169 QWVAQMDLPVG 179 Q +D P Sbjct: 266 QLAQSLDTPTA 276 >UniRef50_Q988A3 General secretion protein D n=1 Tax=Mesorhizobium loti RepID=Q988A3_RHILO Length = 708 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 15/285 (5%) Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 + A ++ D N LL++ +EQ ++++D+ QV L A I + Sbjct: 393 PQQDNQAPAHATVVADVENNALLIQTTARDYQRIEQILSKVDVLPTQVMLEAVIAEVTLN 452 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQ 253 + G++W + V V A A T GFN + + L+AL + Sbjct: 453 DDLKYGLRWFFENGGTKVSVTDVAK------AAAAATLPGFNWSYATDN-IQVTLNALSK 505 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT-------SVEFKEAVLGMEV 306 +++I++P ++A + Q A ++ G ++P + SV+ K+ + + V Sbjct: 506 ITDVNVISAPTIMALNNQKAILQVGDQVPILTQQSQDTGNGSAPIINSVQMKDTGVILTV 565 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 TP + GR+ L + + + +D + I +++++T+V V GE+LALGG+ + Sbjct: 566 TPRINNAGRVMLDIQQEVSNVTKTDS-SDIDSPTIQQRKVQTRVLVNDGESLALGGLIQQ 624 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 N + VP+LGDIP G F+ R EL++FI P +V Sbjct: 625 NNSVDRSQVPILGDIPILGNAFKQKDDTIRRTELIIFIRPHVVRD 669 Score = 81.7 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 65/159 (40%), Gaps = 6/159 (3%) Query: 23 KVTLMVDDVPVAQVLQA-LAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVK----S 77 K L + + P+A +A L + LN +V P V GTV+L + + AL +++ Sbjct: 91 KFELNLVNAPIADAAKAVLGDALHLNYIVDPRVQGTVTLQTSQPVSQDALVDILQSALAV 150 Query: 78 AGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 + ++ + + + + ++ + + LQ+ A E+ E Sbjct: 151 NAAGITSRAGTYQIVPLSEIMASTPPVSV-PSTSPSGPGVKVQVLQLQFIAADEMKTILE 209 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + + VD N + + + + L+A+ + V+ D+ Sbjct: 210 PITRQGSVLRVDSTRNIITVAGSDSDLNAIREAVSVFDV 248 >UniRef50_P31700 General secretion pathway protein D n=5 Tax=Enterobacteriaceae RepID=GSPD1_ERWCH Length = 712 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 122/294 (41%), Gaps = 21/294 (7%) Query: 139 LLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 + + ++ +TN L++ + LEQ + Q+D+ QV + A I I + L Sbjct: 358 IQGKEVTVRAHDQTNSLIITRPPDIMRDLEQVINQLDIRRPQVLVEAIIAEIQDADGLNL 417 Query: 199 GVKWTLADAQHAGGVGQV--------------TTLGSDLSVATATTHVGFNIGRINGRLL 244 G++W A + + A+A ++ Sbjct: 418 GIQWANKRAGMTQFTNTGIPISTAMIGTDQFRSDGTLTTAYASALSNFNGITAGFYRGNW 477 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS------GESGATSVEFK 298 + L+AL + D++A+P ++ A+ G E+P S G++ +VE K Sbjct: 478 SMLLTALSSDGKNDVLATPSIVTLDNMEATFNVGQEVPVLTGSQTTVGSGDNIFNTVERK 537 Query: 299 EAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGET 357 + + V P + + + L++ + + ++ + + + + + V V + ET Sbjct: 538 TVGIKLRVKPQINEGDSVLLQIEQEVSSVAEGNGSSNSSLGVTFNTRTVNNAVMVTNRET 597 Query: 358 LALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + +GG+ + + VPLLGDIPW G LFR + +R L++F+ P ++ Sbjct: 598 VVVGGLLDKTAIETNNKVPLLGDIPWLGSLFRSKTQTMSKRNLMLFLRPTIIRD 651 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 74/203 (36%), Gaps = 6/203 (2%) Query: 2 KQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH 61 K W L +L+ G + + + + + +++ +++ P V GT+S+ Sbjct: 8 KSWGWLGLTVLLLGSPCGWAAEFSASFKGTDIQEFINTVSKNLNKTVIIDPTVRGTISVR 67 Query: 62 LTDV----PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPL 117 D+ + Q +V+ G N + + + + A + L Sbjct: 68 SYDMMDEGQYYQFFLSVLDVYGFSVVPMDNGVLKVIRSKDAKSSSIPLANNEQPGVGDEL 127 Query: 118 ENRSITLQYADAGELAKAGEKL--LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 R + L A +LA +L + G++ + +N LL+ + L V +D Sbjct: 128 VTRVVPLNNVAARDLAPLLRQLNDNAGAGTVVHYEPSNVLLMTGRAAVIKRLVDIVNTVD 187 Query: 176 LPVGQVELSAHIVTINEKSLREL 198 + ++ + + + + +L Sbjct: 188 KTGDREMITVSLNYASAEDVAKL 210 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 15/135 (11%) Query: 60 LHLTDVPWKQALQTVVKSA---GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + L +V + + + G T +V + + I R Sbjct: 132 VPLNNVAARDLAPLLRQLNDNAGAGTVVHYEPSNVLLMTGRAAVIKRLVDIVNTVDKTGD 191 Query: 117 LENRSITLQYADAGELAKAGEKLLSAK----------GSMTVDKRTNRLLLRDNKTALSA 166 E +++L YA A ++AK L ++ D RTN +++ + Sbjct: 192 REMITVSLNYASAEDVAKLVNDLNKTDEKNALPSTMLANVVADGRTNSVVVSGEENTSPC 251 Query: 167 LEQWVAQMDLPVGQV 181 + + Q+D QV Sbjct: 252 AVEMIRQLD--RKQV 264 >UniRef50_Q47HN2 Type II and III secretion system protein:Secretin, N-terminal:Secretin/TonB, short N-terminal n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HN2_DECAR Length = 585 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 93/504 (18%), Positives = 183/504 (36%), Gaps = 97/504 (19%) Query: 6 AALLLMLIPGVQAAKPQK-VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD 64 A + + + AAKP+ L V++ PV QVL AL +++ P++SGTVSL+L + Sbjct: 54 AMVPPLQLEQPVAAKPEPRFNLAVNNAPVGQVLNALVSGTPYSMLFPPELSGTVSLNLKN 113 Query: 65 VPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSIT- 123 ++AL T+ G R +GN + V Q R + S Sbjct: 114 TTVREALDTLRDVYGYDYRFQGNRIYVQPNTIQTRIFKINYLASRRQGMSDMRVTGSSPT 173 Query: 124 -----------------------------------LQYADA---------GELAKAGEKL 139 + A +L A + Sbjct: 174 TSNPGMGSGAASGQQLSGSASGTTGGTTSSSAQRIVDSARVQTSSDFDFWKDLTLALTTI 233 Query: 140 LS--AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD-LPVGQVELSAHIVTINEKSLR 196 + ++ V+ + +L++ L +++++ + QV L A I+ ++ Sbjct: 234 VGHQDGRNVIVNPGSGVVLVKATPVELRGVDEYLKATQLVVERQVMLEAKIIEVSLNDSY 293 Query: 197 ELGVKWTLADA---------------------------QHAGGVGQVTTLGSDLSVATAT 229 + G+ W+ +GG GS ++AT Sbjct: 294 QTGINWSKFGGIANRFSLGIAAPSATLAGSGVISGSAAGVSGGTAVAAVPGSGGAMATGP 353 Query: 230 THVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG- 288 T GF LS LE + + +++SPR+ ++ Q A +K G++ + Sbjct: 354 TGRGFFGLTFQSNNFAALLSFLEGQGDVQVLSSPRIATTNNQKAVLKVGTDDYFVTGIST 413 Query: 289 ----------ESGATSVEFKEA--VLGMEVTPTVLQKGRIRLKLHISQNVP---GQVLQQ 333 ++ + + ++VTP + +G I L +H S +V + + Sbjct: 414 NVTTGTGTGGNVVTPNITLQPFFSGISLDVTPQIDDEGNIILHVHPSVSVVEEKSKSVNL 473 Query: 334 ADGEVLAI-----DKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLF 388 D + E ++ V V+ G +A+GG+ +++ + + +P + +P G LF Sbjct: 474 GDLGTYTLPLASSTINESDSIVRVQDGSIVAIGGLMSQEQNTNRYGLPGISGVPGLGLLF 533 Query: 389 RHDGKEDERRELVVFITPRLVSSE 412 + +RELV+ + ++ E Sbjct: 534 GQKSVSNRKRELVILMKSTVIRGE 557 >UniRef50_C9RLY9 Type II and III secretion system protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLY9_FIBSS Length = 603 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 93/396 (23%), Positives = 176/396 (44%), Gaps = 32/396 (8%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 ++ + V + VL+A+AE+ LNL V D++ TV + DV + L ++ + + Sbjct: 212 AGDLYSVDLQSVSLKAVLKAIAEEAGLNLAVYGDLNETVQMSFKDVSLPELLASLFRGSA 271 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 R + + L V + A + R +L++ + K Sbjct: 272 FTFRLDSSSLWV-----------------SEEGAKALADVRVFSLKHVSPEKAMAQLSKF 314 Query: 140 LS-AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLREL 198 + ++ +++ + N L+L + A++ E+ + +D+P QV L+ IV + + Sbjct: 315 MKGSELNVSEYREQNALVLGGSPRAIARAEELLKMVDVPQMQVTLACVIVEFRKGRSFAI 374 Query: 199 GVKWTLADAQH---AGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQ 255 GV+ G LG D+S + A +G I +LELS++E+ Sbjct: 375 GVRSGATRNVGERDIQARGFFDFLGKDISKSGAFGKIG-----ILPDRFELELSSMEENN 429 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSS-GESGATSVEFKEA--VLGMEVTPTVLQ 312 + ++A PR+ + A + + + Y VS G +++ + +E+TPT+ Q Sbjct: 430 EAKVLARPRVTTLNGNKAELNVTNTVYYLVSQVSADGYPITDYRSFNDGISLELTPTMTQ 489 Query: 313 KGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQ 372 G I L + G+ + I + ++T V ++ GETL LGG+ + + Sbjct: 490 DGLITLSVSPEIKTAGRSTGDGPRD---ISSRNMKTTVVLRDGETLCLGGLIRKNKTEVR 546 Query: 373 DSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 +VP LG IP G+LF + +E++ EL +FITP + Sbjct: 547 SAVPFLGSIPILGRLFSYTSEEEDESELAIFITPSV 582 Score = 55.5 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 2/126 (1%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 V + V ++ V + ++ +N++ DV G VS +L + + A + +++S G R Sbjct: 122 VVIDVKNMNVREFVKEFGLNTGVNVLADYDVDGVVSGNLRRMVPEMAFRVLMESNGFKVR 181 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 E L V N + + + L + + LQ + KA + Sbjct: 182 GERGCLRVSRAKTGNALNGSSDGAEVSVERAGDLYS--VDLQSVSLKAVLKAIAEEAGLN 239 Query: 144 GSMTVD 149 ++ D Sbjct: 240 LAVYGD 245 Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 14/136 (10%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQT 73 P P VTL DV +A+V + L+ +++ V+ HL V + L + Sbjct: 28 PKSVRTSPGAVTLDFVDVSLAEVARTLSLAYGTSILTDDAGDVRVTFHLEGVSLFEGLTS 87 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 + S GL EG + + QN IA ++ I ++ + E Sbjct: 88 LCASHGLDLVLEGRVYHIRRARVQNGTIALTDSGV------------VIDVKNMNVREFV 135 Query: 134 KAGEKLLSAKGSMTVD 149 K E L+ ++ D Sbjct: 136 K--EFGLNTGVNVLAD 149 >UniRef50_Q04SX5 Type II secretory pathway component, protein D n=7 Tax=Leptospira RepID=Q04SX5_LEPBJ Length = 598 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 69/377 (18%), Positives = 156/377 (41%), Gaps = 39/377 (10%) Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 +V G+ ++ + N + + E + + TL++++A + Sbjct: 184 DVIVYRNTNTIVLSGSGADINKLLVLINELDLKLEEASPGAIASAGDVHIYTLEHSEAEK 243 Query: 132 LAKAGEKL---------LSAKGSM-------------TVDKRTNRLLLRDNKTALSALEQ 169 +A KL LS + + K +N +++ + + + Sbjct: 244 IAATLVKLDNPVVQSEELSPEKKVPGQIPMKVEKIKAVGHKESNSVIVTATNAEWAEIRK 303 Query: 170 WVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT-- 227 + +D QV L IV + L + G+ W ++ + ++ Sbjct: 304 IIKVLDSARKQVLLEVLIVELTSSDLNDFGIDWRYKGEAFGQFNSGLSKEANIINSNGQI 363 Query: 228 ---ATTHVGFNIGRI--NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIP 282 T GF++G + + LSA + + +++++P++L Q A I G ++P Sbjct: 364 NPNVNTLSGFSLGFLKAGSEQIIGILSANQGNENFNVLSAPQVLTVDNQEAEISVGQDVP 423 Query: 283 YQV-----SSGESGATSV---EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA 334 + +G + A +V E++ + ++ TP V + RI L+L ++ Sbjct: 424 VRTQSRNAGTGGTNAVTVDNYEYRPTGIKLKFTPHVNKNNRITLELFQEIKNIAEIALAG 483 Query: 335 DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKE 394 +++EI+T + +++ +++ +GG+ + + +P LGDIP+ G LF+ ++ Sbjct: 484 GN--PTFNRREIKTSISIENTQSIVIGGLISNDKQKRIIKIPFLGDIPYLGHLFKRTTEK 541 Query: 395 DERRELVVFITPRLVSS 411 ++ L+VFITP ++ S Sbjct: 542 IKKTNLMVFITPHILDS 558 Score = 86.0 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 65/170 (38%), Gaps = 9/170 (5%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGT-VSL-HLTDVPWKQAL- 71 + + D + L+ ++ K N+++ + G +++ ++P K A Sbjct: 45 APEEPAEKSFYANWRDTELNDFLKGMSAILKKNILLDESLKGKKITIISQKEIPIKNAFI 104 Query: 72 --QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL----PLENRSITLQ 125 ++V++S G +E +++S+ I + + I ++ Sbjct: 105 FMKSVLESLGFGVVEEPDLISIVKIKDALARSPVVRVGKELIPETEVGDYRTITQIIPIE 164 Query: 126 YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 EL ++L S + V + TN ++L + ++ L + ++D Sbjct: 165 NTKPEELEPILKRLTSPNTDVIVYRNTNTIVLSGSGADINKLLVLINELD 214 >UniRef50_A1TUQ3 General secretion pathway protein D n=4 Tax=Comamonadaceae RepID=A1TUQ3_ACIAC Length = 829 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 15/286 (5%) Query: 142 AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVK 201 + D+ N +L+ K +E + ++DLP QV + A IV + + G++ Sbjct: 499 GGVRLMADELNNSVLVWGTKANYMKIEATLKRLDLPPTQVLIEASIVEVTLDDTLQYGLQ 558 Query: 202 WTLADAQHAGGVGQVTTLGSD-------LSVATATTHVGFNIGRING-RLLDLELSALEQ 253 W +A + G L + S T GF+ N + + L+AL Sbjct: 559 WAFNNAGPSNLNGAGQLLTNGPSDKTPIGSSIPTPTSSGFSYALSNSLGSVRVVLNALAT 618 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS-------GESGATSVEFKEAVLGMEV 306 K+ L +I+SP L+ A + G++ P + S G S A ++++++ + + V Sbjct: 619 KRLLKVISSPSLMVLDNHTAMMSVGNQQPVKTGSLITSVSGGNSVADTIQYRDTGVSLAV 678 Query: 307 TPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTR 366 TP+V + +++ + + +++I ++V V+SGE + LGG+ Sbjct: 679 TPSVNAGNLVTMQIDQAVTDAVADNSGSISLQPVFQQRQITSKVAVRSGEAIVLGGLIRD 738 Query: 367 KNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + S + VPLL DIP G LF ++GK R EL+V ITP++V ++ Sbjct: 739 TSNSSKSGVPLLQDIPLVGSLFSNNGKTGNRTELLVVITPKVVRTD 784 Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 6/168 (3%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQA-- 70 V A +T ++ PVA+V++ L + K N V+ P ++GTV+L + +P QA Sbjct: 88 PVPALTGAPMTFSFEEAPVAEVVRTVLGDIAKANYVLHPPLNGTVTLATRNPIPPDQAMF 147 Query: 71 -LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSI-TLQYAD 128 L++ +++ GL ++ I + + P I LQY Sbjct: 148 LLESALQANGLGMIRDARGTYHVGRPDALRAIGGTLRQFRSGEPLPPGNGAVIIPLQYIG 207 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 A E+A +++ + VD N L++ +T A V D+ Sbjct: 208 AAEMASILRPMVTPDAIVRVDNLRNVLVMSGTRTQAEAWMDLVNTFDV 255 >UniRef50_B8GXR3 Type II secretion pathway protein D n=3 Tax=Caulobacteraceae RepID=B8GXR3_CAUCN Length = 687 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 87/469 (18%), Positives = 177/469 (37%), Gaps = 91/469 (19%) Query: 33 VAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWK---QALQTVVKSAGLITRQEGNIL 89 VA + L V D + ++ LT + Q L ++ + G + + Sbjct: 164 VADYADNVRRIRGLLAQVDQDRAMVHTVTLTHSSAREIAQVLNDMLATPGAEGKSGRGAV 223 Query: 90 SVHSIAWQNNNIARQEAEQARA----------QANLPLENRSITLQYADAGELAKAGEKL 139 +V + N+ + R +++ + +A + R + L++A+A ++ ++L Sbjct: 224 TVVPVDSSNSVLLRGDSDAVQRLLPVIADLDRRAESSDDVRVVFLRHANAEQMLPVLQQL 283 Query: 140 LS------------------------------------------AKGSMTVDKRTNRLLL 157 + + ++ N L++ Sbjct: 284 VGQATTSVTTSSSRGLSNARTATGASTATTAPSAPVAATPSANGPQATIARFPGANALII 343 Query: 158 RDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHA------- 210 L + + Q+D+ QV + A +V + + + ++LGV++ L Sbjct: 344 NAPPETQRTLAEVIRQLDVRREQVLVEAIVVEVTDGTAKQLGVQFLLGGTNGTIPFVATN 403 Query: 211 -----------GGVGQVTTLGSDL------------SVATATTHVGFNIGRINGRLLDLE 247 G TT G+D S+ TA+ +GR L Sbjct: 404 YTNATPSLLPLVGAAATTTSGADTEALKSLRDAAVSSLLTASGVTSGVVGRSGDALFGAI 463 Query: 248 LSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS-----SGESGATSVEFKEAVL 302 ++A+++ +++++P ++ + A I G E+P S + +++ + + Sbjct: 464 INAVKKDTGSNLLSTPSIMTLDNEEARILVGQEVPITTGEVLGDSNANPFRTIQRQNVGI 523 Query: 303 GMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGG 362 +EV P + G I L L + + E+ I+K+EIET V G+ + LGG Sbjct: 524 QLEVKPQINAGGGITLFLRQEVSSVAGPVSVGSSEL-IINKREIETTALVDDGDIVVLGG 582 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + ++ P LGD+P G LFR +E ++ L+VFI PR++ S Sbjct: 583 LLDQQETQSAQRTPGLGDVPGLGALFRSTARERKKTNLMVFIRPRIIRS 631 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 12/172 (6%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQ 69 G Q L V D + +Q +A+ ++ P V GTV++ L + Sbjct: 25 LGPAPVLAQTQLLNVQDADIRVFIQDVAKSTGTTFIIDPRVKGTVTVASNGPLNRRELFE 84 Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 +++ + GN + A + + A L+ DA Sbjct: 85 VFLATLRANNFVATPAGNGAY--------RIEPSENAARQPSAAGGQFATEVFRLRTLDA 136 Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQV 181 + + L+ +G + + R +++ D + + +AQ+D V Sbjct: 137 ASAVEMLKPLVGPQGQVVANPRGAVVVVADYADNVRRIRGLLAQVDQDRAMV 188 >UniRef50_A5V9I3 General secretion pathway protein D n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V9I3_SPHWW Length = 682 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 128/293 (43%), Gaps = 20/293 (6%) Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 + + ++ N ++LR A++ +E +AQ+D+ QV + A IV I+ Sbjct: 347 KGFSTPDLTVQPAPELNAIVLRGTPAAIAEVEPLIAQLDVRRPQVLIEAAIVEISGDQAE 406 Query: 197 ELGVKWTLADAQHAGGVGQVTTLGSDL------------SVATATTHVGFNIGRINGRLL 244 +L V+ + A G T+ S A A G + G Sbjct: 407 QLAVQLGIGAAAINRASGGATSFTSPGLPLQSILTAIGSPAAGAVLSNGGSANIRFGDNF 466 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGE------SGATSVEFK 298 + L A+ Q + +++++P L +PA I G +P++ S + T++E + Sbjct: 467 SILLQAIGQSTRSNLLSTPSLTTLDNEPAEIVVGQNVPFRTGSFSTDGNTINPFTTIERQ 526 Query: 299 EAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETL 358 + L + V P + Q +RL++ + + A + +++ I+T V G+T+ Sbjct: 527 DVGLTLRVVPRIHQGNVVRLEVAQEVSSLTNAVTGAADLI--TNRRSIQTSVLADDGQTI 584 Query: 359 ALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 LGG+ + + VP+LGDIP G+LFR + +R L VF+ P ++ Sbjct: 585 VLGGLISDDRTQTRSQVPILGDIPIAGELFRSRKESHVKRTLFVFLKPTILRD 637 Score = 96.7 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 9/167 (5%) Query: 13 IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-HLTDVPWK--- 68 I A++ V + + V +A V + ++ L++ P V GTV++ + Sbjct: 22 ILAQGASQAADVVVNMRAVDIADVAEQISRITGRTLILDPAVKGTVNVTSAEPLSVDGVW 81 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 Q+V++ G + G + A A ++A + + R + LQ Sbjct: 82 DLFQSVLRVHGFAAVKSGRSWRIIPQA-----SAIRDAGSGGRLSGQDVTTRMVRLQNVS 136 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 + A+ L++ GS+ N +++ D + +E +D Sbjct: 137 GEQAARVFRPLVAQFGSIEAMASPNAIIVTDYAENVRRIESLARALD 183 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 81/210 (38%), Gaps = 17/210 (8%) Query: 52 PDVSGTVSLHLTDVPWKQALQTVV-KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQAR 110 DV+ + + L +V +QA + A + + + + N+ R E+ Sbjct: 123 QDVTTRM-VRLQNVSGEQAARVFRPLVAQFGSIEAMASPNAIIVTDYAENVRRIESLARA 181 Query: 111 AQANLPLENRSITLQYADAGELAKAGEKLL-----SAKGSMTVDKRTNRLLLRDNKTALS 165 + SITL+YA+A ++A A + ++ + + D+R+N +L+R +S Sbjct: 182 LDSGGGGRFDSITLRYANAKDVAAAIQGVMGDGTATGGPRVVADERSNIVLVRGEPAMVS 241 Query: 166 ALEQWVAQMDLPVGQVELSAHI----------VTINEKSLRELGVKWTLADAQHAGGVGQ 215 + +D P V ++ I + + L E G A AGG + Sbjct: 242 EARRLAHTIDKPGAGVPITRMIRLNNGDAESVTEVLQGVLGEQGTVTNPAARAVAGGRAR 301 Query: 216 VTTLGSDLSVATATTHVGFNIGRINGRLLD 245 +T S+ A +G + G L D Sbjct: 302 ITRQQSNAGAQAAGLSLGSTPATLGGGLAD 331 >UniRef50_Q1JVV5 Type II and III secretion system protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV5_DESAC Length = 665 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 79/390 (20%), Positives = 148/390 (37%), Gaps = 55/390 (14%) Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 ++ +I + N L V + + I AE + L+ ADA EL+K Sbjct: 244 TSKVIAYERTNRLVVMATSDDMTTILSLIAELDQEPTQEHARINLYYLENADAEELSKTL 303 Query: 137 EKLLS-------------------------AKGSMTVDKRTNRLLLRDNKTALSALEQWV 171 ++LS +++ DK TN L++ ++ + Sbjct: 304 NEILSGIKKPATSSSAAAGGKGTIPAAAIQTNVTVSADKPTNALVINATPEDYVIIKDII 363 Query: 172 AQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT---- 227 Q+D+ QV + A I+ ++ + LG + A G+ +++ + + + Sbjct: 364 KQLDIRRKQVYVEALIMELSMDATEALGSQLQGAFEVGNEGIVNLSSNSAPGGILSDPES 423 Query: 228 --ATTHVGFNIGRING----------------RLLDLELSALEQKQQLDIIASPRLLASH 269 T+ G G + + + ++I+++PRLL S Sbjct: 424 LLTTSVNGLLAGGFSKLIGVDTDGDGVDDSQVTAFSALIKLSKDDTNVNILSAPRLLTSD 483 Query: 270 LQPASIKQGSEIPYQVSSGESGA--------TSVEFKEAVLGMEVTPTVLQKGRIRLKLH 321 + A I G +P S SVE K+ L + TP + + +RL ++ Sbjct: 484 NEEAEIVVGRNVPIITSRLTDSTGSDSLAQSVSVERKDVALTLRFTPQITEGELVRLNVY 543 Query: 322 ISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDI 381 + + ++I V + G+T+ LGG+ + + VPLLGDI Sbjct: 544 QETTDLTDSVGDVNSVGPTFTTRKISNTVLARDGQTVVLGGLISTNQQETISKVPLLGDI 603 Query: 382 PWFGQLFRHDGKEDERRELVVFITPRLVSS 411 P G LF+ ++ + L+VFITP ++S Sbjct: 604 PLLGWLFKSKDNKEVKTNLLVFITPTIISD 633 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 69/182 (37%), Gaps = 12/182 (6%) Query: 5 IAALLLMLIPGVQAAKPQK----VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 + +L+ P A + Q +TL D+ + +++ ++E N V + G ++ Sbjct: 14 LLGSVLLAGPLTSACQAQTDGVGITLDFKDIELTDLIRTVSELTGKNFVYDDSIRGKATI 73 Query: 61 HLTDV----PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + Q TV+ G G + I + Sbjct: 74 ISSQQMSVNEAYQLFLTVLNVKGYTVVPSGKTNKIVPIKSAKESNLPTMTGNLAQDQ--- 130 Query: 117 LENRSITLQYADAGELAK-AGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 R I+L+ +A ++A+ L+ ++ V + +N L++ D+ + + L + ++D Sbjct: 131 FVTRMISLENINAADIAESILSPLMPKTSNVVVYEPSNMLIISDSASNIQRLTTIIRELD 190 Query: 176 LP 177 +P Sbjct: 191 VP 192 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 29/148 (19%) Query: 60 LHLTDVPWKQALQTVV-----KSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQAN 114 + L ++ ++++ K++ ++ + N+L + A + E A Sbjct: 136 ISLENINAADIAESILSPLMPKTSNVVVYEPSNMLIISDSASNIQRLTTIIRELDVPGAL 195 Query: 115 LPLENRSITLQYADAGELAKAGEKLLSAKGS----------------------MTVDKRT 152 + + I LQ+ADA E A +LS+ + + +RT Sbjct: 196 QDM--QVIPLQFADAKETATICNDILSSGNTKATSRRRASKNVTTSSADATSKVIAYERT 253 Query: 153 NRLLLRDNKTALSALEQWVAQMDLPVGQ 180 NRL++ ++ + +A++D Q Sbjct: 254 NRLVVMATSDDMTTILSLIAELDQEPTQ 281 >UniRef50_A8EVV0 General secretion pathway protein D n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVV0_ARCB4 Length = 478 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 91/430 (21%), Positives = 199/430 (46%), Gaps = 38/430 (8%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTV-- 58 MK+ I +LL+ + ++ + D+ V +++ ++ K N++V+ ++ V Sbjct: 1 MKK-IFIVLLLFFYALNLYSNDEININFKDIKVDDLIKITSKITKRNILVTQIINEKVDY 59 Query: 59 --SLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + +T L+T++K G +E +L V + Sbjct: 60 IPTQKITKENLFDILETILKEKGYFLVEENGVLKVKKVEIIKEEEQF------------- 106 Query: 117 LENRSITLQYADAGELAKAGEKLLSAK-------GSMTVDKRTNRLLLRDNKTALSALEQ 169 I L+ D + K + +++ K +++D +N L++ +K L ++ Sbjct: 107 --TEVIGLKNVDGVNIIKILDDVVNKKYINKTIKPFVSLDLESNSLVVMASKDELKQIKD 164 Query: 170 WVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT-- 227 + ++D QV + A I+ +N + + ++G+ + + +A + + Sbjct: 165 LIQELDKEKAQVYVQAKIIEVNNELVNKIGISYGIINASARSDGINAISSNLNGGSNAIK 224 Query: 228 -ATTHVGFNIGRIN---GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPY 283 A +G + +N G L L+ L+Q LDI++ P +LA + +SI G +I Sbjct: 225 EAVDTLGIRMSDVNIKSGLALGASLNLLQQNGALDIVSEPSILAIDNKESSIYVGEKISV 284 Query: 284 QVSSGESGA----TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL 339 ++SS + T+ E ++ L ++V P + ++ L+++ + + + G+ Sbjct: 285 EISSTLTDGGLQRTNYEREDIGLTLKVKPRISSDTKLTLEIN-TLLEGIKSTSVSAGQNP 343 Query: 340 AIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRE 399 K+EI+T + +GE++ +GG+ KN++ + VP+LGDIP FG+LF++D K +++ Sbjct: 344 DTLKKEIKTAAILNNGESVIIGGLIENKNETIEQKVPVLGDIPLFGELFKNDSKMNKKNN 403 Query: 400 LVVFITPRLV 409 LV+ +TP ++ Sbjct: 404 LVIIVTPYMI 413 >UniRef50_B8FE34 General secretion pathway protein D n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE34_DESAA Length = 716 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 84/401 (20%), Positives = 162/401 (40%), Gaps = 49/401 (12%) Query: 55 SGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQAN 114 V+ + Q + ++ + N L + + I + Q Sbjct: 261 RPRVNTKSKNA---QTVAATGDVVKIVADERTNSLIILASKDDTEAILSFVELLDKEQPT 317 Query: 115 LPLENRSITLQYADAGELAKAGE---------------KLLSAKGSMTVDKRTNRLLLRD 159 + + + LQ A A E+ K + ++S ++ DK TN +++ Sbjct: 318 GEGKIQVVYLQNATAEEVVKVLQALPGKQTDTKNKAEAPVVSKDVQISADKATNSIIIVA 377 Query: 160 NKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVT-- 217 +K L+ + ++D+P V + A I+ ++ ELGV+W L D G V Sbjct: 378 DKEDFKVLKDVIEKLDIPRSMVYIEALIMEVSTDKAFELGVEWRLGDNFEVNGDQAVGWA 437 Query: 218 --------------TLGSDLSVATATTHVGFNIGRINGRL---------LDLELSALEQK 254 ++++ A F++G I + L + A + Sbjct: 438 GSGGAGSEGAYTLFPTTAEIASGVAGFPTAFSMGVIGENIKIGDIYFPTLGAVMRAYKND 497 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA----TSVEFKEAVLGMEVTPTV 310 + I+++P +LA++ + + I G +PY S + TS E+++ + +++TP + Sbjct: 498 SDVHILSAPHILATNNEESEIYVGKNVPYVTRQDTSSSSVDYTSYEYRDVGVTLKITPQI 557 Query: 311 LQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKS 370 Q+ +RL + + K++ +T V VK G T+ +GG+ + Sbjct: 558 SQERLVRLDVFQEVTRLIETAGTTTQP--TTYKRKADTTVIVKDGNTIVIGGLIDESTEG 615 Query: 371 GQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 G VP LGDIPW G FR ++ E+ L VF+TPR++ + Sbjct: 616 GTYKVPCLGDIPWLGWAFRSKTEKREKTNLYVFLTPRIIQT 656 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 65/157 (41%), Gaps = 4/157 (2%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-HLTDVPWKQA---LQTVVKSAG 79 + + +D +A+ ++ ++E N V+ V G +++ V +A +V++ G Sbjct: 68 IQIDFEDAEIAEFVKYISEVTGKNFVLDSKVRGKITIMSPKKVTPDEAYQVFLSVLEVYG 127 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 T + G++ V R + + I++ +A ++ K + + Sbjct: 128 YATVKVGSLTKVVPAPDAKTKNPETRLFDHRISETDKVVTQLISMDFAQVEDVVKLFQPM 187 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 +S + TN L++ D ++ + L + + +D+ Sbjct: 188 VSKGSLLVAYSPTNTLIVTDVESNIQRLVKILKAIDV 224 >UniRef50_Q0C127 General secretion pathway protein D n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C127_HYPNA Length = 653 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 94/423 (22%), Positives = 172/423 (40%), Gaps = 61/423 (14%) Query: 50 VSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEG-------------NILSVHSIAW 96 + D + T ++ LT+VP + + + G + Q+G + + Sbjct: 181 LDRDQTVTETVPLTNVPAVEIETVLTRLQGDPSAQQGQAPSRLSAVASLTSNSIILRGDA 240 Query: 97 QNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG------------ 144 + A++ A + A R ITL YADA E+ E++ ++ Sbjct: 241 TSVERAKRVALELDATNPQRDHVRVITLNYADAEEVVPILERVANSMAMQRAPSETAPVA 300 Query: 145 -SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW- 202 ++ TN L++ N + A+E+ V +D+ QV + A IV +++ + RELG+++ Sbjct: 301 QTIAHHGPTNSLIISANPETILAMERVVTALDVRRPQVMVEAIIVEMSDDAARELGLQFL 360 Query: 203 -TLADAQHAGGVGQVTTLGSDLSVATA------------------------TTHVGFNIG 237 + +L T T G +G Sbjct: 361 LAGTGGDVPFASTNFSRAAPNLLALTGALVTDAFEDPAAENPFREAAISSLTGSSGLTLG 420 Query: 238 R---INGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS-----GE 289 L + L+A+E I+++P + + +++ G EIP Sbjct: 421 FGGTSGDNLFGVILNAVEDDTASRILSTPFGMTLNNATSALIVGQEIPVTTGQVLGEANS 480 Query: 290 SGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQ 349 + +VE K+ + +EVTP + + +RL + + + ++ +DK+EI Sbjct: 481 NPFRTVERKDIGIQLEVTPRIGENDTVRLDIRQEVSSVFGSVGTVTPDL-ILDKREIRAS 539 Query: 350 VEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 V GE + LGG+ + + VP+LGDIP G+LFR +GK RR L+VFI P +V Sbjct: 540 VLADDGEIIVLGGLVEQTDTLRDTKVPVLGDIPGVGRLFRSEGKAATRRNLMVFIRPTIV 599 Query: 410 SSE 412 ++ Sbjct: 600 RNK 602 Score = 92.1 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 18/187 (9%) Query: 2 KQWIAALLLML------IPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS 55 K+ + A + L A K L ++DV + +++ ++ + PDV Sbjct: 3 KRILFAAVAALSASQFATAQAPAPSQDKHVLNLEDVELNTLIEDISMLTGYTFITHPDVR 62 Query: 56 -GTVSL----HLTDVPWKQALQTVVKSAGLITRQEGN-ILSVHSIAWQNNNIARQEAEQA 109 VS+ +T Q T ++ G G + A + Sbjct: 63 RAKVSVISQTPMTTTELFQVFLTTLRIQGFAAVPAGKDTYRIVPRAIASTE------APM 116 Query: 110 RAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQ 169 I L A+A E A+ + LL A+G + + TN L++ D + L + + Sbjct: 117 SGPGPNAFVTEVIKLDRANAMEAAQMIKPLLDAQGQVVANAGTNTLVVVDYASNLERVRR 176 Query: 170 WVAQMDL 176 + +D Sbjct: 177 IIETLDR 183 >UniRef50_B0T7N8 General secretion pathway protein D n=1 Tax=Caulobacter sp. K31 RepID=B0T7N8_CAUSK Length = 681 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 69/341 (20%), Positives = 141/341 (41%), Gaps = 14/341 (4%) Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 + + + G + + + R E A + P +++ Q A Sbjct: 325 LSRVLASAFGRGGGSSAAAPGGNRPA-LDRLGVEAAASPLLAPSNGQTLPGQ--SPAPAA 381 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEK 193 + + T D+ N ++ + +E + ++D+ QV + A + ++ Sbjct: 382 PDMAGGPADGLTFTSDETNNAVVAYATPREYALIEDALRKLDVVPLQVVIEAVVTEVSLN 441 Query: 194 SLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQ 253 G +W + L + A+T GF +N + L AL Sbjct: 442 DALRYGSQWFIRSGDDR------AILSRGKTADPASTFPGFTYL-LNRSSIAATLDALSS 494 Query: 254 KQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS---GESGATSVEFKEAVLGMEVTPTV 310 ++++++P L+ + Q AS++ G ++P S S +S+E+++ + +++TP V Sbjct: 495 VTHVEVLSAPNLMVLNNQTASLEVGDQVPVSTGSALNSSSVISSIEYRDTGVLLKITPRV 554 Query: 311 LQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKS 370 G + L + + L + + I ++I T + V+ G+T+ALGG+ NK Sbjct: 555 NSGGLVLLDIAQEVSDVSPTLS-STIDSPTISVRKIATSIAVQDGQTVALGGLIRDNNKR 613 Query: 371 GQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 ++ VP L +P G L ER EL+V +TPR++ + Sbjct: 614 LRNGVPFLSAVPVLGALAGSRDNSRERTELLVLLTPRVLRN 654 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 12/163 (7%) Query: 19 AKPQKVTLMVDDVPVAQVLQA-LAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQALQT 73 V L V V + QA L + L VS SGTV+L + A++ Sbjct: 75 PSSGPVALNFPGVGVREFAQAVLGDILHLPYAVSAAASGTVTLVTPRPIARADVLPAVEE 134 Query: 74 VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELA 133 +++ GL + ++ ++ + ++ L++A L Sbjct: 135 ALRNVGLALVSRDGVQTIMTLGDARAQ------GLTVGADQPGFGSETVALRFAGPQALK 188 Query: 134 KAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + ++ + + D TN L+L + A+ V Q D+ Sbjct: 189 TLLDPIVPGVIT-SADPATNTLVLSGSAGQRRAVRDLVQQFDV 230 >UniRef50_Q21LN2 Type II and III secretion system protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21LN2_SACD2 Length = 543 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 82/450 (18%), Positives = 160/450 (35%), Gaps = 58/450 (12%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 + ++ + V+ VP L +N+V P+V+G +SL L +V + L G Sbjct: 70 EEERFDISVNQVPARDFFIGLVADSGVNVVTHPEVNGVISLDLKNVTLRNVLDVTRDVYG 129 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQAR----------------------------- 110 + G I S++ + + R Sbjct: 130 YEYKYNGGIYSIYPSKMRTELFEINYIDVQREGSTDTSVLIGEITSSGGNGSNQGGNSSN 189 Query: 111 ------AQANLPLENRSITLQYADA-GELAKAGEKLLSAKGS---MTVDKRTNRLLLRDN 160 + + +R T D +L ++ + + + V+ + +++R Sbjct: 190 QSQGKQSNQDSSSGSRVSTKNKTDFWQDLKLTLSAIVGGEANGRNVVVNPQAGLVVVRAL 249 Query: 161 KTALSALEQWVAQMDLP-VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL 219 + +SA+ +++ + +L QV L IV + + GV W Q T Sbjct: 250 PSEISAVREFLDRSELSVRRQVILETKIVEVKLNDGFQAGVNWNEIRGQMLLTKNVETFD 309 Query: 220 GSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 V+ + + LS LE + + +++SPR+ + Q A I+ GS Sbjct: 310 VPVDIVSASENVGEIFSSIFRIGDISQLLSLLETQGNVQVLSSPRVSTVNNQKAVIRVGS 369 Query: 280 EIPYQVS---------SGESGATSVEFKEA--VLGMEVTPTVLQKGRIRLKLHISQNVPG 328 + + + + A ++E + ++VTP + G + L +H + Sbjct: 370 DEFFVTGISSQTTSTAASTTSAPNIELTSFFSGISLDVTPQIADNGDVILHVHPIVSEVT 429 Query: 329 QVLQQADGEVLAID-------KQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDI 381 + +E ++ V +SG+ + LGG+ K P LGD+ Sbjct: 430 DQNKDITLGNEKFSLPLALREVRESDSIVRAQSGQIIVLGGLMKEKLNDVYSKRPGLGDV 489 Query: 382 PWFGQLFRHDGKEDERRELVVFITPRLVSS 411 P LFR K E+ ELV+ + P +V Sbjct: 490 PVLNTLFRKRSKVSEKTELVILLRPIVVED 519 >UniRef50_Q609V4 General secretion pathway protein D n=1 Tax=Methylococcus capsulatus RepID=Q609V4_METCA Length = 751 Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 8/281 (2%) Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 L + D N L++ +E + +D+ QV + A IV I+ K+ + Sbjct: 435 TQLGNNARVVADPANNALIVIAKPQDWKEIEAVIKALDVLPLQVLIDATIVEISLKNDLQ 494 Query: 198 LGVKWTLADAQHAGGVGQ-VTTLGSDLSVATATTHVGFNIGRI-NGRLLDLELSALEQKQ 255 G+KW ++ +G + L D A+ GF+ I NG + + L+ L Q+ Sbjct: 495 YGLKWLISSGSSTEALGSPLAALVKDFINGAASASGGFSYALIANGGNVKVLLNLLAQEN 554 Query: 256 QLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA------VLGMEVTPT 309 +++I+SP L+ + Q A I G ++P + S + +++ P Sbjct: 555 LVNVISSPSLMVLNNQQAKINVGDQVPVLTGTTASATIGTTQFNQFQQQQSGVTLQIRPR 614 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 V G + L++ + + P V + + +EI++ V V +G+TLALGG+ + K Sbjct: 615 VNSGGLVSLEIFQAISTPSPVEVGSGQKTFQFANREIQSVVAVPNGQTLALGGLISDKRS 674 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 Q +P L IP G +F + ER ELVV ITPR+V Sbjct: 675 ETQTGLPYLNQIPMIGWMFGSTEIKPERTELVVLITPRVVE 715 Score = 98.7 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 7/165 (4%) Query: 17 QAAKPQKVTLMVDDVPVAQVLQ-ALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ----AL 71 K K TL DD +++V + L + K+N V+SP V+G VSL T + L Sbjct: 47 SPRKEGKYTLNFDDADLSEVTKVILGDTLKVNYVLSPKVTGKVSLQTTRPLTEDEMIPTL 106 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 +T+++ G +EG + + A + + + L R I L+Y A E Sbjct: 107 ETLLRMNGAALIREGGMYKIEPDAQAAISASGPGVGLGMMEPGYQL--RVIPLRYISAAE 164 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + K E ++ K + +D+ N +++ L + + V D+ Sbjct: 165 MQKVLEPIMPPKAVLRMDETRNLVMVAGTAEELGGVMEAVQIFDV 209 >UniRef50_A3WP66 Type II secretory pathway n=2 Tax=Idiomarina RepID=A3WP66_9GAMM Length = 560 Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 68/304 (22%), Positives = 131/304 (43%), Gaps = 25/304 (8%) Query: 130 GELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP-VGQVELSAHIV 188 G L + ++ GS+ + + + + + L A+ Q++ + QV L A IV Sbjct: 237 GSLEDMIQGIVGGNGSVVLSPQAGLVSVTAQPSKLRAVGQFLDNLQSRLQRQVILEARIV 296 Query: 189 TINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLEL 248 + + G++W + G ++ +D++ ATA G N L Sbjct: 297 EVTLGDQYQQGIRWNELNMSGRFDFGFNGSVPNDIAAATADGVFGLTF---NSNRFTGFL 353 Query: 249 SALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA-------- 300 L+ + + ++++PR+ AS+ Q A IK G + Y T+V ++A Sbjct: 354 ELLQTQGSVQVLSNPRVTASNNQKAVIKIGEDEYYVTDVTSQTNTTVT-QDALTSSNVDL 412 Query: 301 -----VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAI-------DKQEIET 348 + ++VTP + G + L +H S + + + + +E +T Sbjct: 413 TPFFSGISLDVTPQISDDGEVTLHVHPSVVETKEQEKVITIGDETLRLPLARSNIRESDT 472 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 V +SGE + LGG+ + VPLLGD+P G LF++ + ++ELV+ I P + Sbjct: 473 IVRARSGEIVVLGGLMQNSTSENVEKVPLLGDLPLVGNLFKNKSNDASKKELVILIKPTV 532 Query: 409 VSSE 412 + ++ Sbjct: 533 IGAD 536 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 37/101 (36%) Query: 19 AKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSA 78 + L D V Q +L N+VV PDVSG +SL L DV + L + Sbjct: 71 GSEPRFVLQADGVAAKQFFYSLTVDTPYNIVVHPDVSGDISLDLKDVTIDETLDVISDIY 130 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN 119 G R++G ++ V+ + R + Sbjct: 131 GYEIRRDGRMIQVYPAGVRTQTFTLDYLSLKRFGLSQTQIT 171 >UniRef50_A1S2Q8 MSHA biogenesis protein MshL n=71 Tax=Gammaproteobacteria RepID=A1S2Q8_SHEAM Length = 561 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 91/475 (19%), Positives = 182/475 (38%), Gaps = 77/475 (16%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQ 69 + P + ++ + + V +L + ++ V PDV G +SL L V + Sbjct: 65 TVFAPTLPP--ERRFDVAANAVDARVFFPSLVKGTPFSVAVHPDVQGRISLSLKGVTLSE 122 Query: 70 ALQTVVKSAG--------------------------LITRQEGNILSVHSIAWQNNNIAR 103 ALQ + G L + G L+ + ++N Sbjct: 123 ALQVIEDLYGYEVSHEGKVLKVFPSGMRTETFPVNYLYMERMGVSLTSVTSGRISDNNNN 182 Query: 104 QEAEQARAQANLP---------------------------LENRSITLQYADAGELAKAG 136 +N +++R+ T + + E ++ Sbjct: 183 NNNGNNNNGSNGNNAFDNGGANNNGVNGNNTNGNNTNGTFIQSRNKTDFWGELKETLESL 242 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL-PVGQVELSAHIVTINEKSL 195 S S+ V + + +R L + +++A + QV L A ++ + Sbjct: 243 IGGTSNNRSVVVTPQAGLVTVRALPGELRQVREFLATAETHLQRQVILEAKVLEVTLSDG 302 Query: 196 RELGVKW----TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSAL 251 + G++W A A + T+ G++ ++ G I G D ++ L Sbjct: 303 YQQGIQWNKIAGSALADGNTKINFATSAGNEFGNQISSALGGVTSLSIIGSDFDAMINLL 362 Query: 252 EQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV---SSGESGATSVEFKEA-------V 301 + + +D+++SPR+ AS+ Q A IK G + + S+ +G T V E Sbjct: 363 DTQGDVDVLSSPRVTASNNQKAVIKVGKDEYFVTDVSSTTVAGTTPVTSPEVELTPFFSG 422 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVL-----QQADGEVL--AIDKQEIETQVEVKS 354 + ++VTP + +G + L +H S + +D E+ + +E +T ++ S Sbjct: 423 IALDVTPQIDGQGNVLLHVHPSVIDVKEQTKTIKISNSDLELPLAQSEIRESDTVIKAMS 482 Query: 355 GETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 G+ + +GG+ ++ VPLLGDIP+ G+ F + + + ELV+ + P +V Sbjct: 483 GDVVVIGGLMKSESLELVSKVPLLGDIPFLGEAFTNRSQSVRKTELVILLKPTVV 537 >UniRef50_C9M548 Putative bacterial type II/III secretion system short domain protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M548_9BACT Length = 531 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 86/380 (22%), Positives = 169/380 (44%), Gaps = 29/380 (7%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVS-PDVSGTVSLHLTDVPWKQALQTVVKSA 78 K +++T+ + +V VA L+ AE K +++V P+ S TV+L L DV ++AL+ + SA Sbjct: 146 KEKRLTMSLTEVKVADALRLAAEGLKCSIIVDEPETSPTVTLSLRDVTAQEALELITASA 205 Query: 79 GLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEK 138 G + G+ + V + + + +S + +AD G+ + Sbjct: 206 GYGWAKIGSTILVGPRSVLAARLGKNGL-------------KSYDVFWADPGKTGALVKS 252 Query: 139 LLSAKGS--MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLR 196 ++ G ++VD+R NR+ ++ + + +AQ+D P QV + A I+ +N+ + Sbjct: 253 IVGLVGDDAVSVDERRNRIYVKGTPAQQEQVRELLAQLDEPADQVMIKARIIEVNDDATS 312 Query: 197 ELGV-------KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELS 249 E+ +W L+ + +G + + G R+LD ++ Sbjct: 313 EMESVLQAVYHQWWLSFSSGVASLGFFDSSSPLAPSSGTAQGAGTV-----ARMLDARIA 367 Query: 250 ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPT 309 L +K + ++A P ++ A+IK + Y ++G +E +EVTP Sbjct: 368 GLVEKGKARVLADPTVVVLDGHKATIKLVDRVKYVSWRDDAGNPGYSDEEVGPRLEVTPR 427 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQA-DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKN 368 V +G + + + + Q + +V I ++E+ + V V G+ +GG+F Sbjct: 428 VGSEGGMTISMALKTGEIVQWKRGGLGEDVPQISEREVSSSVRVLDGQPFVVGGLFKESV 487 Query: 369 KSGQDSVPLLGDIPWFGQLF 388 +P+LGD+P G LF Sbjct: 488 SKTTQRIPVLGDLPLLGSLF 507 >UniRef50_O80264 Similar to Gene IV protein :Acc# A04268 n=3 Tax=root RepID=O80264_9VIRU Length = 500 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 77/398 (19%), Positives = 151/398 (37%), Gaps = 47/398 (11%) Query: 30 DVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD---VPWKQALQTVVKSAGLITRQEG 86 D P+A+ ++Q + +V+ V G+VS D + +V+++ G ++G Sbjct: 72 DTPIAEFASWYSQQTGIKVVLGQGVLGSVSFTAPDLVPAEYPAFFDSVLRAHGYYLVKDG 131 Query: 87 NILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS----- 141 N + P + Y +L+ + L Sbjct: 132 NAYVIKIAPEAKE-------------VITPAIVKLYRFNYIRNSKLSDLVQSTLKATSSE 178 Query: 142 -------AKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKS 194 S+ + TN L++ L L+ ++ +D+P Q+ + A I Sbjct: 179 FVKDKQVDNYSVEILPNTNALIVSGTAQQLEKLDVLLSAIDVPQRQIFIEAVITETELGD 238 Query: 195 LRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQK 254 ELGV A + V + + N+ + + A+ Sbjct: 239 NSELGVNLQAAFDKAGFVTNLVN-----------ASKLKDNLFIFESGDFNALVKAISGS 287 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPY----QVSSGESGATSVEFKEAVLGMEVTPTV 310 +++ P +L + I G +P+ + G + +E K+ + +EVTP V Sbjct: 288 SDTRLLSRPNILIMDRERGYITVGQNVPFLVSNSTTDGGTSVQRIERKDVGVSLEVTPHV 347 Query: 311 LQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKS 370 + + L ++ + AD + +K+ + T V VKSG+T+ LGG+ + + ++ Sbjct: 348 MGDD-VILVINQESSSVTDSTIAAD---IITNKRTLMTTVAVKSGQTIVLGGLISDEKRN 403 Query: 371 GQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 + VP+L D P G LFR ++ ++EL V I + Sbjct: 404 VESGVPVLKDTPLIGGLFRSTSTKNVQKELRVVIKSTV 441 >UniRef50_C6N6C5 Putative MSHA biogenesis protein MshL (Pilus type IV) n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6C5_9GAMM Length = 578 Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats. Identities = 87/453 (19%), Positives = 169/453 (37%), Gaps = 68/453 (15%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGL 80 PQ+ + V +VP L N+VVSP++ G ++L L V +Q LQ + + G Sbjct: 79 PQRFDIAVKNVPAQAFYMGLVADTSTNMVVSPEIKGNITLSLKRVTVEQVLQALEDTYGY 138 Query: 81 ITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLEN--------------------- 119 + + E R + + Sbjct: 139 SYNAIPGGYEILPNTLRTQIYKVNYLELQRKSRSNMTVSSGEVTAAGISGGTGTNTSSTT 198 Query: 120 ---------------RSITLQYADA-GELAKAGEKLLSAKG--SMTVDKRTNRLLLRDNK 161 T D L + ++ G S+TV+ +++ Sbjct: 199 TINNNNTQNYSAVIGDVETKSNIDFWKSLQLTLQNMIGKTGGRSVTVNPVAGLVVVYAAP 258 Query: 162 TALSALEQWVAQMD-LPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLG 220 L +E+++ + QV L A I+ +N + ++G+ W L G + Sbjct: 259 RELKQVERYLDMVQNSMDRQVILEAKILEVNLNNQFQMGINWKLF-----GASLNALSNF 313 Query: 221 SDLSVATATTHVGFNI-GRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGS 279 ++ +A A F++ N + + ALE + + +++SPR+ A + Q A+IK G Sbjct: 314 PEVDIAQADFPSAFDVDVHWNPKDFTSVIQALETQGNVQVLSSPRVSAMNNQSAAIKVGF 373 Query: 280 EIPYQVSSGESGAT-----------SVEFKEA--VLGMEVTPTVLQKGRIRLKLHISQN- 325 + + + ++ +V + ++VTP + G++ L +H + + Sbjct: 374 DEFFVTNVSQNQNIVTSSLVTQPILNVNLTPFFSGITLDVTPQIDANGQVTLHVHPTVSL 433 Query: 326 ------VPGQVLQQADGEVLAIDK--QEIETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 V Q + + +E +T V K+G+ + +GG+ G VP Sbjct: 434 VKDQRKVIDLGTQGGILNLPLANSTIRESDTIVHAKTGQVVVIGGLMQDTTSEGIGQVPW 493 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 G+IP+ G L R + ++ ELV+ + P LV+ Sbjct: 494 FGNIPFLGTLVRATKQTSQKSELVILLRPTLVN 526 >UniRef50_UPI0001C34749 hypothetical protein PretD1_16510 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34749 Length = 354 Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats. Identities = 117/322 (36%), Positives = 184/322 (57%), Gaps = 10/322 (3%) Query: 93 SIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE----KLLSAKGSMTV 148 N + A + L + L + E+ E LLS S+ Sbjct: 38 PPLVTENQPTPETAVAQVTPSKTSLTQKIFKLISTNVQEVRHLLEHPDTSLLSKNASIHH 97 Query: 149 DKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQ 208 D TN L+++++ L+ +++W+ D P QV+++AHI++ + +L+ELG++W + Sbjct: 98 DITTNSLIIKEDPDRLALIDEWIKHQDKPNKQVQITAHIISSSRTALQELGLEWGMM--- 154 Query: 209 HAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLAS 268 AGG L ++ + FN+ + LL+++L ALE++ L IIASPRL+AS Sbjct: 155 -AGGNLNANHLYRYNRYSSISGQFAFNVLSLGDGLLEMKLKALEKENLLSIIASPRLVAS 213 Query: 269 HLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPG 328 H QPASI+QG+EIPY S+ + T V+FK+AVLGM+VTP++++ +I L L IS N P Sbjct: 214 HQQPASIQQGTEIPYVTSNDKK--THVQFKDAVLGMDVTPSIVRDEKIELNLKISHNSPD 271 Query: 329 QVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLF 388 L + LAI+KQEI T V +K+ ETL LGGIF +K + + +P L IP+ G LF Sbjct: 272 TALTSSQHHHLAINKQEIATNVTIKNNETLILGGIFQQKQEKTEMGLPFLSHIPFLGTLF 331 Query: 389 RHDGKEDERRELVVFITPRLVS 410 + + ++R L+VFITP+L++ Sbjct: 332 TNTAEHTDKRVLIVFITPKLIN 353 >UniRef50_Q21EP4 Type II and III secretion system protein n=2 Tax=Alteromonadales RepID=Q21EP4_SACD2 Length = 666 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 97/471 (20%), Positives = 182/471 (38%), Gaps = 86/471 (18%) Query: 26 LMVDDVPVAQVLQAL----------AEQEKLNLVVSPDVSGTV----------------S 59 + + ++ A+VL L + + N++V D + + + Sbjct: 138 IQLKNIEAAKVLPVLRPLVPQHSHLSSYTESNVIVVSDTAPNIARLRDVIERIDTAALPT 197 Query: 60 LHLTDVPWKQALQTVVKSAGLI---------------TRQEGNILSVHSIAWQNNNIARQ 104 + + + A V L + N + S A+ Sbjct: 198 TEVVPLKYADAEDLVATLTKLDRGEKQSSTPVNQLQIVADKRNNSVLLSGEDIQRKRAKD 257 Query: 105 EAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSA---------------KGSMTVD 149 + R + L YA+A ++A K++ ++ D Sbjct: 258 LIRKLDRPPVQMGNVRVVYLNYANAKDVAATLSKVVQNMQQMQPGGKDKGGKDGATVEAD 317 Query: 150 KRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQH 209 + TN LLL + L++L V ++D+ QV + A IV IN + +ELGV+W ++ + Sbjct: 318 EDTNALLLTGSGDMLNSLLTIVERLDIKRAQVLVEAIIVDINVDANKELGVQWMFSNENN 377 Query: 210 AGGVGQVTTLGSDLSVATATTHVGFNI-------------------GRINGRLLDLELSA 250 G GS S+AT T G + G G LSA Sbjct: 378 GTFGGSSQGDGSLGSLATGTLGGGTDALTNLASGIAGNTGQLLGVAGNNGGENFIALLSA 437 Query: 251 LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSG---------ESGATSVEFKEAV 301 L+ +I+++P L+ Q ASI G +P++ S + T+++ ++ Sbjct: 438 LQTSSDANILSTPSLVTMDNQEASISVGQSVPFRTGSYSTTGTTGSVGNPFTTIQREDVG 497 Query: 302 LGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALG 361 + + VTP V + +I L + + + + + ++ +IETQ+ G+ + LG Sbjct: 498 ITLTVTPHVNEGNKILLDISQEVSSISSSVAGSADLI--TNQSKIETQLLANDGQIVILG 555 Query: 362 GIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G+ + G VPLLG IP G LF++ + ++ L+VFI ++V+ + Sbjct: 556 GLIQEDVQDGDTRVPLLGSIPLLGHLFKYQSTKFLKKNLMVFIRVKIVTDD 606 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 20/169 (11%), Positives = 63/169 (37%), Gaps = 6/169 (3%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQA 70 T+ D + +V++ +A+ +V+ P V G + + + + Sbjct: 25 PAARGSQPSYTVNFKDTDIHEVIKFVADATGKTIVIDPRVKGRIKVISQTTVNKDELFEL 84 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNN--IARQEAEQARAQANLPLENRSITLQYAD 128 T+++ Q G+++ + + ++ + E++ + I L+ + Sbjct: 85 FLTILEVHDFTAVQVGDVVRILPLKDARSSPVPVQDESDVGNRASTNGYVTEVIQLKNIE 144 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 A ++ L+ ++ +N +++ D ++ L + ++D Sbjct: 145 AAKVLPVLRPLVPQHSHLSSYTESNVIVVSDTAPNIARLRDVIERIDTA 193 >UniRef50_Q82WH1 General (Type II) secretion pathway (GSP) D protein n=1 Tax=Nitrosomonas europaea RepID=Q82WH1_NITEU Length = 697 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 129/293 (44%), Gaps = 14/293 (4%) Query: 127 ADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAH 186 A + + + G + + N L+ + +++ + Q+D+ QV + A Sbjct: 379 APSLSAEPSISGSQTNVGRLVAIEENNSLMFYGTEDEFRVIQEALKQIDVLPRQVMIEAF 438 Query: 187 IVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDL 246 + + + GV+W + TL + + A+ GF+ + Sbjct: 439 LAEVTLNNNLRYGVQWFFDSGE------NTVTLSATDVGSVASQFPGFSYIYAGKANARI 492 Query: 247 ELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKE 299 L+AL+ K ++ I+++P++ + Q AS++ G ++P + + +++ ++ Sbjct: 493 VLNALQSKTEVKILSAPKISVLNNQKASLQVGDQVPIVTQTSQGTVVSGAPVINTIQMRD 552 Query: 300 AVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLA 359 + +EV P V G + L + + Q + + I +++I + + + G T+A Sbjct: 553 TGVILEVIPRVNDNGNVILDVTQEVSEVAQTTS-SGIDSPTIQRRKIHSVIATRDGFTVA 611 Query: 360 LGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 LGG+ +G VPL+ D+P G LF+ + + R ELVV + P ++ ++ Sbjct: 612 LGGLIRENGSAGNSGVPLIKDVPVIGNLFKSNTSDIRRTELVVLLVPHVMRNQ 664 Score = 91.4 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 62/166 (37%), Gaps = 5/166 (3%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQA-LAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQA 70 A ++ L ++ + V+ L E KL+ VVSP V G ++L ++ A Sbjct: 82 AFADTGERFELNFNEADIRGVIDVVLGEMLKLDYVVSPAVQGRITLRTSRPVSKASLLSA 141 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 L+ + + + ++ +SV + + + + I L+Y +A Sbjct: 142 LEAALGTVSAVILKDEQTISVLPWSEAPQRVRPAQRFASAMPPTPGYAVEIIPLRYINAN 201 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 ++ + + + D R L++ + A+ + D+ Sbjct: 202 DMQAILDSFVPKGIVLQADTRHGHLVVAGSSQDRGAILHTIENFDV 247 >UniRef50_Q3A894 Putative type II secretion system protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A894_PELCD Length = 779 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 64/398 (16%), Positives = 156/398 (39%), Gaps = 19/398 (4%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS-GTVSLHLTDVPWKQALQTVVKSA 78 + V+L + +V + ++ +N V+ D+ + L L D Q L+ ++ Sbjct: 180 SSKPVSLEFKQTDIREVFEIFSQLAGINFVLDEDIPMEMIDLELKDSSLLQGLELLLNIY 239 Query: 79 GLITRQ-EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGE 137 L + + ++ + + ++ L + A Sbjct: 240 KLHAKPLNDKSVLIYPNSTDKTR------------QYDDYKIKTYYLSHISAKHAVNLLR 287 Query: 138 KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRE 197 +L ++ V + N L+ R+ + EQ + D +V ++ ++ + Sbjct: 288 TMLKIN-NLFVHEERNALVFRERPEVIQLAEQILDANDRADSEVLFELELIEVSHSDNWK 346 Query: 198 LGVKWTLAD-AQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQ 256 G + G + G AT F+ L + + Sbjct: 347 FGPSLNPNSVSLGLAKGGNIVASGLSAGDATTNLVQSFSSLESVYTLPTVVFDLQKTLVD 406 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT--SVEFKEAVLGMEVTPTVLQKG 314 +I+A+PR+ + + A++ G+ P + + ++++ + + +++ P + Sbjct: 407 SEILATPRIRVKNREKANVHVGNREPVITVTTTGETSTDNIQYVDVGVKLDIEPKIQLDD 466 Query: 315 RIRLKLHISQNVPGQVLQQADGEV-LAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQD 373 + L + + + A+G + L+I + +T + +K+GE +GG+ + + Sbjct: 467 TVVTNLSLEVSGVTEKNTTANGSLALSISTTKAQTTLTLKNGERTVIGGLIRDDSTKTRK 526 Query: 374 SVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 +PLLGD+P G+LF + K+ ++RE+++ ITP ++ + Sbjct: 527 IIPLLGDLPLIGRLFTNHNKDKKKREILLSITPHILQN 564 >UniRef50_C4ZLP2 Type II and III secretion system protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZLP2_THASP Length = 625 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 88/456 (19%), Positives = 157/456 (34%), Gaps = 79/456 (17%) Query: 24 VTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITR 83 ++ V D+P Q+L A+ L L + ++G VSL D P + L+ + + L Sbjct: 94 YSIDVFDIPAEQLLLAIGRDAGLELDLHAGITGNVSLQAHDRPLGELLERIARQVDLRYE 153 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSI--------------------- 122 G L V + A +R + I Sbjct: 154 LRGRHLRVRPDTPYIRSYAVDYVNLSRDMHGTVATSTQIATSGSAGGAGQRASSTGGAGN 213 Query: 123 ----TLQYADAGE----LAKAGEKLLSAKGS--------------------MTVDKRTNR 154 ++ A + L +L+ G + +++ + Sbjct: 214 ASITQIETRSANDFWNTLEHNLAAILAGPGRAPDCGGERRGESPAGCRNADLMLNRESGI 273 Query: 155 LLLRDNKTALSALEQWVAQMDLP-VGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGV 213 ++ R + LE ++A + QV + A IV + G+ WT Sbjct: 274 VMARATQRQHEQLEAFLAGVQRAARRQVMIEATIVEVTLADGYRQGIDWTRLGVPSW--- 330 Query: 214 GQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPA 273 ++ S + + N D+ L LE + +++SPRL + Q A Sbjct: 331 ----SVRPRGSGDATSGQPTLSYLSANS---DIRLELLETFGTVKVLSSPRLSVLNNQTA 383 Query: 274 SIKQGSEIPYQVSSGESG------------ATSVEFKEAVLGMEVTPTVLQKGRIRLKLH 321 +K E+ Y + + T+ + + M VTP + G I L + Sbjct: 384 MLKVVEEVVYFLVDSTTTEYDDRKQARISATTTPQSVSVGMVMSVTPQISADGDITLNVR 443 Query: 322 ISQN-------VPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDS 374 + + P L V I +EIE+ + ++SGE LGG+ + Sbjct: 444 PTISGISGFKDDPNPSLGDIPNRVPQIRTREIESMLRLRSGEVAVLGGLMEDRIDHDTGR 503 Query: 375 VPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 +PL GD+P G+LF R EL++F+ P L+ Sbjct: 504 IPLFGDLPVVGELFTRRDNNVRRTELLIFLRPLLID 539 >UniRef50_B7RHZ1 General secretion pathway protein D n=1 Tax=Roseobacter sp. GAI101 RepID=B7RHZ1_9RHOB Length = 644 Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 75/394 (19%), Positives = 145/394 (36%), Gaps = 53/394 (13%) Query: 67 WKQALQTVVKSAGLITRQEGNILSVHSIAW---QNNNIARQEAEQARAQANLPLENRSIT 123 + L A L N+L V Q ++AR R + + Sbjct: 207 ISEVLGPAGTGARLSVDVSSNVLLVRGTQRDISQIRSLARAMDTSPRVAQSETVSTSIYR 266 Query: 124 LQYADAGELAKAGEKLLS----------------------------------AKGSMTVD 149 LQ+ +A +A L+ + S+ Sbjct: 267 LQFGEATIVADLVRNTLTGSTDLTNPVAASLGEDPANPDAQSFGSGPDAAPISPVSVQAS 326 Query: 150 KRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQH 209 TN +++R + L+ + Q + +D+ QV + A IV ++ LGV+ + + Sbjct: 327 IETNSVIVRGTQRQLAEVSQLIKALDVRRPQVMIEAAIVEVSGDVAERLGVQLGIGENTE 386 Query: 210 AGGVGQVTTLGSDLS----------VATATTHVGFNIGRINGRLLDLELSALEQKQQLDI 259 G + + S A G ++G + + AL ++ Sbjct: 387 TGSIAATSFGNGGGSLQNVLVALGQSNAAALSTGLSVG-LASDSFGALIQALNTSTSANL 445 Query: 260 IASPRLLASHLQPASIKQGSEIPYQV----SSGESGATSVEFKEAVLGMEVTPTVLQKGR 315 +++P + Q A+I G +P++ + G + A +E ++ + M V P + G Sbjct: 446 LSTPSVTTMDNQSATIVVGQNVPFRTGRLTTDGGNVAEVIEREDVGITMVVKPRITAGGV 505 Query: 316 IRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSV 375 ++L++ + ++ +++ I T V ++G T+ LGG+ T V Sbjct: 506 VQLEIEQEVSSLTNQAVTGAADL-VTNRRVINTTVLAENGGTVVLGGLITDDRLQNNQKV 564 Query: 376 PLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 409 PLLGD+P G LF+ +R L VF+ P ++ Sbjct: 565 PLLGDVPVLGNLFKSRNNSRSKRTLFVFLRPTIM 598 Score = 86.7 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 20/177 (11%), Positives = 61/177 (34%), Gaps = 7/177 (3%) Query: 3 QWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL-- 60 + + L+ A + + + ++ + + ++E LV+ P+++G V++ Sbjct: 10 ALVFLAVTALVRPHVAQAQETFVINLRGADISLLAEQVSEITGRTLVLDPNLTGDVTVVS 69 Query: 61 --HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLE 118 L Q++++ G + G + + + ++ + + Sbjct: 70 QQSLDSEGVWALFQSILRVRGFAAVETGAVWQIVPELDA---RTKGSPQKIDTPGSQDVV 126 Query: 119 NRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 R + L + E + L+ G + + N +++ D + + D Sbjct: 127 TRLLRLNRLPSAEAVRVLRPLIDEAGYIEAIEDPNAIVVTDTLANVDRIVAIATTFD 183 >UniRef50_Q2JVP0 Putative type IV pilus secretin PilQ n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JVP0_SYNJA Length = 723 Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 101/457 (22%), Positives = 177/457 (38%), Gaps = 51/457 (11%) Query: 4 WIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG-TVSLHL 62 ++ P V K+TL + D PV VL L + LN+V++ T+SL + Sbjct: 269 LAVGSIIPAPPPVDLGSNAKITLTLRDAPVGDVLSLLVRRAGLNVVLNDVPPDLTISLDV 328 Query: 63 TDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSI 122 D P ++ +++ L + G + + + + + + + Sbjct: 329 ADSPLQETFNFILRLKELQATRVGQTVFIGTTLPGVGQQIVKTYRLNQLRIEETEQTFVF 388 Query: 123 TLQ----------------YADAGELAKAGEKLLSA-------KGSMTVDKRTNRLLLRD 159 E+ +L A + ++ D RTN L + Sbjct: 389 NASGTAGGGGTVEIDARQLSITPSEIRSRILAILEASNIPLAQESAIQADPRTNSLTIVA 448 Query: 160 NKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTL 219 T + ++AQ+DL QV +SA + IN + LGV A A G G T Sbjct: 449 TPTQHDVIAAYLAQIDLRSRQVLISARFIEINLDNNSSLGVALGSASGNFALGSGDNTVF 508 Query: 220 GS---------------DLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPR 264 G A + FN + L + A I+A P+ Sbjct: 509 GGTPLDQPAGSSVPNVGSFPAAGTGGSLVFNTLNRLQQSLAARIDAAIASGTAKILADPK 568 Query: 265 LLASHLQPASIKQGSEIPYQ---VSSGESGATSVEFKE--AVLGM---EVTPTVLQKGRI 316 ++ ++ A+I G E+ + +G ++V F++ A + + V + G I Sbjct: 569 VVVANNTGAAIVVGQEVITNRRLQTDPATGISTVVFEKGNAGVNLLIQNV--RIDDNGYI 626 Query: 317 RLKLHISQNVPGQVLQQADGEVLAI-DKQEIET-QVEVKSGETLALGGIFTRKNKSGQDS 374 L L + G + +DG V+++ +++ + T Q +K ETL LGG+ +++ D Sbjct: 627 TLNLLPQISSIGSQITLSDGTVISLLNQRSVGTLQTRLKDRETLFLGGLIQEEDRVSVDK 686 Query: 375 VPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 VPLL +IP G LFR + R E+VV ITP ++ Sbjct: 687 VPLLSEIPLLGSLFRRQNTTNTRSEVVVLITPVILED 723 >UniRef50_Q1V0G7 Type II Secretion PilQ n=2 Tax=Candidatus Pelagibacter ubique RepID=Q1V0G7_PELUB Length = 518 Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 95/444 (21%), Positives = 182/444 (40%), Gaps = 55/444 (12%) Query: 11 MLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQA 70 +LI + Q V+ + + ++ ++E ++N++V DV+G++S L +VPW +A Sbjct: 85 LLISEDFKSLKQNVSFKFQALDFKEAMKLMSEVGQINILVGDDVAGSISAELDNVPWDKA 144 Query: 71 LQTVVKSAGLITRQE--GNILSVHSIAWQNNNIARQEAEQARAQAN-------LPLENRS 121 ++ + NI+ V + A + + A + + P+ + Sbjct: 145 FNALLDLKNYAADIDVASNIIRVSTPANLTSQEGYKSARASAVKKKVELEDSVEPIISEI 204 Query: 122 ITLQYADAGELAKAGEKLLSAKGS--------MTVDKRTNRLLLRDNKTALSALEQWVAQ 173 L Y E +L ++ G+ +T + T +++R + L +++ + + Sbjct: 205 FRLYYITPSEAKATITELFTSVGTNGNFIPIQVTEEATTRSIIVRGKEKDLDIVDKVIRE 264 Query: 174 MDLPVGQVELSAHIVTINEKSLRELGVKWT----------------------------LA 205 +D QV + A IV + LG + L+ Sbjct: 265 IDKRTKQVLIEAFIVEATSTFEQSLGKRLGAAYTRKSLRMGGTQGGSSVGAASGTGAALS 324 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRL 265 D+ A G T + A AT+ +G + + +L LEL LE + +++P+L Sbjct: 325 DSTGAFTSGAGTDNLVNFGSAAATSGIGI-LKKTGSAVLKLELDFLEAQGLSKTVSNPKL 383 Query: 266 LASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQN 325 Q ASI QG I GE +A L + VTP ++ G + L + ++ + Sbjct: 384 FTLDNQQASINQGETIYIDGGEGEDKP-----VDASLKLIVTPNIIGDGNVMLSIQVNND 438 Query: 326 VPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFG 385 P + + G ++K EI T++ V G+ + +GGI + + VP +P G Sbjct: 439 TPNRANAASVG----VNKMEINTKLLVADGDIVVIGGIKKNNVANNRQGVPGTSKVPILG 494 Query: 386 QLFRHDGKEDERRELVVFITPRLV 409 ++ D EL+VFI PR++ Sbjct: 495 KVLSGKSNSDTMNELLVFIAPRIL 518 >UniRef50_Q0AIN2 Type II and III secretion system protein n=3 Tax=Nitrosomonas RepID=Q0AIN2_NITEC Length = 767 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 74/409 (18%), Positives = 162/409 (39%), Gaps = 23/409 (5%) Query: 14 PGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS--GTVSLHLTDVPWKQAL 71 + + + +T+ D + + + ++ +N V +V T S+ + D + L Sbjct: 178 LSLISEFSKPITMEFRDTSLKAIFELISRTAGINFVFDRNVQQEATASMFVRDNSIEDVL 237 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 + ++ + L +L+ +++ + A+Q+ Q L RS + D + Sbjct: 238 KLLLLTNQLAY----KVLNSNTLLIYPDTPAKQKDYQ-------ELVVRSFHVANTDVKQ 286 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTIN 191 + L+ A+ + V+++ N ++RD + +E+ VA D P +V L ++ + Sbjct: 287 MVAMIRGLVKAR-DIYVNEKLNLFVIRDTLEMIRLVERLVAINDFPDPEVMLDVVVLEVK 345 Query: 192 EKSLRELGVKW--TLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELS 249 + ELG ++ + G + + + GF R ++ Sbjct: 346 RDNTLELGPNMPTSVTFSAIPGVGAPAQAAADSVVKMSMIKNAGFEGLRSFTISNQAKID 405 Query: 250 ALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESG---ATSVEFKEAVLGMEV 306 D++A+PR+ + A I G++ P + + A S + + L EV Sbjct: 406 FGRTLTNADVLANPRIRVKSREKAKIHIGNKEPVFTVTNTANVGSAASATYIDVGLKFEV 465 Query: 307 TPTVLQKGRIRLKLHISQNV-PGQVLQQADG---EVLAIDKQEIETQVEVKSGETLALGG 362 P V + LK + + G+ + I + ET +E++ GET L G Sbjct: 466 EPVVRTNNEVTLKALLEVSSNLGEKRSGGGDNAATAIVIGTRTAETVLELRDGETQVLAG 525 Query: 363 IFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + + + L +IP G +F ++ + E+++ ITP ++ + Sbjct: 526 LIQDDLSRVKSGIAGLTEIPILGDIFSKQVRKHNKTEIILLITPHIIRN 574 >UniRef50_B1Y329 General secretion pathway protein D n=6 Tax=Burkholderiales RepID=B1Y329_LEPCP Length = 753 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 26/297 (8%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 S G + D TN L++ + L + Q+D QV + + IV ++ E G Sbjct: 370 STGGFIQADPATNSLIISAPEPVYRQLRGVIDQLDARRAQVYVESMIVKMDATQAAEFGF 429 Query: 201 KWT------------LADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI----NGRLL 244 +W +A G + L + A G N+G + L Sbjct: 430 QWQGLLGQSGDRYGLVAGTNFGTGGNNIVNLSVGAATGAALPGAGLNVGLLKAINGVYTL 489 Query: 245 DLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGAT---------SV 295 LE +++++P L+A + A I G +P+ S + T ++ Sbjct: 490 GALARFLESNTGANVLSTPNLIALDNEEAKIVIGQNVPFVTGSFTNTGTSNGSANPFQTI 549 Query: 296 EFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSG 355 E K+ L + V P + + G +R+ ++ + DK IET V V G Sbjct: 550 ERKDVGLTLRVKPQIGEGGTVRMVIYQENSSVVANTTTNSAG-PTTDKSAIETTVVVDDG 608 Query: 356 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE 412 + LGG+ SG+D VP L IP G LFR + ++ + L+VF+ P ++ S+ Sbjct: 609 SIMVLGGLLKDDYGSGEDRVPGLASIPLIGGLFRSENRKRTKSNLLVFLRPVVMRSQ 665 Score = 99.4 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 5/161 (3%) Query: 21 PQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTD-VPWKQALQ---TVVK 76 + VT+ + V V +A+A ++V P V GT++L+ + ++A ++ Sbjct: 53 KETVTINFVNAEVEAVSRAMATIVNRQIIVDPRVKGTMTLYSEQPLTQREAFLNYLAALR 112 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 G +L V A + + + +Q+ + L Sbjct: 113 GLGFAVVDVAGLLKVVPEAEAKLQTGTVSVGSV-LRKGDQIVTQVFKVQHENVNNLVTVL 171 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 L++ ++ + N L++ D L L + + +D+P Sbjct: 172 RPLITPNNTINANPGNNSLVITDYADNLQRLAKIIGALDVP 212 Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 26/145 (17%) Query: 49 VVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQ 108 V +V+ V++ L+ ++ I GN V + +N+ R Sbjct: 159 VQHENVNNLVTV----------LRPLITPNNTINANPGNNSLVIT--DYADNLQRLAKII 206 Query: 109 ARAQANLPLENRSITLQYADAGELAKAGEKLLSAKG-------------SMTVDKRTNRL 155 I LQ+ A +LA ++ G S+ D RTN L Sbjct: 207 GALDVPSSTGVEVIALQHGVASDLAPLVQRFADTSGVTAAGAVPSAGAVSVVADPRTNSL 266 Query: 156 LLRDN-KTALSALEQWVAQMDLPVG 179 L+R L+A+ + ++D P Sbjct: 267 LVRAPNAARLAAVMAVIDKLDRPSA 291 >UniRef50_Q7NHU7 Glr2438 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHU7_GLOVI Length = 493 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 101/453 (22%), Positives = 178/453 (39%), Gaps = 68/453 (15%) Query: 10 LMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSG-TVSLHLTDVPWK 68 + L V+ ++VTL + D PV +VLQ LA + N++ VS VS+ + Sbjct: 47 IPLGRPVELGSGERVTLALKDAPVREVLQILARRAGCNVLFGEGVSAQRVSMDVRGETLD 106 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 V+ L R+ GN + V A R+ L AD Sbjct: 107 DTFNLVLHLHNLKARRTGNTILV---------------GGEMAHNLPQTRMRTFRLNQAD 151 Query: 129 AGELAKAGEKLLSAKGS-----------------------------MTVDKRTNRLLLRD 159 + A L + GS +TVD RTN L+ Sbjct: 152 VQQAAGVLRGLGAQVGSTNLGSTQPGAATTNPDPAATSGPLRGELFVTVDARTNSLVAVG 211 Query: 160 NKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHA-GGVGQVTT 218 + AL + +AQ+D+ QV + +V +N ++ +LG + + G VG Sbjct: 212 SPRALQIAQVQLAQLDVRQRQVMIDVKLVDVNLNNVSDLGFRLGGSAGNFQLGTVGGAAD 271 Query: 219 LGSDLSVATATTHVG------FNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHL-- 270 LG+ A T G FN + L L Q+ ++ASP+LL + Sbjct: 272 LGASYPAAVGLTGGGPGNTLIFNTLGALASAMALRLDTAIQEGSARVLASPQLLVASGAG 331 Query: 271 ----QPASIKQGSEIPY---QVSSGESGATSVEFK--EAVLGMEV-TPTVLQKGRIRLKL 320 A ++ ++ + E+G ++ K + + +E+ V G + + L Sbjct: 332 FSKPTAARVEITDDVVVGATITTDRETGQSTTTIKVDKVGVSLEIAVYQVDDNGFVDVSL 391 Query: 321 HISQNVPGQVLQQADGEVLAIDKQE---IETQVEVKSGETLALGGIFTRKNKSGQDSVPL 377 + + + A G ++ + + I+ ++ ++ GET +GG+ ++ +PL Sbjct: 392 KPQVSSINDIQRDAAGNLVTLLTRRNLDIQ-RLRLRDGETFVIGGVIREIDRQLVQKMPL 450 Query: 378 LGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 LGD+P G LFR + ERRE+ + +TP ++ Sbjct: 451 LGDLPVLGALFRFQSNQHERREVALMVTPHILK 483 >UniRef50_A6GLP8 Type II and III secretion system protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLP8_9BURK Length = 807 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 73/302 (24%), Positives = 134/302 (44%), Gaps = 32/302 (10%) Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELG 199 L+ G + D TN L++ + L + ++D+ QV + + IV ++ E G Sbjct: 395 LNNGGIVQADPSTNSLIITAPEPIYRNLRSIIEKLDVRRAQVFVESLIVEVSTDKAAEFG 454 Query: 200 VKWTLADAQHAGGVGQVTTLGSDLSVAT----------ATTHVGFNIGRING-------- 241 +++ A GV + + + + G NIG I+G Sbjct: 455 IQFQGLSGVGADGVRVIGGTNFNDPGSGSNILGAATNLGSVGRGLNIGVIDGQVNIPGIG 514 Query: 242 --RLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVS----SGESGAT-- 293 L ALE K +I+++P +L + A I G +P+ SG +GAT Sbjct: 515 TISNLGFLARALESKANANILSTPNILTLDNEEAKIVIGQNVPFITGQFTNSGGNGATVN 574 Query: 294 ---SVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQV 350 ++E ++ L + V P V + G ++L + + + + +K+ IE+ V Sbjct: 575 PFQTIERQDVGLTLRVKPQVSEGGIVKLGIFQEVSSVVDSTNVSG---IITNKRSIESNV 631 Query: 351 EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 V++G + LGG+ + ++ VP LGD+P GQ FR+D + ++ L+VF+ P +V Sbjct: 632 LVETGNIIVLGGLVEDRVTGNEEKVPGLGDVPVLGQFFRYDNRRRQKTNLMVFLRPVVVR 691 Query: 411 SE 412 +E Sbjct: 692 NE 693 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 4/166 (2%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL----HLTDVPWKQAL 71 VQ ++ K L + + V++A+ VV P V GT+SL L+ K AL Sbjct: 53 VQNSQEDKFALNFVNADIDAVVRAIGSFTNQTFVVDPRVRGTISLVSPEPLSAADAKNAL 112 Query: 72 QTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGE 131 ++ G + G I V + +A Q+ + + L Y A Sbjct: 113 LAALRLQGFTIVESGGIARVLPENDAKVQADSVDPRKAMNQSGNAIVTQVFQLNYESATA 172 Query: 132 LAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLP 177 L L++ ++ N L++ D L + + +A +D P Sbjct: 173 LVPVLRPLIAPNNTIAAYPNNNTLVITDYADNLQRIARIIASIDGP 218 Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 16/125 (12%) Query: 70 ALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADA 129 L+ ++ I N V + N + + L + L++A A Sbjct: 176 VLRPLIAPNNTIAAYPNNNTLVITDYADNLQRIARIIASIDGPYSGDL--EVVPLEHALA 233 Query: 130 GELAKAGEKLLSA-------------KGSMTVDKRTNRLLLRDN-KTALSALEQWVAQMD 175 +LA ++L + S+ D RTN LLLR K L+ + +A++D Sbjct: 234 VDLAAILGRMLDEGNRGTGAAVDAGQRLSVMADPRTNSLLLRTPSKARLNLAKALIAKLD 293 Query: 176 LPVGQ 180 P Q Sbjct: 294 QPTKQ 298 >UniRef50_A0YBF4 Type II and III secretion system protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBF4_9GAMM Length = 617 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 98/441 (22%), Positives = 183/441 (41%), Gaps = 42/441 (9%) Query: 5 IAALLLMLIP--GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHL 62 + +L L+P G AA PQ +L++ D V + +A LV D SG++ + + Sbjct: 141 LLEVLKPLLPSSGYIAAYPQSNSLIIAD-EAENVKRLVA------LVRKIDASGSIDIEV 193 Query: 63 TDVPWKQALQTVVKSAGLITRQEGNILSVHSI----------AWQNNNIARQEAEQARAQ 112 ++ A L++ G S+ RQ +Q Sbjct: 194 INLLHADAENVSGLVLSLLSDTTGETFSIAPDIRSNSLLMSGDAATTRRVRQLVKQLDQP 253 Query: 113 ANLPLENRSITLQYADAGELAKAGEKL------------LSAKGSMTVDKRTNRLLLRDN 160 + R + L Y +A E+ + + S+ S+ + +N L++ Sbjct: 254 ISDNGNTRVVYLHYLEAKEVLPILKGMGAAMQENNRNAGDSSDISIEASESSNALVMTAP 313 Query: 161 KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKW--TLADAQHAGGVGQVTT 218 + L + + + Q+D+ + + A IV +++ + +GV+W +L+ A + Sbjct: 314 PSMLDVMSRVIEQIDIRRASILVEAIIVEVSKDFSQTIGVEWNTSLSANDGAEALTNFGL 373 Query: 219 LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQG 278 D S A + G N+G L + A+ + +I++SPR++ + A I G Sbjct: 374 RNIDESGAVSLLGAGLNLGFYRNGSLRVLAQAIANENDANILSSPRIMTMDNEEAEILVG 433 Query: 279 SEIPYQ-------VSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVL 331 S +P+ SS T++E + L +++TP + + I L + + Sbjct: 434 SNVPFITGQSTGSSSSTGDPFTTIERHDIGLTLKITPQINEGDSITLDILQEVETISEAT 493 Query: 332 QQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHD 391 A+ V +K+ I+T+V V+ L LGG+ + + VP LGD+P G LFR Sbjct: 494 TVANDIV--TNKRSIKTKVIVEDDAILVLGGLVSDDTQELVSKVPFLGDLPLLGGLFRTT 551 Query: 392 GKEDERRELVVFITPRLVSSE 412 ++ L+VFI P +V S+ Sbjct: 552 TDTVVKKNLMVFIHPVIVDSD 572 Score = 100 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 5/165 (3%) Query: 15 GVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHL-TDVPWKQALQT 73 + + +T+ + D + V+Q +AEQ +VV P V V++ + QA + Sbjct: 21 TPTPSTEELLTINMRDADIGSVIQWIAEQTNKKIVVDPRVRAKVTILANKGMTANQAFEV 80 Query: 74 ---VVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAG 130 ++ G + G IL + A Q + +Q E A + A Sbjct: 81 FLAMLDVYGYAVTETGGILRIFP-AVQAKSSPKQLVENFSALGGGEQILYVFKAENVSAN 139 Query: 131 ELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 L + + LL + G + ++N L++ D + L V ++D Sbjct: 140 RLLEVLKPLLPSSGYIAAYPQSNSLIIADEAENVKRLVALVRKID 184 >UniRef50_B0UFJ1 General secretion pathway protein D n=4 Tax=Methylobacterium RepID=B0UFJ1_METS4 Length = 797 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 18/281 (6%) Query: 146 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLA 205 + D+ N L++ +T + + + ++D QV L I + E GV+W L Sbjct: 472 IVADETNNSLVISATRTQYEKILRILGRLDARPTQVLLETVIAEVTLNDKLEFGVQWFLK 531 Query: 206 DAQHAGGVGQVTTLGSDLSVATATTHV---------GFNIGRINGRLLDLELSALEQKQQ 256 + + Q T S S + + GFN +N + L+AL + Sbjct: 532 NGGSRFNLAQSDTAASVASGTSGAGALVSAAMRGVPGFNYL-LNDADFHVVLNALRGVTR 590 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVEFKEAVLGMEVTPT 309 +++++SP + + A ++ G ++P SG+S +E K+ + + VTP Sbjct: 591 VNVLSSPNITVLDNRTARLQIGDQVPIVKQSGQSALAGNAPILNQIELKDTGVILSVTPR 650 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 V + G + L ++ + ++ I ++ + T V V G +LA+GG+ K + Sbjct: 651 VNKNGLVVLDINQEVSDVVPTTT-SNINSPTIRQRRVATSVAVSDGHSLAIGGMVQEKAQ 709 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 410 G +++P+LGD+P G FR+ R EL+VF+ P+++ Sbjct: 710 IGTEALPVLGDLPVIGPAFRNKSDLRVRTELIVFLRPKVIR 750 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 53/137 (38%), Gaps = 8/137 (5%) Query: 44 EKLNLVVSPDVSGTVSLH----LTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNN 99 + + V+GTV+L ++ ++ + + G+ R+ G+ + + Sbjct: 94 LGWSYSLDERVAGTVTLQTAGPVSRAALLGLFESALAARGVTLRRRGSHVQILPAGAPPP 153 Query: 100 NIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRD 159 + A + + I L++ AGE+ + + D+ N L++ Sbjct: 154 PSGVRGTPDAAGEPGA----QVIPLRWISAGEMQSILAAVAPRDLVLRADRTRNLLIVSG 209 Query: 160 NKTALSALEQWVAQMDL 176 ++ + AL + +A D+ Sbjct: 210 DRAQIQALRETIAVFDV 226 >UniRef50_C4K9Q5 General secretion pathway protein D n=1 Tax=Thauera sp. MZ1T RepID=C4K9Q5_THASP Length = 728 Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 92/435 (21%), Positives = 159/435 (36%), Gaps = 44/435 (10%) Query: 12 LIPGVQAAKPQKVTLMVD-DVPVA-QVLQALAEQEKLNLVVSPDVSGTV-SLHLTDVPWK 68 L P A+P +L+V D P L+ L P G + ++L + Sbjct: 245 LAPPQIVAEPNSNSLLVRADTPSRLAALRQLVTALDR-----PGAGGDIRVVYLRNADAV 299 Query: 69 QALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYAD 128 Q V + EG S + N + A + S L+ Sbjct: 300 Q----VAATLNAALAGEGGTSDAASTQPLSRNSGGGSGFGTDSSAPSGMGVASAPLRGTG 355 Query: 129 AGELAKAGE-KLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI 187 + + AG + G + D N L++ L + Q+D QV + A I Sbjct: 356 STSGSAAGGLSSATRGGMVQPDAVNNALIITAPDAVYRNLRAVIDQLDRRRAQVYIEALI 415 Query: 188 VTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVAT------------ATTHVGFN 235 I+ + E G +W + GV S + G N Sbjct: 416 AEISTERAAEFGFQWVAGASAGEVGVLGAQLFNSGGGNLGQLIAGSADRTRLTLPNNGLN 475 Query: 236 IGRINGR----------LLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQV 285 + G+ L + LE + +I+++P L+ + A I G +P+ Sbjct: 476 LVVGGGKVNVPGIGEVLSLGVLARFLENEVSANILSTPNLITLDNEEARIVVGRNLPFVT 535 Query: 286 SSGESGA---------TSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADG 336 + ++E ++ L + V P + + G IRL+++ + + A Sbjct: 536 GQYANTGGGTTPANPFQTIERRDVGLTLHVKPQISEGGAIRLQIYQEASAVVGSAESAAA 595 Query: 337 EVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDE 396 K+ IE+ V V G LALGG+ G++ VP+LGD+P+ G LFR+D ++ Sbjct: 596 GNSVTTKRSIESMVLVDDGAILALGGLVEDSYSGGEEKVPVLGDLPFAGSLFRYDTRKRA 655 Query: 397 RRELVVFITPRLVSS 411 + LVVF+ P ++ Sbjct: 656 KTNLVVFLRPVILRD 670 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 8/175 (4%) Query: 16 VQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPW-----KQA 70 + A + V L + + V+QA+ N ++ P V G ++L +T+ P Q Sbjct: 40 LVHAAGEPVALNFQNAEIDAVIQAIGRISGRNFLIDPRVKGKINL-VTNTPVAPELTYQI 98 Query: 71 LQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQ--ARAQANLPLENRSITLQYAD 128 L + ++ G +E + + A + + + A A L + L++ Sbjct: 99 LLSALRLQGYAAIEESGVTKLVPEADAKLHGVPVVSGRPGAGAARGDRLVTQVFALRHES 158 Query: 129 AGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVEL 183 A + L+SA ++T N L++ D L L + +D P G V + Sbjct: 159 AVHMVNVVRPLVSANNAVTAFPGNNTLVVTDYAENLRRLATVIDSIDTPQGDVAV 213 >UniRef50_B2T7P2 General secretion pathway protein D n=55 Tax=Burkholderia RepID=B2T7P2_BURPP Length = 791 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 123/303 (40%), Gaps = 32/303 (10%) Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV 200 G + D TN L++ + L + Q+D QV L A IV +N + LG+ Sbjct: 373 QQGGMIQADSATNSLIITAAEPVYRNLRAVIDQLDARRAQVYLEALIVELNSNTSGNLGI 432 Query: 201 KWTLADAQHAGGVGQVTTLGSDLSVATATTHV------------------GFNIG----R 238 +W +A+ G T + + TA G NIG Sbjct: 433 QWQVANNSIFAGTNLQTGSSNSIVNLTAAAVAAGSTGGLAGALGNGTLQQGLNIGWIHNI 492 Query: 239 INGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSS--------GES 290 + L L AL Q +++++P L+ + A I G+ +P Q S S Sbjct: 493 FGVQGLGALLQALSQTADANVLSTPNLITLDNEEAKIVVGTNVPIQTGSYSNLTSATATS 552 Query: 291 GATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEV--LAIDKQEIET 348 + + + L + V P + G ++L+L+ + A K+ I++ Sbjct: 553 AFNTYDRVDVGLTLHVKPQITDGGILKLQLYTEDSAIVTGTNNAATNPAGPEFTKRSIQS 612 Query: 349 QVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRL 408 V +GE + LGG+ + VPLLGDIPW GQLFR + K + L+VF+ P + Sbjct: 613 TVLADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSEQKTRNKTNLMVFLRPVI 672 Query: 409 VSS 411 +S Sbjct: 673 ISD 675 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 84/221 (38%), Gaps = 8/221 (3%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 +++ ALL+ + Q A+ Q VTL + + QV +A+ ++V P V G ++L Sbjct: 8 LRRVATALLVAGLITAQTAQAQ-VTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNL 66 Query: 61 HLTD-VPWKQALQTV---VKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 + VP QAL+T+ ++ G Q+ +L V A Sbjct: 67 VSENAVPEDQALKTLQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNTPVARGDQ 126 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 + + L+ A L L+S ++ N +++ D + + Q + +D Sbjct: 127 VVTQVFVLKNESANNLLPVLRPLISPNNTVAAYPANNTIVVTDYADNVRRIAQIIQGVDS 186 Query: 177 PVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVT 217 GQ S +V + + ++ + + G T Sbjct: 187 AAGQ---SVSVVQLKNANAIDIATQLNKMLDPGSIGSTDAT 224 >UniRef50_Q1Q9C2 Type II and III secretion system protein n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1Q9C2_PSYCK Length = 750 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 29/295 (9%) Query: 145 SMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTL 204 S+ D+ N +++ + +E V Q+D QV + A IV ++ +LGV+W L Sbjct: 370 SIIADETQNAVIVNAAPELMFEIEDAVNQLDSRRSQVLIQAAIVEVSGDDATQLGVQWAL 429 Query: 205 ADAQHAGGVGQVTTLGSDLSVATATTHVGFNI---------------------GRINGRL 243 +A GV +G+ A G + N + Sbjct: 430 GNANSGYGVVNFNNVGASAVSLAAAALSGGTGISAAAGSIAGALLGIGSSSKDSKGNAQF 489 Query: 244 LDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGA-------TSVE 296 L AL+ ++++ P +L + ASI G +P+ S +G+ +++ Sbjct: 490 YGAILQALDSSTSANLLSMPSILTLDNEKASILVGQNVPFVTGSYTTGSDSSTNPFQTID 549 Query: 297 FKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGE 356 ++ + + V P + G +RL++ + + +K I T + + Sbjct: 550 RQDIGINLNVIPHIGANGTVRLEVSQEVSSVVPGSAGNASGL-ITNKSLINTTILADDQQ 608 Query: 357 TLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 T+ALGG+ + + Q VP LG++P G+LFR D ++ L++F+ P ++ Sbjct: 609 TIALGGLMRDNSTTRQQKVPGLGNVPLIGRLFRSDNDNSQKSNLIIFLQPTILRD 663 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 10/179 (5%) Query: 5 IAALLLMLIPGVQAA----KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL 60 + L + IP A+ + + + D + + +A N V+ P ++G V++ Sbjct: 22 LCRPLCLAIPLWAASTGLVSAESWKVNLQDADIKAFINEVATITNQNFVLDPRINGNVTV 81 Query: 61 ----HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLP 116 L+ Q +V++ G+ G + + + Sbjct: 82 ISNKPLSRDEIYQLFLSVMQVNGIAAIDSGTTIKLVPDNVAKQTGVAVDLRGESV--GET 139 Query: 117 LENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 L R I L A E+ L+ N L+L D +L+ L + +D Sbjct: 140 LATRVIYLTNTQAAEVLGVIRPLMPPSAHAAAVPGVNALVLSDRADSLNQLTALIRDLD 198 Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 89/245 (36%), Gaps = 35/245 (14%) Query: 30 DVPVAQVLQALAEQEKLNLV-----VSPDVSGTVSLHLTDVPWKQALQTVV-KSAGLITR 83 + V +A+Q + + V ++ V ++LT+ + L + Sbjct: 111 GTTIKLVPDNVAKQTGVAVDLRGESVGETLATRV-IYLTNTQAAEVLGVIRPLMPPSAHA 169 Query: 84 QEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAK 143 ++ ++ + +++ + A +N+ + I L++ DA + + L+++ Sbjct: 170 AAVPGVNALVLSDRADSLNQLTALIRDLDSNVNDSLQVIPLRHVDAERMMELISALVASA 229 Query: 144 GS----------MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVE--LSA------ 185 GS + D ++RLL++ + ++ +++ V Q+D + L Sbjct: 230 GSGQATGNNQLKVIADTASDRLLVKGSPEMIAKVQEMVNQLDTTPSRRLSGLRVFRLKYA 289 Query: 186 ---HIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGR 242 HI + L + +GG + + + + AT ++ G ++ Sbjct: 290 SAGHIAEMLRGLLASQSIN-------SSGGSSTLESASLNDAAATGSSLTGGANSKVGSN 342 Query: 243 LLDLE 247 + Sbjct: 343 SIGGT 347 >UniRef50_B9K747 ComE protein n=6 Tax=Thermotogaceae RepID=B9K747_THENN Length = 1282 Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats. Identities = 87/395 (22%), Positives = 164/395 (41%), Gaps = 35/395 (8%) Query: 20 KPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAG 79 K+++ ++V + +++ A + ++++ S TV++ + + W++ L V ++ G Sbjct: 920 SDGKLSIRAENVSLYDLIKEAASEIGVSMMFVDSPSETVTMRVDGITWEKFLDLVSQNYG 979 Query: 80 LITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKL 139 + + + V L R + ++ E Sbjct: 980 YLFDLKNGVYVVSRPKQ-------------------DLAKRYFYDIPHNFDQIKALIEFY 1020 Query: 140 LSAKGSMTVDKRTNRLLLRDNKTALS-ALEQWVAQMDLPVGQVELSAHIVTINEKS--LR 196 G++ VD N +++ + L++ V + P QVE+SA IV + + Sbjct: 1021 ---GGTVYVDSLNNFMVVTGISETIKKELDRIVENLKKPTKQVEISAKIVDKSLIDMVTK 1077 Query: 197 ELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQ 256 E+G++ + GV ++ S T I I L L+ S + Sbjct: 1078 EMGLQLS------GTGVDLSSSGASISFSVTDYLDFEKVINEILNSPLSLQFSDQKSNTL 1131 Query: 257 LDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRI 316 DI+ASPR++ + + A I G IPY + G V+F E + + +TP V I Sbjct: 1132 DDILASPRIVTTSGKEAKILIGDRIPYVTDTNGDGTPEVQFLETGIELSITPFVRSDDTI 1191 Query: 317 RLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVP 376 L L + + PG + EV +E T + VK+ T+ +GG+ + +P Sbjct: 1192 ELDLFVKASEPGNYI----NEVPGERTREATTHLIVKNNSTIVIGGLIREVTNMSESKLP 1247 Query: 377 LLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 GD+P GQ FR + E+R+L++F+T R+V Sbjct: 1248 FFGDLPVIGQFFRTKSESKEKRDLMIFVTVRVVEP 1282 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 61/177 (34%), Gaps = 20/177 (11%) Query: 18 AAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVS-GTVSLHLTDVPWKQALQTVVK 76 +++ + +++P +++ LAE+ LN++VS V T SL L +V + AL+ ++ Sbjct: 121 PRSKERIDVSFENMPFEDMVKYLAERLDLNVIVSESVKNATTSLKLNNVTPEDALRDLLV 180 Query: 77 SAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAG 136 + G + + R + + +A Sbjct: 181 TFG---------------EVAYAYFPDGTMFIGKYEEVSGRFQRFWGIYRVENQSVADRI 225 Query: 137 EKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHI-VTINE 192 + L+S + + + L + + ++ + + V +N+ Sbjct: 226 KSLISQEAMIDYLPSKSVLFVYGTSEEHDLVASLLS---VSPPLQQKEVSFSVEVNK 279 >UniRef50_C1SHL2 General secretion pathway protein D n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHL2_9BACT Length = 616 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 135/330 (40%), Gaps = 39/330 (11%) Query: 120 RSITLQYADAGELAKAGEKLLS------------AKGSMTVDKRTNRLLLRDNKTALSAL 167 + L A+A ++ K KL + ++ D TN +++ + S + Sbjct: 259 KVFYLNNANAEDVEKVLSKLTGVENEDKGKKASNSTSTVAFDAATNSIIVFGSPDLYSKV 318 Query: 168 EQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHA--------GGVGQVTTL 219 E + ++D P QV + A I+ + ++ + GV+W + + G G +T+ Sbjct: 319 EGLIEKLDRPREQVYVEALIIETSIENGSDFGVEWQVGAGNDSQAGTIGYLGSDGALTSF 378 Query: 220 GSDL----SVATATTHVGFNIGRING---------RLLDLELSALEQKQQLDIIASPRLL 266 S + S GFN+G + L + + ++ ++I+++P++L Sbjct: 379 QSSVLDGDSPNFGALSSGFNLGILGDIVTYEGVSFPTLGILANFVKTASGINILSNPQIL 438 Query: 267 ASHLQPASIKQGSEIPYQVS----SGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHI 322 + A I G P+ S S + S ++++ + + + P + I LK+ Sbjct: 439 TLDNEEAEIFVGENRPFLTSTKYDSNNNPVQSYDYRDVGVKLNIVPQISSNDTITLKIEQ 498 Query: 323 SQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIP 382 + +T+V++K G + + G+ +++ SVP L IP Sbjct: 499 EVKKVSGATADVV--APVTLTRSTKTKVKLKDGAIMVISGLLKDDSETYNSSVPWLSSIP 556 Query: 383 WFGQLFRHDGKEDERRELVVFITPRLVSSE 412 G LF++ E+ ++VFI+ ++ ++ Sbjct: 557 VIGWLFKNKNSSSEKTNMMVFISTSIIRTQ 586 Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 10/180 (5%) Query: 1 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVS-PDVSGTVS 59 M LL L+ ++ + D+ + + + ++E N V D+ G VS Sbjct: 1 MSFIRVMFLLYLLAFSSFVYAAEINVNFRDMEMQEFVSFVSEFTGRNFVYDKKDLKGQVS 60 Query: 60 LHLTDV----PWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANL 115 + + + + +++ GL G + + + ++ A Sbjct: 61 IESSSEMGTDDIMEIFASTLRANGLELVDRGTYVEIVRQSDISDIADSDGVGDGNA---- 116 Query: 116 PLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMD 175 L +T DA LA KL S G + V K N +++RD ++ L++ + +++ Sbjct: 117 -LITTILTSHNYDASLLAGTLIKLKSKAGYVDVLKGLNAIVIRDRIDRITKLKKLMEKLE 175 >UniRef50_Q4UYQ6 Type II secretion system protein D n=6 Tax=Proteobacteria RepID=Q4UYQ6_XANC8 Length = 690 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 77/462 (16%), Positives = 167/462 (36%), Gaps = 84/462 (18%) Query: 33 VAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQ-------- 84 +A L L + D + ++ L + ++ +T+ G + Sbjct: 164 IADYADNLRRIRGLVAQIDTDRAAIDTVTLRNSSAQELARTLTTLFGQAGERSAVLSVLP 223 Query: 85 -EGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLS-- 141 E + + + A +A + + LQ+A A +L ++L+ Sbjct: 224 VESSNSLIVRGDPALVQRVVRTALDLDGRAERRGDVSVVRLQHASAEQLLPVLQQLVGQT 283 Query: 142 -----------------------------------AKGSMTVDKRTNRLLLRDNKTALSA 166 + + +N L++ + A Sbjct: 284 PGNEAEPGQETRPTAVDVAASAGAAQAQVIAPAAGKRPVIVRYPGSNALIINADPETQRA 343 Query: 167 LEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVA 226 L + Q+D+ QV + A +V I++ + + LGV+ LA + G+ + Sbjct: 344 LMDVIRQLDVHREQVLVEAIVVEISDTAAKRLGVQLLLAGRNGTVPLLATQYSGAAPGIV 403 Query: 227 TATTHVGFN--------------------------------IGRINGRLLDLELSALEQK 254 G+ N + + + A++ Sbjct: 404 PLAAAAAGTRSNNGEDDSVLEQARNVAAQSLLGLSGGLIGLAGQSNDAVFGMIIDAVKSD 463 Query: 255 QQLDIIASPRLLASHLQPASIKQGSEIPYQVS-----SGESGATSVEFKEAVLGMEVTPT 309 +++++P ++ + A I G E+P + ++ +++ ++ + +EV P Sbjct: 464 TGSNLLSTPSIMTLDNEQARILVGQEVPITTGEVLGAANDNPFRTIQRQDVGVELEVRPQ 523 Query: 310 VLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNK 369 + G I L + + + E+ +K++IET+V V++G +ALGG+ + ++ Sbjct: 524 INTAGGITLAIKQEVSAIAGPVSTQSSEL-VFNKRQIETRVVVENGAIVALGGLLDQNDR 582 Query: 370 SGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSS 411 + VPLLGD+P G LFRH + ++ L+VFI P ++ Sbjct: 583 QTVEKVPLLGDVPGLGALFRHKSRNRDKTNLMVFIRPTIIRD 624 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 11/156 (7%) Query: 26 LMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLH----LTDVPWKQALQTVVKSAGLI 81 + + DV + +Q ++ + +V V G+V++ +++ L V+++ GLI Sbjct: 34 VRMQDVDLRAFIQDVSRATGITFIVDTRVQGSVNVARAQAMSEADLLGMLLAVLRANGLI 93 Query: 82 TRQEG-NILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLL 140 G + + + A NL + TLQ DA A+ + L+ Sbjct: 94 AVSSGPSTYRIIPDDTAAQQPG------SAASGNLGFATQVFTLQRVDARSAAEILKPLV 147 Query: 141 SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 176 G + + N LL+ D L + VAQ+D Sbjct: 148 GRGGVIMAMPQGNSLLIADYADNLRRIRGLVAQIDT 183 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.166 0.460 Lambda K H 0.267 0.0509 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,590,474,953 Number of Sequences: 3077464 Number of extensions: 128358536 Number of successful extensions: 283820 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2316 Number of HSP's successfully gapped in prelim test: 791 Number of HSP's that attempted gapping in prelim test: 271626 Number of HSP's gapped (non-prelim): 5237 length of query: 412 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 281 effective length of database: 637,248,572 effective search space: 179066848732 effective search space used: 179066848732 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 95 (40.9 bits)