BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (158 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr... 249 1e-65 UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr... 219 2e-56 UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr... 192 4e-48 UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B... 176 2e-43 UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam... 172 4e-42 UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr... 171 5e-42 UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba... 170 1e-41 UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro... 162 3e-39 UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr... 155 3e-37 UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de... 154 1e-36 UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri... 151 6e-36 UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des... 149 3e-35 UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts... 144 1e-33 UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi... 143 2e-33 UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria... 142 3e-33 UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo... 140 9e-33 UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr... 140 2e-32 UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur... 139 3e-32 UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob... 137 1e-31 UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba... 134 8e-31 UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir... 133 2e-30 UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob... 131 9e-30 UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn... 130 1e-29 UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob... 129 2e-29 UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn... 129 2e-29 UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla... 127 9e-29 UniRef50_UPI00016C498C transcription elongation factor greA n=1 ... 125 3e-28 UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c... 123 2e-27 UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba... 118 6e-26 UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido... 117 1e-25 UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri... 115 4e-25 UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis... 115 6e-25 UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba... 113 2e-24 UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp... 113 2e-24 UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga... 113 3e-24 UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid... 112 3e-24 UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba... 112 4e-24 UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The... 112 5e-24 UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl... 110 2e-23 UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac... 110 2e-23 UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De... 108 4e-23 UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo... 107 1e-22 UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F... 106 2e-22 UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote... 106 2e-22 UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom... 106 3e-22 UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba... 106 3e-22 UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ... 105 3e-22 UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl... 105 5e-22 UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci... 105 6e-22 UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi... 104 7e-22 UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid... 104 1e-21 UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut... 103 1e-21 UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob... 103 1e-21 UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mol... 102 3e-21 UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc... 102 3e-21 UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac... 102 4e-21 UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac... 101 8e-21 UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke... 101 9e-21 UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ... 100 1e-20 UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel... 100 3e-20 UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P... 100 3e-20 UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi... 99 4e-20 UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Ga... 99 5e-20 UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter... 99 5e-20 UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th... 99 6e-20 UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga... 99 6e-20 UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr... 98 9e-20 UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr... 98 1e-19 UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop... 97 1e-19 UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur... 97 2e-19 UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr... 97 2e-19 UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi... 96 3e-19 UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ... 96 3e-19 UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostrid... 96 4e-19 UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi... 96 4e-19 UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco... 96 4e-19 UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ... 96 5e-19 UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria... 95 7e-19 UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc... 95 9e-19 UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo... 94 9e-19 UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill... 94 1e-18 UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob... 94 1e-18 UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr... 94 1e-18 UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell... 94 1e-18 UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba... 94 2e-18 UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach... 94 2e-18 UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac... 94 2e-18 UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx... 94 2e-18 UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom... 93 2e-18 UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob... 93 3e-18 UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro... 93 4e-18 UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ... 92 5e-18 UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti... 92 6e-18 UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh... 92 7e-18 UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erw... 91 2e-17 UniRef50_UPI000190F158 transcription elongation factor GreA n=1 ... 90 2e-17 UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu... 90 3e-17 UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat... 90 3e-17 UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo... 89 4e-17 UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ... 89 6e-17 UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc... 88 7e-17 UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel... 87 2e-16 UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Pro... 86 3e-16 UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel... 86 4e-16 UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisp... 86 4e-16 UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Hal... 86 4e-16 UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc... 86 5e-16 UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax... 86 5e-16 UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe... 85 6e-16 UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ... 85 8e-16 UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro... 85 9e-16 UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L... 85 9e-16 UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The... 84 1e-15 UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba... 83 3e-15 UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La... 83 3e-15 UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc... 83 3e-15 UniRef50_UPI0001A44114 transcription elongation factor GreA n=1 ... 83 3e-15 UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother... 82 4e-15 UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Ba... 81 1e-14 UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru... 81 1e-14 UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse... 80 2e-14 UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R... 80 2e-14 UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Act... 79 4e-14 UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ... 79 4e-14 UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobac... 79 6e-14 UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero... 79 6e-14 UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre... 78 1e-13 UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bi... 78 1e-13 UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Ac... 77 1e-13 UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clost... 77 1e-13 UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac... 77 2e-13 UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo... 77 2e-13 UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gem... 77 2e-13 UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob... 77 2e-13 UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Acti... 76 3e-13 UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol... 74 1e-12 UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer... 74 2e-12 UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Co... 74 2e-12 UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 ... 74 2e-12 UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Co... 73 3e-12 UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur... 72 5e-12 UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac... 72 6e-12 UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa... 71 9e-12 UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote... 71 1e-11 UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=unc... 70 2e-11 UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bif... 70 2e-11 UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte... 70 2e-11 UniRef50_C6UNA6 Putative transcription elongation factor GreA n=... 70 3e-11 UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomy... 70 3e-11 UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri... 69 4e-11 UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu... 68 8e-11 UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho... 68 1e-10 UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte... 67 1e-10 UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu... 67 2e-10 UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy... 67 2e-10 UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chtho... 67 3e-10 UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil... 66 4e-10 UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia m... 66 4e-10 UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac... 64 2e-09 UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri... 64 2e-09 UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidi... 64 2e-09 UniRef50_A2VH02 Transcription elongation factor greA (Transcript... 63 2e-09 UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul... 63 3e-09 UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromon... 63 3e-09 UniRef50_B3DVF3 Transcription elongation factor GreA fused to un... 62 5e-09 UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro... 62 5e-09 UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi... 62 6e-09 UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla... 62 7e-09 UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Ter... 59 6e-08 UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell... 58 1e-07 UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 T... 57 1e-07 UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse... 57 2e-07 UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victi... 56 3e-07 UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococ... 56 5e-07 UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap... 55 5e-07 UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax... 55 6e-07 UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi... 54 1e-06 UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T... 54 2e-06 UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococ... 54 2e-06 UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alph... 54 2e-06 UniRef50_UPI0001746370 transcript cleavage factor/unknown domain... 53 2e-06 UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul... 53 2e-06 UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida... 53 3e-06 UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta... 53 3e-06 UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostrid... 53 4e-06 UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Ch... 53 4e-06 UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac... 52 6e-06 UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi... 52 6e-06 UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte... 51 1e-05 UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akker... 51 1e-05 UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag... 50 3e-05 UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu... 50 3e-05 UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9... 50 3e-05 UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl... 50 3e-05 UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, famil... 49 4e-05 UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu... 49 5e-05 UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh... 48 8e-05 UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deino... 47 1e-04 UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro... 47 2e-04 UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella... 44 0.001 UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/G... 44 0.002 UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot... 44 0.002 UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bactero... 43 0.003 UniRef50_A4VNK9 Transcription elongation factor n=1 Tax=Pseudomo... 43 0.003 UniRef50_Q2SLP2 Transcription elongation factor n=1 Tax=Hahella ... 42 0.005 UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote... 42 0.005 UniRef50_A5VFW5 GreA/GreB family elongation factor n=3 Tax=Sphin... 42 0.006 UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T... 42 0.006 UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseud... 42 0.007 UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain... 42 0.007 UniRef50_Q0BS89 Transcription elongation factor greB n=1 Tax=Gra... 41 0.012 UniRef50_D0R7I9 Putative elongation factor n=1 Tax=Paenibacillus... 41 0.014 UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=... 40 0.018 UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin... 40 0.019 UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,... 40 0.021 UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=... 40 0.025 UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap... 39 0.043 UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy... 39 0.060 UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom... 39 0.060 UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,... 38 0.082 >UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria RepID=GREA_BAUCH Length = 158 Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 116/158 (73%), Positives = 146/158 (92%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M IPMTLRGAE+LREEL++LK+VRRPEII IAEARE+GDLKENAEYHAAREQQGFCEG Sbjct: 1 MNQIPMTLRGAEQLREELNYLKNVRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI++IE+KLS+AQ+IDVTK+ +G+V+FG TV+V NL+ +EEQTYRIVGDDEA+FK NLI Sbjct: 61 RIQEIESKLSHAQIIDVTKLFPSGKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S++SPIARGLIGK++ D+V+IKTP GEV+++++K+EYL Sbjct: 121 SISSPIARGLIGKKKGDIVLIKTPRGEVKYQILKIEYL 158 >UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria RepID=GREA_ALHEH Length = 158 Score = 219 bits (558), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 107/157 (68%), Positives = 128/157 (81%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +P+T RGAEKLREEL LK+V RP II AIAEAREHGDLKENAEYHAAREQQ F EG Sbjct: 1 MSKVPLTARGAEKLREELQRLKTVERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI++IE KLSNAQVID + G+VIFGATV +++ DS +E TY+IVG+DEAD KQ L+ Sbjct: 61 RIQEIEGKLSNAQVIDPAAVNAQGKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLV 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SVNSPIAR LIGKEE D+V ++ PGGE E+E+++V Y Sbjct: 121 SVNSPIARALIGKEEGDLVTVQAPGGEREYEIVEVRY 157 >UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria RepID=GREA_PSEPK Length = 160 Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 91/154 (59%), Positives = 117/154 (75%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 PMT++GA L EE FL RP + AI EARE GDLKENAEYHAARE+QG E RI+D Sbjct: 7 PMTVQGARALEEEHLFLSKTERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARIRD 66 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 IE +L N+ VIDVT +P+ G+VIFG TV + N ++DEE TY+IVG+DEAD KQ +S + Sbjct: 67 IEGRLQNSVVIDVTTIPHTGKVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSSGA 126 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 PIAR +IGKEE D VV+KTP G VE+E+++V+++ Sbjct: 127 PIARAIIGKEEGDTVVVKTPSGTVEYEIVEVKHI 160 >UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria RepID=GREA_ANASK Length = 166 Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 88/158 (55%), Positives = 118/158 (74%), Gaps = 1/158 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 MQ +PMT G +L++EL LKSV RP+I+ IAEAR HGDL ENAEYHAA+E+Q EG Sbjct: 1 MQRVPMTKGGLVRLKDELRRLKSVERPKIVKEIAEARAHGDLSENAEYHAAKEKQSHIEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI +E +++A+VIDVTK + RV+FGATV++ + +S ++ TYRIVG+ EAD KQ I Sbjct: 61 RIAQVEHWIASAEVIDVTKHAGD-RVVFGATVSLEDAESGDQVTYRIVGELEADLKQGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 SV SPIAR LIG+ E D VV+++PGGE E+E+ V ++ Sbjct: 120 SVTSPIARALIGRSEGDTVVVRSPGGEKEYEIQSVAFV 157 >UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria RepID=GREA_VESOH Length = 159 Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 85/157 (54%), Positives = 111/157 (70%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M IP+T GA+ L L LK V RP II I AR HGDLKENAEYHAA+E+Q F EG Sbjct: 1 MNNIPVTAFGAKALEAALLKLKDVSRPRIIEDIRIARAHGDLKENAEYHAAKEEQSFVEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK+IE KLS Q+IDVTK+ +GR +FG T+T++N + E TY+IVG+DEAD + I Sbjct: 61 RIKEIELKLSRMQIIDVTKLSQDGRCVFGTTITLMNSVDNSEITYQIVGEDEADISLDKI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S +SPIA L+G EE D V++K P G++ ++++ VEY Sbjct: 121 SCHSPIASALMGNEEGDKVIVKAPKGDIVYKILSVEY 157 >UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria RepID=GREA_BUCCC Length = 159 Score = 171 bits (434), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 86/155 (55%), Positives = 118/155 (76%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 IPMTLRG KL+ EL LK + RP I+ AIA AR+ GDLKENAEYH+ARE+Q FCE RI Sbjct: 5 IPMTLRGFNKLKSELKKLKYITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENRIC 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +IE KL AQ+ID+TK+P G VIFG+TVTVL + + Y IVGDDEA++K+ IS++ Sbjct: 65 EIENKLLRAQIIDITKIPFKGIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSISIH 124 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 SP++R LIGK+++D++ + TP G +++ + K+EY+ Sbjct: 125 SPMSRALIGKKKNDIIKVNTPTGYIKYIIKKIEYI 159 >UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria RepID=GREA_BRUA1 Length = 157 Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 84/158 (53%), Positives = 116/158 (73%), Gaps = 1/158 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ PMT RG EKL+EEL + + RP II AIAEAR HGDL ENAEYHAA+E Q EG Sbjct: 1 MEKFPMTPRGFEKLKEELRWRQQSERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++E ++ A+VIDV+K+ + R+ FGATVT+++ D++EE+ Y+IVGD EAD K+ I Sbjct: 61 RINELEDLVARAEVIDVSKLTGD-RIKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S++SPIAR LIGK E D + + PGG +E+I ++++ Sbjct: 120 SISSPIARALIGKGEGDTIEVNAPGGSRSYEIIALKFV 157 >UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria RepID=GREA_AZOC5 Length = 157 Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 83/157 (52%), Positives = 113/157 (71%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ IPMT G L EEL F + V RP II+AI+EAR HGDL ENAEYHAA+E Q EG Sbjct: 1 MEKIPMTGAGFVALEEELRFRQQVERPRIISAISEARAHGDLSENAEYHAAKELQSLNEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++E K+S A+VIDV+K+ + V FGATVT+++ D++EE+ ++IVGD EAD K I Sbjct: 61 RIAELEDKISRAEVIDVSKLSGD-IVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+AR LIGK++ V + TP G FE+++V + Sbjct: 120 SISSPVARALIGKKKGSSVEVVTPKGARSFEIVEVRW 156 >UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria RepID=GREA_GEOLS Length = 158 Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 78/154 (50%), Positives = 109/154 (70%), Gaps = 1/154 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 IP+T E L+EEL L RP++I IAEAR HGDL ENAEY AA+ +QGF EGRI+ Sbjct: 5 IPLTKESYEALQEELKRLIREERPKVIQDIAEARSHGDLSENAEYDAAKNRQGFIEGRIQ 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +++ KL+ A V+D+T + + +V+FGATVT+ + S+EE TY+IVG+DEAD K IS Sbjct: 65 ELQGKLARAHVVDLTGLKPD-KVVFGATVTLYDTASEEEITYKIVGEDEADIKLGKISCT 123 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+ + LIG + DD V +K P G E+E+I+++Y Sbjct: 124 SPVGKALIGHKLDDSVKVKVPAGTKEYEIIEIKY 157 >UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon subdivisions RepID=GREA_HELPJ Length = 164 Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 79/157 (50%), Positives = 107/157 (68%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M PM++ G K+ EL LK V RP I+ I AR HGDLKENAEYHAA+E+Q F E Sbjct: 1 MNKEPMSMHGYNKICAELKQLKEVERPNIVKEIDIARGHGDLKENAEYHAAKEKQRFIEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI D+ ++NAQVID + + +N +V FG+T+ +LNLD+D+E +Y IVG E+D + LI Sbjct: 61 RIVDLSEIVANAQVIDPSALAHN-KVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S SPIA+ LIGK + D V I+ P GE +FE++ + Y Sbjct: 120 SFGSPIAKSLIGKSKGDAVSIQLPNGESDFEILDIYY 156 >UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia RepID=GREA_RICCK Length = 162 Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 77/154 (50%), Positives = 108/154 (70%), Gaps = 1/154 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 P+T +G +KL EL LK V R +I IAEAREHGDL ENAEY AARE+Q F EGRIK Sbjct: 5 FPITAKGFKKLEHELKHLKHVERKKISEDIAEAREHGDLSENAEYEAAREKQAFIEGRIK 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++E + A++ID++K+ + + FGATVT+++ D++E+ TY +VG+ EAD + +S+ Sbjct: 65 ELEDMAARAEIIDISKLSGDN-IKFGATVTLIDDDTEEKVTYIVVGEYEADITRKRVSIA 123 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SPIA+ LIGK D V + TP G +EV++VEY Sbjct: 124 SPIAKALIGKSVGDFVEVTTPKGSKSYEVVEVEY 157 >UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae RepID=GREA_DESVH Length = 163 Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 74/158 (46%), Positives = 112/158 (70%), Gaps = 2/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +IP+++ G ++L +ELD LK RP +I AI EARE GDL ENA Y AARE+QG E Sbjct: 1 MSSIPISVEGFKQLEKELDRLKK-ERPGVIQAIKEAREEGDLSENAGYDAARERQGMLEA 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK IE++++ VID+ + + +V+FGATV + +L+S EE+ Y ++G DEAD+ + I Sbjct: 60 RIKYIESRMAQFNVIDLDTISGD-KVMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 SV SP+AR ++GKEE D +V+ P G++ +E++ + +L Sbjct: 119 SVQSPVARAMLGKEEGDEIVVDAPRGKIHYEIVSIRFL 156 >UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales RepID=B9KH08_ANAMF Length = 174 Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/160 (48%), Positives = 114/160 (71%), Gaps = 7/160 (4%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 P+T RG +KL EL+ LKS RP+II +I++ARE GDL ENAEYHAARE+QG E +I Sbjct: 17 FPITRRGFQKLEAELEALKS-ERPKIIKSISDARELGDLSENAEYHAARERQGLVESKIM 75 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQT----YRIVGDDEADFKQNL 119 ++E+K S A+VIDV+++ + V+FGATVTV D + T Y+IVG+ EAD +N+ Sbjct: 76 ELESKRSRAEVIDVSELSGD-TVMFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKNM 134 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVE-FEVIKVEYL 158 IS+ SP+ L+G+ E D V +KTP G+ + ++++K+E++ Sbjct: 135 ISIKSPLVLSLLGRREGDSVEVKTPRGDYKIYQIMKIEFV 174 >UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKY5_HALO1 Length = 169 Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/155 (49%), Positives = 103/155 (66%), Gaps = 1/155 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 PMT G ++ +L LK V RP AI AR HGDL ENA+Y AA+E+QG E RI+ Sbjct: 5 FPMTPSGHAWMKAQLKKLKEVDRPANAKAIEVARGHGDLSENADYDAAKEEQGMIEARIR 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 + EAKL+ ++VID TK+ + RV FGATVTV ++D+ +E TY IVG+ EAD K ISV Sbjct: 65 EYEAKLALSEVIDPTKL-SGERVKFGATVTVEDIDTGDEATYTIVGEHEADIKNKRISVT 123 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 +P+AR LIGK D ++TP G FE++ V++L Sbjct: 124 APVARALIGKAIGDETQVQTPKGTRAFEIVDVKWL 158 >UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT Length = 160 Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 79/157 (50%), Positives = 110/157 (70%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +PMT G EKL+EEL+ LK RP+ I IAEAR HGDL ENAEYHAA+E+QGF Sbjct: 1 MNQVPMTKAGYEKLKEELEKLKHEERPKNIQDIAEARAHGDLSENAEYHAAKERQGFINS 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK++EAK+++A V+ + ++ R+ FGATV ++ LDS EE+ Y +VG +EAD K I Sbjct: 61 RIKELEAKIASAIVVS-SAHQDHSRITFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV+SP+ + LIG E + V I+ P GEV++ + ++ Y Sbjct: 120 SVHSPVGKALIGHSEGETVTIRVPAGEVQYTIAEIFY 156 >UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia RepID=GREA_NEOSM Length = 159 Score = 140 bits (354), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 71/157 (45%), Positives = 111/157 (70%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ +P+T G KL+EEL+ L V +P ++AA+A+ARE GDL ENAEYH AR++Q F EG Sbjct: 1 MRKLPITREGYCKLQEELEKLVKVVKPSVVAAVAQARELGDLSENAEYHEARKEQSFVEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +I++++ LS A+VIDV++ RV FGA+VT+ N++S Y+IVG+ E+D K+ I Sbjct: 61 KIRELQLCLSEAEVIDVSQFTGE-RVKFGASVTLENMESKSVLIYQIVGNLESDIKEGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV+SPI + ++ KE ++V I P G+ ++++ VE+ Sbjct: 120 SVSSPIGKAVMNKEVGEIVEIDLPSGKKTYKILGVEF 156 >UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria RepID=GREA_SPHWW Length = 158 Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/158 (50%), Positives = 106/158 (67%), Gaps = 3/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ +PM G + L EEL LK+ RP II AI EAR HGDL ENAEYHAA+E+QG E Sbjct: 4 IEKLPMLAEGQKMLTEELARLKA-ERPLIIDAIEEARAHGDLSENAEYHAAKERQGQIEA 62 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 I DIE +LS AQVID + M + +++FGATVT+L+ D ++ Y+IVG EAD K I Sbjct: 63 SIADIEDRLSRAQVIDPS-MLSGDKIVFGATVTLLD-DDEKPVRYQIVGQTEADAKTGKI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S NSP+ R LIGK+ DD V + P G+ + V K+E++ Sbjct: 121 SYNSPLGRALIGKKVDDEVEVTVPSGDRFYLVSKIEFI 158 >UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate division OP8 bacterium RepID=Q2Z001_9BACT Length = 156 Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 72/157 (45%), Positives = 104/157 (66%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ P+T G +KL EL L+ V RP + AI EAR HGDL+ENA++ A+++Q G Sbjct: 1 MERYPITPEGLKKLEAELKRLREVDRPANVKAIEEARGHGDLRENADFKCAKDEQAMIVG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ ++S+A VID +K+ N RV+FGA V + NLD+ E YR+VG+DEAD +Q I Sbjct: 61 RIAYLQGRISHAAVIDPSKLSGN-RVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S+ SP+ARGLI +E + I P G FE++K+E+ Sbjct: 120 SITSPLARGLIRREVGEQAKIAVPSGIKSFEIVKIEF 156 >UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HT85_CAMUP Length = 161 Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 71/157 (45%), Positives = 101/157 (64%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ M+ G EKL EL LK +RP ++ I AR HGDLKENAEYHAARE+Q E Sbjct: 1 MEKEAMSSFGFEKLSAELKDLKDNQRPAVVVEIDVARSHGDLKENAEYHAAREKQALIES 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ LS AQVID + V FG++V +++L+S++E Y +VG E+D ++ I Sbjct: 61 RIAELGGILSRAQVIDPASYEHES-VKFGSSVLIMDLESEKESKYTLVGTCESDLEKGYI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S+ SP+AR ++GK+E D ++ P GE EFE++ V Y Sbjct: 120 SIASPLARAMLGKKEGDEFKVRLPKGESEFEILSVTY 156 >UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria RepID=GREA_LISW6 Length = 160 Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 72/154 (46%), Positives = 100/154 (64%), Gaps = 1/154 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMTL G KL EL LK+V+R E++ I AR GDL EN+EY +A+++Q F EGR Sbjct: 5 KVFPMTLEGKAKLENELQELKTVKRKEVVERIKIARSFGDLSENSEYDSAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I IE + NAQ+ID + +NG V G TVT + L EE+TY IVG EAD + IS Sbjct: 65 ITTIENMIRNAQIIDAAE-AHNGLVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +SPIA+GL+G +E + V I+TP G++ ++ K+ Sbjct: 124 NDSPIAKGLLGHKEGEEVTIQTPAGDMNVKIEKI 157 >UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R891_9PLAN Length = 164 Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 1/154 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 IPMT G KL+ ELD +++V P+I IA+AR GDLKENAEYHA RE QG + +I Sbjct: 5 IPMTREGYAKLKAELDRMENVDMPDITQKIADARAEGDLKENAEYHAQREAQGLLQAKIN 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 I KLS A +ID + MP + +V FG TV V ++D DEE+ + +VG E D+ I + Sbjct: 65 LIRNKLSKASIIDPSTMPRD-QVSFGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILIT 123 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+ + L+GK+ DVV + P G + E++ +++ Sbjct: 124 SPLGQALVGKKIGDVVDVPAPKGSYQLEILTLKF 157 >UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKN0_DESAH Length = 175 Score = 131 bits (329), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 1/155 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 + IP+T+ G L+EEL LK++ RP+ I AI AR HGDL ENAE+ AA+++Q F EG Sbjct: 21 LDQIPITIEGYAALKEELQRLKTIERPQNIKAIEIARAHGDLSENAEFDAAKDRQSFIEG 80 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ K+++A++ID + + V F + V + NLDS EE Y IVG +E+D + I Sbjct: 81 RIGELGYKIASAKIIDPATVSKDC-VRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKI 139 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SV+SP+ L+GK+ D +VI+ PGG+ +E++ + Sbjct: 140 SVSSPLGMALLGKQPGDEIVIQAPGGKRNYEIVDI 174 >UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=GREA_SYNFM Length = 156 Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/155 (43%), Positives = 102/155 (65%), Gaps = 1/155 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +P+T G E+L+ EL L+ RP +I AI EAR HGD+ ENAEY AA+E+Q EG Sbjct: 1 MPRVPITKEGFERLKIELQRLQRDERPMVIRAIEEARSHGDISENAEYEAAKEKQAMIEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI+D+ K+ ++++ + +NGR IFG+TV V + ++ E +YR+VG EAD + I Sbjct: 61 RIQDLCQKMGECEIVEPSDN-DNGRAIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SV SP+ + LIGKEE + + ++TP G EV+++ Sbjct: 120 SVVSPLGKALIGKEEGEEIRVQTPKGVRNIEVLEI 154 >UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae RepID=D1B0C0_SULD5 Length = 167 Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/153 (43%), Positives = 103/153 (67%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 PMT G +KL +EL LK +RPE + + AR HGDLKENAEYHAA+E+ F + RI + Sbjct: 6 PMTEYGYKKLTDELSDLKKRQRPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSRIAE 65 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +S +QVID + ++ +V FG+T+T+ NL+++EE TY IVG E++ LIS +S Sbjct: 66 LSDLVSRSQVIDPSTYEHD-KVRFGSTITLENLETNEEVTYSIVGSTESNPDLGLISYHS 124 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+++ L+G+ D+ V+IK P G E+ ++ + Y Sbjct: 125 PLSKQLMGRCVDEEVMIKLPVGTQEYAILNITY 157 >UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus aciditrophicus SB RepID=GREA_SYNAS Length = 161 Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/155 (43%), Positives = 101/155 (65%), Gaps = 1/155 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ +P+T G E L++EL+ LK V P I I AR HGDL ENAEY AA+E+Q F G Sbjct: 1 MEKMPITKSGFENLKKELEHLKCVLIPANIKDIEIARAHGDLSENAEYTAAKEKQSFLHG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +++++E L+ + VID+ KM ++ R++FGATV + + ++ Y++VG E++ +N I Sbjct: 61 KLQELENNLALSNVIDL-KMLSDDRIVFGATVIIEEASTGKQTNYQLVGPFESNISENKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SV SPI + LIGK D V + TPGG FEV+ + Sbjct: 120 SVTSPIGKALIGKSIGDEVKVHTPGGIRNFEVVDI 154 >UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae RepID=GREA_RHOBA Length = 159 Score = 127 bits (320), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 103/157 (65%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++++PMT G K++ E++ +++ P I+ IAEARE GDLKENAEYHA RE QG Sbjct: 2 VESVPMTREGYNKIKAEINRMENEEMPMIVQKIAEAREEGDLKENAEYHAQRENQGMLMA 61 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +I ++ K++ A +IDV+ +P + V+FG TVTV ++ +E+ + +VG + D+ I Sbjct: 62 KINELRDKIARASIIDVSSLPKD-EVVFGCTVTVEDVAYGDEEQFTLVGAGDEDYDSGKI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V SP +GL+GK+ + + P G+++F+++K+E+ Sbjct: 121 LVTSPFGQGLVGKKVGETAEVDVPAGKLKFKILKIEF 157 >UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C498C Length = 161 Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/152 (42%), Positives = 98/152 (64%), Gaps = 1/152 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 IPMT G +KL+ ELD L+ EI +A AR+ GDL ENAEYHAARE QG + RI Sbjct: 6 IPMTREGYDKLKVELDRLRGAEMIEITKRVAAARDLGDLSENAEYHAAREDQGILQARID 65 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 + +LS A ++D + +P + V FG+ V VL++D DEE+T+ +V + + + I Sbjct: 66 ALSDRLSRAVIVDTSNLPKD-TVAFGSKVRVLDVDVDEEETFELVSPGQENPDKGRILTG 124 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SPI +GLIG+++ D V I+ P G ++F+++++ Sbjct: 125 SPIGQGLIGRKKGDTVEIQVPSGTIKFKILEI 156 >UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms RepID=GREA_BACCR Length = 158 Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/155 (44%), Positives = 98/155 (63%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMT G +KL EL+ LK+VRR E++ I AR GDL EN+EY AA+++Q F EGR Sbjct: 5 KTYPMTQEGKQKLENELEQLKTVRRKEVVERIKIARSFGDLSENSEYDAAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E + NA +I T + V G TVT L + +E+ Y IVG EAD + IS Sbjct: 65 ITQLENMIRNAVIIKDTGEVST-VVTLGKTVTFKELPNGDEEAYTIVGSAEADPFEGRIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +SPIA+ L+GK+ + V I+TPGGE++ E++ V+ Sbjct: 124 NDSPIAKSLLGKQIGEKVTIQTPGGEMQVEIVSVK 158 >UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes RepID=GREA_FLAPJ Length = 158 Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 97/149 (65%), Gaps = 1/149 (0%) Query: 7 TLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIE 66 T G +KL++EL+ LK++ RP+ A IAEAR+ GDL ENAEY AA+E QG E +IK +E Sbjct: 8 TAEGLKKLKDELEQLKAIERPKASADIAEARDKGDLSENAEYDAAKEAQGLLELKIKKME 67 Query: 67 AKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPI 126 SNA++ID +++ + ++ + V + N + E +Y +V + EAD K ISV SPI Sbjct: 68 EVYSNARLIDESQLDVSKALVL-SHVKIKNQSNGMEMSYHLVAESEADLKTGKISVTSPI 126 Query: 127 ARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +GL+GK ++ I P G ++FEV+++ Sbjct: 127 GKGLLGKSVGEIAEITVPNGILKFEVLEI 155 >UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria RepID=Q01RT9_SOLUE Length = 164 Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 93/144 (64%), Gaps = 1/144 (0%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 +KL++E+ L+ ++ I +AR HGDLKENAEYHAA+++QGF R+ ++++L Sbjct: 6 KKLQDEITALEYELHVDLPKEILKARLHGDLKENAEYHAAKDRQGFVSARLGQLKSRLGQ 65 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI 131 +ID TK+P + + G+TV VL++ SD+E TY +V +EAD +S SPI R L+ Sbjct: 66 LAMIDFTKIPRD-KAGLGSTVVVLDVKSDQEITYHLVTSEEADAPNGKVSTTSPIGRALL 124 Query: 132 GKEEDDVVVIKTPGGEVEFEVIKV 155 GK D V + +PGG E E++K+ Sbjct: 125 GKTVGDEVKVMSPGGVKELEILKL 148 >UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria RepID=D0J9T5_BLASP Length = 162 Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 64/153 (41%), Positives = 100/153 (65%), Gaps = 2/153 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +KL++E++ L+++ RP+I IAEAR+ GDL ENAEY A +E Q F E I + Sbjct: 9 ITKEGLKKLQQEIERLENIERPKISMQIAEARDKGDLSENAEYDAIKEAQEFLEMNIAKL 68 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + KLSNA++ID +++ N RV +TV V NL EQ Y +V + EAD K IS+N+P Sbjct: 69 KKKLSNARIIDGSQI-NRTRVSILSTVRVKNLTYGGEQIYTLVPEGEADLKSGKISINTP 127 Query: 126 IARGLIGKEEDDVVVIKTPGGEV-EFEVIKVEY 157 I+ GL+GK+ + IK P + ++E++++ + Sbjct: 128 ISTGLLGKQVGQIAHIKLPNKMILDYEILEIAF 160 >UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae RepID=D1B632_THEAS Length = 164 Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 91/143 (63%), Gaps = 1/143 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + MT G EKL++EL L+ R EI + + EAR GDL ENAEYHAA+E+Q E RI Sbjct: 11 VIMTREGYEKLKQELASLRGDGRSEIASKLEEARAFGDLSENAEYHAAKEEQEKLESRIM 70 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +E +LS A+V++ + + + V GATV + +LD+ TY +VG +EAD K N IS Sbjct: 71 WLEYQLSKAKVVESSDI-DTSTVSLGATVQLRDLDTGNTYTYVLVGSEEADPKANRISAQ 129 Query: 124 SPIARGLIGKEEDDVVVIKTPGG 146 SP+ + +IG+ E + V+++ P G Sbjct: 130 SPVGKAIIGRAEGEEVIVRVPKG 152 >UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2N3_SALRD Length = 164 Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 87/132 (65%), Gaps = 1/132 (0%) Query: 21 LKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKM 80 LK+ R I IAEAR GDL ENAEY AA+E+QG E RIK IE ++ A+++D + + Sbjct: 29 LKTEERSRIADEIAEARAKGDLSENAEYDAAKEEQGKLEARIKQIEDTIARARIVDESTV 88 Query: 81 PNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVV 140 ++ I + VTV NLD+ +EQT+ +V ++EA+ +N ISV+SPI GL+ +EE D V Sbjct: 89 DDSKAYIL-SDVTVENLDTGDEQTFTLVSEEEANISENKISVDSPIGEGLLAQEEGDEVS 147 Query: 141 IKTPGGEVEFEV 152 I P G V F++ Sbjct: 148 IDVPAGTVHFKI 159 >UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira RepID=C0QWD9_BRAHW Length = 154 Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/153 (42%), Positives = 96/153 (62%), Gaps = 2/153 (1%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 A P+T G +K + +L LK+ + A IAEARE GDLKENAEYHAA+E+QG +I Sbjct: 2 AKPITKEGYDKAKSKLADLKA-EFETLPAIIAEAREKGDLKENAEYHAAKEKQGLLNAQI 60 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 +E+ L+ ++ID + + V FG V V + + YRIVG+ EAD +N I++ Sbjct: 61 SKLESDLAGCEIIDPANL-DKDTVTFGKRVKVKDKSRNAVFEYRIVGELEADMSKNEITI 119 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +PIA+GL+GK+ DVV IK P G+ E++++ Sbjct: 120 VTPIAKGLLGKKIGDVVTIKVPAGDKVLEILEI 152 >UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria RepID=GREB_PSEAE Length = 168 Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 2/152 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T GA +LR EL L VRRP++ A++EA GD ENAEY ++ + R++ + Sbjct: 15 ITPEGAARLRAELHELWHVRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRVRFL 74 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L N +V+ + + RV FGA VT+ + D E+ YRIVG DE D + N IS++SP Sbjct: 75 RKRLENLKVVG-ERPADPNRVYFGAWVTLEDEDG-EQARYRIVGPDELDLRNNQISIDSP 132 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR L+GKE D V+++TP GE + V+++EY Sbjct: 133 LARALVGKELDAEVLVRTPAGEKLWFVVEIEY 164 >UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales RepID=Q67JL1_SYMTH Length = 157 Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/153 (38%), Positives = 96/153 (62%), Gaps = 1/153 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + ++L G ++L +EL +L++V+R E+ I +ARE+GD+ EN+EY A+ +Q F EGRI Sbjct: 6 VLLSLDGLKQLEQELLYLRTVKRMEVAERIKQAREYGDISENSEYEDAKNEQAFIEGRIL 65 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +E L NA+VID + V+ G+TV + +L+ +E TY IVG EAD N IS Sbjct: 66 VLEKMLRNARVID-EPVGQQEVVVLGSTVVLRDLEYGDEHTYTIVGTTEADPAHNRISNE 124 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ R ++G+ VV + P G ++E++ ++ Sbjct: 125 SPVGRAIMGQRVGTVVAVDAPDGVFKYEIVAIK 157 >UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria RepID=GREA_CHLCH Length = 160 Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/153 (43%), Positives = 93/153 (60%), Gaps = 2/153 (1%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 I +T G +L+EEL L R E++ IAEAR HGDL ENAEY AARE+Q E RI Sbjct: 5 IYLTNDGYNRLKEELYVLVHQTRKEVLEKIAEARAHGDLSENAEYDAAREEQSQIEARIG 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDS-DEEQTYRIVGDDEADFKQNLISV 122 D+E+KLS A ++D ++ + +V +V + NLD+ DE Y +V +EAD ISV Sbjct: 65 DLESKLSAATILDPKQIKTD-KVYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKISV 123 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+ R LIGK V I P GE+ +E++++ Sbjct: 124 RSPVGRSLIGKTVGAKVTIVVPKGELHYEILEI 156 >UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=GREA_THERP Length = 156 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 2/153 (1%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 IP+T G E LR+E ++L RRPEI I EAREHGD++ENA Y AA+ Q F EGRI+ Sbjct: 6 IPITREGLEALRQEYEYLVKHRRPEIARVIQEAREHGDIRENAAYDAAKHDQAFIEGRIR 65 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +IE L ++I+ + V G+TVT+ +D + E TY IVG EA IS Sbjct: 66 EIEELLKRVELIEQPTDGDRSVVRVGSTVTI-EIDGEIE-TYTIVGAIEAKPSAGRISNE 123 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ R L+G ++V I+TP G + +I+V+ Sbjct: 124 SPVGRALLGHRAGEIVPIETPNGTLMARIIEVQ 156 >UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia RepID=GREA_CLOB8 Length = 160 Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 1/150 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G +KL EL++LK+V+R EI I A +GDL EN+EY A+ Q F EGRI + Sbjct: 9 MTYEGVKKLESELEYLKTVKRKEITEKIKIALGYGDLSENSEYDEAKNDQAFTEGRIIQL 68 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E L NA V+D +++P++ V G+ V V + + DEE Y IVG EAD IS SP Sbjct: 69 ENMLKNAVVVDESEIPSD-IVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKISNESP 127 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 + L+GK+ DVV + P G +FE++ + Sbjct: 128 VGNALVGKKVGDVVEVTVPDGVNKFEILGI 157 >UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AU03_RUBXD Length = 154 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 89/151 (58%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G KL+EEL +L VRR E+ I +ARE GD+ EN+EY A+ +QG E RI ++ Sbjct: 1 MTPEGFAKLQEELKYLTEVRRKEVAERIRQAREFGDISENSEYDDAKNEQGLLERRISEL 60 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + +L NA+++D G V G VT+ + E+T++IVG +EAD +S SP Sbjct: 61 QRRLRNAKIVDPASSAEEGAVDLGTRVTLRVVGDGRERTFQIVGANEADPASGKLSHASP 120 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + + L+ + + V + TP G E+E++ VE Sbjct: 121 VGKALLRRRVGEKVRVSTPRGATEYEIVSVE 151 >UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales RepID=GREA_DESMR Length = 164 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 101/157 (64%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M++IP+++ G +L EL+ RP +I AI EARE GDL+ENA Y AARE+QG E Sbjct: 1 MESIPISVEGFRRLERELE-RLKKERPGVILAIKEAREEGDLRENAGYEAARERQGMLEA 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI IE+++S VID+ + +VIFGATV + ++D+ + + Y ++G DEA+ + I Sbjct: 60 RINYIESRMSRFNVIDLATLGGE-QVIFGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S+ SP+ L+GK D +V+ P G++ +E++ + + Sbjct: 119 SLLSPVGLALLGKFVGDEIVVDAPRGKINYEIVSIAF 155 >UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales RepID=GREA_CLOAB Length = 158 Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 1/150 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +G +KL EEL++LK+ +R EI I A GDL EN+EY A+ Q F EGRI I Sbjct: 9 ITYKGVKKLEEELEYLKTTKRKEITEKIKVALSFGDLSENSEYDEAKNDQAFVEGRIAQI 68 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E L NA VID +++ N+ V G+ V V + DEE + IVG EAD +N IS SP Sbjct: 69 ENMLKNANVIDESELKND-VVSVGSKVMVKDYQFDEEIEFSIVGSAEADPIENKISNESP 127 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 + LIGK+ D + + P G +++++ + Sbjct: 128 VGSALIGKKVGDEIEVNVPDGVDKYKILAI 157 >UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes RepID=GREA_STRPG Length = 160 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/152 (44%), Positives = 94/152 (61%), Gaps = 1/152 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 PMTL E+L +EL+ LK VRRPEI+ I AR +GDL EN+EY AA+++Q F EG+I Sbjct: 7 PMTLTEKEQLEKELEELKLVRRPEIVERIKIARSYGDLSENSEYDAAKDEQAFVEGQIST 66 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +E K+ A++ID + + V G TV V + + ++ TY IVG AD IS S Sbjct: 67 LETKIRYAEIIDSDAVAKD-EVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKISNES 125 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 PIA+ LIGK+ D V I++P + E+I VE Sbjct: 126 PIAQALIGKKTGDKVRIESPAATYDVEIISVE 157 >UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria RepID=Q1H0G6_METFK Length = 165 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 91/152 (59%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +L++E + L V RP++++ +A A +GD EN +Y +++ + R++ + Sbjct: 8 ITPEGYARLKDEFEQLYKVERPKVVSDVAWAASNGDRSENGDYIYGKKRLRQIDSRLRFL 67 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 ++ A V+D + + ++ FGA V + ++D D E YRIVG DE D + IS SP Sbjct: 68 MKRMDIAVVVDPAQQQDLEKIYFGAWVELYSIDKDSEHHYRIVGQDELDPGKGYISWISP 127 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR L+GK+ DV+ ++TP GE FE++ V Y Sbjct: 128 LARALLGKQPGDVIRVETPAGEERFEIVDVSY 159 >UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZBG3_PLALI Length = 160 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/160 (40%), Positives = 100/160 (62%), Gaps = 3/160 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ P++ G +KL+EE+ L+ P+I AIAEAR GDLKENAEYH RE+QG + Sbjct: 1 MELQPISREGYDKLKEEIRKLEHDDMPKIAEAIAEARAEGDLKENAEYHGQREEQGRLQA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI +++KL++ ++D + +P G V FG VTV N D + + Y VG E D+ +++ Sbjct: 61 RINSLKSKLASCYIVDKSTLP-KGVVAFGTRVTVKNTDDGDIEKYEFVGPGEEDYMSDVM 119 Query: 121 SV--NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 + SP+A L+GK+ +D V I+ P G + +E+ ++E L Sbjct: 120 KILTTSPLASALLGKKVNDKVSIQVPRGTINYEITEIEEL 159 >UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli RepID=GREA_STRP2 Length = 160 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/152 (43%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 PMTL EKL +EL+ LK VRRPE++ I AR +GDL EN+EY AA+++Q F EG+I Sbjct: 7 PMTLEEKEKLEKELEELKLVRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQISS 66 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +E K+ A++++ + + V G TVT+ + DEE+ Y IVG AD +S S Sbjct: 67 LETKIRYAEIVNSDAVAQD-EVAIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGKVSNES 125 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 PI + LIGK+ D I+TP G + +++KVE Sbjct: 126 PIGQALIGKKTGDTATIETPVGSYDVKILKVE 157 >UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427C8 Length = 151 Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/151 (43%), Positives = 94/151 (62%), Gaps = 6/151 (3%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +L++EL+ LK RR EI IAEAR++GDL ENAEY AARE+QG E RI +I Sbjct: 7 ITEAGKNELKDELETLKG-RRGEIAEKIAEARDYGDLSENAEYDAAREEQGIVETRIAEI 65 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E L NA +I +G+V G+ V ++ + Y +VG EAD + +S SP Sbjct: 66 ENILQNAAII---TGGVSGQVGLGSVVELMT--GSKTAVYTVVGPVEADPLEGKVSNESP 120 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 I L+GK+ DD+V I TP G++E+++I ++ Sbjct: 121 IGAALMGKKVDDIVEINTPKGKLEYKIISIK 151 >UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class) RepID=GREA_CHLAA Length = 157 Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 1/150 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +L EL++L +V R +I IA A+E GD+ E+ EY A++ Q EGRI+++ Sbjct: 8 LTREGRARLEAELEYLTTVERKQIAERIAAAKELGDISESGEYEDAKKAQALLEGRIREL 67 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + LS A+VID +NG V G++VTV D E+T+ IVG EA+ +Q IS SP Sbjct: 68 KHLLSRAEVID-EDQASNGEVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRISNESP 126 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 + L+GK + V + TP G ++ ++KV Sbjct: 127 LGAALLGKRARNKVTVHTPSGVMKLTILKV 156 >UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9R4_ACIC5 Length = 165 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 88/144 (61%), Gaps = 1/144 (0%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 +KL E++ L+ E+ A I +A GDL ENAEYH A+++Q F R+ ++ +++ Sbjct: 7 KKLLEDIKQLEHELAHELPAEIKKAAALGDLSENAEYHMAKQRQEFVNARLGQLKKRMAE 66 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI 131 ++++ +P++ RV FG+TV V + DE+ Y++V +E+D + LIS SPI R LI Sbjct: 67 LSLVNLANIPHD-RVAFGSTVEVFDTSKDEKIEYKLVTSEESDVSKGLISTTSPIGRALI 125 Query: 132 GKEEDDVVVIKTPGGEVEFEVIKV 155 GK+ D + TP G E EV+K+ Sbjct: 126 GKQVGDTATVVTPSGNRELEVLKL 149 >UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes RepID=GREA_LEUCK Length = 160 Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 8/159 (5%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMT G +KL+ EL+ L + +RPEI I AR +GDL EN+EY +A+++Q F EGR Sbjct: 5 KVFPMTAEGRDKLQAELEDLITRQRPEITNRIQIARSYGDLSENSEYQSAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGR---VIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN 118 I ++ + NA++ID PN V G TVT L +E +TY IVG E+D Sbjct: 65 ILTLKKMIENAEIID----PNATAADVVSLGKTVTFKELPDEEPETYAIVGSTESDPLAG 120 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 IS S +A L+ K+ D V + P GE ++ E++KVE Sbjct: 121 KISNESAMAVALLDKKVGDKVSVPLPSGESIDVEILKVE 159 >UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales RepID=A8SDG2_9FIRM Length = 161 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q I M+ G + ++EEL++LK+VRR E+ I EAR HGDL EN+EY A+ QG E R Sbjct: 3 QEIKMSAAGLKAMQEELEYLKTVRRKELAEEIKEARSHGDLSENSEYDEAKNTQGLVENR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E + NA +ID +++ + V G VT+ DE + Y IVG EAD IS Sbjct: 63 ITELEQTIKNAVIIDESELSVD-NVSVGTHVTIRETGEDEAEEYDIVGRTEADAFNGKIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 SP+ L+GK D + P G+ V + V+ + + Sbjct: 122 DESPVGHALMGKAVGDKAEVLLPTGQTVVYTVLAITH 158 >UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes RepID=C4Z9L9_EUBR3 Length = 185 Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 98/151 (64%), Gaps = 1/151 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +KL +EL+ LK V+R E+ I EARE GDL ENAEY AA+++Q E RI++I Sbjct: 31 LTYAGLKKLEDELEQLKVVKRKEVSQKIKEAREQGDLSENAEYDAAKDEQRDIEARIEEI 90 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E L NA+V+ V + + ++ G + +L+ + DEE Y+IVG EA+ + IS SP Sbjct: 91 EKILKNAEVV-VEEEVDLDKISIGCKIRILDCEFDEELEYKIVGSTEANSLKGKISNESP 149 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + + L+GK+ D V ++T GE+ ++V++++ Sbjct: 150 VGKALLGKKVGDTVTVETQVGELTYKVLEIQ 180 >UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6T4_SPHTD Length = 157 Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/155 (45%), Positives = 94/155 (60%), Gaps = 6/155 (3%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 IP+T G + L++ELD L + RR EI A+ ARE GDL+ENA Y AA+ Q F EGRI+ Sbjct: 6 IPITKEGLKALQDELDDLVNRRRVEIAQALQAAREEGDLRENAGYDAAKHDQAFIEGRIR 65 Query: 64 DIEAKLSNAQVIDVTKMPN-NGRVI-FGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 +IE L A+VID + PN + RV+ G+TVT+ +D +E TY IVG EA IS Sbjct: 66 EIEDILRRAEVID--EAPNGDARVVRLGSTVTI-EIDGAQE-TYTIVGAVEAKPAAGRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP R L+G E + V I+TP + ++ VE Sbjct: 122 NESPFGRALLGHREGEEVEIQTPAAVLHARIVNVE 156 >UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mollicutes RepID=GREA_MYCCT Length = 157 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/139 (43%), Positives = 85/139 (61%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 I +T G E+L+ EL L V RP++I + EAR GDL ENA+Y AAR +Q E RIK Sbjct: 5 IILTQEGLEELKAELKNLLEVTRPKVIEELVEARNQGDLSENADYDAARNRQAEVEARIK 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++E ++ A+VID +K + G V G+TV L+ + + +IVG EAD LIS Sbjct: 65 EVETLINRAKVIDNSKTHSTGEVKIGSTVEFLSSLDHKTKEIKIVGAIEADPFSRLISNE 124 Query: 124 SPIARGLIGKEEDDVVVIK 142 SPIA+ ++GK+ D V IK Sbjct: 125 SPIAKAILGKKIGDTVEIK 143 >UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCPU Length = 157 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/141 (43%), Positives = 86/141 (60%), Gaps = 3/141 (2%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 I +T +K EE L +V RP +I I EAR+ GDL ENAEY AARE+QG E RI Sbjct: 7 IYLTQETIKKYEEEKWHLINVERPAVILEIKEARQQGDLSENAEYDAAREKQGQIEDRIT 66 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++E LSNA I + ++ ++ G+ V +LN + +E+T++IVG + D QN IS Sbjct: 67 ELENILSNAISI---QESHSDKIGLGSVVRILNQSTGKERTFKIVGSFDTDPTQNKISYE 123 Query: 124 SPIARGLIGKEEDDVVVIKTP 144 SP+A+ +IG + DVV I P Sbjct: 124 SPLAKSIIGFSKGDVVEIDAP 144 >UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli RepID=GREA_OENOB Length = 162 Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 86/152 (56%), Gaps = 2/152 (1%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 PMT G KL+ ELD L + +RP I + I EAR GDL EN+EY +A+++Q F EGR+K Sbjct: 8 PMTAEGLAKLQAELDDLITNKRPAITSRIQEARSFGDLSENSEYQSAKDEQAFVEGRVKQ 67 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++ + AQVID + N V G ++ + +E+TY IVG E+D IS +S Sbjct: 68 LQQMIQFAQVIDASSASKN-VVTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKISNDS 126 Query: 125 PIARGLIGKEEDDVVVIKTP-GGEVEFEVIKV 155 P+ + L+ + D V I P V E++ V Sbjct: 127 PMGKALLDHKTGDKVEIPLPENHSVTVEILHV 158 >UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD0_FIBSS Length = 151 Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 3/149 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG-RIKD 64 T +KL ++L+ LK+V RP ++ + +AR GDL ENAEYHAA+E+ + + Sbjct: 2 FTQEAYDKLVKDLENLKNVERPRVLQELVDARAQGDLSENAEYHAAKERLASIDNIEMPK 61 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++ +L+ AQVI N+ + FGAT+T NL + E Y++V +EAD IS S Sbjct: 62 LQDQLARAQVIAFD--ANSDTIKFGATITAKNLKTKREIVYQLVSPEEADALNGKISFKS 119 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVI 153 PI L+GK+ D V + TP G+ +FE+I Sbjct: 120 PIGAALMGKKRGDTVEVVTPKGKNQFEII 148 >UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ19_9FIRM Length = 156 Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 93/153 (60%), Gaps = 3/153 (1%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + +T G KL E+L++LKSV+R EI + A GDL EN+EY A+ +Q F EG I+ Sbjct: 6 VMLTEEGYNKLVEKLNYLKSVKRIEIAQRLKAAIALGDLSENSEYDDAKNEQAFLEGEIQ 65 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 D+ AK+ N+ +I K V G+ VTV +++ +E+T+ +VG EAD + IS Sbjct: 66 DLTAKIRNSHII---KAGAGDVVQMGSKVTVKDIEFGDEETFMLVGSTEADPDEGKISNE 122 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ + L+G++ V+ + P G +++E++ ++ Sbjct: 123 SPLGQALLGQKSGSVIDVHAPAGIIKYEILDIK 155 >UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus RepID=Q1J0L4_DEIGD Length = 156 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 62/154 (40%), Positives = 87/154 (56%), Gaps = 4/154 (2%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 IPMT RG +KLRE L++LK+ RR +I + A GDL+E+A Y AR QQ E RI Sbjct: 6 IPMTKRGYDKLRETLEYLKTTRREQISEYMGSAIADGDLRESAAYDEARMQQSENEARIL 65 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++E +L AQ+I+ G GA V V + +E Q + +VG E D + IS Sbjct: 66 ELEDQLERAQIIEEDASGGAG---LGAKVKVRDEKGNERQ-FELVGTYEVDVLKGKISDA 121 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SPI + L GK +V ++ P G +FEV++V Y Sbjct: 122 SPIGQALSGKRPGQIVTVQLPKGSAKFEVLEVTY 155 >UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEW3_9BACT Length = 154 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 88/151 (58%), Gaps = 1/151 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 M+ G ++L EL + +V P + AIAEAR+ GDL EN EYHAA+ +QG RI Sbjct: 4 MSQEGYDELVAELQHMVNVELPAVRDAIAEARDKGDLSENFEYHAAKREQGKLLSRISFK 63 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + L NA+VID +++ ++ V + + + NL + Y IV EAD IS+ SP Sbjct: 64 QKVLENARVIDKSRLKSD-TVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKSP 122 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IA+ L+GK+ + V++K P G ++F + VE Sbjct: 123 IAKALLGKKAGEEVMVKVPAGLLKFRLDSVE 153 >UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria RepID=GREB_YERPE Length = 171 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 90/152 (59%), Gaps = 2/152 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G + L EL +L RP + A++EA GD ENAEY +++ + R++ + Sbjct: 7 ITREGWQALDRELHYLWREERPVVTQAVSEAAAMGDRSENAEYIYGKKRLREIDRRVRFL 66 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L +++D G+V FGA V V N + +E++ +R+VG DE D + IS++SP Sbjct: 67 AKRLEVLKIVDPDPR-QEGKVFFGAWVRVEN-EQEEQRIFRLVGPDEFDPAKKWISIDSP 124 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR LIGK+ DD V ++TP GE + ++++ Y Sbjct: 125 VARALIGKQVDDEVTVQTPNGEATYWILEIRY 156 >UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBD2_ELUMP Length = 156 Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 99/157 (63%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ ++ + EKLRE+L LK ++ ++ I EA + GDL+ENAEY AA+ +Q Sbjct: 1 MEKYYLSRKNYEKLREDLTALKEIK-AKLSLEIGEAAQQGDLRENAEYAAAKSRQEETLV 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +I+D+E KL NAQ+ D ++ + GATVTV ++ +D + TY +VG E++ ++ L+ Sbjct: 60 KIQDLEQKLRNAQITDDIQV-DKSEARIGATVTVHDISADIDFTYTLVGSMESNPEKGLL 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV SP+A ++GK+E + P G+ ++++K+EY Sbjct: 119 SVQSPLAVSILGKKEGEEFEAVLPKGKKMYKLVKLEY 155 >UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Gammaproteobacteria RepID=GREB_PSEPK Length = 162 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 87/157 (55%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +T G E L++ELD L V RPEI +A A GD ENA+Y ++ + Sbjct: 1 MSTNIITTEGHEALKKELDHLWRVYRPEITQKVAWAASLGDRSENADYQYNKKLLREIDR 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R++ + +L + +V+ + G+V FGA V + N D E +RIVG DE + + I Sbjct: 61 RVRYLRKRLEDVKVVAYSP-EQEGKVFFGAWVEIEN-DEGETMKFRIVGYDEIYGRNDYI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+AR L+ KEE D VV+ TP GE + V + Y Sbjct: 119 SIDSPMARALLKKEEGDEVVVHTPTGEATWYVSSIRY 155 >UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYY1_9FIRM Length = 158 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/155 (38%), Positives = 92/155 (59%), Gaps = 2/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T +G E+ ++E D L VRR E+ I EA +GDL EN+EY AA+ +Q E R Sbjct: 3 ETVFLTQKGLEEKQKEYDELVGVRRKEVADRIKEATAYGDLSENSEYDAAKNEQAELEER 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E L+N ++ID + V G V + N+ +E+TYRIVG EAD NLIS Sbjct: 63 ISVLEDMLNNYEIID-SNAAKGDVVDLGLNVHLKNITKKKEETYRIVGSAEADPFNNLIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKV 155 SPI +GL+ + + V I P G+ V+++++K+ Sbjct: 122 NESPIGKGLLKHKVGETVSIDIPSGKTVKYKILKI 156 >UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae RepID=GREA_PETMO Length = 159 Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 85/145 (58%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T G EKL+ E + LK E+ I EARE GDL EN+EY A+ +QG + R Sbjct: 4 QVYQLTREGYEKLKREREELKKRLMGEVAERIKEARELGDLSENSEYEEAKNEQGMIDSR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 IK+I+ L NA++I+ +N V G V + + + EQ + +V EA+ ++N IS Sbjct: 64 IKEIDYILDNAEIIENGGNHDNSTVSLGKKVKIKDYRLNREQEFVLVTPQEANIEENKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGG 146 + SPI R L+G+++ +V+ IKT G Sbjct: 124 IESPIGRSLLGRKKGEVINIKTARG 148 >UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria RepID=A6W1U9_MARMS Length = 196 Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/153 (39%), Positives = 89/153 (58%), Gaps = 4/153 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T GA+ L EL +L +RP + + EA GD ENAEY ++Q + R++ + Sbjct: 42 ITQEGAQALLAELKYLWKEKRPAVTETVREAAAQGDRSENAEYIYGKKQLREIDRRVRYL 101 Query: 66 EAKLSNAQVIDVTKMPNNG-RVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 E +L V+D + P++ RV FGA VT L ++ + YRIVG DE D + IS++S Sbjct: 102 EKRLEVCTVVD--RFPSDQERVFFGAWVT-LEDEAGNLKEYRIVGPDELDHHSSYISIDS 158 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+AR L+ K+E D VVI+ GGE + + VEY Sbjct: 159 PVARALLKKQEGDEVVIRLAGGEKTYIIDAVEY 191 >UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria RepID=GREB_XANCP Length = 168 Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 1/152 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +L+ ELD L +RRPE++ A+A A GD ENAEY ++Q G + R++ + Sbjct: 15 ITPEGHARLKAELDELWRLRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYL 74 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L +V+D T + V FGA V + + DS E YRIVG DE D + IS++SP Sbjct: 75 SKRLEALRVVD-TAPTDPQAVFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISIDSP 133 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR L+ K DD + P G+ F V+ VEY Sbjct: 134 LARALLKKRVDDEFEAQLPSGKHTFVVVVVEY 165 >UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria RepID=GREB_HAEDU Length = 162 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/152 (37%), Positives = 88/152 (57%), Gaps = 2/152 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G + L +EL +L RP++ +++EA GD ENAEY + + + RI+ + Sbjct: 7 ITRAGWQALDQELKYLWKEERPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRRIRFL 66 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L Q+ID G+V FGA + + N + + Q YRIVG DE D +N IS++SP Sbjct: 67 SKRLEALQIIDYHPQ-QAGKVFFGAWIELENNEGEINQ-YRIVGCDEFDPTKNWISIDSP 124 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR LIGK DD + ++TP G+ F + K+ Y Sbjct: 125 VARALIGKCVDDEIEVQTPTGKAVFYINKIWY 156 >UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PP41_CHIPD Length = 157 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/141 (41%), Positives = 93/141 (65%), Gaps = 1/141 (0%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 +++REEL FLK+ R EI AIAEARE GDLKENAEY AA+E QG E ++ +E+ ++ Sbjct: 13 DQMREELSFLKTKGRAEIARAIAEAREKGDLKENAEYDAAKEAQGMHEAKVAILESAIAT 72 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI 131 A++++ + + +V VT+ N+ + + TY++V + EAD K N ISV SPI +GL+ Sbjct: 73 ARIVEADSI-DTSKVSILCKVTITNMANKKTVTYQLVSEKEADLKLNKISVTSPIGKGLL 131 Query: 132 GKEEDDVVVIKTPGGEVEFEV 152 GK ++ + P G ++F++ Sbjct: 132 GKAVGEIADVHAPNGSLKFKI 152 >UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H062_UNCTG Length = 158 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/155 (38%), Positives = 97/155 (62%), Gaps = 3/155 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M I +T G +KL +EL+ L+ R+P I IA AREHGDL+ENAEY AA+E Sbjct: 1 MSEIYLTREGRKKLIKELNELQK-RKPLIQDEIASAREHGDLRENAEYCAAKETLANLIR 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ +K++ A++I+ + ++ +V G TVT+ + + + Y IV +EAD N I Sbjct: 60 RIMELTSKIACAKIIEEQNI-DSDKVFIGVTVTIKD-EYGADYQYAIVDLEEADPVANRI 117 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 S+ SP+A+GL+G + V ++ P G+ +F+++K+ Sbjct: 118 SIQSPLAQGLLGHTAGETVAVELPAGKTKFKILKI 152 >UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LES5_SYNFM Length = 155 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 90/152 (59%), Gaps = 1/152 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 +P+T G +L EL FL+ V RPE+I + EAR G EN +Y ARE+ + +I+ Sbjct: 3 VPITRLGYHRLLRELFFLRHVVRPEVIEELQEARTGGIKIENQQYMLARERHMVLQKKIQ 62 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 D+E KL++ +++ V + + FG V + N+++ E Q Y++VG E++ +S++ Sbjct: 63 DLERKLASCEIV-VGRKFFFKQAEFGTIVVIQNIETGETQRYQLVGPYESNVVDGKLSID 121 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+ R L+G+ E + V++ TP G + V+ + Sbjct: 122 SPVGRHLVGRREGEEVLVYTPAGVRMYRVVSI 153 >UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira RepID=Q04UP0_LEPBJ Length = 927 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 92/153 (60%), Gaps = 1/153 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 AI +T R + +EE + L +V PE I EA+E GDL+ENAEY AA E+Q + I Sbjct: 766 AILVTRRALNRKKEEFEHLLNVEMPENSKDIGEAQERGDLRENAEYKAAMERQVQLQAAI 825 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 K +EA++ +A ++D+T + + ++ G T + N + E Y I+G +AD ++++IS Sbjct: 826 KRLEAEIKSAIILDLTNVKTD-KINIGVTAKLKNESTGEVVAYSILGAWDADTEKHIISY 884 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+A+ L+GK+ D V+ G E + V+++ Sbjct: 885 QSPLAKSLLGKKVGDAAVLNLTGAETRYTVLEI 917 >UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJ76_9ACTN Length = 161 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/155 (40%), Positives = 88/155 (56%), Gaps = 5/155 (3%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 I +T G +KL EEL FL++ +R E+ I ARE GD+ EN+EY A+ +QG E RI Sbjct: 11 IVLTPEGKQKLEEELHFLETEKRAEVGERIRVAREFGDISENSEYDDAKNEQGLMEARIA 70 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 I LSNA +++ K N RV G+TVTV E+ + IVG EAD IS Sbjct: 71 QINDILSNAVLVEAPKRSN--RVNIGSTVTVDM--GGRERVFTIVGAAEADVSSGKISNE 126 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVEY 157 SP+ L+G ++ D + P G V E +++K+E+ Sbjct: 127 SPVGAALLGGKKGDHFTAEGPTGRVIEMDIVKIEH 161 >UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostridium RepID=B9E669_CLOK1 Length = 157 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 2/155 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 MQ + +T G +KL EEL++LK+V+R EI AA+ AR GDL ENA+Y AA+E Q E Sbjct: 4 MQDVILTEAGKKKLEEELEYLKTVKRVEIKAALKAARAQGDLSENADYSAAKEDQSMTET 63 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI+++E +L NA +I+ + + + A V ++D EE T +V E+D K I Sbjct: 64 RIQELEYQLKNAVIIESSLETDVFDINRTALVKFYDVDEVEEVT--LVSSVESDVKNMRI 121 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 S+ SP+ + L + D + +P G + EV K+ Sbjct: 122 SIESPLGKALFRLKVGDKATVISPDGNYDVEVEKL 156 >UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ08_9BACE Length = 157 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%) Query: 14 LREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 73 L++EL +LK+VR E+ I EAR GDL EN+EY A+ +QG RI ++E L N Sbjct: 15 LKDELVYLKTVREKEVADQIKEARSFGDLSENSEYDEAKNEQGKLYSRIAEVENILENCV 74 Query: 74 VIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGK 133 VI+ ++ + V G+ + VL+++ +EE Y +VG EAD IS +SP R L+GK Sbjct: 75 VIE-EEIHDGKTVRLGSKLKVLDVEFNEELDYEVVGSQEADPMNGRISEDSPFGRALLGK 133 Query: 134 EEDDVVVIKTPGGEVEFEVIKV 155 + VV++ P G + ++V+ + Sbjct: 134 SVGEDVVVEAPAGALHYKVLSI 155 >UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides RepID=A5FRA2_DEHSB Length = 266 Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 90/150 (60%), Gaps = 2/150 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ IPMT G +KL +EL LK V+R +I + A D++ENA YHAA+EQ+G EG Sbjct: 111 VEKIPMTASGYKKLEDELCILK-VKRIAVIEEMRLAALDKDMRENAPYHAAKEQRGQIEG 169 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK+IE +L +A+V + T N +V G TV + +L + E+ Y +V E + + I Sbjct: 170 RIKEIEHELKHAEVSEYTD-NNTSKVNMGNTVKLRDLKNGEQCIYTLVSPKEIEPLKGRI 228 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEF 150 S +SPI + L + + D + I+ P G +++ Sbjct: 229 SASSPIGKALFNRSKGDNIEIEVPSGTLQY 258 >UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C12 Length = 154 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G + LR EL+ L++V R EI A I ARE GDLKENAEYHAA+E Q E RI Sbjct: 6 AITQEGLDALRAELEQLETVARREIAARIRTAREWGDLKENAEYHAAKEDQAHLETRILK 65 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + + NA V + + + V FG+TV V + Y +VG EA + +S+ S Sbjct: 66 LRERERNATVTEASSDVDI--VAFGSTVEVET--GGKNARYTLVGAAEASARDGKLSIES 121 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 P+AR LIG + V ++TP G V++V Sbjct: 122 PVARALIGARAGEDVQVQTPSGARILRVVRV 152 >UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria RepID=B0N6V6_9FIRM Length = 161 Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 3/138 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G EKL +E D L +V RP++I + AR GDL ENA+Y AARE+Q E RIK+I Sbjct: 8 LTQSGVEKLEQERDNLINVERPKVIEELQLARSQGDLSENADYDAAREKQAHLESRIKEI 67 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSD--EEQTYRIVGDDEADFKQNLISVN 123 + L NA+VI +M + V G TVT+L+L E ++Y+IVG E D IS Sbjct: 68 DYMLQNAEVISEEQM-DLKVVKPGTTVTILDLSEKDAEPESYQIVGYTETDPLNGKISNE 126 Query: 124 SPIARGLIGKEEDDVVVI 141 SP+A+ ++G +++V + Sbjct: 127 SPLAKAVLGHGVNEIVTV 144 >UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCGE Length = 161 Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 88/143 (61%), Gaps = 4/143 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G ++L +EL+ L V+RPEII + EAR+ GDL ENA+Y AA+ QQG E RI +I Sbjct: 8 LTQEGFKQLEKELENLIQVKRPEIIRLLQEARDQGDLSENADYDAAKAQQGEIETRIAEI 67 Query: 66 EAKLSNAQVI-DVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + L+NA++I D +V G+TV + + S + Y IVG EA+ +++ IS S Sbjct: 68 QDILANAKLISDHQAKTKVTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHKISNES 127 Query: 125 PIARGLIGK---EEDDVVVIKTP 144 P+A + G+ +E DVV I+ P Sbjct: 128 PLALAIYGRLIGDECDVVGIEVP 150 >UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia RepID=GREA_SYNWW Length = 159 Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 88/153 (57%), Gaps = 1/153 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + +T G EKL EL+ LKSV+R E+ I +A GD+ EN+EY A+ +Q F EGRI Sbjct: 7 VVLTKEGLEKLENELEHLKSVKREEVAERIKQAIAFGDITENSEYEDAKNEQAFIEGRII 66 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +E L A++++ + + V G+ +T+ + S E T +V E+ K IS Sbjct: 67 SLEKTLKKARLMEDEDIRTD-VVSLGSRITLKEMKSGREVTVTLVSSVESKLKDGKISDE 125 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ + ++GK+ V ++ P G +++++IKVE Sbjct: 126 SPVGKAIMGKKVKSTVSVEAPAGTIKYKIIKVE 158 >UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae RepID=D2RL35_ACIFE Length = 172 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/152 (34%), Positives = 93/152 (61%), Gaps = 3/152 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +KL +ELD+L+S +R ++ + A +GD+ EN+EY A+ +Q F EGRI + Sbjct: 7 LTEEGLKKLEDELDYLRSEKRQQVAERLKVAISYGDISENSEYDDAKNEQAFVEGRILTL 66 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEAD--FKQNLISVN 123 E + NAQ+I T + N V G V + ++++ +++ Y +VG EAD + IS Sbjct: 67 ENMIRNAQIIKDTDITKN-VVSLGCKVKIEDMETHDQEEYTVVGTTEADPMAEPPRISNE 125 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+ + ++G++ VV + TP GE++++++ V Sbjct: 126 SPVGKAILGQKVGAVVKVTTPIGELDYKIVAV 157 >UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales RepID=Q30T56_SULDN Length = 174 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 92/153 (60%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 PM++ G + L EE FL V +P+ A GD ENA+Y AA+E+ + R+ Sbjct: 4 PMSIEGYDVLIEEFKFLLEVEKPKTAQEKLVAAALGDRSENADYQAAKEKLRHIDKRLFY 63 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + A + A +ID + + + +V FG++V +L+L+SD+E+ Y I G E++ + LIS++S Sbjct: 64 LNAMIQKAHIIDPSTLLHT-KVSFGSSVRILDLESDKEEVYTICGVLESEPENGLISIHS 122 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+A+ ++GK D I+ P + E+E++++ Y Sbjct: 123 PLAQVMLGKRVSDEFKIQLPLMKKEYEILEIYY 155 >UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8A6_9FIRM Length = 151 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 1/150 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G + L++EL+ LKSV R EI I AR GDL EN+EY A+ +Q E RIK + Sbjct: 1 MTQEGYDALKKELNELKSVTRGEISEKIRVARGFGDLSENSEYDEAKNEQAVVEARIKKL 60 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E +L + ++I+ ++ + V G+ V +L++D DEE Y I E+ IS SP Sbjct: 61 EDQLKHVKIIERDQISTD-VVSVGSRVKILDMDYDEEMVYTIASSVESHNDLESISDESP 119 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 + +GLIG + DVV I P ++ +++++ Sbjct: 120 VGKGLIGHKVGDVVEIHAPAAVLKLKILEI 149 >UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms RepID=Q2Y7V5_NITMU Length = 213 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 4/154 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G ++L +E +L + RP++ A ++ A +GD ENA+Y +++ + RI+ + Sbjct: 34 ITPEGHKRLMDEFLWLMNRERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRRIRFL 93 Query: 66 EAKLSNAQVIDVTKMP--NNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +L A++ID + MP + R+ FGATVT +N + EE+ IVG +E D + IS Sbjct: 94 TRRLDMAEIIDPS-MPREDESRIFFGATVTYIN-EKGEEKIVSIVGVNEIDTTRGYISWV 151 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+AR L+ E DVV + PGG E E+++V Y Sbjct: 152 SPLARTLLKAREGDVVTLHAPGGTEELEILEVRY 185 >UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria RepID=GREB_NEIMA Length = 163 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/153 (39%), Positives = 85/153 (55%), Gaps = 1/153 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G + L++EL L + RPEI+ + A +GD EN +Y + + + RI+ + Sbjct: 9 ITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGDRSENGDYLYGKRRMREIDRRIRFL 68 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L A V+D +V FGATV +L D EQT +IVG DE D QN IS SP Sbjct: 69 TKRLEAAVVVDPELREATDQVFFGATVGLLRGDG-REQTVKIVGIDEIDTAQNKISWISP 127 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 +AR LI E D VV+ TP G E E++ VEY+ Sbjct: 128 LARCLIKAREGDEVVLNTPEGREEIEILSVEYI 160 >UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae RepID=GREA_ACHLI Length = 158 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 84/138 (60%), Gaps = 2/138 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G ++L++EL LK V+R E + A+ EARE GDL ENA+Y AAR +Q E RI +I Sbjct: 9 LTQSGLDQLKDELTHLKDVKRVENLEALKEAREQGDLSENADYDAARNEQARIEARILEI 68 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E+ L N ++I ++ V G V + ++ +++ Y +VG EAD K IS+ SP Sbjct: 69 ESILKNVKIIRTN--DDSTTVNIGKKVLLHFVEKNKDVEYHVVGTIEADPKNFKISIESP 126 Query: 126 IARGLIGKEEDDVVVIKT 143 + R + GKE D+V IK+ Sbjct: 127 LGRAIKGKEVGDLVQIKS 144 >UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RN4_LACBA Length = 132 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 2/133 (1%) Query: 24 VRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNN 83 V+RP++I I AR +GDL EN+EY +A+++Q E RI +E L AQ+ID + Sbjct: 2 VQRPKVIDRIKIARSYGDLSENSEYESAKDEQSMLETRISTVERMLQYAQIIDNDDT-DK 60 Query: 84 GRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKT 143 + G VT D DE + Y IVG EAD IS +SPIA+GL+G + V T Sbjct: 61 DEITVGKKVT-FQEDDDEPEEYTIVGAAEADPMSGKISNDSPIAKGLLGHRVGETVTFPT 119 Query: 144 PGGEVEFEVIKVE 156 PGG++ +VI V+ Sbjct: 120 PGGDMTVKVIAVD 132 >UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales RepID=A7HDS3_ANADF Length = 169 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 91/165 (55%), Gaps = 10/165 (6%) Query: 1 MQAIP--------MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAR 52 M+A+P +T G +L E + + SV RP+I+A + A GD ENAEY + Sbjct: 1 MKAVPSAMTKPRYITPEGFRRLASEHERIWSVDRPKIVAEVEAAAALGDRSENAEYVYGK 60 Query: 53 EQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE 112 ++ + R++ + ++ V+D P+ GR FGA VT+ + D E +T+R+VG DE Sbjct: 61 KKLRELDRRLRFLSERMDALTVVDPRPHPH-GRAFFGAWVTIED-DEGEARTFRLVGPDE 118 Query: 113 ADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 D LISV +P+ R L+GK+E D V+ P GE E ++ V + Sbjct: 119 FDVAAGLISVEAPLGRALLGKQEGDTVLFLRPAGEAELTIMAVRW 163 >UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUF3_CHRSD Length = 178 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 4/153 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T RG +L+ + L V+RP + + EA GD ENA+Y +++ RI+ + Sbjct: 25 ITARGYARLKGIHEHLSRVKRPALSTKVGEAAALGDRSENADYTYNKKELNRVIARIRYL 84 Query: 66 EAKLSNAQVIDVTKMP-NNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +L QV+D ++P + RV FGA VT L D EE T RIVG DE D + ISV++ Sbjct: 85 GKRLDELQVVD--RLPADTSRVYFGAYVT-LEDDDGEEMTIRIVGHDETDTDKRWISVDA 141 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+A+ ++GK D+ V + PGG+ + + + Y Sbjct: 142 PLAQAMLGKGLDEDVTVNAPGGDTTYIITDIAY 174 >UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter RepID=Q2N9J5_ERYLH Length = 159 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 P+T G L+ D L RPEI+ ++ A +GD EN +Y R++ + + Sbjct: 7 PITPGGYAALKARYDRLLGTERPEIVEIVSWAAGNGDRSENGDYIYGRKRMREIDRELAH 66 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + ++ +A+VI+ ++ P+ R FGAT+T+ + D D +T +VGDDE D I +S Sbjct: 67 LARRMKHARVIEPSEQPDKDRAFFGATLTLADED-DARKTVTLVGDDEQDASAGKIGWSS 125 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+AR L G D+ + P GE E+EV+ + Y Sbjct: 126 PLARALRGARVGDLRTVHLPSGEREWEVMAIAY 158 >UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNS9_FIBSS Length = 169 Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 1/148 (0%) Query: 10 GAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKL 69 G EK + E + LK V RP +I + A GD ENA Y R + + R+++++ L Sbjct: 23 GFEKFKAEWEHLKYVERPAMINQVQAAAAEGDRSENAAYTYGRMRVREIDRRLRELDRIL 82 Query: 70 SNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARG 129 AQ+++ +G + FGATV +++ + E+ Y IVGD E D Q IS+ SPI Sbjct: 83 DGAQIVE-NAATKDGSIRFGATVKMIDKKTKREKIYSIVGDKEIDPLQGRISMKSPIGEA 141 Query: 130 LIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 L GK+ D V ++ P G++ +E+++V Y Sbjct: 142 LQGKKAGDTVEVQAPRGKIVYEILEVNY 169 >UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3129D Length = 161 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 2/152 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G KL+ EL+ L + +R E+ A I EARE GD+ ENAEY A+ +Q E +I + Sbjct: 7 LTPDGLAKLKSELEHLSTEKRREVAARIKEAREFGDISENAEYDDAKNEQAMLESKIAQL 66 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E KL A VID ++ V G++V V + S + TY IVG EA+ + +S SP Sbjct: 67 EEKLRAATVID-SRSVGTDVVGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLSNESP 125 Query: 126 IARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 + + LIG++ + ++ P G + E + K++ Sbjct: 126 VGKALIGRKAGETATVQLPNGKQRELRITKID 157 >UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q096W9_STIAU Length = 144 Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Query: 14 LREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 73 + EL L +V RP++ A ++ A GD ENAEY +++ + RI+ ++ +L A Sbjct: 1 MHRELLRLLNVERPKVTAEVSAAAAQGDRSENAEYIYGKKRLREIDRRIRFLQKRLDTAT 60 Query: 74 VIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGK 133 ++ + + GRV FGATVT+ + D + TY+IVG DE D + ISV SPI + L+ K Sbjct: 61 IVTPAEQTDQGRVYFGATVTLEDEDG-VQTTYQIVGSDEIDTQGGRISVESPIGKALLRK 119 Query: 134 EEDDVVVIKTPGGEVEFEVIKVEYL 158 D V + P GE+E ++ + Y+ Sbjct: 120 AVGDSVEVMRPRGEIELTIVAIAYM 144 >UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides RepID=GREA_DEHE1 Length = 156 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 89/150 (59%), Gaps = 2/150 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ IPMT G +KL +EL LK V+R ++I + A D++ENA YHAA+EQ+G EG Sbjct: 2 VEKIPMTASGYKKLEDELSTLK-VKRIDVIEEMRLAAMDKDMRENAPYHAAKEQRGQIEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK+IE +L A V + T N +V G+TV + + + E TY +V E + + I Sbjct: 61 RIKEIEHELKYADVSEYTDT-NTSKVNMGSTVKLRDPKNGECCTYTLVSPKEIEPLKGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEF 150 S +SPI + + + + + + I+ P G +++ Sbjct: 120 SASSPIGKAVFNRNKGEQIEIEVPSGTLQY 149 >UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erwinia RepID=D2T9B8_ERWPY Length = 187 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 2/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ +T G L++ELDFL RPE+ + A GD ENA+Y +++ + Sbjct: 29 MKTKLITREGYNLLKQELDFLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 88 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R++ + L +++D + +G+V FGA V V N D D ++ +RIVG DE + + I Sbjct: 89 RVRYLTKCLEQLRIVDYSPQ-QDGKVFFGAWVEVENDDGDIKR-FRIVGYDEIFGRNDYI 146 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S++SP+AR L+ KE D + TP GE + + + Y+ Sbjct: 147 SIDSPMARALLKKEVGDAATVFTPAGEALWYINDISYV 184 >UniRef50_UPI000190F158 transcription elongation factor GreA n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-0664 RepID=UPI000190F158 Length = 62 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 45/57 (78%), Positives = 45/57 (78%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGF 57 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLK GF Sbjct: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKRKRGVSCCTRTAGF 57 >UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms RepID=Q2G8D8_NOVAD Length = 182 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 P+T G LR D L RP I+ ++ A +GD EN +Y R++ + + Sbjct: 28 PITPAGFAALRARYDHLLGTERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREIDRELAF 87 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + ++ ++V+D + + RV+FGATV + + D D + +VGDDE D + LI ++ Sbjct: 88 LARRMKASRVVDPARQEDRSRVLFGATVEIADED-DNRKVLTLVGDDEQDASKGLIGWSA 146 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 PIA+ L G D+ +++ P G+ E+E++ + Y Sbjct: 147 PIAKALRGSRVGDLRIVRLPSGQKEWEIMAISY 179 >UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYP5_9BACT Length = 741 Score = 89.7 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 55/153 (35%), Positives = 88/153 (57%), Gaps = 1/153 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 I +T G EK ++ELD + +++ E + EA GDL+ENAEY AARE+Q + + Sbjct: 587 IYVTKHGYEKQKKELDNIMNIQFAENARDLGEAISRGDLRENAEYQAAREKQAQLIEKAE 646 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++A L I+ + N V G VT+ N D + +TY ++G +AD +N+IS Sbjct: 647 RLKADLQKIVFIEPYTVKTN-IVSPGTKVTIKNKDKETTETYTLLGPWDADIDKNIISYL 705 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPI +GL+ K+ + V I+ P E+ ++IK+E Sbjct: 706 SPIGKGLLNKKTGETVTIQLPENEIVCDIIKIE 738 >UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia RepID=GREA_BORBU Length = 901 Score = 89.0 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 8 LRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEA 67 L K ++EL +LK V PE I +ARE GDLKENAEYH+A+E+Q F R+ + Sbjct: 749 LSSLNKKQKELKYLKEVEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLTKRLNSLML 808 Query: 68 KLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIA 127 ++ NA+VID TK + V FG V +LN + ++++Y I+G E++ + +IS SP Sbjct: 809 EIENAKVID-TKDLQSSVVGFGTKVVILNEVTGKDESYLILGPWESNPDEGIISYKSPFG 867 Query: 128 RGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 L+ E D + ++ V K+E Sbjct: 868 ENLLDSREGDSLNFVINNTNFKYFVKKIE 896 >UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N7T1_SLAHD Length = 155 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 5/153 (3%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G EKL EL +L++ +R E+ I ARE GD+ EN+EY A+ +QG E RI I Sbjct: 7 LTPEGKEKLEAELLYLENEKRAEVGERIKIAREFGDISENSEYDDAKNEQGMLEVRIAQI 66 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 L+NA V++ K N RV G+TVTV E+ + IVG EA+ + IS +SP Sbjct: 67 NDILANATVVEAPKRSN--RVTVGSTVTVDM--GGRERVFTIVGGAEANAAEGKISNDSP 122 Query: 126 IARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 + L+G ++ D + + P G ++E V+ +E+ Sbjct: 123 VGSVLLGSKKGDQLTTEGPTGRKIEITVLNIEH 155 >UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=GREA_MYCA5 Length = 159 Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 80/142 (56%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 I +T ++ +E L +L+ V RP++I I EAR GDL ENAEY AAR++Q E I Sbjct: 8 IYLTADSFKQYQERLQYLQEVLRPQVIEEIKEARNQGDLSENAEYDAARDKQATIENEIT 67 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +I+ L N ++I V G+ V+V++L D ++IVG + D IS Sbjct: 68 EIQHILDNYEIIKTQTNRQVSVVRIGSNVSVVSLKDDTVINFQIVGALDTDPFNGKISNT 127 Query: 124 SPIARGLIGKEEDDVVVIKTPG 145 SP+A+ +IG++ +VV ++ P Sbjct: 128 SPLAKAVIGRKAGEVVEVEAPN 149 >UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms RepID=Q0BR49_GRABC Length = 169 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 1/152 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G ++ EL L RP+I+ ++ A +GD EN +Y +++ + R++ + Sbjct: 15 MTPVGHAQMVAELKQLMREERPKIVEIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRFL 74 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L NA VID P+ R+ FGATVT +N +DE IVG DEAD IS+ SP Sbjct: 75 TKRLENAVVIDPATQPHKDRIYFGATVTYINA-ADETVQVTIVGADEADMALGRISLLSP 133 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +A+ L+G + D V + TP +++ V+Y Sbjct: 134 VAKALLGASKGDEVTVITPVKTEILDILDVDY 165 >UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=C5BN87_TERTT Length = 172 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 88/157 (56%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +T G KL+ ELD+L RPE+ + A GD ENA+Y +++ + Sbjct: 17 MSTPLITEEGLTKLKSELDYLWRTERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 76 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R++ + ++ + +V+ K G V FG+ V + N ++ E + RIVG DE ++N I Sbjct: 77 RVRYLRKRIDSLKVVRYAK-EQEGSVYFGSWVKIEN-EAGENKELRIVGYDEIFGEKNYI 134 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+A+ L+ K+ D ++KT GE +E++++ Y Sbjct: 135 SIDSPMAKALLRKKVGDEAIVKTEVGEFCWEIMEISY 171 >UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae RepID=B7CAB2_9FIRM Length = 162 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 4/141 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G L E + L R E+I + EAR GDL ENA+Y AARE Q EGRI+++ Sbjct: 8 VTQEGYNDLVNEHENLVHKVRQEVIVELQEARAQGDLSENADYDAAREHQAQVEGRIREL 67 Query: 66 EAKLSNAQVI----DVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 EA + NA++I DV V G+TV +L+L ++E T+ IVG EAD +S Sbjct: 68 EAMIKNAEIITESADVEDKKKKNVVKLGSTVKILDLSDNQEVTFNIVGTIEADPFNGKLS 127 Query: 122 VNSPIARGLIGKEEDDVVVIK 142 +P+A ++ + DV +K Sbjct: 128 NTTPLAEVIMDHKVGDVCTVK 148 >UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK30_9BACT Length = 693 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 89/150 (59%), Gaps = 5/150 (3%) Query: 9 RGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAK 68 R + L+EE + L + P+ AIA AREHGDL+EN E+ AA+++Q + + R+ +++A Sbjct: 539 RSYKALQEEHERLVNTEIPDNSKAIAAAREHGDLRENFEFRAAKDRQKYLQLRVGELDAM 598 Query: 69 LSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIAR 128 L+ D ++ RVI A VT+ + + E TY IVG + D +N +S +P+A+ Sbjct: 599 LNKIGPTDFSEFKVKNRVIPAAKVTIKS--PEAETTYSIVGMLDGDPDKNWLSFETPLAK 656 Query: 129 GLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 ++G + D I+ PGG+ E E++ VE L Sbjct: 657 SMLGHQVGD--SIELPGGD-EAEILAVEPL 683 >UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZQ0_HALNC Length = 175 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 90/163 (55%), Gaps = 9/163 (5%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M ++ RG +L ELD L V R ++ A++EA GD ENAEY + + + Sbjct: 1 MSTAVISARGHARLLAELDQLWRVERRLVVQAVSEAAALGDRSENAEYIYGKRRLREIDR 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNN-GRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 RI+ ++ +L + +V V + P + +V FGA +T+L D D EQT +VG DE D L Sbjct: 61 RIRYLQKRLGDIKV--VRQPPTDMNKVYFGARITLLYAD-DREQTVCLVGPDEIDPANQL 117 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPG-----GEVEFEVIKVEY 157 IS++SP+A+ ++GK D VV+ P V E+I +EY Sbjct: 118 ISIDSPLAKAVLGKALDAEVVLFLPSETSTPRRVHAEIIAIEY 160 >UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCH7 Length = 160 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 2/119 (1%) Query: 21 LKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKM 80 L +V R +I I +AR GDL ENAEY ARE+QG E RI+++E +S A++I Sbjct: 26 LINVERVNVIQEIKDARSQGDLSENAEYDVAREKQGIIESRIRELETIISKAKIIKAD-- 83 Query: 81 PNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVV 139 + RV G+ V++ N++S E QT++IV +AD ++ IS SPIA+ L+G+ + D V Sbjct: 84 LGSSRVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKISNFSPIAQALLGQHQGDEV 142 >UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIH5_9BACT Length = 159 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 6/151 (3%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G ++L++ ++ L + RPE+I A+A ARE GDL ENAEY AARE+Q + I + Sbjct: 7 ITKTGMQRLQKRINELLA-ERPEVIKAVAIAREFGDLSENAEYKAARERQRAIDNEIDYL 65 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ----NLIS 121 + +N +VID ++ P + V FG ++++ E Y +VG +E ++ +S Sbjct: 66 RRRSANLKVIDTSEFPKD-MVRFGTYCVAEDINTKECICYHLVGPEELNYYNEEGIQEVS 124 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEV 152 + SPI + L+ K+ ++ ++K P GE + ++ Sbjct: 125 IVSPIGKALLSKKIGEIAIVKAPIGERKLKI 155 >UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9H5_COPPD Length = 163 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 2/142 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +K+ EEL +LK V+R E+ I EAR GDL EN+E+ AA+E+Q E RI + Sbjct: 10 LTEEGYKKILEELKYLKEVKRKEVAEKIQEARALGDLSENSEFEAAKEEQALLEERIARL 69 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGD-DEADFKQNLISVNS 124 E + NA+V+ + + +V G V VL+ + E+++ IVG+ +E D IS S Sbjct: 70 ETLVYNARVVKAEDLALD-QVSVGTKVLVLDESAGREESFIIVGNSEEVDPFSGKISSKS 128 Query: 125 PIARGLIGKEEDDVVVIKTPGG 146 P+ L+G++ D V IK G Sbjct: 129 PLGSRLLGRKRGDRVEIKLRNG 150 >UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CEA Length = 156 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 1/155 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M M+ +KL EL+ L +R E+ + AR +GDL ENAEY A+ +Q E Sbjct: 1 MAVKQMSRESYDKLVAELNDLIINKRKEVAERLKVARSYGDLSENAEYDEAKNEQAILEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 I +++ + NA+++D + + + + + +T+ LD+ + +T+ IV + A+ ++ I Sbjct: 61 HIAELQYTIDNAEIVDDSNISVD-EIGMSSKITIKRLDTGKIETFTIVSTNHANVREGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 S SPI + + K DV ++ P GE++FEV+++ Sbjct: 120 SDASPIGKAAMKKRVGDVFIVDAPAGELKFEVVEI 154 >UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=B5ZLJ0_GLUDA Length = 180 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 1/152 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +R EL+ L RP I+ ++ A +GD EN +Y +++ + R++ + Sbjct: 23 VTPAGMAAMRGELNALLRDERPRIVDIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRFL 82 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 ++ A V+D RV FGATVT + D D E+T IVG DE+D +S+ SP Sbjct: 83 TRRIEKAIVVDPAAQTRRDRVFFGATVTYVTED-DTERTVVIVGVDESDLAAGQVSLASP 141 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR L+G D V + TP G E++++ Y Sbjct: 142 VARALLGGRVGDEVRLLTPAGAEMIEILRIAY 173 >UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus RepID=GREA1_LACPL Length = 156 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G + +E++ LK +RPE I +A A GD ENAEY +A+ G E R++ + Sbjct: 8 MTAAGYHAIEQEIEDLKQ-QRPERIRILAAAAALGDRSENAEYSSAKRDLGRLESRLRYL 66 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L AQ++ + +N ++ G VT+ LD ++ TY++VG EA+ +Q IS SP Sbjct: 67 NKQLQYAQIV---QPADNDQLDIGKFVTIEFLDDHDQITYQLVGKQEANLEQQKISFTSP 123 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 I + L DDVV + P G + +VI V+ Sbjct: 124 IGQALANHTVDDVVTVNAPNGAYQVKVIAVK 154 >UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class) RepID=B9KZF4_THERP Length = 156 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 85/155 (54%), Gaps = 3/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T G L +EL+ L+ + P ++ + + GD+ +N+EY +E+ E R Sbjct: 5 RPIVLTPEGKAALEQELEHLRQHKLPLLLERLQQLSNEGDISDNSEYEDTKEELVLTEAR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++IE L AQ+I T+ V G+ VTV++ + E T+ IV +EA+ Q IS Sbjct: 65 IREIEHILRRAQMI--TRAGPQDEVRLGSRVTVIDEEGSVE-TWVIVSPEEANAAQGRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + SP+ L+GK V ++ PGGE+ F + ++E Sbjct: 122 IESPVGAALLGKRVGTTVTVRAPGGEMRFTIQRIE 156 >UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDC6_THET1 Length = 159 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 6/137 (4%) Query: 23 SVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPN 82 +V R +I A I EA+E GD+ E+ EY A+ Q F EGRIK++E L+NA+VID + P Sbjct: 26 TVERAKISARIREAKEGGDISESGEYEDAKHSQAFLEGRIKELEKLLANAEVIDRSAQP- 84 Query: 83 NGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN---LISVNSPIARGLIGKEEDDVV 139 G V G+ VTV ++ TY IV EA ++ IS S + L+G+ D V Sbjct: 85 AGTVGLGSKVTV--EENGRTYTYTIVDGAEAGRGRDGEVRISSKSAVGSALLGRRVGDSV 142 Query: 140 VIKTPGGEVEFEVIKVE 156 ++ P G++ F+++ VE Sbjct: 143 EVEVPAGKLTFKILSVE 159 >UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae RepID=A5VME9_LACRD Length = 165 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 6/152 (3%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G ++ E++ L+ +RP I + AR GDL EN EY A+ + E R++ + Sbjct: 18 MTANGYHEIEEQIAKLQQ-QRPAKIEQLKAARALGDLSENTEYSTAKRELRHLESRLRYL 76 Query: 66 EAKLSNAQVIDVTKMPNNGRVI-FGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +L A+++ P N I G TVT+ D E++TY IVG EAD + IS +S Sbjct: 77 NKQLQYAEIV----TPKNDHTIDLGTTVTIEFEDDHEQETYHIVGKQEADLAKQKISFDS 132 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 P+ + ++ + V ++ P + +++KVE Sbjct: 133 PLGQAILHQTAGTTVTVEAPQSSYKVKIVKVE 164 >UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCAP Length = 163 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 79/133 (59%), Gaps = 2/133 (1%) Query: 13 KLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNA 72 K + E L +V RP + A++ EAR GDL ENAEY AAR++Q E RI ++E L NA Sbjct: 18 KYKNEYTELVTVERPAVQASLKEARAQGDLSENAEYDAARDRQSEVERRILELERILENA 77 Query: 73 QVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI- 131 ++ID TK + GATV LN+ +++E I+G +++ +N IS SP+A+ ++ Sbjct: 78 EIID-TKSAVQNKAGIGATVRYLNMKTNKELVVTIMGPHDSNPIENKISNESPVAQAIME 136 Query: 132 GKEEDDVVVIKTP 144 DVV ++ P Sbjct: 137 ANGIGDVVEVEVP 149 >UniRef50_UPI0001A44114 transcription elongation factor GreA n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A44114 Length = 79 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/53 (79%), Positives = 45/53 (84%), Gaps = 2/53 (3%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLK--ENAEYHAA 51 M+ PMTLRGAEKLREELD LKSVRRPEIIAAIAEAREHGDLK +N HA+ Sbjct: 1 MKQFPMTLRGAEKLREELDHLKSVRRPEIIAAIAEAREHGDLKGMQNIMLHAS 53 >UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus RepID=C1XQ58_9DEIN Length = 159 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 6/158 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G ++L++EL LK+V+R EI AA +A E GDL+ENA Y AR Q + R Sbjct: 5 KPVYLTAEGLKRLQDELTTLKTVKRQEIAAAFEQAIEEGDLRENAGYDEARRAQWDNDRR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVI-FGATVTV-LNLDSDEEQTYRIVGDDEADFKQNL 119 I ++E+ L+ A V++ NG + G V+V L D+ + IVG EAD Sbjct: 65 ISELESILARAVVVEA----GNGTPLEVGLGVSVELETDTGARMSLTIVGSHEADVFNGK 120 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 IS SP+ + L+GK+ D V +P G + ++++ Y Sbjct: 121 ISNESPMGQRLMGKKVGDRVEYPSPKGVQSYTIVELSY 158 >UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Bacteria RepID=Q12SN9_SHEDO Length = 166 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 5/154 (3%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G KL EL++L RPEI +A A GD ENA+Y + +GR++ + Sbjct: 12 ITAEGLAKLTHELNYLWREYRPEITKKVAWAASLGDRSENADYKENKRLLRQIDGRVRFL 71 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE--ADFKQNLISVN 123 ++ +V+ G+V FGA V + N D ++ +RIVG DE D K IS++ Sbjct: 72 RKRIEALKVVPYA-AEQEGKVFFGAWVEIEN-DEGVKKRFRIVGPDEIYGDAK-GYISID 128 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+AR L+ KE DD + TP GE + + K+ Y Sbjct: 129 SPMARALLKKEVDDDASVLTPTGEQFWYINKIFY 162 >UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia RepID=B1ZZX3_OPITP Length = 616 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 1/144 (0%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 E+ REE + + S + PE AIA AREHGDL+EN+EY A+++Q ++E L Sbjct: 466 ERKREEYETIVSKKIPENSKAIAAAREHGDLRENSEYKMAKQEQQVLMAHKTNLERDLGR 525 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI 131 A++ D K + +V G V V ++ TY ++G + D +++ IS +P L+ Sbjct: 526 ARISDF-KDASIDQVSVGTVVEVASVKDGHHTTYTVLGAWDGDPEKHFISYKTPFGAALL 584 Query: 132 GKEEDDVVVIKTPGGEVEFEVIKV 155 GK+ DV+ +KT + ++ ++ + Sbjct: 585 GKKTGDVINVKTDASDEDYAIVSI 608 >UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9C2_9ACTN Length = 156 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 4/150 (2%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 I +T G +KL EEL + + EI+ I EAR GDL EN+EY AA+++Q RI Sbjct: 6 IVLTAEGRQKLVEELAWREGDYAKEIVEDIKEARAFGDLSENSEYDAAKDKQAQNAARIA 65 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +I+A L+NAQV T + V G+TV++++ + E +VG E + ++ IS Sbjct: 66 EIQAILANAQVAATT---GDLTVSIGSTVSLIDPNG-EVMEVTLVGTTETNSLEHKISNE 121 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVI 153 SP+ +IG E D V + TP G+ I Sbjct: 122 SPVGHAIIGHGEGDSVEVVTPSGKTRVYTI 151 >UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE Length = 231 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +G +++++EL L RP+I+ + A +GD EN +Y +++ + RI+ + Sbjct: 74 ITPQGYQRIKDELLDLIDNERPKIVEIVHWAASNGDRSENGDYLYGKKRLREIDRRIRFL 133 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L A+V+D + +V FGATV+ ++ D E+T I+G DEAD QN +S +P Sbjct: 134 TKRLEIAEVVDPAVHAGSDQVFFGATVSYVD-DEGVERTITIMGIDEADSAQNQVSWIAP 192 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 ++R L+ D V + TP G E++ V Y Sbjct: 193 VSRALLKARVGDEVALPTPAGVRMLEILDVSY 224 >UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Actinomycetales RepID=D2PP26_9ACTO Length = 169 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 9/159 (5%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + +T G ++L+ EL+ LK R EI I+EAR+ GDLKEN YHAA+++QG E RI+ Sbjct: 10 VWLTQDGYDQLKSELEHLKGPARAEITQRISEARDEGDLKENGGYHAAKDEQGKIEARIR 69 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE-----ADFKQN 118 +E L A+V + K ++G V G V++ D+ +T+ ++G E + Sbjct: 70 QLEDMLRRARVGETPK--DDGVVEPGMKVSITFAGDDDVETF-LLGSRELLALDTSVDID 126 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 + S SP+ ++GK++ D + P G +V E++ E Sbjct: 127 VYSPQSPLGAAIMGKKKGDKATYEAPNGKDVTVEIVAAE 165 >UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8 Length = 155 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 10/158 (6%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + +T G +L+EEL+ LK+V+R EI A +A E GDL+ENA Y AR E RI Sbjct: 5 VYLTPEGYRRLQEELNHLKTVKRQEISADFEQALEEGDLRENAGYDEARRAMWQNEARIA 64 Query: 64 DIEAKLSNAQVIDVTKMPNNG---RVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +E LS A +++ NG +V G V L ++ E + IVG EAD I Sbjct: 65 QLEDLLSRAVIVE------NGSFDQVALGCQVE-LETETGERLSLAIVGSHEADIFSGKI 117 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S SP+ + L+GK+ DVV I+ G + +++++ L Sbjct: 118 SDESPLGQALLGKKVGDVVEIRGKKGAQVYTILEIKPL 155 >UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobacillus fermentum RepID=D2KXD7_LACFE Length = 303 Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 77/131 (58%), Gaps = 7/131 (5%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G + E+++ LK +RP +IA + AR GDL EN EY A+ + E ++ + Sbjct: 20 MTPAGYRAIEEQIEALKQ-KRPTLIARLKAARVLGDLSENTEYSTAKRELRHLESCLRYL 78 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGD---DEADFKQNLISV 122 + +L+ A+VIDV+ ++G+V G VT+ LD EE TY+IVG ++A + +++ Sbjct: 79 DKQLTYAKVIDVS---DDGKVALGKVVTIRFLDDQEEATYQIVGRYQAEQASLTEEVLAF 135 Query: 123 NSPIARGLIGK 133 +SP+ L GK Sbjct: 136 DSPLGLALKGK 146 >UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPJ1_9BACE Length = 197 Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 2/150 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T + + +REELD+ + RP+++ A+ EAR GDL EN EY AA++++ E RI+ + Sbjct: 35 LTRKDLQMMREELDYRRITLRPQLLEAVKEARGFGDLSENFEYKAAKQEKNRNESRIRFL 94 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E + A VI P+ V VTV + DE +TY++V D IS SP Sbjct: 95 ENMIRTAVVISDQAAPDT--VGLYDKVTVYLEEDDETETYQVVTTMRQDALHGRISKESP 152 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 + L+GK D + I+ + VIK Sbjct: 153 VGSALLGKRVGDRIYIQVNDNYGYYVVIKA 182 >UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema RepID=GREA_TREPS Length = 162 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 1/141 (0%) Query: 15 REELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQV 74 ++EL L VR PE I A E GDL+ENAEY AARE+Q + ++ ++ AQV Sbjct: 18 KKELQDLLDVRIPENSREIGRALELGDLRENAEYKAAREEQTRLNNMVTRLQEEIERAQV 77 Query: 75 IDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKE 134 D T + GRV FG +++ N S E++TY I+G E+ ++ +IS SP+ L+ ++ Sbjct: 78 FDPTTVV-AGRVSFGTVISLKNHTSGEDETYTILGPWESAPERGIISYMSPLGSNLLNRK 136 Query: 135 EDDVVVIKTPGGEVEFEVIKV 155 + + E +E++ + Sbjct: 137 TGEQLAFTVGEHEKVYEILSI 157 >UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bifidobacteriaceae RepID=B8DTJ6_BIFA0 Length = 160 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/145 (37%), Positives = 75/145 (51%), Gaps = 4/145 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T +K++EEL + R EI IA AR GDL EN Y AARE+Q EGR Sbjct: 6 KVVLLTQEAYDKMKEELAHREGEYRDEITERIAAARAEGDLSENGGYQAAREEQSKNEGR 65 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++ KL NA++I+ P G V G+ VT+ L +E Q D ++IS Sbjct: 66 INELIVKLRNAKIIEA---PKAGEVGNGSLVTI-ELGGNEMQYVIGSRDITVATDYDVIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGG 146 SPI +IG + DVV K P G Sbjct: 122 PESPIGGAIIGHKVGDVVTYKAPNG 146 >UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Actinobacteria (class) RepID=GREA_SACEN Length = 162 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 5/157 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T ++L+ ELD L RP I A I EARE GDLKEN YHAARE+QG E R Sbjct: 5 QVTWLTQDAFDRLKSELDELVG-NRPVIAAKINEAREEGDLKENGGYHAAREEQGHLESR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE-ADFKQNLI 120 I+ ++ L A+V DV G G+ +TV D DE + + + +E A + Sbjct: 64 IRQLQELLRTAKVGDVPT--EAGVAKPGSVLTVRYDDEDETEKFLLATREEGAHGDLEVY 121 Query: 121 SVNSPIARGLIGKEEDDVVVIKTP-GGEVEFEVIKVE 156 S +SP+ + L+ +E + + P GG ++ ++K E Sbjct: 122 SPSSPLGQALLDAKEGETREYELPNGGTMKVTLVKAE 158 >UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clostridiales RepID=A9KJU6_CLOPH Length = 167 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 2/149 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +K++EE+++ K R E I A+ EAR HGDL EN EY+AA++ + EGRI+ + Sbjct: 5 LTKNDIDKMQEEIEYRKLTVRKEAIDAVKEARAHGDLSENFEYYAAKKDKNKNEGRIRYL 64 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E + A+VI+ + + TV++ + +E + Y+++ + Q LIS+ SP Sbjct: 65 ERMIKTAEVIE--DHSSEDEIGINNTVSIYFEEDNEIEKYKLITTVRENSLQGLISIESP 122 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 + + ++G + +D V +K + +IK Sbjct: 123 LGKAILGHKVEDRVYVKVRDDYGYYVIIK 151 >UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae RepID=C8W826_ATOPD Length = 159 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 5/154 (3%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 I +T G +KL +EL + + + EI+ I EAR GDL EN+EY AA+E+Q E RI Sbjct: 7 IVLTPEGRQKLVDELAYREGEKHDEIVERIKEARGFGDLSENSEYDAAKEEQSHNESRIN 66 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQT-YRIVGDDEADFKQNLISV 122 +I LS A+V++ + +V TV D+ + T Y IVG E + ++ IS Sbjct: 67 EIRQILSVAKVVE---GGSKRKVTVAIGTTVELADAKGKTTKYVIVGTTETNSLEHKISN 123 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKV 155 SP LIG ++ D V TP G+V ++ +I + Sbjct: 124 ESPAGEALIGHKKGDEVEFTTPNGKVKKYTIISI 157 >UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2 RepID=C8S319_9RHOB Length = 167 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 2/96 (2%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+ +EA+L +A +D + P G V FGA V V D Q ++I G+DEAD QN I+ Sbjct: 69 IRYLEARLRSAIPVDPSSQPA-GEVAFGARVEVALADGSR-QVWQITGEDEADATQNRIA 126 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+AR L+G E D+V+ + P G VE EV+ + Y Sbjct: 127 PQSPLARALLGAEVGDLVIWRKPSGPVELEVLAIAY 162 >UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABM5_GEMAT Length = 161 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 4/129 (3%) Query: 16 EELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVI 75 E+L F +V P I +A E GDLKEN+EY AA E+Q F + R+ + +++ I Sbjct: 14 EKLQFELNVTLPN---EIRKAVELGDLKENSEYKAALERQQFVQARLGQLTQRVTKLANI 70 Query: 76 DVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEE 135 D+T++P + RV G+ V V +L S +TY +V D + +++ SPI R L GK Sbjct: 71 DITQIPGD-RVGLGSKVIVEDLQSKARETYELVFGDAGELHDGHVTMGSPIGRALQGKSV 129 Query: 136 DDVVVIKTP 144 + ++K P Sbjct: 130 GEEAILKLP 138 >UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria RepID=A2SJD8_METPP Length = 213 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 81/152 (53%), Gaps = 1/152 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +LR EL L RP+++ ++ A ++GD EN +Y +++ + RI+ + Sbjct: 58 ITPAGFARLRAELMQLLDDERPKVVETVSWAAKNGDRSENGDYLYGKKRLREIDRRIRFL 117 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L A+V D + + +V FGATVT D E+T I G DEAD Q +S SP Sbjct: 118 TKRLEIAEVADPSVHRGSDQVFFGATVTYAAPDG-VERTITIKGIDEADNLQAEVSWISP 176 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR L+ D V + TP G EVI+V Y Sbjct: 177 VARALLKARVGDEVTLLTPQGPQTIEVIEVRY 208 >UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Actinomycetales RepID=A0JU41_ARTS2 Length = 164 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 11/149 (7%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 A +T ++L+ ELD L R EI+ I AR+ GDLKEN YHAA+E+QG E RI Sbjct: 9 AAWLTQEAFDRLKAELDHLSGAGRAEIVQKIEAARQEGDLKENGGYHAAKEEQGKIEARI 68 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQ----TYRIVGDDEADFKQN 118 + + L +A V + P + ++ + V + DEE + I GD + D Sbjct: 69 RQLTVLLRDAH---VGESPADDGIVEPGMIVVARIAGDEETFLLGSREIAGDSDLD---- 121 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGE 147 + S SP+ ++G +E D + P G+ Sbjct: 122 VFSEKSPLGSAIVGHKEGDKLSYTAPNGK 150 >UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter necessarius RepID=B1XUH7_POLNS Length = 168 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 7/160 (4%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +TL G E+++ EL L ++ R E++ + A +GD EN +Y +++ + RI+ + Sbjct: 7 ITLAGYERIKTELLQLLNLDRLEVVKVVHWAASNGDRSENGDYIYGKKRLREIDRRIRFL 66 Query: 66 EAKLSNAQVIDVTKMPNN----GRVIFGATVTVLNLDSDE---EQTYRIVGDDEADFKQN 118 +L A V+D + + +V FGA+VT L+ E + IVG DE D ++ Sbjct: 67 NKRLEFAIVVDNSARKSGENDADQVFFGASVTYSALEGPEAGKRTSITIVGVDEVDLDKS 126 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 +S SPIA+ LI D V I+TP G E E++ V+YL Sbjct: 127 HVSWVSPIAKALIKSRIGDCVFIQTPTGPTEIEILDVQYL 166 >UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter RepID=B4UMG4_ANASK Length = 169 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Query: 56 GFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADF 115 G + RI ++A L V+ P G+V FG VTV D T+R+VG DEAD Sbjct: 66 GELDARIAALDATLGALTVLGPEATPE-GQVGFGTWVTVEEEDG-RRVTWRLVGPDEADA 123 Query: 116 KQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 ++ LIS SP+AR L+G+ DVV + PGGE E V+ V Sbjct: 124 RRGLISAGSPVARALLGRRAGDVVEVNRPGGEAELTVVAV 163 >UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Corynebacterineae RepID=GREA_MYCVP Length = 164 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 6/134 (4%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 Q +T ++L+ ELD L + RP I A I + RE GDL+EN YHAAREQQG E Sbjct: 4 TQVTWLTEESYDRLKAELDQLIA-NRPVIAAEINDRREEGDLRENGGYHAAREQQGQEEA 62 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE---ADFKQ 117 RI+ ++ L+NA+V + K +G + G+ V V D +++ ++G E +D K Sbjct: 63 RIRQLQELLNNAKVGEAPKQ--SGIALPGSVVKVYYDDDEKDTETFLIGTREQGVSDGKL 120 Query: 118 NLISVNSPIARGLI 131 + S NSP+ LI Sbjct: 121 EVYSPNSPLGGALI 134 >UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FB5 Length = 144 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 76/144 (52%) Query: 14 LREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 73 ++ EL L + RPE + I+ A +GD EN +Y +++ + RIK + + +A Sbjct: 1 MQRELSSLIKLDRPETVKVISWAAGNGDRSENGDYIYGKKKLRQIDSRIKFLLTAIEDAD 60 Query: 74 VIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGK 133 ++ + + +V FGA V +L+ S RIVG E + IS SP+A+ LIG+ Sbjct: 61 IVHPSTSIDKKKVYFGANVKLLDEQSKSTLDIRIVGAHEINHNIGNISWLSPLAKALIGR 120 Query: 134 EEDDVVVIKTPGGEVEFEVIKVEY 157 D++ ++TP + ++KV+Y Sbjct: 121 TSSDLIEVQTPMNIKTYIILKVDY 144 >UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Corynebacterineae RepID=GREA_RHOE4 Length = 164 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 76/149 (51%), Gaps = 8/149 (5%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T ++L+ ELD L + RP I A I E RE GDLKEN YHAARE+QG E R Sbjct: 5 QVTWLTQESHDRLKNELDQLIA-NRPVIAAEINERREEGDLKENGGYHAAREEQGQQEAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE--QTYRIVGDDEA--DFKQ 117 I+ ++ L++A+V + P V +V + D DE +T+ I +E D K Sbjct: 64 IRQLQELLNSAKVGEA---PTQSGVALPGSVVKVYYDGDESDTETFLIATREEGARDAKL 120 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGG 146 + S NSP+ L+ + D P G Sbjct: 121 EVYSPNSPLGGALLEAKVGDTREYNLPNG 149 >UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma RepID=GREA_UREP2 Length = 156 Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 3/133 (2%) Query: 24 VRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVI-DVTKMPN 82 V+ P I + +ARE GDL ENA+Y AA+ +Q + R +IE L N ++I DV + + Sbjct: 24 VKWPAITKQLQDAREQGDLSENADYDAAKNEQAALKKRKDEIEEILENYELIEDV--LRS 81 Query: 83 NGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIK 142 V G+T+ + N D E+ +VG ++D N IS+++P+ + L+ +++ V + Sbjct: 82 TDEVSIGSTIEIYNYQKDCEEVITLVGSMDSDPFANKISIDTPLGKALVKQKKGTEVTVH 141 Query: 143 TPGGEVEFEVIKV 155 T + ++IK+ Sbjct: 142 TLASPYKVKIIKI 154 >UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes RepID=A3HZU2_9SPHI Length = 166 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 75/128 (58%), Gaps = 6/128 (4%) Query: 35 EAREHGDLKENAEYHAAREQQ-----GFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFG 89 +A + ++E + AA EQ+ F +IK ++ +++ A+++D+++ P N + FG Sbjct: 40 QAEKQALIEEKSNLTAATEQEKRIASNFISAKIKLLDERIATAKIVDLSEQPKN-EIRFG 98 Query: 90 ATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVE 149 A VT+ S + TY++VG DEAD +N IS SPIA LIGK+ + + G+ Sbjct: 99 AKVTLKIGKSPKAMTYQLVGVDEADISKNKISFISPIAMILIGKKVGEKATLSLTKGDRV 158 Query: 150 FEVIKVEY 157 FEV++++Y Sbjct: 159 FEVMEIKY 166 >UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae RepID=A6STV7_JANMA Length = 175 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 1/99 (1%) Query: 59 EGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN 118 E RI ++ ++ +A+V+D + + R+ FGA+V N + E T IVG DE D Q Sbjct: 74 EQRIHYLQTRVESAEVVDASVHADGDRIFFGASVDYENT-AGETHTATIVGLDELDPAQG 132 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 IS SP+A+ L+G EE D V+++TP G E V+ V Y Sbjct: 133 RISWLSPLAQSLLGAEEGDTVLLQTPAGPEELHVLTVRY 171 >UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=Q1H282_METFK Length = 165 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 2/108 (1%) Query: 50 AAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVG 109 A +++ + ++ ++A+L +A V+D P + V+FGATV V + ++ T+ IVG Sbjct: 60 AVQQRLAMIDRDLRYLQARLESAIVVDPATQPTD-TVLFGATVEVED-ENGNSHTFMIVG 117 Query: 110 DDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +DEAD N +S SP+A+ LIG++ D V P G +E E+I + Y Sbjct: 118 EDEADIATNRVSWVSPLAKALIGQKIGDSVTWHRPAGNLELEIIAIHY 165 >UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=uncultured bacterium URE4 RepID=C0JZV3_9BACT Length = 112 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 69/113 (61%), Gaps = 3/113 (2%) Query: 45 NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQT 104 N A R QG E +I ++ K++NA+VID +K+ + V + VTV N+++ + Sbjct: 3 NTMLRAMR--QGLLEVKIARLKEKVANARVIDESKLSAD-TVQLLSKVTVENMNAKMKMQ 59 Query: 105 YRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 ++IVG+ EADF + L+S ++PI + L+G + +VV K P G ++F+++ + Sbjct: 60 FQIVGESEADFSKGLLSASTPIGKALMGHGKGEVVEAKVPSGIMKFKILDISL 112 >UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bifidobacterium RepID=A1A150_BIFAA Length = 159 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 8/147 (5%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T +K++EEL + + R EI++ ++ AR GDL EN Y AARE Q +GR Sbjct: 5 KTILLTQEAYDKMKEELAWREGEYRDEILSKVSAARAEGDLSENGGYQAAREAQRVNQGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ--NL 119 I ++ KL NA+++ P G V G+ VT L+ + + ++G + ++ Sbjct: 65 IDELTVKLRNAKILTA---PKAGEVGDGSLVT---LEVNGREMVYVLGTRDLSIATDYSI 118 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGG 146 IS SPI + G D V P G Sbjct: 119 ISPESPIGAAINGAHAGDTVTYTAPNG 145 >UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XEY1_9BACT Length = 170 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 15/152 (9%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T GA++LR EL+ L++ +R + G+ NA+ + I + Sbjct: 33 LTPDGAQRLRAELNRLQAEKRSQTAT--------GEFSGNAQ-----TEMQLVGQHILQL 79 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E L+ A+++ P +V FGATVTV + +S E YRIVG DE D ++ +S SP Sbjct: 80 EQSLATAEIVPPPPQPWE-QVRFGATVTVRD-ESGNETRYRIVGVDETDIDRDWVSWLSP 137 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 IAR LI + V + P GE + E++ + Y Sbjct: 138 IARALINARIGERVHFRFPAGEKQLEIVSITY 169 >UniRef50_C6UNA6 Putative transcription elongation factor GreA n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UNA6_HODCD Length = 155 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 3/141 (2%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M A +T G L +L++ + ++P + A + AR GDL ENA+Y AAR + E Sbjct: 1 MAATTLTALGYISLVAQLNWRRQHKKPALKAQLKAARSLGDLSENADYQAARREDKLNEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI +I L+ A++ N R + +TV VL + + IVGDDEA + + Sbjct: 61 RINEILQTLARAKLAPARSAAN--RPSYNSTV-VLKRADGKLLAFNIVGDDEAIATEANV 117 Query: 121 SVNSPIARGLIGKEEDDVVVI 141 ++S +AR + K+ DVVV+ Sbjct: 118 GLSSDVARQCLNKKVGDVVVV 138 >UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomycetales RepID=B2GLP4_KOCRD Length = 165 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 9/147 (6%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T ++L++ELD++ R EI+ I +AR GDLKEN YHAARE+QG EGRI + Sbjct: 9 LTQEAYDRLKKELDYIAGPYRQEIVDRIEQARSEGDLKENGGYHAAREEQGKNEGRIVQL 68 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTY----RIVGDDEADFKQ-NLI 120 L NAQ V + P + VI V + D E T+ R V +D + + Sbjct: 69 TQLLENAQ---VGEAPADDGVIEAGMVVTAEIAGD-EMTFLMGSREVAEDLTGGEDLEVF 124 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGE 147 S SP+ + G + + V + P G+ Sbjct: 125 SERSPMGAAINGHKVGETVSYQAPNGK 151 >UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VBG3_9CLOT Length = 195 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 3/148 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +K+ EE+++ K V R E + A+ EAR GDL EN EY+AA++ + E RI+ + Sbjct: 35 LTESDIKKMEEEIEYRKVVVRKEKLEAVKEARAQGDLSENFEYYAAKKDKNANEKRIRYL 94 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + + A++I + V TV V + +EE TYRIV D +IS SP Sbjct: 95 DRMVRTAEII--KDESADDEVGLNNTVRVYFEEDEEEDTYRIVTTVREDVLNGIISNISP 152 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVI 153 + + L+G + D V + PG F ++ Sbjct: 153 MGKALLGHKVGDRVEV-VPGKGDPFHIV 179 >UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQE9_OPITP Length = 166 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 15/151 (9%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T GAE+L EEL+ L++V RP + A A+ +L++ E R +++ Sbjct: 31 LTEAGAERLHEELNRLRTVERPALAGAAADLDAKRELRKLDE-------------RAREL 77 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + L+ A++I + P+ V FGA VTV D TYRIVG DE +F IS SP Sbjct: 78 QQILATAEIIS-SPAPDRSIVRFGAKVTVKEEDGTT-STYRIVGIDETEFYTGGISFQSP 135 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +A+ L+G D + ++P G + E+ +E Sbjct: 136 LAQALLGASVGDRIQFQSPAGPRQLEIQLIE 166 >UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5K0_9BACT Length = 169 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 16/150 (10%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT+ GAE+L++EL L A + L+E E +R++ R++ + Sbjct: 32 MTVDGAERLQKELAVL--------------ADQKAQLEETGEGEISRDELRRVTSRMQAL 77 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L++A+VI +++ + V FG VT+ + E++ YRIVG DE D + IS SP Sbjct: 78 SQRLADAEVIAISESRGD-EVRFGMFVTIRDAGGVEDE-YRIVGVDEVDLEAGWISWLSP 135 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +A+ ++G++ DVV + P GE + ++ V Sbjct: 136 LAQAIVGRKIGDVVQFQAPAGEKKLHIVAV 165 >UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XT30_9BACT Length = 606 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 10/120 (8%) Query: 33 IAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATV 92 IA AR +GDL+EN EY AA+E Q R ++E++L A+ D P V G V Sbjct: 479 IAIARSYGDLRENHEYKAAKEMQKILMRRKAELESELVRARGTDYLN-PKTDAVSIGTIV 537 Query: 93 TVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEV 152 V +L+S + + I+G ++D ++N+IS +P+A+ L+ ++ PG EV++E+ Sbjct: 538 KVTDLNSSHIEHFNILGAWDSDPEKNVISYLAPLAQSLLNRK---------PGEEVDYEM 588 >UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L6P4_EXISA Length = 152 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 4/151 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +L + L L+ R + + AR+ D +E+ Y A Q E I ++ Sbjct: 5 LTETGHHQLTDRLVMLRR-ERTDARERLRTARKFCDFREDVTYTEAVRQYERIEADILEL 63 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 L +A +++ + + V FG V + + +E + YRIV + EAD ++ ISV SP Sbjct: 64 NHLLDDATIVESVQ---SEVVTFGNRVVIREVQQEETERYRIVSEAEADLERGSISVTSP 120 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + R L+G + ++TPGG ++ EV+ +E Sbjct: 121 LGRRLMGATMGQTIQVETPGGTIQVEVLHIE 151 >UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae RepID=C6WVB7_METML Length = 168 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 2/116 (1%) Query: 42 LKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDE 101 LK A+ A+++ E ++ + A+L +A ++D TK + V+FGAT+ V + + Sbjct: 53 LKLTADDTFAKDKVAEIERDLRYVRARLDSAILVDPTKQSHE-TVLFGATIEVED-GAGA 110 Query: 102 EQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 + T+ IVG+DEAD N +S SP+A+ L+G++ D V + P G + E++ + Y Sbjct: 111 QHTFHIVGEDEADASINKVSWVSPLAKSLLGQKVGDTVTWQRPAGNINLEILDIHY 166 >UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Z7_9BACT Length = 609 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q + ++ EK + E D L + + PE + I AR +GDL+EN E+ AA+E Q R Sbjct: 452 QTLIVSWESMEKKKAEYDDLVNKKIPENVKEIQVARSYGDLRENFEFKAAKEMQRVLSRR 511 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + E L+ A+ D P+ +V G VT+ Y I+G + D + ++S Sbjct: 512 RAETERDLAQARGTDFAN-PDTAQVSVGTIVTLKETGDGRTDVYTILGAWDGDPDKGIVS 570 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 S +A+ LIG + + V + T G+ + K+E Sbjct: 571 YQSALAQALIGHKPGEQVNVPTEHGDRTARIEKIE 605 >UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2 Tax=Cystobacterineae RepID=Q1CX76_MYXXD Length = 167 Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 2/95 (2%) Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 +++ A L + +V++ GRV FGA V + + D + YRIVG DE+D K +SV Sbjct: 72 QELAAVLEDVRVVE-PDASQAGRVFFGAWVELEDEDGGPVR-YRIVGPDESDVKAGRLSV 129 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+AR L+GKE + VV+ P G VE+ V V+Y Sbjct: 130 ESPLARALLGKEVGESVVVDRPRGPVEYTVTAVDY 164 >UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia mucilaginosa RepID=D2NP88_9MICC Length = 189 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 13/143 (9%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 ++L +EL++L R EI+ IA+AR+ GDL+EN YHAAR++Q E RIK ++ L Sbjct: 39 DRLTQELEYLSGPYRQEIVDRIAQARDEGDLRENGGYHAARDEQAKNEARIKQLKHLLET 98 Query: 72 AQVIDVTK---MPNNGRVI----FGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 A + D + +G VI G T+ L L S E + G D + S S Sbjct: 99 AHIGDTPADDGVVEHGMVIEAEVAGRTLKFL-LGSREIEDTLPAGSD-----LKVFSEKS 152 Query: 125 PIARGLIGKEEDDVVVIKTPGGE 147 P+ ++G ++ D V P G+ Sbjct: 153 PLGAAIMGAKQGDEVTYTAPNGK 175 >UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus RepID=C7T958_LACRG Length = 165 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 4/150 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G L++E+ LK++R P I +AEA GD ENAEY AA+ + EGR++ + Sbjct: 7 ITPAGLANLKQEVADLKAIR-PAKIKNLAEAAALGDRSENAEYSAAKRELRQLEGRLRYL 65 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + + A+ VT G VT+ D +E TY +VG EA +++NSP Sbjct: 66 DKLIRYAK---VTTPAAANLADIGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSP 122 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 + + D V + P G + V+ + Sbjct: 123 LGAAVRRHHVGDTVTVTAPSGTYQVTVMAI 152 >UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium RepID=B2V1C0_CLOBA Length = 155 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T +KL+EEL++ +V+R EI A HGD ENAEY A + RI+ Sbjct: 4 TLTEENMKKLQEELEYRLTVKRAEIAKEKLVAAAHGDRSENAEYKEACANYRENDNRIQY 63 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +S A VID T++ + I + + ++ D+E +V + D + LIS+ S Sbjct: 64 LMTMISTATVIDDTEIDKSSLGI-NSKARIKFVEDDDEDVITLVTTMDLDPENMLISIES 122 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 + + L+GK+ + V ++ PG + +++++ Y Sbjct: 123 DLGKALMGKKAGETVEVEAPGAKYTVKILEILY 155 >UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0F0_ACIFD Length = 160 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 2/142 (1%) Query: 14 LREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 73 L +EL+ L + R EI AI AR GDL EN +YHAA++ QG E RI+ I+ L +A+ Sbjct: 14 LVQELEELTTQGRIEIAKAIEAARALGDLSENGDYHAAKDAQGKMEARIRQIQQILQSAR 73 Query: 74 VIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGK 133 V+ +P + V G V + D+ + Y + +E ++S SP+ L+G Sbjct: 74 VVS-ADLPTD-EVRPGVVVGLRYEGEDDVEHYLVGSIEERHPGLEVVSPTSPLGEALLGA 131 Query: 134 EEDDVVVIKTPGGEVEFEVIKV 155 V + P G ++ +V+++ Sbjct: 132 RVGAWVEYEAPRGTLKVQVVEI 153 >UniRef50_A2VH02 Transcription elongation factor greA (Transcript cleavage factor greA ) (Fragment) n=1 Tax=Mycobacterium tuberculosis C RepID=A2VH02_MYCTU Length = 110 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 3/93 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T ++L+ ELD L + RP I A I + RE GDL+EN YHAARE+QG E R Sbjct: 5 QVTWLTQESHDRLKAELDQLIA-NRPVIAAEINDRREEGDLRENGGYHAAREEQGQQEAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTV 94 I+ ++ LSNA+V + K +G + G+ V V Sbjct: 64 IRQLQDLLSNAKVGEAPKQ--SGVALPGSVVKV 94 >UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium hafniense RepID=B8G0E1_DESHD Length = 138 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 73/137 (53%), Gaps = 15/137 (10%) Query: 21 LKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKM 80 + +V R ++ I + RE G K N +Y +KD+E +L+ A V+ K+ Sbjct: 7 ITAVDRERLLKLINKEREFGSAK-NKDY-------------LKDLEHELNGADVVPSEKI 52 Query: 81 PNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVV 140 P N + + + + +L++ EE Y +V ++AD ++ IS+ +P+ ++G E D++ Sbjct: 53 PGNA-ITMNSRILLKDLETGEETVYTLVYPEDADLLEDKISILAPVGTAILGYLEGDIID 111 Query: 141 IKTPGGEVEFEVIKVEY 157 K PGG V F+V K+ Y Sbjct: 112 WKVPGGVVRFKVEKILY 128 >UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPW8_9ACTO Length = 166 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 7/148 (4%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 ++L+ ELD L + RP I A I RE GDL+EN YHAARE+QG EGRI ++ L Sbjct: 19 DRLQAELDELIA-NRPAIAAEINARREEGDLRENGGYHAAREEQGKQEGRILYLKELLRT 77 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI--SVNSPIARG 129 AQV + P+ V G VT+ D ++ ++G E L S S + + Sbjct: 78 AQVGEA---PSADTVSPGMVVTIYFDDDTDDTETFLLGSREISSTTELTVYSPESALGKS 134 Query: 130 LIGKEEDDVVVIKTP-GGEVEFEVIKVE 156 ++G V P G +++ V++ E Sbjct: 135 ILGTRPGQTVTYTAPSGADIKVTVVRFE 162 >UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized associated domain n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVF3_METI4 Length = 614 Score = 62.4 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 1/135 (0%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 E+ ++ELD L + PE IA AR +GDL+EN EY AA+E Q R ++E+ +S Sbjct: 461 EQKKKELDELVRKKIPENSKDIAHARSYGDLRENHEYKAAKEMQVVLMRRKAELESMISR 520 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI 131 A+ D + + + V G V+ +L ++ + I+G +++ + +IS + + L+ Sbjct: 521 ARATDFSNV-DTTTVNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYLAAFGQSLL 579 Query: 132 GKEEDDVVVIKTPGG 146 G + DV+ + G Sbjct: 580 GHKTGDVLQVSLEDG 594 >UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QK34_9SPHI Length = 171 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 2/105 (1%) Query: 54 QQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDE-EQTYRIVGDDE 112 Q G+I + +++ A+V+++ P + V FGATVT+ + + + +Q IVG DE Sbjct: 66 QLALLNGQIAALNQRIATAKVVNMQDHPLD-EVRFGATVTLSSQSTGKADQQLTIVGVDE 124 Query: 113 ADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 AD I+ +PIAR L+GK+ D + ++TP GE E+ + Y Sbjct: 125 ADAIHGRIAFPAPIARLLLGKKVGDFITLRTPRGENALEITSIYY 169 >UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes RepID=C4ZAT8_EUBR3 Length = 167 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +K+ +E+++ K V R + + + AR GDL EN EY AA++ + E RI+ + Sbjct: 5 LTANDIKKMEDEIEYRKLVVRKKALDDVKVARAQGDLSENFEYKAAKQFKNQNESRIRYL 64 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E + A VI + + V TV V D DE +TY+IV + +NLIS SP Sbjct: 65 EKMIKTAVVI--SDESKDDEVGMFNTVDVYFEDDDETETYKIVTTVRGNSLKNLISKESP 122 Query: 126 IARGLIG 132 + + G Sbjct: 123 LGAAIFG 129 >UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X3W9_FLAB3 Length = 183 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 61/98 (62%), Gaps = 1/98 (1%) Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 R++ + ++++A++ID ++ + G V FGATVT NL+++ QT+++VG DEA+ + Sbjct: 87 ARLQLLNGRMASAKIIDTARL-SQGEVHFGATVTFKNLNNNLRQTFQLVGVDEANISKGK 145 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 ++ +P+A+ LI + + V ++ FE++ + Y Sbjct: 146 LAFTTPLAKALINSKVGEKVTLQLGDKTNIFEILSIGY 183 >UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTE2_TERTT Length = 126 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 2/93 (2%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++ +L++A V+D + GRV FG+ VTV ++D +EEQ+++IV DE+ + L+ Sbjct: 31 ELRTRLASATVVDNDDIMG-GRVQFGSLVTVFSIDEEEEQSFQIVSSDESLSGRGLLDQR 89 Query: 124 SPIARGLIGKEEDDVV-VIKTPGGEVEFEVIKV 155 SP+A+ L G E +VV V+ G ++EV + Sbjct: 90 SPLAQALFGAREGEVVRVLLQNGSNCDYEVTHI 122 >UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms RepID=C6B1R3_RHILS Length = 160 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 14/125 (11%) Query: 35 EAREHGDLKENAEYHAAREQQGFCEGR-IKDIEAKLSNAQVIDVTKMPNNGR---VIFGA 90 +ARE D E R +Q R ++ + A+L AQ+ MP+ V FG+ Sbjct: 45 QAREAYDAASPIEDVNERRRQAASPLRDLRYLTARLRTAQL-----MPSPTSIDTVAFGS 99 Query: 91 TVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEF 150 TVT D QTYRIVG+DEAD K IS SP+AR L+GK D+V GG+ E Sbjct: 100 TVT-FRRDDGRVQTYRIVGEDEADPKAGSISYVSPVARLLMGKAVGDMVET---GGQ-EL 154 Query: 151 EVIKV 155 E+I + Sbjct: 155 EIIAI 159 >UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQI1_9GAMM Length = 166 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 4/116 (3%) Query: 14 LREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 73 L EE K RR E++ A++ A GD ENAEY +++ + RI+ ++ ++ + Sbjct: 48 LAEEQGLWK--RRREVVKALSAAAAEGDRSENAEYIYRKKELREIDRRIRYLQKRIPELK 105 Query: 74 VIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARG 129 V++ + P+N + +F A L + YRIVG DE D + + IS++SP+ G Sbjct: 106 VVE--QPPSNRQQVFFAAWVTLEDEQGVTHRYRIVGPDEIDHQADYISMDSPLGAG 159 >UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas RepID=Q4K5S3_PSEF5 Length = 197 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 7/119 (5%) Query: 38 EHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNL 97 E DL ++A+ +++ E ++ +L +AQV VT + +V G+ VT + Sbjct: 84 EQNDLGDDAD----KQRMAELERDLRYFTQRLHSAQV--VTTANSTDKVQIGSRVTFAD- 136 Query: 98 DSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + D +Q+ ++VG+D+AD + LI+ SP+ R L+G + D V+ + P G E+I++E Sbjct: 137 EQDRQQSVQLVGEDQADAAKGLINWASPLGRALLGAQPGDEVLWQRPAGNQLIEIIRIE 195 >UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5G0_9BACT Length = 698 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 75/128 (58%), Gaps = 1/128 (0%) Query: 7 TLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIE 66 +++ ++L ELD + +V+ PE A+ AR HGD +EN+E+ AA+E++ F R ++E Sbjct: 542 SVKSHKRLMAELDDIINVQVPENREALKVARAHGDFRENSEFDAAKERRNFLSRRRGELE 601 Query: 67 AKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPI 126 +L+ Q I + + + G+ + + + ++ E++ Y+++G + D ++ +S + + Sbjct: 602 RELTRIQPISLKSVRVEDSAVIGSEIELQD-ENGEKEVYQLLGAWDGDPERRFLSYRTRL 660 Query: 127 ARGLIGKE 134 + ++ ++ Sbjct: 661 GKAVLNRK 668 >UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococcus radiodurans RepID=Q9RRW0_DEIRA Length = 183 Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 8/160 (5%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +P+T G +L+ L+ + RR E + E E + E+ + AA+E G E R Sbjct: 26 QPLPLTPEGLSRLQAALER-EQARREEARRVVQEQMEANE-NESLDLAAAQETLGAVEAR 83 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--- 118 I+++E +L+ A V+ N+GR G+ VT+LN+ E +V EA Sbjct: 84 IEELEDQLARA-VVLAPGAGNDGRAAVGSRVTLLNIGLGRELPLHLVSAAEAAAGPGTSG 142 Query: 119 --LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 L+S SP+ R L+G+ + + + ++ V+ VE Sbjct: 143 VALVSTESPVGRALLGRRAGEEFTVDLGRTQAQYRVLMVE 182 >UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria RepID=B6BTF1_9PROT Length = 164 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%) Query: 75 IDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKE 134 I + K N +V+FGA V +++ ++DE ++IVG+DEAD KQN +S SP+A+ LIG Sbjct: 83 ILIDKHEENNKVLFGAHVILID-ENDEAYKFQIVGEDEADIKQNKLSYVSPLAKELIGSL 141 Query: 135 EDDVVVIKTPGG 146 D VV K G Sbjct: 142 IGDEVVWKRADG 153 >UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK Length = 160 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 5/70 (7%) Query: 86 VIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPG 145 V FG+TVT + D QTYRIVG+DEAD K IS SP+A+ L+GK DV + Sbjct: 95 VAFGSTVT-FSRDDGRVQTYRIVGEDEADPKTGSISFVSPVAKLLMGKSVGDVASV---- 149 Query: 146 GEVEFEVIKV 155 G+ E E+I + Sbjct: 150 GDQELEIIAI 159 >UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEQ9_LEPBA Length = 138 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 57/100 (57%), Gaps = 1/100 (1%) Query: 58 CEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 + ++D+ ++ AQ +D ++P+N V + + + NL+ E + +R+V ++++ Q Sbjct: 30 TDANVQDLLGEIERAQKVDSKQIPSN-VVTMNSVIEIKNLEGIEFKEFRLVYPEDSNLDQ 88 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 N IS+ +PIA IG + DV+ P G F++ +++Y Sbjct: 89 NQISILAPIATASIGYKTGDVIFWNVPDGVYRFQITEIKY 128 >UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas RepID=Q88Q22_PSEPK Length = 165 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 3/94 (3%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ A++ +AQV+ ++ +V G+ V ++ D+EQ ++VG+DEAD LI+ Sbjct: 71 LRYFSARVQSAQVVPAAT--SHSKVQIGSRVRFVDA-QDQEQVVQLVGEDEADAGHGLIN 127 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+ R L+G D VV + P GE EV+++ Sbjct: 128 WGSPLGRALLGAGPGDEVVWRRPVGEQVIEVVEI 161 >UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococcineae RepID=Q83FN6_TROWT Length = 172 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 8/134 (5%) Query: 26 RPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGR 85 R EI I +AR GDL+EN Y AA+E+Q EGRI+ ++ L +A+ V + P Sbjct: 39 RKEIAKRIEQARSEGDLRENGGYSAAKEEQARIEGRIQQLQDLLRHAR---VGQAPKARG 95 Query: 86 VIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL--ISVNSPIARGLIGKEEDDVVVIKT 143 V+ V + E + ++G+ E +L S +S I + ++G +E + K+ Sbjct: 96 VVEPGVVVTARIGGSERRF--LLGNREIAHTSSLATYSESSAIGQAILGLKEGSEIECKS 153 Query: 144 PGGE-VEFEVIKVE 156 P G ++ ++KVE Sbjct: 154 PTGALIKVAILKVE 167 >UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alphaproteobacteria RepID=B0T2S8_CAUSK Length = 161 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 3/66 (4%) Query: 88 FGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGE 147 FG +VT + + QT+RIVG+DEAD Q +S SP+AR L+GK D ++ GGE Sbjct: 96 FGGSVT-FDREDGRRQTFRIVGEDEADPTQGSVSYVSPVARALLGKAVGDTAIVA--GGE 152 Query: 148 VEFEVI 153 VE I Sbjct: 153 VEIIAI 158 >UniRef50_UPI0001746370 transcript cleavage factor/unknown domain fusion protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746370 Length = 627 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 EK + EL+ L V+ P+ I ARE+GDL+EN EY +AR+ Q E +L Sbjct: 470 EKRKIELEELVRVKIPQNKKDIQIAREYGDLRENFEYKSARQHQAVLLRMQSTYERELRR 529 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI 131 A+ D + V G V + ++ + + +T I+G + D Q+++S S +A+ LI Sbjct: 530 ARGTDFVGVSTE-TVGIGTIVDLQDVGTGKTETQTILGAWDGDPDQSILSYLSEMAKALI 588 Query: 132 GKEEDD 137 GK D Sbjct: 589 GKRVGD 594 >UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales RepID=B5EI69_GEOBB Length = 143 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 1/107 (0%) Query: 51 AREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGD 110 AR Q +K++ +L A+V+D +P + + + V + +LDS+EE Y +V Sbjct: 28 ARSTQTRDSKNLKELGEELVRAEVVDPAGIPPD-VITMNSKVCLQDLDSEEELVYTLVFP 86 Query: 111 DEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +EAD IS+ +P+ +IG D + PGG +V K+ Y Sbjct: 87 NEADLASGKISILAPVGTAMIGFRTGDRITWPVPGGMKNLKVKKILY 133 >UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MF39_PARUW Length = 723 Score = 52.8 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 74/136 (54%), Gaps = 2/136 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I T G K+++ + + +V E I AR GDL+EN+E+ A+E++ + Sbjct: 570 EEIWTTEEGYLKIQDRIRQIGTVEVVENAREIEAARALGDLRENSEFKFAQERRARLQSE 629 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 +K + + A++I + + V G+ + +++ ++ Y I+G +AD ++N++S Sbjct: 630 LKTLSEQFGRARIITPDDILTD-EVGIGSVIDLID-SQGQKIRYSILGPWDADPEKNILS 687 Query: 122 VNSPIARGLIGKEEDD 137 +NS A+ +IGK+ D Sbjct: 688 LNSKFAQAMIGKKIGD 703 >UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae RepID=A0M1N1_GRAFK Length = 166 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 52 REQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDD 111 R Q +G+I + +L A+++D P + + FGA V + N S + Q ++IVG D Sbjct: 62 RRAQSLIDGKINLLSERLQTARLLDSKDQPKD-EIRFGARVKLTNETSGQLQEFQIVGVD 120 Query: 112 EADFKQNLISVNSPIARGLIGKE 134 EAD K+ I+ +PIA+ + G++ Sbjct: 121 EADIKKKKIAFVAPIAKAVTGRK 143 >UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostridium acetobutylicum RepID=Q97HP4_CLOAB Length = 158 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 14/146 (9%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +KL+EE ++ +V+R EI EA GD ENAEY AA+E+ R+ I Sbjct: 5 LTKSDYDKLKEEYEYRNTVKRHEIAKKKMEAAAFGDRSENAEYKAAKEEYYHNNRRLGQI 64 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVG-------DDEADFKQN 118 L NA +++ K+ + V G+ + +L + +DE ++V D++ ++ Sbjct: 65 SRLLKNAIIVEEDKIDD--EVNIGSEM-LLKIGADETFKAKLVTTLNISVEDEDIEY--- 118 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTP 144 ISV+SP + L K D + + P Sbjct: 119 -ISVDSPFGKALYKKHVGDSIDVNLP 143 >UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Chlamydiaceae RepID=GREA_CHLPN Length = 722 Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 65/110 (59%), Gaps = 2/110 (1%) Query: 33 IAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATV 92 I +AR GDL+EN+EY A E++ + I+ + +++ A+++ + +V G V Sbjct: 597 IEDARSLGDLRENSEYKFALEKRARLQEEIRVLSEEINRARIL-TKDLVFTDKVGVGCKV 655 Query: 93 TVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIK 142 T L D+ E Y I+G +AD ++S+ S +A+ ++GK+ +DVV+++ Sbjct: 656 T-LKGDAGEVVEYTILGPWDADPDSCILSLQSKLAQNMLGKKLNDVVILQ 704 >UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides RepID=B9KMW2_RHOSK Length = 164 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Query: 52 REQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDD 111 R + E I+ +EA++++A ++D P + V FG VTV + ++ + I G+D Sbjct: 59 RLPEAAAERDIRYLEARIASAILVDPAAQPLD-EVAFGLAVTVED-EAGRRTVWEITGED 116 Query: 112 EADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 EA I+ +P+AR L+G + VV P GEV V + + Sbjct: 117 EAQATARRIAPQAPLARALMGARLGEKVVWTRPAGEVTLTVTGIAH 162 >UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G7_DESAP Length = 154 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 1/101 (0%) Query: 57 FCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFK 116 F + + + L+ A+V++ + P + G + V +LD + +R+V E + Sbjct: 52 FLDDYLNRVRELLARARVVE-GQCPPLPLTLIGCDIRVEDLDRGHSEMFRVVSPYEINPA 110 Query: 117 QNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +S SP+ RGL+ KE V+ ++ PGG + V+ V Y Sbjct: 111 AGHVSFLSPVGRGLLLKEPGQVLAVQAPGGTFRYRVVSVTY 151 >UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria RepID=A0LL17_SYNFM Length = 141 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +E +L A+V+ +P + V + V V +LD+ E Y +V EAD KQN ISV + Sbjct: 40 LEEELRKAEVVAARNIPRDT-VTMNSKVRVKDLDTGIETIYHLVFPGEADVKQNRISVLA 98 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 PI LIG DV+ P G + + ++ Y Sbjct: 99 PIGTALIGYAVGDVIQWNVPAGTKKLRIEEILY 131 >UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNZ9_AKKM8 Length = 615 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 3/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I ++ E ++EL+ L +V+ PE + +R GDL+EN Y A+E + R Sbjct: 457 EPIFVSWESLEARKKELEELVNVKIPENLHNKKISRAEGDLRENGGYQDAKEVEKVLNRR 516 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++E L+ A+ D + + R G VT+ L+ E Y I+G + + +++++S Sbjct: 517 RAELEHALALARGTDFA-VTDTSRAAMGTKVTLQPLNGGEPVVYTILGAWDTNPEKHIVS 575 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVE--FEVIKVE 156 S + + L GK D V I G+ + + + K+E Sbjct: 576 YLSQVGKELTGKSVGDQVKIVPMDGDKKKVYTITKIE 612 >UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11P04_CYTH3 Length = 149 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 1/85 (1%) Query: 73 QVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIG 132 ++++ ++PNN V + VT++ +DS++ +++V D+AD K N IS+ SPIA LIG Sbjct: 56 KLVEPEEIPNN-VVTMHSIVTIVFMDSNKRVEFQLVYPDKADVKNNKISIFSPIATALIG 114 Query: 133 KEEDDVVVIKTPGGEVEFEVIKVEY 157 + D + P G + ++ + Y Sbjct: 115 YQIGDEIEWCVPAGMTKIKIESIAY 139 >UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6F4_9BACT Length = 148 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 7/104 (6%) Query: 57 FCEGR-----IKDIEAKLSNAQVI-DVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGD 110 EGR + + A+ A +I D T MP+ G V V + +LD++E +TY + Sbjct: 24 IAEGRHDRENLARLRAEFDRALIIEDDTAMPD-GVVTLHCEVRLQDLDTNEIETYTLTLP 82 Query: 111 DEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 + AD + + IS+ +PI L+G + D+VV + PGG +++ Sbjct: 83 EHADPEAHRISILAPIGTALLGYQVDNVVTWEMPGGARRLRILE 126 >UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT Length = 597 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 15/152 (9%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT GAE+ R L L RR E++A+ + DL E R + E + + Sbjct: 460 MTAAGAERYRRRLQQLVQ-RRDELLASPDD-----DLPE-------RSELATLERELAQV 506 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 A L A VI + P + V FGA V V + D +++VG++EA ++ L++ SP Sbjct: 507 SAVLQGAIVIRLASPPRD-EVRFGAEVVVED-DRGSRSRFQLVGENEAAPERGLVNWFSP 564 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 + R L G V TP G + V ++ Y Sbjct: 565 LGRALAGARLGQRVEWTTPAGRGAYVVREISY 596 >UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA Length = 731 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 8/105 (7%) Query: 33 IAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATV 92 I AR GDL+EN+EY A E++ +G +K + +L+ A++I + N +V G+ V Sbjct: 609 IEAARSLGDLRENSEYKFALEKRSRLQGELKRLSEQLNRARIITKDDIYLN-QVSVGSIV 667 Query: 93 TVLNLDSDEEQ---TYRIVGDDEADFKQNLISVNSPIARGLIGKE 134 + D E+ TY I+G +AD N++S S A ++G++ Sbjct: 668 EL----EDPEKNVVTYTILGPWDADADTNILSFQSKFAEAMLGRK 708 >UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RDE4_PHEZH Length = 161 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 3/90 (3%) Query: 67 AKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPI 126 A+ +NAQV++ P+ V FG VT D +T +VG+DEA+ Q +S +P+ Sbjct: 69 ARRANAQVVESPADPDE--VAFGTRVT-FRKDGGAPETVELVGEDEAEPAQGRLSWVAPL 125 Query: 127 ARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 AR +IG + V ++T + E++ VE Sbjct: 126 ARAMIGAMPGETVELETRTPAIRLEILAVE 155 >UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZU20_OPITP Length = 143 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 G + ++LS V+D T +P + G+TV + +L+S E +TY +V ++A+ Sbjct: 27 GTPSQLRSELSRGVVVDATALPPTA-IRLGSTVEIEDLESGEIETYTLVLPEQANVDARK 85 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +SV +PI +IG + V TPGG + +V Sbjct: 86 LSVLAPIGTAVIGCLQGAEVAWSTPGGTRRLRIGRVS 122 >UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6 Tax=Thermaceae RepID=Q5SJG6_THET8 Length = 156 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 8/155 (5%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + +T G E+L ++L+ + R E + E E D +++ AA++++ E RI Sbjct: 5 VKLTKAGYERLMQQLERERE-RLQEATKILQELMESSDDYDDSGLEAAKQEKARIEARID 63 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVI-FGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 +E LS A +++ +G VI G+ V + + S E + ++V EA+ + + Sbjct: 64 SLEDILSRAVILE----EGSGEVIGLGSVVELEDPLSGERLSVQVVSPAEANVLDTPMKI 119 Query: 123 N--SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 + SP+ + L+G DV+ + TP G EF V+ + Sbjct: 120 SDASPMGKALLGHRVGDVLSLDTPKGRREFRVVAI 154 >UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deinococci RepID=Q1IZY0_DEIGD Length = 162 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 7/158 (4%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + +T G E+L+ L + R E + E E E+ A+ ++ E RI+ Sbjct: 8 VRLTREGFERLQRTL-AQEQARLAEATRILQEQMETSADNEDTGLEDAKREKLNIEARIE 66 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADF---KQNLI 120 ++E L+ A +I+ N GRV GA VT+ N + + ++V EA I Sbjct: 67 ELEDTLARATLIE--DHENAGRVELGAVVTLNNETTKQTMRVQVVSAPEATVLGGSLPRI 124 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 S SP+ R L+G+++D+ V+ G +V++ V +EY Sbjct: 125 SEESPVGRQLMGRKKDETFVVNLENGKQVKYRVQDIEY 162 >UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum RepID=A6X2G5_OCHA4 Length = 156 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 4/79 (5%) Query: 80 MPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVV 139 +P++ V FG TV + NLD + + + IVG+DEAD IS +P+A L GK DVV Sbjct: 82 VPDSDVVRFGMTVELENLDDGKVRRWTIVGEDEADPSNGKISHVAPVAILLFGKPVGDVV 141 Query: 140 VIKTPGGEVEFEVIKVEYL 158 I VE+E++ ++ + Sbjct: 142 KINN----VEWEIVSLKIV 156 >UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803 RepID=A0LZA7_GRAFK Length = 146 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 34/153 (22%) Query: 15 REELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQV 74 ++E DFLK + ++ A+ H D A + E+ L +A++ Sbjct: 10 KKEYDFLKQI--------MSLAKYHKDTSYKASIYKLNEE--------------LKDARI 47 Query: 75 IDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKE 134 + ++MP + VI ++ + E+TY+IV ++ D ++N ISV +P+ L G Sbjct: 48 LTNSEMPLD--VIRLNSLVTIETPYAVERTYQIVTPEKGDIRKNKISVLAPMGLALFGYA 105 Query: 135 EDDVVVIKTPGGE----------VEFEVIKVEY 157 + D + P GE +E E++K++Y Sbjct: 106 QGDNITWTFPLGESYIKIKEVKQIETEIMKMKY 138 >UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/GreB family n=2 Tax=Aurantimonadaceae RepID=Q1YFK5_MOBAS Length = 158 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 84 GRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKT 143 G FG+ V++ D +Q + IVG DEAD LIS SP+AR LIG+ D+V T Sbjct: 87 GTAQFGSVVSIEREDGRTQQ-FTIVGIDEADPSAGLISYLSPLARSLIGRTVGDIVRAGT 145 Query: 144 PGGEV 148 E+ Sbjct: 146 ADAEI 150 >UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria RepID=A6VVR5_MARMS Length = 137 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 D++ +++ A++++ MP+N V +TVT L S++E + +V +A+ ++ +SV Sbjct: 34 DLQEEINRAEIVEPRDMPDN-IVTMNSTVTFKVLSSEKEFSKTLVYPKDANGAEDTVSVL 92 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVEY 157 +P+ L+G +E D + P G+V ++KV+Y Sbjct: 93 APVGSALLGLKEGDQIDWPKPNGDVLSVVIMKVDY 127 >UniRef50_A6NYB0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NYB0_9BACE Length = 163 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 2/139 (1%) Query: 14 LREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 73 LR EL+ ++ +R E A A GD ENAE+ A + I + L + Sbjct: 23 LRTELESVQ-LRLKEEQDAAQRASAMGDRSENAEWQIANDNIARYTVSIMSLVNTLDTYK 81 Query: 74 VIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGK 133 + P G+V+ G+T+ V++ + +I + K IS +P+ ++GK Sbjct: 82 KFSASYTPT-GKVMVGSTLKVVDRRHNSTLYIKIYPAGLGNAKIGAISTATPLGSAVLGK 140 Query: 134 EEDDVVVIKTPGGEVEFEV 152 V++K P G++ + + Sbjct: 141 TAGTEVIVKAPLGDIPYYI 159 >UniRef50_A4VNK9 Transcription elongation factor n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VNK9_PSEU5 Length = 158 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 11/102 (10%) Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN-- 118 R+ +IE L+ + + + ++GRV GA +L LD D + + +G D A K Sbjct: 60 RLHEIETALAAYRNLQAG-VSSDGRVRVGA---LLCLDHDGAERWFFLGPDAAGLKLQHD 115 Query: 119 -----LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +I+ SP+ +GL+G+E D V ++ G +EV+++ Sbjct: 116 GREILVITARSPLGQGLLGRELRDEVELRVHGQLQRYEVLQI 157 >UniRef50_Q2SLP2 Transcription elongation factor n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLP2_HAHCH Length = 160 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 9/103 (8%) Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL- 119 R+++ EA L++ Q + V A VT+ D E + + VG + A FK L Sbjct: 60 RVREFEAALASYQNTPPKHFTDQDEVAVFALVTLEAEDGSERRLF--VGPEAAGFKFLLD 117 Query: 120 ------ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 I+ SPI L+GK DVV + GE EFE++++E Sbjct: 118 EQEVLVITRRSPIGMKLMGKMVGDVVALVAGNGEKEFEIVEIE 160 >UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=C5S652_CHRVI Length = 171 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + ++EA+L+ A+V+D +MP N V +TV + ++E T +V + D IS Sbjct: 66 MDELEAELARAEVVDPREMPPN-VVSMNSTVRFRVMSTNEAFTLTLVYPKDMDASGGKIS 124 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEV 148 + +P+ L+G D + PGG V Sbjct: 125 ILAPVGSALLGLSSGDEIEWPKPGGGV 151 >UniRef50_A5VFW5 GreA/GreB family elongation factor n=3 Tax=Sphingomonadaceae RepID=A5VFW5_SPHWW Length = 157 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 25/37 (67%) Query: 101 EEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDD 137 +E+ IVGDDEAD L+S +SP+AR LIG E D Sbjct: 102 QEKAVAIVGDDEADPAAGLVSFSSPLARALIGAGEGD 138 >UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GAI2_SORC5 Length = 140 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 50 AAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVG 109 A R + G ++ +E ++ A V+ +P N V + V +++LD++E +V Sbjct: 24 ALRARPGGDSPNLEALEIEIERADVVKPADIPPNV-VTMNSRVELVDLDTEERLCVTVVF 82 Query: 110 DDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 AD K ISV +P+ L+G E D V TP + ++ Y Sbjct: 83 PGNADVKSGRISVLAPMGLALLGCREADEVEWPTPSRTRRLRIERIAY 130 >UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Z69_PSEA6 Length = 128 Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%) Query: 25 RRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNG 84 ++P+II + A DL E EY R + + I+ IE +L A ++ +P N Sbjct: 3 KQPDIIISTA------DLAE-LEYQLERSK--LPDDAIRAIENELDRATIVACKDLPENV 53 Query: 85 RVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTP 144 V G+ VT LDS + T + ++ ++ ISV +PI LIG + +T Sbjct: 54 -VAIGSQVTFKILDSQKVFTKALCLPHDSVKFEDSISVFAPIGSALIGLSTGQCIKWQTQ 112 Query: 145 GGEVEFEVIKVE 156 G+ E+IKVE Sbjct: 113 RGQQSVEIIKVE 124 >UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD Length = 125 Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++A+L A + ++P++ V + + N+ + +E T+++V +EA+ K +SV + Sbjct: 33 LQAELKAATIYTEEELPSD-VVCLKSEARIANVKTGKEFTFKLVMPEEANIKAQKVSVFA 91 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 PI L G D + + P G EF++++V L Sbjct: 92 PIGIALFGYRTGDSINWEMPDGIQEFKILEVNRL 125 >UniRef50_Q0BS89 Transcription elongation factor greB n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BS89_GRABC Length = 164 Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 3/59 (5%) Query: 67 AKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 A+ ++AQ++ T N V FG TV L L TYRIVG+DEAD KQ LIS SP Sbjct: 75 ARRASAQLVP-TAPENAEEVAFGDTVK-LKLGG-RTVTYRIVGEDEADPKQGLISYASP 130 >UniRef50_D0R7I9 Putative elongation factor n=1 Tax=Paenibacillus phage phiBP RepID=D0R7I9_9VIRU Length = 72 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 45/71 (63%), Gaps = 7/71 (9%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREH-GDLKENAEYHAAREQQGFCEGRIKD 64 +T+ G +K++EEL+++ S + PE+ + R+H GD+K+ A E++ F +GRI Sbjct: 5 LTVEGVKKIKEELEYVISSKLPEVEQRLELIRKHGGDIKD------ATEERDFYKGRIPY 58 Query: 65 IEAKLSNAQVI 75 +E L+ A+++ Sbjct: 59 LENMLATAKIV 69 >UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GQE5_9BURK Length = 122 Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++ A L NA+ I +P + V + T++ +S + +A+ + ISV Sbjct: 19 ELNAALDNAEFIKPQDIPAD-VVTMNSLFTIVETESGSTNKLMLCYPSDAEPAKGYISVL 77 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 SP+ L+G++ V TP GE F V+K Sbjct: 78 SPVGASLLGRKAGTVAQWATPNGEQHFAVVK 108 >UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales RepID=C6VSR5_DYAFD Length = 134 Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Query: 69 LSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIAR 128 L+ A V++ ++P G + + V V +++E + IV +AD + IS+ +P+ Sbjct: 40 LNRAVVVEDNELPA-GSIRLNSYVKVRETTTNKEMAFSIVMPKDADIAKQRISILTPMGA 98 Query: 129 GLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 LIG + + V K P G F+++ V Y Sbjct: 99 ALIGLCKGETVEWKMPAGIRRFKILDVWY 127 >UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI Length = 129 Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 + A+LS A ++ + P++ + +TV + + + E IV A+ K+ ISV Sbjct: 34 SLSAELSRAVILSNEEFPSDA-IRLNSTVRIQDESTGEIMELIIVLPQHANIKEKKISVL 92 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +PIA LIG + D V K P G F + +V Sbjct: 93 TPIAAALIGFRQGDAVQWKVPAGLKNFRITEV 124 >UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CMB9_9FLAO Length = 139 Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 11/128 (8%) Query: 33 IAEAREHGDLKE----NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIF 88 + E +E+ LK +A YH A Q I+ + +L +A+++D +M N+ V F Sbjct: 7 LIEKKEYVLLKRYVNLSAHYHDATLWQS-----IQKLLTELDSAKIVDEAEMQNDV-VRF 60 Query: 89 GATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEV 148 + +TV + ++ + ++V E D ++ IS+ +P+ L G E D V + P G Sbjct: 61 HSIITVTS-ENGWSRRVQLVLPPERDVSKDKISILTPMGIALFGYAEGDTVSWEFPSGPK 119 Query: 149 EFEVIKVE 156 + KVE Sbjct: 120 RLRIEKVE 127 >UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria RepID=B9MBQ3_DIAST Length = 135 Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +EA+L A V D MP N V +TV L++ + T +V E D + +SV + Sbjct: 34 LEAELDRADVFDPKDMPPN-VVTMNSTVRFTLLETGKTNTLTLVYPKEMDGSGDKVSVFA 92 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+ L+G D + +P G+V V +++ Sbjct: 93 PVGIALLGLGVGDEFQMPSPTGQVTVRVDAIDF 125 >UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Z9_METFK Length = 138 Score = 38.9 bits (89), Expect = 0.060, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%) Query: 89 GATVTVLN---LDSDE----EQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVI 141 GA V +N L DE E + +V +AD N ISV +P+ ++G DV+ Sbjct: 53 GADVVTMNSRVLLRDEANGHEMSCTLVFPSDADASANRISVVAPLGTAILGYRVGDVIDW 112 Query: 142 KTPGGEVEFEVIKVEY 157 PGG ++ ++K++Y Sbjct: 113 AMPGGVRQYRILKIDY 128 >UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4X0_PELTS Length = 150 Score = 38.9 bits (89), Expect = 0.060, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 35/67 (52%) Query: 86 VIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPG 145 V G+ V + NL E Y IV ++ ++ IS SP+ + L+ K+ D V +K PG Sbjct: 74 VTIGSEVEIQNLSEQEVYKYFIVNPFYSEVREGHISFLSPVGKSLLLKKVGDEVEVKAPG 133 Query: 146 GEVEFEV 152 G +++ Sbjct: 134 GVFRYKI 140 >UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN Length = 137 Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + + A+L+ A +++ ++P + V +TV + +L++DE +TY +V +A+ K+ +S Sbjct: 34 LSGLHAELAVAHIVESEEIPAD-IVTMNSTVRLRDLETDELETYTLVYPQDANIKEGKLS 92 Query: 122 VNSPIARGLIG 132 + +PI ++G Sbjct: 93 ILTPIGTAILG 103 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr... 204 6e-52 UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr... 197 1e-49 UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de... 189 2e-47 UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba... 185 4e-46 UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob... 185 4e-46 UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr... 185 5e-46 UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B... 184 8e-46 UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote... 181 6e-45 UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba... 181 8e-45 UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro... 180 1e-44 UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam... 179 2e-44 UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr... 179 2e-44 UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi... 178 4e-44 UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur... 176 2e-43 UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c... 176 2e-43 UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac... 176 3e-43 UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des... 175 3e-43 UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac... 174 5e-43 UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri... 174 6e-43 UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla... 174 1e-42 UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir... 173 1e-42 UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn... 173 2e-42 UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl... 173 2e-42 UniRef50_UPI00016C498C transcription elongation factor greA n=1 ... 172 4e-42 UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob... 171 5e-42 UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid... 170 1e-41 UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob... 170 1e-41 UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn... 170 1e-41 UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo... 169 2e-41 UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erw... 169 3e-41 UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria... 168 4e-41 UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr... 168 4e-41 UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R... 168 6e-41 UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr... 168 6e-41 UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl... 168 7e-41 UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo... 167 9e-41 UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr... 167 1e-40 UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P... 166 2e-40 UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke... 166 3e-40 UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis... 166 3e-40 UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob... 165 3e-40 UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell... 165 3e-40 UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother... 165 4e-40 UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel... 165 4e-40 UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob... 165 5e-40 UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga... 164 6e-40 UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi... 164 1e-39 UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr... 164 1e-39 UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro... 163 1e-39 UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ... 163 1e-39 UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba... 163 2e-39 UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco... 163 2e-39 UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts... 163 2e-39 UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The... 162 3e-39 UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Ga... 161 6e-39 UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob... 161 7e-39 UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ... 161 7e-39 UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba... 160 1e-38 UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga... 160 1e-38 UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid... 160 2e-38 UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti... 159 2e-38 UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel... 159 3e-38 UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill... 159 4e-38 UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Pro... 158 4e-38 UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac... 158 6e-38 UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu... 158 6e-38 UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter... 158 6e-38 UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut... 156 3e-37 UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx... 155 4e-37 UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr... 155 5e-37 UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom... 154 1e-36 UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ... 153 2e-36 UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob... 153 2e-36 UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc... 153 2e-36 UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi... 152 2e-36 UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba... 152 4e-36 UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh... 151 5e-36 UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr... 151 5e-36 UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro... 151 6e-36 UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur... 151 6e-36 UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De... 151 7e-36 UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ... 151 9e-36 UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom... 150 1e-35 UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The... 150 1e-35 UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel... 150 1e-35 UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Act... 150 1e-35 UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc... 149 2e-35 UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ... 149 3e-35 UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ... 149 3e-35 UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat... 149 4e-35 UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria... 148 4e-35 UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L... 148 4e-35 UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostrid... 148 5e-35 UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mol... 148 6e-35 UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Ba... 147 8e-35 UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc... 147 9e-35 UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chtho... 146 2e-34 UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac... 146 2e-34 UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo... 145 4e-34 UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri... 145 4e-34 UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La... 145 5e-34 UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ... 145 5e-34 UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp... 144 6e-34 UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac... 144 7e-34 UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi... 144 8e-34 UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido... 144 8e-34 UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol... 144 1e-33 UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ... 144 1e-33 UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba... 144 1e-33 UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo... 143 1e-33 UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Hal... 143 2e-33 UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc... 142 2e-33 UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac... 142 3e-33 UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero... 142 4e-33 UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse... 142 4e-33 UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach... 142 4e-33 UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th... 142 4e-33 UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri... 142 5e-33 UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru... 141 6e-33 UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba... 141 6e-33 UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F... 141 1e-32 UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax... 140 1e-32 UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 ... 139 2e-32 UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci... 138 6e-32 UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe... 137 1e-31 UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi... 137 1e-31 UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi... 136 2e-31 UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri... 136 2e-31 UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc... 136 2e-31 UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisp... 136 3e-31 UniRef50_B3DVF3 Transcription elongation factor GreA fused to un... 134 7e-31 UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte... 134 8e-31 UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Acti... 134 8e-31 UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop... 134 1e-30 UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre... 134 1e-30 UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote... 133 1e-30 UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidi... 133 2e-30 UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Ac... 133 2e-30 UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba... 132 3e-30 UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akker... 132 3e-30 UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte... 131 6e-30 UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Co... 130 1e-29 UniRef50_UPI0001746370 transcript cleavage factor/unknown domain... 129 3e-29 UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bi... 129 3e-29 UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Co... 129 3e-29 UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clost... 129 3e-29 UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia m... 129 3e-29 UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomy... 128 6e-29 UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu... 124 1e-27 UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromon... 123 1e-27 UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu... 123 2e-27 UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9... 122 2e-27 UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida... 122 3e-27 UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho... 122 3e-27 UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh... 122 4e-27 UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa... 121 5e-27 UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bif... 121 5e-27 UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur... 121 6e-27 UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobac... 121 6e-27 UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victi... 121 6e-27 UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Ch... 121 1e-26 UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl... 120 2e-26 UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococ... 118 6e-26 UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy... 117 1e-25 UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 T... 116 2e-25 UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse... 114 1e-24 UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer... 114 1e-24 UniRef50_C6UNA6 Putative transcription elongation factor GreA n=... 112 4e-24 UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla... 112 5e-24 UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostrid... 111 8e-24 UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deino... 111 1e-23 UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro... 109 3e-23 UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo... 108 7e-23 UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil... 107 1e-22 UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell... 106 3e-22 UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac... 105 6e-22 UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=unc... 104 1e-21 UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gem... 103 1e-21 UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul... 103 2e-21 UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococ... 103 2e-21 UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T... 102 3e-21 UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta... 100 3e-20 UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag... 99 3e-20 UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte... 99 5e-20 UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul... 98 1e-19 UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac... 98 1e-19 UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax... 98 1e-19 UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap... 96 3e-19 UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu... 96 4e-19 UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi... 96 5e-19 UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi... 90 2e-17 UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro... 90 2e-17 UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu... 89 6e-17 UniRef50_A2VH02 Transcription elongation factor greA (Transcript... 89 6e-17 UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Ter... 86 3e-16 UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, famil... 86 5e-16 UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alph... 83 3e-15 UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/G... 82 6e-15 UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella... 82 7e-15 UniRef50_UPI000190F158 transcription elongation factor GreA n=1 ... 73 3e-12 Sequences not found previously or not previously below threshold: UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deino... 102 3e-21 UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax... 96 5e-19 UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy... 95 5e-19 UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin... 93 3e-18 UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote... 90 2e-17 UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms Re... 88 1e-16 UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T... 86 4e-16 UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,... 86 5e-16 UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltapro... 85 6e-16 UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 T... 85 7e-16 UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom... 85 9e-16 UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 T... 84 1e-15 UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Prot... 83 3e-15 UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobac... 82 5e-15 UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein,... 82 6e-15 UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,... 82 7e-15 UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot... 82 7e-15 UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteoba... 81 1e-14 UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=... 81 1e-14 UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=... 81 2e-14 UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavo... 80 2e-14 UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 T... 80 3e-14 UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actin... 80 3e-14 UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap... 79 5e-14 UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Ta... 78 1e-13 UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharo... 78 1e-13 UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycob... 77 1e-13 UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteob... 77 1e-13 UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain... 77 1e-13 UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methy... 77 2e-13 UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Breviba... 76 4e-13 UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burk... 76 4e-13 UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular... 76 4e-13 UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Brady... 76 4e-13 UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Bruc... 74 1e-12 UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 T... 74 1e-12 UniRef50_C1YJ21 Transcription elongation factor n=3 Tax=Actinomy... 74 1e-12 UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155... 74 2e-12 UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methy... 73 3e-12 UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator p... 73 3e-12 UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n... 73 3e-12 UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Ocean... 72 4e-12 UniRef50_UPI0001AF7314 transcription elongation factor GreA n=1 ... 72 6e-12 UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Ba... 72 7e-12 UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bact... 72 7e-12 UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkh... 72 7e-12 UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizo... 72 7e-12 UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 T... 72 7e-12 UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphin... 72 8e-12 UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxoc... 72 8e-12 >UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria RepID=GREA_BAUCH Length = 158 Score = 204 bits (521), Expect = 6e-52, Method: Composition-based stats. Identities = 116/158 (73%), Positives = 146/158 (92%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M IPMTLRGAE+LREEL++LK+VRRPEII IAEARE+GDLKENAEYHAAREQQGFCEG Sbjct: 1 MNQIPMTLRGAEQLREELNYLKNVRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI++IE+KLS+AQ+IDVTK+ +G+V+FG TV+V NL+ +EEQTYRIVGDDEA+FK NLI Sbjct: 61 RIQEIESKLSHAQIIDVTKLFPSGKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S++SPIARGLIGK++ D+V+IKTP GEV+++++K+EYL Sbjct: 121 SISSPIARGLIGKKKGDIVLIKTPRGEVKYQILKIEYL 158 >UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria RepID=GREA_ALHEH Length = 158 Score = 197 bits (501), Expect = 1e-49, Method: Composition-based stats. Identities = 107/157 (68%), Positives = 128/157 (81%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +P+T RGAEKLREEL LK+V RP II AIAEAREHGDLKENAEYHAAREQQ F EG Sbjct: 1 MSKVPLTARGAEKLREELQRLKTVERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI++IE KLSNAQVID + G+VIFGATV +++ DS +E TY+IVG+DEAD KQ L+ Sbjct: 61 RIQEIEGKLSNAQVIDPAAVNAQGKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLV 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SVNSPIAR LIGKEE D+V ++ PGGE E+E+++V Y Sbjct: 121 SVNSPIARALIGKEEGDLVTVQAPGGEREYEIVEVRY 157 >UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon subdivisions RepID=GREA_HELPJ Length = 164 Score = 189 bits (482), Expect = 2e-47, Method: Composition-based stats. Identities = 79/157 (50%), Positives = 107/157 (68%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M PM++ G K+ EL LK V RP I+ I AR HGDLKENAEYHAA+E+Q F E Sbjct: 1 MNKEPMSMHGYNKICAELKQLKEVERPNIVKEIDIARGHGDLKENAEYHAAKEKQRFIEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI D+ ++NAQVID + + +N +V FG+T+ +LNLD+D+E +Y IVG E+D + LI Sbjct: 61 RIVDLSEIVANAQVIDPSALAHN-KVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S SPIA+ LIGK + D V I+ P GE +FE++ + Y Sbjct: 120 SFGSPIAKSLIGKSKGDAVSIQLPNGESDFEILDIYY 156 >UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria RepID=GREA_BRUA1 Length = 157 Score = 185 bits (471), Expect = 4e-46, Method: Composition-based stats. Identities = 84/158 (53%), Positives = 116/158 (73%), Gaps = 1/158 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ PMT RG EKL+EEL + + RP II AIAEAR HGDL ENAEYHAA+E Q EG Sbjct: 1 MEKFPMTPRGFEKLKEELRWRQQSERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++E ++ A+VIDV+K+ + R+ FGATVT+++ D++EE+ Y+IVGD EAD K+ I Sbjct: 61 RINELEDLVARAEVIDVSKLTGD-RIKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S++SPIAR LIGK E D + + PGG +E+I ++++ Sbjct: 120 SISSPIARALIGKGEGDTIEVNAPGGSRSYEIIALKFV 157 >UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKN0_DESAH Length = 175 Score = 185 bits (470), Expect = 4e-46, Method: Composition-based stats. Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 1/155 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 + IP+T+ G L+EEL LK++ RP+ I AI AR HGDL ENAE+ AA+++Q F EG Sbjct: 21 LDQIPITIEGYAALKEELQRLKTIERPQNIKAIEIARAHGDLSENAEFDAAKDRQSFIEG 80 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ K+++A++ID + + V F + V + NLDS EE Y IVG +E+D + I Sbjct: 81 RIGELGYKIASAKIIDPATVSKDC-VRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKI 139 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SV+SP+ L+GK+ D +VI+ PGG+ +E++ + Sbjct: 140 SVSSPLGMALLGKQPGDEIVIQAPGGKRNYEIVDI 174 >UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria RepID=GREA_GEOLS Length = 158 Score = 185 bits (470), Expect = 5e-46, Method: Composition-based stats. Identities = 78/156 (50%), Positives = 109/156 (69%), Gaps = 1/156 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 IP+T E L+EEL L RP++I IAEAR HGDL ENAEY AA+ +QGF EGR Sbjct: 3 NNIPLTKESYEALQEELKRLIREERPKVIQDIAEARSHGDLSENAEYDAAKNRQGFIEGR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++++ KL+ A V+D+T + + +V+FGATVT+ + S+EE TY+IVG+DEAD K IS Sbjct: 63 IQELQGKLARAHVVDLTGLKPD-KVVFGATVTLYDTASEEEITYKIVGEDEADIKLGKIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+ + LIG + DD V +K P G E+E+I+++Y Sbjct: 122 CTSPVGKALIGHKLDDSVKVKVPAGTKEYEIIEIKY 157 >UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria RepID=GREA_ANASK Length = 166 Score = 184 bits (468), Expect = 8e-46, Method: Composition-based stats. Identities = 88/158 (55%), Positives = 118/158 (74%), Gaps = 1/158 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 MQ +PMT G +L++EL LKSV RP+I+ IAEAR HGDL ENAEYHAA+E+Q EG Sbjct: 1 MQRVPMTKGGLVRLKDELRRLKSVERPKIVKEIAEARAHGDLSENAEYHAAKEKQSHIEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI +E +++A+VIDVTK + RV+FGATV++ + +S ++ TYRIVG+ EAD KQ I Sbjct: 61 RIAQVEHWIASAEVIDVTKHAGD-RVVFGATVSLEDAESGDQVTYRIVGELEADLKQGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 SV SPIAR LIG+ E D VV+++PGGE E+E+ V ++ Sbjct: 120 SVTSPIARALIGRSEGDTVVVRSPGGEKEYEIQSVAFV 157 >UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria RepID=Q1H0G6_METFK Length = 165 Score = 181 bits (460), Expect = 6e-45, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 92/156 (58%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T G +L++E + L V RP++++ +A A +GD EN +Y +++ + R Sbjct: 4 QKNYITPEGYARLKDEFEQLYKVERPKVVSDVAWAASNGDRSENGDYIYGKKRLRQIDSR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ + ++ A V+D + + ++ FGA V + ++D D E YRIVG DE D + IS Sbjct: 64 LRFLMKRMDIAVVVDPAQQQDLEKIYFGAWVELYSIDKDSEHHYRIVGQDELDPGKGYIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+AR L+GK+ DV+ ++TP GE FE++ V Y Sbjct: 124 WISPLARALLGKQPGDVIRVETPAGEERFEIVDVSY 159 >UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria RepID=GREA_LISW6 Length = 160 Score = 181 bits (459), Expect = 8e-45, Method: Composition-based stats. Identities = 72/154 (46%), Positives = 100/154 (64%), Gaps = 1/154 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMTL G KL EL LK+V+R E++ I AR GDL EN+EY +A+++Q F EGR Sbjct: 5 KVFPMTLEGKAKLENELQELKTVKRKEVVERIKIARSFGDLSENSEYDSAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I IE + NAQ+ID + +NG V G TVT + L EE+TY IVG EAD + IS Sbjct: 65 ITTIENMIRNAQIIDAAE-AHNGLVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +SPIA+GL+G +E + V I+TP G++ ++ K+ Sbjct: 124 NDSPIAKGLLGHKEGEEVTIQTPAGDMNVKIEKI 157 >UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria RepID=GREA_AZOC5 Length = 157 Score = 180 bits (457), Expect = 1e-44, Method: Composition-based stats. Identities = 83/157 (52%), Positives = 113/157 (71%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ IPMT G L EEL F + V RP II+AI+EAR HGDL ENAEYHAA+E Q EG Sbjct: 1 MEKIPMTGAGFVALEEELRFRQQVERPRIISAISEARAHGDLSENAEYHAAKELQSLNEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++E K+S A+VIDV+K+ + V FGATVT+++ D++EE+ ++IVGD EAD K I Sbjct: 61 RIAELEDKISRAEVIDVSKLSGD-IVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+AR LIGK++ V + TP G FE+++V + Sbjct: 120 SISSPVARALIGKKKGSSVEVVTPKGARSFEIVEVRW 156 >UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria RepID=GREA_VESOH Length = 159 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 85/157 (54%), Positives = 111/157 (70%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M IP+T GA+ L L LK V RP II I AR HGDLKENAEYHAA+E+Q F EG Sbjct: 1 MNNIPVTAFGAKALEAALLKLKDVSRPRIIEDIRIARAHGDLKENAEYHAAKEEQSFVEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK+IE KLS Q+IDVTK+ +GR +FG T+T++N + E TY+IVG+DEAD + I Sbjct: 61 RIKEIELKLSRMQIIDVTKLSQDGRCVFGTTITLMNSVDNSEITYQIVGEDEADISLDKI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S +SPIA L+G EE D V++K P G++ ++++ VEY Sbjct: 121 SCHSPIASALMGNEEGDKVIVKAPKGDIVYKILSVEY 157 >UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria RepID=GREA_PSEPK Length = 160 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 91/156 (58%), Positives = 117/156 (75%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 PMT++GA L EE FL RP + AI EARE GDLKENAEYHAARE+QG E RI Sbjct: 5 KYPMTVQGARALEEEHLFLSKTERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARI 64 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 +DIE +L N+ VIDVT +P+ G+VIFG TV + N ++DEE TY+IVG+DEAD KQ +S Sbjct: 65 RDIEGRLQNSVVIDVTTIPHTGKVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSS 124 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 +PIAR +IGKEE D VV+KTP G VE+E+++V+++ Sbjct: 125 GAPIARAIIGKEEGDTVVVKTPSGTVEYEIVEVKHI 160 >UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKY5_HALO1 Length = 169 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 77/156 (49%), Positives = 102/156 (65%), Gaps = 1/156 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 PMT G ++ +L LK V RP AI AR HGDL ENA+Y AA+E+QG E RI Sbjct: 4 KFPMTPSGHAWMKAQLKKLKEVDRPANAKAIEVARGHGDLSENADYDAAKEEQGMIEARI 63 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 ++ EAKL+ ++VID TK+ RV FGATVTV ++D+ +E TY IVG+ EAD K ISV Sbjct: 64 REYEAKLALSEVIDPTKLSGE-RVKFGATVTVEDIDTGDEATYTIVGEHEADIKNKRISV 122 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 +P+AR LIGK D ++TP G FE++ V++L Sbjct: 123 TAPVARALIGKAIGDETQVQTPKGTRAFEIVDVKWL 158 >UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate division OP8 bacterium RepID=Q2Z001_9BACT Length = 156 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 72/157 (45%), Positives = 104/157 (66%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ P+T G +KL EL L+ V RP + AI EAR HGDL+ENA++ A+++Q G Sbjct: 1 MERYPITPEGLKKLEAELKRLREVDRPANVKAIEEARGHGDLRENADFKCAKDEQAMIVG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ ++S+A VID +K+ N RV+FGA V + NLD+ E YR+VG+DEAD +Q I Sbjct: 61 RIAYLQGRISHAAVIDPSKLSGN-RVVFGARVFLKNLDTGEPIVYRLVGEDEADIEQGSI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S+ SP+ARGLI +E + I P G FE++K+E+ Sbjct: 120 SITSPLARGLIRREVGEQAKIAVPSGIKSFEIVKIEF 156 >UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms RepID=GREA_BACCR Length = 158 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 69/155 (44%), Positives = 98/155 (63%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMT G +KL EL+ LK+VRR E++ I AR GDL EN+EY AA+++Q F EGR Sbjct: 5 KTYPMTQEGKQKLENELEQLKTVRRKEVVERIKIARSFGDLSENSEYDAAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E + NA +I T + V G TVT L + +E+ Y IVG EAD + IS Sbjct: 65 ITQLENMIRNAVIIKDTGEVST-VVTLGKTVTFKELPNGDEEAYTIVGSAEADPFEGRIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +SPIA+ L+GK+ + V I+TPGGE++ E++ V+ Sbjct: 124 NDSPIAKSLLGKQIGEKVTIQTPGGEMQVEIVSVK 158 >UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AU03_RUBXD Length = 154 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 89/151 (58%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G KL+EEL +L VRR E+ I +ARE GD+ EN+EY A+ +QG E RI ++ Sbjct: 1 MTPEGFAKLQEELKYLTEVRRKEVAERIRQAREFGDISENSEYDDAKNEQGLLERRISEL 60 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + +L NA+++D G V G VT+ + E+T++IVG +EAD +S SP Sbjct: 61 QRRLRNAKIVDPASSAEEGAVDLGTRVTLRVVGDGRERTFQIVGANEADPASGKLSHASP 120 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + + L+ + + V + TP G E+E++ VE Sbjct: 121 VGKALLRRRVGEKVRVSTPRGATEYEIVSVE 151 >UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae RepID=GREA_DESVH Length = 163 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 74/158 (46%), Positives = 112/158 (70%), Gaps = 2/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +IP+++ G ++L +ELD LK RP +I AI EARE GDL ENA Y AARE+QG E Sbjct: 1 MSSIPISVEGFKQLEKELDRLKK-ERPGVIQAIKEAREEGDLSENAGYDAARERQGMLEA 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK IE++++ VID+ + + +V+FGATV + +L+S EE+ Y ++G DEAD+ + I Sbjct: 60 RIKYIESRMAQFNVIDLDTISGD-KVMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 SV SP+AR ++GKEE D +V+ P G++ +E++ + +L Sbjct: 119 SVQSPVARAMLGKEEGDEIVVDAPRGKIHYEIVSIRFL 156 >UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli RepID=GREA_OENOB Length = 162 Score = 174 bits (443), Expect = 5e-43, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMT G KL+ ELD L + +RP I + I EAR GDL EN+EY +A+++Q F EGR Sbjct: 5 KTYPMTAEGLAKLQAELDDLITNKRPAITSRIQEARSFGDLSENSEYQSAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 +K ++ + AQVID + N V G ++ + +E+TY IVG E+D IS Sbjct: 65 VKQLQQMIQFAQVIDASSASKN-VVTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTP-GGEVEFEVIKVE 156 +SP+ + L+ + D V I P V E++ V Sbjct: 124 NDSPMGKALLDHKTGDKVEIPLPENHSVTVEILHVS 159 >UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia RepID=GREA_RICCK Length = 162 Score = 174 bits (443), Expect = 6e-43, Method: Composition-based stats. Identities = 77/155 (49%), Positives = 108/155 (69%), Gaps = 1/155 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 P+T +G +KL EL LK V R +I IAEAREHGDL ENAEY AARE+Q F EGRI Sbjct: 4 KFPITAKGFKKLEHELKHLKHVERKKISEDIAEAREHGDLSENAEYEAAREKQAFIEGRI 63 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 K++E + A++ID++K+ + + FGATVT+++ D++E+ TY +VG+ EAD + +S+ Sbjct: 64 KELEDMAARAEIIDISKLSGDN-IKFGATVTLIDDDTEEKVTYIVVGEYEADITRKRVSI 122 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SPIA+ LIGK D V + TP G +EV++VEY Sbjct: 123 ASPIAKALIGKSVGDFVEVTTPKGSKSYEVVEVEY 157 >UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae RepID=GREA_RHOBA Length = 159 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 103/157 (65%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++++PMT G K++ E++ +++ P I+ IAEARE GDLKENAEYHA RE QG Sbjct: 2 VESVPMTREGYNKIKAEINRMENEEMPMIVQKIAEAREEGDLKENAEYHAQRENQGMLMA 61 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +I ++ K++ A +IDV+ +P + V+FG TVTV ++ +E+ + +VG + D+ I Sbjct: 62 KINELRDKIARASIIDVSSLPKD-EVVFGCTVTVEDVAYGDEEQFTLVGAGDEDYDSGKI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V SP +GL+GK+ + + P G+++F+++K+E+ Sbjct: 121 LVTSPFGQGLVGKKVGETAEVDVPAGKLKFKILKIEF 157 >UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R891_9PLAN Length = 164 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 1/154 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 IPMT G KL+ ELD +++V P+I IA+AR GDLKENAEYHA RE QG + +I Sbjct: 5 IPMTREGYAKLKAELDRMENVDMPDITQKIADARAEGDLKENAEYHAQREAQGLLQAKIN 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 I KLS A +ID + MP + +V FG TV V ++D DEE+ + +VG E D+ I + Sbjct: 65 LIRNKLSKASIIDPSTMPRD-QVSFGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILIT 123 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+ + L+GK+ DVV + P G + E++ +++ Sbjct: 124 SPLGQALVGKKIGDVVDVPAPKGSYQLEILTLKF 157 >UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus aciditrophicus SB RepID=GREA_SYNAS Length = 161 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 68/155 (43%), Positives = 101/155 (65%), Gaps = 1/155 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ +P+T G E L++EL+ LK V P I I AR HGDL ENAEY AA+E+Q F G Sbjct: 1 MEKMPITKSGFENLKKELEHLKCVLIPANIKDIEIARAHGDLSENAEYTAAKEKQSFLHG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +++++E L+ + VID+ KM ++ R++FGATV + + ++ Y++VG E++ +N I Sbjct: 61 KLQELENNLALSNVIDL-KMLSDDRIVFGATVIIEEASTGKQTNYQLVGPFESNISENKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SV SPI + LIGK D V + TPGG FEV+ + Sbjct: 120 SVTSPIGKALIGKSIGDEVKVHTPGGIRNFEVVDI 154 >UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia RepID=GREA_CLOB8 Length = 160 Score = 173 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + MT G +KL EL++LK+V+R EI I A +GDL EN+EY A+ Q F EGR Sbjct: 5 KQYVMTYEGVKKLESELEYLKTVKRKEITEKIKIALGYGDLSENSEYDEAKNDQAFTEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E L NA V+D +++P++ V G+ V V + + DEE Y IVG EAD IS Sbjct: 65 IIQLENMLKNAVVVDESEIPSD-IVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ L+GK+ DVV + P G +FE++ + Sbjct: 124 NESPVGNALVGKKVGDVVEVTVPDGVNKFEILGIS 158 >UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C498C Length = 161 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 64/154 (41%), Positives = 98/154 (63%), Gaps = 1/154 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 IPMT G +KL+ ELD L+ EI +A AR+ GDL ENAEYHAARE QG + RI Sbjct: 5 RIPMTREGYDKLKVELDRLRGAEMIEITKRVAAARDLGDLSENAEYHAAREDQGILQARI 64 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + +LS A ++D + +P + V FG+ V VL++D DEE+T+ +V + + + I Sbjct: 65 DALSDRLSRAVIVDTSNLPKD-TVAFGSKVRVLDVDVDEEETFELVSPGQENPDKGRILT 123 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPI +GLIG+++ D V I+ P G ++F+++++ Sbjct: 124 GSPIGQGLIGRKKGDTVEIQVPSGTIKFKILEIS 157 >UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae RepID=D1B0C0_SULD5 Length = 167 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 1/155 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 PMT G +KL +EL LK +RPE + + AR HGDLKENAEYHAA+E+ F + RI Sbjct: 4 KEPMTEYGYKKLTDELSDLKKRQRPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSRI 63 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 ++ +S +QVID + ++ +V FG+T+T+ NL+++EE TY IVG E++ LIS Sbjct: 64 AELSDLVSRSQVIDPSTYEHD-KVRFGSTITLENLETNEEVTYSIVGSTESNPDLGLISY 122 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +SP+++ L+G+ D+ V+IK P G E+ ++ + Y Sbjct: 123 HSPLSKQLMGRCVDEEVMIKLPVGTQEYAILNITY 157 >UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales RepID=Q67JL1_SYMTH Length = 157 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 59/155 (38%), Positives = 97/155 (62%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + ++L G ++L +EL +L++V+R E+ I +ARE+GD+ EN+EY A+ +Q F EGR Sbjct: 4 KEVLLSLDGLKQLEQELLYLRTVKRMEVAERIKQAREYGDISENSEYEDAKNEQAFIEGR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E L NA+VID + V+ G+TV + +L+ +E TY IVG EAD N IS Sbjct: 64 ILVLEKMLRNARVIDEP-VGQQEVVVLGSTVVLRDLEYGDEHTYTIVGTTEADPAHNRIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ R ++G+ VV + P G ++E++ ++ Sbjct: 123 NESPVGRAIMGQRVGTVVAVDAPDGVFKYEIVAIK 157 >UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HT85_CAMUP Length = 161 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 71/157 (45%), Positives = 101/157 (64%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ M+ G EKL EL LK +RP ++ I AR HGDLKENAEYHAARE+Q E Sbjct: 1 MEKEAMSSFGFEKLSAELKDLKDNQRPAVVVEIDVARSHGDLKENAEYHAAREKQALIES 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ LS AQVID + V FG++V +++L+S++E Y +VG E+D ++ I Sbjct: 61 RIAELGGILSRAQVIDPASYEHES-VKFGSSVLIMDLESEKESKYTLVGTCESDLEKGYI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S+ SP+AR ++GK+E D ++ P GE EFE++ V Y Sbjct: 120 SIASPLARAMLGKKEGDEFKVRLPKGESEFEILSVTY 156 >UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=GREA_SYNFM Length = 156 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 68/156 (43%), Positives = 102/156 (65%), Gaps = 1/156 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +P+T G E+L+ EL L+ RP +I AI EAR HGD+ ENAEY AA+E+Q EG Sbjct: 1 MPRVPITKEGFERLKIELQRLQRDERPMVIRAIEEARSHGDISENAEYEAAKEKQAMIEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI+D+ K+ ++++ + +NGR IFG+TV V + ++ E +YR+VG EAD + I Sbjct: 61 RIQDLCQKMGECEIVEPSDN-DNGRAIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SV SP+ + LIGKEE + + ++TP G EV+++ Sbjct: 120 SVVSPLGKALIGKEEGEEIRVQTPKGVRNIEVLEIR 155 >UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia RepID=GREA_NEOSM Length = 159 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 71/157 (45%), Positives = 111/157 (70%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ +P+T G KL+EEL+ L V +P ++AA+A+ARE GDL ENAEYH AR++Q F EG Sbjct: 1 MRKLPITREGYCKLQEELEKLVKVVKPSVVAAVAQARELGDLSENAEYHEARKEQSFVEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +I++++ LS A+VIDV++ RV FGA+VT+ N++S Y+IVG+ E+D K+ I Sbjct: 61 KIRELQLCLSEAEVIDVSQFTGE-RVKFGASVTLENMESKSVLIYQIVGNLESDIKEGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV+SPI + ++ KE ++V I P G+ ++++ VE+ Sbjct: 120 SVSSPIGKAVMNKEVGEIVEIDLPSGKKTYKILGVEF 156 >UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erwinia RepID=D2T9B8_ERWPY Length = 187 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ +T G L++ELDFL RPE+ + A GD ENA+Y +++ + Sbjct: 29 MKTKLITREGYNLLKQELDFLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 88 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R++ + L +++D + +G+V FGA V V N D + + +RIVG DE + + I Sbjct: 89 RVRYLTKCLEQLRIVDYSPQ-QDGKVFFGAWVEVEN-DDGDIKRFRIVGYDEIFGRNDYI 146 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S++SP+AR L+ KE D + TP GE + + + Y+ Sbjct: 147 SIDSPMARALLKKEVGDAATVFTPAGEALWYINDISYV 184 >UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT Length = 160 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 79/157 (50%), Positives = 110/157 (70%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +PMT G EKL+EEL+ LK RP+ I IAEAR HGDL ENAEYHAA+E+QGF Sbjct: 1 MNQVPMTKAGYEKLKEELEKLKHEERPKNIQDIAEARAHGDLSENAEYHAAKERQGFINS 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK++EAK+++A V+ + ++ R+ FGATV ++ LDS EE+ Y +VG +EAD K I Sbjct: 61 RIKELEAKIASAIVV-SSAHQDHSRITFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV+SP+ + LIG E + V I+ P GEV++ + ++ Y Sbjct: 120 SVHSPVGKALIGHSEGETVTIRVPAGEVQYTIAEIFY 156 >UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria RepID=GREA_BUCCC Length = 159 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 86/157 (54%), Positives = 118/157 (75%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 IPMTLRG KL+ EL LK + RP I+ AIA AR+ GDLKENAEYH+ARE+Q FCE R Sbjct: 3 NKIPMTLRGFNKLKSELKKLKYITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +IE KL AQ+ID+TK+P G VIFG+TVTVL + + Y IVGDDEA++K+ IS Sbjct: 63 ICEIENKLLRAQIIDITKIPFKGIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 ++SP++R LIGK+++D++ + TP G +++ + K+EY+ Sbjct: 123 IHSPMSRALIGKKKNDIIKVNTPTGYIKYIIKKIEYI 159 >UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE Length = 231 Score = 168 bits (426), Expect = 6e-41, Method: Composition-based stats. Identities = 49/153 (32%), Positives = 85/153 (55%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T +G +++++EL L RP+I+ + A +GD EN +Y +++ + RI+ Sbjct: 73 YITPQGYQRIKDELLDLIDNERPKIVEIVHWAASNGDRSENGDYLYGKKRLREIDRRIRF 132 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L A+V+D + +V FGATV+ ++ D E+T I+G DEAD QN +S + Sbjct: 133 LTKRLEIAEVVDPAVHAGSDQVFFGATVSYVD-DEGVERTITIMGIDEADSAQNQVSWIA 191 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P++R L+ D V + TP G E++ V Y Sbjct: 192 PVSRALLKARVGDEVALPTPAGVRMLEILDVSY 224 >UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria RepID=GREB_HAEDU Length = 162 Score = 168 bits (426), Expect = 6e-41, Method: Composition-based stats. Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 2/153 (1%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G + L +EL +L RP++ +++EA GD ENAEY + + + RI+ Sbjct: 6 YITRAGWQALDQELKYLWKEERPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRRIRF 65 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L Q+ID G+V FGA + + N + E YRIVG DE D +N IS++S Sbjct: 66 LSKRLEALQIIDYHPQ-QAGKVFFGAWIELEN-NEGEINQYRIVGCDEFDPTKNWISIDS 123 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+AR LIGK DD + ++TP G+ F + K+ Y Sbjct: 124 PVARALIGKCVDDEIEVQTPTGKAVFYINKIWY 156 >UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class) RepID=GREA_CHLAA Length = 157 Score = 168 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 59/155 (38%), Positives = 92/155 (59%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G +L EL++L +V R +I IA A+E GD+ E+ EY A++ Q EGR Sbjct: 4 KPTYLTREGRARLEAELEYLTTVERKQIAERIAAAKELGDISESGEYEDAKKAQALLEGR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++++ LS A+VID + +NG V G++VTV D E+T+ IVG EA+ +Q IS Sbjct: 64 IRELKHLLSRAEVIDEDQ-ASNGEVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ L+GK + V + TP G ++ ++KV Sbjct: 123 NESPLGAALLGKRARNKVTVHTPSGVMKLTILKVR 157 >UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales RepID=GREA_CLOAB Length = 158 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 62/155 (40%), Positives = 90/155 (58%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T +G +KL EEL++LK+ +R EI I A GDL EN+EY A+ Q F EGR Sbjct: 5 KKYVITYKGVKKLEEELEYLKTTKRKEITEKIKVALSFGDLSENSEYDEAKNDQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I IE L NA VID +++ N V G+ V V + DEE + IVG EAD +N IS Sbjct: 65 IAQIENMLKNANVIDESEL-KNDVVSVGSKVMVKDYQFDEEIEFSIVGSAEADPIENKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ LIGK+ D + + P G +++++ ++ Sbjct: 124 NESPVGSALIGKKVGDEIEVNVPDGVDKYKILAIK 158 >UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria RepID=GREA_SPHWW Length = 158 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 79/158 (50%), Positives = 106/158 (67%), Gaps = 3/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ +PM G + L EEL LK+ RP II AI EAR HGDL ENAEYHAA+E+QG E Sbjct: 4 IEKLPMLAEGQKMLTEELARLKA-ERPLIIDAIEEARAHGDLSENAEYHAAKERQGQIEA 62 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 I DIE +LS AQVID + + + +++FGATVT+L+ D ++ Y+IVG EAD K I Sbjct: 63 SIADIEDRLSRAQVIDPSMLSGD-KIVFGATVTLLD-DDEKPVRYQIVGQTEADAKTGKI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S NSP+ R LIGK+ DD V + P G+ + V K+E++ Sbjct: 121 SYNSPLGRALIGKKVDDEVEVTVPSGDRFYLVSKIEFI 158 >UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria RepID=GREB_YERPE Length = 171 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 54/153 (35%), Positives = 90/153 (58%), Gaps = 2/153 (1%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G + L EL +L RP + A++EA GD ENAEY +++ + R++ Sbjct: 6 YITREGWQALDRELHYLWREERPVVTQAVSEAAAMGDRSENAEYIYGKKRLREIDRRVRF 65 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L +++D G+V FGA V V N + +E++ +R+VG DE D + IS++S Sbjct: 66 LAKRLEVLKIVDP-DPRQEGKVFFGAWVRVEN-EQEEQRIFRLVGPDEFDPAKKWISIDS 123 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+AR LIGK+ DD V ++TP GE + ++++ Y Sbjct: 124 PVARALIGKQVDDEVTVQTPNGEATYWILEIRY 156 >UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ19_9FIRM Length = 156 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 94/155 (60%), Gaps = 3/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G KL E+L++LKSV+R EI + A GDL EN+EY A+ +Q F EG Sbjct: 4 KQVMLTEEGYNKLVEKLNYLKSVKRIEIAQRLKAAIALGDLSENSEYDDAKNEQAFLEGE 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+D+ AK+ N+ +I K V G+ VTV +++ +E+T+ +VG EAD + IS Sbjct: 64 IQDLTAKIRNSHII---KAGAGDVVQMGSKVTVKDIEFGDEETFMLVGSTEADPDEGKIS 120 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ + L+G++ V+ + P G +++E++ ++ Sbjct: 121 NESPLGQALLGQKSGSVIDVHAPAGIIKYEILDIK 155 >UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae RepID=D1B632_THEAS Length = 164 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + MT G EKL++EL L+ R EI + + EAR GDL ENAEYHAA+E+Q E R Sbjct: 9 EQVIMTREGYEKLKQELASLRGDGRSEIASKLEEARAFGDLSENAEYHAAKEEQEKLESR 68 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E +LS A+V++ + + + V GATV + +LD+ TY +VG +EAD K N IS Sbjct: 69 IMWLEYQLSKAKVVESSDI-DTSTVSLGATVQLRDLDTGNTYTYVLVGSEEADPKANRIS 127 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ + +IG+ E + V+++ P G + ++ Sbjct: 128 AQSPVGKAIIGRAEGEEVIVRVPKGTRHLRIERIS 162 >UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter RepID=Q2N9J5_ERYLH Length = 159 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 P+T G L+ D L RPEI+ ++ A +GD EN +Y R++ + + Sbjct: 7 PITPGGYAALKARYDRLLGTERPEIVEIVSWAAGNGDRSENGDYIYGRKRMREIDRELAH 66 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + ++ +A+VI+ ++ P+ R FGAT+T+ + D D +T +VGDDE D I +S Sbjct: 67 LARRMKHARVIEPSEQPDKDRAFFGATLTLADED-DARKTVTLVGDDEQDASAGKIGWSS 125 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+AR L G D+ + P GE E+EV+ + Y Sbjct: 126 PLARALRGARVGDLRTVHLPSGEREWEVMAIAY 158 >UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms RepID=Q2Y7V5_NITMU Length = 213 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 89/157 (56%), Gaps = 2/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 +T G ++L +E +L + RP++ A ++ A +GD ENA+Y +++ + R Sbjct: 30 SKNYITPEGHKRLMDEFLWLMNRERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRR 89 Query: 62 IKDIEAKLSNAQVIDVT-KMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 I+ + +L A++ID + + R+ FGATVT +N + EE+ IVG +E D + I Sbjct: 90 IRFLTRRLDMAEIIDPSMPREDESRIFFGATVTYIN-EKGEEKIVSIVGVNEIDTTRGYI 148 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S SP+AR L+ E DVV + PGG E E+++V Y Sbjct: 149 SWVSPLARTLLKAREGDVVTLHAPGGTEELEILEVRY 185 >UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus RepID=C1XQ58_9DEIN Length = 159 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G ++L++EL LK+V+R EI AA +A E GDL+ENA Y AR Q + R Sbjct: 5 KPVYLTAEGLKRLQDELTTLKTVKRQEIAAAFEQAIEEGDLRENAGYDEARRAQWDNDRR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E+ L+ A V++ V G +V + D+ + IVG EAD IS Sbjct: 65 ISELESILARAVVVEAGNGTP-LEVGLGVSVELE-TDTGARMSLTIVGSHEADVFNGKIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+ + L+GK+ D V +P G + ++++ Y Sbjct: 123 NESPMGQRLMGKKVGDRVEYPSPKGVQSYTIVELSY 158 >UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms RepID=Q0BR49_GRABC Length = 169 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 1/155 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 + MT G ++ EL L RP+I+ ++ A +GD EN +Y +++ + R+ Sbjct: 12 SFYMTPVGHAQMVAELKQLMREERPKIVEIVSWAAGNGDRSENGDYLYGKKRLREIDRRV 71 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + +L NA VID P+ R+ FGATVT +N +DE IVG DEAD IS+ Sbjct: 72 RFLTKRLENAVVIDPATQPHKDRIYFGATVTYIN-AADETVQVTIVGADEADMALGRISL 130 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ L+G + D V + TP +++ V+Y Sbjct: 131 LSPVAKALLGASKGDEVTVITPVKTEILDILDVDY 165 >UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6T4_SPHTD Length = 157 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 2/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + IP+T G + L++ELD L + RR EI A+ ARE GDL+ENA Y AA+ Q F EGR Sbjct: 4 ERIPITKEGLKALQDELDDLVNRRRVEIAQALQAAREEGDLRENAGYDAAKHDQAFIEGR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++IE L A+VID + V G+TVT+ ++TY IVG EA IS Sbjct: 64 IREIEDILRRAEVIDEAPNGDARVVRLGSTVTIEI--DGAQETYTIVGAVEAKPAAGRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP R L+G E + V I+TP + ++ VE Sbjct: 122 NESPFGRALLGHREGEEVEIQTPAAVLHARIVNVE 156 >UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria RepID=GREB_PSEAE Length = 168 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 2/152 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T GA +LR EL L VRRP++ A++EA GD ENAEY ++ + R++ + Sbjct: 15 ITPEGAARLRAELHELWHVRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRVRFL 74 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L N +V+ + + RV FGA VT+ + D E+ YRIVG DE D + N IS++SP Sbjct: 75 RKRLENLKVV-GERPADPNRVYFGAWVTLEDED-GEQARYRIVGPDELDLRNNQISIDSP 132 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR L+GKE D V+++TP GE + V+++EY Sbjct: 133 LARALVGKELDAEVLVRTPAGEKLWFVVEIEY 164 >UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes RepID=GREA_LEUCK Length = 160 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 63/156 (40%), Positives = 91/156 (58%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMT G +KL+ EL+ L + +RPEI I AR +GDL EN+EY +A+++Q F EGR Sbjct: 5 KVFPMTAEGRDKLQAELEDLITRQRPEITNRIQIARSYGDLSENSEYQSAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++ + NA++ID V G TVT L +E +TY IVG E+D IS Sbjct: 65 ILTLKKMIENAEIIDP-NATAADVVSLGKTVTFKELPDEEPETYAIVGSTESDPLAGKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 S +A L+ K+ D V + P GE ++ E++KVE Sbjct: 124 NESAMAVALLDKKVGDKVSVPLPSGESIDVEILKVE 159 >UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria RepID=GREB_XANCP Length = 168 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 1/152 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +L+ ELD L +RRPE++ A+A A GD ENAEY ++Q G + R++ + Sbjct: 15 ITPEGHARLKAELDELWRLRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYL 74 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L +V+D T + V FGA V + + DS E YRIVG DE D + IS++SP Sbjct: 75 SKRLEALRVVD-TAPTDPQAVFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISIDSP 133 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR L+ K DD + P G+ F V+ VEY Sbjct: 134 LARALLKKRVDDEFEAQLPSGKHTFVVVVVEY 165 >UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNS9_FIBSS Length = 169 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 85/152 (55%), Gaps = 1/152 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 ++ G EK + E + LK V RP +I + A GD ENA Y R + + R++++ Sbjct: 19 ISKEGFEKFKAEWEHLKYVERPAMINQVQAAAAEGDRSENAAYTYGRMRVREIDRRLREL 78 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + L AQ+++ +G + FGATV +++ + E+ Y IVGD E D Q IS+ SP Sbjct: 79 DRILDGAQIVENAA-TKDGSIRFGATVKMIDKKTKREKIYSIVGDKEIDPLQGRISMKSP 137 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 I L GK+ D V ++ P G++ +E+++V Y Sbjct: 138 IGEALQGKKAGDTVEVQAPRGKIVYEILEVNY 169 >UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8 Length = 155 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 4/157 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G +L+EEL+ LK+V+R EI A +A E GDL+ENA Y AR E R Sbjct: 3 KPVYLTPEGYRRLQEELNHLKTVKRQEISADFEQALEEGDLRENAGYDEARRAMWQNEAR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E LS A +++ +V G V + ++ E + IVG EAD IS Sbjct: 63 IAQLEDLLSRAVIVENGSF---DQVALGCQVELE-TETGERLSLAIVGSHEADIFSGKIS 118 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 SP+ + L+GK+ DVV I+ G + +++++ L Sbjct: 119 DESPLGQALLGKKVGDVVEIRGKKGAQVYTILEIKPL 155 >UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria RepID=GREB_NEIMA Length = 163 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 1/154 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G + L++EL L + RPEI+ + A +GD EN +Y + + + RI+ Sbjct: 8 YITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGDRSENGDYLYGKRRMREIDRRIRF 67 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L A V+D +V FGATV +L EQT +IVG DE D QN IS S Sbjct: 68 LTKRLEAAVVVDPELREATDQVFFGATVGLLR-GDGREQTVKIVGIDEIDTAQNKISWIS 126 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 P+AR LI E D VV+ TP G E E++ VEY+ Sbjct: 127 PLARCLIKAREGDEVVLNTPEGREEIEILSVEYI 160 >UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides RepID=A5FRA2_DEHSB Length = 266 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 57/157 (36%), Positives = 93/157 (59%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ IPMT G +KL +EL LK V+R +I + A D++ENA YHAA+EQ+G EG Sbjct: 111 VEKIPMTASGYKKLEDELCILK-VKRIAVIEEMRLAALDKDMRENAPYHAAKEQRGQIEG 169 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK+IE +L +A+V + T N +V G TV + +L + E+ Y +V E + + I Sbjct: 170 RIKEIEHELKHAEVSEYTDN-NTSKVNMGNTVKLRDLKNGEQCIYTLVSPKEIEPLKGRI 228 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S +SPI + L + + D + I+ P G +++ + + + Sbjct: 229 SASSPIGKALFNRSKGDNIEIEVPSGTLQYVIEDISF 265 >UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales RepID=B9KH08_ANAMF Length = 174 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 77/161 (47%), Positives = 113/161 (70%), Gaps = 7/161 (4%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 P+T RG +KL EL+ LKS RP+II +I++ARE GDL ENAEYHAARE+QG E +I Sbjct: 16 RFPITRRGFQKLEAELEALKS-ERPKIIKSISDARELGDLSENAEYHAARERQGLVESKI 74 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTV----LNLDSDEEQTYRIVGDDEADFKQN 118 ++E+K S A+VIDV+++ + V+FGATVTV DS Y+IVG+ EAD +N Sbjct: 75 MELESKRSRAEVIDVSELSGD-TVMFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKN 133 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVE-FEVIKVEYL 158 +IS+ SP+ L+G+ E D V +KTP G+ + ++++K+E++ Sbjct: 134 MISIKSPLVLSLLGRREGDSVEVKTPRGDYKIYQIMKIEFV 174 >UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=GREA_THERP Length = 156 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 2/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + IP+T G E LR+E ++L RRPEI I EAREHGD++ENA Y AA+ Q F EGR Sbjct: 4 ERIPITREGLEALRQEYEYLVKHRRPEIARVIQEAREHGDIRENAAYDAAKHDQAFIEGR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++IE L ++I+ + V G+TVT+ E +TY IVG EA IS Sbjct: 64 IREIEELLKRVELIEQPTDGDRSVVRVGSTVTIEI--DGEIETYTIVGAIEAKPSAGRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ R L+G ++V I+TP G + +I+V+ Sbjct: 122 NESPVGRALLGHRAGEIVPIETPNGTLMARIIEVQ 156 >UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Gammaproteobacteria RepID=GREB_PSEPK Length = 162 Score = 161 bits (409), Expect = 6e-39, Method: Composition-based stats. Identities = 59/157 (37%), Positives = 87/157 (55%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +T G E L++ELD L V RPEI +A A GD ENA+Y ++ + Sbjct: 1 MSTNIITTEGHEALKKELDHLWRVYRPEITQKVAWAASLGDRSENADYQYNKKLLREIDR 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R++ + +L + +V+ + G+V FGA V + N D E +RIVG DE + + I Sbjct: 61 RVRYLRKRLEDVKVVAYS-PEQEGKVFFGAWVEIEN-DEGETMKFRIVGYDEIYGRNDYI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+AR L+ KEE D VV+ TP GE + V + Y Sbjct: 119 SIDSPMARALLKKEEGDEVVVHTPTGEATWYVSSIRY 155 >UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria RepID=A2SJD8_METPP Length = 213 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 1/156 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 +T G +LR EL L RP+++ ++ A ++GD EN +Y +++ + R Sbjct: 54 SKNYITPAGFARLRAELMQLLDDERPKVVETVSWAAKNGDRSENGDYLYGKKRLREIDRR 113 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+ + +L A+V D + + +V FGATVT D E+T I G DEAD Q +S Sbjct: 114 IRFLTKRLEIAEVADPSVHRGSDQVFFGATVTYAAPD-GVERTITIKGIDEADNLQAEVS 172 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+AR L+ D V + TP G EVI+V Y Sbjct: 173 WISPVARALLKARVGDEVTLLTPQGPQTIEVIEVRY 208 >UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3129D Length = 161 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G KL+ EL+ L + +R E+ A I EARE GD+ ENAEY A+ +Q E + Sbjct: 3 KDVILTPDGLAKLKSELEHLSTEKRREVAARIKEAREFGDISENAEYDDAKNEQAMLESK 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E KL A VID ++ V G++V V + S + TY IVG EA+ + +S Sbjct: 63 IAQLEEKLRAATVID-SRSVGTDVVGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 SP+ + LIG++ + ++ P G+ E + K++ Sbjct: 122 NESPVGKALIGRKAGETATVQLPNGKQRELRITKID 157 >UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria RepID=GREA_CHLCH Length = 160 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 67/154 (43%), Positives = 92/154 (59%), Gaps = 2/154 (1%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 I +T G +L+EEL L R E++ IAEAR HGDL ENAEY AARE+Q E RI Sbjct: 4 RIYLTNDGYNRLKEELYVLVHQTRKEVLEKIAEARAHGDLSENAEYDAAREEQSQIEARI 63 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDS-DEEQTYRIVGDDEADFKQNLIS 121 D+E+KLS A ++D ++ +V +V + NLD+ DE Y +V +EAD IS Sbjct: 64 GDLESKLSAATILDPKQI-KTDKVYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 V SP+ R LIGK V I P GE+ +E++++ Sbjct: 123 VRSPVGRSLIGKTVGAKVTIVVPKGELHYEILEI 156 >UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria RepID=A6W1U9_MARMS Length = 196 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 ++ +T GA+ L EL +L +RP + + EA GD ENAEY ++Q + R Sbjct: 38 KSAYITQEGAQALLAELKYLWKEKRPAVTETVREAAAQGDRSENAEYIYGKKQLREIDRR 97 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ +E +L V+D + RV FGA VT+ + ++ + YRIVG DE D + IS Sbjct: 98 VRYLEKRLEVCTVVD-RFPSDQERVFFGAWVTLED-EAGNLKEYRIVGPDELDHHSSYIS 155 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 ++SP+AR L+ K+E D VVI+ GGE + + VEY Sbjct: 156 IDSPVARALLKKQEGDEVVIRLAGGEKTYIIDAVEY 191 >UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales RepID=A8SDG2_9FIRM Length = 161 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 2/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q I M+ G + ++EEL++LK+VRR E+ I EAR HGDL EN+EY A+ QG E R Sbjct: 3 QEIKMSAAGLKAMQEELEYLKTVRRKELAEEIKEARSHGDLSENSEYDEAKNTQGLVENR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E + NA +ID +++ + V G VT+ DE + Y IVG EAD IS Sbjct: 63 ITELEQTIKNAVIIDESELSVDN-VSVGTHVTIRETGEDEAEEYDIVGRTEADAFNGKIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 SP+ L+GK D + P G V + V+ + + Sbjct: 122 DESPVGHALMGKAVGDKAEVLLPTGQTVVYTVLAITH 158 >UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q096W9_STIAU Length = 144 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Query: 14 LREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 73 + EL L +V RP++ A ++ A GD ENAEY +++ + RI+ ++ +L A Sbjct: 1 MHRELLRLLNVERPKVTAEVSAAAAQGDRSENAEYIYGKKRLREIDRRIRFLQKRLDTAT 60 Query: 74 VIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGK 133 ++ + + GRV FGATVT+ + D + TY+IVG DE D + ISV SPI + L+ K Sbjct: 61 IVTPAEQTDQGRVYFGATVTLEDED-GVQTTYQIVGSDEIDTQGGRISVESPIGKALLRK 119 Query: 134 EEDDVVVIKTPGGEVEFEVIKVEYL 158 D V + P GE+E ++ + Y+ Sbjct: 120 AVGDSVEVMRPRGEIELTIVAIAYM 144 >UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEW3_9BACT Length = 154 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 58/152 (38%), Positives = 87/152 (57%), Gaps = 1/152 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 M+ G ++L EL + +V P + AIAEAR+ GDL EN EYHAA+ +QG RI Sbjct: 3 YMSQEGYDELVAELQHMVNVELPAVRDAIAEARDKGDLSENFEYHAAKREQGKLLSRISF 62 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + L NA+VID +++ + V + + + NL + Y IV EAD IS+ S Sbjct: 63 KQKVLENARVIDKSRL-KSDTVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKISIKS 121 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 PIA+ L+GK+ + V++K P G ++F + VE Sbjct: 122 PIAKALLGKKAGEEVMVKVPAGLLKFRLDSVE 153 >UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae RepID=D2RL35_ACIFE Length = 172 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 93/157 (59%), Gaps = 3/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G +KL +ELD+L+S +R ++ + A +GD+ EN+EY A+ +Q F EGR Sbjct: 3 EQTILTEEGLKKLEDELDYLRSEKRQQVAERLKVAISYGDISENSEYDDAKNEQAFVEGR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--L 119 I +E + NAQ+I T + N V G V + ++++ +++ Y +VG EAD Sbjct: 63 ILTLENMIRNAQIIKDTDITKN-VVSLGCKVKIEDMETHDQEEYTVVGTTEADPMAEPPR 121 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IS SP+ + ++G++ VV + TP GE++++++ V Sbjct: 122 ISNESPVGKAILGQKVGAVVKVTTPIGELDYKIVAVS 158 >UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=C5BN87_TERTT Length = 172 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 50/157 (31%), Positives = 88/157 (56%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +T G KL+ ELD+L RPE+ + A GD ENA+Y +++ + Sbjct: 17 MSTPLITEEGLTKLKSELDYLWRTERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 76 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R++ + ++ + +V+ K G V FG+ V + N ++ E + RIVG DE ++N I Sbjct: 77 RVRYLRKRIDSLKVVRYAKE-QEGSVYFGSWVKIEN-EAGENKELRIVGYDEIFGEKNYI 134 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+A+ L+ K+ D ++KT GE +E++++ Y Sbjct: 135 SIDSPMAKALLRKKVGDEAIVKTEVGEFCWEIMEISY 171 >UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD0_FIBSS Length = 151 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 3/151 (1%) Query: 7 TLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG-RIKDI 65 T +KL ++L+ LK+V RP ++ + +AR GDL ENAEYHAA+E+ + + + Sbjct: 3 TQEAYDKLVKDLENLKNVERPRVLQELVDARAQGDLSENAEYHAAKERLASIDNIEMPKL 62 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + +L+ AQVI N+ + FGAT+T NL + E Y++V +EAD IS SP Sbjct: 63 QDQLARAQVIAFDA--NSDTIKFGATITAKNLKTKREIVYQLVSPEEADALNGKISFKSP 120 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 I L+GK+ D V + TP G+ +FE+I + Sbjct: 121 IGAALMGKKRGDTVEVVTPKGKNQFEIIDFK 151 >UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms RepID=Q2G8D8_NOVAD Length = 182 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 P+T G LR D L RP I+ ++ A +GD EN +Y R++ + + Sbjct: 28 PITPAGFAALRARYDHLLGTERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREIDRELAF 87 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + ++ ++V+D + + RV+FGATV + + D + + +VGDDE D + LI ++ Sbjct: 88 LARRMKASRVVDPARQEDRSRVLFGATVEIADEDDNR-KVLTLVGDDEQDASKGLIGWSA 146 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 PIA+ L G D+ +++ P G+ E+E++ + Y Sbjct: 147 PIAKALRGSRVGDLRIVRLPSGQKEWEIMAISY 179 >UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYY1_9FIRM Length = 158 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T +G E+ ++E D L VRR E+ I EA +GDL EN+EY AA+ +Q E R Sbjct: 3 ETVFLTQKGLEEKQKEYDELVGVRRKEVADRIKEATAYGDLSENSEYDAAKNEQAELEER 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E L+N ++ID + V G V + N+ +E+TYRIVG EAD NLIS Sbjct: 63 ISVLEDMLNNYEIID-SNAAKGDVVDLGLNVHLKNITKKKEETYRIVGSAEADPFNNLIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 SPI +GL+ + + V I P G+ V+++++K+ Sbjct: 122 NESPIGKGLLKHKVGETVSIDIPSGKTVKYKILKIS 157 >UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes RepID=C4Z9L9_EUBR3 Length = 185 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G +KL +EL+ LK V+R E+ I EARE GDL ENAEY AA+++Q E R Sbjct: 27 KKNILTYAGLKKLEDELEQLKVVKRKEVSQKIKEAREQGDLSENAEYDAAKDEQRDIEAR 86 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++IE L NA+ + V + + ++ G + +L+ + DEE Y+IVG EA+ + IS Sbjct: 87 IEEIEKILKNAE-VVVEEEVDLDKISIGCKIRILDCEFDEELEYKIVGSTEANSLKGKIS 145 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ + L+GK+ D V ++T GE+ ++V++++ Sbjct: 146 NESPVGKALLGKKVGDTVTVETQVGELTYKVLEIQ 180 >UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales RepID=A7HDS3_ANADF Length = 169 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G +L E + + SV RP+I+A + A GD ENAEY +++ + R Sbjct: 10 KPRYITPEGFRRLASEHERIWSVDRPKIVAEVEAAAALGDRSENAEYVYGKKKLRELDRR 69 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ + ++ V+D P+ GR FGA VT+ + D E +T+R+VG DE D LIS Sbjct: 70 LRFLSERMDALTVVDPRPHPH-GRAFFGAWVTIED-DEGEARTFRLVGPDEFDVAAGLIS 127 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V +P+ R L+GK+E D V+ P GE E ++ V + Sbjct: 128 VEAPLGRALLGKQEGDTVLFLRPAGEAELTIMAVRW 163 >UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8A6_9FIRM Length = 151 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 1/150 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G + L++EL+ LKSV R EI I AR GDL EN+EY A+ +Q E RIK + Sbjct: 1 MTQEGYDALKKELNELKSVTRGEISEKIRVARGFGDLSENSEYDEAKNEQAVVEARIKKL 60 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E +L + ++I+ ++ + V G+ V +L++D DEE Y I E+ IS SP Sbjct: 61 EDQLKHVKIIERDQISTD-VVSVGSRVKILDMDYDEEMVYTIASSVESHNDLESISDESP 119 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 + +GLIG + DVV I P ++ +++++ Sbjct: 120 VGKGLIGHKVGDVVEIHAPAAVLKLKILEI 149 >UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUF3_CHRSD Length = 178 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 2/152 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T RG +L+ + L V+RP + + EA GD ENA+Y +++ RI+ + Sbjct: 25 ITARGYARLKGIHEHLSRVKRPALSTKVGEAAALGDRSENADYTYNKKELNRVIARIRYL 84 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L QV+D + RV FGA VT+ + D EE T RIVG DE D + ISV++P Sbjct: 85 GKRLDELQVVD-RLPADTSRVYFGAYVTLED-DDGEEMTIRIVGHDETDTDKRWISVDAP 142 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +A+ ++GK D+ V + PGG+ + + + Y Sbjct: 143 LAQAMLGKGLDEDVTVNAPGGDTTYIITDIAY 174 >UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CEA Length = 156 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 87/156 (55%), Gaps = 1/156 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M M+ +KL EL+ L +R E+ + AR +GDL ENAEY A+ +Q E Sbjct: 1 MAVKQMSRESYDKLVAELNDLIINKRKEVAERLKVARSYGDLSENAEYDEAKNEQAILEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 I +++ + NA+++D + + + + + +T+ LD+ + +T+ IV + A+ ++ I Sbjct: 61 HIAELQYTIDNAEIVDDSNISVD-EIGMSSKITIKRLDTGKIETFTIVSTNHANVREGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 S SPI + + K DV ++ P GE++FEV+++ Sbjct: 120 SDASPIGKAAMKKRVGDVFIVDAPAGELKFEVVEIS 155 >UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales RepID=Q30T56_SULDN Length = 174 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 94/157 (59%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 MQ PM++ G + L EE FL V +P+ A GD ENA+Y AA+E+ + Sbjct: 1 MQE-PMSIEGYDVLIEEFKFLLEVEKPKTAQEKLVAAALGDRSENADYQAAKEKLRHIDK 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R+ + A + A +ID + + + +V FG++V +L+L+SD+E+ Y I G E++ + LI Sbjct: 60 RLFYLNAMIQKAHIIDPSTLLHT-KVSFGSSVRILDLESDKEEVYTICGVLESEPENGLI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+A+ ++GK D I+ P + E+E++++ Y Sbjct: 119 SIHSPLAQVMLGKRVSDEFKIQLPLMKKEYEILEIYY 155 >UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=GREA_MYCA5 Length = 159 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 1/154 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T ++ +E L +L+ V RP++I I EAR GDL ENAEY AAR++Q E Sbjct: 6 EKIYLTADSFKQYQERLQYLQEVLRPQVIEEIKEARNQGDLSENAEYDAARDKQATIENE 65 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +I+ L N ++I V G+ V+V++L D ++IVG + D IS Sbjct: 66 ITEIQHILDNYEIIKTQTNRQVSVVRIGSNVSVVSLKDDTVINFQIVGALDTDPFNGKIS 125 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+A+ +IG++ +VV ++ P + + +++ V Sbjct: 126 NTSPLAKAVIGRKAGEVVEVEAPN-KYQVKIVHV 158 >UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ08_9BACE Length = 157 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 90/155 (58%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + ++ ++L++EL +LK+VR E+ I EAR GDL EN+EY A+ +QG R Sbjct: 3 KEFKLSPERWKELKDELVYLKTVREKEVADQIKEARSFGDLSENSEYDEAKNEQGKLYSR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E L N VI+ ++ + V G+ + VL+++ +EE Y +VG EAD IS Sbjct: 63 IAEVENILENCVVIE-EEIHDGKTVRLGSKLKVLDVEFNEELDYEVVGSQEADPMNGRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +SP R L+GK + VV++ P G + ++V+ + Sbjct: 122 EDSPFGRALLGKSVGEDVVVEAPAGALHYKVLSIS 156 >UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes RepID=GREA_FLAPJ Length = 158 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 97/149 (65%), Gaps = 1/149 (0%) Query: 7 TLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIE 66 T G +KL++EL+ LK++ RP+ A IAEAR+ GDL ENAEY AA+E QG E +IK +E Sbjct: 8 TAEGLKKLKDELEQLKAIERPKASADIAEARDKGDLSENAEYDAAKEAQGLLELKIKKME 67 Query: 67 AKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPI 126 SNA++ID +++ + ++ + V + N + E +Y +V + EAD K ISV SPI Sbjct: 68 EVYSNARLIDESQLDVSKALVL-SHVKIKNQSNGMEMSYHLVAESEADLKTGKISVTSPI 126 Query: 127 ARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +GL+GK ++ I P G ++FEV+++ Sbjct: 127 GKGLLGKSVGEIAEITVPNGILKFEVLEI 155 >UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides RepID=GREA_DEHE1 Length = 156 Score = 151 bits (383), Expect = 5e-36, Method: Composition-based stats. Identities = 55/157 (35%), Positives = 92/157 (58%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ IPMT G +KL +EL LK V+R ++I + A D++ENA YHAA+EQ+G EG Sbjct: 2 VEKIPMTASGYKKLEDELSTLK-VKRIDVIEEMRLAAMDKDMRENAPYHAAKEQRGQIEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK+IE +L A V + T N +V G+TV + + + E TY +V E + + I Sbjct: 61 RIKEIEHELKYADVSEYTD-TNTSKVNMGSTVKLRDPKNGECCTYTLVSPKEIEPLKGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S +SPI + + + + + + I+ P G +++ + + + Sbjct: 120 SASSPIGKAVFNRNKGEQIEIEVPSGTLQYIIEDISF 156 >UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LES5_SYNFM Length = 155 Score = 151 bits (383), Expect = 5e-36, Method: Composition-based stats. Identities = 51/153 (33%), Positives = 90/153 (58%), Gaps = 1/153 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +P+T G +L EL FL+ V RPE+I + EAR G EN +Y ARE+ + +I Sbjct: 2 KVPITRLGYHRLLRELFFLRHVVRPEVIEELQEARTGGIKIENQQYMLARERHMVLQKKI 61 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 +D+E KL++ +++ V + + FG V + N+++ E Q Y++VG E++ +S+ Sbjct: 62 QDLERKLASCEIV-VGRKFFFKQAEFGTIVVIQNIETGETQRYQLVGPYESNVVDGKLSI 120 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +SP+ R L+G+ E + V++ TP G + V+ + Sbjct: 121 DSPVGRHLVGRREGEEVLVYTPAGVRMYRVVSI 153 >UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=B5ZLJ0_GLUDA Length = 180 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G +R EL+ L RP I+ ++ A +GD EN +Y +++ + R++ Sbjct: 22 YVTPAGMAAMRGELNALLRDERPRIVDIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRF 81 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + ++ A V+D RV FGATVT + + D E+T IVG DE+D +S+ S Sbjct: 82 LTRRIEKAIVVDPAAQTRRDRVFFGATVTYV-TEDDTERTVVIVGVDESDLAAGQVSLAS 140 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+AR L+G D V + TP G E++++ Y Sbjct: 141 PVARALLGGRVGDEVRLLTPAGAEMIEILRIAY 173 >UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H062_UNCTG Length = 158 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 96/156 (61%), Gaps = 3/156 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M I +T G +KL +EL+ L R+P I IA AREHGDL+ENAEY AA+E Sbjct: 1 MSEIYLTREGRKKLIKELNEL-QKRKPLIQDEIASAREHGDLRENAEYCAAKETLANLIR 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ +K++ A++I+ + ++ +V G TVT+ + + + Y IV +EAD N I Sbjct: 60 RIMELTSKIACAKIIEEQNI-DSDKVFIGVTVTIKD-EYGADYQYAIVDLEEADPVANRI 117 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 S+ SP+A+GL+G + V ++ P G+ +F+++K+ Sbjct: 118 SIQSPLAQGLLGHTAGETVAVELPAGKTKFKILKIS 153 >UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales RepID=GREA_DESMR Length = 164 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 62/157 (39%), Positives = 99/157 (63%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M++IP+++ G +L E RP +I AI EARE GDL+ENA Y AARE+QG E Sbjct: 1 MESIPISVEGFRRLERE-LERLKKERPGVILAIKEAREEGDLRENAGYEAARERQGMLEA 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI IE+++S VID+ + +VIFGATV + ++D+ + + Y ++G DEA+ + I Sbjct: 60 RINYIESRMSRFNVIDLATLGGE-QVIFGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S+ SP+ L+GK D +V+ P G++ +E++ + + Sbjct: 119 SLLSPVGLALLGKFVGDEIVVDAPRGKINYEIVSIAF 155 >UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus RepID=Q1J0L4_DEIGD Length = 156 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 62/155 (40%), Positives = 88/155 (56%), Gaps = 4/155 (2%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 IPMT RG +KLRE L++LK+ RR +I + A GDL+E+A Y AR QQ E RI Sbjct: 5 RIPMTKRGYDKLRETLEYLKTTRREQISEYMGSAIADGDLRESAAYDEARMQQSENEARI 64 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 ++E +L AQ+I+ +G GA V V + +E Q + +VG E D + IS Sbjct: 65 LELEDQLERAQIIEEDA---SGGAGLGAKVKVRDEKGNERQ-FELVGTYEVDVLKGKISD 120 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SPI + L GK +V ++ P G +FEV++V Y Sbjct: 121 ASPIGQALSGKRPGQIVTVQLPKGSAKFEVLEVTY 155 >UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZBG3_PLALI Length = 160 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 65/160 (40%), Positives = 98/160 (61%), Gaps = 3/160 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ P++ G +KL+EE+ L+ P+I AIAEAR GDLKENAEYH RE+QG + Sbjct: 1 MELQPISREGYDKLKEEIRKLEHDDMPKIAEAIAEARAEGDLKENAEYHGQREEQGRLQA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN-- 118 RI +++KL++ ++D + +P G V FG VTV N D + + Y VG E D+ + Sbjct: 61 RINSLKSKLASCYIVDKSTLPK-GVVAFGTRVTVKNTDDGDIEKYEFVGPGEEDYMSDVM 119 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 I SP+A L+GK+ +D V I+ P G + +E+ ++E L Sbjct: 120 KILTTSPLASALLGKKVNDKVSIQVPRGTINYEITEIEEL 159 >UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class) RepID=B9KZF4_THERP Length = 156 Score = 150 bits (379), Expect = 1e-35, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 85/155 (54%), Gaps = 3/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T G L +EL+ L+ + P ++ + + GD+ +N+EY +E+ E R Sbjct: 5 RPIVLTPEGKAALEQELEHLRQHKLPLLLERLQQLSNEGDISDNSEYEDTKEELVLTEAR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++IE L AQ+I T+ V G+ VTV++ + +T+ IV +EA+ Q IS Sbjct: 65 IREIEHILRRAQMI--TRAGPQDEVRLGSRVTVIDEE-GSVETWVIVSPEEANAAQGRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + SP+ L+GK V ++ PGGE+ F + ++E Sbjct: 122 IESPVGAALLGKRVGTTVTVRAPGGEMRFTIQRIE 156 >UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae RepID=B7CAB2_9FIRM Length = 162 Score = 150 bits (379), Expect = 1e-35, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 4/159 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G L E + L R E+I + EAR GDL ENA+Y AARE Q EGR Sbjct: 4 EKFYVTQEGYNDLVNEHENLVHKVRQEVIVELQEARAQGDLSENADYDAAREHQAQVEGR 63 Query: 62 IKDIEAKLSNAQVI----DVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 I+++EA + NA++I DV V G+TV +L+L ++E T+ IVG EAD Sbjct: 64 IRELEAMIKNAEIITESADVEDKKKKNVVKLGSTVKILDLSDNQEVTFNIVGTIEADPFN 123 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +S +P+A ++ + DV +K + ++++++ Sbjct: 124 GKLSNTTPLAEVIMDHKVGDVCTVKRVEEPYDVKILEIK 162 >UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Actinomycetales RepID=D2PP26_9ACTO Length = 169 Score = 150 bits (379), Expect = 1e-35, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 9/161 (5%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G ++L+ EL+ LK R EI I+EAR+ GDLKEN YHAA+++QG E R Sbjct: 8 SVVWLTQDGYDQLKSELEHLKGPARAEITQRISEARDEGDLKENGGYHAAKDEQGKIEAR 67 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE-----ADFK 116 I+ +E L A+V + K ++G V G V++ D+ +T+ ++G E Sbjct: 68 IRQLEDMLRRARVGETPK--DDGVVEPGMKVSITFAGDDDVETF-LLGSRELLALDTSVD 124 Query: 117 QNLISVNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 ++ S SP+ ++GK++ D + P G+ V E++ E Sbjct: 125 IDVYSPQSPLGAAIMGKKKGDKATYEAPNGKDVTVEIVAAE 165 >UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCGE Length = 161 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 7/160 (4%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 + +T G ++L +EL+ L V+RPEII + EAR+ GDL ENA+Y AA+ QQG E Sbjct: 3 LNKNYLTQEGFKQLEKELENLIQVKRPEIIRLLQEARDQGDLSENADYDAAKAQQGEIET 62 Query: 61 RIKDIEAKLSNAQVI-DVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 RI +I+ L+NA++I D +V G+TV + + S + Y IVG EA+ +++ Sbjct: 63 RIAEIQDILANAKLISDHQAKTKVTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHK 122 Query: 120 ISVNSPIARGLIGKEEDDV---VVIKTPGGEVEFEVIKVE 156 IS SP+A + G+ D V I+ P +++K+ Sbjct: 123 ISNESPLALAIYGRLIGDECDVVGIEVP---YRVKILKIS 159 >UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJ76_9ACTN Length = 161 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 5/157 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T G +KL EEL FL++ +R E+ I ARE GD+ EN+EY A+ +QG E R Sbjct: 9 NEIVLTPEGKQKLEEELHFLETEKRAEVGERIRVAREFGDISENSEYDDAKNEQGLMEAR 68 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I I LSNA +++ K N RV G+TVTV E+ + IVG EAD IS Sbjct: 69 IAQINDILSNAVLVEAPKRSN--RVNIGSTVTVDM--GGRERVFTIVGAAEADVSSGKIS 124 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 SP+ L+G ++ D + P G +E +++K+E+ Sbjct: 125 NESPVGAALLGGKKGDHFTAEGPTGRVIEMDIVKIEH 161 >UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427C8 Length = 151 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 66/157 (42%), Positives = 96/157 (61%), Gaps = 7/157 (4%) Query: 1 MQAIP-MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCE 59 M + +T G +L++EL+ LK RR EI IAEAR++GDL ENAEY AARE+QG E Sbjct: 1 MNKVYQITEAGKNELKDELETLKG-RRGEIAEKIAEARDYGDLSENAEYDAAREEQGIVE 59 Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 RI +IE L NA +I +G+V G+ V + + + Y +VG EAD + Sbjct: 60 TRIAEIENILQNAAII---TGGVSGQVGLGSVVEL--MTGSKTAVYTVVGPVEADPLEGK 114 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +S SPI L+GK+ DD+V I TP G++E+++I ++ Sbjct: 115 VSNESPIGAALMGKKVDDIVEINTPKGKLEYKIISIK 151 >UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYP5_9BACT Length = 741 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T G EK ++ELD + +++ E + EA GDL+ENAEY AARE+Q + Sbjct: 585 NKIYVTKHGYEKQKKELDNIMNIQFAENARDLGEAISRGDLRENAEYQAAREKQAQLIEK 644 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + ++A L I+ + V G VT+ N D + +TY ++G +AD +N+IS Sbjct: 645 AERLKADLQKIVFIEPYTV-KTNIVSPGTKVTIKNKDKETTETYTLLGPWDADIDKNIIS 703 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPI +GL+ K+ + V I+ P E+ ++IK+E Sbjct: 704 YLSPIGKGLLNKKTGETVTIQLPENEIVCDIIKIE 738 >UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria RepID=B0N6V6_9FIRM Length = 161 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 4/158 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G EKL +E D L +V RP++I + AR GDL ENA+Y AARE+Q E R Sbjct: 4 EKVLLTQSGVEKLEQERDNLINVERPKVIEELQLARSQGDLSENADYDAAREKQAHLESR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSD--EEQTYRIVGDDEADFKQNL 119 IK+I+ L NA+VI +M + V G TVT+L+L E ++Y+IVG E D Sbjct: 64 IKEIDYMLQNAEVISEEQM-DLKVVKPGTTVTILDLSEKDAEPESYQIVGYTETDPLNGK 122 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 IS SP+A+ ++G +++V + + +++ +E+ Sbjct: 123 ISNESPLAKAVLGHGVNEIVTVGV-ADPYDVKIVNIEF 159 >UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus RepID=GREA1_LACPL Length = 156 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 6/158 (3%) Query: 1 MQAIP--MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFC 58 M+ MT G + +E++ LK +RPE I +A A GD ENAEY +A+ G Sbjct: 1 MEPTFNKMTAAGYHAIEQEIEDLKQ-QRPERIRILAAAAALGDRSENAEYSSAKRDLGRL 59 Query: 59 EGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN 118 E R++ + +L AQ++ + +N ++ G VT+ LD ++ TY++VG EA+ +Q Sbjct: 60 ESRLRYLNKQLQYAQIV---QPADNDQLDIGKFVTIEFLDDHDQITYQLVGKQEANLEQQ 116 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IS SPI + L DDVV + P G + +VI V+ Sbjct: 117 KISFTSPIGQALANHTVDDVVTVNAPNGAYQVKVIAVK 154 >UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostridium RepID=B9E669_CLOK1 Length = 157 Score = 148 bits (375), Expect = 5e-35, Method: Composition-based stats. Identities = 57/154 (37%), Positives = 88/154 (57%), Gaps = 2/154 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 MQ + +T G +KL EEL++LK+V+R EI AA+ AR GDL ENA+Y AA+E Q E Sbjct: 4 MQDVILTEAGKKKLEEELEYLKTVKRVEIKAALKAARAQGDLSENADYSAAKEDQSMTET 63 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI+++E +L NA +I+ + + + A V ++D E + +V E+D K I Sbjct: 64 RIQELEYQLKNAVIIESSLETDVFDINRTALVKFYDVD--EVEEVTLVSSVESDVKNMRI 121 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 S+ SP+ + L + D + +P G + EV K Sbjct: 122 SIESPLGKALFRLKVGDKATVISPDGNYDVEVEK 155 >UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mollicutes RepID=GREA_MYCCT Length = 157 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 61/155 (39%), Positives = 90/155 (58%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T G E+L+ EL L V RP++I + EAR GDL ENA+Y AAR +Q E R Sbjct: 3 KEIILTQEGLEELKAELKNLLEVTRPKVIEELVEARNQGDLSENADYDAARNRQAEVEAR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 IK++E ++ A+VID +K + G V G+TV L+ + + +IVG EAD LIS Sbjct: 63 IKEVETLINRAKVIDNSKTHSTGEVKIGSTVEFLSSLDHKTKEIKIVGAIEADPFSRLIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPIA+ ++GK+ D V IK + + ++ Sbjct: 123 NESPIAKAILGKKIGDTVEIKDILKPYKITIKSIK 157 >UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Bacteria RepID=Q12SN9_SHEDO Length = 166 Score = 147 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 3/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ +T G KL EL++L RPEI +A A GD ENA+Y + +G Sbjct: 7 VKTNLITAEGLAKLTHELNYLWREYRPEITKKVAWAASLGDRSENADYKENKRLLRQIDG 66 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFK-QNL 119 R++ + ++ +V+ G+V FGA V + N D ++ +RIVG DE + Sbjct: 67 RVRFLRKRIEALKVV-PYAAEQEGKVFFGAWVEIEN-DEGVKKRFRIVGPDEIYGDAKGY 124 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 IS++SP+AR L+ KE DD + TP GE + + K+ Y Sbjct: 125 ISIDSPMARALLKKEVDDDASVLTPTGEQFWYINKIFY 162 >UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCPU Length = 157 Score = 147 bits (372), Expect = 9e-35, Method: Composition-based stats. Identities = 62/154 (40%), Positives = 91/154 (59%), Gaps = 4/154 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T +K EE L +V RP +I I EAR+ GDL ENAEY AARE+QG E R Sbjct: 5 NKIYLTQETIKKYEEEKWHLINVERPAVILEIKEARQQGDLSENAEYDAAREKQGQIEDR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E LSNA I + ++ ++ G+ V +LN + +E+T++IVG + D QN IS Sbjct: 65 ITELENILSNAISI---QESHSDKIGLGSVVRILNQSTGKERTFKIVGSFDTDPTQNKIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+A+ +IG + DVV I P + +++ V Sbjct: 122 YESPLAKSIIGFSKGDVVEIDAPD-KYTTKILSV 154 >UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Z7_9BACT Length = 609 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q + ++ EK + E D L + + PE + I AR +GDL+EN E+ AA+E Q R Sbjct: 452 QTLIVSWESMEKKKAEYDDLVNKKIPENVKEIQVARSYGDLRENFEFKAAKEMQRVLSRR 511 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + E L+ A+ D P+ +V G VT+ Y I+G + D + ++S Sbjct: 512 RAETERDLAQARGTDFAN-PDTAQVSVGTIVTLKETGDGRTDVYTILGAWDGDPDKGIVS 570 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 S +A+ LIG + + V + T G+ + K+E Sbjct: 571 YQSALAQALIGHKPGEQVNVPTEHGDRTARIEKIE 605 >UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae RepID=C8W826_ATOPD Length = 159 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 3/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T G +KL +EL + + + EI+ I EAR GDL EN+EY AA+E+Q E R Sbjct: 5 KEIVLTPEGRQKLVDELAYREGEKHDEIVERIKEARGFGDLSENSEYDAAKEEQSHNESR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +I LS A+V++ V G TV + + + Y IVG E + ++ IS Sbjct: 65 INEIRQILSVAKVVEGGSKRKV-TVAIGTTVELADAK-GKTTKYVIVGTTETNSLEHKIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKV 155 SP LIG ++ D V TP G+V ++ +I + Sbjct: 123 NESPAGEALIGHKKGDEVEFTTPNGKVKKYTIISI 157 >UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia RepID=GREA_SYNWW Length = 159 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G EKL EL+ LKSV+R E+ I +A GD+ EN+EY A+ +Q F EGR Sbjct: 5 KEVVLTKEGLEKLENELEHLKSVKREEVAERIKQAIAFGDITENSEYEDAKNEQAFIEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E L A++++ + + V G+ +T+ + S E T +V E+ K IS Sbjct: 65 IISLEKTLKKARLMEDEDIRTD-VVSLGSRITLKEMKSGREVTVTLVSSVESKLKDGKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ + ++GK+ V ++ P G +++++IKVE Sbjct: 124 DESPVGKAIMGKKVKSTVSVEAPAGTIKYKIIKVE 158 >UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria RepID=D0J9T5_BLASP Length = 162 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 64/154 (41%), Positives = 100/154 (64%), Gaps = 2/154 (1%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G +KL++E++ L+++ RP+I IAEAR+ GDL ENAEY A +E Q F E I Sbjct: 8 YITKEGLKKLQQEIERLENIERPKISMQIAEARDKGDLSENAEYDAIKEAQEFLEMNIAK 67 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++ KLSNA++ID +++ N RV +TV V NL EQ Y +V + EAD K IS+N+ Sbjct: 68 LKKKLSNARIIDGSQI-NRTRVSILSTVRVKNLTYGGEQIYTLVPEGEADLKSGKISINT 126 Query: 125 PIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVEY 157 PI+ GL+GK+ + IK P + ++E++++ + Sbjct: 127 PISTGLLGKQVGQIAHIKLPNKMILDYEILEIAF 160 >UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae RepID=A5VME9_LACRD Length = 165 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 7/159 (4%) Query: 1 MQAIP---MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGF 57 M+ + MT G ++ E++ L+ +RP I + AR GDL EN EY A+ + Sbjct: 10 MKNVYFQKMTANGYHEIEEQIAKLQQ-QRPAKIEQLKAARALGDLSENTEYSTAKRELRH 68 Query: 58 CEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 E R++ + +L A+++ N+ + G TVT+ D E++TY IVG EAD + Sbjct: 69 LESRLRYLNKQLQYAEIVTP---KNDHTIDLGTTVTIEFEDDHEQETYHIVGKQEADLAK 125 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IS +SP+ + ++ + V ++ P + +++KVE Sbjct: 126 QKISFDSPLGQAILHQTAGTTVTVEAPQSSYKVKIVKVE 164 >UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N7T1_SLAHD Length = 155 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 58/155 (37%), Positives = 88/155 (56%), Gaps = 5/155 (3%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 +T G EKL EL +L++ +R E+ I ARE GD+ EN+EY A+ +QG E RI Sbjct: 5 YVLTPEGKEKLEAELLYLENEKRAEVGERIKIAREFGDISENSEYDDAKNEQGMLEVRIA 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 I L+NA V++ K N RV G+TVTV E+ + IVG EA+ + IS + Sbjct: 65 QINDILANATVVEAPKRSN--RVTVGSTVTVDM--GGRERVFTIVGGAEANAAEGKISND 120 Query: 124 SPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 SP+ L+G ++ D + + P G ++E V+ +E+ Sbjct: 121 SPVGSVLLGSKKGDQLTTEGPTGRKIEITVLNIEH 155 >UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira RepID=C0QWD9_BRAHW Length = 154 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 64/152 (42%), Positives = 95/152 (62%), Gaps = 2/152 (1%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 P+T G +K + +L LK+ + A IAEARE GDLKENAEYHAA+E+QG +I Sbjct: 4 PITKEGYDKAKSKLADLKA-EFETLPAIIAEAREKGDLKENAEYHAAKEKQGLLNAQISK 62 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +E+ L+ ++ID + + V FG V V + + YRIVG+ EAD +N I++ + Sbjct: 63 LESDLAGCEIIDPANLDKD-TVTFGKRVKVKDKSRNAVFEYRIVGELEADMSKNEITIVT 121 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 PIA+GL+GK+ DVV IK P G+ E++++ Sbjct: 122 PIAKGLLGKKIGDVVTIKVPAGDKVLEILEIS 153 >UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RN4_LACBA Length = 132 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 2/133 (1%) Query: 24 VRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNN 83 V+RP++I I AR +GDL EN+EY +A+++Q E RI +E L AQ+ID + Sbjct: 2 VQRPKVIDRIKIARSYGDLSENSEYESAKDEQSMLETRISTVERMLQYAQIIDNDD-TDK 60 Query: 84 GRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKT 143 + G VT D DE + Y IVG EAD IS +SPIA+GL+G + V T Sbjct: 61 DEITVGKKVTFQE-DDDEPEEYTIVGAAEADPMSGKISNDSPIAKGLLGHRVGETVTFPT 119 Query: 144 PGGEVEFEVIKVE 156 PGG++ +VI V+ Sbjct: 120 PGGDMTVKVIAVD 132 >UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira RepID=Q04UP0_LEPBJ Length = 927 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 55/153 (35%), Positives = 91/153 (59%), Gaps = 1/153 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 AI +T R + +EE + L +V PE I EA+E GDL+ENAEY AA E+Q + I Sbjct: 766 AILVTRRALNRKKEEFEHLLNVEMPENSKDIGEAQERGDLRENAEYKAAMERQVQLQAAI 825 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 K +EA++ +A ++D+T + ++ G T + N + E Y I+G +AD ++++IS Sbjct: 826 KRLEAEIKSAIILDLTNV-KTDKINIGVTAKLKNESTGEVVAYSILGAWDADTEKHIISY 884 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+A+ L+GK+ D V+ G E + V+++ Sbjct: 885 QSPLAKSLLGKKVGDAAVLNLTGAETRYTVLEI 917 >UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria RepID=Q01RT9_SOLUE Length = 164 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 60/143 (41%), Positives = 92/143 (64%), Gaps = 1/143 (0%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 +KL++E+ L+ ++ I +AR HGDLKENAEYHAA+++QGF R+ ++++L Sbjct: 6 KKLQDEITALEYELHVDLPKEILKARLHGDLKENAEYHAAKDRQGFVSARLGQLKSRLGQ 65 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI 131 +ID TK+P + + G+TV VL++ SD+E TY +V +EAD +S SPI R L+ Sbjct: 66 LAMIDFTKIPRD-KAGLGSTVVVLDVKSDQEITYHLVTSEEADAPNGKVSTTSPIGRALL 124 Query: 132 GKEEDDVVVIKTPGGEVEFEVIK 154 GK D V + +PGG E E++K Sbjct: 125 GKTVGDEVKVMSPGGVKELEILK 147 >UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter necessarius RepID=B1XUH7_POLNS Length = 168 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 7/164 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +TL G E+++ EL L ++ R E++ + A +GD EN +Y +++ + R Sbjct: 3 EKNYITLAGYERIKTELLQLLNLDRLEVVKVVHWAASNGDRSENGDYIYGKKRLREIDRR 62 Query: 62 IKDIEAKLSNAQVIDVTKMP----NNGRVIFGATVT---VLNLDSDEEQTYRIVGDDEAD 114 I+ + +L A V+D + + +V FGA+VT + ++ + + IVG DE D Sbjct: 63 IRFLNKRLEFAIVVDNSARKSGENDADQVFFGASVTYSALEGPEAGKRTSITIVGVDEVD 122 Query: 115 FKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 ++ +S SPIA+ LI D V I+TP G E E++ V+YL Sbjct: 123 LDKSHVSWVSPIAKALIKSRIGDCVFIQTPTGPTEIEILDVQYL 166 >UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C12 Length = 154 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 4/150 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G + LR EL+ L++V R EI A I ARE GDLKENAEYHAA+E Q E RI + Sbjct: 7 ITQEGLDALRAELEQLETVARREIAARIRTAREWGDLKENAEYHAAKEDQAHLETRILKL 66 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + NA V + + + V FG+TV V + Y +VG EA + +S+ SP Sbjct: 67 RERERNATVTEAS--SDVDIVAFGSTVEVE--TGGKNARYTLVGAAEASARDGKLSIESP 122 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +AR LIG + V ++TP G V++V Sbjct: 123 VARALIGARAGEDVQVQTPSGARILRVVRV 152 >UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2N3_SALRD Length = 164 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 68/155 (43%), Positives = 100/155 (64%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + MT G E+L+EEL LK+ R I IAEAR GDL ENAEY AA+E+QG E R Sbjct: 10 ETVYMTEEGLEELKEELHQLKTEERSRIADEIAEARAKGDLSENAEYDAAKEEQGKLEAR 69 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 IK IE ++ A+++D + + ++ + + VTV NLD+ +EQT+ +V ++EA+ +N IS Sbjct: 70 IKQIEDTIARARIVDESTV-DDSKAYILSDVTVENLDTGDEQTFTLVSEEEANISENKIS 128 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 V+SPI GL+ +EE D V I P G V F++ + Sbjct: 129 VDSPIGEGLLAQEEGDEVSIDVPAGTVHFKIKDIS 163 >UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia RepID=GREA_BORBU Length = 901 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Query: 1 MQAIPMT-LRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCE 59 M+ +T L K ++EL +LK V PE I +ARE GDLKENAEYH+A+E+Q F Sbjct: 741 MEIGFLTILSSLNKKQKELKYLKEVEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLT 800 Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 R+ + ++ NA+VID + + V FG V +LN + ++++Y I+G E++ + + Sbjct: 801 KRLNSLMLEIENAKVIDTKDL-QSSVVGFGTKVVILNEVTGKDESYLILGPWESNPDEGI 859 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 IS SP L+ E D + ++ V K+E + Sbjct: 860 ISYKSPFGENLLDSREGDSLNFVINNTNFKYFVKKIEPI 898 >UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZQ0_HALNC Length = 175 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 7/162 (4%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M ++ RG +L ELD L V R ++ A++EA GD ENAEY + + + Sbjct: 1 MSTAVISARGHARLLAELDQLWRVERRLVVQAVSEAAALGDRSENAEYIYGKRRLREIDR 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI+ ++ +L + +V+ + +V FGA +T+L D D EQT +VG DE D LI Sbjct: 61 RIRYLQKRLGDIKVV-RQPPTDMNKVYFGARITLLYAD-DREQTVCLVGPDEIDPANQLI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGE-----VEFEVIKVEY 157 S++SP+A+ ++GK D VV+ P V E+I +EY Sbjct: 119 SIDSPLAKAVLGKALDAEVVLFLPSETSTPRRVHAEIIAIEY 160 >UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCAP Length = 163 Score = 142 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 3/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I ++ K + E L +V RP + A++ EAR GDL ENAEY AAR++Q E R Sbjct: 7 EKIYLSEETYNKYKNEYTELVTVERPAVQASLKEARAQGDLSENAEYDAARDRQSEVERR 66 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E L NA++ID TK + GATV LN+ +++E I+G +++ +N IS Sbjct: 67 ILELERILENAEIID-TKSAVQNKAGIGATVRYLNMKTNKELVVTIMGPHDSNPIENKIS 125 Query: 122 VNSPIARGLIGK-EEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ ++ DVV ++ P + +V+ + Y Sbjct: 126 NESPVAQAIMEANGIGDVVEVEVPQ-KYNIKVLDISY 161 >UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus RepID=C7T958_LACRG Length = 165 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G L++E+ LK++ RP I +AEA GD ENAEY AA+ + EGR++ + Sbjct: 7 ITPAGLANLKQEVADLKAI-RPAKIKNLAEAAALGDRSENAEYSAAKRELRQLEGRLRYL 65 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + + A+V G VT+ D +E TY +VG EA +++NSP Sbjct: 66 DKLIRYAKVTTPAAANLAD---IGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSP 122 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + + D V + P G + V+ + Sbjct: 123 LGAAVRRHHVGDTVTVTAPSGTYQVTVMAIS 153 >UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPJ1_9BACE Length = 197 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 2/149 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T + + +REELD+ + RP+++ A+ EAR GDL EN EY AA++++ E RI+ + Sbjct: 35 LTRKDLQMMREELDYRRITLRPQLLEAVKEARGFGDLSENFEYKAAKQEKNRNESRIRFL 94 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E + A VI P+ V VTV + DE +TY++V D IS SP Sbjct: 95 ENMIRTAVVISDQAAPDT--VGLYDKVTVYLEEDDETETYQVVTTMRQDALHGRISKESP 152 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 + L+GK D + I+ + VIK Sbjct: 153 VGSALLGKRVGDRIYIQVNDNYGYYVVIK 181 >UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9C2_9ACTN Length = 156 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 5/156 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T G +KL EEL + + EI+ I EAR GDL EN+EY AA+++Q R Sbjct: 4 SQIVLTAEGRQKLVEELAWREGDYAKEIVEDIKEARAFGDLSENSEYDAAKDKQAQNAAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +I+A L+NAQV + V G+TV++++ + E +VG E + ++ IS Sbjct: 64 IAEIQAILANAQV---AATTGDLTVSIGSTVSLIDP-NGEVMEVTLVGTTETNSLEHKIS 119 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 SP+ +IG E D V + TP G+ + + K+ Sbjct: 120 NESPVGHAIIGHGEGDSVEVVTPSGKTRVYTIAKIA 155 >UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae RepID=GREA_ACHLI Length = 158 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 3/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G ++L++EL LK V+R E + A+ EARE GDL ENA+Y AAR +Q E R Sbjct: 5 KVYELTQSGLDQLKDELTHLKDVKRVENLEALKEAREQGDLSENADYDAARNEQARIEAR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +IE+ L N ++I ++ V G V + ++ +++ Y +VG EAD K IS Sbjct: 65 ILEIESILKNVKII--RTNDDSTTVNIGKKVLLHFVEKNKDVEYHVVGTIEADPKNFKIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIK-TPGGEVEFEVIKVE 156 + SP+ R + GKE D+V IK + E+ + Sbjct: 123 IESPLGRAIKGKEVGDLVQIKSATNKQSNVEIKAIS 158 >UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae RepID=GREA_PETMO Length = 159 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 1/156 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T G EKL+ E + LK E+ I EARE GDL EN+EY A+ +QG + R Sbjct: 4 QVYQLTREGYEKLKREREELKKRLMGEVAERIKEARELGDLSENSEYEEAKNEQGMIDSR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 IK+I+ L NA++I+ +N V G V + + + EQ + +V EA+ ++N IS Sbjct: 64 IKEIDYILDNAEIIENGGNHDNSTVSLGKKVKIKDYRLNREQEFVLVTPQEANIEENKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 + SPI R L+G+++ +V+ IKT G + E+ ++ Sbjct: 124 IESPIGRSLLGRKKGEVINIKTARGSSKKIEIKEIS 159 >UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium RepID=B2V1C0_CLOBA Length = 155 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 1/152 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +KL+EEL++ +V+R EI A HGD ENAEY A + RI+ + Sbjct: 5 LTEENMKKLQEELEYRLTVKRAEIAKEKLVAAAHGDRSENAEYKEACANYRENDNRIQYL 64 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +S A VID T++ + + + ++ D+E +V + D + LIS+ S Sbjct: 65 MTMISTATVIDDTEIDKSSL-GINSKARIKFVEDDDEDVITLVTTMDLDPENMLISIESD 123 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 + + L+GK+ + V ++ PG + +++++ Y Sbjct: 124 LGKALMGKKAGETVEVEAPGAKYTVKILEILY 155 >UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia RepID=B1ZZX3_OPITP Length = 616 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + ++ E+ REE + + S + PE AIA AREHGDL+EN+EY A+++Q Sbjct: 456 EQLIVSKASYERKREEYETIVSKKIPENSKAIAAAREHGDLRENSEYKMAKQEQQVLMAH 515 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++E L A++ D + +V G V V ++ TY ++G + D +++ IS Sbjct: 516 KTNLERDLGRARISDFKDASID-QVSVGTVVEVASVKDGHHTTYTVLGAWDGDPEKHFIS 574 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +P L+GK+ DV+ +KT + ++ ++ + Sbjct: 575 YKTPFGAALLGKKTGDVINVKTDASDEDYAIVSIA 609 >UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli RepID=GREA_STRP2 Length = 160 Score = 141 bits (356), Expect = 6e-33, Method: Composition-based stats. Identities = 66/155 (42%), Positives = 96/155 (61%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMTL EKL +EL+ LK VRRPE++ I AR +GDL EN+EY AA+++Q F EG+ Sbjct: 4 KTYPMTLEEKEKLEKELEELKLVRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQ 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E K+ A++++ + + V G TVT+ + DEE+ Y IVG AD +S Sbjct: 64 ISSLETKIRYAEIVNSDAVAQD-EVAIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGKVS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPI + LIGK+ D I+TP G + +++KVE Sbjct: 123 NESPIGQALIGKKTGDTATIETPVGSYDVKILKVE 157 >UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes RepID=GREA_STRPG Length = 160 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMTL E+L +EL+ LK VRRPEI+ I AR +GDL EN+EY AA+++Q F EG+ Sbjct: 4 KTYPMTLTEKEQLEKELEELKLVRRPEIVERIKIARSYGDLSENSEYDAAKDEQAFVEGQ 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E K+ A++ID + + V G TV V + + ++ TY IVG AD IS Sbjct: 64 ISTLETKIRYAEIIDSDAVAKD-EVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPIA+ LIGK+ D V I++P + E+I VE Sbjct: 123 NESPIAQALIGKKTGDKVRIESPAATYDVEIISVE 157 >UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIH5_9BACT Length = 159 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 92/155 (59%), Gaps = 6/155 (3%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G ++L++ ++ L + RPE+I A+A ARE GDL ENAEY AARE+Q + I + Sbjct: 7 ITKTGMQRLQKRINELLA-ERPEVIKAVAIAREFGDLSENAEYKAARERQRAIDNEIDYL 65 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN----LIS 121 + +N +VID ++ P + V FG ++++ E Y +VG +E ++ +S Sbjct: 66 RRRSANLKVIDTSEFPKD-MVRFGTYCVAEDINTKECICYHLVGPEELNYYNEEGIQEVS 124 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + SPI + L+ K+ ++ ++K P GE + ++ +++ Sbjct: 125 IVSPIGKALLSKKIGEIAIVKAPIGERKLKIREIK 159 >UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FB5 Length = 144 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 76/144 (52%) Query: 14 LREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 73 ++ EL L + RPE + I+ A +GD EN +Y +++ + RIK + + +A Sbjct: 1 MQRELSSLIKLDRPETVKVISWAAGNGDRSENGDYIYGKKKLRQIDSRIKFLLTAIEDAD 60 Query: 74 VIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGK 133 ++ + + +V FGA V +L+ S RIVG E + IS SP+A+ LIG+ Sbjct: 61 IVHPSTSIDKKKVYFGANVKLLDEQSKSTLDIRIVGAHEINHNIGNISWLSPLAKALIGR 120 Query: 134 EEDDVVVIKTPGGEVEFEVIKVEY 157 D++ ++TP + ++KV+Y Sbjct: 121 TSSDLIEVQTPMNIKTYIILKVDY 144 >UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9R4_ACIC5 Length = 165 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 87/143 (60%), Gaps = 1/143 (0%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 +KL E++ L+ E+ A I +A GDL ENAEYH A+++Q F R+ ++ +++ Sbjct: 7 KKLLEDIKQLEHELAHELPAEIKKAAALGDLSENAEYHMAKQRQEFVNARLGQLKKRMAE 66 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI 131 ++++ +P++ RV FG+TV V + DE+ Y++V +E+D + LIS SPI R LI Sbjct: 67 LSLVNLANIPHD-RVAFGSTVEVFDTSKDEKIEYKLVTSEESDVSKGLISTTSPIGRALI 125 Query: 132 GKEEDDVVVIKTPGGEVEFEVIK 154 GK+ D + TP G E EV+K Sbjct: 126 GKQVGDTATVVTPSGNRELEVLK 148 >UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9H5_COPPD Length = 163 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 3/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G +K+ EEL +LK V+R E+ I EAR GDL EN+E+ AA+E+Q E R Sbjct: 6 EEAILTEEGYKKILEELKYLKEVKRKEVAEKIQEARALGDLSENSEFEAAKEEQALLEER 65 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVG-DDEADFKQNLI 120 I +E + NA+V+ + + +V G V VL+ + E+++ IVG +E D I Sbjct: 66 IARLETLVYNARVVKAEDLALD-QVSVGTKVLVLDESAGREESFIIVGNSEEVDPFSGKI 124 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKV 155 S SP+ L+G++ D V IK G + +E++ + Sbjct: 125 SSKSPLGSRLLGRKRGDRVEIKLRNGSKAVYEILDI 160 >UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes RepID=C4ZAT8_EUBR3 Length = 167 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 3/152 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +K+ +E+++ K V R + + + AR GDL EN EY AA++ + E RI+ + Sbjct: 5 LTANDIKKMEDEIEYRKLVVRKKALDDVKVARAQGDLSENFEYKAAKQFKNQNESRIRYL 64 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E + A VI + + V TV V D DE +TY+IV + +NLIS SP Sbjct: 65 EKMIKTAVVI--SDESKDDEVGMFNTVDVYFEDDDETETYKIVTTVRGNSLKNLISKESP 122 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEF-EVIKVE 156 + + G + D +K F +++K++ Sbjct: 123 LGAAIFGHKVGDRCEVKVNDDYSYFVKIMKIQ 154 >UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBD2_ELUMP Length = 156 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 58/157 (36%), Positives = 99/157 (63%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ ++ + EKLRE+L LK ++ ++ I EA + GDL+ENAEY AA+ +Q Sbjct: 1 MEKYYLSRKNYEKLREDLTALKEIK-AKLSLEIGEAAQQGDLRENAEYAAAKSRQEETLV 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +I+D+E KL NAQ+ D ++ + GATVTV ++ +D + TY +VG E++ ++ L+ Sbjct: 60 KIQDLEQKLRNAQITDDIQV-DKSEARIGATVTVHDISADIDFTYTLVGSMESNPEKGLL 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV SP+A ++GK+E + P G+ ++++K+EY Sbjct: 119 SVQSPLAVSILGKKEGEEFEAVLPKGKKMYKLVKLEY 155 >UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VBG3_9CLOT Length = 195 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 3/148 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +K+ EE+++ K V R E + A+ EAR GDL EN EY+AA++ + E RI+ + Sbjct: 35 LTESDIKKMEEEIEYRKVVVRKEKLEAVKEARAQGDLSENFEYYAAKKDKNANEKRIRYL 94 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + + A++I + V TV V + +EE TYRIV D +IS SP Sbjct: 95 DRMVRTAEII--KDESADDEVGLNNTVRVYFEEDEEEDTYRIVTTVREDVLNGIISNISP 152 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVI 153 + + L+G + D V + PG F ++ Sbjct: 153 MGKALLGHKVGDRVEV-VPGKGDPFHIV 179 >UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCH7 Length = 160 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 56/153 (36%), Positives = 92/153 (60%), Gaps = 3/153 (1%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 I +T + E++ +EL+ L +V R +I I +AR GDL ENAEY ARE+QG E RI Sbjct: 8 KILLTQQKLEEIEKELEHLINVERVNVIQEIKDARSQGDLSENAEYDVAREKQGIIESRI 67 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 +++E +S A++I + RV G+ V++ N++S E QT++IV +AD ++ IS Sbjct: 68 RELETIISKAKIIKADL--GSSRVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKISN 125 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SPIA+ L+G+ + D V + + +++V Sbjct: 126 FSPIAQALLGQHQGDEVEVDV-NEKYSVRILEV 157 >UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK30_9BACT Length = 693 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 54/152 (35%), Positives = 91/152 (59%), Gaps = 5/152 (3%) Query: 7 TLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIE 66 + R + L+EE + L + P+ AIA AREHGDL+EN E+ AA+++Q + + R+ +++ Sbjct: 537 SQRSYKALQEEHERLVNTEIPDNSKAIAAAREHGDLRENFEFRAAKDRQKYLQLRVGELD 596 Query: 67 AKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPI 126 A L+ D ++ RVI A VT+ + ++ E TY IVG + D +N +S +P+ Sbjct: 597 AMLNKIGPTDFSEFKVKNRVIPAAKVTIKSPEA--ETTYSIVGMLDGDPDKNWLSFETPL 654 Query: 127 ARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 A+ ++G + D I+ PGG+ E E++ VE L Sbjct: 655 AKSMLGHQVGD--SIELPGGD-EAEILAVEPL 683 >UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized associated domain n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVF3_METI4 Length = 614 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 2/154 (1%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + ++ E+ ++ELD L + PE IA AR +GDL+EN EY AA+E Q R Sbjct: 453 LIVSWESLEQKKKELDELVRKKIPENSKDIAHARSYGDLRENHEYKAAKEMQVVLMRRKA 512 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++E+ +S A+ D + + + V G V+ +L ++ + I+G +++ + +IS Sbjct: 513 ELESMISRARATDFSNV-DTTTVNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYL 571 Query: 124 SPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 + + L+G + DV+ + G E + K+ Sbjct: 572 AAFGQSLLGHKTGDVLQVSLEDGITTEIRIDKIS 605 >UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XT30_9BACT Length = 606 Score = 134 bits (338), Expect = 8e-31, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 1/152 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + ++ E+ + E L + P IA AR +GDL+EN EY AA+E Q R Sbjct: 450 LIVSWDSLERRKNEYAELVQKKIPANSKEIAIARSYGDLRENHEYKAAKEMQKILMRRKA 509 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++E++L A+ D P V G V V +L+S + + I+G ++D ++N+IS Sbjct: 510 ELESELVRARGTDYLN-PKTDAVSIGTIVKVTDLNSSHIEHFNILGAWDSDPEKNVISYL 568 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +P+A+ L+ ++ + V + G + F + ++ Sbjct: 569 APLAQSLLNRKPGEEVDYEMDGQKRRFRIDEI 600 >UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Actinomycetales RepID=A0JU41_ARTS2 Length = 164 Score = 134 bits (338), Expect = 8e-31, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 8/155 (5%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T ++L+ ELD L R EI+ I AR+ GDLKEN YHAA+E+QG E RI+ Sbjct: 11 WLTQEAFDRLKAELDHLSGAGRAEIVQKIEAARQEGDLKENGGYHAAKEEQGKIEARIRQ 70 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEA--DFKQNLISV 122 + L +A V + P + ++ + V + DEE ++G E D ++ S Sbjct: 71 LTVLLRDAHVGES---PADDGIVEPGMIVVARIAGDEET--FLLGSREIAGDSDLDVFSE 125 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 SP+ ++G +E D + P G+ + E++ + Sbjct: 126 KSPLGSAIVGHKEGDKLSYTAPNGKDITVEILSAK 160 >UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PP41_CHIPD Length = 157 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 96/151 (63%), Gaps = 1/151 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T +++REEL FLK+ R EI AIAEARE GDLKENAEY AA+E QG E ++ Sbjct: 6 YVTKETLDQMREELSFLKTKGRAEIARAIAEAREKGDLKENAEYDAAKEAQGMHEAKVAI 65 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +E+ ++ A++++ + + +V VT+ N+ + + TY++V + EAD K N ISV S Sbjct: 66 LESAIATARIVEADSI-DTSKVSILCKVTITNMANKKTVTYQLVSEKEADLKLNKISVTS 124 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 PI +GL+GK ++ + P G ++F++ + Sbjct: 125 PIGKGLLGKAVGEIADVHAPNGSLKFKIENI 155 >UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema RepID=GREA_TREPS Length = 162 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 1/153 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + +T + ++EL L VR PE I A E GDL+ENAEY AARE+Q + Sbjct: 7 LVVTAKMLNAKKKELQDLLDVRIPENSREIGRALELGDLRENAEYKAAREEQTRLNNMVT 66 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++ ++ AQV D T + GRV FG +++ N S E++TY I+G E+ ++ +IS Sbjct: 67 RLQEEIERAQVFDPTTVV-AGRVSFGTVISLKNHTSGEDETYTILGPWESAPERGIISYM 125 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ L+ ++ + + E +E++ + Sbjct: 126 SPLGSNLLNRKTGEQLAFTVGEHEKVYEILSIS 158 >UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=Q1H282_METFK Length = 165 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G + L+++ L+ R+P + + A +++ + + Sbjct: 27 PNYVTPHGFKLLQQQASALEQERQPLTMRK--------------DDPAVQQRLAMIDRDL 72 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + ++A+L +A V+D P + V+FGATV V + ++ T+ IVG+DEAD N +S Sbjct: 73 RYLQARLESAIVVDPATQPTD-TVLFGATVEVED-ENGNSHTFMIVGEDEADIATNRVSW 130 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ LIG++ D V P G +E E+I + Y Sbjct: 131 VSPLAKALIGQKIGDSVTWHRPAGNLELEIIAIHY 165 >UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0F0_ACIFD Length = 160 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 2/155 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M + ++ + L +EL+ L + R EI AI AR GDL EN +YHAA++ QG E Sbjct: 1 MSEVEISQATYDALVQELEELTTQGRIEIAKAIEAARALGDLSENGDYHAAKDAQGKMEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI+ I+ L +A+V+ + V G V + D+ + Y + +E ++ Sbjct: 61 RIRQIQQILQSARVV--SADLPTDEVRPGVVVGLRYEGEDDVEHYLVGSIEERHPGLEVV 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 S SP+ L+G V + P G ++ +V+++ Sbjct: 119 SPTSPLGEALLGARVGAWVEYEAPRGTLKVQVVEI 153 >UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Actinobacteria (class) RepID=GREA_SACEN Length = 162 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 5/157 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T ++L+ ELD L RP I A I EARE GDLKEN YHAARE+QG E R Sbjct: 5 QVTWLTQDAFDRLKSELDELVG-NRPVIAAKINEAREEGDLKENGGYHAAREEQGHLESR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE-ADFKQNLI 120 I+ ++ L A+V DV G G+ +TV D DE + + + +E A + Sbjct: 64 IRQLQELLRTAKVGDVPTEA--GVAKPGSVLTVRYDDEDETEKFLLATREEGAHGDLEVY 121 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPG-GEVEFEVIKVE 156 S +SP+ + L+ +E + + P G ++ ++K E Sbjct: 122 SPSSPLGQALLDAKEGETREYELPNGGTMKVTLVKAE 158 >UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDC6_THET1 Length = 159 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 61/158 (38%), Positives = 95/158 (60%), Gaps = 6/158 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T +G ++LREEL+ L++V R +I A I EA+E GD+ E+ EY A+ Q F EGR Sbjct: 5 ERVRLTEQGLKELREELERLRTVERAKISARIREAKEGGDISESGEYEDAKHSQAFLEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--- 118 IK++E L+NA+VID + P G V G+ VTV ++ TY IV EA ++ Sbjct: 65 IKELEKLLANAEVIDRSAQP-AGTVGLGSKVTVE--ENGRTYTYTIVDGAEAGRGRDGEV 121 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IS S + L+G+ D V ++ P G++ F+++ VE Sbjct: 122 RISSKSAVGSALLGRRVGDSVEVEVPAGKLTFKILSVE 159 >UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNZ9_AKKM8 Length = 615 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 3/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I ++ E ++EL+ L +V+ PE + +R GDL+EN Y A+E + R Sbjct: 457 EPIFVSWESLEARKKELEELVNVKIPENLHNKKISRAEGDLRENGGYQDAKEVEKVLNRR 516 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++E L+ A+ D + + R G VT+ L+ E Y I+G + + +++++S Sbjct: 517 RAELEHALALARGTDFA-VTDTSRAAMGTKVTLQPLNGGEPVVYTILGAWDTNPEKHIVS 575 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVE--FEVIKVE 156 S + + L GK D V I G+ + + + K+E Sbjct: 576 YLSQVGKELTGKSVGDQVKIVPMDGDKKKVYTITKIE 612 >UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XEY1_9BACT Length = 170 Score = 131 bits (331), Expect = 6e-30, Method: Composition-based stats. Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 15/153 (9%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T GA++LR EL+ L++ +R + G+ NA+ + I Sbjct: 32 YLTPDGAQRLRAELNRLQAEKRSQTAT--------GEFSGNAQ-----TEMQLVGQHILQ 78 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +E L+ A+++ P +V FGATVTV + +S E YRIVG DE D ++ +S S Sbjct: 79 LEQSLATAEIVPPPPQPWE-QVRFGATVTVRD-ESGNETRYRIVGVDETDIDRDWVSWLS 136 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 PIAR LI + V + P GE + E++ + Y Sbjct: 137 PIARALINARIGERVHFRFPAGEKQLEIVSITY 169 >UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Corynebacterineae RepID=GREA_RHOE4 Length = 164 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 7/159 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T ++L+ ELD L + RP I A I E RE GDLKEN YHAARE+QG E R Sbjct: 5 QVTWLTQESHDRLKNELDQLIA-NRPVIAAEINERREEGDLKENGGYHAAREEQGQQEAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTV-LNLDSDEEQTYRIVGDDEA--DFKQN 118 I+ ++ L++A+V + +G + G+ V V + D + +T+ I +E D K Sbjct: 64 IRQLQELLNSAKVGEAPTQ--SGVALPGSVVKVYYDGDESDTETFLIATREEGARDAKLE 121 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 + S NSP+ L+ + D P G ++ ++ E Sbjct: 122 VYSPNSPLGGALLEAKVGDTREYNLPNGSTMKVTLLSAE 160 >UniRef50_UPI0001746370 transcript cleavage factor/unknown domain fusion protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746370 Length = 627 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 2/155 (1%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 ++ ++ EK + EL+ L V+ P+ I ARE+GDL+EN EY +AR+ Q Sbjct: 461 SLVVSWDSMEKRKIELEELVRVKIPQNKKDIQIAREYGDLRENFEYKSARQHQAVLLRMQ 520 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 E +L A+ D + + V G V + ++ + + +T I+G + D Q+++S Sbjct: 521 STYERELRRARGTDFVGV-STETVGIGTIVDLQDVGTGKTETQTILGAWDGDPDQSILSY 579 Query: 123 NSPIARGLIGKEEDDVVVIKTPG-GEVEFEVIKVE 156 S +A+ LIGK D + T G + +++ + Sbjct: 580 LSEMAKALIGKRVGDEAELPTDTHGTRKVKIVSIR 614 >UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bifidobacteriaceae RepID=B8DTJ6_BIFA0 Length = 160 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 7/159 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T +K++EEL + R EI IA AR GDL EN Y AARE+Q EGR Sbjct: 6 KVVLLTQEAYDKMKEELAHREGEYRDEITERIAAARAEGDLSENGGYQAAREEQSKNEGR 65 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDD-EADFKQNLI 120 I ++ KL NA++I+ P G V G+ VT+ E Y I D ++I Sbjct: 66 INELIVKLRNAKIIEA---PKAGEVGNGSLVTIEL--GGNEMQYVIGSRDITVATDYDVI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEYL 158 S SPI +IG + DVV K P G E+ + + E L Sbjct: 121 SPESPIGGAIIGHKVGDVVTYKAPNGREISVTIKESEPL 159 >UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Corynebacterineae RepID=GREA_MYCVP Length = 164 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 7/159 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T ++L+ ELD L + RP I A I + RE GDL+EN YHAAREQQG E R Sbjct: 5 QVTWLTEESYDRLKAELDQLIA-NRPVIAAEINDRREEGDLRENGGYHAAREQQGQEEAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE---ADFKQN 118 I+ ++ L+NA+V + K +G + G+ V V D +++ ++G E +D K Sbjct: 64 IRQLQELLNNAKVGEAPKQ--SGIALPGSVVKVYYDDDEKDTETFLIGTREQGVSDGKLE 121 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 + S NSP+ LI + + P G V+ ++ E Sbjct: 122 VYSPNSPLGGALIDAKVGESRSYTVPSGNTVKVTLVSAE 160 >UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clostridiales RepID=A9KJU6_CLOPH Length = 167 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 2/149 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +K++EE+++ K R E I A+ EAR HGDL EN EY+AA++ + EGRI+ + Sbjct: 5 LTKNDIDKMQEEIEYRKLTVRKEAIDAVKEARAHGDLSENFEYYAAKKDKNKNEGRIRYL 64 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E + A+VI+ + + TV++ + +E + Y+++ + Q LIS+ SP Sbjct: 65 ERMIKTAEVIE--DHSSEDEIGINNTVSIYFEEDNEIEKYKLITTVRENSLQGLISIESP 122 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 + + ++G + +D V +K + +IK Sbjct: 123 LGKAILGHKVEDRVYVKVRDDYGYYVIIK 151 >UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia mucilaginosa RepID=D2NP88_9MICC Length = 189 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 11/149 (7%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T ++L +EL++L R EI+ IA+AR+ GDL+EN YHAAR++Q E RIK Sbjct: 32 WLTQDAFDRLTQELEYLSGPYRQEIVDRIAQARDEGDLRENGGYHAARDEQAKNEARIKQ 91 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE------ADFKQN 118 ++ L A + D P + V+ V + + + ++G E A Sbjct: 92 LKHLLETAHIGDT---PADDGVVEHGMV-IEAEVAGRTLKF-LLGSREIEDTLPAGSDLK 146 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGE 147 + S SP+ ++G ++ D V P G+ Sbjct: 147 VFSEKSPLGAAIMGAKQGDEVTYTAPNGK 175 >UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomycetales RepID=B2GLP4_KOCRD Length = 165 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 12/162 (7%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T ++L++ELD++ R EI+ I +AR GDLKEN YHAARE+QG EGR Sbjct: 5 EGAWLTQEAYDRLKKELDYIAGPYRQEIVDRIEQARSEGDLKENGGYHAAREEQGKNEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEA--DFKQN- 118 I + L NAQV + P + VI V + + +E T+ ++G E D Sbjct: 65 IVQLTQLLENAQVGEA---PADDGVIEAGMVVTAEI-AGDEMTF-LMGSREVAEDLTGGE 119 Query: 119 ---LISVNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 + S SP+ + G + + V + P G+ + +++K + Sbjct: 120 DLEVFSERSPMGAAINGHKVGETVSYQAPNGKDITVKILKAK 161 >UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L6P4_EXISA Length = 152 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 4/151 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +L + L L+ R + + AR+ D +E+ Y A Q E I ++ Sbjct: 5 LTETGHHQLTDRLVMLRR-ERTDARERLRTARKFCDFREDVTYTEAVRQYERIEADILEL 63 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 L +A +++ + + V FG V + + +E + YRIV + EAD ++ ISV SP Sbjct: 64 NHLLDDATIVESVQ---SEVVTFGNRVVIREVQQEETERYRIVSEAEADLERGSISVTSP 120 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + R L+G + ++TPGG ++ EV+ +E Sbjct: 121 LGRRLMGATMGQTIQVETPGGTIQVEVLHIE 151 >UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPW8_9ACTO Length = 166 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 7/157 (4%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 A ++ ++L+ ELD L + RP I A I RE GDL+EN YHAARE+QG EGRI Sbjct: 10 ATWLSQDAHDRLQAELDELIA-NRPAIAAEINARREEGDLRENGGYHAAREEQGKQEGRI 68 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--LI 120 ++ L AQV + P+ V G VT+ D ++ ++G E + Sbjct: 69 LYLKELLRTAQVGEA---PSADTVSPGMVVTIYFDDDTDDTETFLLGSREISSTTELTVY 125 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 S S + + ++G V P G +++ V++ E Sbjct: 126 SPESALGKSILGTRPGQTVTYTAPSGADIKVTVVRFE 162 >UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQE9_OPITP Length = 166 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 15/152 (9%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T GAE+L EEL+ L++V RP + A A+ A+ + + R ++ Sbjct: 30 YLTEAGAERLHEELNRLRTVERPALAGAAAD-------------LDAKRELRKLDERARE 76 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++ L+ A++I + P+ V FGA VTV D TYRIVG DE +F IS S Sbjct: 77 LQQILATAEII-SSPAPDRSIVRFGAKVTVKEED-GTTSTYRIVGIDETEFYTGGISFQS 134 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 P+A+ L+G D + ++P G + E+ +E Sbjct: 135 PLAQALLGASVGDRIQFQSPAGPRQLEIQLIE 166 >UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT Length = 597 Score = 122 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 15/153 (9%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 MT GAE+ R L L RR E++A+ + DL E R + E + Sbjct: 459 YMTAAGAERYRRRLQQLVQ-RRDELLASPDD-----DLPE-------RSELATLERELAQ 505 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + A L A VI + P + V FGA V V + D +++VG++EA ++ L++ S Sbjct: 506 VSAVLQGAIVIRLASPPRD-EVRFGAEVVVED-DRGSRSRFQLVGENEAAPERGLVNWFS 563 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+ R L G V TP G + V ++ Y Sbjct: 564 PLGRALAGARLGQRVEWTTPAGRGAYVVREISY 596 >UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MF39_PARUW Length = 723 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 7/158 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I T G K+++ + + +V E I AR GDL+EN+E+ A+E++ + Sbjct: 570 EEIWTTEEGYLKIQDRIRQIGTVEVVENAREIEAARALGDLRENSEFKFAQERRARLQSE 629 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 +K + + A++I + + V G+ + +++ ++ Y I+G +AD ++N++S Sbjct: 630 LKTLSEQFGRARIITPDDILTD-EVGIGSVIDLID-SQGQKIRYSILGPWDADPEKNILS 687 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV-EYL 158 +NS A+ +IGK+ D K + F+V+ + YL Sbjct: 688 LNSKFAQAMIGKKIGDQFQFK----DETFKVLSLHSYL 721 >UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5K0_9BACT Length = 169 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 16/151 (10%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT+ GAE+L++EL L A + L+E E +R++ R++ + Sbjct: 32 MTVDGAERLQKELAVL--------------ADQKAQLEETGEGEISRDELRRVTSRMQAL 77 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L++A+VI +++ + V FG VT+ + E YRIVG DE D + IS SP Sbjct: 78 SQRLADAEVIAISESRGD-EVRFGMFVTIRD-AGGVEDEYRIVGVDEVDLEAGWISWLSP 135 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +A+ ++G++ DVV + P GE + ++ V Sbjct: 136 LAQAIVGRKIGDVVQFQAPAGEKKLHIVAVR 166 >UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6 Tax=Thermaceae RepID=Q5SJG6_THET8 Length = 156 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G E+L ++L+ + R E + E E D +++ AA++++ E R Sbjct: 3 REVKLTKAGYERLMQQLER-ERERLQEATKILQELMESSDDYDDSGLEAAKQEKARIEAR 61 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ--NL 119 I +E LS A +++ + + G+ V + + S E + ++V EA+ Sbjct: 62 IDSLEDILSRAVILEEG---SGEVIGLGSVVELEDPLSGERLSVQVVSPAEANVLDTPMK 118 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 IS SP+ + L+G DV+ + TP G EF V+ + Sbjct: 119 ISDASPMGKALLGHRVGDVLSLDTPKGRREFRVVAI 154 >UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae RepID=A6STV7_JANMA Length = 175 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 52/153 (33%), Positives = 75/153 (49%), Gaps = 9/153 (5%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G L++EL L V RP A D + A A E RI Sbjct: 28 YITPDGYRHLQQELQQLLDVARP--------AAMQMDAADTAMASAQEASLREIEQRIHY 79 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++ ++ +A+V+D + + R+ FGA+V N + E T IVG DE D Q IS S Sbjct: 80 LQTRVESAEVVDASVHADGDRIFFGASVDYENT-AGETHTATIVGLDELDPAQGRISWLS 138 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+A+ L+G EE D V+++TP G E V+ V Y Sbjct: 139 PLAQSLLGAEEGDTVLLQTPAGPEELHVLTVRY 171 >UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bifidobacterium RepID=A1A150_BIFAA Length = 159 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 9/160 (5%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T +K++EEL + + R EI++ ++ AR GDL EN Y AARE Q +GR Sbjct: 5 KTILLTQEAYDKMKEELAWREGEYRDEILSKVSAARAEGDLSENGGYQAAREAQRVNQGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--L 119 I ++ KL NA+++ P G V G+ VT+ + E Y ++G + + + Sbjct: 65 IDELTVKLRNAKIL---TAPKAGEVGDGSLVTLEV--NGREMVY-VLGTRDLSIATDYSI 118 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEYL 158 IS SPI + G D V P G E+ + + + L Sbjct: 119 ISPESPIGAAINGAHAGDTVTYTAPNGREISVTIKEAKPL 158 >UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma RepID=GREA_UREP2 Length = 156 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 1/155 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M ++ E+L+ EL + V+ P I + +ARE GDL ENA+Y AA+ +Q + Sbjct: 1 MAKYTISKHRLEELQLELREILDVKWPAITKQLQDAREQGDLSENADYDAAKNEQAALKK 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R +IE L N ++I+ + + V G+T+ + N D E+ +VG ++D N I Sbjct: 61 RKDEIEEILENYELIE-DVLRSTDEVSIGSTIEIYNYQKDCEEVITLVGSMDSDPFANKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 S+++P+ + L+ +++ V + T + ++IK+ Sbjct: 120 SIDTPLGKALVKQKKGTEVTVHTLASPYKVKIIKI 154 >UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobacillus fermentum RepID=D2KXD7_LACFE Length = 303 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 10/139 (7%) Query: 1 MQAIP---MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGF 57 M I MT G + E+++ LK +RP +IA + AR GDL EN EY A+ + Sbjct: 12 MAKIYYQEMTPAGYRAIEEQIEALKQ-KRPTLIARLKAARVLGDLSENTEYSTAKRELRH 70 Query: 58 CEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVG---DDEAD 114 E ++ ++ +L+ A+VIDV+ ++G+V G VT+ LD EE TY+IVG ++A Sbjct: 71 LESCLRYLDKQLTYAKVIDVS---DDGKVALGKVVTIRFLDDQEEATYQIVGRYQAEQAS 127 Query: 115 FKQNLISVNSPIARGLIGK 133 + +++ +SP+ L GK Sbjct: 128 LTEEVLAFDSPLGLALKGK 146 >UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5G0_9BACT Length = 698 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 84/157 (53%), Gaps = 5/157 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +++ ++L ELD + +V+ PE A+ AR HGD +EN+E+ AA+E++ F R Sbjct: 537 EPNYTSVKSHKRLMAELDDIINVQVPENREALKVARAHGDFRENSEFDAAKERRNFLSRR 596 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++E +L+ Q I + + + G+ + + + ++ E++ Y+++G + D ++ +S Sbjct: 597 RGELERELTRIQPISLKSVRVEDSAVIGSEIELQD-ENGEKEVYQLLGAWDGDPERRFLS 655 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 + + + ++ ++ G ++++I V L Sbjct: 656 YRTRLGKAVLNRKVGSEFS----DGSRQYKLIAVRPL 688 >UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Chlamydiaceae RepID=GREA_CHLPN Length = 722 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 81/155 (52%), Gaps = 6/155 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + T +++ +L L + I +AR GDL+EN+EY A E++ + Sbjct: 566 NVLWSTSESFSRMKAKLQSLVGKEMVDNAKEIEDARSLGDLRENSEYKFALEKRARLQEE 625 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+ + +++ A+++ + +V G VT+ D+ E Y I+G +AD ++S Sbjct: 626 IRVLSEEINRARIL-TKDLVFTDKVGVGCKVTLK-GDAGEVVEYTILGPWDADPDSCILS 683 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + S +A+ ++GK+ +DVV+++ E+++ +++ Sbjct: 684 LQSKLAQNMLGKKLNDVVILQG----KEYKISRIQ 714 >UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA Length = 731 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 6/155 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I T G + +E + + + E I AR GDL+EN+EY A E++ +G Sbjct: 578 NTIWTTEEGYLQTQERIRQIGTTEVVENAREIEAARSLGDLRENSEYKFALEKRSRLQGE 637 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 +K + +L+ A++I + N +V G+ V + + + + TY I+G +AD N++S Sbjct: 638 LKRLSEQLNRARIITKDDIYLN-QVSVGSIVELEDPEKN-VVTYTILGPWDADADTNILS 695 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 S A ++G++ + + F + ++ Sbjct: 696 FQSKFAEAMLGRKVGEEFEFR----NQNFTIRTIK 726 >UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococcus radiodurans RepID=Q9RRW0_DEIRA Length = 183 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 8/160 (5%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +P+T G +L+ L+ + RR E + E E + E+ + AA+E G E R Sbjct: 26 QPLPLTPEGLSRLQAALER-EQARREEARRVVQEQMEANE-NESLDLAAAQETLGAVEAR 83 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--- 118 I+++E +L+ A V+ N+GR G+ VT+LN+ E +V EA Sbjct: 84 IEELEDQLARAVVLAPGA-GNDGRAAVGSRVTLLNIGLGRELPLHLVSAAEAAAGPGTSG 142 Query: 119 --LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 L+S SP+ R L+G+ + + + ++ V+ VE Sbjct: 143 VALVSTESPVGRALLGRRAGEEFTVDLGRTQAQYRVLMVE 182 >UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae RepID=C6WVB7_METML Length = 168 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T GA EL L+ E+ LK A+ A+++ E + Sbjct: 28 PNYVTPSGAL----ELQTLEESLVAELNR----------LKLTADDTFAKDKVAEIERDL 73 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + A+L +A ++D TK + V+FGAT+ V + + + T+ IVG+DEAD N +S Sbjct: 74 RYVRARLDSAILVDPTKQSHE-TVLFGATIEVED-GAGAQHTFHIVGEDEADASINKVSW 131 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ L+G++ D V + P G + E++ + Y Sbjct: 132 VSPLAKSLLGQKVGDTVTWQRPAGNINLEILDIHY 166 >UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQI1_9GAMM Length = 166 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 3/128 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 ++ +T G ++L E L RR E++ A++ A GD ENAEY +++ + R Sbjct: 35 KSPYITSDGHQRLLAEEQGLWKRRR-EVVKALSAAAAEGDRSENAEYIYRKKELREIDRR 93 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+ ++ ++ +V++ + P+N + +F A L + YRIVG DE D + + IS Sbjct: 94 IRYLQKRIPELKVVE--QPPSNRQQVFFAAWVTLEDEQGVTHRYRIVGPDEIDHQADYIS 151 Query: 122 VNSPIARG 129 ++SP+ G Sbjct: 152 MDSPLGAG 159 >UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas RepID=Q4K5S3_PSEF5 Length = 197 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 18/155 (11%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T +G +L+ + L ++ E DL ++A+ +++ E Sbjct: 59 QPNYVTPQGLAELQARVALLH-----------SQHSEQNDLGDDAD----KQRMAELERD 103 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ +L +AQV+ T + +V G+ VT + + D +Q+ ++VG+D+AD + LI+ Sbjct: 104 LRYFTQRLHSAQVV--TTANSTDKVQIGSRVTFAD-EQDRQQSVQLVGEDQADAAKGLIN 160 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ R L+G + D V+ + P G E+I++E Sbjct: 161 WASPLGRALLGAQPGDEVLWQRPAGNQLIEIIRIE 195 >UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter RepID=B4UMG4_ANASK Length = 169 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 17/155 (10%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G LRE L L++ R +A D + A + G + R Sbjct: 27 EVRYVTPEGQAALREALARLRADR--------GDAARLPDAERPA-------RLGELDAR 71 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++A L V+ P G+V FG VTV D T+R+VG DEAD ++ LIS Sbjct: 72 IAALDATLGALTVLGPEATP-EGQVGFGTWVTVEEED-GRRVTWRLVGPDEADARRGLIS 129 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+AR L+G+ DVV + PGGE E V+ V Sbjct: 130 AGSPVARALLGRRAGDVVEVNRPGGEAELTVVAVR 164 >UniRef50_C6UNA6 Putative transcription elongation factor GreA n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UNA6_HODCD Length = 155 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 3/141 (2%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M A +T G L +L++ + ++P + A + AR GDL ENA+Y AAR + E Sbjct: 1 MAATTLTALGYISLVAQLNWRRQHKKPALKAQLKAARSLGDLSENADYQAARREDKLNEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI +I L+ A++ R + +TV + D + + IVGDDEA + + Sbjct: 61 RINEILQTLARAKL--APARSAANRPSYNSTVVLKRAD-GKLLAFNIVGDDEAIATEANV 117 Query: 121 SVNSPIARGLIGKEEDDVVVI 141 ++S +AR + K+ DVVV+ Sbjct: 118 GLSSDVARQCLNKKVGDVVVV 138 >UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X3W9_FLAB3 Length = 183 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 16/153 (10%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G E L++E L S + E D EY R R++ Sbjct: 47 WVTPAGMEALQQERADLISEQ------------EKLDPSHEREY---RIAFNHLNARLQL 91 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + ++++A++ID ++ + G V FGATVT NL+++ QT+++VG DEA+ + ++ + Sbjct: 92 LNGRMASAKIIDTARL-SQGEVHFGATVTFKNLNNNLRQTFQLVGVDEANISKGKLAFTT 150 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+A+ LI + + V ++ FE++ + Y Sbjct: 151 PLAKALINSKVGEKVTLQLGDKTNIFEILSIGY 183 >UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostridium acetobutylicum RepID=Q97HP4_CLOAB Length = 158 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 6/143 (4%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +KL+EE ++ +V+R EI EA GD ENAEY AA+E+ R+ I Sbjct: 5 LTKSDYDKLKEEYEYRNTVKRHEIAKKKMEAAAFGDRSENAEYKAAKEEYYHNNRRLGQI 64 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEA---DFKQNLISV 122 L NA +++ K+ + V G+ + + + +DE ++V D ISV Sbjct: 65 SRLLKNAIIVEEDKI--DDEVNIGSEMLLK-IGADETFKAKLVTTLNISVEDEDIEYISV 121 Query: 123 NSPIARGLIGKEEDDVVVIKTPG 145 +SP + L K D + + P Sbjct: 122 DSPFGKALYKKHVGDSIDVNLPD 144 >UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deinococci RepID=Q1IZY0_DEIGD Length = 162 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 7/160 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G E+L+ L + R E + E E E+ A+ ++ E R Sbjct: 6 RQVRLTREGFERLQRTLAQ-EQARLAEATRILQEQMETSADNEDTGLEDAKREKLNIEAR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--- 118 I+++E L+ A +I+ N GRV GA VT+ N + + ++V EA Sbjct: 65 IEELEDTLARATLIE--DHENAGRVELGAVVTLNNETTKQTMRVQVVSAPEATVLGGSLP 122 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 IS SP+ R L+G+++D+ V+ G+ V++ V +EY Sbjct: 123 RISEESPVGRQLMGRKKDETFVVNLENGKQVKYRVQDIEY 162 >UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QK34_9SPHI Length = 171 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 15/154 (9%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T RG LR+E + L+ A L + E Q G+I Sbjct: 30 YVTPRGLAMLRDEFEKLEKE----------HALAQTQLTDENE---RTRQLALLNGQIAA 76 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDE-EQTYRIVGDDEADFKQNLISVN 123 + +++ A+V+++ P + V FGATVT+ + + + +Q IVG DEAD I+ Sbjct: 77 LNQRIATAKVVNMQDHPLD-EVRFGATVTLSSQSTGKADQQLTIVGVDEADAIHGRIAFP 135 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +PIAR L+GK+ D + ++TP GE E+ + Y Sbjct: 136 APIARLLLGKKVGDFITLRTPRGENALEITSIYY 169 >UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2 RepID=C8S319_9RHOB Length = 167 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 27/160 (16%) Query: 3 AIPMTLRGAEKLREELDFLKSVRR-----PEIIAAIAEAREHGDLKENAEYHAAREQQGF 57 +T RG L+ L ++ PE + + EA D Sbjct: 25 PNYVTPRGLALLQTRLAEAQARLAALRARPERLDKLPEAAAERD---------------- 68 Query: 58 CEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 I+ +EA+L +A +D + P G V FGA V V L Q ++I G+DEAD Q Sbjct: 69 ----IRYLEARLRSAIPVDPSSQP-AGEVAFGARVEVA-LADGSRQVWQITGEDEADATQ 122 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 N I+ SP+AR L+G E D+V+ + P G VE EV+ + Y Sbjct: 123 NRIAPQSPLARALLGAEVGDLVIWRKPSGPVELEVLAIAY 162 >UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2 Tax=Cystobacterineae RepID=Q1CX76_MYXXD Length = 167 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 21/158 (13%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAR--EQQGFCE 59 + +T G L+EEL A G + E+ ++ E Sbjct: 26 EKRYITPEGYRALQEEL-----------------AAAQGPDPKAGEFTELEAGVRRKERE 68 Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 R++++ A L + +V++ GRV FGA V + + D YRIVG DE+D K Sbjct: 69 RRVQELAAVLEDVRVVEP-DASQAGRVFFGAWVELEDEDGG-PVRYRIVGPDESDVKAGR 126 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +SV SP+AR L+GKE + VV+ P G VE+ V V+Y Sbjct: 127 LSVESPLARALLGKEVGESVVVDRPRGPVEYTVTAVDY 164 >UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms RepID=C6B1R3_RHILS Length = 160 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 70/152 (46%), Gaps = 23/152 (15%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR-IKD 64 +T G + L EL F +ARE D E R +Q R ++ Sbjct: 31 VTEAGLKAL--ELQF-------------QQAREAYDAASPIEDVNERRRQAASPLRDLRY 75 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + A+L AQ++ + V FG+TVT D QTYRIVG+DEAD K IS S Sbjct: 76 LTARLRTAQLM--PSPTSIDTVAFGSTVTFRR-DDGRVQTYRIVGEDEADPKAGSISYVS 132 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 P+AR L+GK D+V G E E+I + Sbjct: 133 PVARLLMGKAVGDMVE----TGGQELEIIAIA 160 >UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes RepID=A3HZU2_9SPHI Length = 166 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 16/153 (10%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G E+L+ E L + A E R F +IK Sbjct: 30 YVTETGMEELQAEKQALIEEKSNLTAATEQEKRIAS---------------NFISAKIKL 74 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++ +++ A+++D+++ P N + FGA VT+ S + TY++VG DEAD +N IS S Sbjct: 75 LDERIATAKIVDLSEQPKN-EIRFGAKVTLKIGKSPKAMTYQLVGVDEADISKNKISFIS 133 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 PIA LIGK+ + + G+ FEV++++Y Sbjct: 134 PIAMILIGKKVGEKATLSLTKGDRVFEVMEIKY 166 >UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=uncultured bacterium URE4 RepID=C0JZV3_9BACT Length = 112 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 67/103 (65%), Gaps = 1/103 (0%) Query: 54 QQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEA 113 +QG E +I ++ K++NA+VID +K+ + V + VTV N+++ + ++IVG+ EA Sbjct: 10 RQGLLEVKIARLKEKVANARVIDESKLSAD-TVQLLSKVTVENMNAKMKMQFQIVGESEA 68 Query: 114 DFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 DF + L+S ++PI + L+G + +VV K P G ++F+++ + Sbjct: 69 DFSKGLLSASTPIGKALMGHGKGEVVEAKVPSGIMKFKILDIS 111 >UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABM5_GEMAT Length = 161 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 1/151 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 M ++ E++ L+ + I +A E GDLKEN+EY AA E+Q F + R+ + Sbjct: 1 MFQELIAQMAREVEKLQFELNVTLPNEIRKAVELGDLKENSEYKAALERQQFVQARLGQL 60 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +++ ID+T++P + RV G+ V V +L S +TY +V D + +++ SP Sbjct: 61 TQRVTKLANIDITQIPGD-RVGLGSKVIVEDLQSKARETYELVFGDAGELHDGHVTMGSP 119 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 I R L GK + ++K P + ++++++ Sbjct: 120 IGRALQGKSVGEEAILKLPTRIRKLQIVELQ 150 >UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales RepID=B5EI69_GEOBB Length = 143 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 1/110 (0%) Query: 48 YHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRI 107 AR Q +K++ +L A+V+D +P + + + V + +LDS+EE Y + Sbjct: 25 IDKARSTQTRDSKNLKELGEELVRAEVVDPAGIPPD-VITMNSKVCLQDLDSEEELVYTL 83 Query: 108 VGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V +EAD IS+ +P+ +IG D + PGG +V K+ Y Sbjct: 84 VFPNEADLASGKISILAPVGTAMIGFRTGDRITWPVPGGMKNLKVKKILY 133 >UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococcineae RepID=Q83FN6_TROWT Length = 172 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 8/158 (5%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 ++ L EL+ L + R EI I +AR GDL+EN Y AA+E+Q EGR Sbjct: 15 SETWLSKEAHSVLVVELEELVTTGRKEIAKRIEQARSEGDLRENGGYSAAKEEQARIEGR 74 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL-- 119 I+ ++ L +A+V + P V+ V + E + ++G+ E +L Sbjct: 75 IQQLQDLLRHARV---GQAPKARGVVEPGVVVTARIGGSERR--FLLGNREIAHTSSLAT 129 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 S +S I + ++G +E + K+P G ++ ++KVE Sbjct: 130 YSESSAIGQAILGLKEGSEIECKSPTGALIKVAILKVE 167 >UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IXC6_DEIGD Length = 158 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 5/157 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + IPMT G +L+E L+ + + A + DL E+ + AA+ E R Sbjct: 3 EEIPMTAEGYRRLQETLEKERQRLEDATTSMAATLDDAMDL-EDRSFQAAQYDLPTMEAR 61 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--- 118 I ++E L+ A +++ + +G V G+ V + + D E ++V E D Sbjct: 62 ILELEDVLARAVIVEEPQ-ARDGGVALGSVVVLRDEQHDRELRVQLVSAVEVDALAEGAT 120 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +S +SP+ + L+G+ + + + V + Sbjct: 121 QVSEDSPVGKALLGRRAGESFEVDLGSSRARYTVKSI 157 >UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas RepID=Q88Q22_PSEPK Length = 165 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 24/157 (15%) Query: 2 QAIPMTLRGAEKLR---EELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFC 58 Q +T G +L+ EL+ L+S + E GD +++ Sbjct: 26 QPNYVTASGLRQLQTRVAELNALRS--------ELQAQGERGD----------KQRLADT 67 Query: 59 EGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN 118 E ++ A++ +AQV+ ++ +V G+ V ++ D+EQ ++VG+DEAD Sbjct: 68 ERDLRYFSARVQSAQVVPAAT--SHSKVQIGSRVRFVDAQ-DQEQVVQLVGEDEADAGHG 124 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 LI+ SP+ R L+G D VV + P GE EV+++ Sbjct: 125 LINWGSPLGRALLGAGPGDEVVWRRPVGEQVIEVVEI 161 >UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae RepID=A0M1N1_GRAFK Length = 166 Score = 99.8 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 16/153 (10%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G +L++EL L+ R H + + + E R Q +G+I Sbjct: 30 YVTPNGLAELKQELKDLEYE------------RAHVEAENDTE---KRRAQSLIDGKINL 74 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L A+++D P + + FGA V + N S + Q ++IVG DEAD K+ I+ + Sbjct: 75 LSERLQTARLLDSKDQPKD-EIRFGARVKLTNETSGQLQEFQIVGVDEADIKKKKIAFVA 133 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 PIA+ + G++ + + K + +V+ + Y Sbjct: 134 PIAKAVTGRKVGEEIDFKLGNEIRKLKVLGITY 166 >UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11P04_CYTH3 Length = 149 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L ++++ ++PNN V + VT++ +DS++ +++V D+AD K N IS+ S Sbjct: 48 LMNELKLGKLVEPEEIPNN-VVTMHSIVTIVFMDSNKRVEFQLVYPDKADVKNNKISIFS 106 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 PIA LIG + D + P G + ++ + Y Sbjct: 107 PIATALIGYQIGDEIEWCVPAGMTKIKIESIAY 139 >UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria RepID=A0LL17_SYNFM Length = 141 Score = 99.1 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 ++ +E +L A+V+ +P + V + V V +LD+ E Y +V EAD KQN I Sbjct: 36 HLQVLEEELRKAEVVAARNIPRD-TVTMNSKVRVKDLDTGIETIYHLVFPGEADVKQNRI 94 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV +PI LIG DV+ P G + + ++ Y Sbjct: 95 SVLAPIGTALIGYAVGDVIQWNVPAGTKKLRIEEILY 131 >UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium hafniense RepID=B8G0E1_DESHD Length = 138 Score = 97.9 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 73/137 (53%), Gaps = 15/137 (10%) Query: 21 LKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKM 80 + +V R ++ I + RE G K N +Y +KD+E +L+ A V+ K+ Sbjct: 7 ITAVDRERLLKLINKEREFGSAK-NKDY-------------LKDLEHELNGADVVPSEKI 52 Query: 81 PNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVV 140 P N + + + + +L++ EE Y +V ++AD ++ IS+ +P+ ++G E D++ Sbjct: 53 PGN-AITMNSRILLKDLETGEETVYTLVYPEDADLLEDKISILAPVGTAILGYLEGDIID 111 Query: 141 IKTPGGEVEFEVIKVEY 157 K PGG V F+V K+ Y Sbjct: 112 WKVPGGVVRFKVEKILY 128 >UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides RepID=B9KMW2_RHOSK Length = 164 Score = 97.5 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 17/152 (11%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T RG L+ L A + R E R + E I+ + Sbjct: 28 VTPRGLADLQARLL--------ATQARLRALRA-------REDRLDRLPEAAAERDIRYL 72 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 EA++++A ++D P + V FG VTV + ++ + I G+DEA I+ +P Sbjct: 73 EARIASAILVDPAAQPLD-EVAFGLAVTVED-EAGRRTVWEITGEDEAQATARRIAPQAP 130 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR L+G + VV P GEV V + + Sbjct: 131 LARALMGARLGEKVVWTRPAGEVTLTVTGIAH 162 >UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK Length = 160 Score = 97.5 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 23/152 (15%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR-IKD 64 MT G + L +L +AR E R +Q R ++ Sbjct: 31 MTEAGLKALELQL---------------QQARAAYAAASTIEDVNERRRQAAGPLRDLRY 75 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + ++ AQ I + V FG+TVT D QTYRIVG+DEAD K IS S Sbjct: 76 LAERIRTAQPI--PAPASIDIVAFGSTVTFSR-DDGRVQTYRIVGEDEADPKTGSISFVS 132 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 P+A+ L+GK DV + G+ E E+I + Sbjct: 133 PVAKLLMGKSVGDVASV----GDQELEIIAIA 160 >UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria RepID=B6BTF1_9PROT Length = 164 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 17/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G ++L+E + +++ I +E D EN ++ + E + Sbjct: 27 PNYVTPNGHKQLKETIHLIET--------EIKSIKELEDSPEN------KQNKMKLERDL 72 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + A +ID K N +V+FGA V +++ ++DE ++IVG+DEAD KQN +S Sbjct: 73 RYYLKRFETAILID--KHEENNKVLFGAHVILID-ENDEAYKFQIVGEDEADIKQNKLSY 129 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ LIG D VV K G + + Y Sbjct: 130 VSPLAKELIGSLIGDEVVWKRADGNRVVFIDSINY 164 >UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6F4_9BACT Length = 148 Score = 96.0 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 6/115 (5%) Query: 46 AEYHAAREQQGFC-EGR-----IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDS 99 A+ R + EGR + + A+ A +I+ +G V V + +LD+ Sbjct: 12 ADLLQIRARLNLIAEGRHDRENLARLRAEFDRALIIEDDTAMPDGVVTLHCEVRLQDLDT 71 Query: 100 DEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 +E +TY + + AD + + IS+ +PI L+G + D+VV + PGG +++ Sbjct: 72 NEIETYTLTLPEHADPEAHRISILAPIGTALLGYQVDNVVTWEMPGGARRLRILE 126 >UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G7_DESAP Length = 154 Score = 95.6 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 1/110 (0%) Query: 48 YHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRI 107 E + F + + + L+ A+V++ + P + G + V +LD + +R+ Sbjct: 43 IDDRTEVRLFLDDYLNRVRELLARARVVE-GQCPPLPLTLIGCDIRVEDLDRGHSEMFRV 101 Query: 108 VGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V E + +S SP+ RGL+ KE V+ ++ PGG + V+ V Y Sbjct: 102 VSPYEINPAAGHVSFLSPVGRGLLLKEPGQVLAVQAPGGTFRYRVVSVTY 151 >UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax=Deinococcus deserti VCD115 RepID=C1CW74_DEIDV Length = 162 Score = 95.6 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 7/158 (4%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAR--EQQGFCEG 60 A+ +T G E+L + L+ + I + + DL EN +AA+ +++ E Sbjct: 4 AVQLTREGYERLEQSLEKERQRLEETITSLANTVDDAMDL-ENRSLNAAQIGQERIAIEA 62 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN-- 118 RI ++E L+ A +++ +P G+V G+ V + + + ++V E Sbjct: 63 RILELEDVLARAVIVEEEDLPR-GQVAVGSVVMLEDDKHGRQLQVQLVSAVEISAMTEGV 121 Query: 119 -LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +S +SP+ + L+G+ E + ++ G V++ V V Sbjct: 122 TQVSDDSPVGKALMGRREGETFDVELEAGRVQYTVRSV 159 >UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Z9_METFK Length = 138 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 1/96 (1%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + +E +L+ ++ + ++ V + V + + + E + +V +AD N IS Sbjct: 34 LARLEDELARSEEV-PSEQVGADVVTMNSRVLLRDEANGHEMSCTLVFPSDADASANRIS 92 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V +P+ ++G DV+ PGG ++ ++K++Y Sbjct: 93 VVAPLGTAILGYRVGDVIDWAMPGGVRQYRILKIDY 128 >UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales RepID=C6VSR5_DYAFD Length = 134 Score = 92.5 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L+ A V++ ++P G + + V V +++E + IV +AD + IS+ + Sbjct: 36 LAYELNRAVVVEDNELP-AGSIRLNSYVKVRETTTNKEMAFSIVMPKDADIAKQRISILT 94 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+ LIG + + V K P G F+++ V Y Sbjct: 95 PMGAALIGLCKGETVEWKMPAGIRRFKILDVWY 127 >UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEQ9_LEPBA Length = 138 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 64/119 (53%), Gaps = 7/119 (5%) Query: 45 NAEYHAARE------QQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLD 98 N +Y ++ ++ + ++D+ ++ AQ +D ++P+N V + + + NL+ Sbjct: 11 NLDYIRLKKMILEYSKRNKTDANVQDLLGEIERAQKVDSKQIPSN-VVTMNSVIEIKNLE 69 Query: 99 SDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 E + +R+V ++++ QN IS+ +PIA IG + DV+ P G F++ +++Y Sbjct: 70 GIEFKEFRLVYPEDSNLDQNQISILAPIATASIGYKTGDVIFWNVPDGVYRFQITEIKY 128 >UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=C5S652_CHRVI Length = 171 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++EA+L+ A+V+D +MP N V +TV + ++E T +V + D IS+ Sbjct: 68 ELEAELARAEVVDPREMPPN-VVSMNSTVRFRVMSTNEAFTLTLVYPKDMDASGGKISIL 126 Query: 124 SPIARGLIGKEEDDVVVIKTP-GGEVEFEVIKVEY 157 +P+ L+G D + P GG + + +V Y Sbjct: 127 APVGSALLGLSSGDEIEWPKPGGGVLRVRIEEVTY 161 >UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum RepID=A6X2G5_OCHA4 Length = 156 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 24/153 (15%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G + +E+ L+ +A+A G+ ++ Sbjct: 28 VTPTGLTMIEDEIARLQ--------RELADANVAGERS----------AIARISRDLRYW 69 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + NA++ +P++ V FG TV + NLD + + + IVG+DEAD IS +P Sbjct: 70 TTRRENAEL--SVPVPDSDVVRFGMTVELENLDDGKVRRWTIVGEDEADPSNGKISHVAP 127 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 +A L GK DVV I VE+E++ ++ + Sbjct: 128 VAILLFGKPVGDVVKIN----NVEWEIVSLKIV 156 >UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZU20_OPITP Length = 143 Score = 88.7 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 + ++LS V+D T +P + G+TV + +L+S E +TY +V ++A+ +SV Sbjct: 31 QLRSELSRGVVVDATALPPT-AIRLGSTVEIEDLESGEIETYTLVLPEQANVDARKLSVL 89 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +PI +IG + V TPGG + +V Sbjct: 90 APIGTAVIGCLQGAEVAWSTPGGTRRLRIGRVS 122 >UniRef50_A2VH02 Transcription elongation factor greA (Transcript cleavage factor greA ) (Fragment) n=1 Tax=Mycobacterium tuberculosis C RepID=A2VH02_MYCTU Length = 110 Score = 88.7 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 3/95 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T ++L+ ELD L + RP I A I + RE GDL+EN YHAARE+QG E R Sbjct: 5 QVTWLTQESHDRLKAELDQLIA-NRPVIAAEINDRREEGDLRENGGYHAAREEQGQQEAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLN 96 I+ ++ LSNA+V + K +G + G+ V V Sbjct: 64 IRQLQDLLSNAKVGEAPKQ--SGVALPGSVVKVYY 96 >UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms RepID=B9NGJ6_POPTR Length = 145 Score = 87.5 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 2/94 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++A L A ++ +P + V + V + + + +V D+AD +SV S Sbjct: 43 LDALLERAAIVSPDAIPKD-VVTMNSRVVCALEGEAKPRDWTLVYPDDADLATGRLSVLS 101 Query: 125 PIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 PI + L+G D V + P G ++++ + Sbjct: 102 PIGQALLGARSGDTVDYRLPDGRAQRVTIVEIAF 135 >UniRef50_C5BTE2 Transcription elongation factor GreA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTE2_TERTT Length = 126 Score = 86.4 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 ++ +L++A V+D + GRV FG+ VTV ++D +EEQ+++IV DE+ + L+ Sbjct: 30 AELRTRLASATVVDNDDIMG-GRVQFGSLVTVFSIDEEEEQSFQIVSSDESLSGRGLLDQ 88 Query: 123 NSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKV 155 SP+A+ L G E +VV + G ++EV + Sbjct: 89 RSPLAQALFGAREGEVVRVLLQNGSNCDYEVTHI 122 >UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GAI2_SORC5 Length = 140 Score = 86.0 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 31/156 (19%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T ++L L+ L+ AR GD E Sbjct: 6 NPIVLTEFDRDRLARLLEALR-------------ARPGGDSP-------------NLEA- 38 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 +E ++ A V+ +P N V + V +++LD++E +V AD K IS Sbjct: 39 ---LEIEIERADVVKPADIPPN-VVTMNSRVELVDLDTEERLCVTVVFPGNADVKSGRIS 94 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V +P+ L+G E D V TP + ++ Y Sbjct: 95 VLAPMGLALLGCREADEVEWPTPSRTRRLRIERIAY 130 >UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RDE4_PHEZH Length = 161 Score = 85.6 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%) Query: 37 REHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLN 96 R DL + Q + + A+ +NAQV++ P+ V FG VT Sbjct: 39 RALADLDQRIAGCEDEAQMAWLRRDQRYWAARRANAQVVESPADPD--EVAFGTRVTFRK 96 Query: 97 LDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 D +T +VG+DEA+ Q +S +P+AR +IG + V ++T + E++ VE Sbjct: 97 -DGGAPETVELVGEDEAEPAQGRLSWVAPLARAMIGAMPGETVELETRTPAIRLEILAVE 155 Query: 157 YL 158 + Sbjct: 156 PI 157 >UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI Length = 129 Score = 85.6 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + A+LS A ++ + P++ + +TV + + + E IV A+ K+ ISV + Sbjct: 35 LSAELSRAVILSNEEFPSD-AIRLNSTVRIQDESTGEIMELIIVLPQHANIKEKKISVLT 93 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 PIA LIG + D V K P G F + +V Sbjct: 94 PIAAALIGFRQGDAVQWKVPAGLKNFRITEVA 125 >UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltaproteobacteria RepID=Q2LTP9_SYNAS Length = 134 Score = 85.2 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 2/96 (2%) Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + +EA+L NA V+ +MP + V + V +L + +T +V +A+ +SV Sbjct: 30 RSLEAELVNAVVVPSEEMPPD-VVTMNSCVCFEDLTTGNRETITLVYPGQANMASGRVSV 88 Query: 123 NSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 +P+ LIG + P G + +++V Y Sbjct: 89 LAPVGSALIGLSVGQTIEWPMPNGRKRRLRIVEVLY 124 >UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 Tax=Gammaproteobacteria RepID=Q3BX42_XANC5 Length = 146 Score = 85.2 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L A+V+ ++P + V + + + E T +V EAD + ISV + Sbjct: 41 LSDELGRARVLPPDQIPGD-VVTMHSRIECEDQLHGERHTLTLVYPHEADVQHGRISVLA 99 Query: 125 PIARGLIGKEEDDVVVIKTPGG-EVEFEVIKV 155 P+ L+G + +TP G ++ V V Sbjct: 100 PVGSALLGLSVGQSIDWRTPDGRDLRLRVTAV 131 >UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4X0_PELTS Length = 150 Score = 84.8 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 5/110 (4%) Query: 49 HAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGR--VIFGATVTVLNLDSDEEQTYR 106 E + E I+ ++ + NA +K+ +N V G+ V + NL E Y Sbjct: 38 KERNEFENLIENYIQRLDRLIRNA---SKSKIADNKVPFVTIGSEVEIQNLSEQEVYKYF 94 Query: 107 IVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IV ++ ++ IS SP+ + L+ K+ D V +K PGG +++ + Sbjct: 95 IVNPFYSEVREGHISFLSPVGKSLLLKKVGDEVEVKAPGGVFRYKIKSIR 144 >UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF63_CELJU Length = 180 Score = 84.4 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 13/141 (9%) Query: 18 LDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD-IEAKLSNAQVID 76 L+ LK V E I+ N++Y + + + ++ ++ A ++ Sbjct: 48 LEKLKMVATTETSLVIS----------NSDYQRLVQLIEDNDSPAAEALDIEIGRATLVA 97 Query: 77 VTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEED 136 ++P + V + VT +LDS E++T ++V +A+ Q IS+ SP+ LIG Sbjct: 98 DAQLPAD-VVAMDSEVTFEDLDSGEQKTIQLVFPAQANVDQLKISILSPVGSALIGLRIG 156 Query: 137 DVVVIKTPGGE-VEFEVIKVE 156 + P G+ +VI V+ Sbjct: 157 SSIDWPVPQGKVRRLKVIAVK 177 >UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Proteobacteria RepID=B8GS58_THISH Length = 137 Score = 82.9 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 2/96 (2%) Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + A+L A V++ +++P V + V E +V D + ISV Sbjct: 33 RQLLAELERANVVEPSQVPPT-LVTMNSRVRFRVEPEGREFQRTLVYPSGMDGDEEKISV 91 Query: 123 NSPIARGLIGKEEDDVVVIKTP-GGEVEFEVIKVEY 157 +PI L+G D + TP GGE+ ++++ Y Sbjct: 92 LAPIGSALLGLSVGDSIAWPTPKGGEMNVRIMEILY 127 >UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alphaproteobacteria RepID=B0T2S8_CAUSK Length = 161 Score = 82.5 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 21/150 (14%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G ++ +EL AA + A+ GD+ ++ R ++ Sbjct: 30 VTPGGLVRIEDELA--------AARAAYSAAQAGGDVAQD------RTAMARATRDLRYW 75 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 A+ ++AQ+ ++ P + FG +VT + + QT+RIVG+DEAD Q +S SP Sbjct: 76 SARRASAQLRELD--PALDVLQFGGSVTF-DREDGRRQTFRIVGEDEADPTQGSVSYVSP 132 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +AR L+GK D ++ GGE E+I + Sbjct: 133 VARALLGKAVGDTAIVA--GGE--VEIIAI 158 >UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5Q8_FLAB3 Length = 170 Score = 82.1 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 + +L +A++++ +P + V + V + ++ ++IV ++A+ K IS+ Sbjct: 68 RLLRELHSAKIVESADIPAD-VVTMNSVVKIHFENNKTVTEFKIVYPEQANIKDRKISIF 126 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A LIG +D + P G + + ++ Y Sbjct: 127 SPVAAALIGYSVNDEIDWIVPSGMTKIIIDEIIY 160 >UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74EX3_GEOSL Length = 135 Score = 81.7 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 1/96 (1%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ +E +L++A ++D +P N V + V + +L +D+E T +V ++A+ + IS Sbjct: 31 LQKLEDELASAMIVDPKDVPPN-VVTMNSRVKLRDLRADKEMTISLVFPNDANIAEGKIS 89 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 + SPI ++G D + + + + +V Y Sbjct: 90 ILSPIGTAILGFGAGDTLDLAVRSFAKKIRIEEVLY 125 >UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/GreB family n=2 Tax=Aurantimonadaceae RepID=Q1YFK5_MOBAS Length = 158 Score = 81.7 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 25/155 (16%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T RG + E+ L R E + + Sbjct: 25 EPNLVTPRGLSLIDAEIAAL--NERKEAARQADD----------------KIAIANINRD 66 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ A+ + A++I + FG+ V++ D Q + IVG DEAD LIS Sbjct: 67 LRYWNARRATAELIRPRDTGGTAQ--FGSVVSIERED-GRTQQFTIVGIDEADPSAGLIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+AR LIG+ D+V G + E+I + Sbjct: 124 YLSPLARSLIGRTVGDIVR----AGTADAEIIAIS 154 >UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803 RepID=A0LZA7_GRAFK Length = 146 Score = 81.7 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 24/142 (16%) Query: 15 REELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQV 74 ++E DFLK + ++ A+ H D A I + +L +A++ Sbjct: 10 KKEYDFLKQI--------MSLAKYHKDTSYKAS--------------IYKLNEELKDARI 47 Query: 75 IDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKE 134 + ++MP + + + VT+ E+TY+IV ++ D ++N ISV +P+ L G Sbjct: 48 LTNSEMPLD-VIRLNSLVTIE-TPYAVERTYQIVTPEKGDIRKNKISVLAPMGLALFGYA 105 Query: 135 EDDVVVIKTPGGEVEFEVIKVE 156 + D + P GE ++ +V+ Sbjct: 106 QGDNITWTFPLGESYIKIKEVK 127 >UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN Length = 137 Score = 81.7 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 52/93 (55%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + A+L+ A +++ ++P + V +TV + +L++DE +TY +V +A+ K+ +S+ + Sbjct: 37 LHAELAVAHIVESEEIPAD-IVTMNSTVRLRDLETDELETYTLVYPQDANIKEGKLSILT 95 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 PI ++G D + + G + V ++ + Sbjct: 96 PIGTAILGYRIGDQLRSRALAGGSKIRVEEILF 128 >UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria RepID=A6VVR5_MARMS Length = 137 Score = 81.7 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 D++ +++ A++++ MP+N V +TVT L S++E + +V +A+ ++ +SV Sbjct: 34 DLQEEINRAEIVEPRDMPDN-IVTMNSTVTFKVLSSEKEFSKTLVYPKDANGAEDTVSVL 92 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVEY 157 +P+ L+G +E D + P G+V ++KV+Y Sbjct: 93 APVGSALLGLKEGDQIDWPKPNGDVLSVVIMKVDY 127 >UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteobacteria RepID=Q5P744_AZOSE Length = 158 Score = 81.0 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 2/95 (2%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 + A+L A V+ +P + V + V L+ S E++ ++V +EAD +SV Sbjct: 57 QLRAELERAVVVPPDFLPRH-VVTMHSRVRYLDEASGEQREIQVVYPEEADVAAGKVSVF 115 Query: 124 SPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 +P+ L+G D V+ P G V +V + Sbjct: 116 APVGAALLGLSVDQVIEWDFPRGPRRRLRVEEVLH 150 >UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GQE5_9BURK Length = 122 Score = 80.6 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++ A L NA+ I +P + V + T++ +S + +A+ + ISV Sbjct: 19 ELNAALDNAEFIKPQDIPAD-VVTMNSLFTIVETESGSTNKLMLCYPSDAEPAKGYISVL 77 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 SP+ L+G++ V TP GE F V+K Sbjct: 78 SPVGASLLGRKAGTVAQWATPNGEQHFAVVK 108 >UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CMB9_9FLAO Length = 139 Score = 80.6 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 10/123 (8%) Query: 42 LKENAEYHAARE--------QQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVT 93 L E EY + I+ + +L +A+++D +M N V F + +T Sbjct: 7 LIEKKEYVLLKRYVNLSAHYHDATLWQSIQKLLTELDSAKIVDEAEM-QNDVVRFHSIIT 65 Query: 94 VLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVI 153 V + ++ + ++V E D ++ IS+ +P+ L G E D V + P G + Sbjct: 66 VTS-ENGWSRRVQLVLPPERDVSKDKISILTPMGIALFGYAEGDTVSWEFPSGPKRLRIE 124 Query: 154 KVE 156 KVE Sbjct: 125 KVE 127 >UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FHU8_FLAJ1 Length = 132 Score = 80.2 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 58/117 (49%), Gaps = 6/117 (5%) Query: 45 NAEYHAARE-----QQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDS 99 ++Y RE + + +L A + +++ ++ + + VT+ ++ + Sbjct: 9 KSDYQFLRELILKSKNSTNTKEANQLSQELDRAVISKESEL-DSSVIRINSLVTIEDVKA 67 Query: 100 DEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +++ +IV AD KQ+ IS+ +P++ +IG +E+D V + P G +++ V+ Sbjct: 68 NKQMKIQIVLPSYADVKQSKISILAPLSVAIIGFKENDEVDWELPAGIKTLKIVAVD 124 >UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQZ8_BDEBA Length = 138 Score = 79.8 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +E +LS A VI ++P N V + V L+ S +E +V +A ++ +S+ + Sbjct: 36 LEEELSRANVIAQKEIPKN-VVTMNSRVQFLDEVSGQESEMTLVYPQDAKLEEGRLSILA 94 Query: 125 PIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 P+ L+G + K P G+ + +V V Y Sbjct: 95 PVGIALLGLSVGQEINWKLPNGQSKKLKVQAVTY 128 >UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actinomycetales RepID=A1TEF4_MYCVP Length = 159 Score = 79.8 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 17/155 (10%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + MT + E L +EL L +V P + D + A +E RI+ Sbjct: 7 VWMTPQAREDLEKELADLMAVPNPAGTDETERTDQVVDA-----WLARKE-------RIR 54 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATV-TVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 I LS A D + P + + V TV D+ + +T+ + AD + + +V Sbjct: 55 QIHELLSRA---DHSTSPADDGIAEPGMVLTVRFDDTGDTETFLLGTRGTADPELEVYTV 111 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVE 156 SP+ L+G + + P G + + V+ + Sbjct: 112 ASPLGSALLGAVPGEQRSFRLPNGSIQQVTVLAAK 146 >UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria RepID=B9MBQ3_DIAST Length = 135 Score = 79.0 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +EA+L A V D MP N V +TV L++ + T +V E D + +SV + Sbjct: 34 LEAELDRADVFDPKDMPPN-VVTMNSTVRFTLLETGKTNTLTLVYPKEMDGSGDKVSVFA 92 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+ L+G D + +P G+V V +++ Sbjct: 93 PVGIALLGLGVGDEFQMPSPTGQVTVRVDAIDF 125 >UniRef50_UPI0001B58AC8 GreA/GreB family elongation factor n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58AC8 Length = 148 Score = 77.9 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 4/110 (3%) Query: 47 EYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYR 106 + E++ + RI+ ++ L NA V + P + + V + D +T+ Sbjct: 32 DGDDQFERRQHRQARIRQLQDLLQNAVVGED---PPDDGIAEPGMVLTVRYDDGGVETFL 88 Query: 107 IVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + DE + S +SP+ R L G + + + P G + V VE Sbjct: 89 LAARDEVGGGLEVYSPDSPLGRALHGAKPGEQREYEVPSGAL-VRVTLVE 137 >UniRef50_C7MX98 Transcription elongation factor n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MX98_SACVD Length = 154 Score = 77.9 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 9/156 (5%) Query: 1 MQAIP-MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCE 59 M + P ++ +L EL+ L+ +R E++ + E GD + A+ E + Sbjct: 1 MTSTPGLSPATRSRLERELEQLRK-QRAELLPRLGE-DPLGDSADQADLVERSEVVSRLD 58 Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ-N 118 RI ++ L + Q+ ++ G VT+ D E + EAD + Sbjct: 59 RRINEVVDLL-HGQISTESEGGLPS----GTKVTLRFDDGSVEDMVVVGVAAEADEDDTS 113 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 ++ +SP+ + L G +E D V +TP GEV E++K Sbjct: 114 TLTADSPLGQALAGHQEGDTVTYRTPKGEVTAEIVK 149 >UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycobacterium RepID=A4T6M8_MYCGI Length = 157 Score = 77.5 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 23/149 (15%) Query: 1 MQA---IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGF 57 MQ I M+ + E L +EL L + P + +A + A +E Sbjct: 1 MQPADTIWMSPQTRESLEQELAALMAAPGPAGSDEVVDA-----------WLARKE---- 45 Query: 58 CEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 RI+ I L+ A+ ++G G +TV D+ + +T+ + D + Sbjct: 46 ---RIRQIHELLTKAE--HAVDPADDGVAEPGMVLTVRFDDAGDTETFLLGTRATVDSEL 100 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGG 146 ++ SVNSP+ L+G + P G Sbjct: 101 DVYSVNSPMGSALLGATPGQQRSYQLPNG 129 >UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteobacteria RepID=Q7MD62_VIBVY Length = 135 Score = 77.5 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 5/112 (4%) Query: 48 YHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRI 107 A E+ ++ +E +L A V+ +MP+N V +TV + SD+ + Sbjct: 17 ISALLEKMANLSPELEKLENELDRANVLAPQQMPDN-IVTMNSTVRFTFVGSDKVMEKTL 75 Query: 108 VGDDEA-DFKQNLISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 V D+ + +S+ +P+ L+G + PGG E E+++V Y Sbjct: 76 VYPDQVRNPDD--VSIFAPVGSALLGLSVGQQLTWPMPGGAERTIEILEVTY 125 >UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD Length = 125 Score = 77.1 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 1/91 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++A+L A + ++P++ V + + N+ + +E T+++V +EA+ K +SV + Sbjct: 33 LQAELKAATIYTEEELPSD-VVCLKSEARIANVKTGKEFTFKLVMPEEANIKAQKVSVFA 91 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 PI L G D + + P G EF++++V Sbjct: 92 PIGIALFGYRTGDSINWEMPDGIQEFKILEV 122 >UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae RepID=C6WYK0_METML Length = 125 Score = 77.1 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +LS A V+ ++P + V + V L+ S + +V + AD K ISV S Sbjct: 26 LGDELSRAIVVPADQVPAD-VVRINSRVIYLDESSGLSREVELVFPEGADLKFGKISVLS 84 Query: 125 PIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 P+ L+G +E V+ P G+ +V+ V Sbjct: 85 PVGSALLGLKEGQVIDWPFPHGQSRRLKVVSVA 117 >UniRef50_C0ZE34 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE34_BREBN Length = 164 Score = 76.0 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 55/113 (48%), Gaps = 9/113 (7%) Query: 50 AAREQQGF---CEGRIKDIEAKLSNAQVIDVTKMPNNGRVI--FGATVTVLNLDSDEEQT 104 +E+Q + + +E+ L+ + + + + + I G++V VL + E++ Sbjct: 47 YGKEKQAIDEIVDRYKQTLESLLAK----EDSALFQSLKAITLLGSSVKVLFEEDQFEES 102 Query: 105 YRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 + +V + D N IS SPI R L+ D VV+++P G + +V ++ + Sbjct: 103 FTVVYPTDIDPDNNRISFLSPIGRQLLLAAPHDSVVLESPVGRQQVQVREISF 155 >UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burkholderia RepID=Q13WN5_BURXL Length = 136 Score = 76.0 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Query: 59 EGRIKD-IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 + R++D ++ L A ++D ++P N V + T+++ S E T+ +V ADF Sbjct: 27 DARLQDMLDDVLERAVIVDSHEIPAN-VVTMNSQATLVDETSGEHMTWTVVYPPNADFAH 85 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 ++V SP L+G + + + P G + V+K+E Sbjct: 86 GRLNVFSPAGLALLGAKRGERIRFTPPSGTEK--VLKLE 122 >UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular organisms RepID=B4RF21_PHEZH Length = 214 Score = 76.0 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L A V+ + V G+TV + +++ +T +V D AD N +SV S Sbjct: 121 LARELDRAIVVREGEKSRPF-VRLGSTVEYRDRLTEKVRTVELVPPDAADIDANRLSVLS 179 Query: 125 PIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 P+ L+G D P G V V Sbjct: 180 PVGAALLGLSVGDTFSWTAPDGRPRVVTVEAVR 212 >UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Bradyrhizobiaceae RepID=Q3SU57_NITWN Length = 151 Score = 76.0 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 22/150 (14%) Query: 18 LDFLKSVRRPEIIAAIAEAREHGDLKENA--EYHAAREQQGFCEGRIKDIEAKLSNAQVI 75 LD LK P I + + L E A +Y A E + ++ A++I Sbjct: 2 LDNLKKTHLPAIAISAHDIDRLRHLAEAAIEKYPATAE----------FLAREIDRAEII 51 Query: 76 DVTKMPNNGR---------VIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPI 126 + V + VT ++ S +++ +V ++AD IS+ SPI Sbjct: 52 PADGSLLDDTRDQRWKVNLVTMQSEVTFIDDVSGQKRRVTLVYPEDADVDAGKISILSPI 111 Query: 127 ARGLIGKEEDDVVVIKTPGGE-VEFEVIKV 155 LIG + +TP G VI V Sbjct: 112 GAALIGLSAGQSIEFQTPSGGWRSLTVIAV 141 >UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Brucella RepID=A9MBQ4_BRUC2 Length = 169 Score = 74.4 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 3/93 (3%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++ A+L A+V+ ++P N V G+TV + E+ +V EAD +N IS+ Sbjct: 38 ELMAELDRAKVVTAKRIPEN-VVQMGSTVEFR-ANDGHERRVTLVYPGEADIAKNRISIL 95 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKV 155 +PI LIG + G+ E V+KV Sbjct: 96 TPIGTALIGLAPGQSISWTARDGKQHELNVLKV 128 >UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 Tax=Pseudomonas fluorescens RepID=Q3K4S3_PSEPF Length = 136 Score = 74.4 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++ +L A + V + V S ++ +V A+ + +S+ + Sbjct: 33 LQTELDRADTLVGHDEVPADVVTMNSRVHCREESSGKDYHLTLVYPKHANADEGKVSILA 92 Query: 125 PIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 P+ L+G + + PGG+ ++ +++VE Sbjct: 93 PVGSALLGLKVGQHIDWPAPGGKTLKLTLLEVE 125 >UniRef50_C1YJ21 Transcription elongation factor n=3 Tax=Actinomycetales RepID=C1YJ21_NOCDA Length = 162 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 56/147 (38%), Gaps = 12/147 (8%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGD-LKENAEYHAAREQQGFCEGRIK 63 MT E+LREEL L++ P+ R GD L H +Q R+ Sbjct: 8 WMTREAYERLREELRTLRA--LPDDDPGTGADRGAGDVLPAPRYIHDPAVRQ----ARVH 61 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--LIS 121 IE LS A V + + + V + D +EE ++G +A + S Sbjct: 62 TIERLLSEAVV---DEAAPDDGIAAPGKVLTIRYDGEEEDEVFLLGVRDASVADRMTVYS 118 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEV 148 SP+ L+G + + P G V Sbjct: 119 PESPLGAALVGARQGERRTFTAPRGAV 145 >UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155 Tax=Enterobacteriaceae RepID=RNK_ECO57 Length = 136 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 2/94 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + A+L AQ+ +MP++ V + V NL E + +V + +SV + Sbjct: 34 LNAELDRAQMCSPEEMPHD-VVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMA 92 Query: 125 PIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 P+ L+G D + + PGG EV+++EY Sbjct: 93 PVGAALLGLRVGDSIHWELPGGVATHLEVLELEY 126 >UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methylobacterium RepID=B8IFL5_METNO Length = 141 Score = 73.3 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L AQ++ + V G V + + Q +V EA+ +Q ISV + Sbjct: 45 LADELDRAQIV-AGRGRLPPFVRMGCQVEFRDDTTGRVQIVTLVYPGEANIEQGKISVLT 103 Query: 125 PIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 PI LIG + +T G V+ V Sbjct: 104 PIGAALIGLSTGQSITWETRSGLTKSLTVLDVR 136 >UniRef50_UPI000190F158 transcription elongation factor GreA n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-0664 RepID=UPI000190F158 Length = 62 Score = 73.3 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 45/58 (77%), Positives = 45/58 (77%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFC 58 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLK GF Sbjct: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKRKRGVSCCTRTAGFL 58 >UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746B72 Length = 137 Score = 72.9 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 3/123 (2%) Query: 36 AREHGDLKENAEYHAAREQQGFCEGRIKDIE-AKLSNAQVIDVTKMPNNGRVIFGATVTV 94 A DL + + + R + + +L +A+V + V V Sbjct: 8 AISQSDLHTLRTFLDHDDAFNPLDARERSLLIERLQDAKVFEDESDDEPSVAGLQTLVRV 67 Query: 95 LNLDSD--EEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEV 152 +L + ++ + +V EA+F+ + IS+ SP+ + G+ VV+ +P G V Sbjct: 68 EDLSTSPPDQFDFTLVLPHEANFEDDQISILSPLGAAVFGRSAGTQVVMDSPTGTRRLLV 127 Query: 153 IKV 155 + V Sbjct: 128 LAV 130 >UniRef50_UPI0001AEE145 nucleoside diphosphate kinase regulator n=1 Tax=Streptomyces albus J1074 RepID=UPI0001AEE145 Length = 160 Score = 72.9 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 7/153 (4%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAR-EHGDLKENAEYHAAREQQGFCEGR 61 +P++ L +EL R + A + + GD + A+ + R Sbjct: 5 PLPISAAARHALEQELAD-VRAERETVAATLQDPDIVAGDRGDAADQLQRSGDLARLDAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+DI +L A D P G V G+TVTV D EQT I G+ + +L++ Sbjct: 64 IEDITTRLRQA---DDAGPPPAGVVGVGSTVTVRF-DDGAEQTVSI-GEVTQGYDASLVT 118 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 +SP+ + L+G D V +TP GE V+ Sbjct: 119 ADSPLGKALMGCRPGDAVRYRTPDGEAGAVVVS 151 >UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EFF1_9RHOB Length = 146 Score = 72.5 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Query: 67 AKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPI 126 ++ AQ+++ +MP + V G+ VT + + + ++ +V ++AD ++ +SV +PI Sbjct: 48 EEIGRAQIVEDQQMPGD-VVGIGSKVTYRDETTGQNKSVTLVYPEDADITRSQVSVITPI 106 Query: 127 ARGLIGKEEDDVVVIKTPGGEVE--FEVIKVE 156 L+G E T ++KVE Sbjct: 107 GVALLGLREGASFYWDTRRENQRHMLTILKVE 138 >UniRef50_UPI0001AF7314 transcription elongation factor GreA n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF7314 Length = 160 Score = 72.1 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 19/147 (12%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAR-EQQGFCEG 60 Q ++ + E+L+ +L L+ ARE D +++ + + Q + Sbjct: 10 QRDWISSQAYERLQRKLADLRQ----------RSAREPAD----SDFDNSAPDVQRAWQT 55 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADF-KQNL 119 RI+ I L A V + P++G G +TV D+ + +T+ ++G A+ + Sbjct: 56 RIRRIHDLLVRADVGE--DPPDDGIAEPGMVLTVRYHDTGDTETF-LLGARGAEHCDVEV 112 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGG 146 S SP+ +IG + PGG Sbjct: 113 YSPRSPLGAAVIGAIPGEQRSFTLPGG 139 >UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Bacteria RepID=Q4KB20_PSEF5 Length = 379 Score = 71.7 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E +L A V+ ++ N + + + DEE +V ++AD S Sbjct: 277 IVELEHELERAIVVKPQQVARN-VITMNSRALLQL--DDEEIEVALVYPEDADSTAGKHS 333 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V S I ++G +E D + + E+ KV Y Sbjct: 334 VYSDIGAAILGYQEGDTIDWRISDRTRRIEIRKVLY 369 >UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bacteria RepID=A4XNX9_PSEMY Length = 135 Score = 71.7 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++A+L A+V+ + ++P G V + V S ++ +V +A + +S+ + Sbjct: 34 LQAELDRAEVVGLDEVP-AGLVTMNSRVHCREESSGKDYHLTLVYPQDA-GGEGTVSILA 91 Query: 125 PIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 P+ L+G + PGG+ ++ ++ VEY Sbjct: 92 PVGSALLGLSVGQHIDWPAPGGKQLKLTLLAVEY 125 >UniRef50_A1TUC9 GreA/GreB family elongation factor n=4 Tax=Burkholderiales RepID=A1TUC9_ACIAC Length = 136 Score = 71.7 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 1/83 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + L NA V ++ V + V +++ + Q I +AD +SV S Sbjct: 34 LADLLENADVT-SSRTVEADVVTMYSRVELVDTATGARQVLTICYPRDADLAAGFVSVLS 92 Query: 125 PIARGLIGKEEDDVVVIKTPGGE 147 P+ L+G TP GE Sbjct: 93 PVGSSLLGLRVGQTARWCTPRGE 115 >UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizobiales RepID=A6X582_OCHA4 Length = 142 Score = 71.7 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 3/94 (3%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++ +L A+V+ ++P N + G+TV + + +E+ +V EAD Q IS+ Sbjct: 38 ELMVELDRAKVVPAKRLPQN-VIHMGSTVEFRS-NDGQERRVTLVYPGEADIAQGKISIL 95 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVE 156 +PI LIG + G+ E V+ V Sbjct: 96 TPIGTALIGLAPGQSISWTARDGKQHELNVLSVS 129 >UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6Y2_VIBME Length = 136 Score = 71.7 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Query: 48 YHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRI 107 A ++ ++ +E +L A V++ ++P + V +TV SD+ + Sbjct: 18 ISALMDKLPKLSKELERLENELDRATVLNPEEIPAD-VVTMNSTVKFKFQGSDDVMQKTL 76 Query: 108 VGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKV 155 V + + IS+ +P+ L+G + + P G E E+I + Sbjct: 77 VYPHDVKGNDD-ISIFAPVGSALLGLSKGQQLTWPMPNGVERTIEIIDI 124 >UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VGM9_SPHWW Length = 137 Score = 71.7 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 10/136 (7%) Query: 22 KSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMP 81 K+ RRP I +EA DL +A + Q E +L A + ++P Sbjct: 5 KAARRPPIHMIDSEADILADLATSAATRLPQVSQLLLE--------ELGRATIHKADRIP 56 Query: 82 NNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVI 141 + V + V + S +E Y++V +AD + IS+ +P+ GLIG ++ Sbjct: 57 GD-IVTMHSVVQFTDAASGKEHRYQLVYPKDADIAEGRISILTPVGAGLIGLRAGQSILW 115 Query: 142 KTPGG-EVEFEVIKVE 156 G E + KV Sbjct: 116 PDRDGHERLLTIAKVS 131 >UniRef50_A7HAZ2 GreA/GreB family elongation factor n=5 Tax=Myxococcaceae RepID=A7HAZ2_ANADF Length = 138 Score = 71.7 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 5/98 (5%) Query: 59 EGRIKD-IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 + R + ++A+L A I+V V A V ++L S + +V +AD Sbjct: 29 DARAAEQLDAELDRAVPIEVAPP---DLVTMNARVAFVDLASGVRRELVLVYPRDADVAA 85 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIK 154 +SV +PI L+G + + P G V ++ Sbjct: 86 GRVSVLAPIGAALLGLSVGEEIDWPLPDGRVARLRILS 123 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Pr... 185 4e-46 UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Pr... 180 9e-45 UniRef50_P64276 Transcription elongation factor greA n=48 Tax=de... 180 1e-44 UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfob... 176 2e-43 UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Pr... 175 3e-43 UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Ba... 175 5e-43 UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Prote... 173 1e-42 UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syn... 173 1e-42 UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=B... 171 7e-42 UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gam... 171 7e-42 UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangi... 171 8e-42 UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Pro... 169 3e-41 UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Des... 168 4e-41 UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Ri... 167 8e-41 UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultur... 167 8e-41 UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria R... 167 9e-41 UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Ba... 166 2e-40 UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylob... 164 1e-39 UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Cl... 163 1e-39 UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylob... 163 1e-39 UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Pla... 163 1e-39 UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pir... 163 2e-39 UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Pr... 163 2e-39 UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syn... 163 2e-39 UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehaloco... 162 3e-39 UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clo... 162 3e-39 UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=c... 162 3e-39 UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobac... 161 4e-39 UniRef50_UPI00016C498C transcription elongation factor greA n=1 ... 161 4e-39 UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bac... 161 7e-39 UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neo... 161 8e-39 UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergis... 160 1e-38 UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cell... 160 1e-38 UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus ... 159 3e-38 UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Pr... 158 4e-38 UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuoke... 158 6e-38 UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cel... 158 7e-38 UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chl... 158 8e-38 UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Pr... 157 8e-38 UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria... 157 8e-38 UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiother... 157 1e-37 UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Pr... 156 2e-37 UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=P... 156 2e-37 UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostrid... 156 3e-37 UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Ba... 155 3e-37 UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erw... 155 4e-37 UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Fi... 155 5e-37 UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibro... 154 8e-37 UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteob... 153 1e-36 UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerob... 153 2e-36 UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Deh... 153 2e-36 UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Ricketts... 151 5e-36 UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrob... 151 6e-36 UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Ba... 151 7e-36 UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Ga... 150 1e-35 UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myx... 150 1e-35 UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=The... 150 2e-35 UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobac... 148 4e-35 UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Ga... 148 4e-35 UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veill... 148 6e-35 UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotel... 148 7e-35 UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 ... 148 7e-35 UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Pr... 147 9e-35 UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Ga... 147 1e-34 UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidat... 147 1e-34 UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacter... 146 2e-34 UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Pro... 146 2e-34 UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Ba... 146 3e-34 UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicut... 146 3e-34 UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=De... 145 3e-34 UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellu... 145 3e-34 UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Sti... 145 4e-34 UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostrid... 145 4e-34 UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctom... 145 4e-34 UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 ... 145 5e-34 UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Myc... 145 5e-34 UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylob... 144 8e-34 UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Myc... 144 9e-34 UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultur... 143 1e-33 UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Pro... 143 2e-33 UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipel... 143 2e-33 UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococ... 143 2e-33 UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mol... 142 3e-33 UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotr... 142 3e-33 UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Myc... 142 4e-33 UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteri... 142 4e-33 UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroi... 141 6e-33 UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=La... 141 8e-33 UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Bo... 141 8e-33 UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clo... 140 1e-32 UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 ... 140 1e-32 UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntr... 140 1e-32 UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=L... 140 2e-32 UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia ... 140 2e-32 UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Pol... 139 2e-32 UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chrom... 139 4e-32 UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Act... 138 4e-32 UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acido... 138 5e-32 UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Ba... 138 6e-32 UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=The... 138 6e-32 UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chtho... 138 8e-32 UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachysp... 137 9e-32 UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostrid... 137 1e-31 UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia ... 136 2e-31 UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Th... 136 2e-31 UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobac... 136 3e-31 UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospi... 135 4e-31 UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Saliniba... 135 6e-31 UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinse... 135 7e-31 UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobac... 134 8e-31 UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria... 134 8e-31 UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 ... 134 1e-30 UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinop... 134 1e-30 UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 ... 134 1e-30 UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Myc... 133 1e-30 UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostri... 133 2e-30 UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Prote... 132 4e-30 UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verru... 132 4e-30 UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Aci... 131 5e-30 UniRef50_B3DVF3 Transcription elongation factor GreA fused to un... 131 6e-30 UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Ach... 131 7e-30 UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobac... 130 1e-29 UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothe... 130 1e-29 UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacte... 130 2e-29 UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax... 130 2e-29 UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Hal... 130 2e-29 UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Myc... 129 3e-29 UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Tre... 128 4e-29 UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusi... 128 5e-29 UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akker... 128 5e-29 UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Ba... 128 6e-29 UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacte... 128 7e-29 UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bactero... 128 7e-29 UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidi... 127 9e-29 UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostri... 126 2e-28 UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Fi... 126 2e-28 UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=F... 126 3e-28 UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Ac... 126 3e-28 UniRef50_UPI0001746370 transcript cleavage factor/unknown domain... 125 5e-28 UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisp... 125 6e-28 UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermoba... 125 7e-28 UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victi... 124 7e-28 UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bi... 123 1e-27 UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Acti... 123 1e-27 UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candida... 123 2e-27 UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Co... 123 2e-27 UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Co... 121 5e-27 UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachl... 120 1e-26 UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia m... 120 2e-26 UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Ch... 120 2e-26 UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomy... 119 2e-26 UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pse... 119 4e-26 UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clost... 118 4e-26 UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxa... 118 6e-26 UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bif... 118 6e-26 UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ur... 118 7e-26 UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobac... 117 1e-25 UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromon... 117 1e-25 UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methy... 117 1e-25 UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Fla... 117 1e-25 UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exigu... 116 2e-25 UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitu... 114 1e-24 UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh... 113 1e-24 UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9... 113 2e-24 UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desul... 113 3e-24 UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaer... 111 6e-24 UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chtho... 111 7e-24 UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spiro... 111 7e-24 UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bac... 109 2e-23 UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 T... 109 4e-23 UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophag... 108 5e-23 UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB famil... 108 5e-23 UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deino... 108 5e-23 UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Ta... 108 8e-23 UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodo... 108 9e-23 UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococ... 108 9e-23 UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methy... 106 2e-22 UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gem... 106 2e-22 UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Prote... 106 3e-22 UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacte... 104 7e-22 UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 T... 104 8e-22 UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltapro... 104 8e-22 UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostrid... 104 1e-21 UniRef50_Q88Q22 Transcription elongation factor, putative n=11 T... 104 1e-21 UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphin... 103 2e-21 UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 T... 103 3e-21 UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betap... 102 4e-21 UniRef50_C6UNA6 Putative transcription elongation factor GreA n=... 102 4e-21 UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 T... 102 4e-21 UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desul... 101 1e-20 UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cell... 100 1e-20 UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospi... 100 1e-20 UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deino... 100 2e-20 UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=unc... 100 2e-20 UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Prot... 99 3e-20 UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitu... 99 4e-20 UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Prot... 99 4e-20 UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitu... 98 6e-20 UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobac... 98 8e-20 UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphin... 98 8e-20 UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax... 98 8e-20 UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betap... 98 9e-20 UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochro... 98 1e-19 UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candi... 98 1e-19 UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Brady... 98 1e-19 UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein,... 98 1e-19 UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 T... 97 1e-19 UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actin... 97 2e-19 UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteoba... 97 2e-19 UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms Re... 96 3e-19 UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=... 95 6e-19 UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax... 95 9e-19 UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteob... 94 1e-18 UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein,... 94 1e-18 UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococ... 94 1e-18 UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=... 94 2e-18 UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 T... 94 2e-18 UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein,... 93 2e-18 UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, famil... 93 2e-18 UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobac... 93 2e-18 UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methy... 93 3e-18 UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain... 92 4e-18 UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/G... 92 4e-18 UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavo... 92 4e-18 UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycob... 92 5e-18 UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Bruc... 92 5e-18 UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155... 92 6e-18 UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizo... 92 7e-18 UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methy... 92 8e-18 UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alph... 91 1e-17 UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Ba... 91 1e-17 UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acine... 91 1e-17 UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novos... 90 2e-17 UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Ocean... 90 2e-17 UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 T... 90 2e-17 UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular... 90 3e-17 UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methy... 89 5e-17 UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bact... 88 6e-17 UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhi... 88 7e-17 UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator p... 88 1e-16 UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalo... 87 1e-16 UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseud... 87 1e-16 UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burk... 87 2e-16 UniRef50_Q5QX12 Transcription elongation factor family protein n... 87 2e-16 UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 ... 86 3e-16 UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotom... 86 3e-16 UniRef50_UPI0001AF7314 transcription elongation factor GreA n=1 ... 86 3e-16 UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphin... 85 5e-16 UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella... 85 5e-16 UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizo... 85 6e-16 Sequences not found previously or not previously below threshold: >UniRef50_Q1LSK1 Transcription elongation factor greA n=16 Tax=Proteobacteria RepID=GREA_BAUCH Length = 158 Score = 185 bits (470), Expect = 4e-46, Method: Composition-based stats. Identities = 116/158 (73%), Positives = 146/158 (92%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M IPMTLRGAE+LREEL++LK+VRRPEII IAEARE+GDLKENAEYHAAREQQGFCEG Sbjct: 1 MNQIPMTLRGAEQLREELNYLKNVRRPEIIRNIAEAREYGDLKENAEYHAAREQQGFCEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI++IE+KLS+AQ+IDVTK+ +G+V+FG TV+V NL+ +EEQTYRIVGDDEA+FK NLI Sbjct: 61 RIQEIESKLSHAQIIDVTKLFPSGKVVFGVTVSVQNLNINEEQTYRIVGDDEANFKHNLI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S++SPIARGLIGK++ D+V+IKTP GEV+++++K+EYL Sbjct: 121 SISSPIARGLIGKKKGDIVLIKTPRGEVKYQILKIEYL 158 >UniRef50_Q0A765 Transcription elongation factor greA n=23 Tax=Proteobacteria RepID=GREA_ALHEH Length = 158 Score = 180 bits (458), Expect = 9e-45, Method: Composition-based stats. Identities = 107/157 (68%), Positives = 128/157 (81%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +P+T RGAEKLREEL LK+V RP II AIAEAREHGDLKENAEYHAAREQQ F EG Sbjct: 1 MSKVPLTARGAEKLREELQRLKTVERPRIIQAIAEAREHGDLKENAEYHAAREQQSFVEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI++IE KLSNAQVID + G+VIFGATV +++ DS +E TY+IVG+DEAD KQ L+ Sbjct: 61 RIQEIEGKLSNAQVIDPAAVNAQGKVIFGATVDLVDEDSGKEVTYQIVGEDEADIKQGLV 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SVNSPIAR LIGKEE D+V ++ PGGE E+E+++V Y Sbjct: 121 SVNSPIARALIGKEEGDLVTVQAPGGEREYEIVEVRY 157 >UniRef50_P64276 Transcription elongation factor greA n=48 Tax=delta/epsilon subdivisions RepID=GREA_HELPJ Length = 164 Score = 180 bits (457), Expect = 1e-44, Method: Composition-based stats. Identities = 79/157 (50%), Positives = 107/157 (68%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M PM++ G K+ EL LK V RP I+ I AR HGDLKENAEYHAA+E+Q F E Sbjct: 1 MNKEPMSMHGYNKICAELKQLKEVERPNIVKEIDIARGHGDLKENAEYHAAKEKQRFIEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI D+ ++NAQVID + + +N +V FG+T+ +LNLD+D+E +Y IVG E+D + LI Sbjct: 61 RIVDLSEIVANAQVIDPSALAHN-KVSFGSTIKILNLDNDKEFSYTIVGSVESDPAKGLI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S SPIA+ LIGK + D V I+ P GE +FE++ + Y Sbjct: 120 SFGSPIAKSLIGKSKGDAVSIQLPNGESDFEILDIYY 156 >UniRef50_C0QKN0 Transcription elongation factor n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKN0_DESAH Length = 175 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 1/155 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 + IP+T+ G L+EEL LK++ RP+ I AI AR HGDL ENAE+ AA+++Q F EG Sbjct: 21 LDQIPITIEGYAALKEELQRLKTIERPQNIKAIEIARAHGDLSENAEFDAAKDRQSFIEG 80 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ K+++A++ID + + V F + V + NLDS EE Y IVG +E+D + I Sbjct: 81 RIGELGYKIASAKIIDPATVSKDC-VRFASRVVIENLDSGEEVEYMIVGQEESDIHKGKI 139 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SV+SP+ L+GK+ D +VI+ PGG+ +E++ + Sbjct: 140 SVSSPLGMALLGKQPGDEIVIQAPGGKRNYEIVDI 174 >UniRef50_B3E3H5 Transcription elongation factor greA n=19 Tax=Proteobacteria RepID=GREA_GEOLS Length = 158 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 78/156 (50%), Positives = 107/156 (68%), Gaps = 1/156 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 IP+T E L+EEL L RP++I IAEAR HGDL ENAEY AA+ +QGF EGR Sbjct: 3 NNIPLTKESYEALQEELKRLIREERPKVIQDIAEARSHGDLSENAEYDAAKNRQGFIEGR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++++ KL+ A V+D+T + + V FGATVT+ + S+EE TY+IVG+DEAD K IS Sbjct: 63 IQELQGKLARAHVVDLTGLKPDKVV-FGATVTLYDTASEEEITYKIVGEDEADIKLGKIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+ + LIG + DD V +K P G E+E+I+++Y Sbjct: 122 CTSPVGKALIGHKLDDSVKVKVPAGTKEYEIIEIKY 157 >UniRef50_B2S6W5 Transcription elongation factor greA n=39 Tax=Bacteria RepID=GREA_BRUA1 Length = 157 Score = 175 bits (443), Expect = 5e-43, Method: Composition-based stats. Identities = 84/158 (53%), Positives = 116/158 (73%), Gaps = 1/158 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ PMT RG EKL+EEL + + RP II AIAEAR HGDL ENAEYHAA+E Q EG Sbjct: 1 MEKFPMTPRGFEKLKEELRWRQQSERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++E ++ A+VIDV+K+ + R+ FGATVT+++ D++EE+ Y+IVGD EAD K+ I Sbjct: 61 RINELEDLVARAEVIDVSKLTGD-RIKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S++SPIAR LIGK E D + + PGG +E+I ++++ Sbjct: 120 SISSPIARALIGKGEGDTIEVNAPGGSRSYEIIALKFV 157 >UniRef50_Q1H0G6 GreA/GreB family elongation factor n=3 Tax=Proteobacteria RepID=Q1H0G6_METFK Length = 165 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 92/156 (58%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T G +L++E + L V RP++++ +A A +GD EN +Y +++ + R Sbjct: 4 QKNYITPEGYARLKDEFEQLYKVERPKVVSDVAWAASNGDRSENGDYIYGKKRLRQIDSR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ + ++ A V+D + + ++ FGA V + ++D D E YRIVG DE D + IS Sbjct: 64 LRFLMKRMDIAVVVDPAQQQDLEKIYFGAWVELYSIDKDSEHHYRIVGQDELDPGKGYIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+AR L+GK+ DV+ ++TP GE FE++ V Y Sbjct: 124 WISPLARALLGKQPGDVIRVETPAGEERFEIVDVSY 159 >UniRef50_Q2LR03 Transcription elongation factor greA n=1 Tax=Syntrophus aciditrophicus SB RepID=GREA_SYNAS Length = 161 Score = 173 bits (439), Expect = 1e-42, Method: Composition-based stats. Identities = 68/155 (43%), Positives = 101/155 (65%), Gaps = 1/155 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ +P+T G E L++EL+ LK V P I I AR HGDL ENAEY AA+E+Q F G Sbjct: 1 MEKMPITKSGFENLKKELEHLKCVLIPANIKDIEIARAHGDLSENAEYTAAKEKQSFLHG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +++++E L+ + VID+ KM ++ R++FGATV + + ++ Y++VG E++ +N I Sbjct: 61 KLQELENNLALSNVIDL-KMLSDDRIVFGATVIIEEASTGKQTNYQLVGPFESNISENKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SV SPI + LIGK D V + TPGG FEV+ + Sbjct: 120 SVTSPIGKALIGKSIGDEVKVHTPGGIRNFEVVDI 154 >UniRef50_B4UCU9 Transcription elongation factor greA n=588 Tax=Bacteria RepID=GREA_ANASK Length = 166 Score = 171 bits (433), Expect = 7e-42, Method: Composition-based stats. Identities = 87/158 (55%), Positives = 116/158 (73%), Gaps = 1/158 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 MQ +PMT G +L++EL LKSV RP+I+ IAEAR HGDL ENAEYHAA+E+Q EG Sbjct: 1 MQRVPMTKGGLVRLKDELRRLKSVERPKIVKEIAEARAHGDLSENAEYHAAKEKQSHIEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI +E +++A+VIDVTK + V FGATV++ + +S ++ TYRIVG+ EAD KQ I Sbjct: 61 RIAQVEHWIASAEVIDVTKHAGDRVV-FGATVSLEDAESGDQVTYRIVGELEADLKQGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 SV SPIAR LIG+ E D VV+++PGGE E+E+ V ++ Sbjct: 120 SVTSPIARALIGRSEGDTVVVRSPGGEKEYEIQSVAFV 157 >UniRef50_A5CVW9 Transcription elongation factor greA n=4 Tax=Gammaproteobacteria RepID=GREA_VESOH Length = 159 Score = 171 bits (433), Expect = 7e-42, Method: Composition-based stats. Identities = 85/157 (54%), Positives = 111/157 (70%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M IP+T GA+ L L LK V RP II I AR HGDLKENAEYHAA+E+Q F EG Sbjct: 1 MNNIPVTAFGAKALEAALLKLKDVSRPRIIEDIRIARAHGDLKENAEYHAAKEEQSFVEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK+IE KLS Q+IDVTK+ +GR +FG T+T++N + E TY+IVG+DEAD + I Sbjct: 61 RIKEIELKLSRMQIIDVTKLSQDGRCVFGTTITLMNSVDNSEITYQIVGEDEADISLDKI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S +SPIA L+G EE D V++K P G++ ++++ VEY Sbjct: 121 SCHSPIASALMGNEEGDKVIVKAPKGDIVYKILSVEY 157 >UniRef50_D0LKY5 Transcription elongation factor n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKY5_HALO1 Length = 169 Score = 171 bits (433), Expect = 8e-42, Method: Composition-based stats. Identities = 77/157 (49%), Positives = 102/157 (64%), Gaps = 1/157 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 PMT G ++ +L LK V RP AI AR HGDL ENA+Y AA+E+QG E R Sbjct: 3 DKFPMTPSGHAWMKAQLKKLKEVDRPANAKAIEVARGHGDLSENADYDAAKEEQGMIEAR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++ EAKL+ ++VID TK+ RV FGATVTV ++D+ +E TY IVG+ EAD K IS Sbjct: 63 IREYEAKLALSEVIDPTKLSGE-RVKFGATVTVEDIDTGDEATYTIVGEHEADIKNKRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 V +P+AR LIGK D ++TP G FE++ V++L Sbjct: 122 VTAPVARALIGKAIGDETQVQTPKGTRAFEIVDVKWL 158 >UniRef50_A8HR94 Transcription elongation factor greA n=5 Tax=Proteobacteria RepID=GREA_AZOC5 Length = 157 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 83/157 (52%), Positives = 113/157 (71%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ IPMT G L EEL F + V RP II+AI+EAR HGDL ENAEYHAA+E Q EG Sbjct: 1 MEKIPMTGAGFVALEEELRFRQQVERPRIISAISEARAHGDLSENAEYHAAKELQSLNEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++E K+S A+VIDV+K+ + V FGATVT+++ D++EE+ ++IVGD EAD K I Sbjct: 61 RIAELEDKISRAEVIDVSKLSGD-IVKFGATVTLVDEDTEEERVWQIVGDSEADAKAGRI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+AR LIGK++ V + TP G FE+++V + Sbjct: 120 SISSPVARALIGKKKGSSVEVVTPKGARSFEIVEVRW 156 >UniRef50_Q725M4 Transcription elongation factor greA n=4 Tax=Desulfovibrionaceae RepID=GREA_DESVH Length = 163 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 74/158 (46%), Positives = 112/158 (70%), Gaps = 2/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +IP+++ G ++L +ELD LK RP +I AI EARE GDL ENA Y AARE+QG E Sbjct: 1 MSSIPISVEGFKQLEKELDRLKK-ERPGVIQAIKEAREEGDLSENAGYDAARERQGMLEA 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK IE++++ VID+ + + +V+FGATV + +L+S EE+ Y ++G DEAD+ + I Sbjct: 60 RIKYIESRMAQFNVIDLDTISGD-KVMFGATVKIEDLESGEEKEYTLLGPDEADYAKGSI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 SV SP+AR ++GKEE D +V+ P G++ +E++ + +L Sbjct: 119 SVQSPVARAMLGKEEGDEIVVDAPRGKIHYEIVSIRFL 156 >UniRef50_A8F083 Transcription elongation factor greA n=13 Tax=Rickettsia RepID=GREA_RICCK Length = 162 Score = 167 bits (424), Expect = 8e-41, Method: Composition-based stats. Identities = 77/155 (49%), Positives = 108/155 (69%), Gaps = 1/155 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 P+T +G +KL EL LK V R +I IAEAREHGDL ENAEY AARE+Q F EGRI Sbjct: 4 KFPITAKGFKKLEHELKHLKHVERKKISEDIAEAREHGDLSENAEYEAAREKQAFIEGRI 63 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 K++E + A++ID++K+ + + FGATVT+++ D++E+ TY +VG+ EAD + +S+ Sbjct: 64 KELEDMAARAEIIDISKLSGDN-IKFGATVTLIDDDTEEKVTYIVVGEYEADITRKRVSI 122 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SPIA+ LIGK D V + TP G +EV++VEY Sbjct: 123 ASPIAKALIGKSVGDFVEVTTPKGSKSYEVVEVEY 157 >UniRef50_Q2Z001 Transcription elongation factor n=1 Tax=uncultured candidate division OP8 bacterium RepID=Q2Z001_9BACT Length = 156 Score = 167 bits (424), Expect = 8e-41, Method: Composition-based stats. Identities = 71/157 (45%), Positives = 102/157 (64%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ P+T G +KL EL L+ V RP + AI EAR HGDL+ENA++ A+++Q G Sbjct: 1 MERYPITPEGLKKLEAELKRLREVDRPANVKAIEEARGHGDLRENADFKCAKDEQAMIVG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ ++S+A VID +K+ N V FGA V + NLD+ E YR+VG+DEAD +Q I Sbjct: 61 RIAYLQGRISHAAVIDPSKLSGNRVV-FGARVFLKNLDTGEPIVYRLVGEDEADIEQGSI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S+ SP+ARGLI +E + I P G FE++K+E+ Sbjct: 120 SITSPLARGLIRREVGEQAKIAVPSGIKSFEIVKIEF 156 >UniRef50_D0J5N8 Kelongation factor GreB n=4 Tax=Proteobacteria RepID=D0J5N8_COMTE Length = 231 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 85/155 (54%), Gaps = 1/155 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T +G +++++EL L RP+I+ + A +GD EN +Y +++ + RI Sbjct: 71 KNYITPQGYQRIKDELLDLIDNERPKIVEIVHWAASNGDRSENGDYLYGKKRLREIDRRI 130 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + +L A+V+D + +V FGATV+ ++ D E+T I+G DEAD QN +S Sbjct: 131 RFLTKRLEIAEVVDPAVHAGSDQVFFGATVSYVD-DEGVERTITIMGIDEADSAQNQVSW 189 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +P++R L+ D V + TP G E++ V Y Sbjct: 190 IAPVSRALLKARVGDEVALPTPAGVRMLEILDVSY 224 >UniRef50_A0AIU5 Transcription elongation factor greA n=99 Tax=Bacteria RepID=GREA_LISW6 Length = 160 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 72/154 (46%), Positives = 100/154 (64%), Gaps = 1/154 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMTL G KL EL LK+V+R E++ I AR GDL EN+EY +A+++Q F EGR Sbjct: 5 KVFPMTLEGKAKLENELQELKTVKRKEVVERIKIARSFGDLSENSEYDSAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I IE + NAQ+ID + +NG V G TVT + L EE+TY IVG EAD + IS Sbjct: 65 ITTIENMIRNAQIIDAAE-AHNGLVTLGNTVTFIELPDGEEETYTIVGSAEADPFEGKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +SPIA+GL+G +E + V I+TP G++ ++ K+ Sbjct: 124 NDSPIAKGLLGHKEGEEVTIQTPAGDMNVKIEKI 157 >UniRef50_D1B0C0 Transcription elongation factor n=4 Tax=Campylobacteraceae RepID=D1B0C0_SULD5 Length = 167 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 1/155 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 PMT G +KL +EL LK +RPE + + AR HGDLKENAEYHAA+E+ F + RI Sbjct: 4 KEPMTEYGYKKLTDELSDLKKRQRPETVIELDIARSHGDLKENAEYHAAKEKLAFIDSRI 63 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 ++ +S +QVID + ++ +V FG+T+T+ NL+++EE TY IVG E++ LIS Sbjct: 64 AELSDLVSRSQVIDPSTYEHD-KVRFGSTITLENLETNEEVTYSIVGSTESNPDLGLISY 122 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +SP+++ L+G+ D+ V+IK P G E+ ++ + Y Sbjct: 123 HSPLSKQLMGRCVDEEVMIKLPVGTQEYAILNITY 157 >UniRef50_A6LPL4 Transcription elongation factor greA n=30 Tax=Clostridia RepID=GREA_CLOB8 Length = 160 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + MT G +KL EL++LK+V+R EI I A +GDL EN+EY A+ Q F EGR Sbjct: 5 KQYVMTYEGVKKLESELEYLKTVKRKEITEKIKIALGYGDLSENSEYDEAKNDQAFTEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E L NA V+D +++P++ V G+ V V + + DEE Y IVG EAD IS Sbjct: 65 IIQLENMLKNAVVVDESEIPSD-IVSVGSKVKVKDYEFDEEVEYSIVGSAEADPMNFKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ L+GK+ DVV + P G +FE++ + Sbjct: 124 NESPVGNALVGKKVGDVVEVTVPDGVNKFEILGIS 158 >UniRef50_Q4HT85 Transcription elongation factor n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HT85_CAMUP Length = 161 Score = 163 bits (413), Expect = 1e-39, Method: Composition-based stats. Identities = 71/157 (45%), Positives = 101/157 (64%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ M+ G EKL EL LK +RP ++ I AR HGDLKENAEYHAARE+Q E Sbjct: 1 MEKEAMSSFGFEKLSAELKDLKDNQRPAVVVEIDVARSHGDLKENAEYHAAREKQALIES 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ LS AQVID + V FG++V +++L+S++E Y +VG E+D ++ I Sbjct: 61 RIAELGGILSRAQVIDPASYEHES-VKFGSSVLIMDLESEKESKYTLVGTCESDLEKGYI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S+ SP+AR ++GK+E D ++ P GE EFE++ V Y Sbjct: 120 SIASPLARAMLGKKEGDEFKVRLPKGESEFEILSVTY 156 >UniRef50_Q7UVA0 Transcription elongation factor greA n=3 Tax=Planctomycetaceae RepID=GREA_RHOBA Length = 159 Score = 163 bits (413), Expect = 1e-39, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 102/157 (64%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++++PMT G K++ E++ +++ P I+ IAEARE GDLKENAEYHA RE QG Sbjct: 2 VESVPMTREGYNKIKAEINRMENEEMPMIVQKIAEAREEGDLKENAEYHAQRENQGMLMA 61 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +I ++ K++ A +IDV+ +P + V FG TVTV ++ +E+ + +VG + D+ I Sbjct: 62 KINELRDKIARASIIDVSSLPKDEVV-FGCTVTVEDVAYGDEEQFTLVGAGDEDYDSGKI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V SP +GL+GK+ + + P G+++F+++K+E+ Sbjct: 121 LVTSPFGQGLVGKKVGETAEVDVPAGKLKFKILKIEF 157 >UniRef50_D2R891 Transcription elongation factor GreA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R891_9PLAN Length = 164 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 1/154 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 IPMT G KL+ ELD +++V P+I IA+AR GDLKENAEYHA RE QG + +I Sbjct: 5 IPMTREGYAKLKAELDRMENVDMPDITQKIADARAEGDLKENAEYHAQREAQGLLQAKIN 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 I KLS A +ID + MP + +V FG TV V ++D DEE+ + +VG E D+ I + Sbjct: 65 LIRNKLSKASIIDPSTMPRD-QVSFGTTVLVKDIDMDEEEEFTLVGAGEEDYNAGRILIT 123 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+ + L+GK+ DVV + P G + E++ +++ Sbjct: 124 SPLGQALVGKKIGDVVDVPAPKGSYQLEILTLKF 157 >UniRef50_Q88DU7 Transcription elongation factor greA n=83 Tax=Proteobacteria RepID=GREA_PSEPK Length = 160 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 91/156 (58%), Positives = 117/156 (75%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 PMT++GA L EE FL RP + AI EARE GDLKENAEYHAARE+QG E RI Sbjct: 5 KYPMTVQGARALEEEHLFLSKTERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARI 64 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 +DIE +L N+ VIDVT +P+ G+VIFG TV + N ++DEE TY+IVG+DEAD KQ +S Sbjct: 65 RDIEGRLQNSVVIDVTTIPHTGKVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSS 124 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 +PIAR +IGKEE D VV+KTP G VE+E+++V+++ Sbjct: 125 GAPIARAIIGKEEGDTVVVKTPSGTVEYEIVEVKHI 160 >UniRef50_A0LK20 Transcription elongation factor greA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=GREA_SYNFM Length = 156 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 68/156 (43%), Positives = 102/156 (65%), Gaps = 1/156 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +P+T G E+L+ EL L+ RP +I AI EAR HGD+ ENAEY AA+E+Q EG Sbjct: 1 MPRVPITKEGFERLKIELQRLQRDERPMVIRAIEEARSHGDISENAEYEAAKEKQAMIEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI+D+ K+ ++++ + +NGR IFG+TV V + ++ E +YR+VG EAD + I Sbjct: 61 RIQDLCQKMGECEIVEPSDN-DNGRAIFGSTVVVEDTETGEVTSYRLVGPYEADVQSGTI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SV SP+ + LIGKEE + + ++TP G EV+++ Sbjct: 120 SVVSPLGKALIGKEEGEEIRVQTPKGVRNIEVLEIR 155 >UniRef50_A5FRA2 Transcription elongation factor n=3 Tax=Dehalococcoides RepID=A5FRA2_DEHSB Length = 266 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 57/157 (36%), Positives = 93/157 (59%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ IPMT G +KL +EL LK V+R +I + A D++ENA YHAA+EQ+G EG Sbjct: 111 VEKIPMTASGYKKLEDELCILK-VKRIAVIEEMRLAALDKDMRENAPYHAAKEQRGQIEG 169 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK+IE +L +A+V + T N +V G TV + +L + E+ Y +V E + + I Sbjct: 170 RIKEIEHELKHAEVSEYTDN-NTSKVNMGNTVKLRDLKNGEQCIYTLVSPKEIEPLKGRI 228 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S +SPI + L + + D + I+ P G +++ + + + Sbjct: 229 SASSPIGKALFNRSKGDNIEIEVPSGTLQYVIEDISF 265 >UniRef50_Q97EB6 Transcription elongation factor greA n=6 Tax=Clostridiales RepID=GREA_CLOAB Length = 158 Score = 162 bits (410), Expect = 3e-39, Method: Composition-based stats. Identities = 62/155 (40%), Positives = 90/155 (58%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T +G +KL EEL++LK+ +R EI I A GDL EN+EY A+ Q F EGR Sbjct: 5 KKYVITYKGVKKLEEELEYLKTTKRKEITEKIKVALSFGDLSENSEYDEAKNDQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I IE L NA VID +++ N V G+ V V + DEE + IVG EAD +N IS Sbjct: 65 IAQIENMLKNANVIDESEL-KNDVVSVGSKVMVKDYQFDEEIEFSIVGSAEADPIENKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ LIGK+ D + + P G +++++ ++ Sbjct: 124 NESPVGSALIGKKVGDEIEVNVPDGVDKYKILAIK 158 >UniRef50_Q817Z6 Transcription elongation factor greA n=141 Tax=cellular organisms RepID=GREA_BACCR Length = 158 Score = 162 bits (410), Expect = 3e-39, Method: Composition-based stats. Identities = 69/155 (44%), Positives = 98/155 (63%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMT G +KL EL+ LK+VRR E++ I AR GDL EN+EY AA+++Q F EGR Sbjct: 5 KTYPMTQEGKQKLENELEQLKTVRRKEVVERIKIARSFGDLSENSEYDAAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E + NA +I T + V G TVT L + +E+ Y IVG EAD + IS Sbjct: 65 ITQLENMIRNAVIIKDTGEVST-VVTLGKTVTFKELPNGDEEAYTIVGSAEADPFEGRIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +SPIA+ L+GK+ + V I+TPGGE++ E++ V+ Sbjct: 124 NDSPIAKSLLGKQIGEKVTIQTPGGEMQVEIVSVK 158 >UniRef50_Q1AU03 Transcription elongation factor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AU03_RUBXD Length = 154 Score = 161 bits (409), Expect = 4e-39, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 89/151 (58%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G KL+EEL +L VRR E+ I +ARE GD+ EN+EY A+ +QG E RI ++ Sbjct: 1 MTPEGFAKLQEELKYLTEVRRKEVAERIRQAREFGDISENSEYDDAKNEQGLLERRISEL 60 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + +L NA+++D G V G VT+ + E+T++IVG +EAD +S SP Sbjct: 61 QRRLRNAKIVDPASSAEEGAVDLGTRVTLRVVGDGRERTFQIVGANEADPASGKLSHASP 120 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + + L+ + + V + TP G E+E++ VE Sbjct: 121 VGKALLRRRVGEKVRVSTPRGATEYEIVSVE 151 >UniRef50_UPI00016C498C transcription elongation factor greA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C498C Length = 161 Score = 161 bits (409), Expect = 4e-39, Method: Composition-based stats. Identities = 64/155 (41%), Positives = 98/155 (63%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 IPMT G +KL+ ELD L+ EI +A AR+ GDL ENAEYHAARE QG + R Sbjct: 4 DRIPMTREGYDKLKVELDRLRGAEMIEITKRVAAARDLGDLSENAEYHAAREDQGILQAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I + +LS A ++D + +P + V FG+ V VL++D DEE+T+ +V + + + I Sbjct: 64 IDALSDRLSRAVIVDTSNLPKD-TVAFGSKVRVLDVDVDEEETFELVSPGQENPDKGRIL 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPI +GLIG+++ D V I+ P G ++F+++++ Sbjct: 123 TGSPIGQGLIGRKKGDTVEIQVPSGTIKFKILEIS 157 >UniRef50_Q04EK0 Transcription elongation factor greA n=4 Tax=Bacilli RepID=GREA_OENOB Length = 162 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMT G KL+ ELD L + +RP I + I EAR GDL EN+EY +A+++Q F EGR Sbjct: 5 KTYPMTAEGLAKLQAELDDLITNKRPAITSRIQEARSFGDLSENSEYQSAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 +K ++ + AQVID + N V G ++ + +E+TY IVG E+D IS Sbjct: 65 VKQLQQMIQFAQVIDASSASKN-VVTLGKKISFKEVPDGDEETYTIVGSAESDPLSGKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTP-GGEVEFEVIKVE 156 +SP+ + L+ + D V I P V E++ V Sbjct: 124 NDSPMGKALLDHKTGDKVEIPLPENHSVTVEILHVS 159 >UniRef50_Q2GD99 Transcription elongation factor greA n=2 Tax=Neorickettsia RepID=GREA_NEOSM Length = 159 Score = 161 bits (407), Expect = 8e-39, Method: Composition-based stats. Identities = 71/157 (45%), Positives = 111/157 (70%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ +P+T G KL+EEL+ L V +P ++AA+A+ARE GDL ENAEYH AR++Q F EG Sbjct: 1 MRKLPITREGYCKLQEELEKLVKVVKPSVVAAVAQARELGDLSENAEYHEARKEQSFVEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +I++++ LS A+VIDV++ RV FGA+VT+ N++S Y+IVG+ E+D K+ I Sbjct: 61 KIRELQLCLSEAEVIDVSQFTGE-RVKFGASVTLENMESKSVLIYQIVGNLESDIKEGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV+SPI + ++ KE ++V I P G+ ++++ VE+ Sbjct: 120 SVSSPIGKAVMNKEVGEIVEIDLPSGKKTYKILGVEF 156 >UniRef50_D1B632 Transcription elongation factor n=4 Tax=Synergistaceae RepID=D1B632_THEAS Length = 164 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + MT G EKL++EL L+ R EI + + EAR GDL ENAEYHAA+E+Q E R Sbjct: 9 EQVIMTREGYEKLKQELASLRGDGRSEIASKLEEARAFGDLSENAEYHAAKEEQEKLESR 68 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E +LS A+V++ + + + V GATV + +LD+ TY +VG +EAD K N IS Sbjct: 69 IMWLEYQLSKAKVVESSDI-DTSTVSLGATVQLRDLDTGNTYTYVLVGSEEADPKANRIS 127 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ + +IG+ E + V+++ P G + ++ Sbjct: 128 AQSPVGKAIIGRAEGEEVIVRVPKGTRHLRIERIS 162 >UniRef50_Q2Y7V5 GreA/GreB family elongation factor n=33 Tax=cellular organisms RepID=Q2Y7V5_NITMU Length = 213 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 2/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 +T G ++L +E +L + RP++ A ++ A +GD ENA+Y +++ + R Sbjct: 30 SKNYITPEGHKRLMDEFLWLMNRERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRR 89 Query: 62 IKDIEAKLSNAQVIDVTKMPNN-GRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 I+ + +L A++ID + + R+ FGATVT +N EE+ IVG +E D + I Sbjct: 90 IRFLTRRLDMAEIIDPSMPREDESRIFFGATVTYINEK-GEEKIVSIVGVNEIDTTRGYI 148 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S SP+AR L+ E DVV + PGG E E+++V Y Sbjct: 149 SWVSPLARTLLKAREGDVVTLHAPGGTEELEILEVRY 185 >UniRef50_Q5SKM1 Transcription elongation factor n=5 Tax=Thermus RepID=Q5SKM1_THET8 Length = 155 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 4/157 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G +L+EEL+ LK+V+R EI A +A E GDL+ENA Y AR E R Sbjct: 3 KPVYLTPEGYRRLQEELNHLKTVKRQEISADFEQALEEGDLRENAGYDEARRAMWQNEAR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E LS A +++ +V G V + ++ E + IVG EAD IS Sbjct: 63 IAQLEDLLSRAVIVENGSF---DQVALGCQVELE-TETGERLSLAIVGSHEADIFSGKIS 118 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 SP+ + L+GK+ DVV I+ G + +++++ L Sbjct: 119 DESPLGQALLGKKVGDVVEIRGKKGAQVYTILEIKPL 155 >UniRef50_Q057J4 Transcription elongation factor greA n=20 Tax=Proteobacteria RepID=GREA_BUCCC Length = 159 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 86/157 (54%), Positives = 118/157 (75%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 IPMTLRG KL+ EL LK + RP I+ AIA AR+ GDLKENAEYH+ARE+Q FCE R Sbjct: 3 NKIPMTLRGFNKLKSELKKLKYITRPCIVKAIANARQLGDLKENAEYHSAREEQSFCENR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +IE KL AQ+ID+TK+P G VIFG+TVTVL + + Y IVGDDEA++K+ IS Sbjct: 63 ICEIENKLLRAQIIDITKIPFKGIVIFGSTVTVLQISTSNIFVYTIVGDDEANYKEFSIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 ++SP++R LIGK+++D++ + TP G +++ + K+EY+ Sbjct: 123 IHSPMSRALIGKKKNDIIKVNTPTGYIKYIIKKIEYI 159 >UniRef50_C9KJ19 Transcription elongation factor n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ19_9FIRM Length = 156 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 93/155 (60%), Gaps = 3/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G KL E+L++LKSV+R EI + A GDL EN+EY A+ +Q F EG Sbjct: 4 KQVMLTEEGYNKLVEKLNYLKSVKRIEIAQRLKAAIALGDLSENSEYDDAKNEQAFLEGE 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+D+ AK+ N+ +I V G+ VTV +++ +E+T+ +VG EAD + IS Sbjct: 64 IQDLTAKIRNSHIIKAG---AGDVVQMGSKVTVKDIEFGDEETFMLVGSTEADPDEGKIS 120 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ + L+G++ V+ + P G +++E++ ++ Sbjct: 121 NESPLGQALLGQKSGSVIDVHAPAGIIKYEILDIK 155 >UniRef50_Q0BR49 Transcription elongation factor greB n=4 Tax=cellular organisms RepID=Q0BR49_GRABC Length = 169 Score = 158 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 1/155 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 + MT G ++ EL L RP+I+ ++ A +GD EN +Y +++ + R+ Sbjct: 12 SFYMTPVGHAQMVAELKQLMREERPKIVEIVSWAAGNGDRSENGDYLYGKKRLREIDRRV 71 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + +L NA VID P+ R+ FGATVT +N E IVG DEAD IS+ Sbjct: 72 RFLTKRLENAVVIDPATQPHKDRIYFGATVTYINAAD-ETVQVTIVGADEADMALGRISL 130 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ L+G + D V + TP +++ V+Y Sbjct: 131 LSPVAKALLGASKGDEVTVITPVKTEILDILDVDY 165 >UniRef50_A9WK05 Transcription elongation factor greA n=6 Tax=Chloroflexi (class) RepID=GREA_CHLAA Length = 157 Score = 158 bits (399), Expect = 8e-38, Method: Composition-based stats. Identities = 59/155 (38%), Positives = 91/155 (58%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G +L EL++L +V R +I IA A+E GD+ E+ EY A++ Q EGR Sbjct: 4 KPTYLTREGRARLEAELEYLTTVERKQIAERIAAAKELGDISESGEYEDAKKAQALLEGR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++++ LS A+VID + NG V G++VTV D E+T+ IVG EA+ +Q IS Sbjct: 64 IRELKHLLSRAEVIDEDQAS-NGEVRVGSSVTVRFEDDGTEETWTIVGSAEANPRQGRIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ L+GK + V + TP G ++ ++KV Sbjct: 123 NESPLGAALLGKRARNKVTVHTPSGVMKLTILKVR 157 >UniRef50_Q7VM42 Transcription elongation factor greB n=27 Tax=Proteobacteria RepID=GREB_HAEDU Length = 162 Score = 157 bits (398), Expect = 8e-38, Method: Composition-based stats. Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 ++ +T G + L +EL +L RP++ +++EA GD ENAEY + + + R Sbjct: 3 KSNYITRAGWQALDQELKYLWKEERPKVTQSVSEAAALGDRSENAEYIYGKRRLREIDRR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+ + +L Q+ID G+V FGA + + N + E YRIVG DE D +N IS Sbjct: 63 IRFLSKRLEALQIIDYHPQ-QAGKVFFGAWIELEN-NEGEINQYRIVGCDEFDPTKNWIS 120 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 ++SP+AR LIGK DD + ++TP G+ F + K+ Y Sbjct: 121 IDSPVARALIGKCVDDEIEVQTPTGKAVFYINKIWY 156 >UniRef50_A3ESJ0 Transcription elongation factor n=4 Tax=Bacteria RepID=A3ESJ0_9BACT Length = 160 Score = 157 bits (398), Expect = 8e-38, Method: Composition-based stats. Identities = 79/157 (50%), Positives = 110/157 (70%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +PMT G EKL+EEL+ LK RP+ I IAEAR HGDL ENAEYHAA+E+QGF Sbjct: 1 MNQVPMTKAGYEKLKEELEKLKHEERPKNIQDIAEARAHGDLSENAEYHAAKERQGFINS 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK++EAK+++A V+ + ++ R+ FGATV ++ LDS EE+ Y +VG +EAD K I Sbjct: 61 RIKELEAKIASAIVV-SSAHQDHSRITFGATVRLVPLDSKEEKRYTLVGQEEADLKAGRI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV+SP+ + LIG E + V I+ P GEV++ + ++ Y Sbjct: 120 SVHSPVGKALIGHSEGETVTIRVPAGEVQYTIAEIFY 156 >UniRef50_C1XQ58 Transcription elongation factor n=2 Tax=Meiothermus RepID=C1XQ58_9DEIN Length = 159 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G ++L++EL LK+V+R EI AA +A E GDL+ENA Y AR Q + R Sbjct: 5 KPVYLTAEGLKRLQDELTTLKTVKRQEIAAAFEQAIEEGDLRENAGYDEARRAQWDNDRR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E+ L+ A V++ V G +V + D+ + IVG EAD IS Sbjct: 65 ISELESILARAVVVEAGNGTP-LEVGLGVSVELE-TDTGARMSLTIVGSHEADVFNGKIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+ + L+GK+ D V +P G + ++++ Y Sbjct: 123 NESPMGQRLMGKKVGDRVEYPSPKGVQSYTIVELSY 158 >UniRef50_A5V3E1 Transcription elongation factor greA n=13 Tax=Proteobacteria RepID=GREA_SPHWW Length = 158 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 3/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ +PM G + L EEL LK+ RP II AI EAR HGDL ENAEYHAA+E+QG E Sbjct: 4 IEKLPMLAEGQKMLTEELARLKA-ERPLIIDAIEEARAHGDLSENAEYHAAKERQGQIEA 62 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 I DIE +LS AQVID + + + V FGATVT+L+ D ++ Y+IVG EAD K I Sbjct: 63 SIADIEDRLSRAQVIDPSMLSGDKIV-FGATVTLLD-DDEKPVRYQIVGQTEADAKTGKI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S NSP+ R LIGK+ DD V + P G+ + V K+E++ Sbjct: 121 SYNSPLGRALIGKKVDDEVEVTVPSGDRFYLVSKIEFI 158 >UniRef50_Q8ZJH2 Transcription elongation factor greB n=165 Tax=Proteobacteria RepID=GREB_YERPE Length = 171 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 91/156 (58%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 ++ +T G + L EL +L RP + A++EA GD ENAEY +++ + R Sbjct: 3 KSNYITREGWQALDRELHYLWREERPVVTQAVSEAAAMGDRSENAEYIYGKKRLREIDRR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ + +L +++D G+V FGA V V N +E++ +R+VG DE D + IS Sbjct: 63 VRFLAKRLEVLKIVDP-DPRQEGKVFFGAWVRVENEQ-EEQRIFRLVGPDEFDPAKKWIS 120 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 ++SP+AR LIGK+ DD V ++TP GE + ++++ Y Sbjct: 121 IDSPVARALIGKQVDDEVTVQTPNGEATYWILEIRY 156 >UniRef50_Q67JL1 Transcription elongation factor n=2 Tax=Clostridiales RepID=Q67JL1_SYMTH Length = 157 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 59/155 (38%), Positives = 97/155 (62%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + ++L G ++L +EL +L++V+R E+ I +ARE+GD+ EN+EY A+ +Q F EGR Sbjct: 4 KEVLLSLDGLKQLEQELLYLRTVKRMEVAERIKQAREYGDISENSEYEDAKNEQAFIEGR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E L NA+VID + V+ G+TV + +L+ +E TY IVG EAD N IS Sbjct: 64 ILVLEKMLRNARVIDEP-VGQQEVVVLGSTVVLRDLEYGDEHTYTIVGTTEADPAHNRIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ R ++G+ VV + P G ++E++ ++ Sbjct: 123 NESPVGRAIMGQRVGTVVAVDAPDGVFKYEIVAIK 157 >UniRef50_Q9JVD0 Transcription elongation factor greB n=64 Tax=Bacteria RepID=GREB_NEIMA Length = 163 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 1/156 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G + L++EL L + RPEI+ + A +GD EN +Y + + + RI Sbjct: 6 KNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGDRSENGDYLYGKRRMREIDRRI 65 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + +L A V+D +V FGATV +L D EQT +IVG DE D QN IS Sbjct: 66 RFLTKRLEAAVVVDPELREATDQVFFGATVGLLRGD-GREQTVKIVGIDEIDTAQNKISW 124 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 SP+AR LI E D VV+ TP G E E++ VEY+ Sbjct: 125 ISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI 160 >UniRef50_D2T9B8 Transcription elongation factor greB n=3 Tax=Erwinia RepID=D2T9B8_ERWPY Length = 187 Score = 155 bits (392), Expect = 4e-37, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ +T G L++ELDFL RPE+ + A GD ENA+Y +++ + Sbjct: 29 MKTKLITREGYNLLKQELDFLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 88 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R++ + L +++D + +G+V FGA V V N D + + +RIVG DE + + I Sbjct: 89 RVRYLTKCLEQLRIVDYSPQ-QDGKVFFGAWVEVEN-DDGDIKRFRIVGYDEIFGRNDYI 146 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S++SP+AR L+ KE D + TP GE + + + Y+ Sbjct: 147 SIDSPMARALLKKEVGDAATVFTPAGEALWYINDISYV 184 >UniRef50_B1MX52 Transcription elongation factor greA n=11 Tax=Firmicutes RepID=GREA_LEUCK Length = 160 Score = 155 bits (391), Expect = 5e-37, Method: Composition-based stats. Identities = 63/156 (40%), Positives = 91/156 (58%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMT G +KL+ EL+ L + +RPEI I AR +GDL EN+EY +A+++Q F EGR Sbjct: 5 KVFPMTAEGRDKLQAELEDLITRQRPEITNRIQIARSYGDLSENSEYQSAKDEQAFVEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++ + NA++ID V G TVT L +E +TY IVG E+D IS Sbjct: 65 ILTLKKMIENAEIIDPNA-TAADVVSLGKTVTFKELPDEEPETYAIVGSTESDPLAGKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 S +A L+ K+ D V + P GE ++ E++KVE Sbjct: 124 NESAMAVALLDKKVGDKVSVPLPSGESIDVEILKVE 159 >UniRef50_C9RNS9 GreA/GreB family elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNS9_FIBSS Length = 169 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 1/155 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 ++ G EK + E + LK V RP +I + A GD ENA Y R + + R+ Sbjct: 16 KHLISKEGFEKFKAEWEHLKYVERPAMINQVQAAAAEGDRSENAAYTYGRMRVREIDRRL 75 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 ++++ L AQ+++ +G + FGATV +++ + E+ Y IVGD E D Q IS+ Sbjct: 76 RELDRILDGAQIVENAA-TKDGSIRFGATVKMIDKKTKREKIYSIVGDKEIDPLQGRISM 134 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SPI L GK+ D V ++ P G++ +E+++V Y Sbjct: 135 KSPIGEALQGKKAGDTVEVQAPRGKIVYEILEVNY 169 >UniRef50_A2SJD8 Transcription elongation factor n=50 Tax=Proteobacteria RepID=A2SJD8_METPP Length = 213 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 1/156 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 +T G +LR EL L RP+++ ++ A ++GD EN +Y +++ + R Sbjct: 54 SKNYITPAGFARLRAELMQLLDDERPKVVETVSWAAKNGDRSENGDYLYGKKRLREIDRR 113 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+ + +L A+V D + + +V FGATVT D E+T I G DEAD Q +S Sbjct: 114 IRFLTKRLEIAEVADPSVHRGSDQVFFGATVTYAAPD-GVERTITIKGIDEADNLQAEVS 172 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+AR L+ D V + TP G EVI+V Y Sbjct: 173 WISPVARALLKARVGDEVTLLTPQGPQTIEVIEVRY 208 >UniRef50_D1C6T4 Transcription elongation factor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6T4_SPHTD Length = 157 Score = 153 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 2/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + IP+T G + L++ELD L + RR EI A+ ARE GDL+ENA Y AA+ Q F EGR Sbjct: 4 ERIPITKEGLKALQDELDDLVNRRRVEIAQALQAAREEGDLRENAGYDAAKHDQAFIEGR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++IE L A+VID + V G+TVT+ ++TY IVG EA IS Sbjct: 64 IREIEDILRRAEVIDEAPNGDARVVRLGSTVTIEI--DGAQETYTIVGAVEAKPAAGRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP R L+G E + V I+TP + ++ VE Sbjct: 122 NESPFGRALLGHREGEEVEIQTPAAVLHARIVNVE 156 >UniRef50_Q3Z8E7 Transcription elongation factor greA n=2 Tax=Dehalococcoides RepID=GREA_DEHE1 Length = 156 Score = 153 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 55/157 (35%), Positives = 92/157 (58%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ IPMT G +KL +EL LK V+R ++I + A D++ENA YHAA+EQ+G EG Sbjct: 2 VEKIPMTASGYKKLEDELSTLK-VKRIDVIEEMRLAAMDKDMRENAPYHAAKEQRGQIEG 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RIK+IE +L A V + T N +V G+TV + + + E TY +V E + + I Sbjct: 61 RIKEIEHELKYADVSEYTD-TNTSKVNMGSTVKLRDPKNGECCTYTLVSPKEIEPLKGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S +SPI + + + + + + I+ P G +++ + + + Sbjct: 120 SASSPIGKAVFNRNKGEQIEIEVPSGTLQYIIEDISF 156 >UniRef50_B9KH08 Transcription elongation factor n=9 Tax=Rickettsiales RepID=B9KH08_ANAMF Length = 174 Score = 151 bits (383), Expect = 5e-36, Method: Composition-based stats. Identities = 77/161 (47%), Positives = 113/161 (70%), Gaps = 7/161 (4%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 P+T RG +KL EL+ LKS RP+II +I++ARE GDL ENAEYHAARE+QG E +I Sbjct: 16 RFPITRRGFQKLEAELEALKS-ERPKIIKSISDARELGDLSENAEYHAARERQGLVESKI 74 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTV----LNLDSDEEQTYRIVGDDEADFKQN 118 ++E+K S A+VIDV+++ + V+FGATVTV DS Y+IVG+ EAD +N Sbjct: 75 MELESKRSRAEVIDVSELSGD-TVMFGATVTVSVYDEQTDSTGVMQYQIVGEYEADVSKN 133 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVE-FEVIKVEYL 158 +IS+ SP+ L+G+ E D V +KTP G+ + ++++K+E++ Sbjct: 134 MISIKSPLVLSLLGRREGDSVEVKTPRGDYKIYQIMKIEFV 174 >UniRef50_Q2N9J5 Transcription elongation factor n=2 Tax=Erythrobacter RepID=Q2N9J5_ERYLH Length = 159 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 P+T G L+ D L RPEI+ ++ A +GD EN +Y R++ + + Sbjct: 7 PITPGGYAALKARYDRLLGTERPEIVEIVSWAAGNGDRSENGDYIYGRKRMREIDRELAH 66 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + ++ +A+VI+ ++ P+ R FGAT+T+ + D +T +VGDDE D I +S Sbjct: 67 LARRMKHARVIEPSEQPDKDRAFFGATLTLADEDD-ARKTVTLVGDDEQDASAGKIGWSS 125 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+AR L G D+ + P GE E+EV+ + Y Sbjct: 126 PLARALRGARVGDLRTVHLPSGEREWEVMAIAY 158 >UniRef50_Q3ATA7 Transcription elongation factor greA n=13 Tax=Bacteria RepID=GREA_CHLCH Length = 160 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 67/155 (43%), Positives = 92/155 (59%), Gaps = 2/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T G +L+EEL L R E++ IAEAR HGDL ENAEY AARE+Q E R Sbjct: 3 DRIYLTNDGYNRLKEELYVLVHQTRKEVLEKIAEARAHGDLSENAEYDAAREEQSQIEAR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDS-DEEQTYRIVGDDEADFKQNLI 120 I D+E+KLS A ++D ++ +V +V + NLD+ DE Y +V +EAD I Sbjct: 63 IGDLESKLSAATILDPKQI-KTDKVYILTSVKLRNLDNPDEIIEYTLVSSEEADTDAGKI 121 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SV SP+ R LIGK V I P GE+ +E++++ Sbjct: 122 SVRSPVGRSLIGKTVGAKVTIVVPKGELHYEILEI 156 >UniRef50_A6W1U9 Transcription elongation factor GreB n=17 Tax=Gammaproteobacteria RepID=A6W1U9_MARMS Length = 196 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 58/156 (37%), Positives = 87/156 (55%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 ++ +T GA+ L EL +L +RP + + EA GD ENAEY ++Q + R Sbjct: 38 KSAYITQEGAQALLAELKYLWKEKRPAVTETVREAAAQGDRSENAEYIYGKKQLREIDRR 97 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ +E +L V+D + RV FGA VT+ + + YRIVG DE D + IS Sbjct: 98 VRYLEKRLEVCTVVD-RFPSDQERVFFGAWVTLEDEA-GNLKEYRIVGPDELDHHSSYIS 155 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 ++SP+AR L+ K+E D VVI+ GGE + + VEY Sbjct: 156 IDSPVARALLKKQEGDEVVIRLAGGEKTYIIDAVEY 191 >UniRef50_A7HDS3 Transcription elongation factor GreB n=3 Tax=Myxococcales RepID=A7HDS3_ANADF Length = 169 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G +L E + + SV RP+I+A + A GD ENAEY +++ + R Sbjct: 10 KPRYITPEGFRRLASEHERIWSVDRPKIVAEVEAAAALGDRSENAEYVYGKKKLRELDRR 69 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ + ++ V+D P+ GR FGA VT+ + D E +T+R+VG DE D LIS Sbjct: 70 LRFLSERMDALTVVDPRPHPH-GRAFFGAWVTIED-DEGEARTFRLVGPDEFDVAAGLIS 127 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V +P+ R L+GK+E D V+ P GE E ++ V + Sbjct: 128 VEAPLGRALLGKQEGDTVLFLRPAGEAELTIMAVRW 163 >UniRef50_B9L0L0 Transcription elongation factor greA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=GREA_THERP Length = 156 Score = 150 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 2/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + IP+T G E LR+E ++L RRPEI I EAREHGD++ENA Y AA+ Q F EGR Sbjct: 4 ERIPITREGLEALRQEYEYLVKHRRPEIARVIQEAREHGDIRENAAYDAAKHDQAFIEGR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++IE L ++I+ + V G+TVT+ E +TY IVG EA IS Sbjct: 64 IREIEELLKRVELIEQPTDGDRSVVRVGSTVTIEI--DGEIETYTIVGAIEAKPSAGRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ R L+G ++V I+TP G + +I+V+ Sbjct: 122 NESPVGRALLGHRAGEIVPIETPNGTLMARIIEVQ 156 >UniRef50_C9RKD0 Transcription elongation factor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD0_FIBSS Length = 151 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 3/149 (2%) Query: 7 TLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG-RIKDI 65 T +KL ++L+ LK+V RP ++ + +AR GDL ENAEYHAA+E+ + + + Sbjct: 3 TQEAYDKLVKDLENLKNVERPRVLQELVDARAQGDLSENAEYHAAKERLASIDNIEMPKL 62 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + +L+ AQVI N+ + FGAT+T NL + E Y++V +EAD IS SP Sbjct: 63 QDQLARAQVIAFDA--NSDTIKFGATITAKNLKTKREIVYQLVSPEEADALNGKISFKSP 120 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 I L+GK+ D V + TP G+ +FE+I Sbjct: 121 IGAALMGKKRGDTVEVVTPKGKNQFEIID 149 >UniRef50_Q88KH5 Transcription elongation factor greB n=84 Tax=Gammaproteobacteria RepID=GREB_PSEPK Length = 162 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 59/157 (37%), Positives = 87/157 (55%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +T G E L++ELD L V RPEI +A A GD ENA+Y ++ + Sbjct: 1 MSTNIITTEGHEALKKELDHLWRVYRPEITQKVAWAASLGDRSENADYQYNKKLLREIDR 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R++ + +L + +V+ + G+V FGA V + N D E +RIVG DE + + I Sbjct: 61 RVRYLRKRLEDVKVVAYS-PEQEGKVFFGAWVEIEN-DEGETMKFRIVGYDEIYGRNDYI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+AR L+ KEE D VV+ TP GE + V + Y Sbjct: 119 SIDSPMARALLKKEEGDEVVVHTPTGEATWYVSSIRY 155 >UniRef50_D2RL35 GreA/GreB family elongation factor n=3 Tax=Veillonellaceae RepID=D2RL35_ACIFE Length = 172 Score = 148 bits (373), Expect = 6e-35, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 93/157 (59%), Gaps = 3/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G +KL +ELD+L+S +R ++ + A +GD+ EN+EY A+ +Q F EGR Sbjct: 3 EQTILTEEGLKKLEDELDYLRSEKRQQVAERLKVAISYGDISENSEYDDAKNEQAFVEGR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--L 119 I +E + NAQ+I T + N V G V + ++++ +++ Y +VG EAD Sbjct: 63 ILTLENMIRNAQIIKDTDITKN-VVSLGCKVKIEDMETHDQEEYTVVGTTEADPMAEPPR 121 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IS SP+ + ++G++ VV + TP GE++++++ V Sbjct: 122 ISNESPVGKAILGQKVGAVVKVTTPIGELDYKIVAVS 158 >UniRef50_D1PEW3 Transcription elongation factor n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEW3_9BACT Length = 154 Score = 148 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 3/156 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ M+ G ++L EL + +V P + AIAEAR+ GDL EN EYHAA+ +QG Sbjct: 1 ME--YMSQEGYDELVAELQHMVNVELPAVRDAIAEARDKGDLSENFEYHAAKREQGKLLS 58 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI + L NA+VID +++ + V + + + NL + Y IV EAD I Sbjct: 59 RISFKQKVLENARVIDKSRL-KSDTVGLLSKIKITNLANKCSMNYTIVNPHEADLHSGKI 117 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 S+ SPIA+ L+GK+ + V++K P G ++F + VE Sbjct: 118 SIKSPIAKALLGKKAGEEVMVKVPAGLLKFRLDSVE 153 >UniRef50_UPI0001C3129D transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3129D Length = 161 Score = 148 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 2/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G KL+ EL+ L + +R E+ A I EARE GD+ ENAEY A+ +Q E + Sbjct: 3 KDVILTPDGLAKLKSELEHLSTEKRREVAARIKEAREFGDISENAEYDDAKNEQAMLESK 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E KL A VID + V G++V V + S + TY IVG EA+ + +S Sbjct: 63 IAQLEEKLRAATVIDSRSV-GTDVVGIGSSVQVADSQSGKSDTYVIVGSAEANPAERKLS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKV 155 SP+ + LIG++ + ++ P G+ E + K+ Sbjct: 122 NESPVGKALIGRKAGETATVQLPNGKQRELRITKI 156 >UniRef50_Q8P7P8 Transcription elongation factor greB n=53 Tax=Proteobacteria RepID=GREB_XANCP Length = 168 Score = 147 bits (372), Expect = 9e-35, Method: Composition-based stats. Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 1/152 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G +L+ ELD L +RRPE++ A+A A GD ENAEY ++Q G + R++ + Sbjct: 15 ITPEGHARLKAELDELWRLRRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYL 74 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L +V+D T + V FGA V + + DS E YRIVG DE D + IS++SP Sbjct: 75 SKRLEALRVVD-TAPTDPQAVFFGAQVELEDADSGELLRYRIVGPDETDAGRGWISIDSP 133 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR L+ K DD + P G+ F V+ VEY Sbjct: 134 LARALLKKRVDDEFEAQLPSGKHTFVVVVVEY 165 >UniRef50_Q9HZY5 Transcription elongation factor greB n=13 Tax=Gammaproteobacteria RepID=GREB_PSEAE Length = 168 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 2/152 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T GA +LR EL L VRRP++ A++EA GD ENAEY ++ + R++ + Sbjct: 15 ITPEGAARLRAELHELWHVRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRVRFL 74 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +L N +V+ + + RV FGA VT+ + D E+ YRIVG DE D + N IS++SP Sbjct: 75 RKRLENLKVVGE-RPADPNRVYFGAWVTLEDED-GEQARYRIVGPDELDLRNNQISIDSP 132 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +AR L+GKE D V+++TP GE + V+++EY Sbjct: 133 LARALVGKELDAEVLVRTPAGEKLWFVVEIEY 164 >UniRef50_Q1PYP5 Transcription elongation factor n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYP5_9BACT Length = 741 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T G EK ++ELD + +++ E + EA GDL+ENAEY AARE+Q + Sbjct: 585 NKIYVTKHGYEKQKKELDNIMNIQFAENARDLGEAISRGDLRENAEYQAAREKQAQLIEK 644 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + ++A L I+ + V G VT+ N D + +TY ++G +AD +N+IS Sbjct: 645 AERLKADLQKIVFIEPYTV-KTNIVSPGTKVTIKNKDKETTETYTLLGPWDADIDKNIIS 703 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPI +GL+ K+ + V I+ P E+ ++IK+E Sbjct: 704 YLSPIGKGLLNKKTGETVTIQLPENEIVCDIIKIE 738 >UniRef50_C7GYY1 Transcription elongation factor n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYY1_9FIRM Length = 158 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T +G E+ ++E D L VRR E+ I EA +GDL EN+EY AA+ +Q E R Sbjct: 3 ETVFLTQKGLEEKQKEYDELVGVRRKEVADRIKEATAYGDLSENSEYDAAKNEQAELEER 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E L+N ++ID + V G V + N+ +E+TYRIVG EAD NLIS Sbjct: 63 ISVLEDMLNNYEIID-SNAAKGDVVDLGLNVHLKNITKKKEETYRIVGSAEADPFNNLIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 SPI +GL+ + + V I P G V+++++K+ Sbjct: 122 NESPIGKGLLKHKVGETVSIDIPSGKTVKYKILKIS 157 >UniRef50_C5BN87 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=C5BN87_TERTT Length = 172 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 50/157 (31%), Positives = 86/157 (54%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M +T G KL+ ELD+L RPE+ + A GD ENA+Y +++ + Sbjct: 17 MSTPLITEEGLTKLKSELDYLWRTERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 76 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R++ + ++ + +V+ K G V FG+ V + N E + RIVG DE ++N I Sbjct: 77 RVRYLRKRIDSLKVVRYAK-EQEGSVYFGSWVKIENEA-GENKELRIVGYDEIFGEKNYI 134 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+A+ L+ K+ D ++KT GE +E++++ Y Sbjct: 135 SIDSPMAKALLRKKVGDEAIVKTEVGEFCWEIMEISY 171 >UniRef50_A6H247 Transcription elongation factor greA n=33 Tax=Bacteroidetes RepID=GREA_FLAPJ Length = 158 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 63/151 (41%), Positives = 97/151 (64%), Gaps = 1/151 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 T G +KL++EL+ LK++ RP+ A IAEAR+ GDL ENAEY AA+E QG E +IK Sbjct: 6 YYTAEGLKKLKDELEQLKAIERPKASADIAEARDKGDLSENAEYDAAKEAQGLLELKIKK 65 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +E SNA++ID +++ + ++ + V + N + E +Y +V + EAD K ISV S Sbjct: 66 MEEVYSNARLIDESQLDVSKALVL-SHVKIKNQSNGMEMSYHLVAESEADLKTGKISVTS 124 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 PI +GL+GK ++ I P G ++FEV+++ Sbjct: 125 PIGKGLLGKSVGEIAEITVPNGILKFEVLEI 155 >UniRef50_C4Z9L9 Transcription elongation factor n=3 Tax=Firmicutes RepID=C4Z9L9_EUBR3 Length = 185 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 61/155 (39%), Positives = 98/155 (63%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G +KL +EL+ LK V+R E+ I EARE GDL ENAEY AA+++Q E R Sbjct: 27 KKNILTYAGLKKLEDELEQLKVVKRKEVSQKIKEAREQGDLSENAEYDAAKDEQRDIEAR 86 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++IE L NA+V V + + ++ G + +L+ + DEE Y+IVG EA+ + IS Sbjct: 87 IEEIEKILKNAEV-VVEEEVDLDKISIGCKIRILDCEFDEELEYKIVGSTEANSLKGKIS 145 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ + L+GK+ D V ++T GE+ ++V++++ Sbjct: 146 NESPVGKALLGKKVGDTVTVETQVGELTYKVLEIQ 180 >UniRef50_C4XLU8 Transcription elongation factor greA n=11 Tax=Desulfovibrionales RepID=GREA_DESMR Length = 164 Score = 145 bits (367), Expect = 3e-34, Method: Composition-based stats. Identities = 61/157 (38%), Positives = 98/157 (62%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M++IP+++ G + E RP +I AI EARE GDL+ENA Y AARE+QG E Sbjct: 1 MESIPISVEGFRR-LERELERLKKERPGVILAIKEAREEGDLRENAGYEAARERQGMLEA 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI IE+++S VID+ + +VIFGATV + ++D+ + + Y ++G DEA+ + I Sbjct: 60 RINYIESRMSRFNVIDLATLGGE-QVIFGATVEIEDVDTGDVKKYTLLGPDEAEPSKGSI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S+ SP+ L+GK D +V+ P G++ +E++ + + Sbjct: 119 SLLSPVGLALLGKFVGDEIVVDAPRGKINYEIVSIAF 155 >UniRef50_Q2G8D8 GreA/GreB family elongation factor n=4 Tax=cellular organisms RepID=Q2G8D8_NOVAD Length = 182 Score = 145 bits (367), Expect = 3e-34, Method: Composition-based stats. Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 3/159 (1%) Query: 1 MQA--IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFC 58 M+ P+T G LR D L RP I+ ++ A +GD EN +Y R++ Sbjct: 22 MKPDGHPITPAGFAALRARYDHLLGTERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREI 81 Query: 59 EGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN 118 + + + ++ ++V+D + + RV+FGATV + + D + + +VGDDE D + Sbjct: 82 DRELAFLARRMKASRVVDPARQEDRSRVLFGATVEIADEDDNR-KVLTLVGDDEQDASKG 140 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 LI ++PIA+ L G D+ +++ P G+ E+E++ + Y Sbjct: 141 LIGWSAPIAKALRGSRVGDLRIVRLPSGQKEWEIMAISY 179 >UniRef50_Q096W9 Transcription elongation factor GreB n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q096W9_STIAU Length = 144 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Query: 14 LREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 73 + EL L +V RP++ A ++ A GD ENAEY +++ + RI+ ++ +L A Sbjct: 1 MHRELLRLLNVERPKVTAEVSAAAAQGDRSENAEYIYGKKRLREIDRRIRFLQKRLDTAT 60 Query: 74 VIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGK 133 ++ + + GRV FGATVT+ + D + TY+IVG DE D + ISV SPI + L+ K Sbjct: 61 IVTPAEQTDQGRVYFGATVTLEDED-GVQTTYQIVGSDEIDTQGGRISVESPIGKALLRK 119 Query: 134 EEDDVVVIKTPGGEVEFEVIKVEYL 158 D V + P GE+E ++ + Y+ Sbjct: 120 AVGDSVEVMRPRGEIELTIVAIAYM 144 >UniRef50_A8SDG2 Transcription elongation factor n=2 Tax=Clostridiales RepID=A8SDG2_9FIRM Length = 161 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 2/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q I M+ G + ++EEL++LK+VRR E+ I EAR HGDL EN+EY A+ QG E R Sbjct: 3 QEIKMSAAGLKAMQEELEYLKTVRRKELAEEIKEARSHGDLSENSEYDEAKNTQGLVENR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E + NA +ID +++ + V G VT+ DE + Y IVG EAD IS Sbjct: 63 ITELEQTIKNAVIIDESELSVDN-VSVGTHVTIRETGEDEAEEYDIVGRTEADAFNGKIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 SP+ L+GK D + P G V + V+ + + Sbjct: 122 DESPVGHALMGKAVGDKAEVLLPTGQTVVYTVLAITH 158 >UniRef50_C1ZBG3 Transcription elongation factor n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZBG3_PLALI Length = 160 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 65/160 (40%), Positives = 97/160 (60%), Gaps = 3/160 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ P++ G +KL+EE+ L+ P+I AIAEAR GDLKENAEYH RE+QG + Sbjct: 1 MELQPISREGYDKLKEEIRKLEHDDMPKIAEAIAEARAEGDLKENAEYHGQREEQGRLQA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADF--KQN 118 RI +++KL++ ++D + +P G V FG VTV N D + + Y VG E D+ Sbjct: 61 RINSLKSKLASCYIVDKSTLPK-GVVAFGTRVTVKNTDDGDIEKYEFVGPGEEDYMSDVM 119 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 I SP+A L+GK+ +D V I+ P G + +E+ ++E L Sbjct: 120 KILTTSPLASALLGKKVNDKVSIQVPRGTINYEITEIEEL 159 >UniRef50_UPI0001C37CEA transcription elongation factor GreA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CEA Length = 156 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 87/156 (55%), Gaps = 1/156 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M M+ +KL EL+ L +R E+ + AR +GDL ENAEY A+ +Q E Sbjct: 1 MAVKQMSRESYDKLVAELNDLIINKRKEVAERLKVARSYGDLSENAEYDEAKNEQAILEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 I +++ + NA+++D + + + + + +T+ LD+ + +T+ IV + A+ ++ I Sbjct: 61 HIAELQYTIDNAEIVDDSNISVD-EIGMSSKITIKRLDTGKIETFTIVSTNHANVREGKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 S SPI + + K DV ++ P GE++FEV+++ Sbjct: 120 SDASPIGKAAMKKRVGDVFIVDAPAGELKFEVVEIS 155 >UniRef50_P47524 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCGE Length = 161 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 1/157 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 + +T G ++L +EL+ L V+RPEII + EAR+ GDL ENA+Y AA+ QQG E Sbjct: 3 LNKNYLTQEGFKQLEKELENLIQVKRPEIIRLLQEARDQGDLSENADYDAAKAQQGEIET 62 Query: 61 RIKDIEAKLSNAQVI-DVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 RI +I+ L+NA++I D +V G+TV + + S + Y IVG EA+ +++ Sbjct: 63 RIAEIQDILANAKLISDHQAKTKVTKVSLGSTVEIYDYSSKSNEKYTIVGTLEANPEEHK 122 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IS SP+A + G+ D + +++K+ Sbjct: 123 ISNESPLALAIYGRLIGDECDVVGIEVPYRVKILKIS 159 >UniRef50_Q30T56 Transcription elongation factor n=3 Tax=Campylobacterales RepID=Q30T56_SULDN Length = 174 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 94/157 (59%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 MQ PM++ G + L EE FL V +P+ A GD ENA+Y AA+E+ + Sbjct: 1 MQE-PMSIEGYDVLIEEFKFLLEVEKPKTAQEKLVAAALGDRSENADYQAAKEKLRHIDK 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R+ + A + A +ID + + + +V FG++V +L+L+SD+E+ Y I G E++ + LI Sbjct: 60 RLFYLNAMIQKAHIIDPSTLLHT-KVSFGSSVRILDLESDKEEVYTICGVLESEPENGLI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S++SP+A+ ++GK D I+ P + E+E++++ Y Sbjct: 119 SIHSPLAQVMLGKRVSDEFKIQLPLMKKEYEILEIYY 155 >UniRef50_B3PM73 Transcription elongation factor greA n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=GREA_MYCA5 Length = 159 Score = 144 bits (363), Expect = 9e-34, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 1/154 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T ++ +E L +L+ V RP++I I EAR GDL ENAEY AAR++Q E Sbjct: 6 EKIYLTADSFKQYQERLQYLQEVLRPQVIEEIKEARNQGDLSENAEYDAARDKQATIENE 65 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +I+ L N ++I V G+ V+V++L D ++IVG + D IS Sbjct: 66 ITEIQHILDNYEIIKTQTNRQVSVVRIGSNVSVVSLKDDTVINFQIVGALDTDPFNGKIS 125 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+A+ +IG++ +VV ++ P + + +++ V Sbjct: 126 NTSPLAKAVIGRKAGEVVEVEAPN-KYQVKIVHV 158 >UniRef50_B1H062 Transcription elongation factor n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H062_UNCTG Length = 158 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 58/156 (37%), Positives = 96/156 (61%), Gaps = 3/156 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M I +T G +KL +EL+ L+ + P I IA AREHGDL+ENAEY AA+E Sbjct: 1 MSEIYLTREGRKKLIKELNELQKRK-PLIQDEIASAREHGDLRENAEYCAAKETLANLIR 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI ++ +K++ A++I+ + ++ +V G TVT+ + + + Y IV +EAD N I Sbjct: 60 RIMELTSKIACAKIIEEQNI-DSDKVFIGVTVTIKD-EYGADYQYAIVDLEEADPVANRI 117 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 S+ SP+A+GL+G + V ++ P G+ +F+++K+ Sbjct: 118 SIQSPLAQGLLGHTAGETVAVELPAGKTKFKILKIS 153 >UniRef50_B5ZLJ0 Transcription elongation factor GreB n=5 Tax=Proteobacteria RepID=B5ZLJ0_GLUDA Length = 180 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 1/153 (0%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T G +R EL+ L RP I+ ++ A +GD EN +Y +++ + R++ Sbjct: 22 YVTPAGMAAMRGELNALLRDERPRIVDIVSWAAGNGDRSENGDYLYGKKRLREIDRRVRF 81 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + ++ A V+D RV FGATVT + + D E+T IVG DE+D +S+ S Sbjct: 82 LTRRIEKAIVVDPAAQTRRDRVFFGATVTYV-TEDDTERTVVIVGVDESDLAAGQVSLAS 140 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+AR L+G D V + TP G E++++ Y Sbjct: 141 PVARALLGGRVGDEVRLLTPAGAEMIEILRIAY 173 >UniRef50_B7CAB2 Transcription elongation factor n=5 Tax=Erysipelotrichaceae RepID=B7CAB2_9FIRM Length = 162 Score = 143 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 4/159 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G L E + L R E+I + EAR GDL ENA+Y AARE Q EGR Sbjct: 4 EKFYVTQEGYNDLVNEHENLVHKVRQEVIVELQEARAQGDLSENADYDAAREHQAQVEGR 63 Query: 62 IKDIEAKLSNAQVI----DVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 I+++EA + NA++I DV V G+TV +L+L ++E T+ IVG EAD Sbjct: 64 IRELEAMIKNAEIITESADVEDKKKKNVVKLGSTVKILDLSDNQEVTFNIVGTIEADPFN 123 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +S +P+A ++ + DV +K + ++++++ Sbjct: 124 GKLSNTTPLAEVIMDHKVGDVCTVKRVEEPYDVKILEIK 162 >UniRef50_Q1J0L4 Transcription elongation factor n=3 Tax=Deinococcus RepID=Q1J0L4_DEIGD Length = 156 Score = 143 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 61/155 (39%), Positives = 87/155 (56%), Gaps = 4/155 (2%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 IPMT RG +KLRE L++LK+ RR +I + A GDL+E+A Y AR QQ E RI Sbjct: 5 RIPMTKRGYDKLRETLEYLKTTRREQISEYMGSAIADGDLRESAAYDEARMQQSENEARI 64 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 ++E +L AQ+I+ +G GA V V + E+ + +VG E D + IS Sbjct: 65 LELEDQLERAQIIEED---ASGGAGLGAKVKVRDEK-GNERQFELVGTYEVDVLKGKISD 120 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SPI + L GK +V ++ P G +FEV++V Y Sbjct: 121 ASPIGQALSGKRPGQIVTVQLPKGSAKFEVLEVTY 155 >UniRef50_Q2SSM5 Transcription elongation factor greA n=6 Tax=Mollicutes RepID=GREA_MYCCT Length = 157 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 61/155 (39%), Positives = 90/155 (58%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T G E+L+ EL L V RP++I + EAR GDL ENA+Y AAR +Q E R Sbjct: 3 KEIILTQEGLEELKAELKNLLEVTRPKVIEELVEARNQGDLSENADYDAARNRQAEVEAR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 IK++E ++ A+VID +K + G V G+TV L+ + + +IVG EAD LIS Sbjct: 63 IKEVETLINRAKVIDNSKTHSTGEVKIGSTVEFLSSLDHKTKEIKIVGAIEADPFSRLIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPIA+ ++GK+ D V IK + + ++ Sbjct: 123 NESPIAKAILGKKIGDTVEIKDILKPYKITIKSIK 157 >UniRef50_B0P8A6 Transcription elongation factor n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8A6_9FIRM Length = 151 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 1/150 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 MT G + L++EL+ LKSV R EI I AR GDL EN+EY A+ +Q E RIK + Sbjct: 1 MTQEGYDALKKELNELKSVTRGEISEKIRVARGFGDLSENSEYDEAKNEQAVVEARIKKL 60 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E +L + ++I+ ++ V G+ V +L++D DEE Y I E+ IS SP Sbjct: 61 EDQLKHVKIIERDQIS-TDVVSVGSRVKILDMDYDEEMVYTIASSVESHNDLESISDESP 119 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 + +GLIG + DVV I P ++ +++++ Sbjct: 120 VGKGLIGHKVGDVVEIHAPAAVLKLKILEI 149 >UniRef50_Q98Q16 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCPU Length = 157 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 62/154 (40%), Positives = 91/154 (59%), Gaps = 4/154 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T +K EE L +V RP +I I EAR+ GDL ENAEY AARE+QG E R Sbjct: 5 NKIYLTQETIKKYEEEKWHLINVERPAVILEIKEARQQGDLSENAEYDAAREKQGQIEDR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E LSNA I + ++ ++ G+ V +LN + +E+T++IVG + D QN IS Sbjct: 65 ITELENILSNAISI---QESHSDKIGLGSVVRILNQSTGKERTFKIVGSFDTDPTQNKIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+A+ +IG + DVV I P + +++ V Sbjct: 122 YESPLAKSIIGFSKGDVVEIDAPD-KYTTKILSV 154 >UniRef50_D0J9T5 Transcription elongation factor n=55 Tax=Bacteria RepID=D0J9T5_BLASP Length = 162 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 64/161 (39%), Positives = 101/161 (62%), Gaps = 5/161 (3%) Query: 1 MQAI---PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGF 57 M+ +T G +KL++E++ L+++ RP+I IAEAR+ GDL ENAEY A +E Q F Sbjct: 1 MEKEKFEYITKEGLKKLQQEIERLENIERPKISMQIAEARDKGDLSENAEYDAIKEAQEF 60 Query: 58 CEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 E I ++ KLSNA++ID +++ RV +TV V NL EQ Y +V + EAD K Sbjct: 61 LEMNIAKLKKKLSNARIIDGSQINRT-RVSILSTVRVKNLTYGGEQIYTLVPEGEADLKS 119 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVEY 157 IS+N+PI+ GL+GK+ + IK P + ++E++++ + Sbjct: 120 GKISINTPISTGLLGKQVGQIAHIKLPNKMILDYEILEIAF 160 >UniRef50_A6NZ08 Transcription elongation factor n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ08_9BACE Length = 157 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 90/155 (58%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + ++ ++L++EL +LK+VR E+ I EAR GDL EN+EY A+ +QG R Sbjct: 3 KEFKLSPERWKELKDELVYLKTVREKEVADQIKEARSFGDLSENSEYDEAKNEQGKLYSR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E L N VI+ ++ + V G+ + VL+++ +EE Y +VG EAD IS Sbjct: 63 IAEVENILENCVVIEE-EIHDGKTVRLGSKLKVLDVEFNEELDYEVVGSQEADPMNGRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +SP R L+GK + VV++ P G + ++V+ + Sbjct: 122 EDSPFGRALLGKSVGEDVVVEAPAGALHYKVLSIS 156 >UniRef50_A5VME9 Transcription elongation factor GreA n=49 Tax=Lactobacillaceae RepID=A5VME9_LACRD Length = 165 Score = 141 bits (355), Expect = 8e-33, Method: Composition-based stats. Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 7/159 (4%) Query: 1 MQAIP---MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGF 57 M+ + MT G ++ E++ L+ +RP I + AR GDL EN EY A+ + Sbjct: 10 MKNVYFQKMTANGYHEIEEQIAKLQQ-QRPAKIEQLKAARALGDLSENTEYSTAKRELRH 68 Query: 58 CEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 E R++ + +L A+++ + + G TVT+ D E++TY IVG EAD + Sbjct: 69 LESRLRYLNKQLQYAEIVTPKN---DHTIDLGTTVTIEFEDDHEQETYHIVGKQEADLAK 125 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IS +SP+ + ++ + V ++ P + +++KVE Sbjct: 126 QKISFDSPLGQAILHQTAGTTVTVEAPQSSYKVKIVKVE 164 >UniRef50_O51157 Transcription elongation factor greA n=23 Tax=Borrelia RepID=GREA_BORBU Length = 901 Score = 141 bits (355), Expect = 8e-33, Method: Composition-based stats. Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Query: 1 MQAIPMT-LRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCE 59 M+ +T L K ++EL +LK V PE I +ARE GDLKENAEYH+A+E+Q F Sbjct: 741 MEIGFLTILSSLNKKQKELKYLKEVEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLT 800 Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 R+ + ++ NA+VID + + V FG V +LN + ++++Y I+G E++ + + Sbjct: 801 KRLNSLMLEIENAKVIDTKDL-QSSVVGFGTKVVILNEVTGKDESYLILGPWESNPDEGI 859 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 IS SP L+ E D + ++ V K+E + Sbjct: 860 ISYKSPFGENLLDSREGDSLNFVINNTNFKYFVKKIEPI 898 >UniRef50_Q0B0N4 Transcription elongation factor greA n=6 Tax=Clostridia RepID=GREA_SYNWW Length = 159 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 88/155 (56%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G EKL EL+ LKSV+R E+ I +A GD+ EN+EY A+ +Q F EGR Sbjct: 5 KEVVLTKEGLEKLENELEHLKSVKREEVAERIKQAIAFGDITENSEYEDAKNEQAFIEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E L A++++ + V G+ +T+ + S E T +V E+ K IS Sbjct: 65 IISLEKTLKKARLMEDEDI-RTDVVSLGSRITLKEMKSGREVTVTLVSSVESKLKDGKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ + ++GK+ V ++ P G +++++IKVE Sbjct: 124 DESPVGKAIMGKKVKSTVSVEAPAGTIKYKIIKVE 158 >UniRef50_UPI00017427C8 transcription elongation factor GreA n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427C8 Length = 151 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 66/157 (42%), Positives = 96/157 (61%), Gaps = 7/157 (4%) Query: 1 MQAIP-MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCE 59 M + +T G +L++EL+ LK RR EI IAEAR++GDL ENAEY AARE+QG E Sbjct: 1 MNKVYQITEAGKNELKDELETLKG-RRGEIAEKIAEARDYGDLSENAEYDAAREEQGIVE 59 Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 RI +IE L NA +I +G+V G+ V + + + Y +VG EAD + Sbjct: 60 TRIAEIENILQNAAII---TGGVSGQVGLGSVVEL--MTGSKTAVYTVVGPVEADPLEGK 114 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +S SPI L+GK+ DD+V I TP G++E+++I ++ Sbjct: 115 VSNESPIGAALMGKKVDDIVEINTPKGKLEYKIISIK 151 >UniRef50_A0LES5 GreA/GreB family elongation factor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LES5_SYNFM Length = 155 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 51/153 (33%), Positives = 89/153 (58%), Gaps = 1/153 (0%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +P+T G +L EL FL+ V RPE+I + EAR G EN +Y ARE+ + +I Sbjct: 2 KVPITRLGYHRLLRELFFLRHVVRPEVIEELQEARTGGIKIENQQYMLARERHMVLQKKI 61 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 +D+E KL++ +++ K + FG V + N+++ E Q Y++VG E++ +S+ Sbjct: 62 QDLERKLASCEIVVGRKFFF-KQAEFGTIVVIQNIETGETQRYQLVGPYESNVVDGKLSI 120 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +SP+ R L+G+ E + V++ TP G + V+ + Sbjct: 121 DSPVGRHLVGRREGEEVLVYTPAGVRMYRVVSI 153 >UniRef50_Q88ZS9 Transcription elongation factor greA 1 n=7 Tax=Lactobacillus RepID=GREA1_LACPL Length = 156 Score = 140 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 6/158 (3%) Query: 1 MQAIP--MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFC 58 M+ MT G + +E++ LK +RPE I +A A GD ENAEY +A+ G Sbjct: 1 MEPTFNKMTAAGYHAIEQEIEDLKQ-QRPERIRILAAAAALGDRSENAEYSSAKRDLGRL 59 Query: 59 EGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN 118 E R++ + +L AQ++ N ++ G VT+ LD ++ TY++VG EA+ +Q Sbjct: 60 ESRLRYLNKQLQYAQIVQPAD---NDQLDIGKFVTIEFLDDHDQITYQLVGKQEANLEQQ 116 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IS SPI + L DDVV + P G + +VI V+ Sbjct: 117 KISFTSPIGQALANHTVDDVVTVNAPNGAYQVKVIAVK 154 >UniRef50_D0WJ76 Transcription elongation factor n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJ76_9ACTN Length = 161 Score = 140 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 5/157 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T G +KL EEL FL++ +R E+ I ARE GD+ EN+EY A+ +QG E R Sbjct: 9 NEIVLTPEGKQKLEEELHFLETEKRAEVGERIRVAREFGDISENSEYDDAKNEQGLMEAR 68 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I I LSNA +++ K + RV G+TVTV E+ + IVG EAD IS Sbjct: 69 IAQINDILSNAVLVEAPK--RSNRVNIGSTVTV--DMGGRERVFTIVGAAEADVSSGKIS 124 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 SP+ L+G ++ D + P G +E +++K+E+ Sbjct: 125 NESPVGAALLGGKKGDHFTAEGPTGRVIEMDIVKIEH 161 >UniRef50_B1XUH7 Transcription elongation factor GreB n=2 Tax=Polynucleobacter necessarius RepID=B1XUH7_POLNS Length = 168 Score = 139 bits (351), Expect = 2e-32, Method: Composition-based stats. Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 7/164 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +TL G E+++ EL L ++ R E++ + A +GD EN +Y +++ + R Sbjct: 3 EKNYITLAGYERIKTELLQLLNLDRLEVVKVVHWAASNGDRSENGDYIYGKKRLREIDRR 62 Query: 62 IKDIEAKLSNAQVIDVTKMP----NNGRVIFGATVT---VLNLDSDEEQTYRIVGDDEAD 114 I+ + +L A V+D + + +V FGA+VT + ++ + + IVG DE D Sbjct: 63 IRFLNKRLEFAIVVDNSARKSGENDADQVFFGASVTYSALEGPEAGKRTSITIVGVDEVD 122 Query: 115 FKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 ++ +S SPIA+ LI D V I+TP G E E++ V+YL Sbjct: 123 LDKSHVSWVSPIAKALIKSRIGDCVFIQTPTGPTEIEILDVQYL 166 >UniRef50_Q1QUF3 GreA/GreB family elongation factor n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUF3_CHRSD Length = 178 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 2/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 ++ +T RG +L+ + L V+RP + + EA GD ENA+Y +++ R Sbjct: 21 KSSLITARGYARLKGIHEHLSRVKRPALSTKVGEAAALGDRSENADYTYNKKELNRVIAR 80 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+ + +L QV+D + RV FGA VT+ + D EE T RIVG DE D + IS Sbjct: 81 IRYLGKRLDELQVVD-RLPADTSRVYFGAYVTLED-DDGEEMTIRIVGHDETDTDKRWIS 138 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V++P+A+ ++GK D+ V + PGG+ + + + Y Sbjct: 139 VDAPLAQAMLGKGLDEDVTVNAPGGDTTYIITDIAY 174 >UniRef50_D2PP26 Transcription elongation factor GreA n=3 Tax=Actinomycetales RepID=D2PP26_9ACTO Length = 169 Score = 138 bits (349), Expect = 4e-32, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 7/161 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G ++L+ EL+ LK R EI I+EAR+ GDLKEN YHAA+++QG E R Sbjct: 8 SVVWLTQDGYDQLKSELEHLKGPARAEITQRISEARDEGDLKENGGYHAAKDEQGKIEAR 67 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDD----EADFKQ 117 I+ +E L A+V + ++G V G V++ D+ +T+ + + + Sbjct: 68 IRQLEDMLRRARVGE--TPKDDGVVEPGMKVSITFAGDDDVETFLLGSRELLALDTSVDI 125 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 ++ S SP+ ++GK++ D + P G+ V E++ E Sbjct: 126 DVYSPQSPLGAAIMGKKKGDKATYEAPNGKDVTVEIVAAEP 166 >UniRef50_Q01RT9 GreA/GreB family elongation factor n=2 Tax=Acidobacteria RepID=Q01RT9_SOLUE Length = 164 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 60/143 (41%), Positives = 92/143 (64%), Gaps = 1/143 (0%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 +KL++E+ L+ ++ I +AR HGDLKENAEYHAA+++QGF R+ ++++L Sbjct: 6 KKLQDEITALEYELHVDLPKEILKARLHGDLKENAEYHAAKDRQGFVSARLGQLKSRLGQ 65 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI 131 +ID TK+P + + G+TV VL++ SD+E TY +V +EAD +S SPI R L+ Sbjct: 66 LAMIDFTKIPRD-KAGLGSTVVVLDVKSDQEITYHLVTSEEADAPNGKVSTTSPIGRALL 124 Query: 132 GKEEDDVVVIKTPGGEVEFEVIK 154 GK D V + +PGG E E++K Sbjct: 125 GKTVGDEVKVMSPGGVKELEILK 147 >UniRef50_Q12SN9 Transcription elongation factor GreB n=17 Tax=Bacteria RepID=Q12SN9_SHEDO Length = 166 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 3/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 ++ +T G KL EL++L RPEI +A A GD ENA+Y + +G Sbjct: 7 VKTNLITAEGLAKLTHELNYLWREYRPEITKKVAWAASLGDRSENADYKENKRLLRQIDG 66 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFK-QNL 119 R++ + ++ +V+ G+V FGA V + N D ++ +RIVG DE + Sbjct: 67 RVRFLRKRIEALKVV-PYAAEQEGKVFFGAWVEIEN-DEGVKKRFRIVGPDEIYGDAKGY 124 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 IS++SP+AR L+ KE DD + TP GE + + K+ Y Sbjct: 125 ISIDSPMARALLKKEVDDDASVLTPTGEQFWYINKIFY 162 >UniRef50_B9KZF4 Transcription elongation factor greA n=2 Tax=Thermomicrobia (class) RepID=B9KZF4_THERP Length = 156 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 85/155 (54%), Gaps = 3/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T G L +EL+ L+ + P ++ + + GD+ +N+EY +E+ E R Sbjct: 5 RPIVLTPEGKAALEQELEHLRQHKLPLLLERLQQLSNEGDISDNSEYEDTKEELVLTEAR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I++IE L AQ+I T+ V G+ VTV++ + +T+ IV +EA+ Q IS Sbjct: 65 IREIEHILRRAQMI--TRAGPQDEVRLGSRVTVIDEE-GSVETWVIVSPEEANAAQGRIS 121 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + SP+ L+GK V ++ PGGE+ F + ++E Sbjct: 122 IESPVGAALLGKRVGTTVTVRAPGGEMRFTIQRIE 156 >UniRef50_B4D3Z7 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Z7_9BACT Length = 609 Score = 138 bits (347), Expect = 8e-32, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q + ++ EK + E D L + + PE + I AR +GDL+EN E+ AA+E Q R Sbjct: 452 QTLIVSWESMEKKKAEYDDLVNKKIPENVKEIQVARSYGDLRENFEFKAAKEMQRVLSRR 511 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + E L+ A+ D P+ +V G VT+ Y I+G + D + ++S Sbjct: 512 RAETERDLAQARGTDFAN-PDTAQVSVGTIVTLKETGDGRTDVYTILGAWDGDPDKGIVS 570 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 S +A+ LIG + + V + T G+ + K+E Sbjct: 571 YQSALAQALIGHKPGEQVNVPTEHGDRTARIEKIE 605 >UniRef50_C0QWD9 Transcription elongation factor n=2 Tax=Brachyspira RepID=C0QWD9_BRAHW Length = 154 Score = 137 bits (346), Expect = 9e-32, Method: Composition-based stats. Identities = 64/152 (42%), Positives = 95/152 (62%), Gaps = 2/152 (1%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 P+T G +K + +L LK+ + A IAEARE GDLKENAEYHAA+E+QG +I Sbjct: 4 PITKEGYDKAKSKLADLKA-EFETLPAIIAEAREKGDLKENAEYHAAKEKQGLLNAQISK 62 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +E+ L+ ++ID + + V FG V V + + YRIVG+ EAD +N I++ + Sbjct: 63 LESDLAGCEIIDPANLDKD-TVTFGKRVKVKDKSRNAVFEYRIVGELEADMSKNEITIVT 121 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 PIA+GL+GK+ DVV IK P G+ E++++ Sbjct: 122 PIAKGLLGKKIGDVVTIKVPAGDKVLEILEIS 153 >UniRef50_B9E669 Transcription elongation factor n=5 Tax=Clostridium RepID=B9E669_CLOK1 Length = 157 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 57/154 (37%), Positives = 88/154 (57%), Gaps = 2/154 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 MQ + +T G +KL EEL++LK+V+R EI AA+ AR GDL ENA+Y AA+E Q E Sbjct: 4 MQDVILTEAGKKKLEEELEYLKTVKRVEIKAALKAARAQGDLSENADYSAAKEDQSMTET 63 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI+++E +L NA +I+ + + + A V ++D E + +V E+D K I Sbjct: 64 RIQELEYQLKNAVIIESSLETDVFDINRTALVKFYDVD--EVEEVTLVSSVESDVKNMRI 121 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 S+ SP+ + L + D + +P G + EV K Sbjct: 122 SIESPLGKALFRLKVGDKATVISPDGNYDVEVEK 155 >UniRef50_C7N7T1 Transcription elongation factor n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N7T1_SLAHD Length = 155 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 57/157 (36%), Positives = 88/157 (56%), Gaps = 5/157 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 +T G EKL EL +L++ +R E+ I ARE GD+ EN+EY A+ +QG E R Sbjct: 3 NDYVLTPEGKEKLEAELLYLENEKRAEVGERIKIAREFGDISENSEYDDAKNEQGMLEVR 62 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I I L+NA V++ K + RV G+TVTV E+ + IVG EA+ + IS Sbjct: 63 IAQINDILANATVVEAPK--RSNRVTVGSTVTV--DMGGRERVFTIVGGAEANAAEGKIS 118 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 +SP+ L+G ++ D + + P G ++E V+ +E+ Sbjct: 119 NDSPVGSVLLGSKKGDQLTTEGPTGRKIEITVLNIEH 155 >UniRef50_A9BFC0 Transcription elongation factor greA n=12 Tax=Thermotogaceae RepID=GREA_PETMO Length = 159 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 1/156 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T G EKL+ E + LK E+ I EARE GDL EN+EY A+ +QG + R Sbjct: 4 QVYQLTREGYEKLKREREELKKRLMGEVAERIKEARELGDLSENSEYEEAKNEQGMIDSR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 IK+I+ L NA++I+ +N V G V + + + EQ + +V EA+ ++N IS Sbjct: 64 IKEIDYILDNAEIIENGGNHDNSTVSLGKKVKIKDYRLNREQEFVLVTPQEANIEENKIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 + SPI R L+G+++ +V+ IKT G + E+ ++ Sbjct: 124 IESPIGRSLLGRKKGEVINIKTARGSSKKIEIKEIS 159 >UniRef50_C7T958 Transcription elongation factor n=4 Tax=Lactobacillus rhamnosus RepID=C7T958_LACRG Length = 165 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 4/152 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G L++E+ LK++ RP I +AEA GD ENAEY AA+ + EGR++ + Sbjct: 7 ITPAGLANLKQEVADLKAI-RPAKIKNLAEAAALGDRSENAEYSAAKRELRQLEGRLRYL 65 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + + A+V G VT+ D +E TY +VG EA +++NSP Sbjct: 66 DKLIRYAKVTTPAAANLAD---IGNWVTLEFDDDQDEDTYELVGPAEAGMGAAKLAINSP 122 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 + + D V + P G + V+ + Sbjct: 123 LGAAVRRHHVGDTVTVTAPSGTYQVTVMAISP 154 >UniRef50_Q04UP0 Transcription elongation factor n=6 Tax=Leptospira RepID=Q04UP0_LEPBJ Length = 927 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 54/152 (35%), Positives = 90/152 (59%), Gaps = 1/152 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 I +T R + +EE + L +V PE I EA+E GDL+ENAEY AA E+Q + IK Sbjct: 767 ILVTRRALNRKKEEFEHLLNVEMPENSKDIGEAQERGDLRENAEYKAAMERQVQLQAAIK 826 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +EA++ +A ++D+T + ++ G T + N + E Y I+G +AD ++++IS Sbjct: 827 RLEAEIKSAIILDLTNV-KTDKINIGVTAKLKNESTGEVVAYSILGAWDADTEKHIISYQ 885 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+A+ L+GK+ D V+ G E + V+++ Sbjct: 886 SPLAKSLLGKKVGDAAVLNLTGAETRYTVLEI 917 >UniRef50_Q2S2N3 Transcription elongation factor n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2N3_SALRD Length = 164 Score = 135 bits (339), Expect = 6e-31, Method: Composition-based stats. Identities = 68/155 (43%), Positives = 100/155 (64%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + MT G E+L+EEL LK+ R I IAEAR GDL ENAEY AA+E+QG E R Sbjct: 10 ETVYMTEEGLEELKEELHQLKTEERSRIADEIAEARAKGDLSENAEYDAAKEEQGKLEAR 69 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 IK IE ++ A+++D + + ++ + + VTV NLD+ +EQT+ +V ++EA+ +N IS Sbjct: 70 IKQIEDTIARARIVDESTV-DDSKAYILSDVTVENLDTGDEQTFTLVSEEEANISENKIS 128 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 V+SPI GL+ +EE D V I P G V F++ + Sbjct: 129 VDSPIGEGLLAQEEGDEVSIDVPAGTVHFKIKDIS 163 >UniRef50_A4E9C2 Transcription elongation factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9C2_9ACTN Length = 156 Score = 135 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 5/156 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T G +KL EEL + + EI+ I EAR GDL EN+EY AA+++Q R Sbjct: 4 SQIVLTAEGRQKLVEELAWREGDYAKEIVEDIKEARAFGDLSENSEYDAAKDKQAQNAAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +I+A L+NAQV + V G+TV++++ + E +VG E + ++ IS Sbjct: 64 IAEIQAILANAQV---AATTGDLTVSIGSTVSLIDP-NGEVMEVTLVGTTETNSLEHKIS 119 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 SP+ +IG E D V + TP G + + K+ Sbjct: 120 NESPVGHAIIGHGEGDSVEVVTPSGKTRVYTIAKIA 155 >UniRef50_C8W826 Transcription elongation factor n=7 Tax=Coriobacteriaceae RepID=C8W826_ATOPD Length = 159 Score = 134 bits (338), Expect = 8e-31, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 3/155 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T G +KL +EL + + + EI+ I EAR GDL EN+EY AA+E+Q E R Sbjct: 5 KEIVLTPEGRQKLVDELAYREGEKHDEIVERIKEARGFGDLSENSEYDAAKEEQSHNESR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +I LS A+V++ V G TV + + + Y IVG E + ++ IS Sbjct: 65 INEIRQILSVAKVVE-GGSKRKVTVAIGTTVELADAK-GKTTKYVIVGTTETNSLEHKIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKV 155 SP LIG ++ D V TP G+ ++ +I + Sbjct: 123 NESPAGEALIGHKKGDEVEFTTPNGKVKKYTIISI 157 >UniRef50_B0N6V6 Transcription elongation factor n=4 Tax=Bacteria RepID=B0N6V6_9FIRM Length = 161 Score = 134 bits (338), Expect = 8e-31, Method: Composition-based stats. Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 4/158 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G EKL +E D L +V RP++I + AR GDL ENA+Y AARE+Q E R Sbjct: 4 EKVLLTQSGVEKLEQERDNLINVERPKVIEELQLARSQGDLSENADYDAAREKQAHLESR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLN--LDSDEEQTYRIVGDDEADFKQNL 119 IK+I+ L NA+VI +M + V G TVT+L+ E ++Y+IVG E D Sbjct: 64 IKEIDYMLQNAEVISEEQM-DLKVVKPGTTVTILDLSEKDAEPESYQIVGYTETDPLNGK 122 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 IS SP+A+ ++G +++V + + +++ +E+ Sbjct: 123 ISNESPLAKAVLGHGVNEIVTVGVAD-PYDVKIVNIEF 159 >UniRef50_UPI0001C31C12 transcription elongation factor GreA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C12 Length = 154 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 4/150 (2%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G + LR EL+ L++V R EI A I ARE GDLKENAEYHAA+E Q E RI + Sbjct: 7 ITQEGLDALRAELEQLETVARREIAARIRTAREWGDLKENAEYHAAKEDQAHLETRILKL 66 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 + NA V + + + V FG+TV V + Y +VG EA + +S+ SP Sbjct: 67 RERERNATVTEAS--SDVDIVAFGSTVEVE--TGGKNARYTLVGAAEASARDGKLSIESP 122 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +AR LIG + V ++TP G V++V Sbjct: 123 VARALIGARAGEDVQVQTPSGARILRVVRV 152 >UniRef50_C7PP41 Transcription elongation factor n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PP41_CHIPD Length = 157 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 60/152 (39%), Positives = 96/152 (63%), Gaps = 1/152 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 +T +++REEL FLK+ R EI AIAEARE GDLKENAEY AA+E QG E ++ Sbjct: 5 NYVTKETLDQMREELSFLKTKGRAEIARAIAEAREKGDLKENAEYDAAKEAQGMHEAKVA 64 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +E+ ++ A++++ + + +V VT+ N+ + + TY++V + EAD K N ISV Sbjct: 65 ILESAIATARIVEADSI-DTSKVSILCKVTITNMANKKTVTYQLVSEKEADLKLNKISVT 123 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SPI +GL+GK ++ + P G ++F++ + Sbjct: 124 SPIGKGLLGKAVGEIADVHAPNGSLKFKIENI 155 >UniRef50_UPI0000E87FB5 transcription elongation factor GreB n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FB5 Length = 144 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 76/144 (52%) Query: 14 LREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQ 73 ++ EL L + RPE + I+ A +GD EN +Y +++ + RIK + + +A Sbjct: 1 MQRELSSLIKLDRPETVKVISWAAGNGDRSENGDYIYGKKKLRQIDSRIKFLLTAIEDAD 60 Query: 74 VIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGK 133 ++ + + +V FGA V +L+ S RIVG E + IS SP+A+ LIG+ Sbjct: 61 IVHPSTSIDKKKVYFGANVKLLDEQSKSTLDIRIVGAHEINHNIGNISWLSPLAKALIGR 120 Query: 134 EEDDVVVIKTPGGEVEFEVIKVEY 157 D++ ++TP + ++KV+Y Sbjct: 121 TSSDLIEVQTPMNIKTYIILKVDY 144 >UniRef50_A5IYH4 Transcription elongation factor greA n=3 Tax=Mycoplasma RepID=GREA_MYCAP Length = 163 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 3/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I ++ K + E L +V RP + A++ EAR GDL ENAEY AAR++Q E R Sbjct: 7 EKIYLSEETYNKYKNEYTELVTVERPAVQASLKEARAQGDLSENAEYDAARDRQSEVERR 66 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E L NA++ID TK + GATV LN+ +++E I+G +++ +N IS Sbjct: 67 ILELERILENAEIID-TKSAVQNKAGIGATVRYLNMKTNKELVVTIMGPHDSNPIENKIS 125 Query: 122 VNSPIARGLIGKE-EDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ ++ DVV ++ P + +V+ + Y Sbjct: 126 NESPVAQAIMEANGIGDVVEVEVPQ-KYNIKVLDISY 161 >UniRef50_B2V1C0 Transcription elongation factor n=28 Tax=Clostridium RepID=B2V1C0_CLOBA Length = 155 Score = 133 bits (334), Expect = 2e-30, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 1/154 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 +T +KL+EEL++ +V+R EI A HGD ENAEY A + RI+ Sbjct: 3 NTLTEENMKKLQEELEYRLTVKRAEIAKEKLVAAAHGDRSENAEYKEACANYRENDNRIQ 62 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 + +S A VID T++ + + + + ++ D+E +V + D + LIS+ Sbjct: 63 YLMTMISTATVIDDTEIDKSS-LGINSKARIKFVEDDDEDVITLVTTMDLDPENMLISIE 121 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 S + + L+GK+ + V ++ PG + +++++ Y Sbjct: 122 SDLGKALMGKKAGETVEVEAPGAKYTVKILEILY 155 >UniRef50_Q1H282 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=Q1H282_METFK Length = 165 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 16/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G + L+++ L+ R+P + A +++ + + Sbjct: 27 PNYVTPHGFKLLQQQASALEQERQPLTMRKDDPAV--------------QQRLAMIDRDL 72 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + ++A+L +A V+D P V+FGATV V + ++ T+ IVG+DEAD N +S Sbjct: 73 RYLQARLESAIVVDPATQP-TDTVLFGATVEVED-ENGNSHTFMIVGEDEADIATNRVSW 130 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ LIG++ D V P G +E E+I + Y Sbjct: 131 VSPLAKALIGQKIGDSVTWHRPAGNLELEIIAIHY 165 >UniRef50_B1ZZX3 GreA/GreB family elongation factor n=3 Tax=Verrucomicrobia RepID=B1ZZX3_OPITP Length = 616 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + ++ E+ REE + + S + PE AIA AREHGDL+EN+EY A+++Q Sbjct: 456 EQLIVSKASYERKREEYETIVSKKIPENSKAIAAAREHGDLRENSEYKMAKQEQQVLMAH 515 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++E L A++ D + +V G V V ++ TY ++G + D +++ IS Sbjct: 516 KTNLERDLGRARISDFKDASID-QVSVGTVVEVASVKDGHHTTYTVLGAWDGDPEKHFIS 574 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +P L+GK+ DV+ +KT + ++ ++ + Sbjct: 575 YKTPFGAALLGKKTGDVINVKTDASDEDYAIVSIA 609 >UniRef50_C1F9R4 Transcription elongation factor GreA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9R4_ACIC5 Length = 165 Score = 131 bits (331), Expect = 5e-30, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 87/143 (60%), Gaps = 1/143 (0%) Query: 12 EKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSN 71 +KL E++ L+ E+ A I +A GDL ENAEYH A+++Q F R+ ++ +++ Sbjct: 7 KKLLEDIKQLEHELAHELPAEIKKAAALGDLSENAEYHMAKQRQEFVNARLGQLKKRMAE 66 Query: 72 AQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLI 131 ++++ +P++ RV FG+TV V + DE+ Y++V +E+D + LIS SPI R LI Sbjct: 67 LSLVNLANIPHD-RVAFGSTVEVFDTSKDEKIEYKLVTSEESDVSKGLISTTSPIGRALI 125 Query: 132 GKEEDDVVVIKTPGGEVEFEVIK 154 GK+ D + TP G E EV+K Sbjct: 126 GKQVGDTATVVTPSGNRELEVLK 148 >UniRef50_B3DVF3 Transcription elongation factor GreA fused to uncharacterized associated domain n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVF3_METI4 Length = 614 Score = 131 bits (330), Expect = 6e-30, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 2/154 (1%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + ++ E+ ++ELD L + PE IA AR +GDL+EN EY AA+E Q R Sbjct: 453 LIVSWESLEQKKKELDELVRKKIPENSKDIAHARSYGDLRENHEYKAAKEMQVVLMRRKA 512 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++E+ +S A+ D + + + V G V+ +L ++ + I+G +++ + +IS Sbjct: 513 ELESMISRARATDFSNV-DTTTVNIGTVVSYTDLKTNRTNSVAILGAWDSNPSKGIISYL 571 Query: 124 SPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 + + L+G + DV+ + G E + K+ Sbjct: 572 AAFGQSLLGHKTGDVLQVSLEDGITTEIRIDKIS 605 >UniRef50_A9NGN4 Transcription elongation factor greA n=7 Tax=Acholeplasmataceae RepID=GREA_ACHLI Length = 158 Score = 131 bits (330), Expect = 7e-30, Method: Composition-based stats. Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 3/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G ++L++EL LK V+R E + A+ EARE GDL ENA+Y AAR +Q E R Sbjct: 5 KVYELTQSGLDQLKDELTHLKDVKRVENLEALKEAREQGDLSENADYDAARNEQARIEAR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +IE+ L N ++I ++ V G V + ++ +++ Y +VG EAD K IS Sbjct: 65 ILEIESILKNVKIIRTND--DSTTVNIGKKVLLHFVEKNKDVEYHVVGTIEADPKNFKIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVE 156 + SP+ R + GKE D+V IK+ + E+ + Sbjct: 123 IESPLGRAIKGKEVGDLVQIKSATNKQSNVEIKAIS 158 >UniRef50_Q03RN4 Transcription elongation factor n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RN4_LACBA Length = 132 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 76/132 (57%), Gaps = 2/132 (1%) Query: 24 VRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNN 83 V+RP++I I AR +GDL EN+EY +A+++Q E RI +E L AQ+ID + Sbjct: 2 VQRPKVIDRIKIARSYGDLSENSEYESAKDEQSMLETRISTVERMLQYAQIIDNDD-TDK 60 Query: 84 GRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKT 143 + G VT D DE + Y IVG EAD IS +SPIA+GL+G + V T Sbjct: 61 DEITVGKKVTFQ-EDDDEPEEYTIVGAAEADPMSGKISNDSPIAKGLLGHRVGETVTFPT 119 Query: 144 PGGEVEFEVIKV 155 PGG++ +VI V Sbjct: 120 PGGDMTVKVIAV 131 >UniRef50_B5Y9H5 Transcription elongation factor n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9H5_COPPD Length = 163 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 3/156 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G +K+ EEL +LK V+R E+ I EAR GDL EN+E+ AA+E+Q E R Sbjct: 6 EEAILTEEGYKKILEELKYLKEVKRKEVAEKIQEARALGDLSENSEFEAAKEEQALLEER 65 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVG-DDEADFKQNLI 120 I +E + NA+V+ + + +V G V VL+ + E+++ IVG +E D I Sbjct: 66 IARLETLVYNARVVKAEDLALD-QVSVGTKVLVLDESAGREESFIIVGNSEEVDPFSGKI 124 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKV 155 S SP+ L+G++ D V IK G +E++ + Sbjct: 125 SSKSPLGSRLLGRKRGDRVEIKLRNGSKAVYEILDI 160 >UniRef50_B9XT30 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XT30_9BACT Length = 606 Score = 130 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 1/154 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + ++ E+ + E L + P IA AR +GDL+EN EY AA+E Q R Sbjct: 450 LIVSWDSLERRKNEYAELVQKKIPANSKEIAIARSYGDLRENHEYKAAKEMQKILMRRKA 509 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++E++L A+ D P V G V V +L+S + + I+G ++D ++N+IS Sbjct: 510 ELESELVRARGTDYLN-PKTDAVSIGTIVKVTDLNSSHIEHFNILGAWDSDPEKNVISYL 568 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +P+A+ L+ ++ + V + G + F + ++ Sbjct: 569 APLAQSLLNRKPGEEVDYEMDGQKRRFRIDEITP 602 >UniRef50_B0VIH5 Putative transcription elongation factor n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIH5_9BACT Length = 159 Score = 130 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 92/155 (59%), Gaps = 6/155 (3%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T G ++L++ ++ L + RPE+I A+A ARE GDL ENAEY AARE+Q + I + Sbjct: 7 ITKTGMQRLQKRINELLA-ERPEVIKAVAIAREFGDLSENAEYKAARERQRAIDNEIDYL 65 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN----LIS 121 + +N +VID ++ P + V FG ++++ E Y +VG +E ++ +S Sbjct: 66 RRRSANLKVIDTSEFPKD-MVRFGTYCVAEDINTKECICYHLVGPEELNYYNEEGIQEVS 124 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + SPI + L+ K+ ++ ++K P GE + ++ +++ Sbjct: 125 IVSPIGKALLSKKIGEIAIVKAPIGERKLKIREIK 159 >UniRef50_D0KZQ0 Transcription elongation factor GreB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZQ0_HALNC Length = 175 Score = 130 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 7/162 (4%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M ++ RG +L ELD L V R ++ A++EA GD ENAEY + + + Sbjct: 1 MSTAVISARGHARLLAELDQLWRVERRLVVQAVSEAAALGDRSENAEYIYGKRRLREIDR 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI+ ++ +L + +V+ + +V FGA +T+L D EQT +VG DE D LI Sbjct: 61 RIRYLQKRLGDIKVVR-QPPTDMNKVYFGARITLLYADD-REQTVCLVGPDEIDPANQLI 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGE-----VEFEVIKVEY 157 S++SP+A+ ++GK D VV+ P V E+I +EY Sbjct: 119 SIDSPLAKAVLGKALDAEVVLFLPSETSTPRRVHAEIIAIEY 160 >UniRef50_Q4A759 Transcription elongation factor greA n=4 Tax=Mycoplasma RepID=GREA_MYCH7 Length = 160 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 3/154 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T + E++ +EL+ L +V R +I I +AR GDL ENAEY ARE+QG E R Sbjct: 7 DKILLTQQKLEEIEKELEHLINVERVNVIQEIKDARSQGDLSENAEYDVAREKQGIIESR 66 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+++E +S A++I + RV G+ V++ N++S E QT++IV +AD ++ IS Sbjct: 67 IRELETIISKAKIIKADL--GSSRVSIGSKVSLENVESGEIQTFQIVSSIDADPFKSKIS 124 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SPIA+ L+G+ + D V + + +++V Sbjct: 125 NFSPIAQALLGQHQGDEVEVDV-NEKYSVRILEV 157 >UniRef50_B2S1W7 Transcription elongation factor greA n=6 Tax=Treponema RepID=GREA_TREPS Length = 162 Score = 128 bits (323), Expect = 4e-29, Method: Composition-based stats. Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 1/153 (0%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + +T + ++EL L VR PE I A E GDL+ENAEY AARE+Q + Sbjct: 7 LVVTAKMLNAKKKELQDLLDVRIPENSREIGRALELGDLRENAEYKAAREEQTRLNNMVT 66 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++ ++ AQV D T + GRV FG +++ N S E++TY I+G E+ ++ +IS Sbjct: 67 RLQEEIERAQVFDPTTV-VAGRVSFGTVISLKNHTSGEDETYTILGPWESAPERGIISYM 125 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ L+ ++ + + E +E++ + Sbjct: 126 SPLGSNLLNRKTGEQLAFTVGEHEKVYEILSIS 158 >UniRef50_B2KBD2 GreA/GreB family elongation factor n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBD2_ELUMP Length = 156 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 58/157 (36%), Positives = 99/157 (63%), Gaps = 2/157 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ ++ + EKLRE+L LK ++ ++ I EA + GDL+ENAEY AA+ +Q Sbjct: 1 MEKYYLSRKNYEKLREDLTALKEIK-AKLSLEIGEAAQQGDLRENAEYAAAKSRQEETLV 59 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 +I+D+E KL NAQ+ D ++ + GATVTV ++ +D + TY +VG E++ ++ L+ Sbjct: 60 KIQDLEQKLRNAQITDDIQV-DKSEARIGATVTVHDISADIDFTYTLVGSMESNPEKGLL 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV SP+A ++GK+E + P G+ ++++K+EY Sbjct: 119 SVQSPLAVSILGKKEGEEFEAVLPKGKKMYKLVKLEY 155 >UniRef50_B2UNZ9 GreA/GreB family elongation factor n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNZ9_AKKM8 Length = 615 Score = 128 bits (322), Expect = 5e-29, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 3/157 (1%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I ++ E ++EL+ L +V+ PE + +R GDL+EN Y A+E + R Sbjct: 457 EPIFVSWESLEARKKELEELVNVKIPENLHNKKISRAEGDLRENGGYQDAKEVEKVLNRR 516 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++E L+ A+ D + + R G VT+ L+ E Y I+G + + +++++S Sbjct: 517 RAELEHALALARGTDFA-VTDTSRAAMGTKVTLQPLNGGEPVVYTILGAWDTNPEKHIVS 575 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVE--FEVIKVE 156 S + + L GK D V I G+ + + + K+E Sbjct: 576 YLSQVGKELTGKSVGDQVKIVPMDGDKKKVYTITKIE 612 >UniRef50_Q04HS9 Transcription elongation factor greA n=90 Tax=Bacilli RepID=GREA_STRP2 Length = 160 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 66/155 (42%), Positives = 96/155 (61%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMTL EKL +EL+ LK VRRPE++ I AR +GDL EN+EY AA+++Q F EG+ Sbjct: 4 KTYPMTLEEKEKLEKELEELKLVRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQ 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E K+ A++++ + + V G TVT+ + DEE+ Y IVG AD +S Sbjct: 64 ISSLETKIRYAEIVNSDAVAQD-EVAIGKTVTIQEIGEDEEEVYIIVGSAGADAFAGKVS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPI + LIGK+ D I+TP G + +++KVE Sbjct: 123 NESPIGQALIGKKTGDTATIETPVGSYDVKILKVE 157 >UniRef50_B9XEY1 GreA/GreB family elongation factor n=1 Tax=bacterium Ellin514 RepID=B9XEY1_9BACT Length = 170 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 15/155 (9%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T GA++LR EL+ L++ +R + G+ N A+ + I Sbjct: 30 KNYLTPDGAQRLRAELNRLQAEKRSQT--------ATGEFSGN-----AQTEMQLVGQHI 76 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 +E L+ A+++ P +V FGATVTV + +E + YRIVG DE D ++ +S Sbjct: 77 LQLEQSLATAEIVPPPPQPWE-QVRFGATVTVRDESGNETR-YRIVGVDETDIDRDWVSW 134 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SPIAR LI + V + P GE + E++ + Y Sbjct: 135 LSPIARALINARIGERVHFRFPAGEKQLEIVSITY 169 >UniRef50_A6NPJ1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPJ1_9BACE Length = 197 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 2/149 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T + + +REELD+ + RP+++ A+ EAR GDL EN EY AA++++ E RI+ + Sbjct: 35 LTRKDLQMMREELDYRRITLRPQLLEAVKEARGFGDLSENFEYKAAKQEKNRNESRIRFL 94 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E + A VI P V VTV + DE +TY++V D IS SP Sbjct: 95 ENMIRTAVVISDQAAP--DTVGLYDKVTVYLEEDDETETYQVVTTMRQDALHGRISKESP 152 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 + L+GK D + I+ + VIK Sbjct: 153 VGSALLGKRVGDRIYIQVNDNYGYYVVIK 181 >UniRef50_C7M0F0 GreA/GreB family elongation factor n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0F0_ACIFD Length = 160 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 2/158 (1%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M + ++ + L +EL+ L + R EI AI AR GDL EN +YHAA++ QG E Sbjct: 1 MSEVEISQATYDALVQELEELTTQGRIEIAKAIEAARALGDLSENGDYHAAKDAQGKMEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI+ I+ L +A+V+ + V G V + D+ + Y + +E ++ Sbjct: 61 RIRQIQQILQSARVV--SADLPTDEVRPGVVVGLRYEGEDDVEHYLVGSIEERHPGLEVV 118 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 S SP+ L+G V + P G ++ +V+++ L Sbjct: 119 SPTSPLGEALLGARVGAWVEYEAPRGTLKVQVVEIGPL 156 >UniRef50_A7VBG3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VBG3_9CLOT Length = 195 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 3/153 (1%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 +T +K+ EE+++ K V R E + A+ EAR GDL EN EY+AA++ + E RI+ Sbjct: 33 NQLTESDIKKMEEEIEYRKVVVRKEKLEAVKEARAQGDLSENFEYYAAKKDKNANEKRIR 92 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++ + A++I + V TV V + +EE TYRIV D +IS Sbjct: 93 YLDRMVRTAEII--KDESADDEVGLNNTVRVYFEEDEEEDTYRIVTTVREDVLNGIISNI 150 Query: 124 SPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKV 155 SP+ + L+G + D V + G+ + ++ Sbjct: 151 SPMGKALLGHKVGDRVEVVPGKGDPFHIVIREI 183 >UniRef50_C4ZAT8 Transcription elongation factor GreA n=21 Tax=Firmicutes RepID=C4ZAT8_EUBR3 Length = 167 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 3/152 (1%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +K+ +E+++ K V R + + + AR GDL EN EY AA++ + E RI+ + Sbjct: 5 LTANDIKKMEDEIEYRKLVVRKKALDDVKVARAQGDLSENFEYKAAKQFKNQNESRIRYL 64 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 E + A VI + + V TV V D DE +TY+IV + +NLIS SP Sbjct: 65 EKMIKTAVVI--SDESKDDEVGMFNTVDVYFEDDDETETYKIVTTVRGNSLKNLISKESP 122 Query: 126 IARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 + + G + D +K +++K++ Sbjct: 123 LGAAIFGHKVGDRCEVKVNDDYSYFVKIMKIQ 154 >UniRef50_A2RGA4 Transcription elongation factor greA n=111 Tax=Firmicutes RepID=GREA_STRPG Length = 160 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 1/155 (0%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + PMTL E+L +EL+ LK VRRPEI+ I AR +GDL EN+EY AA+++Q F EG+ Sbjct: 4 KTYPMTLTEKEQLEKELEELKLVRRPEIVERIKIARSYGDLSENSEYDAAKDEQAFVEGQ 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I +E K+ A++ID + + V G TV V + + ++ TY IVG AD IS Sbjct: 64 ISTLETKIRYAEIIDSDAVAKD-EVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKIS 122 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SPIA+ LIGK+ D V I++P + E+I VE Sbjct: 123 NESPIAQALIGKKTGDKVRIESPAATYDVEIISVE 157 >UniRef50_A4F866 Transcription elongation factor greA n=44 Tax=Actinobacteria (class) RepID=GREA_SACEN Length = 162 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 5/158 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T ++L+ ELD L RP I A I EARE GDLKEN YHAARE+QG E R Sbjct: 5 QVTWLTQDAFDRLKSELDELVGN-RPVIAAKINEAREEGDLKENGGYHAAREEQGHLESR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE-ADFKQNLI 120 I+ ++ L A+V DV G G+ +TV D DE + + + +E A + Sbjct: 64 IRQLQELLRTAKVGDV--PTEAGVAKPGSVLTVRYDDEDETEKFLLATREEGAHGDLEVY 121 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPG-GEVEFEVIKVEY 157 S +SP+ + L+ +E + + P G ++ ++K E Sbjct: 122 SPSSPLGQALLDAKEGETREYELPNGGTMKVTLVKAEP 159 >UniRef50_UPI0001746370 transcript cleavage factor/unknown domain fusion protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746370 Length = 627 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 2/156 (1%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 ++ ++ EK + EL+ L V+ P+ I ARE+GDL+EN EY +AR+ Q Sbjct: 461 SLVVSWDSMEKRKIELEELVRVKIPQNKKDIQIAREYGDLRENFEYKSARQHQAVLLRMQ 520 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 E +L A+ D + V G V + ++ + + +T I+G + D Q+++S Sbjct: 521 STYERELRRARGTDFVGVS-TETVGIGTIVDLQDVGTGKTETQTILGAWDGDPDQSILSY 579 Query: 123 NSPIARGLIGKEEDDVVVIKTPG-GEVEFEVIKVEY 157 S +A+ LIGK D + T G + +++ + Sbjct: 580 LSEMAKALIGKRVGDEAELPTDTHGTRKVKIVSIRP 615 >UniRef50_A6DK30 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK30_9BACT Length = 693 Score = 125 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 53/152 (34%), Positives = 90/152 (59%), Gaps = 5/152 (3%) Query: 7 TLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIE 66 + R + L+EE + L + P+ AIA AREHGDL+EN E+ AA+++Q + + R+ +++ Sbjct: 537 SQRSYKALQEEHERLVNTEIPDNSKAIAAAREHGDLRENFEFRAAKDRQKYLQLRVGELD 596 Query: 67 AKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPI 126 A L+ D ++ RVI A VT+ + ++ E TY IVG + D +N +S +P+ Sbjct: 597 AMLNKIGPTDFSEFKVKNRVIPAAKVTIKSPEA--ETTYSIVGMLDGDPDKNWLSFETPL 654 Query: 127 ARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 A+ ++G + D + PGG+ E E++ VE L Sbjct: 655 AKSMLGHQVGDSIE--LPGGD-EAEILAVEPL 683 >UniRef50_D1CDC6 Transcription elongation factor n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDC6_THET1 Length = 159 Score = 125 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 61/158 (38%), Positives = 95/158 (60%), Gaps = 6/158 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T +G ++LREEL+ L++V R +I A I EA+E GD+ E+ EY A+ Q F EGR Sbjct: 5 ERVRLTEQGLKELREELERLRTVERAKISARIREAKEGGDISESGEYEDAKHSQAFLEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--- 118 IK++E L+NA+VID + P G V G+ VTV ++ TY IV EA ++ Sbjct: 65 IKELEKLLANAEVIDRSAQPA-GTVGLGSKVTVE--ENGRTYTYTIVDGAEAGRGRDGEV 121 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IS S + L+G+ D V ++ P G++ F+++ VE Sbjct: 122 RISSKSAVGSALLGRRVGDSVEVEVPAGKLTFKILSVE 159 >UniRef50_D1N5G0 GreA/GreB family elongation factor n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5G0_9BACT Length = 698 Score = 124 bits (312), Expect = 7e-28, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 84/157 (53%), Gaps = 5/157 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +++ ++L ELD + +V+ PE A+ AR HGD +EN+E+ AA+E++ F R Sbjct: 537 EPNYTSVKSHKRLMAELDDIINVQVPENREALKVARAHGDFRENSEFDAAKERRNFLSRR 596 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++E +L+ Q I + + + G+ + + + ++ E++ Y+++G + D ++ +S Sbjct: 597 RGELERELTRIQPISLKSVRVEDSAVIGSEIELQD-ENGEKEVYQLLGAWDGDPERRFLS 655 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL 158 + + + ++ ++ G ++++I V L Sbjct: 656 YRTRLGKAVLNRKVGSEFS----DGSRQYKLIAVRPL 688 >UniRef50_B8DTJ6 Transcription elongation factor GreA n=15 Tax=Bifidobacteriaceae RepID=B8DTJ6_BIFA0 Length = 160 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 7/159 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T +K++EEL + R EI IA AR GDL EN Y AARE+Q EGR Sbjct: 6 KVVLLTQEAYDKMKEELAHREGEYRDEITERIAAARAEGDLSENGGYQAAREEQSKNEGR 65 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDD-EADFKQNLI 120 I ++ KL NA++I+ P G V G+ VT+ E Y I D ++I Sbjct: 66 INELIVKLRNAKIIEA---PKAGEVGNGSLVTIEL--GGNEMQYVIGSRDITVATDYDVI 120 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEYL 158 S SPI +IG + DVV K P G E+ + + E L Sbjct: 121 SPESPIGGAIIGHKVGDVVTYKAPNGREISVTIKESEPL 159 >UniRef50_A0JU41 GreA/GreB family elongation factor n=21 Tax=Actinomycetales RepID=A0JU41_ARTS2 Length = 164 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 8/156 (5%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T ++L+ ELD L R EI+ I AR+ GDLKEN YHAA+E+QG E RI+ Sbjct: 11 WLTQEAFDRLKAELDHLSGAGRAEIVQKIEAARQEGDLKENGGYHAAKEEQGKIEARIRQ 70 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEA--DFKQNLISV 122 + L +A V + ++G V G V + +E+T+ ++G E D ++ S Sbjct: 71 LTVLLRDAHVGESPA--DDGIVEPGMIVVARI--AGDEETF-LLGSREIAGDSDLDVFSE 125 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 SP+ ++G +E D + P G+ + E++ + Sbjct: 126 KSPLGSAIVGHKEGDKLSYTAPNGKDITVEILSAKP 161 >UniRef50_Q6MF39 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MF39_PARUW Length = 723 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 7/158 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I T G K+++ + + +V E I AR GDL+EN+E+ A+E++ + Sbjct: 570 EEIWTTEEGYLKIQDRIRQIGTVEVVENAREIEAARALGDLRENSEFKFAQERRARLQSE 629 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 +K + + A++I + V G+ + +++ ++ Y I+G +AD ++N++S Sbjct: 630 LKTLSEQFGRARIITPDDI-LTDEVGIGSVIDLID-SQGQKIRYSILGPWDADPEKNILS 687 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV-EYL 158 +NS A+ +IGK+ D K + F+V+ + YL Sbjct: 688 LNSKFAQAMIGKKIGDQFQFK----DETFKVLSLHSYL 721 >UniRef50_C1A2Y4 Transcription elongation factor greA n=41 Tax=Corynebacterineae RepID=GREA_RHOE4 Length = 164 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 7/160 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T ++L+ ELD L + RP I A I E RE GDLKEN YHAARE+QG E R Sbjct: 5 QVTWLTQESHDRLKNELDQLIAN-RPVIAAEINERREEGDLKENGGYHAAREEQGQQEAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTV-LNLDSDEEQTYRIVGDDEA--DFKQN 118 I+ ++ L++A+V + +G + G+ V V + D + +T+ I +E D K Sbjct: 64 IRQLQELLNSAKVGE--APTQSGVALPGSVVKVYYDGDESDTETFLIATREEGARDAKLE 121 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 + S NSP+ L+ + D P G ++ ++ E Sbjct: 122 VYSPNSPLGGALLEAKVGDTREYNLPNGSTMKVTLLSAEP 161 >UniRef50_A1TE43 Transcription elongation factor greA n=11 Tax=Corynebacterineae RepID=GREA_MYCVP Length = 164 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 7/160 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T ++L+ ELD L + RP I A I + RE GDL+EN YHAAREQQG E R Sbjct: 5 QVTWLTEESYDRLKAELDQLIAN-RPVIAAEINDRREEGDLRENGGYHAAREQQGQEEAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE---ADFKQN 118 I+ ++ L+NA+V + K G + G+ V V D +++ ++G E +D K Sbjct: 64 IRQLQELLNNAKVGEAPKQS--GIALPGSVVKVYYDDDEKDTETFLIGTREQGVSDGKLE 121 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 + S NSP+ LI + + P G V+ ++ E Sbjct: 122 VYSPNSPLGGALIDAKVGESRSYTVPSGNTVKVTLVSAEP 161 >UniRef50_D1R523 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R523_9CHLA Length = 731 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 6/155 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I T G + +E + + + E I AR GDL+EN+EY A E++ +G Sbjct: 578 NTIWTTEEGYLQTQERIRQIGTTEVVENAREIEAARSLGDLRENSEYKFALEKRSRLQGE 637 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 +K + +L+ A++I + N +V G+ V + + + + TY I+G +AD N++S Sbjct: 638 LKRLSEQLNRARIITKDDIYLN-QVSVGSIVELEDPEKN-VVTYTILGPWDADADTNILS 695 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 S A ++G++ + + F + ++ Sbjct: 696 FQSKFAEAMLGRKVGEEFEFR----NQNFTIRTIK 726 >UniRef50_D2NP88 Transcription elongation factor n=2 Tax=Rothia mucilaginosa RepID=D2NP88_9MICC Length = 189 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 11/149 (7%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 +T ++L +EL++L R EI+ IA+AR+ GDL+EN YHAAR++Q E RIK Sbjct: 32 WLTQDAFDRLTQELEYLSGPYRQEIVDRIAQARDEGDLRENGGYHAARDEQAKNEARIKQ 91 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE------ADFKQN 118 ++ L A + D P + V+ V + + + ++G E A Sbjct: 92 LKHLLETAHIGD---TPADDGVVEHGMV-IEAEVAGRTLKF-LLGSREIEDTLPAGSDLK 146 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGE 147 + S SP+ ++G ++ D V P G+ Sbjct: 147 VFSEKSPLGAAIMGAKQGDEVTYTAPNGK 175 >UniRef50_Q9Z7G4 Transcription elongation factor greA n=13 Tax=Chlamydiaceae RepID=GREA_CHLPN Length = 722 Score = 120 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 81/155 (52%), Gaps = 6/155 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + T +++ +L L + I +AR GDL+EN+EY A E++ + Sbjct: 566 NVLWSTSESFSRMKAKLQSLVGKEMVDNAKEIEDARSLGDLRENSEYKFALEKRARLQEE 625 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+ + +++ A+++ + +V G VT+ D+ E Y I+G +AD ++S Sbjct: 626 IRVLSEEINRARILT-KDLVFTDKVGVGCKVTLK-GDAGEVVEYTILGPWDADPDSCILS 683 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 + S +A+ ++GK+ +DVV+++ E+++ +++ Sbjct: 684 LQSKLAQNMLGKKLNDVVILQG----KEYKISRIQ 714 >UniRef50_B2GLP4 Transcription elongation factor n=3 Tax=Actinomycetales RepID=B2GLP4_KOCRD Length = 165 Score = 119 bits (299), Expect = 2e-26, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 12/163 (7%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T ++L++ELD++ R EI+ I +AR GDLKEN YHAARE+QG EGR Sbjct: 5 EGAWLTQEAYDRLKKELDYIAGPYRQEIVDRIEQARSEGDLKENGGYHAAREEQGKNEGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE------ADF 115 I + L NAQV + ++G + G VT + +E T+ ++G E Sbjct: 65 IVQLTQLLENAQVGEAPA--DDGVIEAGMVVTAEI--AGDEMTF-LMGSREVAEDLTGGE 119 Query: 116 KQNLISVNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 + S SP+ + G + + V + P G+ + +++K + Sbjct: 120 DLEVFSERSPMGAAINGHKVGETVSYQAPNGKDITVKILKAKP 162 >UniRef50_Q4K5S3 Transcription elongation factor GreB n=3 Tax=Pseudomonas RepID=Q4K5S3_PSEF5 Length = 197 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 18/156 (11%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T +G +L+ + L ++ E DL ++A+ +++ E Sbjct: 59 QPNYVTPQGLAELQARVALL-----------HSQHSEQNDLGDDAD----KQRMAELERD 103 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ +L +AQV+ + +V G+ VT + +Q+ ++VG+D+AD + LI+ Sbjct: 104 LRYFTQRLHSAQVVTTAN--STDKVQIGSRVTFADEQD-RQQSVQLVGEDQADAAKGLIN 160 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+ R L+G + D V+ + P G E+I++E Sbjct: 161 WASPLGRALLGAQPGDEVLWQRPAGNQLIEIIRIEP 196 >UniRef50_A9KJU6 GreA/GreB family elongation factor n=8 Tax=Clostridiales RepID=A9KJU6_CLOPH Length = 167 Score = 118 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 84/151 (55%), Gaps = 2/151 (1%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 +T +K++EE+++ K R E I A+ EAR HGDL EN EY+AA++ + EGRI+ Sbjct: 3 NRLTKNDIDKMQEEIEYRKLTVRKEAIDAVKEARAHGDLSENFEYYAAKKDKNKNEGRIR 62 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 +E + A+VI+ + + TV++ + +E + Y+++ + Q LIS+ Sbjct: 63 YLERMIKTAEVIE--DHSSEDEIGINNTVSIYFEEDNEIEKYKLITTVRENSLQGLISIE 120 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 SP+ + ++G + +D V +K + +IK Sbjct: 121 SPLGKAILGHKVEDRVYVKVRDDYGYYVIIK 151 >UniRef50_A6STV7 Transcription elongation factor GreB n=2 Tax=Oxalobacteraceae RepID=A6STV7_JANMA Length = 175 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 9/155 (5%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G L++EL L V RP A D + A A E RI Sbjct: 26 RNYITPDGYRHLQQELQQLLDVARP--------AAMQMDAADTAMASAQEASLREIEQRI 77 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 ++ ++ +A+V+D + + R+ FGA+V N + E T IVG DE D Q IS Sbjct: 78 HYLQTRVESAEVVDASVHADGDRIFFGASVDYEN-TAGETHTATIVGLDELDPAQGRISW 136 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ L+G EE D V+++TP G E V+ V Y Sbjct: 137 LSPLAQSLLGAEEGDTVLLQTPAGPEELHVLTVRY 171 >UniRef50_A1A150 Transcription elongation factor GreA n=6 Tax=Bifidobacterium RepID=A1A150_BIFAA Length = 159 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 7/159 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + I +T +K++EEL + + R EI++ ++ AR GDL EN Y AARE Q +GR Sbjct: 5 KTILLTQEAYDKMKEELAWREGEYRDEILSKVSAARAEGDLSENGGYQAAREAQRVNQGR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ-NLI 120 I ++ KL NA+++ P G V G+ VT+ + E Y + D + ++I Sbjct: 65 IDELTVKLRNAKIL---TAPKAGEVGDGSLVTLEV--NGREMVYVLGTRDLSIATDYSII 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEYL 158 S SPI + G D V P G E+ + + + L Sbjct: 120 SPESPIGAAINGAHAGDTVTYTAPNGREISVTIKEAKPL 158 >UniRef50_B1AIU2 Transcription elongation factor greA n=28 Tax=Ureaplasma RepID=GREA_UREP2 Length = 156 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 1/155 (0%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M ++ E+L+ EL + V+ P I + +ARE GDL ENA+Y AA+ +Q + Sbjct: 1 MAKYTISKHRLEELQLELREILDVKWPAITKQLQDAREQGDLSENADYDAAKNEQAALKK 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 R +IE L N ++I+ + + V G+T+ + N D E+ +VG ++D N I Sbjct: 61 RKDEIEEILENYELIE-DVLRSTDEVSIGSTIEIYNYQKDCEEVITLVGSMDSDPFANKI 119 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 S+++P+ + L+ +++ V + T + ++IK+ Sbjct: 120 SIDTPLGKALVKQKKGTEVTVHTLASPYKVKIIKI 154 >UniRef50_D2KXD7 Transcription elongation factor n=1 Tax=Lactobacillus fermentum RepID=D2KXD7_LACFE Length = 303 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 10/139 (7%) Query: 1 MQAIP---MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGF 57 M I MT G + E+++ LK +RP +IA + AR GDL EN EY A+ + Sbjct: 12 MAKIYYQEMTPAGYRAIEEQIEALKQ-KRPTLIARLKAARVLGDLSENTEYSTAKRELRH 70 Query: 58 CEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVG---DDEAD 114 E ++ ++ +L+ A+VIDV+ +G+V G VT+ LD EE TY+IVG ++A Sbjct: 71 LESCLRYLDKQLTYAKVIDVSD---DGKVALGKVVTIRFLDDQEEATYQIVGRYQAEQAS 127 Query: 115 FKQNLISVNSPIARGLIGK 133 + +++ +SP+ L GK Sbjct: 128 LTEEVLAFDSPLGLALKGK 146 >UniRef50_C4RPW8 Transcription elongation factor n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPW8_9ACTO Length = 166 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 7/157 (4%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 ++ ++L+ ELD L + RP I A I RE GDL+EN YHAARE+QG EGRI Sbjct: 11 TWLSQDAHDRLQAELDELIAN-RPAIAAEINARREEGDLRENGGYHAAREEQGKQEGRIL 69 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--LIS 121 ++ L AQV + P+ V G VT+ D ++ ++G E + S Sbjct: 70 YLKELLRTAQVGEA---PSADTVSPGMVVTIYFDDDTDDTETFLLGSREISSTTELTVYS 126 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 S + + ++G V P G +++ V++ E Sbjct: 127 PESALGKSILGTRPGQTVTYTAPSGADIKVTVVRFEP 163 >UniRef50_C6WVB7 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae RepID=C6WVB7_METML Length = 168 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T GA EL L+ E+ LK A+ A+++ E + Sbjct: 28 PNYVTPSGAL----ELQTLEESLVAELNR----------LKLTADDTFAKDKVAEIERDL 73 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + A+L +A ++D TK + V+FGAT+ V + + + T+ IVG+DEAD N +S Sbjct: 74 RYVRARLDSAILVDPTKQSHE-TVLFGATIEVED-GAGAQHTFHIVGEDEADASINKVSW 131 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ L+G++ D V + P G + E++ + Y Sbjct: 132 VSPLAKSLLGQKVGDTVTWQRPAGNINLEILDIHY 166 >UniRef50_C6X3W9 Transcription elongation factor GreB n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X3W9_FLAB3 Length = 183 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 16/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G E L++E L S + E D EY A R+ Sbjct: 45 ENWVTPAGMEALQQERADLISEQ------------EKLDPSHEREYRIA---FNHLNARL 89 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + ++++A++ID ++ G V FGATVT NL+++ QT+++VG DEA+ + ++ Sbjct: 90 QLLNGRMASAKIIDTARLSQ-GEVHFGATVTFKNLNNNLRQTFQLVGVDEANISKGKLAF 148 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +P+A+ LI + + V ++ FE++ + Y Sbjct: 149 TTPLAKALINSKVGEKVTLQLGDKTNIFEILSIGY 183 >UniRef50_C4L6P4 GreA/GreB family elongation factor n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L6P4_EXISA Length = 152 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 5/157 (3%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M+ +T G +L + L L+ R + + AR+ D +E+ Y A Q E Sbjct: 1 MKPK-LTETGHHQLTDRLVMLR-RERTDARERLRTARKFCDFREDVTYTEAVRQYERIEA 58 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 I ++ L +A +++ + + V FG V + + +E + YRIV + EAD ++ I Sbjct: 59 DILELNHLLDDATIVESVQ---SEVVTFGNRVVIREVQQEETERYRIVSEAEADLERGSI 115 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SV SP+ R L+G + ++TPGG ++ EV+ +E Sbjct: 116 SVTSPLGRRLMGATMGQTIQVETPGGTIQVEVLHIEP 152 >UniRef50_B1ZQE9 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQE9_OPITP Length = 166 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 15/154 (9%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T GAE+L EEL+ L++V RP + A A+ A+ + + R Sbjct: 28 KRYLTEAGAERLHEELNRLRTVERPALAGAAAD-------------LDAKRELRKLDERA 74 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 ++++ L+ A++I + P+ V FGA VTV D TYRIVG DE +F IS Sbjct: 75 RELQQILATAEII-SSPAPDRSIVRFGAKVTVKEED-GTTSTYRIVGIDETEFYTGGISF 132 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+A+ L+G D + ++P G + E+ +E Sbjct: 133 QSPLAQALLGASVGDRIQFQSPAGPRQLEIQLIE 166 >UniRef50_Q5SJG6 Anti-cleavage anti-GreA transcription factor Gfh1 n=6 Tax=Thermaceae RepID=Q5SJG6_THET8 Length = 156 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G E+L ++L+ + R E + E E D +++ AA++++ E R Sbjct: 3 REVKLTKAGYERLMQQLER-ERERLQEATKILQELMESSDDYDDSGLEAAKQEKARIEAR 61 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ--NL 119 I +E LS A +++ + + G+ V + + S E + ++V EA+ Sbjct: 62 IDSLEDILSRAVILEEG---SGEVIGLGSVVELEDPLSGERLSVQVVSPAEANVLDTPMK 118 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 IS SP+ + L+G DV+ + TP G EF V+ + Sbjct: 119 ISDASPMGKALLGHRVGDVLSLDTPKGRREFRVVAI 154 >UniRef50_Q848L1 GreA n=1 Tax=uncultured bacterium RepID=Q848L1_9BACT Length = 597 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 15/153 (9%) Query: 5 PMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD 64 MT GAE+ R L L RR E++A+ + DL E R + E + Sbjct: 459 YMTAAGAERYRRRLQQLVQ-RRDELLASPDD-----DLPE-------RSELATLERELAQ 505 Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + A L A VI + P + V FGA V V + D +++VG++EA ++ L++ S Sbjct: 506 VSAVLQGAIVIRLASPPRD-EVRFGAEVVVED-DRGSRSRFQLVGENEAAPERGLVNWFS 563 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+ R L G V TP G + V ++ Y Sbjct: 564 PLGRALAGARLGQRVEWTTPAGRGAYVVREISY 596 >UniRef50_B5EI69 GreA/GreB family elongation factor n=6 Tax=Desulfuromonadales RepID=B5EI69_GEOBB Length = 143 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 1/115 (0%) Query: 43 KENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE 102 + A AR Q +K++ +L A+V+D +P + + + V + +LDS+EE Sbjct: 20 RLEALIDKARSTQTRDSKNLKELGEELVRAEVVDPAGIPPD-VITMNSKVCLQDLDSEEE 78 Query: 103 QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 Y +V +EAD IS+ +P+ +IG D + PGG +V K+ Y Sbjct: 79 LVYTLVFPNEADLASGKISILAPVGTAMIGFRTGDRITWPVPGGMKNLKVKKILY 133 >UniRef50_B4UMG4 GreA/GreB family elongation factor n=4 Tax=Anaeromyxobacter RepID=B4UMG4_ANASK Length = 169 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 17/155 (10%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T G LRE L L++ R +A D + A + G + R Sbjct: 27 EVRYVTPEGQAALREALARLRADR--------GDAARLPDAERPA-------RLGELDAR 71 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++A L V+ P G+V FG VTV D T+R+VG DEAD ++ LIS Sbjct: 72 IAALDATLGALTVLGPEATP-EGQVGFGTWVTVEEED-GRRVTWRLVGPDEADARRGLIS 129 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+AR L+G+ DVV + PGGE E V+ V Sbjct: 130 AGSPVARALLGRRAGDVVEVNRPGGEAELTVVAVR 164 >UniRef50_B4D5K0 GreA/GreB family elongation factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5K0_9BACT Length = 169 Score = 111 bits (278), Expect = 7e-24, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 MT+ GAE+L++EL L A + L+E E +R++ R+ Sbjct: 29 RNRMTVDGAERLQKELAVL--------------ADQKAQLEETGEGEISRDELRRVTSRM 74 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + +L++A+VI +++ V FG VT+ + E YRIVG DE D + IS Sbjct: 75 QALSQRLADAEVIAISE-SRGDEVRFGMFVTIRD-AGGVEDEYRIVGVDEVDLEAGWISW 132 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ ++G++ DVV + P GE + ++ V Sbjct: 133 LSPLAQAIVGRKIGDVVQFQAPAGEKKLHIVAVRP 167 >UniRef50_D2QK34 GreA/GreB family elongation factor n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QK34_9SPHI Length = 171 Score = 111 bits (278), Expect = 7e-24, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 15/157 (9%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 +T RG LR+E + L+ A L + E Q G+ Sbjct: 27 SVNYVTPRGLAMLRDEFEKLEKE----------HALAQTQLTDENE---RTRQLALLNGQ 73 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDE-EQTYRIVGDDEADFKQNLI 120 I + +++ A+V+++ P + V FGATVT+ + + + +Q IVG DEAD I Sbjct: 74 IAALNQRIATAKVVNMQDHPLD-EVRFGATVTLSSQSTGKADQQLTIVGVDEADAIHGRI 132 Query: 121 SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 + +PIAR L+GK+ D + ++TP GE E+ + Y Sbjct: 133 AFPAPIARLLLGKKVGDFITLRTPRGENALEITSIYY 169 >UniRef50_A3HZU2 Transcription elongation factor GreB n=2 Tax=Bacteroidetes RepID=A3HZU2_9SPHI Length = 166 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 16/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G E+L+ E L + A E R F +I Sbjct: 28 TNYVTETGMEELQAEKQALIEEKSNLTAATEQEKRIAS---------------NFISAKI 72 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 K ++ +++ A+++D+++ P N + FGA VT+ S + TY++VG DEAD +N IS Sbjct: 73 KLLDERIATAKIVDLSEQPKN-EIRFGAKVTLKIGKSPKAMTYQLVGVDEADISKNKISF 131 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SPIA LIGK+ + + G+ FEV++++Y Sbjct: 132 ISPIAMILIGKKVGEKATLSLTKGDRVFEVMEIKY 166 >UniRef50_Q0PQI1 Transcription elongation factor (Fragment) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQI1_9GAMM Length = 166 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 3/128 (2%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 ++ +T G ++L E L RR E++ A++ A GD ENAEY +++ + R Sbjct: 35 KSPYITSDGHQRLLAEEQGLWKRRR-EVVKALSAAAAEGDRSENAEYIYRKKELREIDRR 93 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+ ++ ++ +V++ N +V F A VT+ + YRIVG DE D + + IS Sbjct: 94 IRYLQKRIPELKVVE-QPPSNRQQVFFAAWVTLEDEQ-GVTHRYRIVGPDEIDHQADYIS 151 Query: 122 VNSPIARG 129 ++SP+ G Sbjct: 152 MDSPLGAG 159 >UniRef50_Q11P04 Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11P04_CYTH3 Length = 149 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L ++++ ++P N V + VT++ +DS++ +++V D+AD K N IS+ S Sbjct: 48 LMNELKLGKLVEPEEIP-NNVVTMHSIVTIVFMDSNKRVEFQLVYPDKADVKNNKISIFS 106 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 PIA LIG + D + P G + ++ + Y Sbjct: 107 PIATALIGYQIGDEIEWCVPAGMTKIKIESIAY 139 >UniRef50_Q1CX76 Transcription elongation factor, GreA/GreB family n=2 Tax=Cystobacterineae RepID=Q1CX76_MYXXD Length = 167 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 21/158 (13%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHA--AREQQGFCE 59 + +T G L+EEL A G + E+ A ++ E Sbjct: 26 EKRYITPEGYRALQEEL-----------------AAAQGPDPKAGEFTELEAGVRRKERE 68 Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 R++++ A L + +V++ GRV FGA V + + D + YRIVG DE+D K Sbjct: 69 RRVQELAAVLEDVRVVEP-DASQAGRVFFGAWVELEDEDGGPVR-YRIVGPDESDVKAGR 126 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +SV SP+AR L+GKE + VV+ P G VE+ V V+Y Sbjct: 127 LSVESPLARALLGKEVGESVVVDRPRGPVEYTVTAVDY 164 >UniRef50_Q1IXC6 GreA/GreB family elongation factor n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IXC6_DEIGD Length = 158 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 5/157 (3%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + IPMT G +L+E L+ + + A + DL E+ + AA+ E R Sbjct: 3 EEIPMTAEGYRRLQETLEKERQRLEDATTSMAATLDDAMDL-EDRSFQAAQYDLPTMEAR 61 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--- 118 I ++E L+ A +++ + +G V G+ V + + D E ++V E D Sbjct: 62 ILELEDVLARAVIVEEPQ-ARDGGVALGSVVVLRDEQHDRELRVQLVSAVEVDALAEGAT 120 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +S +SP+ + L+G+ + + + V + Sbjct: 121 QVSEDSPVGKALLGRRAGESFEVDLGSSRARYTVKSI 157 >UniRef50_A0M1N1 GreA-like transcription elongation factor n=3 Tax=Flavobacteriaceae RepID=A0M1N1_GRAFK Length = 166 Score = 108 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 16/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G +L++EL L+ R E R Q +G+I Sbjct: 28 TNYVTPNGLAELKQELKDLEYERA---------------HVEAENDTEKRRAQSLIDGKI 72 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + +L A+++D P + + FGA V + N S + Q ++IVG DEAD K+ I+ Sbjct: 73 NLLSERLQTARLLDSKDQPKD-EIRFGARVKLTNETSGQLQEFQIVGVDEADIKKKKIAF 131 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +PIA+ + G++ + + K + +V+ + Y Sbjct: 132 VAPIAKAVTGRKVGEEIDFKLGNEIRKLKVLGITY 166 >UniRef50_C8S319 GreA/GreB family elongation factor n=1 Tax=Rhodobacter sp. SW2 RepID=C8S319_9RHOB Length = 167 Score = 108 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 17/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T RG L+ L EA+ + + E I Sbjct: 25 PNYVTPRGLALLQTRLA---------------EAQARLAALRARPERLDKLPEAAAERDI 69 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + +EA+L +A +D + P G V FGA V V L Q ++I G+DEAD QN I+ Sbjct: 70 RYLEARLRSAIPVDPSSQPA-GEVAFGARVEVA-LADGSRQVWQITGEDEADATQNRIAP 127 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+AR L+G E D+V+ + P G VE EV+ + Y Sbjct: 128 QSPLARALLGAEVGDLVIWRKPSGPVELEVLAIAY 162 >UniRef50_Q9RRW0 Transcription elongation factor n=1 Tax=Deinococcus radiodurans RepID=Q9RRW0_DEIRA Length = 183 Score = 108 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 8/160 (5%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +P+T G +L+ L+ + RR E + E E + E+ + AA+E G E R Sbjct: 26 QPLPLTPEGLSRLQAALER-EQARREEARRVVQEQMEANE-NESLDLAAAQETLGAVEAR 83 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--- 118 I+++E +L+ A V+ N+GR G+ VT+LN+ E +V EA Sbjct: 84 IEELEDQLARAVVLAPGA-GNDGRAAVGSRVTLLNIGLGRELPLHLVSAAEAAAGPGTSG 142 Query: 119 --LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 L+S SP+ R L+G+ + + + ++ V+ VE Sbjct: 143 VALVSTESPVGRALLGRRAGEEFTVDLGRTQAQYRVLMVE 182 >UniRef50_Q1H3Z9 GreA/GreB family elongation factor n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Z9_METFK Length = 138 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 1/96 (1%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + +E +L+ ++ + ++ V + V + + + E + +V +AD N IS Sbjct: 34 LARLEDELARSEEV-PSEQVGADVVTMNSRVLLRDEANGHEMSCTLVFPSDADASANRIS 92 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V +P+ ++G DV+ PGG ++ ++K++Y Sbjct: 93 VVAPLGTAILGYRVGDVIDWAMPGGVRQYRILKIDY 128 >UniRef50_C1ABM5 Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABM5_GEMAT Length = 161 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 1/151 (0%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 M ++ E++ L+ + I +A E GDLKEN+EY AA E+Q F + R+ + Sbjct: 1 MFQELIAQMAREVEKLQFELNVTLPNEIRKAVELGDLKENSEYKAALERQQFVQARLGQL 60 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSP 125 +++ ID+T++P + RV G+ V V +L S +TY +V D + +++ SP Sbjct: 61 TQRVTKLANIDITQIPGD-RVGLGSKVIVEDLQSKARETYELVFGDAGELHDGHVTMGSP 119 Query: 126 IARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 I R L GK + ++K P + ++++++ Sbjct: 120 IGRALQGKSVGEEAILKLPTRIRKLQIVELQ 150 >UniRef50_C5S652 GreA/GreB family elongation factor n=2 Tax=Proteobacteria RepID=C5S652_CHRVI Length = 171 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + ++EA+L+ A+V+D +MP N V +TV + ++E T +V + D IS Sbjct: 66 MDELEAELARAEVVDPREMPPN-VVSMNSTVRFRVMSTNEAFTLTLVYPKDMDASGGKIS 124 Query: 122 VNSPIARGLIGKEEDDVVVIKTP-GGEVEFEVIKVEY 157 + +P+ L+G D + P GG + + +V Y Sbjct: 125 ILAPVGSALLGLSSGDEIEWPKPGGGVLRVRIEEVTY 161 >UniRef50_A0LL17 GreA/GreB family elongation factor n=3 Tax=Bacteria RepID=A0LL17_SYNFM Length = 141 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 ++ +E +L A+V+ +P + V + V V +LD+ E Y +V EAD KQN Sbjct: 35 KHLQVLEEELRKAEVVAARNIPRD-TVTMNSKVRVKDLDTGIETIYHLVFPGEADVKQNR 93 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 ISV +PI LIG DV+ P G + + ++ Y Sbjct: 94 ISVLAPIGTALIGYAVGDVIQWNVPAGTKKLRIEEILY 131 >UniRef50_Q3BX42 Regulator of nucleoside diphosphate kinase n=9 Tax=Gammaproteobacteria RepID=Q3BX42_XANC5 Length = 146 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L A+V+ ++P + V + + + E T +V EAD + ISV + Sbjct: 41 LSDELGRARVLPPDQIPGD-VVTMHSRIECEDQLHGERHTLTLVYPHEADVQHGRISVLA 99 Query: 125 PIARGLIGKEEDDVVVIKTPGG-EVEFEVIKV 155 P+ L+G + +TP G ++ V V Sbjct: 100 PVGSALLGLSVGQSIDWRTPDGRDLRLRVTAV 131 >UniRef50_Q2LTP9 Transcription elongation factor n=2 Tax=Deltaproteobacteria RepID=Q2LTP9_SYNAS Length = 134 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 39/160 (24%) Query: 1 MQA--IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFC 58 M I +T + E+L + L+ K Sbjct: 1 MNKRRIYVTEQDMERLEDLLETSKKSE--------------------------------- 27 Query: 59 EGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN 118 + +EA+L NA V+ +MP + V + V +L + +T +V +A+ Sbjct: 28 --YARSLEAELVNAVVVPSEEMPPD-VVTMNSCVCFEDLTTGNRETITLVYPGQANMASG 84 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 +SV +P+ LIG + P G + +++V Y Sbjct: 85 RVSVLAPVGSALIGLSVGQTIEWPMPNGRKRRLRIVEVLY 124 >UniRef50_Q97HP4 Transcription elongation factor n=1 Tax=Clostridium acetobutylicum RepID=Q97HP4_CLOAB Length = 158 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 6/145 (4%) Query: 6 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 65 +T +KL+EE ++ +V+R EI EA GD ENAEY AA+E+ R+ I Sbjct: 5 LTKSDYDKLKEEYEYRNTVKRHEIAKKKMEAAAFGDRSENAEYKAAKEEYYHNNRRLGQI 64 Query: 66 EAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEA---DFKQNLISV 122 L NA +++ K+ + V G+ + + + +DE ++V D ISV Sbjct: 65 SRLLKNAIIVEEDKI--DDEVNIGSEMLLK-IGADETFKAKLVTTLNISVEDEDIEYISV 121 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGE 147 +SP + L K D + + P Sbjct: 122 DSPFGKALYKKHVGDSIDVNLPDNR 146 >UniRef50_Q88Q22 Transcription elongation factor, putative n=11 Tax=Pseudomonas RepID=Q88Q22_PSEPK Length = 165 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 18/154 (11%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q +T G +L+ + L + + + E GD +++ E Sbjct: 26 QPNYVTASGLRQLQTRVAEL-----NALRSELQAQGERGD----------KQRLADTERD 70 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ A++ +AQV+ ++ +V G+ V ++ +EQ ++VG+DEAD LI+ Sbjct: 71 LRYFSARVQSAQVVPAA--TSHSKVQIGSRVRFVDAQD-QEQVVQLVGEDEADAGHGLIN 127 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+ R L+G D VV + P GE EV+++ Sbjct: 128 WGSPLGRALLGAGPGDEVVWRRPVGEQVIEVVEI 161 >UniRef50_C6VSR5 GreA/GreB family elongation factor n=2 Tax=Sphingobacteriales RepID=C6VSR5_DYAFD Length = 134 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L+ A V++ ++P G + + V V +++E + IV +AD + IS+ + Sbjct: 36 LAYELNRAVVVEDNELPA-GSIRLNSYVKVRETTTNKEMAFSIVMPKDADIAKQRISILT 94 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+ LIG + + V K P G F+++ V Y Sbjct: 95 PMGAALIGLCKGETVEWKMPAGIRRFKILDVWY 127 >UniRef50_A9GAI2 Regulator of nucleoside diphosphate kinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GAI2_SORC5 Length = 140 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 31/156 (19%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 I +T ++L L+ L+ AR GD Sbjct: 6 NPIVLTEFDRDRLARLLEALR-------------ARPGGDSPN----------------- 35 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ +E ++ A V+ +P N V + V +++LD++E +V AD K IS Sbjct: 36 LEALEIEIERADVVKPADIPPN-VVTMNSRVELVDLDTEERLCVTVVFPGNADVKSGRIS 94 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V +P+ L+G E D V TP + ++ Y Sbjct: 95 VLAPMGLALLGCREADEVEWPTPSRTRRLRIERIAY 130 >UniRef50_B6BTF1 GreA/GreB family elongation factor n=2 Tax=Betaproteobacteria RepID=B6BTF1_9PROT Length = 164 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 17/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G ++L+E + +++ I +E D EN ++ + E + Sbjct: 27 PNYVTPNGHKQLKETIHLIET--------EIKSIKELEDSPEN------KQNKMKLERDL 72 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + A +ID K N +V+FGA V +++ + E ++IVG+DEAD KQN +S Sbjct: 73 RYYLKRFETAILID--KHEENNKVLFGAHVILIDEND-EAYKFQIVGEDEADIKQNKLSY 129 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 SP+A+ LIG D VV K G + + Y Sbjct: 130 VSPLAKELIGSLIGDEVVWKRADGNRVVFIDSINY 164 >UniRef50_C6UNA6 Putative transcription elongation factor GreA n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UNA6_HODCD Length = 155 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 3/141 (2%) Query: 1 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG 60 M A +T G L +L++ + ++P + A + AR GDL ENA+Y AAR + E Sbjct: 1 MAATTLTALGYISLVAQLNWRRQHKKPALKAQLKAARSLGDLSENADYQAARREDKLNEA 60 Query: 61 RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI 120 RI +I L+ A++ R + +TV + D + + IVGDDEA + + Sbjct: 61 RINEILQTLARAKL--APARSAANRPSYNSTVVLKRAD-GKLLAFNIVGDDEAIATEANV 117 Query: 121 SVNSPIARGLIGKEEDDVVVI 141 ++S +AR + K+ DVVV+ Sbjct: 118 GLSSDVARQCLNKKVGDVVVV 138 >UniRef50_B3PF63 Regulator of nucleoside diphosphate kinase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF63_CELJU Length = 180 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 13/141 (9%) Query: 18 LDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKD-IEAKLSNAQVID 76 L+ LK V E I+ N++Y + + + ++ ++ A ++ Sbjct: 48 LEKLKMVATTETSLVIS----------NSDYQRLVQLIEDNDSPAAEALDIEIGRATLVA 97 Query: 77 VTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEED 136 ++P + V + VT +LDS E++T ++V +A+ Q IS+ SP+ LIG Sbjct: 98 DAQLPAD-VVAMDSEVTFEDLDSGEQKTIQLVFPAQANVDQLKISILSPVGSALIGLRIG 156 Query: 137 DVVVIKTPGGE-VEFEVIKVE 156 + P G+ +VI V+ Sbjct: 157 SSIDWPVPQGKVRRLKVIAVK 177 >UniRef50_B8G0E1 GreA/GreB family elongation factor n=2 Tax=Desulfitobacterium hafniense RepID=B8G0E1_DESHD Length = 138 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 1/102 (0%) Query: 56 GFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADF 115 + +KD+E +L+ A V+ K+P N + + + + +L++ EE Y +V ++AD Sbjct: 28 AKNKDYLKDLEHELNGADVVPSEKIPGNA-ITMNSRILLKDLETGEETVYTLVYPEDADL 86 Query: 116 KQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 ++ IS+ +P+ ++G E D++ K PGG V F+V K+ Y Sbjct: 87 LEDKISILAPVGTAILGYLEGDIIDWKVPGGVVRFKVEKILY 128 >UniRef50_C6B1R3 GreA/GreB family elongation factor n=16 Tax=cellular organisms RepID=C6B1R3_RHILS Length = 160 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 67/155 (43%), Gaps = 23/155 (14%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR- 61 +T G + L +ARE D E R +Q R Sbjct: 28 PNLVTEAGLKALE---------------LQFQQAREAYDAASPIEDVNERRRQAASPLRD 72 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ + A+L AQ++ + V FG+TVT D QTYRIVG+DEAD K IS Sbjct: 73 LRYLTARLRTAQLMPS--PTSIDTVAFGSTVTFRR-DDGRVQTYRIVGEDEADPKAGSIS 129 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+AR L+GK D+V G E E+I + Sbjct: 130 YVSPVARLLMGKAVGDMVE----TGGQELEIIAIA 160 >UniRef50_B0SEQ9 Transcription elongation factor n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEQ9_LEPBA Length = 138 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Query: 54 QQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEA 113 ++ + ++D+ ++ AQ +D ++P+N V + + + NL+ E + +R+V +++ Sbjct: 26 KRNKTDANVQDLLGEIERAQKVDSKQIPSN-VVTMNSVIEIKNLEGIEFKEFRLVYPEDS 84 Query: 114 DFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 + QN IS+ +PIA IG + DV+ P G F++ +++Y Sbjct: 85 NLDQNQISILAPIATASIGYKTGDVIFWNVPDGVYRFQITEIKY 128 >UniRef50_Q1IZY0 GreA/GreB family elongation factor n=4 Tax=Deinococci RepID=Q1IZY0_DEIGD Length = 162 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 7/160 (4%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + + +T G E+L+ L + R E + E E E+ A+ ++ E R Sbjct: 6 RQVRLTREGFERLQRTLAQ-EQARLAEATRILQEQMETSADNEDTGLEDAKREKLNIEAR 64 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--- 118 I+++E L+ A +I+ N GRV GA VT+ N + + ++V EA Sbjct: 65 IEELEDTLARATLIE--DHENAGRVELGAVVTLNNETTKQTMRVQVVSAPEATVLGGSLP 122 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVEY 157 IS SP+ R L+G+++D+ V+ G+ ++ V +EY Sbjct: 123 RISEESPVGRQLMGRKKDETFVVNLENGKQVKYRVQDIEY 162 >UniRef50_C0JZV3 Transcription elongation factor GreA n=1 Tax=uncultured bacterium URE4 RepID=C0JZV3_9BACT Length = 112 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 67/103 (65%), Gaps = 1/103 (0%) Query: 54 QQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEA 113 +QG E +I ++ K++NA+VID +K+ + V + VTV N+++ + ++IVG+ EA Sbjct: 10 RQGLLEVKIARLKEKVANARVIDESKLSAD-TVQLLSKVTVENMNAKMKMQFQIVGESEA 68 Query: 114 DFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 DF + L+S ++PI + L+G + +VV K P G ++F+++ + Sbjct: 69 DFSKGLLSASTPIGKALMGHGKGEVVEAKVPSGIMKFKILDIS 111 >UniRef50_B8GS58 GreA/GreB family elongation factor n=22 Tax=Proteobacteria RepID=B8GS58_THISH Length = 137 Score = 99.2 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 6/118 (5%) Query: 41 DLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSD 100 D E+ RE + + A+L A V++ +++P V + V Sbjct: 15 DRLEHLLDSLPREALANH----RQLLAELERANVVEPSQVPPT-LVTMNSRVRFRVEPEG 69 Query: 101 EEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTP-GGEVEFEVIKVEY 157 E +V D + ISV +PI L+G D + TP GGE+ ++++ Y Sbjct: 70 REFQRTLVYPSGMDGDEEKISVLAPIGSALLGLSVGDSIAWPTPKGGEMNVRIMEILY 127 >UniRef50_C0A6F4 GreA/GreB family elongation factor n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6F4_9BACT Length = 148 Score = 99.2 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 49/93 (52%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + + A+ A +I+ +G V V + +LD++E +TY + + AD + + IS Sbjct: 34 LARLRAEFDRALIIEDDTAMPDGVVTLHCEVRLQDLDTNEIETYTLTLPEHADPEAHRIS 93 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 + +PI L+G + D+VV + PGG +++ Sbjct: 94 ILAPIGTALLGYQVDNVVTWEMPGGARRLRILE 126 >UniRef50_A6VVR5 GreA/GreB family elongation factor n=15 Tax=Proteobacteria RepID=A6VVR5_MARMS Length = 137 Score = 99.2 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 D++ +++ A++++ MP + V +TVT L S++E + +V +A+ ++ +SV Sbjct: 33 DDLQEEINRAEIVEPRDMP-DNIVTMNSTVTFKVLSSEKEFSKTLVYPKDANGAEDTVSV 91 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 +P+ L+G +E D + P G+ + ++KV+Y Sbjct: 92 LAPVGSALLGLKEGDQIDWPKPNGDVLSVVIMKVDY 127 >UniRef50_B1ZU20 GreA/GreB family elongation factor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZU20_OPITP Length = 143 Score = 98.4 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 1/94 (1%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 + ++LS V+D T +P + G+TV + +L+S E +TY +V ++A+ +SV Sbjct: 31 QLRSELSRGVVVDATALPPTA-IRLGSTVEIEDLESGEIETYTLVLPEQANVDARKLSVL 89 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +PI +IG + V TPGG + +V Sbjct: 90 APIGTAVIGCLQGAEVAWSTPGGTRRLRIGRVSP 123 >UniRef50_C6X5Q8 Transcription elongation factor n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5Q8_FLAB3 Length = 170 Score = 98.1 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 51/112 (45%), Gaps = 1/112 (0%) Query: 46 AEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTY 105 A++ + + +L +A++++ +P + V + V + ++ + Sbjct: 50 KSIMDAKKNNSIKAEDAERLLRELHSAKIVESADIPAD-VVTMNSVVKIHFENNKTVTEF 108 Query: 106 RIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +IV ++A+ K IS+ SP+A LIG +D + P G + + ++ Y Sbjct: 109 KIVYPEQANIKDRKISIFSPVAAALIGYSVNDEIDWIVPSGMTKIIIDEIIY 160 >UniRef50_A5VGM9 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VGM9_SPHWW Length = 137 Score = 98.1 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 10/136 (7%) Query: 22 KSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMP 81 K+ RRP I +EA DL +A + Q E +L A + ++P Sbjct: 5 KAARRPPIHMIDSEADILADLATSAATRLPQVSQLLLE--------ELGRATIHKADRIP 56 Query: 82 NNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVI 141 + V + V + S +E Y++V +AD + IS+ +P+ GLIG ++ Sbjct: 57 GD-IVTMHSVVQFTDAASGKEHRYQLVYPKDADIAEGRISILTPVGAGLIGLRAGQSILW 115 Query: 142 KTPGG-EVEFEVIKVE 156 G E + KV Sbjct: 116 PDRDGHERLLTIAKVS 131 >UniRef50_C1CW74 Putative transcription elongation factor n=1 Tax=Deinococcus deserti VCD115 RepID=C1CW74_DEIDV Length = 162 Score = 98.1 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 7/157 (4%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAR--EQQGFCEGR 61 + +T G E+L + L+ + I + + DL EN +AA+ +++ E R Sbjct: 5 VQLTREGYERLEQSLEKERQRLEETITSLANTVDDAMDL-ENRSLNAAQIGQERIAIEAR 63 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQN--- 118 I ++E L+ A +++ +P G+V G+ V + + + ++V E Sbjct: 64 ILELEDVLARAVIVEEEDLPR-GQVAVGSVVMLEDDKHGRQLQVQLVSAVEISAMTEGVT 122 Query: 119 LISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +S +SP+ + L+G+ E + ++ G V++ V V Sbjct: 123 QVSDDSPVGKALMGRREGETFDVELEAGRVQYTVRSV 159 >UniRef50_B9MBQ3 GreA/GreB family elongation factor n=6 Tax=Betaproteobacteria RepID=B9MBQ3_DIAST Length = 135 Score = 98.1 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +EA+L A V D MP N V +TV L++ + T +V E D + +SV + Sbjct: 34 LEAELDRADVFDPKDMPPN-VVTMNSTVRFTLLETGKTNTLTLVYPKEMDGSGDKVSVFA 92 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 P+ L+G D + +P G+V V +++ Sbjct: 93 PVGIALLGLGVGDEFQMPSPTGQVTVRVDAIDF 125 >UniRef50_A6X2G5 GreA/GreB family elongation factor n=2 Tax=Ochrobactrum RepID=A6X2G5_OCHA4 Length = 156 Score = 97.7 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 24/154 (15%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G + +E+ L+ +A A + Sbjct: 25 RNLVTPTGLTMIEDEIARLQRELADANVAGERSAI------------------ARISRDL 66 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + NA++ +P++ V FG TV + NLD + + + IVG+DEAD IS Sbjct: 67 RYWTTRRENAELSVP--VPDSDVVRFGMTVELENLDDGKVRRWTIVGEDEADPSNGKISH 124 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 +P+A L GK DVV I VE+E++ ++ Sbjct: 125 VAPVAILLFGKPVGDVVKIN----NVEWEIVSLK 154 >UniRef50_B1I1G7 GreA/GreB family elongation factor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G7_DESAP Length = 154 Score = 97.7 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 8/158 (5%) Query: 1 MQAIP-MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCE 59 M +I ++ + +L +++ + + A G E + F + Sbjct: 1 MASIIELSNHAYKYFTGQLAQMEAQKL-ALFEDFFTAYAPG-----VPIDDRTEVRLFLD 54 Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 + + L+ A+V++ + P + G + V +LD + +R+V E + Sbjct: 55 DYLNRVRELLARARVVE-GQCPPLPLTLIGCDIRVEDLDRGHSEMFRVVSPYEINPAAGH 113 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +S SP+ RGL+ KE V+ ++ PGG + V+ V Y Sbjct: 114 VSFLSPVGRGLLLKEPGQVLAVQAPGGTFRYRVVSVTY 151 >UniRef50_Q3SU57 GreA/GreB family elongation factor n=9 Tax=Bradyrhizobiaceae RepID=Q3SU57_NITWN Length = 151 Score = 97.7 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 53/148 (35%), Gaps = 18/148 (12%) Query: 18 LDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDV 77 LD LK P I + + L E A + + ++ A++I Sbjct: 2 LDNLKKTHLPAIAISAHDIDRLRHLAEAAIEKYPATAE--------FLAREIDRAEIIPA 53 Query: 78 TKMPNNGR---------VIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIAR 128 + V + VT ++ S +++ +V ++AD IS+ SPI Sbjct: 54 DGSLLDDTRDQRWKVNLVTMQSEVTFIDDVSGQKRRVTLVYPEDADVDAGKISILSPIGA 113 Query: 129 GLIGKEEDDVVVIKTPGGE-VEFEVIKV 155 LIG + +TP G VI V Sbjct: 114 ALIGLSAGQSIEFQTPSGGWRSLTVIAV 141 >UniRef50_A6EIL5 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIL5_9SPHI Length = 129 Score = 97.7 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + A+LS A ++ + P++ + +TV + + + E IV A+ K+ ISV + Sbjct: 35 LSAELSRAVILSNEEFPSDA-IRLNSTVRIQDESTGEIMELIIVLPQHANIKEKKISVLT 93 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 PIA LIG + D V K P G F + +V Sbjct: 94 PIAAALIGFRQGDAVQWKVPAGLKNFRITEVA 125 >UniRef50_Q6MQZ8 Regulator of nucleoside diphosphate kinase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQZ8_BDEBA Length = 138 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 +E +LS A VI ++P N V + V L+ S +E +V +A ++ +S+ + Sbjct: 36 LEEELSRANVIAQKEIPKN-VVTMNSRVQFLDEVSGQESEMTLVYPQDAKLEEGRLSILA 94 Query: 125 PIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 P+ L+G + K P G+ + +V V Y Sbjct: 95 PVGIALLGLSVGQEINWKLPNGQSKKLKVQAVTY 128 >UniRef50_A1TEF4 GreA/GreB family elongation factor n=5 Tax=Actinomycetales RepID=A1TEF4_MYCVP Length = 159 Score = 96.9 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 17/156 (10%) Query: 4 IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIK 63 + MT + E L +EL L +V P + D + A +E RI+ Sbjct: 7 VWMTPQAREDLEKELADLMAVPNPAGTDETERTDQVVDA-----WLARKE-------RIR 54 Query: 64 DIEAKLSNAQVIDVTKMPNNGRVI-FGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 I LS A D + P + + G +TV D+ + +T+ + AD + + +V Sbjct: 55 QIHELLSRA---DHSTSPADDGIAEPGMVLTVRFDDTGDTETFLLGTRGTADPELEVYTV 111 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 SP+ L+G + + P G + V+ + Sbjct: 112 ASPLGSALLGAVPGEQRSFRLPNGSIQQVTVLAAKP 147 >UniRef50_Q5P744 Transcription elongation factor n=3 Tax=Proteobacteria RepID=Q5P744_AZOSE Length = 158 Score = 96.5 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 2/95 (2%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 + A+L A V+ +P V + V L+ S E++ ++V +EAD +SV Sbjct: 57 QLRAELERAVVVPPDFLPR-HVVTMHSRVRYLDEASGEQREIQVVYPEEADVAAGKVSVF 115 Query: 124 SPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 +P+ L+G D V+ P G V +V + Sbjct: 116 APVGAALLGLSVDQVIEWDFPRGPRRRLRVEEVLH 150 >UniRef50_B9NGJ6 Predicted protein n=12 Tax=cellular organisms RepID=B9NGJ6_POPTR Length = 145 Score = 96.1 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 2/94 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++A L A ++ +P + V + V + + + +V D+AD +SV S Sbjct: 43 LDALLERAAIVSPDAIPKD-VVTMNSRVVCALEGEAKPRDWTLVYPDDADLATGRLSVLS 101 Query: 125 PIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 PI + L+G D V + P G ++++ + Sbjct: 102 PIGQALLGARSGDTVDYRLPDGRAQRVTIVEIAF 135 >UniRef50_A6GQE5 Nucleoside diphosphate kinase regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GQE5_9BURK Length = 122 Score = 95.4 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++ A L NA+ I +P + V + T++ +S + +A+ + ISV Sbjct: 19 ELNAALDNAEFIKPQDIPAD-VVTMNSLFTIVETESGSTNKLMLCYPSDAEPAKGYISVL 77 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIK 154 SP+ L+G++ V TP GE F V+K Sbjct: 78 SPVGASLLGRKAGTVAQWATPNGEQHFAVVK 108 >UniRef50_B9J7D6 Transcription elongation factor protein n=52 Tax=Alphaproteobacteria RepID=B9J7D6_AGRRK Length = 160 Score = 94.6 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 67/154 (43%), Gaps = 21/154 (13%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 MT G + L +L AA A A D+ E R Q + Sbjct: 28 PNLMTEAGLKALELQLQQ--------ARAAYAAASTIEDVNE------RRRQAAGPLRDL 73 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + ++ AQ I + V FG+TVT D QTYRIVG+DEAD K IS Sbjct: 74 RYLAERIRTAQPIPAPA--SIDIVAFGSTVTFSR-DDGRVQTYRIVGEDEADPKTGSISF 130 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+A+ L+GK DV + G+ E E+I + Sbjct: 131 VSPVAKLLMGKSVGDVASV----GDQELEIIAIA 160 >UniRef50_Q7MD62 Transcription elongation factor n=10 Tax=Proteobacteria RepID=Q7MD62_VIBVY Length = 135 Score = 94.2 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 3/106 (2%) Query: 53 EQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE 112 E+ ++ +E +L A V+ +MP + V +TV + SD+ +V D+ Sbjct: 22 EKMANLSPELEKLENELDRANVLAPQQMP-DNIVTMNSTVRFTFVGSDKVMEKTLVYPDQ 80 Query: 113 ADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVEY 157 + +S+ +P+ L+G + PGG E E+++V Y Sbjct: 81 VRNPDD-VSIFAPVGSALLGLSVGQQLTWPMPGGAERTIEILEVTY 125 >UniRef50_A6C278 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C278_9PLAN Length = 137 Score = 94.2 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 52/93 (55%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + A+L+ A +++ ++P + V +TV + +L++DE +TY +V +A+ K+ +S+ + Sbjct: 37 LHAELAVAHIVESEEIPAD-IVTMNSTVRLRDLETDELETYTLVYPQDANIKEGKLSILT 95 Query: 125 PIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 PI ++G D + + G + V ++ + Sbjct: 96 PIGTAILGYRIGDQLRSRALAGGSKIRVEEILF 128 >UniRef50_Q83FN6 Transcription elongation factor n=3 Tax=Micrococcineae RepID=Q83FN6_TROWT Length = 172 Score = 93.8 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 ++ L EL+ L + R EI I +AR GDL+EN Y AA+E+Q EGR Sbjct: 15 SETWLSKEAHSVLVVELEELVTTGRKEIAKRIEQARSEGDLRENGGYSAAKEEQARIEGR 74 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL-- 119 I+ ++ L +A+V G V G VT E+ + ++G+ E +L Sbjct: 75 IQQLQDLLRHARVG--QAPKARGVVEPGVVVTARI--GGSERRF-LLGNREIAHTSSLAT 129 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 S +S I + ++G +E + K+P G ++ ++KVE Sbjct: 130 YSESSAIGQAILGLKEGSEIECKSPTGALIKVAILKVE 167 >UniRef50_A4CMB9 Nucleoside diphosphate kinase regulator n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CMB9_9FLAO Length = 139 Score = 93.8 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%) Query: 56 GFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADF 115 I+ + +L +A+++D +M N V F + +TV + ++ + ++V E D Sbjct: 29 ATLWQSIQKLLTELDSAKIVDEAEM-QNDVVRFHSIITVTS-ENGWSRRVQLVLPPERDV 86 Query: 116 KQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 ++ IS+ +P+ L G E D V + P G + KVE Sbjct: 87 SKDKISILTPMGIALFGYAEGDTVSWEFPSGPKRLRIEKVE 127 >UniRef50_Q3K4S3 Regulator of nucleoside diphosphate kinase n=2 Tax=Pseudomonas fluorescens RepID=Q3K4S3_PSEPF Length = 136 Score = 93.8 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 38/93 (40%), Gaps = 1/93 (1%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++ +L A + V + V S ++ +V A+ + +S+ + Sbjct: 33 LQTELDRADTLVGHDEVPADVVTMNSRVHCREESSGKDYHLTLVYPKHANADEGKVSILA 92 Query: 125 PIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 P+ L+G + + PGG ++ +++VE Sbjct: 93 PVGSALLGLKVGQHIDWPAPGGKTLKLTLLEVE 125 >UniRef50_Q74EX3 Nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74EX3_GEOSL Length = 135 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 60 GRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNL 119 ++ +E +L++A ++D +P N V + V + +L +D+E T +V ++A+ + Sbjct: 29 KDLQKLEDELASAMIVDPKDVPPN-VVTMNSRVKLRDLRADKEMTISLVFPNDANIAEGK 87 Query: 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 IS+ SPI ++G D + + + + +V Y Sbjct: 88 ISILSPIGTAILGFGAGDTLDLAVRSFAKKIRIEEVLY 125 >UniRef50_B4RDE4 Transcription elongation factor GreA/GreB, family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RDE4_PHEZH Length = 161 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%) Query: 37 REHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLN 96 R DL + Q + + A+ +NAQV++ P V FG VT Sbjct: 39 RALADLDQRIAGCEDEAQMAWLRRDQRYWAARRANAQVVESPADP--DEVAFGTRVTFR- 95 Query: 97 LDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 D +T +VG+DEA+ Q +S +P+AR +IG + V ++T + E++ VE Sbjct: 96 KDGGAPETVELVGEDEAEPAQGRLSWVAPLARAMIGAMPGETVELETRTPAIRLEILAVE 155 Query: 157 YL 158 + Sbjct: 156 PI 157 >UniRef50_B9KMW2 Transcription elongation factor n=3 Tax=Rhodobacter sphaeroides RepID=B9KMW2_RHOSK Length = 164 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 17/155 (10%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T RG L+ L ++ R R + E I Sbjct: 25 PNLVTPRGLADLQARLLATQARLRALRARE---------------DRLDRLPEAAAERDI 69 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + +EA++++A ++D P + V FG VTV + + I G+DEA I+ Sbjct: 70 RYLEARIASAILVDPAAQPLD-EVAFGLAVTVEDEA-GRRTVWEITGEDEAQATARRIAP 127 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 +P+AR L+G + VV P GEV V + + Sbjct: 128 QAPLARALMGARLGEKVVWTRPAGEVTLTVTGIAH 162 >UniRef50_C6WYK0 GreA/GreB family elongation factor n=2 Tax=Methylophilaceae RepID=C6WYK0_METML Length = 125 Score = 92.7 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +LS A V+ ++P + V + V L+ S + +V + AD K ISV S Sbjct: 26 LGDELSRAIVVPADQVPAD-VVRINSRVIYLDESSGLSREVELVFPEGADLKFGKISVLS 84 Query: 125 PIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVE 156 P+ L+G +E V+ P G+ +V+ V Sbjct: 85 PVGSALLGLKEGQVIDWPFPHGQSRRLKVVSVA 117 >UniRef50_C6XWY5 Transcription elongation factor GreA/GreB domain protein n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XWY5_PEDHD Length = 125 Score = 92.3 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 1/92 (1%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++A+L A + ++P++ V + + N+ + +E T+++V +EA+ K +SV Sbjct: 32 KLQAELKAATIYTEEELPSD-VVCLKSEARIANVKTGKEFTFKLVMPEEANIKAQKVSVF 90 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 +PI L G D + + P G EF++++V Sbjct: 91 APIGIALFGYRTGDSINWEMPDGIQEFKILEV 122 >UniRef50_Q1YFK5 Possible transcription elongation factor, GreA/GreB family n=2 Tax=Aurantimonadaceae RepID=Q1YFK5_MOBAS Length = 158 Score = 92.3 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 25/155 (16%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 + +T RG + E+ L + EA D + Sbjct: 25 EPNLVTPRGLSLIDAEIAALNERK---------EAARQADD---------KIAIANINRD 66 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 ++ A+ + A++I G FG+ V++ D Q + IVG DEAD LIS Sbjct: 67 LRYWNARRATAELIRPRDTG--GTAQFGSVVSIERED-GRTQQFTIVGIDEADPSAGLIS 123 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+AR LIG+ D+V G + E+I + Sbjct: 124 YLSPLARSLIGRTVGDIV----RAGTADAEIIAIS 154 >UniRef50_A5FHU8 GreA/GreB family elongation factor n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FHU8_FLAJ1 Length = 132 Score = 92.3 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Query: 52 REQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDD 111 + + + +L A + +++ ++ + + VT+ ++ ++++ +IV Sbjct: 21 KSKNSTNTKEANQLSQELDRAVISKESEL-DSSVIRINSLVTIEDVKANKQMKIQIVLPS 79 Query: 112 EADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 AD KQ+ IS+ +P++ +IG +E+D V + P G +++ V Sbjct: 80 YADVKQSKISILAPLSVAIIGFKENDEVDWELPAGIKTLKIVAV 123 >UniRef50_A4T6M8 GreA/GreB family elongation factor n=3 Tax=Mycobacterium RepID=A4T6M8_MYCGI Length = 157 Score = 92.3 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 24/161 (14%) Query: 1 MQA---IPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGF 57 MQ I M+ + E L +EL L + P + +A + A +E Sbjct: 1 MQPADTIWMSPQTRESLEQELAALMAAPGPAGSDEVVDA-----------WLARKE---- 45 Query: 58 CEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 RI+ I L+ A+ ++G G +TV D+ + +T+ + D + Sbjct: 46 ---RIRQIHELLTKAE--HAVDPADDGVAEPGMVLTVRFDDAGDTETFLLGTRATVDSEL 100 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPG-GEVEFEVIKVEY 157 ++ SVNSP+ L+G + P G + ++ + Sbjct: 101 DVYSVNSPMGSALLGATPGQQRSYQLPNGGTQQVTLLSAKP 141 >UniRef50_A9MBQ4 GreA/GreB family elongation factor n=36 Tax=Brucella RepID=A9MBQ4_BRUC2 Length = 169 Score = 92.3 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 3/106 (2%) Query: 51 AREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGD 110 A E +++ A+L A+V+ ++P N V G+TV + E+ +V Sbjct: 25 ASNASERFEEIAEELMAELDRAKVVTAKRIPEN-VVQMGSTVEFR-ANDGHERRVTLVYP 82 Query: 111 DEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKV 155 EAD +N IS+ +PI LIG + G+ E V+KV Sbjct: 83 GEADIAKNRISILTPIGTALIGLAPGQSISWTARDGKQHELNVLKV 128 >UniRef50_P0AFW6 Regulator of nucleoside diphosphate kinase n=155 Tax=Enterobacteriaceae RepID=RNK_ECO57 Length = 136 Score = 91.9 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 10/133 (7%) Query: 26 RPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGR 85 RP II +A L E Y + A+L AQ+ +MP++ Sbjct: 3 RPTIIINDLDAERIDILLEQPAYAGLPIADA--------LNAELDRAQMCSPEEMPHD-V 53 Query: 86 VIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPG 145 V + V NL E + +V + +SV +P+ L+G D + + PG Sbjct: 54 VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113 Query: 146 GEV-EFEVIKVEY 157 G EV+++EY Sbjct: 114 GVATHLEVLELEY 126 >UniRef50_A6X582 GreA/GreB family elongation factor n=3 Tax=Rhizobiales RepID=A6X582_OCHA4 Length = 142 Score = 91.5 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 3/107 (2%) Query: 51 AREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGD 110 A E +++ +L A+V+ ++P N + G+TV + + +E+ +V Sbjct: 25 ATNVSERLEEIAEELMVELDRAKVVPAKRLPQN-VIHMGSTVEFRS-NDGQERRVTLVYP 82 Query: 111 DEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVE 156 EAD Q IS+ +PI LIG + G+ E V+ V Sbjct: 83 GEADIAQGKISILTPIGTALIGLAPGQSISWTARDGKQHELNVLSVS 129 >UniRef50_B8IFL5 GreA/GreB family elongation factor n=8 Tax=Methylobacterium RepID=B8IFL5_METNO Length = 141 Score = 91.5 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 + +L AQ++ + V G V + + Q +V EA+ +Q ISV + Sbjct: 45 LADELDRAQIV-AGRGRLPPFVRMGCQVEFRDDTTGRVQIVTLVYPGEANIEQGKISVLT 103 Query: 125 PIARGLIGKEEDDVVVIKTPGG-EVEFEVIKVE 156 PI LIG + +T G V+ V Sbjct: 104 PIGAALIGLSTGQSITWETRSGLTKSLTVLDVR 136 >UniRef50_B0T2S8 GreA/GreB family elongation factor n=15 Tax=Alphaproteobacteria RepID=B0T2S8_CAUSK Length = 161 Score = 91.1 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 21/153 (13%) Query: 3 AIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRI 62 +T G ++ +EL AA + A+ GD+ ++ R + Sbjct: 27 PNLVTPGGLVRIEDELA--------AARAAYSAAQAGGDVAQD------RTAMARATRDL 72 Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + A+ ++AQ+ ++ P + FG +VT + + QT+RIVG+DEAD Q +S Sbjct: 73 RYWSARRASAQLRELD--PALDVLQFGGSVTF-DREDGRRQTFRIVGEDEADPTQGSVSY 129 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV 155 SP+AR L+GK D ++ E E+I + Sbjct: 130 VSPVARALLGKAVGDTAIVAGG----EVEIIAI 158 >UniRef50_Q4KB20 Acetyltransferase, GNAT family family n=9 Tax=Bacteria RepID=Q4KB20_PSEF5 Length = 379 Score = 91.1 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I ++E +L A V+ ++ N + + + D EE +V ++AD S Sbjct: 277 IVELEHELERAIVVKPQQVARN-VITMNSRALLQLDD--EEIEVALVYPEDADSTAGKHS 333 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEY 157 V S I ++G +E D + + E+ KV Y Sbjct: 334 VYSDIGAAILGYQEGDTIDWRISDRTRRIEIRKVLY 369 >UniRef50_C6RP41 GreA/GreB family elongation factor n=4 Tax=Acinetobacter RepID=C6RP41_ACIRA Length = 134 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Query: 53 EQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE 112 E Q I+ +E +L+ A+V++ ++P N V V + S E ++V + Sbjct: 21 EHQSHMTQTIEHLEDELARAEVVEPHEIPAN-VVSMNTRVLITIAPSTEPTEIQLVYPHD 79 Query: 113 ADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGE-VEFEVIKVEY 157 + ++V +PI ++G E + P G ++ ++ KV Y Sbjct: 80 FRGDKGQVNVLAPIGAAILGLAEGQEIEWPQPDGHLMKVKIEKVLY 125 >UniRef50_Q2GA51 GreA/GreB family elongation factor n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GA51_NOVAD Length = 159 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 + + ++ AQ++ +P + V + V + + +T +V EAD Q+ +S+ Sbjct: 59 RMLMEEIGRAQIVPAQDLPPDA-VAMRSVVRFRDEATGAVRTVTLVYPAEADIAQDRVSI 117 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEVE-FEVIKV 155 +P+ GLIG + G+ + +V Sbjct: 118 LTPVGAGLIGLRAGQSIDWPNVRGKQRAITIEQV 151 >UniRef50_A9EFF1 GreA/GreB family elongation factor n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EFF1_9RHOB Length = 146 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Query: 67 AKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPI 126 ++ AQ+++ +MP + V G+ VT + + + ++ +V ++AD ++ +SV +PI Sbjct: 48 EEIGRAQIVEDQQMPGD-VVGIGSKVTYRDETTGQNKSVTLVYPEDADITRSQVSVITPI 106 Query: 127 ARGLIGKEEDDVVVIKTPGGEVE--FEVIKVE 156 L+G E T ++KVE Sbjct: 107 GVALLGLREGASFYWDTRRENQRHMLTILKVE 138 >UniRef50_C9P6Y2 Regulator of nucleoside diphosphate kinase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6Y2_VIBME Length = 136 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 3/104 (2%) Query: 53 EQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDE 112 ++ ++ +E +L A V++ ++P + V +TV SD+ +V + Sbjct: 23 DKLPKLSKELERLENELDRATVLNPEEIPAD-VVTMNSTVKFKFQGSDDVMQKTLVYPHD 81 Query: 113 ADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGG-EVEFEVIKV 155 + IS+ +P+ L+G + + P G E E+I + Sbjct: 82 VKGNDD-ISIFAPVGSALLGLSKGQQLTWPMPNGVERTIEIIDI 124 >UniRef50_B4RF21 Transcription elongation factor n=2 Tax=cellular organisms RepID=B4RF21_PHEZH Length = 214 Score = 89.6 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 48/140 (34%), Gaps = 11/140 (7%) Query: 18 LDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDV 77 L K+ R + A D N H + + +L A V+ Sbjct: 83 LADTKTRER-ARTPTVRVAEADYDRLLNLADHDGPGAE--------LLARELDRAIVVRE 133 Query: 78 TKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDD 137 + V G+TV + +++ +T +V D AD N +SV SP+ L+G D Sbjct: 134 GEKSR-PFVRLGSTVEYRDRLTEKVRTVELVPPDAADIDANRLSVLSPVGAALLGLSVGD 192 Query: 138 VVVIKTPGGE-VEFEVIKVE 156 P G V V Sbjct: 193 TFSWTAPDGRPRVVTVEAVR 212 >UniRef50_B7L307 GreA/GreB family elongation factor n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L307_METC4 Length = 147 Score = 88.8 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 2/97 (2%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + + +L A V+ +P V A V + +D+ + + E D + IS Sbjct: 40 VAWLAEELDRATVVPPGAVPP-RVVTMHARVEYRDDVTDQVRCVTLTYPGEEDAYASGIS 98 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVE-FEVIKVEY 157 V +P+ L+G E + +TP G + V++V + Sbjct: 99 VLTPVGAALVGLSEGHSIRWRTPSGGLRGLTVLRVRF 135 >UniRef50_A4XNX9 GreA/GreB family elongation factor n=16 Tax=Bacteria RepID=A4XNX9_PSEMY Length = 135 Score = 88.4 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 3/94 (3%) Query: 65 IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNS 124 ++A+L A+V+ + ++P G V + V S ++ +V +A + +S+ + Sbjct: 34 LQAELDRAEVVGLDEVPA-GLVTMNSRVHCREESSGKDYHLTLVYPQDAGGE-GTVSILA 91 Query: 125 PIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVEY 157 P+ L+G + PGG+ + ++ VEY Sbjct: 92 PVGSALLGLSVGQHIDWPAPGGKQLKLTLLAVEY 125 >UniRef50_Q930S2 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti RepID=Q930S2_RHIME Length = 140 Score = 88.4 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 3/95 (3%) Query: 63 KDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISV 122 ++ KL V+ ++P + V G+ VT ++ +T+ +V D+ D ++ ISV Sbjct: 39 AELIEKLERPCVLPDDQVPPD-VVKIGSIVTCE-VEDGPCRTFSLVYPDDVDAEKGRISV 96 Query: 123 NSPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVE 156 +P+ L+G V + G+ V++VE Sbjct: 97 LTPVGVALLGLRPGQAVEWFSRDGQRNHLIVVRVE 131 >UniRef50_UPI0001746B72 nucleoside diphosphate kinase regulator protein, putative n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746B72 Length = 137 Score = 87.7 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 3/123 (2%) Query: 36 AREHGDLKENAEYHAAREQQGFCEGRIKDIE-AKLSNAQVIDVTKMPNNGRVIFGATVTV 94 A DL + + + R + + +L +A+V + V V Sbjct: 8 AISQSDLHTLRTFLDHDDAFNPLDARERSLLIERLQDAKVFEDESDDEPSVAGLQTLVRV 67 Query: 95 LNLDSD--EEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEV 152 +L + ++ + +V EA+F+ + IS+ SP+ + G+ VV+ +P G V Sbjct: 68 EDLSTSPPDQFDFTLVLPHEANFEDDQISILSPLGAAVFGRSAGTQVVMDSPTGTRRLLV 127 Query: 153 IKV 155 + V Sbjct: 128 LAV 130 >UniRef50_C3X2V3 GreA/GreB family elongation factor n=2 Tax=Oxalobacter formigenes RepID=C3X2V3_OXAFO Length = 140 Score = 87.3 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 58/133 (43%), Gaps = 11/133 (8%) Query: 25 RRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNG 84 RP I + + NA+Y + D++ +L A V++ ++P + Sbjct: 13 ERPPITVTTHDYERLEQMLRNAKY--------RNIPGMADLQRELDRANVVEPEELPED- 63 Query: 85 RVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTP 144 + +T ++ ++++ +V D+AD + ISV +P+ L+G + + P Sbjct: 64 VITINSTARFIDDCTNDQYEITLVYPDKADG-VSKISVLAPVGSALLGLSAGQSIPWQVP 122 Query: 145 GGEV-EFEVIKVE 156 G + + V+ V+ Sbjct: 123 GRQKLQLRVLDVK 135 >UniRef50_Q15Z69 GreA/GreB family elongation factor n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Z69_PSEA6 Length = 128 Score = 87.3 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%) Query: 43 KENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE 102 + AE E+ + I+ IE +L A ++ +P N V G+ VT LDS + Sbjct: 12 ADLAELEYQLERSKLPDDAIRAIENELDRATIVACKDLPEN-VVAIGSQVTFKILDSQKV 70 Query: 103 QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 T + ++ ++ ISV +PI LIG + +T G+ E+IKVE Sbjct: 71 FTKALCLPHDSVKFEDSISVFAPIGSALIGLSTGQCIKWQTQRGQQSVEIIKVE 124 >UniRef50_Q13WN5 GreA/GreB family elongation factor n=50 Tax=Burkholderia RepID=Q13WN5_BURXL Length = 136 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 3/101 (2%) Query: 59 EGRIKD-IEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQ 117 + R++D ++ L A ++D ++P N V + T+++ S E T+ +V ADF Sbjct: 27 DARLQDMLDDVLERAVIVDSHEIPAN-VVTMNSQATLVDETSGEHMTWTVVYPPNADFAH 85 Query: 118 NLISVNSPIARGLIGKEEDDVVVIKTPGGEVEF-EVIKVEY 157 ++V SP L+G + + + P G + ++ K+ + Sbjct: 86 GRLNVFSPAGLALLGAKRGERIRFTPPSGTEKVLKLEKILF 126 >UniRef50_Q5QX12 Transcription elongation factor family protein n=1 Tax=Idiomarina loihiensis RepID=Q5QX12_IDILO Length = 129 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 + ++E +L+ A++++ MP N VT L++ + T + D+ D + +S Sbjct: 35 LDELEVELARAKIVEPNVMPAN-VACLNRQVTFKVLETGKVFTKTLTAPDQVDKYDDSLS 93 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 V +P+ LIG + KT G E++ V Sbjct: 94 VFAPLGAALIGLSVGQSIQWKTNRGLQSVEIVHVA 128 >UniRef50_A5F052 Regulator of nucleoside diphosphate kinase n=31 Tax=Vibrio RepID=A5F052_VIBC3 Length = 135 Score = 86.5 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 17/112 (15%) Query: 61 RIKDIEAKLS--------------NAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYR 106 RI + L+ A V++ +MP + V +TV L SDE Sbjct: 16 RISQLMDNLATLSPELEKLEEELDRATVLEPAEMPED-VVTMNSTVRFKFLGSDEVMEKT 74 Query: 107 IVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVE-FEVIKVEY 157 +V ++ + +S+ +P+ L+G + PGG ++ E+I + Y Sbjct: 75 LVYPNDVKSSAD-VSIFAPVGSALLGLAVGQQLAWPMPGGTLKTLEIIDIVY 125 >UniRef50_A5D4X0 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4X0_PELTS Length = 150 Score = 86.5 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 5/110 (4%) Query: 49 HAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGR--VIFGATVTVLNLDSDEEQTYR 106 E + E I+ ++ + NA +K+ +N V G+ V + NL E Y Sbjct: 38 KERNEFENLIENYIQRLDRLIRNA---SKSKIADNKVPFVTIGSEVEIQNLSEQEVYKYF 94 Query: 107 IVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 IV ++ ++ IS SP+ + L+ K+ D V +K PGG +++ + Sbjct: 95 IVNPFYSEVREGHISFLSPVGKSLLLKKVGDEVEVKAPGGVFRYKIKSIR 144 >UniRef50_UPI0001AF7314 transcription elongation factor GreA n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF7314 Length = 160 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 16/155 (10%) Query: 2 QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGR 61 Q ++ + E+L+ +L L+ R + ++ ++A + Q + R Sbjct: 10 QRDWISSQAYERLQRKLADLRQ-------------RSAREPADSDFDNSAPDVQRAWQTR 56 Query: 62 IKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLIS 121 I+ I L A V + P++G G +TV D+ + +T+ + + S Sbjct: 57 IRRIHDLLVRADVGE--DPPDDGIAEPGMVLTVRYHDTGDTETFLLGARGAEHCDVEVYS 114 Query: 122 VNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 SP+ +IG + PGG V V Sbjct: 115 PRSPLGAAVIGAIPGEQRSFTLPGGA-NLTVTLVS 148 >UniRef50_A5V983 GreA/GreB family elongation factor n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V983_SPHWW Length = 166 Score = 85.3 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 10/136 (7%) Query: 22 KSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMP 81 K+ RRP I +EA ++ AA E+ + + ++ A + ++P Sbjct: 34 KAGRRPAIHMIDSEAETLANMA-----VAAEERIPQVS---ELLLEEIDRATLYKAARIP 85 Query: 82 NNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVI 141 + V + V ++ + +T ++V +AD +S+ + + GLIG E ++ Sbjct: 86 AD-VVTMHSHVEFVDEANGTSRTVQLVYPKDADIDAGRVSILTLVGAGLIGLREGQSILW 144 Query: 142 KTPGGEVE-FEVIKVE 156 G + +V Sbjct: 145 PGRDGHRRLLTITRVS 160 >UniRef50_A0LZA7 Transcription elongation factor n=1 Tax=Gramella forsetii KT0803 RepID=A0LZA7_GRAFK Length = 146 Score = 85.3 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 24/142 (16%) Query: 15 REELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQV 74 ++E DFLK + ++ A+ H D A I + +L +A++ Sbjct: 10 KKEYDFLKQI--------MSLAKYHKDTSYKAS--------------IYKLNEELKDARI 47 Query: 75 IDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKE 134 + ++MP + + + VT+ E+TY+IV ++ D ++N ISV +P+ L G Sbjct: 48 LTNSEMPLD-VIRLNSLVTIE-TPYAVERTYQIVTPEKGDIRKNKISVLAPMGLALFGYA 105 Query: 135 EDDVVVIKTPGGEVEFEVIKVE 156 + D + P GE ++ +V+ Sbjct: 106 QGDNITWTFPLGESYIKIKEVK 127 >UniRef50_A7IJH2 GreA/GreB family elongation factor n=4 Tax=Rhizobiales RepID=A7IJH2_XANP2 Length = 143 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 4/95 (4%) Query: 64 DIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVN 123 ++ A+L A+++ + ++P V G+ VT +T +V ++AD +SV Sbjct: 45 ELLAELDRARLVPIGRVPATA-VQMGSKVTYE--AGGNARTVTLVYPEDADIAAARVSVM 101 Query: 124 SPIARGLIGKEEDDVVVIKTPGGEV-EFEVIKVEY 157 +PI LIG + + G E +VI+V+ Sbjct: 102 TPIGAALIGLSKGQSICWTARDGRRHELKVIEVQP 136 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.150 0.407 Lambda K H 0.267 0.0457 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,084,802,988 Number of Sequences: 3077464 Number of extensions: 48277119 Number of successful extensions: 202768 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 863 Number of HSP's successfully gapped in prelim test: 175 Number of HSP's that attempted gapping in prelim test: 200791 Number of HSP's gapped (non-prelim): 1257 length of query: 158 length of database: 1,040,396,356 effective HSP length: 118 effective length of query: 40 effective length of database: 677,255,604 effective search space: 27090224160 effective search space used: 27090224160 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 88 (38.3 bits)