50 c3islA_ Probab=99.87   E-value=2e-17  Score=133.76  Aligned_columns=319  Identities=13%

Q ss_pred             CHHHHHHHHHHHHHCC--CCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCHH--HHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             1779999999998298--84099855710799999998348998999917124--9999999996798699930775633
Q batch____       174 GAPCIAQQHAAKVFNA--DKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNH--KSNHHGALLQAGATPVYLETARNPY  249 (732)
Q Consensus       174 G~I~eAq~laA~~fGA--~~T~FlvNGST~gn~a~i~a~~~~Gd~VLv~RNcH--KSV~~gAl~Lsga~Pvyl~P~~~~~  249 (732)
                      ....++++..|++||+  ++..++++|+|.+|.+++.++++|||.|++.+++|  .+.... ....|+.++++.++.+..
T Consensus        40 ~~~~~~~~~la~~~g~~~~~~ii~t~s~t~a~~~~~~~l~~~gd~vlv~~~~~~~~~~~~~-a~~~g~~~~~~~~~~~~~  118 (387)
T c3islA_          40 GIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEI-AERYGANVHMLECEWGTV  118 (387)
T ss_dssp             HHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHH-HHHTTCEEEEEECCTTCC
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH-HHHCCCCEEEEECCCCCC
T ss_conf             9999999999998077920189981956999999999863159918997388214589999-986399159820487655


Q ss_pred             CCCCCCCHHHCCHHHHHHHHHHCHHHHHCCCCCCCEEEEECC-CHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHCCCCC
Q ss_conf             434677832289999999987370133202347537999888-7262277599999999852983999887510002573
Q batch____       250 GFIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIP  328 (732)
Q Consensus       250 g~ig~i~~~~it~e~i~~~l~~~p~aka~~~~~~~~vvlTsP-TY~Gv~~Di~~Ia~~~h~~~~~LlVDEAHGAH~~FhP  328 (732)
                                +..+.+.+.+....         ++.+++++| ++.|...++..+.+.|+.++..+++|++|.++     
T Consensus       119 ----------~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----  174 (387)
T c3islA_         119 ----------FDPEDIIREIKKVK---------PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIG-----  174 (387)
T ss_dssp             ----------CCHHHHHHHHHHHC---------CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTT-----
T ss_pred             ----------CCHHHHHHHHCCCC---------CEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEE-----
T ss_conf             ----------18899997302367---------305887415754210000478887642002453221000012-----


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHEEEEC--------CCCCCCCCCCCCHHHHHHHH--HHHCCCCHH
Q ss_conf             46566754311386557459986000001354701024632--------77644420147989999999--875588713
Q batch____       329 MMADCSPLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKK--------DSHIKGQQRYVPHKRMNNAF--MMHASTSPF  398 (732)
Q Consensus       329 ~~~~~~~~al~~gAD~~~iivvqStHKtLpaLTQtA~LHv~--------~~~~~~~~~~vd~~rl~~al--~m~qSTSPS  398 (732)
                         ..+......+.|    +++.|.||.+.+....++++++        +-+........+...+..++  .-..+.+|+
T Consensus       175 ---~~~~~~~~~~~~----~~~~s~~k~~~~~~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~  247 (387)
T c3islA_         175 ---GCEVKVDEWKID----AAIGGTQKCLSVPSGMAPITYNERVADVIAARNRPITSNYFDLSQLEDYWSERRLNHHTEA  247 (387)
T ss_dssp             ---TSCCCTTTTTCS----EEECCSSSTTCCCSSEEEEEECHHHHHHHHTCCCCCSCSTTCHHHHHHHTSTTCCCSSCCC
T ss_pred             ---EEECCHHHHCCC----EEEECCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
T ss_conf             ---343285440331----2562033345765775999986788754221157766552354776401000462436767


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             89999999999998612028999999999999999997411133210000134444333442111222333345554333
Q batch____       399 YPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEHW  478 (732)
Q Consensus       399 YlLmASLD~Ar~~l~~e~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w  478 (732)
                      ...+..+..+.+....+..+...++..+....+++.+.+.                                        
T Consensus       248 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------------------------  287 (387)
T c3islA_         248 TTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM----------------------------------------  287 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------------------------------------
T ss_conf             7999999999998643445899987654557789999858----------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH-HCCCEEEE----CCCCEEEE-EECCCCCHHHH
Q ss_conf             34444556742237607999825766665532202889999999999-82979663----58976999-96688899999
Q batch____       479 HSFEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLR-ENGVVPEK----CDLNSILF-LLTPAEDMAKL  552 (732)
Q Consensus       479 hgf~~~~~~~~~~DP~Ki~I~t~g~~~~~g~~~~~GisG~~l~~~L~-e~gI~~E~----a~~~~vL~-l~s~g~t~~d~  552 (732)
                       |+....+.....--+ +.+.++.           |+++.++.+.|. ++||.+-.    ...+.+=+ +++...+++|+
T Consensus       288 -g~~~~~~~~~~~~~i-~~~~~~~-----------~~~~~~~~~~L~~~~gi~v~~G~~~~~~~~iRis~~~~~~~~edi  354 (387)
T c3islA_         288 -GLRLFGDDSCKMPVV-TCVEIPG-----------GIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENV  354 (387)
T ss_dssp             -TCCBCSCGGGBCTTE-EEEECCT-----------TCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHH
T ss_pred             -CCEEECCCCCCCCEE-EEEEECC-----------CCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCHHHH
T ss_conf             -989923810036507-9999579-----------999999999999728979990437568987999535988999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCHHCCH
Q ss_conf             9999999999875102221000000
Q batch____       553 QQLVALLVRFEKLLESDAPLAEVLP  577 (732)
Q Consensus       553 ~~L~~aL~~i~~~~~~~~~~~~~~p  577 (732)
                      ++++++|.++-++...+......++
T Consensus       355 ~~~i~~l~~~l~~l~~~~~~~~~~~  379 (387)
T c3islA_         355 LFVLAGLEAVLLRHNAGIEAGKALQ  379 (387)
T ss_dssp             HHHHHHHHHHHHHTTCCCCTTHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf             9999999999998299988531789