 |
| Job Description | P00864 | | Confidence | 48.88% | Date | Thu Jan 5 10:56:57 GMT 2012 |
| Rank | 48 | Aligned Residues | 30 |
| % Identity | 27% | Template | d1vema2 |
| SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
| Resolution | 1.85 |
|
|   |   |
554 | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | |
|
|
. | . | 580 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | W | A | Q | Y | Q | A | Q | D | A | L | I | K | T | C | E | K | A | G | I | E | L | T | L | . |
. |
. |
F | H | G | R | G | G | S | I | G |
| Query Conservation |   |
  |
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   | . | . | . |
|
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|
| . | . | . |   |
|   |
|
|   |   |   |   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|
|
|
| Template Sequence |   |
D | F | S | Y | A | Q | . |
. |
. |
R | F | A | Q | S | V | K | N | A | G | M | K | M | I | P | I | I | S | T | H | Q | C | G | G | N | V | G |
| Template Known Secondary structure |   |
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
| S |
| B | S | S | S | T | T |
| Template Predicted Secondary structure |   |
|  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
64 | . | . | . | . | . | |
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|