BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (303 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P39376 Uncharacterized HTH-type transcriptional regulat... 624 e-178 UniRef50_B5XW05 Transcriptional regulator, LysR family n=14 Tax=... 270 4e-71 UniRef50_D0S485 LysR family transcriptional regulator n=1 Tax=Ac... 246 6e-64 UniRef50_Q5E4K6 Predicted DNA-binding transcriptional regulator ... 233 8e-60 UniRef50_Q6LHK8 Hypothetical transcriptional regulator n=2 Tax=P... 216 5e-55 UniRef50_Q4ZL95 Regulatory protein, LysR:LysR, substrate-binding... 197 5e-49 UniRef50_Q2BGK4 Transcriptional Regulator, LysR family protein n... 194 3e-48 UniRef50_C5BAX2 Transcriptional regulator, LysR family n=3 Tax=G... 174 3e-42 UniRef50_C5CMH8 Transcriptional regulator, LysR family n=2 Tax=c... 157 4e-37 UniRef50_C4WPU3 Transcriptional regulator, LysR family n=1 Tax=O... 152 2e-35 UniRef50_Q0B264 Transcriptional regulator, LysR family n=8 Tax=B... 152 2e-35 UniRef50_B9Z6S7 Transcriptional regulator, LysR family n=1 Tax=L... 151 3e-35 UniRef50_Q21ST1 Transcriptional regulator, LysR family n=4 Tax=B... 146 1e-33 UniRef50_Q5LQ28 Transcriptional regulator, LysR family n=1 Tax=R... 145 1e-33 UniRef50_B9JIP5 Transcriptional regulator protein n=1 Tax=Agroba... 143 7e-33 UniRef50_Q5E4P1 Transcriptional regulator n=4 Tax=Vibrionaceae R... 142 1e-32 UniRef50_Q394R6 Transcriptional regulator, LysR family n=13 Tax=... 142 1e-32 UniRef50_C6B2M0 Transcriptional regulator, LysR family n=2 Tax=R... 141 2e-32 UniRef50_B7H371 HTH-type transcriptional regulator cbl n=11 Tax=... 141 2e-32 UniRef50_Q1BZ57 Transcriptional regulator, LysR family n=76 Tax=... 141 4e-32 UniRef50_A6GPQ8 Putative transcription regulator protein n=1 Tax... 140 6e-32 UniRef50_C4ZM38 Transcriptional regulator, LysR family n=1 Tax=T... 140 8e-32 UniRef50_A9EZ85 Transcriptional regulator, LysR family protein n... 137 5e-31 UniRef50_A9CHQ5 Transcriptional regulator, LysR family n=1 Tax=A... 135 2e-30 UniRef50_Q220G0 Transcriptional regulator, LysR family n=3 Tax=C... 135 3e-30 UniRef50_B5QX35 LysR-family transcriptional regulator n=24 Tax=G... 131 3e-29 UniRef50_A1TLZ5 Transcriptional regulator, LysR family n=2 Tax=A... 131 3e-29 UniRef50_Q11AL0 Transcriptional regulator, LysR family n=1 Tax=C... 130 4e-29 UniRef50_Q21ZS2 Transcriptional regulator, LysR family n=1 Tax=R... 127 3e-28 UniRef50_B8IID1 Transcriptional regulator, LysR family n=5 Tax=A... 126 1e-27 UniRef50_A9BZS3 Transcriptional regulator, LysR family n=2 Tax=C... 124 4e-27 UniRef50_D0ZGF0 Transcriptional regulator n=2 Tax=Edwardsiella R... 124 5e-27 UniRef50_B8IQ92 Transcriptional regulator, LysR family n=3 Tax=M... 122 1e-26 UniRef50_B7UYE4 Probable transcriptional regulator n=6 Tax=Pseud... 122 2e-26 UniRef50_A3YCU0 Putative uncharacterized protein n=1 Tax=Marinom... 121 3e-26 UniRef50_A6X3J9 Transcriptional regulator, LysR family n=2 Tax=O... 121 4e-26 UniRef50_Q7W3G8 LysR family regulatory protein n=2 Tax=Bordetell... 119 1e-25 UniRef50_Q12HA4 Transcriptional regulator, LysR family n=1 Tax=P... 119 2e-25 UniRef50_B8IFG1 Transcriptional regulator, LysR family n=5 Tax=A... 117 4e-25 UniRef50_B6A503 Transcriptional regulator, LysR family n=1 Tax=R... 117 4e-25 UniRef50_Q2SL06 Transcriptional regulator n=3 Tax=Oceanospirilla... 116 1e-24 UniRef50_C6B5Y5 Transcriptional regulator, LysR family n=1 Tax=R... 116 1e-24 UniRef50_B1JFP7 Transcriptional regulator, LysR family n=4 Tax=P... 114 4e-24 UniRef50_D0SM30 LysR family transcriptional regulator n=2 Tax=Ac... 114 4e-24 UniRef50_Q5LKU8 Transcriptional regulator, LysR family n=6 Tax=R... 113 6e-24 UniRef50_A4EX76 Transcriptional regulator, LysR family protein n... 113 9e-24 UniRef50_A8LJG0 Transcriptional regulator n=1 Tax=Dinoroseobacte... 109 1e-22 UniRef50_Q1QWD8 Transcriptional regulator, LysR family n=1 Tax=C... 108 2e-22 UniRef50_Q5LQ40 Transcriptional regulator, LysR family n=1 Tax=R... 108 2e-22 UniRef50_D2TPN0 LysR-family transcriptional regulator n=3 Tax=Ci... 108 2e-22 UniRef50_A6UJW6 Transcriptional regulator, LysR family n=4 Tax=R... 108 3e-22 UniRef50_B2UG98 Transcriptional regulator, LysR family n=4 Tax=B... 107 4e-22 UniRef50_Q46VM9 Transcriptional regulator, LysR family n=4 Tax=C... 107 5e-22 UniRef50_C9YBU0 Putative uncharacterized protein n=1 Tax=Curviba... 106 8e-22 UniRef50_A6FPF9 Transcriptional regulator, LysR family protein n... 105 2e-21 UniRef50_Q16BZ6 Transcriptional regulator, LysR family, putative... 104 4e-21 UniRef50_B9R307 LysR substrate binding domain, putative n=1 Tax=... 103 5e-21 UniRef50_A9I640 Transcriptional regulator, LysR-family n=4 Tax=B... 101 4e-20 UniRef50_A1TXT6 Transcriptional regulator, LysR family n=3 Tax=M... 100 1e-19 UniRef50_A9BU84 Transcriptional regulator, LysR family n=1 Tax=D... 99 2e-19 UniRef50_A1VSV5 Transcriptional regulator, LysR family n=2 Tax=B... 98 3e-19 UniRef50_C6BQ98 Transcriptional regulator, LysR family n=1 Tax=R... 97 7e-19 UniRef50_A1TW95 Transcriptional regulator, LysR family n=8 Tax=C... 96 1e-18 UniRef50_A6E4T8 Transcriptional regulator, LysR family protein n... 96 2e-18 UniRef50_Q168Z1 Transcriptional regulator, LysR family, putative... 94 8e-18 UniRef50_UPI0001903475 LysR family transcriptional regulator n=1... 89 3e-16 UniRef50_B6B926 Transcriptional regulator, LysR family n=1 Tax=R... 83 1e-14 UniRef50_A5N491 Transcriptional regulator n=2 Tax=Clostridium kl... 81 4e-14 UniRef50_A0Q7E8 Transcriptional regulator, LysR family n=14 Tax=... 81 4e-14 UniRef50_A3JF22 Putative LysR-family transcriptional regulator n... 81 5e-14 UniRef50_Q5ZZF5 Transcriptional regulator, LysR family n=5 Tax=L... 79 2e-13 UniRef50_Q3IDC2 Putative transcriptional regulator, LysR family ... 79 2e-13 UniRef50_C6Q178 Transcriptional regulator, LysR family n=1 Tax=C... 79 2e-13 UniRef50_A6X6J5 Transcriptional regulator, LysR family n=2 Tax=O... 79 3e-13 UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding... 78 4e-13 UniRef50_B0MA97 Putative uncharacterized protein n=3 Tax=Clostri... 78 4e-13 UniRef50_Q0I520 Transcription regulator, LysR family n=3 Tax=Pas... 77 6e-13 UniRef50_B7K2F2 Transcriptional regulator, LysR family n=8 Tax=C... 77 8e-13 UniRef50_UPI0000E0F9F3 Transcriptional Regulator, LysR family pr... 77 1e-12 UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax... 77 1e-12 UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=P... 76 1e-12 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 75 2e-12 UniRef50_A1W6X9 Transcriptional regulator, LysR family n=19 Tax=... 75 2e-12 UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=D... 75 3e-12 UniRef50_B5FDE5 Transcriptional regulator, LysR family n=4 Tax=G... 75 3e-12 UniRef50_C9NYW9 Transcriptional regulator LysR family n=2 Tax=Vi... 75 3e-12 UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=... 75 3e-12 UniRef50_B3DV00 RuBisCO operon transcriptional regulator CbbR n=... 74 5e-12 UniRef50_A0Q2F6 Transcriptional regulators, LysR family n=16 Tax... 74 5e-12 UniRef50_Q5WIP7 LysR family transcriptional regulator n=2 Tax=Ba... 74 6e-12 UniRef50_B1KND7 Transcriptional regulator, LysR family n=2 Tax=A... 74 8e-12 UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n... 74 9e-12 UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=C... 73 1e-11 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 73 1e-11 UniRef50_C5CV21 Transcriptional regulator, LysR family n=3 Tax=V... 73 1e-11 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 73 1e-11 UniRef50_B7H4B0 LysR substrate binding domain protein n=10 Tax=G... 73 2e-11 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 72 2e-11 UniRef50_A4XFH5 Transcriptional regulator, LysR family n=3 Tax=S... 72 2e-11 UniRef50_B1YFC0 Transcriptional regulator, LysR family n=3 Tax=B... 72 2e-11 UniRef50_C6B6X6 Transcriptional regulator, LysR family n=1 Tax=R... 72 3e-11 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 72 4e-11 UniRef50_Q8EL24 Transcriptional regulator (LysR family) n=1 Tax=... 71 4e-11 UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=B... 71 4e-11 UniRef50_P39127 HTH-type transcriptional regulator citR n=3 Tax=... 71 4e-11 UniRef50_Q6F9H5 Putative transcriptional regulator n=1 Tax=Acine... 71 4e-11 UniRef50_C8PZE4 Ben operon transcriptional regulator BenM n=1 Ta... 70 6e-11 UniRef50_Q0HUM5 Transcriptional regulator, LysR family n=20 Tax=... 70 7e-11 UniRef50_B4EDR0 LysR family regulatory protein n=1 Tax=Burkholde... 70 8e-11 UniRef50_Q62XD4 Transcriptional regulator CitR n=3 Tax=Bacillus ... 70 8e-11 UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacterace... 70 9e-11 UniRef50_B4RYM7 Probable transcriptional regulator n=1 Tax=Alter... 70 1e-10 UniRef50_B1ZVT1 Transcriptional regulator, LysR family n=3 Tax=V... 70 1e-10 UniRef50_C1DJP6 LysR family transcriptional regulator protein n=... 70 1e-10 UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibaci... 69 1e-10 UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=C... 69 2e-10 UniRef50_Q0B1K1 Transcriptional regulator, LysR family n=2 Tax=B... 69 2e-10 UniRef50_Q15VE5 Transcriptional regulator, LysR family n=1 Tax=P... 69 2e-10 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 69 2e-10 UniRef50_C6RKS4 Transcriptional regulator, LysR family n=2 Tax=A... 69 2e-10 UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=B... 69 2e-10 UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma... 69 2e-10 UniRef50_C6D8F3 Transcriptional regulator, LysR family n=1 Tax=P... 69 3e-10 UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=P... 69 3e-10 UniRef50_C0CW79 Putative uncharacterized protein n=1 Tax=Clostri... 69 3e-10 UniRef50_Q2BJY7 Putative transcriptional regulator, LysR family ... 69 3e-10 UniRef50_A9KS97 Transcriptional regulator, LysR family n=1 Tax=C... 68 3e-10 UniRef50_A1RHL4 Transcriptional regulator, LysR family n=21 Tax=... 68 3e-10 UniRef50_Q2GAY9 Transcriptional regulator, LysR family n=1 Tax=N... 68 4e-10 UniRef50_D0L1H0 Transcriptional regulator, LysR family n=1 Tax=H... 68 4e-10 UniRef50_UPI0001AEC4E8 probable transcriptional regulator n=1 Ta... 68 4e-10 UniRef50_C6CDQ4 Transcriptional regulator, LysR family n=1 Tax=D... 68 5e-10 UniRef50_B0V4K3 HTH-type transcriptional regulator n=13 Tax=Acin... 68 5e-10 UniRef50_A1RF10 Transcriptional regulator, LysR family n=5 Tax=S... 68 5e-10 UniRef50_A8G944 Transcriptional regulator, LysR family n=8 Tax=E... 68 5e-10 UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=un... 68 5e-10 UniRef50_A9GLA2 Transcriptional regulator, LysR family n=1 Tax=S... 67 6e-10 UniRef50_A9KDY0 Transcriptional regulator, LysR family n=3 Tax=C... 67 6e-10 UniRef50_A4W7U5 Transcriptional regulator, LysR family n=26 Tax=... 67 6e-10 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 67 6e-10 UniRef50_D0SSL1 Transcriptional regulator n=2 Tax=Acinetobacter ... 67 6e-10 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 67 6e-10 UniRef50_A1ZLC1 Transcriptional Regulator, LysR family n=1 Tax=M... 67 7e-10 UniRef50_A6NRJ5 Putative uncharacterized protein n=1 Tax=Bactero... 67 7e-10 UniRef50_B9QSF7 LysR substrate binding domain protein n=3 Tax=Rh... 67 8e-10 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 67 9e-10 UniRef50_A7AXW3 Putative uncharacterized protein n=1 Tax=Ruminoc... 67 9e-10 UniRef50_O33945 Probable cat1 operon transcriptional activator n... 67 9e-10 UniRef50_C4GDC9 Putative uncharacterized protein n=2 Tax=Bacteri... 67 9e-10 UniRef50_Q7WPW7 LysR family regulatory protein n=4 Tax=Bordetell... 67 1e-09 UniRef50_Q13PB2 Transcriptional regulator, LysR family n=1 Tax=B... 67 1e-09 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 67 1e-09 UniRef50_A8H7F3 Transcriptional regulator, LysR family n=1 Tax=S... 67 1e-09 UniRef50_A0Y7Z6 Probable transcriptional regulator n=1 Tax=marin... 66 1e-09 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 66 1e-09 UniRef50_D0J2L9 Transcriptional regulator, LysR family n=3 Tax=P... 66 1e-09 UniRef50_B6WUU7 Putative uncharacterized protein n=1 Tax=Desulfo... 66 1e-09 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 66 1e-09 UniRef50_A6VX83 Transcriptional regulator, LysR family n=1 Tax=M... 66 1e-09 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 66 1e-09 UniRef50_Q12CJ2 Transcriptional regulator, LysR family n=22 Tax=... 66 1e-09 UniRef50_C3LW21 Transcriptional regulator, LysR family n=49 Tax=... 66 2e-09 UniRef50_A6GL91 Transcriptional regulator, LysR family protein n... 66 2e-09 UniRef50_Q6LKX3 Putative uncharacterized protein n=1 Tax=Photoba... 66 2e-09 UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=B... 66 2e-09 UniRef50_C3WA71 LysR family transcriptional regulator n=1 Tax=Fu... 66 2e-09 UniRef50_B9Y3A3 Putative uncharacterized protein n=1 Tax=Holdema... 66 2e-09 UniRef50_Q0B7J0 Transcriptional regulator, LysR family n=1 Tax=B... 66 2e-09 UniRef50_A6BDD9 Putative uncharacterized protein n=1 Tax=Dorea l... 66 2e-09 UniRef50_A3CZ37 Transcriptional regulator, LysR family n=4 Tax=S... 66 2e-09 UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 Re... 66 2e-09 UniRef50_Q0EZZ2 Transcriptional regulator n=1 Tax=Mariprofundus ... 66 2e-09 UniRef50_UPI000174499E transcriptional regulatory protein, LysR ... 65 2e-09 UniRef50_C4ZFB9 Transcriptional regulator GltC n=13 Tax=Firmicut... 65 2e-09 UniRef50_B6G0F8 Putative uncharacterized protein n=1 Tax=Clostri... 65 2e-09 UniRef50_A3IBB5 Transcriptional regulator (LysR family) protein ... 65 2e-09 UniRef50_B7HRA4 Transcriptional regulator, LysR family n=70 Tax=... 65 2e-09 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 65 2e-09 UniRef50_P96725 Uncharacterized HTH-type transcriptional regulat... 65 2e-09 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 65 2e-09 UniRef50_D2YDB3 HTH-type transcriptional activator aaeR n=2 Tax=... 65 3e-09 UniRef50_A4EV39 Transcriptional regulator, LysR family protein n... 65 3e-09 UniRef50_B5JK93 Putative uncharacterized protein n=1 Tax=Verruco... 65 3e-09 UniRef50_A7IJK5 Transcriptional regulator, LysR family n=1 Tax=X... 65 3e-09 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 65 3e-09 UniRef50_C9Y5B3 Putative uncharacterized protein n=1 Tax=Cronoba... 65 3e-09 UniRef50_A8GGJ1 Transcriptional regulator, LysR family n=6 Tax=G... 65 3e-09 UniRef50_C8WF85 Transcriptional regulator, LysR family n=3 Tax=Z... 65 3e-09 UniRef50_C8SMW5 Transcriptional regulator, LysR family n=1 Tax=M... 65 4e-09 UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=B... 65 4e-09 UniRef50_B2UD39 Transcriptional regulator, LysR family n=6 Tax=R... 65 4e-09 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 65 4e-09 UniRef50_C7BI08 Transcriptional regulator n=2 Tax=Gammaproteobac... 65 4e-09 UniRef50_C5ENY2 Transcriptional regulator n=5 Tax=Firmicutes Rep... 65 4e-09 UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Ge... 64 4e-09 UniRef50_A5VE89 Transcriptional regulator, LysR family n=1 Tax=S... 64 4e-09 UniRef50_B8CQS4 Transcriptional regulator, LysR family n=1 Tax=S... 64 5e-09 UniRef50_A8SQI2 Putative uncharacterized protein n=1 Tax=Coproco... 64 5e-09 UniRef50_D2RND2 Transcriptional regulator, LysR family n=1 Tax=A... 64 5e-09 UniRef50_Q5LR91 Transcriptional regulator, LysR family n=3 Tax=R... 64 5e-09 UniRef50_Q0BC55 Transcriptional regulator, LysR family n=9 Tax=B... 64 5e-09 UniRef50_C3KLX8 Putative transcriptional regulatory protein, Lys... 64 5e-09 UniRef50_D0BX38 Transcriptional regulator n=2 Tax=Acinetobacter ... 64 5e-09 UniRef50_B9JLT3 Transcriptional regulator protein n=2 Tax=Rhizob... 64 6e-09 UniRef50_C9PA71 Transcriptional regulators LysR family n=1 Tax=V... 64 6e-09 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 64 6e-09 UniRef50_D0GM40 Transcriptional regulator, LysR family n=1 Tax=L... 64 6e-09 UniRef50_C7JE36 Transcriptional regulator LysR n=10 Tax=Acetobac... 64 6e-09 UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=... 64 6e-09 UniRef50_D0J169 Transcriptional regulator, LysR family n=12 Tax=... 64 6e-09 UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=B... 64 7e-09 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 64 7e-09 UniRef50_A9D076 Bacterial regulatory protein LysR, HTH motif:Lys... 64 7e-09 UniRef50_C6D1Z1 Transcriptional regulator, LysR family n=2 Tax=B... 64 7e-09 UniRef50_A0LGP0 Transcriptional regulator, LysR family n=2 Tax=D... 64 7e-09 UniRef50_C6BG32 Transcriptional regulator, LysR family n=1 Tax=R... 64 7e-09 UniRef50_O06703 HTH-type transcriptional regulator bbuR n=1 Tax=... 64 7e-09 UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=c... 64 7e-09 UniRef50_B4SSL0 Transcriptional regulator, LysR family n=8 Tax=X... 64 7e-09 UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=F... 64 7e-09 UniRef50_B7GJV0 Transcriptional regulator (LysR family) n=1 Tax=... 64 7e-09 UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=... 64 8e-09 UniRef50_C6B9F9 Transcriptional regulator, LysR family n=4 Tax=P... 64 8e-09 UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=A... 64 8e-09 UniRef50_C7RAV2 Transcriptional regulator, LysR family n=1 Tax=K... 64 8e-09 UniRef50_B3PFN1 Transcriptional regulator, LysR family n=1 Tax=C... 64 8e-09 UniRef50_D0J2N5 Transcriptional regulator, LysR family n=1 Tax=C... 64 9e-09 UniRef50_Q1QB59 Transcriptional regulator, LysR family n=3 Tax=P... 64 9e-09 UniRef50_B2U625 HTH-type transcriptional regulator TdcA n=1 Tax=... 64 9e-09 UniRef50_Q485T8 Substrate-binding transcriptional regulator, Lys... 64 9e-09 UniRef50_D0STU0 LysR bacterial regulatory helix-turn-helix prote... 64 1e-08 UniRef50_Q0B9D7 Transcriptional regulator, LysR family n=19 Tax=... 63 1e-08 UniRef50_Q6MNV3 LysR-family regulatory protein n=1 Tax=Bdellovib... 63 1e-08 UniRef50_A7UH62 Putative LysR family regulator n=1 Tax=Desulfoti... 63 1e-08 UniRef50_Q13GN5 Transcriptional regulator, LysR family n=1 Tax=B... 63 1e-08 UniRef50_B5WHI7 Transcriptional regulator, LysR family n=1 Tax=B... 63 1e-08 UniRef50_UPI0001B4C1F4 LysR family transcriptional regulator n=1... 63 1e-08 UniRef50_Q9RLJ6 Putative regulator of LysR family n=2 Tax=Oenoco... 63 1e-08 UniRef50_A6DQJ6 Probable transcriptional regulator n=1 Tax=Lenti... 63 1e-08 UniRef50_Q0KCL9 Transcriptional regulator, LysR-family n=2 Tax=C... 63 1e-08 UniRef50_B5WC59 Transcriptional regulator, LysR family n=1 Tax=B... 63 1e-08 UniRef50_C9L6F7 Transcriptional regulatory protein n=2 Tax=Firmi... 63 1e-08 UniRef50_A3SMW7 Transcriptional regulator, LysR family protein n... 63 1e-08 UniRef50_A9ISQ5 Transcriptional regulator, LysR-family n=1 Tax=B... 63 1e-08 UniRef50_A7IQF8 Transcriptional regulator, LysR family n=12 Tax=... 63 1e-08 UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n... 63 1e-08 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 63 1e-08 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 63 1e-08 UniRef50_A5Z8L5 Putative uncharacterized protein n=1 Tax=Eubacte... 63 1e-08 UniRef50_Q65QK1 LysR protein n=1 Tax=Mannheimia succiniciproduce... 63 1e-08 >UniRef50_P39376 Uncharacterized HTH-type transcriptional regulator yjiE n=94 Tax=Gammaproteobacteria RepID=YJIE_ECOLI Length = 303 Score = 624 bits (1610), Expect = e-178, Method: Compositional matrix adjust. Identities = 303/303 (100%), Positives = 303/303 (100%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR Sbjct: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 Query: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII Sbjct: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 Query: 121 SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS Sbjct: 121 SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD Sbjct: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI Sbjct: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 Query: 301 VLS 303 VLS Sbjct: 301 VLS 303 >UniRef50_B5XW05 Transcriptional regulator, LysR family n=14 Tax=Gammaproteobacteria RepID=B5XW05_KLEP3 Length = 302 Score = 270 bits (691), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 133/295 (45%), Positives = 208/295 (70%), Gaps = 4/295 (1%) Query: 4 CGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVT 63 G++L N+E KWLYD + LE+ R+F+ AA +RN+SQ +FSRRI++LE ++G +F+R Sbjct: 3 TGSVLANLEVKWLYDVIALEESRSFTLAAKARNISQSSFSRRIQSLEASLGFSIFDRSAN 62 Query: 64 PLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM 123 PLQL+ +GKIF R++L ++ ++ ++G ++ Q KI+I AA SLS+ LLP II+ Sbjct: 63 PLQLTNRGKIFVGYARNMLDDMDFQISRIKGLNNTTQ-KIRIDAAPSLSVLLLPEIIAGY 121 Query: 124 PPLF--TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD 181 T+ +E+I+V++AV L+EG+SD I SF++E+L+ PF + ++F+S L V D Sbjct: 122 TDRKNKTFHVESINVNDAVFNLKEGKSDFILSFYNEELMNYPFINHKIFDSYLHLVSPCD 181 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 EHG LF+L + PL+ Y+ +SYMGR +N+ + R E++FS FVSSMSELLK++ L+G Sbjct: 182 EHGRPLFHLHRGVLPLMKYANDSYMGRQVNQVIDRTPEITFSLTFVSSMSELLKRMILNG 241 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 G+ WLP+Y+IQ+E+ G+L +L+ D L +PI A+ YR +R+N AERFW+ ++ Sbjct: 242 DGVGWLPQYSIQRELDEGRLTILD-DRLSLPIGAWLYRSGSRLNQAAERFWQHIK 295 >UniRef50_D0S485 LysR family transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S485_ACICA Length = 298 Score = 246 bits (629), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 121/299 (40%), Positives = 192/299 (64%), Gaps = 3/299 (1%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 ++ NIE KWLYD + LEK RNF+ A+ RN+SQ + SRRI+ALE ++G E+F+R+ +PLQ Sbjct: 1 MIQNIELKWLYDLIVLEKYRNFTVASDIRNISQSSLSRRIQALENSLGFEVFDRETSPLQ 60 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL 126 L+EQGK+F R+LL E N+ +++G ++ + K+ IA+AHSL+ + P I+ + Sbjct: 61 LTEQGKLFILHARNLLDDFEFNIDQIKG-DNHVRSKVTIASAHSLAGYIFPKILGNLKNY 119 Query: 127 --FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + +EAI+V+E VD L+ GQ D I SF+D+DL+ F +LF ++L+ V A + G Sbjct: 120 QEKIFHVEAINVNETVDSLKNGQCDFIASFYDDDLMNPQFLCHKLFSAKLYLVTAPNHLG 179 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 F+L PL+NY+ +SYMG+ +N+ L H F T FVSSMS LLK + G G+ Sbjct: 180 RPKFSLEDTSIPLMNYTDDSYMGKKVNKFLQDHHSDKFETNFVSSMSLLLKDMIKGGYGV 239 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVLS 303 WLP+Y+IQ E++ +L+++ E V+ + Y YR + R+N +E W ++ ++ ++ Sbjct: 240 GWLPDYSIQDELKQNQLMIMPIKESVLSVDIYLYRSSARLNATSEGLWNFVKAIDWTIA 298 >UniRef50_Q5E4K6 Predicted DNA-binding transcriptional regulator n=6 Tax=Vibrionaceae RepID=Q5E4K6_VIBF1 Length = 293 Score = 233 bits (593), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 119/296 (40%), Positives = 184/296 (62%), Gaps = 11/296 (3%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+E+KWL DFL L K +NFSQAA RNV+QPAFSRRIR LE +G EL +R+ P++L+ Sbjct: 2 NVESKWLEDFLVLAKVKNFSQAAELRNVTQPAFSRRIRLLEDTVGAELVDRKSKPIELTP 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII-----SQMP 124 GK+F R L+ Q+E+ ++++ S +++AAAHSL+ L+P + Sbjct: 62 SGKLFRITARTLVNQIEAGISQISDLSQLGGNVVQVAAAHSLATSLIPKMQQAFDEGDYK 121 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P+ + +EAIDVDEA +LREG D + +F D+ L P+ + +++L PV A DE G Sbjct: 122 PILS--VEAIDVDEATKELREGACDILLAFDDDILRLPPYQSQLIAKTELLPVSACDEMG 179 Query: 185 EALFN-LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + +++ ++Q P L YS SYMGR + + R +++ + F SSM+++LK + L+ G Sbjct: 180 KPIYDFISQGAVPWLTYSSTSYMGRQVE--IIRE-QVALTPIFSSSMTDMLKILVLNKQG 236 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 IAWLP Y+IQ+E+ K+ ++ L +PI+ YAYR R++P E+ W L L+ Sbjct: 237 IAWLPAYSIQEELAQKKVAIIGEQSLRLPIEYYAYRYQARLHPAGEKVWSILCNLD 292 >UniRef50_Q6LHK8 Hypothetical transcriptional regulator n=2 Tax=Photobacterium profundum RepID=Q6LHK8_PHOPR Length = 299 Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 118/295 (40%), Positives = 188/295 (63%), Gaps = 8/295 (2%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + NIETKWL DFL L + +NFS AA RNV+QPAFSRRI+ LE +G+ L +R +P++L Sbjct: 1 MKNIETKWLQDFLILAELQNFSHAATVRNVTQPAFSRRIKLLEAELGLVLIDRSKSPIEL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--PP 125 + GK F + + ++ Q++ ++ L G S + ++++ AHS+S+ LLP + S + P Sbjct: 61 TLCGKQFKTTAQSIIHQIDEEVSRLAGCSFLGRHTVRLSTAHSISISLLPKLHSSLFNPK 120 Query: 126 LFT-WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 L T ++ A +VD+AV+ L +G+ D +FSF+++ L AP+ I L S L+ V A DE G Sbjct: 121 LNTNLSVVANEVDDAVELLIDGKCDFLFSFYEDRLQVAPYRSIYLGRSFLYCVSAVDESG 180 Query: 185 EALFNLA-QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 L++L P L+Y+ SYMGR ++R +S+L+ +T SSM++ +K + L G G Sbjct: 181 NTLYDLENNDDVPCLDYTPESYMGRALHRA---NSKLTSNTVCSSSMTDFIKALVLQGKG 237 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 I+WLP+YAI++E+ SG+L +L E V P+ Y YR ++++ E W EL ++ Sbjct: 238 ISWLPDYAIKEELASGQLKILTEREPV-PLDLYVYRYYSKLHSSCEAMWNELSQV 291 >UniRef50_Q4ZL95 Regulatory protein, LysR:LysR, substrate-binding n=21 Tax=Gammaproteobacteria RepID=Q4ZL95_PSEU2 Length = 315 Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 114/299 (38%), Positives = 176/299 (58%), Gaps = 15/299 (5%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 L N+E+KWL DF L R+FSQAA R V+QPAFSRRIR+LE A+G+ L NR TP++L Sbjct: 16 LMNLESKWLEDFSALAATRSFSQAAERRFVTQPAFSRRIRSLESALGLTLVNRSRTPIEL 75 Query: 68 SEQGKIFHSQIRHLLQQLES---NLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP 124 + G++F R +++QL +L L GG +++AAAHSL+LG P I+Q+ Sbjct: 76 TAAGQLFLVTARTVVEQLGEVVRHLHHLEGGQGEV---MQVAAAHSLALGFFPRWIAQLR 132 Query: 125 PL---FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDL---LEAP-FDHIRLFESQLFPV 177 + A +V +AV LREG D + +F+D D ++A F + L +++ PV Sbjct: 133 NEGLNIATRLVATNVGDAVHALREGGCDLMLAFYDPDAALQMDAEIFPSLHLGHTEMLPV 192 Query: 178 CASDEHGEALFNL-AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQ 236 CA+D G LF++ + PLL YS +++GR +N L R L F+T + ++M++ LK Sbjct: 193 CAADAEGRPLFDMEGEGSVPLLAYSTGAFLGRSVN-LLLRQRNLRFTTVYETAMADSLKS 251 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 +AL+G GIAW+P+ +++ E+ G+LVV + +P++ YR WR+L Sbjct: 252 MALEGLGIAWVPQLSVRAELARGELVVCGGPQWHVPLEIRLYRCALVRKANVRLLWRKL 310 >UniRef50_Q2BGK4 Transcriptional Regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGK4_9GAMM Length = 308 Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 106/295 (35%), Positives = 173/295 (58%), Gaps = 10/295 (3%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 NIETKWL DFL+L K +NFS++A R+++QPAFSRRI++LE A+G EL +R+ P+ L++ Sbjct: 2 NIETKWLEDFLSLAKTQNFSRSAKERHLTQPAFSRRIQSLESAVGCELIDRRSVPVTLTD 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPP 125 +G +F ++L+ QLES ++ ++ + + I A +H+LSL + P I S +P Sbjct: 62 EGLLFKETAQNLILQLESCISHIQSLAGKSHSVIDFAVSHALSLSMFPGFIQSLQSAIPG 121 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL-EAPFDHIRLFESQLFPVCASDEHG 184 + I A + DE L+ G D +F+F D L E F + L + +L PVC++D+ G Sbjct: 122 ITVRQIVA-NADECSQALKNGICDFLFAFEDSSLNDELKFASLSLEQEKLIPVCSTDKSG 180 Query: 185 EALFNLAQP---HFPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSELLKQVALD 240 LF+L +P L+Y N Y+GR +++ + R + F S M++ LK +AL Sbjct: 181 NPLFDLDDADSFSYPFLSYPDNIYLGRSVSQLIKRPPRVIELQKAFESPMADSLKGMALQ 240 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G GIAW+P +++ +E++ G LV+ D +P+ YR + +E+ W+ L Sbjct: 241 GTGIAWVPAFSVTEELKQGSLVICGGDAWQVPLNICVYRKQRVLCGESEQLWQLL 295 >UniRef50_C5BAX2 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=C5BAX2_EDWI9 Length = 306 Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 156/289 (53%), Gaps = 5/289 (1%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL DFLTL + RNFS+AA SR+++QPAF R IRALE+++G +L +R TP+ L+ Sbjct: 1 MEIGWLEDFLTLAELRNFSRAAASRHITQPAFGRHIRALEESVGQQLVDRSTTPVTLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLS----LGLLPSIISQMPPL 126 G F + Q L + G ++ +A HSLS L L+ + + P Sbjct: 61 GYQFRLLAHAMTNQWHEGLNNINGRPQALLHPVRFSAPHSLSSPFLLDLIAAASADDPAP 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 + ++ + VD AV+ L EG SD + +F LL+ PFD++ L L VCA D G Sbjct: 121 LPFGVDILRVDFAVEALMEGASDFLLAFDTHALLQPPFDNLLLGRGDLLLVCAPDPDGRP 180 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 F + P+L Y+ +SY R++ R + ++ F +S+ +L +Q+AL G G+ W Sbjct: 181 RFQPGEQPVPVLRYTPDSYSARMVERLMPQYP-FPARPLFEASLCDLHRQMALRGHGLTW 239 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 L + I E+ G+LV ++R +P Q YR R++ AE FW+ L Sbjct: 240 LADCQIGAELAEGRLVAVDRQRWCVPYQIRLYRNRARLHQRAEAFWQRL 288 >UniRef50_C5CMH8 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=C5CMH8_VARPS Length = 329 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 164/287 (57%), Gaps = 20/287 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ETKWL DF++L + R+FS++A R+V+QPAFSRRI+ALE G +L +R P +L+ Sbjct: 1 METKWLEDFISLAETRSFSRSAQLRHVTQPAFSRRIQALEGWAGTDLVDRSSYPTRLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM----PPL 126 G+ +SQ +LQ L+S A LRG S Q I+IA H+L+ PS ++ + P+ Sbjct: 61 GQTLYSQAIEMLQSLQSTRAMLRGHSAAGQDVIEIAVPHTLAFTFFPSWVTSLREHFGPI 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDE 182 + I A++V +AV +L EG D + ++H L ++ + L E + P +D Sbjct: 121 KSRLI-ALNVHDAVLRLVEGSCDLLIAYHHPSQPLQLDANKYEMVSLGEETVAPWVKADA 179 Query: 183 HGEALFNL----AQPHFPLLNYSRNSYMGRLINRTLTRH-SELSFSTFFVSSMSELLKQV 237 G F L QP P L Y+ +Y+GR++++ L + + + + M+E LK + Sbjct: 180 DGAPRFRLPGRPGQP-LPYLGYAPGAYLGRVVDQLLKESGTAIHLDRVYETDMAEGLKVM 238 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVV-----LNRDELVIPIQAYAYR 279 AL+G GIA+LP+ A+++EI++ KLV ++ E + I+AY R Sbjct: 239 ALEGHGIAFLPQSAVRKEIKARKLVSALPPEIDSLEATMEIRAYRER 285 >UniRef50_C4WPU3 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPU3_9RHIZ Length = 323 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 163/300 (54%), Gaps = 14/300 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL DFL + RNFS AA SRN+SQPAFSRRIR+LE +G +L +R P+ L+ Sbjct: 9 MELAWLEDFLEIVATRNFSTAAASRNISQPAFSRRIRSLESWVGADLLDRSTYPVHLTSA 68 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ----MPPL 126 G +F + + L++ + + + + + AA H+L++ P+ IS P+ Sbjct: 69 GNMFVPRCQELVRDMYRLRTDCHNVAGANSQLLTFAALHTLAIYFFPNWISGSGFPSSPV 128 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDED---LLEA-PFDHIRLFESQLFPVCASDE 182 ++ D E ++ L G+ + ++ D +LEA PF+ +++ + +L V +D Sbjct: 129 RC-SMHTGDFLECIEHLSSGKCNFAITYDHPDGPPVLEAGPFESLQIGKDRLILVSGTDA 187 Query: 183 HGEALFNLAQ---PHFPLLNYSRN-SYMGRLINRTLTR-HSELSFSTFFVSSMSELLKQV 237 G+ L++L P L+YS N Y+G+LI+ +R L+ ST + SS++E LKQ+ Sbjct: 188 AGKPLYDLDTVEGERIPYLSYSWNDGYLGKLISLIQSRWRRPLNLSTVYQSSLAEGLKQM 247 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 A+ G GIAWLP+ +Q+ I +L + ++ + I+ +R + AE FW+ L E Sbjct: 248 AIAGQGIAWLPQICVQKSISQNELTQIGGQQMSLEIEIRIFRRAGAKDRDAEAFWKYLAE 307 >UniRef50_Q0B264 Transcriptional regulator, LysR family n=8 Tax=Burkholderia RepID=Q0B264_BURCM Length = 321 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 93/298 (31%), Positives = 154/298 (51%), Gaps = 11/298 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KW+ DFL L + ++FS+AA RNV+Q FSRRI++LEQ IG EL +R P L+ Sbjct: 18 MEIKWIEDFLALAQYQSFSRAAEFRNVTQSGFSRRIQSLEQWIGAELIDRSSFPPVLTPA 77 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G++F +L +L A +R A + ++IAA H+++L LP + + P F Sbjct: 78 GRLFRETAEDVLSRLFDTRAIIRTEQRIAGKSLQIAAGHTIALSFLPGWLKALAPHFGEV 137 Query: 131 ---IEAIDVDEAVDKLREGQSDCIFSFHDEDLL----EAPFDHIRLFESQLFPVCASDEH 183 + +V +++ L G + +F++H +L A + H+ + L P C + Sbjct: 138 RARVIPTNVHDSILMLVNGNCELMFAYHHPELPLHLDPAKYAHLTVGLDTLMPACRPNRR 197 Query: 184 GEALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSEL-SFSTFFVSSMSELLKQVAL 239 F L Q PL++Y+ SY GR + L R + + + S M+E+LK++ + Sbjct: 198 SAPAFRLPGTKQTPLPLISYTETSYFGRCLALLLGRAPDTPALQLHYESDMAEVLKKLVM 257 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 +G GIAWLP AI E+ +G+LV + ++ YR + + + W+ LRE Sbjct: 258 EGEGIAWLPRSAIAAELAAGELVPAGPAAWNLEVELRVYRDVSNRSEFLDTLWQHLRE 315 >UniRef50_B9Z6S7 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6S7_9NEIS Length = 307 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 157/300 (52%), Gaps = 12/300 (4%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 +W+ D L L +NFS+AA +R+++Q A SRRIR+LE+ +G EL +R PL+L++ G++ Sbjct: 4 RWIGDLLALADTKNFSRAAEARHITQSALSRRIRSLEEWVGAELVHRGSYPLELTQAGQL 63 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTWA 130 F Q R L+ L A++R + + I++ A H+LS+ LP + Q F Sbjct: 64 FCEQGREALRLLLEARADIRQETRMPGKAIQVRAGHTLSMTFLPKWMKQFQRRHGHFNAR 123 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEHGEA 186 + A +V +AV L EG D +F +H L A FD++ L + PV A G+ Sbjct: 124 VVAENVLDAVMALSEGSCDLMFCYHHPRAPILLDPAKFDYLTLGQEAFIPVSAVSASGKP 183 Query: 187 LFNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSELSFSTF-FVSSMSELLKQVALDGC 242 F+L P L Y+ +++GR++ L + F + + M+ LL +A +G Sbjct: 184 AFSLPGRKNIPIPYLAYTSTTFLGRVVEVILKQAPTPYFLELCYEADMAMLLMNMAKEGY 243 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVL 302 G+AWLPE ++ + ++ G LV +E ++ +YR N + WR L E+E V+ Sbjct: 244 GVAWLPESSVAEALQQGALVKAGGEEWSTQLEIRSYRAKQNTNATLQDLWRSL-EMESVV 302 >UniRef50_Q21ST1 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q21ST1_RHOFD Length = 332 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 161/285 (56%), Gaps = 18/285 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ETKWL DF++L + R+FS++A R+V+QPAFSRRI++LE G +L +R P +L+ Sbjct: 1 METKWLEDFVSLAETRSFSRSAQLRHVTQPAFSRRIQSLETWAGTDLVDRSNYPTRLTPG 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS----QMPPL 126 G+ ++Q +LQ L+S A LRG + Q I+ A H+L+ P+ +S Q P+ Sbjct: 61 GETLYAQSLEVLQALQSTRAMLRGHASAGQDVIEFAVPHTLAFTFFPAWVSALRQQFGPI 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDE 182 + I A++V +AV +L EG D + ++H L ++ + L E + P D Sbjct: 121 KSRLI-ALNVHDAVMRLVEGSCDLLIAYHHPSQPFQLDADRYEMVSLGEEVVAPYAKPDA 179 Query: 183 HGEALFNL----AQPHFPLLNYSRNSYMGRLINRTLTRH-SELSFSTFFVSSMSELLKQV 237 G +F L QP P L Y+ +Y+G++++ L + + + F + + M+E LK + Sbjct: 180 DGAPMFLLPGRPGQP-LPYLGYAPGAYLGQMVDLILKQSGTAIHFDRVYETDMAEGLKAM 238 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVV---LNRDELVIPIQAYAYR 279 AL+G GIA+LP A+++++ + KLV L+ L I ++ YR Sbjct: 239 ALEGHGIAFLPFSAVKKDLCARKLVSAVPLDLKGLQITMEVRLYR 283 >UniRef50_Q5LQ28 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LQ28_SILPO Length = 297 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 150/292 (51%), Gaps = 11/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL DF+ L F++AA +RN+SQ AF+RRI+ LE +G LF+R V P+ L++ Sbjct: 1 MELDWLEDFVALSSAGVFAKAADARNISQSAFTRRIKNLEYWVGTPLFDRSVHPVTLTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLP----SIISQMPPL 126 G+ F ++ L + AE RG + + AA H+L++ P I + P+ Sbjct: 61 GESFRPVALDMINTLNTARAEARGLARREDAVLDFAALHTLAISYFPRWLNRISGAIGPI 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL----EAPFDHIRLFESQLFPVCASDE 182 T + A + V+ + G SD + +H + +A + IR+ E ++ V Sbjct: 121 RTRVV-AENFSGCVEAILSGSSDFMLCYHHHTVPMIADDARYPSIRIAEDRMIAVSCPGL 179 Query: 183 HGEALFNL-AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTF-FVSSMSELLKQVALD 240 G+ F L PLL Y+R+S++G++ N+ + R + F + +S+ E LK ++ Sbjct: 180 DGQPRFTLDGTDTIPLLCYTRDSFLGKMTNQIIDRAGLRARCDFLYENSVGEALKSACVE 239 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 G GIAWLP A+++E+ G+L+ ++ + PI YR R ERFW Sbjct: 240 GLGIAWLPMAAVERELSEGRLIRVSTEAAENPISIRLYRSMERSRREVERFW 291 >UniRef50_B9JIP5 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JIP5_AGRRK Length = 296 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 150/299 (50%), Gaps = 23/299 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ET WL D L + NFS+AA +RNV+QPAF RRIRALE+ G+EL +R L+L+ Sbjct: 1 METVWLADLQALAETLNFSRAAENRNVTQPAFGRRIRALEEWCGLELVDRSTHRLKLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAEL-RGGSDYAQRKIKIAAAHSLSLGLLPS-------IISQ 122 G+I + +LE +L R +D + + AA H+LS P + S Sbjct: 61 GEIVLDAANDVANRLERVRQDLDRSRADSST--VTFAATHALSFVFFPGWIQGLGHVTST 118 Query: 123 MPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVC 178 MP + +++E + EG++ + + E+ L A F H+ L +L PVC Sbjct: 119 MPIRLL----SDNMNECEKIMLEGRAQFLLCHYHENSKIRLDAADFKHVELSTDRLIPVC 174 Query: 179 ASDEHGEALFNL-AQPHFPL--LNYSRNSYMGRLINRTLT-RHSELSFSTFFVSSMSELL 234 D G AL +L P+ + + S MGR++ L+ R EL T F S ++ +L Sbjct: 175 GKDGKGGALHHLPGTQEAPVAEIAFEEKSGMGRILASNLSPRLGELHLKTVFTSHLAMVL 234 Query: 235 KQVALDGCGIAWLPEYAIQQEIR-SGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 K +A+DG G+AW+PE E+ G+L DE + ++ R RM +AE FW Sbjct: 235 KALAVDGKGVAWIPESLAADEMGPKGRLAKAASDEWAVSVKIVLIRPRKRMTAIAEAFW 293 >UniRef50_Q5E4P1 Transcriptional regulator n=4 Tax=Vibrionaceae RepID=Q5E4P1_VIBF1 Length = 299 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 92/305 (30%), Positives = 160/305 (52%), Gaps = 26/305 (8%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 E KWL DF++L + NFS AA SR V+Q AFSRRI+ALE +GV LF+R P+ L+E G Sbjct: 3 EFKWLEDFMSLIELGNFSAAAKSRYVTQSAFSRRIQALELWVGVPLFDRSSYPIGLTEHG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAI 131 F +LL Q++ + S ++I HS ++ LLP++++Q + Sbjct: 63 NKFVPYAENLLNQIKVTKEDFSLASLKTDNTVRIVCLHSFAINLLPNLLAQFNNQLSHLN 122 Query: 132 EAID-----VDEAVDKLREGQSDCIFSFHDEDL-----LEAPFDHIRLFESQLFPVCASD 181 +I+ +D L + SD +F+++ + LE + LF+ ++ PV + D Sbjct: 123 ISINPSVQGIDNHFQTLLDDSSDLLFTYNMIGMRPSISLENKLEKHILFKEKIIPVISPD 182 Query: 182 EHGEALFNLAQPH-----FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQ 236 L + H +PLL+YS ++++ +++N+ LT+ + FS F +++SE L + Sbjct: 183 --------LLKNHEDNTPWPLLSYSEHTFLYKVVNQ-LTKSISVPFSQVFETTLSESLIE 233 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVV--LNRDELVIPIQAYAYRMNTRMNPVAERFWRE 294 +A++G G+AW+P +A+++E+ G LV + I + Y P +F E Sbjct: 234 MAINGIGVAWVPMHAVEKELIKGTLVTAFTEYSDWTIQLDVVCYHSKANSRPAVLQFLEE 293 Query: 295 LRELE 299 + L+ Sbjct: 294 IHSLK 298 >UniRef50_Q394R6 Transcriptional regulator, LysR family n=13 Tax=Burkholderia RepID=Q394R6_BURS3 Length = 332 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 91/295 (30%), Positives = 150/295 (50%), Gaps = 13/295 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DFL+L ++FS+AA +R+++Q AFSRRI ALE + +L +R + P+ L+ Sbjct: 1 MEAKWLEDFLSLADTKSFSRAARNRHLTQSAFSRRIAALETWMDAKLVDRSINPITLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYA--QRKIKIAAAHSLSLGLLPSIISQMP---P 125 G++F +L+ + + + G +A + ++ A AH+L L P + Q+ Sbjct: 61 GQMFRGLAADILRSMYAARNLVNGYDQFAASDQVVRFAVAHTLVFTLFPEWLKQLNGEVG 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDL--LEAP--FDHIRLFESQLFPVCASD 181 T + A++V E V +L EG+ D + +H L + P F + L ++ PV D Sbjct: 121 HVTARVNAVNVPEGVQQLVEGECDLLLGYHHPQLPIVLDPNHFPFVSLGVERILPVSTPD 180 Query: 182 EHGEALFNL-AQPH--FPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSELLKQV 237 G+ +F L P PLL YS +++G ++ L +E F + MSE LK + Sbjct: 181 ARGKPVFQLPGTPDAPLPLLAYSSGAFLGNIVEMLLLNATEPYVLHRCFETHMSEALKGM 240 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 + G GI WLPE + +E+ G LV + V ++ YR + AE+ W Sbjct: 241 VVAGHGIGWLPESCVAKELAEGTLVCAGSGDWVTELEIRLYRSARKRGLAAEQLW 295 >UniRef50_C6B2M0 Transcriptional regulator, LysR family n=2 Tax=Rhizobium RepID=C6B2M0_RHILS Length = 301 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 17/303 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL DF+ L RNFS AA +R+V+QPAFSRRIRALE IG L +R P++L+ Sbjct: 1 MELGWLEDFMELAAVRNFSTAAAARHVTQPAFSRRIRALENWIGAALIDRSSYPVRLTNA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G+ F R L++++ E R + + +A H+++L + P +++ Q F Sbjct: 61 GETFLESSRELMREIYRVRDECRQQARAGIEVLTFSALHTIALSIFPDLLTSVEQRTGPF 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFP------VCASD 181 + A D + V+ L G+ D F + E P F S++ V +D Sbjct: 121 ITRMHATDFYDCVESLALGRCDIAFCYSHE--FGPPVLQTGQFSSKVIRIDPFHLVSKAD 178 Query: 182 EHGEALFNLA----QPHFPLLNYSRNSYMGRLINRTL--TRHSELSFSTFFVSSMSELLK 235 + G + +LA PL+ YS + ++G++ + + + + SF + +SMSE +K Sbjct: 179 QRGNPVIDLATWPGNEDMPLVAYSSDCFLGKVQTQLMLDMQKTGRSFRVTYENSMSESVK 238 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 ++ L G GI WLPE + +EI +L +++ + + + A R + ERFW L Sbjct: 239 RMILAGKGIGWLPESSATREIERNELCIVDARQAEVTLNVLAIRKQGSGSAALERFWSNL 298 Query: 296 REL 298 + L Sbjct: 299 QGL 301 >UniRef50_B7H371 HTH-type transcriptional regulator cbl n=11 Tax=Acinetobacter RepID=B7H371_ACIB3 Length = 298 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/296 (27%), Positives = 161/296 (54%), Gaps = 13/296 (4%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR-QVTPLQLS 68 N+E +W+ D LTLE+ R+ S+AA R +SQ AF+RRI+ +E+ IG E+ R ++ + Sbjct: 2 NLEVRWVEDLLTLERERSISKAAEKRFISQSAFTRRIQQIEEMIGAEVIIRNNKNNIEFT 61 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL-- 126 + G+I +++ +Q+E ++ + + I+ HSL+ G L + + + P L Sbjct: 62 DIGRILLVMSKNIEKQVEETAKLIKNIKNEIESTIRFCVVHSLASGFLTTFLKKFPTLIR 121 Query: 127 -FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDH----IRLFESQLFPVCASD 181 I A + E + L+EG D + + D+ + D I++ E+ + PV A++ Sbjct: 122 DLKIEIVATNSGEGLSLLKEGACDFMICYADKSNIRKVGDDILSGIKIAETVIVPVSATE 181 Query: 182 -EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 +H + Q +F LL YS+++Y+ +L+++ + +L + T + + + LK++ L Sbjct: 182 PDHSPK--HTIQSNFALLAYSKHAYLRKLVDQLI--EGKLIYKTLYETDNATNLKELVLQ 237 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 G G+AW+P+ +++++ +GKLV+L++ E + Y ++ N N ++ W + Sbjct: 238 GLGVAWIPKINVEEDLAAGKLVILDQQEYCLAQDIYIFKNNLSDNKSVQKIWNGFK 293 >UniRef50_Q1BZ57 Transcriptional regulator, LysR family n=76 Tax=cellular organisms RepID=Q1BZ57_BURCA Length = 359 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 92/268 (34%), Positives = 141/268 (52%), Gaps = 13/268 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DF++L + R+FS++A R+VSQPAFSRRI+ALE + EL +R V P +L++ Sbjct: 39 MELKWLEDFVSLAETRSFSRSAELRHVSQPAFSRRIQALEAWLATELIDRSVYPTRLTQA 98 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLP----SIISQMPPL 126 G+IF+ Q +L Q LRG I+ A H+LSL P I ++M + Sbjct: 99 GQIFYEQALTMLSQAHEARTLLRGHVGAPVPTIEFAVPHTLSLTYFPRWLERIEAKMGQV 158 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDE 182 T + A++V +AV L EG D + +H L A +D + L + P A Sbjct: 159 HT-RLRALNVHDAVLSLVEGGCDLVMGYHHPSHPVALDPARYDMLILGSEPISPFSAPGR 217 Query: 183 HG---EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRH-SELSFSTFFVSSMSELLKQVA 238 G L A P L+Y+ N+Y+GR+ + + L + + M+E LK +A Sbjct: 218 AGRPRHTLPGAADARVPYLSYTPNAYLGRMTEVIIANAPTRLFLDRVYETDMAEGLKAMA 277 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNR 266 L G G+A+LP A+ + G+L+ L+R Sbjct: 278 LAGHGVAFLPHSAVDDAVAGGRLIRLDR 305 >UniRef50_A6GPQ8 Putative transcription regulator protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GPQ8_9BURK Length = 303 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 143/257 (55%), Gaps = 16/257 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ETKWL DF+TL + +NFS+AA R V+QPAFSRRI+ALE +G EL +R P +LS Q Sbjct: 1 METKWLEDFITLAQTKNFSKAANLRCVTQPAFSRRIQALEGWLGCELIDRGSYPTRLSPQ 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP------ 124 G++F+ Q +L+Q+ +RGGS +++ I++ H+L+ P + + Sbjct: 61 GEVFYEQALTMLEQIRQARTIVRGGSLQSRQPIRLVVPHTLACSKAPHWVRSLKTKLVDR 120 Query: 125 -PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLF-PVC 178 P ++ + A +V +AV +G SD + +H +L + F+ +R+ + F P Sbjct: 121 LPDLSFQLTASNVHDAVLYFTDGASDFLICYHHSREPIELDPSKFE-VRVLGIERFAPYS 179 Query: 179 ASDEHGEALFN---LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLK 235 A+ G +++ LA P L+YS+++Y+ ++ + + + F + MSE LK Sbjct: 180 AASAEGNPIYSLDPLAPLPVPYLSYSKHAYLSKMTDIAMEAGPLFLKKSLFETDMSESLK 239 Query: 236 QVALDGCGIAWLPEYAI 252 + G G+AWLPE A+ Sbjct: 240 SMCEAGLGVAWLPESAV 256 >UniRef50_C4ZM38 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM38_THASP Length = 301 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 149/296 (50%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DFL+L +FS++A R+VSQPAFSRRIRALE +GV L +R P +L+E Sbjct: 1 MELKWLEDFLSLADSGSFSRSAEQRHVSQPAFSRRIRALEAWLGVALVDRSTFPTRLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ F L+ +L + A +RG A + A H+L+ P+ + ++ F Sbjct: 61 GEAFKGPAADLIHRLHAARALVRGHQTTAGDALVFAVPHTLAFAFFPTWLGRLKAEFGEV 120 Query: 131 ---IEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCA---S 180 + A +V + V L EG D + +H L A F+ I+L ++ P + Sbjct: 121 PTRLIAGNVHDVVTMLVEGGCDLLLCYHHPTHPVWLDPARFEGIQLAVERVRPYLPRRLA 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSSMSELLKQVAL 239 G L A+ P L Y N+Y+ R+++ L R + + + + S M+E LK + L Sbjct: 181 RSAGWQLPGSAEAPIPFLRYGPNTYLRRMVDTILDRAAHPAHLALQYESDMAESLKAMLL 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G G+A+LP A+ +E+ G++VV E + ++ YR P R W+ L Sbjct: 241 AGHGLAFLPASAVAREVERGEVVVAGGPEWSLEMEVRLYRDRANTKPELLRLWQHL 296 >UniRef50_A9EZ85 Transcriptional regulator, LysR family protein n=7 Tax=Rhodobacterales RepID=A9EZ85_9RHOB Length = 307 Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 93/300 (31%), Positives = 143/300 (47%), Gaps = 24/300 (8%) Query: 15 WLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIF 74 WL DF L +NFS+AA RNVSQPAFSRRIRALE +GV+L NRQ PL L+ G +F Sbjct: 5 WLRDFEALTTHKNFSRAAEERNVSQPAFSRRIRALEDEVGVKLINRQTFPLSLTPAGDVF 64 Query: 75 HSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAI 134 SQ + +L+ L + + I+ A++ SL + + PL + Sbjct: 65 LSQAKIILRTYSETLERCQTIDAAGENVIRFASSQSL---YMTHFRDHIEPLMEAGGLDV 121 Query: 135 DV-------DEAVDKLREGQSDCIFSF-HDEDLLEAPF-----DHIRLFESQLFPVCASD 181 D+ D+ V L++ D I ++ H +P D++ L E + PV +D Sbjct: 122 DLNSTSWAADQFVTALQQRYCDVILTYWHPAMDFLSPLEVSKCDYLTLSEDEFIPVSKTD 181 Query: 182 EHGEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFV---SSMSELLK 235 G LF+L + PLL+Y S + +++ TL ++S V +S++ +K Sbjct: 182 ADGSPLFDLRRDPKRQIPLLSYGSASALRSVLDHTL--RQQISPPNLLVVNQNSLANSVK 239 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 + L+G G+ WLP + E+ G+L V + V P+ YR P WR + Sbjct: 240 AMILEGFGLGWLPRKLCEAELTEGRLAVAGGEAFVTPLSVRLYRETENSKPTLNSLWRRM 299 >UniRef50_A9CHQ5 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CHQ5_AGRT5 Length = 306 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 148/299 (49%), Gaps = 13/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DFL L NFS+AA R+V+Q AFSRRI+ LE +G L +R P +L+E Sbjct: 9 LEVKWLEDFLALAGTLNFSKAADERHVTQSAFSRRIKQLEAWVGATLVDRASYPSRLTEA 68 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM----PPL 126 G F + L+QL L R +++ A H+LS P + ++ PL Sbjct: 69 GAKFVPVAQETLKQLYHARRTLLQEEGADARTVRLTALHTLSFTFFPDWLKRVNEKAGPL 128 Query: 127 FT-WAIEAIDVDEAVDKLREGQSDCIFSFHDED---LLEAPFDHIRLFESQ-LFPVCASD 181 F+ ++ ++E ++ L +GQSD + ++ + LL+A R+ ++ + PV A Sbjct: 129 FSVLRPDSGSMEENLNSLVDGQSDFLLTYAHHEVPMLLDAQLFEFRVLGAENIIPVSAPT 188 Query: 182 EHGEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 + G L L A+ F L+Y + S+ G L+ R L + SMS LK +A Sbjct: 189 QDGAPLHALVENAKKPFAYLDYEKASFFGPLL-RDLLSARLPQYERVHEGSMSVGLKAMA 247 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 + G G+AW+PE ++QE+ SG LV I + YR PV ER W L + Sbjct: 248 MAGWGVAWVPESLMRQELDSGALVRAADPSFDITVDIRLYRSKENRRPVVERIWAVLED 306 >UniRef50_Q220G0 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q220G0_RHOFD Length = 301 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 149/294 (50%), Gaps = 13/294 (4%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 WL DF L NFS+AA R ++QPAFSRRIRALE +GV LF+R P L+E G+ Sbjct: 4 SWLLDFQALATSGNFSRAAADRAMTQPAFSRRIRALETWLGVTLFDRSTHPATLTEVGEW 63 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP-LFTWAIE 132 F ++ + +L ++ E R + + ++ AA H+LSL LP+ + + L +I+ Sbjct: 64 FRAEAQTILARVARVPDEARAVAASSSATLRFAATHALSLTFLPAWLRTLETRLAMGSIQ 123 Query: 133 AI-DVDEAVDKLR-EGQSDCIFSFHDEDLLEAPFD-----HIRLFESQLFPVCASDEHG- 184 + DV + + L +G++ + S H L+ D +++ L PV A + G Sbjct: 124 LVSDVLQQCEALMLQGRAQFMLS-HAHVLVPGRLDPGSYLSVKVGTDTLIPVAAGNGSGA 182 Query: 185 --EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSELLKQVALDG 241 L A PLL+YS S + R+I E T F + ++ +LK +ALDG Sbjct: 183 PRHCLGANADVRVPLLSYSDESGLARVIGALRGDALEKCGTETVFTAHLAAVLKSMALDG 242 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G+AWLP IQ E++ G+LV + + I + +R P AE FWR + Sbjct: 243 RGVAWLPVSLIQDELQDGRLVEAAQPDWRIELDIRLFRNQATAPPAAEAFWRAV 296 >UniRef50_B5QX35 LysR-family transcriptional regulator n=24 Tax=Gammaproteobacteria RepID=B5QX35_SALEP Length = 327 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/304 (29%), Positives = 154/304 (50%), Gaps = 12/304 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 H++E WL D L L++ NFS+A+ SR V+QPAFSRRI++LE+ +G LF R + L+ Sbjct: 24 HHLELTWLEDCLALKETLNFSKASASRYVTQPAFSRRIQSLEEWVGTPLFERSKRGVTLT 83 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ---MPP 125 + G++F Q+ L+ L + ++ + Q + +A H+LS +P ++ Q + Sbjct: 84 KAGEVFTDQLPELIHSLYTLKSDTLEAAGNKQPSLVFSATHALSFSFVPHLLKQSDKIAK 143 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLFPVCASD 181 ++ + + ++ +R+G S + H +L + F IRL L P D Sbjct: 144 FGSFRLLSDSLNACEKMMRQGDSQFLLCHHHPHMHLNLNKNNFMSIRLGFDTLIPFSKPD 203 Query: 182 -EHGEALFNLAQP-HFPLLNYSRNSYMGRLINRTLT-RHSELSFSTFFVSSMSELLKQVA 238 E + L+N+ FP L++S S +GR+I T + + + FV+ ++ L + Sbjct: 204 SETLKPLWNINNKIQFPYLSFSSQSGLGRIIANTASINRITHNINVAFVADLAATLLAMV 263 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDE--LVIPIQAYAYRMNTRMNPVAERFWRELR 296 G G+AW+P+ +Q+I + +V E L +PI+ YR RM P AE W Sbjct: 264 RSGDGVAWIPQSLARQDIEAKTIVTAAEKESNLWVPIEIRLYRPAKRMPPDAEELWEIFV 323 Query: 297 ELEI 300 E +I Sbjct: 324 EEQI 327 >UniRef50_A1TLZ5 Transcriptional regulator, LysR family n=2 Tax=Acidovorax RepID=A1TLZ5_ACIAC Length = 326 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 145/307 (47%), Gaps = 25/307 (8%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ +WL DFL L + NFS+AA +R ++QPAFSR IRALE +G ELF+R P L+ Sbjct: 8 LDLEWLEDFLALAESGNFSRAAEARAIAQPAFSRHIRALEDWVGAELFDRSAHPATLTAA 67 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP-LFTW 129 G+ F + +L +LE+ + A ++ AA H LSL P + + L Sbjct: 68 GQRFQPLLEDVLARLEAARIKACAAQAQAAASLRFAATHVLSLTFFPRWLGGLESQLRLG 127 Query: 130 AIEAI-DVDEAVDKLREGQSDCIFSFHDED-----LLEAPFDHIRLFESQLFPVCASDEH 183 I+ I D +A + L + H L EA + RL + L PV A Sbjct: 128 PIQTISDSYQACEDLAMQRRVQFVLCHGHAAVPGRLDEAGYPAARLADDVLQPVSAPQGD 187 Query: 184 GEALFNL--------AQPHFPLLNYSRNSYMGRLINRTLTR---------HSELSFSTFF 226 G L + A+P P+L YS S +GR++ R L + F Sbjct: 188 GTPLHAIPGPESQGGARPPLPVLAYSDASGLGRIM-RALRKGVFDAGGVAGMPGEVEVVF 246 Query: 227 VSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP 286 + + LLK +AL+G G+AWLP I +E++SG LV +P++ YR T M+ Sbjct: 247 TAHHAALLKAMALEGRGMAWLPRSLIAEELQSGALVAAGPAGWDVPVEIRLYRQRTEMSD 306 Query: 287 VAERFWR 293 AE WR Sbjct: 307 AAETLWR 313 >UniRef50_Q11AL0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11AL0_MESSB Length = 310 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 92/301 (30%), Positives = 143/301 (47%), Gaps = 13/301 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL DFL L + NFS+AA +R+V+QPAFSRRIRALE +G LF+R + L+ Sbjct: 1 MDLTWLEDFLALAETLNFSKAAATRSVTQPAFSRRIRALENWVGTALFHRTTHQVSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ F S+ +L++ L+ E S ++ AA H+LS P I F A Sbjct: 61 GEHFRSEAGNLVRGLQQLRRETAEASRRHVSRLSFAATHALSFTFFPRWIRNEDTGF--A 118 Query: 131 IEAIDVD----EAVDKLREGQSDCIFSFHDED-----LLEAPFDHIRLFESQLFPVCASD 181 E++ + EA ++ HD L F + + + L P+ A Sbjct: 119 TESVTLSSGTMEACGQMMLHGDVQFLLCHDHPASQSRLARPGFSSVVVGDDVLIPLSAPL 178 Query: 182 EHGEALFNLA-QPHFPLLNYSRNSYMGRLINRTLTRHSEL-SFSTFFVSSMSELLKQVAL 239 G ++L Q L YS S +GR++ +TR + F S ++ L +A Sbjct: 179 PSGLPKWSLENQAEARYLAYSDRSALGRIVADWITRCDDAPPLVQVFTSDLATTLMSMAC 238 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 G G+ WLP+ +I +LVV + IP+ YR +R++P+AE W L++LE Sbjct: 239 GGDGLVWLPKMLAGDQIDRSRLVVAGSNRFFIPVHIRLYRSTSRLSPMAEAVWSRLKKLE 298 Query: 300 I 300 Sbjct: 299 T 299 >UniRef50_Q21ZS2 Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21ZS2_RHOFD Length = 306 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 92/296 (31%), Positives = 146/296 (49%), Gaps = 17/296 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DFL+L NF+++A R +QPAFSRRIR+LE+ +G L R P+ L+ Sbjct: 1 MEVKWLEDFLSLADTLNFTRSAELRFTTQPAFSRRIRSLEEWLGAPLIERATQPISLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP----L 126 G+ F + +L++L ++R + I A HSLSL P I + L Sbjct: 61 GQKFRAIAEEVLRRLFQVREDVRHLDLASANTIIFTATHSLSLNFFPRWIRTVEERNGVL 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSF-HDEDLLEAPFDHIR---LFESQLFPVCASDE 182 FT +++ + V L +G + + H L P D R + +L PV E Sbjct: 121 FT-RLDSNHFEVCVQTLLKGHAHFMLCHAHRSVDLHLPPDGFRSIVVGGDRLLPVSTPHE 179 Query: 183 HGEALFNLA----QP-HFPLLNYSRNSYMGRLINRTL-TRHSELSFSTFFVSSMSELLKQ 236 G L QP H+ L Y+ S +GR ++ L R ++ FVS ++ +L+ Sbjct: 180 QGGPAHALPGTREQPAHY--LAYAETSAIGRAVDHMLEQRPAKPQLEQVFVSHLAAVLES 237 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 + DG G+AWLPE I+ ++ +G+LVV + +P++ +R + P +E FW Sbjct: 238 MVRDGRGLAWLPESQIKDDLSAGRLVVAGDESWTVPVELRLFRPEHSLPPKSEEFW 293 >UniRef50_B8IID1 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=B8IID1_METNO Length = 330 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 88/297 (29%), Positives = 136/297 (45%), Gaps = 17/297 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL DFL L +FS+AA R ++QPAFSRR+RALE+ +G LF R V P+ L+ Sbjct: 1 MDVAWLEDFLALVDLGHFSRAAEQRCITQPAFSRRVRALEEWVGTSLFTRDVLPVTLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL---- 126 G+ F L++L R A ++ A+ +LS+ P+ + + Sbjct: 61 GERFRPVAEETLRRLYQGREAAREAGRMAAATVRFASTQTLSVSFFPNWLKAVESFERVQ 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDED-----LLEAPFDHIRLFESQLFPVCASD 181 T + A + + G++ + HD L F +RL L PV A Sbjct: 121 ATVNLTAAHMAACEQMMLRGEAQFLLC-HDHPSTTHMLASDQFRSLRLGTDLLLPVSAPR 179 Query: 182 EHGE----ALFNLAQPHFPLLNYSRNSYMGRLI--NRTLTRHSELSFSTFFVSSMSELLK 235 G AL + PLL Y+ S +GR++ R + R SE S F S ++ +L Sbjct: 180 PDGTGPLFALPGTPKAPLPLLTYTGESGLGRILAGARAVER-SEASLKPVFASHLTSVLI 238 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 +A D G+ W P + ++ G+L+ + IPI+ YR R +P AER W Sbjct: 239 AMARDARGVTWAPMSVVADDLERGRLMRAGGADGDIPIEIRLYRPRARQSPAAERLW 295 >UniRef50_A9BZS3 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A9BZS3_DELAS Length = 331 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 105/320 (32%), Positives = 149/320 (46%), Gaps = 47/320 (14%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 +WL DFL L + NFS+AA +R+++QPAFSR IRALE+ +G ELF+R P L+ G+ Sbjct: 2 EWLEDFLALAESGNFSRAAEARSIAQPAFSRHIRALEEWVGAELFDRSAHPAALTAAGQR 61 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP-LFTWAIE 132 F + +L +LE+ + R D A ++ AA H LSL P + + L I+ Sbjct: 62 FQPLLEDVLAKLEAARIKARAAHDQAAASLRFAATHVLSLTFFPRWLGTLESQLRLGPIQ 121 Query: 133 AID------VDEAVDK-----LREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS- 180 I D+A+ + L G ++ L EA + ++L E L PV A Sbjct: 122 TISDSFHACEDQALQRRVQFVLCHGHAEV-----PGRLDEAGYPMLQLSEDMLLPVSAPW 176 Query: 181 -DEHGEALFNL--------AQPHFPL--LNYSRNSYMGRLINRTL--------------- 214 D G AL + QP PL L YS S +GR++ L Sbjct: 177 PDAPGRALHAIDAGSATGGGQP-LPLAVLAYSEASGLGRIMRSRLRGLFGAGGAGTAGEG 235 Query: 215 TRHSEL--SFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIP 272 EL T F + + LLK +AL+G G+AWLP I E+RSG LV+ +P Sbjct: 236 DGRPELPQGAQTVFTAHHAALLKAMALEGRGVAWLPRSLIVDELRSGALVLAGGHAWSVP 295 Query: 273 IQAYAYRMNTRMNPVAERFW 292 ++ YR M AE W Sbjct: 296 VEIRLYRQRADMADAAEALW 315 >UniRef50_D0ZGF0 Transcriptional regulator n=2 Tax=Edwardsiella RepID=D0ZGF0_EDWTE Length = 299 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 153/311 (49%), Gaps = 48/311 (15%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL DF++L++ NFS AA +RNV+QPAFSRRIRALE +GV LF+R P+ L+ Sbjct: 1 MDVKWLEDFISLQRLGNFSAAARARNVTQPAFSRRIRALEIWLGVPLFDRSSNPIALTPY 60 Query: 71 GKIFHSQIRHLLQQL---ESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 G+ F +L ++ + + A+L SD ++IA+ H+ ++ +LP ++ M Sbjct: 61 GEKFLPSAEDILARILDVKLDFAQLAIQSD---ETVRIASLHTFAVNMLPMLLDAM---- 113 Query: 128 TWAIEAIDV---------DEAVDKLREGQSDCIFSFH---------DEDLLEAPFDHIRL 169 A+E I V D + L E +D + + + D L++ H+ Sbjct: 114 GSALEGIKVVVNPGLQGIDNHFNTLLENSADLLMVYDIDGARPSAAEMDCLQS---HLLA 170 Query: 170 FESQLFPVCASDEHGEALFNLAQPH-----FPLLNYSRNSYMGRLINRTLTRHSELSFST 224 E+ L PV + LAQ H P L YS S++GR++ L RH+ Sbjct: 171 HET-LIPVISR--------ALAQRHPPGQPLPYLAYSDFSFIGRVVA-PLCRHAPQPLVK 220 Query: 225 FFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRD--ELVIPIQAYAYRMNT 282 + +SMSE LK + L G+AWLP + +E+ G L D L +Q Y+ Sbjct: 221 CYETSMSEGLKHMVLRDRGLAWLPLSMVHRELAQGVLCNAFPDYPRLSRCLQILLYKRRE 280 Query: 283 RMNPVAERFWR 293 P ERFW+ Sbjct: 281 SSRPAVERFWQ 291 >UniRef50_B8IQ92 Transcriptional regulator, LysR family n=3 Tax=Methylobacterium RepID=B8IQ92_METNO Length = 318 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL DFL L + R FS+AA RNV+QPAFSRRIRALE IG LF R L+ Sbjct: 1 MDLDWLKDFLALAEQRTFSRAAEVRNVTQPAFSRRIRALEDWIGTPLFVRGAQGAVLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G L + L+ E R + IAA H+LS P+ I ++ L Sbjct: 61 GAHLQPLAAELARSLDRARRETRAVGAAETATLSIAATHALSFTFFPAWIRRHLRVEVLG 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDL---LEAP-FDHIRLFESQLFPVCASDEH 183 T + + ++ + G+ + D+ ++A F R+ + L PVCA D Sbjct: 121 TLNLISDSLEACEQIMLAGEVHFLLCHTHPDVPLRVDADRFPSRRVGDDLLVPVCAPDAA 180 Query: 184 GEALFNLAQPHFP---LLNYSRNSYMGRLI-NRTLTRHSELSFSTFFVSSMSELLKQVAL 239 G L+ L P LL YS+ S +GR++ R R S + T F S ++ L +A Sbjct: 181 GAPLWPLPGPPGAPTRLLAYSQASGLGRILAAREADRPSGTALETVFTSHLAATLMSMAR 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 +G G+AWLP ++++ G+LV D IP++ +R NP A+ W ++ Sbjct: 241 EGHGLAWLPLTLAEEDLARGRLVRAGPDAFAIPVEITLFRAIGCRNPAADAMWAQV 296 >UniRef50_B7UYE4 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7UYE4_PSEA8 Length = 317 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 93/303 (30%), Positives = 143/303 (47%), Gaps = 16/303 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 I+ L DFL L + ++FS+AA +VS SRRI+ LEQ +G +F R L+L+E Sbjct: 2 IDLVMLKDFLVLCRIKSFSRAAQECHVSVSGLSRRIQTLEQWLGAPVFERHKHALELTEA 61 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ + ++ L++ +R + AQR+I+ A H LS P I ++ F A Sbjct: 62 GRQLQGVAQDAVRALDNLRQSIRERDEDAQRRIRFCAPHILSSVFFPHWIPRLQADFRSA 121 Query: 131 IEAIDVD---EAVDKLREGQSDCIFSFHDEDLL---------EAPFDHIRLFESQLFPVC 178 ++D D + + +LR+G D + + DE EA F + L QL VC Sbjct: 122 KFSVDCDYLPQCLSRLRDGSVDYVVALLDEGEAVSRRLGIDSEAEFQRLELGHEQLVAVC 181 Query: 179 ASDEHGEALFNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLK 235 A D G+ LFNL + L YS ++G + L R S L SS +E L+ Sbjct: 182 APDAAGQPLFNLDRLQTEALSFLGYSEECHLGWALE-PLLRDSGLFLQRHHSSSQTEGLR 240 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 A G+AWLP +++++ S +LV +P++ R + AER W L Sbjct: 241 FFAQSRLGVAWLPHTLVREDLASRRLVRAGGQRFDVPLRYTLIRRRLPLPGEAERLWTFL 300 Query: 296 REL 298 EL Sbjct: 301 GEL 303 >UniRef50_A3YCU0 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YCU0_9GAMM Length = 308 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 87/301 (28%), Positives = 151/301 (50%), Gaps = 15/301 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L DFL+L NF ++ R VSQPAFSRRI+ALE +G EL +R P+Q +E Sbjct: 1 MEIKLLEDFLSLCNSGNFRISSEQRFVSQPAFSRRIKALETWLGAELIDRTSYPVQPTEI 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ F + + +++ ++R + + K+ I+ ++L+ +P I ++ P Sbjct: 61 GREFKTTAQQIVRLAYQARNDIRAQTRGNEEKLCISTLNTLAQFFIPIWIKELNPYIDTE 120 Query: 131 IEAI-----DVDEAVDKLREGQSDCIFSFHDE---DLLEA-PFDHIRLFESQLFPVCASD 181 ++ VD + L EG D S+ D+ +L++ + + L L P+ + D Sbjct: 121 FLSVRTDFRSVDAYLSSLDEGIVDFFISYEDKYQFNLIDKEKYPSLLLGRESLVPIVSPD 180 Query: 182 EHGEALFNLA----QPHFPLLNYSRNSYMGRLINRTL-TRHSELSFSTFFVSSMSELLKQ 236 E+G + L+ QP P L YS ++ + R + L T + L + SS++ LK Sbjct: 181 ENGNPSWLLSGKNTQP-IPYLQYSVSTQLNRYVTHKLETSYKNLKLKPSYESSVTMNLKA 239 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 +AL+G G+AWLP I+ E++ G+L+ + I + +R P ++ W+ L Sbjct: 240 MALEGYGVAWLPLSIIKDELKDGRLMRADEISEDIQMMIKIFRYGDSTEPRVDKIWQVLV 299 Query: 297 E 297 E Sbjct: 300 E 300 >UniRef50_A6X3J9 Transcriptional regulator, LysR family n=2 Tax=Ochrobactrum RepID=A6X3J9_OCHA4 Length = 313 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 18/302 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DF++L + R++S+AA RN++Q A S+RI+ LE +G+ L +R P+ L++ Sbjct: 1 MELKWLEDFVSLAEHRSYSRAAGDRNITQSALSKRIKQLEDWVGLPLIDRSSNPICLTKA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ F + + L+ L S + G I A ++LSL P ++Q+ + Sbjct: 61 GECFLPRAQDALEMLLSARKSVSDGYSATWEIISFATLNTLSLTFFPHWMAQIEASGA-S 119 Query: 131 IEAIDVDE------AVDKLREGQSDCIFSFHD------EDLLEAPFDHIRLFESQLFPVC 178 A D + L G D ++ +DL PF + L ++ PV Sbjct: 120 FRARFADPHSSFVGNISTLVSGHCDFFLTYAHPAVPQMDDLGGYPF--LALGTERVIPVS 177 Query: 179 ASDEHGEALFNLAQPHFPL--LNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQ 236 A +G+AL +L + P+ L+Y NS+ + +H +T + + MS LK Sbjct: 178 APAPNGQALHSLKEKSLPIDFLSYRGNSFFSLALPWLFEKHG-FELNTVYENGMSVALKA 236 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 +A+ G G+AW+PE + E++ G LV + I+ YR N AE FWR Sbjct: 237 MAVSGHGVAWIPESLVDDELKRGVLVRAGETNTDLLIEIRVYRTPQFRNKQAELFWRRAS 296 Query: 297 EL 298 +L Sbjct: 297 QL 298 >UniRef50_Q7W3G8 LysR family regulatory protein n=2 Tax=Bordetella RepID=Q7W3G8_BORPA Length = 330 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 168/315 (53%), Gaps = 34/315 (10%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 H ++ W+ DFLTL FS+AA RNV+QPAFSRRI+ LE +G+EL +R+ L+L+ Sbjct: 11 HAMKQLWIEDFLTLVDAGTFSRAAALRNVTQPAFSRRIQQLEGWLGLELIDRRSPTLRLT 70 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQR---KIKIAAAHSLSLGLLPSIIS---- 121 + R LL+ ++A+LR Q ++ +A HSL++ LP++++ Sbjct: 71 PVAQRHIPGFRMLLR----DMAQLRTRMQSEQNGLARLVLATQHSLTMSRLPALLTLLGE 126 Query: 122 QMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDED--LLEAPFDHIRLFESQ--LFPV 177 Q P +++ + + D+ V G++D + + + L H+RL Q L P+ Sbjct: 127 QDSPRIEFSVRSENRDDCVALFLRGEADLLLCMEERNDALYRLVPAHLRLPVGQEVLVPL 186 Query: 178 CASDEHGEALF--NLAQPHFPLLNYSRNSYMGRLINR----TLTRHS--ELSFSTFFVSS 229 A +G AL +P LL + +S++GR++ L +H E+ + F++ Sbjct: 187 SAPARNGRALHAPRRGKP-LSLLAFPPDSFLGRVMYEQSFTALLQHCKVEIVHESVFLAG 245 Query: 230 MSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLN-RDELVIPI--QAYAYRMNTRMN- 285 +K++ L G G+AWLP I++E+++G LV+L+ R+E + P+ Q YR NT N Sbjct: 246 ----VKEMVLAGLGMAWLPLSLIEREVKAGALVMLDAREEYLQPVTLQLGLYR-NTHSNY 300 Query: 286 PVA-ERFWRELRELE 299 P A +R W LRE E Sbjct: 301 PEAIDRLWTLLRESE 315 >UniRef50_Q12HA4 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12HA4_POLSJ Length = 300 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 90/297 (30%), Positives = 141/297 (47%), Gaps = 20/297 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL DF+ L + R+FS+AA R+V+QP FSRRIRALE G +L NR PL L+ Sbjct: 1 MDHKWLEDFIVLARERSFSRAAELRHVTQPQFSRRIRALELWAGADLINRASMPLGLTAA 60 Query: 71 GK----IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--- 123 G+ + H L + + RG D+ + +A +LS +P ++++ Sbjct: 61 GEELLPVAHRAAAS-LNDARARIRHARGSLDW----VTLATGRTLSRTAVPDWLARVKRS 115 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL----EAPFDHIRLFESQLFPVCA 179 F I + E L +G +D + SF L E F+ I L +L V A Sbjct: 116 AGEFRLRILTGSIHEGATALEQGAADFLLSFTHPRLPLLLDEQTFEGITLGTDELVAVSA 175 Query: 180 SDEHGE---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMSELLK 235 G+ AL + P+L Y+ + +++ L+R S EL T S +E L Sbjct: 176 PRGDGQPRHALPGTDRHPVPVLGYAPTLALSQILQDGLSRSSRELHLHTVTESDFAESLH 235 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 + AL G G+AWLP + ++RSG+LV + + + YR + N + +R W Sbjct: 236 EQALQGVGMAWLPRGLVDGDLRSGRLVEADGKGAAVRFEIRLYRPRSPRNDLVQRIW 292 >UniRef50_B8IFG1 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=B8IFG1_METNO Length = 300 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 80/280 (28%), Positives = 137/280 (48%), Gaps = 22/280 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DF++L + +FS++A R+V+Q AFSRRI+ALE +GV L +R P L+ Sbjct: 1 MELKWLEDFVSLARTGSFSRSAEERHVTQSAFSRRIQALETWLGVSLIDRSTYPTTLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLP----SIISQMPPL 126 G+ F ++ L + A L+ + +++ + +AA H+L+L P I + PL Sbjct: 61 GREFREMAEEAVRMLHGSRAALQASARPSKQTVAVAALHTLALTFFPRWFRQIEAHTGPL 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG-- 184 + + D + + EG D + +FH + P L + +P C Sbjct: 121 GSRLLPD-DFHNCIQAVAEGGYDFLLTFHHPSV---PI----LLDPAQYPYCVVGADSLV 172 Query: 185 ---EALFNLAQPHFPLLNYSRNSYMGR--LINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 A PLL+Y++NS++GR ++ + S ++M+E LK +AL Sbjct: 173 AVRSAARTDGSASLPLLSYAQNSFLGRVAIVAQAQAGEPPAGISHTNENAMAEALKFMAL 232 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR 279 +G G+AWLP + +E+ G L+ + P++ YR Sbjct: 233 EGHGLAWLPRSLVVRELAEGSLIAEGEE---TPLEVRLYR 269 >UniRef50_B6A503 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A503_RHILW Length = 297 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 79/295 (26%), Positives = 145/295 (49%), Gaps = 18/295 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T WL DFL + + +F++AA RNVSQPAFSRRI+ LE IGV LF R + L+ Sbjct: 1 MDTDWLVDFLAVIESGSFTKAANQRNVSQPAFSRRIQTLENWIGVPLFERGTHSVTLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 G+IF +Q + +++ + + S ++ +++ H+LS L+PS++ ++ FT Sbjct: 61 GEIFRTQAQEMIELVNVSRTRALAASTRSRNSVQLVCTHTLSFTLVPSLLQRLLRDFTEQ 120 Query: 129 --WAIEAIDVDEAVDKLREGQSDCIF----SFHDEDLLEAPFDHIRLFESQLFPVCASDE 182 I A + + V +R+G S I + HD D + + L VC +D Sbjct: 121 PAVTISACTMADCVRSIRDGNSSFIVYHYHNDHDCDFGGKRMRSLDIGSEWLTLVCRAD- 179 Query: 183 HGEALFNLAQPH--FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 +++ P P + Y S ++++ H + + +++++ + + Sbjct: 180 ----VYDTLAPGEPLPFIQYGDESAFKKIVHDNPV-HPDRPVVEVYRATLAQTVATAVRN 234 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G G A+ + ++++SG+LV L ++ + I+ R +R N ER WR L Sbjct: 235 GIGAAYCLRSLVLEDVQSGRLVKLPAPDIALSIRISMPR--SRQNETCERLWRAL 287 >UniRef50_Q2SL06 Transcriptional regulator n=3 Tax=Oceanospirillales RepID=Q2SL06_HAHCH Length = 312 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 18/304 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +WL DF+ L K R+FS+AA +NV+QP FSRRI+ LE+ +GV+L +R PL L+ Sbjct: 1 MEIRWLEDFIALAKTRHFSRAADEQNVTQPTFSRRIKLLEEEMGVQLVDRNTLPLSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G++F + + L E + ++ A +L L + + A Sbjct: 61 GELFLDAADKITRILRDTREECHAIHEEQSSRLVFATTQTLYLSFYKTWLEPFSRALDIA 120 Query: 131 IE------AIDVDEAVDKLREGQSDCIFSFHD------EDLLEAPFDHIRLFESQLFPVC 178 ++ A V + L E Q D + + D F+++++ +L P Sbjct: 121 LDLNLHSTAWTVRDFSHALLEQQCDIMLCYWHPSIELLADATPNEFEYVKIAGERLLPCS 180 Query: 179 ASDEHGEALFNLA----QPHFPLLNYSRNSYMGRLINRTLTR-HSELSFSTFFVSSMSEL 233 + DE G F L +P P ++Y N+++ +++ T+T ++L T + S Sbjct: 181 SVDETGAPKFVLPGHKRRP-IPFIDYHDNAFLKPVVHHTITHSQNDLHLVTVNKNFHSVS 239 Query: 234 LKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 +K + +G G+ W+P Q+ IR G++ + ++ YR +P E+ W Sbjct: 240 VKAMIREGFGVGWIPFRLAQESIRYGRMKAAGDERYYTDLEVRFYRKKDNKHPSLEKLWN 299 Query: 294 ELRE 297 +L+E Sbjct: 300 KLKE 303 >UniRef50_C6B5Y5 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B5Y5_RHILS Length = 305 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 23/299 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T WL D L NFS+AA RN++QPAF RRI+A E G L +R ++++ Sbjct: 1 MDTAWLLDLRALADTLNFSRAAELRNITQPAFGRRIKAFEDWSGSVLVDRSTHRIRITPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRK-----IKIAAAHSLSLGLLPSIISQM-P 124 G+I +LQ++E R D Q + + AA H+LS P + + Sbjct: 61 GEIMLDAANDILQRIE------RATHDLNQERSATATLTFAATHALSFTFFPGWVQSLGS 114 Query: 125 PLFTWAIEAI--DVDEAVDKLREGQSDCIFS-FHDED---LLEAPFDHIRLFESQLFPVC 178 + T I + +++E + EG++ + FH + L EA F ++ L L PV Sbjct: 115 SVATVPIRLLSDNMNECEKMMAEGRAQFLLCHFHPDSEIRLHEADFKYMELASDVLVPVA 174 Query: 179 ASDEHGEALFNL-AQPHFPL--LNYSRNSYMGRLINRTLTR-HSELSFSTFFVSSMSELL 234 + G + L P P+ +++ S MGR++ L+ SEL F S ++ +L Sbjct: 175 RRGKEGAPIHKLPGTPEIPVPHISFDEKSGMGRILAANLSPVESELHLVRVFTSHLAMVL 234 Query: 235 KQVALDGCGIAWLPEYAIQQEIR-SGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 K +AL+G G+AW+P E+ G L V + ++P++ R TRM +AE+FW Sbjct: 235 KALALEGKGVAWIPRSLASSELEPEGNLAVAGDERWMVPVKIVLIRSRTRMTELAEKFW 293 >UniRef50_B1JFP7 Transcriptional regulator, LysR family n=4 Tax=Pseudomonas RepID=B1JFP7_PSEPW Length = 297 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 90/296 (30%), Positives = 142/296 (47%), Gaps = 24/296 (8%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL D L + +F +AA +R+V+QPAFSRR+R+LE +GVELF R L+E Sbjct: 1 MELVWLEDLSALAEYGSFVRAAEARHVTQPAFSRRVRSLENWMGVELFVRSPHGATLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPPL 126 G+ + + L +E + + A R ++ AA HSLS P + S P Sbjct: 61 GRHILPSAQEAARSLYRIRSEAQEVAGVAARSLQFAATHSLSFTFFPKWLRSSESGAP-- 118 Query: 127 FTWAIEAIDVDE---AV--DKLREGQSDCIFSFHDEDL--LEAP--FDHIRLFESQLFPV 177 IEA+ + AV L GQ + D+ L AP F ++ E L P+ Sbjct: 119 ----IEAVQLHSDSMAVCEQMLIHGQVQFLLCHRHPDVPPLLAPEQFTSKKVGEDTLVPL 174 Query: 178 CASDEHGEALFNLAQPHFPLLNYSRNSYMGRLI-NRTLTRHSELSFSTFFVSSMSELLKQ 236 ++ A F + P L Y+ S +GR++ +R + L F S ++ +L Sbjct: 175 ASA----RADFGTSPAALPYLAYTHESGLGRIVAHRLRGKEDYLHLKPLFTSHLAAVLMS 230 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 +AL+ G+AWLP+ +QEI G+L+ + IP++ + R ++ AE FW Sbjct: 231 MALESKGVAWLPKSLTEQEILDGRLIRALDESWDIPLEIHLTRPKATLSQSAETFW 286 >UniRef50_D0SM30 LysR family transcriptional regulator n=2 Tax=Acinetobacter RepID=D0SM30_ACIJU Length = 296 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/282 (27%), Positives = 144/282 (51%), Gaps = 29/282 (10%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +W+ D L LE+ ++ SQAA R+V+Q AFSRR++ +E A+G + +R+ + +E Sbjct: 3 LEIRWIEDLLALEQEKSISQAAEIRHVTQSAFSRRLQNIENALGFPILDRKSKNIDFTEA 62 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 G+I + +++ QL S + L + K A +HSL P I ++ + Sbjct: 63 GQILLATAKNIHNQLSSTITYLEKNIKNNELNTKFAVSHSLITQFFPRFIHELSEDLSDL 122 Query: 129 -WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLE----APFDHIRLFESQLFPVCASDEH 183 I A ++ + + L +G D + + D+ L + F ++ + ++ PV Sbjct: 123 KLEIIAANLKQGMRLLTDGSCDFLICYCDQKTLAQMDFSLFLFHKIVKMEILPVT----- 177 Query: 184 GEALFNLAQPH------FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQV 237 AL+N QP FPLL+YS+ +Y+ + ++ + ++L++ + + + LK++ Sbjct: 178 --ALYN-NQPKYSFNELFPLLSYSKQAYLRKCVDDII--ENQLNYRILYETDNASDLKEL 232 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR 279 L G GIAWLP+ +++EI KL V V PI + Y+ Sbjct: 233 VLQGLGIAWLPKLLVEKEIAENKLKV------VEPINFHIYQ 268 >UniRef50_Q5LKU8 Transcriptional regulator, LysR family n=6 Tax=Rhodobacterales RepID=Q5LKU8_SILPO Length = 294 Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 78/300 (26%), Positives = 144/300 (48%), Gaps = 21/300 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL DF L + NF++A+ RN++Q AFSRRI++LE +G+ L R P+QL+E Sbjct: 1 MDINWLRDFTCLARTLNFTRASEERNITQSAFSRRIKSLENWLGIPLIKRSTYPVQLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ F + + L LR + A H++S+ L I++ L Sbjct: 61 GQQFLPVAQETIASLTDIRQVLRAQEQGVTAFQRFAVLHTISVNYLTRRIAEFEDL---- 116 Query: 131 IEAIDVDEAVDKLR-------EGQSDCIFSFHDEDLL----EAPFDHIRLFESQLFPVC- 178 I + V D LR +G D + + +D+ E F + ++PV Sbjct: 117 IPNLRVRVYSDNLRTCCQLLSDGTCDFLLYYRHQDVQPVFEEKQFARKDIGVELMYPVAE 176 Query: 179 --ASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTL-TRHSELSFSTFFVSSMSELLK 235 A+ G L + P L+Y +S++G ++++T+ TR L+ ++ +++E +K Sbjct: 177 TGAARAGGWDLDGDGRQPIPYLSYDPSSFLGTVVDQTIGTRTPPLAIR--YMDALTEAIK 234 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 + L G G+AWLPE I +E+ +G++ ++ + P+ + R++ ++ W L Sbjct: 235 RRVLSGSGMAWLPESVIAEELAAGRVTIIGGPDWQAPLTLSLFCSRDRLDETGQKVWNAL 294 >UniRef50_A4EX76 Transcriptional regulator, LysR family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EX76_9RHOB Length = 300 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 80/287 (27%), Positives = 141/287 (49%), Gaps = 9/287 (3%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 +W+ D L + K + +QAA +R+ +Q AFSRRI ALE +G ELF+R+ PL+ Sbjct: 4 EWIEDILAVLKTGSLAQAAEARHRTQSAFSRRIAALEAYLGTELFDRKAKPLRPLPNVLA 63 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--TWAI 131 +++R L+ +L+S L GS ++ + IA +HSL+ P ++ ++ F + ++ Sbjct: 64 QEAEMRELVMRLQSLEQSLSAGSKSRRKTLTIAGSHSLATTQAPRLVEEIHAEFGLSVSV 123 Query: 132 EAIDVDEAVDKLREGQSDCIFSFH----DEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ D D+A+ L G++D F +E L D + + L PV A + L Sbjct: 124 QSADRDQAILSLLSGEADFALFFQSAQSNEVLGRLDVDVAPMGQDLLLPVAAP-PLWQRL 182 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTR--HSELSFSTFFVSSMSELLKQVALDGCGIA 245 + + +PL+ Y ++ + GRL+++ + + + +S + Q+ L G GI Sbjct: 183 QSQPRAPYPLITYPKDVFFGRLVSQKMAPLLMEDRPMDVVASTPLSHAVLQLVLQGTGIG 242 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 WLP+ I ++ G L VL IP+Q RM + W Sbjct: 243 WLPQSLISDQLDQGLLRVLPDPLPDIPLQLVLVRMAKMQKSENAKVW 289 >UniRef50_A8LJG0 Transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LJG0_DINSH Length = 310 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/284 (27%), Positives = 131/284 (46%), Gaps = 10/284 (3%) Query: 18 DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQ 77 D L + NFSQAA N+SQPAFSRRI++LE+ +G L +R P+ L+E G Sbjct: 14 DLDRLRQTGNFSQAAALVNLSQPAFSRRIKSLEKWVGAVLVDRSRQPVVLTEAGTQMLEA 73 Query: 78 IRHLLQQLESNLAELRGGSDYAQRK-IKIAAAHSLSLGLLPSIISQM----PPLFTWAIE 132 L ++E +++R + + A HS+ P+ + + P+ + + Sbjct: 74 GMQALARIEQERSQIREAQSLPDKYVVTFATQHSIGWRFYPAWLQALEEAYGPILS-RLR 132 Query: 133 AIDVDEAVDKLREGQSDCIFSFHDEDLL-EAPFDHIRLFESQLFPVCASDEHGEALFNLA 191 A D+ ++ L++G D + ++ ++ +A +R+ L PVC D G +++ A Sbjct: 133 ADDLPNCLNDLKQGAVDFVIAYASAEIRPQAGQPGVRIGSDDLIPVCKPDGAGAPIYDCA 192 Query: 192 QP--HFPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSSMSELLKQVALDGCGIAWLP 248 P L + + +G + H S F T + +SM+ L+ A G G+AWLP Sbjct: 193 AAGVRMPFLRFGDAAPIGMHLEPLFAAHGLRSRFRTVYENSMAGALRIRARAGDGVAWLP 252 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 + ++ G LV + IP++ YR R N V W Sbjct: 253 HSLVAPDLAGGLLVRTGPPDWDIPLEILIYRNAERSNRVTRALW 296 >UniRef50_Q1QWD8 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWD8_CHRSD Length = 306 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 29/306 (9%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +WL DF+ L + R+FS+AA ++NV+QP FSRRI+ LE+ +G L NRQ PL L+ Sbjct: 1 MEIRWLEDFIVLARERHFSRAADAQNVTQPTFSRRIKLLEEEMGTTLINRQTLPLSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ------MP 124 G+ F + + +++ L+ + R+I +AA SL ++P + + + Sbjct: 61 GEEFLALCEQITERVRLTRDRLQSIAADEARRILLAAPQSLLSNVVPGWLERHDLAHCVS 120 Query: 125 PLF---TWAIEAIDVDEAVDKLREGQSDCIFSFH-------DEDLLEAPFDHIRLFESQL 174 P +W I + + L G+ D + D D+ E F + L E QL Sbjct: 121 PYLRATSWLI-----GDYLHGLERGECDLALCYWPRGRIALDLDVSELTF--LTLGEEQL 173 Query: 175 FPVCASDEHGEALFNLA----QPHFPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSS 229 PV A D G F L QP PL+ + M + L R E + +T S Sbjct: 174 VPVSAPDGTGRPRFALPGTRRQPQ-PLIAFHPRGLMAAALEAHLHRQPEPVYLTTLNESV 232 Query: 230 MSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAE 289 + ++++ G G+ W+P+ +++ +++G+LV +P+ Y +P Sbjct: 233 QATNIRELVTQGYGLGWIPQRSVRTAMQNGELVRAGDARWDVPLDIRLYARRDSRHPGLP 292 Query: 290 RFWREL 295 W++L Sbjct: 293 GLWQQL 298 >UniRef50_Q5LQ40 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LQ40_SILPO Length = 296 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 90/288 (31%), Positives = 140/288 (48%), Gaps = 20/288 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T+ L D L L + N + AA RNV+QPAFSRRIR+LEQ IG +L R ++LS Sbjct: 1 MDTRLLEDALILLEEGNLTAAAARRNVTQPAFSRRIRSLEQWIGTDLLVRGANRVELSPA 60 Query: 71 GKIFHSQIRHL---LQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 QIR L LQQ++ L + GG+D + + HSLS+ +P +I Sbjct: 61 LAKCEPQIRALLSQLQQVQGQLKDPEGGADV----LHVVTQHSLSVSAIPELIRVANSAG 116 Query: 128 T-WAI--EAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFD-----HIRLFESQLFPVCA 179 T W + + DEA+ + D + + L APFD ++ ++ + V Sbjct: 117 TRWHVRLHTRNQDEAMSMFLRHEVDVLVGYDYRVLPLAPFDSSVTRYVWRRDAFVPVVGG 176 Query: 180 SDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFV--SSMSELLKQV 237 + H N+ P P ++Y + S G++++ + + LS V S+ S + Q+ Sbjct: 177 ALRHRLKDGNVLPPDTPRISYPKGSLFGQIVSH-YNKDAALSLDGPVVVESTFSVGIAQL 235 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIP--IQAYAYRMNTR 283 L G G AW+P I +I SG++V+L+ IP I YA N R Sbjct: 236 VLSGIGAAWVPHSLIHDQIISGEVVILSPGYGRIPMDIALYARTDNKR 283 >UniRef50_D2TPN0 LysR-family transcriptional regulator n=3 Tax=Citrobacter RepID=D2TPN0_CITRO Length = 298 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 19/265 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL DFL L + N+S AA +R+++QPA SRRI+ALE+ +GV LF+R TP+ L+ Sbjct: 1 MDCKWLEDFLALSQHGNYSLAATARHITQPALSRRIKALEEMLGVPLFDRTTTPVTLTRY 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G+ F R +L L EL + + + H+LS+ +LP +I+ Q P Sbjct: 61 GERFEPYARQVLSSLTEARQELAAMCPATDDTLVMVSLHTLSVNILPDMINYLRQSEPQL 120 Query: 128 TWAIEAI--DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLF------PVCA 179 + + A +D + L + Q D + ++ D + D + L+ PV + Sbjct: 121 NYTVNASIQGIDNHFNALIDRQIDILVTY-DIPSSQPGLDIAGKLKRSLWRYERFIPVIS 179 Query: 180 SDEHGEALFNLAQPH--FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQV 237 +D E L + PH P L YS +++ R+I+ R F S +SE +K++ Sbjct: 180 AD-IAEVLDD---PHAQIPWLCYSDYTFVRRIIDPAEQR-VRPRLKKVFESGLSETIKEM 234 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLV 262 + G+AWLPE + + + + +++ Sbjct: 235 VMRHMGMAWLPESMVAEALVNREVI 259 >UniRef50_A6UJW6 Transcriptional regulator, LysR family n=4 Tax=Rhizobiales RepID=A6UJW6_SINMW Length = 313 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 23/309 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DF+TL +FS+AA RNV+QPAFSRRI+ LE +G L +R P +L+ Sbjct: 1 MEIKWLEDFVTLADTSSFSRAAELRNVTQPAFSRRIKQLENWLGATLISRATMPAELTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL-FTW 129 G+ F + ++ + LR ++ I+ AA H+L++ P + ++ T+ Sbjct: 61 GRNFLPVAQESIRTFYAAREVLRLPNEPGL--IRFAALHTLTVTFFPRWLKKLEAAGGTF 118 Query: 130 AIEAI----DVDEAVDKLREGQSDCIFSF-HDE---DLLEAPFDHIRLFESQLFPVCASD 181 + I ++ +D L ++D ++ H E L F + + +L P+ A++ Sbjct: 119 STSLIPDRGGIEANLDALIGDEADFFLTYAHAEVPFHLARGQFASLTVAHDRLIPLVATE 178 Query: 182 ----EHGEALFNL-----AQPHF--PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSM 230 H + NL AQP P L+Y NS+ G ++R L R T +++ Sbjct: 179 IVLSGHAQPGRNLLDRAVAQPRLAIPYLSYGLNSFFGVALSRLLLRRPPFRRRTTHENTI 238 Query: 231 SELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDE-LVIPIQAYAYRMNTRMNPVAE 289 S L +AL G G+ WLPE ++E+ +G+LV + DE + ++ YR N E Sbjct: 239 SAGLMNMALTGAGLCWLPESLAREEMEAGRLVPASADEGWNLDLEIRLYRHAAGRNRKVE 298 Query: 290 RFWRELREL 298 W+ ++L Sbjct: 299 DLWQTAQQL 307 >UniRef50_B2UG98 Transcriptional regulator, LysR family n=4 Tax=Burkholderiaceae RepID=B2UG98_RALPJ Length = 307 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 17/296 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL DF L K R+FS+AA +RNV+ PAF RRI+ALE+ +G L R P+ L+ Sbjct: 1 MQIKWLEDFKELAKTRSFSRAAENRNVTHPAFGRRIKALEEWVGTALVERSEHPVTLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKI--KIAAAHSLSLGLLPS---IISQMPP 125 G++F + + L LR AQ + +I +L+ +P +++ Sbjct: 61 GRLFLDAAANAVDGLNDARLLLR----EAQLPVALRIGTGRTLARTFVPGWYETLARQRG 116 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHD--EDLLEAP--FDHIRLFESQLFPVCASD 181 +F ++ E V L +G D + ++ D L P +DH L L PV A D Sbjct: 117 VFPLSVTTGGTQEGVLALADGTVDLLIAYASPQADALLDPRKYDHCLLGSETLVPVSAPD 176 Query: 182 EHGEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSSMSELLKQV 237 + G F L A P L ++R + ++++ L + F + E ++++ Sbjct: 177 KRGRPRFTLPGSAAAPLPWLAFARGLTLRQMLDSHLAAADRKAHLQPVFQADFYEAVEEM 236 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 AL G G+AWLP + + +G+L D I + R+ + + + + W+ Sbjct: 237 ALRGFGMAWLPYRLARPHLNAGELRPAGDDAWHIHVNIRMMRVRSNQSALLDEVWQ 292 >UniRef50_Q46VM9 Transcriptional regulator, LysR family n=4 Tax=Cupriavidus RepID=Q46VM9_RALEJ Length = 350 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 25/307 (8%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + +WL DF+ L + + ++AA RNV+ PAF RR++ALE G L +R P++L+ + Sbjct: 35 MHIRWLEDFICLAQAGSLARAAELRNVTPPAFGRRMQALEVWAGAPLIDRSAFPVRLTAE 94 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL---- 126 G+ F ++ LQ LE LR + IA +L+ ++P+ ++ + + Sbjct: 95 GRQFLEAAQNALQTLEDARLALRTAHRADASTLTIATGKTLARSMVPAWLAGLRRVLGHD 154 Query: 127 -----FTWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPV 177 F + + +A+ EG +D + + D L +A + + +L V Sbjct: 155 KAAAGFRTRLSTFPMHDALAMFTEGDADFLLCYSPPDIPVMLDDARYRFHMVGVERLVCV 214 Query: 178 CASDEHGEALFNLAQPH-------FPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSS 229 A+D G F L P++ Y+ + +GR++N+ + R S VS Sbjct: 215 SAADARGAPEFRLQAAKGGARTAPTPMIAYADSLTLGRMVNQEIARRKLASRLDVIAVSD 274 Query: 230 MSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVL----NRDELVIPIQAYAYRMNTRMN 285 +E + ++ G+AWLP I ++ +G+LV + +E+ + ++ YR M Sbjct: 275 FAESVHEMVRQRMGLAWLPARLIADDLHAGRLVRATAGRSAEEVDLALEIRLYRQRAPMR 334 Query: 286 PVAERFW 292 P+AE FW Sbjct: 335 PLAEAFW 341 >UniRef50_C9YBU0 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBU0_9BURK Length = 295 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 94/149 (63%), Gaps = 5/149 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ETKWL DF++L + R+FS++A R+V+QPAFSRRI++LE G +L +R P +L+ Sbjct: 1 METKWLEDFVSLAETRSFSRSAQLRHVTQPAFSRRIQSLEAWAGTDLVDRSSYPTRLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM----PPL 126 G+ + Q +LQ L+S A LRG + AQ ++ A H+L+ P+ +S++ PL Sbjct: 61 GETLYDQSLEVLQALQSTRAMLRGHTTAAQDVVEFAVPHTLAFTFFPAWVSELREKFGPL 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFH 155 + I A++V +AV +L EG D + ++H Sbjct: 121 KSRLI-ALNVHDAVMRLVEGSCDLLIAYH 148 >UniRef50_A6FPF9 Transcriptional regulator, LysR family protein n=3 Tax=Rhodobacteraceae RepID=A6FPF9_9RHOB Length = 294 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/290 (26%), Positives = 134/290 (46%), Gaps = 16/290 (5%) Query: 15 WLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIF 74 WL D L + +F++AA +RN++Q AF+RRIR++E IG LF+R P+QL + Sbjct: 5 WLEDILAVLDTGSFARAAEARNLTQSAFTRRIRSIEDGIGTPLFDRSRKPVQLLAAVRTR 64 Query: 75 HSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAI 134 ++R + L + LR + A R + +A H+++ + P ++ + + + Sbjct: 65 EDEMRRMAADLRALRDGLRRSAAGAGRTVALACQHAITTTVSPRLVQILARDRAVRVRSG 124 Query: 135 DVDEAVDKLREGQSDCIFSFHDEDLLEAP----FDHIRLFESQLFPVCASDEHGEALFNL 190 + D+ + +L G+ D + P F+ + + L VCA AL L Sbjct: 125 NRDDCLGQLITGEVDIAVIYDSTHGPPRPDSRAFEEVSIGTEPLVAVCAP-----ALAPL 179 Query: 191 AQPH-FPLLNYSRNSYMGRLINRT----LTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + P++ Y + ++GR++ R L +EL +++ Q ALDG GIA Sbjct: 180 SGTSPLPVITYPGDVFLGRVVERAVFSRLPPGTELDRKAETALTLAAC--QYALDGIGIA 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 WLP + + G+LV L +D L + R+ + P A W L Sbjct: 238 WLPLSVVHDPLSQGRLVRLPQDGLDHMLDLRMIRLAEPIRPAALECWEAL 287 >UniRef50_Q16BZ6 Transcriptional regulator, LysR family, putative n=5 Tax=Rhodobacteraceae RepID=Q16BZ6_ROSDO Length = 325 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 141/288 (48%), Gaps = 12/288 (4%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 +W+ D L + + ++AA R V+Q AF+RR+R +E++IG ELF+R+ P+ L + Sbjct: 4 EWIDDILAVLDTGSLARAAQKRLVTQSAFTRRVRLIEESIGAELFDRRRRPVMLLAGVEA 63 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA--I 131 ++R L +L +L + + A H+++ + P I+ + + Sbjct: 64 LAPELRDLSTRLRQVRQKLHAANSQTGSALSFACQHAITTTVSPYIVRALTARGDAPVRV 123 Query: 132 EAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + +E + L G+ D + ++ + LE F+ ++L + L PVCA Sbjct: 124 RSCNQEECLVLLLSGEVDFVLTYTVPETPTPFLEGAFESLKLGDDVLIPVCAPGLRD--- 180 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRH--SELSFSTFFVSSMSELLKQVALDGCGIA 245 +++ P+++Y + ++G++ +R + +E+ T ++++ + A+ G G+A Sbjct: 181 -DISSDRLPVISYPSDVFLGQVFDRHIVPRLDNEVQVVTKTETALTLAAYEFAVGGIGVA 239 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 WLP+ + + G L+ L+RD V P+ A+R+ ++ WR Sbjct: 240 WLPQSMVVTALAQGSLISLDRDLPVQPLHIKAFRLCDDGGLQSDSAWR 287 >UniRef50_B9R307 LysR substrate binding domain, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R307_9RHOB Length = 311 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 75/294 (25%), Positives = 129/294 (43%), Gaps = 19/294 (6%) Query: 18 DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQ 77 D L L + NFSQAA N+SQ AFSRRIR+LE +GV L +R P++L+ G Sbjct: 8 DLLRLSQTGNFSQAAQLCNLSQSAFSRRIRSLEAWVGVTLVDRSRQPVRLTPAGLQMLEA 67 Query: 78 IRHLLQQLESNLAELRGGSDYAQRKI-KIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDV 136 L ++E ++L + + A HS+ P+ + + + + Sbjct: 68 GTQALDRVEHERSQLLEAQSLPDKYVVTFGAQHSIGWRFYPTWLQSFEETYGPILSRLRA 127 Query: 137 DEAVDKLRE---GQSDCIFSFHDEDLLEA------------PFDHIRLFESQLFPVCASD 181 D+ + LR+ G D + ++ + P + +++ + L PV Sbjct: 128 DDLPNCLRDLQNGDVDFVIAYESAHVRYCDTGRRMARSNALPLETLKIGQDTLIPVSKPT 187 Query: 182 EHGEALFNLAQP--HFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMSELLKQVA 238 G LF+L P L + + +G+ + + + + ++M+ L+ A Sbjct: 188 PDGAPLFDLNSGLLELPFLRFGDEAPIGQHLGSLFEQEKIQERLRVVYENAMAGALRIRA 247 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 DG G+AWLPE + Q+IRSG LV R E +P++ +R + N + W Sbjct: 248 RDGMGVAWLPETLVAQDIRSGALVQTGRPEWSVPLEITLFRNDKHTNRLTRSIW 301 >UniRef50_A9I640 Transcriptional regulator, LysR-family n=4 Tax=Bordetella RepID=A9I640_BORPD Length = 304 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 15/295 (5%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + K L D + L + +F +AA R+V+ PAF RRIRALE G L RQ P+ L+ QG Sbjct: 3 DLKLLEDLIALAQTGSFVRAAELRHVTHPAFGRRIRALEAWAGTPLVQRQRAPVILTPQG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM----PPLF 127 + +++++E +RG + ++IA SL+ L+ I+++ P + Sbjct: 63 EALLKAATQVVERMEQVRHRIRGAGAAGEPVLRIATGRSLARTLVADWIARLRHRSPKVL 122 Query: 128 TWA----IEAIDVDEAVDKLREGQSD--CIFSFHDEDLLEAP--FDHIRLFESQLFPVCA 179 T + + E V ++ +G+ D C + + +P + ++ L +L PV Sbjct: 123 TDGAQVELSTGMMKELVARMEQGRIDLLCCYEHPALSVQLSPERYRYMTLGIDKLVPVSQ 182 Query: 180 SDEHGEALFNLAQ--PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQV 237 +D G + L + P PLL Y+ M R++ L + + F + + Sbjct: 183 ADTRGRPRYALRETGPGVPLLTYAGGLSMERILGDRLE-AMPYALAPFMRIDSLDAAHGL 241 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 L G G+AWLP + + R G L L I + YR R+ +AE W Sbjct: 242 VLKGLGVAWLPWSMVAGDCRRGVLAALGGRSEEISFEVRLYRSRARLADLAEAAW 296 >UniRef50_A1TXT6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1TXT6_MARAV Length = 301 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 131/305 (42%), Gaps = 26/305 (8%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +WL DFL L + R+FS+AA ++VSQP FSRRI+ LE+++G L NRQ PL L+ Sbjct: 1 MEIRWLEDFLALARTRHFSRAAEQQHVSQPTFSRRIKLLEESMGTTLINRQTLPLSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP------ 124 G++F + +++ + A +I + + L ++M Sbjct: 61 GEVFQELCERITREVRDTRDRIAALDAEASARISVGSTQGLFSHFYQGWATEMGIAERLQ 120 Query: 125 ---PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDED------LLEAPFDHIRLFESQLF 175 W E +D L G+ D + + D L F + L Sbjct: 121 LNLTATNWVGEQF-----LDALESGECDLVLCYWHPDLPWGDRLASDKFQWQTIGREALV 175 Query: 176 PVCASDEHGEALFNLA----QPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSM 230 PV ++E GE + L QP PL+ Y ++ I+ L R + ++ Sbjct: 176 PVSIANEQGEPRYRLPGTNEQP-VPLIAYHSRGFLQSAIDGHLQRGKLPANLLPLNENTQ 234 Query: 231 SELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAER 290 S +K + G G+ WLP+ ++ + G+LV + +P++ R++ + Sbjct: 235 SASIKALVKQGFGMGWLPKRMTEKSEQFGRLVRAGDERWDVPLEIRLIRLSDARSDDILN 294 Query: 291 FWREL 295 W++L Sbjct: 295 LWKQL 299 >UniRef50_A9BU84 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BU84_DELAS Length = 311 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/310 (25%), Positives = 127/310 (40%), Gaps = 25/310 (8%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 +H + K L D L + +AA R+++ PAF RRIRALE+ G L R L Sbjct: 1 MHELNLKLLQDLQALADTGSLYKAAERRHITHPAFGRRIRALEEWAGTPLVERGHQSTTL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMP 124 + GK + +L LE L+ I IAA +LS +LP II+ Q Sbjct: 61 TAAGKTLLASAHEVLGILEQTHGLLQRPHRTRDETITIAAGRTLSHTVLPGIITALNQAM 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIF---------SFHDEDLLEAPFDHIRLFESQL- 174 P W + +D V+ L +G+ D + S L P L + Sbjct: 121 PQLCWKVVTTSLDYGVEMLLQGKVDLLMCHAQPAIEGSLQGHHLAWLPVGQDTLIPVSIP 180 Query: 175 ----FPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSS 229 P A HG P P L+Y+++ +G+++ L + + T + + Sbjct: 181 LVPQLPKYALPAHG------GGPLVPYLDYAQSMSLGKILRSHLHELCDTTRLRTVYEAD 234 Query: 230 MSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVA 288 +++ L + G G+AWLP ++ ++ G+L + +PI YR + P+ Sbjct: 235 LADSLHAMVHQGLGLAWLPLTLVKADLTEGRLARAAGPDKDVPINVRLYRRPAAQSKPLT 294 Query: 289 ERFWRELREL 298 R W L L Sbjct: 295 RRVWAGLENL 304 >UniRef50_A1VSV5 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=A1VSV5_POLNA Length = 313 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 89/294 (30%), Positives = 138/294 (46%), Gaps = 11/294 (3%) Query: 5 GAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTP 64 G + ++ +WL DFL L + NFS+AA +R ++QPAFSR IRALE+ GVEL +R P Sbjct: 2 GPVNRPLDLEWLEDFLALAESGNFSRAAQARAIAQPAFSRHIRALEEWAGVELIDRARHP 61 Query: 65 LQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPS-IISQM 123 + G++F R ++ +L + A R ++ AA H LSL P + Sbjct: 62 AAPTPAGEVFVVTARDVVLRLLQARTRAHEAHEQASRSLQFAATHVLSLAFFPRWLQQVE 121 Query: 124 PPLFTWAIEAI-DVDEAVDKL---REGQSDCIF--SFHDEDLLEAPFDHIRLFESQLFPV 177 + AI + D +A ++L R Q + S LL F+ + E +L PV Sbjct: 122 QQVQLGAIHMVSDSYQACEELMLQRRVQFLLCYGHSAVKTRLLPPEFEFACVGEDRLVPV 181 Query: 178 CASDEHGEALFNL---AQPHFPLLNYSRNSYMGRLI-NRTLTRHSELSFSTFFVSSMSEL 233 A D G+ + A P+L YS S +G+++ +R F S + L Sbjct: 182 SAPDAGGQPQHQIDGDAHEPLPVLAYSEASGLGQIMRDRMPGAFDAQRFKPVMTSHHAVL 241 Query: 234 LKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV 287 LK +AL+G G+AWLP + E+ +L E IP++ +R + P Sbjct: 242 LKTMALEGRGVAWLPHSLVSAEMADKRLTSAAGPEWSIPLEVRLFRATDSLAPT 295 >UniRef50_C6BQ98 Transcriptional regulator, LysR family n=1 Tax=Ralstonia pickettii 12D RepID=C6BQ98_RALP1 Length = 303 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 76/299 (25%), Positives = 143/299 (47%), Gaps = 23/299 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL D + +E NFS+AA +RNVS + SRRI+ LE+ L +R P++L+ Sbjct: 1 MDVNWLKDLVEVESKGNFSRAAQARNVSVSSLSRRIQLLEEWANHPLVDRTSHPIRLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQR-KIKIAAAHSLSLGLLPSIISQMPPLFTW 129 G++ + +L +LE L + AQR ++ A ++S+ + P +++ + Sbjct: 61 GEVLLPVAQAVLSELERVRTRL---NPAAQRLPVRFLAPSAVSVAVFPRLLAAL----QG 113 Query: 130 AIEAIDVDEAVDKLRE-----GQSDCIFSFH---DEDLLEAPF---DHIRLFESQLFPVC 178 A+ A+ ++ D RE G + F+ + DE + P + + + L PV Sbjct: 114 ALGALLINLIPDNFREVIRRFGAGEAEFALYYVCDEFVPRLPMGRGESVMIARDVLIPVA 173 Query: 179 ASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 S+ AL ++ SY+GR+ + RH + + + ++Q+ Sbjct: 174 RSN---SALKGSQAKSVRVVVLDDASYLGRITKAAMLRH-RIEYEVALSGTQILAIRQIV 229 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 ++G G+AWLP + +++ + +LV + RD IP +A R ++P E W +L+E Sbjct: 230 IEGGGMAWLPASLVAEDLEAHRLVRVRRDFPSIPFTIHAARQPFPLSPDHEAVWEKLKE 288 >UniRef50_A1TW95 Transcriptional regulator, LysR family n=8 Tax=Comamonadaceae RepID=A1TW95_ACIAC Length = 314 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 79/309 (25%), Positives = 128/309 (41%), Gaps = 28/309 (9%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR---------- 60 ++ KW+ DF+ L + R+F++AA R+V+ PAF RRIRALE G L R Sbjct: 1 MQLKWMEDFIALAQERSFTRAAELRHVTHPAFGRRIRALEAWAGTALVERGGAQEQDAGH 60 Query: 61 ------QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLG 114 P++L+ G F + L ++L + ELR + R + IA +L+ Sbjct: 61 PRGRGGAGGPVRLTAAGTAFLATAEQLARELSQSQGELRAIAGRQARSVTIATGRTLART 120 Query: 115 LLPSIISQMPPLFTWA---IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFD-----H 166 L + ++ + A + + + V+ L G++D +H LE D H Sbjct: 121 ALADALPRLRAVLQSAELRVVTNGLAQTVEMLERGEADFWLGYH-HAALEVRLDGRSYAH 179 Query: 167 IRLFESQLFPVCASDEHGEALFNLAQPH--FPLLNYSRNSYMGRLINRTLTRHS-ELSFS 223 L +L PV +D G LA P L Y+ +GRL+ L RH Sbjct: 180 ATLASDRLVPVSRADSQGLPRHALASSGSAVPYLAYADTLALGRLVEDLLARHPLAPRLR 239 Query: 224 TFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR 283 ++ + G G+AWLP ++ + ++G+L L + R R Sbjct: 240 RIIECDSADAQYEYVHRGLGVAWLPWSMVRADCQAGRLAAAGERRLELRFDVRLVRPKRR 299 Query: 284 MNPVAERFW 292 + AE W Sbjct: 300 LTDAAEAAW 308 >UniRef50_A6E4T8 Transcriptional regulator, LysR family protein n=2 Tax=Roseovarius RepID=A6E4T8_9RHOB Length = 299 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/291 (28%), Positives = 138/291 (47%), Gaps = 29/291 (9%) Query: 18 DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ----LSEQGKI 73 D L L + N S+AA RNV+QPAFSRRI++ E +G + R ++ LSE Sbjct: 8 DVLVLLEEGNMSRAARRRNVTQPAFSRRIQSFENWLGRPIVKRAANRVEIEPALSENIVE 67 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLFTWA 130 + IRH+ + L +A+ + A+ + +AA HSL + + P + P + Sbjct: 68 LQALIRHV-EALRQRIAKY----NAARSTVTVAAQHSLIVSIFPDFAAGARDAQPEVDFR 122 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFES-----QLFPVCASDEHGE 185 + A + ++ + G++ + + + PFD R+ + +L PV G Sbjct: 123 LRAANHNDCISLFLSGEASLLMCYERDGGEPMPFDD-RIVRATWGRDRLVPVIG----GA 177 Query: 186 ALFNL----AQPH-FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 F L A P P++ Y S+ ++ T +S S STF S+ + +K++AL Sbjct: 178 LRFTLDRKGAPPEDTPMIRYPPGSFFADMLAGASTSYSNHSGSTFAESAFTVGVKEMALM 237 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERF 291 G +AWLP + E++SG L+V N D +P++ + T +PVA R Sbjct: 238 GFALAWLPMSLVYSEVQSGALIVCNGDTETLPLRISLFARPT--DPVAMRL 286 >UniRef50_Q168Z1 Transcriptional regulator, LysR family, putative n=6 Tax=Alphaproteobacteria RepID=Q168Z1_ROSDO Length = 296 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 79/273 (28%), Positives = 129/273 (47%), Gaps = 29/273 (10%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ +WL D L L + N S+AA RN++QPAFSRRIR E +G ++ R++ +++SE Sbjct: 1 MQFQWLDDVLVLLEEGNMSRAAARRNITQPAFSRRIRGFEDWLGTDIIERKMNRVEISEA 60 Query: 71 GKIFHSQIRHL---LQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI---ISQMP 124 +IR L L++L + +A + ++ +++AA H+ P + Q Sbjct: 61 LISNEDEIRALMTRLRELRTKIAHY----EKSRMTVELAAQHAPICAAFPDMALRARQEL 116 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPF--DHIRLF--ESQLFPVCAS 180 + + A ++++ V G + + + E + F D IR L PV Sbjct: 117 HGLQFRLRAGNLNDCVSMFLRGDTSMLLCYQAESVRRLQFGPDIIRGVWGNDYLVPVV-- 174 Query: 181 DEHGEAL------FNLAQPHFPLLNYSRNSYMGRLI---NRTLTRHSELSFSTFFVSSMS 231 G AL F H P + Y +SY G ++ NR S S +TF VS+ S Sbjct: 175 ---GGALRSVVTDFGTVPAHTPAIVYPEHSYFGEVLRRNNRPFGIPSS-SANTFSVSAFS 230 Query: 232 ELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVL 264 +++ L G GI WLP +EI SG+L+ L Sbjct: 231 SGTRELVLKGLGIGWLPFSMAHREIESGELISL 263 >UniRef50_UPI0001903475 LysR family transcriptional regulator n=1 Tax=Rhizobium etli GR56 RepID=UPI0001903475 Length = 239 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 5/140 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL DF+ L RNFS AA +R+V+QPAFSRRIRALE IG EL +R P++L+ Sbjct: 1 MELNWLEDFMELAAVRNFSTAAAARHVTQPAFSRRIRALENWIGTELIDRSSYPVRLTGA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS----QMPPL 126 G+ F R L++++ E R + + +A H+++L + P +++ + P Sbjct: 61 GETFLESSRELMREIYRVRDECRQQARAGIEAVTFSALHTIALSIFPDLLTAIEERTGPF 120 Query: 127 FTWAIEAIDVDEAVDKLREG 146 T + A D A +LR Sbjct: 121 IT-RMHATDSTTAWSRLRSA 139 >UniRef50_B6B926 Transcriptional regulator, LysR family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B926_9RHOB Length = 298 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 31/302 (10%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ W+ D L + + ++AA R ++QPAF+RR+R +E +GV LF+R P+ + Sbjct: 1 MQLDWIDDILAVIDTGSLARAADQRLLTQPAFTRRVRGIETRLGVNLFDRSRKPVTILPG 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 ++R L +L +L+ + R + A H+++ + P I+ L T A Sbjct: 61 VMAMEPELRELSARLRRLEHDLKISVESGGRGVAFACQHAITATISPWIVK----LLTSA 116 Query: 131 ------IEAIDVDEAVDKLREGQSD--CIFSFHDEDLLEAP--FDHIRLFESQLFPVCAS 180 + + + D + +L G +D + + L P F L QL PV A Sbjct: 117 QDQPVRVRSGNRDACLMQLLSGDADFAVAYDWTGGGNLALPDAFGTRALGTDQLVPVAAP 176 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLK----Q 236 + L Q P + Y + ++GR+ + + H L T + L + Sbjct: 177 ----SLMAALEQTEIPAITYPSDVFLGRVASHAI--HPRLPDGTVLLPKAETALTLAACE 230 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLV---VLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 ALDG G+AWLP ++ + + +L+ L +EL + R+ R + E WR Sbjct: 231 YALDGIGVAWLPLSLVRPHLEAARLLRVPGLPAEELSV----VMIRLAGRSSRQEETVWR 286 Query: 294 EL 295 L Sbjct: 287 LL 288 >UniRef50_A5N491 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N491_CLOK5 Length = 301 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 33/283 (11%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L F+T+ K NF +A N SQ + S IR+LE+ +G +LF R + L+E Sbjct: 1 MDIKQLQTFITVAKLLNFREAGEELNYSQSSVSDHIRSLEKELGTKLFERLGRKVFLNEN 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 GK S ++Q E + L ++ ++I AA +LS+ LP I+ + ++ Sbjct: 61 GKKLISLAEKIIQD-EKEIQGLFNKNEKISGLLRIGAAETLSVFWLPPILKEYRIIYPDV 119 Query: 131 IEAIDVDEAVD---KLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + +D+ V+ L D FS HD+ E L +S +F Sbjct: 120 KVTLRMDDCVEFPKMLSHNMIDVAFSLHDQSQHEYISQINILKDSTVF------------ 167 Query: 188 FNLAQPHFPLLNYSR--------NSYM-------GRLINRTLTRHSELSFSTFFVSSMSE 232 +A P PL+N +R S++ R+ L + + + T S E Sbjct: 168 --VAAPDHPLVNLNRIKIHELENQSFILPEAECCYRVELEELLKENGIKIDTIMELSSLE 225 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA 275 +KQ G GI+ LP+ A+Q+EI G+L +L + I I A Sbjct: 226 AIKQCVKIGLGISLLPKIAVQREINKGELAILTIENCDISICA 268 >UniRef50_A0Q7E8 Transcriptional regulator, LysR family n=14 Tax=Francisella RepID=A0Q7E8_FRATN Length = 298 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 30/280 (10%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+ ++FS+AA + +S P S++I+ LE LFNR + L+E GK+ + + Sbjct: 10 FIKAAHLKSFSKAAKAIGISPPVISKQIQILETKYRKSLFNRNTRTVHLTEYGKLLYEKA 69 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDE 138 +L +LE+ ++ ++KI+A +S + L +I S+ AID + Sbjct: 70 SLILNELEATEEKIFAEDILIDSELKISAPNSFGIKYLCNIFSKF---------AIDYPK 120 Query: 139 AVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPV----CASDEHGEALFNL 190 KL SD + DED + D L +L P+ CAS+++ L N Sbjct: 121 Y--KLNINLSDSYINIIDEDFDLVIRIGALDDSNLITKKLMPMPSLLCASEQY---LKNY 175 Query: 191 AQP-------HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 P + + Y+ +S R+I ++ + ++ V++ +E++ Q LDG G Sbjct: 176 GIPKTIKDLENHLFIQYNNHSSSNRIILESVNKTEIINVRQRIVTNSAEMMLQGCLDGLG 235 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR 283 IA LP + I +I KLV L D PI+ Y +++R Sbjct: 236 IAKLPLFEIIDKIHDKKLVHLLPDARN-PIEKNLYLISSR 274 >UniRef50_A3JF22 Putative LysR-family transcriptional regulator n=1 Tax=Marinobacter sp. ELB17 RepID=A3JF22_9ALTE Length = 294 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 16/256 (6%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK- 72 K L F + K +F AA SQPA S RI LE +G+ELF+R + L+ +G+ Sbjct: 4 KALETFFWISKLGSFRAAAKKLYASQPAISARISGLEDELGIELFDRSGRNVVLTSKGRQ 63 Query: 73 -IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAI 131 +F+++ + QL + L E SD + I++ AA +++ LP +I ++ + Sbjct: 64 ALFYTE---KILQLHAELLEAVASSDTIKGSIRLGAAETIAYTWLPELIERINETYPAIN 120 Query: 132 EAIDVDEAVD---KLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 +D+D +V+ KL + + D F E PF + L + P Sbjct: 121 LELDIDISVNLAEKLIKREIDIAFLIGEVKQEGFFCTPFYNYPLIWV-VSPKLTLPPEPV 179 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 +LF+LA+ P++ Y R S I R L S SS+S +++ +ALDG G++ Sbjct: 180 SLFDLAK--LPIITYPRMSEPHVNI-RALVNEMSNSAQIHSSSSLSTIIR-MALDGIGVS 235 Query: 246 WLPEYAIQQEIRSGKL 261 LP+ I++E+ SG+L Sbjct: 236 ALPKEIIKRELASGQL 251 >UniRef50_Q5ZZF5 Transcriptional regulator, LysR family n=5 Tax=Legionella pneumophila RepID=Q5ZZF5_LEGPH Length = 302 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 77/294 (26%), Positives = 140/294 (47%), Gaps = 29/294 (9%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+T+ + F A + SQPA + I+ LE ++G ELF+R+V QL+ +GK F+ + Sbjct: 10 FITIVESGGFIAAGEKMHRSQPAITNAIKKLESSLGFELFDRKVYRPQLTAKGKAFYQKA 69 Query: 79 RHLL---QQLESNLAELRGGSDYAQRKIKIAAAHSLS--LGLLPSIISQMPPLFTWAIEA 133 R ++ QLE++ LR G + Q I + A L L+ S I Q P +++ Sbjct: 70 REVVAQFMQLENSAETLRSGVE-TQFSIDLDIALPLPGYAPLIQSFIRQYPET-CFSLSN 127 Query: 134 IDVDEAVDKLREGQSD-CIFSFHDEDLLEAP-FDHIRLFESQLFPVCASDEHGEALFNLA 191 +++L + CI + H + +P +++R+ ++ PV + D + + + Sbjct: 128 NTFVRCLERLERRECHLCIAASH----IRSPQIEYLRMPSIRMIPVASRDYYDQHKERIN 183 Query: 192 QPHFPLLNYSRNSYMGRLINRTLTRHSEL-------SFSTFFVSSMSELLKQVALDGCGI 244 P + M +I T +L S + V M + KQ+ L G GI Sbjct: 184 NPKLGIYC------MQIMIAGTQQELYQLKIEPLSHSMPKWLVGDMY-IRKQLILSGMGI 236 Query: 245 AWLPEYAIQQEIRSGKLVVLN-RDELVIPIQAYAYRMNTRMNPVAERF-WRELR 296 LP++ +++E+ G LV LN RD + + + YA R+N + + + + W+ L+ Sbjct: 237 GRLPDHLVEKELAEGSLVQLNTRDYVAVTMDIYAMRLNNQEHGMVSNYAWQSLK 290 >UniRef50_Q3IDC2 Putative transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IDC2_PSEHT Length = 280 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 10/243 (4%) Query: 28 FSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLES 87 S AA ++ A S++I+ LEQ +G+ LFNR L L+E G I++ + LLQ E Sbjct: 1 MSLAAKQLGMTTSAVSQQIKTLEQEVGLNLFNRSPRSLSLTEAGDIYYQSCKKLLQTAEQ 60 Query: 88 NLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF-TWAIEAIDVDEAVDKLREG 146 +L+ + K+K+ A GLL + ++ L IE I DE VD L+EG Sbjct: 61 TKQKLQYLTGIPSGKLKLVAPVGFGAGLLSEPLKRLIELHPKLNIELILTDEPVDMLKEG 120 Query: 147 Q--SDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLNYSRNS 204 + CI +D +L+ R + +C + H A+ + + +S Sbjct: 121 ADLALCIGPLNDSNLIA------RKLAQWPYALCVNATHPLAINDQCIEQLNQHAHIAHS 174 Query: 205 YMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVL 264 ++ + + + L+ V++M ++ Q+ DG G A LPE +++ I++ +L L Sbjct: 175 HLNYQLFKPNSAPYTLNAPRIKVNNMQSVI-QLVCDGLGYAMLPEPEVRERIKNKELKQL 233 Query: 265 NRD 267 ++D Sbjct: 234 HKD 236 >UniRef50_C6Q178 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q178_9CLOT Length = 303 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 14/282 (4%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 + L FL + + NF AA N SQ S IR LEQ + V+LF R + L+EQG+ Sbjct: 4 RQLQTFLVVARLLNFRAAAEELNYSQSTVSDHIRNLEQELDVKLFERFGRKVFLNEQGEK 63 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLFTWA 130 S + +++ E + +L + + +KI +A +L + LP ++ S++ P Sbjct: 64 LISPAKKMIKDAEE-IHKLFDNDEKIKGTLKIGSAETLCVFWLPPLLKEYSKIYPDVQII 122 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL--- 187 ++ D E + L + D FS HDE + I LF+ V A + ++ Sbjct: 123 LKMADCLELPEMLEKNIIDAAFSLHDES-AQQQLSQIDLFQDSTIFVAAPNHPLTSVKKI 181 Query: 188 --FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + L F +L S+ Y L + L + + +T S E +KQ +G GI Sbjct: 182 TAYELENQAF-ILTESKRGYSFEL--KKLLENLNIKTNTIMELSSLEAIKQCVKNGLGIT 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNP 286 LP + +E+++G+LV+L + I IQA Y M+P Sbjct: 239 LLPRIVVDKELQNGELVILPVEINQILIQAKMIYHREKWMSP 280 >UniRef50_A6X6J5 Transcriptional regulator, LysR family n=2 Tax=Ochrobactrum RepID=A6X6J5_OCHA4 Length = 307 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/274 (25%), Positives = 130/274 (47%), Gaps = 18/274 (6%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 ++L + L + RNF A N++ A S RI A+EQ +G LF+R + L+ +G+ Sbjct: 4 RFLETVIWLSELRNFRATAARLNMTPAAISNRIGAMEQELGFRLFDRDARDVNLTAEGEA 63 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPS---IISQMPPLFTWA 130 F R ++++ +L E + + +KI SL++ +LP I+ Q P + Sbjct: 64 FVEGARDVVRRYH-DLVESLSPQNGLEGTLKIGIVPSLAMTILPGILDIVRQRYPQIRIS 122 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFES---QLFPVCASDEH-GEA 186 I V KL + + D +F+ E P ++R+ + +F + S++ G A Sbjct: 123 ITTSSSKGIVQKLEQRELDIVFAIKPE-----PTPNLRIVDICTFGMFWISRSNQFPGGA 177 Query: 187 LFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 L++ L++Y SY + I T + + +S++ + ++ G G Sbjct: 178 EDMLSRDDLLGCNLISYESGSYNYQQIINYFTEERLKDATVHYSNSLTTTINMISA-GVG 236 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA 277 I+ +P IQ+E+R+G+L VLN + V P +Y+ Sbjct: 237 ISVIPPVVIQKELRTGELQVLNTNA-VFPATSYS 269 >UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Q42_RALEJ Length = 297 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 29/268 (10%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+ K L F+ L RNF++AA + ++SQ AFS ++ LE+ G LF R ++LS Sbjct: 2 NLSVKHLRAFVALATHRNFTRAARACHLSQSAFSALVQTLEEQAGSRLFERTTRHVELSA 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTW 129 G F R LL E+ +LR ++ + ++ IAA S++ G LP +++ + Sbjct: 62 DGMRFEETARRLLGDFEAAFEDLRAHAERRKGRVSIAALPSIAGGDLPPLLAAFRQRYPG 121 Query: 130 -AIEAID--VDEAVDKLREGQSDCIFS---FHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 A+E D D +D +R G++D + D+DL P H F + H Sbjct: 122 IALELFDQLADGCIDLVRRGRADFALAPAPVQDDDLRVEPLVH------DTFHLVCPTTH 175 Query: 184 GEALFNLAQPHF----PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSEL--LKQV 237 A P P ++ SR S ++ +H + + +SS+ E+ L V Sbjct: 176 VLARKRRITPQMLAGQPFIHLSRTS--------SVRQHLDAALHPLKLSSVMEVEHLATV 227 Query: 238 AL---DGCGIAWLPEYAIQQEIRSGKLV 262 A G G++ +P A+ Q R G V Sbjct: 228 AALVQAGLGVSVVPSLALFQFQRDGLAV 255 >UniRef50_B0MA97 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MA97_9FIRM Length = 298 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 132/259 (50%), Gaps = 22/259 (8%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 ++ FL + K NF++AA N++QPA S+ IR LE+ G++LF + L L+E+G +F Sbjct: 6 IFTFLEVCKQMNFTKAAKKLNITQPAVSQHIRWLEKEYGIKLFEMEGKKLSLTEEGDLFR 65 Query: 76 S---QIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ---MPPLFTW 129 + +H L+ + E++ G +R+I A ++ +LP ++ M P Sbjct: 66 NAAMTFQHDEMYLKHKIQEIKKG----KRRIYFGATLTIGDFILPRAAAEFIKMHPDTEV 121 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLF-PVCASD----EHG 184 +I + ++ +++L +G+ D F+ + + +D+ R++ + + VC D + Sbjct: 122 SIRIANTEDLLNQLDQGEID--FAMVEGYFEKKEYDY-RIYSRESYIAVCGRDYCFQKEP 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTL-TRHSELS-FSTFFVSSMSELLKQVALDGC 242 E L +L PL+ S ++ ++L R+ ++ F +S ++K++ +GC Sbjct: 179 EVLEDLLSE--PLITREAGSGTREIMEKSLEGRNLKIGDFKKNHEASSLHMIKKLVAEGC 236 Query: 243 GIAWLPEYAIQQEIRSGKL 261 GI +L E A +E+R G L Sbjct: 237 GITFLYEAAAGEELRDGIL 255 >UniRef50_Q0I520 Transcription regulator, LysR family n=3 Tax=Pasteurellaceae RepID=Q0I520_HAES1 Length = 309 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 72/297 (24%), Positives = 134/297 (45%), Gaps = 32/297 (10%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+ L +C N ++ A +QP+ S +I+ LE+++ LF R L L+EQGKIF + Sbjct: 24 FIVLSECLNVTETANKLFCTQPSVSIKIKKLEESLNTVLFERINNRLYLTEQGKIFQNYA 83 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ---MPPLFTWAIEAID 135 + +L LE+++ L D KI I A+H + + LLP II++ + P +I+ + Sbjct: 84 KQILSTLETSIEHLHQYDDPNYGKITIGASHFVGVYLLPKIIAEYKKISPNVKLSIDILP 143 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHF 195 + + KL Q D F + + P + +++ F SDE L +A P Sbjct: 144 SPQLIHKLENHQID--FLIMSDQIYFDP----QTYQTHRF---LSDE----LILIASPKN 190 Query: 196 PL-----LNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSEL----------LKQVALD 240 PL +++ S ++ L+ + F F +++L +K ++ Sbjct: 191 PLAKKTACDFTALSQQQLIMKPNLSETRKFIFQHFNHEQITQLKIMEFNSLEGIKHCVIN 250 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 G++++ A+ E+ S LV + L Y + + ++P +RF+ L Sbjct: 251 NLGVSFISRLAVTHELNSQLLVEIPLKNLTFERGINYIFYKDKFISPAIQRFFSLLH 307 >UniRef50_B7K2F2 Transcriptional regulator, LysR family n=8 Tax=Cyanobacteria RepID=B7K2F2_CYAP8 Length = 324 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 19/249 (7%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L FLT+ + NF QAA V+Q SR+I+ALE +G LF+R +L+ G+ Sbjct: 6 LQAFLTIAETGNFGQAARQCGVTQSTISRQIQALEGTLGALLFHRTAQA-KLTIAGEKML 64 Query: 76 SQIRHLLQQLES---NLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTW 129 + + + Q+ E+ +A+L+GG Q ++ +AA HS+ LP I+ Q P Sbjct: 65 PRAKKICQEWETINQEIADLQGGK---QPELCVAAIHSVCSHYLPPILQQFCHDYPHVQL 121 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFN 189 + A+ D A+ LR+G D ++ L +P + + S+ V + +H FN Sbjct: 122 RVTALGSDRALKVLRDGLVDVAIVMNNRFLTTSPEMVVEILYSENIEVLMAADHPLTQFN 181 Query: 190 ------LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 LA H+P + + M RL+ LT + +S + + + + G Sbjct: 182 EIPWSELA--HYPQVVFKEGYGMQRLVQEWLTTQN-ISLKIVMELNTLDAFRGIVRQGEI 238 Query: 244 IAWLPEYAI 252 IA LPE A+ Sbjct: 239 IALLPETAL 247 >UniRef50_UPI0000E0F9F3 Transcriptional Regulator, LysR family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F9F3 Length = 294 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 16/267 (5%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 K L FL + + NF++AA+ +V+QPA S I+ E +G ELF R + L+++G+ Sbjct: 6 KQLQAFLMMAQSHNFAEAAIKMHVTQPALSSAIKKCEDILGGELFTRTTRTVALTKEGEA 65 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ---MPPLFTWA 130 F + L + + +A+++ + +AA S + LP + Q + P + Sbjct: 66 FLPIAQRLHTEYQDAMAQIQAVFAKQTGTLSVAAMPSFAERYLPEYLYQFHILYPNISIK 125 Query: 131 IEAIDVDEAVDKLREGQSDCIFSF---HDEDLLEAPF--DHIRLFESQLFPVCASDEHGE 185 IE + V++ +D ++EG+ +C F+F H+ D+ P D + P+ Sbjct: 126 IEDVVVEKVIDLVQEGKVECGFTFEPKHNLDITFTPLFTDQFVVVMHASHPLNQPKHRTL 185 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSEL--LKQVALDGCG 243 L ++A F ++ +RNS + I+ + E + ++ S++ L Q+ G Sbjct: 186 TLHDIAT--FDMVVMNRNSNLRVFIDSV---YEEQEITQHIIAEASQIGTLGQLVKRQIG 240 Query: 244 IAWLPEYAIQQEIRSGKL-VVLNRDEL 269 IA +P+ + Q+ G + + LN +L Sbjct: 241 IAIVPQLSSQRMEELGLVCIALNESKL 267 >UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax=Proteobacteria RepID=A0AYH9_BURCH Length = 326 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 4/147 (2%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+E + L F+ + + RNF++AA +++QP SR+I+ LE+A+GV LF R PL+L++ Sbjct: 21 NMELRHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEEALGVPLFERTARPLKLTD 80 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PL 126 G+ F+S LL Q + L + +R + + S G+LP II + P Sbjct: 81 AGRFFYSHAVQLLAQ-TTELESMTKRVGKIERSMSVGFVGSTLYGMLPKIIRRFRSEYPA 139 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFS 153 ++ + + + L+EG+ D F Sbjct: 140 VELSLHEMSTMDQIKALKEGRIDVGFG 166 >UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPG0_PSEMY Length = 294 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 19/285 (6%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 FL + + + S A ++SQPA +R IR LE + + LF+R +QL+E G+ Sbjct: 9 FLAVAEAGSISAGAERLHISQPAVTREIRELEANLDLRLFDRLPRGVQLTEGGQRLLDYA 68 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM----PPLFTWAIEAI 134 R + ++ +LR + Q ++ + A+ +L LLP +IS+ P +F ++E Sbjct: 69 RRIFALEQAAERDLRDFAQLEQGELHLGASATLGAYLLPPLISRFRALHPQIFV-SLEVS 127 Query: 135 DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQP- 193 + + +L +G+ F + +A +DH L L PV A L A P Sbjct: 128 NTEAVTRQLDDGR--ISLGFVEGPFAQADYDHRLLARDALLPVVAPR---HPLARTAAPL 182 Query: 194 ------HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 +PL S + H + + S +E LK++ DG GIAWL Sbjct: 183 QASELQAYPLYMREPGSGARASVEHAYRVHGLEPRAGMAIGS-TEALKRLLADGQGIAWL 241 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERF 291 + +++E+ SG+L L +L I + + +R ++P F Sbjct: 242 SQRVVERELASGELQRLTVQDLQIERELHVLWRPGASLSPAPAAF 286 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 16/296 (5%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N + + L F+ + + +F AA N+S PA SRRI LE +G LFNR ++L+ Sbjct: 5 NFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVELTP 64 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTW 129 G++F + R L LES + + + + ++ +A S +L LP+++S + Sbjct: 65 LGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQHYP- 123 Query: 130 AIEAIDVDEAVDKLRE----GQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 I VDE ++++ + G+SD F + + E F+ I + F + EH Sbjct: 124 GIRVRVVDETMNQVLQSVLSGESDFGIGFMNTLVPEIAFESI---HNDPFVLAMRREHPL 180 Query: 186 ALFNLAQ----PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 A L+ +R+S +L++ +LT+ F VS ++ LL V G Sbjct: 181 ARHKSVNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVATLLGMVE-AG 239 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLN-RDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 G+A +P A+ LV L R + R ++ P AE F + LR Sbjct: 240 LGLAAVPRMALAST--HATLVGLPLRQPQTVRRVGLLTRHGVKLRPAAEMFHQHLR 293 >UniRef50_A1W6X9 Transcriptional regulator, LysR family n=19 Tax=Burkholderiales RepID=A1W6X9_ACISJ Length = 310 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 68/112 (60%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+ T+ + FL L RNF++AA ++SQPAFS IRALE +G+ LF+R + L+ Sbjct: 2 NVSTRQIDAFLALAAQRNFTRAAAQCHLSQPAFSALIRALEDDLGLRLFDRSTRHVSLTA 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS 121 +G+ FH+ + ++++ LA LR + + ++ +A SL+ G LP +++ Sbjct: 62 EGENFHASALRIRAEVDAALATLRDAALLRRGRVSVALLPSLAAGWLPGVLA 113 >UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2B6_DESAS Length = 291 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 131/265 (49%), Gaps = 15/265 (5%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + +I +L F ++ + ++S+A N+SQPA SR+I +LE+ +G++LF ++ + L Sbjct: 1 MTDIIFNYLRVFHSVARHLSYSKAGEELNLSQPAVSRQISSLEKGLGLDLFTQRGRKVVL 60 Query: 68 SEQGKIFH---SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP 124 ++ G+ + +I L QQ LA+ D + ++++ + L LLPSI+ + Sbjct: 61 TDAGRSLYDYADRIMGLAQQAGRTLAQYH---DLERGEVRLGVSPVLGCYLLPSILKEFY 117 Query: 125 PLFTWAIEAIDVDEA---VDKLREGQSDCIFSFHDEDLLEAPFDHI-RLFESQLFPVCAS 180 F ++ +D + ++ +G+ D LE+ H+ R + L VC Sbjct: 118 TRFPNIKVSLQLDSGQKLIKRIEDGKLDLALVVGP---LESDRIHLERYTQDALVLVCPP 174 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 E +FN ++PL+ + S I L ++ ++ +E++K++ + Sbjct: 175 GED-SPMFNEIFINYPLITREKPSSTRITIEDHLAKY-DIRPKLIMEIPDNEVIKRLVIT 232 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLN 265 G G+A+LP+ A++ E+ SG L V+ Sbjct: 233 GIGVAFLPKRAVETELVSGALQVVK 257 >UniRef50_B5FDE5 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=B5FDE5_VIBFM Length = 300 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 136/289 (47%), Gaps = 31/289 (10%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+T+ + + ++AA N+++ A S+R+ LEQ +GV+L NR L+E G+++ ++ Sbjct: 10 FITVVETGSITRAAERLNLAKSAISKRLSELEQQLGVKLLNRTTRTSSLTEAGQVYLNKC 69 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLG-LLPSI--ISQMPPLFTWAIEAID 135 + +L +++ + S +K+A + L L+P++ +++ P I+ Sbjct: 70 KLILDEVDDLHCHISSTSSKLNGVLKLAVPLTFGLKHLVPALDNFAKLHPELKLDIDF-- 127 Query: 136 VDEAVDKLREGQSDC--IFSFHDEDLLE---APFDHIRLFESQLFPVCAS----DEHGEA 186 D+ +D + +G I S ++ L AP H+ +C S EHG Sbjct: 128 SDKKIDLVEDGVDLAIRIGSLNNSTLRAKPLAPIHHV---------LCVSPDYLTEHGHI 178 Query: 187 LFNLAQPHFPLLNYSRNSYMG-RLI---NRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 LL YS+ G LI N+T+T + +F +++ + LK +A+ G Sbjct: 179 TTPNDLKSHKLLRYSQQPLSGVELIDNNNKTMT----VPMESFCIANNGDFLKTMAVSGH 234 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERF 291 G+ + P++ + +E+ +G L+ + D I+AYA TR P R Sbjct: 235 GVLFTPKFIVWEELANGSLIPIMTDYRFNSIKAYAVYPETRYLPRKVRM 283 >UniRef50_C9NYW9 Transcriptional regulator LysR family n=2 Tax=Vibrionaceae RepID=C9NYW9_9VIBR Length = 315 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 22/258 (8%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F L +NF+QAA S VS S+++ LE+++GV+L R +E G+ F Sbjct: 12 FAALLTHKNFTQAAKSLGVSVSHVSKQLALLEESLGVKLVQRTTRTFTPTEAGEQFFYHC 71 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSL-SLGLLPSIIS---QMPPLFTWAIEAI 134 + +++ +E E+ D I+I + S +L +LP+I Q P L +E Sbjct: 72 QKVVRSVEEAHLEVESQKDEVAGLIRIGLSQSFGTLHILPAIDELRLQHPNL---QVEMH 128 Query: 135 DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPH 194 D VD L+EG I + ++L + RL +SQ F V AS E+ L N PH Sbjct: 129 LFDYKVDMLQEGLDLWIT---NNEMLPEGYVAQRLADSQ-FVVAASPEY---LMNYDTPH 181 Query: 195 FPLLNYSRNSYMGRLINRTLTRHS--------ELSFSTFFVSSMSELLKQVALDGCGIAW 246 P N + R R T + + S + ++E ++ A+ G G+A+ Sbjct: 182 HPNDLVDHNCLIYRSWERDYTSWAFSNRDDQINVKVSGNYSVDLAEAVRDAAVAGWGVAY 241 Query: 247 LPEYAIQQEIRSGKLVVL 264 L Y I+ E + G+L+ L Sbjct: 242 LATYLIRDEFKQGQLIQL 259 >UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=Clostridia RepID=B8D275_HALOH Length = 296 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 27/259 (10%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+ + K +N S+AA +SQPA S+ I LE+ + ++LF+R L+L+ GKI Sbjct: 9 FVMVCKTKNMSKAAKKLYMSQPAISQTISELEEDLNIKLFDRIKKRLKLTYAGKILLRNS 68 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF----------- 127 + +L ++ ++ + Q K++I A+ ++ LLP II + Sbjct: 69 KRILNLVDETENIIKDIVNMNQGKLRIGASMTIGTYLLPQIIEGFLNKYNKIHLPFTIDN 128 Query: 128 TWAIEAIDVDEAVD-KLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE---H 183 T IE + +D +D L EG C +D+L F F+ QL+ +C+S H Sbjct: 129 TKVIEDMILDNKLDLALVEGPIYC------KDILVEHF-----FDDQLYLMCSSKHSWSH 177 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + + + + S I + +HS + + V + E +K+ + G Sbjct: 178 KRKINSEELKGEDFIIREKGSGTRETIENIMRKHS-IKYHVTHVFNNIEAIKRAIISNLG 236 Query: 244 IAWLPEYAIQQEIRSGKLV 262 ++ LPE +++E++ G LV Sbjct: 237 VSILPEICVKEELKKGLLV 255 >UniRef50_B3DV00 RuBisCO operon transcriptional regulator CbbR n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV00_METI4 Length = 303 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 138/293 (47%), Gaps = 15/293 (5%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 + ++++ LY F+T + +FS+AA S ++SQPA SR I++LE+ +G LF+R+ L+ Sbjct: 3 YPLDSRALYIFVTAAQSESFSKAAKSLHMSQPAISRTIQSLEEELGCRLFDREGKNPLLT 62 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT 128 G+ F + + +L +E ++ +KI A + +P + + F Sbjct: 63 PIGREFLADAKEILAGMEKARIDIENLKREGPKKIVFATSSLSCQYFIPQLYREFQESFP 122 Query: 129 ---WAIEAIDVDEAVDKLREGQSDCIFSF----HDEDLLEAPF--DHIRLFESQLFPVCA 179 +AIE D A++ + E + D + + E L+ D + S L P Sbjct: 123 DCLFAIEPADSPLALELVEEKKVDFAITLKPLSYKEGLVMVELFQDDLLFLVSSLHPWTR 182 Query: 180 SDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 E + + Q H+ S+N+ ++ ++L + S L +F + + +K+++ Sbjct: 183 KKEIPKK--EIEQAHY--FIKSKNNTTFHILQKSLAQAS-LYPKSFIELAETAAIKEMSK 237 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLN-RDELVIPIQAYAYRMNTRMNPVAERF 291 G GI L + ++ E++ GKLV L E + +AY+M +++ + F Sbjct: 238 MGLGIGVLASWVVKDELKKGKLVSLPLVPERITRKWVFAYKMGRKLSLLESTF 290 >UniRef50_A0Q2F6 Transcriptional regulators, LysR family n=16 Tax=Clostridiaceae RepID=A0Q2F6_CLONN Length = 297 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 14/277 (5%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 ++L F KC + S+AA + +V+QP S +++ LE+ +GV L NR ++L+E+GK+ Sbjct: 4 EYLQSFYMTVKCNSISKAAKALHVTQPGLSMQLQNLEKELGVSLLNRSNKGVELTEEGKV 63 Query: 74 FHSQIRHLLQ---QLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 +L +E +L L+ Q+++ I + S+ LP I Sbjct: 64 VFDYANTMLSIQGNIERDLKSLQE----EQQRLIIGSCKSVGEYALPCSIYTFKKFNKKV 119 Query: 131 IEAIDV---DEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +DV E ++KLR+ S I + L E + +L V D E + Sbjct: 120 DINLDVSNSSEVIEKLRD-HSINIGIIQYDPLDETQIITKTIISDELVLVANLDNTPEEI 178 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVALDGCGIA 245 + PL+ +NS L+ LT+H + + + E +K + G G + Sbjct: 179 SLDEVKNLPLILREKNSGTRYLLENELTKHDLKIEDLNVIYSLNSPEAIKSSIMSGKGFS 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMN 281 +LP ++QE++ G L + + + Y A+R N Sbjct: 239 FLPRLVVKQELKEGTLKTIKIKDFKVTFDYYIAFRKN 275 >UniRef50_Q5WIP7 LysR family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WIP7_BACSK Length = 293 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 24/291 (8%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F T K +NFS+AA S ++QP+ S I+ LE +GV LF R + L+ +G + +S I Sbjct: 10 FYTTAKEQNFSKAASSLFITQPSVSHAIKQLETQLGVSLFIRHSKGVFLTTEGNVLYSYI 69 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLS----LGLLPSIISQMPPLFTWAIEAI 134 + +E+ L+ I IA++ S+ L +PS + + P L + Sbjct: 70 KQAFAHIETGERHLQSLKALESGSITIASSDSICKHYLLPRVPSFLKRWPKL-DIKFQHG 128 Query: 135 DVDEAVDKLREGQSD---CIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLA 191 + + KL +G+ D +++D+ PF + LF CAS + + L N Sbjct: 129 STPDIMKKLEQGRIDIGIVHLPINEKDVEITPFTST----TCLF--CASPTY-KTLHNGT 181 Query: 192 Q-----PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 +PL+++S S + R + + +FS ELL + A G GI + Sbjct: 182 HSLTELTRYPLVSFSAGSSTRSFLERLFQQQGQ-TFSPELEVGSIELLIECAKLGMGIGF 240 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY--RMNTRMNPVAERFWREL 295 + + I++E+ G+LV + D + IP + A + ++ A RF+ L Sbjct: 241 VAKELIKKELEQGELVEIPVD-IAIPTREIALITKKAAPLSIAARRFYSHL 290 >UniRef50_B1KND7 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=B1KND7_SHEWM Length = 291 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 23/266 (8%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 K L F+ + NF A N +QP+ S RI ALE+ +GV+LF R +P+ L+ +G+ Sbjct: 4 KRLETFMWVAVLGNFRLTAEKMNTTQPSISARIIALEEELGVKLFERDNSPVSLTSKGQE 63 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEA 133 ++ ++ E L E+ + +++ + ++ LP+ ++++ LF Sbjct: 64 ILPYVKKIMHMTEQ-LKEVADENSPLCGLLRLGVSETIVHTWLPTFLNKIHNLF----PK 118 Query: 134 IDVDEAVD---KLREG--QSDCIFSFHDEDLLEAPFDHIRLFESQLF----PVCASDEHG 184 +DV+ VD LREG +F + ++ +++ L E L P + Sbjct: 119 LDVEITVDVTTNLREGLLSQSLDLAFLMGPVSDSKIENVDLCEFSLIWVANPKLGMAKMT 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFST---FFVSSMSELLKQVALDG 241 ++ L+Q +P++ Y+RN+ R + EL+ F SS+S L+ V DG Sbjct: 179 TSIEQLSQ--WPVITYARNT---RPYEDISNKFRELNIPPPRLFSCSSLSACLRMVT-DG 232 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRD 267 G++ LP+ I E+ +GKL +++ + Sbjct: 233 IGVSPLPKQMINTELANGKLEIVDTN 258 >UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIQ6_9GAMM Length = 301 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 20/255 (7%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F T+ K NF+ AA ++ A S++I LE +GV L NR + +E G++F ++ Sbjct: 10 FTTVVKANNFTNAAHQLGLTPSAVSKQISLLEDRLGVRLLNRTTRSVSPTEAGQLFFNRC 69 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF-TWAIEAIDVD 137 LL+ LE ++ + +KI+A + +L I +Q + + D Sbjct: 70 SRLLEDLEEAEHMVKDLETSPRGTLKISATPTFGRAMLMKIFAQFLEQYPDVNFDLTLAD 129 Query: 138 EAVDKLREGQSDCIF--SFHDEDLLEAPF--DHIRLFESQLFPVCASDEHG--EALFNLA 191 + +D +REG I S D L+ P + L S+ + EHG EAL L Sbjct: 130 KGLDLVREGIDLAIHLGSLQDSRLVARPVARQKVILVGSKEYLA----EHGQPEALNELV 185 Query: 192 QPHFPLL----NYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 HF L+ +++ ++ R I + + F+ + ++ E AL+G G+A L Sbjct: 186 N-HFILMVSGIDFAEPRWIKRFIKEAGLSNKDRRFTVNDLDTLCE----AALNGMGLAAL 240 Query: 248 PEYAIQQEIRSGKLV 262 P Y I++ + SGKLV Sbjct: 241 PVYMIREHLDSGKLV 255 >UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=Clostridium RepID=A6LQS5_CLOB8 Length = 324 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 27/270 (10%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L FLT+ K ++F++AA + +Q + + +I+ LE +GV+LF R + L+ + Sbjct: 27 MDFKQLNAFLTISKLQSFTKAADNLGYAQSSITTQIKLLESELGVKLFERIGKNITLTHE 86 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 GK + +L +L S + +D + I AA SL + LP I+ + L+ Sbjct: 87 GKKLLPYAKQIL-KLSSAVKNAVLNTDVPSGTLTIGAAESLCVLRLPEILKEYKKLY--- 142 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNL 190 +D+ L+ G F ++++++ F S F + E E + L Sbjct: 143 -PEVDIS-----LKFGNCAEFKYFLNDNIIDVAFSLGVKINSAEF--ISEIEIPEPMLLL 194 Query: 191 AQPHFPLLN----YSRN--------SYMG---RLINRTLTRHSELSFSTFFVSSMSELLK 235 A P PL+N + ++ + MG R + + + + + +K Sbjct: 195 AYPGHPLINKKEVFPKDIESEPLILTEMGCSYRATLENILNSCNIKPNVAIETGSVQAIK 254 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLN 265 Q + G GI LP+ A+ EI SGKLV LN Sbjct: 255 QFTMSGLGITLLPKVAVDDEINSGKLVPLN 284 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 29/272 (10%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + L F ++ + R+FS+AA +SQPA S +I++LEQ +GV LF R ++L+E Sbjct: 2 DVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELTE 61 Query: 70 QGKIFHSQIRHLLQQLESNLA---ELRGGSDYAQR-KIKIAAAHSLSLGLLPSIIS---Q 122 G+ LL L+ LA ELR AQR ++++AA+ + + ++P + + Sbjct: 62 AGRQLLPYAERLLNLLDEALAAVHELR----CAQRGQVRVAASTTAGIYVVPKALGAFHR 117 Query: 123 MPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFD-HIRLFESQLFPVCASD 181 P +++ ++ +L G +D L+E P D I F V AS Sbjct: 118 AYPGVELSLDVLNRFAVHQRLLAGDADVAIM----GLIEDPQDLEIEQFLPNELVVIASP 173 Query: 182 EHGEALFNLAQPH-FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSEL------- 233 H +LA+ H PL +R ++ R I E F+ +S + Sbjct: 174 RH-----HLARRHQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGA 228 Query: 234 LKQVALDGCGIAWLPEYAIQQEIRSGKLVVLN 265 +KQ G+A +P AI E+ +G+L+VL+ Sbjct: 229 IKQAVAADLGVAVMPRDAIGLELETGRLIVLD 260 >UniRef50_C5CV21 Transcriptional regulator, LysR family n=3 Tax=Variovorax paradoxus S110 RepID=C5CV21_VARPS Length = 348 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 122/274 (44%), Gaps = 18/274 (6%) Query: 26 RNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQL 85 R+FS+AA+S +S+ SR + LE GV L NR L L++ G++ + L+ Sbjct: 17 RSFSRAAISLGMSKATVSRYVAELETRSGVRLLNRSTRSLSLTDAGQVLLDRSTELVAMA 76 Query: 86 ESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA-IEAIDVDEAVDKLR 144 E+ L +L+ + Q +++++A H L G L +I++ L+ + + ++ +D + Sbjct: 77 ENTLNDLQAHGSHPQGRLRMSAPHGLIAGWLSDVIAEFIQLYPDVYVSLVFTNDDLDLIE 136 Query: 145 EGQSDCIFSFHDEDLLEAPFDHIRLFESQLFP----VCASDEHGEALFNLAQP----HFP 196 EG D L D + L +L P VCAS + A P Sbjct: 137 EGI--------DIHLTGGRIDDMNLIVRRLVPFDMVVCASPAYWARRGIPAVPEDLGRHD 188 Query: 197 LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEI 256 +L+YS L T + E+ + ++ + L ++AL G G+A++PE Q + Sbjct: 189 VLSYSAKPTT-HLPFETGGKAVEVPVHSRMEANDAVALIELALRGAGVAYVPEPLAQSHL 247 Query: 257 RSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAER 290 G LV + R+ + YA R N A R Sbjct: 248 ERGALVPVLREHMPSDHWLYAAYSQRRHNSAAMR 281 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 3/155 (1%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 L N+ + L F+TL + ++F++A+ ++SQPA S I+ +EQ G LF+R LQL Sbjct: 20 LMNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQL 79 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP--- 124 S +G+ F R LL + +L + Q KI++A S ++ P ++ Sbjct: 80 SPEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREY 139 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDL 159 P ++E + ++ +D +REGQ + +F + + Sbjct: 140 PDINISVEDVVMESVIDAVREGQVELGITFEPDQM 174 >UniRef50_B7H4B0 LysR substrate binding domain protein n=10 Tax=Gammaproteobacteria RepID=B7H4B0_ACIB3 Length = 303 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 55/273 (20%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+T+ + +F +AA ++++ A S+ I LE +GV LF R L ++++G +F+ Sbjct: 11 FVTVVEAGSFVKAAEQLHLTRSAISKNIARLEDQLGVALFKRTTRSLSMTDEGALFYEHS 70 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDV-- 136 R L ++++ A L QRKI +S+ +L + P + +A + D+ Sbjct: 71 RRALSEIQNAAALLD------QRKINATGRLRMSVPVLFGQLFAAPLMVKFAQQHADLQL 124 Query: 137 -----DEAVDKLREGQSDCIFSFHDED---LLEAPFDHIRLFESQLFPVCASD------- 181 D VD + EG CI D L+ P R+ +CAS Sbjct: 125 EISFNDRNVDLIEEGFDLCIRIGALPDTTQLVAKPIGEHRML------LCASPDYLNKAG 178 Query: 182 --EHGEAL---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELL-- 234 EH E L +A PHF G++ L + ++ F+ ++LL Sbjct: 179 PVEHIEDLDQHATIADPHF-----------GQMQKWRLQKEND---EPLFIKPKAKLLLN 224 Query: 235 -----KQVALDGCGIAWLPEYAIQQEIRSGKLV 262 K AL GIAWLP++ IQ E++ GKLV Sbjct: 225 DLQAIKNAALADAGIAWLPDWLIQNELQDGKLV 257 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 19/264 (7%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+ TK L + L + ++F QAA+ ++SQ A S I +E IG LF R ++L++ Sbjct: 5 NLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAVELTD 64 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRK---IKIAAAHSLSLGLLPSIISQ---M 123 G +F I H + L LR +D Q + + +AA SL+ LLP + ++ + Sbjct: 65 AGHVF---IAHAQEILRDTQRALRAVTDTVQLRTGSVTVAALPSLAASLLPKVFAEFTRI 121 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD-- 181 P ++ A D +R+G+ D F+ D + + +L E Q F +C D Sbjct: 122 HPGVRLSLLDTLSGPAFDLVRDGKVD--FALTAADPKQEDLAYEQLMEDQFFLICPDDHP 179 Query: 182 --EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSELLKQVA 238 +H + +P ++ ++ + + I+ L HS+ L F+ F + + Sbjct: 180 LSKHAGPVAIENTLDYPHVSMPSSASVRQYIDADL--HSKGLYFAPVFEVDHIATIGALV 237 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLV 262 G GI+ LPE A+ +++G+LV Sbjct: 238 SAGLGISALPETAVSL-LQAGRLV 260 >UniRef50_A4XFH5 Transcriptional regulator, LysR family n=3 Tax=Sphingomonadaceae RepID=A4XFH5_NOVAD Length = 304 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 75/270 (27%), Positives = 124/270 (45%), Gaps = 32/270 (11%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L FL + + R F++AA VSQP SR+IR LE +GV+LF R P+QL+E Sbjct: 1 MEIRHLRYFLAVVEMRGFTRAADHLGVSQPPLSRQIRDLEVELGVDLFERGTRPVQLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPPL 126 G++ Q ++ L+ +R + + + S+ G +P++I + MP + Sbjct: 61 GRLLFEQATPVVAALDQIKPTIRRWKQLRRPRFAVGVVGSILHGDMPAMIRRFRAMMPEV 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFS--------------FHDEDLLEAPFDHIRLFES 172 IE I + E V L+ G+ D F + ++ P D L E+ Sbjct: 121 EVELIEMITL-EQVAALKTGRIDAGLGRVRIDDPAIVREVLFEEPLMVAVPVDSA-LAEA 178 Query: 173 QLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSE 232 Q PV + GE + + P P +Y+ + MG L R++ + ++ V + Sbjct: 179 Q-GPVPIAALEGERV--ILYPSQPRPSYA-DQVMG-----LLARNAVVPAASREVREVQT 229 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIRSGKLV 262 L VA+ G G+A +PE Q R G +V Sbjct: 230 ALGLVAV-GEGVAIVPEALSQT--RHGNIV 256 >UniRef50_B1YFC0 Transcriptional regulator, LysR family n=3 Tax=Bacillales RepID=B1YFC0_EXIS2 Length = 307 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 134/289 (46%), Gaps = 15/289 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L FL + + +++ AA +Q + ++ LEQ++G E+F LQL+ Sbjct: 1 MEIRHLATFLKIIETGSYTAAAAELGYTQSTITSHMQTLEQSVGGEVFTYFNRKLQLTAL 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRG--GSDYAQRKIKIAAAHSLSLGLLPSII---SQMPP 125 GK ++ L + L + +++ +D +++AA SL++ L +I SQ P Sbjct: 61 GK----ELIPLAEDLLATHDKIKNMQKTDVLCGTLRVAAPESLTISRLGPVIKRFSQHHP 116 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD--EH 183 + E ++L G+ D +E H+ L E ++ V A D EH Sbjct: 117 DVKLILTNGTCGENQEELLNGRVDVAMMLFPAMAVEKCLHHV-LTEEKIVMVGAPDAPEH 175 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + + H + N SY + + LT+ + LSF T + S+ + K++ + G G Sbjct: 176 FKDIQKKQSDHVYITNEQGCSYR-TMFEQHLTKQNLLSFQTMELWSIGAI-KKMVMSGLG 233 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERF 291 A LP +Q+E+ +G L ++ +DE PI ++ + ++P+A F Sbjct: 234 FAVLPYITVQEELENGSLKIIKQDEAFEPIYSHILIKKKKWVSPIAHAF 282 >UniRef50_C6B6X6 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B6X6_RHILS Length = 302 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 8/174 (4%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F+ + R+ S+AA N+SQPA SR IR LE + GV LFNR ++LS G + Sbjct: 4 LRQFVEVANQRSISRAAKKLNISQPALSRAIRQLEDSYGVPLFNRTGAGVELSVYGSALY 63 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLFTWAIE 132 S+ +L L+ E+ A+ I+IA L +LP II S+ P +E Sbjct: 64 SRAVRILPALDEAKEEIEHLQGRAKAVIRIATGDLWGLVILPGIIKAFSRTHPGVVVHVE 123 Query: 133 AIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 D + +R G D +F S+ E +++ F+ L + C D H Sbjct: 124 IADDGTRFEGMRHGVYDLVFGTLSYKYEAVMQVEFE--TLARQATYIYCHKDHH 175 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 119/249 (47%), Gaps = 15/249 (6%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 +IE + L FL + K +F++AA N+SQP+ S++IRALE +G+ LF+R + L+E Sbjct: 8 SIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLTE 67 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPL 126 G++ S + + ++E + ++ + + I + ++ LLP I ++ P Sbjct: 68 AGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYPN 127 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSF---HDEDLLEAPFDHIRLFESQL---FPVCAS 180 ++ + E +KL + + D +F D++++ P L++S+L P S Sbjct: 128 IELSVLGLRTGEIREKLLQNELDIGITFLPVQDKEIVSIP-----LYKSELTLVVPTSHS 182 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 + + +PL+ +N Y+ LI + +S+M L++ VA Sbjct: 183 LTERKYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQMVA-Q 241 Query: 241 GCGIAWLPE 249 G GI LP+ Sbjct: 242 GMGITVLPK 250 >UniRef50_Q8EL24 Transcriptional regulator (LysR family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EL24_OCEIH Length = 291 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 18/255 (7%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F+ L + +NF++ A R++SQP S I+ LE L R + L+ +G++F+ Sbjct: 6 LETFIVLAREKNFTRTATKRSLSQPTVSVHIKNLENEFATSLIQRTTKRVHLTPEGELFY 65 Query: 76 S---QIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF---TW 129 +I + QQL+ +L + + A I++ A+ ++ LLP +I+ + + + Sbjct: 66 EHALKIWNQYQQLQEHLYQKK---QTASGLIRVGASFTIGEYLLPEVIAILQKQYEQLDF 122 Query: 130 AIEAIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 + + ++ +D +R + D S + +D+L+ F E +L VC S E+ Sbjct: 123 YVTIGNTEKIIDSVRRLEVDIGLVEGSNYTKDVLQTSFK-----EDRLVIVC-SPEYETN 176 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 NLA H R L + +E+ + V S ++ +K +G G+A Sbjct: 177 FKNLADLHHHKWVIREEGSGTRQYFDHLVQSNEIQVKSTLVISSTQGIKNSVTNGLGLAL 236 Query: 247 LPEYAIQQEIRSGKL 261 L E I++E+ G L Sbjct: 237 LSEATIKEELAHGTL 251 >UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=Burkholderia cepacia complex RepID=A9AT14_BURM1 Length = 300 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 13/251 (5%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 +E L F+ + + F +AA +++QP SRRI+ LEQA+GVELF R + L+ Sbjct: 2 KVENSELEAFVAVAELGTFHRAAEKLHLTQPGLSRRIQKLEQALGVELFQRTTRSVTLTG 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PL 126 G+ F R + QL L+ ++ ++ K+++++ ++ LLP ++ Q PL Sbjct: 62 VGRQFLPMAREQIAQLGMMLSSIQEIAEKRYGKVRVSSIPTVVAQLLPKVLLQYAEKYPL 121 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFH---DEDLLEAPF--DHIRLFESQLFPVCASD 181 I + D + ++R G ++ S H DEDLL P D L + P+ +D Sbjct: 122 IGVQILDGNHDFVLSQVRAGIAEFGVSLHPGDDEDLLFEPLFPDRYVLAVHRDDPLAQAD 181 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 G L L H L+ R+S RL+ L + F+ + + G Sbjct: 182 --GVTLAELR--HARLVIGGRDSG-NRLLLEMLMGQEAVRLRWFYEVEHISCVAALVAAG 236 Query: 242 CGIAWLPEYAI 252 G A LP A+ Sbjct: 237 VGCAILPRSAV 247 >UniRef50_P39127 HTH-type transcriptional regulator citR n=3 Tax=Bacillus subtilis group RepID=CITR_BACSU Length = 291 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 142/303 (46%), Gaps = 43/303 (14%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL+ F+T K NF + A + +SQP + I+ LE+ I +LF R+ +QL+++ Sbjct: 1 MDFKWLHTFVTAAKYENFRKTAETLFLSQPTVTVHIKQLEKEISCKLFERKGRQIQLTDE 60 Query: 71 GKIFHSQIRHLLQQLESNLAEL-RGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 G+ + LL E+++AEL R Y+Q +++A + ++ +LPS++ + + T Sbjct: 61 GRAYLPYALRLLDDYENSMAELHRVRQGYSQ-TLQLAVSPLIADTVLPSVMKRYTAMNTE 119 Query: 129 --WAIEAIDVDEAVDKLREGQSD--------------CIFSFHDEDLLEAPFDHIRLFES 172 A+ + E ++ G++D C + D +L AP D R E Sbjct: 120 TEMAVTIFESAEIASLIKAGEADIGLSCLKVQSSSLSCHCLYKDPVVLVAPPDK-RFIE- 177 Query: 173 QLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSM-- 230 D +A L Q + LL ++ Y L+ R ++F FV +M Sbjct: 178 --------DNEIDAKEVLEQ--YLLLTHNHPDYWDDLL-----RQVRMTFP--FVRTMKV 220 Query: 231 --SELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVA 288 + + K+ +G G+++LP +++E+ +++ + + +P A AY + N Sbjct: 221 TQTHITKRFIKEGLGVSFLPLSTVKRELAEKQMIRIPYQSVQLPY-AGAYAIALYENKKE 279 Query: 289 ERF 291 ++F Sbjct: 280 KKF 282 >UniRef50_Q6F9H5 Putative transcriptional regulator n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F9H5_ACIAD Length = 309 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 33/269 (12%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 K + +F + + +F++AAV N +QPA S+R+ + EQ +GV+L R LQL+++GK+ Sbjct: 4 KSIENFYWVARLNSFNKAAVKLNTTQPAVSQRLNSFEQELGVKLLERTSRSLQLTDKGKV 63 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ----------- 122 + + QL +L + + Q I++ A ++ L I Q Sbjct: 64 VYEYAEKYI-QLNQDLLKALSENKAIQATIRLGVAETIVHTWLVDFIEQVQLEFPQVTID 122 Query: 123 ----MPPLFTWAIEAIDVDEAVDKLREGQSDCI---FSFHDEDLLEAPFDHIRLFESQLF 175 + P+ A+++ ++D A DCI L AP H R QL Sbjct: 123 IVINITPVLKQAVQSGELDMAFLLESGCDFDCIELPLCEFQHSFLIAPRFHKRFMSRQL- 181 Query: 176 PVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLK 235 +L +++Q +L Y + +Y + + LT H T S++ L+K Sbjct: 182 ----------SLKDISQT--TILTYPKTTYPYVDLKKQLTLHQFKEPKTITSYSLATLIK 229 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVL 264 +G GI +P ++ E+R +L +L Sbjct: 230 MTE-EGMGIGIIPHLSVIHELRERRLQIL 257 >UniRef50_C8PZE4 Ben operon transcriptional regulator BenM n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZE4_9GAMM Length = 317 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 8/161 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+ + K +FSQAA + +SQP+ SR ++ LE +GVEL +R P+ L+ Sbjct: 1 MDISQLTYFVVVAKAGSFSQAAKTLAISQPSLSRHVQQLESELGVELLDRYHRPMTLTAA 60 Query: 71 GKIFHSQIRHLLQQLE--SNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPP 125 G F +QI +L QLE S L + R + + I S+ GLLP IIS Q P Sbjct: 61 GHFFLAQIEPILLQLEQASELTQ-RFAQPHRSNHLTIGFVASVLYGLLPEIISTVKQRHP 119 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFS--FHDEDLLEAPF 164 + I+ ++ + L+ G D F H+++ ++ F Sbjct: 120 NLDIKLVEINSEQQMSALKSGDIDVGFGRFRHNDNFVQQIF 160 >UniRef50_Q0HUM5 Transcriptional regulator, LysR family n=20 Tax=Gammaproteobacteria RepID=Q0HUM5_SHESR Length = 293 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 29/258 (11%) Query: 18 DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQ 77 +F+ + + NF+ AA NVS SR+I ALE +G +LF R + L+E+G I++ Sbjct: 9 EFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRH 68 Query: 78 IRHL---LQQLESNLAELRGG-SDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIE- 132 R L L++ E + +L+G + +A + LL + Q P ++E Sbjct: 69 CRQLQTGLEEAERAITDLKGSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYP-----SVEF 123 Query: 133 AIDVDEAVDKLREGQSDC---IFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFN 189 +D+ L EG D + D L+ P S+ + AS + E Sbjct: 124 NVDLTNRTLDLIEGGYDLAIRLGKLADSSLMAKPLS------SRTHYMAASPSYVE---K 174 Query: 190 LAQPHFPLLNYSRNSYMG-----RLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 QPH N +G R I R + + + L+ AL G GI Sbjct: 175 YGQPHTLSELNQHNCLIGNHNYWRFIEN--GRERNIKVRGNLICNSGYALRDAALKGIGI 232 Query: 245 AWLPEYAIQQEIRSGKLV 262 LP+Y I+++I +G+L+ Sbjct: 233 VQLPDYYIEEDIHAGRLI 250 >UniRef50_B4EDR0 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EDR0_BURCJ Length = 337 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 + + F+ + + +F +AA N+S SR + LE +GV L NR + L+E G + Sbjct: 10 RAMRTFVKVAQTSSFIKAANLLNMSVGVASRHVALLEDELGVRLLNRTTRKVSLTEAGAL 69 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI--ISQMPPLFTW-- 129 F + +L +L+ L+ + A +++++A P++ IS++ PL T Sbjct: 70 FTESCQRVLDELDEALSISTSTTRPATGRLRVSA---------PTVFAISRLAPLLTLYR 120 Query: 130 ------AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS--- 180 I+ + VD VD + E CI H L + + E F +CA+ Sbjct: 121 TSYPDVTIDLMLVDRPVDLVEEQLDVCIVPAHHVKSLNVVSRPLTISE---FHICATPSY 177 Query: 181 -DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMSELLKQVA 238 +HG L L Y + ++ + + E+ + S+ LL++ A Sbjct: 178 LSDHGAPLHPSDLADHAFLAYRSDHREEVMVFKDAADVAVEVLPKSAVTSNNFGLLRESA 237 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLV-VLNRDELVIPIQAYAYRMNTR 283 L GIA LP Y +Q +I G+LV VLN E +P+ + +TR Sbjct: 238 LADLGIAMLPAYIVQHDIAEGRLVQVLN--EFQLPVSEHRIVYSTR 281 >UniRef50_Q62XD4 Transcriptional regulator CitR n=3 Tax=Bacillus RepID=Q62XD4_BACLD Length = 292 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 66/305 (21%), Positives = 137/305 (44%), Gaps = 32/305 (10%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL+ F+T K NF + A + +SQP + +I+ LE+ +G +LF R+ + L+++ Sbjct: 1 MDFKWLHTFVTAAKYENFRKTAETLFISQPTVTVQIKLLEEELGCQLFTRKGRSIHLTKE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ + LL+ ES++AEL + + +A + ++ +LP ++ + L + Sbjct: 61 GRAYLPFALRLLEDYESSMAELHRIRQGYSQTLNLAVSPLIADTILPFVLKKYTALHPNS 120 Query: 131 IEAIDVDEAVD---KLREGQSD--------------CIFSFHDEDLLEAPFDHIRLFESQ 173 + + E+ + + G +D C + D +L AP D Sbjct: 121 EIKVKIAESAEIAPLISAGHADIGLSCLNVQSSNLNCYSMYSDPVILVAPHDG------- 173 Query: 174 LFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSEL 233 A+++ + LL ++ Y L+ + + F + S + + Sbjct: 174 ----RAAEQAPPLDVEDLLEEYLLLTHNHPEYWDDLVRQLRIK---FPFVRTMLVSQAHI 226 Query: 234 LKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 K+ +G GI++LP +++E+ G+L+ + D + +P+ A Y ++ + N E F Sbjct: 227 TKRFISEGLGISFLPLSTVRRELMEGRLIEVPCDFMKLPV-AGGYAISLKDNEKVEHFLA 285 Query: 294 ELREL 298 L E Sbjct: 286 FLAEF 290 >UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B9KUK0_RHOSK Length = 300 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 17/252 (6%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N E L FL + +F +AA + N+SQPA +RR++A E +G +LF R + L+ Sbjct: 4 NFELLDLRTFLAIIDLGSFRKAAEALNISQPALTRRMQAFEYKLGNQLFERSTRNVSLTN 63 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTW 129 G+ R L +++ L I IA + +L LPS+I + F Sbjct: 64 VGREIEPMARRTLAEIDEQFGSLSDAGATRSGFISIACIPTSTLSFLPSVIGRFQTDFPR 123 Query: 130 A-IEAIDVDEA--VDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 A +D A +D + +G +D +F + ++ F LFE + +CA + Sbjct: 124 ARFRILDNSSAQVLDSVFDGTADFGLTFTGQS--DSQFKFTALFEDEFVALCAPGDPIAQ 181 Query: 187 LFNLAQPH---FPLLNYSRNSYMGRLINRTL--TRHSELSFSTFFVSSMSELLKQVAL-- 239 +A PL+ +R+S NRTL TR S+ + ++ ++ V L Sbjct: 182 KARIAWSELNTLPLIGVNRSSG-----NRTLMDTRLSKDGIKLNWAHEVNHVIAAVGLVR 236 Query: 240 DGCGIAWLPEYA 251 G++ +P A Sbjct: 237 QAVGVSVVPRMA 248 >UniRef50_B4RYM7 Probable transcriptional regulator n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RYM7_ALTMD Length = 287 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 21/256 (8%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+ + K F++AAV+ +++QPA S I+ +E+ +G +LF R + L+ +G++ Sbjct: 4 FVEVAKSSTFAEAAVNLHLTQPALSSAIKKMEEQLGGKLFKRNTRNVSLTPEGEVLFPNA 63 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLFTWAIEAID 135 LL ++ ++++ A+ ++ I A S + LPSI+S + P I + Sbjct: 64 LRLLHDWDNTFSDIQNLFAMAKGQLTICAMPSFAESHLPSILSAFHKRTPNVNLRIVDVV 123 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHF 195 +++ + ++ G+S+ FSF E F LF Q F V A+ + L N P + Sbjct: 124 MEQVIHEVTTGRSEIGFSFEPERKDGLVFK--SLFADQ-FVVVANSSQAKYLSN--APSW 178 Query: 196 ------PLLNYSRNSYMGRLINRTLTRHSELSF--STFFVSSMSELLKQVALDGCGIAWL 247 PL+ +R S + L R EL+ T +S++ +L++ +G GI+ + Sbjct: 179 QDCLLHPLVMMNRGSAVRHWTQSQLARFGELNIIAETGQLSTLGKLIQ----NGLGISIM 234 Query: 248 PEYAIQQEIRSGKLVV 263 P Q ++ LVV Sbjct: 235 PAIC-QSQMEGLGLVV 249 >UniRef50_B1ZVT1 Transcriptional regulator, LysR family n=3 Tax=Verrucomicrobia RepID=B1ZVT1_OPITP Length = 321 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 11/259 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++++ L F L +C++F+ AA ++Q A S I+ALE +G L +R + L++ Sbjct: 12 LDSRQLLAFAALARCQSFTLAAKELFLTQSAVSHAIKALEAEVGSRLVDRANRRVLLTQA 71 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ F + +L+++E+ A L S + ++++ A+ + LLP+++ + P Sbjct: 72 GEQFLRHVEKILREMEAARAGLDALSRWGHGRLRVGASTTACQYLLPTVLREFKQSFPKS 131 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 IE D V+ L+ + D E E FD + LF+ +L + S H Sbjct: 132 VITIEPGDHATQVELLQSNRIDLAIMLQPETRGE--FDFVPLFQDEL-RLLTSPVHAWVQ 188 Query: 188 FNLAQPHF----PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 P ++ Y++ SY RL+ R ++ F + +K++ G G Sbjct: 189 QERTTPGSLAAETIVLYNKASYTFRLVTDYF-RQERMTIGHFIELGSMDAIKELVKIGVG 247 Query: 244 IAWLPEYAIQQEIRSGKLV 262 + L + + E+ +G LV Sbjct: 248 VGVLAPWVARAELENGALV 266 >UniRef50_C1DJP6 LysR family transcriptional regulator protein n=8 Tax=Proteobacteria RepID=C1DJP6_AZOVD Length = 311 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 29/284 (10%) Query: 27 NFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLE 86 NF++AA V++ S RI+ LEQ I LF+R ++LSE G+ ++ +L E Sbjct: 6 NFAKAARQLGVTRSVISHRIQQLEQFIQAPLFHRSSRHVRLSEVGETYYQDCVEMLAGFE 65 Query: 87 SNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTW-AIEAIDVDEAVDKLRE 145 +R Q +++I + ++ L ++++ L+ +E + D VD ++E Sbjct: 66 RLTENMRNLRAKPQGRLRIQVTSAFAIDYLGYLLAEFMQLYPGIELEVVVQDRIVDLIQE 125 Query: 146 GQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV----CASDEHGEALFNLAQPHFP--LLN 199 G D F A D L E QLF V CAS + L N A P P LL Sbjct: 126 G-FDVALQF-----FPALVD--TLVERQLFRVRRIFCASPGY---LRNHAAPCHPGDLLR 174 Query: 200 YSRNSYMG-----RLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQ 254 ++ Y G + + R E++ SS LL+ AL G GI LP + Sbjct: 175 HTIGLYDGYPSRYQFVFRRGDERLEINLPGQVRSSSVHLLRDFALGGAGIVCLPSLVAGK 234 Query: 255 EIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 E+ +G+LV + D +V +A+R + P +R ++R+L Sbjct: 235 ELLAGRLVPVLGDYVV---GTFAFRA---VYPTTQRGSLKVRKL 272 >UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVL6_9BACL Length = 302 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 78/307 (25%), Positives = 133/307 (43%), Gaps = 36/307 (11%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E++ L+ FL + + +F++AA + +Q + + +I+ALE IG+ LF+R + L++ Sbjct: 1 MESRHLFTFLVVVEAGSFTRAAQQLDYAQSSVTAQIQALEAEIGLPLFDRIGRKIVLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 G+ + + + E L ++ A +KI A SL+ LP +I Q PL Sbjct: 61 GRRLLPYAQEIAKIHEMAKNALHPAAEMAG-SLKIGAPESLAAFRLPEVIRHYRQRYPLV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIF----SFHDEDL-----------LEAPFDHIRLFES 172 ++ E D +R G+ D F D DL L AP DH E+ Sbjct: 120 QIVLKPGQCWELRDLVRSGELDVAFLLQPEVEDRDLQIETLVHEPMALVAPADHPLRHEA 179 Query: 173 QLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSE 232 ++ P D+ +L+ L R L H S+ E Sbjct: 180 EVVPDQLKDQ-------------TILHTESGCSYRTLFERYLNSHGVFPDPNLEFWSI-E 225 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELV--IPIQAYAYRMNTRMNPVAER 290 +KQ + G G+++LP ++ E+ GKLV LN ++ + Q +R R +P E+ Sbjct: 226 AIKQCVMSGLGVSFLPLVTVRSELAEGKLVKLNWNDESQRVATQLALHRKKWR-SPALEQ 284 Query: 291 FWRELRE 297 F +RE Sbjct: 285 FVLMIRE 291 >UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T3V7_CAUSK Length = 294 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 29/298 (9%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 +I + F+T+ +F++AA +SQPA + RIR E+++G+ LF+R ++L+ Sbjct: 2 HITLGQIRAFVTVASTFSFTRAAEVLGLSQPALTNRIRQFEESLGLRLFDRSTRSVELTN 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PL 126 G+ R L+ + E + R + + +++A S + LLP +I++ P Sbjct: 62 VGRELLPIFRRLVGEFEGAVINARDYASKVKGVVRLACLPSCAATLLPDLIARFQIDNPS 121 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 T+ +E +RE + D F D + RLF+ L V EH A Sbjct: 122 ATFVVEDALNSRVATMVREDRVD--FGIGMADGEAGDLELTRLFDDTL-QVVHPREHPIA 178 Query: 187 LFNLAQ----PHFPLLNYSRNSYMGRLI-------NRTLTRHSELSFSTFFVSSMSELLK 235 + H+PL+ +R S + L+ RT T E++ ++S+ L++ Sbjct: 179 QAPVIDVETLSHYPLILMNRGSSVRDLVEGAFLAAGRTATPACEVT----YMSTAVALVR 234 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNR--DELVIPIQAYAYRMNTRMNPVAERF 291 G G++ LP A+ E+RS V D + R N + PV E F Sbjct: 235 A----GLGLSILPSTAV--ELRSQPDVAARSIDDPAFVRTLVLVRRRNAPLRPVVEAF 286 >UniRef50_Q0B1K1 Transcriptional regulator, LysR family n=2 Tax=Burkholderia ambifaria RepID=Q0B1K1_BURCM Length = 301 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 15/262 (5%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 ++ ++ ++ L T+ +C +F A+++ NVSQPA +R ++ +EQAIG+++F R L+ Sbjct: 5 LIPDLSSRELQAVCTIAECGSFMAASITLNVSQPALTRTVQRVEQAIGLDIFRRTTRRLE 64 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQM 123 ++ G+ F + +L L ++ +R +D + ++ ++ S++ LP II S+ Sbjct: 65 ITAAGEEFVALANRILADLRISVDSMREITDELRGQVIVSTVMSVACIHLPGIIARYSKS 124 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 P I + V+ +R G +D ++ D+ + I+L + F V + H Sbjct: 125 KPRVEIQIREGVYGKIVEDVRGGVADFGITYIDD--VPNELSTIKL-AIEAFHVVMPNGH 181 Query: 184 ------GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQV 237 G +L + HFP+++ + S R + L L S + Q Sbjct: 182 PLSKKPGISLEEAS--HFPMVSMPKESQTRRHLE-GLALAGGLVLQHAVTVSQFATVMQC 238 Query: 238 ALDGCGIAWLPEYAIQQEIRSG 259 G G+A LP A+ + +G Sbjct: 239 VQAGVGLAILPGGAVPSALSAG 260 >UniRef50_Q15VE5 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15VE5_PSEA6 Length = 297 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 21/262 (8%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+ + L F+ + + F++AA +SQPA S I+ +E+ +G LF+R +QLS Sbjct: 2 NVSYRQLQAFIQVAQSATFAEAAQKMFLSQPALSSAIKKMEEQVGGGLFSRTTRKVQLSP 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPP 125 +G+ F L+ + +L+ + K+ IAA S ++G LP+I+ SQ P Sbjct: 62 EGQDFLPVAIRLMNDWQDAFGDLQQVFSMGRGKLSIAAMPSFAVGHLPAILGAFQSQFPN 121 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPF-----DHIRLFESQLFPVCAS 180 + A+ I +++ ++ + E + F+F E L F D +L P+ S Sbjct: 122 VKV-AVADIVMEQVINAVSEERVALGFTFETEQLDGLLFHPMFTDEFIAVLPKLHPL--S 178 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSEL--LKQV 237 + LAQ F +N G I R + H E L V+ S+L L Q Sbjct: 179 QQSSVTWNALAQSPFIAMNR------GSAIRRWVDNHYEALELKVNMVAEASQLATLGQF 232 Query: 238 ALDGCGIAWLPEYAIQQEIRSG 259 G G++ +P QQ R G Sbjct: 233 VEHGLGVSIVPGLCQQQMQRLG 254 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 31/269 (11%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 + L F + + +F++AA N++QP+ ++++ ALE + V+LF RQ + L+ G++ Sbjct: 14 QHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLTPVGEL 73 Query: 74 FHS---QIRHLLQQLESNLAELRG-GSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPL 126 + Q+ HL+Q+ E + E R GS + + H++ L LP +++ + P Sbjct: 74 VYDYARQVIHLVQRCEEAVREYRSPGSG----SVTVGCVHTIGLFTLPELLAAYVREHPR 129 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIR-----LFESQLFPVCASD 181 ++ + E V L G+ D L+ P H R LFE L V Sbjct: 130 VKINVKTGNNRETVTMLLHGEVDV-------GLVTTPQVHERIEVVPLFEDPLVVVAGPS 182 Query: 182 EHGE---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMS--ELLKQ 236 + + N P + Y R + ++ L E+ FV E +K Sbjct: 183 FAADLPPVVSNADLAQLPFIGYVRGARFRMTTDQVL---EEMGIQPQFVMEFDNHEAIKT 239 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLN 265 + G GIA P A+Q+E+ SG+LV LN Sbjct: 240 MVALGFGIALEPVSAVQRELISGQLVRLN 268 >UniRef50_C6RKS4 Transcriptional regulator, LysR family n=2 Tax=Acinetobacter radioresistens RepID=C6RKS4_ACIRA Length = 311 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 1/113 (0%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L F+T+ + N ++AA N+ QPA SR+I+ LE+ +GV+LFNR + L+E Sbjct: 1 MDIKQLRTFVTILEVENLTKAAAMLNIVQPAVSRQIQMLEEELGVKLFNRSRHGMALTED 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM 123 GK+ R +L+++E+ EL + K+ I S+S LL ++I ++ Sbjct: 61 GKLLEPYARRILEEVETAKLELTANKGMIRGKVHIGVLSSIS-ELLSALIMKL 112 >UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cepacia complex RepID=B1YXM2_BURA4 Length = 302 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 24/269 (8%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F + + + S A +VSQPA +R +R LE +G+ LF+R + L+E GK+ + Sbjct: 6 LLAFYEVARAGSISAGAERLHVSQPAVTREVRELEDRLGIVLFDRMPRGVALTEGGKLLY 65 Query: 76 ---SQIRHLLQQLESNLAELRG-GSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAI 131 S+I L E LAEL G GS + +KI A+ +L + +P I+ F Sbjct: 66 EYASRIFTLADTAEKELAELAGLGSGH----MKIGASGTLGVFFVPEAIAA----FNARH 117 Query: 132 EAIDVDEAV---DKLREGQSDCIFSFHDEDLLEAPFD----HIRLFESQLFPVCASDEHG 184 + +D V +++ G D F+ +E PFD H R S V A+ H Sbjct: 118 PRVAIDLTVTNTERVEAGLHDLSFTI---GFIEGPFDDSILHARRIGSDEIAVVAAAGHP 174 Query: 185 EALFNL-AQPHFPLLNYSRNSYMG-RLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 A + A+ R G R I R + L S +E +K++ L Sbjct: 175 LAGTKVRARDLVDRTVIMREPGSGTRAIIEESYRRAGLEIEPLMSVSHTEAIKRMLLSQH 234 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVI 271 +A++ ++ E+R G+L ++ +++ I Sbjct: 235 ALAYISTLSVADELRRGELAIVEVEDMRI 263 >UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD1_9GAMM Length = 297 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 13/247 (5%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 +I + F T+ + +F++AA+ +SQPA S ++ LEQ++G +L R + L+ Sbjct: 2 SIPINQIVVFTTVARTGSFAEAAIQLYLSQPALSVAMKNLEQSLGGKLLARTTRSVTLTP 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPP 125 +GK F+ R LL + E ++ ++R + K+ IAA + + LP I+ SQ P Sbjct: 62 EGKAFYPVARRLLSEWEQSMQDVRNHFALGRGKLDIAAMPTYTTNFLPKILAEFHSQYPN 121 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH-- 183 + + + + V +RE +S+ +F ED AP H + F +H Sbjct: 122 IHI-TVHDVIAENVVQMVREERSELGITFAPED---APDLHFQPLYQDRFVAILPFKHPL 177 Query: 184 --GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 + L + +P L+ R + +LI++ L L F + + + V +G Sbjct: 178 LEKQTLKWIDLLAYPHLSLQRPAGTRKLIDQALQEKGLLLTPAFESHQLVSIGRMVN-EG 236 Query: 242 CGIAWLP 248 G++ +P Sbjct: 237 LGLSVVP 243 >UniRef50_C6D8F3 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8F3_PAESJ Length = 292 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 121/257 (47%), Gaps = 21/257 (8%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E L FL + + + ++AA S +++QPA S I LE +GV LF R+ L+++ Sbjct: 1 MELTQLEYFLRVARTEHLTRAAESLSITQPALSHSILKLEAELGVPLFERKGRSLKINRY 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ---MPPLF 127 G +F + +LQ++E E+ S+ I +A + L + L+P +I + + P Sbjct: 61 GMMFSKHVERILQEVERGKKEIEEHSNPESGVIHLAYLNILGVDLIPKLIREYQLINPAI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCA-----SDE 182 T+ + D ++++ EG +D + + E + ++ + + L+ V + +D+ Sbjct: 121 TFELSQGDKGAILNQVEEGHADLMVT--SEQPVNDTYEWVPMLSLPLYLVVSKEHRLADQ 178 Query: 183 HGEALFNLAQPHFPLLNYS---RNSYMGRLINRTLTRHS-----ELSFSTFFVSS---MS 231 L + F L ++ +NS + R+ + T S +L FV++ +S Sbjct: 179 ESIHLGEITGEPFVGLKHNCSLKNSLLARVHHSNFTLASTYDAEDLQTVAGFVAAGLGIS 238 Query: 232 ELLKQVALDGCGIAWLP 248 L + L+ GI W+P Sbjct: 239 VLPRTAGLNLEGIKWIP 255 >UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=Pectobacterium RepID=C6DBU7_PECCP Length = 299 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 5/172 (2%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+ K L F+ L + NF++AA N+SQPAFS I LE+ +G LF+R +QL+ Sbjct: 2 NLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLNA 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF-T 128 G F R L+Q + + E++ + + KI +A S+++ LP +++Q + Sbjct: 62 DGLHFIDIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLAQYHRAYPK 121 Query: 129 WAIEAIDV--DEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVC 178 +E +D D + + +G++D + F LF + +C Sbjct: 122 IKVELLDTQWDRCLKAVLDGRADLALTAGQPS--PGTFSSRMLFADSFYLIC 171 >UniRef50_C0CW79 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW79_9CLOT Length = 306 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/273 (23%), Positives = 123/273 (45%), Gaps = 29/273 (10%) Query: 24 KCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQ 83 +C + ++AA +SQPA S I LE+ +GV+LF+R TPL + G+ + + R +L Sbjct: 14 QCGSVTKAARKLFISQPALSSYINKLEEELGVKLFDRSATPLVCTYAGEQYLKRARAILM 73 Query: 84 QLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDV------- 136 QL+ E R + Q ++++ + +LP I +PP F IDV Sbjct: 74 QLDDMDREFRDIATNCQGRLRLGFPGERLIYMLPLI---LPP-FKERFPGIDVEVTSGPG 129 Query: 137 DEAVDKLREGQSDCIFS---FHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQP 193 + ++ LR G +D +F D+D+ + +++ + +L VCA + + Sbjct: 130 NRLIEGLRNGDTDFVFLPQWSKDKDIAQ-----VKMTDEELVLVCARGYLPDECILDREK 184 Query: 194 H---------FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 H P + + + ++ L +++ + F S + L ++A G G+ Sbjct: 185 HIVNWRKAARLPFITLEKGHALRASVD-VLAKNAGVQPDIFLESHSNMLSCRLAAKGMGV 243 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA 277 A +PE ++ G+L V + E + + +A Sbjct: 244 AVVPEITLELVKEGGELDVYHLSENPLTWEVFA 276 >UniRef50_Q2BJY7 Putative transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJY7_9GAMM Length = 301 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 128/278 (46%), Gaps = 18/278 (6%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F + K ++F A R V+ S+ I LE+ +GV+L R L L+E G+ F Sbjct: 10 FAQVVKLKSFRAVAEQRGVASSVVSKHISRLEKHLGVQLLIRTTRKLNLTEAGREF---F 66 Query: 79 RHLLQQLESNLA-ELRGGSDYAQRK---IKIAAAHSLSLGLLPSIISQMPPLF-TWAIEA 133 RH QQLES++A R S +A++ ++IAA LP++I + L+ +E Sbjct: 67 RHC-QQLESSVALAERAVSQHAEQPQGLLRIAAPMISGQYFLPAVIDEYLRLYPDMRVEM 125 Query: 134 IDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHG--EALF 188 I D D + G + L ++ RL ES+ + + D HG A+ Sbjct: 126 IIKDSFQDLVSSGFD---LAIRTGTLSDSSLRARRLVESRWYAYASPDYLQTHGTPSAID 182 Query: 189 NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLP 248 +LA + +Y + T + ++ F +S L++ ++ G GIA++P Sbjct: 183 DLALHNCLQFSYQETGPHEWPVT-TGGKPGKVKVQGRFEASSLVTLREASVSGMGIAFMP 241 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP 286 Y ++++++ G+LV + +D + + YA N R P Sbjct: 242 VYLVREQVKQGQLVAVLQDHIYRDVGIYAIYPNIRYVP 279 >UniRef50_A9KS97 Transcriptional regulator, LysR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS97_CLOPH Length = 292 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 125/263 (47%), Gaps = 13/263 (4%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 K + F+ + + ++FS AA SQ A S +I LE+ +G LF+R ++L+ G I Sbjct: 4 KNIQTFIKVSELKSFSLAASELGYSQSAVSTQISNLEKELGHLLFDRIGHKIELTANGVI 63 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTWA 130 F +++ E ++L G +D I+IA A S+ + P I+S P Sbjct: 64 FLQYTQNIQLLTEDLHSQLNGCTDDIAGTIRIAMADSICTSIFPKILSDFQKHYPKVKIV 123 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFP-VCASDEH---GEA 186 I+ E L + D +F+ + ++ P D + L ES + S +H G+A Sbjct: 124 IKTGVTSELFTLLTHNEVDMLFTLDFK--MQRP-DFVILKESAINTNFYISSKHPLAGKA 180 Query: 187 LFNLAQ-PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 ++ +P+ N + ++ + H E T+ + ++ +++K++ L+ GI Sbjct: 181 NVTISDIKQYPIYLTEENISYRKKLDDLIAEHDEFIIPTYEIGNV-QVIKELILNSFGIG 239 Query: 246 WLPEYAIQQEI-RSGKLVVLNRD 267 ++PE+ +++E+ + L + NRD Sbjct: 240 FIPEFVVEKELAQKSILPISNRD 262 >UniRef50_A1RHL4 Transcriptional regulator, LysR family n=21 Tax=Shewanella RepID=A1RHL4_SHESW Length = 337 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 36/293 (12%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F + + +FS AA +S+ S ++ LE +GV+L R L L+E G + + Q Sbjct: 35 FTHVARAGSFSAAARRLGISKSKVSTQVADLEHRLGVQLIQRTTRSLSLTEAGHLLYLQG 94 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLS----LGLLPSIISQMPPLFTWAIEAI 134 LL+ E +A + +D + +K+ + S + LPS +++ P L ++ Sbjct: 95 EELLRDAEQAIASVHNLNDATRGVLKVGISQSFGAMHIIPALPSFMAKHPEL---ELQVS 151 Query: 135 DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIR--LFESQLFPVCASD---EHGEALFN 189 +D VD + EG D + + + + P + L + Q V + D +HGE Sbjct: 152 LLDHKVDVVSEGL-DLLLTMSE----QLPLGMVARPLMKCQFLLVASPDYVAKHGE---- 202 Query: 190 LAQPHFP--LLNYSRNSYMGRLINRTLTR------HSELSFSTFFVSSMSELLKQVALDG 241 P P L++++ Y G ++ + + E+ S F + LK A+ G Sbjct: 203 ---PTRPEQLVDHNCLVYQGEWHEHSMWQFKKGDDYCEIGVSGNFRVDNAPALKSAAISG 259 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELV---IPIQAYAYRMNTRMNPVAERF 291 G+ +L Y ++ EI G LV L +D + +P+QA Y + P F Sbjct: 260 LGVVYLASYLMEDEITKGTLVPLLKDWQLTHHLPLQA-VYPRRKHLAPKVSAF 311 >UniRef50_Q2GAY9 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GAY9_NOVAD Length = 308 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 5/147 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L FL + R+FS+AA + N++QP SR IR LE+ IG LF+R PL ++ Sbjct: 1 MDLRQLRQFLAVANARSFSRAAETLNIAQPPLSRTIRHLEEEIGGALFDRTARPLAMTPL 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPPL 126 G++ H Q R +L ++ ++ + +R+ I S LP +I + P + Sbjct: 61 GQLLHEQARQILDRMGDMHDMMKAAAATERRRFTIGFVASTIYARLPELIRAFRKRAPDV 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFS 153 +E+ + E + L++G+ D F Sbjct: 121 ELTLVESSTL-EQLAALKDGRIDVGFG 146 >UniRef50_D0L1H0 Transcriptional regulator, LysR family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1H0_HALNC Length = 294 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 17/250 (6%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 +I+ + + FL++ + +FS AA +++QPA S+R+ LE +G LF R + L+E Sbjct: 5 HIDHQQILAFLSVAQTGSFSAAAQQLHLTQPAVSKRVALLESQVGAALFERLARQVVLTE 64 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPL 126 G F + + Q ++ A S ++ IA +H + L LLPS++ S+ P Sbjct: 65 FGAQFLPAAQKVRQAMDDLAAVTLDSSRPLSGRLAIALSHYVGLHLLPSVLETFSRRYPD 124 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAP--FDHIRLFESQLFPVCA---SD 181 + +D + A+D + +G + AP + L++ +L P+ A ++ Sbjct: 125 VVLDLRFMDSEAAIDAVAQGSVRLAYGTLGHS---APSTVETTPLWQEKLVPLVALRHAE 181 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 +H L LAQ H P++ + ++ + I+ L + L V +++L L G Sbjct: 182 QHTPTLHELAQ-HLPVIAPAAHTSTRQSIDIWL---NALQIRPLAVIEVNQLDSIALLVG 237 Query: 242 CGIAW--LPE 249 GI W LPE Sbjct: 238 TGIGWGVLPE 247 >UniRef50_UPI0001AEC4E8 probable transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC4E8 Length = 294 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 118/245 (48%), Gaps = 10/245 (4%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + + F+ + K F++AAV+ +++QPA S I+ +E+ +G +LF R + L+ Sbjct: 2 DVSYRQIKAFVEVAKSSTFAEAAVNLHLTQPALSSAIKKMEEQLGGKLFQRNTRNVSLTP 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPL 126 +G++ LL ++ ++++ A+ ++ I A S + LP+I+S Q P Sbjct: 62 EGEVLFPNALRLLHDWDNTFSDIQNLFAMAKGQLTICAMPSFAESHLPNILSVFHQRIPN 121 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH-GE 185 I + +++ + ++ G+S+ FSF E F + E + A H G+ Sbjct: 122 VNLRIVDVVMEQVIHEVTTGRSEIGFSFEPERKDGLVFKSLFADEFVVVTNKAQSAHLGD 181 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSF--STFFVSSMSELLKQVALDGCG 243 L PL+ +R S + L ++ EL+ T +S++ +L+ L+G G Sbjct: 182 KLHWQDCLKLPLVMMNRGSAVRHWTQSKLAQYGELNIIAETGQLSTLGKLI----LNGLG 237 Query: 244 IAWLP 248 I+ +P Sbjct: 238 ISIMP 242 >UniRef50_C6CDQ4 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDQ4_DICDC Length = 302 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 31/159 (19%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L +F+ L + NF++AA N++QP SR ++ +E+ G ELF R + L+ Sbjct: 1 MKIQLLREFIMLSESLNFTRAAQKMNITQPVLSRHMKEMEEIFGTELFRRDTHKVALTSA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G++ S++R ++QQ +S+++ +R + ++ HSLS+ L I Q+ Sbjct: 61 GELLFSEVRKVIQQYDSSVSVMRTFTGQSR--------HSLSITFLGEAIRQL------L 106 Query: 131 IEAID-----------------VDEAVDKLREGQSDCIF 152 +E +D +DEA+ L EGQ D F Sbjct: 107 VELVDNFQRQHQEVMVDCRDSELDEALVLLEEGQCDLGF 145 >UniRef50_B0V4K3 HTH-type transcriptional regulator n=13 Tax=Acinetobacter RepID=B0V4K3_ACIBY Length = 299 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 3/146 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+T+ + NFS+AA+ +QP+ S++I+ LE+ +GV L NR ++L+E+ Sbjct: 1 MELRHLRYFITVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVRLLNRTKRKVELTEE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F R L Q + +A R S Q+ ++I + + P ++ + P Sbjct: 61 GEVFLEHARLTLAQADKAVAMARQVSKAKQQLLRIGFVPIAEMKIFPYVLPNLRLQHPDL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFS 153 T + +++ E + L+ G+ D F+ Sbjct: 121 TIELSSLNNAEQLKALKRGELDITFT 146 >UniRef50_A1RF10 Transcriptional regulator, LysR family n=5 Tax=Shewanella RepID=A1RF10_SHESW Length = 342 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 31/266 (11%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 K + F T+ + + S AA N+S A S+++ LE +G+ LF+R L L+E G + Sbjct: 26 KGMIVFATIAEKGSMSAAAQQLNLSSSAVSQQVTKLEMDMGISLFHRNTRNLTLTEAGSL 85 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPS----IISQMPPLFTW 129 F+ R ++ ++S +L ++KIAA GLL +++ P + Sbjct: 86 FYENCRKVISIVDSTEQKLNNLKGIPSGELKIAAPVGFGGGLLSEPFQYLLATHPQI--- 142 Query: 130 AIEAIDVDEAVDKLREG--QSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + D +D + +G + CI D +L+ R+ +C S ++ Sbjct: 143 SLNLVMQDGPIDIVNDGIDLAICIGPLSDSNLIARHLADWRML------LCTSPDYLPMH 196 Query: 188 FNLAQPH----FPLLNYSRNSYMGRLINRTLTRHS-----ELSFSTFFVSSMSELLKQVA 238 N+ P F +N+ N G L LT H EL+ V++M L+ Q+ Sbjct: 197 HNIKHPSELAAFNRINH--NYTKGEL----LTHHPSLECFELTGQRISVNNMQTLI-QLT 249 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVL 264 LDG G A LPE + + G LV L Sbjct: 250 LDGLGYAALPEPEVLDYLDKGVLVPL 275 >UniRef50_A8G944 Transcriptional regulator, LysR family n=8 Tax=Enterobacteriaceae RepID=A8G944_SERP5 Length = 302 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 77/294 (26%), Positives = 115/294 (39%), Gaps = 28/294 (9%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L FL + +NFS AA V+ A S+ IR LE+ + + LF R + L+++GK Sbjct: 11 LPAFLAAAQAQNFSAAARQLGVTPAAISKNIRVLEEKLALRLFQRNTHNVVLTDEGKALL 70 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAID 135 Q+ L Q L + L ++++ +L +I Q F ID Sbjct: 71 QQVAPLWQALSATLETAGSAQQAPSGTVRVSMIPGFGRQMLMPLIPQ----FLERYPQID 126 Query: 136 VDEAVDK-----LREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFP---VCASDEHGEAL 187 +D ++D + EG I S D D RL L+P V A+ A Sbjct: 127 LDLSLDARVVNLVGEGFDVGIGSRVDPD--------SRLVARSLYPMQMVLAASPGYLAQ 178 Query: 188 FNLAQPHFPLLNYS----RNSYMGRLINRTLTRHSE---LSFSTFFVSSMSELLKQVALD 240 + Q LL ++ RN GR + L + E L V+S E+L AL Sbjct: 179 HGIPQDPQDLLQHNCLLHRNPATGRSVKWPLQQQGEAKALELQGRLVASRPEMLLDAALA 238 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRE 294 G GI L + + G L + D P Q + Y + + P R W E Sbjct: 239 GLGIVCLARWYAEHHFAQGTLQPVLADCWPRPTQLWLYYASADLPPRV-RVWVE 291 >UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RU53_9GAMM Length = 297 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 25/253 (9%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T+ L F+ + + +FSQAA +++QPA S+R+ LE+ +G ELF+R + L+E Sbjct: 1 MDTQNLKAFILVAETGSFSQAAEKLHLTQPAVSKRVALLEEQLGTELFDRIGRIISLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 GK Q + + + L++ +R + ++++A +H + L LP ++ SQ P Sbjct: 61 GKALLPQAKSVERALDAAEQSVRDLAGDVAGQLRLATSHHIGLHRLPPVLSSFSQTFPEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSD-CIFSFHDED--------LLEAPFDHIRLFESQLFPVC 178 I+ +D ++A + + +G+ + + + ++ + + P D + + +L Sbjct: 121 HIDIDFMDSEQAYELISQGKVELAVVTLAPKEQTNVISLPVWQDPLDFMIAKDHELL--- 177 Query: 179 ASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS---ELSFSTFFVSSMSELLK 235 G A P + N+Y G++I R H E+S +T ++ E ++ Sbjct: 178 ---RSGNTPDLQAMSRHPAILPGLNTYTGQIIKRLFDSHGLQLEVSLATNYL----ETIR 230 Query: 236 QVALDGCGIAWLP 248 +A G G LP Sbjct: 231 MMASVGLGWTILP 243 >UniRef50_A9GLA2 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLA2_SORC5 Length = 299 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 22/290 (7%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L D L + + + ++AA + + A S+++R +E+ GV LF R ++LS G+ Sbjct: 5 LEDVLMVARSGSVAEAARRLHKTPSAISQQVRRVEERFGVALFERDGRGVRLSPAGEAAL 64 Query: 76 SQIRHLLQQLESN---LAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM----PPLFT 128 I L Q E L+EL G +++AA+ L GLL +I QM P+ Sbjct: 65 GAITRLFDQAEGVFELLSELAG---EPSTTLRVAASDYLGKGLLVPVIRQMLEKRAPV-R 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 +AI + +A + G+ D S DL++ P LF V + Sbjct: 121 FAITTANSVDAARGVERGEVDLGLASASSAGGDLVKQP-----LFVQPFLWVGPRLKGTA 175 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 H PLL + S R+++ L R ST VSS+S L+ V+ G GI Sbjct: 176 PALRERLRHEPLLRLAPGSVGRRMLDAYLDRERIRPISTIDVSSVSLLVSYVS-GGLGIG 234 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 P A+ + RS +L V + +P++ R N R NP+ ERF L Sbjct: 235 LAPALALTEVARS-RLDVEVAEVDPLPVE-LMTRENFRRNPIVERFVERL 282 >UniRef50_A9KDY0 Transcriptional regulator, LysR family n=3 Tax=Coxiella burnetii RepID=A9KDY0_COXBN Length = 292 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 20/283 (7%) Query: 26 RNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQL 85 ++FS+AA+ VS+ S +I ALE+ + V+L +R L L+E+G +F ++ + Sbjct: 17 KSFSRAALELGVSKGYVSTQITALEKDLMVKLLHRTTRHLTLTEEGNLFLESCAKIVHEK 76 Query: 86 ESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLRE 145 + ++ L+ +K+ A S+ L ++ + + ID V L + Sbjct: 77 KLAISLLKESQAEPSGHLKVTAPPSMCNTFLTELLPKFQKKYPKISLTIDPSSTVKNLLQ 136 Query: 146 GQSDC---IFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFP------ 196 D I + DE+ + R+ + F VCA+ + L P P Sbjct: 137 HGIDLALRITTTPDENYIA------RMITTFRFVVCATSNY---LKQRTIPKTPDDLSQH 187 Query: 197 -LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQE 255 L YS + R + ++ VSS S ++K+ L GIA LP+Y + +E Sbjct: 188 NCLIYSADPIQNRWPFQIKNSTKIVTVKGSLVSSNSLIIKKALLANQGIARLPQYILTKE 247 Query: 256 IRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELRE 297 I GKL VL + + I + YA Y ++ P + F L++ Sbjct: 248 IEEGKLEVLFSENMKIEMPVYAIYASAVKLPPKIKCFIAFLKQ 290 >UniRef50_A4W7U5 Transcriptional regulator, LysR family n=26 Tax=Gammaproteobacteria RepID=A4W7U5_ENT38 Length = 317 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 75/270 (27%), Positives = 119/270 (44%), Gaps = 28/270 (10%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 NI +WL F+ + + +NFS A +S SR I LE AIG +LF R + +E Sbjct: 6 NISIRWLRFFIDVYETQNFSVVARREGISASQVSRVIHQLEDAIGQQLFYRNTRAVMPTE 65 Query: 70 QGKIFHSQIRHLLQQLESNLAEL----RGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP 125 G +F R + LE EL R S + + LP++ + P Sbjct: 66 SGHLFVRYARTVTGSLEDARRELDERTREPSGVIRMNAPVFFGQRHIAPWLPALAERYPR 125 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS----D 181 L ++ D+ +D ++ +D IF +L ++ F H R+F Q + + AS Sbjct: 126 L---NLDLTLTDDYIDPHKDA-ADVIFRI--GELTDSSF-HARIFGQQFYHLAASPAYVQ 178 Query: 182 EHG--EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFV-----SSMSELL 234 +HG E +LA+ L Y +S NR L R ++ + V S+ +E L Sbjct: 179 KHGAPEGPADLARHQ--CLVYRGSSGP----NRWLARQPGGAWVHYPVTPRLSSNNAETL 232 Query: 235 KQVALDGCGIAWLPEYAIQQEIRSGKLVVL 264 AL G GI P++ I + ++ G+LV L Sbjct: 233 LIAALGGMGIVLFPDWLIGERLQRGELVAL 262 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 3/143 (2%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F + + +F++AA+ ++SQPA S I+ LE+A+G +LF R + L+ +GK F+ Sbjct: 11 FSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLTPEGKAFYPVA 70 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTWAIEAID 135 R LL E +L ++R + K+ IAA + ++ LLP I++ P + + Sbjct: 71 RRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYPNINVTVHDVI 130 Query: 136 VDEAVDKLREGQSDCIFSFHDED 158 + V+ +RE + + +F +D Sbjct: 131 AESVVEMVREHRCELGVTFDPDD 153 >UniRef50_D0SSL1 Transcriptional regulator n=2 Tax=Acinetobacter RepID=D0SSL1_ACILW Length = 302 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 85/159 (53%), Gaps = 5/159 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+T+ + NFS+AA+ +QP+ S++I+ LE+ +GV+L NR ++L+E+ Sbjct: 1 MELRHLRYFITVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVKLLNRTKRKVELTEE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G +F Q R L Q + +A R S Q+ ++I + + P I+ + Sbjct: 61 GAVFLEQARLTLAQADKAVAMARQVSQAKQQMLRIGFVPVAEMKIFPYILPNLRVQNSDL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFH--DEDLLEAPF 164 + +++ +E + L++G D F+ H + D +E+ F Sbjct: 121 KIELLSLNNNEQMRLLKKGDLDLTFTRHNFNSDEIESQF 159 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 82/316 (25%), Positives = 138/316 (43%), Gaps = 48/316 (15%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N + L FL + + FS+AA + ++Q A SR + LE+++GV L +R + L+ Sbjct: 2 NYTLRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLTH 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPP 125 G+ + LL QL+ L + R ++ + ++ IA A ++S L+P + +Q P Sbjct: 62 AGQALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYPE 121 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFS------FHD----EDLLEAPF------DHIRL 169 + + + D ++++R G D F HD E L+ PF DH L Sbjct: 122 IRLTVRDNVQAD-GIEQVRAGGVD--FGVLIDPLVHDGLTIEPLVTDPFCFVCRRDH-PL 177 Query: 170 FESQLFPVCASDEHGEALFNLAQPHFPLLN--YSRNSYMGRLINRTLTRHSELSFSTFFV 227 + + P A D L + A PL++ + R+ + R++ EL S V Sbjct: 178 AQEKTVPWSALDGMRLVLLDFASGSRPLIDRVFGRHGIVPRVVQ-------ELGHSA-SV 229 Query: 228 SSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLV---VLNRDELVIPIQAYAYRMNTRM 284 M E G G + LP Y++ S LV ++ R+E I R + + Sbjct: 230 FGMVEA-------GIGASVLPTYSLPLPAAS-PLVWRPLVPREERRI---VMVRREDRSL 278 Query: 285 NPVAERFWRELRELEI 300 +P AE W +R L I Sbjct: 279 SPAAEAVWALVRNLTI 294 >UniRef50_A1ZLC1 Transcriptional Regulator, LysR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLC1_9SPHI Length = 301 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K + F L NFSQAA ++SQP SR I+ALE +G LF R ++L+++ Sbjct: 1 MELKHVEYFFVLANELNFSQAAKKLHISQPPLSRHIKALEAELGTTLFYRNTQSVRLTKE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G++F+ + + LL Q++ +++L+ A +++I L LP ++ Q P Sbjct: 61 GELFYEEAKALLSQVKGAVSKLKTIVKSAPTQVQIGFVRPAMLLFLPGLLKTFRQSHPHI 120 Query: 128 TWAIEAIDVDEAVDK-LREGQSDCIFS 153 I I+ E L Q D FS Sbjct: 121 QVNITEINYPETTKSMLLNNQLDAAFS 147 >UniRef50_A6NRJ5 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NRJ5_9BACE Length = 294 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + T L F+ + C NFS+AA +++QPA S +I LE +GV+LF+R ++L+++ Sbjct: 1 MNTTQLECFMEVANCLNFSRAAEHLSITQPAVSHQINTLENELGVKLFHRTSKSVRLTQE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G +F LL+ + A ++ A ++ I +++ L LL ++S Q P Sbjct: 61 GFLFTQYAGELLKMTAISKARVKEYQREAPMRLVIGCRNTMELWLLRPVLSRLRQTRPEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD 181 + I D + EG +FSF D +A + L Q+ +CA D Sbjct: 121 LPILRLIPFDAMENLQEEGSIHVMFSFRDSAPQKARYQE--LLRCQIACICAPD 172 >UniRef50_B9QSF7 LysR substrate binding domain protein n=3 Tax=Rhodobacteraceae RepID=B9QSF7_9RHOB Length = 316 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 122/259 (47%), Gaps = 9/259 (3%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+ + + FL + + A+ NV+ A +R+I LE+A+G++LF R ++LS+ Sbjct: 12 NLYSPAMRYFLAAAEAGSIRAASRELNVASSAVNRQILWLEEALGLQLFERVGRRMRLSQ 71 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPL 126 G++ + IR E +AEL + + IA+ S++ LLP++IS + P Sbjct: 72 AGEVLLAHIRRTYSDFEGTVAELDALKGLRRGTVSIASVESVAERLLPAVISSFRRTYPG 131 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDL--LEAPFDHIRLFESQLFPVCA-SDEH 183 + EA K+ ++D F+F D+ L A F H + + + P +DE+ Sbjct: 132 IHVNVSVSSSQEAARKVEAAEADVGFTFDPPDMSTLTAAFHHDLVIGAVMAPNHPLADEN 191 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 G L + + +P+ + + I+ +R S + +S+ L++ +A D Sbjct: 192 GLGLADCLR--YPVALPAEGLSIRARIDVIRSRIPGASMTYVEANSL-RLMRALARDENV 248 Query: 244 IAWLPEYAIQQEIRSGKLV 262 I + + +++I +G L+ Sbjct: 249 IGFQTQIGCEEDIEAGHLI 267 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 36/301 (11%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + LY F+ + K + +QAA +V+Q A SR+I LE+ +GV+LF ++ LQL+ Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G++F + +L LE + E+ D + +I++ HSL + ++P +++ ++ P Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + +G+ D F I F + VC E L Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAF--------------ISPFPDEHEQVCGEVLLTEEL 166 Query: 188 FNLAQPHFPLLNYSR---------------NSYMGRLINRTLTRHSELSFSTFFVSSMSE 232 F + P PL Y R I + + + F +E Sbjct: 167 FAILPPSHPLAGEQEIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETE 226 Query: 233 LLKQVALDGCGIAWLPEYAIQQE--IRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAER 290 ++ + G G++ LPE A+ ++S K+ V R V +R N +M VA+ Sbjct: 227 TIRGLVAAGMGVSLLPEMALYHAGVLQSAKVRV--RTPNVTRNIGIIHRSNEKMPLVAKV 284 Query: 291 F 291 F Sbjct: 285 F 285 >UniRef50_A7AXW3 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXW3_RUMGN Length = 295 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 5/162 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 IET+ + FL + K +N ++AA +++QP SR++ LE+ IG LF + PL L+ + Sbjct: 2 IETRLMQYFLAVAKEQNITKAAKVLHITQPTLSRQMAMLEKEIGATLFIKGSRPLSLTNE 61 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G + + +L L AE+ G + + + I ++ L II ++ PL Sbjct: 62 GYLLRRRAEEVLDLLAKTEAEVSCGKEELEGTVTIGCGEIAAVQYLAKIIEKFHEIHPLV 121 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRL 169 + I + D+ ++ EG SD D+ + +++IR+ Sbjct: 122 VFDIYTANADQIRQRMDEGLSDIGLLLEPSDIEQ--YEYIRM 161 >UniRef50_O33945 Probable cat1 operon transcriptional activator n=9 Tax=Proteobacteria RepID=CATR_ACILW Length = 303 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 6/145 (4%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+ + + RNF++AA N++QP SR+I+ LE+ +GV L R P+QL++ G++F Q Sbjct: 9 FVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQLTDAGRLFFEQA 68 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM----PPLFTWAIEAI 134 +L ++E A R + + + I S G+LP+++ ++ P L +E + Sbjct: 69 IQVLGRVEQMQAATRRVGLHQRSVLSIGFVASTLYGVLPTLMRKLRQHAPELDIQMVELM 128 Query: 135 DVDEAVDKLREGQSDCIFS-FHDED 158 V + + + EG+ D F H D Sbjct: 129 SVQQ-IQAINEGRIDIGFGRVHHSD 152 >UniRef50_C4GDC9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C4GDC9_9FIRM Length = 314 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 72/307 (23%), Positives = 135/307 (43%), Gaps = 31/307 (10%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+ L K NF++A+ +SQPA S+RI++LE+ +GV LFNR + L+ + Sbjct: 1 MDITKLNSFIVLAKKGNFARASELLYISQPALSKRIQSLEEELGVPLFNRIGSRSYLTVE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ F + ++ + +LR + + A + + + ++PS IS+ + Sbjct: 61 GQNFLRYAQQMVSTYNLAVEDLRQINGLETGTLNFGATNFIGVYIMPSFISRFHKKYPKI 120 Query: 131 IEAIDVDEA---VDKLREGQ------SDCIF--SFHDEDLLEAPF--DHIRLFESQLFPV 177 + ++ + +D L + Q SD I + L PF D ++L P+ Sbjct: 121 HINMIINNSRTILDMLHKNQLEFAAISDYILRDKTSRDQYLSCPFVKDRLKLVVGNAHPL 180 Query: 178 -----CASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSE 232 C+ + L+ ++ ++ S + + RHS F V S E Sbjct: 181 FSRGHCSLKDVENELY---------ISKTKYSSQNQFLEEIFQRHS-FDFKNRMVISNQE 230 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIP--IQAYAYRMNTRMNPVAER 290 +K+ ++ G++ L ++ QE+ +L L+ DE I IQ Y + + P A Sbjct: 231 AVKECVINNIGVSILSTRSVTQEVLHQRLATLSFDEFEIERNIQ-YTCLKDRHLTPAARI 289 Query: 291 FWRELRE 297 F LR+ Sbjct: 290 FLDFLRQ 296 >UniRef50_Q7WPW7 LysR family regulatory protein n=4 Tax=Bordetella RepID=Q7WPW7_BORBR Length = 297 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 + HNI+ + L F L + +F AA S V+QP+ S IR LE +GV L +R + Sbjct: 7 VSHNIKYRQLKAFRILAESGSFKHAADSLAVTQPSMSIMIRELESDLGVALIDRATRSAE 66 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--- 123 L++ G+ F+ QI+ L QLE + +++IA SL+ + + I++M Sbjct: 67 LTDAGRDFYQQIKGSLDQLEKAYSYANAAGKAEHGRVRIATLTSLAAEAVTTAIARMHAE 126 Query: 124 -PPL-----------FTWAIEAIDVDEAVDKLREGQSDCIFS--FHDEDLLEAPFDH 166 P + F A+ +VD V L E +D F F D+ ++ P H Sbjct: 127 RPGIQIELMERTYFNFLLALRRREVDLGVGILHEAHADLDFQYLFSDQLVVVTPKGH 183 >UniRef50_Q13PB2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13PB2_BURXL Length = 304 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 11/264 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L FL + + +F+ AA + + +Q S RIR LE+++GV LF+R QL+ + Sbjct: 1 MEIRQLQTFLRIVETGSFAAAAEALHATQSTVSARIRELERSLGVALFDRSQHRAQLTAK 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G + R ++ L + + E G SD +++ ++ LP++IS M P Sbjct: 61 GSELVTLARQMV-LLGAQIRERIGASDALVGTLRLGVVGLVAATWLPALISAMRARYPRV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRL----FESQLFPVCASDEH 183 + AIE + ++++R G+ + + L E F+H+ L F P + Sbjct: 120 SIAIEVALTNTLIERVRNGEMEV--AIVTGPLHEPAFEHVHLGHDAFAWMAAPSLVTPLP 177 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 E L +P+L S S+ +I R R + +++ S +L + + G G Sbjct: 178 REPLQAADLLRWPILGLSAASHHYPVIERWF-RDAHVAYRPVISCSTVRVLADLTIAGLG 236 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRD 267 + LP A ++ +G+L V+ + Sbjct: 237 TSLLPVNAYAADVAAGRLQVIATE 260 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 14/259 (5%) Query: 2 DDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQ 61 D+C + NI+ + L F+ + ++F AA S ++SQPA +RRI+ LE +GV L R Sbjct: 8 DNCVGRM-NIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERT 66 Query: 62 VTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS 121 + L+ G+ F + R +L LE++L +R ++ + IA + + LP +IS Sbjct: 67 TRRVSLTAVGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVIS 126 Query: 122 QMP---PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVC 178 P + I +E + + ++D + D + FD L E C Sbjct: 127 AFTEEFPAIRFRIFDAGANEVLQSILNREADFGITLLGADDPDVTFDP--LIEEPFLLAC 184 Query: 179 ASD-----EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSEL 233 D + +LA F + R S +++ L R + S F V +S Sbjct: 185 RRDHPLARQESVTWADLAAHRF--VTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTS 242 Query: 234 LKQVALDGCGIAWLPEYAI 252 L V G G+A LP A+ Sbjct: 243 LGLVEA-GLGVAALPRMAL 260 >UniRef50_A8H7F3 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H7F3_SHEPA Length = 300 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 80/309 (25%), Positives = 135/309 (43%), Gaps = 46/309 (14%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F L +CR+FS+AA ++QP+ +R I+ +EQ +GV+LF R ++L+ Sbjct: 1 MDLRHLKHFSALAECRSFSKAAEKLEITQPSLTRSIQKMEQDLGVQLFTRDSRQVKLTYH 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLS---LGLLPSIISQMPPLF 127 G I ++L ++ +++R S K+ I S LG L + + P Sbjct: 61 GGIVLKHSDNILNRVHLLESDIRVNSGKLAGKLVIGGGTLTSSRILGELLNEFVKYSPSI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDC------IFSFHDEDLLEAPFDHIRLFESQLFPVCASD 181 + + A DV E L +G+ D + F D LE + C S Sbjct: 121 SVELRARDVSELHQLLAKGEIDLFVAETKVTQFDQRDDLE------------IINYCNS- 167 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRL------INRTLTRHSELSFSTFF------VSS 229 +F +P PL+ +N Y RL + R T+ E F F S Sbjct: 168 ---VGVF-CCRPGHPLVR-EKNLYTPRLKDFPLSLPRATTKEVEDLFGDLFDIERPAFSG 222 Query: 230 M--SELLKQVAL---DGCGIAWLPEYAIQQEIRSGKLVVLN-RDELVIPIQAYA-YRMNT 282 + EL ++L + I LP+ I +E+++G LV+L+ +D I + A Y + Sbjct: 223 LLRFELFNSISLPLYNTNMICLLPKLVIDEELKAGSLVLLDVKDMPHINVDFGAVYLKSK 282 Query: 283 RMNPVAERF 291 +NP A+ F Sbjct: 283 NLNPAAKEF 291 >UniRef50_A0Y7Z6 Probable transcriptional regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7Z6_9GAMM Length = 297 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 3/161 (1%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+ K L F+ + + +F++A+ +SQPA S I LE +G LFNR +QL+ Sbjct: 2 NVSIKQLRGFIAIAETGSFAEASERLYISQPALSIAIGKLEDTVGGLLFNRSTRSVQLTP 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPL 126 +G F + L+ +L + K+ +AA S + LP+I++ Q P Sbjct: 62 EGLEFLPIAQRLIADWSEAFDDLNRLFSLKRGKLTVAAMPSFASTRLPAIVAEYQQQFPN 121 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHI 167 T A++ I +++A+D ++ G++D +F ++L F+ + Sbjct: 122 ITIAVQDIVMEQAIDAVQTGRADLGITFEPDNLQGQQFESL 162 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 29/266 (10%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F ++ + R+FS+AA + ++SQPA SR +R LE+ +G+ L R+ ++L+E G + Sbjct: 6 LRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEAGAELY 65 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAID 135 R + +S +A+LRG + + I A+ ++ LP +I++ F AID Sbjct: 66 QHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAE----FLRQFPAID 121 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHF 195 V + Q + D +E + R+ E +F H + L LA Sbjct: 122 VRIISENTELIQRRLLAYELDIAFIEGSVEDSRVEE--VF------WHEDELVILAHSDH 173 Query: 196 PLLNYS--------------RNSYMG-RLINRTLTRHSELSFS-TFFVSSMSELLKQVAL 239 PLLN R G R + L + + + T V L++ VA Sbjct: 174 PLLNRKSLKASDLDAERWVLREQGSGTRSVTLALLKQAGVKVDRTIEVGGNGALVQSVA- 232 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLN 265 G G+A + A ++ + GK+ VLN Sbjct: 233 AGLGLAMVSSVAAREHLSVGKVNVLN 258 >UniRef50_D0J2L9 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=D0J2L9_COMTE Length = 325 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 39/274 (14%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 +I + + F + +C + +AA +V+ A +R++ LE IG LF R + L+L+ Sbjct: 2 HIHARSIRYFDMIRRCGSIREAARHLHVASSAVNRQLLQLEDEIGSPLFERLSSGLRLTA 61 Query: 70 QGKIFHSQIRHLLQ---QLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP-- 124 G++F + +LQ +L + L LRG + + +AA L+ L+P++++QM Sbjct: 62 AGEVFSRHVITVLQDEHRLSTELELLRG---VRRGSVSVAAVEGLNADLMPAVLTQMHRR 118 Query: 125 -PLFTWAIEAIDVDEAVDKLREGQSDCIFSF----HDE-----------DLLEAPFDHIR 168 P + +A + +G +D F HD + P I Sbjct: 119 YPTIQIHVRTCGSQQAAQAVIQGDADVGIGFSVKRHDNLRQCTMGRFALGAIVPPKHPIA 178 Query: 169 LFESQLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVS 228 E F CA+ FPL+ + M L+ L H + + Sbjct: 179 QLERVDFAQCAA--------------FPLILPTPELSMHDLLQPLLAHHKR-ALQVLLET 223 Query: 229 SMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLV 262 S EL K +A G GI + +++E+R G+LV Sbjct: 224 SSIELAKSLAERGVGIFFQSRLGLERELREGRLV 257 >UniRef50_B6WUU7 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WUU7_9DELT Length = 302 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 18/261 (6%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F + +CRNFS+AA SQPA SR + ALE+ +G LF R ++L+ +G++F++ + Sbjct: 11 FYQVARCRNFSRAAAMLFTSQPAVSRSMAALERELGCRLFIRNRRGVELTPEGRMFYAHV 70 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHS-LSLGLLPSI--ISQMPPLFTWAIEAID 135 +Q EL I + A+ + L LLP + + P + Sbjct: 71 EAGCEQFRRGREELEQAVGLQSGSIALGASETALRHWLLPRLDRFHALYPGVRLRLFGGT 130 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIR-LFESQLFPVCASDEHGEALFNLAQPH 194 +A+D+L+ G D + P R L E++L P+ A L Sbjct: 131 SRQAIDELKSGAIDFAVA-------AVPGGGFRALKETRLCPLRDVFVASSAFGQLRGRD 183 Query: 195 FPLLNYSRNSYM----GRLIN---RTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 PL R+ ++ G L ++ + + F+ + L+ +A G GI +L Sbjct: 184 VPLDEVMRHPFICHKQGSLTFEFLESMCKARGVDFAPAMEPDTTGLVLDLARHGLGIGFL 243 Query: 248 PEYAIQQEIRSGKLVVLNRDE 268 PE A ++ + +G++ L E Sbjct: 244 PEVAAREALAAGEVFALRLAE 264 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 143/299 (47%), Gaps = 21/299 (7%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 E + + FL + + NF++AA +VSQ A + +I+ LE+A+GV+LF+R + L++ G Sbjct: 4 ELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALTDAG 63 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFT 128 + + ++ ++ E+ ++ R + + + +A S++ G+L + +S+ P Sbjct: 64 REVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHPGIM 123 Query: 129 WAIEAIDVDEAVDKLREGQSD---CIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH-- 183 I + D+ ++K+++ + D D++L P LF +LF ++H Sbjct: 124 IHIHDVVADQVIEKVKKEEVDFGVATVMHADKELTLMP-----LFTDRLFAFL-PEQHPL 177 Query: 184 -GEALFNLAQ-PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 A +L Q +PL+ +R + + ++++ L H + + + + MS L V G Sbjct: 178 SSRASVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLVR-AG 236 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLN--RDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 GI LPE A + LV L R +L PI R +P ++ + LR++ Sbjct: 237 FGIGILPEDAGTMG-SAQNLVALPIVRPQLTRPIHVL-MRKGRSASPAVQQMLQILRDI 293 >UniRef50_A6VX83 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VX83_MARMS Length = 298 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 38/269 (14%) Query: 18 DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQ 77 +FL + + +FS+AA N+S+ S+ I LE+ +GV+L R L LS G+ F+ Sbjct: 11 EFLAVVEAHSFSKAAEQLNISRARVSQIISRLEKDLGVQLLYRSTRSLSLSPAGETFYQL 70 Query: 78 IRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVD 137 R + QLE + + +I+I + LF I A + Sbjct: 71 ARQGVDQLEHAVLSAQNAHSSIGGQIRINSVGG---------------LFGEEILAPILI 115 Query: 138 EAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL-----FNLAQ 192 +++ + + + FS EDL+E+ +D + ++ + S+ G L + +A Sbjct: 116 RFMNENPKVEIELSFSSTREDLIESQYDLV----VRMGTLSNSNLIGRKLTSYTNYLVAN 171 Query: 193 PHF----PLLNYSRNSYMGRLINRTLTRHS----------ELSFSTFFVSSMSELLKQVA 238 P + P LN ++ LIN ++ R S EL S ++K Sbjct: 172 PTYFDSMPKLNSPKDLLDHTLINGSVKRWSFTHISSKEKYELPVQGKLKCSNGHVVKLAT 231 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRD 267 L+G GI+ P Y ++Q+I+SG+L+VL D Sbjct: 232 LEGTGISRQPSYYVKQDIQSGRLIVLLPD 260 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 19/283 (6%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F TL + ++ ++AA S +++QPA SR I LE +GV LF+RQ + L++ G IF ++ Sbjct: 9 FQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQYGHIFLRRV 68 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLFTWAIEAID 135 + ++++ E++ Q + + H+L L+P +I Q P ++ ++ Sbjct: 69 QAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNISFQLKQNH 128 Query: 136 VDEAVDKLREGQSD-CIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE-----HGEALFN 189 +++L+ G D C+ + E P I+L+ +LF +D L Sbjct: 129 SYWLLERLKSGDLDLCLLASIKP---ENPIQWIKLWSEELFVFVPNDHPLASRESITLNE 185 Query: 190 LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPE 249 +A F LL + Y R+ L + + + F + G GI+ LP+ Sbjct: 186 IAGERFILL---KKGYALRMTVDELFEKANIQPNIMFEGEEATTAAGFVAAGLGISILPD 242 Query: 250 YAIQQEIRSGKL-VVLNRDELVIPIQAYAYRMNTRMNPVAERF 291 + + K+ V + VI I A+ ++PVAE F Sbjct: 243 LKGLDQSKITKIRVSWPECQRVIGI---AWIKGRFLSPVAETF 282 >UniRef50_Q12CJ2 Transcriptional regulator, LysR family n=22 Tax=cellular organisms RepID=Q12CJ2_POLSJ Length = 310 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 24/271 (8%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 + H ET Y F + +C + ++A+ +V+ A SR+I LEQA+G LF R + Sbjct: 10 VRHLQETALRY-FFEVARCGSLTEASERLHVATSAISRQIAGLEQALGTALFERHPRGMV 68 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL 126 L+ G+I + R E + E+ K++IAA+ + + LP +I Sbjct: 69 LNAAGEILATHARRASLDAERAIHEILALQGLRSGKVRIAASEAFANEFLPPLIIA---- 124 Query: 127 FTWAIEAIDVDEAVD-------KLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCA 179 F A E I + V+ ++R+G +D F P I++ Q PV A Sbjct: 125 FRAANEGIVFELNVEPPAQVSVRVRDGDADIGLRFS-----RVPDKEIKVEYRQPAPVLA 179 Query: 180 SDEHGEAL-----FNLAQ-PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSEL 233 H L LAQ +P++ + ++ + ++I+ +R L S +SM+ Sbjct: 180 LMRHDHPLAQSRSVTLAQMSAYPMVLPAPDTAVRQMIDMECSRQQLLMESVLTSNSMTT- 238 Query: 234 LKQVALDGCGIAWLPEYAIQQEIRSGKLVVL 264 + G GI + E +++ + +G LVV+ Sbjct: 239 QHNFVVHGGGITFCGEVSVRHLVAAGTLVVI 269 >UniRef50_C3LW21 Transcriptional regulator, LysR family n=49 Tax=Proteobacteria RepID=C3LW21_VIBCM Length = 321 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 20/288 (6%) Query: 15 WLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIF 74 WL F TL +F++ A ++QP S+ IR LE+A L +R +L++QG++ Sbjct: 26 WLQTFKTLVDTGHFTKTAEKLFMTQPGVSQHIRKLEEACQHPLIHRINKSFELTDQGRMV 85 Query: 75 HSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS--QMPPLFTWAIE 132 + L + L ++ +A R +IA + SLSL + P +++ Q P + +E Sbjct: 86 YEYATQLAKNERRLLEQIHETEPFAGR-YRIACSGSLSLVIYPPLLALQQQHPKLSIELE 144 Query: 133 AIDVDEAVDKLREGQSDCIF--------SFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 A + ++EG D F E L E P + + P D+ Sbjct: 145 AAPNHTILKAIKEGDVDVGIVTSQPSQGVFESEVLGEEPLYLVLPHDHPTEP----DQLA 200 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFS-TFFVSSMSELLKQVALDGCG 243 + L L P +++ + Y+ + N TLT + SF + +V+ + ++L VA G G Sbjct: 201 DHLLQLGLIGHPDIDHYLSLYLAKSTNPTLTVLNSESFPRSGYVNQIQQILLPVA-KGLG 259 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERF 291 LP+ A++ ++ V E P+ Y + R + +RF Sbjct: 260 FTVLPKSAVENFPLREQISVF---ENPAPVTETLYLVKKRQRDLPQRF 304 >UniRef50_A6GL91 Transcriptional regulator, LysR family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GL91_9BURK Length = 301 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/292 (26%), Positives = 130/292 (44%), Gaps = 21/292 (7%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F L + + + AA++ +V+ PA SRR+ ALE+ +GV L +R + LS +G+ + ++ Sbjct: 10 FSELVRHESLASAAMAFDVTPPAVSRRLAALEKRLGVRLLHRSTRRIGLSAEGERYLAEG 69 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAI--DV 136 ++L+Q++ A LR G D + +++ A+ + +++S F A+E I Sbjct: 70 ANILRQIDVLEATLRAGQDTPRGLLRVNASLGFGRKHVANVVSAYHAEFP-AVEVILELT 128 Query: 137 DEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFP----VCASDEHGEALFNLAQ 192 D +D L EG D F + P D RL +L +CA+ + A L Sbjct: 129 DHPID-LIEGGFDLSVRFGE------PPDQ-RLIAQKLASNRRILCAAPSYLAATGELNT 180 Query: 193 P-----HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 P H L+ N R + + + S+ ++ Q AL G G+ Sbjct: 181 PGDLTRHDCLVIRQENHTFNNWQLRNGKQETTVKVHGPVSSNDGDVSVQWALQGKGVLLR 240 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAER-FWRELREL 298 E+ IQQE+++G LV + D P +A P R F R RE+ Sbjct: 241 SEWDIQQELKTGVLVRVLPDWAGAPADIFAVCPYANPMPAKTREFIRVTREV 292 >UniRef50_Q6LKX3 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LKX3_PHOPR Length = 297 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 30/276 (10%) Query: 27 NFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLE 86 +F+ A NV+Q + S++I LE+ +G L R ++L+ QG + + +++++E Sbjct: 20 SFTAVADELNVTQGSISKKIAWLERDVGFSLLYRSSRRVELTAQGSSYLTYCEQMIEEME 79 Query: 87 SNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPPLFTWA---------IEA 133 A L+G D ++ ++ +++ LL I +Q P L IE+ Sbjct: 80 LTEAALKGELDEVVGELTLSVPSAMATRLLAKPIGMFMTQNPKLVINVSVNDRVVNLIES 139 Query: 134 -IDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD-EHGEAL-FNL 190 ID+ +L + F FH++ + A D+++ PV ASD E E L ++L Sbjct: 140 GIDIAIRASELADSAYKARFLFHNQAVYFASPDYLK---QHARPVTASDLEQHECLTYSL 196 Query: 191 AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEY 250 A P L ++S + + + + F S +E+L +AL G G+ LP + Sbjct: 197 ASPSDIWLVKQKDSLVQK-----------VKVNEVFKSDSAEMLLAMALSGHGVGVLPSW 245 Query: 251 AIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP 286 ++Q + + +LV L D + YA + P Sbjct: 246 MVEQCLDNNQLVQLLEDYTATSLPMYAVYKSGEYQP 281 >UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12AP3_POLSJ Length = 303 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 3/147 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ L +C NF++AA +++Q S +IR LE+ IG LF R + ++E+ Sbjct: 1 MELRHLRYFVALAECLNFTRAAERVHITQSTLSHQIRQLEEEIGELLFERVGKRVLITER 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F S L++++ +A L+ + K++I + H+ + G +P I+ + P Sbjct: 61 GELFLSYAAKALKEVDQGVAALKESARGLTGKLRIGSTHTFNQGFIPECIATLLVRHPTV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSF 154 A D+ ++L G D S+ Sbjct: 121 KVAASEFTADDIGERLASGALDLGISY 147 >UniRef50_C3WA71 LysR family transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WA71_FUSMR Length = 296 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 127/260 (48%), Gaps = 22/260 (8%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+ L + RN+++ A + +++QPA S+ I+ LE+ G +LFN L ++EQG+ + Sbjct: 9 FIELCRTRNYTKTAENLHMTQPAVSQHIKYLEEFYGCKLFNYNKKVLTITEQGEALY--- 65 Query: 79 RHLLQQLESNLAELR---GGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTWAIE 132 ++LL + S+ ++R D +++ + A ++ ++P IIS++ P + Sbjct: 66 KYLLT-MSSDANKIREEIKNIDISKKNLHFGATFTIGEFIIPKIISEISSKYPEINISFI 124 Query: 133 AIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE----HGEALF 188 D E +++L++G D F+F + + +++ + + +CA++ Sbjct: 125 IRDTSELLEELKKGNID--FAFIEGFFEKTEYENYLFSKERFVGICAANNPIATEITKFD 182 Query: 189 NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSE---LLKQVALDGCGIA 245 ++ + L N R I + + LS + F E ++K++ + GI+ Sbjct: 183 DIVKERIIL---RENGSGTRDIFEKILYDNNLSLNDFNKKYEIENINIIKELVKENKGIS 239 Query: 246 WLPEYAIQQEIRSGKLVVLN 265 ++ E A+++EI KL ++N Sbjct: 240 FIYERAVEKEILMRKLAIIN 259 >UniRef50_B9Y3A3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A3_9FIRM Length = 301 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 31/274 (11%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L FL L K N+++ A ++SQPA S+ IR LEQ ++LF LQL+E G+ F+ Sbjct: 6 LKTFLLLSKTLNYTKTAQQLHMSQPAVSQHIRYLEQTYNIKLFEYYNRRLQLTEMGQQFY 65 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLFTWAIE 132 Q+ L Q + + LR + +R ++ + +LP +I + P + Sbjct: 66 QQVLALEVQSQDIIERLRQEQE-NRRLLRFDCTFTFGEYILPPLICRWMKENPNTELCMR 124 Query: 133 AIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQ 192 ++ L +G+ D F+ L+E FD ++ES+L + H + + Sbjct: 125 IAGTTACLEALDQGEID--FA-----LVEGFFDKA-VYESRLIKMT----HMGLVVPVGH 172 Query: 193 P-------------HFPLLNYSRNSYMGRLINRTLTRH--SELSFSTFFVSSMSELLKQV 237 P +PL+ + S M ++ L H S SF+ ++K + Sbjct: 173 PLTQKKDVMLNDLIDYPLVVRQKESRMRGILPTGLAEHNLSYESFAGLVQCGSMNVMKTL 232 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVI 271 +GCGI +L I E+ G LV + ++ V+ Sbjct: 233 IKNGCGIGFLHADIIHPELLEGTLVEIPVNDFVL 266 >UniRef50_Q0B7J0 Transcriptional regulator, LysR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B7J0_BURCM Length = 298 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 3/151 (1%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F L +C NF+QAA +VSQ S I+ LE + VELF+R + L+ Sbjct: 1 MELRHLRSFNVLAECANFTQAAKQLHVSQSTLSHTIKQLEDELKVELFDRVGKRVTLNRD 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F + L +L+S + LR +++I + ++ LLP +S+ P Sbjct: 61 GKQFLGTVARTLGELDSGIVSLRNCISELSGELRIGTTSTFNVRLLPGCVSEFLTQNPTV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED 158 I + +++R GQ D + D Sbjct: 121 HVTIAELPGKSIEERVRNGQLDVGICYTPSD 151 >UniRef50_A6BDD9 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDD9_9FIRM Length = 313 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 71/120 (59%), Gaps = 15/120 (12%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 K++Y+ + K R+F++AA + +SQP+ S RI+ +E+ IG LF+R TPLQL+E GK+ Sbjct: 6 KYVYE---VYKERSFTKAAQNLYISQPSLSARIKKIEEIIGEPLFDRSTTPLQLTEVGKV 62 Query: 74 F------HSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 + +QI ++ ++LA L+ G+ + + A+ + ++PS+I+Q F Sbjct: 63 YIEAAEEITQIEQRVENYINDLAGLKTGN------LAVGASTLFAAYVVPSLITQFNQKF 116 >UniRef50_A3CZ37 Transcriptional regulator, LysR family n=4 Tax=Shewanella baltica RepID=A3CZ37_SHEB5 Length = 337 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 29/265 (10%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 K + F + + + S AA N+S A S+++ LE +G+ LF+R L L+E G + Sbjct: 7 KGMIVFAAIAEKGSMSAAAQQLNLSSSAVSQQVTKLEMDMGISLFHRNTRNLTLTEAGSL 66 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPS----IISQMPPLFTW 129 F+ R ++ +ES +L ++KIAA GLL +++ P + Sbjct: 67 FYENCRKVIAIVESTEQKLNNLKGIPSGELKIAAPIGFGGGLLSEPFNYLLAAHPQI--- 123 Query: 130 AIEAIDVDEAVDKLREG--QSDCIFSFHDEDLLEAPFDHIRLF---ESQLFPVCASDEHG 184 ++ + D +D + EG + CI D +L+ R+ P+ +H Sbjct: 124 SLNLLLQDGPIDIVNEGIDLAICIGPLSDSNLIARHLADWRMLLCASPDYLPMHKIFKHP 183 Query: 185 EALFNLAQPHFPLLN-----YSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 L + + P N + RN L ++ +T V++M L+ Q+ L Sbjct: 184 AELAAFNRINHPCANSETLTHVRNKECFELTSQRIT-----------VNNMQALI-QLTL 231 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVL 264 DG G A LPE + + + SG+LV L Sbjct: 232 DGLGFAALPEPEVHKYLESGQLVTL 256 >UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7ZAS3_BACA2 Length = 296 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 131/287 (45%), Gaps = 27/287 (9%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F T+ + ++ +QAA ++SQPA SR I LE +GV+LF+R+ + L+ GK+F ++ Sbjct: 9 FQTVAQVQHITQAAKQLSISQPALSRSISKLEDELGVQLFDRKGRNIYLNRYGKMFLHRV 68 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLFTWAIEAID 135 ++Q+E E+ I ++ SL + ++P +IS M P + + Sbjct: 69 EQSIRQIEIGKQEVWNEIHPNSGTILLSFLPSLGMSMVPDVISSFQHMYPHVNFQLTQAS 128 Query: 136 VDEAVDKLREGQSD-CIFSFHDE--DLLEAPF--DHIRLFESQLFPVCASDEHGEALFNL 190 + +++L + D + S DE D++ P + + L S P+ + DE + Sbjct: 129 NQQIIEQLTSREVDIALTSLRDENDDVICQPLLTEELYLAVSAEHPLASYDEID---LKM 185 Query: 191 AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC--GIAWLP 248 A+ H P +++ + + +I + FS V +++ L G G++ +P Sbjct: 186 AE-HEPFISFKDTNVLHGMIKELCEK---AGFSPDVVFEGEDIVTASGLVGAKLGVSLIP 241 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPI----QAYAYRMNTRMNPVAERF 291 + + + + L V N PI A+R + ++P AE F Sbjct: 242 DLHVFDKTKVKLLSVTN------PICEREIGLAWRKDGYLSPAAENF 282 >UniRef50_Q0EZZ2 Transcriptional regulator n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZZ2_9PROT Length = 293 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/284 (23%), Positives = 135/284 (47%), Gaps = 20/284 (7%) Query: 27 NFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLE 86 F AA + SQ A S ++ LEQ +G+ LF+R+ L+ +G + + + R +L + E Sbjct: 17 GFHAAAEALYRSQSAISIAVKNLEQELGLSLFDRKGYRPVLTPEGHVLYGKARSILSRSE 76 Query: 87 --SNLAELRGGSDYAQRKIKIAAAHSLSLGL-LPSIISQMPPLFTWAIEAIDVDEAVDKL 143 S++A + + I ++A + L + ISQ P +++ ++ +++L Sbjct: 77 DMSSIASHFARGEEPEISIALSAIAPVEQVLDVIKQISQSAPATRMSLQVENMGGTLERL 136 Query: 144 REGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLNYSRN 203 +E D F+ ++ + + +RL +Q+ PV + D F LA +P + S Sbjct: 137 QE--KDVDFAIAEQFVPVEYAEQVRLTSTQMIPVISPD------FPLAT-RYPAITLSDL 187 Query: 204 SYMGRLINRTLTRHSE------LSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIR 257 +++ R +R+ L + ++ + ++ K++ L G G +P + + +E+ Sbjct: 188 EAYVQVVVRDTSRNQPKRSAGVLEGAPQWLVNDFDMKKRMILSGAGWGRMPRHRVAEELA 247 Query: 258 SGKLVVLNRDEL-VIPIQAYAYRMNTR-MNPVAERFWRELRELE 299 G+L+ L+ L + I Y +R M PV ER W+ L++ + Sbjct: 248 DGRLLALSGKGLDAVKIDMYLFRRTGEPMGPVGERLWQLLQQCQ 291 >UniRef50_UPI000174499E transcriptional regulatory protein, LysR family n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174499E Length = 302 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 12/261 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++++ L F L + +F+QA + +++Q A S IRALE+ +G LF+RQ + L+ Sbjct: 6 LDSRQLRAFTVLAREGSFTQAGRALHLTQSAISHAIRALEEDLGCMLFHRQGKRVLLTHH 65 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ + +Q+ A L + +I+I + + S +LP+++ + PL+ Sbjct: 66 GRELLRHAEEIQRQMALARASLGALDQNPRGQIRIGSTPAASQFILPTVLREFKDSFPLY 125 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLF----PVCASDEH 183 + +I + + + +L +G D D+ A D LFE +L P+ + Sbjct: 126 SISIVPGETPDTLQRLEQGVLDLAVCLRPRDV--ARVDCRPLFEDELIFLASPLHPWAQQ 183 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 +LA + + SRNS +I + + +F +E +K++ G G Sbjct: 184 HPKTKDLAGETY--IISSRNSSTFEMIGEYFLKLG-VRPKSFIELGNTEAIKELVKLGLG 240 Query: 244 IAWLPEYAIQQEIRSGKLVVL 264 +A + + EI+SG+LV L Sbjct: 241 VAMVAAWTAPAEIKSGELVSL 261 >UniRef50_C4ZFB9 Transcriptional regulator GltC n=13 Tax=Firmicutes RepID=C4ZFB9_EUBR3 Length = 334 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 5/163 (3%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+E + L FLT+ K ++F++AA +++QP SR++ A E+ +GV LF R + L+E Sbjct: 42 NMELRLLRYFLTVAKEQSFTKAAEQLHITQPTLSRQMAAFEEELGVTLFIRSGKKISLTE 101 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PL 126 +G + + +L E L EL+G D + I I ++ L I PL Sbjct: 102 EGILLKRRALEILNLEEKTLEELKGKEDVVEGNITIGCGEFAAVETLAKICKTYKEKYPL 161 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRL 169 + D + + +G D D D+IR+ Sbjct: 162 VQIVLHTATADAVYEMMNKGLVDIALFMEPVD--TEGLDYIRI 202 >UniRef50_B6G0F8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0F8_9CLOT Length = 286 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 13/158 (8%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L+ F ++ + +NF++AA +++QPA S I+ LE+ +G ELF R + L+ QG+IF+ Sbjct: 6 LHYFESVARNKNFTKAAKECHIAQPAISHHIQNLEEELGTELFIRNSRNVSLTPQGEIFY 65 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAID 135 ++ +L+ E + + + S Y++ K+ I SL +L +S + + + Sbjct: 66 KEVVKILKAYEDAVMKTKFSSMYSKGKLTIGMYGFSSLNILDPAVSALKSKYP------N 119 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQ 173 VD D+ C +++ + LL +D I + SQ Sbjct: 120 VDIIFDR-------CQDAYYADYLLSGKYDIILAYVSQ 150 >UniRef50_A3IBB5 Transcriptional regulator (LysR family) protein n=1 Tax=Bacillus sp. B14905 RepID=A3IBB5_9BACI Length = 143 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 3/119 (2%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+E KWL F+ + NF AA ++SQP+ + I+ LE+ + V+LF R+ +QL+E Sbjct: 13 NMEYKWLQSFIVAAQTCNFRTAAQQLHLSQPSITVHIQQLEEFLHVQLFKRERNRVQLTE 72 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 GK+F + + ++ Q E ++ +R S K+ IA + +LP ++ Q PP Sbjct: 73 AGKLFQIEAQQMVLQWEQSIERIRLVSKGIHEKVIIAMTPLMVETILPHVLYQFINDPP 131 >UniRef50_B7HRA4 Transcriptional regulator, LysR family n=70 Tax=Bacillus cereus group RepID=B7HRA4_BACC7 Length = 290 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 20/300 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + F + K +FS+AA + +Q + ++ALE + + LF+R + L++ Sbjct: 1 MEMRHVKTFCAIVKYGSFSKAAHALGYAQSTVTAHMKALENDLHIPLFDRLGKKVLLTKA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 G FH LL E E+ +D + + I + SL++ LP ++ Q P Sbjct: 61 GHQFHPYALELLAIYE-KAQEIPQNTDQLEGTLSITSNESLAVYRLPQLLRTYKQKNPKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIF----SFHDEDLLEAPFDHIRLFESQLFP-VCASDE 182 +E ++A+ KLREG++D +F S D + F + F L P C Sbjct: 120 NIVLETNTNEQALQKLREGETDVVFIIGESIEHNDFITRTFSN-ETFGWILPPHYCI--- 175 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGR-LINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 H + L F ++ S R +++R L + + TF S++ E++KQ + Sbjct: 176 HSNPFYLLKDTQFI---FTEQSCGYRPMVDRFLRQSGNIPAKTFETSNV-EVIKQSVMCE 231 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELRELEI 300 GI+ LP +Q+ + +L E IQ++ +R ++PV + F L+ +++ Sbjct: 232 LGISILPYIVVQESCQKEQL-CFQPIETPTVIQSHVIYHKSRWISPVVQSFLSLLKVMKV 290 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 141/300 (47%), Gaps = 38/300 (12%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIF--HS 76 F T+ + +F++AA V+QPA ++ I+ LE +G LF+R+ + L+ G + H+ Sbjct: 9 FYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTAGNVLLRHA 68 Query: 77 Q-IRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF-------- 127 + I + +Q+E +L EL+G ++++ A+ +++ ++P+++++ F Sbjct: 69 ETIMGVYRQIEFDLNELKGKPG---GRLRLGASSTIAQYVIPAVLARFGEQFPDVTLSLL 125 Query: 128 ---TWAIEAIDVDEAVD-KLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE- 182 T IE + + +D L EG++ H D+ PF + +L VC +D Sbjct: 126 SGNTEQIEQALLHDEIDLGLVEGRT------HHSDVRYTPF-----VKDELVLVCRADHP 174 Query: 183 -HGEALFNLAQ-PHFPLLNYSRNSYMGRLINRTLT----RHSELSFSTFFVSSMSELLKQ 236 G L + PL+ S ++ L R +EL + S +E +K Sbjct: 175 LAGRDEITLDELKTVPLVLREPGSGSREVVEHALRGAGLRLAELQQAMQLGS--TEGIKT 232 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 G+A++ +A+ E++SG L VL+ +L I YA ++ +A+ F R +R Sbjct: 233 YLSSSSGMAFVSIFAVPNELKSGTLRVLDVADLTIERDFYAIQLQGMSEGLADTFMRFVR 292 >UniRef50_P96725 Uncharacterized HTH-type transcriptional regulator ywqM n=3 Tax=Bacillus RepID=YWQM_BACSU Length = 293 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/284 (27%), Positives = 122/284 (42%), Gaps = 55/284 (19%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L F+T + NF+ A N +Q + + +I++LE+ IG LF R L L+E Sbjct: 1 MELKQLITFITAAEHVNFTLTAKMLNYAQSSVTSQIKSLEEEIGTPLFERLGKRLILTEA 60 Query: 71 GKIFHSQIRHLL-----QQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP 125 GK F S + ++ ++ +N G+ +KI A S LP II + Sbjct: 61 GKTFKSYAQKIIALTEEAKMATNQVRETTGT------LKIGATESQCTYRLPPIIKEFKQ 114 Query: 126 LFTWA----IEAIDVDEAVDKLREGQSDCIF---------SFHDEDLLEAPFDHIRL--- 169 F I ++A ++L +GQ D F + H E L++ D I++ Sbjct: 115 AFPQVKLIFKPYISNEQAKEQLLQGQLDITFILDVNRMEDALHVESLIQ---DEIKMVAA 171 Query: 170 ----FESQLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTF 225 F + L PV D E L LL SY RTL ++ L S Sbjct: 172 NDHPFPADL-PVTLKDLQNETL---------LLTEDGCSY------RTLFENN-LHDSGI 214 Query: 226 FVSSMS----ELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLN 265 + + + E +KQ + G GI LPE ++ +I +G++ LN Sbjct: 215 YPNKLEFVSIEAIKQCVMAGLGIGILPEMTVKDDIAAGRMKELN 258 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 75/296 (25%), Positives = 132/296 (44%), Gaps = 25/296 (8%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N E L F + + +F +AA + ++SQPA +RRI+ LEQ+IG L +R + + Sbjct: 4 NCEILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVAPTA 63 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PL 126 G+ +R +L++ + +L ++ + I +A + + LP++I P Sbjct: 64 TGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTFGRDYPH 123 Query: 127 FTWAIEAIDVDEAVDKLREGQ----------SDCIFSFHDEDLLEAPFDHIRLFESQLFP 176 I + +E + + G+ SD SF E L++ PF L + P Sbjct: 124 IRLRIRDLTANEGLQAVARGEVEFGINLMGNSDPDLSF--EPLIDDPF---VLAMRKDHP 178 Query: 177 VCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFF-VSSMSELLK 235 + A D E +N + H PL+ R+S L++ L R + L + F+ V+ ++ L Sbjct: 179 LAAFD---EIHWNQLEGH-PLVVVDRSSGNRTLLDAALAR-ANLRLNWFYEVTHLNTSLG 233 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERF 291 V G GI+ LP A QE + + +V R + ++P A+RF Sbjct: 234 LVEA-GLGISVLPRLATPQEEHPFLVTRPIVNPVVTRTIGIVRRRSATLSPAADRF 288 >UniRef50_D2YDB3 HTH-type transcriptional activator aaeR n=2 Tax=Vibrio mimicus RepID=D2YDB3_VIBMI Length = 309 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 120/300 (40%), Gaps = 60/300 (20%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 IET L F L + NF++AA S N+SQP SR+I LEQAI V LF+R + L+ Sbjct: 5 IET--LRMFSVLAETLNFTEAAESLNISQPTLSRKISQLEQAINVRLFHRGGNQMHLTPH 62 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G++F +L+ +S L +L + + I I H P+ W Sbjct: 63 GRMFLETSHRILEDFDSTLEKLHDSPENIRGDISIGLLH---------------PMARWL 107 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFP-------------- 176 ++ E K S + + H ++ E P I + S L P Sbjct: 108 SQSF--FEGFLKRHPNVSLSLTTLHPSNMREMPGCDIMI--SPLLPDDLSLVAKRLDRYR 163 Query: 177 --VCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRT--------------LTRHSEL 220 CAS E+ A+F +P P R I T + ++ Sbjct: 164 RIFCASPEY-IAMF--GKPSTP-----DELMFHRCITNTNCPKPESFWPWEDEVGNSGKI 215 Query: 221 SFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YR 279 + S + ++ +A G G+A++P I+Q++ GKLV L + + YA YR Sbjct: 216 NVSGNISTDSVDIATNLACAGLGVAFIPGCQIRQQMAEGKLVDLFDGQYFYDSEVYAIYR 275 >UniRef50_A4EV39 Transcriptional regulator, LysR family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EV39_9RHOB Length = 151 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 4/135 (2%) Query: 161 EAPFDHIRLFESQLFPVCASDEHGEALFNLAQPH---FPLLNYSRNSYMGRLINRTLTRH 217 EA F L +L PV A+ + L+NL + + P L Y S++G ++ T+ R Sbjct: 15 EAAFIRKDLLTDRLIPVAATKQARANLWNLNKQNGSPIPYLAYEPTSFLGTVVENTVERQ 74 Query: 218 SELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA 277 L+ +V + E +K+ L G G AW+P AI+ E+ G LV + D + A Sbjct: 75 L-LNAEEIYVDGLVETIKRRLLKGSGFAWMPATAIETELSEGVLVPIGDDCWRTSLTVSA 133 Query: 278 YRMNTRMNPVAERFW 292 ++P A R W Sbjct: 134 LSNPETLDPTARRLW 148 >UniRef50_B5JK93 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK93_9BACT Length = 293 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 3/145 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + N ++AA +VSQPA SR++R LE+ +G L R + L+E Sbjct: 1 MELRHLRYFIEVALEENVTRAAEKLHVSQPALSRQVRDLEEELGFALLERSAKSVSLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G++F + +L++LE +A R ++ +I + A SL++ +LP I P Sbjct: 61 GRVFLDEASAVLERLEVGVAAARAAAEDGSGEIHVGYAPSLTVKILPPTIRAFQAEYPKV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIF 152 + + +E +D LR G+ D F Sbjct: 121 KVKLYDMSTEEMLDGLRSGKLDFAF 145 >UniRef50_A7IJK5 Transcriptional regulator, LysR family n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IJK5_XANP2 Length = 291 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 17/249 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + FL L NF++AA+ VSQP +R I+ LEQ +G L R +L+ Sbjct: 1 MELNQIRYFLNLADTLNFTEAAMRSGVSQPTLTRAIQRLEQELGGTLVYRDGKDSRLTTL 60 Query: 71 GKIFHSQIRHLLQQLES----NLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL 126 G+ S+ + + + +L +RG + I A +L L + QM P+ Sbjct: 61 GRDIRSEFAAIADREQRVRAISLNRVRGRRETLTLGIVNTIAPALITEFLKHALRQM-PM 119 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 ++ I DE +++L GQ D F D + +F +L A HG + Sbjct: 120 LELVLQPITRDEGMERLLGGQIDGCFC-TDPAAGNTKIATVEMFRERLLLAMA---HGHS 175 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTR-HSELSFSTFFV-----SSMSELLKQVALD 240 L +Q L+ S Y+ RL TR + L+ F+ S +L++Q Sbjct: 176 LA--SQASVSLVELSEQPYLDRLQCEFRTRVQNHLNERAIFMIPRLRSEREDLIQQAVAS 233 Query: 241 GCGIAWLPE 249 G G+ LPE Sbjct: 234 GAGVCMLPE 242 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 83/151 (54%), Gaps = 5/151 (3%) Query: 3 DCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQV 62 D + +ET+ L F+ + + +F +AAV ++SQP S++IR LE+ +GV LF R Sbjct: 5 DTKKLSMRLETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQ 64 Query: 63 TPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII-- 120 ++L+ G++F +Q R+ L +LE + +R + ++ + + ++PS++ Sbjct: 65 RSVKLTYAGQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSVMHA 124 Query: 121 -SQMPPLFTWAI-EAIDVDEAVDKLREGQSD 149 Q PL A+ E++ D+ D +REG+ D Sbjct: 125 FKQRYPLVEVALRESLSGDQYRD-IREGRLD 154 >UniRef50_C9Y5B3 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y5B3_CROTZ Length = 313 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 31/261 (11%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F+ + +F+QAA +S A + + LEQ +GV LFNR + L+ +G Sbjct: 15 LASFVRTAETLSFTQAARVLGISASAVGKNVARLEQKLGVRLFNRSTRSVSLTAEGATLL 74 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIA---AAHSLSLGLLPSIISQMPPLFTWAIE 132 ++ R L+QL AEL +D +++I+ + L + LP+ ++ P + IE Sbjct: 75 ARCRPALEQLREAEAELTSATDTPSGRLRISLPVIGYHLLMPFLPAFAARYPEI---DIE 131 Query: 133 AIDVDEAVDKLREGQSDCIFS--FHDEDLLEAPFDHIRLFESQLFPVCASD----EHGEA 186 D V+ + EG I S D L H R F +CAS EHG Sbjct: 132 LDFSDRLVNLVDEGFDVAIRSGEMADSRLTATTLGHFR------FVLCASPVYLAEHG-- 183 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMS------ELLKQVALD 240 P P + R + L + EL+ T + + E + + A+ Sbjct: 184 -----APQTPDALKKHRCILFRFPSTGLIQPWELTGLTMTGAPSALTVNNIEAMIRAAVA 238 Query: 241 GCGIAWLPEYAIQQEIRSGKL 261 G GI ++P++ + + G+L Sbjct: 239 GMGICYVPDFIVNSLLTRGEL 259 >UniRef50_A8GGJ1 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A8GGJ1_SERP5 Length = 309 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 27/276 (9%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 + + +F+ K +F+ AA +++ A + + LE+ +G LF+R L L+ G+ Sbjct: 11 RGITNFVITAKSSSFTAAAEQLGITKSAVGKSVARLEERLGTRLFHRSTRKLSLTSDGEA 70 Query: 74 FHSQIRHLLQQLES--NLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPL-- 126 + + L+ L+S N R + +I + A+ +L ++P +I M P L Sbjct: 71 YLTSCLSALEILDSAENTLSRRQENPTGTVRIDMPASFGRNL-MMPVLIEMMTRYPALRL 129 Query: 127 -FTWAIEAID-VDEAVD-KLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS--- 180 T+ ID V+E VD LR G+ D L A R Q +CAS Sbjct: 130 ALTFNDRLIDPVEEGVDLVLRLGE------LQSTDELIA-----RRLSRQRLILCASPAY 178 Query: 181 -DEHG-EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 + HG A + H+ ++ Y R + + + + R + +T S + + Q Sbjct: 179 LERHGLPADIEDLKSHYCVMGYRRGAPLAWRLRKAGEREVKFISATAHQISDGDAMIQAC 238 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQ 274 L G GIA PE + I +G L+ L D IP++ Sbjct: 239 LAGVGIAQFPESMVNSHIAAGSLISLMADHAPIPVE 274 >UniRef50_C8WF85 Transcriptional regulator, LysR family n=3 Tax=Zymomonas mobilis RepID=C8WF85_ZYMMN Length = 303 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 23/256 (8%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F + + +F++AA + +S+P S+ + LEQ++G LFNR + L++ G+ Sbjct: 12 FAKVAELGSFARAAEAIQLSKPTVSKAVSRLEQSLGSALFNRNSRHISLTDLGRSLLGHA 71 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSL----GLLPSIISQMPPLFTWAIEAI 134 ++ + E E RGG IKIAA + L +LP ++Q P + +I Sbjct: 72 NKIIAEAEMAETEARGGIQRPSGLIKIAAPTTFGLWHLSPVLPDFLAQYPEIDI----SI 127 Query: 135 DVDEA-VDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD--------EHGE 185 D +A VD + EG + L ++ RL +L V SD +H + Sbjct: 128 DFSDALVDLVGEGYD---IALRIASLADSALRARRLCPVRLLLVATSDYLDRIGRPQHPK 184 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 AL Q F N SR S M RL ++ + LS S+ F + +E G G Sbjct: 185 ALEK--QKSFVYTN-SRASGMIRLRHKESGKEYVLSQSSRFRADNAEAFLPALEAGLGFG 241 Query: 246 WLPEYAIQQEIRSGKL 261 P++ + + ++SGKL Sbjct: 242 IFPDFMVWEGLKSGKL 257 >UniRef50_C8SMW5 Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMW5_9RHIZ Length = 313 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 39/284 (13%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 MD +L T L F+ + S +AV ++V++ LEQ +GV L R Sbjct: 19 MDRLNGLLAFARTAELGSFIAAGRALGISASAVGKSVAR---------LEQELGVRLLQR 69 Query: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAA---AHSLSLGLLP 117 + L+E+G++F ++R +L ++ A L + + +++I+ + L L +L Sbjct: 70 STRRVGLTEEGRLFDERVRRILDDIDDAEAMLSRTRETPRGRLRISTPIVTYHLLLPVLS 129 Query: 118 SIISQMPPLFTWAIEAIDV---DEAVDKLREGQSDCIFS--FHDEDLLEAPFDHIRLFES 172 +++ P + +D+ D VD + EG I S D L+ P R+ Sbjct: 130 EFMARYPEI------ELDIDFNDRVVDVIEEGIDVAIRSGELPDSRLVSRPVAPFRML-- 181 Query: 173 QLFPVCAS----DEHGEALF--NLAQPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTF 225 +CA+ D HG +L + HF + NS GRL++ T S E + Sbjct: 182 ----LCAAPSYLDRHGTPSVPADLIR-HFGINFRFLNS--GRLLDWPFTTGSAEPQIRSM 234 Query: 226 FVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDEL 269 + E LK L G GIA +P++ +++ + KL ++ D + Sbjct: 235 LTCNNMEALKGATLAGLGIACMPDFLVREALHDSKLRIVLDDHV 278 >UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=Q2T4U0_BURTA Length = 299 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 19/267 (7%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI-- 73 L FL + + + + A+ +VSQPA +R IR LE+ +GV LF+R+ + +E G++ Sbjct: 6 LSAFLAVVEAGSVTGASARLHVSQPALTREIRDLEERLGVVLFDRRPRGMSPTEAGRLLA 65 Query: 74 -FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIE 132 + +I L + E+ L E G + +K+AA+ ++ LLP ++ + Sbjct: 66 GYAKRIFALTDEAEAALDEFSG---LVRGNLKLAASRTIGSYLLPPVLDVFCDRYPGVT- 121 Query: 133 AIDVDEAVDKLREG---QSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD-----EHG 184 IDV E +L E + F + FD + L V AS +H Sbjct: 122 -IDVAEMNTELVEAALLTYERQLGFVEGAYDTTAFDSMVFGRDTLLAVAASSHPLARKHR 180 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + ++A +L+ S + H L F+ +E + ++ L G I Sbjct: 181 VGVQDIADCD--VLSREPGSGTRNAVETAFAEHG-LEFAPRLSVGSAEAMNRLLLRGNAI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVI 271 AW+ + I+ E+ +G LV L ++ + Sbjct: 238 AWVSRFTIEAELEAGALVPLRVTDMTV 264 >UniRef50_B2UD39 Transcriptional regulator, LysR family n=6 Tax=Ralstonia RepID=B2UD39_RALPJ Length = 307 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 16/264 (6%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 ++L+ FLT+ +F +AA VSQPA S ++R LEQ +GV LF R L L+ G Sbjct: 7 RYLHSFLTVANEGSFVRAADRLAVSQPALSYQMRQLEQWLGVPLFERSGRKLVLTRAGTS 66 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLL------PSIISQMPPLF 127 + R L+ A L G + + +K+A+ S +L PS S+ P L Sbjct: 67 VRAWCRDAFAGLDELRAALHSG-EMERVSLKLASGSSFGRYVLMPALLTPSPESEAPLLD 125 Query: 128 TWAIEAI--DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DE 182 +E + +E + G++D F + F+H ++ + C++ E Sbjct: 126 DVRLELVFGSDEEVFSHVESGRADLGFVYTPRT--SRLFEHHAVYTEEFVLACSARVLRE 183 Query: 183 HGEALFNLAQPHFPLLNYSR-NSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 H P + Y ++ G R E + S VS + E+ V G Sbjct: 184 HAAPRTLADCAALPFVTYDESDAVYGLWFKALFRRMPETTVSAHHVSDLEEVSTLVE-AG 242 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLN 265 G + LP +A+Q+ + G+L V+ Sbjct: 243 MGWSVLPLHAVQEAVERGRLQVVR 266 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/299 (21%), Positives = 134/299 (44%), Gaps = 19/299 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E L F T+ + ++FS+ + +++QPA S +I+ALE+ +LF+R + L+ Sbjct: 1 MEDHKLKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI---ISQMPPLF 127 G+I + + +L E+ + + +KI A ++ +LP++ + P Sbjct: 61 GEILYKYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD-----E 182 ++ + + ++ L D F E ++ F + +L +C++D + Sbjct: 121 RVSVSIGNAKKILEMLNSSMID--FGIISEMPGKSKFIVDSIISDELCVICSADHPLNNQ 178 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRH----SELSFSTFFVSSMSELLKQVA 238 +L+++ + P + S +I + L H S+L S S+ S +K+ Sbjct: 179 KSVSLYDVVKE--PFVIREEGSSTRVIIEKFLAEHGLSVSDLHISLILGSTGS--IKEAV 234 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWRELR 296 G G++ + ++AI++E+ G L +L E I Y NT ++P E F L+ Sbjct: 235 ERGIGLSIVSKWAIRKEVSCGNLRILKLKEGKITRDFYIILPKNTILSPAVEEFITYLK 293 >UniRef50_C7BI08 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=C7BI08_PHOAA Length = 301 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 27/253 (10%) Query: 27 NFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLE 86 +F AA +S+ A S+ I LE+ + L NR + ++ G+ ++ Q+ ++L +LE Sbjct: 21 SFKAAAQDLGLSKAAVSKNINQLEEYLKSPLINRTTRNMHITANGRNYYHQVCNILDELE 80 Query: 87 SNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ-MPPLFTWAIEAIDVDEAVDKLRE 145 + + S IK++ S+ L L +I Q M + ++E + +D+ +D + Sbjct: 81 NADLSVMETSHTLTGSIKVSIPMSMGLKALNPLICQFMHTHPSISVEVVMIDKYIDLIEH 140 Query: 146 GQSDCI--------FSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPH--- 194 G I S L++ P R+ CAS + EA + P Sbjct: 141 GIDVAIRGGGELSDSSLRSRKLIKVP----RVL-------CASPAYIEASEKILIPENLT 189 Query: 195 -FPLLNYSRNSYMGRLI--NRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYA 251 L YS +S R I N+ + +L T+ V++ LKQ AL G G+ LPE Sbjct: 190 SHNCLVYSLSSSPRRWIFHNQNDVKVVDLKPGTYVVNN-GLALKQAALSGHGVILLPELL 248 Query: 252 IQQEIRSGKLVVL 264 + E+ SGKLV L Sbjct: 249 VTDELLSGKLVRL 261 >UniRef50_C5ENY2 Transcriptional regulator n=5 Tax=Firmicutes RepID=C5ENY2_9FIRM Length = 296 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 11/170 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L FL + + NF++AA +V+QP SR+I LE+ +GVELF R + L+E Sbjct: 1 MELRVLNYFLAVAREENFTRAAQMLHVTQPTLSRQIAQLEEELGVELFTRSNHNIILTES 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G I + + +L E EL G + KI I + + LL IIS PL Sbjct: 61 GMILKHRAQEMLSMAEKTRQELLQGDEELTGKICIGSGEFQATRLLAQIISSFSEKHPLV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV 177 + I + + + D + G D L+ P D IR ++ PV Sbjct: 121 QYEIYSGNAENVHDHIERGLLDI-------GLMAEPID-IRKYDFVSMPV 162 >UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Geobacillus RepID=A4ISN4_GEOTN Length = 305 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 68/113 (60%), Gaps = 8/113 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 I+ K L F+T+ + ++AA +++QP S++++ LE+ +GV LF+R+ ++L+ Sbjct: 2 IDVKQLKYFVTIAEEGQITKAAQKLHIAQPPLSQQLKQLEEKLGVPLFDRKAKKMELTAP 61 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM 123 GK+F+ + + LL QL+ +AE+ ++I+ A +L++G + S S + Sbjct: 62 GKLFYEKAKQLLHQLDDAIAEV--------KEIETGATGTLAVGCVKSCFSYL 106 >UniRef50_A5VE89 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VE89_SPHWW Length = 312 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 28/294 (9%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+ + + +FS+A NV S+ + LE+ I +L R L +SE G+ F+ + Sbjct: 22 FVAVVEAGSFSEAGYRLNVMPSTISKHVSFLEEKIHGQLIVRSTKHLSVSELGRRFYDRC 81 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLS----LGLLPSIISQMPPL---FTWAI 131 +L+++E AE+ Q K++I S + L+PS + + P + F Sbjct: 82 LIILKEVEETEAEMLEYQMEPQGKLRITMGPSFAGYHLPRLIPSFLERYPKISLDFRVTP 141 Query: 132 EAID-VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNL 190 E +D +D ++D S+ LE ++L + VC S + E Sbjct: 142 ELVDLIDHSIDVAVRISSN----------LEPGLIAVKL-APNIRSVCVSPAYVEKFGMP 190 Query: 191 AQP-----HFPLL-NYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 A+P H LL N + ++ RL+ + + + S V + ++ KQ LDG GI Sbjct: 191 AEPRDLESHNCLLTNEASSTAKWRLLQDGV--ENVVHVSGNLVVNHGDIYKQAILDGVGI 248 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAER-FWRELRE 297 L Y + QEI G+L+ L D VI Y R P+ R F LR+ Sbjct: 249 GHLSRYLVYQEINDGRLIELFPDRGVINSFIYVVYPQRRNLPLKTRVFIDHLRD 302 >UniRef50_B8CQS4 Transcriptional regulator, LysR family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQS4_SHEPW Length = 304 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 32/275 (11%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + F+ L + +++S AA ++SQP+ +R I+ +EQ++GV+LF R + L+ Sbjct: 1 MELRHIKHFVALAQSKSYSVAASKLDISQPSLTRSIQKMEQSLGVKLFIRDSRRVSLTYH 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 G + +L + + A+++ S + K+ I S +L I+ S++ P Sbjct: 61 GDLVLKHSDKILNTVCNLEADIKINSGRSNGKLTIGGGTLASSNILNDILHNFSKLHPNV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + D+DE L +G+ D S E + L E + V + + Sbjct: 121 SVELRTRDIDELCSLLSKGEIDLFIS---EIKISG------LSEREELQVISYKKSRGVF 171 Query: 188 FNLAQPHFPLLNYSRNSYMGRL------INRTLTRHSELSFSTFF---VSSMSELLK--- 235 F +P PLLN + Y RL + R T E F F S+ S L K Sbjct: 172 F--CRPGHPLLN-DKYLYTPRLKDFPISLPRATTSDIESLFGDLFDVNRSAFSGLFKFEY 228 Query: 236 -----QVALDGCGIAWLPEYAIQQEIRSGKLVVLN 265 + ++ I +PE I E+ SG+LV+L+ Sbjct: 229 FHSVSKTIVESDMIGLIPEIVIANELASGELVLLD 263 >UniRef50_A8SQI2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SQI2_9FIRM Length = 298 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 3/134 (2%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 FL + + N S+AA ++SQP SR++R LE+ +GVELF R LQL+E G F + Sbjct: 9 FLQIAEYENISKAAEELHISQPPLSRQLRKLEEELGVELFTRDNGRLQLTEAGHFFRERA 68 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLFTWAIEAID 135 + ++ ++ +++ + A KI+I +LS LP ++ ++ P T+ I + Sbjct: 69 QEVISLVDKTRSQMAERYNGAGGKIRIGTIETLSAEKLPKWVAGFHEIYPDVTYQIVNNN 128 Query: 136 VDEAVDKLREGQSD 149 +E + + +G D Sbjct: 129 SEEIIRMVDKGLLD 142 >UniRef50_D2RND2 Transcriptional regulator, LysR family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RND2_ACIFE Length = 309 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 3/148 (2%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 K+L DFLT+ + N + AA +SQPA SR ++ +E+ G+ L R+ + + L++ G+I Sbjct: 5 KYLRDFLTVCETGNITAAAARLGLSQPALSRIVKMVEKEAGMPLLVREASGVYLTQAGEI 64 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA--- 130 + R +L+ + L E+ D +I++ + S LLP I+ Q L+ Sbjct: 65 YARMARTMLESYRNGLREIHDIRDSQSGQIRLGLSRISSETLLPVILEQFRTLYPHVELH 124 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDED 158 + + + LR+G+ D ++ +D Sbjct: 125 LTETLIRQLNPLLRQGKLDLALTYFTDD 152 >UniRef50_Q5LR91 Transcriptional regulator, LysR family n=3 Tax=Rhodobacterales RepID=Q5LR91_SILPO Length = 310 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 29/306 (9%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 +I + L F TL + +AA S +SQP+ S +I ALE+A+G L R+ + L L+ Sbjct: 4 DITLRQLSYFSTLVAAGQYRRAARSLGISQPSLSLQIAALEKAVGARLLERRRSGLILTP 63 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PL 126 +G+ + +L+++E+ D +++ + ++ LLP ++ Q+ P Sbjct: 64 EGRDVSEMVARILREVEALTLYASPMRDNMTGTLRLGSTPTIGPYLLPRVLRQLHRQYPR 123 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFS---FHDEDLLEAPFDHIRLFESQLFP------- 176 AI + V+ L G+ D I + +D+ AP L E + P Sbjct: 124 LKLAIRDGAPRDLVEDLAAGRYDLILTHLPVSRDDIRVAPLFREPL-ELAVDPAHRLAGA 182 Query: 177 --VCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELL 234 V +D GE + +L+ Y+ + + + L + ST F + + L Sbjct: 183 TQVRQADLAGETMLSLSS------GYALHGQV-----QALCESAGARLSTEFEGTSLDAL 231 Query: 235 KQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRD--ELVIPIQAYAYRMNTRMNPVAERFW 292 +Q+ G GI LP + E+R+ V+ R + I A+R + P ERF Sbjct: 232 RQMVSLGMGITLLPALYVASEVRTRGADVVTRPLRPAIHRIVGLAWRTASGTPPAIERFT 291 Query: 293 RELREL 298 R++ Sbjct: 292 ELTRQV 297 >UniRef50_Q0BC55 Transcriptional regulator, LysR family n=9 Tax=Burkholderia cepacia complex RepID=Q0BC55_BURCM Length = 295 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 22/261 (8%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+ + + +F++AA N+S + +R I +E +G L NR L L++ G ++ +QI Sbjct: 10 FIKVAELHSFARAATELNISNSSATRLIMGIEDRLGARLLNRTTRSLSLTDAGHLYLAQI 69 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPPLFTWAIEAI 134 RH++++++ + +KIAA + +L I +Q P + E Sbjct: 70 RHVIEEIDRVEDTIASMHHEPIGSLKIAAPVMFGMHVLAPAIDAFKTQHPAIVP---EVT 126 Query: 135 DVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLA 191 VD VD + EG + L+ P ++ VCA+ + EA Sbjct: 127 IVDRHVDLVSEGFDVGLLLSQRISTNTLVTRPLTRLKRI------VCAAPRYVEAHGAPI 180 Query: 192 QPHFPLLNYSRNSYMGRLINRTLT-RHSELSFSTFFVSSMSE----LLKQVALDGCGIAW 246 PH L ++S ++ L+ H + S S L++ AL G GIA Sbjct: 181 HPH-DLASHSCLTFHADFAGEYLSFDHEPTRVAVRPNKSASSNNIGLIRNWALSGMGIAV 239 Query: 247 LPEYAIQQEIRSGKLVVLNRD 267 LP++ ++ ++ G+L+ L D Sbjct: 240 LPDFLVEADLADGRLLALLPD 260 >UniRef50_C3KLX8 Putative transcriptional regulatory protein, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KLX8_RHISN Length = 308 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 12/259 (4%) Query: 26 RNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQL 85 R+FS+AA N +QPA S+RI A+E+AIG LFNR PL L+ G+ +L+Q Sbjct: 17 RSFSRAAEKLNTTQPAISQRIGAMEEAIGEPLFNRATKPLVLTPVGRTLFGHAELVLRQ- 75 Query: 86 ESNLAELRGGSDYAQR---KIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVD---EA 139 +AE+ + +R I++ + ++ L + F I VD Sbjct: 76 ---VAEMERDLELNRRMHGTIRLGVSETIVQTWLSRFLKHSSRRFPSTDFDITVDVTPSM 132 Query: 140 VDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLN 199 ++ L G+ D L +R + Q + V + + A P+L Sbjct: 133 LNALESGEIDIALMLGPAVLEGFACVKLRDYRLQFYAVPGVLPGAQFTYENAS-SIPILT 191 Query: 200 YSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSG 259 Y RN+Y + L + + + F SS+S ++++AL G GIA + E + + Sbjct: 192 YPRNTYPFDHLRELLFQKTGRAPRIFTNSSIST-IERLALQGIGIALVAEGTLGVTTGNS 250 Query: 260 KLVVLNRDELVIPIQAYAY 278 L + + + P+ YA+ Sbjct: 251 ILKAVPSEIALPPLSFYAF 269 >UniRef50_D0BX38 Transcriptional regulator n=2 Tax=Acinetobacter sp. RUH2624 RepID=D0BX38_9GAMM Length = 295 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 28/265 (10%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F + K +NF++AA V+Q A S+ I LE +G++L NR L L+E G Sbjct: 8 LKTFSEVVKTKNFTKAAAYMGVTQSAVSQSINNLEAQLGIKLLNRSTRSLTLTEAGSRLI 67 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAA-AHSLSLGLLP---SIISQMPPLFTWAI 131 + ++ ++ + ++ D ++I+A A ++ L P ++ Q P + ++ Sbjct: 68 ELVGQNIENIDLGVEQISSMKDLPSGHVRISADAFTIKYYLWPKLKKLVKQYPDI---SL 124 Query: 132 EAIDVDEAVDKLREGQSDC--IFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFN 189 E + +D +EG + + ++DL+ P + F + AS E+ L Sbjct: 125 ELTSENRRIDIAKEGYDAGVRVGNLVEKDLIAVPIS-----KEIPFRLVASPEY---LDK 176 Query: 190 LAQPH-FPLLNYSRNSYMGRLINRTLT--RHSELSFSTFF-------VSSMSELLKQVAL 239 P L + Y+ L + +L + + S FF ++S+ E+ V L Sbjct: 177 YGTPKSIDDLKKHKGIYIRLLTDNSLMAWEFKDKNKSVFFRGPVQLVMTSLDEMFDAV-L 235 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVL 264 DGC IA+LP + ++ + KLV L Sbjct: 236 DGCAIAYLPYFLVKPALEDKKLVSL 260 >UniRef50_B9JLT3 Transcriptional regulator protein n=2 Tax=Rhizobiales RepID=B9JLT3_AGRRK Length = 314 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 38/268 (14%) Query: 15 WLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIF 74 +L+ F + R+F+ AA NVSQPA S+ I+ LE+A G++LF R+ T L+L+ +G+ Sbjct: 13 YLFVFEAAARRRSFTAAAEELNVSQPAVSKTIKLLEEATGLKLFRREHTRLELTAEGQRL 72 Query: 75 HSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHS-LSLGLLPSI--ISQMPPLFTWAI 131 + + + L L LR + ++ ++++ + S + L LLP + P I Sbjct: 73 YRETQQAFDHLHMVLTSLR--TKHSNDTVRVSFSTSFVQLWLLPRLKDFKVKHPDIALRI 130 Query: 132 EAIDVD------EAVD---KLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD- 181 E D E +D +L G+ I ++H ++ PVC +D Sbjct: 131 EESSRDDQDLNEEDIDISARLGAGKWPGIHAWH-------------FVTEEVIPVCNADY 177 Query: 182 --EHGEA-----LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELL 234 EHG L N HF + R + L++ ++ + L+ F ++S + Sbjct: 178 LREHGPINVPADLLNHRLLHFEERHRVRLGWRDWLLHHSVPV-ARLAQDFVFTDALSSIE 236 Query: 235 KQVALDGCGIAWLPEYAIQQEIRSGKLV 262 V G + W ++ + +++G+LV Sbjct: 237 AAVLGQGIALGW--KHLVHDHVQAGRLV 262 >UniRef50_C9PA71 Transcriptional regulators LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PA71_VIBFU Length = 298 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 133/305 (43%), Gaps = 33/305 (10%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L FL++ + ++F++ A +SQ A S++I+ALE +GV L +R ++L+ Sbjct: 1 MNIKQLEYFLSVAQLKSFTKTAEQFFISQTAISQQIKALEHELGVTLLHRNNRIVELTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G++F+S ++++ + ++ + + Q + + LL I+ + PL Sbjct: 61 GEVFYSDAKNIINNIHASKERVANAAMGIQGSLNVGFLPMHGDTLLADILGDFYKKNPLI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAP-FDHIRLFESQLFPVCASDEHGEA 186 I ++ + L +GQ D IF+ D +L P D++ L L+ V Sbjct: 121 EINIADDNITQLYKALFDGQLDVIFTI-DYELENYPSIDYLNLPPIPLYAVVNKTHRLSN 179 Query: 187 LFN-----LAQPHFPLLNYSRNSYMG--RLINRTLT-------RHSELSFSTFFVSSMSE 232 L + L++ F +++YS N G RLI + +H SF V M E Sbjct: 180 LKSLPIDLLSEEAFIVISYSNNLPYGVDRLIKICDSGQFVPKIKHKVPSFEAALV--MVE 237 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERF 291 G G+A LP Y + + E V PI A+ NT +NP F Sbjct: 238 -------AGLGVAVLPNYNRHHHTNVVYIPIEQCQEHVKPIVAW----NTESLNPTLNLF 286 Query: 292 WRELR 296 R+L+ Sbjct: 287 LRQLK 291 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 31/245 (12%) Query: 27 NFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLE 86 NFS+AA V+QP+ S+++ LE+ +GV+LF+R L+++E G+ F R +L Q+E Sbjct: 17 NFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEAGRAFLPHARSILHQME 76 Query: 87 SNLAELRGGSDYAQRKIKIAAAHSLSLGLLP---------------SIISQMPPLFTWAI 131 + A + G S + + + +++ L+P I+ + P+ ++ Sbjct: 77 AARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEARLRIVEETTPVLVESL 136 Query: 132 EAIDVDEAVDK--LREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFN 189 + +D AV LR +CI + P DH R L D GE Sbjct: 137 RNLSIDLAVLALPLRHKDLECIPLLTEPMFAVLPKDHPRASAQTL---SLKDLRGETFVM 193 Query: 190 LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPE 249 L R+ + R ++ H+ ++ F S L + G G++ +P+ Sbjct: 194 L-----------RDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAAGMGVSLVPQ 242 Query: 250 YAIQQ 254 A+ + Sbjct: 243 MAMDR 247 >UniRef50_D0GM40 Transcriptional regulator, LysR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GM40_9FUSO Length = 294 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 129/261 (49%), Gaps = 14/261 (5%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI---FH 75 FL + + + S+AA +SQPA S++++ LE+ + LF R ++L+ +GKI + Sbjct: 9 FLKVSEMGSISKAADKLYISQPALSQQLKNLEKELDASLFIRSNKGIELTGEGKIVYKYF 68 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF-TWAIEAI 134 S LLQ+++ + + + +KI+I+A ++ LP +I + + ++E Sbjct: 69 SMSEKLLQEMKKEIRDKKNNV----KKIRISAVPTMCNYSLPCMIYHLKQHYPNTSVELY 124 Query: 135 DVDEAVDKLREGQSD-CIFSFHDEDLL-EAPFDHIRLFESQLFPVCA--SDEHGEALFNL 190 ++ E S+ C F ED+ + ++FE ++ V + S + + + Sbjct: 125 SRSDSFKIEEELVSERCDIGFVAEDIKNDLVLTSKKIFEEEILLVASNISINYPDFITER 184 Query: 191 AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEY 250 + L+N + + + R ++R + T+ + S+ + +K ++G G+A+LP Sbjct: 185 ELSRYDLINMATENEITRTVSRYINDFESYKI-TYNLESI-DAIKSCVVNGYGLAFLPYS 242 Query: 251 AIQQEIRSGKLVVLNRDELVI 271 I++E+ + ++ ++N D L I Sbjct: 243 TIKKELYNKEMKIINIDNLSI 263 >UniRef50_C7JE36 Transcriptional regulator LysR n=10 Tax=Acetobacteraceae RepID=C7JE36_ACEP3 Length = 298 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 18/170 (10%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 + L + L+K R+FS+AA VSQPA S IR LE +G+ + NR L+E+G+ Sbjct: 4 RQLSYLIALDKYRHFSRAAEHCGVSQPALSAGIRQLESELGITIINRNRRFNGLTEEGQR 63 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP--------- 124 + R Q S+L+ LR + +AQ A S+++G++P + +P Sbjct: 64 VLAWAR----QTVSDLSNLRQEAAFAQD----VAGGSIAIGIMPPTMQVIPLLIESLRAT 115 Query: 125 -PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQ 173 P +I E + +LRE Q + D+ E PFD L++ Q Sbjct: 116 IPALHVSITVCSSAEILHQLREHQIQLGLMYLDQIPPEGPFDTHVLYQEQ 165 >UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=B1KU62_CLOBM Length = 293 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 116/248 (46%), Gaps = 23/248 (9%) Query: 27 NFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLE 86 N ++ A +SQPA S+ I LE +GV+LF+R L L+ +G++F + +R +L + Sbjct: 17 NMTEVAEKLYISQPAVSQTILELESELGVKLFDRINRRLYLTNEGELFLNYVRRILNMYD 76 Query: 87 SNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREG 146 + L+ + K+KI A+ ++ + +LP II + FT + ID A++ + Sbjct: 77 DAIRSLKDINSLKTGKLKIGASTTIGIYILPDIIGK----FTKQYKGIDTSIAIENTK-L 131 Query: 147 QSDCI------FSF-----HDEDLLEAPF--DHIRLFESQLFPVCASDEHGEALFNLAQP 193 SD I F+F ++E++++ F D + S P DE ++ + + Sbjct: 132 ISDMILDNSIDFAFVEGPVYNEEIIKENFCDDELVFITSPEHPWSNKDEI--SITEVDKE 189 Query: 194 HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQ 253 + + R + + + ++++ F +E +K+ G G++ + + I+ Sbjct: 190 KIIMREIGSGT---REVFESYMTANNVNYNIAFELGNTEAIKKAVEAGLGVSCISKRCIK 246 Query: 254 QEIRSGKL 261 EI + L Sbjct: 247 NEINNNTL 254 >UniRef50_D0J169 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=D0J169_COMTE Length = 310 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 89/167 (53%), Gaps = 13/167 (7%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 NI + L F+ + + +FS+AA + ++QPA SR + LEQA+G+ L +R ++L+E Sbjct: 2 NISLRQLRAFVAVAQSSSFSRAADALALTQPAVSRNVTDLEQALGLLLLHRTTREVELTE 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS----QMPP 125 G++ + +L+ L++ L E++G + + ++K+A++ +LS LLP I+ Q P Sbjct: 62 AGRLLLGNLSRVLEDLDACLLEVQGLATQRKGRVKVASSPTLSANLLPQCIARGRQQSPG 121 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIF--------SFHDEDLLEAPF 164 + ++ I D + +R G+ D H + +L PF Sbjct: 122 VNIQLLDRIQSD-VLLSVRSGEVDFGVVIDPSEKQDLHAQTILTEPF 167 >UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=C6CWT6_PAESJ Length = 302 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 47/279 (16%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ NF++AA + + + +I+ALE+ +GV LF+R L L+ Sbjct: 1 MELRQLNTFCTVATTLNFTRAAEALSYVPSNVTMQIKALEEELGVRLFDRLGKQLALTTA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPPL 126 GK F + + +L++L+ + + + + + I+A + LP + SQ P + Sbjct: 61 GKRFLTHAQGVLEKLDEARSVVHDNAQLSG-TLTISANEVICSYRLPPVFQRFRSQHPGV 119 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 ++ E L EG +D ++ + P+C+S E Sbjct: 120 -RLIFRSVPNQELKQTLFEGTTDIVYMLDE-------------------PICSSGLVVEP 159 Query: 187 LFN-----LAQPHFPL----------------LNYSRNSYMGRLINRTLTRHSELSFSTF 225 L LA P PL L + + +R+ + + T+ Sbjct: 160 LVEENFRLLAAPDHPLAKRTVLKLEDFHEEVFLTNEKGCPYRTMFDRSFEKEG-IDSITY 218 Query: 226 FVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVL 264 +E +K+ A+ G GIA+LPE ++ E+ G+LVVL Sbjct: 219 LEFQSAEAIKKCAISGIGIAFLPEIVVEAEVERGELVVL 257 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 11/124 (8%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N + + F+ + +F AA + ++SQPA SRR+ LEQA+G LF R ++LS Sbjct: 2 NFDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELSA 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTW 129 G+ F + RH+L +LE+ L + SD + ++ +A + S +P L Sbjct: 62 IGRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVA-----------CVPSSVPHLLAG 110 Query: 130 AIEA 133 A+EA Sbjct: 111 AVEA 114 >UniRef50_A9D076 Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D076_9RHIZ Length = 310 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 13/253 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 I K L F L +F +AA NVSQPA S +I LE +G L R + LSE Sbjct: 2 ITLKQLTYFEALAHTLHFGRAAERANVSQPALSAQIAELENRLGCRLVERTRGAIVLSES 61 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ R +L ++ S +++ + +++I +++ LLP++ ++ P Sbjct: 62 GQRLLPAFRRVLAEVRSIEEQVQQTTGLLTGRMRIGMIPTIAPYLLPALAPELTKRFPQL 121 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--E 185 + + + V +LR G D + + + E H LFE + ++++ + Sbjct: 122 DFGVREAITETLVSQLRNGDLDAVIAAL--PIKETGLSHRVLFEDRFVMAVSNNDRDILD 179 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLT---RHSELSFSTFFVSSMSELLKQVALDGC 242 + N + F L + R ++ L+ HS+++ F +S++ LL+ VA G Sbjct: 180 SPLNRHKAAFDRLLLLEEGHCLR--DQALSVCQEHSDVALVNFGATSLTTLLQMVA-HGM 236 Query: 243 GIAWLPEYAIQQE 255 G LPE A+ E Sbjct: 237 GRTLLPEIALSAE 249 >UniRef50_C6D1Z1 Transcriptional regulator, LysR family n=2 Tax=Bacillales RepID=C6D1Z1_PAESJ Length = 294 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 24/271 (8%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + NIE F+ + +F++AA +SQP+ + RI+ LE+ + LF+R + L Sbjct: 3 IENIEA-----FVYVNHYGSFNKAAEVLFLSQPSVTARIQTLERELDCRLFDRLGKQIML 57 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 +E+GK F + +LQ ++ L+ Q +++I + S+S L+P ++ ++ LF Sbjct: 58 TEKGKQFLPYAQQILQTIQKGRLHLQEKGARPQ-ELRIGSTVSVSNYLIPDLLPRLTRLF 116 Query: 128 ---TWAIEAIDVDEAVDKLREGQSDCIF-------SFHDEDLLEAPFDHIRLFESQLFPV 177 T+ + D+ V KL + + D F S E P IRL+ + P Sbjct: 117 PRLTFKLTTAPSDDLVKKLLDKEIDIAFVRKLVHPSLQSFSYYEDP---IRLYVYEGHPF 173 Query: 178 CASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQV 237 E G + + PL+ + S ++R H E F + SE K++ Sbjct: 174 A---EEGRVSIDEIRDQ-PLVFFECGSLDWLRLHRVF-EHLEQPPRIVFHADNSETAKKL 228 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDE 268 L GI +LP ++E+ G+L+ + +E Sbjct: 229 VLQKAGICFLPGLCAREEVSKGRLIPIEIEE 259 >UniRef50_A0LGP0 Transcriptional regulator, LysR family n=2 Tax=Deltaproteobacteria RepID=A0LGP0_SYNFM Length = 295 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 108/269 (40%), Gaps = 33/269 (12%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ NF+QAA N +Q S +I+ALE IG LF R +QL+E Sbjct: 1 MEMQRLQTFRTVAALMNFNQAANILNCAQSTVSAQIKALENEIGTMLFKRIGKSVQLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G LL + LAE+RG + + +++ LP I+ P F Sbjct: 61 GAKMLIYADKLLAIKDEALAEVRGNKP-GSGMLTLRMPQTMATYYLPHILRSYQPRF--- 116 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE--HGEALF 188 +R + C + +L A D LF + E + LF Sbjct: 117 ----------PGIRLDITSCALHSLENELRIATVDLAFLFAESIGAKNLESEFLGSDPLF 166 Query: 189 NLAQPHFPLLNYSRNSYMG----------------RLINRTLTRHSELSFSTFFVSSMSE 232 + P PL R + ++ +TLT +++ +T + E Sbjct: 167 FVTYPGHPLSTRRRVDFKNLEGEVLLLPKSDCGYRMVLEQTLTAE-KVTPATIIEMNSIE 225 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIRSGKL 261 +KQ + G G+ +PE A++ EI+ G++ Sbjct: 226 AIKQAIMAGLGVTVIPEIAVRSEIKEGRI 254 >UniRef50_C6BG32 Transcriptional regulator, LysR family n=1 Tax=Ralstonia pickettii 12D RepID=C6BG32_RALP1 Length = 302 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 60/264 (22%), Positives = 120/264 (45%), Gaps = 41/264 (15%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F + NF++AA ++++ A SR+I +LEQ +GV LF RQ + L++ G+++ + Sbjct: 15 FEAAARLENFTRAANELSITESAVSRQIISLEQNLGVTLFVRQNKRVHLNQTGRLYADHV 74 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPS-----IISQMPPLFTWAIEA 133 R L L+SN L ++ +L + +LP +I +M +++ E Sbjct: 75 RETLSALDSNAWLLSS---------RVNNVSNLDIAVLPEFASNWLIPRMRDFYSYH-EN 124 Query: 134 IDVDEAVD----KLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVC------ASDEH 183 + ++ + + F + L+A D LF+ ++ PVC + D + Sbjct: 125 VRINMVTTFGPISFDKKNFEAAICFGTQTCLDANTD--LLFDEEIIPVCSPQLITSPDCY 182 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS----ELSFSTFFVSSMSELLKQVAL 239 + L N +PLL ++ Y + + H + F+ + +L A+ Sbjct: 183 PDELLN-----YPLL---QSGYRAKAWETWFSYHGVDWRQAKLGEFYETYF--MLISAAV 232 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVV 263 G G+A +P + +++E++ KL+V Sbjct: 233 AGLGVALVPRFLVERELQQEKLIV 256 >UniRef50_O06703 HTH-type transcriptional regulator bbuR n=1 Tax=Bordetella bronchiseptica RepID=BBUR_BORBR Length = 325 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 26/295 (8%) Query: 9 HN-IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 HN ++T L F + K ++FS+AA SQP +R+I LE+ +GV LF R L Sbjct: 12 HNPLDTDLLNVFCWVAKTQSFSRAAAELGTSQPVITRKIGRLEECLGVALFVRSNRGCVL 71 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 + G + + +L QL E+ + + + H+ S + P ++ P+ Sbjct: 72 TAAGTVLIGKAPSILLQLAEIKEEVSHSASVVSGSLSMGITHAASTVMAPRLL----PVI 127 Query: 128 T--WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFD---HIRLFESQLF--PVCAS 180 W +DV EA+ + + H E L FD H L L +C Sbjct: 128 ARRWPKLQVDVMEALSRTLVER-----VLHGELALAVLFDPPPHPDLICRPLLIERLCLV 182 Query: 181 DEHGEALFNLAQP------HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELL 234 L +A P PL+ S + L+ +E + +SM+ +L Sbjct: 183 GNPQSDLRTMAPPTIRDLARLPLMLPSGGQIIRNLLEDAFAEINEPLKPVYEAASMA-ML 241 Query: 235 KQVALDGCGIAWLPEYAIQQEIRSGKLV--VLNRDELVIPIQAYAYRMNTRMNPV 287 +++A+ G G L + + +++ +GKL+ L +V+ + R +TR+ V Sbjct: 242 REMAVQGIGYTLLTQGGVAEDVAAGKLIAQALPDKGMVVTLTLITKRESTRLRNV 296 >UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C6CZP2_PAESJ Length = 300 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 65/294 (22%), Positives = 135/294 (45%), Gaps = 23/294 (7%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIF- 74 L LT+ K +F +A N++QPA S +I+ LE+ L +R P+ L++ GK+F Sbjct: 6 LETLLTISKTMSFRKAGELLNLTQPAVSAQIKTLEEEFKTVLIDRN-QPVTLTDHGKVFL 64 Query: 75 -HSQ-IRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTW 129 H++ I ++++L+ L++L Q I + S+++ +LP ++S PL Sbjct: 65 EHAERILAVVEELKQKLSDLNA---IPQGHIVLGTTSSMAIQILPRVLSYFQDQYPLIKT 121 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH-----G 184 I + + + + G D ++ E + P + F + AS H Sbjct: 122 TIHTMPSSQVLASVENGSVDMGITYISE---KNPNMDSSILYYDSFVLVASPAHPLSQVA 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ + +P + + ++ R +++ +++ +SS E+ + V ++ GI Sbjct: 179 HTTIDMIK-DYPFIMLAPDTLGRRFLDQIFKKNNIQPNIIMELSSSEEVKRMVEIN-LGI 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDEL--VIPIQAYAYRMNTRMNPVAERFWRELR 296 A + + +I E+R G L ++ EL P+ A Y+ +N ++F +L+ Sbjct: 237 AVVSKLSIANELRLGSLKIIKVTELEPYHPV-AVVYKSGRYLNTAMQQFLSDLK 289 >UniRef50_B4SSL0 Transcriptional regulator, LysR family n=8 Tax=Xanthomonadaceae RepID=B4SSL0_STRM5 Length = 322 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 119/265 (44%), Gaps = 38/265 (14%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 K L F + + S+AA + VSQPA S +++ALE+ +GV LF R L S +G++ Sbjct: 19 KPLRAFCQTVRLGSVSRAAEALFVSQPAISLQLQALERELGVPLFERSGRRLVPSREGQL 78 Query: 74 FHSQIRHLLQQLESNLAELRG---GSDYAQRKIKIAAAHSLSLGLLPSIISQM----PPL 126 + + L++ L+ A R G D + + IAA S L LLP I+ + P + Sbjct: 79 LYEMAQPLVENLDGLEARFRDKVRGLDAGE--LNIAANSSTILYLLPKIVERFRLHHPDV 136 Query: 127 FTWAIEAIDVDEAVDKLREGQSD-CIFSFHD-------------EDLLEAPFDHIRLFES 172 AI D D LRE +D I S D E +L AP DH Sbjct: 137 RLTLHNAISAD-GTDLLREDAADLAIGSMTDVPADLSYAPAYRFEQVLIAPHDH------ 189 Query: 173 QLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSE 232 P+ + E L ++A+ +PL+ + RL+++ RH ++++ E Sbjct: 190 ---PLASGGEL--ELADIAR--YPLVLPPKRQITYRLVDQVFQRH-RIAYTVALEVGGWE 241 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIR 257 ++KQ G GI+ +P + + R Sbjct: 242 VIKQYVAMGMGISIVPALCLNEADR 266 >UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9N7_9FIRM Length = 291 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 19/266 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + FL + + +FS+AA SQ A S ++ LE + LF+R ++L++ Sbjct: 1 MELRTINTFLHIAELHSFSRAARELGYSQSAVSAQVAQLEAELETPLFDRVGKTVRLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ---MPPLF 127 G+ F + R LL E A L+ + +++A A S+ LP ++ + + P Sbjct: 61 GQTFLTYARSLLATAEQAKAALQPARQVSG-TLRVALADSVCSTFLPDLLQRYHALCPQV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + DE + L Q D ++ D+ LL+ F L + P+C G L Sbjct: 120 ELVLRTATDDEMLQMLGSNQIDLAYTL-DKPLLQPSF---VLAVDEPEPICVVAPAGHPL 175 Query: 188 FN--------LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 LA F LL SY L ++ + L+ F + LL Q+ Sbjct: 176 AGQAEVTLQELAGQEF-LLTERGMSYRDAL-DQCMAAQG-LAIKPFLELGSASLLCQMVE 232 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLN 265 G G+++LPEY +Q + +G L LN Sbjct: 233 HGMGLSFLPEYIVQNALAAGTLARLN 258 >UniRef50_B7GJV0 Transcriptional regulator (LysR family) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJV0_ANOFW Length = 294 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 119/264 (45%), Gaps = 27/264 (10%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F+TL + +NF++ A ++SQP+ S I+ LE+ +LF R LQ++ G++ + Sbjct: 6 LKTFITLAEVKNFTKTADILHLSQPSVSLHIKNLEKEFQTKLFIRSPKELQMTPTGELLY 65 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM----PPLFTWAI 131 + + ++ E ++ D + +KI A+ ++ +LPS + M P L I Sbjct: 66 DRAKKMITLYEQTKQDILEHHDCVKGTLKIGASFTIGEYVLPSFLFSMQNDYPELHLEVI 125 Query: 132 EAIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEH----- 183 + E V+ +R Q+D ++++L PF L + AS++H Sbjct: 126 IG-NTKEIVELVRTYQADVGLIEGQTNEKELAVYPFMQDELV------IVASNDHPLIHQ 178 Query: 184 GEALFNLAQPHFPL---LNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 + N Q + L Y I R + L + + S ++ +K+ + Sbjct: 179 KDVAINDLQNQIWITRELGSGTREYFNHFI-----RSNGLKVKSLMIISSNQGIKETLMR 233 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVL 264 G +A+L + I++E++ G L V+ Sbjct: 234 GNSLAFLSRHVIERELKHGHLSVV 257 >UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=cellular organisms RepID=D0Z9H4_EDWTE Length = 302 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 3/150 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L FL + NF+QA+V N+SQPA S IR+LE A+G LF R ++L+ + Sbjct: 3 MSIKQLRAFLAVAHTLNFAQASVRLNLSQPALSLAIRSLEDALGGALFVRTTRQVRLTPE 62 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ F +R LL ++ +R K+ IAA S + LP I+ + + Sbjct: 63 GEAFFPLVRQLLVDWDNTTETIRQRFTLQVGKVAIAAMPSFAANPLPFILQRFRRRYAGV 122 Query: 131 IEAID--VDEAV-DKLREGQSDCIFSFHDE 157 + ++EAV + + EG+ + +F E Sbjct: 123 NVVVHDVINEAVYEMIAEGRVEMGIAFEPE 152 >UniRef50_C6B9F9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C6B9F9_RHILS Length = 296 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 4/115 (3%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L FL + + F+ AA SQPA S+ I ALE +GV LFNR + L++QG+ + Sbjct: 7 LKAFLAVVETGGFTAAARRTGTSQPAVSKAIGALENRLGVALFNRSTRNVTLTDQGQRYF 66 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLS----LGLLPSIISQMPPL 126 +++ LL+++++ E+ G + I+IA +L L ++P ++S+ P L Sbjct: 67 DRMKPLLEEIDNANREVIGSAVDMSGSIRIAVPTTLGRLHILPIIPDLLSRFPKL 121 >UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G2D8_ACICJ Length = 303 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 32/260 (12%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L+ F+ L + R F++AA N+ Q A S IRALE+ + LF R ++L+ Sbjct: 1 MELRQLHHFVALAEERQFTRAARRVNIVQSALSTSIRALERELDAPLFVRSTRDVRLTGA 60 Query: 71 GKIFHSQIRHLLQQL---ESNLAELRGGSDYAQRKIKIAAAHS----LSLGLLPSIISQM 123 G+IF + R ++ + S +AE++G + +KI S L L LL + Q Sbjct: 61 GEIFLEKARLAIEAVRDARSAVAEVQG---LKRGTLKIGTVQSLPAFLDLPLLLARFHQR 117 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCAS 180 P + D+ R G D F H DL+ + ++ C Sbjct: 118 HPGIEIRLIQGSSSALADRTRAGGIDAAFFPVGTHLTDLVTT-----MIACDEVVLACPR 172 Query: 181 DEHGEALFNL---AQPHFPLLNY-----SRNSYMGRLINRTLTRHSELSFSTFFVSSMSE 232 E L + A FP +++ +R GR + + RH + F VS + Sbjct: 173 GHPLEGLTGVTLEAIKDFPFVDFETGWGTRRLVDGRFGDAGIGRH-----TAFEVSDLDT 227 Query: 233 LLKQVALDGCGIAWLPEYAI 252 +LK V+L G GIA LPE + Sbjct: 228 MLKLVSL-GLGIALLPETVV 246 >UniRef50_C7RAV2 Transcriptional regulator, LysR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAV2_KANKD Length = 288 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 65/287 (22%), Positives = 120/287 (41%), Gaps = 17/287 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T L FL++ +F+ AA ++QPA S+RI+ LE +G LF+R + +E Sbjct: 1 MDTDLLRTFLSVASIGSFTLAAKKLQLTQPALSKRIKRLETIVGTNLFDRVGNHVIETEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ---MPPLF 127 G++ Q +L +++ ++R + ++ I +H + L LLP + Q P Sbjct: 61 GRLLREQAPAILGSIDNTFQDIRDLTGRVSGQLHIGTSHYIGLHLLPDYLEQYIDTYPEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSD-CIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 I+ ID + A D++ G + + +F + +H +++ L VC D Sbjct: 121 DLNIDFIDSELAYDRVLSGDLELALLTFPSQ--ANPRLEHQLIWQEALQMVCHQDYE--- 175 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFF--VSSMSELLKQVALDGCGI 244 L P L NY R L H + V + + L L C + Sbjct: 176 LLAHDNPMNQLSNYPCILPPAHTFPRELFEHQLETLGVHLGKVKTANYLEVIAKLVACKM 235 Query: 245 AW--LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAE 289 W LPE + + + ++ + +L + YR N ++ A+ Sbjct: 236 GWTLLPERLVSEPLT----LIGDSRQLSVRSMGIIYRTNKTLSNAAQ 278 >UniRef50_B3PFN1 Transcriptional regulator, LysR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFN1_CELJU Length = 306 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 24/299 (8%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T+ L F+ + +FSQAA +++QPA S+RI LE+ + LF+R + L++ Sbjct: 1 MDTQQLQAFVAIANTGSFSQAANQLHLTQPAISKRIALLEEQVKAPLFDRIGRQIALTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+I + + +L ++++ + K+ IA +H + L LP + Q PL Sbjct: 61 GQILLPKAKLILAEVDAAAQAVADLQGTVSGKLSIATSHHIGLHYLPPYLQQFAQDFPLV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSF----HDEDLLEAPF--DHIRLFESQLFPVCASD 181 + +D + A ++ +G+ D D + P D ++ + P+ Sbjct: 121 KLDVHFLDSELAHQEVVQGRFDLALVTLALEPDIRIASHPLWMDELQFVAAPSHPLA--- 177 Query: 182 EHGEALFNLAQ-PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 H + L NLAQ H+ + N+Y RLI TL L + V++ + +K L Sbjct: 178 -HMQTL-NLAQLSHYDAIMPDPNTYTTRLIT-TLFDAEHLPLNIAMVTNHLDAIKM--LL 232 Query: 241 GCGIAW--LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 G G+ W LP+ + + + L++ +V P+ A +R + N A +F L + Sbjct: 233 GIGLGWGVLPKRLLDSSLSR---LALSQAAIVRPLGAIHHRQRSLSN-AANQFLNLLHQ 287 >UniRef50_D0J2N5 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J2N5_COMTE Length = 300 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 19/262 (7%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 + + F+ + + NFS+AA S +++ A S +I LE +GV LF+R + L+E G++ Sbjct: 5 RLITTFMNVAEAENFSRAAQSLHLTPQAVSLQISQLESWLGVRLFHRSTRRMALTEDGRV 64 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WAIE 132 F+ + R LQ ++ ELR + IK+A++ SL L+ +++Q + IE Sbjct: 65 FYERCRVGLQSIDQGERELRDRASGITGSIKVASSLSLGQLLVAPLLAQFNESYPDIRIE 124 Query: 133 AIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQL----FPVCASDEHGEALF 188 + + D + G D ++ P ++ L ++ +CA+ + A Sbjct: 125 LVTQNPWPDTVDLGM--------DIGVIGGPLLNVSLVARRVGRFTHMLCAAPAYLAAKG 176 Query: 189 NLAQPHFPL------LNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 P L L + R + + ++ R + L F++ + +Q+ L G Sbjct: 177 TPKSPQELLQHCCIGLRHPRTNRIWPWTFQSTRRQTMLEPPFSFITQDPAVQRQLVLQGA 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVL 264 GI L +Y I SG LV L Sbjct: 237 GIGQLTDYFAGPLIASGALVEL 258 >UniRef50_Q1QB59 Transcriptional regulator, LysR family n=3 Tax=Psychrobacter RepID=Q1QB59_PSYCK Length = 341 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 4/146 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L F+ + + R+FS AA +SQP+ SR ++ LE +GV L +R PL L+E Sbjct: 1 MDLKQLNAFIAVAELRSFSAAATKIGLSQPSLSRLLKQLEIDMGVMLVDRYHRPLHLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G F+ +I +L ++++ + + S + I S+ GLLP II+++ P Sbjct: 61 GTFFYDKISTILTEVDTVVGMTQRLSA-PSSALNIGFVPSILYGLLPEIIARLKQSNPEI 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFS 153 ++ I + +D L+ G D F Sbjct: 120 DVNLKDISSYQQMDALKSGDIDIGFG 145 >UniRef50_B2U625 HTH-type transcriptional regulator TdcA n=1 Tax=Escherichia coli 53638 RepID=B2U625_ECOLX Length = 309 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 4/175 (2%) Query: 4 CGAILHNI-ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQV 62 C I+ + ++K L FL + + A+ N++QP +R IR LE +G LF R Sbjct: 2 CDIIMDKLPKSKSLMVFLEVARSGGIMNASKKLNITQPTVTRIIRELENYVGTPLFERTC 61 Query: 63 TPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ 122 + + L++ G +FH ++ + L+ +++E+R +K + + + +LP +I++ Sbjct: 62 SGVSLNQAGNVFHGRVLSYINGLQKSISEIRKEFGKDNKKFSLGYSSLVGYTVLPDVINE 121 Query: 123 MPPL---FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQL 174 L + +I + + + L G+ DC D L + LF+S Sbjct: 122 FRELNRDVSISIYEGQLSDLLPLLNTGRLDCAIGTLLNDELPYEYSAELLFKSSF 176 >UniRef50_Q485T8 Substrate-binding transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q485T8_COLP3 Length = 308 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 27/260 (10%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+T+ + NFS+AA V+ A SR+I LE A+G++L R L L+E GK+ Sbjct: 16 FVTVIEQGNFSKAAKKLGVTPSAVSRQISRLEDALGIKLLQRTTRQLALTESGKLTFDYC 75 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLL-PSIISQMPPLFTWAIEAIDVD 137 + +++ + + R + ++++A SL+ +L P + + + D Sbjct: 76 KQMVESADQAVNASRSATSTVSGLLRVSAPKSLANKVLRPLFVEFLKCYPDIQLHLKVTD 135 Query: 138 EAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPL 197 +D + +G F H D +I++ + +CAS E Q H P Sbjct: 136 RILDPIHDGVD---FLIHINDYPIEALVNIKIGRVEQV-LCASPE-------FLQSHTPP 184 Query: 198 LNYSRNSYMG-------------RLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + Y+ R IN + + + + ++ + S++ + G GI Sbjct: 185 THPDDLKYLSCICLGENMVDNRWRFINE--NQQTTVQVAGSYLLNHSDMRRDAIEQGFGI 242 Query: 245 AWLPEYAIQQEIRSGKLVVL 264 LP+Y QQ I++GKL+ L Sbjct: 243 GPLPDYIAQQGIKTGKLIPL 262 >UniRef50_D0STU0 LysR bacterial regulatory helix-turn-helix protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STU0_ACILW Length = 188 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 93/179 (51%), Gaps = 9/179 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+T+ + ++F++AA +QP+ S++I+ LEQ +GV LF+R ++L+++ Sbjct: 1 MELRHLRYFITVAQQQSFTKAAEKLFTAQPSLSQQIKDLEQEVGVMLFDRSSRKVKLTDE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ F L+ + +A R + +I I + + ++P I++Q+ P Sbjct: 61 GQAFQIYAEKALENAKLAVAAARQVAQQKNNQIHIGFLNVAEIKVMPQILAQLKKTMPDL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSD-CIFSFHDEDLLEAP-FDHIRLFESQLFPVCASDEHG 184 + ++ E + +L+ + D CI FH L+ P F++I L Q++ + A H Sbjct: 121 KIHLHSLTCMEQIQRLKNAELDLCITRFH----LDHPDFENIHLLTEQIYLIAAQHLHS 175 >UniRef50_Q0B9D7 Transcriptional regulator, LysR family n=19 Tax=Burkholderia RepID=Q0B9D7_BURCM Length = 326 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 64/114 (56%), Gaps = 1/114 (0%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N++ + F + +C+ SQAA ++QPA +RR++ LE+A+GV L +R P + ++ Sbjct: 19 NMKISDIDAFAAVVRCQTLSQAATELGMTQPAITRRVQNLEEALGVTLLDRNTKPPRPTD 78 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM 123 G+ Q R +L+++++ L EL G + ++ L +LP +I+++ Sbjct: 79 IGRQVFEQCRAILREVDA-LRELTAGQRPPAGEFRVGLTQGLGELMLPGLIARL 131 >UniRef50_Q6MNV3 LysR-family regulatory protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNV3_BDEBA Length = 287 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 41/283 (14%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F + ++ + AA + NVSQPA S+ IR LE +G EL +L+E+G++ + Sbjct: 12 FSKAAELQSLAAAAKALNVSQPAISQAIRKLEDTLGCELLLHTKNRFKLTEEGRLLLERS 71 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAI---D 135 R +L QLE AEL+G S+ + IA + +++ LLP + I Sbjct: 72 RGILSQLEDLKAELKGRSEIVTGSLSIATSSAVAHYLLPPRLKDFMKAHVEVQPEIHFGT 131 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNL----- 190 V E + +R G++D F E+ + + FE++L GE F Sbjct: 132 VPEIAELVRGGKAD--FGIIIEE------NRLPGFENRLL--------GEGGFTCVIRTG 175 Query: 191 AQ-PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPE 249 AQ P P ++ S + + RH+ E++ Q++L G G+ ++P+ Sbjct: 176 AQWPAAPRFLATQESPGWSELQKAWRRHTGTDARAALTVENWEVISQMSLLGMGVGFVPD 235 Query: 250 Y----------AIQQEIRSGK------LVVLNRDELVIPIQAY 276 + A +Q I +GK L+ L +L P + + Sbjct: 236 FIAENQSGLKAAEEQNIWAGKIRYKIYLIHLGEHQLAKPARVF 278 >UniRef50_A7UH62 Putative LysR family regulator n=1 Tax=Desulfotignum phosphitoxidans RepID=A7UH62_9DELT Length = 313 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 25/283 (8%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 MDD + ++ L F LEK + S+ A ++QPA S+ I+ALE GV LF+R Sbjct: 1 MDDSNSKYSDMNVYQLRTFCVLEKKGSVSRTAQELYLTQPAVSQHIKALESFYGVGLFDR 60 Query: 61 QVTPLQLSEQGKIFH---SQIRHLLQQLE---SNLAELRGGSDYAQRKIKIAAAHSLSLG 114 L L+E GK + I +L+ + + S+ +EL+ GS I I A++++ + Sbjct: 61 VDKKLVLTEAGKTLYHYTGLIFNLINETKRAISDFSELKRGS------ICIGASNNIGVY 114 Query: 115 LLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRL----F 170 +LPSI+ + F I++ ++D R + + + D ++EA L + Sbjct: 115 VLPSILGE----FKNGFPQINIQVSIDTTRVIEQKLLSNEIDIGIVEAQVRSSDLVLEHW 170 Query: 171 ESQLFPVCASDEHGEALFNLAQPHF----PLLNYSRNSYMGRLINRTLTRHSELSFSTFF 226 ++ + S H +P P + R S R++ + + + + Sbjct: 171 GAEKLILITSAMHPWTQLKSIKPDMLLDEPFIVGGRGSGTRRVLEEKMPNVMK-KMNVYL 229 Query: 227 VSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDEL 269 +E +K+ + GI+ E + +E++SG+L + D + Sbjct: 230 ELGSTEGVKRAVEENLGISICGENTVSRELKSGQLKAIKIDGI 272 >UniRef50_Q13GN5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GN5_BURXL Length = 329 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 29/261 (11%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 FL + + FS AA V ++R+ LE IG LF R ++L+ GK + Sbjct: 34 FLLVAETGGFSSAARQLRVVPSVVTKRVTQLEAEIGRPLFVRTTRRVELTPTGKAALAHA 93 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFTWAIEAID 135 R ++ + ++ G ++K+ A +L+ L +I++ P T +E + Sbjct: 94 RDMVLAYDRMTGDMTGDVSELSGRLKVKAPSALTYLHLAKVINRFLIRHPKVT--LELLL 151 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV----CASDEHGEALFNLA 191 +D V+ EG I L +D I E LFP+ AS E+ + Sbjct: 152 IDRPVNPATEGFDLVITG------LPPSYDQID--EIPLFPIQRMLFASPEYLAEMGTPL 203 Query: 192 QP----HFPLLNYSRNSYMGRLINRTLT-RHSELSF---STFFVSSMSELLKQVALDGCG 243 QP H L YS Y+ + TL RH ++ STF + + +++ Q DG G Sbjct: 204 QPEDLAHHRCLQYS---YLSAGMTWTLNGRHGQVDVHVNSTFQTNDI-QVMHQAVTDGLG 259 Query: 244 IAWLPEYAIQQEIRSGKLVVL 264 I LP YA Q+ + +G+L+ + Sbjct: 260 IGILPGYAAQKALENGRLIAV 280 >UniRef50_B5WHI7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. H160 RepID=B5WHI7_9BURK Length = 323 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 28/306 (9%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 + L F + NFS A V+ A S++I LE +G LF R L ++++G+ Sbjct: 13 RALKTFAATVESTNFSAAGRQLGVTPGAVSKQIGMLETLLGCRLFQRTTRHLSVTDEGRR 72 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLS-LGLLPSI--ISQMPPLFTWA 130 ++ R QQ+E +A L +K++ + S + LLP + + P T Sbjct: 73 LYAMAREPAQQIEDAIAALSSNETQLSGTVKVSLPIAFSRVALLPVLGRFRERYPQVTLD 132 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS----DEHGEA 186 + + VD + EG I HD D R S +CA+ + HGE Sbjct: 133 LRF--ENRHVDLISEGYDCAIGQLHDTDSSVVA----RTLASLTLILCAAPAYLERHGEP 186 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLIN-RTLTRHSELSF--STFFVSSMSELLKQVALDGCG 243 H L+ + R+ GR+ + L R+ E+ F + + S +E L +VA+ GCG Sbjct: 187 QTIEDLEHHELIAF-RSPSSGRIQTWKLLARNKEVVFEPGSHLIVSDTEALTEVAVGGCG 245 Query: 244 IAWLPEYAIQQEIRSGKL------VVLNRDELVIPIQAYAYR--MNTRMNPVAERFWREL 295 IA L + I +G+L V R ++ I YA R + R+ E E+ Sbjct: 246 IALLGAHHAAALIAAGRLQRVLPKFVSRRSDICI---YYAARRHLPPRVAAFVEFVVEEV 302 Query: 296 RELEIV 301 R EIV Sbjct: 303 RHSEIV 308 >UniRef50_UPI0001B4C1F4 LysR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C1F4 Length = 297 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/275 (25%), Positives = 109/275 (39%), Gaps = 36/275 (13%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L FL + + +F++AA + Q + + I+ALEQ +G LF R + L+ Sbjct: 1 MELKHLTTFLAVARHMSFTRAAQDLDYVQSSVTAHIKALEQDLGAALFERLGRRITLTHA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSD---YAQRKIKIAAAHSLSLGLLPSIISQMP--- 124 G+ R L Q E + G S + ++IAA SL LLP ++ + Sbjct: 61 GRELLPHARQLAHQAEQARQAVEGASGDPRTIRGTLRIAAPESLCAHLLPPVLRALMDHF 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P + + L EG D F E+ + AP L Sbjct: 121 PHLRVVFGPAGRNTLLTSLNEGTLDAGFLL--EEKITAPMATTELLAQ------------ 166 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTL-----------TRHSELSFSTFFVSSMS-- 231 E L +A P PLL + R+ L + TL EL + ++M Sbjct: 167 EPLRLIAHPGHPLL-HRRHVDTADLADETLLLIEPGCAQRDVMDRELGRAAIHPTTMEFV 225 Query: 232 --ELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVL 264 E LK+ A G G+A LP A+ E+ G++ L Sbjct: 226 SVEALKRCAAAGLGVALLPAAAVTDELARGEVAPL 260 >UniRef50_Q9RLJ6 Putative regulator of LysR family n=2 Tax=Oenococcus oeni RepID=Q9RLJ6_OENOE Length = 287 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 21/183 (11%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +++++L F+TL K +N++Q A S +SQ + ++RI+ +E+ +GV LFNR ++LS+ Sbjct: 1 MDSEYLKTFVTLAKRKNYTQVADSLYISQSSITKRIQKIEKQLGVNLFNRNTKSVELSKY 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAH--SLSLGLLPSI----ISQMP 124 G I+ +LQ + L +KI A H SL +G +PSI IS+ Sbjct: 61 GYIYLEYAEKILQLEQECL-----------KKIDQAVVHDNSLIIGSIPSIGQYGISKEI 109 Query: 125 PLFT--WAIEAIDVDEAVDKLRE--GQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 F +E + E KL + C F+F E F I + Q+ V Sbjct: 110 TNFIKDTGVEIKIITEPSGKLENLLHSNQCDFAFIREVKDRKYFKRIPYAKDQMMAVLPK 169 Query: 181 DEH 183 + H Sbjct: 170 NHH 172 >UniRef50_A6DQJ6 Probable transcriptional regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQJ6_9BACT Length = 291 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 25/287 (8%) Query: 27 NFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLE 86 +F AA +QPA S I LE +G++LF+R L+ G+ +I +Q+ Sbjct: 17 SFQAAADKLWKTQPAISMSINKLETELGLQLFDRGHRKTTLTAHGQ----RIYEYAEQML 72 Query: 87 SNLAELRGGSDY----AQRKIKIAAAHSLSLGLLPSIIS---QMPPLFTWAIEAIDVDEA 139 N E+ S Y + +I IA L L + Q P I + Sbjct: 73 INAEEITSLSQYLNEAHEEEIAIAIDTICPLKTLLILFKNFFQSYPKTRLKINFEVLGGT 132 Query: 140 VDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLN 199 +++L + ++ + S + +P D I L++ + PVCA + NL ++ N Sbjct: 133 LERLEQDKAHIVIS--NLGSPSSPLDRIPLWDINMTPVCAPNS-----LNLDDQNYISTN 185 Query: 200 YSRNSYMGRLINRTLTRHSELSF----STFFVSSMSELLKQVALDGCGIAWLPEYAIQQE 255 + S + + R + S +VS + E+ K++ + G G +P++ I+ E Sbjct: 186 KLKRSPQIVIPETSEARSNSKSLLQGGQRHYVSDL-EIKKEMLMAGLGWGSMPQHKIKNE 244 Query: 256 IRSGKLVVLNRDEL-VIPIQAYA-YRMNTRMNPVAERFWRELRELEI 300 + SG+L+ N D L I I YA R + R PV+ W +L L I Sbjct: 245 LASGQLISFNSDHLETISIPFYACRRQDKRHGPVSSALWEQLHYLHI 291 >UniRef50_Q0KCL9 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KCL9_RALEH Length = 302 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 37/274 (13%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F + +F+ AA +V+Q A S+++R+LE +GVELF R L L+ G+ + Sbjct: 11 LQAFEAAARHNSFTVAARELHVTQGAVSKQVRSLEAYLGVELFQRVRQRLMLTTAGERYL 70 Query: 76 SQIRHLLQQLESNLAEL-----RGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 +I L +LE+ EL RGG + IA+ +L L I ++P F Sbjct: 71 ERIGPSLNELEAATVELMARQGRGGV------LHIASMPTLGAKWL---IPRLPQFFARH 121 Query: 129 --WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVC-----ASD 181 +E + + D E D F D + D++ ++ PVC AS+ Sbjct: 122 PEVKLEFVPHAQGYD-FSEPDLDAAIRFGDGVWPGSLADYMT--GREVLPVCRPGLLASE 178 Query: 182 EHGEALFNLAQPHFPLLNYSR-----NSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQ 236 G A A +PLL+++ + L T S F F LL Q Sbjct: 179 PGGVAPTPAALLRYPLLHHTTVPEAWPDWFATLGVPTREAWSGARFDQF------SLLTQ 232 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELV 270 AL G GIA +P I++E+ +G LVV + +++ Sbjct: 233 AALSGLGIALIPRCLIEEELATGALVVAHPAQVL 266 >UniRef50_B5WC59 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. H160 RepID=B5WC59_9BURK Length = 326 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 4/132 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 E + L F+ +C +F AA V+ PA S+ I ALE+ +GV LFNR L L+ +G Sbjct: 3 EIRNLQPFVEAVRCGSFIAAASRLQVTPPAVSKSIAALERELGVRLFNRTTRKLSLTSEG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAI 131 + F ++ LL QL+ +A++R ++ + IK++ + L +++ F Sbjct: 63 RQFFQRVAPLLSQLDEAVADVRRSPEHPEGLIKVSVTPTFGRHCLSPVLAA----FLQRY 118 Query: 132 EAIDVDEAVDKL 143 +++D + D++ Sbjct: 119 PLVEIDISYDEI 130 >UniRef50_C9L6F7 Transcriptional regulatory protein n=2 Tax=Firmicutes RepID=C9L6F7_RUMHA Length = 299 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 125/291 (42%), Gaps = 18/291 (6%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F T+ N S+AA +SQPA S+ IR LE+ + V LF+R +QL+E+G++ + + Sbjct: 11 FYTVANTGNISKAAARLYISQPAISKSIRKLEENLEVSLFSRNSRGVQLTEEGELLYHYV 70 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSL-SLGLLPSI--ISQMPPLFTWAIEAID 135 ++ LE +++ + I I + +L LLP + + P +IE Sbjct: 71 QNAFYSLEKGETQIKKIHELGIGHIHIGVSTTLCKYVLLPYLKEFIETHPHIRISIECQS 130 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHF 195 + + L+E + D E L FD + E + EH + ++ F Sbjct: 131 TNHTLQLLKENKVDLGLIGKPERLYHTHFDSLGEIEDIFVCTKSYMEHLSKRSDYSENPF 190 Query: 196 ---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAI 252 L+ ++ + + I+ L + + VS+M +LL + A G GIA + + Sbjct: 191 QSATLMLLNKGNMTRQYIDDYLASCRMEADNLLEVSTM-DLLIEFAKIGMGIACVIRQFV 249 Query: 253 QQEIRSGKLVVLNRDELVIPIQ------AYAYRMNTRMNPVAERFWRELRE 297 ++E+ G L+ E+ +PI +A N N + F R+ Sbjct: 250 EKELAEGSLI-----EVPLPISINKREIGFALPENISQNKAVKEFIHFYRK 295 >UniRef50_A3SMW7 Transcriptional regulator, LysR family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SMW7_9RHOB Length = 292 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 12/250 (4%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L FL + + +AA N+SQPA S RI ALEQ++G++LF R + L+++G + Sbjct: 6 LITFLWVSRLGGVRRAAQEMNISQPAVSGRIAALEQSLGLQLFERAQRGVTLTKKGVLLR 65 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAID 135 + ++ +E A++ + ++I A ++ LP +S + + I Sbjct: 66 DYVEKIVDLVEGIKADVV-PPEAEDSLLRIGVAETIVQLWLPKFLSALYEAYPRIRVEIV 124 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHF 195 VD +V+ ++ + D L+ P + L PV + N +P Sbjct: 125 VDVSVNLRQQLMERSL----DLALMMGPISDHTVDNVDLPPVALTWFRPA---NRPEPDL 177 Query: 196 ---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAI 252 P+++Y+RNS R + R L S F SS+ L+ VA G G+ P Sbjct: 178 RSTPVVSYNRNSRPYRDLRRQLIDRYGHSTQMFPTSSIHAGLEMVA-SGIGVGLFPHQFA 236 Query: 253 QQEIRSGKLV 262 +Q +R G+++ Sbjct: 237 EQLVRQGRIL 246 >UniRef50_A9ISQ5 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9ISQ5_BORPD Length = 321 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 3/146 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+T+ +C +FS AA + ++SQ A S ++ LE +GV L +R + S Sbjct: 5 VTLRQLRAFITVLECGSFSVAADTMHLSQAALSGLVKELESRLGVRLLDRNTRSVSASVV 64 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G F +R +L L+ LA + + + +++AA +LS LLP +I+ + P Sbjct: 65 GTAFEPMVRRVLSDLDEALANVTNLKELRRGLVRVAAPETLSCTLLPELIAGYGERHPGV 124 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFS 153 + + +++ + L G +D F Sbjct: 125 DIRFDDVPIEQVLANLHNGSADIGFG 150 >UniRef50_A7IQF8 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=A7IQF8_XANP2 Length = 375 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 64/113 (56%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + ++ K L FL + + NF +AA N++QP SR+I LEQ +G +LF+R + ++L Sbjct: 58 IGGMDFKRLGYFLAVAEELNFGRAAARLNIAQPPLSRQIAQLEQDLGADLFDRSRSQIRL 117 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 ++ G++ + R +L E E+R + +++IA + + G+LP II Sbjct: 118 TQAGELMLERTREILALAERTEQEVRRVGEGRAGRLRIAFEGTATYGVLPKII 170 >UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCW0_BORBR Length = 305 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 17/255 (6%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N+ + L F+ + R+FSQAA + +V+QPA + I+ LE +GV LF R +L+ Sbjct: 2 NVTFRQLTAFIEVASSRSFSQAAQALHVTQPALTAMIQKLEAQLGVVLFTRTRRGAELTT 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM----PP 125 G+ +++ +L LE + ++RG + + +A SLS +PS+I+++ P Sbjct: 62 TGRELLPELQRILANLEVVIEDVRGAASPRGGTVTLACIPSLSNTWIPSLIARVEQAYPR 121 Query: 126 LFTWAIEAIDVDEAV-DKLREGQSDCIFSFH--DEDLLEAPFDHIRLFESQLFPVCASDE 182 + +A+ + ++ + LR G D ++D LE FD L +L V D Sbjct: 122 IKVILKDAMTENRSIHEMLRTGDIDYGVGSPSVEQDGLE--FDL--LAHDELVAVVPQD- 176 Query: 183 HGEALFNLAQ----PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 H A L + PL+ S S++ L++ + VS ++ + V Sbjct: 177 HPLARRTLVRWSELAESPLIGMSYQSHVRMLVDEAFAANGISKRPKREVSLITTAIGMVR 236 Query: 239 LDGCGIAWLPEYAIQ 253 G G++ LP AI+ Sbjct: 237 -AGLGVSVLPTTAIE 250 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 71/117 (60%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + + +QAA +V+Q A SR+I LEQ +GV LF ++ L L+ Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 G++F S++ +L+ L+ ++E+ D Q +I++ +SL + ++PS++++ L+ Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLY 117 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 20/262 (7%) Query: 15 WLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIF 74 +L + + + R+FS+AA +SQPA S++++A+E+ L R + +E G+IF Sbjct: 5 YLRVYCDIIETRSFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEAGRIF 64 Query: 75 HSQIRHLL---QQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA- 130 + R ++ Q LE +A L S I++A +++ L LP I + + A Sbjct: 65 YEAAREIVERYQALEQQMANL---SQSVSGTIRVATVYTVGLHDLPPYIKKFIQTYPQAR 121 Query: 131 --IEAIDVDEAVDKLREGQSDC-IFSFHDE----DLLEAPFDHIRLFESQLFPVCASDEH 183 +E ++ + +R+ Q D I ++ E ++ P D + + S P+ + + Sbjct: 122 IHLEYSRTNKIYEAVRQNQVDIGIVAYPQEGRQLGVIPLPSDELVVIVSPNHPLARAGKP 181 Query: 184 GEALFNLAQPH-FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 L Q H P + + + + +R L H + E +K+ Sbjct: 182 ----VALQQLHRLPFIAFDPDIPTRKATDRVLNDHG-VDVEIIHEFDNVETIKRSVEAEL 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVL 264 G++ +P Q E+RSG LV L Sbjct: 237 GVSIIPRRCAQWEVRSGSLVAL 258 >UniRef50_A5Z8L5 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8L5_9FIRM Length = 316 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 17/163 (10%) Query: 24 KCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHL-- 81 K ++FS+A+ + +SQPA S I+ LE +GV LF+R ++P++++E GK + + Sbjct: 14 KQKSFSKASKALGISQPALSNYIKKLEDRMGVLLFDRSISPIEITEFGKAYLEYAEDVIS 73 Query: 82 ----LQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLP---SIISQMPPLFTWAIEAI 134 L + S+L +L+ G +IKI + S LP S+ + P T+ + Sbjct: 74 ATDRLNDVMSDLQDLKKG------EIKIGSVVCFSTTYLPGPMSVFHKKYPGITFKLTEE 127 Query: 135 DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV 177 V E ++K G D + D + FD LFE +L V Sbjct: 128 KVPEIMNKCLLGDIDIFLT--DGRIDSELFDKETLFEERLLMV 168 >UniRef50_Q65QK1 LysR protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65QK1_MANSM Length = 288 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 31/262 (11%) Query: 18 DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQ 77 +FL + +FS AA N++ A + I LEQ + +LF+R + L+ +G+++ + Sbjct: 10 EFLMTVEMGSFSAAAERLNLTGSAVGKSISRLEQRLNTQLFHRSTRKITLTREGEVWLAS 69 Query: 78 IRHLLQQLESNLAELRGGSDYAQRKIKI----AAAHSLSLGLLPSIISQMPPLFTWAIEA 133 R ++++LE L S +I+I S L L +I + P L+ + Sbjct: 70 CRRMMEELEQAKLLLSSQSQQIIGEIRIDLPTTYGRSHILPKLLAIQADYPKLY---LNI 126 Query: 134 IDVDEAVDKLREGQSDCIFSFHD-EDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQ 192 D VD + E D F + DL + I F++QL CA+ L Sbjct: 127 SFQDRKVDMIAE-HIDIAVRFGELADLTDIIAKQIDCFQNQL---CATPAFVSKWGKLNH 182 Query: 193 P----HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLK------QVALDGC 242 P HFP + ++ S+ RL+N E ST F ++ + Q L C Sbjct: 183 PDDLTHFPCIVGNQISW--RLMN-------EQGKSTGFPLNVQHQINDGDARLQAVLADC 233 Query: 243 GIAWLPEYAIQQEIRSGKLVVL 264 GIA+LP++ IQ + +GKLV L Sbjct: 234 GIAFLPDWLIQPAVEAGKLVQL 255 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P39376 Uncharacterized HTH-type transcriptional regulat... 428 e-118 UniRef50_B5XW05 Transcriptional regulator, LysR family n=14 Tax=... 293 6e-78 UniRef50_D0S485 LysR family transcriptional regulator n=1 Tax=Ac... 285 2e-75 UniRef50_Q2BGK4 Transcriptional Regulator, LysR family protein n... 270 3e-71 UniRef50_Q6LHK8 Hypothetical transcriptional regulator n=2 Tax=P... 266 5e-70 UniRef50_Q5E4K6 Predicted DNA-binding transcriptional regulator ... 264 2e-69 UniRef50_Q4ZL95 Regulatory protein, LysR:LysR, substrate-binding... 254 2e-66 UniRef50_Q0B264 Transcriptional regulator, LysR family n=8 Tax=B... 253 4e-66 UniRef50_Q394R6 Transcriptional regulator, LysR family n=13 Tax=... 251 2e-65 UniRef50_C4WPU3 Transcriptional regulator, LysR family n=1 Tax=O... 248 2e-64 UniRef50_C4ZM38 Transcriptional regulator, LysR family n=1 Tax=T... 247 3e-64 UniRef50_C5CMH8 Transcriptional regulator, LysR family n=2 Tax=c... 246 5e-64 UniRef50_C5BAX2 Transcriptional regulator, LysR family n=3 Tax=G... 245 2e-63 UniRef50_B9Z6S7 Transcriptional regulator, LysR family n=1 Tax=L... 244 3e-63 UniRef50_Q5LQ28 Transcriptional regulator, LysR family n=1 Tax=R... 242 1e-62 UniRef50_A6X3J9 Transcriptional regulator, LysR family n=2 Tax=O... 242 1e-62 UniRef50_Q5E4P1 Transcriptional regulator n=4 Tax=Vibrionaceae R... 241 2e-62 UniRef50_Q21ST1 Transcriptional regulator, LysR family n=4 Tax=B... 240 7e-62 UniRef50_C6B2M0 Transcriptional regulator, LysR family n=2 Tax=R... 238 2e-61 UniRef50_Q11AL0 Transcriptional regulator, LysR family n=1 Tax=C... 238 3e-61 UniRef50_Q1BZ57 Transcriptional regulator, LysR family n=76 Tax=... 237 3e-61 UniRef50_A9CHQ5 Transcriptional regulator, LysR family n=1 Tax=A... 234 2e-60 UniRef50_Q5LKU8 Transcriptional regulator, LysR family n=6 Tax=R... 233 8e-60 UniRef50_B8IID1 Transcriptional regulator, LysR family n=5 Tax=A... 231 2e-59 UniRef50_B8IQ92 Transcriptional regulator, LysR family n=3 Tax=M... 230 4e-59 UniRef50_Q220G0 Transcriptional regulator, LysR family n=3 Tax=C... 229 8e-59 UniRef50_A3YCU0 Putative uncharacterized protein n=1 Tax=Marinom... 228 1e-58 UniRef50_B2UG98 Transcriptional regulator, LysR family n=4 Tax=B... 228 1e-58 UniRef50_Q21ZS2 Transcriptional regulator, LysR family n=1 Tax=R... 228 2e-58 UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=... 226 8e-58 UniRef50_B8IFG1 Transcriptional regulator, LysR family n=5 Tax=A... 226 8e-58 UniRef50_B5QX35 LysR-family transcriptional regulator n=24 Tax=G... 225 2e-57 UniRef50_A5N491 Transcriptional regulator n=2 Tax=Clostridium kl... 225 2e-57 UniRef50_B9JIP5 Transcriptional regulator protein n=1 Tax=Agroba... 224 3e-57 UniRef50_Q0I520 Transcription regulator, LysR family n=3 Tax=Pas... 224 4e-57 UniRef50_A1TLZ5 Transcriptional regulator, LysR family n=2 Tax=A... 223 5e-57 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 223 5e-57 UniRef50_B7H371 HTH-type transcriptional regulator cbl n=11 Tax=... 223 6e-57 UniRef50_B1JFP7 Transcriptional regulator, LysR family n=4 Tax=P... 222 1e-56 UniRef50_D0ZGF0 Transcriptional regulator n=2 Tax=Edwardsiella R... 221 2e-56 UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=B... 220 4e-56 UniRef50_Q2SL06 Transcriptional regulator n=3 Tax=Oceanospirilla... 220 4e-56 UniRef50_A1TXT6 Transcriptional regulator, LysR family n=3 Tax=M... 220 5e-56 UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=T... 220 5e-56 UniRef50_A8LJG0 Transcriptional regulator n=1 Tax=Dinoroseobacte... 219 9e-56 UniRef50_C6Q178 Transcriptional regulator, LysR family n=1 Tax=C... 219 1e-55 UniRef50_A9EZ85 Transcriptional regulator, LysR family protein n... 218 1e-55 UniRef50_A6GPQ8 Putative transcription regulator protein n=1 Tax... 218 2e-55 UniRef50_Q46VM9 Transcriptional regulator, LysR family n=4 Tax=C... 218 2e-55 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 218 2e-55 UniRef50_B7UYE4 Probable transcriptional regulator n=6 Tax=Pseud... 218 2e-55 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 218 3e-55 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 217 3e-55 UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=D... 216 7e-55 UniRef50_B3DZ70 Transcriptional regulator, LysR/CysB family n=5 ... 215 1e-54 UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=P... 214 3e-54 UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibaci... 214 3e-54 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 214 3e-54 UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=... 214 3e-54 UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=... 213 4e-54 UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=C... 213 5e-54 UniRef50_B9R307 LysR substrate binding domain, putative n=1 Tax=... 213 5e-54 UniRef50_B1YFC0 Transcriptional regulator, LysR family n=3 Tax=B... 213 5e-54 UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=D... 213 8e-54 UniRef50_P96725 Uncharacterized HTH-type transcriptional regulat... 212 2e-53 UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteri... 212 2e-53 UniRef50_Q1QWD8 Transcriptional regulator, LysR family n=1 Tax=C... 211 2e-53 UniRef50_Q12HA4 Transcriptional regulator, LysR family n=1 Tax=P... 211 3e-53 UniRef50_A6UJW6 Transcriptional regulator, LysR family n=4 Tax=R... 211 3e-53 UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=c... 209 6e-53 UniRef50_Q0TQC8 Transcriptional regulator, LysR family n=10 Tax=... 209 7e-53 UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=B... 209 8e-53 UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=M... 209 9e-53 UniRef50_Q8EL24 Transcriptional regulator (LysR family) n=1 Tax=... 209 9e-53 UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n... 209 1e-52 UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=un... 209 1e-52 UniRef50_B7HRA4 Transcriptional regulator, LysR family n=70 Tax=... 209 1e-52 UniRef50_UPI000174499E transcriptional regulatory protein, LysR ... 209 1e-52 UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n... 208 1e-52 UniRef50_Q5WIP7 LysR family transcriptional regulator n=2 Tax=Ba... 208 2e-52 UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Ba... 208 3e-52 UniRef50_C4GDC9 Putative uncharacterized protein n=2 Tax=Bacteri... 207 4e-52 UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=F... 207 4e-52 UniRef50_B6A503 Transcriptional regulator, LysR family n=1 Tax=R... 207 4e-52 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 207 5e-52 UniRef50_A0Q2F6 Transcriptional regulators, LysR family n=16 Tax... 207 5e-52 UniRef50_A7UH62 Putative LysR family regulator n=1 Tax=Desulfoti... 207 5e-52 UniRef50_A6LZH1 Transcriptional regulator, LysR family n=2 Tax=C... 206 5e-52 UniRef50_D2TPN0 LysR-family transcriptional regulator n=3 Tax=Ci... 206 6e-52 UniRef50_C9L6F7 Transcriptional regulatory protein n=2 Tax=Firmi... 206 6e-52 UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostri... 206 6e-52 UniRef50_D0SM30 LysR family transcriptional regulator n=2 Tax=Ac... 206 7e-52 UniRef50_B1ZVT1 Transcriptional regulator, LysR family n=3 Tax=V... 206 8e-52 UniRef50_A9KDX5 Transcriptional regulator, LysR family n=3 Tax=C... 206 9e-52 UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=C... 205 2e-51 UniRef50_C0Z9T7 Transcriptional regulator n=1 Tax=Brevibacillus ... 204 2e-51 UniRef50_B3DV00 RuBisCO operon transcriptional regulator CbbR n=... 204 2e-51 UniRef50_C6B5Y5 Transcriptional regulator, LysR family n=1 Tax=R... 204 3e-51 UniRef50_A9BU84 Transcriptional regulator, LysR family n=1 Tax=D... 204 3e-51 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 204 3e-51 UniRef50_A9BZS3 Transcriptional regulator, LysR family n=2 Tax=C... 204 4e-51 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 204 4e-51 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 203 5e-51 UniRef50_A9KNS0 Transcriptional regulator, LysR family n=2 Tax=C... 203 7e-51 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 203 1e-50 UniRef50_Q2SMQ7 Transcriptional regulator n=1 Tax=Hahella chejue... 202 1e-50 UniRef50_UPI0001C36638 LysR family transcriptional regulator n=1... 202 1e-50 UniRef50_A9KDY0 Transcriptional regulator, LysR family n=3 Tax=C... 202 1e-50 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 202 1e-50 UniRef50_A3Y5Z0 Transcriptional regulator, LysR family protein n... 202 2e-50 UniRef50_A6FPF9 Transcriptional regulator, LysR family protein n... 201 2e-50 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 201 4e-50 UniRef50_B5FDE5 Transcriptional regulator, LysR family n=4 Tax=G... 200 6e-50 UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=C... 199 6e-50 UniRef50_Q2RLB0 Transcriptional regulator, LysR family n=1 Tax=M... 199 7e-50 UniRef50_B3PFN1 Transcriptional regulator, LysR family n=1 Tax=C... 199 9e-50 UniRef50_A1TW95 Transcriptional regulator, LysR family n=8 Tax=C... 199 9e-50 UniRef50_A3Y9W7 Transcriptional regulator, LysR family protein n... 199 9e-50 UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=B... 199 1e-49 UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n... 199 1e-49 UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=B... 198 2e-49 UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter... 198 2e-49 UniRef50_A9I640 Transcriptional regulator, LysR-family n=4 Tax=B... 198 2e-49 UniRef50_C3RIV9 Transcriptional regulator n=2 Tax=Bacteria RepID... 198 2e-49 UniRef50_UPI0001AEC4E8 probable transcriptional regulator n=1 Ta... 198 2e-49 UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=P... 198 2e-49 UniRef50_Q5ZT74 Transcriptional regulator, LysR family n=1 Tax=L... 198 2e-49 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 198 3e-49 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 198 3e-49 UniRef50_A3QF96 Transcriptional regulator, LysR family n=10 Tax=... 197 4e-49 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 197 5e-49 UniRef50_C6C230 Transcriptional regulator, LysR family n=1 Tax=D... 197 5e-49 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 196 5e-49 UniRef50_P39127 HTH-type transcriptional regulator citR n=3 Tax=... 196 5e-49 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 196 6e-49 UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=C... 196 7e-49 UniRef50_A9AUC8 Transcriptional regulator, LysR family n=2 Tax=C... 196 8e-49 UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi... 196 8e-49 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 196 9e-49 UniRef50_A8H0Z4 Transcriptional regulator, LysR family n=6 Tax=G... 196 9e-49 UniRef50_B0P1N2 Putative uncharacterized protein n=1 Tax=Clostri... 196 1e-48 UniRef50_C0BY92 Putative uncharacterized protein n=5 Tax=Firmicu... 195 1e-48 UniRef50_Q7W3G8 LysR family regulatory protein n=2 Tax=Bordetell... 195 2e-48 UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=B... 195 2e-48 UniRef50_C7RAV2 Transcriptional regulator, LysR family n=1 Tax=K... 194 2e-48 UniRef50_Q62XD4 Transcriptional regulator CitR n=3 Tax=Bacillus ... 194 2e-48 UniRef50_B9K5H2 Transcriptional regulator LysR family n=1 Tax=Ag... 194 3e-48 UniRef50_Q2BJY7 Putative transcriptional regulator, LysR family ... 193 5e-48 UniRef50_C1TQZ9 Transcriptional regulator, COG0583 n=1 Tax=Dethi... 193 6e-48 UniRef50_B7RLZ1 Transcriptional regulator, LysR family n=1 Tax=R... 193 7e-48 UniRef50_UPI00017446F7 LysR family transcriptional regulator n=1... 193 7e-48 UniRef50_Q1LFE8 Transcriptional regulator, LysR family n=15 Tax=... 193 8e-48 UniRef50_B7GJV0 Transcriptional regulator (LysR family) n=1 Tax=... 193 8e-48 UniRef50_B9YAR8 Putative uncharacterized protein n=1 Tax=Holdema... 193 9e-48 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 193 9e-48 UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n... 193 1e-47 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 193 1e-47 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 192 1e-47 UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=C... 192 1e-47 UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma... 192 1e-47 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 192 1e-47 UniRef50_C7BI08 Transcriptional regulator n=2 Tax=Gammaproteobac... 192 2e-47 UniRef50_C2FRR6 LysR family transcriptional regulator n=2 Tax=Sp... 192 2e-47 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 191 2e-47 UniRef50_D2P368 Transcription activator of glutamate synthase op... 191 2e-47 UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xen... 191 2e-47 UniRef50_UPI0001B4C1F4 LysR family transcriptional regulator n=1... 191 3e-47 Sequences not found previously or not previously below threshold: UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 222 1e-56 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 214 2e-54 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 211 3e-53 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 210 6e-53 UniRef50_Q5WD37 LysR family transcriptional regulator n=1 Tax=Ba... 209 9e-53 UniRef50_A4G228 Transcriptional regulatory protein, LysR family ... 208 2e-52 UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=L... 208 3e-52 UniRef50_C8WTC6 Transcriptional regulator, LysR family n=1 Tax=A... 208 3e-52 UniRef50_C8W3M6 Transcriptional regulator, LysR family n=1 Tax=D... 207 3e-52 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 207 3e-52 UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=F... 207 4e-52 UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostri... 207 4e-52 UniRef50_C0Z947 Transcriptional regulator n=1 Tax=Brevibacillus ... 207 5e-52 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 206 9e-52 UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clos... 205 2e-51 UniRef50_B2A0Q8 Transcriptional regulator, LysR family n=1 Tax=N... 204 4e-51 UniRef50_Q3AEF0 Transcriptional regulator, LysR family n=1 Tax=C... 203 5e-51 UniRef50_B6ITN2 Transcriptional regulator, LysR family protein n... 203 8e-51 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 202 1e-50 UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacte... 202 1e-50 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 202 1e-50 UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=D... 202 2e-50 UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus ... 201 2e-50 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 201 2e-50 UniRef50_Q1DCG4 Transcriptional regulator, LysR family n=2 Tax=C... 201 2e-50 UniRef50_B5YKH0 Transcriptional regulator n=1 Tax=Thermodesulfov... 201 2e-50 UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=B... 201 3e-50 UniRef50_A9KJB0 Transcriptional regulator, LysR family n=4 Tax=C... 201 3e-50 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 200 4e-50 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 200 4e-50 UniRef50_C4LEC5 Transcriptional regulator, LysR family n=18 Tax=... 200 5e-50 UniRef50_C3AM26 YwqM (Probable transcriptional regulator YwqM) n... 199 7e-50 UniRef50_A8MEQ1 Transcriptional regulator, LysR family n=5 Tax=B... 199 1e-49 UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=A... 199 1e-49 UniRef50_C8N722 LysR family transcriptional regulator n=4 Tax=Pr... 199 1e-49 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 199 1e-49 UniRef50_C8P2K3 Putative uncharacterized protein n=1 Tax=Erysipe... 198 2e-49 UniRef50_B7JB31 Rubisco operon transcriptional regulator n=5 Tax... 198 2e-49 UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=... 198 2e-49 UniRef50_B5HHH0 YwqM n=1 Tax=Streptomyces pristinaespiralis ATCC... 198 3e-49 UniRef50_Q11EY5 Transcriptional regulator, LysR family n=1 Tax=C... 198 3e-49 UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=... 198 3e-49 UniRef50_UPI000178A79D transcriptional regulator, LysR family n=... 197 3e-49 UniRef50_UPI0001C34DF6 LysR family transcriptional regulator n=1... 197 4e-49 UniRef50_B2T1K1 Transcriptional regulator, LysR family n=63 Tax=... 197 4e-49 UniRef50_A5N2N1 Predicted transcriptional regulator n=3 Tax=Clos... 197 4e-49 UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=A... 197 4e-49 UniRef50_Q2WAU7 Transcriptional regulator n=7 Tax=Proteobacteria... 197 5e-49 UniRef50_A8RTH6 Putative uncharacterized protein n=2 Tax=Clostri... 196 6e-49 UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=P... 196 6e-49 UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=B... 196 8e-49 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 196 9e-49 UniRef50_D2M0Y8 Transcriptional regulator, LysR family n=1 Tax=B... 196 1e-48 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 196 1e-48 UniRef50_A3YG12 Putative transcription regulator protein n=1 Tax... 196 1e-48 UniRef50_B9ITM1 Transcriptional regulator, LysR family n=71 Tax=... 196 1e-48 UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 195 1e-48 UniRef50_C6QF64 Transcriptional regulator, LysR family n=1 Tax=H... 195 2e-48 UniRef50_C8WRL7 Transcriptional regulator, LysR family n=2 Tax=A... 195 2e-48 UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n... 195 2e-48 UniRef50_C3BMM7 Putative uncharacterized protein n=3 Tax=Bacillu... 195 2e-48 UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=D... 195 2e-48 UniRef50_C6WQ50 Transcriptional regulator, LysR family n=1 Tax=A... 194 2e-48 UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum ... 194 2e-48 UniRef50_P30864 Uncharacterized HTH-type transcriptional regulat... 194 2e-48 UniRef50_Q06610 RuBisCO operon transcriptional regulator n=4 Tax... 194 3e-48 UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=C... 194 4e-48 UniRef50_B8FZV1 Transcriptional regulator, LysR family n=2 Tax=D... 194 4e-48 UniRef50_A0NTX9 LysR family transcriptional regulatory protein n... 193 5e-48 UniRef50_P73778 Transcriptional regulator n=5 Tax=Cyanobacteria ... 193 5e-48 UniRef50_A8RJM4 Putative uncharacterized protein n=3 Tax=Clostri... 193 6e-48 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 193 6e-48 UniRef50_Q11LB7 Transcriptional regulator, LysR family n=1 Tax=C... 193 9e-48 UniRef50_C0D9J1 Putative uncharacterized protein n=1 Tax=Clostri... 192 1e-47 UniRef50_C0QLD9 LysR n=1 Tax=Desulfobacterium autotrophicum HRM2... 192 1e-47 UniRef50_B3E2N5 Transcriptional regulator, LysR family n=1 Tax=G... 192 1e-47 UniRef50_Q8TVB0 Transcriptional regulator of the LysR family n=1... 192 1e-47 UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=P... 192 1e-47 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 192 2e-47 UniRef50_C1SP16 Transcriptional regulator, COG0583 n=1 Tax=Denit... 192 2e-47 UniRef50_Q47YE9 Transcriptional regulator, LysR family n=1 Tax=C... 191 2e-47 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 191 3e-47 UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=R... 191 3e-47 >UniRef50_P39376 Uncharacterized HTH-type transcriptional regulator yjiE n=94 Tax=Gammaproteobacteria RepID=YJIE_ECOLI Length = 303 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 303/303 (100%), Positives = 303/303 (100%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR Sbjct: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 Query: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII Sbjct: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 Query: 121 SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS Sbjct: 121 SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD Sbjct: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI Sbjct: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 Query: 301 VLS 303 VLS Sbjct: 301 VLS 303 >UniRef50_B5XW05 Transcriptional regulator, LysR family n=14 Tax=Gammaproteobacteria RepID=B5XW05_KLEP3 Length = 302 Score = 293 bits (750), Expect = 6e-78, Method: Composition-based stats. Identities = 133/296 (44%), Positives = 208/296 (70%), Gaps = 4/296 (1%) Query: 3 DCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQV 62 G++L N+E KWLYD + LE+ R+F+ AA +RN+SQ +FSRRI++LE ++G +F+R Sbjct: 2 RTGSVLANLEVKWLYDVIALEESRSFTLAAKARNISQSSFSRRIQSLEASLGFSIFDRSA 61 Query: 63 TPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ 122 PLQL+ +GKIF R++L ++ ++ ++G ++ Q KI+I AA SLS+ LLP II+ Sbjct: 62 NPLQLTNRGKIFVGYARNMLDDMDFQISRIKGLNNTTQ-KIRIDAAPSLSVLLLPEIIAG 120 Query: 123 M--PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 T+ +E+I+V++AV L+EG+SD I SF++E+L+ PF + ++F+S L V Sbjct: 121 YTDRKNKTFHVESINVNDAVFNLKEGKSDFILSFYNEELMNYPFINHKIFDSYLHLVSPC 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 DEHG LF+L + PL+ Y+ +SYMGR +N+ + R E++FS FVSSMSELLK++ L+ Sbjct: 181 DEHGRPLFHLHRGVLPLMKYANDSYMGRQVNQVIDRTPEITFSLTFVSSMSELLKRMILN 240 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 G G+ WLP+Y+IQ+E+ G+L +L+ D L +PI A+ YR +R+N AERFW+ ++ Sbjct: 241 GDGVGWLPQYSIQRELDEGRLTILD-DRLSLPIGAWLYRSGSRLNQAAERFWQHIK 295 >UniRef50_D0S485 LysR family transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S485_ACICA Length = 298 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 121/299 (40%), Positives = 192/299 (64%), Gaps = 3/299 (1%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 ++ NIE KWLYD + LEK RNF+ A+ RN+SQ + SRRI+ALE ++G E+F+R+ +PLQ Sbjct: 1 MIQNIELKWLYDLIVLEKYRNFTVASDIRNISQSSLSRRIQALENSLGFEVFDRETSPLQ 60 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--P 124 L+EQGK+F R+LL E N+ +++G ++ + K+ IA+AHSL+ + P I+ + Sbjct: 61 LTEQGKLFILHARNLLDDFEFNIDQIKG-DNHVRSKVTIASAHSLAGYIFPKILGNLKNY 119 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + +EAI+V+E VD L+ GQ D I SF+D+DL+ F +LF ++L+ V A + G Sbjct: 120 QEKIFHVEAINVNETVDSLKNGQCDFIASFYDDDLMNPQFLCHKLFSAKLYLVTAPNHLG 179 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 F+L PL+NY+ +SYMG+ +N+ L H F T FVSSMS LLK + G G+ Sbjct: 180 RPKFSLEDTSIPLMNYTDDSYMGKKVNKFLQDHHSDKFETNFVSSMSLLLKDMIKGGYGV 239 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVLS 303 WLP+Y+IQ E++ +L+++ E V+ + Y YR + R+N +E W ++ ++ ++ Sbjct: 240 GWLPDYSIQDELKQNQLMIMPIKESVLSVDIYLYRSSARLNATSEGLWNFVKAIDWTIA 298 >UniRef50_Q2BGK4 Transcriptional Regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGK4_9GAMM Length = 308 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 103/295 (34%), Positives = 170/295 (57%), Gaps = 8/295 (2%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 NIETKWL DFL+L K +NFS++A R+++QPAFSRRI++LE A+G EL +R+ P+ L+ Sbjct: 1 MNIETKWLEDFLSLAKTQNFSRSAKERHLTQPAFSRRIQSLESAVGCELIDRRSVPVTLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 ++G +F ++L+ QLES ++ ++ + + I A +H+LSL + P I + P Sbjct: 61 DEGLLFKETAQNLILQLESCISHIQSLAGKSHSVIDFAVSHALSLSMFPGFIQSLQSAIP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEA-PFDHIRLFESQLFPVCASDEHG 184 T + DE L+ G D +F+F D L + F + L + +L PVC++D+ G Sbjct: 121 GITVRQIVANADECSQALKNGICDFLFAFEDSSLNDELKFASLSLEQEKLIPVCSTDKSG 180 Query: 185 EALFNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSELLKQVALD 240 LF+L +P L+Y N Y+GR +++ + R + F S M++ LK +AL Sbjct: 181 NPLFDLDDADSFSYPFLSYPDNIYLGRSVSQLIKRPPRVIELQKAFESPMADSLKGMALQ 240 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G GIAW+P +++ +E++ G LV+ D +P+ YR + +E+ W+ L Sbjct: 241 GTGIAWVPAFSVTEELKQGSLVICGGDAWQVPLNICVYRKQRVLCGESEQLWQLL 295 >UniRef50_Q6LHK8 Hypothetical transcriptional regulator n=2 Tax=Photobacterium profundum RepID=Q6LHK8_PHOPR Length = 299 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 114/295 (38%), Positives = 184/295 (62%), Gaps = 8/295 (2%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + NIETKWL DFL L + +NFS AA RNV+QPAFSRRI+ LE +G+ L +R +P++L Sbjct: 1 MKNIETKWLQDFLILAELQNFSHAATVRNVTQPAFSRRIKLLEAELGLVLIDRSKSPIEL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ-MPPL 126 + GK F + + ++ Q++ ++ L G S + ++++ AHS+S+ LLP + S P Sbjct: 61 TLCGKQFKTTAQSIIHQIDEEVSRLAGCSFLGRHTVRLSTAHSISISLLPKLHSSLFNPK 120 Query: 127 FTWAIEAI--DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + + +VD+AV+ L +G+ D +FSF+++ L AP+ I L S L+ V A DE G Sbjct: 121 LNTNLSVVANEVDDAVELLIDGKCDFLFSFYEDRLQVAPYRSIYLGRSFLYCVSAVDESG 180 Query: 185 EALFNLA-QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 L++L P L+Y+ SYMGR ++R +S+L+ +T SSM++ +K + L G G Sbjct: 181 NTLYDLENNDDVPCLDYTPESYMGRALHRA---NSKLTSNTVCSSSMTDFIKALVLQGKG 237 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 I+WLP+YAI++E+ SG+L +L E +P+ Y YR ++++ E W EL ++ Sbjct: 238 ISWLPDYAIKEELASGQLKILTERE-PVPLDLYVYRYYSKLHSSCEAMWNELSQV 291 >UniRef50_Q5E4K6 Predicted DNA-binding transcriptional regulator n=6 Tax=Vibrionaceae RepID=Q5E4K6_VIBF1 Length = 293 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 117/296 (39%), Positives = 180/296 (60%), Gaps = 7/296 (2%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 N+E+KWL DFL L K +NFSQAA RNV+QPAFSRRIR LE +G EL +R+ P++L+ Sbjct: 1 MNVESKWLEDFLVLAKVKNFSQAAELRNVTQPAFSRRIRLLEDTVGAELVDRKSKPIELT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP--- 125 GK+F R L+ Q+E+ ++++ S +++AAAHSL+ L+P + Sbjct: 61 PSGKLFRITARTLVNQIEAGISQISDLSQLGGNVVQVAAAHSLATSLIPKMQQAFDEGDY 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 ++EAIDVDEA +LREG D + +F D+ L P+ + +++L PV A DE G+ Sbjct: 121 KPILSVEAIDVDEATKELREGACDILLAFDDDILRLPPYQSQLIAKTELLPVSACDEMGK 180 Query: 186 ALFN-LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +++ ++Q P L YS SYMGR + + ++ + F SSM+++LK + L+ GI Sbjct: 181 PIYDFISQGAVPWLTYSSTSYMGRQVEIIREQ---VALTPIFSSSMTDMLKILVLNKQGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 AWLP Y+IQ+E+ K+ ++ L +PI+ YAYR R++P E+ W L L+ Sbjct: 238 AWLPAYSIQEELAQKKVAIIGEQSLRLPIEYYAYRYQARLHPAGEKVWSILCNLDT 293 >UniRef50_Q4ZL95 Regulatory protein, LysR:LysR, substrate-binding n=21 Tax=Gammaproteobacteria RepID=Q4ZL95_PSEU2 Length = 315 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 170/296 (57%), Gaps = 9/296 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 L N+E+KWL DF L R+FSQAA R V+QPAFSRRIR+LE A+G+ L NR TP++L Sbjct: 16 LMNLESKWLEDFSALAATRSFSQAAERRFVTQPAFSRRIRSLESALGLTLVNRSRTPIEL 75 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP-- 125 + G++F R +++QL + L +++AAAHSL+LG P I+Q+ Sbjct: 76 TAAGQLFLVTARTVVEQLGEVVRHLHHLEGGQGEVMQVAAAHSLALGFFPRWIAQLRNEG 135 Query: 126 -LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCAS 180 + A +V +AV LREG D + +F+D D + F + L +++ PVCA+ Sbjct: 136 LNIATRLVATNVGDAVHALREGGCDLMLAFYDPDAALQMDAEIFPSLHLGHTEMLPVCAA 195 Query: 181 DEHGEALFNLAQP-HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 D G LF++ PLL YS +++GR +N L R L F+T + ++M++ LK +AL Sbjct: 196 DAEGRPLFDMEGEGSVPLLAYSTGAFLGRSVN-LLLRQRNLRFTTVYETAMADSLKSMAL 254 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 +G GIAW+P+ +++ E+ G+LVV + +P++ YR WR+L Sbjct: 255 EGLGIAWVPQLSVRAELARGELVVCGGPQWHVPLEIRLYRCALVRKANVRLLWRKL 310 >UniRef50_Q0B264 Transcriptional regulator, LysR family n=8 Tax=Burkholderia RepID=Q0B264_BURCM Length = 321 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 11/298 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KW+ DFL L + ++FS+AA RNV+Q FSRRI++LEQ IG EL +R P L+ Sbjct: 18 MEIKWIEDFLALAQYQSFSRAAEFRNVTQSGFSRRIQSLEQWIGAELIDRSSFPPVLTPA 77 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 G++F +L +L A +R A + ++IAA H+++L LP + + P F Sbjct: 78 GRLFRETAEDVLSRLFDTRAIIRTEQRIAGKSLQIAAGHTIALSFLPGWLKALAPHFGEV 137 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL----EAPFDHIRLFESQLFPVCASDEH 183 + +V +++ L G + +F++H +L A + H+ + L P C + Sbjct: 138 RARVIPTNVHDSILMLVNGNCELMFAYHHPELPLHLDPAKYAHLTVGLDTLMPACRPNRR 197 Query: 184 GEALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSSMSELLKQVAL 239 F L Q PL++Y+ SY GR + L R + + S M+E+LK++ + Sbjct: 198 SAPAFRLPGTKQTPLPLISYTETSYFGRCLALLLGRAPDTPALQLHYESDMAEVLKKLVM 257 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 +G GIAWLP AI E+ +G+LV + ++ YR + + + W+ LRE Sbjct: 258 EGEGIAWLPRSAIAAELAAGELVPAGPAAWNLEVELRVYRDVSNRSEFLDTLWQHLRE 315 >UniRef50_Q394R6 Transcriptional regulator, LysR family n=13 Tax=Burkholderia RepID=Q394R6_BURS3 Length = 332 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 148/298 (49%), Gaps = 13/298 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DFL+L ++FS+AA +R+++Q AFSRRI ALE + +L +R + P+ L+ Sbjct: 1 MEAKWLEDFLSLADTKSFSRAARNRHLTQSAFSRRIAALETWMDAKLVDRSINPITLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQ--RKIKIAAAHSLSLGLLPSIISQMP---P 125 G++F +L+ + + + G +A + ++ A AH+L L P + Q+ Sbjct: 61 GQMFRGLAADILRSMYAARNLVNGYDQFAASDQVVRFAVAHTLVFTLFPEWLKQLNGEVG 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL----EAPFDHIRLFESQLFPVCASD 181 T + A++V E V +L EG+ D + +H L F + L ++ PV D Sbjct: 121 HVTARVNAVNVPEGVQQLVEGECDLLLGYHHPQLPIVLDPNHFPFVSLGVERILPVSTPD 180 Query: 182 EHGEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSSMSELLKQV 237 G+ +F L PLL YS +++G ++ L +E F + MSE LK + Sbjct: 181 ARGKPVFQLPGTPDAPLPLLAYSSGAFLGNIVEMLLLNATEPYVLHRCFETHMSEALKGM 240 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 + G GI WLPE + +E+ G LV + V ++ YR + AE+ W + Sbjct: 241 VVAGHGIGWLPESCVAKELAEGTLVCAGSGDWVTELEIRLYRSARKRGLAAEQLWTYI 298 >UniRef50_C4WPU3 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPU3_9RHIZ Length = 323 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 95/299 (31%), Positives = 159/299 (53%), Gaps = 12/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL DFL + RNFS AA SRN+SQPAFSRRIR+LE +G +L +R P+ L+ Sbjct: 9 MELAWLEDFLEIVATRNFSTAAASRNISQPAFSRRIRSLESWVGADLLDRSTYPVHLTSA 68 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII--SQMPPL-F 127 G +F + + L++ + + + + + AA H+L++ P+ I S P Sbjct: 69 GNMFVPRCQELVRDMYRLRTDCHNVAGANSQLLTFAALHTLAIYFFPNWISGSGFPSSPV 128 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 ++ D E ++ L G+ + ++ D L PF+ +++ + +L V +D Sbjct: 129 RCSMHTGDFLECIEHLSSGKCNFAITYDHPDGPPVLEAGPFESLQIGKDRLILVSGTDAA 188 Query: 184 GEALFNLAQ---PHFPLLNYSRN-SYMGRLINRTLTRHSE-LSFSTFFVSSMSELLKQVA 238 G+ L++L P L+YS N Y+G+LI+ +R L+ ST + SS++E LKQ+A Sbjct: 189 GKPLYDLDTVEGERIPYLSYSWNDGYLGKLISLIQSRWRRPLNLSTVYQSSLAEGLKQMA 248 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 + G GIAWLP+ +Q+ I +L + ++ + I+ +R + AE FW+ L E Sbjct: 249 IAGQGIAWLPQICVQKSISQNELTQIGGQQMSLEIEIRIFRRAGAKDRDAEAFWKYLAE 307 >UniRef50_C4ZM38 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM38_THASP Length = 301 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 94/296 (31%), Positives = 148/296 (50%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DFL+L +FS++A R+VSQPAFSRRIRALE +GV L +R P +L+E Sbjct: 1 MELKWLEDFLSLADSGSFSRSAEQRHVSQPAFSRRIRALEAWLGVALVDRSTFPTRLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 G+ F L+ +L + A +RG A + A H+L+ P+ + ++ F Sbjct: 61 GEAFKGPAADLIHRLHAARALVRGHQTTAGDALVFAVPHTLAFAFFPTWLGRLKAEFGEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCA---S 180 + A +V + V L EG D + +H L A F+ I+L ++ P + Sbjct: 121 PTRLIAGNVHDVVTMLVEGGCDLLLCYHHPTHPVWLDPARFEGIQLAVERVRPYLPRRLA 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSELLKQVAL 239 G L A+ P L Y N+Y+ R+++ L R + + + S M+E LK + L Sbjct: 181 RSAGWQLPGSAEAPIPFLRYGPNTYLRRMVDTILDRAAHPAHLALQYESDMAESLKAMLL 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G G+A+LP A+ +E+ G++VV E + ++ YR P R W+ L Sbjct: 241 AGHGLAFLPASAVAREVERGEVVVAGGPEWSLEMEVRLYRDRANTKPELLRLWQHL 296 >UniRef50_C5CMH8 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=C5CMH8_VARPS Length = 329 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 97/294 (32%), Positives = 158/294 (53%), Gaps = 14/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ETKWL DF++L + R+FS++A R+V+QPAFSRRI+ALE G +L +R P +L+ Sbjct: 1 METKWLEDFISLAETRSFSRSAQLRHVTQPAFSRRIQALEGWAGTDLVDRSSYPTRLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 G+ +SQ +LQ L+S A LRG S Q I+IA H+L+ PS ++ + F Sbjct: 61 GQTLYSQAIEMLQSLQSTRAMLRGHSAAGQDVIEIAVPHTLAFTFFPSWVTSLREHFGPI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 + A++V +AV +L EG D + ++H L ++ + L E + P +D Sbjct: 121 KSRLIALNVHDAVLRLVEGSCDLLIAYHHPSQPLQLDANKYEMVSLGEETVAPWVKADAD 180 Query: 184 GEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMSELLKQVAL 239 G F L P L Y+ +Y+GR++++ L + + + M+E LK +AL Sbjct: 181 GAPRFRLPGRPGQPLPYLGYAPGAYLGRVVDQLLKESGTAIHLDRVYETDMAEGLKVMAL 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELV---IPIQAYAYRMNTRMNPVAER 290 +G GIA+LP+ A+++EI++ KLV E+ ++ AYR + Sbjct: 241 EGHGIAFLPQSAVRKEIKARKLVSALPPEIDSLEATMEIRAYRERPSAPAPVKA 294 >UniRef50_C5BAX2 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=C5BAX2_EDWI9 Length = 306 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 5/289 (1%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL DFLTL + RNFS+AA SR+++QPAF R IRALE+++G +L +R TP+ L+ Sbjct: 1 MEIGWLEDFLTLAELRNFSRAAASRHITQPAFGRHIRALEESVGQQLVDRSTTPVTLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMPPL 126 G F + Q L + G ++ +A HSLS L +I + P Sbjct: 61 GYQFRLLAHAMTNQWHEGLNNINGRPQALLHPVRFSAPHSLSSPFLLDLIAAASADDPAP 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 + ++ + VD AV+ L EG SD + +F LL+ PFD++ L L VCA D G Sbjct: 121 LPFGVDILRVDFAVEALMEGASDFLLAFDTHALLQPPFDNLLLGRGDLLLVCAPDPDGRP 180 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 F + P+L Y+ +SY R++ R L F +S+ +L +Q+AL G G+ W Sbjct: 181 RFQPGEQPVPVLRYTPDSYSARMVER-LMPQYPFPARPLFEASLCDLHRQMALRGHGLTW 239 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 L + I E+ G+LV ++R +P Q YR R++ AE FW+ L Sbjct: 240 LADCQIGAELAEGRLVAVDRQRWCVPYQIRLYRNRARLHQRAEAFWQRL 288 >UniRef50_B9Z6S7 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6S7_9NEIS Length = 307 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 12/303 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + +W+ D L L +NFS+AA +R+++Q A SRRIR+LE+ +G EL +R PL+L++ Sbjct: 1 MHLRWIGDLLALADTKNFSRAAEARHITQSALSRRIRSLEEWVGAELVHRGSYPLELTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F Q R L+ L A++R + + I++ A H+LS+ LP + Q F Sbjct: 61 GQLFCEQGREALRLLLEARADIRQETRMPGKAIQVRAGHTLSMTFLPKWMKQFQRRHGHF 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 + A +V +AV L EG D +F +H L A FD++ L + PV A Sbjct: 121 NARVVAENVLDAVMALSEGSCDLMFCYHHPRAPILLDPAKFDYLTLGQEAFIPVSAVSAS 180 Query: 184 GEALFNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSELSF-STFFVSSMSELLKQVAL 239 G+ F+L P L Y+ +++GR++ L + F + + M+ LL +A Sbjct: 181 GKPAFSLPGRKNIPIPYLAYTSTTFLGRVVEVILKQAPTPYFLELCYEADMAMLLMNMAK 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 +G G+AWLPE ++ + ++ G LV +E ++ +YR N + WR L E+E Sbjct: 241 EGYGVAWLPESSVAEALQQGALVKAGGEEWSTQLEIRSYRAKQNTNATLQDLWRSL-EME 299 Query: 300 IVL 302 V+ Sbjct: 300 SVV 302 >UniRef50_Q5LQ28 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LQ28_SILPO Length = 297 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 9/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL DF+ L F++AA +RN+SQ AF+RRI+ LE +G LF+R V P+ L++ Sbjct: 1 MELDWLEDFVALSSAGVFAKAADARNISQSAFTRRIKNLEYWVGTPLFDRSVHPVTLTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL---F 127 G+ F ++ L + AE RG + + AA H+L++ P ++++ Sbjct: 61 GESFRPVALDMINTLNTARAEARGLARREDAVLDFAALHTLAISYFPRWLNRISGAIGPI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLE----APFDHIRLFESQLFPVCASDEH 183 + A + V+ + G SD + +H + A + IR+ E ++ V Sbjct: 121 RTRVVAENFSGCVEAILSGSSDFMLCYHHHTVPMIADDARYPSIRIAEDRMIAVSCPGLD 180 Query: 184 GEALFNLAQPH-FPLLNYSRNSYMGRLINRTLTRHSELSF-STFFVSSMSELLKQVALDG 241 G+ F L PLL Y+R+S++G++ N+ + R + + +S+ E LK ++G Sbjct: 181 GQPRFTLDGTDTIPLLCYTRDSFLGKMTNQIIDRAGLRARCDFLYENSVGEALKSACVEG 240 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 GIAWLP A+++E+ G+L+ ++ + PI YR R ERFW Sbjct: 241 LGIAWLPMAAVERELSEGRLIRVSTEAAENPISIRLYRSMERSRREVERFWS 292 >UniRef50_A6X3J9 Transcriptional regulator, LysR family n=2 Tax=Ochrobactrum RepID=A6X3J9_OCHA4 Length = 313 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 12/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DF++L + R++S+AA RN++Q A S+RI+ LE +G+ L +R P+ L++ Sbjct: 1 MELKWLEDFVSLAEHRSYSRAAGDRNITQSALSKRIKQLEDWVGLPLIDRSSNPICLTKA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP-LFTW 129 G+ F + + L+ L S + G I A ++LSL P ++Q+ ++ Sbjct: 61 GECFLPRAQDALEMLLSARKSVSDGYSATWEIISFATLNTLSLTFFPHWMAQIEASGASF 120 Query: 130 AIEAIDVDEA----VDKLREGQSDCIFSFHDEDLLE----APFDHIRLFESQLFPVCASD 181 D + + L G D ++ + + + + L ++ PV A Sbjct: 121 RARFADPHSSFVGNISTLVSGHCDFFLTYAHPAVPQMDDLGGYPFLALGTERVIPVSAPA 180 Query: 182 EHGEALFNLAQPHFP--LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 +G+AL +L + P L+Y NS+ + +H +T + + MS LK +A+ Sbjct: 181 PNGQALHSLKEKSLPIDFLSYRGNSFFSLALPWLFEKHG-FELNTVYENGMSVALKAMAV 239 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 G G+AW+PE + E++ G LV + I+ YR N AE FWR +L Sbjct: 240 SGHGVAWIPESLVDDELKRGVLVRAGETNTDLLIEIRVYRTPQFRNKQAELFWRRASQL 298 >UniRef50_Q5E4P1 Transcriptional regulator n=4 Tax=Vibrionaceae RepID=Q5E4P1_VIBF1 Length = 299 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 91/300 (30%), Positives = 157/300 (52%), Gaps = 16/300 (5%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 E KWL DF++L + NFS AA SR V+Q AFSRRI+ALE +GV LF+R P+ L+E G Sbjct: 3 EFKWLEDFMSLIELGNFSAAAKSRYVTQSAFSRRIQALELWVGVPLFDRSSYPIGLTEHG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAI 131 F +LL Q++ + S ++I HS ++ LLP++++Q + Sbjct: 63 NKFVPYAENLLNQIKVTKEDFSLASLKTDNTVRIVCLHSFAINLLPNLLAQFNNQLSHLN 122 Query: 132 EAID-----VDEAVDKLREGQSDCIFSF-----HDEDLLEAPFDHIRLFESQLFPVCASD 181 +I+ +D L + SD +F++ LE + LF+ ++ PV + D Sbjct: 123 ISINPSVQGIDNHFQTLLDDSSDLLFTYNMIGMRPSISLENKLEKHILFKEKIIPVISPD 182 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 P +PLL+YS ++++ +++N+ LT+ + FS F +++SE L ++A++G Sbjct: 183 --LLKNHEDNTP-WPLLSYSEHTFLYKVVNQ-LTKSISVPFSQVFETTLSESLIEMAING 238 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRD--ELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 G+AW+P +A+++E+ G LV + + I + Y P +F E+ L+ Sbjct: 239 IGVAWVPMHAVEKELIKGTLVTAFTEYSDWTIQLDVVCYHSKANSRPAVLQFLEEIHSLK 298 >UniRef50_Q21ST1 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q21ST1_RHOFD Length = 332 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 97/318 (30%), Positives = 162/318 (50%), Gaps = 33/318 (10%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ETKWL DF++L + R+FS++A R+V+QPAFSRRI++LE G +L +R P +L+ Sbjct: 1 METKWLEDFVSLAETRSFSRSAQLRHVTQPAFSRRIQSLETWAGTDLVDRSNYPTRLTPG 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 G+ ++Q +LQ L+S A LRG + Q I+ A H+L+ P+ +S + F Sbjct: 61 GETLYAQSLEVLQALQSTRAMLRGHASAGQDVIEFAVPHTLAFTFFPAWVSALRQQFGPI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 + A++V +AV +L EG D + ++H L ++ + L E + P D Sbjct: 121 KSRLIALNVHDAVMRLVEGSCDLLIAYHHPSQPFQLDADRYEMVSLGEEVVAPYAKPDAD 180 Query: 184 GEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMSELLKQVAL 239 G +F L P L Y+ +Y+G++++ L + + F + + M+E LK +AL Sbjct: 181 GAPMFLLPGRPGQPLPYLGYAPGAYLGQMVDLILKQSGTAIHFDRVYETDMAEGLKAMAL 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKL---VVLNRDELVIPIQAYAYRMN-----------TRMN 285 +G GIA+LP A+++++ + KL V L+ L I ++ YR R Sbjct: 241 EGHGIAFLPFSAVKKDLCARKLVSAVPLDLKGLQITMEVRLYRERPSVKENGKLGGHRSA 300 Query: 286 P--------VAERFWREL 295 P A+ W L Sbjct: 301 PSVERATKSAAQALWDYL 318 >UniRef50_C6B2M0 Transcriptional regulator, LysR family n=2 Tax=Rhizobium RepID=C6B2M0_RHILS Length = 301 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 90/301 (29%), Positives = 149/301 (49%), Gaps = 13/301 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL DF+ L RNFS AA +R+V+QPAFSRRIRALE IG L +R P++L+ Sbjct: 1 MELGWLEDFMELAAVRNFSTAAAARHVTQPAFSRRIRALENWIGAALIDRSSYPVRLTNA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 G+ F R L++++ E R + + +A H+++L + P ++ Q F Sbjct: 61 GETFLESSRELMREIYRVRDECRQQARAGIEVLTFSALHTIALSIFPDLLTSVEQRTGPF 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLFPVCASDEH 183 + A D + V+ L G+ D F + E L F + V +D+ Sbjct: 121 ITRMHATDFYDCVESLALGRCDIAFCYSHEFGPPVLQTGQFSSKVIRIDPFHLVSKADQR 180 Query: 184 GEALFNLAQ----PHFPLLNYSRNSYMGRLINRTL--TRHSELSFSTFFVSSMSELLKQV 237 G + +LA PL+ YS + ++G++ + + + + SF + +SMSE +K++ Sbjct: 181 GNPVIDLATWPGNEDMPLVAYSSDCFLGKVQTQLMLDMQKTGRSFRVTYENSMSESVKRM 240 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 L G GI WLPE + +EI +L +++ + + + A R + ERFW L+ Sbjct: 241 ILAGKGIGWLPESSATREIERNELCIVDARQAEVTLNVLAIRKQGSGSAALERFWSNLQG 300 Query: 298 L 298 L Sbjct: 301 L 301 >UniRef50_Q11AL0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11AL0_MESSB Length = 310 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 9/299 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL DFL L + NFS+AA +R+V+QPAFSRRIRALE +G LF+R + L+ Sbjct: 1 MDLTWLEDFLALAETLNFSKAAATRSVTQPAFSRRIRALENWVGTALFHRTTHQVSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 G+ F S+ +L++ L+ E S ++ AA H+LS P I F Sbjct: 61 GEHFRSEAGNLVRGLQQLRRETAEASRRHVSRLSFAATHALSFTFFPRWIRNEDTGFATE 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLFPVCASDEH 183 + + + ++ + G + L F + + + L P+ A Sbjct: 121 SVTLSSGTMEACGQMMLHGDVQFLLCHDHPASQSRLARPGFSSVVVGDDVLIPLSAPLPS 180 Query: 184 GEALFNLA-QPHFPLLNYSRNSYMGRLINRTLTRHSEL-SFSTFFVSSMSELLKQVALDG 241 G ++L Q L YS S +GR++ +TR + F S ++ L +A G Sbjct: 181 GLPKWSLENQAEARYLAYSDRSALGRIVADWITRCDDAPPLVQVFTSDLATTLMSMACGG 240 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 G+ WLP+ +I +LVV + IP+ YR +R++P+AE W L++LE Sbjct: 241 DGLVWLPKMLAGDQIDRSRLVVAGSNRFFIPVHIRLYRSTSRLSPMAEAVWSRLKKLET 299 >UniRef50_Q1BZ57 Transcriptional regulator, LysR family n=76 Tax=cellular organisms RepID=Q1BZ57_BURCA Length = 359 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 92/311 (29%), Positives = 147/311 (47%), Gaps = 23/311 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DF++L + R+FS++A R+VSQPAFSRRI+ALE + EL +R V P +L++ Sbjct: 39 MELKWLEDFVSLAETRSFSRSAELRHVSQPAFSRRIQALEAWLATELIDRSVYPTRLTQA 98 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP---LF 127 G+IF+ Q +L Q LRG I+ A H+LSL P + ++ Sbjct: 99 GQIFYEQALTMLSQAHEARTLLRGHVGAPVPTIEFAVPHTLSLTYFPRWLERIEAKMGQV 158 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 + A++V +AV L EG D + +H L A +D + L + P A Sbjct: 159 HTRLRALNVHDAVLSLVEGGCDLVMGYHHPSHPVALDPARYDMLILGSEPISPFSAPGRA 218 Query: 184 GEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMSELLKQVAL 239 G L A P L+Y+ N+Y+GR+ + L + + M+E LK +AL Sbjct: 219 GRPRHTLPGAADARVPYLSYTPNAYLGRMTEVIIANAPTRLFLDRVYETDMAEGLKAMAL 278 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNR------DELVIPIQAYAYRM------NTRMNPV 287 G G+A+LP A+ + G+L+ L+R + ++ Y + + Sbjct: 279 AGHGVAFLPHSAVDDAVAGGRLIRLDRSARGGAHPFTLTMEIRLYCDKLALQGDDPRQKL 338 Query: 288 AERFWRELREL 298 W +R+ Sbjct: 339 VRALWDVVRDE 349 >UniRef50_A9CHQ5 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CHQ5_AGRT5 Length = 306 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 95/299 (31%), Positives = 144/299 (48%), Gaps = 13/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DFL L NFS+AA R+V+Q AFSRRI+ LE +G L +R P +L+E Sbjct: 9 LEVKWLEDFLALAGTLNFSKAADERHVTQSAFSRRIKQLEAWVGATLVDRASYPSRLTEA 68 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP----PL 126 G F + L+QL L R +++ A H+LS P + ++ PL Sbjct: 69 GAKFVPVAQETLKQLYHARRTLLQEEGADARTVRLTALHTLSFTFFPDWLKRVNEKAGPL 128 Query: 127 FT-WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLE----APFDHIRLFESQLFPVCASD 181 F+ ++ ++E ++ L +GQSD + ++ ++ F+ L + PV A Sbjct: 129 FSVLRPDSGSMEENLNSLVDGQSDFLLTYAHHEVPMLLDAQLFEFRVLGAENIIPVSAPT 188 Query: 182 EHGEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 + G L L A+ F L+Y + S+ G L+ R L + SMS LK +A Sbjct: 189 QDGAPLHALVENAKKPFAYLDYEKASFFGPLL-RDLLSARLPQYERVHEGSMSVGLKAMA 247 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 + G G+AW+PE ++QE+ SG LV I + YR PV ER W L + Sbjct: 248 MAGWGVAWVPESLMRQELDSGALVRAADPSFDITVDIRLYRSKENRRPVVERIWAVLED 306 >UniRef50_Q5LKU8 Transcriptional regulator, LysR family n=6 Tax=Rhodobacterales RepID=Q5LKU8_SILPO Length = 294 Score = 233 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 140/295 (47%), Gaps = 11/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL DF L + NF++A+ RN++Q AFSRRI++LE +G+ L R P+QL+E Sbjct: 1 MDINWLRDFTCLARTLNFTRASEERNITQSAFSRRIKSLENWLGIPLIKRSTYPVQLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ F + + L LR + A H++S+ L I++ P Sbjct: 61 GQQFLPVAQETIASLTDIRQVLRAQEQGVTAFQRFAVLHTISVNYLTRRIAEFEDLIPNL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLE----APFDHIRLFESQLFPVC---AS 180 + + ++ L +G D + + +D+ F + ++PV A+ Sbjct: 121 RVRVYSDNLRTCCQLLSDGTCDFLLYYRHQDVQPVFEEKQFARKDIGVELMYPVAETGAA 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 G L + P L+Y +S++G ++++T+ + + ++ +++E +K+ L Sbjct: 181 RAGGWDLDGDGRQPIPYLSYDPSSFLGTVVDQTIGTRTP-PLAIRYMDALTEAIKRRVLS 239 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G G+AWLPE I +E+ +G++ ++ + P+ + R++ ++ W L Sbjct: 240 GSGMAWLPESVIAEELAAGRVTIIGGPDWQAPLTLSLFCSRDRLDETGQKVWNAL 294 >UniRef50_B8IID1 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=B8IID1_METNO Length = 330 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 84/303 (27%), Positives = 133/303 (43%), Gaps = 13/303 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL DFL L +FS+AA R ++QPAFSRR+RALE+ +G LF R V P+ L+ Sbjct: 1 MDVAWLEDFLALVDLGHFSRAAEQRCITQPAFSRRVRALEEWVGTSLFTRDVLPVTLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM----PPL 126 G+ F L++L R A ++ A+ +LS+ P+ + + Sbjct: 61 GERFRPVAEETLRRLYQGREAAREAGRMAAATVRFASTQTLSVSFFPNWLKAVESFERVQ 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDE 182 T + A + + G++ + L F +RL L PV A Sbjct: 121 ATVNLTAAHMAACEQMMLRGEAQFLLCHDHPSTTHMLASDQFRSLRLGTDLLLPVSAPRP 180 Query: 183 HGE----ALFNLAQPHFPLLNYSRNSYMGRLINRTLT-RHSELSFSTFFVSSMSELLKQV 237 G AL + PLL Y+ S +GR++ SE S F S ++ +L + Sbjct: 181 DGTGPLFALPGTPKAPLPLLTYTGESGLGRILAGARAVERSEASLKPVFASHLTSVLIAM 240 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 A D G+ W P + ++ G+L+ + IPI+ YR R +P AER W + Sbjct: 241 ARDARGVTWAPMSVVADDLERGRLMRAGGADGDIPIEIRLYRPRARQSPAAERLWSLVAG 300 Query: 298 LEI 300 + Sbjct: 301 RDW 303 >UniRef50_B8IQ92 Transcriptional regulator, LysR family n=3 Tax=Methylobacterium RepID=B8IQ92_METNO Length = 318 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 91/296 (30%), Positives = 134/296 (45%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL DFL L + R FS+AA RNV+QPAFSRRIRALE IG LF R L+ Sbjct: 1 MDLDWLKDFLALAEQRTFSRAAEVRNVTQPAFSRRIRALEDWIGTPLFVRGAQGAVLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP---LF 127 G L + L+ E R + IAA H+LS P+ I + L Sbjct: 61 GAHLQPLAAELARSLDRARRETRAVGAAETATLSIAATHALSFTFFPAWIRRHLRVEVLG 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL----EAPFDHIRLFESQLFPVCASDEH 183 T + + ++ + G+ + D+ F R+ + L PVCA D Sbjct: 121 TLNLISDSLEACEQIMLAGEVHFLLCHTHPDVPLRVDADRFPSRRVGDDLLVPVCAPDAA 180 Query: 184 GE---ALFNLAQPHFPLLNYSRNSYMGRLI-NRTLTRHSELSFSTFFVSSMSELLKQVAL 239 G L LL YS+ S +GR++ R R S + T F S ++ L +A Sbjct: 181 GAPLWPLPGPPGAPTRLLAYSQASGLGRILAAREADRPSGTALETVFTSHLAATLMSMAR 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 +G G+AWLP ++++ G+LV D IP++ +R NP A+ W ++ Sbjct: 241 EGHGLAWLPLTLAEEDLARGRLVRAGPDAFAIPVEITLFRAIGCRNPAADAMWAQV 296 >UniRef50_Q220G0 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q220G0_RHOFD Length = 301 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 90/296 (30%), Positives = 144/296 (48%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + WL DF L NFS+AA R ++QPAFSRRIRALE +GV LF+R P L+E Sbjct: 1 MNLSWLLDFQALATSGNFSRAAADRAMTQPAFSRRIRALETWLGVTLFDRSTHPATLTEV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 G+ F ++ + +L ++ E R + + ++ AA H+LSL LP+ + + Sbjct: 61 GEWFRAEAQTILARVARVPDEARAVAASSSATLRFAATHALSLTFLPAWLRTLETRLAMG 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFS----FHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 + + + + + + +G++ + S L + +++ L PV A + Sbjct: 121 SIQLVSDVLQQCEALMLQGRAQFMLSHAHVLVPGRLDPGSYLSVKVGTDTLIPVAAGNGS 180 Query: 184 GEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSEL-SFSTFFVSSMSELLKQVAL 239 G L A PLL+YS S + R+I E T F + ++ +LK +AL Sbjct: 181 GAPRHCLGANADVRVPLLSYSDESGLARVIGALRGDALEKCGTETVFTAHLAAVLKSMAL 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 DG G+AWLP IQ E++ G+LV + + I + +R P AE FWR + Sbjct: 241 DGRGVAWLPVSLIQDELQDGRLVEAAQPDWRIELDIRLFRNQATAPPAAEAFWRAV 296 >UniRef50_A3YCU0 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YCU0_9GAMM Length = 308 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 13/300 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L DFL+L NF ++ R VSQPAFSRRI+ALE +G EL +R P+Q +E Sbjct: 1 MEIKLLEDFLSLCNSGNFRISSEQRFVSQPAFSRRIKALETWLGAELIDRTSYPVQPTEI 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ F + + +++ ++R + + K+ I+ ++L+ +P I ++ P Sbjct: 61 GREFKTTAQQIVRLAYQARNDIRAQTRGNEEKLCISTLNTLAQFFIPIWIKELNPYIDTE 120 Query: 131 IEAI-----DVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASD 181 ++ VD + L EG D S+ D+ + + + + L L P+ + D Sbjct: 121 FLSVRTDFRSVDAYLSSLDEGIVDFFISYEDKYQFNLIDKEKYPSLLLGRESLVPIVSPD 180 Query: 182 EHGEALFNLA---QPHFPLLNYSRNSYMGRLINRTL-TRHSELSFSTFFVSSMSELLKQV 237 E+G + L+ P L YS ++ + R + L T + L + SS++ LK + Sbjct: 181 ENGNPSWLLSGKNTQPIPYLQYSVSTQLNRYVTHKLETSYKNLKLKPSYESSVTMNLKAM 240 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 AL+G G+AWLP I+ E++ G+L+ + I + +R P ++ W+ L E Sbjct: 241 ALEGYGVAWLPLSIIKDELKDGRLMRADEISEDIQMMIKIFRYGDSTEPRVDKIWQVLVE 300 >UniRef50_B2UG98 Transcriptional regulator, LysR family n=4 Tax=Burkholderiaceae RepID=B2UG98_RALPJ Length = 307 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 13/295 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL DF L K R+FS+AA +RNV+ PAF RRI+ALE+ +G L R P+ L+ Sbjct: 1 MQIKWLEDFKELAKTRSFSRAAENRNVTHPAFGRRIKALEEWVGTALVERSEHPVTLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI---ISQMPPLF 127 G++F + + L LR ++I +L+ +P +++ +F Sbjct: 61 GRLFLDAAANAVDGLNDARLLLREAQLPVA--LRIGTGRTLARTFVPGWYETLARQRGVF 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 ++ E V L +G D + ++ L +DH L L PV A D+ Sbjct: 119 PLSVTTGGTQEGVLALADGTVDLLIAYASPQADALLDPRKYDHCLLGSETLVPVSAPDKR 178 Query: 184 GEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRH-SELSFSTFFVSSMSELLKQVAL 239 G F L A P L ++R + ++++ L + F + E ++++AL Sbjct: 179 GRPRFTLPGSAAAPLPWLAFARGLTLRQMLDSHLAAADRKAHLQPVFQADFYEAVEEMAL 238 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRE 294 G G+AWLP + + +G+L D I + R+ + + + + W+ Sbjct: 239 RGFGMAWLPYRLARPHLNAGELRPAGDDAWHIHVNIRMMRVRSNQSALLDEVWQR 293 >UniRef50_Q21ZS2 Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21ZS2_RHOFD Length = 306 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 13/302 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DFL+L NF+++A R +QPAFSRRIR+LE+ +G L R P+ L+ Sbjct: 1 MEVKWLEDFLSLADTLNFTRSAELRFTTQPAFSRRIRSLEEWLGAPLIERATQPISLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ F + +L++L ++R + I A HSLSL P I + Sbjct: 61 GQKFRAIAEEVLRRLFQVREDVRHLDLASANTIIFTATHSLSLNFFPRWIRTVEERNGVL 120 Query: 131 IEAIDVDE---AVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 +D + V L +G + + L F I + +L PV E Sbjct: 121 FTRLDSNHFEVCVQTLLKGHAHFMLCHAHRSVDLHLPPDGFRSIVVGGDRLLPVSTPHEQ 180 Query: 184 GEALFNL----AQPHFPLLNYSRNSYMGRLINRTL-TRHSELSFSTFFVSSMSELLKQVA 238 G L QP L Y+ S +GR ++ L R ++ FVS ++ +L+ + Sbjct: 181 GGPAHALPGTREQPAH-YLAYAETSAIGRAVDHMLEQRPAKPQLEQVFVSHLAAVLESMV 239 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 DG G+AWLPE I+ ++ +G+LVV + +P++ +R + P +E FW Sbjct: 240 RDGRGLAWLPESQIKDDLSAGRLVVAGDESWTVPVELRLFRPEHSLPPKSEEFWAAAVAC 299 Query: 299 EI 300 E+ Sbjct: 300 EV 301 >UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=Clostridia RepID=B8D275_HALOH Length = 296 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 122/292 (41%), Gaps = 10/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+ + K +N S+AA +SQPA S+ I LE+ + ++LF+R L+L+ Sbjct: 1 MNLRQLKIFVMVCKTKNMSKAAKKLYMSQPAISQTISELEEDLNIKLFDRIKKRLKLTYA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GKI + +L ++ ++ + Q K++I A+ ++ LLP II Sbjct: 61 GKILLRNSKRILNLVDETENIIKDIVNMNQGKLRIGASMTIGTYLLPQIIEGFLNKYNKI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE---HG 184 + D + + + D + + F+ QL+ +C+S H Sbjct: 121 HLPFTIDNTKVIEDMILDNKLDLAL--VEGPIYCKDILVEHFFDDQLYLMCSSKHSWSHK 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + + + S I + +HS + + V + E +K+ + G+ Sbjct: 179 RKINSEELKGEDFIIREKGSGTRETIENIMRKHS-IKYHVTHVFNNIEAIKRAIISNLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL 295 + LPE +++E++ G LV ++ + + Y + + + F + Sbjct: 238 SILPEICVKEELKKGLLVKVDIQGIEFKRKFSIIYHKDKYRSQLFNNFVNHI 289 >UniRef50_B8IFG1 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=B8IFG1_METNO Length = 300 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 18/292 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DF++L + +FS++A R+V+Q AFSRRI+ALE +GV L +R P L+ Sbjct: 1 MELKWLEDFVSLARTGSFSRSAEERHVTQSAFSRRIQALETWLGVSLIDRSTYPTTLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL---F 127 G+ F ++ L + A L+ + +++ + +AA H+L+L P Q+ Sbjct: 61 GREFREMAEEAVRMLHGSRAALQASARPSKQTVAVAALHTLALTFFPRWFRQIEAHTGPL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 + D + + EG D + +FH L A + + + L V Sbjct: 121 GSRLLPDDFHNCIQAVAEGGYDFLLTFHHPSVPILLDPAQYPYCVVGADSLVAV------ 174 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGR--LINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 A PLL+Y++NS++GR ++ + S ++M+E LK +AL+G Sbjct: 175 RSAARTDGSASLPLLSYAQNSFLGRVAIVAQAQAGEPPAGISHTNENAMAEALKFMALEG 234 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 G+AWLP + +E+ G L+ + P++ YR W+ Sbjct: 235 HGLAWLPRSLVVRELAEGSLIAEGEE---TPLEVRLYRNAGHRRTAVLAVWQ 283 >UniRef50_B5QX35 LysR-family transcriptional regulator n=24 Tax=Gammaproteobacteria RepID=B5QX35_SALEP Length = 327 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 90/304 (29%), Positives = 154/304 (50%), Gaps = 12/304 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 H++E WL D L L++ NFS+A+ SR V+QPAFSRRI++LE+ +G LF R + L+ Sbjct: 24 HHLELTWLEDCLALKETLNFSKASASRYVTQPAFSRRIQSLEEWVGTPLFERSKRGVTLT 83 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ---MPP 125 + G++F Q+ L+ L + ++ + Q + +A H+LS +P ++ Q + Sbjct: 84 KAGEVFTDQLPELIHSLYTLKSDTLEAAGNKQPSLVFSATHALSFSFVPHLLKQSDKIAK 143 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLFPVCASD 181 ++ + + ++ +R+G S + H +L + F IRL L P D Sbjct: 144 FGSFRLLSDSLNACEKMMRQGDSQFLLCHHHPHMHLNLNKNNFMSIRLGFDTLIPFSKPD 203 Query: 182 -EHGEALFNLAQP-HFPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSSMSELLKQVA 238 E + L+N+ FP L++S S +GR+I T + + + FV+ ++ L + Sbjct: 204 SETLKPLWNINNKIQFPYLSFSSQSGLGRIIANTASINRITHNINVAFVADLAATLLAMV 263 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDE--LVIPIQAYAYRMNTRMNPVAERFWRELR 296 G G+AW+P+ +Q+I + +V E L +PI+ YR RM P AE W Sbjct: 264 RSGDGVAWIPQSLARQDIEAKTIVTAAEKESNLWVPIEIRLYRPAKRMPPDAEELWEIFV 323 Query: 297 ELEI 300 E +I Sbjct: 324 EEQI 327 >UniRef50_A5N491 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N491_CLOK5 Length = 301 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 10/288 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L F+T+ K NF +A N SQ + S IR+LE+ +G +LF R + L+E Sbjct: 1 MDIKQLQTFITVAKLLNFREAGEELNYSQSSVSDHIRSLEKELGTKLFERLGRKVFLNEN 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 GK S ++Q E + L ++ ++I AA +LS+ LP I+ + ++ Sbjct: 61 GKKLISLAEKIIQD-EKEIQGLFNKNEKISGLLRIGAAETLSVFWLPPILKEYRIIYPDV 119 Query: 131 IEAIDVDEAVD---KLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + +D+ V+ L D FS HD+ I + + V A D L Sbjct: 120 KVTLRMDDCVEFPKMLSHNMIDVAFSLHDQS-QHEYISQINILKDSTVFVAAPDHPLVNL 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + + + L + + + T S E +KQ G GI Sbjct: 179 NRIKIHELENQSFILPEAECCYRVELEELL-KENGIKIDTIMELSSLEAIKQCVKIGLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERF 291 + LP+ A+Q+EI G+L +L + I I A Y ++P Sbjct: 238 SLLPKIAVQREINKGELAILTIENCDISICAKMIYHKQKWISPPLNAL 285 >UniRef50_B9JIP5 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JIP5_AGRRK Length = 296 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 96/297 (32%), Positives = 148/297 (49%), Gaps = 13/297 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ET WL D L + NFS+AA +RNV+QPAF RRIRALE+ G+EL +R L+L+ Sbjct: 1 METVWLADLQALAETLNFSRAAENRNVTQPAFGRRIRALEEWCGLELVDRSTHRLKLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 G+I + +LE +L S + AA H+LS P I + + Sbjct: 61 GEIVLDAANDVANRLERVRQDL-DRSRADSSTVTFAATHALSFVFFPGWIQGLGHVTSTM 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 + + +++E + EG++ + + E+ L A F H+ L +L PVC D Sbjct: 120 PIRLLSDNMNECEKIMLEGRAQFLLCHYHENSKIRLDAADFKHVELSTDRLIPVCGKDGK 179 Query: 184 GEALFNL-AQPHFPL--LNYSRNSYMGRLINRTLT-RHSELSFSTFFVSSMSELLKQVAL 239 G AL +L P+ + + S MGR++ L+ R EL T F S ++ +LK +A+ Sbjct: 180 GGALHHLPGTQEAPVAEIAFEEKSGMGRILASNLSPRLGELHLKTVFTSHLAMVLKALAV 239 Query: 240 DGCGIAWLPEYAIQQEIR-SGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 DG G+AW+PE E+ G+L DE + ++ R RM +AE FW + Sbjct: 240 DGKGVAWIPESLAADEMGPKGRLAKAASDEWAVSVKIVLIRPRKRMTAIAEAFWELV 296 >UniRef50_Q0I520 Transcription regulator, LysR family n=3 Tax=Pasteurellaceae RepID=Q0I520_HAES1 Length = 309 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 119/295 (40%), Gaps = 8/295 (2%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ L F+ L +C N ++ A +QP+ S +I+ LE+++ LF R L L+E Sbjct: 15 DMNLSQLKAFIVLSECLNVTETANKLFCTQPSVSIKIKKLEESLNTVLFERINNRLYLTE 74 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PL 126 QGKIF + + +L LE+++ L D KI I A+H + + LLP II++ P Sbjct: 75 QGKIFQNYAKQILSTLETSIEHLHQYDDPNYGKITIGASHFVGVYLLPKIIAEYKKISPN 134 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 +I+ + + + KL Q D + + R +L + + Sbjct: 135 VKLSIDILPSPQLIHKLENHQIDFLIMSDQIYFDPQTYQTHRFLSDELILIASPKNPLAK 194 Query: 187 LFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 A L+ S + I + + E +K ++ G Sbjct: 195 KTACDFTALSQQQLIMKPNLSETRKFIFQHFNHEQITQLK-IMEFNSLEGIKHCVINNLG 253 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 ++++ A+ E+ S LV + L Y + + ++P +RF+ L Sbjct: 254 VSFISRLAVTHELNSQLLVEIPLKNLTFERGINYIFYKDKFISPAIQRFFSLLHN 308 >UniRef50_A1TLZ5 Transcriptional regulator, LysR family n=2 Tax=Acidovorax RepID=A1TLZ5_ACIAC Length = 326 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 93/313 (29%), Positives = 137/313 (43%), Gaps = 23/313 (7%) Query: 5 GAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTP 64 G ++ +WL DFL L + NFS+AA +R ++QPAFSR IRALE +G ELF+R P Sbjct: 2 GPGNRPLDLEWLEDFLALAESGNFSRAAEARAIAQPAFSRHIRALEDWVGAELFDRSAHP 61 Query: 65 LQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP 124 L+ G+ F + +L +LE+ + A ++ AA H LSL P + + Sbjct: 62 ATLTAAGQRFQPLLEDVLARLEAARIKACAAQAQAAASLRFAATHVLSLTFFPRWLGGLE 121 Query: 125 PLFTWAIEAIDVDE---AVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLFPV 177 D D + + + L EA + RL + L PV Sbjct: 122 SQLRLGPIQTISDSYQACEDLAMQRRVQFVLCHGHAAVPGRLDEAGYPAARLADDVLQPV 181 Query: 178 CASDEHGEALFNL--------AQPHFPLLNYSRNSYMGRL--------INRTLTRHSELS 221 A G L + A+P P+L YS S +GR+ + Sbjct: 182 SAPQGDGTPLHAIPGPESQGGARPPLPVLAYSDASGLGRIMRALRKGVFDAGGVAGMPGE 241 Query: 222 FSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN 281 F + + LLK +AL+G G+AWLP I +E++SG LV +P++ YR Sbjct: 242 VEVVFTAHHAALLKAMALEGRGMAWLPRSLIAEELQSGALVAAGPAGWDVPVEIRLYRQR 301 Query: 282 TRMNPVAERFWRE 294 T M+ AE WR Sbjct: 302 TEMSDAAETLWRL 314 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 119/297 (40%), Gaps = 11/297 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ + L F + + +F++AA N++QP+ ++++ ALE + V+LF RQ + L+ Sbjct: 9 SSMLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLT 68 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 G++ + R ++ ++ +R + + H++ L LP +++ P Sbjct: 69 PVGELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELLAAYVREHP 128 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---E 182 ++ + E V L G+ D + + + + LFE L V + Sbjct: 129 RVKINVKTGNNRETVTMLLHGEVDVGLVTTPQ--VHERIEVVPLFEDPLVVVAGPSFAAD 186 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + N P + Y R + ++ L + E +K + G Sbjct: 187 LPPVVSNADLAQLPFIGYVRGARFRMTTDQVL-EEMGIQPQFVMEFDNHEAIKTMVALGF 245 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVI--PIQAYAYRMNTRMNPVAERFWRELRE 297 GIA P A+Q+E+ SG+LV LN L + R R + F L + Sbjct: 246 GIALEPVSAVQRELISGQLVRLNVPGLPRLSRTTSLILRRGERRSEAVRAFLSLLEQ 302 >UniRef50_B7H371 HTH-type transcriptional regulator cbl n=11 Tax=Acinetobacter RepID=B7H371_ACIB3 Length = 298 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 160/299 (53%), Gaps = 11/299 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTP-LQL 67 N+E +W+ D LTLE+ R+ S+AA R +SQ AF+RRI+ +E+ IG E+ R ++ Sbjct: 1 MNLEVRWVEDLLTLERERSISKAAEKRFISQSAFTRRIQQIEEMIGAEVIIRNNKNNIEF 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 ++ G+I +++ +Q+E ++ + + I+ HSL+ G L + + + P L Sbjct: 61 TDIGRILLVMSKNIEKQVEETAKLIKNIKNEIESTIRFCVVHSLASGFLTTFLKKFPTLI 120 Query: 128 T---WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHI----RLFESQLFPVCAS 180 I A + E + L+EG D + + D+ + D I ++ E+ + PV A+ Sbjct: 121 RDLKIEIVATNSGEGLSLLKEGACDFMICYADKSNIRKVGDDILSGIKIAETVIVPVSAT 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 + + Q +F LL YS+++Y+ +L+++ + +L + T + + + LK++ L Sbjct: 181 EPDHSPKHTI-QSNFALLAYSKHAYLRKLVDQLI--EGKLIYKTLYETDNATNLKELVLQ 237 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 G G+AW+P+ +++++ +GKLV+L++ E + Y ++ N N ++ W + + Sbjct: 238 GLGVAWIPKINVEEDLAAGKLVILDQQEYCLAQDIYIFKNNLSDNKSVQKIWNGFKGQQ 296 >UniRef50_B1JFP7 Transcriptional regulator, LysR family n=4 Tax=Pseudomonas RepID=B1JFP7_PSEPW Length = 297 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 12/292 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E WL D L + +F +AA +R+V+QPAFSRR+R+LE +GVELF R L+E Sbjct: 1 MELVWLEDLSALAEYGSFVRAAEARHVTQPAFSRRVRSLENWMGVELFVRSPHGATLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ + + L +E + + A R ++ AA HSLS P + P+ Sbjct: 61 GRHILPSAQEAARSLYRIRSEAQEVAGVAARSLQFAATHSLSFTFFPKWLRSSESGAPIE 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 + + + L GQ + D L F ++ E L P+ ++ Sbjct: 121 AVQLHSDSMAVCEQMLIHGQVQFLLCHRHPDVPPLLAPEQFTSKKVGEDTLVPLASA--- 177 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLI-NRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 A F + P L Y+ S +GR++ +R + L F S ++ +L +AL+ Sbjct: 178 -RADFGTSPAALPYLAYTHESGLGRIVAHRLRGKEDYLHLKPLFTSHLAAVLMSMALESK 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRE 294 G+AWLP+ +QEI G+L+ + IP++ + R ++ AE FW Sbjct: 237 GVAWLPKSLTEQEILDGRLIRALDESWDIPLEIHLTRPKATLSQSAETFWAR 288 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 122/296 (41%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F + + ++FS+AA ++SQPA S I+ALE+ G +L +R + L+ Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+I + HLL ++ ++ + + K+ + A+ ++ +LP ++S P Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +E ++ ++ ++++ + D F + ++ L +L V A++ Sbjct: 121 NITMEIMNTEKVLERVSDLTLDLGF--VEGEVTTGELHVEALARDELVVVVAANHPLAGR 178 Query: 188 FNLA---QPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 ++ PL+ S ++I L +E +K G Sbjct: 179 GRISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEAGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRE 297 G A L ++ +++EI G L + L I + Y N +P + + RE Sbjct: 239 GAAILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHSPATQALIQFCRE 294 >UniRef50_D0ZGF0 Transcriptional regulator n=2 Tax=Edwardsiella RepID=D0ZGF0_EDWTE Length = 299 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 16/295 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL DF++L++ NFS AA +RNV+QPAFSRRIRALE +GV LF+R P+ L+ Sbjct: 1 MDVKWLEDFISLQRLGNFSAAARARNVTQPAFSRRIRALEIWLGVPLFDRSSNPIALTPY 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ F +L ++ + + + ++IA+ H+ ++ +LP ++ M Sbjct: 61 GEKFLPSAEDILARILDVKLDFAQLAIQSDETVRIASLHTFAVNMLPMLLDAMGSALEGI 120 Query: 131 IEAID-----VDEAVDKLREGQSDCIFSF-----HDEDLLEAPFDHIRLFESQLFPVCAS 180 ++ +D + L E +D + + L L PV + Sbjct: 121 KVVVNPGLQGIDNHFNTLLENSADLLMVYDIDGARPSAAEMDCLQSHLLAHETLIPVIS- 179 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 QP P L YS S++GR++ L RH+ + +SMSE LK + L Sbjct: 180 -RALAQRHPPGQP-LPYLAYSDFSFIGRVV-APLCRHAPQPLVKCYETSMSEGLKHMVLR 236 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIP--IQAYAYRMNTRMNPVAERFWR 293 G+AWLP + +E+ G L D + +Q Y+ P ERFW+ Sbjct: 237 DRGLAWLPLSMVHRELAQGVLCNAFPDYPRLSRCLQILLYKRRESSRPAVERFWQ 291 >UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=C6CWT6_PAESJ Length = 302 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 125/297 (42%), Gaps = 14/297 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ NF++AA + + + +I+ALE+ +GV LF+R L L+ Sbjct: 1 MELRQLNTFCTVATTLNFTRAAEALSYVPSNVTMQIKALEEELGVRLFDRLGKQLALTTA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F + + +L++L+ + + + + I+A + LP + + P Sbjct: 61 GKRFLTHAQGVLEKLDEARSVVHDNAQL-SGTLTISANEVICSYRLPPVFQRFRSQHPGV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ E L EG +D ++ DE + + L E + A D Sbjct: 120 RLIFRSVPNQELKQTLFEGTTDIVYML-DEPICSSGLVVEPLVEENFRLLAAPDHPLAKR 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L F L + + +R+ + S T+ +E +K+ A+ G GI Sbjct: 179 TVLKLEDFHEEVFLTNEKGCPYRTMFDRSFEKEGIDSI-TYLEFQSAEAIKKCAISGIGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY---AYRMNTRMNPVAERFWRELREL 298 A+LPE ++ E+ G+LVVL + +Q Y + ++P+ F R + Sbjct: 238 AFLPEIVVEAEVERGELVVLP--WQIPDLQVYTQMLRHKDKWLSPIMLSFIEATRNV 292 >UniRef50_Q2SL06 Transcriptional regulator n=3 Tax=Oceanospirillales RepID=Q2SL06_HAHCH Length = 312 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 16/303 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +WL DF+ L K R+FS+AA +NV+QP FSRRI+ LE+ +GV+L +R PL L+ Sbjct: 1 MEIRWLEDFIALAKTRHFSRAADEQNVTQPTFSRRIKLLEEEMGVQLVDRNTLPLSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G++F + + L E + ++ A +L L + + A Sbjct: 61 GELFLDAADKITRILRDTREECHAIHEEQSSRLVFATTQTLYLSFYKTWLEPFSRALDIA 120 Query: 131 IE------AIDVDEAVDKLREGQSDCIFSFHDEDL------LEAPFDHIRLFESQLFPVC 178 ++ A V + L E Q D + + + F+++++ +L P Sbjct: 121 LDLNLHSTAWTVRDFSHALLEQQCDIMLCYWHPSIELLADATPNEFEYVKIAGERLLPCS 180 Query: 179 ASDEHGEALFNLAQPH---FPLLNYSRNSYMGRLINRTLTR-HSELSFSTFFVSSMSELL 234 + DE G F L P ++Y N+++ +++ T+T ++L T + S + Sbjct: 181 SVDETGAPKFVLPGHKRRPIPFIDYHDNAFLKPVVHHTITHSQNDLHLVTVNKNFHSVSV 240 Query: 235 KQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRE 294 K + +G G+ W+P Q+ IR G++ + ++ YR +P E+ W + Sbjct: 241 KAMIREGFGVGWIPFRLAQESIRYGRMKAAGDERYYTDLEVRFYRKKDNKHPSLEKLWNK 300 Query: 295 LRE 297 L+E Sbjct: 301 LKE 303 >UniRef50_A1TXT6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1TXT6_MARAV Length = 301 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 14/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +WL DFL L + R+FS+AA ++VSQP FSRRI+ LE+++G L NRQ PL L+ Sbjct: 1 MEIRWLEDFLALARTRHFSRAAEQQHVSQPTFSRRIKLLEESMGTTLINRQTLPLSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--PPLFT 128 G++F + +++ + A +I + + L ++M Sbjct: 61 GEVFQELCERITREVRDTRDRIAALDAEASARISVGSTQGLFSHFYQGWATEMGIAERLQ 120 Query: 129 WAIEAIDV--DEAVDKLREGQSDCIFSFHDEDLLEA------PFDHIRLFESQLFPVCAS 180 + A + ++ +D L G+ D + + DL F + L PV + Sbjct: 121 LNLTATNWVGEQFLDALESGECDLVLCYWHPDLPWGDRLASDKFQWQTIGREALVPVSIA 180 Query: 181 DEHGEALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMSELLKQ 236 +E GE + L + PL+ Y ++ I+ L R + ++ S +K Sbjct: 181 NEQGEPRYRLPGTNEQPVPLIAYHSRGFLQSAIDGHLQRGKLPANLLPLNENTQSASIKA 240 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 + G G+ WLP+ ++ + G+LV + +P++ R++ + W++L Sbjct: 241 LVKQGFGMGWLPKRMTEKSEQFGRLVRAGDERWDVPLEIRLIRLSDARSDDILNLWKQL 299 >UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9X7_CLOTS Length = 297 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 124/294 (42%), Gaps = 10/294 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ + L FL++ + + S+AA ++QPA S+ I LE ++LF+R L L+ Sbjct: 1 MDMNFRELNIFLSVCELGSMSEAARHLYMTQPAISQAISELEGEYNIKLFDRIGKKLVLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 G+I + + L LR SD K+K+ A+ ++ LLP +I + Sbjct: 61 HAGEILRDYGKKINLLLNEAENTLRDISDMKMGKLKLGASRTVGTYLLPQLIGEFLKIYK 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + E V + E + D + + + + +L+ +C+ D + Sbjct: 121 NIELPFYIDNTSEIVKMIHENEIDLGI--VEGPIHSDNIEVKYFLDDELYLICSKDHNWA 178 Query: 186 ALFNLAQPHFPL---LNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + + L + S + TL H+ + ++ + +E +K+ Sbjct: 179 KKKIINKDDLSLENIIIREVGSGTREVFENTLKAHN-IEYNIKLELNSTEAIKRAVEANL 237 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL 295 G++ + + AI++E++S +LV + D + Q Y + ++ + ++F L Sbjct: 238 GVSVISKLAIKEELKSSRLVKVEIDGVKFLRQLNIIYHKDKYLSELCKKFIDFL 291 >UniRef50_A8LJG0 Transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LJG0_DINSH Length = 310 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 8/293 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ D L + NFSQAA N+SQPAFSRRI++LE+ +G L +R P+ L+E Sbjct: 7 MDITLFRDLDRLRQTGNFSQAAALVNLSQPAFSRRIKSLEKWVGAVLVDRSRQPVVLTEA 66 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQR-KIKIAAAHSLSLGLLPSIISQMPPLF-- 127 G L ++E +++R + + A HS+ P+ + + + Sbjct: 67 GTQMLEAGMQALARIEQERSQIREAQSLPDKYVVTFATQHSIGWRFYPAWLQALEEAYGP 126 Query: 128 -TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDH-IRLFESQLFPVCASDEHGE 185 + A D+ ++ L++G D + ++ ++ +R+ L PVC D G Sbjct: 127 ILSRLRADDLPNCLNDLKQGAVDFVIAYASAEIRPQAGQPGVRIGSDDLIPVCKPDGAGA 186 Query: 186 ALFNLAQP--HFPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSSMSELLKQVALDGC 242 +++ A P L + + +G + H S F T + +SM+ L+ A G Sbjct: 187 PIYDCAAAGVRMPFLRFGDAAPIGMHLEPLFAAHGLRSRFRTVYENSMAGALRIRARAGD 246 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G+AWLP + ++ G LV + IP++ YR R N V W L Sbjct: 247 GVAWLPHSLVAPDLAGGLLVRTGPPDWDIPLEILIYRNAERSNRVTRALWSFL 299 >UniRef50_C6Q178 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q178_9CLOT Length = 303 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 81/301 (26%), Positives = 131/301 (43%), Gaps = 16/301 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L FL + + NF AA N SQ S IR LEQ + V+LF R + L+EQ Sbjct: 1 MYIRQLQTFLVVARLLNFRAAAEELNYSQSTVSDHIRNLEQELDVKLFERFGRKVFLNEQ 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ S + +++ E + +L + + +KI +A +L + LP ++ + P Sbjct: 61 GEKLISPAKKMIKDAEE-IHKLFDNDEKIKGTLKIGSAETLCVFWLPPLLKEYSKIYPDV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 ++ D E + L + D FS HDE + I LF+ V A + Sbjct: 120 QIILKMADCLELPEMLEKNIIDAAFSLHDES-AQQQLSQIDLFQDSTIFVAAPNHPLTSV 178 Query: 185 --EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + L F +L S+ Y L + L + + +T S E +KQ +G Sbjct: 179 KKITAYELENQAF-ILTESKRGYSFEL--KKLLENLNIKTNTIMELSSLEAIKQCVKNGL 235 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERF--WRELRELE 299 GI LP + +E+++G+LV+L + I IQA Y M+P LR+ E Sbjct: 236 GITLLPRIVVDKELQNGELVILPVEINQILIQAKMIYHREKWMSPPLLALKNIVLLRKDE 295 Query: 300 I 300 I Sbjct: 296 I 296 >UniRef50_A9EZ85 Transcriptional regulator, LysR family protein n=7 Tax=Rhodobacterales RepID=A9EZ85_9RHOB Length = 307 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 14/307 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL DF L +NFS+AA RNVSQPAFSRRIRALE +GV+L NRQ PL L+ Sbjct: 1 MDIIWLRDFEALTTHKNFSRAAEERNVSQPAFSRRIRALEDEVGVKLINRQTFPLSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G +F SQ + +L+ L + + I+ A++ SL + I + Sbjct: 61 GDVFLSQAKIILRTYSETLERCQTIDAAGENVIRFASSQSLYMTHFRDHIEPLMEAGGLD 120 Query: 131 IEAIDV----DEAVDKLREGQSDCIFSFHDE------DLLEAPFDHIRLFESQLFPVCAS 180 ++ D+ V L++ D I ++ L + D++ L E + PV + Sbjct: 121 VDLNSTSWAADQFVTALQQRYCDVILTYWHPAMDFLSPLEVSKCDYLTLSEDEFIPVSKT 180 Query: 181 DEHGEALFNLAQP---HFPLLNYSRNSYMGRLINRTLTRH-SELSFSTFFVSSMSELLKQ 236 D G LF+L + PLL+Y S + +++ TL + S + +S++ +K Sbjct: 181 DADGSPLFDLRRDPKRQIPLLSYGSASALRSVLDHTLRQQISPPNLLVVNQNSLANSVKA 240 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 + L+G G+ WLP + E+ G+L V + V P+ YR P WR + Sbjct: 241 MILEGFGLGWLPRKLCEAELTEGRLAVAGGEAFVTPLSVRLYRETENSKPTLNSLWRRMG 300 Query: 297 ELEIVLS 303 + +S Sbjct: 301 DSATSIS 307 >UniRef50_A6GPQ8 Putative transcription regulator protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GPQ8_9BURK Length = 303 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 147/289 (50%), Gaps = 18/289 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ETKWL DF+TL + +NFS+AA R V+QPAFSRRI+ALE +G EL +R P +LS Q Sbjct: 1 METKWLEDFITLAQTKNFSKAANLRCVTQPAFSRRIQALEGWLGCELIDRGSYPTRLSPQ 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP------ 124 G++F+ Q +L+Q+ +RGGS +++ I++ H+L+ P + + Sbjct: 61 GEVFYEQALTMLEQIRQARTIVRGGSLQSRQPIRLVVPHTLACSKAPHWVRSLKTKLVDR 120 Query: 125 -PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLFPVCA 179 P ++ + A +V +AV +G SD + +H +L + F+ L + P A Sbjct: 121 LPDLSFQLTASNVHDAVLYFTDGASDFLICYHHSREPIELDPSKFEVRVLGIERFAPYSA 180 Query: 180 SDEHGEA---LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQ 236 + G L LA P L+YS+++Y+ ++ + + + F + MSE LK Sbjct: 181 ASAEGNPIYSLDPLAPLPVPYLSYSKHAYLSKMTDIAMEAGPLFLKKSLFETDMSESLKS 240 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMN 285 + G G+AWLPE A+ SG L + ++ YR R Sbjct: 241 MCEAGLGVAWLPESAVVP--GSG-LCKIPGPY-YTDMEIRLYRRIHRHT 285 >UniRef50_Q46VM9 Transcriptional regulator, LysR family n=4 Tax=Cupriavidus RepID=Q46VM9_RALEJ Length = 350 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 78/308 (25%), Positives = 143/308 (46%), Gaps = 25/308 (8%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + +WL DF+ L + + ++AA RNV+ PAF RR++ALE G L +R P++L+ + Sbjct: 35 MHIRWLEDFICLAQAGSLARAAELRNVTPPAFGRRMQALEVWAGAPLIDRSAFPVRLTAE 94 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL---- 126 G+ F ++ LQ LE LR + IA +L+ ++P+ ++ + + Sbjct: 95 GRQFLEAAQNALQTLEDARLALRTAHRADASTLTIATGKTLARSMVPAWLAGLRRVLGHD 154 Query: 127 -----FTWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPV 177 F + + +A+ EG +D + + D L +A + + +L V Sbjct: 155 KAAAGFRTRLSTFPMHDALAMFTEGDADFLLCYSPPDIPVMLDDARYRFHMVGVERLVCV 214 Query: 178 CASDEHGEALFNLAQPH-------FPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSS 229 A+D G F L P++ Y+ + +GR++N+ + R S VS Sbjct: 215 SAADARGAPEFRLQAAKGGARTAPTPMIAYADSLTLGRMVNQEIARRKLASRLDVIAVSD 274 Query: 230 MSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVL----NRDELVIPIQAYAYRMNTRMN 285 +E + ++ G+AWLP I ++ +G+LV + +E+ + ++ YR M Sbjct: 275 FAESVHEMVRQRMGLAWLPARLIADDLHAGRLVRATAGRSAEEVDLALEIRLYRQRAPMR 334 Query: 286 PVAERFWR 293 P+AE FW Sbjct: 335 PLAEAFWE 342 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 126/297 (42%), Gaps = 13/297 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E L F T+ + ++FS+ + +++QPA S +I+ALE+ +LF+R + L+ Sbjct: 1 MEDHKLKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI---ISQMPPLF 127 G+I + + +L E+ + + +KI A ++ +LP++ + P Sbjct: 61 GEILYKYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + + ++ L D + D I +L +C++D Sbjct: 121 RVSVSIGNAKKILEMLNSSMIDFGIISEMPGKSKFIVDSI--ISDELCVICSADHPLNNQ 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVS---SMSELLKQVALDG 241 +++ P + S +I + L H LS S +S + +K+ G Sbjct: 179 KSVSLYDVVKEPFVIREEGSSTRVIIEKFLAEHG-LSVSDLHISLILGSTGSIKEAVERG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRE 297 G++ + ++AI++E+ G L +L E I Y NT ++P E F L+ Sbjct: 238 IGLSIVSKWAIRKEVSCGNLRILKLKEGKITRDFYIILPKNTILSPAVEEFITYLKN 294 >UniRef50_B7UYE4 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7UYE4_PSEA8 Length = 317 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 93/303 (30%), Positives = 143/303 (47%), Gaps = 16/303 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 I+ L DFL L + ++FS+AA +VS SRRI+ LEQ +G +F R L+L+E Sbjct: 2 IDLVMLKDFLVLCRIKSFSRAAQECHVSVSGLSRRIQTLEQWLGAPVFERHKHALELTEA 61 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+ + ++ L++ +R + AQR+I+ A H LS P I ++ F A Sbjct: 62 GRQLQGVAQDAVRALDNLRQSIRERDEDAQRRIRFCAPHILSSVFFPHWIPRLQADFRSA 121 Query: 131 IEAIDVD---EAVDKLREGQSDCIFSFHDEDLL---------EAPFDHIRLFESQLFPVC 178 ++D D + + +LR+G D + + DE EA F + L QL VC Sbjct: 122 KFSVDCDYLPQCLSRLRDGSVDYVVALLDEGEAVSRRLGIDSEAEFQRLELGHEQLVAVC 181 Query: 179 ASDEHGEALFNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLK 235 A D G+ LFNL + L YS ++G + L R S L SS +E L+ Sbjct: 182 APDAAGQPLFNLDRLQTEALSFLGYSEECHLGWALEPLL-RDSGLFLQRHHSSSQTEGLR 240 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 A G+AWLP +++++ S +LV +P++ R + AER W L Sbjct: 241 FFAQSRLGVAWLPHTLVREDLASRRLVRAGGQRFDVPLRYTLIRRRLPLPGEAERLWTFL 300 Query: 296 REL 298 EL Sbjct: 301 GEL 303 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 120/296 (40%), Gaps = 14/296 (4%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 ++ +++T L FL + + +FS AA ++QPA S+RI ALEQ + LF+R + Sbjct: 1 MITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVA 60 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--- 123 L+E G+ + + +L + +R S +++A +H + L LP I+ + Sbjct: 61 LTEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGLHHLPPILREFAAN 120 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 + +D ++A +K+ G D L E + L+ L + ++ Sbjct: 121 HKQVNLQFDFLDSEQAHEKVLRGDCDLAVVTLAPTLEEN-LEASVLWPDPLCFIVGANHP 179 Query: 184 GEALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 N++ P + N+Y GRL+ L+ + ++ E +K + Sbjct: 180 LATSKNISLEELSRTPAILPDLNTYTGRLVKHFFDTQG-LALNLNMATNYLETIKMMVTV 238 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL 295 G G + LP+ + L +L + + Q + A F+ L Sbjct: 239 GLGWSVLPKTMVDS-----SLKILPIKNIQLERQLGVVIHKKRTLGNAARAFFEVL 289 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 127/294 (43%), Gaps = 11/294 (3%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 +IE + L FL + K +F++AA N+SQP+ S++IRALE +G+ LF+R + L+E Sbjct: 8 SIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLTE 67 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPL 126 G++ S + + ++E + ++ + + I + ++ LLP I P Sbjct: 68 AGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYPN 127 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE---H 183 ++ + E +KL + + D +F + + I L++S+L V + Sbjct: 128 IELSVLGLRTGEIREKLLQNELDIGITFLP--VQDKEIVSIPLYKSELTLVVPTSHSLTE 185 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + + +PL+ +N Y+ LI + S E L Q+ G G Sbjct: 186 RKYVSIEELQDYPLILLPKNFYLTELITSHCQNFN-FKPKPILEISTMESLIQMVAQGMG 244 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 I LP+ I +++ + + + I YR + M +F +L+ Sbjct: 245 ITVLPKPYI-DFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFIEQLK 297 >UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2B6_DESAS Length = 291 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 134/294 (45%), Gaps = 8/294 (2%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + +I +L F ++ + ++S+A N+SQPA SR+I +LE+ +G++LF ++ + L Sbjct: 1 MTDIIFNYLRVFHSVARHLSYSKAGEELNLSQPAVSRQISSLEKGLGLDLFTQRGRKVVL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP--- 124 ++ G+ + ++ + L D + ++++ + L LLPSI+ + Sbjct: 61 TDAGRSLYDYADRIMGLAQQAGRTLAQYHDLERGEVRLGVSPVLGCYLLPSILKEFYTRF 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P +++ + + ++ +G+ D + + R + L VC E Sbjct: 121 PNIKVSLQLDSGQKLIKRIEDGKLDLALVVGPLESDRIHLE--RYTQDALVLVCPPGEDS 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +FN ++PL+ + S I L ++ ++ +E++K++ + G G+ Sbjct: 179 -PMFNEIFINYPLITREKPSSTRITIEDHLAKY-DIRPKLIMEIPDNEVIKRLVITGIGV 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMN-PVAERFWRELRE 297 A+LP+ A++ E+ SG L V+ + + Y + + P F +R+ Sbjct: 237 AFLPKRAVETELVSGALQVVKGEGTALTRWVYLVTAKDQHHCPTLLAFMNFMRK 290 >UniRef50_B3DZ70 Transcriptional regulator, LysR/CysB family n=5 Tax=Verrucomicrobia RepID=B3DZ70_METI4 Length = 309 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 12/300 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F L + R+FS+AA +SQ A S++IR+LE+ GV L R +QL+++ Sbjct: 1 MQIETLKAFRDLVESRSFSKAAQLNKISQSAVSQQIRSLEERFGVPLIERGSRKVQLTKE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+I + R ++ A++ I+++A +S+ L LP + + P Sbjct: 61 GEILYHAAREIVDIYTRIEAKITEIKASVSGNIRVSAIYSVGLHELPYYLKKFLKLYPEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +E + + EG SD + + R + ++ +C+ L Sbjct: 121 NIRVEYRHSRQVYQDIIEGNSDIGIVAYPSPRKLIKIEPFR--KDRMVVICSPTHRFSQL 178 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + +S + R +++ L R L F E +K+ G+ Sbjct: 179 KEVGLEEIAREGFIAFSSDMPTRRELDK-LFRDRGLEFRPVMEFDNVETVKRAVEIDAGV 237 Query: 245 AWLPEYAIQQEIRSGKLV--VLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVL 302 A +P I QEIR+G L L+ PI Y+ + P +F L++ E+ + Sbjct: 238 AIVPMATITQEIRNGTLKMLELSGPPCYRPIGI-LYKSGRMLTPAMRKFIEILQKEEVPI 296 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 108/293 (36%), Gaps = 10/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + + +F +AA N +Q S RI ALE +GV LF R + L+E Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ L+ + A + G S + + + SL LP +I+ P Sbjct: 61 GERLVQYAAKLIDVEDEARAWVTGESRL-RGLLTVRVPESLCAYRLPPVIAAFRRRHPEV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + A ++ LR+G +D F D + + L L V A A Sbjct: 120 ALHLTACTLNGLEKDLRQGITDLAFVMADS-VRGGDLNVEALGVEPLVLVAAPHHPLAAR 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L+ + + +I L + + S + L+ G GI Sbjct: 179 DRVVARDLHGITLVLSTTDCAYRTVIEEALAAEG-IQPAAGLEFSSASALRGCVASGVGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN-TRMNPVAERFWRELR 296 LPE A++ E+R+G L L + R ++P + F R Sbjct: 238 TLLPEAAVRDELRAGTLRALAWADQPFETAVLMVRHRGKWVSPYMDTFMELCR 290 >UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPG0_PSEMY Length = 294 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 11/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L FL + + + S A ++SQPA +R IR LE + + LF+R +QL+E Sbjct: 1 MNLHHLKVFLAVAEAGSISAGAERLHISQPAVTREIRELEANLDLRLFDRLPRGVQLTEG 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ R + ++ +LR + Q ++ + A+ +L LLP +IS+ P Sbjct: 61 GQRLLDYARRIFALEQAAERDLRDFAQLEQGELHLGASATLGAYLLPPLISRFRALHPQI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---- 183 ++E + + +L +G+ F + +A +DH L L PV A Sbjct: 121 FVSLEVSNTEAVTRQLDDGRISLGF--VEGPFAQADYDHRLLARDALLPVVAPRHPLART 178 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 L +PL S + H L +E LK++ DG G Sbjct: 179 AAPLQASELQAYPLYMREPGSGARASVEHAYRVHG-LEPRAGMAIGSTEALKRLLADGQG 237 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRE 294 IAWL + +++E+ SG+L L +L I + + +R ++P F Sbjct: 238 IAWLSQRVVERELASGELQRLTVQDLQIERELHVLWRPGASLSPAPAAFLAL 289 >UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVL6_9BACL Length = 302 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E++ L+ FL + + +F++AA + +Q + + +I+ALE IG+ LF+R + L++ Sbjct: 1 MESRHLFTFLVVVEAGSFTRAAQQLDYAQSSVTAQIQALEAEIGLPLFDRIGRKIVLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ + + + E L ++ A +KI A SL+ LP +I PL Sbjct: 61 GRRLLPYAQEIAKIHEMAKNALHPAAEMA-GSLKIGAPESLAAFRLPEVIRHYRQRYPLV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE---HG 184 ++ E D +R G+ D F E + + L + V +D H Sbjct: 120 QIVLKPGQCWELRDLVRSGELDVAFLLQPE-VEDRDLQIETLVHEPMALVAPADHPLRHE 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + +L+ L R L H E +KQ + G G+ Sbjct: 179 AEVVPDQLKDQTILHTESGCSYRTLFERYLNSHGVFP-DPNLEFWSIEAIKQCVMSGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWRELREL 298 ++LP ++ E+ GKLV LN ++ + A +P E+F +RE Sbjct: 238 SFLPLVTVRSELAEGKLVKLNWNDESQRVATQLALHRKKWRSPALEQFVLMIREQ 292 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 122/300 (40%), Gaps = 10/300 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ + L F ++ + R+FS+AA +SQPA S +I++LEQ +GV LF R ++L+ Sbjct: 1 MDVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 E G+ LL L+ LA + + ++++AA+ + + ++P + P Sbjct: 61 EAGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 +++ ++ +L G +D ED + + ++L + + H Sbjct: 121 GVELSLDVLNRFAVHQRLLAGDADVAIMGLIED--PQDLEIEQFLPNELVVIASPRHHLA 178 Query: 186 ALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + P L S + R LS + +KQ Sbjct: 179 RRHQIPLDEIAREPFLVREIGSGTRADMERIFAEAG-LSPRVAMELRSNGAIKQAVAADL 237 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWRELRELEIV 301 G+A +P AI E+ +G+L+VL+ + R R + A+ W L + + Sbjct: 238 GVAVMPRDAIGLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAAADALWNFLLQYRLQ 297 >UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=Bacillus RepID=A0RKW5_BACAH Length = 306 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 17/285 (5%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 ++ GA N++ L F+T+ + ++FS+AA N+SQP S IR LE G L R Sbjct: 2 IEKKGADYMNVDI--LKIFVTVVEQKHFSRAAELLNLSQPGVSMHIRNLENEFGTTLIQR 59 Query: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 +Q++E G I + + +L E ++ + ++I A+ ++ LLP I+ Sbjct: 60 SPKHVQVTEAGNILYIHAKQMLSLYEDAKQKINELHNVVTGTLRIGASFTIGEYLLPKIL 119 Query: 121 SQM---PPLFTWAIEAIDVDEAVDKLREGQSDCIF-----SFHDEDLLEAPFDHIRLFES 172 + P + ++ + LR Q D + D D+ D ++L Sbjct: 120 ANYANENPHVEVHTFISNTEDVLQSLRSNQIDIGLVEGQVVYADVDVETFMQDEMKLVVP 179 Query: 173 QLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSE 232 P+ ++E E+ + S +R + +H L FF S + Sbjct: 180 PNHPLLRTNEMNES----TLQDQVWVLRESGSGTRAYSDRFIHQH-HLKMKRFFTFSSIQ 234 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIRSGKL--VVLNRDELVIPIQA 275 +K+ G GIA L ++ +++E+ + +L V + ++L+ P Sbjct: 235 SVKEAVSAGLGIAILSDWTVRKELLAKELFHVEVPNEQLIRPFSI 279 >UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=B1KU62_CLOBM Length = 293 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 121/291 (41%), Gaps = 10/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F + + N ++ A +SQPA S+ I LE +GV+LF+R L L+ + Sbjct: 1 MNERKLRIFYEVAEKLNMTEVAEKLYISQPAVSQTILELESELGVKLFDRINRRLYLTNE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F + +R +L + + L+ + K+KI A+ ++ + +LP II + Sbjct: 61 GELFLNYVRRILNMYDDAIRSLKDINSLKTGKLKIGASTTIGIYILPDIIGKFTKQYKGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +I + D + + D F+F + + + +L + + + Sbjct: 121 DTSIAIENTKLISDMILDNSID--FAFVEGPVYNEEIIKENFCDDELVFITSPEHPWSNK 178 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ ++ S + +T + ++++ F +E +K+ G G+ Sbjct: 179 DEISITEVDKEKIIMREIGSGTREVFESYMT-ANNVNYNIAFELGNTEAIKKAVEAGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRE 294 + + + I+ EI + L E I + Y + ++ + + F + Sbjct: 238 SCISKRCIKNEINNNTLSWTKLKEFEIKRKLILIYHKDKFLSTLLKTFIKF 288 >UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=Clostridium RepID=A6LQS5_CLOB8 Length = 324 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L FLT+ K ++F++AA + +Q + + +I+ LE +GV+LF R + L+ + Sbjct: 27 MDFKQLNAFLTISKLQSFTKAADNLGYAQSSITTQIKLLESELGVKLFERIGKNITLTHE 86 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK + +L+ L S + +D + I AA SL + LP I+ + P Sbjct: 87 GKKLLPYAKQILK-LSSAVKNAVLNTDVPSGTLTIGAAESLCVLRLPEILKEYKKLYPEV 145 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 +++ + E L + D FS + I + + + A H Sbjct: 146 DISLKFGNCAEFKYFLNDNIIDVAFSLGVKINSAEFISEIEI--PEPMLLLAYPGHPLIN 203 Query: 185 -EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + +F PL+ + L + + + + + +KQ + G G Sbjct: 204 KKEVFPKDIESEPLILTEMGCSYRATLENILNSCN-IKPNVAIETGSVQAIKQFTMSGLG 262 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 I LP+ A+ EI SGKLV LN I + Y N ++P + F R Sbjct: 263 ITLLPKVAVDDEINSGKLVPLNWKGPDFGIISQVLYHKNKWISPALKEFLNLSR 316 >UniRef50_B9R307 LysR substrate binding domain, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R307_9RHOB Length = 311 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 19/304 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ D L L + NFSQAA N+SQ AFSRRIR+LE +GV L +R P++L+ Sbjct: 1 MDLYLFRDLLRLSQTGNFSQAAQLCNLSQSAFSRRIRSLEAWVGVTLVDRSRQPVRLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQR-KIKIAAAHSLSLGLLPSIISQMPPLF-- 127 G L ++E ++L + + A HS+ P+ + + Sbjct: 61 GLQMLEAGTQALDRVEHERSQLLEAQSLPDKYVVTFGAQHSIGWRFYPTWLQSFEETYGP 120 Query: 128 -TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEA------------PFDHIRLFESQL 174 + A D+ + L+ G D + ++ + P + +++ + L Sbjct: 121 ILSRLRADDLPNCLRDLQNGDVDFVIAYESAHVRYCDTGRRMARSNALPLETLKIGQDTL 180 Query: 175 FPVCASDEHGEALFNL--AQPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMS 231 PV G LF+L P L + + +G+ + + + + ++M+ Sbjct: 181 IPVSKPTPDGAPLFDLNSGLLELPFLRFGDEAPIGQHLGSLFEQEKIQERLRVVYENAMA 240 Query: 232 ELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERF 291 L+ A DG G+AWLPE + Q+IRSG LV R E +P++ +R + N + Sbjct: 241 GALRIRARDGMGVAWLPETLVAQDIRSGALVQTGRPEWSVPLEITLFRNDKHTNRLTRSI 300 Query: 292 WREL 295 W L Sbjct: 301 WSFL 304 >UniRef50_B1YFC0 Transcriptional regulator, LysR family n=3 Tax=Bacillales RepID=B1YFC0_EXIS2 Length = 307 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 125/291 (42%), Gaps = 11/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L FL + + +++ AA +Q + ++ LEQ++G E+F LQL+ Sbjct: 1 MEIRHLATFLKIIETGSYTAAAAELGYTQSTITSHMQTLEQSVGGEVFTYFNRKLQLTAL 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK LL + +D +++AA SL++ L +I + P Sbjct: 61 GKELIPLAEDLLATHDKIKNM--QKTDVLCGTLRVAAPESLTISRLGPVIKRFSQHHPDV 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + E ++L G+ D +E H+ L E ++ V A D E Sbjct: 119 KLILTNGTCGENQEELLNGRVDVAMMLFPAMAVEKCLHHV-LTEEKIVMVGAPDA-PEHF 176 Query: 188 FNLA--QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 ++ Q + + + + LT+ + LSF T + S+ +K++ + G G A Sbjct: 177 KDIQKKQSDHVYITNEQGCSYRTMFEQHLTKQNLLSFQTMELWSIG-AIKKMVMSGLGFA 235 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWREL 295 LP +Q+E+ +G L ++ +DE PI ++ + ++P+A F + Sbjct: 236 VLPYITVQEELENGSLKIIKQDEAFEPIYSHILIKKKKWVSPIAHAFMEAV 286 >UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J293_DESDA Length = 308 Score = 213 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 116/301 (38%), Gaps = 11/301 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F + + NF+QAA ++QPA S ++++LE ++GV LF+R + L+ + Sbjct: 1 MNIDHLKTFHKIAETGNFTQAARDLFLTQPAVSMQVQSLENSLGVPLFDRSRRKVNLTSE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPS---IISQMPPLF 127 G++ + + + + E + S ++ + A+ +S LP + Q P Sbjct: 61 GRVLYEYTQRIFSLVNQMQDEFQSLSQLDTGRLVLGASAIMSAYYLPGYMVLFHQRHPGV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVC----ASDEH 183 T + + +K+ G+ + F L L V A + Sbjct: 121 TLDLAVHNSHVIAEKVYRGELEIGFCGSSPS--HPNLRAHFLHREPLIVVAGRKSALAQK 178 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFST-FFVSSMSELLKQVALDGC 242 + P + + + + + H+ F E+ KQ+ ++G Sbjct: 179 DGPVCADDLLAHPFILREQGTRVTNKVQEWFKTHAGRPERPSFMTVDNMEVAKQLVINGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELEIV 301 G+ LP YA E+ +G+L L + + + Y R++ F L EL + Sbjct: 239 GVTALPRYAAALELAAGQLTQLRLESFDLHVNYSLVYMEGQRLSRTVTHFLALLFELGVP 298 Query: 302 L 302 L Sbjct: 299 L 299 >UniRef50_P96725 Uncharacterized HTH-type transcriptional regulator ywqM n=3 Tax=Bacillus RepID=YWQM_BACSU Length = 293 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 15/296 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L F+T + NF+ A N +Q + + +I++LE+ IG LF R L L+E Sbjct: 1 MELKQLITFITAAEHVNFTLTAKMLNYAQSSVTSQIKSLEEEIGTPLFERLGKRLILTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 GK F S + ++ E + +KI A S LP II + F Sbjct: 61 GKTFKSYAQKIIALTEEAKMATNQVRET-TGTLKIGATESQCTYRLPPIIKEFKQAFPQV 119 Query: 129 --WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH--- 183 I ++A ++L +GQ D F D + +E L + ++ V A+D Sbjct: 120 KLIFKPYISNEQAKEQLLQGQLDITF-ILDVNRMEDALHVESLIQDEIKMVAANDHPFPA 178 Query: 184 --GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 L +L LL L L FVS E +KQ + G Sbjct: 179 DLPVTLKDLQNET--LLLTEDGCSYRTLFENNLHDSGIYPNKLEFVS--IEAIKQCVMAG 234 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 GI LPE ++ +I +G++ LN A+ + M+ + F R+ Sbjct: 235 LGIGILPEMTVKDDIAAGRMKELNWQSDCPVFTQLAWHKDKWMSAPLKAFIDLTRK 290 >UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteria RepID=Q7MF54_VIBVY Length = 307 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 12/289 (4%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F+++ +C +FS AA ++++ A S+RI LE +G L NR L L+E G+ ++ Sbjct: 8 LPIFVSVVECGSFSSAAKQLHLTKSAVSKRINHLEDKLGSRLLNRTTRKLSLTEAGERYY 67 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAID 135 L + + + ++KI A + + + +IS+ + + Sbjct: 68 EYAAQALNLARQGVDAVTELQGEPRGRLKITAPMTFGVLHVAPLISEFLSRYPKVEVDLQ 127 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH------GEALFN 189 +++ + L G+ D L ++ RL + +CAS ++ + Sbjct: 128 LEDQMVDLVAGRFDLGIRIGH--LPDSNLIAKRLAPCRTV-LCASPDYVSRMGSPSKPAD 184 Query: 190 LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPE 249 LAQ + +Y R +N+ ++ F+ + SE +++ L G GIA +P Sbjct: 185 LAQHNCLRYSYFRGGNEWLFLNQ--GNEYKVLPKGNFIVNNSEAIRRALLAGIGIAQMPT 242 Query: 250 YAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELRE 297 + I +E+R KLV L + + YA + P+ F L E Sbjct: 243 FIIGKELRDRKLVNLMPEYQLPQHFLYAVFPERKHMPLKVRMFIDFLNE 291 >UniRef50_Q1QWD8 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWD8_CHRSD Length = 306 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 77/298 (25%), Positives = 140/298 (46%), Gaps = 13/298 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +WL DF+ L + R+FS+AA ++NV+QP FSRRI+ LE+ +G L NRQ PL L+ Sbjct: 1 MEIRWLEDFIVLARERHFSRAADAQNVTQPTFSRRIKLLEEEMGTTLINRQTLPLSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ--MPPLFT 128 G+ F + + +++ L+ + R+I +AA SL ++P + + + + Sbjct: 61 GEEFLALCEQITERVRLTRDRLQSIAADEARRILLAAPQSLLSNVVPGWLERHDLAHCVS 120 Query: 129 WAIEAID--VDEAVDKLREGQSDCIFSFHDE-----DLLEAPFDHIRLFESQLFPVCASD 181 + A + + + L G+ D + DL + + L E QL PV A D Sbjct: 121 PYLRATSWLIGDYLHGLERGECDLALCYWPRGRIALDLDVSELTFLTLGEEQLVPVSAPD 180 Query: 182 EHGEALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSELLKQV 237 G F L + PL+ + M + L R E + +T S + ++++ Sbjct: 181 GTGRPRFALPGTRRQPQPLIAFHPRGLMAAALEAHLHRQPEPVYLTTLNESVQATNIREL 240 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G G+ W+P+ +++ +++G+LV +P+ Y +P W++L Sbjct: 241 VTQGYGLGWIPQRSVRTAMQNGELVRAGDARWDVPLDIRLYARRDSRHPGLPGLWQQL 298 >UniRef50_Q12HA4 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12HA4_POLSJ Length = 300 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL DF+ L + R+FS+AA R+V+QP FSRRIRALE G +L NR PL L+ Sbjct: 1 MDHKWLEDFIVLARERSFSRAAELRHVTQPQFSRRIRALELWAGADLINRASMPLGLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP---LF 127 G+ L A +R + +A +LS +P ++++ F Sbjct: 61 GEELLPVAHRAAASLNDARARIRHARGSLD-WVTLATGRTLSRTAVPDWLARVKRSAGEF 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL----EAPFDHIRLFESQLFPVCASDEH 183 I + E L +G +D + SF L E F+ I L +L V A Sbjct: 120 RLRILTGSIHEGATALEQGAADFLLSFTHPRLPLLLDEQTFEGITLGTDELVAVSAPRGD 179 Query: 184 GEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMSELLKQVAL 239 G+ L + P+L Y+ + +++ L+R S EL T S +E L + AL Sbjct: 180 GQPRHALPGTDRHPVPVLGYAPTLALSQILQDGLSRSSRELHLHTVTESDFAESLHEQAL 239 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 G G+AWLP + ++RSG+LV + + + YR + N + +R W Sbjct: 240 QGVGMAWLPRGLVDGDLRSGRLVEADGKGAAVRFEIRLYRPRSPRNDLVQRIWS 293 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 119/294 (40%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + F T+ ++FS AA + +SQPA S I+ALE +LF+R + ++E Sbjct: 3 LSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTITEA 62 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+I + +L ++ ++ + + + I A+ ++ ++P I+ P Sbjct: 63 GRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHPQV 122 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + ++ V+ + + + D + + + + +L V D Sbjct: 123 RALLQVTNTEQIVNLVLKQEIDLGL--IENQVNKTELVAKPFLQDELIIVIPPDYPLSEH 180 Query: 188 FNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVALDGC 242 ++ PL+ + S ++ L + + +E +K+ G Sbjct: 181 QFISMEDLVALPLVMREQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEAVKEAVEAGF 240 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWREL 295 G + ++A+Q+E++ G LV + ++ + + Y Y + V E F L Sbjct: 241 GTTIISKWAVQKELKLGTLVPVRFKDISLFRKFYLIYHRDKFQTTVVEEFITFL 294 >UniRef50_A6UJW6 Transcriptional regulator, LysR family n=4 Tax=Rhizobiales RepID=A6UJW6_SINMW Length = 313 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 86/309 (27%), Positives = 148/309 (47%), Gaps = 23/309 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DF+TL +FS+AA RNV+QPAFSRRI+ LE +G L +R P +L+ Sbjct: 1 MEIKWLEDFVTLADTSSFSRAAELRNVTQPAFSRRIKQLENWLGATLISRATMPAELTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL---- 126 G+ F + ++ + LR ++ I+ AA H+L++ P + ++ Sbjct: 61 GRNFLPVAQESIRTFYAAREVLRLPNEP--GLIRFAALHTLTVTFFPRWLKKLEAAGGTF 118 Query: 127 -FTWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASD 181 + + ++ +D L ++D ++ + L F + + +L P+ A++ Sbjct: 119 STSLIPDRGGIEANLDALIGDEADFFLTYAHAEVPFHLARGQFASLTVAHDRLIPLVATE 178 Query: 182 ----EHGEALFNL-----AQPHF--PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSM 230 H + NL AQP P L+Y NS+ G ++R L R T +++ Sbjct: 179 IVLSGHAQPGRNLLDRAVAQPRLAIPYLSYGLNSFFGVALSRLLLRRPPFRRRTTHENTI 238 Query: 231 SELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDE-LVIPIQAYAYRMNTRMNPVAE 289 S L +AL G G+ WLPE ++E+ +G+LV + DE + ++ YR N E Sbjct: 239 SAGLMNMALTGAGLCWLPESLAREEMEAGRLVPASADEGWNLDLEIRLYRHAAGRNRKVE 298 Query: 290 RFWRELREL 298 W+ ++L Sbjct: 299 DLWQTAQQL 307 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 100/283 (35%), Gaps = 12/283 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +L+ F + + +F++AA +QP + +++ LEQ+ G LF R L+L++ Sbjct: 1 MELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ R L++ + ++ I I +L+ LP + P Sbjct: 61 GEALLPYARELIRLYGESKEVIK---HQTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQV 117 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + E V ++R+G D F D + + E +L V Sbjct: 118 DLVLRTAGEAEIVQQIRDGYLDFGIIF-DRPCTDPELVTHVIREEELVVVMPPAHRFTTA 176 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L PL+ ++ S E +KQ G G+ Sbjct: 177 TALTVHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQ-RIACQFSNPEAIKQCVRCGLGV 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNP 286 A LP A+Q+E+ G L + P Y ++P Sbjct: 236 ALLPVMAVQRELAEGVLTAIPFQSDKPPFSIQLVYHKKKWLSP 278 >UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C6CZP2_PAESJ Length = 300 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 126/297 (42%), Gaps = 15/297 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L LT+ K +F +A N++QPA S +I+ LE+ L +R P+ L++ Sbjct: 1 MNISQLETLLTISKTMSFRKAGELLNLTQPAVSAQIKTLEEEFKTVLIDRN-QPVTLTDH 59 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK+F +L +E +L + Q I + S+++ +LP ++S PL Sbjct: 60 GKVFLEHAERILAVVEELKQKLSDLNAIPQGHIVLGTTSSMAIQILPRVLSYFQDQYPLI 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I + + + + G D ++ E + P + F + AS H + Sbjct: 120 KTTIHTMPSSQVLASVENGSVDMGITYISE---KNPNMDSSILYYDSFVLVASPAHPLSQ 176 Query: 188 FNLAQ----PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 +P + + ++ R +++ + + + + S SE +K++ G Sbjct: 177 VAHTTIDMIKDYPFIMLAPDTLGRRFLDQIFKK-NNIQPNIIMELSSSEEVKRMVEINLG 235 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDEL--VIPIQAYAYRMNTRMNPVAERFWRELREL 298 IA + + +I E+R G L ++ EL P+ Y+ +N ++F +L+ + Sbjct: 236 IAVVSKLSIANELRLGSLKIIKVTELEPYHPVAV-VYKSGRYLNTAMQQFLSDLKGM 291 >UniRef50_Q0TQC8 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=Q0TQC8_CLOP1 Length = 294 Score = 209 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 123/299 (41%), Gaps = 14/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F KC N ++ A S +SQP+ S+ I LE + V+LF+R L L+ + Sbjct: 1 MNFRKLKIFFETAKCLNMTKVAKSMYISQPSISQAIAELESDLDVKLFDRIGKRLYLTHE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+++ R +L E + +R + + KI I A+ ++ + +LP +I + Sbjct: 61 GEVYFEYSRRILNLYEEANSTIRSSKEGQKGKIVIGASTTIGIYILPELIKEFNELHKNI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD-----E 182 ++ + + + E + D + + + + + +L + + + Sbjct: 121 EISLIIENTQLIEELIMENKVDIAL--VEGYVKSDELEVFDIGKDELIFIANPNNPIFSK 178 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 L +L F + S +I L +++ + +E + +V G Sbjct: 179 DKITLKDLEDEKF--IMREPGSGTREIIENYLINKGC-NYNVYMELGNTEAIVRVVETGL 235 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELRELEI 300 GIA + AI + I G + + D++ + Y Y + ++ E F +++ +I Sbjct: 236 GIACVSCKAIDERINEGLIKEIKIDDIKVSRDLYLIYHKDKFISKNLEIFIDKIKNSDI 294 >UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=A0LJJ0_SYNFM Length = 308 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 123/295 (41%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + +F++AA + +Q + S +I+ LE+ +GV+LF+R +QL+E Sbjct: 1 MELRQLKTFRVVANLLSFNKAAGQLHYAQSSISAQIQILEEELGVQLFDRLGKRVQLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G +L ++ + + ++ + I +L + LP+++ + P Sbjct: 61 GVRLLQYANKILDLVDETNSMVNRVNE-PTGSLTIRIPETLGVRRLPAVLREFHSRFPRV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA- 186 ++ LR+G +D F E + A D L + V A D A Sbjct: 120 RLNFITCALEGLDKDLRKGITDLAF-LLAESINAADLDMATLGFEPVVLVAAPDHPLAAK 178 Query: 187 --LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + +L + +++ + L + F+ F S E++K + G GI Sbjct: 179 RKVHTRDLTGSTILLSRVDCSYRKVLEQILEQEEVTRFN-RFEFSSVEVIKHCVMAGVGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELREL 298 + LP A+ +++ ++VVL E I + + ++P + F +++ Sbjct: 238 SVLPSIAVAEDVARKRMVVLPWSEGGIQVAVLMVWYRERWISPTLQAFMDVTKKV 292 >UniRef50_Q5WD37 LysR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WD37_BACSK Length = 290 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 113/293 (38%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ F +AA S +Q + + I+ LE +G LF+R + L++ Sbjct: 1 MELRHLNTFKTIVDTGGFKKAADSLGYAQSSVTNHIKELENELGYLLFDRLGKQVVLTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F ++ + + D A ++ I + SL L LP+ I+ P Sbjct: 61 GKRFLPYALEIIDLYAKSKEAVLNTVDLA-GELTIGVSESLLLYWLPTFITNFTKTYPKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ ID +L++G+ + ++ L V +D + Sbjct: 120 ELTLKLIDYQHLTTQLKKGEIEAAILVESNQWQPKALSFEKISSDTLILVETADHAFRNI 179 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 +L +I + L+ ++ E +K+ G G ++L Sbjct: 180 PET------MLVTEYACSWRPIIEQYLSEEAQFGMKKI-EFPSIEAIKKCVECGLGQSFL 232 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELRELE 299 P++A++ + G L + + PI Y AY N ++ E F LRE + Sbjct: 233 PQFAVRDALAEGTLKEVPTKAPIEPIGIYAAYHKNKWVSRKLETFISALREQK 285 >UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VX33_MARMS Length = 293 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 126/294 (42%), Gaps = 16/294 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 I+ L F+ + + +FS+A V+QPA S+RI +LE ++GV+LF+R +QL+E Sbjct: 2 IDIAELLTFIKVAETSSFSEAGDQLFVTQPAVSKRIASLESSLGVKLFDRIGRQVQLTEA 61 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 G + R + + L+ + +++I+ H + L LP + + F Sbjct: 62 GIRLLPKARKMAEDLQDIKRSMTLQMQDVSGELRISTGHHIGLHRLPKSLKRFQENFPNA 121 Query: 129 -WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 IE + +EA + +G+++ + + + ++ L V + D H A Sbjct: 122 QLEIEFVQSEEAYQDVLKGRAELGI-ITLSNKENPLIESLPIWSDPLTCVVSKD-HPLAR 179 Query: 188 FN----LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 +N + + ++N++ ++ + + L ++ E+L + G G Sbjct: 180 YNNVSLIELAQHACVLPNKNTFTRQIAEQAFGKQG-LKPQVRMNTNNLEILAMLVHIGWG 238 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELR 296 + LP + + KLVVLN +L + + R ++ A F L+ Sbjct: 239 WSLLPSTLVDE-----KLVVLNLPDLNVERKLGVIHHKQRTLSRAAVAFIELLK 287 >UniRef50_Q8EL24 Transcriptional regulator (LysR family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EL24_OCEIH Length = 291 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 125/296 (42%), Gaps = 13/296 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+ L + +NF++ A R++SQP S I+ LE L R + L+ + Sbjct: 1 MHMEELETFIVLAREKNFTRTATKRSLSQPTVSVHIKNLENEFATSLIQRTTKRVHLTPE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G++F+ + Q + L A I++ A+ ++ LLP +I+ + Sbjct: 61 GELFYEHALKIWNQYQQLQEHLYQKKQTASGLIRVGASFTIGEYLLPEVIAILQKQYEQL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + + + ++ +D +R + D S + +D+L+ F E +L VC+ + Sbjct: 121 DFYVTIGNTEKIIDSVRRLEVDIGLVEGSNYTKDVLQTSFK-----EDRLVIVCSPEYET 175 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 H + S + + L + +E+ + V S ++ +K +G G+ Sbjct: 176 NFKNLADLHHHKWVIREEGSGTRQYFDH-LVQSNEIQVKSTLVISSTQGIKNSVTNGLGL 234 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELE 299 A L E I++E+ G L ++ + L Y +++N + L +++ Sbjct: 235 ALLSEATIKEELAHGTLKMVPIESLYEKRDFSYVLTKGSQLNRNTQLLIDTLTKID 290 >UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N6N4_9GAMM Length = 300 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 117/300 (39%), Gaps = 20/300 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T+ L F+ + + +FSQAA +++QPA S+RI LE + +LF+R L+ Sbjct: 1 MDTQSLQAFIAVAETESFSQAAHRLHLTQPAVSKRIAMLEDTLDCQLFDRLPRKATLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ + +H++ +L EL S ++I +H + L LP I+ + P Sbjct: 61 GEALMPKAKHIVSELLEIKTELASLSGDVSGTLRIGTSHHIGLHHLPHILRKFHSTYPQV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 A++ + + A + L G+ D F+ + + D ++ L VC+ Sbjct: 121 KLAMQFLGSEAACEALANGELDIAFATLPLE-QDPKLDMQAIWRDPLTFVCSHTHPLSKQ 179 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRH---------SELSFSTFFVSSMSELLK 235 N+ + N+ +I + S + +SS E +K Sbjct: 180 KNIHLKDLTQHEAILPEPNTVTFEIIEAAFKKEKLSLQAALPSRYRETISMMSSYMETIK 239 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 +A G G A LP++ Q L+ LN R + + F L Sbjct: 240 MMASVGLGWAVLPDHMAQD----KDLIRLNLGIHPYRNLGVLQRKGKTLGSAGKAFLAIL 295 >UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RU53_9GAMM Length = 297 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 128/296 (43%), Gaps = 15/296 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T+ L F+ + + +FSQAA +++QPA S+R+ LE+ +G ELF+R + L+E Sbjct: 1 MDTQNLKAFILVAETGSFSQAAEKLHLTQPAVSKRVALLEEQLGTELFDRIGRIISLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 GK Q + + + L++ +R + ++++A +H + L LP ++S P Sbjct: 61 GKALLPQAKSVERALDAAEQSVRDLAGDVAGQLRLATSHHIGLHRLPPVLSSFSQTFPEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---- 183 I+ +D ++A + + +G+ + + + +++ L + A D Sbjct: 121 HIDIDFMDSEQAYELISQGKVELAVVTLAPK-EQTNVISLPVWQDPLDFMIAKDHELLRS 179 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 G A P + N+Y G++I R H L ++ E ++ +A G G Sbjct: 180 GNTPDLQAMSRHPAILPGLNTYTGQIIKRLFDSHG-LQLEVSLATNYLETIRMMASVGLG 238 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELREL 298 LP + + + ++ + I Y ++ A+ F + L Sbjct: 239 WTILPRSMRDESLAT-----IDVASVAIERTLGLIYHRGRSLSRAAKAFIESTQAL 289 >UniRef50_B7HRA4 Transcriptional regulator, LysR family n=70 Tax=Bacillus cereus group RepID=B7HRA4_BACC7 Length = 290 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 12/296 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + F + K +FS+AA + +Q + ++ALE + + LF+R + L++ Sbjct: 1 MEMRHVKTFCAIVKYGSFSKAAHALGYAQSTVTAHMKALENDLHIPLFDRLGKKVLLTKA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G FH LL E E+ +D + + I + SL++ LP ++ P Sbjct: 61 GHQFHPYALELLAIYEKA-QEIPQNTDQLEGTLSITSNESLAVYRLPQLLRTYKQKNPKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE---HG 184 +E ++A+ KLREG++D +F E + F R F ++ F H Sbjct: 120 NIVLETNTNEQALQKLREGETDVVFIIG-ESIEHNDFIT-RTFSNETFGWILPPHYCIHS 177 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L F ++ +++R L + + T F +S E++KQ + GI Sbjct: 178 NPFYLLKDTQFIFT--EQSCGYRPMVDRFLRQSGNIPAKT-FETSNVEVIKQSVMCELGI 234 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 + LP +Q+ + +L + + Y + ++PV + F L+ +++ Sbjct: 235 SILPYIVVQESCQKEQLCFQPIETPTVIQSHVIYHKSRWISPVVQSFLSLLKVMKV 290 >UniRef50_UPI000174499E transcriptional regulatory protein, LysR family n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174499E Length = 302 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 134/302 (44%), Gaps = 15/302 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++++ L F L + +F+QA + +++Q A S IRALE+ +G LF+RQ + L+ Sbjct: 6 LDSRQLRAFTVLAREGSFTQAGRALHLTQSAISHAIRALEEDLGCMLFHRQGKRVLLTHH 65 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ + +Q+ A L + +I+I + + S +LP+++ + PL+ Sbjct: 66 GRELLRHAEEIQRQMALARASLGALDQNPRGQIRIGSTPAASQFILPTVLREFKDSFPLY 125 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA- 186 + +I + + + +L +G D D+ D LFE +L + AS H A Sbjct: 126 SISIVPGETPDTLQRLEQGVLDLAVCLRPRDVAR--VDCRPLFEDELIFL-ASPLHPWAQ 182 Query: 187 ----LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 +LA + + SRNS +I + + +F +E +K++ G Sbjct: 183 QHPKTKDLAGETY--IISSRNSSTFEMIGEYFLKLG-VRPKSFIELGNTEAIKELVKLGL 239 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRELRELEIV 301 G+A + + EI+SG+LV L I Q A+ ++ + F ++ Sbjct: 240 GVAMVAAWTAPAEIKSGELVSLPLVRSRIKRQWVVAHMKQKPVSLAEQTFMTLCEQVGEQ 299 Query: 302 LS 303 L+ Sbjct: 300 LA 301 >UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n=4 Tax=Bacillus RepID=C3BJ72_9BACI Length = 298 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 10/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + F++A +Q + IR+LE+ IG LF+R + L++ Sbjct: 1 MELRHLKTFIIVAESGGFTRAGEQLGYTQSTITNHIRSLEEEIGNPLFDRLGKKVILTDV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ S +L+ L + I+I A SL + LP+++ + P Sbjct: 61 GEHMLSYAHKILELSNEALES-SQMNGKFSGTIRIGANESLMIYRLPAVLYEFKRKYPQV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + E ++L+ G+ D H E L H L + ++ + Sbjct: 120 HIILQPSESQELHNELKSGKFDFALFTHPEQLGTDIVTHS-LVQEKIVLIAPPKHPLTKK 178 Query: 188 FNLAQPHF--PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 +++ +L + L+ R + ++ S S+ E +KQ + G GI+ Sbjct: 179 VSVSPADLEGEMLLLTEPGSYRDLLERRIKEDG-INCSHIHFWSI-EAIKQTVMCGLGIS 236 Query: 246 WLPEYAIQQEIRSGKLVVLNRDEL-VIPIQAYAYRMNTRMNPVAERFWRELRE 297 +LP +++EI GKL VL AY + + P ++ + + Sbjct: 237 YLPFITVKEEIEQGKLSVLPWTYSKDFVTTELAYHKSKWLTPAMKKLIEMIEK 289 >UniRef50_A4G228 Transcriptional regulatory protein, LysR family n=18 Tax=Betaproteobacteria RepID=A4G228_HERAR Length = 367 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 17/299 (5%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 + N + L F T+ + +FS+AA +++QPA S +++ LE G+ LF + + Sbjct: 44 TVKNATLRQLKVFETVARLLSFSRAAEELHLTQPAVSTQVKKLEDHAGLALFEQLGKKIY 103 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--- 123 L+ G R ++QQ + + K+ +A S P ++ + Sbjct: 104 LTPGGTELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAVI-SAGDYFFPRLLVEFARS 162 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDE---DLLEAPFDHIRLFESQLFPVCAS 180 T + + + +++L +D D + PF V A Sbjct: 163 HQGVTLNLSVHNREGLLNQLANNLTDLAIMVRPPTDMDTINEPFAPHPY-----VIVAAP 217 Query: 181 DEHGEALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQV 237 D H + N+ H P + + S + + + +E +KQ Sbjct: 218 DHHLVSKKNIPMSTLIHEPFVVREKGSDTWHSMEDGFGSRID-DLNIAMEIKSTETIKQA 276 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWREL 295 + G GI++L + I E+++G L VL+ + + + Y +R N R+ PVA+ F L Sbjct: 277 VIAGMGISFLSAHTISMELQAGSLTVLDVEGFPVMLNWYVVHRKNKRLPPVAQAFRNFL 335 >UniRef50_Q5WIP7 LysR family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WIP7_BACSK Length = 293 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 71/297 (23%), Positives = 123/297 (41%), Gaps = 16/297 (5%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + N+E F T K +NFS+AA S ++QP+ S I+ LE +GV LF R + L Sbjct: 1 MTNLE--HYRIFYTTAKEQNFSKAASSLFITQPSVSHAIKQLETQLGVSLFIRHSKGVFL 58 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLL----PSIISQM 123 + +G + +S I+ +E+ L+ I IA++ S+ L PS + + Sbjct: 59 TTEGNVLYSYIKQAFAHIETGERHLQSLKALESGSITIASSDSICKHYLLPRVPSFLKRW 118 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD-- 181 P + + + KL +G+ D + I F S CAS Sbjct: 119 -PKLDIKFQHGSTPDIMKKLEQGRIDIGIVHLP---INEKDVEITPFTSTTCLFCASPTY 174 Query: 182 --EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 H +PL+++S S + R + + +FS ELL + A Sbjct: 175 KTLHNGTHSLTELTRYPLVSFSAGSSTRSFLERLFQQQGQ-TFSPELEVGSIELLIECAK 233 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWREL 295 G GI ++ + I++E+ G+LV + D + + + ++ A RF+ L Sbjct: 234 LGMGIGFVAKELIKKELEQGELVEIPVDIAIPTREIALITKKAAPLSIAARRFYSHL 290 >UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HY10_9BACT Length = 303 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 122/301 (40%), Gaps = 11/301 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L FL + + ++F+QA ++QPA S ++++LE+ + V LF R + L+E Sbjct: 1 MTNDQLKVFLKVAEYQSFTQAGEVLFLTQPAVSLQVKSLEKDLKVSLFERTGKKILLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP---LF 127 G+ R ++QQ+E +R D Q ++I A+ ++ LLP +++Q Sbjct: 61 GRKLLPLARSIIQQMEEAREVVRPLEDMPQGHLRIGASMTIGTYLLPPLLAQFLRANSRI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 T ++ + + + L+ + D + + + + + S H Sbjct: 121 TASLAVANTHQILHDLKASEIDLGLIEGEPTRTQGISLDRKFLDHDRLVLIDSLNHPLLP 180 Query: 186 ---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALD 240 + A P + S ++I R L + F T E +K++ Sbjct: 181 SSGPVSLDALRKVPFIGREPGSGTRQVIERELLEKNLPPDSFETVMTVDNPEAIKELVAL 240 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 G G+A++ ++ SG L + ++ + + + +P A+ F + L + + Sbjct: 241 GSGVAFISSLCLRPH-ESGLLRTVAVEDFSPVRNLWIFVPQKKTSPPADLFLQLLVKERL 299 Query: 301 V 301 Sbjct: 300 P 300 >UniRef50_C8WTC6 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WTC6_ALIAD Length = 304 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 74/294 (25%), Positives = 122/294 (41%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L+ F + + R+F++A+ N +Q + S +I+ALEQ +G LF+R +QL+E Sbjct: 1 MDFKQLHTFAVVARERSFTRASALLNYAQSSVSAQIQALEQELGTPLFDRIGRSVQLTEV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ + LL Q+ES L + G + + A SL LP ++ P Sbjct: 61 GQKVLPLVHDLL-QMESELRSIAKGGYEPSGTLVVGAPESLIAYRLPPALAVFHQRYPRV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV-----CASDE 182 A E L G+ D ++ A L ++ V AS+ Sbjct: 120 HLQFRADSCAEHRAALARGEIDVAL-LLEQSAPPAGLAFQTLTPERIVLVAHPKIAASNP 178 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + L+ S+ R + + + E +KQ A+ G Sbjct: 179 SASTPSLIESAVLLLVEASKGGASYREVFERQMMQMGIRIQRSMEFASVEAVKQCAIAGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 GIA LPE +QQE+ +GKL L ++L IP A+R M A + + +R Sbjct: 239 GIALLPEMVVQQELDAGKLTRLPWNDLKIP-TYLAWRDGRWMPQAAREWIKCVR 291 >UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Bacillus RepID=A8FC52_BACP2 Length = 291 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 130/297 (43%), Gaps = 16/297 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + + F+ + + + ++AA + ++QP+ S RI++LE+ + ++LF+RQ L L+E+ Sbjct: 1 MNIENIEAFIYVCQLGSINKAAEALYLTQPSVSARIQSLEKELDLKLFDRQRNKLSLTEK 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 G+ F+ + +L + L+ + + I A S+S LLP+I+ + + Sbjct: 61 GEQFYPHAKKILHSYQEAKHSLKQTMIPYE--LTIGCASSISNNLLPNILPALKEKYENL 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I + V K+ Q D + + I +F + + +L Sbjct: 119 KVKIVTGHSKDVVQKVINNQVDFGIVRTE---THPQIESIPIFSDPIGLFVPTYHPLASL 175 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 N+ P + + S+ +++R L + + ++ + E K + L G G+ Sbjct: 176 DNINMKELEEQPFIFFDYGSFDWLMLHR-LFQKNNITPNISIEVDHMETAKNLVLQGMGL 234 Query: 245 AWLPEYAIQQEIRSGKLVVLNRD---ELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 ++LP + ++ E+ G L ++ D I I+ + Y+ + ++ + EL Sbjct: 235 SFLPHHCVRNEVEQGTLKQISIDPSIHFNINIE-FIYKKGKSKSVFIDQLKQFFHEL 290 >UniRef50_C8W3M6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3M6_DESAS Length = 293 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 116/292 (39%), Gaps = 6/292 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+T+ K +F++AA + +Q + + ++ ALE + +LF R + L++ Sbjct: 1 MEIRQLKAFVTVAKQHSFTRAAELLDYAQSSITAQVSALENKLNTKLFERLGRQVTLTQN 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ +L+ L S EL S + + + A + + LP ++ + P Sbjct: 61 GEKLLPYAEKILK-LNSEAIELVSSSPVPRGSLSVGAMETSCIYRLPKLLQEYRKLFPNV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + +E + L+E + D F F +++ L + + V A+ Sbjct: 120 DLTLVNGYPEELIHSLKENKIDVAF-FTGQEITNPDLVSETLLDEPIVLVSAAGHPLSKK 178 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 + S R R + + + + + E+ K+ ++G GI L Sbjct: 179 APVITLDLQGETIVLCSCCYRATLRKIFENKGIQVGSILKFANIEVRKRCVINGLGITIL 238 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIP-IQAYAYRMNTRMNPVAERFWRELREL 298 P ++ E+ G LV L + I AY + ++PV F E+ Sbjct: 239 PRVTVEAELNQGTLVDLGWNSSDFNIITQVAYHKDKWVSPVLRSFLELAHEI 290 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 113/292 (38%), Gaps = 9/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F+T + S AA +++QPA S++++ALE G+ L R+ ++L+ Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+I + R + L EL + + ++ + A+ + +LP +I P Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D E V +L+EG+ D + + RL +L + Sbjct: 121 EVILTIADTQEVVQRLQEGEIDLGVVGAAGGRGKN-LSYSRLAGDELVLIVPPGHRLAGA 179 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 ++ PL+ S R++ L +E + G Sbjct: 180 TAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGL 239 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRE 294 GI+ + +A+++ ++ G+L V+ + + Y R ++P AE F Sbjct: 240 GISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQPLSPAAEAFVNF 291 >UniRef50_C4GDC9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C4GDC9_9FIRM Length = 314 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 66/301 (21%), Positives = 127/301 (42%), Gaps = 19/301 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+ L K NF++A+ +SQPA S+RI++LE+ +GV LFNR + L+ + Sbjct: 1 MDITKLNSFIVLAKKGNFARASELLYISQPALSKRIQSLEEELGVPLFNRIGSRSYLTVE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ F + ++ + +LR + + A + + + ++PS IS+ P Sbjct: 61 GQNFLRYAQQMVSTYNLAVEDLRQINGLETGTLNFGATNFIGVYIMPSFISRFHKKYPKI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEA----PFDHIRLFESQLFPVCASDEH 183 + + +D L + Q + + D L + + + +L V + Sbjct: 121 HINMIINNSRTILDMLHKNQLEFA-AISDYILRDKTSRDQYLSCPFVKDRLKLVVG---N 176 Query: 184 GEALFNLAQPHF------PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQV 237 LF+ ++ ++ S + + RHS F V S E +K+ Sbjct: 177 AHPLFSRGHCSLKDVENELYISKTKYSSQNQFLEEIFQRHS-FDFKNRMVISNQEAVKEC 235 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 ++ G++ L ++ QE+ +L L+ DE I Y + + P A F LR Sbjct: 236 VINNIGVSILSTRSVTQEVLHQRLATLSFDEFEIERNIQYTCLKDRHLTPAARIFLDFLR 295 Query: 297 E 297 + Sbjct: 296 Q 296 >UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=Firmicutes RepID=B8G0Z2_DESHD Length = 303 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 114/294 (38%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F + + ++FS+AA +SQPA S IR LE G +L R + L+ Sbjct: 1 MIIETLEIFRKVAEEKSFSKAAEDLFLSQPAVSSHIRNLENEFGTKLIYRSSKHVDLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ---MPPLF 127 G+I + Q ++ Q + ++ ++I A+ ++ +LP ++SQ P Sbjct: 61 GEILYEQACRIINQYQEAKEKINQIQSIVSGNLRIGASFTIGEYILPELVSQTARRYPNL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + +E LR+ + D + + F ++ + + Sbjct: 121 NINVTIGNTEEIAQGLRQNRLDVAL--VEGKITGKEFILEPFMVDEMVLIALPSHPLAKI 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + S +R ++ + S + +K L G GI Sbjct: 179 KGVTAQDLEDQVWILRETGSGTREFSDR-FIETLKIPVKHSYGFSSNTGVKAAVLSGLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ---AYAYRMNTRMNPVAERFWREL 295 A + + IQ+EI++G++ ++ +E + + A T +E F EL Sbjct: 238 ALVSKLIIQKEIKAGEIAIIPLEENLPRLSREFLIARGQQTYFTKASEAFLMEL 291 >UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9N7_9FIRM Length = 291 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 124/297 (41%), Gaps = 16/297 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + FL + + +FS+AA SQ A S ++ LE + LF+R ++L++ Sbjct: 1 MELRTINTFLHIAELHSFSRAARELGYSQSAVSAQVAQLEAELETPLFDRVGKTVRLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ F + R LL E A L+ + +++A A S+ LP ++ + P Sbjct: 61 GQTFLTYARSLLATAEQAKAALQ-PARQVSGTLRVALADSVCSTFLPDLLQRYHALCPQV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + DE + L Q D ++ D+ LL+ F L + P+C G L Sbjct: 120 ELVLRTATDDEMLQMLGSNQIDLAYTL-DKPLLQPSF---VLAVDEPEPICVVAPAGHPL 175 Query: 188 FNLAQPHFP------LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 A+ L R +++ + L+ F + LL Q+ G Sbjct: 176 AGQAEVTLQELAGQEFLLTERGMSYRDALDQCMAAQG-LAIKPFLELGSASLLCQMVEHG 234 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELRE 297 G+++LPEY +Q + +G L LN + ++ Y + + P + F +++ Sbjct: 235 MGLSFLPEYIVQNALAAGTLARLNVPACRVEMRRQLFYHRDKWLTPQMKAFITLVQK 291 >UniRef50_B6A503 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A503_RHILW Length = 297 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 143/296 (48%), Gaps = 14/296 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T WL DFL + + +F++AA RNVSQPAFSRRI+ LE IGV LF R + L+ Sbjct: 1 MDTDWLVDFLAVIESGSFTKAANQRNVSQPAFSRRIQTLENWIGVPLFERGTHSVTLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 G+IF +Q + +++ + + S ++ +++ H+LS L+PS++ ++ FT Sbjct: 61 GEIFRTQAQEMIELVNVSRTRALAASTRSRNSVQLVCTHTLSFTLVPSLLQRLLRDFTEQ 120 Query: 131 ----IEAIDVDEAVDKLREGQSDCIFSF----HDEDLLEAPFDHIRLFESQLFPVCASDE 182 I A + + V +R+G S I HD D + + L VC +D Sbjct: 121 PAVTISACTMADCVRSIRDGNSSFIVYHYHNDHDCDFGGKRMRSLDIGSEWLTLVCRADV 180 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + + L P + Y S ++++ H + + +++++ + +G Sbjct: 181 Y-DTLAP--GEPLPFIQYGDESAFKKIVHDNPV-HPDRPVVEVYRATLAQTVATAVRNGI 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 G A+ + ++++SG+LV L ++ + I+ +R N ER WR L + Sbjct: 237 GAAYCLRSLVLEDVQSGRLVKLPAPDIALSIRISM--PRSRQNETCERLWRALAQQ 290 >UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPK4_9CLOT Length = 301 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 121/294 (41%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+ + + + ++A+ +VSQP+ S I+ LE + LF+R L ++EQ Sbjct: 1 MTIRHLRTFVIVFQKESITKASEILHVSQPSVSLAIQELENYYHIRLFDRIGKRLSITEQ 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK + H++ + E++ ++ + ++I ++ ++ +LP +I + Sbjct: 61 GKWLYDYALHIVSMFDEMETEVKTWNN--KGTLRIGSSITIGNFILPQLIEEFQKRYREV 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 + + + + D + L E L +CA++ Sbjct: 119 EIKVSVCNTKTIEQYILNNEVDLAL--IEGKTEYEQIQMEHLMEDPLCLICAANSELVKQ 176 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 E + + +P++ R S + +I +L H ++ + S ++ + + GI Sbjct: 177 EKISLIDLERYPMILRERGSAVREMIEESLGYH-QIHHRVIWESVSTQAIIRAVAKKLGI 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 + LP ++ E+ G + L +E + Q AY + P A+ F +E Sbjct: 236 SILPYLLVRDELARGLVKQLQVEEFHLSRQFSIAYHKKKYLTPAAKGFMELCKE 289 >UniRef50_C0Z947 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z947_BREBN Length = 297 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 130/300 (43%), Gaps = 18/300 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + + F+ + +FS+ A +SQP S RI+ALE +G +LF R + L+++ Sbjct: 1 MNMEQMEAFIFVALTGSFSKTADLLYLSQPTVSMRIKALETTMGCKLFQRTGHTISLTKE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G +F ++++ L+ ++ + ++ I+ + +LP ++ Q P Sbjct: 61 GDLFLPYAKNIMHMLQEGQQAIQRSQGDVEGELTISTVFVSAFYILPDLVQQFQQLYPKI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE----- 182 I + +D + + + + + I+L + D Sbjct: 121 KLTILTGHSHQVLDMVLNHEVSFGIA---RAVTHPQINRIQLMPDDMVLAIYPDHPFGFR 177 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 H ++ +A+ L+ ++R S +LIN + H +L + + E++K++ Sbjct: 178 HQVSIEEVARER--LILFNRGSLDWKLINNAFS-HFQLQNNVIMEADNIEVVKRMVKQRL 234 Query: 243 GIAWLPEYAIQQEIRSGKLV---VLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 GIA+LP +AI +++ G+L VLN ++ + Y +T ++ + F L + + Sbjct: 235 GIAFLPRFAISKDLDEGELQEVDVLNLPQINRNFEL-IYLKDTPVHGIMRTFIDFLMQCK 293 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 124/293 (42%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + LY F+ + K + +QAA +V+Q A SR+I LE+ +GV+LF ++ LQL+ Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F + +L LE + E+ D + +I++ HSL + ++P +++ P Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + +G+ D F D L +LF + Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISPFPD-EHEQVCGEVLLTEELFAILPPSHPLAGE 179 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + +S + ++ + + + F +E ++ + G G+ Sbjct: 180 QEIDLIQLKEDTFVMFSEGYSLRPIV-WEACQEAGFTPKIGFEGEETETIRGLVAAGMGV 238 Query: 245 AWLPEYAIQQE--IRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 + LPE A+ ++S K V + + I +R N +M VA+ F L Sbjct: 239 SLLPEMALYHAGVLQSAK-VRVRTPNVTRNIGI-IHRSNEKMPLVAKVFHGFL 289 >UniRef50_A0Q2F6 Transcriptional regulators, LysR family n=16 Tax=Clostridiaceae RepID=A0Q2F6_CLONN Length = 297 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 125/291 (42%), Gaps = 8/291 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + ++L F KC + S+AA + +V+QP S +++ LE+ +GV L NR ++L+E+ Sbjct: 1 MNLEYLQSFYMTVKCNSISKAAKALHVTQPGLSMQLQNLEKELGVSLLNRSNKGVELTEE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 GK+ +L + +L+ + Q ++ I + S+ LP I + Sbjct: 61 GKVVFDYANTMLSIQGNIERDLKSLQEEQQ-RLIIGSCKSVGEYALPCSIYTFKKFNKKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + E ++KLR+ + +D L E + +L V D E + Sbjct: 120 DINLDVSNSSEVIEKLRDHSINIGIIQYDP-LDETQIITKTIISDELVLVANLDNTPEEI 178 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRH--SELSFSTFFVSSMSELLKQVALDGCGIA 245 + PL+ +NS L+ LT+H + + + E +K + G G + Sbjct: 179 SLDEVKNLPLILREKNSGTRYLLENELTKHDLKIEDLNVIYSLNSPEAIKSSIMSGKGFS 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWREL 295 +LP ++QE++ G L + + + Y A+R N + F + Sbjct: 239 FLPRLVVKQELKEGTLKTIKIKDFKVTFDYYIAFRKNYSFTEFEKMFVDFI 289 >UniRef50_A7UH62 Putative LysR family regulator n=1 Tax=Desulfotignum phosphitoxidans RepID=A7UH62_9DELT Length = 313 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 119/304 (39%), Gaps = 10/304 (3%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 MDD + ++ L F LEK + S+ A ++QPA S+ I+ALE GV LF+R Sbjct: 1 MDDSNSKYSDMNVYQLRTFCVLEKKGSVSRTAQELYLTQPAVSQHIKALESFYGVGLFDR 60 Query: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 L L+E GK + + + + S+ + I I A++++ + +LPSI+ Sbjct: 61 VDKKLVLTEAGKTLYHYTGLIFNLINETKRAISDFSELKRGSICIGASNNIGVYVLPSIL 120 Query: 121 SQMP---PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV 177 + P + KL + D + + + +L + Sbjct: 121 GEFKNGFPQINIQVSIDTTRVIEQKLLSNEIDIGI--VEAQVRSSDLVLEHWGAEKLILI 178 Query: 178 CASDEHGEALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELL 234 ++ L ++ P + R S R++ + + + + +E + Sbjct: 179 TSAMHPWTQLKSIKPDMLLDEPFIVGGRGSGTRRVLEEKM-PNVMKKMNVYLELGSTEGV 237 Query: 235 KQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWR 293 K+ + GI+ E + +E++SG+L + D + + Y + ++F Sbjct: 238 KRAVEENLGISICGENTVSRELKSGQLKAIKIDGIELKKNFSIVYLKGKVITLAMKKFLG 297 Query: 294 ELRE 297 L + Sbjct: 298 SLHD 301 >UniRef50_A6LZH1 Transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=A6LZH1_CLOB8 Length = 296 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 124/294 (42%), Gaps = 10/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + F ++ + NFS AA+ +Q + +I+ LEQ + ++LF + + L+ Sbjct: 1 MDIRHFKTFKSIIEEGNFSNAAMKLGYTQSTVTSQIQQLEQELSIKLFEKIGRNMVLTPL 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 GK LL ++ + + D ++KIA A SL L ++++ P Sbjct: 61 GKELIPYADELLNTVKK-IESIGKYGDNITGELKIAVAESLMSYKLQNVLAMFKEKAPNV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ A++ + + L G+ D ++ + ++L + + VC+ E L Sbjct: 120 RLSMVALNCYDIKNMLASGEIDLGLMYNVGS-KNESLNAVKLSDFDVALVCSPQFEQEKL 178 Query: 188 ---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + L+ S +++ + +T E +K+ GI Sbjct: 179 DFSTPNQKINTSLIINEVESIYRKILESYFFDKNIFLDNTI-ELGSIEAIKKCVASNLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRELRE 297 ++LP + I++E+ +GKL L +L I YA+ N ++P F +R+ Sbjct: 238 SFLPRFTIEEELENGKLKELKAGDLNAKITAIYAHHKNKWISPAMSLFIELVRK 291 >UniRef50_D2TPN0 LysR-family transcriptional regulator n=3 Tax=Citrobacter RepID=D2TPN0_CITRO Length = 298 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 140/297 (47%), Gaps = 15/297 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL DFL L + N+S AA +R+++QPA SRRI+ALE+ +GV LF+R TP+ L+ Sbjct: 1 MDCKWLEDFLALSQHGNYSLAATARHITQPALSRRIKALEEMLGVPLFDRTTTPVTLTRY 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP----- 125 G+ F R +L L EL + + + H+LS+ +LP +I+ + Sbjct: 61 GERFEPYARQVLSSLTEARQELAAMCPATDDTLVMVSLHTLSVNILPDMINYLRQSEPQL 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSF----HDEDLLEAPFDHIRLFE-SQLFPVCAS 180 +T +D + L + Q D + ++ L A L+ + PV ++ Sbjct: 121 NYTVNASIQGIDNHFNALIDRQIDILVTYDIPSSQPGLDIAGKLKRSLWRYERFIPVISA 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 D + + P L YS +++ R+I+ + F S +SE +K++ + Sbjct: 181 D--IAEVLDDPHAQIPWLCYSDYTFVRRIIDPA-EQRVRPRLKKVFESGLSETIKEMVMR 237 Query: 241 GCGIAWLPEYAIQQEIRSGKLV-VLNRDELVI-PIQAYAYRMNTRMNPVAERFWREL 295 G+AWLPE + + + + +++ +D +I I + V +R W +L Sbjct: 238 HMGMAWLPESMVAEALVNREVIHCWPQDAAMICEIPVVIWANIDDQRQVLQRCWEKL 294 >UniRef50_C9L6F7 Transcriptional regulatory protein n=2 Tax=Firmicutes RepID=C9L6F7_RUMHA Length = 299 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 8/290 (2%) Query: 17 YDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHS 76 F T+ N S+AA +SQPA S+ IR LE+ + V LF+R +QL+E+G++ + Sbjct: 9 RVFYTVANTGNISKAAARLYISQPAISKSIRKLEENLEVSLFSRNSRGVQLTEEGELLYH 68 Query: 77 QIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFTWAIEA 133 +++ LE +++ + I I + +L +L + + P +IE Sbjct: 69 YVQNAFYSLEKGETQIKKIHELGIGHIHIGVSTTLCKYVLLPYLKEFIETHPHIRISIEC 128 Query: 134 IDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQP 193 + + L+E + D E L FD + E + EH + ++ Sbjct: 129 QSTNHTLQLLKENKVDLGLIGKPERLYHTHFDSLGEIEDIFVCTKSYMEHLSKRSDYSEN 188 Query: 194 HF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEY 250 F L+ ++ + + I+ L + + VS+M +LL + A G GIA + Sbjct: 189 PFQSATLMLLNKGNMTRQYIDDYLASCRMEADNLLEVSTM-DLLIEFAKIGMGIACVIRQ 247 Query: 251 AIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELE 299 +++E+ G L+ + + + +A N N + F R+ Sbjct: 248 FVEKELAEGSLIEVPLPISINKREIGFALPENISQNKAVKEFIHFYRKST 297 >UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RPQ8_9CLOT Length = 296 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 118/294 (40%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+T+ + + + AA ++QP+ S I +E GV+LF+R L L+E Sbjct: 1 MTFRHLKIFVTVCETGSMTAAASQLFIAQPSISLAISEMEDYYGVKLFDRISRKLYLTEN 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ RH++ L+ +R ++K+ + ++ LLP I ++ P Sbjct: 61 GRRALQYARHIIDLLDEMEQGVRDVDAM--GRLKVGTSITIGTYLLPGYIKKLKQQYPAL 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFD-HIRLFESQLFPVCASDEH--G 184 + ++ + D E + +PF +L +C + G Sbjct: 119 KVEASIANSGTIEQQILDNDIDVGII---EGVAHSPFILSESFAGDRLVFICPAGHEFAG 175 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L L++ GR I + EL+ + S+ ++++ Q G GI Sbjct: 176 KTLEELSEVRNQDFILREKGSAGREIFDGILAAQELNVRPIWQSASNQVILQGVKAGLGI 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 + LP + ++Q+IR G+L +L + + Y N + A +E Sbjct: 236 SILPYFLVRQDIREGELAEFRIKDLALNRKYSVIYHKNKFLPRSARTLMELCKE 289 >UniRef50_D0SM30 LysR family transcriptional regulator n=2 Tax=Acinetobacter RepID=D0SM30_ACIJU Length = 296 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 146/298 (48%), Gaps = 11/298 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 +E +W+ D L LE+ ++ SQAA R+V+Q AFSRR++ +E A+G + +R+ + + Sbjct: 1 MTLEIRWIEDLLALEQEKSISQAAEIRHVTQSAFSRRLQNIENALGFPILDRKSKNIDFT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP--- 125 E G+I + +++ QL S + L + K A +HSL P I ++ Sbjct: 61 EAGQILLATAKNIHNQLSSTITYLEKNIKNNELNTKFAVSHSLITQFFPRFIHELSEDLS 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLFPVCASD 181 I A ++ + + L +G D + + D+ + + F ++ + ++ PV A Sbjct: 121 DLKLEIIAANLKQGMRLLTDGSCDFLICYCDQKTLAQMDFSLFLFHKIVKMEILPVTAL- 179 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 + + ++ + FPLL+YS+ +Y+ + ++ + ++L++ + + + LK++ L G Sbjct: 180 YNNQPKYSFNEL-FPLLSYSKQAYLRKCVDDII--ENQLNYRILYETDNASDLKELVLQG 236 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 GIAWLP+ +++EI KL V+ I Y R ++ W L E Sbjct: 237 LGIAWLPKLLVEKEIAENKLKVVEPINFHIYQDVYIIRRKIVLSKRINYIWDFLTSQE 294 >UniRef50_B1ZVT1 Transcriptional regulator, LysR family n=3 Tax=Verrucomicrobia RepID=B1ZVT1_OPITP Length = 321 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 126/296 (42%), Gaps = 10/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++++ L F L +C++F+ AA ++Q A S I+ALE +G L +R + L++ Sbjct: 12 LDSRQLLAFAALARCQSFTLAAKELFLTQSAVSHAIKALEAEVGSRLVDRANRRVLLTQA 71 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 G+ F + +L+++E+ A L S + ++++ A+ + LLP+++ + F Sbjct: 72 GEQFLRHVEKILREMEAARAGLDALSRWGHGRLRVGASTTACQYLLPTVLREFKQSFPKS 131 Query: 129 -WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 IE D V+ L+ + D E FD + LF+ +L + + Sbjct: 132 VITIEPGDHATQVELLQSNRIDLAIMLQPE--TRGEFDFVPLFQDELRLLTSPVHAWVQQ 189 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 E + ++ Y++ SY RL+ R ++ F + +K++ G G+ Sbjct: 190 ERTTPGSLAAETIVLYNKASYTFRLVTDYF-RQERMTIGHFIELGSMDAIKELVKIGVGV 248 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRELRELE 299 L + + E+ +G LV + AY R+ E F R + Sbjct: 249 GVLAPWVARAELENGALVSFPLGRKRLRRTWGIAYLRGRRLPLGEETFIGLCRSVT 304 >UniRef50_A9KDX5 Transcriptional regulator, LysR family n=3 Tax=Coxiella burnetii RepID=A9KDX5_COXBN Length = 294 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 125/295 (42%), Gaps = 22/295 (7%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 FL + + F+ AA +S+ A S IR LE+++ LF R ++L+E+G Sbjct: 5 SLHHFEAFLCVAESGGFTPAAKQLGISKAAVSHTIRLLEESLRTPLFVRDTRNIRLTEEG 64 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAI 131 ++ SQ + L ++L++ + G + ++++ + L ++ F Sbjct: 65 ELLFSQCKRLKEELDAARNLVAGFNSSPSGTLRMSCNPYFAETHLFDLLQTYTQRFPKVK 124 Query: 132 EAIDVDEAVDKLREGQSDCIFSFH---DEDLLEAPFDHIRLFESQLFPVCASDEH----- 183 + V+E + + + D +F + ++ D R + +CAS ++ Sbjct: 125 VELLVEERMPNMEREKIDIVFGINWPAPSGVVAKTIDKTR------YVLCASPKYLNKFG 178 Query: 184 -GEALFNLAQPHF-PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 + + L Q + P L S + + L L+ + + + L+K+ AL+G Sbjct: 179 IPKTVKALEQHRYIPHLGRSPENVI-----MNLKNKVTLNLTPQLKLNNAHLIKKCALNG 233 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWREL 295 GI L +Y +++E+ +G LV + +D I Y Y R + P +F + Sbjct: 234 LGIIQLHDYMVKEELANGSLVEVLKDHFQAEIPIYIYYQKHRFVQPKVRQFINLV 288 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 122/297 (41%), Gaps = 12/297 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F + + F++A +SQPA +R++ ALE +G L +R + L+ Sbjct: 1 MLLQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + + R ++ + + E+ + + +I I A ++ L LLP I++ P Sbjct: 61 GRLVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTVGLRLLPPILAAFKREHPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++A E + +L EG+ + + + L E + VCA E Sbjct: 121 RVHVKADRTQETIQRLLEGEIELAI--LPTPVTHPRLRSVPLVEDPVVLVCAPGRRSELP 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L L+++ S ++ L + + + E + + G G Sbjct: 179 DPLPLAKLGEIDLISFQAPSRFRTFVDAML-EQAGVYPNVTMEFDSHEAVTLMVEAGFGC 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELV--IPIQAYAYRMNTRM-NPVAERFWRELREL 298 A +P A+++E+ G +V + + + + A+R +P ER ++ + + Sbjct: 238 ALVPASAVERELALGTVVRVEVEGMPRMARTTSLAFRHPNPGWSPATERLFQMIVDF 294 >UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5MZU7_CLOK5 Length = 289 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 117/296 (39%), Gaps = 16/296 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + F+ + N ++AA +SQ A S+ I LE GV LF R L +++ Sbjct: 1 MTLRHFNIFVVVCDKMNMTKAAEQLFISQSAVSQVISELEGHYGVRLFERLSRKLYITQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP---LF 127 G+ S R++++ +++ + I+I A+ ++ +LP +ISQ Sbjct: 61 GEKLLSYARYIIKLNMELENDMKTLGEN--GSIRIGASVTIGAYVLPKLISQFQKVNSET 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + ++ L + + D + + ++ E +L +C S L Sbjct: 119 DIKVYEENTEKVEKMLLQDEIDIAL--VEGETTHTDIINVPFMEDELVLICGSGHRFAKL 176 Query: 188 -----FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + L + F + R S R + + + L + + + ++ +K +G Sbjct: 177 TCIEPYELEKEKF--IIRERGSGTRRTFEDKM-KENHLKWQISWTCNNTDTIKIAVSEGL 233 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 GI+ + ++ E+ G L + E+ Q Y N + + + F +R+ Sbjct: 234 GISVISRCSVINELVLGTLCEIPVKEIKFKRQFKIIYHKNKYLTEIMKHFIDFIRQ 289 >UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QKA9_CATAD Length = 299 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 9/290 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + +F++AA N +Q + + +IR LE ++ ELF+R + +QL++ Sbjct: 1 MEFQQLVTFQRVATVLSFTRAAADLNYAQSSVTNQIRNLEASLQTELFDRLGSKIQLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ LL + A++ G ++ + I S++ LP ++ P Sbjct: 61 GQRLLLHAERLLALADEARADVAGPAE-PSGTLTIGTMESITSYRLPPLLELFHYRYPAV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 A+ + LR+G D F + D A D + L + +L V A Sbjct: 120 HLALRPSLCADTCRALRQGTFDVGFLM-EPDTGHAGLDSVVLSKERLVLVAAPSFPLASA 178 Query: 186 -ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + A P+L L LT +L+ ++F E +K+ + G G+ Sbjct: 179 PTVTIEALRKVPVLATESGCSYRDLFEIELTAE-QLTPASFLEFGTIEAIKRGVIAGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRE 294 + LPE + EI SG L VL + A+R R++ + F + Sbjct: 238 SLLPEITVADEIASGSLTVLPWTPPFEVVIQLAWRRGKRLSRELQLFIDQ 287 >UniRef50_C0Z9T7 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9T7_BREBN Length = 290 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 124/292 (42%), Gaps = 8/292 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + F + +F++AA + SQ + I+ LE+ +GV LF+R +QL+ Sbjct: 1 MEIRQFQTFKAVVDFNSFTKAAQALQYSQATITSHIQQLEEEMGVPLFDRLGKKIQLTAY 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ ++ + LL + ++ Q +++I A+ ++++ L I+S+ P Sbjct: 61 GRELYTYVEELLVSYAK-IKDISANEQSLQGELRIGASETITIYRLGDILSKYRASYPGV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D +KL +G D + + + L+ P + LF ++ +H Sbjct: 120 NISFVMDDCSRLREKLHDGLLDIVITLEPK--LDDPNLVVELFSTERLVFIGGRDHSFEK 177 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 A ++ + + R R L + E+ S E +KQ +G G++ + Sbjct: 178 IEDAGEEC-MIFSGEHCALRRFFLRFLEK-REIKPKHHLEFSSMEAIKQSVANGLGVSLM 235 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 P +++ + K+ ++ +E ++ AY N ++ ++F + E Sbjct: 236 PYISVEALLNEQKVKMIACEEELLFYAQIAYHKNKWLSRAHKKFIDLMLESR 287 >UniRef50_B3DV00 RuBisCO operon transcriptional regulator CbbR n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV00_METI4 Length = 303 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 136/293 (46%), Gaps = 9/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++++ LY F+T + +FS+AA S ++SQPA SR I++LE+ +G LF+R+ L+ Sbjct: 5 LDSRALYIFVTAAQSESFSKAAKSLHMSQPAISRTIQSLEEELGCRLFDREGKNPLLTPI 64 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 G+ F + + +L +E ++ +KI A + +P + + F Sbjct: 65 GREFLADAKEILAGMEKARIDIENLKREGPKKIVFATSSLSCQYFIPQLYREFQESFPDC 124 Query: 129 -WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +AIE D A++ + E + D + + + LF+ L + +S Sbjct: 125 LFAIEPADSPLALELVEEKKVDFAITLKPLS-YKEGLVMVELFQDDLLFLVSSLHPWTRK 183 Query: 188 FNLAQPHFPLLNY---SRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + +Y S+N+ ++ ++L + S L +F + + +K+++ G GI Sbjct: 184 KEIPKKEIEQAHYFIKSKNNTTFHILQKSLAQAS-LYPKSFIELAETAAIKEMSKMGLGI 242 Query: 245 AWLPEYAIQQEIRSGKLVVLN-RDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 L + ++ E++ GKLV L E + +AY+M +++ + F + Sbjct: 243 GVLASWVVKDELKKGKLVSLPLVPERITRKWVFAYKMGRKLSLLESTFLELCK 295 >UniRef50_C6B5Y5 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B5Y5_RHILS Length = 305 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 13/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T WL D L NFS+AA RN++QPAF RRI+A E G L +R ++++ Sbjct: 1 MDTAWLLDLRALADTLNFSRAAELRNITQPAFGRRIKAFEDWSGSVLVDRSTHRIRITPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+I +LQ++E +L AA H+LS P + + Sbjct: 61 GEIMLDAANDILQRIERATHDLNQERSATATL-TFAATHALSFTFFPGWVQSLGSSVATV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCASDEH 183 + + +++E + EG++ + D L EA F ++ L L PV + Sbjct: 120 PIRLLSDNMNECEKMMAEGRAQFLLCHFHPDSEIRLHEADFKYMELASDVLVPVARRGKE 179 Query: 184 GEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTR-HSELSFSTFFVSSMSELLKQVAL 239 G + L + P +++ S MGR++ L+ SEL F S ++ +LK +AL Sbjct: 180 GAPIHKLPGTPEIPVPHISFDEKSGMGRILAANLSPVESELHLVRVFTSHLAMVLKALAL 239 Query: 240 DGCGIAWLPEYAIQQEIR-SGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 +G G+AW+P E+ G L V + ++P++ R TRM +AE+FW Sbjct: 240 EGKGVAWIPRSLASSELEPEGNLAVAGDERWMVPVKIVLIRSRTRMTELAEKFW 293 >UniRef50_A9BU84 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BU84_DELAS Length = 311 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 13/304 (4%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 +H + K L D L + +AA R+++ PAF RRIRALE+ G L R L Sbjct: 1 MHELNLKLLQDLQALADTGSLYKAAERRHITHPAFGRRIRALEEWAGTPLVERGHQSTTL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMP 124 + GK + +L LE L+ I IAA +LS +LP II +Q Sbjct: 61 TAAGKTLLASAHEVLGILEQTHGLLQRPHRTRDETITIAAGRTLSHTVLPGIITALNQAM 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLFPVCAS 180 P W + +D V+ L +G+ D + L + + + L PV Sbjct: 121 PQLCWKVVTTSLDYGVEMLLQGKVDLLMCHAQPAIEGSLQGHHLAWLPVGQDTLIPVSIP 180 Query: 181 DEHGEALFNL----AQPHFPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSELLK 235 + L P P L+Y+++ +G+++ L + T + + +++ L Sbjct: 181 LVPQLPKYALPAHGGGPLVPYLDYAQSMSLGKILRSHLHELCDTTRLRTVYEADLADSLH 240 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMN-PVAERFWRE 294 + G G+AWLP ++ ++ G+L + +PI YR + P+ R W Sbjct: 241 AMVHQGLGLAWLPLTLVKADLTEGRLARAAGPDKDVPINVRLYRRPAAQSKPLTRRVWAG 300 Query: 295 LREL 298 L L Sbjct: 301 LENL 304 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 126/297 (42%), Gaps = 11/297 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 L N+ + L F+TL + ++F++A+ ++SQPA S I+ +EQ G LF+R LQL Sbjct: 20 LMNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQL 79 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 S +G+ F R LL + +L + Q KI++A S ++ P ++ Sbjct: 80 SPEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREY 139 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P ++E + ++ +D +REGQ + +F + + LF + + Sbjct: 140 PDINISVEDVVMESVIDAVREGQVELGITFEPDQ--MDGLEFTPLFTDRWIALVHPKSPL 197 Query: 185 EALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 A L A P + +R S+ + L+ ++ + ++ + ++ G Sbjct: 198 AARKKLSWTALMEEPFIAMNRGSWSRNTTEKALSEAG-VTPTRLLEANQLATIGRMVSVG 256 Query: 242 CGIAWLPEYAIQQEIRSGKL-VVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 G A +P+ QQ G L + R + + + R ++ A+ L E Sbjct: 257 LGTAVVPQLCRQQMESLGILCKTIGRPSIERQVGIFT-RKRRSLSGAAQALIAHLLE 312 >UniRef50_A9BZS3 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A9BZS3_DELAS Length = 331 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 95/314 (30%), Positives = 139/314 (44%), Gaps = 35/314 (11%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 +WL DFL L + NFS+AA +R+++QPAFSR IRALE+ +G ELF+R P L+ G+ Sbjct: 2 EWLEDFLALAESGNFSRAAEARSIAQPAFSRHIRALEEWVGAELFDRSAHPAALTAAGQR 61 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF---TWA 130 F + +L +LE+ + R D A ++ AA H LSL P + + Sbjct: 62 FQPLLEDVLAKLEAARIKARAAHDQAAASLRFAATHVLSLTFFPRWLGTLESQLRLGPIQ 121 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCA--SDEHG 184 + D+ + + + + L EA + ++L E L PV A D G Sbjct: 122 TISDSFHACEDQALQRRVQFVLCHGHAEVPGRLDEAGYPMLQLSEDMLLPVSAPWPDAPG 181 Query: 185 EALFNLAQ-------PHFPL--LNYSRNSYMGRLINRTLTRHSELSF------------- 222 AL + PL L YS S +GR++ L Sbjct: 182 RALHAIDAGSATGGGQPLPLAVLAYSEASGLGRIMRSRLRGLFGAGGAGTAGEGDGRPEL 241 Query: 223 ----STFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY 278 T F + + LLK +AL+G G+AWLP I E+RSG LV+ +P++ Y Sbjct: 242 PQGAQTVFTAHHAALLKAMALEGRGVAWLPRSLIVDELRSGALVLAGGHAWSVPVEIRLY 301 Query: 279 RMNTRMNPVAERFW 292 R M AE W Sbjct: 302 RQRADMADAAEALW 315 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 14/295 (4%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N + + L F+ + + +F AA N+S PA SRRI LE +G LFNR ++L+ Sbjct: 5 NFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVELTP 64 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI---ISQMPPL 126 G++F + R L LES + + + + ++ +A S +L LP++ SQ P Sbjct: 65 LGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQHYPG 124 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 + +++ + + G+SD F + + E F+ I + F + EH A Sbjct: 125 IRVRVVDETMNQVLQSVLSGESDFGIGFMNTLVPEIAFESIH---NDPFVLAMRREHPLA 181 Query: 187 LF----NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 L+ +R+S +L++ +LT+ L+ S F S L + G Sbjct: 182 RHKSVNWADVEKESLIAVARSSGNRQLLDDSLTKAG-LNPSFAFEVSHVATLLGMVEAGL 240 Query: 243 GIAWLPEYAIQQEIRSGKLVVLN-RDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 G+A +P A+ LV L R + R ++ P AE F + LR Sbjct: 241 GLAAVPRMALAS--THATLVGLPLRQPQTVRRVGLLTRHGVKLRPAAEMFHQHLR 293 >UniRef50_B2A0Q8 Transcriptional regulator, LysR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0Q8_NATTJ Length = 300 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 121/305 (39%), Gaps = 20/305 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F+T+ + NFS+AA ++QP S + +LE+ G++LF R+ L+E Sbjct: 1 MDFRQLEVFVTIVEEGNFSKAAKRLYLTQPTVSAHVDSLERECGMKLFERRNRQAVLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 G+ F+ LL E + KI I A+ + + LLP++++ + Sbjct: 61 GQNFYPYAVDLLDMKERAHESFARFNQEIDGKITINASQTPGIYLLPNLLAPYQKKYPRS 120 Query: 129 -WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD------ 181 + I D D + + ++D F + L QL + S Sbjct: 121 SFRITISDTDGVFENILNYEADLGFVGSPK--TSDKLVAKPLINDQLVLIADSPFKEKLD 178 Query: 182 ---EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQ 236 + L+ P + + S ++ +TL + + E +K Sbjct: 179 EQQKKQGVLYMKDLLDLPFIIRTEGSATRKVFEKTLAEQEKSIKNLQIAGQVDNLEGVKS 238 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWREL 295 G G++++ ++++ ++ L +L+ + Y R+ +P ERF + Sbjct: 239 FVHQGVGVSFVSKFSLNRDT---SLKSFYIQDLMPERKFYLIYHKDRVFSPTCERFIAHV 295 Query: 296 RELEI 300 ++ +I Sbjct: 296 QDQKI 300 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 122/297 (41%), Gaps = 11/297 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 NI + L F ++ + +F++AA ++QPA S +I+ LEQ +G+ LF + + L+ Sbjct: 1 MNITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 E G+ + + +L L ++++ A + + +++ P Sbjct: 61 EAGEEVRRYAQRISAELRELADGLEALRGLNSGRLRLTVAST-ANYFATDLLAAFTRRQP 119 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH-- 183 T+ +E + + + ++++ + D + L+ + + L + A D Sbjct: 120 GVTFQLEVTNREGVIRRIQDNEMDLAVMGRPPEGLDVAAEA--FMPNPLVIIAAPDHPLA 177 Query: 184 -GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 G + + + S + R L ++ S +E +KQ G Sbjct: 178 DGSPIPLERLQDELFVLREQGSGTRNAVQRVL-EERGMNLRGGLEMSSNEAIKQSVQAGL 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELREL 298 G+ + + + E+ G+L VLN + + Q Y +R R++P AE F + + + Sbjct: 237 GLGVVSIHTVALELELGRLRVLNVEGFPLERQWYLVHRSGKRLSPAAEAFRQFILDE 293 >UniRef50_Q3AEF0 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEF0_CARHZ Length = 301 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 124/294 (42%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F + + + S+AA ++SQPA S +I ALE + V+L R ++L+E Sbjct: 1 MNLNQLEAFCNIVEQGSISKAAKLMHLSQPALSTQIAALENQLQVKLMERTNRGIELTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 G+ + + +++ E+ + + ++ I AA ++ LP I + Sbjct: 61 GETLLYYAKRICNLVKNLNEEIERLKNLEEEELSIGAASTIGGYALPCSIYIFQEKYESA 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHG 184 + ++ ++ ++ L + Q D + ++ F L +L V ++ ++ Sbjct: 121 RIKLTIMNTEKVIEALLDRQIDIGL--VESNIESNEFISSHLTYDELVLVVPNNNSYKNK 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRH--SELSFSTFFVSSMSELLKQVALDGC 242 E L P + + S + + I + L + + + + +K G Sbjct: 179 EILTLDELRTLPFIIREKGSGIRQTIEKALAEKGLNISDLNIVMEVNSIDAIKVAVESGK 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWREL 295 G++ LP +A+++E+R+G L + ++ + A N + + + ++F + Sbjct: 239 GVSLLPRFAVKKELRTGSLKSIKVKDISLLHPFVAITLKNKKRSLLEKKFLAFI 292 >UniRef50_A9KNS0 Transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=A9KNS0_CLOPH Length = 294 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 12/298 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + + F+T+ NF++AA +Q + + +I+ LE+ +GV+LF+R + L+ + Sbjct: 1 MDIRLIIAFVTVATLHNFTKAADQLGYAQSSITSQIQLLEKELGVKLFDRLGKKVCLTPE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F R LL E L + I S+ LP ++ + P Sbjct: 61 GEQFLVDARQLLFSWEKAKGSL-SLLKSPHGILTIGVNESVCSVKLPKLLDEYRKRYPEV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + I+ DE L+E D P +++++ + + S H Sbjct: 120 EFHIKIGSSDELELWLKENLIDVAVLLDKP--WHVPELTVKIYQEESLGLFVSPNHPLDG 177 Query: 188 FNLAQPH----FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 PH P+L S +S + I + + + SF ++ LKQ A+ G G Sbjct: 178 VGNILPHDVSSHPMLLIS-HSSCWKNIFQAVMEEANESFRIMLETASISDLKQFAVLGFG 236 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELEI 300 IA LP YA+ +EI S +L +++ + + + + ++P E F +++ Sbjct: 237 IAVLPLYAVDEEIASNQLSMIDWKGKNLELFIQVVHHSDKWLSPSLEAFLVVCTDVKW 294 >UniRef50_B6ITN2 Transcriptional regulator, LysR family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6ITN2_RHOCS Length = 311 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 116/292 (39%), Gaps = 11/292 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 L F + + R+F++AA +S+ A SRRI LE +G LF+R + L++ G Sbjct: 3 RLDDLRLFTCVAETRSFTRAAERMGLSKSAASRRIAELEARLGARLFHRTTRSISLTQVG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAI 131 + FH ++ +L LE + + +K+AA S L L I F Sbjct: 63 QGFHERVSQILADLEEAEGLVASQHAAPRGVLKLAAPMSFGLLHLGPAICAFQERFPEVQ 122 Query: 132 EAID-VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGEAL 187 +D D VD + EG + L ++ R+ ++ V + GE Sbjct: 123 VDVDLSDRFVDLVDEGYD---LAVRIGRLKDSSLIARRICPARRVAVASPAYLQRRGEPA 179 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSEL---SFSTFFVSSMSELLKQVALDGCGI 244 A L+YS S R L + ++ ++L+ A+ G GI Sbjct: 180 TPDALAEHDCLHYSNASVADHWSFRAAPGSEMLRPARPAVTMRANNGDILRTAAVAGRGI 239 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 A LP + + ++ +G+L + D V P +A N ++P F + Sbjct: 240 AVLPTFIVGDDLAAGRLRAVLLDWTVSPSALHAVYPANRHLSPKVRAFVDFI 291 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 13/294 (4%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 N E L F + + +F +AA + ++SQPA +RRI+ LEQ+IG L +R + + Sbjct: 4 NCEILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVAPTA 63 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPL 126 G+ +R +L++ + +L ++ + I +A + + LP++I P Sbjct: 64 TGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTFGRDYPH 123 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSF---HDEDLLEAPF--DHIRLFESQLFPVCASD 181 I + +E + + G+ + + D DL P D L + P+ A D Sbjct: 124 IRLRIRDLTANEGLQAVARGEVEFGINLMGNSDPDLSFEPLIDDPFVLAMRKDHPLAAFD 183 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 E + PL+ R+S L++ L R + L + F+ + + G Sbjct: 184 E----IHWNQLEGHPLVVVDRSSGNRTLLDAALARAN-LRLNWFYEVTHLNTSLGLVEAG 238 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 GI+ LP A QE + + +V R + ++P A+RF L Sbjct: 239 LGISVLPRLATPQEEHPFLVTRPIVNPVVTRTIGIVRRRSATLSPAADRFIDML 292 >UniRef50_Q2SMQ7 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMQ7_HAHCH Length = 330 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 119/289 (41%), Gaps = 12/289 (4%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F+ + + +F++AA +S+ +RR+ ALE +GV L R + L+ G+ F+ Sbjct: 33 LTAFVNVAEAESFAKAAREMGLSRSQVNRRVIALEDELGVTLLARTTRHVSLTPTGQAFY 92 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WAIEAI 134 + + +L L ++ Q +KI A S L S ++ + + + Sbjct: 93 LRAKSILNDLREAETAIQSDHAEPQGDLKINAPMSFGTMHLSSALADFMTRYPNIRVHLV 152 Query: 135 DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD----EHGEALFNL 190 D VD + EG D + + +H + +L +CAS +HG Sbjct: 153 LDDRFVDPVSEG-FDITVRVAETREAPSLIEHTIVEAKRL--LCASPGYLQQHGRPRTIK 209 Query: 191 AQPHFPLLNYSR--NSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLP 248 P L+Y + Y RL R + + + + +E L+ A+ G G+A LP Sbjct: 210 ELASRPCLHYGNLASGYTWRL-RRGDAPETSVRVNGVLCCNNAEALRDAAVAGLGVALLP 268 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 + E+++G+LV + + P+ Y N + F + ++ Sbjct: 269 TFIAGPELQTGRLVSVLPEYQAPPVYLSLLYPPNRHLAARVRVFVKFMQ 317 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 121/298 (40%), Gaps = 20/298 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+ + + + ++AA S ++SQPA S IR LE G+ LF+R L L+E Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G S H+++ + +L+ ++I ++ S +LP ++ + P Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDS--AGTLRIGSSISTGTQMLPQLVRRFNLRFPQI 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFS---FHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + + DK+ Q D + D++ PF RL V + +H Sbjct: 119 RTQVLIDNSRIIEDKVLTNQLDLALVESLSYSPDIVCVPFYTDRLI------VITAPKHP 172 Query: 185 EALFNL----AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 A +P+L S +++ L +E+ + + S+ + + + Sbjct: 173 LTQNPECTVKALADYPVLLREPGSGTREVVDALLV-TAEVQITPLWESTSTRSIINAVKE 231 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLN-RDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 GI+ LP ++ EI+SG + L L + + N + P A+ F +E Sbjct: 232 NIGISILPYELVKNEIQSGAVAGLPLASPLPNRTCSIIHHRNKYLTPSAQAFIEVCQE 289 >UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F0J2_9FIRM Length = 297 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 123/296 (41%), Gaps = 13/296 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + F+ + + N ++AA ++QP S I+ +E+ G F R L ++E+ Sbjct: 1 MSIRHFRIFIAVAEEENITKAAKKLYLTQPTVSVAIKEIEEHYGARFFERINQRLHITEE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F +H + + E+ + ++++ A+ ++ +P +I + P Sbjct: 61 GKRFLDYAKHFIAMYDEM--EIAFKNTDFTGRLRVGASVNIGTYYIPRLIREFRDRYPGI 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ +L +G+ D + LF + +CA EH A Sbjct: 119 NVQVKINTTAVVEKELLDGKLDLAL--VGGTIQSEHIVAEPLFYEKYTAICAP-EHPMAG 175 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + F PLL+ ++S + ++ + L+ + + S+ L + G G+ Sbjct: 176 KTVPLEEFMKEPLLSREKSSGAYE-VFQSAVNQTGLTVTPVWESTSQTTLMEAVHYGLGV 234 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELRELE 299 +PE I++E+R G+L + + + AY + ++P ++F ++ L+ Sbjct: 235 TIVPEQMIKREVREGRLSQITFSDFSFQNTIHIAYHHSKYLSPSIKKFILLVKTLD 290 >UniRef50_UPI0001C36638 LysR family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36638 Length = 301 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 25/305 (8%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L F+ + + ++FSQAA ++QP S I +LE+ +G LF R ++LS Sbjct: 1 MNLKQLEAFVCVAEVKSFSQAAKKLYLTQPTVSAHIHSLEKELGARLFIRTTKDVELSPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 G++ + R +LQ ++ L + +KI + A+ +LP I+ S+ P Sbjct: 61 GELLYGNARKMLQLEKNILRDFTRADTPGIQKITVGASTVPGQYILPQILSLFSRTYPGN 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFS---FHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + D E V + +G+ + F+ D + PF + RL V + Sbjct: 121 QLELMEADSLEVVRMVLDGKVEIGFTGTRLEDPTCVFEPFYYDRLV------VITPN--A 172 Query: 185 EALFNLAQPHFPL--------LNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELL 234 EA + FP+ + S + R L H + S E + Sbjct: 173 EAYREYEKTGFPIERFYEEKWIIREEGSGTRKETERYLKEHGVDLRRMNVVATISNQETI 232 Query: 235 KQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWR 293 K+ GIA + A++ + SG+L+ E I + Y + + + A F + Sbjct: 233 KKSVSTAMGIAMISSAAVEDYVASGQLLRFPLAEGDIYRKLYMVWSKSNKPGKAARLFIQ 292 Query: 294 ELREL 298 +REL Sbjct: 293 FVREL 297 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 113/294 (38%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F+ + +C++F++AA +++QP S+ I+ +E +GV L +R + L++ Sbjct: 7 LDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLTDA 66 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ Q + +++ E+ EL + KI++ + P II + P Sbjct: 67 GQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYPNI 126 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + +++ EG D + FD +L V Sbjct: 127 EIQLIEEGAKKVEEQVEEGHLDIGVVLLP--IPSGTFDSFPFVHEKLMVVVYPKHRLAGQ 184 Query: 188 FNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +A H P + + + I R + SS + + ++ G GI Sbjct: 185 TVIALKKLEHEPFILFREGFVLHDRIPEECIRAG-FQPKVVYESSQWDFISEMVAAGLGI 243 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRELRE 297 + LPE + E+ +++ + E I A + ++ + +++ Sbjct: 244 SMLPESICR-ELNPNRVITIPLVEPSIDWSLAMIWPKEQYISYAVREWINFVKQ 296 >UniRef50_A9KDY0 Transcriptional regulator, LysR family n=3 Tax=Coxiella burnetii RepID=A9KDY0_COXBN Length = 292 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 118/290 (40%), Gaps = 8/290 (2%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 + F + ++FS+AA+ VS+ S +I ALE+ + V+L +R L L+E+G Sbjct: 4 LNQMEIFYFVATWKSFSRAALELGVSKGYVSTQITALEKDLMVKLLHRTTRHLTLTEEGN 63 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIE 132 +F ++ + + ++ L+ +K+ A S+ L ++ + + Sbjct: 64 LFLESCAKIVHEKKLAISLLKESQAEPSGHLKVTAPPSMCNTFLTELLPKFQKKYPKISL 123 Query: 133 AIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE----ALF 188 ID V L + D R+ + F VCA+ + + Sbjct: 124 TIDPSSTVKNLLQHGIDLALRITTTPDENYI---ARMITTFRFVVCATSNYLKQRTIPKT 180 Query: 189 NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLP 248 L YS + R + ++ VSS S ++K+ L GIA LP Sbjct: 181 PDDLSQHNCLIYSADPIQNRWPFQIKNSTKIVTVKGSLVSSNSLIIKKALLANQGIARLP 240 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNT-RMNPVAERFWRELRE 297 +Y + +EI GKL VL + + I + YA + ++ P + F L++ Sbjct: 241 QYILTKEIEEGKLEVLFSENMKIEMPVYAIYASAVKLPPKIKCFIAFLKQ 290 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 122/294 (41%), Gaps = 13/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + +L + + + R+FS+AA +SQPA S++++A+E+ L R + +E Sbjct: 1 MLLSYLRVYCDIIETRSFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+IF+ R ++++ ++ ++ S I++A +++ L LP I + P Sbjct: 61 GRIFYEAAREIVERYQALEQQMANLSQSVSGTIRVATVYTVGLHDLPPYIKKFIQTYPQA 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED-----LLEAPFDHIRLFESQLFPVCASDE 182 +E ++ + +R+ Q D + ++ ++ P D + + S P+ + Sbjct: 121 RIHLEYSRTNKIYEAVRQNQVDIGIVAYPQEGRQLGVIPLPSDELVVIVSPNHPLARA-- 178 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 G+ + P + + + + +R L H + E +K+ Sbjct: 179 -GKPVALQQLHRLPFIAFDPDIPTRKATDRVLNDHG-VDVEIIHEFDNVETIKRSVEAEL 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN-TRMNPVAERFWREL 295 G++ +P Q E+RSG LV L ++ I + ++F L Sbjct: 237 GVSIIPRRCAQWEVRSGSLVALPIADMRIERPVGVIYKRGKNFSNTLQKFIAIL 290 >UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio RepID=Q30Z73_DESDG Length = 319 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 113/296 (38%), Gaps = 10/296 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + I+ + L F + + R+FS+A +SQP S + ALE+ + V L +R + Sbjct: 21 IDMIDFRRLEAFCKVYELRSFSRAGDELFLSQPTISAHVSALEKELDVRLLDRMGRGVLP 80 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP--- 124 + G+I + LE+ E+ D ++ + A+ + LLP +++ Sbjct: 81 TPAGEILYRHAMTAFASLETAHLEISQLQDIITGEVPVGASTIPAQYLLPPVMAAYMRSF 140 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P + D E + K+ G+ + + + + +L + A D Sbjct: 141 PEVQLQLRTGDTGEIIRKVGAGELTLGVVGAHDQ--QPDIVFTPIIDDELIIIGAPDFAP 198 Query: 185 E--ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVALD 240 ++ + P + S ++ + L H SF S+ + Q Sbjct: 199 RSGSVSCESLADMPWVVREAGSGTWKIFSAALGTHGIDCRSFRPVACVDSSQSVIQCVRA 258 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWREL 295 G G++ A+ + + G+LV + D L + + + Y ++ P A F L Sbjct: 259 GLGVSVTSRIAVAEFLSRGELVEITVDGLDVRREFFCIYHSRRQLFPAARHFIEFL 314 >UniRef50_A3Y5Z0 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y5Z0_9GAMM Length = 289 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 121/293 (41%), Gaps = 14/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + T L F T + +FS AA +++QP S+RI +LE +G LF+R +QL+E Sbjct: 1 MNTLALAAFTTASEENSFSLAAEKLHLTQPGISKRIVSLEDQLGCRLFDRIGRRIQLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F +LQ +S L +R S + IA + L L + + Sbjct: 61 GKTFLPHAYKMLQDAQSGLNAVRNLSHTIDGFLSIATTQHIGLHHLAQPVKRYIIEYEEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + ++ + +A + +G+ + + ++ I L+ +L VCA D H +L Sbjct: 121 AFNLDFLTSKQAYADVLQGKLELAV-ITEPTQMDEQLRFIPLWTEKLKFVCAKDHHLASL 179 Query: 188 FNLAQPHFPL---LNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +++ + +S+ R+I+ + LS S+ E +K + G G Sbjct: 180 NSISLKDLSSVQGILPDASSFTRRVIDDIF-EQANLSIIPRAASNYLEAIKMLVTAGLGW 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 + LP+ I L +L+ D + Q + + A F + L+ Sbjct: 239 SVLPDSLIDD-----NLKILDLDNSPLKRQIGCLIHQDRTESNAASAFIKLLQ 286 >UniRef50_A6FPF9 Transcriptional regulator, LysR family protein n=3 Tax=Rhodobacteraceae RepID=A6FPF9_9RHOB Length = 294 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 10/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + WL D L + +F++AA +RN++Q AF+RRIR++E IG LF+R P+QL Sbjct: 1 MRLDWLEDILAVLDTGSFARAAEARNLTQSAFTRRIRSIEDGIGTPLFDRSRKPVQLLAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWA 130 + ++R + L + LR + A R + +A H+++ + P ++ + Sbjct: 61 VRTREDEMRRMAADLRALRDGLRRSAAGAGRTVALACQHAITTTVSPRLVQILARDRAVR 120 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAP----FDHIRLFESQLFPVCASDEHGEA 186 + + + D+ + +L G+ D + P F+ + + L VCA + Sbjct: 121 VRSGNRDDCLGQLITGEVDIAVIYDSTHGPPRPDSRAFEEVSIGTEPLVAVCAPALAPLS 180 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRH--SELSFSTFFVSSMSELLKQVALDGCGI 244 P++ Y + ++GR++ R + ++++ Q ALDG GI Sbjct: 181 ----GTSPLPVITYPGDVFLGRVVERAVFSRLPPGTELDRKAETALTLAACQYALDGIGI 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 AWLP + + G+LV L +D L + R+ + P A W L Sbjct: 237 AWLPLSVVHDPLSQGRLVRLPQDGLDHMLDLRMIRLAEPIRPAALECWEAL 287 >UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGB6_BREBN Length = 298 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 115/287 (40%), Gaps = 10/287 (3%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 + F + KC++F++AA +Q + + +I+ LE GV LF R ++L+ G++ Sbjct: 1 MQTFREVAKCQSFTRAAEVLGYAQSSVTTQIQNLESEFGVSLFERWGKKIRLTHAGEVLL 60 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTWAIE 132 L L+ A L + A ++I SL+ LP + + P + Sbjct: 61 GYSEQLQAVLDEAKANLSEQAQLA-GTLRIGTVESLAAFYLPPYLQKFRLEQPRMRIMLA 119 Query: 133 AIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQ 192 + ++EG+ D F D ++ +++ L E +L V A + Sbjct: 120 PGICQDLRQGVKEGKFDFAFVL-DWLQDQSELENVVLGEEKLVVVAAPTHPLVKKEKVET 178 Query: 193 PHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPE 249 F + + ++ L R + + + F E +KQ GIA LP+ Sbjct: 179 HDFTGETWIFTEKGCSYRGMMESVL-REAGATVESSFEFGSLEAIKQCVAYDLGIALLPK 237 Query: 250 YAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWREL 295 +Q+E+++G LV+L+ I + + Y M RF L Sbjct: 238 IVVQEEVKNGTLVILSFSHPDIRVFRQLVYHKKKWMPQALLRFLELL 284 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 117/294 (39%), Gaps = 16/294 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L+ F L K NF++AA ++Q A S I+ LEQ +G++L NR + L+ + Sbjct: 1 MDLKRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSLTAE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + +L+ +E EL+ IK A L+ LP + Q P Sbjct: 61 GQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAYPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQL---FPVCASDEHG 184 I L G+ D D + L + Q+ P+ Sbjct: 121 QINIHEAGTATLAQMLVNGELDLALIRGDRE--HEQIRQSLLAQDQIAACVPISHPFAKR 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 A+ PL+ + ++ +N + ++L+ F +++ ELLK + GI Sbjct: 179 SAITLDEFCQQPLVLFKNGYFLRETVNSY-CQQNKLTPQVHFETNLPELLKSMVRRQVGI 237 Query: 245 A-WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELR 296 LP + + L + D IP+Q ++ + ++ A+ F L+ Sbjct: 238 GTCLP-ILVADDPE---LKAIPFD-PPIPLQLGIGWKSSHYLSTAAKAFVDFLQ 286 >UniRef50_Q1DCG4 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DCG4_MYXXD Length = 302 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 113/293 (38%), Gaps = 10/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F + + +FS+AA +V+Q A S++IRALE +L +R + + Sbjct: 1 MQLESLKMFCDVVETGSFSRAAQLNHVTQSAVSQQIRALENRYEQKLLSRSARQVTPTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ + +L + E+R + ++ +S+ L L S+ Q+ P Sbjct: 61 GERLFRGCKEILARFAEVEQEIREQATEVAGTTTVSTIYSVGLHELNSVQKQLLKSHPKV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D+ D + G ++ + + A D + + +L VCA D Sbjct: 121 NMRLNYRRNDQVYDDVILGAAEIGIVAYPQP--RAGVDILPFRDDKLSVVCAPDHPFATK 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + A P + + R + + ++R L R + + E +K+ G G+ Sbjct: 179 QKVSLTALSGVPFIAFDREAPTRKALDR-LFREKSIDINPVMEMDNVETIKRAVEMGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 A LP Q E++ G LV E + R ++ + + Sbjct: 238 AILPMSTAQGEVKGGSLVAKPFAEGPVSRPIGLLIRKGKYLDRASAAVLEAFK 290 >UniRef50_B5YKH0 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKH0_THEYD Length = 296 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 122/293 (41%), Gaps = 8/293 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+++ K ++FS+AA ++QP S I+ LE+ + +LF+R + + + Sbjct: 1 MDIHQLKIFISVFKNKSFSKAAKELFLTQPTISEHIKTLEEELDCKLFDRFGKVIIPTTE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 +I + + +++++E+ L+ + IAA+ +LP ++S P Sbjct: 61 AEILYENAQGVVEKVENLKEVLQKIKSTPSGNLYIAASSIPGTYILPKLMSSFKNIYPQI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + I+ D ++ L GQ + L ++ D+ + +L V + + Sbjct: 121 SIQIDISDSKSVIESLLSGQ--ILLGIVGTKLRKSKIDYFPFMDDELVIVSPNLIKESFI 178 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGCGIA 245 +P + S + + + L + S ++ +K+ +G GI+ Sbjct: 179 EPEEILKYPFITREEGSGTRKEMEKWLGEMGIDIEKLNIVCTLSSTDAVKEAIKNGLGIS 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVA-ERFWRELRE 297 L ++I+ E+ KL ++ + Y TR P + F+ L+E Sbjct: 239 ILSIHSIKDELEYKKLKIVKIKNYKMNRIFYIATHTTRSLPYIYKLFYEFLKE 291 >UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=Bacillales RepID=C9RY94_GEOSY Length = 304 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 123/294 (41%), Gaps = 13/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + LY F+ + + NF++AA +++QPA S+ I+ LE+ +L R ++L++ Sbjct: 1 MD-QLLYVFVKVVEKGNFTKAAEELHMTQPAVSQHIQTLERLFDTKLLYRTNKYVKLNKA 59 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+I + + +L L + A ++ I A+++ +LP +I+++ PL Sbjct: 60 GEIVYHYAKEILGLYTRMNQLLDDLMNRASGELSIGASYTYGEYVLPQMIAKLHQHYPLI 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 I + +E V+ +R Q D D +E +I F V AS H Sbjct: 120 KPTITIGNSNEIVEMVRGHQLDVGIIEMD---IEPKNVYIEPFAQDQMVVVASAHHPYAQ 176 Query: 185 -EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 E + + + S + + +H+ S+ ++L+K+ G G Sbjct: 177 KETVQMEDLRNATWIVRETGSGTRKATDEFFLKHN-FFPSSIMEFGSTQLIKEAVEAGLG 235 Query: 244 IAWLPEYAIQQEIRSGKLVVLNR-DELVIPIQAYAYRMNTRMNPVAERFWRELR 296 + +L + I++E+ G L ++ DE + E F +R Sbjct: 236 LTFLSLWTIKKELSFGTLKIIPINDEPFFRHFSLVTPKTPFYTKAMELFLTIVR 289 >UniRef50_A9KJB0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=A9KJB0_CLOPH Length = 300 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 120/295 (40%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + F+ + +NFS+AA SQ + +I+ LE+ +G +LF R + L+EQ Sbjct: 1 MEIRNIKTFIKVAATQNFSKAAEQLGYSQSTITIQIQQLEKELGTQLFERIGKQVSLTEQ 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G++F + +++ A + + ++I + SL+ +LP ++ + P Sbjct: 61 GEVFLNHANEIMRVTNEA-AVFARETSTPEGTLRIGSVESLATAILPELLLRFHNACPKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---G 184 I+ D ++ +R + D + D+ + + + E + V +S Sbjct: 120 ETIIKTDMSDGLINMVRNNEIDLFLTL-DQKIYGSEWVRAVQQEEDIIFVTSSKHSFSGK 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 E + + P L + + R L+ E+ +E + + G G+ Sbjct: 179 EKINIETLQNEPFLLTEKGVSYRYELERILSE-KEIVIKPVLEIGNTETIIHLLEHGMGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELREL 298 ++LP +++ + I G L + D + + + Y N + F +E Sbjct: 238 SFLPMFSVSKSIERGILTQIQADFPAVHMYSQLLYHKNKWITSQMNTFITIAQEF 292 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 10/300 (3%) Query: 2 DDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQ 61 D+C + NI+ + L F+ + ++F AA S ++SQPA +RRI+ LE +GV L R Sbjct: 8 DNCVGRM-NIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERT 66 Query: 62 VTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS 121 + L+ G+ F + R +L LE++L +R ++ + IA + + LP +IS Sbjct: 67 TRRVSLTAVGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVIS 126 Query: 122 QMP---PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVC 178 P + I +E + + ++D + D + FD L E C Sbjct: 127 AFTEEFPAIRFRIFDAGANEVLQSILNREADFGITLLGADDPDVTFD--PLIEEPFLLAC 184 Query: 179 ASDEHG---EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLK 235 D E++ + R S +++ L R + S F V +S L Sbjct: 185 RRDHPLARQESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLG 244 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 + G G+A LP A+ + + + V R P AE+F++ L Sbjct: 245 -LVEAGLGVAALPRMALPAGPHPSIVTLPLIEPRVTRTVGVVRVPGARRAPAAEQFYQML 303 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 103/277 (37%), Gaps = 10/277 (3%) Query: 15 WLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIF 74 L F + + ++FS+AA +++QPA S I++LE+ G L +R + L+E G++ Sbjct: 5 QLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEAGRVL 64 Query: 75 HSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI---ISQMPPLFTWAI 131 ++ L + + L S + + + A ++ LPSI + P + Sbjct: 65 YNYALELSRLYDEVKKALADISGKVKGNLVVGATLTIGEYFLPSIAGEFKRQYPDVEITL 124 Query: 132 EAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLA 191 + E + + +G+ D + LF+ +L + + + Sbjct: 125 RIANTQEIICRTLDGELDLAL--IEGQAKHPNLIQEDLFQDELVLIIHPEHRWAGRREIT 182 Query: 192 QPHF---PLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVALDGCGIAW 246 PL+ S ++ L + + ++ +K+ G G+A Sbjct: 183 PEELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEAVEAGLGVAI 242 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR 283 + AI++EIR L + + + + Sbjct: 243 ISRLAIKKEIRYNLLREVRLQGIDFRRTFHIAYNRHK 279 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 123/302 (40%), Gaps = 11/302 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 + L+ F T+ + +FS AA S +++QPA + ++++LE G +L R + L+ Sbjct: 1 MALNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 E GK R ++ + + + + ++++ A+ ++ +LP ++ P Sbjct: 61 EAGKALMPYARRSIELIRDTDQAMSAFTKQLKGRLQLGASLTIGEYILPRLLGPFGQTFP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + +++ ++ + ++++ Q F + + + +L + D Sbjct: 121 EISISMKVMNTAQIIEEIINHQ--LTFGLIEAPVNHPDMQMEAVMSDELKLIVPKDHPLS 178 Query: 186 ALFNLAQ---PHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALD 240 + +P + + S ++ L R + +K Sbjct: 179 KRQKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAVKSAVEA 238 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELRELE 299 G G++++ E +++ E+ G L V+ ++ Q Y+ + + + P+ A F LRE + Sbjct: 239 GLGVSFVSESSVKHEVALGLLHVIPIEDTRFKRQFYSIYLKSTLLPISAVTFLTFLREKD 298 Query: 300 IV 301 + Sbjct: 299 LQ 300 >UniRef50_C4LEC5 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=C4LEC5_TOLAT Length = 300 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 113/292 (38%), Gaps = 9/292 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 L FL + K +F++A+ VS A S I+ALE +G LFNR + L+E G Sbjct: 5 NLNDLQLFLVIAKAGSFTKASALLGVSPSALSHSIKALETRMGFRLFNRTTRSIALTETG 64 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAI 131 + I L +LE + L + I+I A+ + +L ++ P + Sbjct: 65 EQLFGIIEPKLNELEREMQGLHESHNRLTGNIRITASEHAASAILSPLLESFIPQYPEIN 124 Query: 132 EAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH------GE 185 + V+ + + D + LE +R+ AS ++ E Sbjct: 125 IEVSVNNGFVDIVNDRFDGGIRLGE--YLEKDMVAVRVGPDVRMLAVASPDYFAKHPKPE 182 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 ++L L S + + +++ S + L+K AL G GIA Sbjct: 183 TPYDLQNHSCINLRLSHQGGIYTWEFEQEGKETKVKVSGQLTFNSVSLIKNAALHGLGIA 242 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMN-PVAERFWRELR 296 +L E + +I++G+LV + + Y + + + P +F +R Sbjct: 243 YLAEDFVADDIQNGRLVSVCETWCPYFSGFHLYYPSAKQHKPAFAKFLEAIR 294 >UniRef50_B5FDE5 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=B5FDE5_VIBFM Length = 300 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 20/297 (6%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + + + F+T+ + + ++AA N+++ A S+R+ LEQ +GV+L NR L+E G Sbjct: 3 QLESMRIFITVVETGSITRAAERLNLAKSAISKRLSELEQQLGVKLLNRTTRTSSLTEAG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLL-PSI--ISQMPPLFT 128 +++ ++ + +L +++ + S +K+A + L L P++ +++ P Sbjct: 63 QVYLNKCKLILDEVDDLHCHISSTSSKLNGVLKLAVPLTFGLKHLVPALDNFAKLHPELK 122 Query: 129 WAIEAIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASD---- 181 I+ D+ +D + +G D S ++ L P I +C S Sbjct: 123 LDIDF--SDKKIDLVEDG-VDLAIRIGSLNNSTLRAKPLAPIH------HVLCVSPDYLT 173 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 EHG LL YS+ G + + + +F +++ + LK +A+ G Sbjct: 174 EHGHITTPNDLKSHKLLRYSQQPLSGVELIDNNNKTMTVPMESFCIANNGDFLKTMAVSG 233 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWRELRE 297 G+ + P++ + +E+ +G L+ + D I+AYA TR P L E Sbjct: 234 HGVLFTPKFIVWEELANGSLIPIMTDYRFNSIKAYAVYPETRYLPRKVRMLIDFLSE 290 >UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T3V7_CAUSK Length = 294 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 15/296 (5%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 +I + F+T+ +F++AA +SQPA + RIR E+++G+ LF+R ++L+ Sbjct: 1 MHITLGQIRAFVTVASTFSFTRAAEVLGLSQPALTNRIRQFEESLGLRLFDRSTRSVELT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 G+ R L+ + E + R + + +++A S + LLP +I++ P Sbjct: 61 NVGRELLPIFRRLVGEFEGAVINARDYASKVKGVVRLACLPSCAATLLPDLIARFQIDNP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 T+ +E +RE + D D + + RLF+ L V EH Sbjct: 121 SATFVVEDALNSRVATMVREDRVDFGIGMADGE--AGDLELTRLFDDTL-QVVHPREHPI 177 Query: 186 ALFNL----AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 A + H+PL+ +R S + L+ + V+ MS + + G Sbjct: 178 AQAPVIDVETLSHYPLILMNRGSSVRDLVEGAFLAAGRTATPACEVTYMSTAV-ALVRAG 236 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLN--RDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G++ LP A+ E+RS V D + R N + PV E F + Sbjct: 237 LGLSILPSTAV--ELRSQPDVAARSIDDPAFVRTLVLVRRRNAPLRPVVEAFIDSI 290 >UniRef50_C3AM26 YwqM (Probable transcriptional regulator YwqM) n=3 Tax=Bacillus RepID=C3AM26_BACMY Length = 304 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 115/294 (39%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ + +++AA +Q + I+A+EQ +G LFNR + L++ Sbjct: 1 MEIRHLKTFKTIVELGGYTRAADYLGYAQSTVTGHIQAIEQEMGQPLFNRLGKKMVLTDV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK ++ E ++ + KI I A SL++ LPSI+ + P Sbjct: 61 GKHLLPYANEMIALSEKAK-QIPSVDNEITGKIVIGAPESLTIYRLPSILHEYKKKYPKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++A E + L+ G D F D + E +L Q+ V D + Sbjct: 120 KITLKASTCRELRNDLKSGNIDIAF-LLDTERHEEDLHIEQLVMEQMAFVFPKD-YTVTQ 177 Query: 188 FNLAQPHF----PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + F L R L R STF S+ E +KQ + G G Sbjct: 178 TDSQDVQFSQEETFLYTERGCSYRAFFEHYLQRQGIQHESTFEFWSI-EAIKQCVMCGLG 236 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 I+ LP + QE + KL + +E Q Y N +P F +R+ Sbjct: 237 ISLLPIITVGQEQKDKKLQAVILNEAKFATQL-VYHKNKWFSPALHEFLMIIRK 289 >UniRef50_Q2RLB0 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLB0_MOOTA Length = 297 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 119/292 (40%), Gaps = 10/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F T+ + ++ S+AA ++SQ + S +I+ LE+ + VELF R ++L+E Sbjct: 1 MNINHLEAFCTVAQVKSISEAARILHMSQSSLSYQIQLLEKDLDVELFTRTTKGVELTEM 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 G+I + + LQ E+ +L Q + + A+ S+ LP I + Sbjct: 61 GEIVYEYGQTFLQLAENLRRDL-DNWKSGQEHLIVGASSSIGSYALPCTIYSFKEKYPDA 119 Query: 129 -WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + +E + KL + D + + + + E +L + + G+ Sbjct: 120 NVKLLVGNREETIQKLLDKTIDIGL--IEGPVDQPGLATRGVTEDELLLIVPAGWQGQES 177 Query: 188 FNLAQ-PHFPLLNYSRNSYMGRLINRTLTRH--SELSFSTFFVSSMSELLKQVALDGCGI 244 L + PL+ S ++I R L H + + + ++ +K G G+ Sbjct: 178 ITLEELCRLPLILREEGSGTRQVIARALAEHGLGIANLNVVLELNSNDAIKSAITAGHGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL 295 + L A ++EI +G L L + Y + ++F+R L Sbjct: 238 SLLSRLATRREIHNGSLKALQVKGISFRSTFTIVYPAGKPATNLQKKFFRFL 289 >UniRef50_B3PFN1 Transcriptional regulator, LysR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFN1_CELJU Length = 306 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 12/296 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T+ L F+ + +FSQAA +++QPA S+RI LE+ + LF+R + L++ Sbjct: 1 MDTQQLQAFVAIANTGSFSQAANQLHLTQPAISKRIALLEEQVKAPLFDRIGRQIALTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+I + + +L ++++ + K+ IA +H + L LP + Q PL Sbjct: 61 GQILLPKAKLILAEVDAAAQAVADLQGTVSGKLSIATSHHIGLHYLPPYLQQFAQDFPLV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE---HG 184 + +D + A ++ +G+ D + H L+ +L V A H Sbjct: 121 KLDVHFLDSELAHQEVVQGRFDLALVTLALEPDIRIASH-PLWMDELQFVAAPSHPLAHM 179 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L H+ + N+Y RLI TL L + V++ + +K + G G Sbjct: 180 QTLNLAQLSHYDAIMPDPNTYTTRLIT-TLFDAEHLPLNIAMVTNHLDAIKMLLGIGLGW 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 LP+ + + + L++ +V P+ A +R ++ A +F L + + Sbjct: 239 GVLPKRLLDSSLSR---LALSQAAIVRPLGAIHHR-QRSLSNAANQFLNLLHQSDT 290 >UniRef50_A1TW95 Transcriptional regulator, LysR family n=8 Tax=Comamonadaceae RepID=A1TW95_ACIAC Length = 314 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 127/309 (41%), Gaps = 26/309 (8%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQV-------- 62 ++ KW+ DF+ L + R+F++AA R+V+ PAF RRIRALE G L R Sbjct: 1 MQLKWMEDFIALAQERSFTRAAELRHVTHPAFGRRIRALEAWAGTALVERGGAQEQDAGH 60 Query: 63 --------TPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLG 114 P++L+ G F + L ++L + ELR + R + IA +L+ Sbjct: 61 PRGRGGAGGPVRLTAAGTAFLATAEQLARELSQSQGELRAIAGRQARSVTIATGRTLART 120 Query: 115 LLPSIISQMPPLF---TWAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHI 167 L + ++ + + + + V+ L G++D +H L + H Sbjct: 121 ALADALPRLRAVLQSAELRVVTNGLAQTVEMLERGEADFWLGYHHAALEVRLDGRSYAHA 180 Query: 168 RLFESQLFPVCASDEHGEALFNLAQ--PHFPLLNYSRNSYMGRLINRTLTRHSELS-FST 224 L +L PV +D G LA P L Y+ +GRL+ L RH Sbjct: 181 TLASDRLVPVSRADSQGLPRHALASSGSAVPYLAYADTLALGRLVEDLLARHPLAPRLRR 240 Query: 225 FFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM 284 ++ + G G+AWLP ++ + ++G+L L + R R+ Sbjct: 241 IIECDSADAQYEYVHRGLGVAWLPWSMVRADCQAGRLAAAGERRLELRFDVRLVRPKRRL 300 Query: 285 NPVAERFWR 293 AE W+ Sbjct: 301 TDAAEAAWQ 309 >UniRef50_A3Y9W7 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9W7_9GAMM Length = 306 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 115/298 (38%), Gaps = 12/298 (4%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + N + + F + + +F++AA + + S ++ LE ++G+ L R ++L Sbjct: 7 MSNNDLNQIRIFTHVAQLASFTKAAEVLGIEKSTVSAKVSQLEASLGIRLLERTTRSVRL 66 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 +E G+ + + L L+ + S I+ A H+L +L S+I Sbjct: 67 TEAGRDYLAYCEQALNTLQQGDDYIHSLSGEPSGTIRFCAPHNLIDFILSSVIEPFLTCY 126 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---D 181 P I ++ DE G D H ++ + LFESQ V + D Sbjct: 127 PKVNLEIHQVNGDEGF---LSGNYDLAIRNHRGEIKDTSLICRPLFESQWVFVISPKQLD 183 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTL-TRHSELSFSTFFVSSMSELLKQVALD 240 E G P + +N+ + + L + +L+F F + Sbjct: 184 EFGYPETPEHLLSQPSIGL-KNASTNKTYDPHLIWQDQKLNFRHRFAVDNMRTVIASIKL 242 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAE-RFWRELRE 297 G G +P+ +++E+ G+LV + +D ++ P Y + P +F L + Sbjct: 243 GLGFGMVPKNMVKEELAQGELVEIIKDIVIPPTSLYLIYPSRVGQPAKLIKFIDALMQ 300 >UniRef50_A8MEQ1 Transcriptional regulator, LysR family n=5 Tax=Bacteria RepID=A8MEQ1_ALKOO Length = 290 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 123/297 (41%), Gaps = 18/297 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F + + + ++AA ++QPA S I LE + V LF+R + L+E Sbjct: 1 MKIRHLRIFKVVCEEESITKAAEKLFMTQPAVSNAISELEDHLKVCLFDRISRRIYLNET 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK+F ++ LL+ E ++ + A I+I ++ +++ +LP I + Sbjct: 61 GKLFLKKVITLLELYEDLEKNVKELEENA--TIRIGSSITIANFILPKSIVEFETMYKNT 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + + + + L + D ++E+L++ PF L +C+ Sbjct: 119 PTKVIVGNAGKIEEMLEHNEIDLALIEGVIYNEELIKIPFSSY-----PLVMICSPKHKF 173 Query: 185 EALFNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 + LL + S + + + L H+ +S + + S+ S+ L Q Sbjct: 174 AQQGPIDINQVIQERLLLREKGSAIRDVFDSALLLHN-ISVNPNWTSTNSQALIQAVKQN 232 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELV-IPIQAYAYRMNTRMNPVAERFWRELRE 297 GI+ LP+ + +EI SG+LV + + + + + + + ++ Sbjct: 233 LGISVLPKILVAEEIASGQLVEIKVKDFELVNMNHIVFHKDKFQTTSFKALVEIIKN 289 >UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV81_ALIAD Length = 305 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 114/296 (38%), Gaps = 9/296 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + ++ L F+T+ + +F++AA ++SQPA S+ ++ LEQ +GV L +R LQ+ Sbjct: 1 MKRVDL-QLRVFVTVVEENSFTRAAEKLHISQPAISQHVQTLEQRLGVRLIDRGRRRLQV 59 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 + G+I + + +L + + + + A+ + +LP +I++ Sbjct: 60 NPAGRIVYEHAKEILALYRRMERLIADMQEMPAGPVHVGASLTYGEYVLPHVIARFRKAY 119 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVC--ASDE 182 P ++ + + Q D +D++E E ++ V AS Sbjct: 120 PAVQPSVSIANTQTIAHAVAVRQLDIGI-VEGQDVVEDEVVLTPFAEDEMLVVASPASPW 178 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + EA S + +R T+ + + S+++K+ G Sbjct: 179 YAEAPDRSLLERATWFIREPGSGTREMTDRLFTQLG-IQPRDLVEYTSSQVIKESVAAGL 237 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 G+A L + + +E+ G L L + + ++ + L E Sbjct: 238 GLACLSRWVVARELAWGMLRTLPIPCAPVKRTFSIVTPKSAFETKASKLLYSFLME 293 >UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=Q1AUB8_RUBXD Length = 320 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 112/294 (38%), Gaps = 16/294 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L FL + + N S+AA ++QP + R++ALE+ +G +LF R ++L+E Sbjct: 1 MLYRQLECFLAVARTGNLSRAAEEMYLTQPTLTARLKALEEELGDQLFVRTSRGMRLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F ++ E L + K+ + A+ + LP ++ + P Sbjct: 61 GREFLPYAERVVSSFEEGKRRLEELRGASGGKLVVGASPGVGTYALPGLLERFVGAYPKV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---- 183 ++ ++ ++ + + + ++ + + L+E +L V A + Sbjct: 121 NVSVRTGHSEDILEMVLREEVHLGLT---REMRHPEVESVPLYEDELVLVVAPEHRFTQR 177 Query: 184 -GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 L + + L+ + +S T T E K++ Sbjct: 178 GSAGLAEIGEEQ--LILFDNDSSYYEQTQALFTSAGIRELRT-LEVDNIEAAKRMVEHRL 234 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELV--IPIQAYAYRMNTRMNPVAERFWRE 294 GIA+LP AI + + +G LV++ ++ R + + F Sbjct: 235 GIAFLPRSAIVRAVSAGNLVLIRVEDGPEMTRSIVALRRRDAPASGPVRAFLEL 288 >UniRef50_C8N722 LysR family transcriptional regulator n=4 Tax=Proteobacteria RepID=C8N722_9GAMM Length = 299 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 120/296 (40%), Gaps = 12/296 (4%) Query: 11 IETKWLYD---FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 +E L D F+ K +F+ AA +++ +RI LE + V L R L Sbjct: 1 MELNNLNDITAFVASVKSGSFTAAAKQLGLTRSTIGKRIARLEARLNVRLLQRNTRNLAP 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 +++G++F+ + +L++L++ L S Q ++KI+A L +LP +++ + Sbjct: 61 TDEGRLFYERCTAVLEELDNAEQCLAQRSIKPQGRLKISAPLVLGKTILPPLLADFLHRY 120 Query: 128 TW-AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD----E 182 ++E D+ D + +G + + + + R Q CA+ + Sbjct: 121 PQTSVELSLTDDYADLISDGYD---LALRNGNPPQCDSLIARTVAQQKMLTCAAPGYLVQ 177 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 HG H L++ + R + + + S F + E L ++AL Sbjct: 178 HGTPQSPDDLAHHQCLHFLHGGRVSRWHFQQKGKETTFQGSGRFSTDNGEALLELALSAF 237 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELRE 297 GI LP Y +Q + +G L + D P+ A Y +++P + E Sbjct: 238 GIVQLPHYLVQAALDAGSLKSVLSDFQPKPVPVMAVYPSRKQLSPKVRALVDMMGE 293 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 112/298 (37%), Gaps = 14/298 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F + K +F++AA ++QP+ + RI+ALE+ +G +LF R+ ++L++ Sbjct: 1 MDVQGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ +LQ ++ + + + + +A + S LLP I+ + P Sbjct: 61 GRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE----H 183 + + + + H A L E + V D H Sbjct: 121 EVLVHTGRSHQVQQLVLDDTVQVGL-VHAPLPSHAEIVSYPLSEEPILLVVPPDHPVARH 179 Query: 184 GE-ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 E L L Q F + R S L+ + + E K++ L G Sbjct: 180 SEVTLDELTQESF--ITTDRASGYWALVEQWWASQGFVP-HITMELDSIEAAKRMVLCGL 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVI--PIQAYAYRMNTRMNPVAERFWRELREL 298 G+ LP ++ EI ++V + +R + A+ F R L E+ Sbjct: 237 GLTMLPYSTVKSEIELSQVVAVPLANSATLKRQNILIHRRGKIWSGTAKAFLRVLEEM 294 >UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIQ6_9GAMM Length = 301 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 7/288 (2%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 L F T+ K NF+ AA ++ A S++I LE +GV L NR + +E G Sbjct: 3 RLDSLIIFTTVVKANNFTNAAHQLGLTPSAVSKQISLLEDRLGVRLLNRTTRSVSPTEAG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WA 130 ++F ++ LL+ LE ++ + +KI+A + +L I +Q + Sbjct: 63 QLFFNRCSRLLEDLEEAEHMVKDLETSPRGTLKISATPTFGRAMLMKIFAQFLEQYPDVN 122 Query: 131 IEAIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D+ +D +REG D S D L+ P ++ A EAL Sbjct: 123 FDLTLADKGLDLVREG-IDLAIHLGSLQDSRLVARPVARQKVILVGSKEYLAEHGQPEAL 181 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 L HF L+ + R I R + + F + + L + AL+G G+A L Sbjct: 182 NELVN-HFILMVSGIDFAEPRWIKRFIKEAGLSNKDRRFTVNDLDTLCEAALNGMGLAAL 240 Query: 248 PEYAIQQEIRSGKLVVLNRD-ELVIPIQAYAYRMNTRMNPVAERFWRE 294 P Y I++ + SGKLV + D + Y N ++ + F Sbjct: 241 PVYMIREHLDSGKLVHILPDIHFPVRTIHVVYPENRYLSAKSRAFVDF 288 >UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=Q2T4U0_BURTA Length = 299 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 116/295 (39%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L FL + + + + A+ +VSQPA +R IR LE+ +GV LF+R+ + +E Sbjct: 1 MNFTHLSAFLAVVEAGSVTGASARLHVSQPALTREIRDLEERLGVVLFDRRPRGMSPTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + + + A L S + +K+AA+ ++ LLP ++ P Sbjct: 61 GRLLAGYAKRIFALTDEAEAALDEFSGLVRGNLKLAASRTIGSYLLPPVLDVFCDRYPGV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 T + ++ + L + F + FD + L V AS Sbjct: 121 TIDVAEMNTELVEAALLTYERQLGF--VEGAYDTTAFDSMVFGRDTLLAVAASSHPLARK 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + +L+ S + H L F+ +E + ++ L G I Sbjct: 179 HRVGVQDIADCDVLSREPGSGTRNAVETAFAEHG-LEFAPRLSVGSAEAMNRLLLRGNAI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELREL 298 AW+ + I+ E+ +G LV L ++ + + ++P A F L E Sbjct: 238 AWVSRFTIEAELEAGALVPLRVTDMTVERDLTIIWHKGATLSPSARIFRDLLVEQ 292 >UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter RepID=B2I0F8_ACIBC Length = 293 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 125/293 (42%), Gaps = 9/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L FL L + N++ A++ ++SQ A S I++LE+ +G +LFNR ++L+++ Sbjct: 1 MTLKQLKAFLALARTLNYANASLELHLSQSALSLTIKSLEEELGGKLFNRNTRRVELTQE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK + LL + +++ + + IA+ ++ +LP +I Q P Sbjct: 61 GKSLIPYAKKLLANWDEMENDVKQRFKLNRGTLSIASMPFVTHAILPEVIHQFLAVHPNL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQ---LFPVCASDEHG 184 ++I I + ++K+++G + F + L + LFE L P Sbjct: 121 NFSIHDIPNETIIEKVQDGIFELGICFEPD--LTEGLEFKPLFEEDFLALLPKSHPLAQS 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ P + + S + L+ + R + ++ L G G+ Sbjct: 179 SSITWHELCSNPFVTLQKPSIVRYLVEQNCLR-NNITLDLKVECHQISSLSSFVAYGIGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 + +P + + + +++ +DE + Y+ N ++ ++ +F L + Sbjct: 238 SAIPRHFAKHIDKEHNVLIDLKDEAIHKTVGIVYKKNFEISNISAQFIEALVQ 290 >UniRef50_C8P2K3 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2K3_ERYRH Length = 300 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 122/296 (41%), Gaps = 13/296 (4%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + F+ + + +FS+AA + +Q A + +I+ LE+ + +LF+R + L+E Sbjct: 4 HMNLRHFQTFVKVVEKESFSKAADALGYTQAAVTIQIQQLEEELQTKLFDRMNRKIHLTE 63 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPL 126 +G+ F +L+ +E + I++ SL + P +I P Sbjct: 64 EGEAFIFYANEVLRTVEEARI-FNQSAKKEHGTIRVGTVGSLGSSVFPELIYNFHREHPN 122 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFE-SQLFPVCASDEHGE 185 + +E + +R + D +F+ D D +++FE + ++D Sbjct: 123 VEIKVIIGKTEELLGMVRRNEIDILFTL---DYQIYGADMVKVFEKEESILFVSADASVS 179 Query: 186 ALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + F P L + + R+L + + + +E++ V G Sbjct: 180 STKTYNLEEFSDAPFLLTEQGEAYRYELERSLAK-RRVDLNAILEVGDTEIIIAVLKKGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 G+++LPE+++++E+ L + D + + A Y + + F +E+ + Sbjct: 239 GLSFLPEFSVKEELEQQILKEVRVDIPSVSMYAQVLYHKKKFLTTHMKAFIQEIDQ 294 >UniRef50_A9I640 Transcriptional regulator, LysR-family n=4 Tax=Bordetella RepID=A9I640_BORPD Length = 304 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 15/296 (5%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + K L D + L + +F +AA R+V+ PAF RRIRALE G L RQ P+ L+ QG Sbjct: 3 DLKLLEDLIALAQTGSFVRAAELRHVTHPAFGRRIRALEAWAGTPLVQRQRAPVILTPQG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT--- 128 + +++++E +RG + ++IA SL+ L+ I+++ Sbjct: 63 EALLKAATQVVERMEQVRHRIRGAGAAGEPVLRIATGRSLARTLVADWIARLRHRSPKVL 122 Query: 129 -----WAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLFPVCA 179 + + E V ++ +G+ D + + L + ++ L +L PV Sbjct: 123 TDGAQVELSTGMMKELVARMEQGRIDLLCCYEHPALSVQLSPERYRYMTLGIDKLVPVSQ 182 Query: 180 SDEHGEALFNLAQ--PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQV 237 +D G + L + P PLL Y+ M R++ L + + F + + Sbjct: 183 ADTRGRPRYALRETGPGVPLLTYAGGLSMERILGDRL-EAMPYALAPFMRIDSLDAAHGL 241 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 L G G+AWLP + + R G L L I + YR R+ +AE W Sbjct: 242 VLKGLGVAWLPWSMVAGDCRRGVLAALGGRSEEISFEVRLYRSRARLADLAEAAWD 297 >UniRef50_C3RIV9 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RIV9_9MOLU Length = 304 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 126/306 (41%), Gaps = 19/306 (6%) Query: 2 DDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQ 61 + L I K L F T+ K ++ S+AA +SQP S++I+ +E V+LF R Sbjct: 7 SNSTGGLKMITRKHLAIFKTVAKTKSMSKAAKLLYISQPTISQKIQEIEDEYQVKLFERY 66 Query: 62 VTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS 121 L +SE+G+ + +L + + +KI A ++ L+ I+ Sbjct: 67 SKTLFISEEGQTLLVKANQILNLYDEIEHIFTKTKQFP---LKIGATLTIGSTLISPILK 123 Query: 122 QM---PPLFTWAIEAIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLF 175 ++ T+ + + + +KL D + ++DL+ P + + ++ Sbjct: 124 KLKDKYQDITFQVYIDNTNVIEEKLLNNTLDIALVEGTIINQDLIVEP-----VIKDRVV 178 Query: 176 PVCASDEHGEALFNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSE 232 VCA D + ++ P ++ + S ++ L +++ + + E Sbjct: 179 FVCAQDYPLNNVKVMSLTELSLHPFIDREQGSGTRNQLDECL-KNNNIFLEPAWQCHSWE 237 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERF 291 +KQ L+G GIA +P I+ E+ + V+N + + I Y N +N + F Sbjct: 238 SVKQAVLNGHGIALMPMKIIENEVIEKSIQVINVNNISIERDFSICYHKNKSINKKMQAF 297 Query: 292 WRELRE 297 + + Sbjct: 298 IKTCKN 303 >UniRef50_UPI0001AEC4E8 probable transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC4E8 Length = 294 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 128/292 (43%), Gaps = 12/292 (4%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ + + F+ + K F++AAV+ +++QPA S I+ +E+ +G +LF R + L+ Sbjct: 1 MDVSYRQIKAFVEVAKSSTFAEAAVNLHLTQPALSSAIKKMEEQLGGKLFQRNTRNVSLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 +G++ LL ++ ++++ A+ ++ I A S + LP+I+S P Sbjct: 61 PEGEVLFPNALRLLHDWDNTFSDIQNLFAMAKGQLTICAMPSFAESHLPNILSVFHQRIP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV---CASDE 182 I + +++ + ++ G+S+ FSF E F LF + V S Sbjct: 121 NVNLRIVDVVMEQVIHEVTTGRSEIGFSFEPERKDGLVFKS--LFADEFVVVTNKAQSAH 178 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 G+ L PL+ +R S + L ++ EL+ + L ++ L+G Sbjct: 179 LGDKLHWQDCLKLPLVMMNRGSAVRHWTQSKLAQYGELNI--IAETGQLSTLGKLILNGL 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWR 293 GI+ +P + ++ LV ++ + R + ++ A+ W Sbjct: 237 GISIMPA-ICKAQMEGLGLVTKEISDMPLVKNIGIIRNARKGLSLPAQSMWD 287 >UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q31FC6_THICR Length = 318 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 110/295 (37%), Gaps = 16/295 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F T+ K +F++AA + +++QPA + +++ LE+ LF+R + L++ Sbjct: 1 MADRRLQVFYTVAKVLSFTKAAETLHMTQPAVTFQVKQLEEFFNTRLFDRTHNKITLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 GKI + +L E +E+R + + I A+ +++ +LPS++ F Sbjct: 61 GKIVYDYAEKILDHYEKMNSEVRELTGEVTGSLLIGASTTIAEYMLPSLLGAFKKQFEDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + D V + D + RL ++ + HG L Sbjct: 121 NIRLQVGNTDAIVAMVENNMIDLGVVEAPVYNKNLEVEVCRL--DEMVLIVP---HGHPL 175 Query: 188 FNLAQ------PHFPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVAL 239 N + + ++ S +I+ + + E +K Sbjct: 176 SNRDKISIEDMRKYRYISREEGSGSRSVIDNYIREQGLSYSDLNVVMELGSPEAVKMAVE 235 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRE 294 G+A + I +E++ G L L D + ++ + + + Sbjct: 236 SDVGLAIVSRTTISKELKLGTLKALPLDPPLNRPFSHVRQKHKFRHRAVGELLDF 290 >UniRef50_B7JB31 Rubisco operon transcriptional regulator n=5 Tax=Acidithiobacillus RepID=B7JB31_ACIF2 Length = 332 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 116/298 (38%), Gaps = 11/298 (3%) Query: 5 GAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTP 64 G + + L F + + +F++AA +++ PA S ++R L +A+G LFN+ Sbjct: 24 GMSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFNQIGKK 83 Query: 65 LQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM- 123 + L+ G+ S +L +LE E+ + +K+A + + +P I+ Sbjct: 84 IYLTPAGEALTSACHDVLDRLEYFTQEIAALQGLEKGSLKVATLST-AKYFIPRIMGGFC 142 Query: 124 --PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD 181 P A+ + + +++L Q D + ++ L V SD Sbjct: 143 TEHPGVATALFIGNREALLERLARNQDDLYILGQPPE--HINVVAEAFADNPLVVVSRSD 200 Query: 182 EHGEALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 + +L P + S + +H + T +E +KQ Sbjct: 201 HPLASEKDLEPSRLRDAPFILREPGSGTRLAAEKFFEQHGVV-LRTRMEFGSNEAVKQTV 259 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWREL 295 G GIA L I E+ SG+LV+L+ + + YA + ++P+ F L Sbjct: 260 AGGLGIAVLSASTIHAELASGELVILDVRGFPLERKWYAVYPAGKLLSPIVRAFMGCL 317 >UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65FY0_BACLD Length = 297 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 112/293 (38%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ F++AA +Q + ++A+EQ + LF R + L+E Sbjct: 1 MEIRHLKTFKTIVDIGGFTRAADYLGYAQSTVTSHVQAIEQELRKPLFYRLGKKMMLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK +++ E + + I A+ SL++ LP+I+ + P Sbjct: 61 GKHLLPYAAEMVELYEKAR-HIPENDQEPSGNLIIGASESLTVYRLPAILHEFTSKYPQV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 T +++ + D+L++G+ D F D D E +L + + EH Sbjct: 120 TVTLKSSTCWQLRDELKQGKIDVAF-LLDNDRKENDLHVEKLVNEPMVFIF-PKEHPAGQ 177 Query: 188 FNLAQPHF----PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 L F L L + ++ T S+ E +KQ + G G Sbjct: 178 KALDDLTFNANETFLYTEHGCSYRDFFEEYLRQRGVIADHTMEFWSV-EAIKQCVMCGLG 236 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 ++ LP + +I GKL + + Q Y N ++P F +R Sbjct: 237 VSLLPLITTRTDIEEGKLQGTLVRDALFSTQM-VYHKNKWLSPAMAAFTDIVR 288 >UniRef50_Q5ZT74 Transcriptional regulator, LysR family n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZT74_LEGPH Length = 306 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 119/295 (40%), Gaps = 7/295 (2%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + LY F + + R+F++A S +++ SRRI LE +GV L +R L L++ G Sbjct: 4 DLNDLYFFYLVVEQRSFTKAGRSIGITKSKISRRISELESRLGVRLLHRSTRKLALTDIG 63 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAI 131 +IF+ + ++ + +S + + +I++ + II++ + Sbjct: 64 QIFYQHCKAMVDEAQSAQEAIELVQSKPRGRIRVTCPALFAQSTFTDIITRFMQQYQEVT 123 Query: 132 EAID-VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEAL 187 ++ D VD +EG D F ++ +L S + + + HG Sbjct: 124 IVLNATDRPVDLFQEG-FDVAIRFQANTFEDSTLVVRKLGLSFSSLIASPTYLNHHGTPQ 182 Query: 188 FNLAQPHFPLLNYSRNSYMGR-LINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 + +RN M + L+ R + F S+ +LKQ AL GI Sbjct: 183 TPQDLVNHACFAKTRNEGMSQFLLTHNDGRQISVHFQPILESNEWLVLKQAALSHLGITM 242 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELRELEI 300 +P+ ++EI SG LV + + + Y + R + P F + E I Sbjct: 243 MPQEICRKEIDSGLLVPILTEWSLPKASLYIIYPSRRGLIPAIRSFIDFVAEELI 297 >UniRef50_B5HHH0 YwqM n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HHH0_STRPR Length = 297 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 110/299 (36%), Gaps = 13/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + +F+QAA +Q + + ++R+LE ++G ELF+R + ++L+E Sbjct: 1 MEIRLLVTFEKVAAHLSFTQAAAELKYAQSSVTSQVRSLESSLGTELFDRLGSRIRLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ R +++ E A + +D I I SL+ LP ++ P Sbjct: 61 GERLVPYARRIIELSEEARAAVAE-TDEPAGTINIGTMESLTSYRLPELLELFHHRYPRI 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ DE LR+G D F E L L V A Sbjct: 120 KLSLRPTLGDETRRALRQGVYDIGFLMERET-EHTGLRSEVLAPEPLVLVAAPGHPLAGA 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L P L+ L L + F E K+ G G+ Sbjct: 179 GGLTTPDLADAQLVGTEPGCPYRDLFENELRERTGAPP-PFMEFGTIEATKRGVAAGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW----RELRELE 299 A LP ++ E+ SG LV L + A+R R+ F R +RE E Sbjct: 238 ALLPRMTVRAELASGVLVALPWEPPFRLHTQVAWREGKRLPRHVRLFIDETVRLVREQE 296 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 128/293 (43%), Gaps = 11/293 (3%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 + F + + +F++AA+ ++SQPA S I+ LE+A+G +LF R + L+ +GK Sbjct: 5 INQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLTPEGK 64 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTW 129 F+ R LL E +L ++R + K+ IAA + ++ LLP I++ P Sbjct: 65 AFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYPNINV 124 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE---A 186 + + + V+ +RE + + +F +D + F LF + + + Sbjct: 125 TVHDVIAESVVEMVREHRCELGVTFDPDDSPDLTFQ--PLFIDRFIAIFPKQHPLLGKGS 182 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 L +P ++ + + I++TL + L + F S + ++ +G G++ Sbjct: 183 LRWRDLLDYPHISLQKPAGTRARIDQTLAKKG-LRITPAFESHQLVSIGRMVREGLGLSV 241 Query: 247 LPEYAIQQEIRSG-KLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 +P + Q G + + + + R T ++ A+ +RE+ Sbjct: 242 VPSTSRAQMKEMGLECRAIAFPVITHQLGVITRRQQT-LSVAAQAMASLIREM 293 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 117/293 (39%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F+ + K +NF++AA + +++QPA S ++ LEQ + + LFNRQ + L+ + Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+IF + +L L + E+ ++ ++++ +S P II P Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + +G+ D + R ++ D Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGV--VAGGNFPETLEVRRFLREEIVICVPPDHPFAQR 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +++ F PL+ Y Y+ L + + F +++ L+K + +G GI Sbjct: 179 KSVSLVEFIREPLVFYKEGYYIREFFLEVLKGAGS-APNIVFETNLFSLVKSLVRNGTGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 + + + LV + D + A++ +T ++ F L + Sbjct: 238 SIFLRMVVAADTD---LVAVPFDPPLHLDLLIAWKKDTYLSLANRAFVDFLLQ 287 >UniRef50_Q11EY5 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11EY5_MESSB Length = 328 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 14/289 (4%) Query: 18 DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQ 77 F+++ + +F++AA N+ SR++ LE ++GV LF+R + L+E GK++ + Sbjct: 22 AFVSVAEHLSFAEAAEELNLKSSTISRQVSKLEDSLGVRLFSRTTRRVSLTEAGKLYLKE 81 Query: 78 IRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WAIEAIDV 136 R LL+ L A + + + ++++ +L L S I+ L+ IEA Sbjct: 82 CRSLLKNLTDMDAMVSSLNAEPRGCLRVSLPVALGRLYLNSTITAFLNLYPNLQIEADFS 141 Query: 137 DEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEALFNLAQP 193 D VD + EG L + ++ ++ V + +HG Sbjct: 142 DRFVDIVGEGYD---LVVRTGTLPSSGLIAKKIASNKRVLVASPRYIAKHGVPATPQDLA 198 Query: 194 HFPLLNYSRNSYMGRLINRTLTRHSE---LSFSTFFVSSMSELLKQVALDGCGIAWLPEY 250 L +S + G N L +H + + + FVS+ S+ + + A+ G GIA + Y Sbjct: 199 DHNCLRFSHYASSGS--NWQLAKHEQREVVEVNGNFVSNSSDAICEAAVGGLGIALIASY 256 Query: 251 AIQQEIRSGKLVVLNRDELVIP-IQAYAYRMNTR-MNPVAERFWRELRE 297 I+SG LV L P Y +TR + P + F L + Sbjct: 257 LAHDGIQSGGLVCLLPGWTSQPEAGIYVMYPSTRYLTPKVKAFTSFLEK 305 >UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=Gammaproteobacteria RepID=C6C726_DICDC Length = 335 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 109/295 (36%), Gaps = 16/295 (5%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + L F+ + + +FS A N+S+ A S+R+ LE+ +GV L +R L L+E G Sbjct: 3 DFSSLPVFVAVVESGSFSAAGKRLNLSKSAVSKRLSQLEERLGVRLLHRTTRQLSLTEAG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAI 131 ++ + LQ + + + Q ++++A + L + ++ P+F Sbjct: 63 SDYYDYAQRALQLAQQAEDAVTQLQERPQGTLRVSAPMAFGLRHISPLL----PIFLHRY 118 Query: 132 EAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFP----VCASDEHGE-- 185 + VD +D + D + D + L +L P +CA+ ++ + Sbjct: 119 PEVSVDLLMD---DRVVDLVGEGFDLAVRIGQLPDSSLIARRLAPCFSVLCAAPDYLQRT 175 Query: 186 --ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 A H L Y + ++ SE L L G G Sbjct: 176 DVPQHIDALKHHNCLFYLYFKGGVEWSFEGPDGPVRFQPHGNYRANNSEALFDALLAGVG 235 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELRE 297 I +P++ + + G+LV + + YA R P F L + Sbjct: 236 ICQVPKFIVGPALSEGRLVEVLPQYRLPEHSIYAVYPERRHLPAKVRVFIDFLSQ 290 >UniRef50_UPI000178A79D transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A79D Length = 291 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 118/294 (40%), Gaps = 14/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +L F + ++F++AA +Q + + +I+ LE+ GV+LF R L+L++ Sbjct: 1 MELIYLQTFREVAVRKSFTKAADELGYAQSSVTTQIQKLEKEYGVKLFERYGRGLRLTKS 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ +L + + +L + + I SL+ LPS++ ++ Sbjct: 61 GEELFKYAVQMLDLFQQSKEKL---TKQGGGILSIGTIDSLAAYFLPSVLHRLRQEHEDL 117 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ D V K+REG+ D ++ + + I + E L + D L Sbjct: 118 AIRLQTDREDSIVSKVREGEYDLGLILENKPEDTS-LNWISIREEPLHLIAHPDHPLHRL 176 Query: 188 FNLAQPHFPLLNYS----RNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + H L +Y ++ R++ + R S E +K+ + G G Sbjct: 177 PVIELEH--LADYEWIMTEDTCNYRIMLEKVLRASGAPVRIGLELGNPEAIKRYIMSGTG 234 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 I+ LP ++EI+ G+L +L I + ++ + L+ Sbjct: 235 ISLLPRMVAEEEIKRGELAILPFQHPDIRLDIQIVVHPKKWLSHSLQDMIEMLK 288 >UniRef50_A3QF96 Transcriptional regulator, LysR family n=10 Tax=Gammaproteobacteria RepID=A3QF96_SHELP Length = 304 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 122/300 (40%), Gaps = 17/300 (5%) Query: 6 AILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPL 65 L I+T + F + + +F++AA +S S+ + LE+ + V L NR + Sbjct: 1 MALDRIDT--MKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRV 58 Query: 66 QLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP 125 ++E G+ + + + +L +E L S+ A +K++A S + LPS + Q Sbjct: 59 NVTEAGRAYFERCQQVLIDIEEMDNALTNLSETASGLLKVSAPMSFGIHHLPSALVQFQQ 118 Query: 126 LFT-WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 ++ D+ VD L +G D L + +L +L VCAS E+ Sbjct: 119 QHPDVRLDITLTDKKVDLLEDG-VDVALRI--GQLTSSSLIAKKLTPIKLV-VCASPEY- 173 Query: 185 EALFNLAQPHFP--LLNYSRNSYMGRLINRTLTRHSE----LSFSTFFVSSMSELLKQVA 238 L +P P L++++ + + R E L + + ++L + A Sbjct: 174 --LAERGEPKTPADLIHHNYLHFSYSDLGAAFGRFGEHFSALKIPSDLACNNGDMLVEAA 231 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRE 297 + G GI P + + + +RSGKL + D P YA + F L + Sbjct: 232 IAGRGIVVQPTFLVSKALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDALSQ 291 >UniRef50_UPI0001C34DF6 LysR family transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34DF6 Length = 337 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 128/299 (42%), Gaps = 13/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L F+ + + +FS+AA ++QP S + +LE+ + V LF R + L+E+ Sbjct: 34 MNLKQLEAFVEVAQSGSFSKAARRLYLTQPTVSAHVLSLEKELDVRLFVRNTKEVGLTEE 93 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ + ++ + E ++ + IAA+ + LLP ++++ P Sbjct: 94 GQRLFFHAKQMVDLEKKIEEEFGQWRGEEKQCVAIAASTVPAQYLLPPLLARFNMKYPGE 153 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I +D + V+++ E ++D F+ L + ++ + ++ + + E ++ Sbjct: 154 QLKITEMDSSQVVEQIAERRADIGFTGT--VLEKKHCKYLPFYGDEMVIITPNTEKYRSI 211 Query: 188 FNLAQP-----HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSS--MSELLKQVALD 240 N ++ ++ S + + + V+S E +K+ + Sbjct: 212 KNTSKDISWIRKEHMILREEGSGTRKEAEKQFRSLGIMPEELNVVASIGNQETIKKSVIQ 271 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELREL 298 G GI+ + A+++E SGK++ Y N +++ A+RF + ++E+ Sbjct: 272 GLGISVISSLAVREETESGKILAFPIPSERAGRDINVVYNRNCQLSRSAKRFLKTVKEV 330 >UniRef50_B2T1K1 Transcriptional regulator, LysR family n=63 Tax=Burkholderia RepID=B2T1K1_BURPP Length = 367 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 10/294 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + + F+ + +F++AA + ++S +R + LE +G L NR L L+E Sbjct: 1 MDHLQSMRVFVKVADLGSFARAASAMDISNAVATRHVADLEGRLGTRLLNRTTRSLSLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTW 129 G+++ + R +L +LE + + ++I A L L ++ + Sbjct: 61 SGQVYLERARQILDELEDVEQMVVARNHEPVGTLRIVAPVVFGLHNLAPVLQTYAERYPK 120 Query: 130 AIEAID-VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALF 188 I + VD VD + EG D + + + R + VCA+ + E Sbjct: 121 VIPDVTLVDRQVDLVEEG-FDVGVVIARQ--MRSASIVTRRLTTGCMTVCATPAYLEKHG 177 Query: 189 NLAQP----HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +P P L+ + + + S V++ +E+L+Q AL G GI Sbjct: 178 MPTRPEHLLEHPCLSLPSEYWGDERVFTGPEGEVRVRPSNVIVANNTEMLRQFALLGMGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELRE 297 A LP Y I +++ G+LV L D + ++ + R P F L E Sbjct: 238 AILPSYLIGRDMTRGRLVRLLGDYRLPQVEINIAYPSRRHLPAKVRTFIDHLVE 291 >UniRef50_A5N2N1 Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5N2N1_CLOK5 Length = 298 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 107/290 (36%), Gaps = 10/290 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + +++S+AA +Q + +I+ LEQ + ++LF R ++L+ + Sbjct: 1 MELRNLITFCKITHLKSYSKAAKELGYAQSTITTQIQLLEQELNIKLFERIGRSIKLTSK 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G IF ++++ + +D ++I SL LP ++ P Sbjct: 61 GLIFLKYAQNIVNLAHEAKEAI-NDTDIPTGTLRIGTVESLCTMKLPELLRNYHKKYPDV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I+ + D L+ D IF D+ ++++ + + + + Sbjct: 120 EIIIKLGICSDLRDMLKNNIVDLIF-ILDDPVMDSDLISCMSYNEPMAVLASPLNKLAYK 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 NL PL+ + S LS E +K + GI Sbjct: 179 NNLTIEDIKDEPLILTESGCSYRNAFEKIFHE-SGLSPHLSLEVGNVEAIKNFTMSNLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWR 293 LP +++E+ L++L+ + + Y N + + F + Sbjct: 238 TLLPVMTVKKELAKKNLILLDLEGCEFNMMTQMLYHKNKWITAAMKTFIQ 287 >UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSG7_AZOVD Length = 299 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 115/293 (39%), Gaps = 10/293 (3%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 +L +I + L F+ + + +F++ + ++SQPA S IR LE A+G+ L R ++ Sbjct: 1 MLMDISFRQLRAFILIAETSSFTRTSEQLHLSQPALSYSIRKLEDALGLRLLARNTRSVE 60 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--- 123 L+ G+ F Q R +L+ ++ + + + + I++ A + + LP +I+ Sbjct: 61 LTPAGEHFLPQARRMLRDMDDAIRDAHEALNLIRGTIRLGALPTAAASFLPGVIAAFGRD 120 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 P ++ E ++ G+ D + EDL F+ + L + Sbjct: 121 HPGVKISLRDGRAGEVKAWVQNGEVDAGITSLPEDLSGLGFEPLLDDNLVL----LVRQE 176 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 G + P + + ++ + L + L RH ++ + + + +G G Sbjct: 177 GASKEPDTWKTLPYIALTADTSIRPLADEAL-RHLGVTTQPAWEVAHMSTAAALVREGIG 235 Query: 244 IAWLPEYAIQQEIRSGK-LVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 + LP + G L VL ++ R P + F L Sbjct: 236 FSLLPASC-TTFLHIGADLSVLPIEQPTRRSLGLLQRKPIGQTPSMKAFLSHL 287 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 121/292 (41%), Gaps = 16/292 (5%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F T+ + +F++AA V+QPA ++ I+ LE +G LF+R+ + L+ G + Sbjct: 6 LTVFYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTAGNVLL 65 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTWAIE 132 ++ +L ++++ A+ +++ ++P+++++ P T ++ Sbjct: 66 RHAETIMGVYRQIEFDLNELKGKPGGRLRLGASSTIAQYVIPAVLARFGEQFPDVTLSLL 125 Query: 133 AIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFN 189 + + ++ L + D H D+ PF + +L VC +D Sbjct: 126 SGNTEQIEQALLHDEIDLGLVEGRTHHSDVRYTPF-----VKDELVLVCRADHPLAGRDE 180 Query: 190 LAQPHF---PLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGCGI 244 + PL+ S ++ L +E +K G+ Sbjct: 181 ITLDELKTVPLVLREPGSGSREVVEHALRGAGLRLAELQQAMQLGSTEGIKTYLSSSSGM 240 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 A++ +A+ E++SG L VL+ +L I YA ++ +A+ F R +R Sbjct: 241 AFVSIFAVPNELKSGTLRVLDVADLTIERDFYAIQLQGMSEGLADTFMRFVR 292 >UniRef50_Q2WAU7 Transcriptional regulator n=7 Tax=Proteobacteria RepID=Q2WAU7_MAGSA Length = 309 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 114/290 (39%), Gaps = 18/290 (6%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 + F+ + + +FS+AA +S+ SR++ ALE +GV L +R L +E G+ + Sbjct: 8 IIAFVRVAETGSFSEAARRLGLSKSMISRQVSALEADLGVRLLHRTTRSLSPTEAGRAYL 67 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WAIEAI 134 + + +L L+ + + +++++A S +G L + + + +E Sbjct: 68 ERCQRILADLDEANLLVSHLQAVPRGRLRVSAPLSFGIGHLSACLPGFLERYPEIELEMG 127 Query: 135 DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV----CASDEHGEALFNL 190 D VD + EG D + L +L PV AS + E Sbjct: 128 FTDRHVDLVEEG--------WDLAVRIGRLADSSLIVRRLAPVRRMAAASPAYLERRGTP 179 Query: 191 AQPH----FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 +P L + + ++ F + ++L+ +AL G G+ Sbjct: 180 RRPEELSAHDCLTHGGRVQSEWRFTGDDGKPVQVEVRGRFHADNGDVLRDMALAGLGVVL 239 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWREL 295 LP + + +IR+G+LV L + + A Y ++P F L Sbjct: 240 LPSFFLGDDIRAGRLVPLLEAYVPLDSSLNAVYPHGRHLSPKVRAFVDHL 289 >UniRef50_C6C230 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C230_DESAD Length = 295 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 9/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L FLT+ + NF++AA ++Q + S +I+ LE+ +GV LF+R + L+E Sbjct: 1 MEIRQLKTFLTVAERLNFTRAAKDLYLAQSSVSAQIKLLEEDLGVRLFDRIGRGIVLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ R +LQ E L GG +Y I I ++ +P +I P Sbjct: 61 GEMLRDYARRMLQMSEEVRDGLSGGRNY-SGTITIRMPETIGSEYMPEVIEAFSSEYPNT 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDE-DLLEAPFDHIRLFESQLFPVCASDEHGEA 186 D + ++L G+ D F + +R L C G+ Sbjct: 120 QIVFNNCDDEHLKEELNSGRIDAAFLMSSSLSFNSVTVEALRPEALTLAASCGHPMAGKG 179 Query: 187 LFNLAQ-PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + + A LL + R R+L ++ + S F S ++L G GIA Sbjct: 180 VLSDADMQGQTLLQLRVDUSYRRDFKRSLETNNVQTKSIIFSSGRAQL--NCLRRGMGIA 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWRELR 296 PE + ++ G LV L + +P +RF + Sbjct: 238 LCPERVLARDFEKGTLVRLEWSPAPTETMIMVITHVDKWSSPPLKRFLELAK 289 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 119/292 (40%), Gaps = 15/292 (5%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ + L F + + ++++AA ++SQPA S ++R LE IG+ LF R + L+ Sbjct: 1 MHVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSL--GLLPSIISQMPPL 126 E G+ R + Q L L ++ ++IA A +++ L +I Q Sbjct: 61 EAGREVFHYSRAIGQSLREMEEVLESLKGVSRGSLRIAVASTVNYFAPRLMAIFQQRHSG 120 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 ++ + + V L D + +E + F V A +H A Sbjct: 121 IGLRLDVTNRESLVQMLDSNSVDLVLMGVPPRNVEVEAEA---FMDNPLVVIAPPDHPLA 177 Query: 187 ------LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 L LA+ F + S + + R + + + + +E +KQ Sbjct: 178 GERAISLARLAEETF--VMREEGSGTRQAMERFFSERGQ-TIRHGMQMTRNEAVKQAVRS 234 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERF 291 G G++ + + I+ E+ + +LV L+ + Q Y YR R++P A F Sbjct: 235 GLGLSVVSLHTIELELETRRLVTLDVEGFPDRRQWYLVYRRGKRLSPAAGAF 286 >UniRef50_P39127 HTH-type transcriptional regulator citR n=3 Tax=Bacillus subtilis group RepID=CITR_BACSU Length = 291 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 129/296 (43%), Gaps = 13/296 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL+ F+T K NF + A + +SQP + I+ LE+ I +LF R+ +QL+++ Sbjct: 1 MDFKWLHTFVTAAKYENFRKTAETLFLSQPTVTVHIKQLEKEISCKLFERKGRQIQLTDE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ + LL E+++AEL + +++A + ++ +LPS++ + Sbjct: 61 GRAYLPYALRLLDDYENSMAELHRVRQGYSQTLQLAVSPLIADTVLPSVMKRYTAMNTET 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 A+ + E ++ G++D S + + L++ + V D+ Sbjct: 121 EMAVTIFESAEIASLIKAGEADIGLSCL--KVQSSSLSCHCLYKDPVVLVAPPDKRFIED 178 Query: 188 FNLA----QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + + LL ++ Y L+ + F + + + K+ +G G Sbjct: 179 NEIDAKEVLEQYLLLTHNHPDYWDDLLRQV---RMTFPFVRTMKVTQTHITKRFIKEGLG 235 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 +++LP +++E+ +++ + + +P A AY + N ++F L Sbjct: 236 VSFLPLSTVKRELAEKQMIRIPYQSVQLPY-AGAYAIALYENKKEKKFLDFLSHFH 290 >UniRef50_A8RTH6 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8RTH6_9CLOT Length = 299 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 120/291 (41%), Gaps = 9/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L F T+ FS+AA N +Q + ++ LE+ + LF + + L++ Sbjct: 1 MELKCLRTFRTIIDEGGFSKAAKKLNYTQSTITFQMNQLERDLSTTLFEKIGRKMVLTKA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ + +LQ ++ L+ L Q I+I SL LP+I+ + P Sbjct: 61 GEHLIPYVDDILQSVDK-LSFLGEHLSEYQGDIQIGVGESLLCYKLPAILKEFHRQAPKA 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHG 184 + +++ + D+L G D + D + L + + V + + + Sbjct: 120 RLFLRSMNCYDIRDELFSGGLDLGVFYEDVGGFGSNLAVKPLGDYPVVLVASPEIQNRYP 179 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + PL+ N ++ + L S + T + S+ +K + + G+ Sbjct: 180 DFVTPDRTIPLPLIINEPNCIFRQIFEQYLRDKSIILDHTIELWSIPT-IKNLVKNNVGV 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRE 294 ++LPE+ + +E+ G+LV + I A+ N ++P+ + F Sbjct: 239 SFLPEFTVTEELNRGELVKIPTTISGTKITAVCAHHKNKWVSPLMQLFISL 289 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 125/294 (42%), Gaps = 17/294 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F TL + ++ ++AA S +++QPA SR I LE +GV LF+RQ + L++ Sbjct: 1 MEWEQLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQY 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G IF +++ ++++ E++ Q + + H+L L+P +I P Sbjct: 61 GHIFLRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 ++ ++ +++L+ G D E P I+L+ +LF +D Sbjct: 121 SFQLKQNHSYWLLERLKSGDLDL--CLLASIKPENPIQWIKLWSEELFVFVPNDHPLASR 178 Query: 186 ---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 L +A F LL + Y R+ L + + + F + G Sbjct: 179 ESITLNEIAGERFILL---KKGYALRMTVDELFEKANIQPNIMFEGEEATTAAGFVAAGL 235 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELV-IPIQAYAYRMNTRMNPVAERFWREL 295 GI+ LP+ + + K+ + + A+ ++PVAE F + + Sbjct: 236 GISILPDL---KGLDQSKITKIRVSWPECQRVIGIAWIKGRFLSPVAETFKQYV 286 >UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A0L4T1_MAGSM Length = 307 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 109/299 (36%), Gaps = 12/299 (4%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + +T+ L F + K +F++AA ++QPA + +IR LE+ LF+R + L Sbjct: 1 MSFSDTR-LRVFYAVAKHLSFTRAAEELYLTQPAVTFQIRQLEEHFDTRLFDRHHNRISL 59 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 +E G +S +L + + + +K+ A+ ++ LLP I+S F Sbjct: 60 TEAGLEVYSYAERILDLYRETEKAVSELTGVTRGVVKVGASTTIGEYLLPRILSDYRDQF 119 Query: 128 T---WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + + V KL + D + + + +L + + Sbjct: 120 NDVQIRLSIDNTRTVVRKLEDATIDVG--MIEGPVKNKNIARDGCLDDELVVILPPNHPL 177 Query: 185 EALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVAL 239 L + +P ++ S ++++ L +E +K Sbjct: 178 CDLDEIPVKELKAYPFVSREEGSGTRQVVHDHLLHAGLPYDQLDIVLELGSTEAVKGSVE 237 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 G GI + ++ +E++ G LV + I + ++ + E F ++ Sbjct: 238 GGIGIGIVSSASLIKELKLGILVAKRVQGMRITRTINFIHQKQKFRSKAVEAFINFAKD 296 >UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=Clostridia RepID=Q3AG03_CARHZ Length = 302 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 30/302 (9%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + K +F++AA +V+QP+ + I LEQ + V+LF+R + L+++ Sbjct: 1 MEFRQLEYFYAVSKLNSFTRAAEQLHVAQPSITIAINNLEQELKVQLFDRSKRKVVLTDE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK+F + +L+ ++ +EL +Y + IK+ + L P I P Sbjct: 61 GKLFLQHVEKILKDVKKAQSELEDLKNYKKGVIKLGIPPMIGAYLFPKIFKGFKNAYPHL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---- 183 + V L G+ D E + + + Q+ +C S+ H Sbjct: 121 ELHVREEGSWAMVSLLENGELDLGLIILPEQ--SENLCMLPITKDQIV-LCVSENHRFSQ 177 Query: 184 --GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 +L L F LL +SY I L + S + S E +K++ +G Sbjct: 178 EKRISLRQLEDEQFILLK--EDSYTRHKI-IALCNYYGFSPNILLSSCQIETIKELVSNG 234 Query: 242 CGIAWLPEYAIQQEIRSG------KLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 GI +L +G K+V + +E + A++ + ++ A+ F + Sbjct: 235 LGITFLM---------NGITKKWDKIVSIQLEEPMNITIGLAWQKDRCLSRAAQAFIGFV 285 Query: 296 RE 297 + Sbjct: 286 QN 287 >UniRef50_A9AUC8 Transcriptional regulator, LysR family n=2 Tax=Chloroflexi (class) RepID=A9AUC8_HERA2 Length = 300 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 122/294 (41%), Gaps = 10/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F+ + RNF++AA +++QP S++I+ LE+ +GV LF R ++L+ Sbjct: 2 LDLQKLRMFVAAAQSRNFTRAAEQLDLTQPTVSQQIQTLERELGVSLFERLSRGIELTAA 61 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ ++ +R + ++R + + ++L+ LP ++ + P F Sbjct: 62 GRALLPHAEQMIALERIAEQAVRAAAGQSERTLLLGVGNTLATYALPDLLQRFNWEHPAF 121 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I + ++ + ++ G+ + ++ + ++L + + D+ L Sbjct: 122 VVHIGTGNTEQLLAQVISGEFELALVGSP--IVHTQLIIMPFLTTELVVIVSPDDPWARL 179 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + A +L S + ++ L V E +K+ G GI Sbjct: 180 KQINIEALHGRRMLLREEGSALQASVSELLNAQQIRPKQPI-VLGNLEAIKRSVEVGLGI 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELRE 297 A +P A+++E+ +G+L ++ + R + A+ F LR+ Sbjct: 239 ALVPAMAVRREVAAGRLRQIHLANVPTRRVYNVVHHRDRHITNAAQLFLDLLRK 292 >UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=Bacillaceae RepID=B7GI02_ANOFW Length = 304 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 113/296 (38%), Gaps = 10/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + +L+ F + K +F++A+ +Q + + +I+ LE+ V LF R ++L++ Sbjct: 8 MNLHYLHTFREVAKWNSFTKASEMLGYAQSSVTTQIKKLEEEFDVVLFERWGGKIKLTDA 67 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G ++ ++ L ++ A + I S++ LP + Sbjct: 68 GAELLEYANKIISLIDEAKQNLSEQTELA-GSLSIGTIESVAGFYLPPYLQAFKQKHSKV 126 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + V ++EG+ D DE + + I + + L V D L Sbjct: 127 NLLLQQNICNRLVKGVKEGKYDLAI-ILDEKREDPDLNVIVIKQEPLVLVAKPDHRLTRL 185 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L+ + +I L R+ + F E +K+ G GI Sbjct: 186 DKIDIHALGDEKLIVTEQGCSYREVIG-NLYRNYNIRFEYTIELGSIEAIKRCVAYGLGI 244 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELE 299 A+LP A++ E+ G+LV + E I + Y ++ ++ L + E Sbjct: 245 AFLPLMAVEAELEKGRLVRVPIPEAEIHLFLQLVYHRKKWLSQSLKQLINLLVDRE 300 >UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BX95_LISGR Length = 297 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 135/297 (45%), Gaps = 14/297 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + +QA+ + +V+Q A SR+I LE+ +G++LF+R +QL+ Sbjct: 1 MELRQLKYFMEVASFEHMTQASENLHVAQSAVSRQITKLEEELGIKLFDRVGRNMQLTTV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F +Q++ +L A + SD + ++I +SL+ +LP++IS P Sbjct: 61 GEDFLNQVKVAYNELLKAEAIVTEYSDPTKGSVRIGLPNSLASKVLPAVISAFRAEYPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCA-----SDE 182 T+ E L +G+ D F + + + ++ F+ +L + +D Sbjct: 121 TYHFVEGSNAELKQLLLDGEIDITF-LSPVPVTDDSVEAVKFFDEKLKVIFPATHPLADR 179 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + +L LA F + Y N + +++ T +S F S ++ + G Sbjct: 180 YNVSLEELAAEKF--ILYPPNFDLFKIVT-TAAEKKAISLDIAFQSQDFYTIQGLVGAGL 236 Query: 243 GIAWLPEYAIQQEI-RSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 GI+ LPE + I + K + L EL + +++P + F++ +++ Sbjct: 237 GISILPEMILDGTIFKDTKALPLRNKELRRSV-GLVVTKKRQLSPTEKLFYQFIKKF 292 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 138/296 (46%), Gaps = 13/296 (4%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 E + + FL + + NF++AA +VSQ A + +I+ LE+A+GV+LF+R + L++ G Sbjct: 4 ELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALTDAG 63 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFT 128 + + ++ ++ E+ ++ R + + + +A S++ G+L + +S+ P Sbjct: 64 REVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHPGIM 123 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALF 188 I + D+ ++K+++ + D + + + LF +LF + Sbjct: 124 IHIHDVVADQVIEKVKKEEVDFGVATVMH--ADKELTLMPLFTDRLFAFLPEQHPLSSRA 181 Query: 189 NLAQPH---FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 +++ +PL+ +R + + ++++ L H + + + + MS L + G GI Sbjct: 182 SVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTAL-SLVRAGFGIG 240 Query: 246 WLPEYAIQQEIRSGKLVVLN--RDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 LPE A + LV L R +L PI R +P ++ + LR++ Sbjct: 241 ILPEDA-GTMGSAQNLVALPIVRPQLTRPIHV-LMRKGRSASPAVQQMLQILRDIT 294 >UniRef50_A8H0Z4 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A8H0Z4_SHEPA Length = 302 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 122/295 (41%), Gaps = 19/295 (6%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 + F+ + + +FS AA ++ +Q S+++ ALE +G +L R L L+E G ++ Sbjct: 7 MKAFVRVVQTGSFSAAAREQSSTQATISKKVAALESLLGAKLLTRSSRELSLTEVGAVYF 66 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WAIEAI 134 ++ +L+ A++R + +++AA + I+ + + ++ + Sbjct: 67 ENCVAIIAELDEAQAQVRSQQASPKGILRVAAPVVFGCQFIAPILGEFLIRYPEIKVDLM 126 Query: 135 DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPH 194 D+ VD + EG + + L ++ LF++ L V + E L QP Sbjct: 127 LSDKHVDLVAEG---VDLAIRAKQLEDSSLVARHLFDNPLITVASP----EYLKRFTQPK 179 Query: 195 FPLLNYSRNSYMGRLIN----RTLTRHSE------LSFSTFFVSSMSELLKQVALDGCGI 244 P + N + ++ + + E + Q+ALDG GI Sbjct: 180 EPQELRAHNCIVYSMLKSVNIWHFEQAKGGGDKISVPVGGNCRCDNGEAILQLALDGVGI 239 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAER-FWRELREL 298 A LP + + + I GKL + + L P+ A +R P+ R F L++ Sbjct: 240 AQLPTWMVDKHINQGKLQRMMPNYLSHPLPFNAIYPQSRYVPLKVRCFIDYLKQC 294 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 117/289 (40%), Gaps = 10/289 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L ++ + + +F++AA +SQ A SR ++ LE+ +G L R+ + + Sbjct: 17 LNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTMA 76 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G I R + + L + ++ I A+ ++ + LLP ++ P Sbjct: 77 GTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTIGIYLLPPLLGNYHRRYPGI 136 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 ++ + + +++L Q D + + + + + S V AS +H Sbjct: 137 ELFLDIGNTQQIIERLLSYQIDVA--YVEGPVAANEDLQVVPWRSDEMVVIASPDHPLTR 194 Query: 186 --ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 L P + S +++ + L H+ ++ +E +KQ G G Sbjct: 195 RVTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHN-VTVRPVMELGSTEAVKQAVSAGLG 253 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 ++ + + IQ E+ +GKL VLN L I Q R++ R +A W Sbjct: 254 LSMVSRFTIQSELIAGKLRVLNIPGLNIQRQLSRVRLHDRPQSLALEAW 302 >UniRef50_D2M0Y8 Transcriptional regulator, LysR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M0Y8_BACS4 Length = 296 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 120/300 (40%), Gaps = 23/300 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E L F + NFS+AA VSQPA SR+I ALE+ G+ LF R ++L+ Sbjct: 1 MELHQLRSFYYVATYLNFSRAAEKLLVSQPAVSRQIEALERLYGLPLFYRSKKKVELTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ + + ++ E L + ++ + ++ + +++ P Sbjct: 61 GRELLTYAKKMMTLAEDAKEALLTLKNGDSGELHVGCGTTIGNFAITALVVHFQKKYPNI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---- 183 ++ + D ++KL E + D +D+ F+ LF+ + VC ++E Sbjct: 121 HIHLDIDNTDTIINKLNERKLDVAI--IAKDVDREAFNVDSLFQDNIHLVCLAEEMQKYK 178 Query: 184 -GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 ++L L + + R S+ ++ + + +E +KQ + Sbjct: 179 QSQSLDQLENETY--ILRKRGSHTRECVDEYF-KTMNFQPQNIIEVNNNEAIKQAVIQKL 235 Query: 243 GIAWLPEYA--IQQE---IRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 G+ +L I++E +R +L ++ E + Y + V E F L++ Sbjct: 236 GVGFLSSITYKIEREHQILRQIRLQKPSKREFS-----FIYPKGKYYSTVMEMFHTFLKD 290 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 118/293 (40%), Gaps = 15/293 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + + + ++AA +++QPA S++I LE+ +G+ LF+R L+L+E Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 G+ R +L Q+E A + ++ I A ++ LLP ++ Q P Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDC---IFSFHDEDLLEAPF--DHIRLFESQLFPVCASDE 182 T + + +D L G +D DE L P + + L S P+ E Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVALPVTDEQLTVTPLLNEPLVLIVSTTHPLARRSE 180 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + L + L S +SY R R + + T +E L + G Sbjct: 181 --VMMTELRHERWIL---SPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAAGL 235 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G++ +P A+ +L V D+ + +R + +P A L Sbjct: 236 GVSLVPALAVAGCTDVVRLTV--SDQHLTRSLGLVWRSDRTASPAARALREFL 286 >UniRef50_B0P1N2 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1N2_9CLOT Length = 296 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 125/297 (42%), Gaps = 17/297 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + LY F + + +++ QAA N+SQP+ SR I LE+ +GV LF + ++L++ Sbjct: 1 MNLNQLYYFQKVAQLQHYHQAAKELNISQPSLSRSIANLEEELGVSLFQKNGRNIELTKY 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM-----PP 125 G IF + ++ +++ +++ + + I I L+ +P ++ Sbjct: 61 GSIFLEHVNRIIDEIKIAENKMKSLAGSSSGHIDIGYVFPLAKSYIPRLVRSFLNQQENH 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG- 184 T+++ + L+ + D +F D E F + +Q + EH Sbjct: 121 EITFSLSQEITKNLIADLKNEKYDVVFGSLVADEPEVEFVPV---VNQEMVIITPPEHPL 177 Query: 185 ---EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 + L +P++ Y + S +GR N ++ + + + S F SS + + + Sbjct: 178 KYKKKLVLEDLLDYPVIGYDKTSGLGRFTN-SIYKQNHIKPSIAFESSDENAIASLVAED 236 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELRE 297 GI ++ + +++ + +L+ + Y AY N M P +F +E Sbjct: 237 FGIGFVAHV---ESLQAYDVEILHLSNVKPYHTVYMAYLKNMPMIPAVRKFIEFTKE 290 >UniRef50_A3YG12 Putative transcription regulator protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YG12_9GAMM Length = 299 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 10/290 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 E + + F + + ++FS+AA V++ A S++I LE+ +GV L NR L L+E G Sbjct: 3 ELRRIGVFTRVVETKSFSEAARQLGVAKSAVSKQIVQLEKEVGVRLLNRTTRSLSLTEAG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WA 130 +IF+ ++ + + L+EL+ + ++I+ S L +I ++ L+ Sbjct: 63 EIFYRHSAEIVNRTKIALSELKEYQNQPTGTLRISCPVSFGTEHLIPVIKEVRALYPLLK 122 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH----GEA 186 I+ + D ++ + EG D L+ +L V AS E+ G Sbjct: 123 IDLLLEDRIINMVEEG-VDLAIRI---GWLQESNLVAKLVCETPVSVFASPEYLAQKGTP 178 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 ++ S S + + + S+ + ++ G GI+ Sbjct: 179 KTPQDLQKHDWISLSLFSSPLTWEFEKKGQKQSVQMHSQLKSNSVAAVIALSKSGQGISA 238 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWREL 295 L ++ +Q + G L L D + P YA Y + P F L Sbjct: 239 LTKFCLQNDFEKGLLQPLLTDYKLKPSGIYAVYPHREHVPPKVRIFIDFL 288 >UniRef50_B9ITM1 Transcriptional regulator, LysR family n=71 Tax=Bacillus RepID=B9ITM1_BACCQ Length = 297 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 115/295 (38%), Gaps = 9/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L F NF+Q A N +Q + + +I+ LE +G LF R L L+E Sbjct: 1 MEIKQLITFKIAADTLNFTQTAKKLNFAQSSVTAQIKTLEAELGTPLFERLGKRLFLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ F ++ ++ + + I A S LPSI+ + P Sbjct: 61 GRKFQLYADKIIVLSNEAKTAVKD-DEEIAGTLTIGAQESQCTYRLPSILKRFKAQFPQI 119 Query: 128 TWAIEAIDVD-EAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG-- 184 + + +A ++L EG+ D F DE E L + +L V A H Sbjct: 120 KLIFKPAHSNKDAKEQLMEGKVDLAF-ILDECKTEDALHVEPLMKEELKVVAAPGHHLLQ 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + ++ L + R + L R ++ + E +KQ + GI Sbjct: 179 QTSVSIKDLETETLLLTELGCSYRTLFEELFRIQDVYPANKIEFVSVEAIKQCVIADLGI 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWRELREL 298 A LP ++++IR G + L+ + + PI A+ + M ++F RE Sbjct: 239 AVLPAIVVEKDIREGTIKELHLENTINPIFTQIAWHKDKWMTVPLQQFIDVTREF 293 >UniRef50_C0BY92 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=C0BY92_9CLOT Length = 311 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 123/313 (39%), Gaps = 27/313 (8%) Query: 3 DCGAILHN------IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVE 56 DCG I+ N + L+ F+TL +++ AA +++QP+ S I +LE+ +G Sbjct: 2 DCGMIVKNRQRRQIMNLNQLHYFVTLAHMEHYTNAAQKLSITQPSLSHAISSLEEELGTS 61 Query: 57 LFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLL 116 LF RQ + L++ G++F L L++ + + R + K+ I ++ + Sbjct: 62 LFERQGRNVALTKYGRLFMEYAEEALDILDAGIKKTRAMTSERSGKVDIGYIYTQGSEFI 121 Query: 117 PSIISQMPP-----LFTWAIEAIDVDEAVDKLREGQSDCIFS---FHDEDLLEAPFDHIR 168 P +IS + E V+ ++E + D F +++L P + Sbjct: 122 PEVISGFLEANRDKKVEFGFSNGVTKEIVEGVKEEKYDIGFCSMVTGEKELDFVPVSQEK 181 Query: 169 LFESQLFPVCASDEHGEALFN----LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFST 224 L EH A +P + ++R S + +I++ + + Sbjct: 182 LIA------AVPPEHPLAEKKSVRFEEIASYPQIFFNRGSGLRGVISQIF-KDYGIKPDI 234 Query: 225 FFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM 284 + + + G G+ +P+ A + +++ L + + D N Sbjct: 235 VYTVDEDSAMVGLVARGFGVGIVPDAATVRSMKASFLEIEDLDY--RRFIYMVTLKNKYQ 292 Query: 285 NPVAERFWRELRE 297 PVA+ F +++ Sbjct: 293 VPVAKAFTEYVKD 305 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 120/295 (40%), Gaps = 15/295 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L FL + + ++F++A+ S VSQP S+ I+ LE+ +G+ELF R ++L++ Sbjct: 1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVELTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G + Q + +++ ++ +EL + + ++I + G P ++ P Sbjct: 61 GHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENYPNV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 T+ + + + + +G D + E F + + L V Sbjct: 121 TFQLVEDGSIKVQEGVGDGSLDIGVVVLPAN--EDIFHSFTIVKETLMLVVHPSHRLADE 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFST--FFVSSMSELLKQVALDGC 242 P + + + L NR +T + F + +S + + ++ Sbjct: 179 KECQLRELKDEPFIFFRED---FVLHNRIMTECIKAGFRPHIIYETSQWDFISEMVSANL 235 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRELR 296 GI LPE + + K+ V+ + VIP A +R + ++ A + + Sbjct: 236 GIGLLPERICRG-LDPEKVKVIPLVDPVIPWHLAIIWRKDRYLSFAARAWLEHTK 289 >UniRef50_C6QF64 Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF64_9RHIZ Length = 305 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 121/291 (41%), Gaps = 9/291 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + + F + ++++AA N+++ A S+ + LEQA+G L +R + +E Sbjct: 1 MDKLEAMNAFAKVVASGSYAEAARRLNLTRSAVSKAVMELEQALGARLLDRTTRRVTPTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 G ++ + +L Q++ A++ D + +K+ A S L ++ ++ Sbjct: 61 AGLAYYERCLAILAQVDETEAQISRLHDEPKGVLKVNAPMSFGTLYLGDAVADFMIRYSD 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 +E D +D L EG + ++++ R+ +++ V + D HG Sbjct: 121 LKVELTLTDRFIDPLEEG---VDVTVRIGAMVDSSLIARRISPARIVLVASPDYLKAHGT 177 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 L+Y + M R + ++ S+ ++L++ AL G GIA Sbjct: 178 PQSPSDLAEHRCLSYGHMTSMQRWHLTDKGKPVSVAIGACLSSNNGDVLREAALKGIGIA 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWREL 295 LP + ++I + +L ++ + + +A Y N + F L Sbjct: 238 LLPTFIAGKDIAAKRLQIVLPENQPDDLTIHALYAPNRYLAAKTRVFIDFL 288 >UniRef50_Q7W3G8 LysR family regulatory protein n=2 Tax=Bordetella RepID=Q7W3G8_BORPA Length = 330 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 88/308 (28%), Positives = 153/308 (49%), Gaps = 16/308 (5%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 H ++ W+ DFLTL FS+AA RNV+QPAFSRRI+ LE +G+EL +R+ L+L+ Sbjct: 11 HAMKQLWIEDFLTLVDAGTFSRAAALRNVTQPAFSRRIQQLEGWLGLELIDRRSPTLRLT 70 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII----SQMP 124 + R LL+ + ++ + ++ +A HSL++ LP+++ Q Sbjct: 71 PVAQRHIPGFRMLLRDMAQLRTRMQSEQNGLA-RLVLATQHSLTMSRLPALLTLLGEQDS 129 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDED--LLEAPFDHIRL--FESQLFPVCAS 180 P +++ + + D+ V G++D + + + L H+RL + L P+ A Sbjct: 130 PRIEFSVRSENRDDCVALFLRGEADLLLCMEERNDALYRLVPAHLRLPVGQEVLVPLSAP 189 Query: 181 DEHGEALFNLAQ-PHFPLLNYSRNSYMGRLI-NRTLTRHSEL-SFSTFFVSSMSELLKQV 237 +G AL + LL + +S++GR++ ++ T + S +K++ Sbjct: 190 ARNGRALHAPRRGKPLSLLAFPPDSFLGRVMYEQSFTALLQHCKVEIVHESVFLAGVKEM 249 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDE---LVIPIQAYAYRMNTRMNPVA-ERFWR 293 L G G+AWLP I++E+++G LV+L+ E + +Q YR P A +R W Sbjct: 250 VLAGLGMAWLPLSLIEREVKAGALVMLDAREEYLQPVTLQLGLYRNTHSNYPEAIDRLWT 309 Query: 294 ELRELEIV 301 LRE E Sbjct: 310 LLRESEAP 317 >UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GE5_BURXL Length = 303 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 123/291 (42%), Gaps = 10/291 (3%) Query: 18 DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQ 77 FL + + +F +AA + SQ A S R+ LE +GV LF+R + L+ +G Sbjct: 12 TFLAVAETLSFRRAAEHTHTSQSAVSARVSQLEDRLGVRLFHRTTRQVTLTAEGLQLFVV 71 Query: 78 IRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTWAIEAI 134 R ++ +E LR + ++ IAA S+ +LP+I+ + P T + + Sbjct: 72 ARTAVEDMERVAESLRKKAALQSGELTIAAVPSIGQTVLPTIMGEFHRRYPGVTLKLLDV 131 Query: 135 DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQ-- 192 D ++ + G D ED + F+ LF + F V +++ Sbjct: 132 DSQRCIEMMEAGSVDLAIVSDLEDRHDIVFE--PLFRDECFLVVPRTHALGERRSISLRE 189 Query: 193 -PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYA 251 FPL+ R + + ++I R + +MS L++ + +G G+ +PE Sbjct: 190 AASFPLMASPRGTTLWQIIERAFAACGATPVAHQETWNMSTLVR-LVEEGFGMGIVPEIC 248 Query: 252 IQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVL 302 + + + + VL+ +E V + A N +P ++ F + L E L Sbjct: 249 LGK-LDVSRCTVLSLEEHVGRMIGVARMTNRSESPGSKAFRQLLGERTPPL 298 >UniRef50_C8WRL7 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL7_ALIAD Length = 303 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 120/291 (41%), Gaps = 9/291 (3%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 + L +T+ + S+AA + +V+QP +R+I+ LE+ G LF+R L L+ G+ Sbjct: 2 FEALRALVTVVSLGSVSEAARALHVTQPTVTRQIQQLERHFGQALFDRSGKRLALTPAGE 61 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFTW 129 H+ +L++ E L S+ +++ A S +L LP+++++ P + Sbjct: 62 RVHAYALEVLRKQEELAESLLEMSNPEAGLVRMGAGLSPTLYRLPAMVARYASMHPRVRF 121 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS--DEHGEAL 187 + +++L D + EA + + L+ +L V S G+ Sbjct: 122 QVVTGSSKVTLERLASRVVDLAIVTTPPE-DEAGVEQVALWRDELVAVAPSYHALAGKRA 180 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMSELLKQVALDGCGIAW 246 + +PL+ S + R I+ L R E + E + + G G+A Sbjct: 181 TIVELAQYPLVVMHGESGLRRQIDDLLHRAGVERPAPPVMETDSLEAMNRFVQAGLGLAV 240 Query: 247 LPEYAIQQEIRSGK--LVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 +P A+ ++ G+ LV + +L +R + + A F L Sbjct: 241 VPWPAVADDVTQGRLKLVHIVGCDLGQRTVTLVWRKESHIPAAARAFIEWL 291 >UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX23_9PROT Length = 303 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 127/299 (42%), Gaps = 15/299 (5%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 + L F + + +F++AA + +++QPA S +++ LE+ +G LF + + L+ GK Sbjct: 6 LQQLRLFEAVARFGSFTRAAEAIHLTQPAISIQVKRLEETLGAPLFEQMGKKIYLTAAGK 65 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFTW 129 ++ RH+ L + +L + +AA + + LP + P Sbjct: 66 ELYATCRHVFDSLGTFEGKLDELRGEVAGPLNLAAVTT-AKYFLPHYLGAFLRRYPKVLP 124 Query: 130 AIEAIDVDEAVDKLREGQSDC-IFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALF 188 ++ + +++ + D I + E + + + +L V A +H A Sbjct: 125 QLKVSNRARITERMEANEDDIYILATLPERID---IEVHPFLKDELV-VFAHPKHPLANK 180 Query: 189 NLAQPHFPL----LNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 P L ++ S + R L ++ + E +KQ + G GI Sbjct: 181 KKIPPELLLGERIISREAGSGIRMTFERLLAERG-VTLEPYMELGSGEAIKQAVMSGIGI 239 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELRELEIVL 302 A L ++++ E+ +G+LVVL+ + + I YA +R + P A +F L+ +I + Sbjct: 240 ATLSTFSLKLELETGRLVVLDVEGMPIRRNWYAVHRRGKHLTPSALKFIEFLQTADISV 298 >UniRef50_C3BMM7 Putative uncharacterized protein n=3 Tax=Bacillus RepID=C3BMM7_9BACI Length = 298 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 71/293 (24%), Positives = 115/293 (39%), Gaps = 9/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L F T + NF+Q A N +Q + + +I+ALE +G LF R L L+E Sbjct: 3 LEIKQLITFKTAAENLNFTQTAKKLNFAQSSVTAQIKALETELGTPLFERLGKRLFLTEA 62 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ F ++ L+G + + I A S LPSI+ + P Sbjct: 63 GRKFQLYADKMIALSHEAKMALKG-DEEISGTLVIGAQESQCTYRLPSILKEFKTQFPQI 121 Query: 128 TWAIEAIDVDEAV-DKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 + +E V +KL EG+ D F DE E L +L V + Sbjct: 122 KLIFKPAHSNEDVKEKLMEGKLDLAF-ILDECKAEDALHVESLVREKLKIVVFPNHPLLE 180 Query: 187 LFNLAQPHF--PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ F L + R I L R ++ E +KQ + G GI Sbjct: 181 KSIISTKDFESETLLLTELGCSYRTIFEELFRAEDVYPVNKIEFVSVEAIKQCVIAGLGI 240 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWRELR 296 A LP ++++I+ G + L + + PI A+ + + ++F R Sbjct: 241 AILPAMVVEKDIQQGTMKELVLENTISPIFTQIAWHKDKWITAPLQQFIEVTR 293 >UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS6_DESAS Length = 300 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 117/301 (38%), Gaps = 17/301 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + +L F+T+ + + S+AA + N++QPA S++I +LE G++L R + +E Sbjct: 1 MNFNFLQTFVTVIEFNSISKAAKALNITQPAVSKQIASLEDHFGIKLLERLGRKMVPTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 G + + +L L+ E+ + + I A+ +LP II + P Sbjct: 61 GNRLNRHAKIILNSLQQAEKEINEMISEVRGNLVIGASTIPGQYILPKIIGLFKKQYPQV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +E D + ++KL E + +L I+L + +L + + Sbjct: 121 KTVLEISDSGKVIEKLLEHEIHLG--AIGTKVLHDKIASIKLSDDELVLITPLEHPFATR 178 Query: 188 F-----NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFF---VSSMSELLKQVAL 239 LA +S + LT L+ + +E + Sbjct: 179 KTVKAVELAGEQMVW--RESDSGTRHAVEEKLTAKG-LNVNNLIITAEFGSTESIIGAVE 235 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWRELREL 298 G GI+++ +A+ + + VL +++V+ Y + N AE F L +L Sbjct: 236 AGMGISFVSHWAVPENEYRRNIAVLRLEDIVLDRNLYIIYPKRKYFNRTAETFINFLHQL 295 Query: 299 E 299 + Sbjct: 296 D 296 >UniRef50_C7RAV2 Transcriptional regulator, LysR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAV2_KANKD Length = 288 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 121/292 (41%), Gaps = 11/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T L FL++ +F+ AA ++QPA S+RI+ LE +G LF+R + +E Sbjct: 1 MDTDLLRTFLSVASIGSFTLAAKKLQLTQPALSKRIKRLETIVGTNLFDRVGNHVIETEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ Q +L +++ ++R + ++ I +H + L LLP + Q P Sbjct: 61 GRLLREQAPAILGSIDNTFQDIRDLTGRVSGQLHIGTSHYIGLHLLPDYLEQYIDTYPEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I+ ID + A D++ G + +H +++ L VC D A Sbjct: 121 DLNIDFIDSELAYDRVLSGDLELALLTFPSQ-ANPRLEHQLIWQEALQMVCHQDYELLAH 179 Query: 188 FNL--AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 N ++P + +++ L L + ++ E++ ++ G Sbjct: 180 DNPMNQLSNYPCILPPAHTFPRELFEHQL-ETLGVHLGKVKTANYLEVIAKLVACKMGWT 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 LPE + + + ++ + +L + YR N ++ A+ L + Sbjct: 239 LLPERLVSEPLT----LIGDSRQLSVRSMGIIYRTNKTLSNAAQALVDLLHQ 286 >UniRef50_C6WQ50 Transcriptional regulator, LysR family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WQ50_ACTMD Length = 302 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 111/294 (37%), Gaps = 8/294 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ET+ L F T+ + +F++AA + N SQP + RI+ALE+ +GV LF R +Q++ Sbjct: 1 METRQLLAFTTVVQTGSFTKAAATLNCSQPTITTRIKALEETLGVALFRRLPRGIQMTSA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G R+++ + + + + I +A SL+ L +I M P Sbjct: 61 GVELLPFARNIITLTDKARKAI-TMNGEPHGHLVIGSAQSLTDYRLLPLIEYMCWRYPSV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + + +REG+ DC F F + L L V Sbjct: 120 QISLHSRTTRSNLAAVREGRLDCAF-FIGPVEQRDGLETTVLCPEPLVMVAGPGHALARS 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + L+ + R L H S S + K+ G GI Sbjct: 179 GAVTEADLRGSTLVRAENGASYHEQFERALGLHEAESRSPVLALDSVDAAKRAVASGLGI 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 + +PE + E+ G+L + +A+R + NP ++ Sbjct: 239 SLVPEVTVAAELADGRLSRIGWTPPFRVFTQFAWRQDNSANPSVTALVSAAAQV 292 >UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2L1_PELTS Length = 303 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 108/279 (38%), Gaps = 10/279 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L FL + + ++F++AA +SQPA S +I+ALE+ + V LF R + L+E Sbjct: 1 MNLKQLEAFLLVAELQSFTKAARQLYMSQPAVSFQIKALEEDLQVALFQRGDKKVILTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + + + +L+ + L D + + + A+ LLP +I + P Sbjct: 61 GRLLYPEAKQMLKHYQKIKVGLDDLRDLKKGHLVVGASTIPGEYLLPLLIGKFKEKYPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + +RE + D + + + + QL + +L Sbjct: 121 KITLKVSGSGQVGQWVREREIDLGIT--GAFIEGESLECRPWIDDQLVLIVNPSHRWASL 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 + P++ +S R I + L + + + G Sbjct: 179 GAVQASELKNEPMIMREHDSGTRRTIEKKLKECNLSLEKIPQGMELGSTRAVITAVEAGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN 281 G++ + YA ++ + G++ + L + Y R Sbjct: 239 GVSIVSRYAAREALELGRVKEVQVTGLNMNRSLYQVRHK 277 >UniRef50_Q62XD4 Transcriptional regulator CitR n=3 Tax=Bacillus RepID=Q62XD4_BACLD Length = 292 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 135/297 (45%), Gaps = 14/297 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ KWL+ F+T K NF + A + +SQP + +I+ LE+ +G +LF R+ + L+++ Sbjct: 1 MDFKWLHTFVTAAKYENFRKTAETLFISQPTVTVQIKLLEEELGCQLFTRKGRSIHLTKE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ + LL+ ES++AEL + + +A + ++ +LP ++ + P Sbjct: 61 GRAYLPFALRLLEDYESSMAELHRIRQGYSQTLNLAVSPLIADTILPFVLKKYTALHPNS 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVC-----ASDE 182 ++ + E + G +D S ++ + + ++ + V A+++ Sbjct: 121 EIKVKIAESAEIAPLISAGHADIGLSCL--NVQSSNLNCYSMYSDPVILVAPHDGRAAEQ 178 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + LL ++ Y L+ + + F + S + + K+ +G Sbjct: 179 APPLDVEDLLEEYLLLTHNHPEYWDDLVRQLRIK---FPFVRTMLVSQAHITKRFISEGL 235 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 GI++LP +++E+ G+L+ + D + +P+ Y ++ + N E F L E Sbjct: 236 GISFLPLSTVRRELMEGRLIEVPCDFMKLPVAGG-YAISLKDNEKVEHFLAFLAEFR 291 >UniRef50_P30864 Uncharacterized HTH-type transcriptional regulator yafC n=94 Tax=Bacteria RepID=YAFC_ECOLI Length = 304 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 12/289 (4%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F+++ + +FS+AA + A SR ++ LE +GV L NR L L+E+G+ + Sbjct: 8 LAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEGERYF 67 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAID 135 +++ +LQ++ + +E+ + + ++I AA + L L +I + ++ Sbjct: 68 RRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERYPEVTLSLV 127 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGEALFNLAQ 192 E + L E + D L ++ LF S + + D +G+ Sbjct: 128 SSETIINLIERKVDVAI--RAGTLTDSSLRARPLFNSYRKIIASPDYISRYGKPETIDDL 185 Query: 193 PHFPLLNYSRNSYMGRL-INRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYA 251 L ++ + + I R+ + E+ + S+ E LKQ+ L G GIA L +Y Sbjct: 186 KQHICLGFTEPASLNTWPIARSDGQLHEVKYG--LSSNSGETLKQLCLSGNGIACLSDYM 243 Query: 252 IQQEIRSGKLVVLNRDELVIPIQA---YAYRMNTRMNPVAERFWRELRE 297 I +EI G+LV L D V+P++ Y + ++ F L E Sbjct: 244 IDKEIARGELVELMAD-KVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSE 291 >UniRef50_B9K5H2 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K5H2_AGRVS Length = 296 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 115/281 (40%), Gaps = 6/281 (2%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F + + R+F++A + +S+PA S+ IR LE +GV L NR + SE G ++ Sbjct: 7 LKVFCAVIEARSFTKAGNNIGLSRPAISKNIRELEAHVGVTLVNRTTRGVMPSEAGSRYY 66 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAID 135 + LL + E + +++ +L L L+ ++ Q + Sbjct: 67 QIVSELLWRHEQADEVASQSGAELRGTLRVTMPVTLGLHLILPVLPQFNEENPECSLDLC 126 Query: 136 VDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQP-- 193 + E +L EG D + L ++ R S + +CA+ + + +L P Sbjct: 127 LSEEKQQLVEGNFDVAVR-ASQRLEDSTLMS-RCIGSVTYAICAAPSYVQKSQSLKSPKD 184 Query: 194 --HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYA 251 L+ + N + +S S+ SE +K + + G GIA +P Sbjct: 185 LEDHQLVVHGANIGDQKWRFSAQGESCYVSVRAQHKSNCSEAIKSLTVAGMGIARIPRPY 244 Query: 252 IQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFW 292 + +E+ G+LV L D + P+ YA + P R + Sbjct: 245 VSRELAEGRLVELLSDWTMEPLTIYAMYPQSNFLPRRTRLF 285 >UniRef50_Q06610 RuBisCO operon transcriptional regulator n=4 Tax=Proteobacteria RepID=RBCR_THIFE Length = 309 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 113/298 (37%), Gaps = 13/298 (4%) Query: 6 AILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPL 65 + + L F + + +F++AA +++ PA S ++R L +A+G LF++ + Sbjct: 1 MSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFDQIGKKI 60 Query: 66 QLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM-- 123 L+ G+ S +L +LE E+ + +K+A + + +P ++ Sbjct: 61 YLTAAGEALTSACHDILDRLEYFTQEIAALQGLEKGSLKVATLST-TKYFIPRMLGGFCT 119 Query: 124 -PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE 182 P + + + +++L Q D + + + F V A + Sbjct: 120 EHPGVATVLFIGNREVLLERLARNQDDLYILGQPPEHMNVVAEA---FADNPLVVVARLD 176 Query: 183 HGEALFNLAQP----HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 H +P P + S + +H + T +E +KQ Sbjct: 177 HPLTQEKDIEPSRLRDVPFILREPGSGTRLAAEKFFEQHGVI-LKTRMEFGSNEAVKQSV 235 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 G GI L I+ E+ SGKL +L+ + + YA R++P + F L Sbjct: 236 AGGLGITVLSASTIRAELASGKLAILDVRGFPLERKWYAVYPAGKRISPRTKAFMEYL 293 >UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QF45_CATAD Length = 307 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 114/303 (37%), Gaps = 15/303 (4%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + + L FLT+ + FS AA +SQP+ S +R LEQ++ L +R ++ Sbjct: 1 MTQLNLHRLSIFLTVVETGGFSAAAQKLYMSQPSVSNHVRNLEQSLQTTLIDRSGPRIRP 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 + +G++ R + E +A +R S ++++ ++ LLP ++++ Sbjct: 61 TAEGEVLAEYARRIFLLTEEAVAAIREVSGVQSGRLEVGGTTTVGTYLLPRLLARFRERH 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 I + + + +L +G+ + + + +L V A Sbjct: 121 QNIECDIVVGNNGQILKRLLDGE--LGLAIVAGQPAAPQLKTETVLDERLLLVAAPGHPL 178 Query: 185 -EALFNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMS--ELLKQVA 238 ++ P L S L L + M E +KQ Sbjct: 179 THPTPHITAPQLAGERFLLREPGSQTRDLQEAALINW---DLDDMPKADMWGPETIKQSV 235 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRELRE 297 G GI+ + E+AI E++ G+L VL D + AYR + ++P F R Sbjct: 236 AAGLGISLISEHAIDTEVKDGRLAVLEVDPPLRSRPVVIAYRRDRLLSPAERAFVALARG 295 Query: 298 LEI 300 L Sbjct: 296 LRT 298 >UniRef50_B8FZV1 Transcriptional regulator, LysR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZV1_DESHD Length = 301 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 121/293 (41%), Gaps = 16/293 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + + F+++ + RNFS+A + ++QP S I LE + V+LF+R + + Sbjct: 1 MDFRQIEAFVSVYRLRNFSRAGKALFLTQPTISSHISDLETELEVKLFDRSSREVMPTGA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 G IF+ +LL+ + ++ L + + +++IAA+ LLP ++ ++ P Sbjct: 61 GDIFYQYAVNLLETRDCAISSLNQHNRQIEGRLEIAASTIPCQYLLPKLMIGFQKINPNI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 + I D ++ + K+RE + D E D+ L + +L + A D Sbjct: 121 RFLIHQGDTNQVIKKVREKKYQVGIVGTRTD--EDKLDYEILTKDRLVLIAARDYIEAAD 178 Query: 186 ----ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVAL 239 A+ +L + F + R S L + +E +K Sbjct: 179 SPCIAVESLLKKQF--ILRERGSGTRDTFETALKEKGIDPDTLKVVAEMNNTEAIKHAVS 236 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERF 291 +G G+A + ++ E++S + D L + Y N ++P F Sbjct: 237 EGLGVAVVSSLSVGNELKSEAFQAFSIDGLELERSFYLVTYRNQPLSPSVAAF 289 >UniRef50_A0NTX9 LysR family transcriptional regulatory protein n=3 Tax=Proteobacteria RepID=A0NTX9_9RHOB Length = 342 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 111/288 (38%), Gaps = 7/288 (2%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 L F+ K +FS AA +SQPA S+++RALE +G+ L NR L L+E G+ Sbjct: 19 LSSLSGFVQAVKFGSFSAAAKHLGISQPAVSQQVRALEDELGIRLLNRTTRQLSLTEAGE 78 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIE 132 +++ R +L++L ++ + + + +L + + + Sbjct: 79 RYYAYARDILERLAEADRSVQSEEAQMSGPLSVGLPLGFAETVLSDFLIRFKLDHPGILL 138 Query: 133 AIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEALFN 189 + + + + + + D D + + RL +Q V + D+ G Sbjct: 139 DVSLSDQFVDVIQQRLDVAIRMGD--IEDDRLIVRRLGLAQRCLVASPDYLDKRGRPAHP 196 Query: 190 LAQPHFPLLNY-SRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLP 248 L Y + ++ + + S + + S L++ A+ G GIA Sbjct: 197 DDLKDHDYLLYKNISTGTRVPFISPVGEKLSVKISPTMLVNNSSTLRRAAMAGLGIALSN 256 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWREL 295 + I +R+G L V+ P +A + R P+ RF L Sbjct: 257 RWLIDPFLRTGDLEVVLPQWQYPPHPVHAVYPSNRFIPLKVRRFVDSL 304 >UniRef50_Q2BJY7 Putative transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJY7_9GAMM Length = 301 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 124/296 (41%), Gaps = 11/296 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 ++N++ L F + K ++F A R V+ S+ I LE+ +GV+L R L L Sbjct: 1 MNNLDDMLL--FAQVVKLKSFRAVAEQRGVASSVVSKHISRLEKHLGVQLLIRTTRKLNL 58 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 +E G+ F + L + + ++ Q ++IAA LP++I + L+ Sbjct: 59 TEAGREFFRHCQQLESSVALAERAVSQHAEQPQGLLRIAAPMISGQYFLPAVIDEYLRLY 118 Query: 128 T-WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE---H 183 +E I D D + G + L ++ RL ES+ + + D H Sbjct: 119 PDMRVEMIIKDSFQDLVSSG---FDLAIRTGTLSDSSLRARRLVESRWYAYASPDYLQTH 175 Query: 184 GEALFNLAQPHFPLLNYS-RNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 G L +S + + T + ++ F +S L++ ++ G Sbjct: 176 GTPSAIDDLALHNCLQFSYQETGPHEWPVTTGGKPGKVKVQGRFEASSLVTLREASVSGM 235 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWRELRE 297 GIA++P Y ++++++ G+LV + +D + + YA N R P F L + Sbjct: 236 GIAFMPVYLVREQVKQGQLVAVLQDHIYRDVGIYAIYPNIRYVPRKISAFIDILSD 291 >UniRef50_P73778 Transcriptional regulator n=5 Tax=Cyanobacteria RepID=P73778_SYNY3 Length = 302 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 118/291 (40%), Gaps = 15/291 (5%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 + F+ + +FS AA + +QP S++I ALE+ +GV L R T L L+E+GK ++ Sbjct: 7 MQSFVRAIEMNSFSAAAREQQTTQPTISKQIAALEKYLGVRLITRSTTKLNLTEEGKQYY 66 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLS----LGLLPSIISQMPPLFTWAI 131 + +L+ + A L G + A +++ + + L I++ P I Sbjct: 67 QYCQQILETVAEAEASL-EGKEKAVGTLRLGCSVLFGEMQIVPRLSLFIARYP---QVKI 122 Query: 132 EAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEALF 188 + + D VD ++EG D + + R+ ++ V ++ ++ GE Sbjct: 123 DLMMADYFVDMVQEG-LDLAIRIGNHQ--DKALISERIGITRRVTVASTSYFEKSGEPKT 179 Query: 189 NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLP 248 + Y+ S + ++ F ++ S ++ L GIA P Sbjct: 180 PEELTRHNCIVYTSLSTINEWHFHGKNGVIAINVKGSFQTNSSVAVRAAVLSDLGIAIAP 239 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELREL 298 + +I G L V+ +D +P YA +R P F LRE Sbjct: 240 IWMFGDDIYQGNLKVVLQDYQPVPFPIYAVYRRSRFYPAKVHCFIDFLREE 290 >UniRef50_A8RJM4 Putative uncharacterized protein n=3 Tax=Clostridium RepID=A8RJM4_9CLOT Length = 304 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 60/290 (20%), Positives = 123/290 (42%), Gaps = 10/290 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+T+ + +FS+AA +Q A + +IR LE +GV+LF+R + L+ Sbjct: 1 MELRQLQTFVTITQTESFSRAAEVLGYTQSALTVQIRLLENELGVKLFDRMGKRVYLTAP 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F +++ ++ E + + + SL LP I++ P Sbjct: 61 GRQFLGHANQIIRDIKCAR-EFAKSEEELCSPLHVGTLESLCFSKLPQILNSFRSSHPRV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD--EHGE 185 + A ++ +D + Q D I+ D ++ + + V + G Sbjct: 120 PVKVTASTPNQLIDMMERNQLDLIY-ILDRPRYNDNWNKVMEVREPIVFVASPSCGLGGN 178 Query: 186 ALFNLAQP-HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + +L + P +N R ++ L + + F S +E + ++ GI Sbjct: 179 RVISLEEIMDEPFFLTEKNENYRRELDCFLESQGMV-LTPFLEISNTEFIIRMIRKNRGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWR 293 ++LP +A+Q+ ++ G+L VL+ + + + Q Y N + + F R Sbjct: 238 SYLPLFAVQEYVKRGELAVLDVADFRLAMYQQVIYNRNKWLTKEMDAFIR 287 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 112/295 (37%), Gaps = 11/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F + + +F++AA + ++QP S +RALE+ +G +L +R + + Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GKI + R ++Q + + L + I A+ +LP +I P Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D E V + +G + L + F +L D Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGV--IGARLEDRRIVLEEAFSDELVLAVFRDHPWAVR 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 +++ P + R S ++N+ L H + +E ++Q G Sbjct: 179 KSVSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAIRQGIKAGI 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWRELR 296 GI+ L A+ +++R G L + + + R N +M+P+ F LR Sbjct: 239 GISILSHRAVAEDLRHGSLFAVPLAGIRFSRPFFLVQRKNRQMSPLCSAFLNHLR 293 >UniRef50_C1TQZ9 Transcriptional regulator, COG0583 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQZ9_9BACT Length = 299 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 120/285 (42%), Gaps = 19/285 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F TL + +F++ A +SQP+ S+ I LE+ V LFNR+ L L+ + Sbjct: 1 MSLHQLRTFCTLVEEGSFTRTAERLYLSQPSVSQHIATLEKEYDVILFNRRGRSLSLTPE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G ++ +LQ+ +S + R K+++ + + +LPS+++ P Sbjct: 61 GNALYTLALDVLQRSDSIPGKFREMQAMRYGKLELGVSTYVGTMVLPSLVAAFRNEHPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIF------SFHDEDLLEAPFDHIRLFESQLFPVCASD 181 I+ + + D LR G + +F+D+DL + E + V + D Sbjct: 121 AMTIQTGNDPDIQDMLRRGDIEIAILEGNARTFNDKDL-----KTFTIGEDHIVLVASKD 175 Query: 182 EHGEALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 AL ++ H L+ Y ++ + + L FV + ++ + Sbjct: 176 HPLAALPSVTPSHLNEEQLILYEKDCSLCPFVQEYLMEQRVGQHRGTFV-NSRDVARAFV 234 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVI-PIQAYAYRMNT 282 G G+A++ + ++++ G LV L+ + L + I + + Sbjct: 235 KAGVGVAFINHGTVAEDLKRGDLVSLSIEGLEMKRIDVVCFYRQS 279 >UniRef50_B7RLZ1 Transcriptional regulator, LysR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLZ1_9RHOB Length = 301 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 12/285 (4%) Query: 19 FLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQI 78 F+ + K ++F+ AA S ++ A S++++ LEQ + V+L NR + ++E+G +++ Sbjct: 10 FIAVVKAQSFAGAARSLGITSSAVSKQVQNLEQDLQVKLLNRTTRNVSVTEEGAVYYEGA 69 Query: 79 RHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDE 138 L+ L+ ++ + +KI+ SL I+ + + +DE Sbjct: 70 ARALEDLQEAQEQIYELKSRPRGPLKISFPLSLGNKYFGQAIASFAAQYPEVDLDVSLDE 129 Query: 139 A-VDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS----DEHGEALFNLAQP 193 VD + EG + L + R+ F +CAS + HG Sbjct: 130 RFVDIVNEG---FDLAVRIGSLKDTSLVARRMASCP-FVICASAGYLETHGTPQTPGDLA 185 Query: 194 HFPLLNYSRNSYMGRL-INRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAI 252 +L ++ NS + + ++S F + E+L AL G GIA LP + + Sbjct: 186 DHNVLAFTGNSGLHEWRYQDATGQIGQVSLRGNFKADSGEILCSAALQGVGIAILPVFYV 245 Query: 253 QQEIRSGKLVVLNRDELVIP-IQAYA-YRMNTRMNPVAERFWREL 295 + +++ KL + D + P YA ++ N + F L Sbjct: 246 AKHLKTRKLQAVLPDYVTSPKRDIYAVFQPNRFQSTRLRLFVDHL 290 >UniRef50_UPI00017446F7 LysR family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017446F7 Length = 293 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 22/298 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + F L + +FS AA N++Q A S++IR LE+ GV F R ++ + Sbjct: 1 MQLQIFKIFCDLVETGSFSLAAAKNNITQSAVSQQIRVLEEKYGVTFFERGGKKFSITPE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+IF R +L +S + L D +K++ +S+ L LP+ + + P Sbjct: 61 GEIFDRASREILSVYDSINSRLNELRDVVAGPLKVSTVYSIGLHELPAKLKKFRESHPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDC---IFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 IE D + +G++D F + ++ FD E ++ +CA Sbjct: 121 DVQIEYKRSPMIYDDVADGRADIGLVAFPVRGKGIISDVFD-----EDEMVVICAPTHRL 175 Query: 185 E-----ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA- 238 L L F + + ++ + I+R L H+ ++F E +K+ Sbjct: 176 AKKRKVKLKELQGESF--VAFDPDTPTRKAIDRALKGHA-ITFLQQHEFDNIETVKRAVE 232 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWREL 295 + G I+ +P + +E+ G+L + ++ + R R+ P F L Sbjct: 233 VAGV-ISIVPRRTVDKEVAEGRLAAVKVEDASLNRPLGILRKQARITTPAMREFMNVL 289 >UniRef50_Q1LFE8 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=Q1LFE8_RALME Length = 350 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 11/296 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ T+ + +L + + S AA +S+ S+RI LE+ +G L R +Q S Sbjct: 28 MSLRTEEIEAYLRVVELGGISAAARHMGLSKSVVSKRISDLERELGASLLQRSSRRMQPS 87 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT 128 E G+ F+ Q R + QL + + +++I A S L +I++ Sbjct: 88 ESGRYFYEQARAAMSQLTQAAQSVSEAAQEVCGELRILAPMSFGTRWLSPLIAEFGRANP 147 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 ++++D+ + L G D L ++ +L S+ C+ D G Sbjct: 148 RLRLSLELDDRLVDLAYGGYDVAIRIT--RLRDSDLIARKLAPSRRVVCCSPDYAARAGL 205 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE----LSFSTFFVSSMSELLKQVALDG 241 H L+YS NS G++ H E ++ + ++ E+L+ L G Sbjct: 206 PRTVEDIGHHACLSYS-NSLPGQIWTFQPDAHEEAPKTITPRGIYTANNGEVLRDAVLAG 264 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELR 296 G+A LP + + +++R+G+L+ + + +A Y N + + L+ Sbjct: 265 HGLAVLPRFIVWEDLRAGRLIEVQPGATPVEDGIFAVYPRNAFGSAKLRALVQFLQ 320 >UniRef50_B7GJV0 Transcriptional regulator (LysR family) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJV0_ANOFW Length = 294 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 129/297 (43%), Gaps = 16/297 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+TL + +NF++ A ++SQP+ S I+ LE+ +LF R LQ++ Sbjct: 1 MMYEQLKTFITLAEVKNFTKTADILHLSQPSVSLHIKNLEKEFQTKLFIRSPKELQMTPT 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + + + ++ E ++ D + +KI A+ ++ +LPS + M P Sbjct: 61 GELLYDRAKKMITLYEQTKQDILEHHDCVKGTLKIGASFTIGEYVLPSFLFSMQNDYPEL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIF---SFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + + E V+ +R Q+D ++++L PF + +L V ++D Sbjct: 121 HLEVIIGNTKEIVELVRTYQADVGLIEGQTNEKELAVYPFM-----QDELVIVASNDHPL 175 Query: 185 EALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 ++A + S N R + L + + S ++ +K+ + G Sbjct: 176 IHQKDVAINDLQNQIWITRELGSGTREYFNH-FIRSNGLKVKSLMIISSNQGIKETLMRG 234 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 +A+L + I++E++ G L V+ + Y Y + N + F L++ Sbjct: 235 NSLAFLSRHVIERELKHGHLSVVRVNHPPFYRTFSYLYSPTMKNNKLIHLFIDLLQQ 291 >UniRef50_B9YAR8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAR8_9FIRM Length = 297 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 123/298 (41%), Gaps = 17/298 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + F + + + ++AA +SQPA S + LEQ +G L +R ++E+ Sbjct: 1 MTIRQWKVFRAVVEQGSLTRAAQVLYMSQPAVSHVVTELEQQLGYTLLDRIGRHCAVNER 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G + ++ +L+ +E A ++I ++ +++ LPS+++ P Sbjct: 61 GLQLYHKLVPILEAIEDLEQNTADFEKQA--PLRIGSSITIANMWLPSLVAHFHSLYPKT 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFS---FHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 ++ E V K+ + D F+ +E L+ PF RL VC D Sbjct: 119 PMRVQVDRAKEIVRKVLVNEVDLGFTEGVCEEECLVRLPFSRYRLT-----FVCRPDWPA 173 Query: 185 EALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 L L + S + ++ L R ++ + S S++LKQ AL G Sbjct: 174 AKHKILKLDQLAEQAWLLREQGSAIRDSLDSAL-RLRQIQVKPAWESVNSQVLKQAALAG 232 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 GIA LPE ++ ++ SG L + + + + Q + + A R W+ L E Sbjct: 233 LGIALLPEQMVRPQLASGALTEVKIEGIELENQNWMIYHRDKFESEAIRGWKHLIEQT 290 >UniRef50_Q11LB7 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11LB7_MESSB Length = 311 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 4/284 (1%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + T++L F+ + + R+FS AA N +Q A S RIRALE +GV+L +R + L+ + Sbjct: 15 MNTRFLETFVWVARLRSFSAAAERLNSTQAAISNRIRALEAELGVKLLDRNSRSVTLTRE 74 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPS---IISQMPPLF 127 G++ ++ + ++ + + ++ D Q + I ++ P ++ + P+ Sbjct: 75 GRVAFAKAQRIVNLASAFVLDV-SHPDAIQGSVSIGIIDTIIHTWFPDFAKLMREAFPML 133 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + +L+ G+ D F + F+ AS Sbjct: 134 KLSLTVDATPKLYQQLQHGELDLAFGVGSAASDGFYAVELGTFDCVWVGSPASRFSSPPT 193 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 P+++YS S + + L RH+ + F ++ + + +G GIA+L Sbjct: 194 SIADIEDCPIVSYSVGSVPDQSLRALLGRHAIPLENRVFNTNSLPTIIHLVREGVGIAYL 253 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERF 291 PE I+ I S +L++L E + P+ +A +P+ ER Sbjct: 254 PECIIRPLISSKELILLPIGEKLAPMTYHAIYAGHHEDPLPERV 297 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 128/296 (43%), Gaps = 14/296 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + + +QAA +V+Q A SR+I LEQ +GV LF ++ L L+ Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F S++ +L+ L+ ++E+ D Q +I++ +SL + ++PS++++ P Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA- 186 + + + G+ D F + + ++ L E H A Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISPFPENHDQVTGNVVLTED--LVAILPPGHPLAG 178 Query: 187 -----LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 L L F + +S+ + ++ + F ++ ++ + G Sbjct: 179 EQSIKLSQLKDEKF--ILFSKGYSLRPIVWHACLEAG-FTPKIAFEGEETDTIRGLVAAG 235 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 G++ LPE A+ Q + V + V +R++ ++ VA+ F L E Sbjct: 236 MGVSLLPEMALFQSFTLQPIRVRISEPKVTRTIGLIHRVDEKLPLVAQSFRMFLLE 291 >UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCW0_BORBR Length = 305 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 15/299 (5%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 N+ + L F+ + R+FSQAA + +V+QPA + I+ LE +GV LF R +L+ Sbjct: 1 MNVTFRQLTAFIEVASSRSFSQAAQALHVTQPALTAMIQKLEAQLGVVLFTRTRRGAELT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPP 125 G+ +++ +L LE + ++RG + + +A SLS +PS+I+ Q P Sbjct: 61 TTGRELLPELQRILANLEVVIEDVRGAASPRGGTVTLACIPSLSNTWIPSLIARVEQAYP 120 Query: 126 LFTWAIEAIDVDE--AVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 ++ + + LR G D + + + L +L V D H Sbjct: 121 RIKVILKDAMTENRSIHEMLRTGDIDYGVG--SPSVEQDGLEFDLLAHDELVAVVPQD-H 177 Query: 184 GEALFNL----AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 A L PL+ S S++ L++ + +S S+ + Sbjct: 178 PLARRTLVRWSELAESPLIGMSYQSHVRMLVDEAFA-ANGISKRPKREVSLITTAIGMVR 236 Query: 240 DGCGIAWLPEYAIQQ-EIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 G G++ LP AI+ + K++ L+ + P+ + + ++P A R +++ Sbjct: 237 AGLGVSVLPTTAIEVCNVAGLKVLRLHAPRVRRPL-GFLHLPTRSLSPAARLLLRFVKD 294 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 12/296 (4%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 N+ TK L + L + ++F QAA+ ++SQ A S I +E IG LF R ++L+ Sbjct: 4 ANLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAVELT 63 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 + G +F + + +L+ + L + + +AA SL+ LLP + ++ P Sbjct: 64 DAGHVFIAHAQEILRDTQRALRAVTDTVQLRTGSVTVAALPSLAASLLPKVFAEFTRIHP 123 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE--- 182 ++ A D +R+G+ D + D + + +L E Q F +C D Sbjct: 124 GVRLSLLDTLSGPAFDLVRDGKVDFALTAADP--KQEDLAYEQLMEDQFFLICPDDHPLS 181 Query: 183 -HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 H + +P ++ ++ + + I+ L L F+ F + + G Sbjct: 182 KHAGPVAIENTLDYPHVSMPSSASVRQYIDADLHSKG-LYFAPVFEVDHIATIGALVSAG 240 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 GI+ LPE A+ +++G+LV + I R + + A+ +R Sbjct: 241 LGISALPETAV-SLLQAGRLVQIPLSPPGIQRPLGMVMRRHAPRSSAAKALEALIR 295 >UniRef50_C0D9J1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9J1_9CLOT Length = 299 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 121/288 (42%), Gaps = 10/288 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + F+ + + +NFS+AA SQ A + +I+ LE+ + +LF+R ++L++ Sbjct: 1 MEIRNIITFVRIAELQNFSKAARQLGYSQSAVTMQIKQLEEELHAQLFDRIGKHIRLTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ +L + + + +++I A SL + +LP +I + P Sbjct: 61 GQRLLPHALEILDGVRRA-QSITREPEEVSGRLRIGTAESLLINVLPPVIIEFSCLYPRV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + V + ++ + D F D + + V ++ Sbjct: 120 EVSTQTASVADLFAMVQRNEIDL-LYFLDRKTNFPEWIKVAERPEPAAFVASAQSRLAGQ 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ P L + + + L S + F + ++++ ++ L+ GI Sbjct: 179 RQISLERLLEEPFLLTEKGISYRYAMEQVLAE-SGMEIHPFLETGNTDIITKMLLENRGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERF 291 ++LPE+ ++ I+ G+L VL+ I + + Y N + P ERF Sbjct: 238 SFLPEFVVRDYIQDGRLAVLDTVCPEICMWSQLVYHKNKYLTPQMERF 285 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 116/300 (38%), Gaps = 14/300 (4%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 N + L FL + + FS+AA + ++Q A SR + LE+++GV L +R + L+ Sbjct: 1 MNYTLRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPP 125 G+ + LL QL+ L + R ++ + ++ IA A ++S L+P + + P Sbjct: 61 HAGQALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + + ++++R G D L+ L VC D Sbjct: 121 EIRLTVRDNVQADGIEQVRAGGVDFGVLIDP--LVHDGLTIEPLVTDPFCFVCRRDHPLA 178 Query: 186 -----ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 L LL+++ S LI+R RH + S + + Sbjct: 179 QEKTVPWSALDGMRLVLLDFASGS--RPLIDRVFGRHGIVP-RVVQELGHSASVFGMVEA 235 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 G G + LP Y++ + LV R + ++P AE W +R L I Sbjct: 236 GIGASVLPTYSL-PLPAASPLVWRPLVPREERRIVMVRREDRSLSPAAEAVWALVRNLTI 294 >UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I114_DESAP Length = 296 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 120/296 (40%), Gaps = 13/296 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + +L F+ + K ++FS+AA + +++QPA S+ I LE G +L NR ++L++ Sbjct: 1 MNLSYLETFVMVAKHKSFSRAAKTLSLTQPAVSKHISLLEAHYGTKLVNRTSRRVELTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G + + ++ +E E+ S+ + ++ I A+ +LP I+S PL Sbjct: 61 GIVLYHFAGRIIATMERAKEEIVSFSEEVKGRLSIGASTIPGHYILPRILSDFKKEYPLV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 ++E + + +++L+E D +P + F S + +H Sbjct: 121 NVSLEVSNTGKVINRLQEEAIQVGVIGAPVD---SPEINCTEFSSDEVVLIMPRDHPLVF 177 Query: 185 -EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRH--SELSFSTFFVSSMSELLKQVALDG 241 + L ++ +S R++ L S +E + G Sbjct: 178 RKELVTDDLVGEKVVVRENDSGTRRIVEEKLAAADIPLDSLQIAGEFGSTEAVLAAVEAG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELR 296 GI+++ +A ++ G++V+ +L Y Y + ++ F ++ Sbjct: 238 LGISFVSRWAAEKVALEGRIVMRTLQDLRFSRSLYIIYLRDRSLSRPTHAFLSFIK 293 >UniRef50_C0QLD9 LysR n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLD9_DESAH Length = 299 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 117/296 (39%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+ + + ++FS+A ++SQP S I+ LE+ L +R ++ Sbjct: 1 MDLWQLRVFVNVVEQQSFSKAGEVIHLSQPTVSSHIKELEEYFECRLMDRMGRNTVPTKA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI---ISQMPPLF 127 G++ S + LL+ + + + + + I + S +LP++ I+Q P Sbjct: 61 GELLFSYAKRLLRLRDETESAISDFLGKRKGHLVIGGSTIPSGYILPAMIAPIAQAFPEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + A D E ++++ +G + + +L + ++ + AS Sbjct: 121 SLSFVAGDTAEIINQITKGDIEVGI--VGARVKSPLVAQEKLVDDEMKLIVASSHKWSDR 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVALDGC 242 ++ P L S R I R + + + + Q L Sbjct: 179 SSVTPDMLLTEPFLAREEGSGTWRSITRNMEEAGLNTKALRIIATMGNTASMIQAILGNA 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELRE 297 GI+ L A+ + SG+L L + L + Y R ++P+++ F + L+E Sbjct: 239 GISILSTIAVADLLASGRLKALTVEGLDLKRSFYITTHGKRTLSPLSKTFIKFLKE 294 >UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD1_9GAMM Length = 297 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 114/246 (46%), Gaps = 9/246 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 +I + F T+ + +F++AA+ +SQPA S ++ LEQ++G +L R + L+ Sbjct: 1 MSIPINQIVVFTTVARTGSFAEAAIQLYLSQPALSVAMKNLEQSLGGKLLARTTRSVTLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 +GK F+ R LL + E ++ ++R + K+ IAA + + LP I+++ P Sbjct: 61 PEGKAFYPVARRLLSEWEQSMQDVRNHFALGRGKLDIAAMPTYTTNFLPKILAEFHSQYP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCA---SDE 182 + + + V +RE +S+ +F ED + F L++ + + Sbjct: 121 NIHITVHDVIAENVVQMVREERSELGITFAPEDAPDLHFQ--PLYQDRFVAILPFKHPLL 178 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + L + +P L+ R + +LI++ L L + F S + ++ +G Sbjct: 179 EKQTLKWIDLLAYPHLSLQRPAGTRKLIDQALQEKGLL-LTPAFESHQLVSIGRMVNEGL 237 Query: 243 GIAWLP 248 G++ +P Sbjct: 238 GLSVVP 243 >UniRef50_B3E2N5 Transcriptional regulator, LysR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E2N5_GEOLS Length = 294 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 119/293 (40%), Gaps = 9/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L FL + R+FS+ + +++Q S+ IRALE + V LF+R + + L+E Sbjct: 1 MTLKQLEVFLAVADTRSFSKGGEAVSLAQSTASQHIRALEDELNVRLFDRSASQVALTEV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G++F+ + + + +R Q +++ A+ + L+P ++ P Sbjct: 61 GRLFYDHAAGICRHCSEAVEAVRRFQGLEQATLRVGASTIPAAFLIPDMLGHFSTAWPGV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ D E + L++ + + D + + + ++ V + Sbjct: 121 RLELQQGDTHEVIRLLQDERVELAVVGGHID--DDSINMQEVMTERIVLVARPGLSPVGI 178 Query: 188 FNLAQ-PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVS--SMSELLKQVALDGCGI 244 Q PL+ S ++ L ++ V+ SE +++ L G G Sbjct: 179 LEYNQLAQLPLVIREAGSGTRTAVDSALQKNGIDPRRLRVVAQLGSSEAVRRAVLSGAGA 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELR 296 A++ A+ E+ G L+ L L I Y A+R ++P A F ++ Sbjct: 239 AFVSTLAVGHELADGTLIELTVSGLTINRSFYLAWRRGKSLSPAALEFMAMVK 291 >UniRef50_Q8TVB0 Transcriptional regulator of the LysR family n=1 Tax=Methanopyrus kandleri RepID=Q8TVB0_METKA Length = 304 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 115/297 (38%), Gaps = 10/297 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + + + F + + ++FS+AA + ++Q S +I +LE+ LF R ++L Sbjct: 1 MSDPRFSYFRTFREVVRQKSFSKAAEALGITQGTVSNQIASLERFFDARLFVRTPEGVEL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 +E+G+I I +L +E ++ S K++++ + LLP + + Sbjct: 61 TEEGEIALEAIETVLDAVERAKDKIAAVSKEPSGKVRVSTSTVPGGYLLPGSVKEFRSEY 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P I D EA + + G +D D + + + + +L + D Sbjct: 121 PKVDVIIRVCDSREATEHVLSGDADVAIVGTDAFVTRKSVEVVPIASEELVVILPPDHEL 180 Query: 185 EALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVAL 239 ++ P +N S R + + L H F +E + Sbjct: 181 ADAMEVSIDDIVGEPYVNRESGSGTRREVEKYLKSHGLGFEDFKIVEEVGSTEAVITSVS 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWREL 295 G GI+ + E A ++ +G L+ + R E YA + + ++ E FW L Sbjct: 241 QGAGISIISERAAKRAESAG-LIRIARLEDRPRRFFYALKSDKPLHASATEAFWEFL 296 >UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XTW7_PSEMY Length = 309 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 115/285 (40%), Gaps = 11/285 (3%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 + L FL + + + ++AA + +++QP+ S ++ LEQA+ +ELF + L L++ G+ Sbjct: 13 FRQLETFLAVAEHLSVTEAARTLHLAQPSVSTQLAKLEQALQMELFEQLGKRLYLTDAGR 72 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFTW 129 + R + L+ L + ++++ A + + L+P ++ P Sbjct: 73 EVQAGAREIFDALDRLEMRLAQLNGLTTGQLRLGAVTT-AKYLVPRLLGPFCRQYPQVEV 131 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH--GEAL 187 + + + + L + + D D + + L E+ L + + G+ + Sbjct: 132 QLNIANRSDVIRCLEDNRDDLYVFSQPPD--HLDLECVALAENPLVVIAPAGHRLSGQRI 189 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 P L+ S I RH + + +E +K+ G GIA L Sbjct: 190 RWEQLAQEPFLSREPGSGTRLAIEDHFARHG-WPYKPHMTIASNEAIKESVAAGLGIAIL 248 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERF 291 + + G LV L+ ++ I Q Y R ++P A+ F Sbjct: 249 SRHTLI-HTAVGNLVELDVEDFPIANQWYLVRWRRKALSPAAQAF 292 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 124/297 (41%), Gaps = 14/297 (4%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 + + L + NF++AA + +VSQPA S++IR LE ++GV+LF+R + ++ G+ Sbjct: 15 LRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGR 74 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFTW 129 ++ R L +L++ L SD ++ ++++ + S L+ +I + P Sbjct: 75 VYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAI 134 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD----EHGE 185 + + +++ + L D F +E D LF+ QL V A + Sbjct: 135 ILTELPLEQITEALISDALDLAIGFAGSHAVE--IDSQPLFDEQLCLVMAKPASEKQAAL 192 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 L +L F LL + +L++ + ++ +L +V G Sbjct: 193 TLEDLQALRFALL--APGFATRQLLDAWCQMQN-FKPIIGLEANSIAILLKVVAQGRMAT 249 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVL 302 LP+ +++ + G V L A R N + A+ F + + ++ + Sbjct: 250 ILPDAIVRK--QPGLCEVQTIPALPGRTVALLRRKNGYQSAAAKAFAKLVSDIRTKI 304 >UniRef50_C7BI08 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=C7BI08_PHOAA Length = 301 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 11/293 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + + F + + +F AA +S+ A S+ I LE+ + L NR + ++ Sbjct: 4 MDKLRAISVFRRVVELGSFKAAAQDLGLSKAAVSKNINQLEEYLKSPLINRTTRNMHITA 63 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM-PPLFT 128 G+ ++ Q+ ++L +LE+ + S IK++ S+ L L +I Q + Sbjct: 64 NGRNYYHQVCNILDELENADLSVMETSHTLTGSIKVSIPMSMGLKALNPLICQFMHTHPS 123 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA-- 186 ++E + +D+ +D + G D E L ++ +L + +CAS + EA Sbjct: 124 ISVEVVMIDKYIDLIEHG-IDVAIRGGGE-LSDSSLRSRKLIKVPRV-LCASPAYIEASE 180 Query: 187 --LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFST-FFVSSMSELLKQVALDGCG 243 L L YS +S R I + +V + LKQ AL G G Sbjct: 181 KILIPENLTSHNCLVYSLSSSPRRWIFHNQNDVKVVDLKPGTYVVNNGLALKQAALSGHG 240 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 + LPE + E+ SGKLV L + YA + + + F L Sbjct: 241 VILLPELLVTDELLSGKLVRLLPEWEADMQALYAIQPFHKEHSNKTRAFIDFL 293 >UniRef50_C2FRR6 LysR family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FRR6_9SPHI Length = 295 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 123/295 (41%), Gaps = 13/295 (4%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 + IE + L F L + ++ +AA ++SQ A S++I+ LEQ +GV LF+R + LS Sbjct: 6 NQIELRQLRYFRALAEELHYHKAADKLHISQSALSQQIKLLEQQLGVSLFDRLNKKISLS 65 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 + G++F+++ +LQQ+E ++ L + +KI S LP I + P Sbjct: 66 DPGELFYAEAVRILQQVERSMERLDQFHTGSAGTLKIGFVASAMSSFLPEAIKKFHTAYP 125 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE--- 182 E ++ E + L G D F ++ + +R+FE + + Sbjct: 126 AIHLRFEEMNNFEQLPALENGDIDIGFMRSNQ--VRDQMHILRVFEETFTLILPRNHRFG 183 Query: 183 --HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 H + L L F L +++ + + I L S + + + Sbjct: 184 NYHFKDLSILKDEDFILFPNAKSEFYFQQI-INLCSDSGFYPRITHQAIHGPTIFSLVGC 242 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G GI+ +P Q + + ++ + + Q +A + NP +RF + + Sbjct: 243 GMGISIIPTSLAQ--LHTEDVIAIELKAIPQRTQIFAVWDKSNQNPQIQRFMKSI 295 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 111/286 (38%), Gaps = 12/286 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + +F++AA +V+QP S ++R LE +G +L +R ++ +E Sbjct: 1 MELRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPPLF 127 G R L + + + + + ++ I S +LP +++ ++ P Sbjct: 61 GVAVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + D V L+ G+ D L + L + Sbjct: 121 EITLGEDNSDRLVQALQHGELDLALIGSARTGPPPGLATQTLTDEPLVAAVSHTHPLATR 180 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L A PL+ R + + ++ + + F +S L +A G G+ Sbjct: 181 STLTVAALAGSPLMCLPRGTGIRTALDDACA-TAGVEPRIAFEASDPVPLALLAARGLGV 239 Query: 245 AWLPEYAIQQEIRSGKL--VVLNRDELVIPIQAYAYRMNTRMNPVA 288 A LP RSG+L + L R + I+ A+R ++P A Sbjct: 240 AILPASLAAA--RSGELHAIALTRPQPRGRIEL-AWRAEGPVSPAA 282 >UniRef50_C1SP16 Transcriptional regulator, COG0583 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP16_9BACT Length = 315 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 120/308 (38%), Gaps = 11/308 (3%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 + C ++ K + F+ + K ++FS+AA +SQP S I LE+ +GV+LF+R Sbjct: 10 ISICNNTESAMDFKQIEAFVFVAKYKSFSRAAEKLLLSQPTISTHISTLEEQLGVKLFDR 69 Query: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 + L+E G++F+ +L E + ++ + + I + + +LP +I Sbjct: 70 LSKEVVLTEAGQVFYPYAVDILDLRERSHEAVKEFLNEVSGHLHIGYSTVAAEFILPEVI 129 Query: 121 SQMPPLFT---WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV 177 + + + ++ + + +L +G D + + ++ L + ++ + Sbjct: 130 KKFKEDYYKTFFTLDNGNTQNVIQRLSDGILDLAI--VARKIPKKDLEYKVLTKDKIVLI 187 Query: 178 CASDEH---GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSE 232 + +++F + S + S + V S + Sbjct: 188 VHKNHKFFTRDSVFIEEILGEEFITREVGSGTRASVEHAFKNKGYDFDSLNAVAVLSSTF 247 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMN-PVAERF 291 ++ GIA++ E A+ ++ + + +L++ Y R N + + F Sbjct: 248 SIRNAVKRELGIAFMSEMALAEDDHDTSVKAIPVTDLMVEKDVYVVYSKNRTNKKLLKHF 307 Query: 292 WRELRELE 299 + + + Sbjct: 308 IETILKFK 315 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 114/293 (38%), Gaps = 7/293 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+ + + R+F++AA + +V+QP+ S++IRALE +G +LF R + L++ Sbjct: 1 MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ R +L ++ E++ ++ + +++ A SL GLLP ++ P Sbjct: 61 GEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 ++ + V L G D L L V A + Sbjct: 121 QLLVQESGSHDLVRDLARGALDLALVVLPLPSPSPALTTEELLREDLVVVSAPNLPPPGD 180 Query: 186 -ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +A L R+ Y R + R + + A G G+ Sbjct: 181 GRQVRIADLEHEQLIMFRHGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLGFARAGLGV 240 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 A +P Q S ++ + L I A A+R + + A+ F R L E Sbjct: 241 AIVPSMVAQNVDPSLRVTPIAPPALHRTI-ALAHRTDVALPRAAQEFRRTLLE 292 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 14/290 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + + ++A+ + +V+Q A SR+I LE+ +GV LF+R +QL+ Sbjct: 1 MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F Q L +L+ A + +D A+ +++ +SLS +LPS+IS P Sbjct: 61 GQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA- 186 T+ +E + L G D F + IR F+ +L + Sbjct: 121 TYQFMEGTNEELTEMLLSGVLDMTF-LSPVPESSEQIEAIRFFDEKLKLIVPKTHPLAEN 179 Query: 187 ----LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 L LA F L Y + + +++ + F S ++ + G Sbjct: 180 FTVSLKELASEKFVL--YPEDFDLYKIVTKA-ANKKGFEPQIAFQSRDFYTIQGLVGAGL 236 Query: 243 GIAWLPEYAIQQEI-RSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERF 291 GI+ LPE + I + K + L EL + ++P F Sbjct: 237 GISILPEMILDGAIFKETKSIALRDKELRRSVGI-ITTKKRNLSPSENLF 285 >UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DBCAD Length = 312 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 118/300 (39%), Gaps = 11/300 (3%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + L F+ + +F QAA+ SQPA SR IR EQ +G LF+R + +++ Sbjct: 2 DLSLQQLEAFVQVAAAGSFRQAALRLGQSQPALSRFIRQAEQTLGARLFDRDTRHVSITD 61 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPL 126 GK + +L+ + L + +I +AA S S+ LLP ++ Sbjct: 62 AGKELLPIAQRVLRDFDDALGDFGEFMAGHSGRIVVAALPSTSIALLPQALAAFSRTHSQ 121 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 T+A+ + + + EG++D S + H LF+ VC D+ A Sbjct: 122 VTFALTEAPAEVLLALVEEGRADFGISVRPAPRQRLQYRH--LFDDPFVLVCRRDDPLAA 179 Query: 187 LFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 ++ F P + S + + + R + + G G Sbjct: 180 RESVPWSAFSTRPCIVAGSRSSIRPVTDAVFLRQ-RMPVHPVLEYPSVASCGALVAAGVG 238 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELEIVL 302 I LP A+ + + +LV L ++ R+ ++PV++ F L + VL Sbjct: 239 ITALPMLAL-ELLNMVELVALPLQRPLMSRPIGIVTRIGRSLSPVSKAFMASLTQQTCVL 297 >UniRef50_Q47YE9 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47YE9_COLP3 Length = 309 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 114/293 (38%), Gaps = 9/293 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 E + F+ + + +F+ AA N S+ S+ I LE+ +GV+L R L L+E G Sbjct: 10 ELSDVAAFVCVVQTGSFTAAAEQLNTSKSVISKYITRLEKRLGVKLLARTTRRLTLTEIG 69 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WA 130 + F+ R L+ +++ + + +KI A S + + + + Sbjct: 70 RTFYEGSRQGLEAIDNAEEAVSFLQGKPRGTLKINAPLSFGALHIAPALEEFIHRYPEMQ 129 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGEAL 187 I+ D+ +D +++G D + LE R+ V A + + G Sbjct: 130 IDLRFDDKKIDMIKDG-FDLTVRITHQ--LEGNLIARRIAPCHHALVAAPNYLAKRGTPK 186 Query: 188 FNLAQPHFPLLNYSRNSYMGRL-INRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 ++ Y ++ + + + S +++ L G GI+ Sbjct: 187 RPEDLVAHNVITYQYQQSPWEWEFTAAKSKPKRVRVNGSVQMNNSLAIREAVLAGVGISR 246 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELREL 298 +P +A+ ++I+SG+L+ L ++ Y + M P F + ++ Sbjct: 247 MPTFAVGEDIKSGRLIQLLPKYSLLEHSIYLVFPERNHMAPKTRAFIDYMVKI 299 >UniRef50_UPI0001B4C1F4 LysR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C1F4 Length = 297 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 112/288 (38%), Gaps = 15/288 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L FL + + +F++AA + Q + + I+ALEQ +G LF R + L+ Sbjct: 1 MELKHLTTFLAVARHMSFTRAAQDLDYVQSSVTAHIKALEQDLGAALFERLGRRITLTHA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYA---QRKIKIAAAHSLSLGLLPSIISQMP--- 124 G+ R L Q E + G S + ++IAA SL LLP ++ + Sbjct: 61 GRELLPHARQLAHQAEQARQAVEGASGDPRTIRGTLRIAAPESLCAHLLPPVLRALMDHF 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P + + L EG D F E+ + AP L + + A H Sbjct: 121 PHLRVVFGPAGRNTLLTSLNEGTLDAGFLL--EEKITAPMATTELLAQEPLRLIAHPGHP 178 Query: 185 ----EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 + LL +++R L R + + FVS E LK+ A Sbjct: 179 LLHRRHVDTADLADETLLLIEPGCAQRDVMDRELGRAAIHPTTMEFVS--VEALKRCAAA 236 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVA 288 G G+A LP A+ E+ G++ L + + + R R+ Sbjct: 237 GLGVALLPAAAVTDELARGEVAPLPWTSKPV-LGIHYLRHKDRLPSTV 283 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 112/302 (37%), Gaps = 21/302 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L L + + +NFS+AA +++QP+ S+++ LEQ +GV+LF R + ++L+ Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G F + + ++ + E+ S ++ + + LLP ++ P Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + EG +D ++ I ++ + +H Sbjct: 121 QVTLLEDTSLNLEKLTAEGGTDLSLLSLPLLEPTLSYEPI---GEEIIDLAVPPDHPLTK 177 Query: 188 FN--LAQ-------PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 L Q + P + + ++ L R + + F S+ E ++ + Sbjct: 178 TPGVLEQGVEMKQLENEPFIVLKKGQGFRKMTAD-LCREAGFEPNVVFESNNIETVQSLV 236 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRD---ELVIPIQAYAYRMNTRMNPVAERFWREL 295 G GI +P + + + +L+ AYR ++ AE F Sbjct: 237 AAGMGITLVPRFIARA--KRSELIPAYLPLAAPAPSRTLVIAYRKGRYLSKAAEAFIETF 294 Query: 296 RE 297 ++ Sbjct: 295 KK 296 >UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=Rhodobacteraceae RepID=Q1GMA2_SILST Length = 305 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 105/283 (37%), Gaps = 8/283 (2%) Query: 20 LTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIR 79 + + + + F+ AA VS+ A S+RI +E +G +LF+R + L+E G+ F+S Sbjct: 11 VAVAETQGFAAAARRLGVSKSAVSKRITQIENRLGAQLFHRSTRNVSLTEAGEHFYSHAV 70 Query: 80 HLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WAIEAIDVDE 138 + + + + + ++++ + + +IS + +I+ + D Sbjct: 71 RAQEAAQEAEDSVLALQEAPKGRLRVNVPMAFGRLHVAPLISGFLARYPGVSIDMVMDDR 130 Query: 139 AVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEALFNLAQPHF 195 VD +G + L ++ ++ + V A HG Sbjct: 131 MVDLFADG---FDLALRGGTLADSALVARKIAALRNVLVAAPTYLARHGAPQTVSDLRFH 187 Query: 196 PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQE 255 L YS + + + S + + E L++ L G GI LP + + Sbjct: 188 NCLQYSFSRDFQEWVFDCDGKAETFRPSGSYSVNNGEALREAVLGGTGIGRLPTFTAGPD 247 Query: 256 IRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWRELRE 297 + SG+LV + + YA R P F L E Sbjct: 248 LASGRLVRVLPQCQLPSQTLYAIYPERRYLPTKVRVFIDYLLE 290 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P39376 Uncharacterized HTH-type transcriptional regulat... 308 1e-82 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 293 6e-78 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 286 6e-76 UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=T... 286 7e-76 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 277 3e-73 UniRef50_A4G228 Transcriptional regulatory protein, LysR family ... 276 6e-73 UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=... 276 9e-73 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 276 9e-73 UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=... 274 3e-72 UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=... 273 5e-72 UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clos... 272 7e-72 UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteri... 272 7e-72 UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=B... 272 1e-71 UniRef50_P96725 Uncharacterized HTH-type transcriptional regulat... 271 2e-71 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 270 4e-71 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 269 9e-71 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 269 9e-71 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 269 1e-70 UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=C... 268 2e-70 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 268 2e-70 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 267 2e-70 UniRef50_Q0TQC8 Transcriptional regulator, LysR family n=10 Tax=... 266 6e-70 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 266 6e-70 UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=P... 266 7e-70 UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n... 266 8e-70 UniRef50_A5N491 Transcriptional regulator n=2 Tax=Clostridium kl... 266 8e-70 UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=F... 266 9e-70 UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=P... 266 9e-70 UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibaci... 265 1e-69 UniRef50_B7JB31 Rubisco operon transcriptional regulator n=5 Tax... 265 2e-69 UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=B... 265 2e-69 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 264 2e-69 UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=B... 264 2e-69 UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=L... 264 3e-69 UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=... 264 4e-69 UniRef50_Q06610 RuBisCO operon transcriptional regulator n=4 Tax... 263 4e-69 UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=... 263 6e-69 UniRef50_Q3AEF0 Transcriptional regulator, LysR family n=1 Tax=C... 262 9e-69 UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=D... 262 1e-68 UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostri... 262 1e-68 UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=D... 262 1e-68 UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum ... 261 2e-68 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 261 2e-68 UniRef50_B2A0Q8 Transcriptional regulator, LysR family n=1 Tax=N... 261 3e-68 UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=C... 261 3e-68 UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=D... 261 3e-68 UniRef50_A7UH62 Putative LysR family regulator n=1 Tax=Desulfoti... 261 3e-68 UniRef50_Q0I520 Transcription regulator, LysR family n=3 Tax=Pas... 260 5e-68 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 260 5e-68 UniRef50_B3DZ70 Transcriptional regulator, LysR/CysB family n=5 ... 260 5e-68 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 260 5e-68 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 259 1e-67 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 258 2e-67 UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostri... 258 2e-67 UniRef50_Q5WD37 LysR family transcriptional regulator n=1 Tax=Ba... 258 2e-67 UniRef50_C8W3M6 Transcriptional regulator, LysR family n=1 Tax=D... 257 3e-67 UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=A... 257 3e-67 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 257 4e-67 UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus ... 256 5e-67 UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n... 256 6e-67 UniRef50_B6ITN2 Transcriptional regulator, LysR family protein n... 256 6e-67 UniRef50_A5N2N1 Predicted transcriptional regulator n=3 Tax=Clos... 256 9e-67 UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=B... 255 1e-66 UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=D... 255 1e-66 UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=F... 255 2e-66 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 254 2e-66 UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=P... 254 2e-66 UniRef50_B5HHH0 YwqM n=1 Tax=Streptomyces pristinaespiralis ATCC... 254 3e-66 UniRef50_D2M0Y8 Transcriptional regulator, LysR family n=1 Tax=B... 254 3e-66 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 254 4e-66 UniRef50_A9KJB0 Transcriptional regulator, LysR family n=4 Tax=C... 254 4e-66 UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=C... 254 4e-66 UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacte... 254 4e-66 UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=B... 254 4e-66 UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=A... 253 5e-66 UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=C... 253 5e-66 UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=B... 253 5e-66 UniRef50_C6Q178 Transcriptional regulator, LysR family n=1 Tax=C... 253 5e-66 UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=... 253 6e-66 UniRef50_C3AM26 YwqM (Probable transcriptional regulator YwqM) n... 252 9e-66 UniRef50_Q8EL24 Transcriptional regulator (LysR family) n=1 Tax=... 252 1e-65 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 252 1e-65 UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Ba... 252 2e-65 UniRef50_C1SP16 Transcriptional regulator, COG0583 n=1 Tax=Denit... 251 2e-65 UniRef50_UPI000178A79D transcriptional regulator, LysR family n=... 251 2e-65 UniRef50_B5XW05 Transcriptional regulator, LysR family n=14 Tax=... 251 3e-65 UniRef50_Q13AV2 LysR, substrate-binding n=2 Tax=Alphaproteobacte... 251 3e-65 UniRef50_C0Z947 Transcriptional regulator n=1 Tax=Brevibacillus ... 251 3e-65 UniRef50_B8FZV1 Transcriptional regulator, LysR family n=2 Tax=D... 250 4e-65 UniRef50_B7GJV0 Transcriptional regulator (LysR family) n=1 Tax=... 250 5e-65 UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=D... 250 5e-65 UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=C... 250 5e-65 UniRef50_Q2BGK4 Transcriptional Regulator, LysR family protein n... 250 5e-65 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 250 6e-65 UniRef50_D0S485 LysR family transcriptional regulator n=1 Tax=Ac... 249 8e-65 UniRef50_Q4K3G6 Transcriptional regulator, LysR family n=12 Tax=... 249 9e-65 UniRef50_Q2RLB0 Transcriptional regulator, LysR family n=1 Tax=M... 249 9e-65 UniRef50_B5YKH0 Transcriptional regulator n=1 Tax=Thermodesulfov... 249 9e-65 UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=c... 249 1e-64 UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=T... 249 1e-64 UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=P... 249 1e-64 UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=B... 248 1e-64 UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=M... 248 1e-64 UniRef50_C3BMM7 Putative uncharacterized protein n=3 Tax=Bacillu... 248 1e-64 UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=R... 248 2e-64 UniRef50_Q0F2Z7 Transcriptional regulatory protein, LysR family ... 248 2e-64 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 247 2e-64 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 247 2e-64 UniRef50_C0QLD9 LysR n=1 Tax=Desulfobacterium autotrophicum HRM2... 247 3e-64 UniRef50_UPI0001C34DF6 LysR family transcriptional regulator n=1... 247 3e-64 UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=C... 247 3e-64 UniRef50_A8ZUD0 Transcriptional regulator, LysR family n=1 Tax=D... 247 3e-64 UniRef50_C6QF64 Transcriptional regulator, LysR family n=1 Tax=H... 247 3e-64 UniRef50_B9ITM1 Transcriptional regulator, LysR family n=71 Tax=... 247 3e-64 UniRef50_UPI000174499E transcriptional regulatory protein, LysR ... 247 4e-64 UniRef50_A4WZV0 Transcriptional regulator, LysR family n=1 Tax=R... 247 4e-64 UniRef50_B0TI97 Transcriptional regulator, lysr family n=2 Tax=C... 246 6e-64 UniRef50_B7HRA4 Transcriptional regulator, LysR family n=70 Tax=... 246 7e-64 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 246 8e-64 UniRef50_B8EPF4 Transcriptional regulator, LysR family n=1 Tax=M... 246 8e-64 UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=... 246 8e-64 UniRef50_D1P1S5 Transcriptional regulator, LysR family n=1 Tax=P... 246 9e-64 UniRef50_C4XLK5 LysR family transcriptional regulator n=2 Tax=De... 245 9e-64 UniRef50_Q2WAU7 Transcriptional regulator n=7 Tax=Proteobacteria... 245 1e-63 UniRef50_Q01RY1 Transcriptional regulator, LysR family n=1 Tax=C... 245 1e-63 UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=C... 245 1e-63 UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n... 245 1e-63 UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n... 245 1e-63 UniRef50_UPI0001C36638 LysR family transcriptional regulator n=1... 245 2e-63 UniRef50_A9AUC8 Transcriptional regulator, LysR family n=2 Tax=C... 245 2e-63 UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=C... 244 2e-63 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 244 2e-63 UniRef50_A3EQ05 Putative transcriptional regulator, LysR family ... 244 2e-63 UniRef50_A8MEQ1 Transcriptional regulator, LysR family n=5 Tax=B... 244 2e-63 UniRef50_B6XF57 Putative uncharacterized protein n=1 Tax=Provide... 244 3e-63 UniRef50_A6LZH1 Transcriptional regulator, LysR family n=2 Tax=C... 244 3e-63 UniRef50_C0Z9T7 Transcriptional regulator n=1 Tax=Brevibacillus ... 244 3e-63 UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=B... 244 3e-63 UniRef50_B3E2N5 Transcriptional regulator, LysR family n=1 Tax=G... 244 4e-63 UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=B... 243 4e-63 UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 243 5e-63 UniRef50_A8VYP9 Conserved repeat domain n=1 Tax=Bacillus selenit... 243 5e-63 UniRef50_A8U3M8 Transcriptional regulator n=2 Tax=Bacteria RepID... 243 6e-63 UniRef50_C4GDC9 Putative uncharacterized protein n=2 Tax=Bacteri... 243 6e-63 UniRef50_A4Y0W1 Transcriptional regulator, LysR family n=13 Tax=... 243 7e-63 UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=un... 242 8e-63 UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=D... 242 9e-63 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 242 9e-63 UniRef50_C8N722 LysR family transcriptional regulator n=4 Tax=Pr... 242 1e-62 UniRef50_Q47YE9 Transcriptional regulator, LysR family n=1 Tax=C... 242 1e-62 UniRef50_Q1DCG4 Transcriptional regulator, LysR family n=2 Tax=C... 242 1e-62 UniRef50_P52595 HTH-type transcriptional regulator cbbR n=2 Tax=... 242 1e-62 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 241 2e-62 UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=B... 241 2e-62 UniRef50_C8WTC6 Transcriptional regulator, LysR family n=1 Tax=A... 241 2e-62 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 241 2e-62 UniRef50_A3YG12 Putative transcription regulator protein n=1 Tax... 241 3e-62 UniRef50_A4A328 Transcriptional regulator, lysr family protein n... 240 4e-62 UniRef50_Q3K9A7 LysR-family transcriptional regulator n=4 Tax=Ps... 240 4e-62 UniRef50_B8GUA3 Carbonate dehydratase n=1 Tax=Thioalkalivibrio s... 240 4e-62 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 240 4e-62 UniRef50_A8H0Z4 Transcriptional regulator, LysR family n=6 Tax=G... 240 4e-62 UniRef50_A3Y5Z0 Transcriptional regulator, LysR family protein n... 240 5e-62 UniRef50_A0NTX9 LysR family transcriptional regulatory protein n... 240 5e-62 UniRef50_Q8TVB0 Transcriptional regulator of the LysR family n=1... 240 5e-62 UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=P... 240 6e-62 UniRef50_C8P2K3 Putative uncharacterized protein n=1 Tax=Erysipe... 240 6e-62 UniRef50_Q394R6 Transcriptional regulator, LysR family n=13 Tax=... 239 7e-62 UniRef50_P73778 Transcriptional regulator n=5 Tax=Cyanobacteria ... 239 9e-62 UniRef50_A9KT60 Transcriptional regulator, LysR family n=1 Tax=C... 239 9e-62 UniRef50_Q5NRI0 Transcriptional regulator, LysR family n=1 Tax=Z... 239 9e-62 UniRef50_A9KNS0 Transcriptional regulator, LysR family n=2 Tax=C... 239 1e-61 UniRef50_Q5ZT74 Transcriptional regulator, LysR family n=1 Tax=L... 239 1e-61 UniRef50_C0D9J1 Putative uncharacterized protein n=1 Tax=Clostri... 239 1e-61 UniRef50_A3QF96 Transcriptional regulator, LysR family n=10 Tax=... 239 1e-61 UniRef50_Q1IQA4 Transcriptional regulator, LysR family n=1 Tax=C... 239 1e-61 UniRef50_B0PHZ7 Putative uncharacterized protein n=1 Tax=Anaerot... 238 1e-61 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 238 2e-61 UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=R... 238 2e-61 UniRef50_Q2SMQ7 Transcriptional regulator n=1 Tax=Hahella chejue... 238 2e-61 UniRef50_Q1J2L5 Transcriptional regulator, LysR family n=2 Tax=D... 238 2e-61 UniRef50_A8RZ62 Putative uncharacterized protein n=1 Tax=Clostri... 238 2e-61 UniRef50_A6NX65 Putative uncharacterized protein n=1 Tax=Bactero... 238 2e-61 UniRef50_Q2BLK0 Transcriptional regulator n=1 Tax=Neptuniibacter... 237 2e-61 UniRef50_D1CCM2 Transcriptional regulator, LysR family n=1 Tax=T... 237 3e-61 UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n... 237 3e-61 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 237 3e-61 UniRef50_C0GDQ1 Transcriptional regulator, LysR family n=1 Tax=D... 237 3e-61 UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulat... 237 3e-61 UniRef50_Q0B264 Transcriptional regulator, LysR family n=8 Tax=B... 237 3e-61 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 237 4e-61 UniRef50_A2SKW7 Transcriptional regulator, LysR family n=24 Tax=... 237 4e-61 UniRef50_Q0A8T5 Transcriptional regulator, LysR family n=2 Tax=G... 237 5e-61 UniRef50_A8RJM4 Putative uncharacterized protein n=3 Tax=Clostri... 237 5e-61 UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=C... 236 6e-61 UniRef50_B2JVL8 Transcriptional regulator, LysR family n=1 Tax=B... 236 7e-61 UniRef50_B1ZVT1 Transcriptional regulator, LysR family n=3 Tax=V... 236 7e-61 UniRef50_UPI00017446F7 LysR family transcriptional regulator n=1... 236 8e-61 UniRef50_A0LGP0 Transcriptional regulator, LysR family n=2 Tax=D... 236 8e-61 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 236 8e-61 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 236 9e-61 UniRef50_B6IYM5 RuBisCO operon transcriptional regulator n=1 Tax... 235 1e-60 UniRef50_Q0BTZ4 Transcriptional regulators, LysR family n=1 Tax=... 235 1e-60 UniRef50_Q01QC4 Transcriptional regulator, LysR family n=1 Tax=C... 235 2e-60 UniRef50_P30864 Uncharacterized HTH-type transcriptional regulat... 235 2e-60 UniRef50_Q01QD7 Transcriptional regulator, LysR family n=1 Tax=C... 235 2e-60 UniRef50_B7RLZ1 Transcriptional regulator, LysR family n=1 Tax=R... 235 2e-60 UniRef50_C5AVL3 LysR-type regulator of assimilatory C1 metabolis... 235 2e-60 UniRef50_C0GP88 Transcriptional regulator, LysR family n=2 Tax=D... 235 2e-60 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 235 2e-60 UniRef50_C5CMH8 Transcriptional regulator, LysR family n=2 Tax=c... 235 2e-60 UniRef50_B9YZ26 Transcriptional regulator, LysR family n=2 Tax=C... 235 2e-60 UniRef50_Q3J9W4 Transcriptional regulatory protein, LysR family ... 235 2e-60 UniRef50_C4ZM38 Transcriptional regulator, LysR family n=1 Tax=T... 234 2e-60 UniRef50_A9IDF8 Transcriptional regulator, LysR-family n=11 Tax=... 234 2e-60 UniRef50_UPI0001B4C1F4 LysR family transcriptional regulator n=1... 234 3e-60 UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=G... 234 3e-60 UniRef50_Q2T3T5 Transcriptional regulator, LysR family n=56 Tax=... 234 3e-60 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 234 3e-60 UniRef50_Q4ZRN4 Regulatory protein, LysR:LysR, substrate-binding... 233 5e-60 UniRef50_B2T1K1 Transcriptional regulator, LysR family n=63 Tax=... 233 5e-60 UniRef50_UPI0001788193 transcriptional regulator, LysR family n=... 233 6e-60 UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n... 233 7e-60 UniRef50_Q4ZL95 Regulatory protein, LysR:LysR, substrate-binding... 233 8e-60 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 233 8e-60 UniRef50_C8WRL7 Transcriptional regulator, LysR family n=2 Tax=A... 233 8e-60 UniRef50_Q885P4 Transcriptional regulator, LysR family n=2 Tax=P... 232 9e-60 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 232 9e-60 Sequences not found previously or not previously below threshold: UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=D... 252 8e-66 UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax... 250 5e-65 UniRef50_B6R905 Transcriptional regulator, LysR family n=1 Tax=P... 250 5e-65 UniRef50_Q0AZ61 Transcriptional regulator, LysR family n=1 Tax=S... 249 7e-65 UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=G... 249 8e-65 UniRef50_B2TNN2 LysR-family transcriptional regulator n=4 Tax=Cl... 249 9e-65 UniRef50_C8VX87 Transcriptional regulator, LysR family n=1 Tax=D... 247 3e-64 UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostri... 244 2e-63 UniRef50_A8FFK1 LysR family transcriptional regulator n=1 Tax=Ba... 243 6e-63 UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=C... 243 6e-63 UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=En... 240 4e-62 UniRef50_C5EQQ1 Transcriptional regulator n=2 Tax=Clostridiales ... 239 8e-62 UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostri... 238 2e-61 UniRef50_Q3A916 Transcriptional regulator, LysR family n=1 Tax=C... 238 2e-61 UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n... 237 3e-61 UniRef50_Q1ZDZ8 Transcriptional regulator, LysR family protein n... 237 3e-61 UniRef50_Q3SFM8 Transcriptional regulator n=3 Tax=Proteobacteria... 235 2e-60 UniRef50_Q15ZP2 Transcriptional regulator, LysR family n=2 Tax=A... 234 2e-60 UniRef50_A8HAD2 Transcriptional regulator, LysR family n=2 Tax=S... 234 2e-60 UniRef50_C6NW00 Transcriptional regulator, LysR family n=1 Tax=A... 233 5e-60 UniRef50_B9MIR3 Transcriptional regulator, LysR family n=4 Tax=B... 233 6e-60 UniRef50_B4CZS1 Transcriptional regulator, LysR family n=1 Tax=C... 233 8e-60 >UniRef50_P39376 Uncharacterized HTH-type transcriptional regulator yjiE n=94 Tax=Gammaproteobacteria RepID=YJIE_ECOLI Length = 303 Score = 308 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 303/303 (100%), Positives = 303/303 (100%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR Sbjct: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 Query: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII Sbjct: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 Query: 121 SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS Sbjct: 121 SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD Sbjct: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI Sbjct: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 Query: 301 VLS 303 VLS Sbjct: 301 VLS 303 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 120/296 (40%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F + + ++FS+AA ++SQPA S I+ALE+ G +L +R + L+ Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+I + HLL ++ ++ + + K+ + A+ ++ +LP ++S P Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +E ++ ++ ++++ + D F + ++ L +L V A++ Sbjct: 121 NITMEIMNTEKVLERVSDLTLDLGFV--EGEVTTGELHVEALARDELVVVVAANHPLAGR 178 Query: 188 ---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 PL+ S ++I L +E +K G Sbjct: 179 GRISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEAGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRE 297 G A L ++ +++EI G L + L I + Y N +P + + RE Sbjct: 239 GAAILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHSPATQALIQFCRE 294 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 119/304 (39%), Gaps = 11/304 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 + + F T+ ++FS AA + +SQPA S I+ALE +LF+R + ++ Sbjct: 1 MLLSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTIT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 E G+I + +L ++ ++ + + + I A+ ++ ++P I+ P Sbjct: 61 EAGRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 ++ + ++ V+ + + + D + + + + +L V D Sbjct: 121 QVRALLQVTNTEQIVNLVLKQEIDLGLI--ENQVNKTELVAKPFLQDELIIVIPPDYPLS 178 Query: 186 ALF---NLAQPHFPLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVALD 240 PL+ + S ++ L + + +E +K+ Sbjct: 179 EHQFISMEDLVALPLVMREQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEAVKEAVEA 238 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELRELE 299 G G + ++A+Q+E++ G LV + ++ + + Y Y + V E F L Sbjct: 239 GFGTTIISKWAVQKELKLGTLVPVRFKDISLFRKFYLIYHRDKFQTTVVEEFITFLISFC 298 Query: 300 IVLS 303 ++ Sbjct: 299 SGIT 302 >UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9X7_CLOTS Length = 297 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 123/294 (41%), Gaps = 10/294 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ + L FL++ + + S+AA ++QPA S+ I LE ++LF+R L L+ Sbjct: 1 MDMNFRELNIFLSVCELGSMSEAARHLYMTQPAISQAISELEGEYNIKLFDRIGKKLVLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 G+I + + L LR SD K+K+ A+ ++ LLP +I + Sbjct: 61 HAGEILRDYGKKINLLLNEAENTLRDISDMKMGKLKLGASRTVGTYLLPQLIGEFLKIYK 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + E V + E + D + + + + +L+ +C+ D + Sbjct: 121 NIELPFYIDNTSEIVKMIHENEIDLGIV--EGPIHSDNIEVKYFLDDELYLICSKDHNWA 178 Query: 186 ALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + ++ S + TL H+ + ++ + +E +K+ Sbjct: 179 KKKIINKDDLSLENIIIREVGSGTREVFENTLKAHN-IEYNIKLELNSTEAIKRAVEANL 237 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL 295 G++ + + AI++E++S +LV + D + Q Y + ++ + ++F L Sbjct: 238 GVSVISKLAIKEELKSSRLVKVEIDGVKFLRQLNIIYHKDKYLSELCKKFIDFL 291 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 122/301 (40%), Gaps = 10/301 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ + L F ++ + R+FS+AA +SQPA S +I++LEQ +GV LF R ++L+ Sbjct: 1 MDVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 E G+ LL L+ LA + + ++++AA+ + + ++P + P Sbjct: 61 EAGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 +++ ++ +L G +D ED + + ++L + + H Sbjct: 121 GVELSLDVLNRFAVHQRLLAGDADVAIMGLIED--PQDLEIEQFLPNELVVIASPRHHLA 178 Query: 186 ALFNLAQ---PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + P L S + R LS + +KQ Sbjct: 179 RRHQIPLDEIAREPFLVREIGSGTRADMERIFAEAG-LSPRVAMELRSNGAIKQAVAADL 237 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWRELRELEIV 301 G+A +P AI E+ +G+L+VL+ + R R + A+ W L + + Sbjct: 238 GVAVMPRDAIGLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAAADALWNFLLQYRLQ 297 Query: 302 L 302 Sbjct: 298 A 298 >UniRef50_A4G228 Transcriptional regulatory protein, LysR family n=18 Tax=Betaproteobacteria RepID=A4G228_HERAR Length = 367 Score = 276 bits (707), Expect = 6e-73, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 115/301 (38%), Gaps = 11/301 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 N + L F T+ + +FS+AA +++QPA S +++ LE G+ LF + + L+ Sbjct: 46 KNATLRQLKVFETVARLLSFSRAAEELHLTQPAVSTQVKKLEDHAGLALFEQLGKKIYLT 105 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 G R ++QQ + + K+ +A S P ++ + Sbjct: 106 PGGTELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAVI-SAGDYFFPRLLVEFARSHQ 164 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 T + + + +++L +D ++ + V A D H Sbjct: 165 GVTLNLSVHNREGLLNQLANNLTDLAIMVRPPTDMDT--INEPFAPHPYVIVAAPDHHLV 222 Query: 186 ALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + N+ H P + + S + + +E +KQ + G Sbjct: 223 SKKNIPMSTLIHEPFVVREKGSDTWHSMEDGFGS-RIDDLNIAMEIKSTETIKQAVIAGM 281 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWRELRELEIV 301 GI++L + I E+++G L VL+ + + + Y R N R+ PVA+ F L Sbjct: 282 GISFLSAHTISMELQAGSLTVLDVEGFPVMLNWYVVHRKNKRLPPVAQAFRNFLLNEGPE 341 Query: 302 L 302 L Sbjct: 342 L 342 >UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=Clostridia RepID=B8D275_HALOH Length = 296 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 122/292 (41%), Gaps = 10/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+ + K +N S+AA +SQPA S+ I LE+ + ++LF+R L+L+ Sbjct: 1 MNLRQLKIFVMVCKTKNMSKAAKKLYMSQPAISQTISELEEDLNIKLFDRIKKRLKLTYA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GKI + +L ++ ++ + Q K++I A+ ++ LLP II Sbjct: 61 GKILLRNSKRILNLVDETENIIKDIVNMNQGKLRIGASMTIGTYLLPQIIEGFLNKYNKI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE---HG 184 + D + + + D + + F+ QL+ +C+S H Sbjct: 121 HLPFTIDNTKVIEDMILDNKLDLALV--EGPIYCKDILVEHFFDDQLYLMCSSKHSWSHK 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + + + S I + +HS + + V + E +K+ + G+ Sbjct: 179 RKINSEELKGEDFIIREKGSGTRETIENIMRKHS-IKYHVTHVFNNIEAIKRAIISNLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL 295 + LPE +++E++ G LV ++ + + Y + + + F + Sbjct: 238 SILPEICVKEELKKGLLVKVDIQGIEFKRKFSIIYHKDKYRSQLFNNFVNHI 289 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 123/296 (41%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E L F T+ + ++FS+ + +++QPA S +I+ALE+ +LF+R + L+ Sbjct: 1 MEDHKLKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI---ISQMPPLF 127 G+I + + +L E+ + + +KI A ++ +LP++ + P Sbjct: 61 GEILYKYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + + ++ L D ++ F + +L +C++D Sbjct: 121 RVSVSIGNAKKILEMLNSSMIDFGIISEMPG--KSKFIVDSIISDELCVICSADHPLNNQ 178 Query: 188 FNLAQPH---FPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 +++ P + S +I + L H + + +K+ G Sbjct: 179 KSVSLYDVVKEPFVIREEGSSTRVIIEKFLAEHGLSVSDLHISLILGSTGSIKEAVERGI 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWRELRE 297 G++ + ++AI++E+ G L +L E I Y NT ++P E F L+ Sbjct: 239 GLSIVSKWAIRKEVSCGNLRILKLKEGKITRDFYIILPKNTILSPAVEEFITYLKN 294 >UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=B1KU62_CLOBM Length = 293 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 119/291 (40%), Gaps = 10/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F + + N ++ A +SQPA S+ I LE +GV+LF+R L L+ + Sbjct: 1 MNERKLRIFYEVAEKLNMTEVAEKLYISQPAVSQTILELESELGVKLFDRINRRLYLTNE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F + +R +L + + L+ + K+KI A+ ++ + +LP II + Sbjct: 61 GELFLNYVRRILNMYDDAIRSLKDINSLKTGKLKIGASTTIGIYILPDIIGKFTKQYKGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +I + D + + D F + + + +L + + + Sbjct: 121 DTSIAIENTKLISDMILDNSIDFAFV--EGPVYNEEIIKENFCDDELVFITSPEHPWSNK 178 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ ++ S + +T + ++++ F +E +K+ G G+ Sbjct: 179 DEISITEVDKEKIIMREIGSGTREVFESYMT-ANNVNYNIAFELGNTEAIKKAVEAGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRE 294 + + + I+ EI + L E I + Y + ++ + + F + Sbjct: 238 SCISKRCIKNEINNNTLSWTKLKEFEIKRKLILIYHKDKFLSTLLKTFIKF 288 >UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=Bacillus RepID=A0RKW5_BACAH Length = 306 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 118/303 (38%), Gaps = 14/303 (4%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 ++ GA N++ L F+T+ + ++FS+AA N+SQP S IR LE G L R Sbjct: 2 IEKKGADYMNVDI--LKIFVTVVEQKHFSRAAELLNLSQPGVSMHIRNLENEFGTTLIQR 59 Query: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 +Q++E G I + + +L E ++ + ++I A+ ++ LLP I+ Sbjct: 60 SPKHVQVTEAGNILYIHAKQMLSLYEDAKQKINELHNVVTGTLRIGASFTIGEYLLPKIL 119 Query: 121 SQM---PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV 177 + P + ++ + LR Q D + ++ A D + ++ V Sbjct: 120 ANYANENPHVEVHTFISNTEDVLQSLRSNQIDIGLV--EGQVVYADVDVETFMQDEMKLV 177 Query: 178 CASDEHGEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELL 234 + + + S +R + +H L FF S + + Sbjct: 178 VPPNHPLLRTNEMNESTLQDQVWVLRESGSGTRAYSDRFIHQH-HLKMKRFFTFSSIQSV 236 Query: 235 KQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM--NPVAERFW 292 K+ G GIA L ++ +++E+ + +L + + R + + F Sbjct: 237 KEAVSAGLGIAILSDWTVRKELLAKELFHVEVPNEQLIRPFSIVR-GKYFIPSKAIQVFL 295 Query: 293 REL 295 + Sbjct: 296 NHV 298 >UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5MZU7_CLOK5 Length = 289 Score = 272 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 113/294 (38%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + F+ + N ++AA +SQ A S+ I LE GV LF R L +++ Sbjct: 1 MTLRHFNIFVVVCDKMNMTKAAEQLFISQSAVSQVISELEGHYGVRLFERLSRKLYITQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP---LF 127 G+ S R++++ +++ + I+I A+ ++ +LP +ISQ Sbjct: 61 GEKLLSYARYIIKLNMELENDMKTLGEN--GSIRIGASVTIGAYVLPKLISQFQKVNSET 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + ++ L + + D + + ++ E +L +C S L Sbjct: 119 DIKVYEENTEKVEKMLLQDEIDIALV--EGETTHTDIINVPFMEDELVLICGSGHRFAKL 176 Query: 188 F---NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + R S R + + + L + + + ++ +K +G GI Sbjct: 177 TCIEPYELEKEKFIIRERGSGTRRTFEDKM-KENHLKWQISWTCNNTDTIKIAVSEGLGI 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 + + ++ E+ G L + E+ Q Y N + + + F +R+ Sbjct: 236 SVISRCSVINELVLGTLCEIPVKEIKFKRQFKIIYHKNKYLTEIMKHFIDFIRQ 289 >UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteria RepID=Q7MF54_VIBVY Length = 307 Score = 272 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 113/293 (38%), Gaps = 6/293 (2%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 + + L F+++ +C +FS AA ++++ A S+RI LE +G L NR L L+ Sbjct: 1 MHSQFSDLPIFVSVVECGSFSSAAKQLHLTKSAVSKRINHLEDKLGSRLLNRTTRKLSLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT 128 E G+ ++ L + + + ++KI A + + + +IS+ + Sbjct: 61 EAGERYYEYAAQALNLARQGVDAVTELQGEPRGRLKITAPMTFGVLHVAPLISEFLSRYP 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 + +++ + L G+ D L ++ RL + + D G Sbjct: 121 KVEVDLQLEDQMVDLVAGRFDLGIRIGH--LPDSNLIAKRLAPCRTVLCASPDYVSRMGS 178 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 L YS + ++ F+ + SE +++ L G GIA Sbjct: 179 PSKPADLAQHNCLRYSYFRGGNEWLFLNQGNEYKVLPKGNFIVNNSEAIRRALLAGIGIA 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWRELRE 297 +P + I +E+R KLV L + + YA + P F L E Sbjct: 239 QMPTFIIGKELRDRKLVNLMPEYQLPQHFLYAVFPERKHMPLKVRMFIDFLNE 291 >UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=C6CWT6_PAESJ Length = 302 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 121/295 (41%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ NF++AA + + + +I+ALE+ +GV LF+R L L+ Sbjct: 1 MELRQLNTFCTVATTLNFTRAAEALSYVPSNVTMQIKALEEELGVRLFDRLGKQLALTTA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F + + +L++L+ + + + + I+A + LP + + P Sbjct: 61 GKRFLTHAQGVLEKLDEARSVVHDNAQL-SGTLTISANEVICSYRLPPVFQRFRSQHPGV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ E L EG +D DE + + L E + A D Sbjct: 120 RLIFRSVPNQELKQTLFEGTTDI-VYMLDEPICSSGLVVEPLVEENFRLLAAPDHPLAKR 178 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L F L + + +R+ + S T+ +E +K+ A+ G GI Sbjct: 179 TVLKLEDFHEEVFLTNEKGCPYRTMFDRSFEKEGIDSI-TYLEFQSAEAIKKCAISGIGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWRELREL 298 A+LPE ++ E+ G+LVVL + + + ++P+ F R + Sbjct: 238 AFLPEIVVEAEVERGELVVLPWQIPDLQVYTQMLRHKDKWLSPIMLSFIEATRNV 292 >UniRef50_P96725 Uncharacterized HTH-type transcriptional regulator ywqM n=3 Tax=Bacillus RepID=YWQM_BACSU Length = 293 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 113/294 (38%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L F+T + NF+ A N +Q + + +I++LE+ IG LF R L L+E Sbjct: 1 MELKQLITFITAAEHVNFTLTAKMLNYAQSSVTSQIKSLEEEIGTPLFERLGKRLILTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 GK F S + ++ E + +KI A S LP II + P Sbjct: 61 GKTFKSYAQKIIALTEEAKMATNQVRET-TGTLKIGATESQCTYRLPPIIKEFKQAFPQV 119 Query: 128 TWAIEA-IDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG-- 184 + I ++A ++L +GQ D F + +A L + ++ V A+D Sbjct: 120 KLIFKPYISNEQAKEQLLQGQLDITFILDVNRMEDA-LHVESLIQDEIKMVAANDHPFPA 178 Query: 185 -EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + + LL L L E +KQ + G G Sbjct: 179 DLPVTLKDLQNETLLLTEDGCSYRTLFENNLHDSGIYPNK--LEFVSIEAIKQCVMAGLG 236 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 I LPE ++ +I +G++ LN A+ + M+ + F R+ Sbjct: 237 IGILPEMTVKDDIAAGRMKELNWQSDCPVFTQLAWHKDKWMSAPLKAFIDLTRK 290 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 118/297 (39%), Gaps = 11/297 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 NI + L F ++ + +F++AA ++QPA S +I+ LEQ +G+ LF + + L+ Sbjct: 1 MNITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 E G+ + + +L L ++++ A + + +++ P Sbjct: 61 EAGEEVRRYAQRISAELRELADGLEALRGLNSGRLRLTVAST-ANYFATDLLAAFTRRQP 119 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 T+ +E + + + ++++ + D + L+ + L + A D Sbjct: 120 GVTFQLEVTNREGVIRRIQDNEMDLAVMGRPPEGLD--VAAEAFMPNPLVIIAAPDHPLA 177 Query: 186 ---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + + + S + R L ++ S +E +KQ G Sbjct: 178 DGSPIPLERLQDELFVLREQGSGTRNAVQRVL-EERGMNLRGGLEMSSNEAIKQSVQAGL 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWRELREL 298 G+ + + + E+ G+L VLN + + Q Y R++P AE F + + + Sbjct: 237 GLGVVSIHTVALELELGRLRVLNVEGFPLERQWYLVHRSGKRLSPAAEAFRQFILDE 293 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 112/295 (37%), Gaps = 9/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F+T + S AA +++QPA S++++ALE G+ L R+ ++L+ Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+I + R + L EL + + ++ + A+ + +LP +I P Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D E V +L+EG+ D + RL +L + Sbjct: 121 EVILTIADTQEVVQRLQEGEIDLG-VVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAGA 179 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 + PL+ S R++ L +E + G Sbjct: 180 TAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGL 239 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 GI+ + +A+++ ++ G+L V+ + + Y R ++P AE F + Sbjct: 240 GISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQPLSPAAEAFVNFAAD 294 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 120/302 (39%), Gaps = 11/302 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 + L+ F T+ + +FS AA S +++QPA + ++++LE G +L R + L+ Sbjct: 1 MALNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 E GK R ++ + + + + ++++ A+ ++ +LP ++ P Sbjct: 61 EAGKALMPYARRSIELIRDTDQAMSAFTKQLKGRLQLGASLTIGEYILPRLLGPFGQTFP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + +++ ++ + ++++ Q + + + +L + D Sbjct: 121 EISISMKVMNTAQIIEEIINHQLTFGLI--EAPVNHPDMQMEAVMSDELKLIVPKDHPLS 178 Query: 186 ALF---NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALD 240 +P + + S ++ L R + +K Sbjct: 179 KRQKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAVKSAVEA 238 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWRELRELE 299 G G++++ E +++ E+ G L V+ ++ Q Y+ + + + P A F LRE + Sbjct: 239 GLGVSFVSESSVKHEVALGLLHVIPIEDTRFKRQFYSIYLKSTLLPISAVTFLTFLREKD 298 Query: 300 IV 301 + Sbjct: 299 LQ 300 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 108/293 (36%), Gaps = 10/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + + +F +AA N +Q S RI ALE +GV LF R + L+E Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ L+ + A + G S + + + SL LP +I+ P Sbjct: 61 GERLVQYAAKLIDVEDEARAWVTGESRL-RGLLTVRVPESLCAYRLPPVIAAFRRRHPEV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + A ++ LR+G +D F D + + L L V A A Sbjct: 120 ALHLTACTLNGLEKDLRQGITDLAFVMAD-SVRGGDLNVEALGVEPLVLVAAPHHPLAAR 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L+ + + +I L + + S + L+ G GI Sbjct: 179 DRVVARDLHGITLVLSTTDCAYRTVIEEALAAEG-IQPAAGLEFSSASALRGCVASGVGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN-TRMNPVAERFWRELR 296 LPE A++ E+R+G L L + R ++P + F R Sbjct: 238 TLLPEAAVRDELRAGTLRALAWADQPFETAVLMVRHRGKWVSPYMDTFMELCR 290 >UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=Clostridium RepID=A6LQS5_CLOB8 Length = 324 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 115/291 (39%), Gaps = 10/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L FLT+ K ++F++AA + +Q + + +I+ LE +GV+LF R + L+ + Sbjct: 27 MDFKQLNAFLTISKLQSFTKAADNLGYAQSSITTQIKLLESELGVKLFERIGKNITLTHE 86 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK + +L+ + + +D + I AA SL + LP I+ + P Sbjct: 87 GKKLLPYAKQILKLSSAVKNAVLN-TDVPSGTLTIGAAESLCVLRLPEILKEYKKLYPEV 145 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +++ + E L + D FS + A F + + Sbjct: 146 DISLKFGNCAEFKYFLNDNIIDVAFSLG-VKINSAEFISEIEIPEPMLLLAYPGHPLINK 204 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + PL+ + L + + + + + +KQ + G GI Sbjct: 205 KEVFPKDIESEPLILTEMGCSYRATLENILNSCN-IKPNVAIETGSVQAIKQFTMSGLGI 263 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIP-IQAYAYRMNTRMNPVAERFWRE 294 LP+ A+ EI SGKLV LN I Y N ++P + F Sbjct: 264 TLLPKVAVDDEINSGKLVPLNWKGPDFGIISQVLYHKNKWISPALKEFLNL 314 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 100/292 (34%), Gaps = 12/292 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +L+ F + + +F++AA +QP + +++ LEQ+ G LF R L+L++ Sbjct: 1 MELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ R L++ + + I I +L+ LP + P Sbjct: 61 GEALLPYARELIRLYGESKEVI---KHQTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQV 117 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + E V ++R+G D F D + + E +L V Sbjct: 118 DLVLRTAGEAEIVQQIRDGYLDFGIIF-DRPCTDPELVTHVIREEELVVVMPPAHRFTTA 176 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L PL+ ++ S E +KQ G G+ Sbjct: 177 TALTVHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQ-RIACQFSNPEAIKQCVRCGLGV 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL 295 A LP A+Q+E+ G L + P Y ++P + Sbjct: 236 ALLPVMAVQRELAEGVLTAIPFQSDKPPFSIQLVYHKKKWLSPSMVTLVDTI 287 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 103/281 (36%), Gaps = 10/281 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F + + ++FS+AA +++QPA S I++LE+ G L +R + L+E Sbjct: 1 MLDNQLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ ++ L + + L S + + + A ++ LPSI + P Sbjct: 61 GRVLYNYALELSRLYDEVKKALADISGKVKGNLVVGATLTIGEYFLPSIAGEFKRQYPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + E + + +G+ D + LF+ +L + + Sbjct: 121 EITLRIANTQEIICRTLDGELDLALI--EGQAKHPNLIQEDLFQDELVLIIHPEHRWAGR 178 Query: 188 ---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVALDGC 242 PL+ S ++ L + + ++ +K+ G Sbjct: 179 REITPEELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEAVEAGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR 283 G+A + AI++EIR L + + + + Sbjct: 239 GVAIISRLAIKKEIRYNLLREVRLQGIDFRRTFHIAYNRHK 279 >UniRef50_Q0TQC8 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=Q0TQC8_CLOP1 Length = 294 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 120/297 (40%), Gaps = 10/297 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F KC N ++ A S +SQP+ S+ I LE + V+LF+R L L+ + Sbjct: 1 MNFRKLKIFFETAKCLNMTKVAKSMYISQPSISQAIAELESDLDVKLFDRIGKRLYLTHE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+++ R +L E + +R + + KI I A+ ++ + +LP +I + Sbjct: 61 GEVYFEYSRRILNLYEEANSTIRSSKEGQKGKIVIGASTTIGIYILPELIKEFNELHKNI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---G 184 ++ + + + E + D + + + + + +L + + Sbjct: 121 EISLIIENTQLIEELIMENKVDIALV--EGYVKSDELEVFDIGKDELIFIANPNNPIFSK 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + + S +I L +++ + +E + +V G GI Sbjct: 179 DKITLKDLEDEKFIMREPGSGTREIIENYLINKGC-NYNVYMELGNTEAIVRVVETGLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELRELEI 300 A + AI + I G + + D++ + Y Y + ++ E F +++ +I Sbjct: 238 ACVSCKAIDERINEGLIKEIKIDDIKVSRDLYLIYHKDKFISKNLEIFIDKIKNSDI 294 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 13/297 (4%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + L F + + +F++AA N++QP+ ++++ ALE + V+LF RQ + L+ Sbjct: 10 SMLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLTP 69 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPL 126 G++ + R ++ ++ +R + + H++ L LP +++ P Sbjct: 70 VGELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELLAAYVREHPR 129 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVC----ASDE 182 ++ + E V L G+ D + + + + LFE L V A+D Sbjct: 130 VKINVKTGNNRETVTMLLHGEVDVGLVTTPQ--VHERIEVVPLFEDPLVVVAGPSFAADL 187 Query: 183 HGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + N P + Y R + ++ L + E +K + G Sbjct: 188 PPV-VSNADLAQLPFIGYVRGARFRMTTDQVL-EEMGIQPQFVMEFDNHEAIKTMVALGF 245 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVI--PIQAYAYRMNTRMNPVAERFWRELRE 297 GIA P A+Q+E+ SG+LV LN L + R R + F L + Sbjct: 246 GIALEPVSAVQRELISGQLVRLNVPGLPRLSRTTSLILRRGERRSEAVRAFLSLLEQ 302 >UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q31FC6_THICR Length = 318 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 107/295 (36%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F T+ K +F++AA + +++QPA + +++ LE+ LF+R + L++ Sbjct: 1 MADRRLQVFYTVAKVLSFTKAAETLHMTQPAVTFQVKQLEEFFNTRLFDRTHNKITLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 GKI + +L E +E+R + + I A+ +++ +LPS++ Sbjct: 61 GKIVYDYAEKILDHYEKMNSEVRELTGEVTGSLLIGASTTIAEYMLPSLLGAFKKQFEDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + D V + D + RL ++ + Sbjct: 121 NIRLQVGNTDAIVAMVENNMIDLGVVEAPVYNKNLEVEVCRL--DEMVLIVPHGHPLSNR 178 Query: 188 FNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVALDGC 242 ++ + ++ S +I+ + + E +K Sbjct: 179 DKISIEDMRKYRYISREEGSGSRSVIDNYIREQGLSYSDLNVVMELGSPEAVKMAVESDV 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 G+A + I +E++ G L L D + ++ + + + + Sbjct: 239 GLAIVSRTTISKELKLGTLKALPLDPPLNRPFSHVRQKHKFRHRAVGELLDFAVD 293 >UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n=4 Tax=Bacillus RepID=C3BJ72_9BACI Length = 298 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 112/294 (38%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + F++A +Q + IR+LE+ IG LF+R + L++ Sbjct: 1 MELRHLKTFIIVAESGGFTRAGEQLGYTQSTITNHIRSLEEEIGNPLFDRLGKKVILTDV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ S +L+ L + I+I A SL + LP+++ + P Sbjct: 61 GEHMLSYAHKILELSNEALES-SQMNGKFSGTIRIGANESLMIYRLPAVLYEFKRKYPQV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + E ++L+ G+ D H E L L + ++ + Sbjct: 120 HIILQPSESQELHNELKSGKFDFALFTHPEQL-GTDIVTHSLVQEKIVLIAPPKHPLTKK 178 Query: 188 ---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 LL SY L+ R + F E +KQ + G GI Sbjct: 179 VSVSPADLEGEMLLLTEPGSY-RDLLERRIKEDGINCSHIHF--WSIEAIKQTVMCGLGI 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDEL-VIPIQAYAYRMNTRMNPVAERFWRELRE 297 ++LP +++EI GKL VL AY + + P ++ + + Sbjct: 236 SYLPFITVKEEIEQGKLSVLPWTYSKDFVTTELAYHKSKWLTPAMKKLIEMIEK 289 >UniRef50_A5N491 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N491_CLOK5 Length = 301 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 76/304 (25%), Positives = 123/304 (40%), Gaps = 14/304 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L F+T+ K NF +A N SQ + S IR+LE+ +G +LF R + L+E Sbjct: 1 MDIKQLQTFITVAKLLNFREAGEELNYSQSSVSDHIRSLEKELGTKLFERLGRKVFLNEN 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK S ++Q E + L ++ ++I AA +LS+ LP I+ + P Sbjct: 61 GKKLISLAEKIIQD-EKEIQGLFNKNEKISGLLRIGAAETLSVFWLPPILKEYRIIYPDV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D E L D FS HD+ I + + V A D L Sbjct: 120 KVTLRMDDCVEFPKMLSHNMIDVAFSLHDQS-QHEYISQINILKDSTVFVAAPDHPLVNL 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + + + L + + + T S E +KQ G GI Sbjct: 179 NRIKIHELENQSFILPEAECCYRVELEELL-KENGIKIDTIMELSSLEAIKQCVKIGLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL----RELE 299 + LP+ A+Q+EI G+L +L + I I A Y ++P + +E E Sbjct: 238 SLLPKIAVQREINKGELAILTIENCDISICAKMIYHKQKWISPPLNALKNMICTNNKEEE 297 Query: 300 IVLS 303 +S Sbjct: 298 HKIS 301 >UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=Firmicutes RepID=B8G0Z2_DESHD Length = 303 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 113/294 (38%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F + + ++FS+AA +SQPA S IR LE G +L R + L+ Sbjct: 1 MIIETLEIFRKVAEEKSFSKAAEDLFLSQPAVSSHIRNLENEFGTKLIYRSSKHVDLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLF 127 G+I + Q ++ Q + ++ ++I A+ ++ +LP ++ ++ P Sbjct: 61 GEILYEQACRIINQYQEAKEKINQIQSIVSGNLRIGASFTIGEYILPELVSQTARRYPNL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA- 186 + + +E LR+ + D + + F ++ + Sbjct: 121 NINVTIGNTEEIAQGLRQNRLDVALV--EGKITGKEFILEPFMVDEMVLIALPSHPLAKI 178 Query: 187 --LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + S +R ++ + S + +K L G GI Sbjct: 179 KGVTAQDLEDQVWILRETGSGTREFSDR-FIETLKIPVKHSYGFSSNTGVKAAVLSGLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDE--LVIPIQAYAYR-MNTRMNPVAERFWREL 295 A + + IQ+EI++G++ ++ +E + + R T +E F EL Sbjct: 238 ALVSKLIIQKEIKAGEIAIIPLEENLPRLSREFLIARGQQTYFTKASEAFLMEL 291 >UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A0L4T1_MAGSM Length = 307 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 104/291 (35%), Gaps = 11/291 (3%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 L F + K +F++AA ++QPA + +IR LE+ LF+R + L+E G + Sbjct: 8 LRVFYAVAKHLSFTRAAEELYLTQPAVTFQIRQLEEHFDTRLFDRHHNRISLTEAGLEVY 67 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTWAIE 132 S +L + + + +K+ A+ ++ LLP I+S + Sbjct: 68 SYAERILDLYRETEKAVSELTGVTRGVVKVGASTTIGEYLLPRILSDYRDQFNDVQIRLS 127 Query: 133 AIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNL-- 190 + V KL + D + + + +L + + L + Sbjct: 128 IDNTRTVVRKLEDATIDVGMI--EGPVKNKNIARDGCLDDELVVILPPNHPLCDLDEIPV 185 Query: 191 -AQPHFPLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVALDGCGIAWL 247 +P ++ S ++++ L +E +K G GI + Sbjct: 186 KELKAYPFVSREEGSGTRQVVHDHLLHAGLPYDQLDIVLELGSTEAVKGSVEGGIGIGIV 245 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 ++ +E++ G LV + I + ++ + E F ++ Sbjct: 246 SSASLIKELKLGILVAKRVQGMRITRTINFIHQKQKFRSKAVEAFINFAKD 296 >UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVL6_9BACL Length = 302 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 120/295 (40%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E++ L+ FL + + +F++AA + +Q + + +I+ALE IG+ LF+R + L++ Sbjct: 1 MESRHLFTFLVVVEAGSFTRAAQQLDYAQSSVTAQIQALEAEIGLPLFDRIGRKIVLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ + + + E L ++ +KI A SL+ LP +I PL Sbjct: 61 GRRLLPYAQEIAKIHEMAKNALHPAAEM-AGSLKIGAPESLAAFRLPEVIRHYRQRYPLV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 ++ E D +R G+ D F ++ + L + V +D Sbjct: 120 QIVLKPGQCWELRDLVRSGELDVAFLLQP-EVEDRDLQIETLVHEPMALVAPADHPLRHE 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + +L+ L R L H E +KQ + G G+ Sbjct: 179 AEVVPDQLKDQTILHTESGCSYRTLFERYLNSHGVF-PDPNLEFWSIEAIKQCVMSGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWRELREL 298 ++LP ++ E+ GKLV LN ++ + A +P E+F +RE Sbjct: 238 SFLPLVTVRSELAEGKLVKLNWNDESQRVATQLALHRKKWRSPALEQFVLMIREQ 292 >UniRef50_B7JB31 Rubisco operon transcriptional regulator n=5 Tax=Acidithiobacillus RepID=B7JB31_ACIF2 Length = 332 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 115/298 (38%), Gaps = 11/298 (3%) Query: 5 GAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTP 64 G + + L F + + +F++AA +++ PA S ++R L +A+G LFN+ Sbjct: 24 GMSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFNQIGKK 83 Query: 65 LQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM- 123 + L+ G+ S +L +LE E+ + +K+A + + +P I+ Sbjct: 84 IYLTPAGEALTSACHDVLDRLEYFTQEIAALQGLEKGSLKVATLST-AKYFIPRIMGGFC 142 Query: 124 --PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD 181 P A+ + + +++L Q D + ++ L V SD Sbjct: 143 TEHPGVATALFIGNREALLERLARNQDDLYILGQPPE--HINVVAEAFADNPLVVVSRSD 200 Query: 182 EHGEALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 + +L P + S + +H + T +E +KQ Sbjct: 201 HPLASEKDLEPSRLRDAPFILREPGSGTRLAAEKFFEQHGVV-LRTRMEFGSNEAVKQTV 259 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 G GIA L I E+ SG+LV+L+ + + YA ++P+ F L Sbjct: 260 AGGLGIAVLSASTIHAELASGELVILDVRGFPLERKWYAVYPAGKLLSPIVRAFMGCL 317 >UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=Bacillales RepID=C9RY94_GEOSY Length = 304 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 123/300 (41%), Gaps = 11/300 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + LY F+ + + NF++AA +++QPA S+ I+ LE+ +L R ++L++ Sbjct: 1 MD-QLLYVFVKVVEKGNFTKAAEELHMTQPAVSQHIQTLERLFDTKLLYRTNKYVKLNKA 59 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTW- 129 G+I + + +L L + A ++ I A+++ +LP +I+++ + Sbjct: 60 GEIVYHYAKEILGLYTRMNQLLDDLMNRASGELSIGASYTYGEYVLPQMIAKLHQHYPLI 119 Query: 130 --AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 I + +E V+ +R Q D + D+ + Q+ V ++ Sbjct: 120 KPTITIGNSNEIVEMVRGHQLDVGII--EMDIEPKNVYIEPFAQDQMVVVASAHHPYAQK 177 Query: 186 -ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + + S + + +H+ S+ ++L+K+ G G+ Sbjct: 178 ETVQMEDLRNATWIVRETGSGTRKATDEFFLKHNFF-PSSIMEFGSTQLIKEAVEAGLGL 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWRELRELEIVLS 303 +L + I++E+ G L ++ ++ T E F +R + +S Sbjct: 237 TFLSLWTIKKELSFGTLKIIPINDEPFFRHFSLVTPKTPFYTKAMELFLTIVRTHQPSIS 296 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 126/294 (42%), Gaps = 11/294 (3%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 +IE + L FL + K +F++AA N+SQP+ S++IRALE +G+ LF+R + L+E Sbjct: 8 SIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLTE 67 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPL 126 G++ S + + ++E + ++ + + I + ++ LLP I P Sbjct: 68 AGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYPN 127 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 ++ + E +KL + + D +F + + I L++S+L V + Sbjct: 128 IELSVLGLRTGEIREKLLQNELDIGITFLP--VQDKEIVSIPLYKSELTLVVPTSHSLTE 185 Query: 187 LF---NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 +PL+ +N Y+ LI ++ S E L Q+ G G Sbjct: 186 RKYVSIEELQDYPLILLPKNFYLTELITSH-CQNFNFKPKPILEISTMESLIQMVAQGMG 244 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 I LP+ I +++ + + + I YR + M +F +L+ Sbjct: 245 ITVLPKPYI-DFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFIEQLK 297 >UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=Bacillaceae RepID=B7GI02_ANOFW Length = 304 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 110/298 (36%), Gaps = 10/298 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 + +L+ F + K +F++A+ +Q + + +I+ LE+ V LF R ++L+ Sbjct: 6 RRMNLHYLHTFREVAKWNSFTKASEMLGYAQSSVTTQIKKLEEEFDVVLFERWGGKIKLT 65 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 + G ++ ++ L + I S++ LP + Sbjct: 66 DAGAELLEYANKIISLIDEAKQNLSE-QTELAGSLSIGTIESVAGFYLPPYLQAFKQKHS 124 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 ++ + V ++EG+ D DE + + I + + L V D Sbjct: 125 KVNLLLQQNICNRLVKGVKEGKYDLAI-ILDEKREDPDLNVIVIKQEPLVLVAKPDHRLT 183 Query: 186 ALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 L + L+ + +I L R+ + F E +K+ G Sbjct: 184 RLDKIDIHALGDEKLIVTEQGCSYREVIGN-LYRNYNIRFEYTIELGSIEAIKRCVAYGL 242 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELE 299 GIA+LP A++ E+ G+LV + E I + Y ++ ++ L + E Sbjct: 243 GIAFLPLMAVEAELEKGRLVRVPIPEAEIHLFLQLVYHRKKWLSQSLKQLINLLVDRE 300 >UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HY10_9BACT Length = 303 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 124/301 (41%), Gaps = 11/301 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L FL + + ++F+QA ++QPA S ++++LE+ + V LF R + L+E Sbjct: 1 MTNDQLKVFLKVAEYQSFTQAGEVLFLTQPAVSLQVKSLEKDLKVSLFERTGKKILLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP---LF 127 G+ R ++QQ+E +R D Q ++I A+ ++ LLP +++Q Sbjct: 61 GRKLLPLARSIIQQMEEAREVVRPLEDMPQGHLRIGASMTIGTYLLPPLLAQFLRANSRI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEA-PFDHIRLFESQLFPVCASDEHGE- 185 T ++ + + + L+ + D + + D L +L + + + Sbjct: 121 TASLAVANTHQILHDLKASEIDLGLIEGEPTRTQGISLDRKFLDHDRLVLIDSLNHPLLP 180 Query: 186 ---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALD 240 + A P + S ++I R L + F T E +K++ Sbjct: 181 SSGPVSLDALRKVPFIGREPGSGTRQVIERELLEKNLPPDSFETVMTVDNPEAIKELVAL 240 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 G G+A++ ++ SG L + ++ + + + +P A+ F + L + + Sbjct: 241 GSGVAFISSLCLRPH-ESGLLRTVAVEDFSPVRNLWIFVPQKKTSPPADLFLQLLVKERL 299 Query: 301 V 301 Sbjct: 300 P 300 >UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=Gammaproteobacteria RepID=C6C726_DICDC Length = 335 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 105/294 (35%), Gaps = 9/294 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 N + L F+ + + +FS A N+S+ A S+R+ LE+ +GV L +R L L+ Sbjct: 1 MN-DFSSLPVFVAVVESGSFSAAGKRLNLSKSAVSKRLSQLEERLGVRLLHRTTRQLSLT 59 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT 128 E G ++ + LQ + + + Q ++++A + L + ++ + Sbjct: 60 EAGSDYYDYAQRALQLAQQAEDAVTQLQERPQGTLRVSAPMAFGLRHISPLLPIFLHRYP 119 Query: 129 -WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHG 184 +++ + D VD + EG D L ++ RL A D Sbjct: 120 EVSVDLLMDDRVVDLVGEG-FDLAVRI--GQLPDSSLIARRLAPCFSVLCAAPDYLQRTD 176 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 A H L Y + ++ SE L L G GI Sbjct: 177 VPQHIDALKHHNCLFYLYFKGGVEWSFEGPDGPVRFQPHGNYRANNSEALFDALLAGVGI 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELRE 297 +P++ + + G+LV + + YA R P F L + Sbjct: 237 CQVPKFIVGPALSEGRLVEVLPQYRLPEHSIYAVYPERRHLPAKVRVFIDFLSQ 290 >UniRef50_Q06610 RuBisCO operon transcriptional regulator n=4 Tax=Proteobacteria RepID=RBCR_THIFE Length = 309 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 111/297 (37%), Gaps = 11/297 (3%) Query: 6 AILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPL 65 + + L F + + +F++AA +++ PA S ++R L +A+G LF++ + Sbjct: 1 MSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFDQIGKKI 60 Query: 66 QLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM-- 123 L+ G+ S +L +LE E+ + +K+A + + +P ++ Sbjct: 61 YLTAAGEALTSACHDILDRLEYFTQEIAALQGLEKGSLKVATLST-TKYFIPRMLGGFCT 119 Query: 124 -PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE 182 P + + + +++L Q D + ++ L V D Sbjct: 120 EHPGVATVLFIGNREVLLERLARNQDDLYILGQPPE--HMNVVAEAFADNPLVVVARLDH 177 Query: 183 HGEALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 ++ P + S + +H + T +E +KQ Sbjct: 178 PLTQEKDIEPSRLRDVPFILREPGSGTRLAAEKFFEQHGVI-LKTRMEFGSNEAVKQSVA 236 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 G GI L I+ E+ SGKL +L+ + + YA R++P + F L Sbjct: 237 GGLGITVLSASTIRAELASGKLAILDVRGFPLERKWYAVYPAGKRISPRTKAFMEYL 293 >UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65FY0_BACLD Length = 297 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 108/292 (36%), Gaps = 10/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ F++AA +Q + ++A+EQ + LF R + L+E Sbjct: 1 MEIRHLKTFKTIVDIGGFTRAADYLGYAQSTVTSHVQAIEQELRKPLFYRLGKKMMLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK +++ E + + I A+ SL++ LP+I+ + P Sbjct: 61 GKHLLPYAAEMVELYEKARH-IPENDQEPSGNLIIGASESLTVYRLPAILHEFTSKYPQV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 T +++ + D+L++G+ D F D D E +L + + + Sbjct: 120 TVTLKSSTCWQLRDELKQGKIDVAF-LLDNDRKENDLHVEKLVNEPMVFIFPKEHPAGQK 178 Query: 188 FNLAQ---PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L L + ++ T E +KQ + G G+ Sbjct: 179 ALDDLTFNANETFLYTEHGCSYRDFFEEYLRQRGVIADHT-MEFWSVEAIKQCVMCGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 + LP + +I GKL + + Q Y N ++P F +R Sbjct: 238 SLLPLITTRTDIEEGKLQGTLVRDALFSTQ-MVYHKNKWLSPAMAAFTDIVR 288 >UniRef50_Q3AEF0 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEF0_CARHZ Length = 301 Score = 262 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 123/294 (41%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F + + + S+AA ++SQPA S +I ALE + V+L R ++L+E Sbjct: 1 MNLNQLEAFCNIVEQGSISKAAKLMHLSQPALSTQIAALENQLQVKLMERTNRGIELTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF--- 127 G+ + + +++ E+ + + ++ I AA ++ LP I + Sbjct: 61 GETLLYYAKRICNLVKNLNEEIERLKNLEEEELSIGAASTIGGYALPCSIYIFQEKYESA 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHG 184 + ++ ++ ++ L + Q D + ++ F L +L V ++ ++ Sbjct: 121 RIKLTIMNTEKVIEALLDRQIDIGLV--ESNIESNEFISSHLTYDELVLVVPNNNSYKNK 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 E L P + + S + + I + L + + + +K G Sbjct: 179 EILTLDELRTLPFIIREKGSGIRQTIEKALAEKGLNISDLNIVMEVNSIDAIKVAVESGK 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWREL 295 G++ LP +A+++E+R+G L + ++ + A N + + + ++F + Sbjct: 239 GVSLLPRFAVKKELRTGSLKSIKVKDISLLHPFVAITLKNKKRSLLEKKFLAFI 292 >UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS6_DESAS Length = 300 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 116/299 (38%), Gaps = 13/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + +L F+T+ + + S+AA + N++QPA S++I +LE G++L R + +E Sbjct: 1 MNFNFLQTFVTVIEFNSISKAAKALNITQPAVSKQIASLEDHFGIKLLERLGRKMVPTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G + + +L L+ E+ + + I A+ +LP II P Sbjct: 61 GNRLNRHAKIILNSLQQAEKEINEMISEVRGNLVIGASTIPGQYILPKIIGLFKKQYPQV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +E D + ++KL E + +L I+L + +L + + Sbjct: 121 KTVLEISDSGKVIEKLLEHEIHLGAIGT--KVLHDKIASIKLSDDELVLITPLEHPFATR 178 Query: 188 ---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFS---TFFVSSMSELLKQVALDG 241 + ++ +S + LT L+ + +E + G Sbjct: 179 KTVKAVELAGEQMVWRESDSGTRHAVEEKLT-AKGLNVNNLIITAEFGSTESIIGAVEAG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWRELRELE 299 GI+++ +A+ + + VL +++V+ Y N AE F L +L+ Sbjct: 238 MGISFVSHWAVPENEYRRNIAVLRLEDIVLDRNLYIIYPKRKYFNRTAETFINFLHQLD 296 >UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPK4_9CLOT Length = 301 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 121/294 (41%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+ + + + ++A+ +VSQP+ S I+ LE + LF+R L ++EQ Sbjct: 1 MTIRHLRTFVIVFQKESITKASEILHVSQPSVSLAIQELENYYHIRLFDRIGKRLSITEQ 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK + H++ + E++ ++ + ++I ++ ++ +LP +I + Sbjct: 61 GKWLYDYALHIVSMFDEMETEVKTWNN--KGTLRIGSSITIGNFILPQLIEEFQKRYREV 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 + + + + D + L E L +CA++ Sbjct: 119 EIKVSVCNTKTIEQYILNNEVDLALI--EGKTEYEQIQMEHLMEDPLCLICAANSELVKQ 176 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 E + + +P++ R S + +I +L H ++ + S ++ + + GI Sbjct: 177 EKISLIDLERYPMILRERGSAVREMIEESLGYH-QIHHRVIWESVSTQAIIRAVAKKLGI 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 + LP ++ E+ G + L +E + Q AY + P A+ F +E Sbjct: 236 SILPYLLVRDELARGLVKQLQVEEFHLSRQFSIAYHKKKYLTPAAKGFMELCKE 289 >UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio RepID=Q30Z73_DESDG Length = 319 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 114/298 (38%), Gaps = 10/298 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + I+ + L F + + R+FS+A +SQP S + ALE+ + V L +R + Sbjct: 21 IDMIDFRRLEAFCKVYELRSFSRAGDELFLSQPTISAHVSALEKELDVRLLDRMGRGVLP 80 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP--- 124 + G+I + LE+ E+ D ++ + A+ + LLP +++ Sbjct: 81 TPAGEILYRHAMTAFASLETAHLEISQLQDIITGEVPVGASTIPAQYLLPPVMAAYMRSF 140 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P + D E + K+ G+ + + + + +L + A D Sbjct: 141 PEVQLQLRTGDTGEIIRKVGAGELTLGVVGAHDQ--QPDIVFTPIIDDELIIIGAPDFAP 198 Query: 185 E--ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVALD 240 ++ + P + S ++ + L H SF S+ + Q Sbjct: 199 RSGSVSCESLADMPWVVREAGSGTWKIFSAALGTHGIDCRSFRPVACVDSSQSVIQCVRA 258 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELRE 297 G G++ A+ + + G+LV + D L + + + Y ++ P A F L + Sbjct: 259 GLGVSVTSRIAVAEFLSRGELVEITVDGLDVRREFFCIYHSRRQLFPAARHFIEFLTK 316 >UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2L1_PELTS Length = 303 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 112/294 (38%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L FL + + ++F++AA +SQPA S +I+ALE+ + V LF R + L+E Sbjct: 1 MNLKQLEAFLLVAELQSFTKAARQLYMSQPAVSFQIKALEEDLQVALFQRGDKKVILTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + + + +L+ + L D + + + A+ LLP +I + P Sbjct: 61 GRLLYPEAKQMLKHYQKIKVGLDDLRDLKKGHLVVGASTIPGEYLLPLLIGKFKEKYPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + +RE + D + + + + QL + +L Sbjct: 121 KITLKVSGSGQVGQWVREREIDLGITG--AFIEGESLECRPWIDDQLVLIVNPSHRWASL 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 + + P++ +S R I + L + + + G Sbjct: 179 GAVQASELKNEPMIMREHDSGTRRTIEKKLKECNLSLEKIPQGMELGSTRAVITAVEAGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWREL 295 G++ + YA ++ + G++ + L + Y R + F + Sbjct: 239 GVSIVSRYAAREALELGRVKEVQVTGLNMNRSLYQVRHKQGIEGFAIRAFTEFI 292 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 116/294 (39%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+ + + + ++AA S ++SQPA S IR LE G+ LF+R L L+E Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G S H+++ + +L+ ++I ++ S +LP ++ + P Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDS--AGTLRIGSSISTGTQMLPQLVRRFNLRFPQI 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + DK+ Q D + + + +L + A Sbjct: 119 RTQVLIDNSRIIEDKVLTNQLDLALV--ESLSYSPDIVCVPFYTDRLIVITAPKHPLTQN 176 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 A +P+L S +++ L +E+ + + S+ + + + GI Sbjct: 177 PECTVKALADYPVLLREPGSGTREVVDALLV-TAEVQITPLWESTSTRSIINAVKENIGI 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRELRE 297 + LP ++ EI+SG + L + + + N + P A+ F +E Sbjct: 236 SILPYELVKNEIQSGAVAGLPLASPLPNRTCSIIHHRNKYLTPSAQAFIEVCQE 289 >UniRef50_B2A0Q8 Transcriptional regulator, LysR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0Q8_NATTJ Length = 300 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 121/307 (39%), Gaps = 24/307 (7%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F+T+ + NFS+AA ++QP S + +LE+ G++LF R+ L+E Sbjct: 1 MDFRQLEVFVTIVEEGNFSKAAKRLYLTQPTVSAHVDSLERECGMKLFERRNRQAVLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F+ LL E + KI I A+ + + LLP++++ P Sbjct: 61 GQNFYPYAVDLLDMKERAHESFARFNQEIDGKITINASQTPGIYLLPNLLAPYQKKYPRS 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ I D D + + ++D F + L QL + D + Sbjct: 121 SFRITISDTDGVFENILNYEADLGFVGSPKT--SDKLVAKPLINDQLVLIA--DSPFKEK 176 Query: 188 FNL-----------AQPHFPLLNYSRNSYMGRLINRTLTRH--SELSFSTFFVSSMSELL 234 + P + + S ++ +TL S + E + Sbjct: 177 LDEQQKKQGVLYMKDLLDLPFIIRTEGSATRKVFEKTLAEQEKSIKNLQIAGQVDNLEGV 236 Query: 235 KQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWR 293 K G G++++ ++++ ++ L +L+ + Y Y + +P ERF Sbjct: 237 KSFVHQGVGVSFVSKFSLNRDT---SLKSFYIQDLMPERKFYLIYHKDRVFSPTCERFIA 293 Query: 294 ELRELEI 300 +++ +I Sbjct: 294 HVQDQKI 300 >UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1VNR0_POLNA Length = 305 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 111/300 (37%), Gaps = 11/300 (3%) Query: 6 AILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPL 65 ++ K + F+ + + R+ S+AA V+QPA S +IR LE A G+ L + Sbjct: 1 MVMRPYTLKQMQTFVEVARQRSVSKAAERLFVTQPAVSMQIRQLEDAFGLPLIEPLGRNI 60 Query: 66 QLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM-- 123 QL+ G+ F L Q + A + + +I +A + + +P ++ + Sbjct: 61 QLTHAGEAFLGHAIAALGQFKDLEALMAEHVGMKKGRIDLAVVST-AKYFVPMLLVRFRK 119 Query: 124 -PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE 182 P + + + + + ++D + L+ + + L V A D Sbjct: 120 LHPGIDIQLRIDNRENILGMMARYEADLVVMGRAPGNLD--CEATPFATNPLSIVAAPDH 177 Query: 183 HGEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 L A + + S + R + +E +KQ + Sbjct: 178 ALVRRKTLPFSALGEHGFVVREQGSGTRAAMERLFADQKT-PLNVVMEMPSNETIKQAVM 236 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELREL 298 G G+++L ++ E+ G + +++ + + Y +++P A F L E Sbjct: 237 AGMGLSFLSRRTMRHELAHGYIALVDIEGTPLVGNWYITHLSQKKLSPAALAFKEFLVEQ 296 >UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2B6_DESAS Length = 291 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 132/294 (44%), Gaps = 8/294 (2%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + +I +L F ++ + ++S+A N+SQPA SR+I +LE+ +G++LF ++ + L Sbjct: 1 MTDIIFNYLRVFHSVARHLSYSKAGEELNLSQPAVSRQISSLEKGLGLDLFTQRGRKVVL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP--- 124 ++ G+ + ++ + L D + ++++ + L LLPSI+ + Sbjct: 61 TDAGRSLYDYADRIMGLAQQAGRTLAQYHDLERGEVRLGVSPVLGCYLLPSILKEFYTRF 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P +++ + + ++ +G+ D L R + L VC E Sbjct: 121 PNIKVSLQLDSGQKLIKRIEDGKLDLALVVGP--LESDRIHLERYTQDALVLVCPPGED- 177 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +FN ++PL+ + S I L ++ ++ +E++K++ + G G+ Sbjct: 178 SPMFNEIFINYPLITREKPSSTRITIEDHLAKY-DIRPKLIMEIPDNEVIKRLVITGIGV 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRE 297 A+LP+ A++ E+ SG L V+ + + Y + P F +R+ Sbjct: 237 AFLPKRAVETELVSGALQVVKGEGTALTRWVYLVTAKDQHHCPTLLAFMNFMRK 290 >UniRef50_A7UH62 Putative LysR family regulator n=1 Tax=Desulfotignum phosphitoxidans RepID=A7UH62_9DELT Length = 313 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 119/304 (39%), Gaps = 10/304 (3%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 MDD + ++ L F LEK + S+ A ++QPA S+ I+ALE GV LF+R Sbjct: 1 MDDSNSKYSDMNVYQLRTFCVLEKKGSVSRTAQELYLTQPAVSQHIKALESFYGVGLFDR 60 Query: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 L L+E GK + + + + S+ + I I A++++ + +LPSI+ Sbjct: 61 VDKKLVLTEAGKTLYHYTGLIFNLINETKRAISDFSELKRGSICIGASNNIGVYVLPSIL 120 Query: 121 SQMP---PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV 177 + P + KL + D + + + +L + Sbjct: 121 GEFKNGFPQINIQVSIDTTRVIEQKLLSNEIDIGIV--EAQVRSSDLVLEHWGAEKLILI 178 Query: 178 CASDEHGEALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELL 234 ++ L ++ P + R S R++ + + + + +E + Sbjct: 179 TSAMHPWTQLKSIKPDMLLDEPFIVGGRGSGTRRVLEEKM-PNVMKKMNVYLELGSTEGV 237 Query: 235 KQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWR 293 K+ + GI+ E + +E++SG+L + D + + Y + ++F Sbjct: 238 KRAVEENLGISICGENTVSRELKSGQLKAIKIDGIELKKNFSIVYLKGKVITLAMKKFLG 297 Query: 294 ELRE 297 L + Sbjct: 298 SLHD 301 >UniRef50_Q0I520 Transcription regulator, LysR family n=3 Tax=Pasteurellaceae RepID=Q0I520_HAES1 Length = 309 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 118/295 (40%), Gaps = 8/295 (2%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ L F+ L +C N ++ A +QP+ S +I+ LE+++ LF R L L+E Sbjct: 15 DMNLSQLKAFIVLSECLNVTETANKLFCTQPSVSIKIKKLEESLNTVLFERINNRLYLTE 74 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PL 126 QGKIF + + +L LE+++ L D KI I A+H + + LLP II++ P Sbjct: 75 QGKIFQNYAKQILSTLETSIEHLHQYDDPNYGKITIGASHFVGVYLLPKIIAEYKKISPN 134 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 +I+ + + + KL Q D + + R +L + + Sbjct: 135 VKLSIDILPSPQLIHKLENHQIDFLIMSDQIYFDPQTYQTHRFLSDELILIASPKNPLAK 194 Query: 187 LFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 L+ S + I + + E +K ++ G Sbjct: 195 KTACDFTALSQQQLIMKPNLSETRKFIFQHFNHEQITQLKI-MEFNSLEGIKHCVINNLG 253 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 ++++ A+ E+ S LV + L Y + + ++P +RF+ L Sbjct: 254 VSFISRLAVTHELNSQLLVEIPLKNLTFERGINYIFYKDKFISPAIQRFFSLLHN 308 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 112/295 (37%), Gaps = 11/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F + + +F++AA + ++QP S +RALE+ +G +L +R + + Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GKI + R ++Q + + L + I A+ +LP +I P Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D E V + +G + L + F +L D Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGVIG--ARLEDRRIVLEEAFSDELVLAVFRDHPWAVR 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 +++ P + R S ++N+ L H + +E ++Q G Sbjct: 179 KSVSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAIRQGIKAGI 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWRELR 296 GI+ L A+ +++R G L + + + R N +M+P+ F LR Sbjct: 239 GISILSHRAVAEDLRHGSLFAVPLAGIRFSRPFFLVQRKNRQMSPLCSAFLNHLR 293 >UniRef50_B3DZ70 Transcriptional regulator, LysR/CysB family n=5 Tax=Verrucomicrobia RepID=B3DZ70_METI4 Length = 309 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 120/299 (40%), Gaps = 10/299 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F L + R+FS+AA +SQ A S++IR+LE+ GV L R +QL+++ Sbjct: 1 MQIETLKAFRDLVESRSFSKAAQLNKISQSAVSQQIRSLEERFGVPLIERGSRKVQLTKE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+I + R ++ A++ I+++A +S+ L LP + + P Sbjct: 61 GEILYHAAREIVDIYTRIEAKITEIKASVSGNIRVSAIYSVGLHELPYYLKKFLKLYPEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +E + + EG SD + + ++ +C+ L Sbjct: 121 NIRVEYRHSRQVYQDIIEGNSDIGIVAYPS--PRKLIKIEPFRKDRMVVICSPTHRFSQL 178 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + +S + R +++ R L F E +K+ G+ Sbjct: 179 KEVGLEEIAREGFIAFSSDMPTRRELDKLF-RDRGLEFRPVMEFDNVETVKRAVEIDAGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELEIVL 302 A +P I QEIR+G L +L Y+ + P +F L++ E+ + Sbjct: 238 AIVPMATITQEIRNGTLKMLELSGPPCYRPIGILYKSGRMLTPAMRKFIEILQKEEVPI 296 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 115/294 (39%), Gaps = 11/294 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ + L F + + ++++AA ++SQPA S ++R LE IG+ LF R + L+ Sbjct: 1 MHVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 E G+ R + Q L L ++ ++IA A ++ P +++ Sbjct: 61 EAGREVFHYSRAIGQSLREMEEVLESLKGVSRGSLRIAVASTV-NYFAPRLMAIFQQRHS 119 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 ++ + + V L D + +E + ++ L + D Sbjct: 120 GIGLRLDVTNRESLVQMLDSNSVDLVLMGVPPRNVE--VEAEAFMDNPLVVIAPPDHPLA 177 Query: 186 ALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 ++ + S + + R + + + + +E +KQ G Sbjct: 178 GERAISLARLAEETFVMREEGSGTRQAMERFFSERGQ-TIRHGMQMTRNEAVKQAVRSGL 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWREL 295 G++ + + I+ E+ + +LV L+ + Q Y YR R++P A F + Sbjct: 237 GLSVVSLHTIELELETRRLVTLDVEGFPDRRQWYLVYRRGKRLSPAAGAFREFV 290 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 109/287 (37%), Gaps = 9/287 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L ++ + + +F++AA +SQ A SR ++ LE+ +G L R+ + + Sbjct: 17 LNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTMA 76 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G I R + + L + ++ I A+ ++ + LLP ++ P Sbjct: 77 GTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTIGIYLLPPLLGNYHRRYPGI 136 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + + +++L Q D + + ++ + + D Sbjct: 137 ELFLDIGNTQQIIERLLSYQIDVAYVEGPVA-ANEDLQVVPWRSDEMVVIASPDHPLTRR 195 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L P + S +++ + L H+ ++ +E +KQ G G+ Sbjct: 196 VTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHN-VTVRPVMELGSTEAVKQAVSAGLGL 254 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAER 290 + + + IQ E+ +GKL VLN L I Q + + E Sbjct: 255 SMVSRFTIQSELIAGKLRVLNIPGLNIQRQLSRVRLHDRPQSLALEA 301 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 120/296 (40%), Gaps = 14/296 (4%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 ++ +++T L FL + + +FS AA ++QPA S+RI ALEQ + LF+R + Sbjct: 1 MITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVA 60 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--- 123 L+E G+ + + +L + +R S +++A +H + L LP I+ + Sbjct: 61 LTEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGLHHLPPILREFAAN 120 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 + +D ++A +K+ G D L E + L+ L + ++ Sbjct: 121 HKQVNLQFDFLDSEQAHEKVLRGDCDLAVVTLAPTL-EENLEASVLWPDPLCFIVGANHP 179 Query: 184 GEALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 N++ P + N+Y GRL+ L+ + ++ E +K + Sbjct: 180 LATSKNISLEELSRTPAILPDLNTYTGRLVKHFFDTQG-LALNLNMATNYLETIKMMVTV 238 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL 295 G G + LP+ + L +L + + Q + A F+ L Sbjct: 239 GLGWSVLPKTMVDS-----SLKILPIKNIQLERQLGVVIHKKRTLGNAARAFFEVL 289 >UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RPQ8_9CLOT Length = 296 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 114/295 (38%), Gaps = 14/295 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+T+ + + + AA ++QP+ S I +E GV+LF+R L L+E Sbjct: 1 MTFRHLKIFVTVCETGSMTAAASQLFIAQPSISLAISEMEDYYGVKLFDRISRKLYLTEN 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ RH++ L+ +R ++K+ + ++ LLP I ++ P Sbjct: 61 GRRALQYARHIIDLLDEMEQGVRDVDAM--GRLKVGTSITIGTYLLPGYIKKLKQQYPAL 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFD-HIRLFESQLFPVCASDEHGEA 186 + ++ + D E + +PF +L +C + Sbjct: 119 KVEASIANSGTIEQQILDNDIDVGII---EGVAHSPFILSESFAGDRLVFICPAGHEFAG 175 Query: 187 LFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + + S + + L EL+ + S+ ++++ Q G G Sbjct: 176 KTLEELSEVRNQDFILREKGSAGREIFDGILAAQ-ELNVRPIWQSASNQVILQGVKAGLG 234 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 I+ LP + ++Q+IR G+L +L + + Y N + A +E Sbjct: 235 ISILPYFLVRQDIREGELAEFRIKDLALNRKYSVIYHKNKFLPRSARTLMELCKE 289 >UniRef50_Q5WD37 LysR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WD37_BACSK Length = 290 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 112/293 (38%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ F +AA S +Q + + I+ LE +G LF+R + L++ Sbjct: 1 MELRHLNTFKTIVDTGGFKKAADSLGYAQSSVTNHIKELENELGYLLFDRLGKQVVLTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F ++ + + D ++ I + SL L LP+ I+ P Sbjct: 61 GKRFLPYALEIIDLYAKSKEAVLNTVDL-AGELTIGVSESLLLYWLPTFITNFTKTYPKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ ID +L++G+ + ++ L V +D + Sbjct: 120 ELTLKLIDYQHLTTQLKKGEIEAAILVESNQWQPKALSFEKISSDTLILVETADHAFRNI 179 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 +L +I + L+ ++ E +K+ G G ++L Sbjct: 180 PE------TMLVTEYACSWRPIIEQYLSEEAQFGMK-KIEFPSIEAIKKCVECGLGQSFL 232 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELRELE 299 P++A++ + G L + + PI Y AY N ++ E F LRE + Sbjct: 233 PQFAVRDALAEGTLKEVPTKAPIEPIGIYAAYHKNKWVSRKLETFISALREQK 285 >UniRef50_C8W3M6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3M6_DESAS Length = 293 Score = 257 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 117/295 (39%), Gaps = 12/295 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+T+ K +F++AA + +Q + + ++ ALE + +LF R + L++ Sbjct: 1 MEIRQLKAFVTVAKQHSFTRAAELLDYAQSSITAQVSALENKLNTKLFERLGRQVTLTQN 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ +L+ + + S + + + A + + LP ++ + P Sbjct: 61 GEKLLPYAEKILKLNSEAIELVSS-SPVPRGSLSVGAMETSCIYRLPKLLQEYRKLFPNV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 + +E + L+E + D F F +++ L + + V A+ Sbjct: 120 DLTLVNGYPEELIHSLKENKIDVAF-FTGQEITNPDLVSETLLDEPIVLVSAAGHPLSKK 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L ++ S R R + + + + + E+ K+ ++G GI Sbjct: 179 APVITLDLQGETIVL---CSCCYRATLRKIFENKGIQVGSILKFANIEVRKRCVINGLGI 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIP-IQAYAYRMNTRMNPVAERFWRELREL 298 LP ++ E+ G LV L + I AY + ++PV F E+ Sbjct: 236 TILPRVTVEAELNQGTLVDLGWNSSDFNIITQVAYHKDKWVSPVLRSFLELAHEI 290 >UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RA29_AMMDK Length = 295 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 106/297 (35%), Gaps = 11/297 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ WL F+ + +FS AA +++QPA S+ I LE +GV+L +R + L+E Sbjct: 1 MKLSWLKTFVLIADKGSFSLAAKELDLTQPAVSKHIALLEAHLGVKLIDRDQRQVTLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ R +++ LE +R S + + I A+ +LP +I + P Sbjct: 61 GQALLPYARTIIKTLEEAEQAVRNLSASVRGTLNIGASTIPGHYVLPQLIRRFRERYPQV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +E D ++ ++ E + + + ++ V + Sbjct: 121 QVNLEIADTEKVWQQVLEHKICLGAVGAPPS--SPALEAVPFATDEIVLVLPTPHPLAGK 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 + P L+ + S + + L + S +E + G Sbjct: 179 EVIPLELLPQLELVGREKGSGTRQTVEERLRQKGFPPERLRVVAEFSTTEAVLAAVEAGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWRELREL 298 G A++ +A + G L + + + + Y R P +A F Sbjct: 239 GGAFVSRWAAESRRHKGNLCICRLEGISFERKLYLVYSRHRTLPHLARLFLNFATNQ 295 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 117/293 (39%), Gaps = 11/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + +L + + + R+FS+AA +SQPA S++++A+E+ L R + +E Sbjct: 1 MLLSYLRVYCDIIETRSFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+IF+ R ++++ ++ ++ S I++A +++ L LP I + P Sbjct: 61 GRIFYEAAREIVERYQALEQQMANLSQSVSGTIRVATVYTVGLHDLPPYIKKFIQTYPQA 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 +E ++ + +R+ Q D + ++ I L +L + + + Sbjct: 121 RIHLEYSRTNKIYEAVRQNQVDIGIVAYPQE--GRQLGVIPLPSDELVVIVSPNHPLARA 178 Query: 186 --ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + P + + + + +R L H + E +K+ G Sbjct: 179 GKPVALQQLHRLPFIAFDPDIPTRKATDRVLNDHG-VDVEIIHEFDNVETIKRSVEAELG 237 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN-TRMNPVAERFWREL 295 ++ +P Q E+RSG LV L ++ I + ++F L Sbjct: 238 VSIIPRRCAQWEVRSGSLVALPIADMRIERPVGVIYKRGKNFSNTLQKFIAIL 290 >UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGB6_BREBN Length = 298 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 111/287 (38%), Gaps = 10/287 (3%) Query: 16 LYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFH 75 + F + KC++F++AA +Q + + +I+ LE GV LF R ++L+ G++ Sbjct: 1 MQTFREVAKCQSFTRAAEVLGYAQSSVTTQIQNLESEFGVSLFERWGKKIRLTHAGEVLL 60 Query: 76 SQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTWAIE 132 L L+ A L ++I SL+ LP + + P + Sbjct: 61 GYSEQLQAVLDEAKANLSE-QAQLAGTLRIGTVESLAAFYLPPYLQKFRLEQPRMRIMLA 119 Query: 133 AIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQ 192 + ++EG+ D F D ++ +++ L E +L V A + Sbjct: 120 PGICQDLRQGVKEGKFDFAFVL-DWLQDQSELENVVLGEEKLVVVAAPTHPLVKKEKVET 178 Query: 193 PHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPE 249 F + + ++ L + + F E +KQ GIA LP+ Sbjct: 179 HDFTGETWIFTEKGCSYRGMMESVLREAG-ATVESSFEFGSLEAIKQCVAYDLGIALLPK 237 Query: 250 YAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWREL 295 +Q+E+++G LV+L+ I + + Y M RF L Sbjct: 238 IVVQEEVKNGTLVILSFSHPDIRVFRQLVYHKKKWMPQALLRFLELL 284 >UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX23_9PROT Length = 303 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 120/302 (39%), Gaps = 11/302 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + + L F + + +F++AA + +++QPA S +++ LE+ +G LF + + L Sbjct: 1 MIKATLQQLRLFEAVARFGSFTRAAEAIHLTQPAISIQVKRLEETLGAPLFEQMGKKIYL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 + GK ++ RH+ L + +L + +AA + + LP + Sbjct: 61 TAAGKELYATCRHVFDSLGTFEGKLDELRGEVAGPLNLAAVTT-AKYFLPHYLGAFLRRY 119 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P ++ + +++ + D + ++ + + +L Sbjct: 120 PKVLPQLKVSNRARITERMEANEDDIYILATLPERID--IEVHPFLKDELVVFAHPKHPL 177 Query: 185 E---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 + +++ S + R L ++ + E +KQ + G Sbjct: 178 ANKKKIPPELLLGERIISREAGSGIRMTFERLLAERG-VTLEPYMELGSGEAIKQAVMSG 236 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN-TRMNPVAERFWRELRELEI 300 GIA L ++++ E+ +G+LVVL+ + + I YA + P A +F L+ +I Sbjct: 237 IGIATLSTFSLKLELETGRLVVLDVEGMPIRRNWYAVHRRGKHLTPSALKFIEFLQTADI 296 Query: 301 VL 302 + Sbjct: 297 SV 298 >UniRef50_B6ITN2 Transcriptional regulator, LysR family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6ITN2_RHOCS Length = 311 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 118/294 (40%), Gaps = 12/294 (4%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ L F + + R+F++AA +S+ A SRRI LE +G LF+R + L++ Sbjct: 1 MDRLDDLRLFTCVAETRSFTRAAERMGLSKSAASRRIAELEARLGARLFHRTTRSISLTQ 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 G+ FH ++ +L LE + + +K+AA S L L I F Sbjct: 61 VGQGFHERVSQILADLEEAEGLVASQHAAPRGVLKLAAPMSFGLLHLGPAICAFQERFPE 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 ++ D VD + EG D L ++ R+ ++ V + GE Sbjct: 121 VQVDVDLSDRFVDLVDEGY-DLAVRI--GRLKDSSLIARRICPARRVAVASPAYLQRRGE 177 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSEL---SFSTFFVSSMSELLKQVALDGC 242 A L+YS S R L + ++ ++L+ A+ G Sbjct: 178 PATPDALAEHDCLHYSNASVADHWSFRAAPGSEMLRPARPAVTMRANNGDILRTAAVAGR 237 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 GIA LP + + ++ +G+L + D V P +A N ++P F + Sbjct: 238 GIAVLPTFIVGDDLAAGRLRAVLLDWTVSPSALHAVYPANRHLSPKVRAFVDFI 291 >UniRef50_A5N2N1 Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5N2N1_CLOK5 Length = 298 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 104/291 (35%), Gaps = 10/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + +++S+AA +Q + +I+ LEQ + ++LF R ++L+ + Sbjct: 1 MELRNLITFCKITHLKSYSKAAKELGYAQSTITTQIQLLEQELNIKLFERIGRSIKLTSK 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G IF ++++ + +D ++I SL LP ++ P Sbjct: 61 GLIFLKYAQNIVNLAHEAKEAIND-TDIPTGTLRIGTVESLCTMKLPELLRNYHKKYPDV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 I+ + D L+ D IF D ++++ + + + + Sbjct: 120 EIIIKLGICSDLRDMLKNNIVDLIFILDDP-VMDSDLISCMSYNEPMAVLASPLNKLAYK 178 Query: 186 -ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L PL+ + LS E +K + GI Sbjct: 179 NNLTIEDIKDEPLILTESGCSYRNAFEKIFHESG-LSPHLSLEVGNVEAIKNFTMSNLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIP-IQAYAYRMNTRMNPVAERFWRE 294 LP +++E+ L++L+ + + Y N + + F + Sbjct: 238 TLLPVMTVKKELAKKNLILLDLEGCEFNMMTQMLYHKNKWITAAMKTFIQM 288 >UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=A0LJJ0_SYNFM Length = 308 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 122/300 (40%), Gaps = 10/300 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + +F++AA + +Q + S +I+ LE+ +GV+LF+R +QL+E Sbjct: 1 MELRQLKTFRVVANLLSFNKAAGQLHYAQSSISAQIQILEEELGVQLFDRLGKRVQLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G +L ++ + + + + I +L + LP+++ + P Sbjct: 61 GVRLLQYANKILDLVDETNSMVNRV-NEPTGSLTIRIPETLGVRRLPAVLREFHSRFPRV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ LR+G +D F E + A D L + V A D A Sbjct: 120 RLNFITCALEGLDKDLRKGITDLAF-LLAESINAADLDMATLGFEPVVLVAAPDHPLAAK 178 Query: 188 ---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +L + +++ + L + F+ F S E++K + G GI Sbjct: 179 RKVHTRDLTGSTILLSRVDCSYRKVLEQILEQEEVTRFN-RFEFSSVEVIKHCVMAGVGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELRELEIVLS 303 + LP A+ +++ ++VVL E I + + ++P + F +++ + Sbjct: 238 SVLPSIAVAEDVARKRMVVLPWSEGGIQVAVLMVWYRERWISPTLQAFMDVTKKVFAQAA 297 >UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J6T9_DESRM Length = 299 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 116/301 (38%), Gaps = 11/301 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F+ + + +N S AA +++QPA S+++ LE G L R+ + L+ Sbjct: 1 MNLSTLQTFIVVAEKKNLSLAAQEIHITQPAISKQLSVLEAYFGTALVERKGRGVSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F+ R +L+QL E+R S + ++ + A+ +LP II P Sbjct: 61 GELFYRHAREMLEQLNKAEREIRQMSGEIRGRMILWASTIPGHYILPPIIGTFKKEYPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ D EA+ KL E + + + I+ F +L + +D L Sbjct: 121 QTVLQIGDSKEAIRKLLEESAHLAAVGILPN--NKRIEGIKFFSDELVVIAPTDHPFAEL 178 Query: 188 FNLA---QPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 + PL+ S ++ LT+ + + + G Sbjct: 179 NEVPIEKLAKEPLVWRELGSGTRSVVETFLTKGGLSTDKLNIALELGSTGAIVTAVEAGA 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELRELEIV 301 G++ + +A +E K+ L +L + + + +P+ + F + + Sbjct: 239 GVSVVSRWATLKEQALNKIATLKIKDLPMQRDLFLVYPRRKNRSPMIDAFIKYALKQNPP 298 Query: 302 L 302 + Sbjct: 299 I 299 >UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9N7_9FIRM Length = 291 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 117/294 (39%), Gaps = 10/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + FL + + +FS+AA SQ A S ++ LE + LF+R ++L++ Sbjct: 1 MELRTINTFLHIAELHSFSRAARELGYSQSAVSAQVAQLEAELETPLFDRVGKTVRLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ F + R LL E A L+ +++A A S+ LP ++ + P Sbjct: 61 GQTFLTYARSLLATAEQAKAALQPARQ-VSGTLRVALADSVCSTFLPDLLQRYHALCPQV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + DE + L Q D ++ D+ LL+ F + V + Sbjct: 120 ELVLRTATDDEMLQMLGSNQIDLAYTL-DKPLLQPSFVLAVDEPEPICVVAPAGHPLAGQ 178 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L R +++ + L+ F + LL Q+ G G+ Sbjct: 179 AEVTLQELAGQEFLLTERGMSYRDALDQCMAAQG-LAIKPFLELGSASLLCQMVEHGMGL 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIP-IQAYAYRMNTRMNPVAERFWRELRE 297 ++LPEY +Q + +G L LN + + Y + + P + F +++ Sbjct: 238 SFLPEYIVQNALAAGTLARLNVPACRVEMRRQLFYHRDKWLTPQMKAFITLVQK 291 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 117/293 (39%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F+ + K +NF++AA + +++QPA S ++ LEQ + + LFNRQ + L+ + Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+IF + +L L + E+ ++ ++++ +S P II P Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + +G+ D + R ++ D Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVV--AGGNFPETLEVRRFLREEIVICVPPDHPFAQR 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +++ F PL+ Y Y+ L + + F +++ L+K + +G GI Sbjct: 179 KSVSLVEFIREPLVFYKEGYYIREFFLEVLKGAGS-APNIVFETNLFSLVKSLVRNGTGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 + + + LV + D + A++ +T ++ F L + Sbjct: 238 SIFLRMVVAADTD---LVAVPFDPPLHLDLLIAWKKDTYLSLANRAFVDFLLQ 287 >UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPG0_PSEMY Length = 294 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 11/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L FL + + + S A ++SQPA +R IR LE + + LF+R +QL+E Sbjct: 1 MNLHHLKVFLAVAEAGSISAGAERLHISQPAVTREIRELEANLDLRLFDRLPRGVQLTEG 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ R + ++ +LR + Q ++ + A+ +L LLP +IS+ P Sbjct: 61 GQRLLDYARRIFALEQAAERDLRDFAQLEQGELHLGASATLGAYLLPPLISRFRALHPQI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 ++E + + +L +G+ F + +A +DH L L PV A Sbjct: 121 FVSLEVSNTEAVTRQLDDGRISLGFV--EGPFAQADYDHRLLARDALLPVVAPRHPLART 178 Query: 185 -EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 L +PL S + H L +E LK++ DG G Sbjct: 179 AAPLQASELQAYPLYMREPGSGARASVEHAYRVHG-LEPRAGMAIGSTEALKRLLADGQG 237 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRE 294 IAWL + +++E+ SG+L L +L I + + +R ++P F Sbjct: 238 IAWLSQRVVERELASGELQRLTVQDLQIERELHVLWRPGASLSPAPAAFLAL 289 >UniRef50_B5HHH0 YwqM n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HHH0_STRPR Length = 297 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 109/299 (36%), Gaps = 13/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + +F+QAA +Q + + ++R+LE ++G ELF+R + ++L+E Sbjct: 1 MEIRLLVTFEKVAAHLSFTQAAAELKYAQSSVTSQVRSLESSLGTELFDRLGSRIRLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ R +++ E A + +D I I SL+ LP ++ P Sbjct: 61 GERLVPYARRIIELSEEARAAVAE-TDEPAGTINIGTMESLTSYRLPELLELFHHRYPRI 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 ++ DE LR+G D F + + L L V A Sbjct: 120 KLSLRPTLGDETRRALRQGVYDIGF-LMERETEHTGLRSEVLAPEPLVLVAAPGHPLAGA 178 Query: 186 -ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L L+ L L + F E K+ G G+ Sbjct: 179 GGLTTPDLADAQLVGTEPGCPYRDLFENELRERTGAPP-PFMEFGTIEATKRGVAAGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR----ELRELE 299 A LP ++ E+ SG LV L + A+R R+ F +RE E Sbjct: 238 ALLPRMTVRAELASGVLVALPWEPPFRLHTQVAWREGKRLPRHVRLFIDETVRLVREQE 296 >UniRef50_D2M0Y8 Transcriptional regulator, LysR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M0Y8_BACS4 Length = 296 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 114/293 (38%), Gaps = 9/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E L F + NFS+AA VSQPA SR+I ALE+ G+ LF R ++L+ Sbjct: 1 MELHQLRSFYYVATYLNFSRAAEKLLVSQPAVSRQIEALERLYGLPLFYRSKKKVELTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ + + ++ E L + ++ + ++ + +++ P Sbjct: 61 GRELLTYAKKMMTLAEDAKEALLTLKNGDSGELHVGCGTTIGNFAITALVVHFQKKYPNI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE---HG 184 ++ + D ++KL E + D +D+ F+ LF+ + VC ++E + Sbjct: 121 HIHLDIDNTDTIINKLNERKLDVAII--AKDVDREAFNVDSLFQDNIHLVCLAEEMQKYK 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ + + R S+ ++ + + +E +KQ + G+ Sbjct: 179 QSQSLDQLENETYILRKRGSHTRECVDEYF-KTMNFQPQNIIEVNNNEAIKQAVIQKLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 +L + E L + + ++ Y + V E F L++ Sbjct: 238 GFLSSITYKIEREHQILRQIRLQKPSKREFSFIYPKGKYYSTVMEMFHTFLKD 290 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 105/296 (35%), Gaps = 10/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F + K +F++AA ++QP+ + RI+ALE+ +G +LF R+ ++L++ Sbjct: 1 MDVQGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ +LQ ++ + + + + +A + S LLP I+ + P Sbjct: 61 GRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + + A L E + V D Sbjct: 121 EVLVHTGRSHQVQQLVLDDTVQVGLVHAPLP-SHAEIVSYPLSEEPILLVVPPDHPVARH 179 Query: 188 FN---LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + R S L+ + + E K++ L G G+ Sbjct: 180 SEVTLDELTQESFITTDRASGYWALVEQWWASQGFV-PHITMELDSIEAAKRMVLCGLGL 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVI--PIQAYAYRMNTRMNPVAERFWRELREL 298 LP ++ EI ++V + +R + A+ F R L E+ Sbjct: 239 TMLPYSTVKSEIELSQVVAVPLANSATLKRQNILIHRRGKIWSGTAKAFLRVLEEM 294 >UniRef50_A9KJB0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=A9KJB0_CLOPH Length = 300 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 118/295 (40%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + F+ + +NFS+AA SQ + +I+ LE+ +G +LF R + L+EQ Sbjct: 1 MEIRNIKTFIKVAATQNFSKAAEQLGYSQSTITIQIQQLEKELGTQLFERIGKQVSLTEQ 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G++F + +++ A + + ++I + SL+ +LP ++ + P Sbjct: 61 GEVFLNHANEIMRVTNEA-AVFARETSTPEGTLRIGSVESLATAILPELLLRFHNACPKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 I+ D ++ +R + D F D+ + + + E + V +S Sbjct: 120 ETIIKTDMSDGLINMVRNNEIDL-FLTLDQKIYGSEWVRAVQQEEDIIFVTSSKHSFSGK 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 E + + P L + + R L+ + +E + + G G+ Sbjct: 179 EKINIETLQNEPFLLTEKGVSYRYELERILSEKEIV-IKPVLEIGNTETIIHLLEHGMGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWRELREL 298 ++LP +++ + I G L + D + + Y N + F +E Sbjct: 238 SFLPMFSVSKSIERGILTQIQADFPAVHMYSQLLYHKNKWITSQMNTFITIAQEF 292 >UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RPQ0_9PROT Length = 303 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 108/298 (36%), Gaps = 11/298 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + N + L F +F++AA +++ A S +I+ LE G LF R + L Sbjct: 1 MRNATIRQLQIFSVAASHLSFARAAEKLHLTHAAISLQIKQLEDVSGALLFERIGKRVFL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP--- 124 +E G+I R +LQ L+ L +I +A A + + P ++++ Sbjct: 61 TEAGEILLDHTRQILQSLKEADEALLALKGLRGGRIAVAVAST-AEYFAPGLLAEFRKVQ 119 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + + D L + D L+A + L V ++ Sbjct: 120 ADVRIRLLIDNRDTVTRLLVGNEVDLAIMGRPPAELDA--TAVAFAPHPLVIVASAAHPL 177 Query: 185 EALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 N+ L+ S + + + +E +KQ + G Sbjct: 178 AGQANVAVEDLAGETLIVRETGSGTRSAMEEFF-QERSIKPRIGMEMGSNEAIKQAVVAG 236 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELREL 298 GI+++ ++ + E+ + +LV+L + + + + R N + P FW + E Sbjct: 237 LGISFISQHTLGLELSAARLVILKVEGTPVIRRWHIVRHKNKHLTPALGAFWDFVLEF 294 >UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F0J2_9FIRM Length = 297 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 120/297 (40%), Gaps = 11/297 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + F+ + + N ++AA ++QP S I+ +E+ G F R L ++E+ Sbjct: 1 MSIRHFRIFIAVAEEENITKAAKKLYLTQPTVSVAIKEIEEHYGARFFERINQRLHITEE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F +H + + + ++++ A+ ++ +P +I + P Sbjct: 61 GKRFLDYAKHFIAMYDEMEIAFKNTD--FTGRLRVGASVNIGTYYIPRLIREFRDRYPGI 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH--GE 185 ++ +L +G+ D + LF + +CA + G+ Sbjct: 119 NVQVKINTTAVVEKELLDGKLDLALVG--GTIQSEHIVAEPLFYEKYTAICAPEHPMAGK 176 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + PLL+ ++S + ++ + L+ + + S+ L + G G+ Sbjct: 177 TVPLEEFMKEPLLSREKSSGAYE-VFQSAVNQTGLTVTPVWESTSQTTLMEAVHYGLGVT 235 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELRELEIV 301 +PE I++E+R G+L + + + AY + ++P ++F ++ L+ Sbjct: 236 IVPEQMIKREVREGRLSQITFSDFSFQNTIHIAYHHSKYLSPSIKKFILLVKTLDPP 292 >UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=Bacteria RepID=B9ZSB8_9GAMM Length = 340 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 116/303 (38%), Gaps = 10/303 (3%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 ++ + + L F + + +F++AA +++QP S +I+ L A+G+ LF Sbjct: 25 LIRHATLRQLQVFEAIVRLGSFTRAAEELHLTQPTVSIQIKKLSTALGLPLFEYVGRKAF 84 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--- 123 +E G + + R +L L + +L + ++++A + + PSI+ Q Sbjct: 85 PTEVGLLLYDTCREMLGALTNLEMKLAEMHGLKRGRLRLAVITT-AQYFAPSILGQFARR 143 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 P ++E + D +++L D H + L + L + + D Sbjct: 144 YPDIELSLEVSNFDRVLERLSNNDDDLYIIGHVPERL-TDVAVHPFAPNPLVVMASRDHP 202 Query: 184 GEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 N+ L S + + H +S +E +KQ + Sbjct: 203 LVGRRNIPLKELEQETFLMREPGSGIREATLKLFQEHG-ISPPVRMELGSNEAIKQAVIG 261 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELRELE 299 G GIA L + + E G + +L+ + I Q + + ++ VA+ F + E Sbjct: 262 GLGIAVLSLHTLSAEGAEGPVALLDVEHFPIHRQWHIVYPKKKVLSVVAQTFLDFAIQDE 321 Query: 300 IVL 302 + Sbjct: 322 ARV 324 >UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV81_ALIAD Length = 305 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 111/300 (37%), Gaps = 9/300 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + ++ L F+T+ + +F++AA ++SQPA S+ ++ LEQ +GV L +R LQ+ Sbjct: 1 MKRVDL-QLRVFVTVVEENSFTRAAEKLHISQPAISQHVQTLEQRLGVRLIDRGRRRLQV 59 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 + G+I + + +L + + + + A+ + +LP +I++ Sbjct: 60 NPAGRIVYEHAKEILALYRRMERLIADMQEMPAGPVHVGASLTYGEYVLPHVIARFRKAY 119 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P ++ + + Q D +D++E E ++ V + Sbjct: 120 PAVQPSVSIANTQTIAHAVAVRQLDIGIV-EGQDVVEDEVVLTPFAEDEMLVVASPASPW 178 Query: 185 EALFNLA--QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 A S + +R T+ + + S+++K+ G Sbjct: 179 YAEAPDRSLLERATWFIREPGSGTREMTDRLFTQLG-IQPRDLVEYTSSQVIKESVAAGL 237 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELEIV 301 G+A L + + +E+ G L L + + ++ + L E Sbjct: 238 GLACLSRWVVARELAWGMLRTLPIPCAPVKRTFSIVTPKSAFETKASKLLYSFLMEHGSP 297 >UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I114_DESAP Length = 296 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 115/295 (38%), Gaps = 11/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + +L F+ + K ++FS+AA + +++QPA S+ I LE G +L NR ++L++ Sbjct: 1 MNLSYLETFVMVAKHKSFSRAAKTLSLTQPAVSKHISLLEAHYGTKLVNRTSRRVELTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G + + ++ +E E+ S+ + ++ I A+ +LP I+S PL Sbjct: 61 GIVLYHFAGRIIATMERAKEEIVSFSEEVKGRLSIGASTIPGHYILPRILSDFKKEYPLV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++E + + +++L+E + + ++ + D Sbjct: 121 NVSLEVSNTGKVINRLQEEAIQVGVIGAP--VDSPEINCTEFSSDEVVLIMPRDHPLVFR 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRH--SELSFSTFFVSSMSELLKQVALDGC 242 L ++ +S R++ L S +E + G Sbjct: 179 KELVTDDLVGEKVVVRENDSGTRRIVEEKLAAADIPLDSLQIAGEFGSTEAVLAAVEAGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELR 296 GI+++ +A ++ G++V+ +L Y + ++ F ++ Sbjct: 239 GISFVSRWAAEKVALEGRIVMRTLQDLRFSRSLYIIYLRDRSLSRPTHAFLSFIK 293 >UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B1Y5W5_LEPCP Length = 316 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 115/298 (38%), Gaps = 12/298 (4%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + + + L F + + +F +AA + +++ PA + +++ LE AI + LF+R+ + L Sbjct: 1 MKTVTFRQLRVFTEVARHLSFVRAAEALHLTPPAVTMQVKELESAIELPLFDREGRKVSL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 + G+ F + LL L+ + + + + + +P ++++ Sbjct: 61 TTAGEYFLVYAKRLLSTLKEADDAMARFRKVESGVLSVGMVGT-AKYFVPQLLARFRIEH 119 Query: 125 PLFTWAIEAI-DVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 P ++ + ++ V L++G+ D + + Sbjct: 120 PGIELKLQVGANREQLVALLQQGEVDLAIMGRPPREMATR--AEPFAAHPHVFIAPPGHP 177 Query: 184 GEAL---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 A +PL+ S L++R H + +E +KQ + Sbjct: 178 VLAQGRTTLSELASYPLIAREPASGTRALMDRFFQEH-RVELRIAMEMPSNETIKQAVMA 236 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELRE 297 G G+++L + I E+R G L +++ + I M +R ++P AE + E Sbjct: 237 GMGLSFLSLHTIGLELRCGLLELVHVENAPIVRTWNIVHMQSRLLSPAAEALRYFMLE 294 >UniRef50_C6Q178 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q178_9CLOT Length = 303 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 12/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L FL + + NF AA N SQ S IR LEQ + V+LF R + L+EQ Sbjct: 1 MYIRQLQTFLVVARLLNFRAAAEELNYSQSTVSDHIRNLEQELDVKLFERFGRKVFLNEQ 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ S + +++ E + +L + + +KI +A +L + LP ++ + P Sbjct: 61 GEKLISPAKKMIKDAEE-IHKLFDNDEKIKGTLKIGSAETLCVFWLPPLLKEYSKIYPDV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ D E + L + D FS HDE + I LF+ V A + ++ Sbjct: 120 QIILKMADCLELPEMLEKNIIDAAFSLHDES-AQQQLSQIDLFQDSTIFVAAPNHPLTSV 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + + + L + + +T S E +KQ +G GI Sbjct: 179 KKITAYELENQAFILTESKRGY-SFELKKLLENLNIKTNTIMELSSLEAIKQCVKNGLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERF--WRELRELEI 300 LP + +E+++G+LV+L + I IQA Y M+P LR+ EI Sbjct: 238 TLLPRIVVDKELQNGELVILPVEINQILIQAKMIYHREKWMSPPLLALKNIVLLRKDEI 296 >UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=Alphaproteobacteria RepID=A7IBY1_XANP2 Length = 313 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 107/293 (36%), Gaps = 11/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+ + + + +Q A N++Q A S I ALE +LF+R + L+E Sbjct: 1 MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G++F S+ + +L ++ + L +D + + IAA+ +++ LP I + P Sbjct: 61 GRLFLSEAKAVLARVHAAEKVLTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + D ++ EG +D + ++ + E +L V D Sbjct: 121 AITLTIDNTDGVARRINEGLADLGLV--EGEIDDPSVSVAPFAEDELVLVVPPDHAWAHD 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALDGC 242 P + S + TL++ + +E ++ G Sbjct: 179 PRRQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEAGA 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G+ + + +++G LV + D L M F + Sbjct: 239 GVTVVSGLVVSNALKAGSLVQVKLD-LPKRRFFALRHKEFSMTRAQRAFLDLI 290 >UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI63_DESAA Length = 304 Score = 252 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 105/294 (35%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L+ F + + +FS+AA + N+SQP S I+ LE + L +R ++ Sbjct: 1 MDLWQLHIFTKVVELGSFSKAAQAVNLSQPTVSSHIKDLEDHLNCRLIDRLGRKASPTKG 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ +S LL + + + + IA ++ +LP +I P Sbjct: 61 GELLYSFATRLLALRDEAQSAMSSFLGKPTGSLAIAGSNIPGCYVLPKVIGAFSKYYPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + +++ D + + G + +L + L + + Sbjct: 121 SISLKIGDTRSVSEDVIAGTVEMGVVGALS--PNKQLTQDKLMDDHLTLIVPASHPLAEK 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVALDGC 242 + + P + + S + + L S + +E +++ G Sbjct: 179 EAVSIKSIADAPFIIREQGSGTRKFFEKVLADAGIGLDSLNISGQLGSTEAVREAIKAGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWREL 295 G++ A+ ++R G L + +L Y R R +P+ + F L Sbjct: 239 GVSIFSTRAVLGDLRCGSLKSIEISDLDFRRSFYLVRHRQRTASPLCQYFCDFL 292 >UniRef50_C3AM26 YwqM (Probable transcriptional regulator YwqM) n=3 Tax=Bacillus RepID=C3AM26_BACMY Length = 304 Score = 252 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 110/293 (37%), Gaps = 10/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ + +++AA +Q + I+A+EQ +G LFNR + L++ Sbjct: 1 MEIRHLKTFKTIVELGGYTRAADYLGYAQSTVTGHIQAIEQEMGQPLFNRLGKKMVLTDV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK ++ E + + KI I A SL++ LPSI+ + P Sbjct: 61 GKHLLPYANEMIALSEKAKQ-IPSVDNEITGKIVIGAPESLTIYRLPSILHEYKKKYPKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++A E + L+ G D F D + E +L Q+ V D Sbjct: 120 KITLKASTCRELRNDLKSGNIDIAF-LLDTERHEEDLHIEQLVMEQMAFVFPKDYTVTQT 178 Query: 188 FNLAQ---PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L R L R + + F E +KQ + G GI Sbjct: 179 DSQDVQFSQEETFLYTERGCSYRAFFEHYLQRQG-IQHESTFEFWSIEAIKQCVMCGLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 + LP + QE + KL + +E Q Y N +P F +R+ Sbjct: 238 SLLPIITVGQEQKDKKLQAVILNEAKFATQL-VYHKNKWFSPALHEFLMIIRK 289 >UniRef50_Q8EL24 Transcriptional regulator (LysR family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EL24_OCEIH Length = 291 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 119/295 (40%), Gaps = 9/295 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++E L F+ L + +NF++ A R++SQP S I+ LE L R + L+ Sbjct: 1 MHME--ELETFIVLAREKNFTRTATKRSLSQPTVSVHIKNLENEFATSLIQRTTKRVHLT 58 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS---QMPP 125 +G++F+ + Q + L A I++ A+ ++ LLP +I+ + Sbjct: 59 PEGELFYEHALKIWNQYQQLQEHLYQKKQTASGLIRVGASFTIGEYLLPEVIAILQKQYE 118 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + + + ++ +D +R + D + E +L VC+ + Sbjct: 119 QLDFYVTIGNTEKIIDSVRRLEVDIGLV--EGSNYTKDVLQTSFKEDRLVIVCSPEYETN 176 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 H + S + + L + +E+ + V S ++ +K +G G+A Sbjct: 177 FKNLADLHHHKWVIREEGSGTRQYFDH-LVQSNEIQVKSTLVISSTQGIKNSVTNGLGLA 235 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELE 299 L E I++E+ G L ++ + L Y +++N + L +++ Sbjct: 236 LLSEATIKEELAHGTLKMVPIESLYEKRDFSYVLTKGSQLNRNTQLLIDTLTKID 290 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 112/294 (38%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F+ + +C++F++AA +++QP S+ I+ +E +GV L +R + L++ Sbjct: 7 LDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLTDA 66 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ Q + +++ E+ EL + KI++ + P II + P Sbjct: 67 GQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYPNI 126 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + +++ EG D + FD +L V Sbjct: 127 EIQLIEEGAKKVEEQVEEGHLDIGVVLLP--IPSGTFDSFPFVHEKLMVVVYPKHRLAGQ 184 Query: 188 FNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +A H P + + + I R + SS + + ++ G GI Sbjct: 185 TVIALKKLEHEPFILFREGFVLHDRIPEECIRAG-FQPKVVYESSQWDFISEMVAAGLGI 243 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 + LPE + E+ +++ + E I + ++ + +++ Sbjct: 244 SMLPESICR-ELNPNRVITIPLVEPSIDWSLAMIWPKEQYISYAVREWINFVKQ 296 >UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Bacillus RepID=A8FC52_BACP2 Length = 291 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 127/297 (42%), Gaps = 20/297 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + + F+ + + + ++AA + ++QP+ S RI++LE+ + ++LF+RQ L L+E+ Sbjct: 1 MNIENIEAFIYVCQLGSINKAAEALYLTQPSVSARIQSLEKELDLKLFDRQRNKLSLTEK 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F+ + +L + L+ ++ I A S+S LLP+I+ + Sbjct: 61 GEQFYPHAKKILHSYQEAKHSLKQTMIPY--ELTIGCASSISNNLLPNILPALKEKYENL 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I + V K+ Q D + + I +F + + +L Sbjct: 119 KVKIVTGHSKDVVQKVINNQVDFGIVRTE---THPQIESIPIFSDPIGLFVPTYHPLASL 175 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 N+ P + + S+ +++R + + ++ + E K + L G G+ Sbjct: 176 DNINMKELEEQPFIFFDYGSFDWLMLHRLFQK-NNITPNISIEVDHMETAKNLVLQGMGL 234 Query: 245 AWLPEYAIQQEIRSGKLVVLNRD---ELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 ++LP + ++ E+ G L ++ D I I+ Y+ + F +L++ Sbjct: 235 SFLPHHCVRNEVEQGTLKQISIDPSIHFNINIEF-IYKKGKSKS----VFIDQLKQF 286 >UniRef50_C1SP16 Transcriptional regulator, COG0583 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP16_9BACT Length = 315 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 117/308 (37%), Gaps = 11/308 (3%) Query: 1 MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR 60 + C ++ K + F+ + K ++FS+AA +SQP S I LE+ +GV+LF+R Sbjct: 10 ISICNNTESAMDFKQIEAFVFVAKYKSFSRAAEKLLLSQPTISTHISTLEEQLGVKLFDR 69 Query: 61 QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII 120 + L+E G++F+ +L E + ++ + + I + + +LP +I Sbjct: 70 LSKEVVLTEAGQVFYPYAVDILDLRERSHEAVKEFLNEVSGHLHIGYSTVAAEFILPEVI 129 Query: 121 SQMPPLFT---WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPV 177 + + + ++ + + +L +G D + + ++ L + ++ + Sbjct: 130 KKFKEDYYKTFFTLDNGNTQNVIQRLSDGILDLAIVAR--KIPKKDLEYKVLTKDKIVLI 187 Query: 178 CASDEHGEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSE 232 + ++ + S + S + V S + Sbjct: 188 VHKNHKFFTRDSVFIEEILGEEFITREVGSGTRASVEHAFKNKGYDFDSLNAVAVLSSTF 247 Query: 233 LLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERF 291 ++ GIA++ E A+ ++ + + +L++ Y R N + F Sbjct: 248 SIRNAVKRELGIAFMSEMALAEDDHDTSVKAIPVTDLMVEKDVYVVYSKNRTNKKLLKHF 307 Query: 292 WRELRELE 299 + + + Sbjct: 308 IETILKFK 315 >UniRef50_UPI000178A79D transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A79D Length = 291 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 114/293 (38%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E +L F + ++F++AA +Q + + +I+ LE+ GV+LF R L+L++ Sbjct: 1 MELIYLQTFREVAVRKSFTKAADELGYAQSSVTTQIQKLEKEYGVKLFERYGRGLRLTKS 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ +L + + +L + I SL+ LPS++ ++ Sbjct: 61 GEELFKYAVQMLDLFQQSKEKLTKQGG---GILSIGTIDSLAAYFLPSVLHRLRQEHEDL 117 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ D V K+REG+ D ++ + + I + E L + D L Sbjct: 118 AIRLQTDREDSIVSKVREGEYDLGLILENKP-EDTSLNWISIREEPLHLIAHPDHPLHRL 176 Query: 188 FNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + H + + ++ + L R S E +K+ + G GI Sbjct: 177 PVIELEHLADYEWIMTEDTCNYRIMLEKVL-RASGAPVRIGLELGNPEAIKRYIMSGTGI 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 + LP ++EI+ G+L +L I + ++ + L+ Sbjct: 236 SLLPRMVAEEEIKRGELAILPFQHPDIRLDIQIVVHPKKWLSHSLQDMIEMLK 288 >UniRef50_B5XW05 Transcriptional regulator, LysR family n=14 Tax=Gammaproteobacteria RepID=B5XW05_KLEP3 Length = 302 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 133/296 (44%), Positives = 208/296 (70%), Gaps = 4/296 (1%) Query: 3 DCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQV 62 G++L N+E KWLYD + LE+ R+F+ AA +RN+SQ +FSRRI++LE ++G +F+R Sbjct: 2 RTGSVLANLEVKWLYDVIALEESRSFTLAAKARNISQSSFSRRIQSLEASLGFSIFDRSA 61 Query: 63 TPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQ 122 PLQL+ +GKIF R++L ++ ++ ++G ++ Q KI+I AA SLS+ LLP II+ Sbjct: 62 NPLQLTNRGKIFVGYARNMLDDMDFQISRIKGLNNTTQ-KIRIDAAPSLSVLLLPEIIAG 120 Query: 123 M--PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 T+ +E+I+V++AV L+EG+SD I SF++E+L+ PF + ++F+S L V Sbjct: 121 YTDRKNKTFHVESINVNDAVFNLKEGKSDFILSFYNEELMNYPFINHKIFDSYLHLVSPC 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 DEHG LF+L + PL+ Y+ +SYMGR +N+ + R E++FS FVSSMSELLK++ L+ Sbjct: 181 DEHGRPLFHLHRGVLPLMKYANDSYMGRQVNQVIDRTPEITFSLTFVSSMSELLKRMILN 240 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 G G+ WLP+Y+IQ+E+ G+L +L+ D L +PI A+ YR +R+N AERFW+ ++ Sbjct: 241 GDGVGWLPQYSIQRELDEGRLTILD-DRLSLPIGAWLYRSGSRLNQAAERFWQHIK 295 >UniRef50_Q13AV2 LysR, substrate-binding n=2 Tax=Alphaproteobacteria RepID=Q13AV2_RHOPS Length = 319 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 120/297 (40%), Gaps = 11/297 (3%) Query: 6 AILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPL 65 ++ + L F + + R+F++AA +++QPA S ++R LE+ +G +LF Sbjct: 2 MARMHLTLQQLRLFEAVSRHRHFTRAAEELHLTQPAVSIQLRRLEENVGAKLFEHIGKRF 61 Query: 66 QLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM-- 123 L+ G + +L +L+ L D + ++++ S + LP ++ Sbjct: 62 FLTPAGHEMQAACNDILGRLQVLEQSLDSLDDTLKGPLRLSVVTS-TKYFLPHLLGSFIV 120 Query: 124 -PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE 182 P + + + +++L E D + D + + +E+ + + Sbjct: 121 DHPAVLPRLIVTNRERVIERLVENLDDFVIMGQAPD--DLAVEAHPFYENLIVVAAHTQH 178 Query: 183 HGEALF---NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 A+ L L S +R L ++L+ + + +E +KQ + Sbjct: 179 PLSAVRSIPPLQIARERWLVREAGSGTRSAFDRYLIE-NDLAITPYMELGSTEAIKQGVM 237 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWREL 295 G G++ LP ++Q E+ +G L VL+ + + A ++PVA F L Sbjct: 238 AGLGVSVLPISSMQLELTNGCLAVLDVQGFPLCRRWNAVWLKGKTLSPVARAFVDFL 294 >UniRef50_C0Z947 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z947_BREBN Length = 297 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 125/299 (41%), Gaps = 14/299 (4%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 N+E + F+ + +FS+ A +SQP S RI+ALE +G +LF R + L+ Sbjct: 1 MNME--QMEAFIFVALTGSFSKTADLLYLSQPTVSMRIKALETTMGCKLFQRTGHTISLT 58 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 ++G +F ++++ L+ ++ + ++ I+ + +LP ++ Q P Sbjct: 59 KEGDLFLPYAKNIMHMLQEGQQAIQRSQGDVEGELTISTVFVSAFYILPDLVQQFQQLYP 118 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 I + +D + + + + + I+L + D Sbjct: 119 KIKLTILTGHSHQVLDMVLNHEVSFGIA---RAVTHPQINRIQLMPDDMVLAIYPDHPFG 175 Query: 186 ALFNLAQP---HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 ++ L+ ++R S +LIN + H +L + + E++K++ Sbjct: 176 FRHQVSIEEVARERLILFNRGSLDWKLINNAFS-HFQLQNNVIMEADNIEVVKRMVKQRL 234 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELV-IPIQA-YAYRMNTRMNPVAERFWRELRELE 299 GIA+LP +AI +++ G+L ++ L I Y +T ++ + F L + + Sbjct: 235 GIAFLPRFAISKDLDEGELQEVDVLNLPQINRNFELIYLKDTPVHGIMRTFIDFLMQCK 293 >UniRef50_B8FZV1 Transcriptional regulator, LysR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZV1_DESHD Length = 301 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 115/295 (38%), Gaps = 12/295 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + + F+++ + RNFS+A + ++QP S I LE + V+LF+R + + Sbjct: 1 MDFRQIEAFVSVYRLRNFSRAGKALFLTQPTISSHISDLETELEVKLFDRSSREVMPTGA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G IF+ +LL+ + ++ L + + +++IAA+ LLP ++ P Sbjct: 61 GDIFYQYAVNLLETRDCAISSLNQHNRQIEGRLEIAASTIPCQYLLPKLMIGFQKINPNI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + I D ++ + K+RE + E D+ L + +L + A D A Sbjct: 121 RFLIHQGDTNQVIKKVREKKYQVGIVGT--RTDEDKLDYEILTKDRLVLIAARDYIEAAD 178 Query: 188 FN----LAQPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALDG 241 + + R S L + +E +K +G Sbjct: 179 SPCIAVESLLKKQFILRERGSGTRDTFETALKEKGIDPDTLKVVAEMNNTEAIKHAVSEG 238 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWREL 295 G+A + ++ E++S + D L + Y N ++P F + Sbjct: 239 LGVAVVSSLSVGNELKSEAFQAFSIDGLELERSFYLVTYRNQPLSPSVAAFREFI 293 >UniRef50_B7GJV0 Transcriptional regulator (LysR family) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJV0_ANOFW Length = 294 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 124/294 (42%), Gaps = 10/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+TL + +NF++ A ++SQP+ S I+ LE+ +LF R LQ++ Sbjct: 1 MMYEQLKTFITLAEVKNFTKTADILHLSQPSVSLHIKNLEKEFQTKLFIRSPKELQMTPT 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + + + ++ E ++ D + +KI A+ ++ +LPS + M P Sbjct: 61 GELLYDRAKKMITLYEQTKQDILEHHDCVKGTLKIGASFTIGEYVLPSFLFSMQNDYPEL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + E V+ +R Q+D + E + +L V ++D Sbjct: 121 HLEVIIGNTKEIVELVRTYQADVGLI--EGQTNEKELAVYPFMQDELVIVASNDHPLIHQ 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ + + S N R + L + + S ++ +K+ + G + Sbjct: 179 KDVAINDLQNQIWITRELGSGTREYFNH-FIRSNGLKVKSLMIISSNQGIKETLMRGNSL 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 A+L + I++E++ G L V+ + Y Y + N + F L++ Sbjct: 238 AFLSRHVIERELKHGHLSVVRVNHPPFYRTFSYLYSPTMKNNKLIHLFIDLLQQ 291 >UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J293_DESDA Length = 308 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 114/301 (37%), Gaps = 11/301 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F + + NF+QAA ++QPA S ++++LE ++GV LF+R + L+ + Sbjct: 1 MNIDHLKTFHKIAETGNFTQAARDLFLTQPAVSMQVQSLENSLGVPLFDRSRRKVNLTSE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPS---IISQMPPLF 127 G++ + + + + E + S ++ + A+ +S LP + Q P Sbjct: 61 GRVLYEYTQRIFSLVNQMQDEFQSLSQLDTGRLVLGASAIMSAYYLPGYMVLFHQRHPGV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 T + + +K+ G+ + F L L V Sbjct: 121 TLDLAVHNSHVIAEKVYRGELEIGFCGSSPS--HPNLRAHFLHREPLIVVAGRKSALAQK 178 Query: 186 --ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFST-FFVSSMSELLKQVALDGC 242 + P + + + + + H+ F E+ KQ+ ++G Sbjct: 179 DGPVCADDLLAHPFILREQGTRVTNKVQEWFKTHAGRPERPSFMTVDNMEVAKQLVINGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELEIV 301 G+ LP YA E+ +G+L L + + + Y R++ F L EL + Sbjct: 239 GVTALPRYAAALELAAGQLTQLRLESFDLHVNYSLVYMEGQRLSRTVTHFLALLFELGVP 298 Query: 302 L 302 L Sbjct: 299 L 299 >UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QKA9_CATAD Length = 299 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 9/289 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + +F++AA N +Q + + +IR LE ++ ELF+R + +QL++ Sbjct: 1 MEFQQLVTFQRVATVLSFTRAAADLNYAQSSVTNQIRNLEASLQTELFDRLGSKIQLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ LL + A++ G + + I S++ LP ++ P Sbjct: 61 GQRLLLHAERLLALADEARADVAGPA-EPSGTLTIGTMESITSYRLPPLLELFHYRYPAV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 A+ + LR+G D F + D A D + L + +L V A Sbjct: 120 HLALRPSLCADTCRALRQGTFDVGF-LMEPDTGHAGLDSVVLSKERLVLVAAPSFPLASA 178 Query: 186 -ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + A P+L L LT +L+ ++F E +K+ + G G+ Sbjct: 179 PTVTIEALRKVPVLATESGCSYRDLFEIELTAE-QLTPASFLEFGTIEAIKRGVIAGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 + LPE + EI SG L VL + A+R R++ + F Sbjct: 238 SLLPEITVADEIASGSLTVLPWTPPFEVVIQLAWRRGKRLSRELQLFID 286 >UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax=Bacteria RepID=CMPR_SYNE7 Length = 323 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 114/295 (38%), Gaps = 11/295 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + N+ L F + +F++AA ++QP S +++ L +A+G+ LF + L L Sbjct: 1 MKNLTLHQLKVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 +E G+ + R + +QLE + Q ++++A + + +P +I Sbjct: 61 TEAGRQLYKTTRQVFEQLEQLDMTIADLQGMKQGQLRLAVITT-AKYFIPRLIGPFCQRY 119 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P +++ + + ++++ + D + ++ L V + Sbjct: 120 PGINVSLKVTNHEGLINRINDNLDDLYVLSRPPSGFD--ITVQPFLDNPLVVVGPASHPL 177 Query: 185 EALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 ++ P + R S + H+ L+ + +E +KQ L G Sbjct: 178 ANQRGISLERLAQEPFILRERGSGTREATEQLFAAHN-LNLNVKLDLGSNEAIKQAILGG 236 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 G+A L + + + +L + + I Q +A +++ VA F L Sbjct: 237 LGLAVLSYHTLTSAGATPELKMFEVEGFPIHRQWHAVYPAGKQLSTVAATFLDYL 291 >UniRef50_Q2BGK4 Transcriptional Regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGK4_9GAMM Length = 308 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 173/303 (57%), Gaps = 9/303 (2%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 NIETKWL DFL+L K +NFS++A R+++QPAFSRRI++LE A+G EL +R+ P+ L+ Sbjct: 1 MNIETKWLEDFLSLAKTQNFSRSAKERHLTQPAFSRRIQSLESAVGCELIDRRSVPVTLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 ++G +F ++L+ QLES ++ ++ + + I A +H+LSL + P I + P Sbjct: 61 DEGLLFKETAQNLILQLESCISHIQSLAGKSHSVIDFAVSHALSLSMFPGFIQSLQSAIP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEA-PFDHIRLFESQLFPVCASDEHG 184 T + DE L+ G D +F+F D L + F + L + +L PVC++D+ G Sbjct: 121 GITVRQIVANADECSQALKNGICDFLFAFEDSSLNDELKFASLSLEQEKLIPVCSTDKSG 180 Query: 185 EALFNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSEL-SFSTFFVSSMSELLKQVALD 240 LF+L +P L+Y N Y+GR +++ + R + F S M++ LK +AL Sbjct: 181 NPLFDLDDADSFSYPFLSYPDNIYLGRSVSQLIKRPPRVIELQKAFESPMADSLKGMALQ 240 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 G GIAW+P +++ +E++ G LV+ D +P+ YR + +E+ W+ L + Sbjct: 241 GTGIAWVPAFSVTEELKQGSLVICGGDAWQVPLNICVYRKQRVLCGESEQLWQLLLK-RY 299 Query: 301 VLS 303 LS Sbjct: 300 PLS 302 >UniRef50_B6R905 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R905_9RHOB Length = 306 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 112/294 (38%), Gaps = 9/294 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ L F+ + + + F+ AA VS+ A S+RI LE+ +G L NR + L+E Sbjct: 1 MDQISALPVFVMVVEHQGFAAAARELGVSKSAVSKRITLLEEHLGARLLNRSTRNISLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP-LFT 128 G++++++ L+ + + + + ++KI + + +I + Sbjct: 61 AGELYYARAVDALEAAKEAESAVAQMQGKPKGRLKINVPMTFGRLHIAPLIPKFLKLNPE 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGE 185 +I+ I D +D + +G D L ++ ++ + +EHG Sbjct: 121 ISIDMIMDDRTIDLV-DGGFDLAIRG--GRLKDSSLIARKITPCFNVLAASPQYLEEHGT 177 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + L+Y+ S + S + + + L L GCGI Sbjct: 178 PATPQDLQNHNCLHYAYFSDQHEWTLEDPQGQVRVETSGNYQVNNGDALTTAVLGGCGIG 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWRELREL 298 L +A + +RSG L + + + YA N + P F + E Sbjct: 238 RLTTFAAGEYLRSGALTQVLPNYTLPTQTMYAVYPNRKYLPTKTRVFINFISEQ 291 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 122/297 (41%), Gaps = 12/297 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F + + F++A +SQPA +R++ ALE +G L +R + L+ Sbjct: 1 MLLQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + + R ++ + + E+ + + +I I A ++ L LLP I++ P Sbjct: 61 GRLVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTVGLRLLPPILAAFKREHPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---G 184 ++A E + +L EG+ + + + L E + VCA Sbjct: 121 RVHVKADRTQETIQRLLEGEIELAI--LPTPVTHPRLRSVPLVEDPVVLVCAPGRRSELP 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L L+++ S ++ L + + + E + + G G Sbjct: 179 DPLPLAKLGEIDLISFQAPSRFRTFVDAML-EQAGVYPNVTMEFDSHEAVTLMVEAGFGC 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVI--PIQAYAYRMNTRM-NPVAERFWRELREL 298 A +P A+++E+ G +V + + + + A+R +P ER ++ + + Sbjct: 238 ALVPASAVERELALGTVVRVEVEGMPRMARTTSLAFRHPNPGWSPATERLFQMIVDF 294 >UniRef50_Q0AZ61 Transcriptional regulator, LysR family n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZ61_SYNWW Length = 295 Score = 249 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 106/297 (35%), Gaps = 11/297 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + ++ + + +N S+ A +SQPA +++I++LE GV L R L+ +E Sbjct: 1 MNLNLFKTYVRVVETKNLSKTAEEFGLSQPAVTKQIQSLEDYYGVLLLERAGRRLKPTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ + R +++ LE + + + + + A+ +LP I + P Sbjct: 61 GETLYQYAREIIKLLEKTDNIMETVVESKKGILYLGASTIPGQYILPDYIKKFSDSFPYI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +++ D ++ K+ E + D L + + + +L + + H Sbjct: 121 NISLDIGDTEKIFKKVAERELDIGLVG--GWLSNRKVEGFQWLQDELLLIVPENHHLMGR 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALDGC 242 + H + + S + L H + +E + G Sbjct: 179 DEVRIEELLHEKWIFREKGSGTRKAAEELLNNHGIKKEDLHVGMEAGSTEAVLASVESGM 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN-TRMNPVAERFWRELREL 298 GI+ + +AI++ ++ L D+ Y E F ++E Sbjct: 239 GISIVSNWAIKKADPHRRIRSLKIDDPGATRFFYIIYPRQKSRRKAVESFLDFIKEE 295 >UniRef50_D0S485 LysR family transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S485_ACICA Length = 298 Score = 249 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 121/299 (40%), Positives = 192/299 (64%), Gaps = 3/299 (1%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 ++ NIE KWLYD + LEK RNF+ A+ RN+SQ + SRRI+ALE ++G E+F+R+ +PLQ Sbjct: 1 MIQNIELKWLYDLIVLEKYRNFTVASDIRNISQSSLSRRIQALENSLGFEVFDRETSPLQ 60 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--P 124 L+EQGK+F R+LL E N+ +++G ++ + K+ IA+AHSL+ + P I+ + Sbjct: 61 LTEQGKLFILHARNLLDDFEFNIDQIKG-DNHVRSKVTIASAHSLAGYIFPKILGNLKNY 119 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + +EAI+V+E VD L+ GQ D I SF+D+DL+ F +LF ++L+ V A + G Sbjct: 120 QEKIFHVEAINVNETVDSLKNGQCDFIASFYDDDLMNPQFLCHKLFSAKLYLVTAPNHLG 179 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 F+L PL+NY+ +SYMG+ +N+ L H F T FVSSMS LLK + G G+ Sbjct: 180 RPKFSLEDTSIPLMNYTDDSYMGKKVNKFLQDHHSDKFETNFVSSMSLLLKDMIKGGYGV 239 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVLS 303 WLP+Y+IQ E++ +L+++ E V+ + Y YR + R+N +E W ++ ++ ++ Sbjct: 240 GWLPDYSIQDELKQNQLMIMPIKESVLSVDIYLYRSSARLNATSEGLWNFVKAIDWTIA 298 >UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=D0KYG7_HALNC Length = 312 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 107/294 (36%), Gaps = 9/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F T+ + +F++AA + + +QPA + ++R LE+ LF+R + L++ Sbjct: 1 MADRRLKVFNTVARLLSFTKAAEALHTTQPAVTFQVRQLEEHFDTRLFDRTHNRVTLTDV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G + + + + + ++ + + I A+ +++ +LP+++ + Sbjct: 61 GHVVYEISERMFELYDEMDRRVKEMTGEVGGSLNIGASTTIAENMLPALLGKFRLKHRDL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + + V + D + + +L + D L Sbjct: 121 AVRLKVGNTEAIVSMVEHNVVDLAIV--EGTVGNKNLLVETCRRDELVVILPPDHQLAGL 178 Query: 188 FNLAQPH---FPLLNYSRNSYMGRLINRTLTRHS-ELSFSTFFVSSMSELLKQVALDGCG 243 +++ + + S ++ L H + E +K G G Sbjct: 179 ESVSLDQLMSYDFICREEGSGTREMVLNYLIEHGYSDGWDVCMELGSPEAIKGAVQAGMG 238 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 ++ + I +E++ G L + + ++ + + P E R+ Sbjct: 239 LSIMSASGITKELKLGLLKAVPLSPRLFRDFSFVRQRHKFRLPAMEDLLEFSRD 292 >UniRef50_Q4K3G6 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=Q4K3G6_PSEF5 Length = 315 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 121/302 (40%), Gaps = 11/302 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 + + L F + R++S+AA +++QPA S +IR LE+ IG LF+ L ++ Sbjct: 1 MRLTLRQLQIFNEVCDLRSYSRAADEMSLTQPAVSLQIRQLEELIGQPLFDYVGKKLYMT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 E + R + +LE+ +L Q ++K+A S + +P + + P Sbjct: 61 EAAEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKLAV-ESSAKYFVPHLFAAFKRQHP 119 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + ++ + + +L + + D + + + + + + V + Sbjct: 120 EVHLQLTVVNRSQVIRRLSDNRDDLVIMSMVPQ--DMELEFLPFLNNPIVAVAPPEHPLS 177 Query: 186 ---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 L + L+ + S + + F+ S +E ++ G Sbjct: 178 HMGPLRLQDLEPYTLVLREQGSGTRLACEEYF-KEKRVHFTQILEVSSAEAQRECVRAGL 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRELEIV 301 G+A L +A+ E+ +G L+ L +EL + + R++PVA F +R + Sbjct: 237 GVALLTRHALNLELATGGLIELPVEELPLLRSWCLVQAKAKRLSPVAHAFLGFIRSERVQ 296 Query: 302 LS 303 +S Sbjct: 297 IS 298 >UniRef50_Q2RLB0 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLB0_MOOTA Length = 297 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 10/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F T+ + ++ S+AA ++SQ + S +I+ LE+ + VELF R ++L+E Sbjct: 1 MNINHLEAFCTVAQVKSISEAARILHMSQSSLSYQIQLLEKDLDVELFTRTTKGVELTEM 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+I + + LQ E+ +L + + + A+ S+ LP I P Sbjct: 61 GEIVYEYGQTFLQLAENLRRDLDNWKSGQE-HLIVGASSSIGSYALPCTIYSFKEKYPDA 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG-EA 186 + + +E + KL + D + + + + E +L + + G E+ Sbjct: 120 NVKLLVGNREETIQKLLDKTIDIGLI--EGPVDQPGLATRGVTEDELLLIVPAGWQGQES 177 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRH--SELSFSTFFVSSMSELLKQVALDGCGI 244 + PL+ S ++I R L H + + + ++ +K G G+ Sbjct: 178 ITLEELCRLPLILREEGSGTRQVIARALAEHGLGIANLNVVLELNSNDAIKSAITAGHGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 + L A ++EI +G L L + + ++F+R L Sbjct: 238 SLLSRLATRREIHNGSLKALQVKGISFRSTFTIVYPAGKPATNLQKKFFRFL 289 >UniRef50_B5YKH0 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKH0_THEYD Length = 296 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 121/293 (41%), Gaps = 8/293 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+++ K ++FS+AA ++QP S I+ LE+ + +LF+R + + + Sbjct: 1 MDIHQLKIFISVFKNKSFSKAAKELFLTQPTISEHIKTLEEELDCKLFDRFGKVIIPTTE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 +I + + +++++E+ L+ + IAA+ +LP ++S P Sbjct: 61 AEILYENAQGVVEKVENLKEVLQKIKSTPSGNLYIAASSIPGTYILPKLMSSFKNIYPQI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + I+ D ++ L GQ L ++ D+ + +L V + + Sbjct: 121 SIQIDISDSKSVIESLLSGQILLGIVGT--KLRKSKIDYFPFMDDELVIVSPNLIKESFI 178 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVALDGCGIA 245 +P + S + + + L + S ++ +K+ +G GI+ Sbjct: 179 EPEEILKYPFITREEGSGTRKEMEKWLGEMGIDIEKLNIVCTLSSTDAVKEAIKNGLGIS 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVA-ERFWRELRE 297 L ++I+ E+ KL ++ + Y TR P + F+ L+E Sbjct: 239 ILSIHSIKDELEYKKLKIVKIKNYKMNRIFYIATHTTRSLPYIYKLFYEFLKE 291 >UniRef50_B2TNN2 LysR-family transcriptional regulator n=4 Tax=Clostridium RepID=B2TNN2_CLOBB Length = 291 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 112/291 (38%), Gaps = 10/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F N + A +SQP+ S+ I +E + V LF+R L L+ + Sbjct: 1 MNFRKLKIFYETATELNMTSVAKKLYISQPSISQAIHEIEDELEVRLFDRIGKKLYLTHE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+I+ + R +L + ++ + + + KIKI A+ ++ + +LP II Sbjct: 61 GEIYLNYTRRILNLYDESIRTINDINTNEKGKIKIGASTTIGIYILPDIIKGFLKEHSGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + + E + D + + +++E +L + + + Sbjct: 121 EISLAIDNTSNIEKMILENKIDFA--YIEGTTNLDEIVQAKVWEDELIFISSLNHSWSKK 178 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ L+ + S +I L +++ + + F +E +K+ G+ Sbjct: 179 EMVSTKDIIKEKLIMREQGSGTREIIEAYL-KNNNIDYKIFMELGNTEAIKKSVEANLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN-TRMNPVAERFWRE 294 + L ++ ++I+SG L E I +N + F Sbjct: 238 SCLSSRSVDEKIKSGCLKGYRLKEGKITRDLRLIHHRDKFLNKNMKNFISY 288 >UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C6CZP2_PAESJ Length = 300 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 118/295 (40%), Gaps = 11/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L LT+ K +F +A N++QPA S +I+ LE+ L +R P+ L++ Sbjct: 1 MNISQLETLLTISKTMSFRKAGELLNLTQPAVSAQIKTLEEEFKTVLIDRN-QPVTLTDH 59 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK+F +L +E +L + Q I + S+++ +LP ++S PL Sbjct: 60 GKVFLEHAERILAVVEELKQKLSDLNAIPQGHIVLGTTSSMAIQILPRVLSYFQDQYPLI 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 I + + + + G D ++ E D L+ V + Sbjct: 120 KTTIHTMPSSQVLASVENGSVDMGITYISE--KNPNMDSSILYYDSFVLVASPAHPLSQV 177 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +P + + ++ R +++ + + + + S SE +K++ GI Sbjct: 178 AHTTIDMIKDYPFIMLAPDTLGRRFLDQIF-KKNNIQPNIIMELSSSEEVKRMVEINLGI 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWRELREL 298 A + + +I E+R G L ++ EL +N ++F +L+ + Sbjct: 237 AVVSKLSIANELRLGSLKIIKVTELEPYHPVAVVYKSGRYLNTAMQQFLSDLKGM 291 >UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0K1_THIIN Length = 319 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 11/297 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + N + L F + +F +AA +++ PA S +IR LE +G+ LF RQ + L Sbjct: 1 MKNATIRQLRVFSAAARHLHFGKAAQEMHLTPPAVSMQIRELESQVGLPLFERQGKSVSL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP--- 124 + G+ R +L L+ + ++ I + + +P ++++ Sbjct: 61 TLTGEYLVVYARKVLATLKDAEDAMARLRGIKAGRLTIGMVST-AQYFVPRLLARFHAEY 119 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P + + ++ V L+ + D + + + Sbjct: 120 PHVEVRLSVGNREQLVSHLQNSELDLAIMGRPPRDVATR--AEPFAAHPMGIIAPPQHPL 177 Query: 185 E---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 F + S L +H ++ F +E +KQ + Sbjct: 178 STGGPHSATLLTQFNFIIREPGSGTRATFEEYLHQH-QMELPLFTEMQSNETIKQAVMAN 236 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWRELRE 297 GI++L + I E+R+ L V + + + + + YA ++P AE F + E Sbjct: 237 MGISFLSLHTIDLELRNNLLTVPSIEGMPLLRRWYAVNSLAKLLSPGAEAFRYFILE 293 >UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XTW7_PSEMY Length = 309 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 115/286 (40%), Gaps = 11/286 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + L FL + + + ++AA + +++QP+ S ++ LEQA+ +ELF + L L++ G Sbjct: 12 TFRQLETFLAVAEHLSVTEAARTLHLAQPSVSTQLAKLEQALQMELFEQLGKRLYLTDAG 71 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFT 128 + + R + L+ L + ++++ A + + L+P ++ P Sbjct: 72 REVQAGAREIFDALDRLEMRLAQLNGLTTGQLRLGAVTT-AKYLVPRLLGPFCRQYPQVE 130 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH--GEA 186 + + + + L + + D D + + L E+ L + + G+ Sbjct: 131 VQLNIANRSDVIRCLEDNRDDLYVFSQPPD--HLDLECVALAENPLVVIAPAGHRLSGQR 188 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 + P L+ S I RH + + +E +K+ G GIA Sbjct: 189 IRWEQLAQEPFLSREPGSGTRLAIEDHFARHG-WPYKPHMTIASNEAIKESVAAGLGIAI 247 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERF 291 L + + G LV L+ ++ I Q Y R ++P A+ F Sbjct: 248 LSRHTLI-HTAVGNLVELDVEDFPIANQWYLVRWRRKALSPAAQAF 292 >UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=Q2T4U0_BURTA Length = 299 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 116/295 (39%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L FL + + + + A+ +VSQPA +R IR LE+ +GV LF+R+ + +E Sbjct: 1 MNFTHLSAFLAVVEAGSVTGASARLHVSQPALTREIRDLEERLGVVLFDRRPRGMSPTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + + + A L S + +K+AA+ ++ LLP ++ P Sbjct: 61 GRLLAGYAKRIFALTDEAEAALDEFSGLVRGNLKLAASRTIGSYLLPPVLDVFCDRYPGV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 T + ++ + L + F + FD + L V AS Sbjct: 121 TIDVAEMNTELVEAALLTYERQLGFV--EGAYDTTAFDSMVFGRDTLLAVAASSHPLARK 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + +L+ S + H L F+ +E + ++ L G I Sbjct: 179 HRVGVQDIADCDVLSREPGSGTRNAVETAFAEHG-LEFAPRLSVGSAEAMNRLLLRGNAI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELREL 298 AW+ + I+ E+ +G LV L ++ + + ++P A F L E Sbjct: 238 AWVSRFTIEAELEAGALVPLRVTDMTVERDLTIIWHKGATLSPSARIFRDLLVEQ 292 >UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VX33_MARMS Length = 293 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 124/299 (41%), Gaps = 14/299 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 I+ L F+ + + +FS+A V+QPA S+RI +LE ++GV+LF+R +QL+E Sbjct: 2 IDIAELLTFIKVAETSSFSEAGDQLFVTQPAVSKRIASLESSLGVKLFDRIGRQVQLTEA 61 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 G + R + + L+ + +++I+ H + L LP + + F Sbjct: 62 GIRLLPKARKMAEDLQDIKRSMTLQMQDVSGELRISTGHHIGLHRLPKSLKRFQENFPNA 121 Query: 129 -WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA- 186 IE + +EA + +G+++ + + + ++ L V + D Sbjct: 122 QLEIEFVQSEEAYQDVLKGRAELGIITL-SNKENPLIESLPIWSDPLTCVVSKDHPLARY 180 Query: 187 --LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + + ++N++ ++ + + L ++ E+L + G G Sbjct: 181 NNVSLIELAQHACVLPNKNTFTRQIAEQAFGKQG-LKPQVRMNTNNLEILAMLVHIGWGW 239 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELEIVL 302 + LP + + KLVVLN +L + + + ++ A F L+ L Sbjct: 240 SLLPSTLVDE-----KLVVLNLPDLNVERKLGVIHHKQRTLSRAAVAFIELLKSDGTSL 293 >UniRef50_C3BMM7 Putative uncharacterized protein n=3 Tax=Bacillus RepID=C3BMM7_9BACI Length = 298 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 110/296 (37%), Gaps = 11/296 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 +E K L F T + NF+Q A N +Q + + +I+ALE +G LF R L L+ Sbjct: 1 MILEIKQLITFKTAAENLNFTQTAKKLNFAQSSVTAQIKALETELGTPLFERLGKRLFLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 E G+ F ++ L+G + + I A S LPSI+ + P Sbjct: 61 EAGRKFQLYADKMIALSHEAKMALKG-DEEISGTLVIGAQESQCTYRLPSILKEFKTQFP 119 Query: 126 LFTWAIEAIDV-DEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + ++ +KL EG+ D F DE E L +L V + Sbjct: 120 QIKLIFKPAHSNEDVKEKLMEGKLDLAF-ILDECKAEDALHVESLVREKLKIVVFPNHPL 178 Query: 185 EALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 ++ F LL + + E +KQ + G Sbjct: 179 LEKSIISTKDFESETLLLTELGCSYRTIFEELFRAEDVYPVN-KIEFVSVEAIKQCVIAG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWRELR 296 GIA LP ++++I+ G + L + + PI A+ + + ++F R Sbjct: 238 LGIAILPAMVVEKDIQQGTMKELVLENTISPIFTQIAWHKDKWITAPLQQFIEVTR 293 >UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=Rhodobacteraceae RepID=Q1GMA2_SILST Length = 305 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 105/283 (37%), Gaps = 8/283 (2%) Query: 20 LTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIR 79 + + + + F+ AA VS+ A S+RI +E +G +LF+R + L+E G+ F+S Sbjct: 11 VAVAETQGFAAAARRLGVSKSAVSKRITQIENRLGAQLFHRSTRNVSLTEAGEHFYSHAV 70 Query: 80 HLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WAIEAIDVDE 138 + + + + + ++++ + + +IS + +I+ + D Sbjct: 71 RAQEAAQEAEDSVLALQEAPKGRLRVNVPMAFGRLHVAPLISGFLARYPGVSIDMVMDDR 130 Query: 139 AVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEALFNLAQPHF 195 VD +G D L ++ ++ + V A HG Sbjct: 131 MVDLFADG-FDLALRG--GTLADSALVARKIAALRNVLVAAPTYLARHGAPQTVSDLRFH 187 Query: 196 PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQE 255 L YS + + + S + + E L++ L G GI LP + + Sbjct: 188 NCLQYSFSRDFQEWVFDCDGKAETFRPSGSYSVNNGEALREAVLGGTGIGRLPTFTAGPD 247 Query: 256 IRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWRELRE 297 + SG+LV + + YA R P F L E Sbjct: 248 LASGRLVRVLPQCQLPSQTLYAIYPERRYLPTKVRVFIDYLLE 290 >UniRef50_Q0F2Z7 Transcriptional regulatory protein, LysR family n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2Z7_9PROT Length = 308 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 110/295 (37%), Gaps = 11/295 (3%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 + +I K + ++++AA + ++QPA S +I+ +E +G++LF R ++ Sbjct: 4 VFMHISLKQFKIIEAVVDYNSYTEAAKALYMTQPAVSMQIKQIEGQLGLQLFERSGKQIK 63 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP-- 124 +E GK R++ QQ+E L + K+ + A + + P +++ Sbjct: 64 ATEAGKELLHYARNIRQQMEEAKTVLEELKGLKRGKLHLTMAST-ASYFAPRLLAAFHHQ 122 Query: 125 -PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 P ++ + +D L +D + I ++ L + + Sbjct: 123 YPGVKVTLDVTNRSGLLDALDNNTTDMAIMGRPPEGHA--LTGIPFLDNPLVVIAWPEHP 180 Query: 184 GE---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 ++ + S R + H LS + + SE +KQ + Sbjct: 181 LACSDSIPLSDVADESFIVREAASGTRMATERYFSEH-RLSLTPGMEMNRSEAIKQAVMA 239 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAER-FWRE 294 G+ + + I+ E+ +LV+L ++ I Y N + ++ F Sbjct: 240 ELGLGIVSLHTIEMELTLKRLVILKVEDFPIMRHWYIVHRNNKRFAAIQKVFRDF 294 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 112/293 (38%), Gaps = 14/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L+ F L K NF++AA ++Q A S I+ LEQ +G++L NR + L+ + Sbjct: 1 MDLKRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSLTAE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + +L+ +E EL+ IK A L+ LP + Q P Sbjct: 61 GQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAYPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I L G+ D D + L + Q+ Sbjct: 121 QINIHEAGTATLAQMLVNGELDLALIRGDRE--HEQIRQSLLAQDQIAACVPISHPFAKR 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + F PL+ + ++ +N + ++L+ F +++ ELLK + GI Sbjct: 179 SAITLDEFCQQPLVLFKNGYFLRETVNSY-CQQNKLTPQVHFETNLPELLKSMVRRQVGI 237 Query: 245 -AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 LP + + L + D + ++ + ++ A+ F L+ Sbjct: 238 GTCLP-ILVADDPE---LKAIPFDPPIPLQLGIGWKSSHYLSTAAKAFVDFLQ 286 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 111/294 (37%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + + + ++AA +++QPA S++I LE+ +G+ LF+R L+L+E Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ R +L Q+E A + ++ I A ++ LLP +++ P Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 T + + +D L G +D + + L L + ++ Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVALP--VTDEQLTVTPLLNEPLVLIVSTTHPLARR 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + H + + + + R + + T +E L + G G+ Sbjct: 179 SEVMMTELRHERWILSPSSYELREATLKA-CREAGFTPQTVLEGGETETLVRFVAAGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 + +P A+ +L V D+ + +R + +P A L Sbjct: 238 SLVPALAVAGCTDVVRLTV--SDQHLTRSLGLVWRSDRTASPAARALREFLVNE 289 >UniRef50_C0QLD9 LysR n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLD9_DESAH Length = 299 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 115/296 (38%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+ + + ++FS+A ++SQP S I+ LE+ L +R ++ Sbjct: 1 MDLWQLRVFVNVVEQQSFSKAGEVIHLSQPTVSSHIKELEEYFECRLMDRMGRNTVPTKA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI---ISQMPPLF 127 G++ S + LL+ + + + + + I + S +LP++ I+Q P Sbjct: 61 GELLFSYAKRLLRLRDETESAISDFLGKRKGHLVIGGSTIPSGYILPAMIAPIAQAFPEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + A D E ++++ +G + + +L + ++ + AS Sbjct: 121 SLSFVAGDTAEIINQITKGDIEVGIVG--ARVKSPLVAQEKLVDDEMKLIVASSHKWSDR 178 Query: 188 ---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALDGC 242 P L S R I R + + + + Q L Sbjct: 179 SSVTPDMLLTEPFLAREEGSGTWRSITRNMEEAGLNTKALRIIATMGNTASMIQAILGNA 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELRE 297 GI+ L A+ + SG+L L + L + Y R ++P+++ F + L+E Sbjct: 239 GISILSTIAVADLLASGRLKALTVEGLDLKRSFYITTHGKRTLSPLSKTFIKFLKE 294 >UniRef50_UPI0001C34DF6 LysR family transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34DF6 Length = 337 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 124/300 (41%), Gaps = 13/300 (4%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 + K L F+ + + +FS+AA ++QP S + +LE+ + V LF R + L+E Sbjct: 33 RMNLKQLEAFVEVAQSGSFSKAARRLYLTQPTVSAHVLSLEKELDVRLFVRNTKEVGLTE 92 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPL 126 +G+ + ++ + E ++ + IAA+ + LLP ++++ P Sbjct: 93 EGQRLFFHAKQMVDLEKKIEEEFGQWRGEEKQCVAIAASTVPAQYLLPPLLARFNMKYPG 152 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 I +D + V+++ E ++D F+ L + ++ + ++ + + E + Sbjct: 153 EQLKITEMDSSQVVEQIAERRADIGFTGTV--LEKKHCKYLPFYGDEMVIITPNTEKYRS 210 Query: 187 LFNLA-----QPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVAL 239 + N + ++ S + + + + E +K+ + Sbjct: 211 IKNTSKDISWIRKEHMILREEGSGTRKEAEKQFRSLGIMPEELNVVASIGNQETIKKSVI 270 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELREL 298 G GI+ + A+++E SGK++ N +++ A+RF + ++E+ Sbjct: 271 QGLGISVISSLAVREETESGKILAFPIPSERAGRDINVVYNRNCQLSRSAKRFLKTVKEV 330 >UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=Clostridia RepID=Q3AG03_CARHZ Length = 302 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 116/293 (39%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F + K +F++AA +V+QP+ + I LEQ + V+LF+R + L+++ Sbjct: 1 MEFRQLEYFYAVSKLNSFTRAAEQLHVAQPSITIAINNLEQELKVQLFDRSKRKVVLTDE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK+F + +L+ ++ +EL +Y + IK+ + L P I P Sbjct: 61 GKLFLQHVEKILKDVKKAQSELEDLKNYKKGVIKLGIPPMIGAYLFPKIFKGFKNAYPHL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + V L G+ D E + + + Q+ + + Sbjct: 121 ELHVREEGSWAMVSLLENGELDLGLIILPEQ--SENLCMLPITKDQIVLCVSENHRFSQE 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + +SY I L + S + S E +K++ +G GI Sbjct: 179 KRISLRQLEDEQFILLKEDSYTRHKI-IALCNYYGFSPNILLSSCQIETIKELVSNGLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 +L ++ K+V + +E + A++ + ++ A+ F ++ Sbjct: 238 TFLMNGITKK---WDKIVSIQLEEPMNITIGLAWQKDRCLSRAAQAFIGFVQN 287 >UniRef50_A8ZUD0 Transcriptional regulator, LysR family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUD0_DESOH Length = 298 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 105/294 (35%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F + + R+FS+AA +SQP S ++ LE G L +R + + Sbjct: 1 MDLWRLRVFCKVVELRSFSRAAAGVRLSQPTVSSHVKDLEDHFGCRLIDRLGRSVAPTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + Q LL + + AE+ G ++ I + + +LP +I P Sbjct: 61 GELLYRQASDLLARYDGIEAEMAGYQGRVAGRLVIGGSTIPAGHILPGLIGAYRRAYPQV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 T + D ++ + G+++ + ++ V + Sbjct: 121 TVCLLVGDTEKVFFDILSGKAELAVVG--GRTADRRIVQQPFLTDEMRVVVPASHPWAGR 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTR--HSELSFSTFFVSSMSELLKQVALDGC 242 + P + R S + +L + +E + Q G Sbjct: 179 KTVAVADLAKEPFIVRERGSGTRSALEESLAARGAGIEGLNVVAELGSTEAVVQGIKSGI 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWREL 295 G++ L A+ ++R+G L L + + Y A+ + +P A F + Sbjct: 239 GVSVLSSMAVAADVRAGMLKALALRGVKLTRVFYLAFLRDRSQSPAANAFCTLI 292 >UniRef50_C8VX87 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VX87_DESAS Length = 314 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 117/285 (41%), Gaps = 12/285 (4%) Query: 26 RNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQL 85 +NFS+A ++QPA S+ I ALE+ G +LF R ++L++ G++ H + +++ Sbjct: 29 KNFSRAGELLKLTQPAISQHIHALEEYYGAKLFERSSKRVELTKAGEVLHHYAQEIMKMH 88 Query: 86 ESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFTWAIEAIDVDEAVDK 142 + + + +KI A+ ++ +LP ++ ++ + + +K Sbjct: 89 QVAKRAVADLVEMVSGDLKIGASFTIGEYVLPRLLGAFSQKYTEVMFSELIGNTEFIHEK 148 Query: 143 LREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-----ALFNLAQPHFPL 197 RE D + + ++ + +L + A ++++ F Sbjct: 149 TRERVIDVGLV--EGLVEDSHLIIEPFLQDELVFIAAPGHPLAKKTFLTREDISEIPFTF 206 Query: 198 LNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIR 257 + S ++ L L + ++ +K+ GI+++ ++A+++E++ Sbjct: 207 ILREVGSGTKLAMDDVLHELK-LKPARSMTMGSTQAIKEAVEANLGISFISKWALRKELQ 265 Query: 258 SGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRELEIV 301 G L +L + + + Y R + + E F + + + + Sbjct: 266 LGTLKLLRIKDFNVTREFYLIRNKDKFESKATEEFVKFIMDRSVS 310 >UniRef50_C6QF64 Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF64_9RHIZ Length = 305 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 120/293 (40%), Gaps = 9/293 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + + F + ++++AA N+++ A S+ + LEQA+G L +R + +E Sbjct: 1 MDKLEAMNAFAKVVASGSYAEAARRLNLTRSAVSKAVMELEQALGARLLDRTTRRVTPTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF-T 128 G ++ + +L Q++ A++ D + +K+ A S L ++ + Sbjct: 61 AGLAYYERCLAILAQVDETEAQISRLHDEPKGVLKVNAPMSFGTLYLGDAVADFMIRYSD 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 +E D +D L EG D ++++ R+ +++ V + D HG Sbjct: 121 LKVELTLTDRFIDPLEEG-VDVTVRI--GAMVDSSLIARRISPARIVLVASPDYLKAHGT 177 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 L+Y + M R + ++ S+ ++L++ AL G GIA Sbjct: 178 PQSPSDLAEHRCLSYGHMTSMQRWHLTDKGKPVSVAIGACLSSNNGDVLREAALKGIGIA 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRE 297 LP + ++I + +L ++ + + +A N + F L + Sbjct: 238 LLPTFIAGKDIAAKRLQIVLPENQPDDLTIHALYAPNRYLAAKTRVFIDFLVD 290 >UniRef50_B9ITM1 Transcriptional regulator, LysR family n=71 Tax=Bacillus RepID=B9ITM1_BACCQ Length = 297 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 113/296 (38%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L F NF+Q A N +Q + + +I+ LE +G LF R L L+E Sbjct: 1 MEIKQLITFKIAADTLNFTQTAKKLNFAQSSVTAQIKTLEAELGTPLFERLGKRLFLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ F ++ ++ + + I A S LPSI+ + P Sbjct: 61 GRKFQLYADKIIVLSNEAKTAVKD-DEEIAGTLTIGAQESQCTYRLPSILKRFKAQFPQI 119 Query: 128 TWAIEAIDVD-EAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 + + +A ++L EG+ D F DE E L + +L V A H Sbjct: 120 KLIFKPAHSNKDAKEQLMEGKVDLAF-ILDECKTEDALHVEPLMKEELKVVAAPGHHLLQ 178 Query: 187 LFNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 +++ LL L R ++ + E +KQ + G Sbjct: 179 QTSVSIKDLETETLLLTELGCSYRTLFEELF-RIQDVYPANKIEFVSVEAIKQCVIADLG 237 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWRELREL 298 IA LP ++++IR G + L+ + + PI A+ + M ++F RE Sbjct: 238 IAVLPAIVVEKDIREGTIKELHLENTINPIFTQIAWHKDKWMTVPLQQFIDVTREF 293 >UniRef50_UPI000174499E transcriptional regulatory protein, LysR family n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174499E Length = 302 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 126/299 (42%), Gaps = 9/299 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++++ L F L + +F+QA + +++Q A S IRALE+ +G LF+RQ + L+ Sbjct: 6 LDSRQLRAFTVLAREGSFTQAGRALHLTQSAISHAIRALEEDLGCMLFHRQGKRVLLTHH 65 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ + +Q+ A L + +I+I + + S +LP+++ + PL+ Sbjct: 66 GRELLRHAEEIQRQMALARASLGALDQNPRGQIRIGSTPAASQFILPTVLREFKDSFPLY 125 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + +I + + + +L +G D D+ A D LFE +L + + Sbjct: 126 SISIVPGETPDTLQRLEQGVLDLAVCLRPRDV--ARVDCRPLFEDELIFLASPLHPWAQQ 183 Query: 188 FN--LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + SRNS +I + + +F +E +K++ G G+A Sbjct: 184 HPKTKDLAGETYIISSRNSSTFEMIGEYFLKLG-VRPKSFIELGNTEAIKELVKLGLGVA 242 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRELEIVLS 303 + + EI+SG+LV L I Q ++ + F ++ L+ Sbjct: 243 MVAAWTAPAEIKSGELVSLPLVRSRIKRQWVVAHMKQKPVSLAEQTFMTLCEQVGEQLA 301 >UniRef50_A4WZV0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4WZV0_RHOS5 Length = 302 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 109/296 (36%), Gaps = 11/296 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 + L F ++ + ++++AA +++QPA +++ LE+A+ V L R L L+ Sbjct: 1 MRCTLRQLQVFASVARHASYTRAAEELHLTQPAVFAQVKQLEEALAVVLIERIGKRLHLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 E G+ + R L+ +E +L + ++KIA ++ LP ++ + P Sbjct: 61 EAGRAVEATARETLEGIERLEMQLADLQGLRRGRLKIAIVSTV-QYFLPRLLGEFCTLNP 119 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 A+ + + +L + D + L+ + ++ + + +D Sbjct: 120 GIEVALTVTNRQTVIARLAANEDDLCILGQPPEGLD--VVATPVAQNPILLLAPADHPLA 177 Query: 186 ALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + P + S R + +E +K+ G Sbjct: 178 GARAVPFAELAEAPFILREPGSGTRAAAERFFADCG-VRPRVRMELGSNEAIKEAVAAGL 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 G+A L + + E + +LV L+ + AY ++ A F L + Sbjct: 237 GLAILSQDTMAVEAATRRLVALDVQGFPLMRVWNVAYPRGKHLSVAAAAFLAHLTQ 292 >UniRef50_B0TI97 Transcriptional regulator, lysr family n=2 Tax=Clostridiales RepID=B0TI97_HELMI Length = 321 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 101/297 (34%), Gaps = 9/297 (3%) Query: 15 WLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIF 74 L F T+ + S AA +++Q A S++I LE V+LF+R L ++ GK Sbjct: 5 QLAIFKTVVDKGSISLAAQELHMTQSAVSQQILNLEAHFSVKLFDRLHRRLLITTAGKTL 64 Query: 75 HSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPPLFTWAI 131 + L Q ++ + ++I A+ ++ LLP ++ Q P + A+ Sbjct: 65 YPFAVELEQLYGRARNAMQELTQDISGLLRIGASMTIGEYLLPKLLVLFRQTHPRVSIAM 124 Query: 132 EAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD-EHGEALFNL 190 + + D + GQ D F + L QL V +D L Sbjct: 125 DVSNSDHITAMVATGQLDLGFIESPDQLP-GVLTAFPCGGDQLVIVGPADTADSAPLSLA 183 Query: 191 AQPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALDGCGIAWLP 248 + S R + L ++ +K+ G G + L Sbjct: 184 ELFQHHWVLREPLSGTRRFFEQFLQSRGAQPADLQVVMELGSTQAIKEAVKAGLGFSVLS 243 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRE-LRELEIVLS 303 +A+ +E+ L ++ E I Y + F L ++ S Sbjct: 244 RFAVTEEVAQQSLAIIPLAEGPIDRTFTLFYHREKFTTLAVDSFLDFILHQVISPAS 300 >UniRef50_B7HRA4 Transcriptional regulator, LysR family n=70 Tax=Bacillus cereus group RepID=B7HRA4_BACC7 Length = 290 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 123/295 (41%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + F + K +FS+AA + +Q + ++ALE + + LF+R + L++ Sbjct: 1 MEMRHVKTFCAIVKYGSFSKAAHALGYAQSTVTAHMKALENDLHIPLFDRLGKKVLLTKA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G FH LL E E+ +D + + I + SL++ LP ++ P Sbjct: 61 GHQFHPYALELLAIYEKA-QEIPQNTDQLEGTLSITSNESLAVYRLPQLLRTYKQKNPKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE--HGE 185 +E ++A+ KLREG++D +F E + F + H Sbjct: 120 NIVLETNTNEQALQKLREGETDVVFIIG-ESIEHNDFITRTFSNETFGWILPPHYCIHSN 178 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + + ++ +++R L + + T F +S E++KQ + GI+ Sbjct: 179 PFYL--LKDTQFIFTEQSCGYRPMVDRFLRQSGNIPAKT-FETSNVEVIKQSVMCELGIS 235 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 LP +Q+ + +L + + Y + ++PV + F L+ +++ Sbjct: 236 ILPYIVVQESCQKEQLCFQPIETPTVIQSHVIYHKSRWISPVVQSFLSLLKVMKV 290 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 121/293 (41%), Gaps = 11/293 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + + L F T+ + +F++AA V+QPA ++ I+ LE +G LF+R+ + L+ G Sbjct: 3 DFR-LTVFYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTAG 61 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFT 128 + ++ +L ++++ A+ +++ ++P+++++ P T Sbjct: 62 NVLLRHAETIMGVYRQIEFDLNELKGKPGGRLRLGASSTIAQYVIPAVLARFGEQFPDVT 121 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALF 188 ++ + + ++ L + D + + + + +L VC +D Sbjct: 122 LSLLSGNTEQIEQALLHDEIDLGLV--EGRTHHSDVRYTPFVKDELVLVCRADHPLAGRD 179 Query: 189 NLAQPHF---PLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVALDGCG 243 + PL+ S ++ L +E +K G Sbjct: 180 EITLDELKTVPLVLREPGSGSREVVEHALRGAGLRLAELQQAMQLGSTEGIKTYLSSSSG 239 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 +A++ +A+ E++SG L VL+ +L I YA ++ +A+ F R +R Sbjct: 240 MAFVSIFAVPNELKSGTLRVLDVADLTIERDFYAIQLQGMSEGLADTFMRFVR 292 >UniRef50_B8EPF4 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8EPF4_METSB Length = 308 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 100/295 (33%), Gaps = 10/295 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + + K L + + + + AA NV+ A + RI+ LE +GV LF+R L+L Sbjct: 1 MRRMTLKHLETVVAVAESGTIAAAADVLNVTAAALTSRIKLLEDDVGVALFDRTGGRLRL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 + G+ + + L A L D ++ I A + + P +I+ Sbjct: 61 TSAGQEVVTIAMRVDLLLAELKATLTAHKDKNAGRVTIGVAST-AKYFAPRLIASFARGH 119 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P A+ + V LRE D + P + D Sbjct: 120 PRVEIAVTVGNRATIVAALREQTVDVALMGFPP--ADVPVVAEIFGPHPQVVIAPPDHSM 177 Query: 185 EALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 + H + S + +E +KQ + G Sbjct: 178 AKRVGIDKTELCHEGFIIREAGSGTRNNFDAFFGGLVLPPPRVHIEIGSNETVKQAVMAG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWREL 295 G+ + + I+ E+ G+L +L+ + I Q Y R R +P A W+ + Sbjct: 238 LGLTLISAHTIEAEVAEGRLAILDVIGMPIMRQWYVVRPQAREQSPAARSMWQFI 292 >UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=Betaproteobacteria RepID=CFXR_RALEH Length = 317 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 112/299 (37%), Gaps = 11/299 (3%) Query: 6 AILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPL 65 + L + + L F+T+ + +F +AA +++QPA S +++ LE +G+ LF R L Sbjct: 3 SFLRALTLRQLQIFVTVARHASFVRAAEELHLTQPAVSMQVKQLESVVGMALFERVKGQL 62 Query: 66 QLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM-- 123 L+E G +L +++ L+ D Q I I + S P +++ Sbjct: 63 TLTEPGDRLLHHASRILGEVKDAEEGLQAVKDVEQGSITIGLIST-SKYFAPKLLAGFTA 121 Query: 124 -PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE 182 P I + + + L++ D L+A + V + Sbjct: 122 LHPGVDLRIAEGNRETLLRLLQDNAIDLALMGRPPRELDA--VSEPIAAHPHVLVASPRH 179 Query: 183 HGEALF---NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 H L S + + R + + +E +KQ + Sbjct: 180 PLHDAKGFDLQELRHETFLLREPGSGTRTVAE-YMFRDHLFTPAKVITLGSNETIKQAVM 238 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRE 297 G GI+ L + + E+R+G++ +L+ I + + R++P +E L E Sbjct: 239 AGMGISLLSLHTLGLELRTGEIGLLDVAGTPIERIWHVAHMSSKRLSPASESCRAYLLE 297 >UniRef50_D1P1S5 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P1S5_9ENTR Length = 330 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 118/297 (39%), Gaps = 8/297 (2%) Query: 6 AILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPL 65 + +I+ + F+T+ + + ++AA + ++++ A S+++ A E G+ L R L Sbjct: 20 NKMIDIDYSLIPIFITVVEQGSLTKAADTLHMTKSAVSKKLMAFETQTGIRLITRSTRHL 79 Query: 66 QLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP 125 QL+E G+I++S ++ + + + +D +KI+A L ++ + Sbjct: 80 QLTEAGEIYYSWLKKAHETINDGREAIARYADTVDGILKISAPMIFGTLHLNKLLPEFLK 139 Query: 126 LFT-WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---D 181 + E I D+ VD + EG D +L ++ L + + + Sbjct: 140 RWPQLRTEIIFDDKLVDLIGEG-FDIAIRI--GELQDSSLISRTLSPCRSVLCASPAWLE 196 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 E G L YS L + F ++ S L Q AL G Sbjct: 197 ERGIPKNLQELAEHNCLLYSYFQAGQTWSFTHLGEKVRFTPKGNFRANNSLSLHQAALQG 256 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNT-RMNPVAERFWRELRE 297 G+ LP++ + +I +G+L+ L D + YA + + F L+E Sbjct: 257 LGVCQLPQFIVAPDILAGRLIPLLPDYHLPLHHIYAVYPDKEFLPKKVSAFLDFLQE 313 >UniRef50_C4XLK5 LysR family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XLK5_DESMR Length = 299 Score = 245 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 106/298 (35%), Gaps = 12/298 (4%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + ++ + L F + + R+FS+A +SQP S I ALE+ + +LF+R + Sbjct: 1 MVKMDVRRLQAFAKVYELRSFSRAGEELLLSQPTISAHISALEEELETQLFDRLGRTVLP 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 ++ G + + + QL+ A++ S ++ I + + ++P ++++ Sbjct: 61 TQAGDVLYRYCTTIFTQLDHAKADIMALSARVAGELVIGGSTIPAHYIIPRLVARYVDAY 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---- 180 P + D E K+ +G + + L V + Sbjct: 121 PEVRVDMTGGDTSEIAQKVADGTVHVGIVGAPAPY--PELVSLPYLDDALVVVAPASLSL 178 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVA 238 + E+ + P + + S + + + + + S V S + + Sbjct: 179 PDMTESGWQDRLAGLPWIMREQGSGTRQTLEASFAKGGMDIRNISPVLVVHSSLAVLECV 238 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWREL 295 G G+A + A + + G + L L + Y R + P F + Sbjct: 239 EAGLGVAAVSTLAAKTYLERGTVAGLEVPHLDMRRSFYVIHHGKRYLFPALRAFLKIC 296 >UniRef50_Q2WAU7 Transcriptional regulator n=7 Tax=Proteobacteria RepID=Q2WAU7_MAGSA Length = 309 Score = 245 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 109/283 (38%), Gaps = 8/283 (2%) Query: 18 DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQ 77 F+ + + +FS+AA +S+ SR++ ALE +GV L +R L +E G+ + + Sbjct: 10 AFVRVAETGSFSEAARRLGLSKSMISRQVSALEADLGVRLLHRTTRSLSPTEAGRAYLER 69 Query: 78 IRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WAIEAIDV 136 + +L L+ + + +++++A S +G L + + + +E Sbjct: 70 CQRILADLDEANLLVSHLQAVPRGRLRVSAPLSFGIGHLSACLPGFLERYPEIELEMGFT 129 Query: 137 DEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEALFNLAQP 193 D VD + EG D L ++ RL + + + G Sbjct: 130 DRHVDLVEEGW-DLAVRI--GRLADSSLIVRRLAPVRRMAAASPAYLERRGTPRRPEELS 186 Query: 194 HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQ 253 L + + ++ F + ++L+ +AL G G+ LP + + Sbjct: 187 AHDCLTHGGRVQSEWRFTGDDGKPVQVEVRGRFHADNGDVLRDMALAGLGVVLLPSFFLG 246 Query: 254 QEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 +IR+G+LV L + + A ++P F L Sbjct: 247 DDIRAGRLVPLLEAYVPLDSSLNAVYPHGRHLSPKVRAFVDHL 289 >UniRef50_Q01RY1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01RY1_SOLUE Length = 307 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 105/277 (37%), Gaps = 10/277 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E L F + + +F++AA ++QPA + +++ LE+ +G+ LF+R + L+ Sbjct: 1 MEPIRLRVFRIVAEELSFTRAAERLFLTQPAVTMQVKNLEEELGLRLFDRTGQRIVLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+I + + +L + ++ + A+ +++ LLP + + P Sbjct: 61 GRILDDYTKRIAALCGDAERDLAVLKGETRGRLALGASTTIAQYLLPRLAGEFLAAFPAI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA- 186 ++I + + + V L +G+ + + E ++ V A Sbjct: 121 QFSIISGNTSDIVAALADGRI--GLGLIEGPAGRSDVKCEPFVEDEIVLVTPPAHEFAAG 178 Query: 187 --LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALDGC 242 L A ++ S +++ L R + +E +K G Sbjct: 179 GELDPAALKAASIILREHGSGTRQVVEEALKRARLDTRGLKITLELDSTESIKSAIAAGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR 279 G+ ++ +A+ +EI G L + L I Sbjct: 239 GVGFVSRWALGKEIALGLLRTVPVKGLRIRRHFQFVY 275 >UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWP3_CHRSD Length = 296 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 108/297 (36%), Gaps = 9/297 (3%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 + ++ + L F+ + + + AA +SQ A S+ + LE+ +GV LF R L+ Sbjct: 1 MSTHVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLE 60 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--- 123 L++ G+ +L L+ + R + + +AA+ ++ LLP + + Sbjct: 61 LNDAGRRLLPYAEKVLNGLDELVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIER 120 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 P + + ++ + ++ +D + E+ + ++ V A Sbjct: 121 HPAVDLQLRLRNTEDVMRDIQRFDADLGLI--EGQCSESRLVSELWCQDEMVVVAAPQHP 178 Query: 184 GEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 A L + S + + H E E +KQ Sbjct: 179 LAARDGLGVEELQAAQWILREPGSGTRAIFEAAIHPHVE-RIRVRMELDQHEAIKQAVRA 237 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 G G+ L ++ E+ G+LV L + + + +P+ + F LR+ Sbjct: 238 GFGLGCLSRLSVAGELERGELVALRSPLQLTRSFSLVWHPERYRSPLWQAFKVFLRD 294 >UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N6N4_9GAMM Length = 300 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 116/300 (38%), Gaps = 20/300 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T+ L F+ + + +FSQAA +++QPA S+RI LE + +LF+R L+ Sbjct: 1 MDTQSLQAFIAVAETESFSQAAHRLHLTQPAVSKRIAMLEDTLDCQLFDRLPRKATLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ + +H++ +L EL S ++I +H + L LP I+ + P Sbjct: 61 GEALMPKAKHIVSELLEIKTELASLSGDVSGTLRIGTSHHIGLHHLPHILRKFHSTYPQV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 A++ + + A + L G+ D F+ + + D ++ L VC+ Sbjct: 121 KLAMQFLGSEAACEALANGELDIAFATLPLE-QDPKLDMQAIWRDPLTFVCSHTHPLSKQ 179 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHS---------ELSFSTFFVSSMSELLK 235 N+ + N+ +I + + +SS E +K Sbjct: 180 KNIHLKDLTQHEAILPEPNTVTFEIIEAAFKKEKLSLQAALPSRYRETISMMSSYMETIK 239 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 +A G G A LP++ Q L+ LN R + + F L Sbjct: 240 MMASVGLGWAVLPDHMAQD----KDLIRLNLGIHPYRNLGVLQRKGKTLGSAGKAFLAIL 295 >UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYQ6_9PLAN Length = 293 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 114/292 (39%), Gaps = 10/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F + + + S A +SQPA S+++R E A+G +LF+R L+L+ Sbjct: 1 MNLHHLAIFHEVAETGSVSLGAEQLMISQPAASKQLRDFETALGEKLFDRTGRGLRLTTV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK+ + R + + D + ++ + A+ +++ LLP ++++ P Sbjct: 61 GKLLNEYARKIFTLEAEAERVVALVRDVRRGELFLGASTTIAGYLLPQVLARFHQQHPEI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 + + D ++ + + D + + + E E +L V A+ Sbjct: 121 RVHVSVGNTDFVHRQVLDYRVDLGLT--EGFVNEPGLTATSFAEDELVVVAAATHPLVKK 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + S + + ++ + S +E +K V G G+ Sbjct: 179 RRVKADDLSGQSFVLRESGSGTRAVQEQAISMCG-VEVREVMTLSSTEAIKHVVAAGVGL 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWREL 295 A + ++ E+ SG+L + +L IP + + R +P A F L Sbjct: 238 AIVSRLSVGAELVSGELCAIRLADLQIPRPLHLVQAQDRFASPAARAFHEAL 289 >UniRef50_UPI0001C36638 LysR family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36638 Length = 301 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 118/302 (39%), Gaps = 19/302 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L F+ + + ++FSQAA ++QP S I +LE+ +G LF R ++LS Sbjct: 1 MNLKQLEAFVCVAEVKSFSQAAKKLYLTQPTVSAHIHSLEKELGARLFIRTTKDVELSPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + R +LQ ++ L + +KI + A+ +LP I+S P Sbjct: 61 GELLYGNARKMLQLEKNILRDFTRADTPGIQKITVGASTVPGQYILPQILSLFSRTYPGN 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D E V + +G+ + F+ L + + +L + + EA Sbjct: 121 QLELMEADSLEVVRMVLDGKVEIGFTGT--RLEDPTCVFEPFYYDRLVVITP---NAEAY 175 Query: 188 FNLAQPHFP--------LLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQV 237 + FP + S + R L H + S E +K+ Sbjct: 176 REYEKTGFPIERFYEEKWIIREEGSGTRKETERYLKEHGVDLRRMNVVATISNQETIKKS 235 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMN-PVAERFWRELR 296 GIA + A++ + SG+L+ E I + Y + A F + +R Sbjct: 236 VSTAMGIAMISSAAVEDYVASGQLLRFPLAEGDIYRKLYMVWSKSNKPGKAARLFIQFVR 295 Query: 297 EL 298 EL Sbjct: 296 EL 297 >UniRef50_A9AUC8 Transcriptional regulator, LysR family n=2 Tax=Chloroflexi (class) RepID=A9AUC8_HERA2 Length = 300 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 125/294 (42%), Gaps = 10/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F+ + RNF++AA +++QP S++I+ LE+ +GV LF R ++L+ Sbjct: 2 LDLQKLRMFVAAAQSRNFTRAAEQLDLTQPTVSQQIQTLERELGVSLFERLSRGIELTAA 61 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ ++ +R + ++R + + ++L+ LP ++ + P F Sbjct: 62 GRALLPHAEQMIALERIAEQAVRAAAGQSERTLLLGVGNTLATYALPDLLQRFNWEHPAF 121 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I + ++ + ++ G+ + ++ + ++L + + D+ L Sbjct: 122 VVHIGTGNTEQLLAQVISGEFELALVGSP--IVHTQLIIMPFLTTELVVIVSPDDPWARL 179 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + A +L S + ++ L ++ V E +K+ G GI Sbjct: 180 KQINIEALHGRRMLLREEGSALQASVSELLNAQ-QIRPKQPIVLGNLEAIKRSVEVGLGI 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 A +P A+++E+ +G+L ++ + + + + A+ F LR+ Sbjct: 239 ALVPAMAVRREVAAGRLRQIHLANVPTRRVYNVVHHRDRHITNAAQLFLDLLRK 292 >UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0N992_EUBSP Length = 335 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 112/294 (38%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+++ + + ++AA + +++QP+ S I+ LE+ G++LF+R + +E Sbjct: 1 MTLRHLNIFVSVYEYNSITKAADALHIAQPSVSLVIKELEEYYGIQLFDRIGRGITPTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-- 128 GK +S H++ ++ + ++I A+ ++ +LP +I + F Sbjct: 61 GKELYSYAIHIVSLFNEMAQRIKNWDNV--GTLRIGASITIGTHILPGLIKEYQKDFPYL 118 Query: 129 -WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + + D + D + L + +++ + Sbjct: 119 RIKVTVNKSATIEQHILDNKIDIGLIENQPD--HPEILSQPFMKDNLCAIVPNEDPLSSK 176 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + P L + S +++ + + + + SS ++ + + G+ Sbjct: 177 AYITLEELASRPFLMREKGSAGREILDACFS-LKNIHVNPLWESSSTQAIVKGVSMNLGV 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELREL 298 A LP I+++I + L + Y + + F +++ Sbjct: 236 AVLPYLLIKRDIEEHNVNYLPFKTPLTRNLNIIYHKSKYLTRNMLSFIGLCKKV 289 >UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QF45_CATAD Length = 307 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 110/301 (36%), Gaps = 11/301 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + + L FLT+ + FS AA +SQP+ S +R LEQ++ L +R ++ Sbjct: 1 MTQLNLHRLSIFLTVVETGGFSAAAQKLYMSQPSVSNHVRNLEQSLQTTLIDRSGPRIRP 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 + +G++ R + E +A +R S ++++ ++ LLP ++++ Sbjct: 61 TAEGEVLAEYARRIFLLTEEAVAAIREVSGVQSGRLEVGGTTTVGTYLLPRLLARFRERH 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 I + + + +L +G+ + + + +L V A Sbjct: 121 QNIECDIVVGNNGQILKRLLDGE--LGLAIVAGQPAAPQLKTETVLDERLLLVAAPGHPL 178 Query: 185 EALFN----LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 L S L L + E +KQ Sbjct: 179 THPTPHITAPQLAGERFLLREPGSQTRDLQEAALINWDLDDMPKADMWG-PETIKQSVAA 237 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRELRELE 299 G GI+ + E+AI E++ G+L VL D + AYR + ++P F R L Sbjct: 238 GLGISLISEHAIDTEVKDGRLAVLEVDPPLRSRPVVIAYRRDRLLSPAERAFVALARGLR 297 Query: 300 I 300 Sbjct: 298 T 298 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 109/293 (37%), Gaps = 11/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L FL + K NFS+A SQ A S +IR LEQ G LF+R ++LS Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G++ + ++ +L + + + + I A + L +LP I ++ P Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFPQV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + + +G D + + +F +L + A Sbjct: 121 QITVYRNFSRKILQAVEDGVIDLGIATLP--VKSPSLKVHPIFRDRLELMVPVRHPLAAK 178 Query: 188 ---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +P + + + Y + +++ ++ L+K + G G+ Sbjct: 179 ESVTIEEIAEYPQI-FPKTGYTRQQLDKLFRPYNS-KLRVAMEIPSVGLIKSFVVSGVGV 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 L Q E+R+GK +L + + + YR + + A F +R Sbjct: 237 TLLSSTFAQDEVRAGKAKMLPIAGVDMWRELGLIYRNDRTLPRSATAFIDLMR 289 >UniRef50_A3EQ05 Putative transcriptional regulator, LysR family n=2 Tax=Leptospirillum sp. Group II RepID=A3EQ05_9BACT Length = 303 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 123/296 (41%), Gaps = 10/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L FL + + +F+QA + ++QPA S +++ LEQ +GV LF R+ + L+E Sbjct: 1 MTHDQLRIFLKVAELGSFTQAGETLFLTQPAISLQVKTLEQHLGVPLFERKGRQVLLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G R +++++ A + S A ++I ++ ++ +LPSI+ + P Sbjct: 61 GVRLLPHARRIMEEIADARARVAELSSGALGNLRIGSSTTIGTAILPSILYEFSQKNPQI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIR-LFESQLFPVCASDEH--- 183 ++ ++ V L+ + D F D EA L + +L V + ++ Sbjct: 121 RTSLSILNSHRIVFDLKTSEIDIGFIEGDLTRTEAQGVRRSFLAQDRLVLVDSREKPFVS 180 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDG 241 G+ PL+ S +++ +L F+ + ++K++ G Sbjct: 181 GDETSLEEIRRLPLILREAGSGTRQILEDSLLDRGFPIDLFTVSLTVGQTGVIKKMVGKG 240 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 GIA++ AI++E + L + + + R++ F + E Sbjct: 241 AGIAFMSVLAIEKEDQD-LLRTVRVRDFSPIRDLWIVTPGRRVSSATRLFLDCVHE 295 >UniRef50_A8MEQ1 Transcriptional regulator, LysR family n=5 Tax=Bacteria RepID=A8MEQ1_ALKOO Length = 290 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 117/294 (39%), Gaps = 12/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F + + + ++AA ++QPA S I LE + V LF+R + L+E Sbjct: 1 MKIRHLRIFKVVCEEESITKAAEKLFMTQPAVSNAISELEDHLKVCLFDRISRRIYLNET 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK+F ++ LL+ E ++ + A I+I ++ +++ +LP I + Sbjct: 61 GKLFLKKVITLLELYEDLEKNVKELEENA--TIRIGSSITIANFILPKSIVEFETMYKNT 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + + L + D + + I L +C+ Sbjct: 119 PTKVIVGNAGKIEEMLEHNEIDLALI--EGVIYNEELIKIPFSSYPLVMICSPKHKFAQQ 176 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + LL + S + + + L H+ +S + + S+ S+ L Q GI Sbjct: 177 GPIDINQVIQERLLLREKGSAIRDVFDSALLLHN-ISVNPNWTSTNSQALIQAVKQNLGI 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVI-PIQAYAYRMNTRMNPVAERFWRELRE 297 + LP+ + +EI SG+LV + + + + + + + ++ Sbjct: 236 SVLPKILVAEEIASGQLVEIKVKDFELVNMNHIVFHKDKFQTTSFKALVEIIKN 289 >UniRef50_B6XF57 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XF57_9ENTR Length = 318 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 120/297 (40%), Gaps = 12/297 (4%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + ++ L F+ + + + ++AA S ++++ A S+++ ALE + G+ L R LQL Sbjct: 1 MTGVDYALLPIFIAIVEQGSLTKAADSLHMTKSAISKKLMALEASTGIRLITRSTRHLQL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP--- 124 +E G+++++ ++ + ++ A L S +KI+A L +++ + Sbjct: 61 TEAGELYYAYLKKAHRAIDDGNAALSRYSGAVDGTLKISAPTVFGHLHLTALLPEFLKCW 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---D 181 P + D+ VD + EG D +L ++ L + + Sbjct: 121 PQLNAELVFD--DKLVDLVGEG-FDMAIRI--GELKDSSLVSRTLSPCHSVLCASPIWLE 175 Query: 182 EHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 EHG L YS + + + + F ++ S L Q AL G Sbjct: 176 EHGSPQNLDELAGHNCLLYSYYQAGQTWLFTHQGKMVRFTPTGNFRANNSLALHQAALQG 235 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNT-RMNPVAERFWRELRE 297 G+ LP++ +I +G+L+ + + + YA N + F L+E Sbjct: 236 LGVCQLPQFIAAPDILAGRLITVLPEYHLPQHHIYAVYPNREFLPKKVSAFLDFLQE 292 >UniRef50_A6LZH1 Transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=A6LZH1_CLOB8 Length = 296 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 121/294 (41%), Gaps = 10/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + F ++ + NFS AA+ +Q + +I+ LEQ + ++LF + + L+ Sbjct: 1 MDIRHFKTFKSIIEEGNFSNAAMKLGYTQSTVTSQIQQLEQELSIKLFEKIGRNMVLTPL 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 GK LL ++ + D ++KIA A SL L ++++ P Sbjct: 61 GKELIPYADELLNTVKKIE-SIGKYGDNITGELKIAVAESLMSYKLQNVLAMFKEKAPNV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ A++ + + L G+ D ++ + ++L + + VC+ E L Sbjct: 120 RLSMVALNCYDIKNMLASGEIDLGLMYNVGS-KNESLNAVKLSDFDVALVCSPQFEQEKL 178 Query: 188 ---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + L+ S +++ + E +K+ GI Sbjct: 179 DFSTPNQKINTSLIINEVESIYRKILESYFFDKNIF-LDNTIELGSIEAIKKCVASNLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRELRE 297 ++LP + I++E+ +GKL L +L I YA+ N ++P F +R+ Sbjct: 238 SFLPRFTIEEELENGKLKELKAGDLNAKITAIYAHHKNKWISPAMSLFIELVRK 291 >UniRef50_C0Z9T7 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9T7_BREBN Length = 290 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 119/292 (40%), Gaps = 8/292 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + F + +F++AA + SQ + I+ LE+ +GV LF+R +QL+ Sbjct: 1 MEIRQFQTFKAVVDFNSFTKAAQALQYSQATITSHIQQLEEEMGVPLFDRLGKKIQLTAY 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ ++ + LL ++ Q +++I A+ ++++ L I+S+ P Sbjct: 61 GRELYTYVEELLVSYAKIK-DISANEQSLQGELRIGASETITIYRLGDILSKYRASYPGV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D +KL +G D + + + L + +L + D E + Sbjct: 120 NISFVMDDCSRLREKLHDGLLDIVITL-EPKLDDPNLVVELFSTERLVFIGGRDHSFEKI 178 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 ++ + + R R L E+ S E +KQ +G G++ + Sbjct: 179 --EDAGEECMIFSGEHCALRRFFLRFL-EKREIKPKHHLEFSSMEAIKQSVANGLGVSLM 235 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELE 299 P +++ + K+ ++ +E ++ AY N ++ ++F + E Sbjct: 236 PYISVEALLNEQKVKMIACEEELLFYAQIAYHKNKWLSRAHKKFIDLMLESR 287 >UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=Q1AUB8_RUBXD Length = 320 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 114/307 (37%), Gaps = 18/307 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L FL + + N S+AA ++QP + R++ALE+ +G +LF R ++L+E Sbjct: 1 MLYRQLECFLAVARTGNLSRAAEEMYLTQPTLTARLKALEEELGDQLFVRTSRGMRLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F ++ E L + K+ + A+ + LP ++ + P Sbjct: 61 GREFLPYAERVVSSFEEGKRRLEELRGASGGKLVVGASPGVGTYALPGLLERFVGAYPKV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ ++ ++ + + + ++ + + L+E +L V A + Sbjct: 121 NVSVRTGHSEDILEMVLREEVHLGLT---REMRHPEVESVPLYEDELVLVVAPEHRFTQR 177 Query: 188 FNLAQP---HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + L+ + +S T T E K++ GI Sbjct: 178 GSAGLAEIGEEQLILFDNDSSYYEQTQALFTSAGIRELRT-LEVDNIEAAKRMVEHRLGI 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELV--IPIQAYAYRMNTRMNPVAERFWREL------R 296 A+LP AI + + +G LV++ ++ R + + F + Sbjct: 237 AFLPRSAIVRAVSAGNLVLIRVEDGPEMTRSIVALRRRDAPASGPVRAFLELAYGMAERK 296 Query: 297 ELEIVLS 303 E LS Sbjct: 297 EERTKLS 303 >UniRef50_B3E2N5 Transcriptional regulator, LysR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E2N5_GEOLS Length = 294 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 116/293 (39%), Gaps = 9/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L FL + R+FS+ + +++Q S+ IRALE + V LF+R + + L+E Sbjct: 1 MTLKQLEVFLAVADTRSFSKGGEAVSLAQSTASQHIRALEDELNVRLFDRSASQVALTEV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G++F+ + + + +R Q +++ A+ + L+P ++ P Sbjct: 61 GRLFYDHAAGICRHCSEAVEAVRRFQGLEQATLRVGASTIPAAFLIPDMLGHFSTAWPGV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ D E + L++ + + + + + + ++ V + Sbjct: 121 RLELQQGDTHEVIRLLQDERVELAVVGGH--IDDDSINMQEVMTERIVLVARPGLSPVGI 178 Query: 188 FN-LAQPHFPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVALDGCGI 244 PL+ S ++ L ++ SE +++ L G G Sbjct: 179 LEYNQLAQLPLVIREAGSGTRTAVDSALQKNGIDPRRLRVVAQLGSSEAVRRAVLSGAGA 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELR 296 A++ A+ E+ G L+ L L I Y A+R ++P A F ++ Sbjct: 239 AFVSTLAVGHELADGTLIELTVSGLTINRSFYLAWRRGKSLSPAALEFMAMVK 291 >UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B5WW96_9BURK Length = 334 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 107/299 (35%), Gaps = 11/299 (3%) Query: 6 AILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPL 65 + + + L F+ + +F++AA +++QPA S +I LE+A+G+ LF R L Sbjct: 14 NFVRTLTLRQLQIFIVASRYTSFARAAEELHLTQPAVSMQIHQLEEAVGLRLFERVARKL 73 Query: 66 QLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM-- 123 L+E G++ +L +++ + I + S + P +++ Sbjct: 74 TLTEAGEVLTHHASRILGEIKDTEDAMMSLKSADSGSITVGIVSS-ATYFAPKLLAMYSH 132 Query: 124 -PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE 182 P + D + L++ D L+ L + Sbjct: 133 LYPRVDVNFSVGNRDALLRLLQDNAIDLAIMGRPPPELDT--TAEPLASHPQVVIAPLSH 190 Query: 183 HGEALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 L S +H + + +E +KQ + Sbjct: 191 PLCGARRFDLQELCNDIFLLREPGSGTRMAAEAMFRQH-LFTPAKTVTLGSNETIKQAVM 249 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRE 297 G G++ + + +Q E+R+G++ +L+ + I + +++P + F + L E Sbjct: 250 AGMGVSLISLHTLQLELRTGEIALLDVNGTPIERTWQIVHLRSKQLSPTSVMFRQFLLE 308 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 115/293 (39%), Gaps = 11/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L FL + + ++F++A+ S VSQP S+ I+ LE+ +G+ELF R ++L++ Sbjct: 1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVELTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G + Q + +++ ++ +EL + + ++I + G P ++ P Sbjct: 61 GHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENYPNV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 T+ + + + + +G D + E F + + L V Sbjct: 121 TFQLVEDGSIKVQEGVGDGSLDIGVVVLPAN--EDIFHSFTIVKETLMLVVHPSHRLADE 178 Query: 188 FN---LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 P + + + + I + + +S + + ++ GI Sbjct: 179 KECQLRELKDEPFIFFREDFVLHNRIMTECIKAG-FRPHIIYETSQWDFISEMVSANLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 LPE + + K+ V+ + VIP +R + ++ A + + Sbjct: 238 GLLPERICRG-LDPEKVKVIPLVDPVIPWHLAIIWRKDRYLSFAARAWLEHTK 289 >UniRef50_A8VYP9 Conserved repeat domain n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VYP9_9BACI Length = 300 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 112/303 (36%), Gaps = 13/303 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + F + + +FS AA S +SQP + ++++LE + LF R + L+ Sbjct: 1 MNLDHVRTFQAVARHGSFSAAAKSLYLSQPTVTSQVKSLEDDLNAILFVRTKHEVSLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK+ + E+ + A+ ++ +LP ++ P Sbjct: 61 GKVLDRYANDVFNLCMEARNEIGALEGELCGMLYAPASLTVGESVLPLMLHAFKAAHPQI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 E ++ + ++ +R G+ + + D+ +A + E +L D+ Sbjct: 121 ELKAEVMNSSKIIELVRLGEREMGLI--EVDVDQAGLETEPFMEDELVLFARYDDPIAEK 178 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSF---STFFVSSMSELLKQVALDG 241 ++ P L+ + S + L + + +E +K G Sbjct: 179 SAISAEEIPQFSLIMREQGSGTRTVFEEGL-KTKGIHIEDCHLVLEIGNTEAIKTAVEAG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRELEI 300 G++ L + I++E+ SG V++ EL+ Q ++ V RF +R + Sbjct: 238 LGVSVLSKNTIRKELESGLFQVISIKELMFTRQLSLVYEKKKSLSAVTMRFMDLIRSRDW 297 Query: 301 VLS 303 S Sbjct: 298 SQS 300 >UniRef50_A8FFK1 LysR family transcriptional regulator n=1 Tax=Bacillus pumilus SAFR-032 RepID=A8FFK1_BACP2 Length = 297 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 109/292 (37%), Gaps = 12/292 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L F T K NF++ A +Q + + I ALE+ +G LF R + L+E Sbjct: 1 MEIKQLMMFQTASKVLNFTKTAQMLGYAQSSITANIVALEEELGTPLFERLGKRVILTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F +L L + G + ++I A+ + LP I++ P Sbjct: 61 GRQFQHYTDEILGLTGEALEAVGGM-NEPSGILRICASETQCTYRLPHILTDFQTKYPKV 119 Query: 128 TWAIEAIDVD-EAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 + + + L EGQ D + ++ + L + + VC Sbjct: 120 ELIFRPGIAEKDVLTLLLEGQIDVALLSMNP-VVSSHLLVKELKDEPMAIVCCPTNPLSK 178 Query: 187 LF---NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + LL +LT+ + + E +K+ + G G Sbjct: 179 KQKVYPIDINEQRLLLTEE-CDYRYAFEHSLTQAG-AKPRSKLELADVEAIKKCVMAGLG 236 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRE 294 IA LPE ++++EI G ++ +N + + + N M+P + F Sbjct: 237 IAVLPEISVKKEIAEGNIIKINWMDPCFSTKIQLFWHKNKWMSPALKAFVDL 288 >UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSN5_9PROT Length = 300 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 101/295 (34%), Gaps = 10/295 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F + K +F++A + +++QPA + +I+ LE+ LF+R + L++ Sbjct: 1 MADRRLQVFHAVAKHLSFTKAGEALHMTQPAVTFQIKQLEERFNTRLFDRGGGRIALTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ +L + + + + A+ +++ +LP I+ + P Sbjct: 61 GELVLDYAERILGLSADLDLRVAEMTGQMSGSLLVGASTTIAEFMLPPILGEFNVRYPQV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + + + D + + + +L +C Sbjct: 121 RARLTVANSEAISNAIAAHTLDIGLV--ESLVNHPSLQCEVCGDDELQVICTPTHPLAQR 178 Query: 188 FNLA---QPHFPLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDGC 242 ++ + S + + L T + E LK V G Sbjct: 179 TDVDARSLMAHDFIAREPGSGTREVTDDYLRACGVEPAQIKTLMELASPEALKGVVATGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 G + + + ++E + G LV + + + Y+ + V F R Sbjct: 239 GFSIVSRASFEKERQLGSLVAIPLRPRLKRTLSLVYQKERFRSKVVLTFVDFARN 293 >UniRef50_A8U3M8 Transcriptional regulator n=2 Tax=Bacteria RepID=A8U3M8_9PROT Length = 313 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 115/294 (39%), Gaps = 9/294 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + F+ + + + + AA N+S S+++ ALE +GV L NR + L+E Sbjct: 1 MDVLTGMTIFVAVVENSSLAGAARHMNLSPSVVSKQLSALEDRLGVRLLNRTTRRVSLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP-PLFT 128 G ++ + + +L ++ A + + +KI A + + + + Sbjct: 61 VGSAYYERSKRILADVDEAEAAVSTAHSSPRGLLKITAPSTFAHRHVAPHLPGFMDRNPE 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 ++ + D VD + EG D L ++ +L + V A D + G Sbjct: 121 VQVQMLVADRLVDLVEEG-VDLAIRI--AQLKDSSLIARKLAPNHRKLVAAPDYLAKWGT 177 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 L++ S + + + ++ + + +AL G G+A Sbjct: 178 PARPEEITDHALISLQPGSPINDWHFVVDGEETVIRARGAIATNHGDSILALALSGAGLA 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWRELREL 298 L + + + I++G+L+ + + + + YA N ++P F L E+ Sbjct: 238 MLAAHVVGEHIKAGRLISVLDEHVREDVPIYAVYPSNRHLSPKVRAFVDYLVEM 291 >UniRef50_C4GDC9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C4GDC9_9FIRM Length = 314 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 124/297 (41%), Gaps = 11/297 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+ L K NF++A+ +SQPA S+RI++LE+ +GV LFNR + L+ + Sbjct: 1 MDITKLNSFIVLAKKGNFARASELLYISQPALSKRIQSLEEELGVPLFNRIGSRSYLTVE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ F + ++ + +LR + + A + + + ++PS IS+ P Sbjct: 61 GQNFLRYAQQMVSTYNLAVEDLRQINGLETGTLNFGATNFIGVYIMPSFISRFHKKYPKI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFS---FHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 + + +D L + Q + + + + +L V + Sbjct: 121 HINMIINNSRTILDMLHKNQLEFAAISDYILRDKTSRDQYLSCPFVKDRLKLVVGNAHPL 180 Query: 185 EALFNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 + + + ++ ++ S + + RHS F V S E +K+ ++ Sbjct: 181 FSRGHCSLKDVENELYISKTKYSSQNQFLEEIFQRHS-FDFKNRMVISNQEAVKECVINN 239 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 G++ L ++ QE+ +L L+ DE I Y + + P A F LR+ Sbjct: 240 IGVSILSTRSVTQEVLHQRLATLSFDEFEIERNIQYTCLKDRHLTPAARIFLDFLRQ 296 >UniRef50_A4Y0W1 Transcriptional regulator, LysR family n=13 Tax=Gammaproteobacteria RepID=A4Y0W1_PSEMY Length = 320 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 113/303 (37%), Gaps = 11/303 (3%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 L + + L F + + ++S+AA ++QPA S +IR LE+ +G LF L Sbjct: 4 TLLRMTLRQLQVFRAVCEHGSYSRAADEMALTQPAVSLQIRQLEELVGQPLFEYVGKKLY 63 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--- 123 L+E + + +LES +L Q ++ + S + +P + ++ Sbjct: 64 LTEAAEALRRASSDIFGRLESLDMQLSDLQGSLQGQLNL-CVESSAKYFVPHLFAEFRRH 122 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 P + + ++ V +L + D + + D + + + V A D Sbjct: 123 YPEVSLNLTVVNHALVVRRLTLSRDDLMIMSQVPQ--DMALDFMPFLNNPIVAVAAPDHP 180 Query: 184 GEALFNLAQPH---FPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 + L LL S R F+ + ++ A+ Sbjct: 181 LCSQQTLQLQDLTAHALLIRESGSGTRRACEEY-CNQKRAHFAQTLEIGSLDAQREAAIA 239 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWRELRELE 299 G G+A LP +A++ E+ G L L EL + R++PVA+ F +R Sbjct: 240 GLGLALLPRHAVRLELEHGLLRELPVAELPLQRSWCVVNIRGRRLSPVAQAFVDFIRSER 299 Query: 300 IVL 302 + Sbjct: 300 PTI 302 >UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RU53_9GAMM Length = 297 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 125/291 (42%), Gaps = 15/291 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++T+ L F+ + + +FSQAA +++QPA S+R+ LE+ +G ELF+R + L+E Sbjct: 1 MDTQNLKAFILVAETGSFSQAAEKLHLTQPAVSKRVALLEEQLGTELFDRIGRIISLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 GK Q + + + L++ +R + ++++A +H + L LP ++S P Sbjct: 61 GKALLPQAKSVERALDAAEQSVRDLAGDVAGQLRLATSHHIGLHRLPPVLSSFSQTFPEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---- 183 I+ +D ++A + + +G+ + + + +++ L + A D Sbjct: 121 HIDIDFMDSEQAYELISQGKVELAVVTLAPK-EQTNVISLPVWQDPLDFMIAKDHELLRS 179 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 G A P + N+Y G++I R H L ++ E ++ +A G G Sbjct: 180 GNTPDLQAMSRHPAILPGLNTYTGQIIKRLFDSHG-LQLEVSLATNYLETIRMMASVGLG 238 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWR 293 LP R L ++ + I Y ++ A+ F Sbjct: 239 WTILPRSM-----RDESLATIDVASVAIERTLGLIYHRGRSLSRAAKAFIE 284 >UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=Desulfuromonadales RepID=C6E9D5_GEOSM Length = 305 Score = 242 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 116/298 (38%), Gaps = 13/298 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + K L F+ + + +FS+ A + ++Q S+ I ALE G++L +R +E Sbjct: 1 MNLKQLEVFIKVAESGSFSKGAEATFITQSTVSQHISALESEFGMKLLDRTGKGALPTEG 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPS----IISQMPPL 126 GKI + R L++ + L + ++ IA + ++P+ +IS+ P Sbjct: 61 GKILLERARKLVEYAKEIPVALARFKGIEEAELNIAGSSIPGEYMIPAALPLLISRF-PG 119 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 T + D + + KL + + E D L + +L + + Sbjct: 120 VTIVLLQGDSRDVLRKLMAEEVEFGVVG--GRFEEESLDFTPLAKDELVLIAPAGHRWAK 177 Query: 187 LFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHS--ELSFSTFFVSSMSELLKQVALDG 241 + + P + S GR + L +E +K+ + G Sbjct: 178 KSRITKEELMAEPFVLRETGSGTGRATAKALREAGLDPAKLKVAVHLGSNEAVKRAVIAG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRELREL 298 G++++ ++Q+E+ G LV + E+ I A R ++P A F + E+ Sbjct: 238 IGVSYVSAVSVQRELEQGSLVQVRVAEVEIKRDFFLATRKGRELSPAAIAFKEIMIEM 295 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 242 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 120/295 (40%), Gaps = 16/295 (5%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + LY F+ + K + +QAA +V+Q A SR+I LE+ +GV+LF ++ LQL+ Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F + +L LE + E+ D + +I++ HSL + ++P +++ P Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + +G+ D F L +LF + Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAF-ISPFPDEHEQVCGEVLLTEELFAILPPSHPLAGE 179 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + +S + ++ + F +E ++ + G G+ Sbjct: 180 QEIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAG-FTPKIGFEGEETETIRGLVAAGMGV 238 Query: 245 AWLPEYAIQQEIRSGKL----VVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 + LPE A+ +G L V + + I +R N +M VA+ F L Sbjct: 239 SLLPEMALY---HAGVLQSAKVRVRTPNVTRNIGI-IHRSNEKMPLVAKVFHGFL 289 >UniRef50_C8N722 LysR family transcriptional regulator n=4 Tax=Proteobacteria RepID=C8N722_9GAMM Length = 299 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 119/295 (40%), Gaps = 10/295 (3%) Query: 11 IETKWLY---DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 +E L F+ K +F+ AA +++ +RI LE + V L R L Sbjct: 1 MELNNLNDITAFVASVKSGSFTAAAKQLGLTRSTIGKRIARLEARLNVRLLQRNTRNLAP 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF 127 +++G++F+ + +L++L++ L S Q ++KI+A L +LP +++ + Sbjct: 61 TDEGRLFYERCTAVLEELDNAEQCLAQRSIKPQGRLKISAPLVLGKTILPPLLADFLHRY 120 Query: 128 T-WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EH 183 ++E D+ D + +G D + ++ + + ++ A +H Sbjct: 121 PQTSVELSLTDDYADLISDGY-DLALRNGNPPQCDS-LIARTVAQQKMLTCAAPGYLVQH 178 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 G H L++ + R + + + S F + E L ++AL G Sbjct: 179 GTPQSPDDLAHHQCLHFLHGGRVSRWHFQQKGKETTFQGSGRFSTDNGEALLELALSAFG 238 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELRE 297 I LP Y +Q + +G L + D P+ A + + ++P + E Sbjct: 239 IVQLPHYLVQAALDAGSLKSVLSDFQPKPVPVMAVYPSRKQLSPKVRALVDMMGE 293 >UniRef50_Q47YE9 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47YE9_COLP3 Length = 309 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 113/293 (38%), Gaps = 9/293 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 E + F+ + + +F+ AA N S+ S+ I LE+ +GV+L R L L+E G Sbjct: 10 ELSDVAAFVCVVQTGSFTAAAEQLNTSKSVISKYITRLEKRLGVKLLARTTRRLTLTEIG 69 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WA 130 + F+ R L+ +++ + + +KI A S + + + + Sbjct: 70 RTFYEGSRQGLEAIDNAEEAVSFLQGKPRGTLKINAPLSFGALHIAPALEEFIHRYPEMQ 129 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGEAL 187 I+ D+ +D +++G D + LE R+ V A + + G Sbjct: 130 IDLRFDDKKIDMIKDG-FDLTVRITHQ--LEGNLIARRIAPCHHALVAAPNYLAKRGTPK 186 Query: 188 FNLAQPHFPLLNYSRNSYMGRL-INRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 ++ Y ++ + + + S +++ L G GI+ Sbjct: 187 RPEDLVAHNVITYQYQQSPWEWEFTAAKSKPKRVRVNGSVQMNNSLAIREAVLAGVGISR 246 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNT-RMNPVAERFWRELREL 298 +P +A+ ++I+SG+L+ L ++ Y M P F + ++ Sbjct: 247 MPTFAVGEDIKSGRLIQLLPKYSLLEHSIYLVFPERNHMAPKTRAFIDYMVKI 299 >UniRef50_Q1DCG4 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DCG4_MYXXD Length = 302 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 112/293 (38%), Gaps = 10/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + L F + + +FS+AA +V+Q A S++IRALE +L +R + + Sbjct: 1 MQLESLKMFCDVVETGSFSRAAQLNHVTQSAVSQQIRALENRYEQKLLSRSARQVTPTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ + +L + E+R + ++ +S+ L L S+ Q+ P Sbjct: 61 GERLFRGCKEILARFAEVEQEIREQATEVAGTTTVSTIYSVGLHELNSVQKQLLKSHPKV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + D+ D + G ++ + + A D + + +L VCA D Sbjct: 121 NMRLNYRRNDQVYDDVILGAAEIGIVAYPQ--PRAGVDILPFRDDKLSVVCAPDHPFATK 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + A P + + R + + ++R R + + E +K+ G G+ Sbjct: 179 QKVSLTALSGVPFIAFDREAPTRKALDRLF-REKSIDINPVMEMDNVETIKRAVEMGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 A LP Q E++ G LV E + R ++ + + Sbjct: 238 AILPMSTAQGEVKGGSLVAKPFAEGPVSRPIGLLIRKGKYLDRASAAVLEAFK 290 >UniRef50_P52595 HTH-type transcriptional regulator cbbR n=2 Tax=Rhodospirillum rubrum RepID=CBBR_RHORU Length = 298 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 108/289 (37%), Gaps = 10/289 (3%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 + + F + + +FS AA ++QPA S +I+ +E G+ LF + L L++ G Sbjct: 9 LRQMQIFDAVARHLSFSNAARELGLTQPAVSLQIKQIEALAGLPLFEQMGRVLLLTQAGT 68 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFTW 129 I +R +L + + ++I + + P ++S P Sbjct: 69 ILLGHVRTILAAVTDADKAMDALKGKRAGALRIGVVST-AKYFAPRLLSVFTAGYPGVEL 127 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH-GEALF 188 + + ++ + ++E D L + + V ASD L Sbjct: 128 GLTVANREQILGMIQENALDLFIMGRPPTEPA---VRAELAPNPMVMVAASDHLVRRKLT 184 Query: 189 NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLP 248 L S L+ + +T H L S +E +KQ + G GI+ L Sbjct: 185 FHDLSGETFLMREPGSGTRILMEKLMTDHGVL-PHRMIEMSSNETIKQAVMAGMGISLLS 243 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWRELR 296 + E+ G+LV+L+ + L I Y R + PVAE L+ Sbjct: 244 RNTMSLELSVGRLVILDVEGLPIQRDWYVVIREGKHLAPVAEAMVAFLK 292 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 125/297 (42%), Gaps = 11/297 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 L N+ + L F+TL + ++F++A+ ++SQPA S I+ +EQ G LF+R LQL Sbjct: 20 LMNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQL 79 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 S +G+ F R LL + +L + Q KI++A S ++ P ++ Sbjct: 80 SPEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREY 139 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P ++E + ++ +D +REGQ + +F + + + LF + + Sbjct: 140 PDINISVEDVVMESVIDAVREGQVELGITFEPDQMD--GLEFTPLFTDRWIALVHPKSPL 197 Query: 185 EALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 A L A P + +R S+ + L+ ++ + ++ + ++ G Sbjct: 198 AARKKLSWTALMEEPFIAMNRGSWSRNTTEKALSEAG-VTPTRLLEANQLATIGRMVSVG 256 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWRELRE 297 G A +P+ QQ G L I Q + R ++ A+ L E Sbjct: 257 LGTAVVPQLCRQQMESLGILCK-TIGRPSIERQVGIFTRKRRSLSGAAQALIAHLLE 312 >UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cepacia complex RepID=B1YXM2_BURA4 Length = 302 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 113/291 (38%), Gaps = 9/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F + + + S A +VSQPA +R +R LE +G+ LF+R + L+E Sbjct: 1 MNFTHLLAFYEVARAGSISAGAERLHVSQPAVTREVRELEDRLGIVLFDRMPRGVALTEG 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK+ + + ++ EL + +KI A+ +L + +P I+ P Sbjct: 61 GKLLYEYASRIFTLADTAEKELAELAGLGSGHMKIGASGTLGVFFVPEAIAAFNARHPRV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE-- 185 + + + L + F + ++ R+ ++ V A+ Sbjct: 121 AIDLTVTNTERVEAGLHD--LSFTIGFIEGPFDDSILHARRIGSDEIAVVAAAGHPLAGT 178 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + ++ S +I + R L S +E +K++ L +A Sbjct: 179 KVRARDLVDRTVIMREPGSGTRAIIEESYRRAG-LEIEPLMSVSHTEAIKRMLLSQHALA 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWREL 295 ++ ++ E+R G+L ++ +++ I + ++P ++ + + Sbjct: 238 YISTLSVADELRRGELAIVEVEDMRIVRPLHMVWAKGRSLSPSSQALFDLV 288 >UniRef50_C8WTC6 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WTC6_ALIAD Length = 304 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 13/295 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L+ F + + R+F++A+ N +Q + S +I+ALEQ +G LF+R +QL+E Sbjct: 1 MDFKQLHTFAVVARERSFTRASALLNYAQSSVSAQIQALEQELGTPLFDRIGRSVQLTEV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ + LL Q+ES L + G + + A SL LP ++ P Sbjct: 61 GQKVLPLVHDLL-QMESELRSIAKGGYEPSGTLVVGAPESLIAYRLPPALAVFHQRYPRV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHG 184 A E L G+ D ++ A L ++ V + Sbjct: 120 HLQFRADSCAEHRAALARGEIDVAL-LLEQSAPPAGLAFQTLTPERIVLVAHPKIAASNP 178 Query: 185 EALFNLAQPHFPLLNYSR---NSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 A LL + + R + + + E +KQ A+ G Sbjct: 179 SASTPSLIESAVLLLVEASKGGASYREVFERQMM-QMGIRIQRSMEFASVEAVKQCAIAG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 GIA LPE +QQE+ +GKL L ++L IP A+R M A + + +R Sbjct: 238 LGIALLPEMVVQQELDAGKLTRLPWNDLKIP-TYLAWRDGRWMPQAAREWIKCVR 291 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 119/289 (41%), Gaps = 9/289 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L F ++ + R+FS+AA + ++SQPA SR +R LE+ +G+ L R+ ++L+E Sbjct: 1 MNLHLLRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G + R + +S +A+LRG + + I A+ ++ LP +I++ P Sbjct: 61 GAELYQHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAEFLRQFPAI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I + + + +L + D F + + ++ + + E +L + SD Sbjct: 121 DVRIISENTELIQRRLLAYELDIAFI--EGSVEDSRVEEVFWHEDELVILAHSDHPLLNR 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +L + + S + L + + + + L Q G G+ Sbjct: 179 KSLKASDLDAERWVLREQGSGTRSVTL-ALLKQAGVKVDRTIEVGGNGALVQSVAAGLGL 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 A + A ++ + GK+ VLN + N +P A+ Sbjct: 238 AMVSSVAAREHLSVGKVNVLNFPDRFKRPLHRIRLRNKPESPAAQALVA 286 >UniRef50_A3YG12 Putative transcription regulator protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YG12_9GAMM Length = 299 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 116/290 (40%), Gaps = 10/290 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 E + + F + + ++FS+AA V++ A S++I LE+ +GV L NR L L+E G Sbjct: 3 ELRRIGVFTRVVETKSFSEAARQLGVAKSAVSKQIVQLEKEVGVRLLNRTTRSLSLTEAG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WA 130 +IF+ ++ + + L+EL+ + ++I+ S L +I ++ L+ Sbjct: 63 EIFYRHSAEIVNRTKIALSELKEYQNQPTGTLRISCPVSFGTEHLIPVIKEVRALYPLLK 122 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE----A 186 I+ + D ++ + EG D L E+ +L V AS E+ Sbjct: 123 IDLLLEDRIINMVEEG-VDLAIRI--GWLQESNLVA-KLVCETPVSVFASPEYLAQKGTP 178 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 ++ S S + + + S+ + ++ G GI+ Sbjct: 179 KTPQDLQKHDWISLSLFSSPLTWEFEKKGQKQSVQMHSQLKSNSVAAVIALSKSGQGISA 238 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNT-RMNPVAERFWREL 295 L ++ +Q + G L L D + P YA + + P F L Sbjct: 239 LTKFCLQNDFEKGLLQPLLTDYKLKPSGIYAVYPHREHVPPKVRIFIDFL 288 >UniRef50_A4A328 Transcriptional regulator, lysr family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A328_9PLAN Length = 301 Score = 240 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 104/300 (34%), Gaps = 10/300 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L F +F+Q A + Q + + +++ LE+ +GV LF+R L L+E Sbjct: 1 MELKTLATFRAAAATLSFTQTAAALGYVQSSVTAQVQQLERELGVPLFDRIGNRLALTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ LL + A + + + I+ ++ LLPSI+++ P Sbjct: 61 GQRLVGYADRLLALADEARAAVSTTA--PVGTLSISGPETIVSYLLPSILAKFRQQHPAV 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG--- 184 + E ++ +GQ D F + ++ + L L + A Sbjct: 119 WVRCVPSPIGELKRRVLDGQLDAAFVLEEP-VVPGSLNVAPLRPEPLALIAAPSHPLVKK 177 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + P+L + L S E +K+ G GI Sbjct: 178 RRVQARDLAGEPILFTETGCTYRNKFEQALHAAHAHPGQKAQEFSSVEAIKRYVAAGLGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN-TRMNPVAERFWRELRELEIVLS 303 A LP A++ E +S L VL D + + +P F + S Sbjct: 238 AALPSVAVEAERKSRTLAVLAWDGPQLTVHTQLVWSATRWTSPALSAFVETVMACPWQAS 297 >UniRef50_Q3K9A7 LysR-family transcriptional regulator n=4 Tax=Pseudomonas RepID=Q3K9A7_PSEPF Length = 302 Score = 240 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 125/293 (42%), Gaps = 9/293 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + F+ + + +FS A + +QP S+ +RALE +G +L R L L++ Sbjct: 1 MDKLNAMAIFVRVVERGSFSAVARELHTTQPTISKVLRALENELGGKLIARSTRKLSLTD 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 +G+ ++++ R++L +++ + G + ++I ++ S + S +++ F Sbjct: 61 EGQRYYNECRNILAAVDAAEHSFQSGRETVAGPLRIGSSVSFGRLHIASRLAEFLQRFPQ 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 ++ D+ +D + EG S +L ++ R+ + V D HG Sbjct: 121 VQVDLQLSDQNLDLVSEG---LDVSLRIGELNDSGMIARRIGTTHRLTVATPDYLRRHGH 177 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 L ++ S +H ++ S+ SE ++++ L G G++ Sbjct: 178 PQSPQDLAQHNCLQFNLLSTQNLWTYEKDGQHHDVRIQGNAQSNNSEAIREMVLGGLGVS 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWRELRE 297 P + +++++G+++ L +D + +A N R + F + + Sbjct: 238 LSPVWLFSEDLKAGRVIALLQDYQTRSLPIHAVSPANRRQSARVNAFVDFMTQ 290 >UniRef50_B8GUA3 Carbonate dehydratase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUA3_THISH Length = 305 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 110/292 (37%), Gaps = 9/292 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + F+ + F+ AA VS+ S+ + LE +G L NR + L+E Sbjct: 1 MDRLTGMSTFVEVVNAGGFAAAAQRLGVSRAQVSKAVMRLEAHLGTRLLNRTTRRISLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 G++++ + R +L++++ SD + ++ ++A S + L +I + + Sbjct: 61 TGRVYYERCRDILEEIDEIERIAGEQSDRPRGRLTVSAPTSFGILHLQKLIPEYITAYPE 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 + D VD + EG D +L ++ R+ S+ + + G Sbjct: 121 VQVSLSLSDRFVDVVAEG-FDLAIRI--GELEDSSLIARRIAPSRRVFCASPEYLARQGT 177 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 L Y+ + + + + ++L+ AL G G+ Sbjct: 178 PKVPQDLAIHACLIYANDLKPDTWTLHGPRGTESVKVNGPVCADNGDILRASALAGLGVT 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELR 296 LP + + ++ SG+L + I +A + R ++ F L Sbjct: 238 LLPTFIVGPDLASGRLQQVLHAYCPADISIHAVYPSRRYLSAKVRTFVEFLV 289 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 117/294 (39%), Gaps = 11/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E L + + + NFS+AA + +VSQP+ S++I+ LE +G LF+R +L++ Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F + +L+++++ E R +D Q +I + +++ LLP +I+ P Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + D + L + F+ LF+ +L ++ Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIASLP--LQDERFEVRELFDEELLLALPNNHRLVDQ 178 Query: 188 F---NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + +G + R + S+ E ++ + G GI Sbjct: 179 KKIIPEDLLEEKFILMKEGHCLGDQVLHFCHRQ-DFHPQVSCRSAQMETVQSLVQSGMGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMN-TRMNPVAERFWRELRE 297 +P A+Q++ RS K V + + A+ + A + + + E Sbjct: 238 TLVPRMALQED-RSVKPVYRSLSDPSPKRTIVAFWPRQRPLGKAAAAWLKLMEE 290 >UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=Enterobacteriaceae RepID=B4ETA7_PROMH Length = 296 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 109/294 (37%), Gaps = 14/294 (4%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 I + L F + K + +QA+ +SQ A S + LE +GV+LF+R L + Sbjct: 1 MRITLRQLEVFTEVLKSGSTTQASQQLALSQSAVSASLTDLENQLGVQLFDRVGKRLVTN 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---P 125 E G++ + + LL++ + G+ ++IAA+ ++ +LP ++ P Sbjct: 61 EHGRLLYPRALSLLERATEVEQLFQAGN----GALRIAASTTIGNYILPQMLGNFHRNYP 116 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + + +E V + E + D + + + ++ C+ + Sbjct: 117 DIPLEMSIGNTEEVVKSVSEFRVDLGLI--EGACQSSELISQKWLLDEMVIFCSPEHPLA 174 Query: 186 ALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + P + S ++N L S + SE +K + Sbjct: 175 KAKTVTLADLQSAPWILRENGSGTRDVLNHLLF-ASLPGYRIEMELGNSEAIKHAVMYEM 233 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWREL 295 GI+ L IQ +I SG L + + L + Y Y ++ ++ Sbjct: 234 GISCLSRRVIQDQIESGSLKEIKVEGLKLQRTLYLVYHRQKHVSDALKKLLSYC 287 >UniRef50_A8H0Z4 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A8H0Z4_SHEPA Length = 302 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 118/297 (39%), Gaps = 12/297 (4%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + F+ + + +FS AA ++ +Q S+++ ALE +G +L R L L+E Sbjct: 1 MDQIGAMKAFVRVVQTGSFSAAAREQSSTQATISKKVAALESLLGAKLLTRSSRELSLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 G ++ ++ +L+ A++R + +++AA + I+ + + Sbjct: 61 VGAVYFENCVAIIAELDEAQAQVRSQQASPKGILRVAAPVVFGCQFIAPILGEFLIRYPE 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 ++ + D+ VD + EG D + L ++ LF++ L V + + + Sbjct: 121 IKVDLMLSDKHVDLVAEG-VDLAIR--AKQLEDSSLVARHLFDNPLITVASPEYLKRFTQ 177 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE---LSFSTFFVSSMSELLKQVALDGC 242 + YS + + + E + Q+ALDG Sbjct: 178 PKEPQELRAHNCIVYSMLKSVNIWHFEQAKGGGDKISVPVGGNCRCDNGEAILQLALDGV 237 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWRELREL 298 GIA LP + + + I GKL + + L P+ A +R P F L++ Sbjct: 238 GIAQLPTWMVDKHINQGKLQRMMPNYLSHPLPFNAIYPQSRYVPLKVRCFIDYLKQC 294 >UniRef50_A3Y5Z0 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y5Z0_9GAMM Length = 289 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 120/293 (40%), Gaps = 14/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + T L F T + +FS AA +++QP S+RI +LE +G LF+R +QL+E Sbjct: 1 MNTLALAAFTTASEENSFSLAAEKLHLTQPGISKRIVSLEDQLGCRLFDRIGRRIQLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F +LQ +S L +R S + IA + L L + + Sbjct: 61 GKTFLPHAYKMLQDAQSGLNAVRNLSHTIDGFLSIATTQHIGLHHLAQPVKRYIIEYEEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + ++ + +A + +G+ + + + I L+ +L VCA D H +L Sbjct: 121 AFNLDFLTSKQAYADVLQGKLELAVITEPTQM-DEQLRFIPLWTEKLKFVCAKDHHLASL 179 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +++ + +S+ R+I+ + LS S+ E +K + G G Sbjct: 180 NSISLKDLSSVQGILPDASSFTRRVIDDIF-EQANLSIIPRAASNYLEAIKMLVTAGLGW 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 + LP+ I L +L+ D + Q + + A F + L+ Sbjct: 239 SVLPDSLIDD-----NLKILDLDNSPLKRQIGCLIHQDRTESNAASAFIKLLQ 286 >UniRef50_A0NTX9 LysR family transcriptional regulatory protein n=3 Tax=Proteobacteria RepID=A0NTX9_9RHOB Length = 342 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 109/288 (37%), Gaps = 7/288 (2%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 L F+ K +FS AA +SQPA S+++RALE +G+ L NR L L+E G+ Sbjct: 19 LSSLSGFVQAVKFGSFSAAAKHLGISQPAVSQQVRALEDELGIRLLNRTTRQLSLTEAGE 78 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIE 132 +++ R +L++L ++ + + + +L + + + Sbjct: 79 RYYAYARDILERLAEADRSVQSEEAQMSGPLSVGLPLGFAETVLSDFLIRFKLDHPGILL 138 Query: 133 AIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEALFN 189 + + + + + + D D+ + RL +Q V + D+ G Sbjct: 139 DVSLSDQFVDVIQQRLDVAIRM--GDIEDDRLIVRRLGLAQRCLVASPDYLDKRGRPAHP 196 Query: 190 LAQPHFPLLNYSR-NSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLP 248 L Y ++ + + S + + S L++ A+ G GIA Sbjct: 197 DDLKDHDYLLYKNISTGTRVPFISPVGEKLSVKISPTMLVNNSSTLRRAAMAGLGIALSN 256 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWREL 295 + I +R+G L V+ P +A + R P RF L Sbjct: 257 RWLIDPFLRTGDLEVVLPQWQYPPHPVHAVYPSNRFIPLKVRRFVDSL 304 >UniRef50_Q8TVB0 Transcriptional regulator of the LysR family n=1 Tax=Methanopyrus kandleri RepID=Q8TVB0_METKA Length = 304 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 113/297 (38%), Gaps = 10/297 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + + + F + + ++FS+AA + ++Q S +I +LE+ LF R ++L Sbjct: 1 MSDPRFSYFRTFREVVRQKSFSKAAEALGITQGTVSNQIASLERFFDARLFVRTPEGVEL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 +E+G+I I +L +E ++ S K++++ + LLP + + Sbjct: 61 TEEGEIALEAIETVLDAVERAKDKIAAVSKEPSGKVRVSTSTVPGGYLLPGSVKEFRSEY 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P I D EA + + G +D D + + + + +L + D Sbjct: 121 PKVDVIIRVCDSREATEHVLSGDADVAIVGTDAFVTRKSVEVVPIASEELVVILPPDHEL 180 Query: 185 E---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVAL 239 + P +N S R + + L H F +E + Sbjct: 181 ADAMEVSIDDIVGEPYVNRESGSGTRREVEKYLKSHGLGFEDFKIVEEVGSTEAVITSVS 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNP-VAERFWREL 295 G GI+ + E A ++ +G + + ++ YA + + ++ E FW L Sbjct: 241 QGAGISIISERAAKRAESAGLIRIARLEDRP-RRFFYALKSDKPLHASATEAFWEFL 296 >UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=Paenibacillus RepID=C6CYG5_PAESJ Length = 297 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 111/292 (38%), Gaps = 14/292 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L + + +NFS+AA +++QP+ S+++ LEQ +GV LF R ++L++ Sbjct: 1 MELRQLQYVIQIAIEKNFSRAAEKLHIAQPSLSQQLSKLEQELGVLLFRRTTNSVELTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLP---SIISQMPPLF 127 G++F + + +L +E E+ + + ++ + +LP + ++ P Sbjct: 61 GQVFVDKSQSILDAIEQLKQEMDDMAQMKRGRLVVGTLPITGSHILPLVLPVFGELYPQI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + G +D L++ + L E ++ Sbjct: 121 EVILVEDTTVKLEQLTANGGTDISLLTLP--LVDQTLEWEPLMEEEICLAVPPSHRLAGR 178 Query: 188 FN----LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + + + +++ L + + + + F SS E ++ + G G Sbjct: 179 TDEISIEELREEHFVGLKKGQGFRQILVH-LCQQAGFTPNIVFESSNIETVQSLIAGGMG 237 Query: 244 IAWLPEYAIQQEIRSGKLVV--LNRDELVIPIQAYAYRMNTRMNPVAERFWR 293 I ++P+ + G V L+ + A R ++ A F Sbjct: 238 ITFVPKMLTRA--AGGDFVPVYLSLKDRPSRTLIIASRKGRYLSKAAVAFIE 287 >UniRef50_C8P2K3 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2K3_ERYRH Length = 300 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 122/296 (41%), Gaps = 13/296 (4%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + F+ + + +FS+AA + +Q A + +I+ LE+ + +LF+R + L+E Sbjct: 4 HMNLRHFQTFVKVVEKESFSKAADALGYTQAAVTIQIQQLEEELQTKLFDRMNRKIHLTE 63 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPL 126 +G+ F +L+ +E + I++ SL + P +I P Sbjct: 64 EGEAFIFYANEVLRTVEEARI-FNQSAKKEHGTIRVGTVGSLGSSVFPELIYNFHREHPN 122 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFE-SQLFPVCASDEHGE 185 + +E + +R + D +F+ D D +++FE + ++D Sbjct: 123 VEIKVIIGKTEELLGMVRRNEIDILFTL---DYQIYGADMVKVFEKEESILFVSADASVS 179 Query: 186 ALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + F P L + + R+L + + + +E++ V G Sbjct: 180 STKTYNLEEFSDAPFLLTEQGEAYRYELERSLAK-RRVDLNAILEVGDTEIIIAVLKKGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 G+++LPE+++++E+ L + D + + A Y + + F +E+ + Sbjct: 239 GLSFLPEFSVKEELEQQILKEVRVDIPSVSMYAQVLYHKKKFLTTHMKAFIQEIDQ 294 >UniRef50_Q394R6 Transcriptional regulator, LysR family n=13 Tax=Burkholderia RepID=Q394R6_BURS3 Length = 332 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 13/298 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DFL+L ++FS+AA +R+++Q AFSRRI ALE + +L +R + P+ L+ Sbjct: 1 MEAKWLEDFLSLADTKSFSRAARNRHLTQSAFSRRIAALETWMDAKLVDRSINPITLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQR--KIKIAAAHSLSLGLLPSIISQMP---P 125 G++F +L+ + + + G +A ++ A AH+L L P + Q+ Sbjct: 61 GQMFRGLAADILRSMYAARNLVNGYDQFAASDQVVRFAVAHTLVFTLFPEWLKQLNGEVG 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL----EAPFDHIRLFESQLFPVCASD 181 T + A++V E V +L EG+ D + +H L F + L ++ PV D Sbjct: 121 HVTARVNAVNVPEGVQQLVEGECDLLLGYHHPQLPIVLDPNHFPFVSLGVERILPVSTPD 180 Query: 182 EHGEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSF-STFFVSSMSELLKQV 237 G+ +F L PLL YS +++G ++ L +E F + MSE LK + Sbjct: 181 ARGKPVFQLPGTPDAPLPLLAYSSGAFLGNIVEMLLLNATEPYVLHRCFETHMSEALKGM 240 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 + G GI WLPE + +E+ G LV + V ++ YR + AE+ W + Sbjct: 241 VVAGHGIGWLPESCVAKELAEGTLVCAGSGDWVTELEIRLYRSARKRGLAAEQLWTYI 298 >UniRef50_C5EQQ1 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EQQ1_9FIRM Length = 299 Score = 239 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 112/291 (38%), Gaps = 10/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + FL + + ++FS+AA SQ A + +++ LE+ + V LF+R L+ Q Sbjct: 1 MELREIATFLQVAQLKSFSKAAKQLGYSQAAVTIQVKQLEKELNVHLFDRIGKQTTLTHQ 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G +F +++ LE + ++ + + S+ + P ++ + P Sbjct: 61 GVVFFEHAAAIMRDLECARDAVTEATEL-TGSLCLGTIESICASIFPPLLKEYHRLYPRV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +I +D + D F D+ + + + + + V + Sbjct: 120 NVSIITDSPGTLLDMMNSNAIDI-VYFLDKRMYDDKWIKVLEEPEDIVFVSSVKHPFSGR 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +L P P + +N+ ++ + L +++ F +E + + G+ Sbjct: 179 KDLELPQVIGQPFILTEKNASYRFILEQYLAAQ-DMTIRPFLEIGNTEFIINLLRANMGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRE 294 ++LP + I +I SG L LN + + Y + + F Sbjct: 238 SFLPRFTILSDIESGCLAALNVKDFHMQTWRQIVYHKDKWVTREMNAFIEL 288 >UniRef50_P73778 Transcriptional regulator n=5 Tax=Cyanobacteria RepID=P73778_SYNY3 Length = 302 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 10/294 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + F+ + +FS AA + +QP S++I ALE+ +GV L R T L L+E Sbjct: 1 MDRLACMQSFVRAIEMNSFSAAAREQQTTQPTISKQIAALEKYLGVRLITRSTTKLNLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 +GK ++ + +L+ + A L G + A +++ + + +S + Sbjct: 61 EGKQYYQYCQQILETVAEAEASL-EGKEKAVGTLRLGCSVLFGEMQIVPRLSLFIARYPQ 119 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGE 185 I+ + D VD ++EG D + + R+ ++ V ++ ++ GE Sbjct: 120 VKIDLMMADYFVDMVQEG-LDLAIRIGNHQ--DKALISERIGITRRVTVASTSYFEKSGE 176 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + Y+ S + ++ F ++ S ++ L GIA Sbjct: 177 PKTPEELTRHNCIVYTSLSTINEWHFHGKNGVIAINVKGSFQTNSSVAVRAAVLSDLGIA 236 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELREL 298 P + +I G L V+ +D +P YA +R P F LRE Sbjct: 237 IAPIWMFGDDIYQGNLKVVLQDYQPVPFPIYAVYRRSRFYPAKVHCFIDFLREE 290 >UniRef50_A9KT60 Transcriptional regulator, LysR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KT60_CLOPH Length = 292 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 116/292 (39%), Gaps = 12/292 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + F+ + +C +AA +SQPA S+ I+ LE+ V+LF R L ++E Sbjct: 1 MTIRHFKIFIAVVECGKMRRAAERLYISQPAISQAIQELEEHYQVKLFERLSQKLSITEM 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ R ++ E+ ++ + ++ I++ + S+ +L ++ + Sbjct: 61 GELLLPYARQAVELFENTEQAMKNAGEVSR--IRLGTSISVGTTILNDLLDRYEEIYGNL 118 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ + + + D + +++ I + E +L V Sbjct: 119 DTSVIIHNTQTIETLIHSCKLDLGIV--EGFVIDKGMKQIPICEDELVLVVGKSHPLYQK 176 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + L++ S + L +++ + + SE +K G G+ Sbjct: 177 EIITFEELQNEILISREEGSVNRNQFEQLLLE-RDITMQKKWTCTNSEAIKIAVEHGRGL 235 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWREL 295 A L + I++E+ G L +L +++ + + + Y + ++ ++F Sbjct: 236 AILSQMIIRKEVEEGTLKILQLEDIHVHRKIHLIYHKDKFLSKPLKQFIELC 287 >UniRef50_Q5NRI0 Transcriptional regulator, LysR family n=1 Tax=Zymomonas mobilis RepID=Q5NRI0_ZYMMO Length = 303 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 116/292 (39%), Gaps = 8/292 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+++ + ++ + A+ ++SQ A S I ALE V+LF+R + LSE Sbjct: 1 MTFEQLRIFISVAERQHMTAASQDLHLSQSAVSSAIAALENRYDVKLFHRIGRGISLSEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F + R +L+ E+ L+ + +++ A+ +++ LP ++ PL Sbjct: 61 GRLFLEEARSILRSAEAAEVMLKEIGGLKRGVLRLVASQTIASYWLPPLLLDFQKRYPLL 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + ++ ++ +G+ D F + ++ + + L V ++ + + Sbjct: 121 DLDVAIANSEQTALQVEQGRVDLGFV--EGEVDHPLLAQWPIGQDYLLLVRSTPFPEKDI 178 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELS--FSTFFVSSMSELLKQVALDGCGIA 245 + + S ++ L + T V +E ++ G GI Sbjct: 179 DADYLRSARWVVREKGSGTRSTFDQFLRLYGVDPDSLDTVLVLPSNEAVRTAVEAGAGIT 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 L + + +++G L + D P + ++ +RE Sbjct: 239 ALSSFVVTPALKAGVLHAADLDLKPRPF-FALRHKERYRSKASDALLDLIRE 289 >UniRef50_A9KNS0 Transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=A9KNS0_CLOPH Length = 294 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 122/297 (41%), Gaps = 10/297 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + + F+T+ NF++AA +Q + + +I+ LE+ +GV+LF+R + L+ + Sbjct: 1 MDIRLIIAFVTVATLHNFTKAADQLGYAQSSITSQIQLLEKELGVKLFDRLGKKVCLTPE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F R LL E L + I S+ LP ++ + P Sbjct: 61 GEQFLVDARQLLFSWEKAKGSLSLLKS-PHGILTIGVNESVCSVKLPKLLDEYRKRYPEV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + I+ DE L+E D D+ E L + + + + Sbjct: 120 EFHIKIGSSDELELWLKENLIDVAV-LLDKPWHVPELTVKIYQEESLGLFVSPNHPLDGV 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 N+ P+L S S + I + + + SF ++ LKQ A+ G GI Sbjct: 179 GNILPHDVSSHPMLLISH-SSCWKNIFQAVMEEANESFRIMLETASISDLKQFAVLGFGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELEI 300 A LP YA+ +EI S +L +++ + + + + ++P E F +++ Sbjct: 238 AVLPLYAVDEEIASNQLSMIDWKGKNLELFIQVVHHSDKWLSPSLEAFLVVCTDVKW 294 >UniRef50_Q5ZT74 Transcriptional regulator, LysR family n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZT74_LEGPH Length = 306 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 7/293 (2%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + LY F + + R+F++A S +++ SRRI LE +GV L +R L L++ G Sbjct: 4 DLNDLYFFYLVVEQRSFTKAGRSIGITKSKISRRISELESRLGVRLLHRSTRKLALTDIG 63 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLF-TWA 130 +IF+ + ++ + +S + + +I++ + II++ + Sbjct: 64 QIFYQHCKAMVDEAQSAQEAIELVQSKPRGRIRVTCPALFAQSTFTDIITRFMQQYQEVT 123 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEAL 187 I D VD +EG D F ++ +L S + + + HG Sbjct: 124 IVLNATDRPVDLFQEG-FDVAIRFQANTFEDSTLVVRKLGLSFSSLIASPTYLNHHGTPQ 182 Query: 188 FNLAQPHFPLLNYSRNSYMGR-LINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 + +RN M + L+ R + F S+ +LKQ AL GI Sbjct: 183 TPQDLVNHACFAKTRNEGMSQFLLTHNDGRQISVHFQPILESNEWLVLKQAALSHLGITM 242 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELREL 298 +P+ ++EI SG LV + + + Y + R + P F + E Sbjct: 243 MPQEICRKEIDSGLLVPILTEWSLPKASLYIIYPSRRGLIPAIRSFIDFVAEE 295 >UniRef50_C0D9J1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9J1_9CLOT Length = 299 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 119/293 (40%), Gaps = 10/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + F+ + + +NFS+AA SQ A + +I+ LE+ + +LF+R ++L++ Sbjct: 1 MEIRNIITFVRIAELQNFSKAARQLGYSQSAVTMQIKQLEEELHAQLFDRIGKHIRLTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ +L + + + +++I A SL + +LP +I + P Sbjct: 61 GQRLLPHALEILDGVRRA-QSITREPEEVSGRLRIGTAESLLINVLPPVIIEFSCLYPRV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + V + ++ + D F D + + V ++ Sbjct: 120 EVSTQTASVADLFAMVQRNEIDL-LYFLDRKTNFPEWIKVAERPEPAAFVASAQSRLAGQ 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ P L + + + L + F + ++++ ++ L+ GI Sbjct: 179 RQISLERLLEEPFLLTEKGISYRYAMEQVLAESG-MEIHPFLETGNTDIITKMLLENRGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVI-PIQAYAYRMNTRMNPVAERFWRELR 296 ++LPE+ ++ I+ G+L VL+ I Y N + P ERF + Sbjct: 238 SFLPEFVVRDYIQDGRLAVLDTVCPEICMWSQLVYHKNKYLTPQMERFTELMV 290 >UniRef50_A3QF96 Transcriptional regulator, LysR family n=10 Tax=Gammaproteobacteria RepID=A3QF96_SHELP Length = 304 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 114/291 (39%), Gaps = 9/291 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + F + + +F++AA +S S+ + LE+ + V L NR + ++E G Sbjct: 5 RIDTMKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRVNVTEAG 64 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WA 130 + + + + +L +E L S+ A +K++A S + LPS + Q Sbjct: 65 RAYFERCQQVLIDIEEMDNALTNLSETASGLLKVSAPMSFGIHHLPSALVQFQQQHPDVR 124 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGEAL 187 ++ D+ VD L +G D L + +L +L + + E GE Sbjct: 125 LDITLTDKKVDLLEDG-VDVALRI--GQLTSSSLIAKKLTPIKLVVCASPEYLAERGEPK 181 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 H L++S S +G R S L + + ++L + A+ G GI Sbjct: 182 TPADLIHHNYLHFSY-SDLGAAFGRFGEHFSALKIPSDLACNNGDMLVEAAIAGRGIVVQ 240 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRE 297 P + + + +RSGKL + D P YA + F L + Sbjct: 241 PTFLVSKALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDALSQ 291 >UniRef50_Q1IQA4 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQA4_ACIBL Length = 300 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 118/299 (39%), Gaps = 11/299 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L FL + + +FS+AA R +QPA S +IRA+E+ +G +L +R + ++ Sbjct: 1 MDFDQLETFLAVARLSSFSRAAEQRFRTQPAISAQIRAMEEEVGAKLLDRSGGRVSVTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F + L+ ++ L+ L+ + + ++ +AA + L +LP + +Q P Sbjct: 61 GKHFLKYVEEALEARKNVLSALKEMDEVPRGEVVVAANEATCLHVLPEVFAQYKKQYPRV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 I + + +D + D + + + + +L + Sbjct: 121 GVNIRRSEHAKILDAVNFNAVDFGVVSLP--VSDKRLSVVPIHREELVIMTPPGHPLSKR 178 Query: 188 FN---LAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + +PLL + L + EL+K+ GI Sbjct: 179 KSALIADAAQYPLLLPKLG-RTRDSLESVF-EERHLEVNVSMELDSVELMKRFVAANLGI 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRELEIVL 302 ++ + I +++++G L + + I + YR + ++ A+ F +L+ Sbjct: 237 GFIAKSNIVEDVKAGVLCEIAIADAHIRRELALVYRKDKVLSRAAQAFIDIAVKLKSPA 295 >UniRef50_B0PHZ7 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHZ7_9FIRM Length = 309 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 111/294 (37%), Gaps = 13/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L F + +FS+A ++QP S IRALE+ +GV+L R + S + Sbjct: 1 MDFKQLEAFAAVVNLGSFSKAGDRLFLTQPTISAHIRALERELGVQLIVRTTKEVYPSRE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK F++ +++L+ + +A + + I +AA+ + +LP ++ P Sbjct: 61 GKRFYAYAQNILRMRDDAIAAMTEAVPVVRGVITVAASTIPAQYILPDAMAAFCKSYPHA 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCA-SDEHG-- 184 + D + +G++D + + + +L V + ++ Sbjct: 121 VFRHICCDSAGVERLVADGEADIGMTG--ALMSGSRCSWHDFAGDELVVVTPNTPQYSVF 178 Query: 185 --EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVALD 240 E + P + S R R L E +K+ Sbjct: 179 LKEGIPPEVLLREPFIQREAGSGTRRAYERFLAAAGINTEQMRVVAELEDPESVKRSVAR 238 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWR 293 G GI+ L AI++ G L+ L VI + Y R R++ VA F Sbjct: 239 GLGISILSRRAIEEFCSFGLLLALPLTTGVIERRLYIGCRKGARLSSVARTFLD 292 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 115/301 (38%), Gaps = 10/301 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 N + L FL + + FS+AA + ++Q A SR + LE+++GV L +R + L+ Sbjct: 1 MNYTLRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII---SQMPP 125 G+ + LL QL+ L + R ++ + ++ IA A ++S L+P + + P Sbjct: 61 HAGQALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + + ++++R G D L+ L VC D Sbjct: 121 EIRLTVRDNVQADGIEQVRAGGVDFGVLIDP--LVHDGLTIEPLVTDPFCFVCRRDHPLA 178 Query: 186 ---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 + A L+ S LI+R RH + S + + G Sbjct: 179 QEKTVPWSALDGMRLVLLDFASGSRPLIDRVFGRHGIV-PRVVQELGHSASVFGMVEAGI 237 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVL 302 G + LP Y++ + LV R + ++P AE W +R L I Sbjct: 238 GASVLPTYSL-PLPAASPLVWRPLVPREERRIVMVRREDRSLSPAAEAVWALVRNLTIKA 296 Query: 303 S 303 + Sbjct: 297 A 297 >UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUF5_9CLOT Length = 302 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 106/296 (35%), Gaps = 12/296 (4%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ + L FLT+ + + + AA +QP+ S IR +E+ GV+LF+R L L+ Sbjct: 1 MDVTLRHLRIFLTVCEAGSMTGAANRLFTAQPSVSLAIREMEEYYGVKLFDRISKKLFLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSI---ISQMPP 125 E G RH++ + E+R +++ A+ ++ LLP ++++ P Sbjct: 61 EAGHQVLEYARHIIALFDEMEQEVRNPD--MSGTLRVGASITVGTFLLPGYVKELTRLYP 118 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + + + + D + +L VC Sbjct: 119 ELRVEARIENSNNIEKCVLSNEIDLGVI--EGIAHSRYISSESFHGDRLAFVCPPGHRFA 176 Query: 186 ALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 ++ + + S + + L EL + S+ ++ + G Sbjct: 177 GKQDVKLGDLQSESFILREKGSAGREIFD-GLAAAHELDIRIAWQSTSNQAIIHGVAAGF 235 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELRE 297 G++ LP + + G + + + L + + Y N + A R +E Sbjct: 236 GLSVLPASLAAEGVERGSIAEFSVEGLSMERKFCVIYHKNKFLARGARELIRLFKE 291 >UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46WQ0_RALEJ Length = 304 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 109/293 (37%), Gaps = 9/293 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 N+ + L F+ + + R+F++AA ++SQ + S I LE +G++LF+R L ++ Sbjct: 7 MNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEDNLGLKLFDRHTRQLHIT 66 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 + G+ ++ + ++S + + ++ IAA+ + +LP I + P Sbjct: 67 QAGEELLPLVKKAVADIDSAIETSSELRTLGRGRVSIAASSIQAALMLPRFIREFSLGHP 126 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 I + E + G+ D E + RL V D Sbjct: 127 GVKVDIHDVSEHEVPKMVSSGEVDFGIGTIPEG--QPDLTAHRLSTDPFVIVMPPDHPLL 184 Query: 186 ALF---NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 PL+ + + + ++ L ++ S + + + G Sbjct: 185 RRKTLRWEDVAPIPLIGPHKGNPIRDCLDTALA-ARGITLSRLHEVLLPLTMVGMVEAGL 243 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 GIA + + G V+ D ++ + + ++P A+RF L Sbjct: 244 GIAVMSAAVTRLTEALGLATVMPTDPVIHREISLLVHADRSLSPPAQRFRDLL 296 >UniRef50_Q2SMQ7 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMQ7_HAHCH Length = 330 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 115/293 (39%), Gaps = 9/293 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ L F+ + + +F++AA +S+ +RR+ ALE +GV L R + L+ Sbjct: 27 MDKLAGLTAFVNVAEAESFAKAAREMGLSRSQVNRRVIALEDELGVTLLARTTRHVSLTP 86 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 G+ F+ + + +L L ++ Q +KI A S L S ++ + Sbjct: 87 TGQAFYLRAKSILNDLREAETAIQSDHAEPQGDLKINAPMSFGTMHLSSALADFMTRYPN 146 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 + + D VD + EG D + + E++ + +HG Sbjct: 147 IRVHLVLDDRFVDPVSEG-FDITVRVAETR-EAPSLIEHTIVEAKRLLCASPGYLQQHGR 204 Query: 186 ALFNLAQPHFPLLNY-SRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 P L+Y + S + R + + + + +E L+ A+ G G+ Sbjct: 205 PRTIKELASRPCLHYGNLASGYTWRLRRGDAPETSVRVNGVLCCNNAEALRDAAVAGLGV 264 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 A LP + E+++G+LV + + P+ Y N + F + ++ Sbjct: 265 ALLPTFIAGPELQTGRLVSVLPEYQAPPVYLSLLYPPNRHLAARVRVFVKFMQ 317 >UniRef50_Q1J2L5 Transcriptional regulator, LysR family n=2 Tax=Deinococci RepID=Q1J2L5_DEIGD Length = 299 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 110/290 (37%), Gaps = 5/290 (1%) Query: 14 KWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKI 73 + L F + + + S AA ++QPA S +++ L A+G LF R T + L+ G+ Sbjct: 5 EHLLTFARVARLGSLSAAAEELYLTQPAVSHQLKLLTHAVGEPLFRRHRTGVHLTAAGEG 64 Query: 74 FHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLFTWA 130 + L + LE ++ + + +AA+ +++ LLP +++ P T+ Sbjct: 65 LLPHAQALARALEGAQHYVQELRGLERGVLSVAASSTIAAALLPRVLTAFHSQYPEVTFQ 124 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNL 190 + + E +D L+ GQ + L E +L V A Sbjct: 125 VRQGNTREVLDALQSGQVELALIEGPPGPLGPHLQARAFGEDELILVIAPTHPLAQAGLQ 184 Query: 191 AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEY 250 PL+ S + + L L T +E +K+ + G G A+LPE Sbjct: 185 GVATLPLVWREHGSGTREVAEQALAGAG-LQTRTVLELPGTEAVKEAVMGGLGAAFLPER 243 Query: 251 AIQQEIRSGKLVVLNRDELVIPIQAY-AYRMNTRMNPVAERFWRELRELE 299 + +E+++G L L + +++ A F L Sbjct: 244 RVHREVQAGLLTRLELTLPGLRRPLIQVTPPPEQLSQAARTFLNLLHRQT 293 >UniRef50_A8RZ62 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZ62_9CLOT Length = 290 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 120/291 (41%), Gaps = 10/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + F+ + + ++FS+AA SQ A + +I+ LEQ + V LF+R L+ Q Sbjct: 1 MELREIAAFIQVAQLKSFSKAAKQLGYSQAAVTIQIKQLEQELNVHLFDRIGKQTTLTHQ 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G +F+ ++++LE + S+ + + S+ + P ++ + P Sbjct: 61 GALFYEHAVSVMKELEHARDAVTHVSEL-TGSLCLGTIESICATIFPELLREYHRLYPKV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + ++ + D F D+ + ++ + + + V AS Sbjct: 120 NVRLITDSPETLLEMMNSNAIDI-VYFLDKRMYDSKWIKVLEEPEDIVFVTASGHPFVGR 178 Query: 188 FNLAQP---HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 +L P + RN+ ++++ L + F +E + + G+ Sbjct: 179 DSLDLDLVIDQPFILTERNASYRFILDQYLAAQGK-EIHPFLEIGNTEFIISLLRKNLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQ-AYAYRMNTRMNPVAERFWRE 294 ++LPE+ I Q+I +G+L VL+ + + Y + + + F R Sbjct: 238 SFLPEFTIHQDIINGELAVLDVRDFYMRTWRQIVYHKDKWVTREMDAFLRL 288 >UniRef50_A6NX65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NX65_9BACE Length = 304 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 109/291 (37%), Gaps = 12/291 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 I + L FLT+ + RN S+AA VSQP S+ I LE+ LF R L L+E Sbjct: 2 ITIRHLKIFLTVAETRNMSEAAARLYVSQPTVSQTIGELEKMYKARLFERYPKELFLTEA 61 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ +Q ++ + ++G + ++I A ++ +L I+ ++ P Sbjct: 62 GRTLRAQALLAVEAFDRLDEVMKGEGERPS--LRIGATLTVGSTVLCPILDELRSVRPNV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +++ + KL + + D + + + L VC+ D A Sbjct: 120 DLSVQVDNTRTIESKLLQNELDAAIV--EGIIHREEILSSPIISDCLILVCSPDHPFAAR 177 Query: 188 F---NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 P + + S L + R L + + S + +KQ + G G+ Sbjct: 178 KSVEPEELAAQPFVLREQGSGTRALFESFMAR-RRLPLNISWECSSTAAIKQAVMRGYGL 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRE 294 A L + E+ G+L +N + Y N ++ RF Sbjct: 237 AVLSARLVSGELSRGELKRVNVEGCAWQRSFLLCYHRNKVISDTLRRFLDI 287 >UniRef50_Q3A916 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A916_CARHZ Length = 302 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 120/294 (40%), Gaps = 10/294 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + F + K R+F++AA +++QPA S +++A+E G +LF R T ++L+ Sbjct: 1 MNLYQFELFCQIAKVRSFTKAAKLMHLTQPAISAQVQAMENFYGTKLFERSATGVKLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + +H L + E E+ + I I A+ ++ LP + P Sbjct: 61 GELVYKYAQHFLAEHEKLEREIDNLLGTNAQTIVIGASSTIGNFALPCNVWSFKEKYPEA 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 IE + + +D + E + D + + + ++ ESQ+ + + + Sbjct: 121 NIRIEVDNSKKVIDMVMEDKVDFGLAEGP-EFTHPDLEVKKVGESQVVIITSPELPLARQ 179 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVALDGC 242 ++ PL+ S + + + + + + + + G Sbjct: 180 DSITVEELKKLPLIMREPGSSVREVFFDAIKKAGVPAKELNIVLELGSFQGVLEAVKKGH 239 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL 295 G++ AI++E +L L ++ + + YR + +P+A+RF R + Sbjct: 240 GVSISCLEAIKKEFHRKELHYLTLKDMELTMPFLLVYRKDRAFSPLAKRFLRFI 293 >UniRef50_Q2BLK0 Transcriptional regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLK0_9GAMM Length = 296 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 116/292 (39%), Gaps = 10/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + ++ F+ + + +F+ AA + + SRRI LE +GV L NR L ++ + Sbjct: 1 MNLNDVHLFIQVIEHNSFTSAAEKLGIQKSTISRRIAQLEDELGVRLLNRTTRKLSMTNE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-W 129 G+ + R LL++LE+ + + +++I L + ++ +S + Sbjct: 61 GEDLFKRCRPLLEELENVEHSVTSRQSEPKGRLRITMPPELGIFIMNDAVSSFIKRYPQI 120 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEA 186 I+ VD + EG D DL ++ ++ ++ + D++GE Sbjct: 121 QIDIELSVRVVDLVEEG-IDLALRV--GDLSDSSLIARKISDAHAHLYASQDYLDKYGEP 177 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 + + NS + + + ++ K + L+G GI Sbjct: 178 ETPDDLINHQCIGIKLNST--DWVFENWNDGKPVPVNFRIRANNLTFCKDMLLNGLGIGR 235 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELRE 297 +P ++E+++G++ + + + +A + R +NP F + E Sbjct: 236 IPNGFFEEELKTGEVKQILTEYRTPTVGIHALYPSRRHLNPKVRLFIDHIVE 287 >UniRef50_D1CCM2 Transcriptional regulator, LysR family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCM2_THET1 Length = 310 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 109/299 (36%), Gaps = 10/299 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + L + L +++ AA ++SQPA S++I+ALE A GV + R + + Sbjct: 1 MNLNQLRVLVALINRGSYTAAAEQLHLSQPAVSQQIKALETACGVPVVERVDGKIVPTYA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ + + +L E L G + + + A + + + P +I+ P Sbjct: 61 GEVLYRYAQSMLHIEEEAQHALAGIKAGVKGRFVVGANTTGGMYITPPLIAAYRKNHPET 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + L D + + + ++ + + + Sbjct: 121 EIIFRIEGTESLLAALANRLLDLAIVGGP--VTDKKLKAEPILPDRVVLITSPHHPLSSR 178 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + + S RLI L RH ++ + +E +K+ G G+ Sbjct: 179 QQIRAQDLANERFIIARYGSTTRRLIESRL-RHKGVNLHIAMEMAGTEDIKKAVEAGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELRELEIVL 302 A + ++++ +E+ +G L + +L I P AE F +R+ L Sbjct: 238 AMVSQWSVLREVAAGHLRQIEIVDLDIRRDYVMVTNPARYYTPAAEDFMDFVRQYAPQL 296 >UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIQ6_9GAMM Length = 301 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 11/291 (3%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 L F T+ K NF+ AA ++ A S++I LE +GV L NR + +E G Sbjct: 3 RLDSLIIFTTVVKANNFTNAAHQLGLTPSAVSKQISLLEDRLGVRLLNRTTRSVSPTEAG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WA 130 ++F ++ LL+ LE ++ + +KI+A + +L I +Q + Sbjct: 63 QLFFNRCSRLLEDLEEAEHMVKDLETSPRGTLKISATPTFGRAMLMKIFAQFLEQYPDVN 122 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGEAL 187 + D+ +D +REG D H L ++ + ++ V + + EHG+ Sbjct: 123 FDLTLADKGLDLVREG-IDLAI--HLGSLQDSRLVARPVARQKVILVGSKEYLAEHGQPE 179 Query: 188 FNLAQPHFPLLNYSRN--SYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + + R I R + + F + + L + AL+G G+A Sbjct: 180 ALNELVNH-FILMVSGIDFAEPRWIKRFIKEAGLSNKDRRFTVNDLDTLCEAALNGMGLA 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 LP Y I++ + SGKLV + D + N ++ + F + Sbjct: 239 ALPVYMIREHLDSGKLVHILPDIHFPVRTIHVVYPENRYLSAKSRAFVDFM 289 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 111/301 (36%), Gaps = 15/301 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + + L + + R+FS+AA +++QP+ S++I LE+ +GV LF+R ++L++ Sbjct: 1 MELRQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F + L+ E E+R + K+ + + +LP ++ P Sbjct: 61 GQRFIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + L G+ D + + + I ++F ++ Sbjct: 121 ELQLMEETSSHLEQLLVRGKIDVSLLTMP--ISDPSLEIIPAINEEIFLAVPANHPLAKR 178 Query: 188 FNLAQ---PHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + P + + R L + F SS + + + G G+ Sbjct: 179 KEVDLAEVADQPFILLKEGQGFRTISLR-LCEQAGFRPRIVFESSNIQTAQSLVAAGMGL 237 Query: 245 AWLPEYAIQQEIRSGKLVV---LNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIV 301 ++ P+ + G + + AYR + ++ AE F + L E Sbjct: 238 SFAPKMIT---LAPGTIEPPTYVRIKTKPSRTLVVAYRKDKPLSRPAEAFVQCLIEQGGK 294 Query: 302 L 302 + Sbjct: 295 I 295 >UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCX0_GLOVI Length = 301 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 119/301 (39%), Gaps = 12/301 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + + L F+ + + NF++AA ++SQPA S + ALE V LFNR ++L+ Sbjct: 1 MNFEQLRVFVAVAEHLNFTRAAEKLSLSQPAVSSAVAALETYYKVPLFNRMGRRIELTNS 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++ ++ ++Q++ + ++LR + ++ I ++ +++ LP + + P Sbjct: 61 GQLLLTEAHKVIQEITTIESKLRETKSLQRGELYIGSSQTVASWWLPPQLQRFRQQYPKV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + +E + + GQ D + ++ + ++ V Sbjct: 121 QLKVVSGNTEEIGEWVAAGQVDIGLV--EREVRNKSLTFNAIGGDKMAFVVGKQHPLWER 178 Query: 188 FNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSE--LSFSTFFVSSMSELLKQVALDGC 242 N+ + S + + H+ + K+ A G Sbjct: 179 TNIGLDELKSTRWVLRESGSDVRKFFEYLCFTHNIDADKLDIALELPNCAMTKRAAEVGA 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVI-PIQAYAYRMNTR-MNPVAERFWRELRELEI 300 G+A L +++EI+ G L LN + Y N++ +P + F +R+ Sbjct: 239 GVALLSVPLVEKEIKWGALRSLNTVLKPVMERNFYLISRNSQVTSPAVKAFSSLVRQSTP 298 Query: 301 V 301 V Sbjct: 299 V 299 >UniRef50_C0GDQ1 Transcriptional regulator, LysR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDQ1_9FIRM Length = 301 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 111/305 (36%), Gaps = 19/305 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E L F+++ R+FS+AA +SQP S I++LE+ +G LF+R T L+L+ Sbjct: 1 MEFYQLEAFVSVAAERSFSRAAEQLYLSQPTVSAHIKSLEKELGTSLFDRGKTELKLTGA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G + + R +L S + +R S+ + + +AA+ LLP I+ Sbjct: 61 GSVLYRFAREMLALRLSAVDSIRDSSEIGEEALTVAASSVPCQYLLPRAIAAFKELHNRV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---- 183 + + E + + E + + L E +L +H Sbjct: 121 NIKLTQKNSKETCEDVFNYHVPVGVVG--EKIKRPHLEFAPLLEDELVVAVPHKQHYSEL 178 Query: 184 --GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS----ELSFSTFFVSSMSELLKQV 237 E++ +L S L + + + E +KQ Sbjct: 179 LAKESVSLNDLSGHKMLLREPGSGTRSHFESELVKANASTEMFQVTI---FDNQETIKQA 235 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRELR 296 G G+ + Y + ++ G L + +L + Y + R ++P ++ L+ Sbjct: 236 VRQGLGLTVISRYVVSDYLQFGILATRSITDLNLKRSFYLVSHSKRILSPASKALLDHLK 295 Query: 297 ELEIV 301 Sbjct: 296 TFPWE 300 >UniRef50_Q1ZDZ8 Transcriptional regulator, LysR family protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZDZ8_9GAMM Length = 316 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 116/297 (39%), Gaps = 13/297 (4%) Query: 7 ILHNI--ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTP 64 ++ N+ L F + K N+++AA ++QPA S +++ LE + + LF++ Sbjct: 1 MVKNMRATLHQLKIFRQVSKLMNYTKAAKILGLTQPAVSIQLKLLETNLDIVLFDKIGKK 60 Query: 65 LQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP 124 L L+ G + ++ L + L + I+A S + P ++ Sbjct: 61 LFLTPAGDVLNTFCDTLFVSFTNIDMTLSAMKGTLEGDFHISAVSS-AKYFTPHLLGAFH 119 Query: 125 ---PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD 181 P +E + ++ + +L + D + + E ++ + + Sbjct: 120 KRYPKVNLYLEVANREQILQRLHNNEDDLVIMGLVPE--ENSLTCHPFIDNPIVAIANPG 177 Query: 182 EHGEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVA 238 N+ A + LL+ + S + + ++ ++L + +E +KQ Sbjct: 178 HPLANQKNIPLSALSQYKLLSREKGSGTRKALEHFFSK-NKLDIKPSMILGSTETIKQAV 236 Query: 239 LDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWRE 294 + GI+ L +++ E+ + LV L+ + + Y + ++P+A+ F Sbjct: 237 MADLGISALSRHSLTLELATNCLVELDIEGFPLLKSWYIVHHKDKNLSPIAKAFIEF 293 >UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulator yeiE n=127 Tax=Proteobacteria RepID=YEIE_ECO57 Length = 293 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 110/293 (37%), Gaps = 13/293 (4%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 +I + L F + K + +QA+V +SQ A S + LE +GV+LF+R L ++ Sbjct: 1 MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 E G++ + + L LE + E+ I+I A+ ++ +LP++I++ P Sbjct: 61 EHGRLLYPRA---LALLEQAV-EIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYP 116 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + + + + + + + D F + E +L A Sbjct: 117 QLPIELSVGNSQDVMQAVLDFRVDIGFI--EGPCHSTEIISEPWLEDELVVFAAPTSPLA 174 Query: 186 --ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + P + R S +++ L H F SE +K G G Sbjct: 175 RGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLP-KFEMAMELGNSEAIKHAVRHGLG 233 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRD-ELVIPIQAYAYRMNTRMNPVAERFWREL 295 I+ L I+ ++++G L + ++ + ++ RF Sbjct: 234 ISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYC 286 >UniRef50_Q0B264 Transcriptional regulator, LysR family n=8 Tax=Burkholderia RepID=Q0B264_BURCM Length = 321 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 92/298 (30%), Positives = 152/298 (51%), Gaps = 11/298 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KW+ DFL L + ++FS+AA RNV+Q FSRRI++LEQ IG EL +R P L+ Sbjct: 18 MEIKWIEDFLALAQYQSFSRAAEFRNVTQSGFSRRIQSLEQWIGAELIDRSSFPPVLTPA 77 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL---F 127 G++F +L +L A +R A + ++IAA H+++L LP + + P Sbjct: 78 GRLFRETAEDVLSRLFDTRAIIRTEQRIAGKSLQIAAGHTIALSFLPGWLKALAPHFGEV 137 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL----EAPFDHIRLFESQLFPVCASDEH 183 + +V +++ L G + +F++H +L A + H+ + L P C + Sbjct: 138 RARVIPTNVHDSILMLVNGNCELMFAYHHPELPLHLDPAKYAHLTVGLDTLMPACRPNRR 197 Query: 184 GEALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELS-FSTFFVSSMSELLKQVAL 239 F L Q PL++Y+ SY GR + L R + + S M+E+LK++ + Sbjct: 198 SAPAFRLPGTKQTPLPLISYTETSYFGRCLALLLGRAPDTPALQLHYESDMAEVLKKLVM 257 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 +G GIAWLP AI E+ +G+LV + ++ YR + + + W+ LRE Sbjct: 258 EGEGIAWLPRSAIAAELAAGELVPAGPAAWNLEVELRVYRDVSNRSEFLDTLWQHLRE 315 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 117/295 (39%), Gaps = 9/295 (3%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 + N E L F + + +F +AA + ++SQPA +RRI+ LEQ+IG L +R + Sbjct: 1 MSINCEILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVA 60 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM--- 123 + G+ +R +L++ + +L ++ + I +A + + LP++I Sbjct: 61 PTATGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTFGRD 120 Query: 124 PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 P I + +E + + G+ + + + L + D Sbjct: 121 YPHIRLRIRDLTANEGLQAVARGEVEFGINLMGNS--DPDLSFEPLIDDPFVLAMRKDHP 178 Query: 184 GEA---LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD 240 A + PL+ R+S L++ L R + L + F+ + + Sbjct: 179 LAAFDEIHWNQLEGHPLVVVDRSSGNRTLLDAALARAN-LRLNWFYEVTHLNTSLGLVEA 237 Query: 241 GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G GI+ LP A QE + + +V R + ++P A+RF L Sbjct: 238 GLGISVLPRLATPQEEHPFLVTRPIVNPVVTRTIGIVRRRSATLSPAADRFIDML 292 >UniRef50_A2SKW7 Transcriptional regulator, LysR family n=24 Tax=Burkholderiales RepID=A2SKW7_METPP Length = 342 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 106/296 (35%), Gaps = 11/296 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 L N + L F + + + S+AA +++QPA S ++ LE A G L R ++L Sbjct: 5 LRNATFRQLAAFNAVARLGSVSRAADEMHLTQPAVSIQLGILEDAAGTPLLRRSARGVKL 64 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 +E G++ +L + ++I A + + LLP ++ + Sbjct: 65 TEAGELLAGYASRILDLWGEAGDAMAAHCGDIAGLLRIGAVTT-AEYLLPPLLLEFVREH 123 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P ++ + + V++L D L+ + + V A Sbjct: 124 PQVKVKLQIGNRADVVNQLAGQDIDLAIMGRPPAELKT--ISAAFAKHPMAFVAAPSHPL 181 Query: 185 EALFNLAQPHF---PLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 LL R S + + +S + S +E +KQ+ G Sbjct: 182 MTTPKPGLAALNQANLLVRERGSGTRTTVEQLFKDAG-VSLTIGSEMSSNEAIKQMCAAG 240 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYR-MNTRMNPVAERFWRELR 296 G+A+L ++ E+ +G L +L + I + + A F + LR Sbjct: 241 FGVAFLSLHSCVLELETGMLAILPMPDCPIERDWHVMHLAGRPVPAAAAAFEQFLR 296 >UniRef50_Q0A8T5 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q0A8T5_ALHEH Length = 305 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 112/293 (38%), Gaps = 9/293 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + F+ + + +F A+ + SR++ LE + LF R L L+E Sbjct: 1 MDRLLAMEAFVAVVEAGSFVAASERLGRATSTTSRQVSELEAHLQARLFQRTTRRLTLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 QG++F+ + LL +LE AE+ G+ +++ A S L +I Q Sbjct: 61 QGQVFYRHCKDLLARLEEAEAEVGAGTGEPNGVLRVTAPVSFGTLHLAGLIPQFHARHPR 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 + D VD + EG D L +L + A + G Sbjct: 121 VHLNLSLDDRQVDLMGEGH-DLALRI--SRSLPEHLVARKLASVSIITCAAPGYLAQAGR 177 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 A L YS+ + + + ++ ++L+ AL G GIA Sbjct: 178 PERPEALQAHTCLLYSQAEPYRTWTYQGPQGPIPVRVGGYLTANNGDVLRAAALAGDGIA 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELRE 297 LP + ++ ++ +G+LV L D + P+ YA + R P F L E Sbjct: 238 QLPAFLVRDDLSAGRLVPLLPDYPLPPLGVYAVYPSRRYLPAKVRAFVDFLAE 290 >UniRef50_A8RJM4 Putative uncharacterized protein n=3 Tax=Clostridium RepID=A8RJM4_9CLOT Length = 304 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 10/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+T+ + +FS+AA +Q A + +IR LE +GV+LF+R + L+ Sbjct: 1 MELRQLQTFVTITQTESFSRAAEVLGYTQSALTVQIRLLENELGVKLFDRMGKRVYLTAP 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+ F +++ ++ E + + + SL LP I++ P Sbjct: 61 GRQFLGHANQIIRDIKCAR-EFAKSEEELCSPLHVGTLESLCFSKLPQILNSFRSSHPRV 119 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + A ++ +D + Q D D ++ + + V + Sbjct: 120 PVKVTASTPNQLIDMMERNQLDL-IYILDRPRYNDNWNKVMEVREPIVFVASPSCGLGGN 178 Query: 188 FNLAQP---HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ P +N R ++ L + + F S +E + ++ GI Sbjct: 179 RVISLEEIMDEPFFLTEKNENYRRELDCFLESQGMV-LTPFLEISNTEFIIRMIRKNRGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPI-QAYAYRMNTRMNPVAERFWRE 294 ++LP +A+Q+ ++ G+L VL+ + + + Q Y N + + F R Sbjct: 238 SYLPLFAVQEYVKRGELAVLDVADFRLAMYQQVIYNRNKWLTKEMDAFIRI 288 >UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LN85_RALME Length = 307 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 109/296 (36%), Gaps = 11/296 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 I + L + + + +AA + +++ PA S +I+ E+ +G+ LF+R + L+ Sbjct: 1 MQITFRQLRVVSEVARYSSVIRAAEALHLTAPAVSLQIKEAERQVGLTLFDRAGRRMTLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 G+ F R LL L+ + ++ I + + LP ++++ P Sbjct: 61 TTGEYFLVYARRLLATLKDAEDMMARFKRLESGRLTIGMVGA-ASYFLPQLLAKFHAEHP 119 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 + ++ ++ D + P V + Sbjct: 120 AVDVRLRLASREKLGVMMQGNDVDLCIMGRPPQ--DPPTRAEPFASHPHVLVVSPQHRFA 177 Query: 186 ---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 A+ +A + P + +S + + L H + + +E +KQ + G Sbjct: 178 RAEAVPAVALANEPFIVREPDSGTREALQKYLDAH-RIQPTFVMEMPSNEAIKQAVMAGM 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAY-RMNTRMNPVAERFWRELRE 297 G++ L + I E +G + V + + L + + +++P AE F + E Sbjct: 237 GVSLLSLHTIALEWSNGLIAVPHVEGLPLERRWNVVNIAAKQLSPAAEAFRYFVLE 292 >UniRef50_B2JVL8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVL8_BURP8 Length = 307 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 119/296 (40%), Gaps = 10/296 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + ++ + L F + +FS+AA +++QP S +++ LE +IG+ LF + + L Sbjct: 1 MLHLTLRQLRVFEASARHLSFSRAAQELHLTQPGVSSQLKQLETSIGMPLFEQVGRRVFL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 + GK +S R L QQL L D Q K+K++ + L +I++ Sbjct: 61 TAAGKELYSHTRLLQQQLSVLETSLDQLRDMKQGKLKVSLVSGTANPLALQLIAKFTRAF 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P ++ + + +++L ++D + +R+ + L + D Sbjct: 121 PGVRVSLSVGNRECVLNELASNETDLAIMGLPPE--GQGLAAVRVARNPLVMIAPPDHAL 178 Query: 185 EALFNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 +A L S R + R H +SF S +E +K G Sbjct: 179 VRERRIALDMLERETFLVRESGSGTRRAMERFFAEH-RVSFRPGMEVSSNEAIKWAVQAG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWRELR 296 G++ +P I E+ + +L VL+ + L I Y + +++ A F L Sbjct: 238 MGLSVVPLATIMAELETLRLKVLDVEHLPIVRYLYVVHRESKQLSTAASAFRDSLV 293 >UniRef50_B1ZVT1 Transcriptional regulator, LysR family n=3 Tax=Verrucomicrobia RepID=B1ZVT1_OPITP Length = 321 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 64/303 (21%), Positives = 127/303 (41%), Gaps = 10/303 (3%) Query: 4 CGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVT 63 + ++++ L F L +C++F+ AA ++Q A S I+ALE +G L +R Sbjct: 5 LSSASRPLDSRQLLAFAALARCQSFTLAAKELFLTQSAVSHAIKALEAEVGSRLVDRANR 64 Query: 64 PLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM 123 + L++ G+ F + +L+++E+ A L S + ++++ A+ + LLP+++ + Sbjct: 65 RVLLTQAGEQFLRHVEKILREMEAARAGLDALSRWGHGRLRVGASTTACQYLLPTVLREF 124 Query: 124 PPLFT---WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 F IE D V+ L+ + D E FD + LF+ +L + + Sbjct: 125 KQSFPKSVITIEPGDHATQVELLQSNRIDLAIMLQPET--RGEFDFVPLFQDELRLLTSP 182 Query: 181 DEHG---EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQV 237 E + ++ Y++ SY RL+ R ++ F + +K++ Sbjct: 183 VHAWVQQERTTPGSLAAETIVLYNKASYTFRLVTDYF-RQERMTIGHFIELGSMDAIKEL 241 Query: 238 ALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 G G+ L + + E+ +G LV + AY R+ E F R Sbjct: 242 VKIGVGVGVLAPWVARAELENGALVSFPLGRKRLRRTWGIAYLRGRRLPLGEETFIGLCR 301 Query: 297 ELE 299 + Sbjct: 302 SVT 304 >UniRef50_UPI00017446F7 LysR family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017446F7 Length = 293 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 111/293 (37%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ + F L + +FS AA N++Q A S++IR LE+ GV F R ++ + Sbjct: 1 MQLQIFKIFCDLVETGSFSLAAAKNNITQSAVSQQIRVLEEKYGVTFFERGGKKFSITPE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+IF R +L +S + L D +K++ +S+ L LP+ + + P Sbjct: 61 GEIFDRASREILSVYDSINSRLNELRDVVAGPLKVSTVYSIGLHELPAKLKKFRESHPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 IE D + +G++D + E ++ +CA Sbjct: 121 DVQIEYKRSPMIYDDVADGRADIGLVAFP--VRGKGIISDVFDEDEMVVICAPTHRLAKK 178 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL-DGCG 243 + + + ++ + I+R L H+ E +K+ G Sbjct: 179 RKVKLKELQGESFVAFDPDTPTRKAIDRALKGHAITFLQ-QHEFDNIETVKRAVEVAGV- 236 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWREL 295 I+ +P + +E+ G+L + ++ + R R+ P F L Sbjct: 237 ISIVPRRTVDKEVAEGRLAAVKVEDASLNRPLGILRKQARITTPAMREFMNVL 289 >UniRef50_A0LGP0 Transcriptional regulator, LysR family n=2 Tax=Deltaproteobacteria RepID=A0LGP0_SYNFM Length = 295 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 115/292 (39%), Gaps = 9/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F T+ NF+QAA N +Q S +I+ALE IG LF R +QL+E Sbjct: 1 MEMQRLQTFRTVAALMNFNQAANILNCAQSTVSAQIKALENEIGTMLFKRIGKSVQLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-W 129 G LL + LAE+RG + + + +++ LP I+ P F Sbjct: 61 GAKMLIYADKLLAIKDEALAEVRG-NKPGSGMLTLRMPQTMATYYLPHILRSYQPRFPGI 119 Query: 130 AIEAIDV--DEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 ++ ++LR D F F E + + L LF V Sbjct: 120 RLDITSCALHSLENELRIATVDLAFLFA-ESIGAKNLESEFLGSDPLFFVTYPGHPLSTR 178 Query: 188 FNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + LL + ++ +TLT ++ +T + E +KQ + G G+ Sbjct: 179 RRVDFKNLEGEVLLLPKSDCGYRMVLEQTLTAEK-VTPATIIEMNSIEAIKQAIMAGLGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 +PE A++ EI+ G++ + + + + P + F +R Sbjct: 238 TVIPEIAVRSEIKEGRIARIAWVDDLETGILMIRYRDKWCPPPLDAFMDMVR 289 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 109/301 (36%), Gaps = 19/301 (6%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L L + + +NFS+AA +++QP+ S+++ LEQ +GV+LF R + ++L+ Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G F + + ++ + E+ S ++ + + LLP ++ P Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + EG +D ++ + E + D Sbjct: 121 QVTLLEDTSLNLEKLTAEGGTDLSLLSLPLLEPTLSYE--PIGEEIIDLAVPPDHPLTKT 178 Query: 188 FNL--------AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 + + P + + ++ L R + + F S+ E ++ + Sbjct: 179 PGVLEQGVEMKQLENEPFIVLKKGQGFRKMTAD-LCREAGFEPNVVFESNNIETVQSLVA 237 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVL---NRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 G GI +P + + + +L+ AYR ++ AE F + Sbjct: 238 AGMGITLVPRFIARA--KRSELIPAYLPLAAPAPSRTLVIAYRKGRYLSKAAEAFIETFK 295 Query: 297 E 297 + Sbjct: 296 K 296 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 122/293 (41%), Gaps = 8/293 (2%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + + +QAA +V+Q A SR+I LEQ +GV LF ++ L L+ Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G++F S++ +L+ L+ ++E+ D Q +I++ +SL + ++PS++++ P Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + + G+ D F + L + Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAF-ISPFPENHDQVTGNVVLTEDLVAILPPGHPLAGE 179 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 ++ + +S+ + ++ + F ++ ++ + G G+ Sbjct: 180 QSIKLSQLKDEKFILFSKGYSLRPIVWHACLEAG-FTPKIAFEGEETDTIRGLVAAGMGV 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 + LPE A+ Q + V + V +R++ ++ VA+ F L E Sbjct: 239 SLLPEMALFQSFTLQPIRVRISEPKVTRTIGLIHRVDEKLPLVAQSFRMFLLE 291 >UniRef50_B6IYM5 RuBisCO operon transcriptional regulator n=1 Tax=Rhodospirillum centenum SW RepID=B6IYM5_RHOCS Length = 314 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 109/299 (36%), Gaps = 12/299 (4%) Query: 6 AILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPL 65 + N + L F + +F++ A ++ A S +I+ +E G LF R + Sbjct: 1 MSIRNATIRQLQIFAAAARTLSFARVAEQFRLTPGAISFQIKQIEGLCGFPLFERVGRSV 60 Query: 66 QLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM-- 123 L++ G +L++L ++ + + + + ++P ++S+ Sbjct: 61 VLTDAGAALLDHATVILKELNDADQQMEALRGSTGGSVTLGLVST-AKYIVPHLLSRFQA 119 Query: 124 -PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE 182 P T ++ + + + +G D + + + + A Sbjct: 120 ERPGVTITLQDGNRRKIHAAVIKGDVDIAIMGRPSAEV---VESVAFANHPSTIIAAPSH 176 Query: 183 HGE---ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 L + + S L++ R L+ +S +E++KQ + Sbjct: 177 PLTRGGRLRLHDLENERFIVREEGSGTRALMD-GFFRSQGLTPRIAMTTSSNEMIKQAVM 235 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNT-RMNPVAERFWRELRE 297 G GIA + + IQ E+ G L L+ + L + Y + + PV +F + ++E Sbjct: 236 AGIGIALISRHTIQLELAIGLLRELDIEGLPLMRAWYVVHRRSLPLLPVHSQFRQFMQE 294 >UniRef50_Q0BTZ4 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BTZ4_GRABC Length = 316 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 114/298 (38%), Gaps = 14/298 (4%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ + F+ + + +FS+AA V A SR I +LE+ +GV+LF+R + L+ Sbjct: 1 MDM-LATMQMFVRVVEFGSFSRAAGVTGVHISAISRGIASLEENLGVDLFHRSTRRVHLT 59 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT 128 E G+IF+ R +L+++E A + Q +++A + + + + + + Sbjct: 60 EPGRIFYQHARSVLREVEEARAAASAQQGHPQGLLRLALPDAFARLHIVPHMPEFLATYP 119 Query: 129 -WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHG 184 ++ D VD + G +D LL++ +L + + D Sbjct: 120 DIRLDMSFSDVRVDLIATG-ADAAIRIGP--LLDSSLIARKLAPHRRVICASPDYLDHRP 176 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTL-TRHSELSFSTFFVSSMSELLKQVALDGCG 243 L YS + + + + SE L+ AL G G Sbjct: 177 AIRHPEDLVQHNCLIYSLQPSGNWFFHHPISGEEVAVPVRGSIRADDSEPLRGCALSGLG 236 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDE-----LVIPIQAYAYRMNTRMNPVAERFWRELR 296 I LP + + ++RSG+L + D Y + ++ P F L+ Sbjct: 237 IVLLPTWLVGNDLRSGRLSPVLPDWNAMIATQPSGIFGLYPPHRQVPPKIRAFLDFLQ 294 >UniRef50_Q01QC4 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01QC4_SOLUE Length = 310 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 117/293 (39%), Gaps = 9/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L+ FL + + ++FS+AA + +QPA S ++R LEQ + +LF R + + L+ Sbjct: 1 MDFDQLHTFLEIVRLKSFSKAAQTCYRTQPAISAQVRQLEQELRADLFERFGSRISLTTA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 GKIF +L + + ++ IAA + + +LP + S+ P Sbjct: 61 GKIFSEYAEQMLDLRRRVQDAIAELETNPRGELVIAANEATCIYVLPKVFSEYRSQFPAV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + V+ + E +D + + E + ++ ++ + + + Sbjct: 121 QLQVLRSYGSRVVEAVMENSADFGLTQLP--VEEKRLQVVNVYRDEIRLIAPARHPLASR 178 Query: 188 FNLAQPHFP--LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + L + +N L E +E++K + G G++ Sbjct: 179 PVVTAQEVAEHFLVLPKYGKTRTRLNEWL-EAVEDEVRISMELDSTEMMKHFVIAGLGVS 237 Query: 246 WLPEYAIQQEIRSGKLVVLNR-DELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 ++ ++EI +GKL + E ++ YR + ++ A F + + + Sbjct: 238 FMAASNCREEIAAGKLRAVPLGPEPMMRRLGLIYRKDKALSKAALGFIQVVLD 290 >UniRef50_P30864 Uncharacterized HTH-type transcriptional regulator yafC n=94 Tax=Bacteria RepID=YAFC_ECOLI Length = 304 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 130/295 (44%), Gaps = 10/295 (3%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 ++ L F+++ + +FS+AA + A SR ++ LE +GV L NR L L+ Sbjct: 1 MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT 128 E+G+ + +++ +LQ++ + +E+ + + ++I AA + L L +I + Sbjct: 61 EEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERYP 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 ++ E + L E + D L ++ LF S + + D +G+ Sbjct: 121 EVTLSLVSSETIINLIERKVDVAIR--AGTLTDSSLRARPLFNSYRKIIASPDYISRYGK 178 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRL-INRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L ++ + + I R+ + E+ + S+ E LKQ+ L G GI Sbjct: 179 PETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKY--GLSSNSGETLKQLCLSGNGI 236 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDE-LVIPIQAYA-YRMNTRMNPVAERFWRELRE 297 A L +Y I +EI G+LV L D+ L + + A Y + ++ F L E Sbjct: 237 ACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSE 291 >UniRef50_Q3SFM8 Transcriptional regulator n=3 Tax=Proteobacteria RepID=Q3SFM8_THIDA Length = 313 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 102/291 (35%), Gaps = 12/291 (4%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + L F + + +F++A+ ++QP S +++ L + +G L + L+ G Sbjct: 6 TFRQLEIFEAIARLGSFTRASEELYLTQPTVSMQMKKLSENVGAPLIEHIGKRIHLTADG 65 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFT 128 + R + L+ + Q K+ + A + + P ++ + P Sbjct: 66 QQLAQATREIFAILDRFTMSVAERRGLKQGKLSLMAITT-ASYFAPRLLGEFAKLYPGID 124 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALF 188 ++ + ++ + + + D F + + + ++ + + A D Sbjct: 125 VSLRVTNKEQVLASIADNLDDLYFLGQPPE--DIDVIATPIMDNPIVVLAAPDHPLAHTR 182 Query: 189 NLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 + L + S I R ++ +E +KQ L G GI+ Sbjct: 183 KIPLEQLAKESWLMREKGSGTRNAIERRFAESG-IAVHPRLELGSNEAIKQAILAGLGIS 241 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWREL 295 L +A+ + + VL+ D I YA +++ A F L Sbjct: 242 ALSRHALALN-QPDQFAVLDVDGFPILRHWYAVYPAGRQLSVAARAFLDYL 291 >UniRef50_Q01QD7 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01QD7_SOLUE Length = 314 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 108/290 (37%), Gaps = 10/290 (3%) Query: 10 NIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++E + + + +F++A ++S PA +I LE +G +L+ R L L+ Sbjct: 6 SVELSHSRALVAVGELGSFNRAGERLHLSPPAIFAQIHQLEGEVGEKLYERTGRKLTLTP 65 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPL 126 G++ R LL + + +R S + + + +S+ ++P ++ + P Sbjct: 66 AGRLLIEYCRRLLVLHDEAVGAVRELSGVQRGSLHLGCGPHISVSIVPHLLRKFLSLHPN 125 Query: 127 FTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEA 186 + + D L G+ D I + + + L+ +L V ++ Sbjct: 126 VEVRLITGNDASLFDALHGGKVDLILMNLP--VEDTNLEQDPLWRYELVFVVPPNDPAAD 183 Query: 187 LFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 + + Y R + I R + + ++ +K++ G G Sbjct: 184 RKVISAPELATRRFILYQRTVVIETAI-REFCVSVGFEPNVVMQNDQADSIKELVKLGLG 242 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVI-PIQAYAYRMNTRMNPVAERFW 292 I+ LP +++ +E R G L +L + + YR + + Sbjct: 243 ISLLPLWSVSEEARRGSLCILRLANRQLFSVTGVLYRKSAYLPTAVRALL 292 >UniRef50_B7RLZ1 Transcriptional regulator, LysR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLZ1_9RHOB Length = 301 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 114/286 (39%), Gaps = 10/286 (3%) Query: 18 DFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQ 77 F+ + K ++F+ AA S ++ A S++++ LEQ + V+L NR + ++E+G +++ Sbjct: 9 VFIAVVKAQSFAGAARSLGITSSAVSKQVQNLEQDLQVKLLNRTTRNVSVTEEGAVYYEG 68 Query: 78 IRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WAIEAIDV 136 L+ L+ ++ + +KI+ SL I+ + ++ Sbjct: 69 AARALEDLQEAQEQIYELKSRPRGPLKISFPLSLGNKYFGQAIASFAAQYPEVDLDVSLD 128 Query: 137 DEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDE---HGEALFNLAQP 193 + VD + EG D L + R+ ++ HG Sbjct: 129 ERFVDIVNEG-FDLAVRI--GSLKDTSLVARRMASCPFVICASAGYLETHGTPQTPGDLA 185 Query: 194 HFPLLNYSRNSYMGRLINRTLTRH-SELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAI 252 +L ++ NS + + T ++S F + E+L AL G GIA LP + + Sbjct: 186 DHNVLAFTGNSGLHEWRYQDATGQIGQVSLRGNFKADSGEILCSAALQGVGIAILPVFYV 245 Query: 253 QQEIRSGKLVVLNRDELVIP-IQAYAY-RMNTRMNPVAERFWRELR 296 + +++ KL + D + P YA + N + F L Sbjct: 246 AKHLKTRKLQAVLPDYVTSPKRDIYAVFQPNRFQSTRLRLFVDHLV 291 >UniRef50_C5AVL3 LysR-type regulator of assimilatory C1 metabolism n=10 Tax=Alphaproteobacteria RepID=C5AVL3_METEA Length = 329 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 107/298 (35%), Gaps = 10/298 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + N+ K L + + ++AA NV+ A RIR LE+ G+ LF+R T L+ Sbjct: 1 MRNLSLKQLQAVAAVARLGTMTRAAQELNVTSAALYARIRQLEEEAGLLLFDRTPTGLKP 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---P 124 ++ G+ I + LE+ LR + S + P +I+ Sbjct: 61 TDAGREMLWAINSINTVLETCTDRLRTLKGGGGGR-VGLGVVSTAKYFAPLVIAGFMETH 119 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P ++ + + ++ LR D + + L + A D Sbjct: 120 PKVEISLTVGNRQDTIEALRNYDIDFAIMGRPPR--DFAIEAETFGPHPLVLIAAPDHPM 177 Query: 185 EAL---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 L S + + S +E LKQ + G Sbjct: 178 AGRRGLTRADLAEESFLVREEGSGTRSVFEEFMNGVMIRRAKLGIDSGSNETLKQAVMAG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWRELREL 298 GIA L +++ E+ SG+LV+L+ + L I Y R + + P ++ FW L + Sbjct: 238 LGIALLSGHSVAAEVASGRLVLLDVEGLPIRRDWYVVRRADKVLGPASDAFWDYLAQE 295 >UniRef50_C0GP88 Transcriptional regulator, LysR family n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GP88_9DELT Length = 302 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 114/281 (40%), Gaps = 10/281 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + ++FS AA +SQP S I +LEQ + V LF+R + ++ Sbjct: 1 MEFRKLQAFVRVYELQSFSLAARDLFLSQPTISTHIISLEQDLRVSLFDRIGRKVIPTQA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G+I + ++ + + L+ + ++ + + + + + LLP ++S Sbjct: 61 GEILYQAVQDMFRILDEARSNIQELTSQVSGMVIMGGSTIPANYLLPGVLSSFRRIYSDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHG 184 + D + + EG+ D + ++ LF +L V A D ++ Sbjct: 121 CVDLRTADSIKISHDVLEGRLDFGLVGGYAE--HLDLENHLLFTDELMVVAAPDIASKYP 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSEL--SFSTFFVSSMSELLKQVALDGC 242 + + P P + + S + + L +H S + +E + + L G Sbjct: 179 QVITPQQLPDLPWVMREKGSGTRQAMEEALHKHKMDISSLPAKALVQSTEAMVRCVLSGL 238 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR 283 G A+ + + SG+L L +L I + Y + R Sbjct: 239 GAGVTSRLAVDEFLSSGQLARLEVSDLNIRRRFYLIKHRRR 279 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 110/293 (37%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + +F++AA +V+Q S IR+LE+ +G LF+R + L+ Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G + R L ++S + + ++ I L + LP +++ P Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + +++R G+ D F+ + H L L CA D Sbjct: 121 EVRLRQGGSGDLAEQVRAGRLDLAFAVRPARCPDGVLVH-SLDTEPLVLACAGDHPMAER 179 Query: 188 FNLA---QPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + P +++ + +++R L + + L ++ G GI Sbjct: 180 DRVDPRELGEQPFVDFHPDWGTRDVVDRVLAETG-VERRVALEVTDVHSLLELVACGLGI 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 A +P + +G++ + + A + + A R+++E Sbjct: 239 ALVPRSFSAK---NGQVRFVPLASPAPTWETVAITSD-PTSTAAAALLRDVQE 287 >UniRef50_C5CMH8 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=C5CMH8_VARPS Length = 329 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 96/294 (32%), Positives = 157/294 (53%), Gaps = 14/294 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +ETKWL DF++L + R+FS++A R+V+QPAFSRRI+ALE G +L +R P +L+ Sbjct: 1 METKWLEDFISLAETRSFSRSAQLRHVTQPAFSRRIQALEGWAGTDLVDRSSYPTRLTPA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL---F 127 G+ +SQ +LQ L+S A LRG S Q I+IA H+L+ PS ++ + Sbjct: 61 GQTLYSQAIEMLQSLQSTRAMLRGHSAAGQDVIEIAVPHTLAFTFFPSWVTSLREHFGPI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDE----DLLEAPFDHIRLFESQLFPVCASDEH 183 + A++V +AV +L EG D + ++H L ++ + L E + P +D Sbjct: 121 KSRLIALNVHDAVLRLVEGSCDLLIAYHHPSQPLQLDANKYEMVSLGEETVAPWVKADAD 180 Query: 184 GEALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSELLKQVAL 239 G F L P L Y+ +Y+GR++++ L + + + M+E LK +AL Sbjct: 181 GAPRFRLPGRPGQPLPYLGYAPGAYLGRVVDQLLKESGTAIHLDRVYETDMAEGLKVMAL 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELV---IPIQAYAYRMNTRMNPVAER 290 +G GIA+LP+ A+++EI++ KLV E+ ++ AYR + Sbjct: 241 EGHGIAFLPQSAVRKEIKARKLVSALPPEIDSLEATMEIRAYRERPSAPAPVKA 294 >UniRef50_B9YZ26 Transcriptional regulator, LysR family n=2 Tax=Chromobacterium group RepID=B9YZ26_9NEIS Length = 318 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 116/294 (39%), Gaps = 9/294 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ K L F+T + +FS AA VS A S+ I LEQ + V LFNR L L+E Sbjct: 1 MDTLKALMVFMTTAENGSFSDAARKLGVSPAAISQSIARLEQELEVRLFNRTTRQLTLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTW 129 G+ F++Q R + L++ + +L+ D ++I+ +S + ++ + Sbjct: 61 DGRRFYAQCRGPVNNLDAAINQLKASRDEPAGHLRISLPNSFGRHFILPLMGEFCQRHPK 120 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGEA 186 +D+ L E D + ++ L + L+ V A + ++G Sbjct: 121 IRVFFGLDDHFSDLIEDGYDVGVRV--GMMPDSRLSARHLAQLPLYTVAAPEYWSKNGRP 178 Query: 187 LFNLAQPHFPLLNYSRNSYMG--RLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + +NY + + L + + + E + ++A G G+ Sbjct: 179 QKPDDLANHNCINYQFPTSGRLCKWEFERDGERIPLEVNGIYTLNDIEAVCEMARLGFGV 238 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWRELRE 297 A +P + +RSG+L + D + + Y + + P F + E Sbjct: 239 AQVPGHEAMPYLRSGELEAVLTDFISLERSIYICFPHREHIAPRTRVFVDYVAE 292 >UniRef50_Q3J9W4 Transcriptional regulatory protein, LysR family n=6 Tax=Proteobacteria RepID=Q3J9W4_NITOC Length = 307 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 103/289 (35%), Gaps = 8/289 (2%) Query: 12 ETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQG 71 + + F + + +FS+AA S+ A S+ + LE+ +G L NR L L+E G Sbjct: 3 DLNLMAIFARVVEAGSFSEAARRMETSRSAVSKAVAKLEKNLGARLLNRSTRHLSLTESG 62 Query: 72 KIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WA 130 +L++ E + + ++++A+ + + ++ + Sbjct: 63 AALVEYAARILEEAEQAEQVVSSLHAEPRGMLRVSASVAFGTLHIAPALADFVARYPDIK 122 Query: 131 IEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGEAL 187 I+ D VD EG I + DL +L + +HG Sbjct: 123 IDMAITDRPVDLAEEGYDMIIRVTGEPDL---NLVARKLAPVYRKLCATPEYFQQHGIPQ 179 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWL 247 + L+Y+ + G + S + + L Q G GIA L Sbjct: 180 IPEDLVNHDCLDYTLSGEQGYWHFTGPEGEIAVPVSGPLRINDDDALAQAVRGGLGIALL 239 Query: 248 PEYAIQQEIRSGKLVVLNRDELVIPIQAYA-YRMNTRMNPVAERFWREL 295 P + + ++++ G+L + + L + YA Y + F L Sbjct: 240 PTFTVGKDLQEGRLQAVLSEYLPVKRYVYALYLPTRHLAAKIRVFIDFL 288 >UniRef50_C4ZM38 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM38_THASP Length = 301 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 147/296 (49%), Gaps = 11/296 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E KWL DFL+L +FS++A R+VSQPAFSRRIRALE +GV L +R P +L+E Sbjct: 1 MELKWLEDFLSLADSGSFSRSAEQRHVSQPAFSRRIRALEAWLGVALVDRSTFPTRLTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP---LF 127 G+ F L+ +L + A +RG A + A H+L+ P+ + ++ Sbjct: 61 GEAFKGPAADLIHRLHAARALVRGHQTTAGDALVFAVPHTLAFAFFPTWLGRLKAEFGEV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCA---S 180 + A +V + V L EG D + +H L A F+ I+L ++ P + Sbjct: 121 PTRLIAGNVHDVVTMLVEGGCDLLLCYHHPTHPVWLDPARFEGIQLAVERVRPYLPRRLA 180 Query: 181 DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSE-LSFSTFFVSSMSELLKQVAL 239 G L A+ P L Y N+Y+ R+++ L R + + + S M+E LK + L Sbjct: 181 RSAGWQLPGSAEAPIPFLRYGPNTYLRRMVDTILDRAAHPAHLALQYESDMAESLKAMLL 240 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 G G+A+LP A+ +E+ G++VV E + ++ YR P R W+ L Sbjct: 241 AGHGLAFLPASAVAREVERGEVVVAGGPEWSLEMEVRLYRDRANTKPELLRLWQHL 296 >UniRef50_A9IDF8 Transcriptional regulator, LysR-family n=11 Tax=Proteobacteria RepID=A9IDF8_BORPD Length = 304 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 115/300 (38%), Gaps = 9/300 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 +E L F + + +F+QAA +S A S+ I LE +G L R + L+E Sbjct: 1 MEQLTALRVFRNVVQLGSFAQAARQLRLSPAAVSKNIGELEAHLGARLLQRTTRRMSLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 G +++ QI +L L+ L ++++A SL+L L + I + Sbjct: 61 AGSLYYEQISRILDDLDEAGRSLAPLQTGPSGVLRVSAPMSLTLSRLSAAIPAFLQAYPD 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGE 185 +++ D VD ++EG D D L ++ L A HGE Sbjct: 121 LSLDLHLEDRRVDIIQEGY-DLAIRGTD-QLEDSSLVARPLTVLPHVLCGAPAYFQRHGE 178 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 A L ++ + + R + + + + S ++ G G++ Sbjct: 179 PDTPQALRGHNCLRFTLSGHADEWTFRRHGQTVRVPVRGRYQVNSSLAVRDALRAGFGLS 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELR-ELEIVLS 303 +P ++ ++ G+L + D ++ YA + R F +R EL+ ++ Sbjct: 239 LVPRTYVEDDLAQGRLRAVLNDWAMVDTYLYAVYPSRRHVAAKVRAFADFVRAELQGPVT 298 >UniRef50_Q15ZP2 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q15ZP2_PSEA6 Length = 294 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 108/292 (36%), Gaps = 10/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR--QVTPLQLS 68 + L F ++ +FSQAA + +SQPA S+ ++ LE +G++L R + L L+ Sbjct: 1 MNLHALRVFHSVAHLGSFSQAAEALYISQPAVSKALKELEHQLGMQLIERAAKGKKLALT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 + G+ + R + ++ L ++R + Q + I A+ +++ L +++ P Sbjct: 61 QGGQSLFNHARSIFAIEQAALEDVRARTGLKQGTLVIGASTTIAGYWLAPYLARFNQQYP 120 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 ++ + + L D + + + + V +S Sbjct: 121 KIKVEVQVANTAQIEQALLACTIDFALV--EGSASDPHISSQHWQDDPMSIVYSSSLKPA 178 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 L S ++ L ++ + +E + + G G+A Sbjct: 179 DDKEKWLSEQRWLLREPGSGTRQMSFSLLAEQG-IAVNDSMQLGSNEAIARGVTQGMGVA 237 Query: 246 WLPEYAIQQEIRSGKLVVLNRD-ELVIPIQAY-AYRMNTRMNPVAERFWREL 295 LP+ + + KL V++ ++ Y + +P A F + L Sbjct: 238 LLPQVVTEDLLALKKLKVISTQKSKLLSRPLYQLEYRDRPSSPAANAFAQIL 289 >UniRef50_A8HAD2 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A8HAD2_SHEPA Length = 304 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 105/295 (35%), Gaps = 11/295 (3%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + F+ + FS AA +S+ A S+RI LEQ +G LF R L L+E Sbjct: 1 MDTFNAIPIFVAVADSAGFSSAARVLGISKSAVSKRITQLEQQLGARLFYRSTRNLSLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT- 128 G+ ++ + + + + +KI ++ L S+I + + Sbjct: 61 AGERYYQYASQANRAAKQAEDAVSELQGEPKGLLKIQVPMTIGQMHLASLIPEFIERYPE 120 Query: 129 WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALF 188 I+ + D+ ++ + +G D D L+++ L + + + Sbjct: 121 IQIDLVMDDDEINLIEQG-FDLAIRADD--LVDSNLIARLLVPLHSVVCVSPSFYQKHRQ 177 Query: 189 NL----AQPHFPLLNYSRNSYMGRL-INRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 L + YS + N ++ + + + S L+ + G G Sbjct: 178 QLTSPSQLADLNCILYSYSKNADVWQFNANNGDEFKVKVTGNYRVNNSAALRDAVIAGMG 237 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELRE 297 A LP + I+ G LV + +D + + A P F + E Sbjct: 238 AARLPTFVAGAAIQRGDLVAIFKDYTMPSKKLNAIYPERHYLPAKVRVFLDYVIE 292 >UniRef50_UPI0001B4C1F4 LysR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C1F4 Length = 297 Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 107/295 (36%), Gaps = 12/295 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E K L FL + + +F++AA + Q + + I+ALEQ +G LF R + L+ Sbjct: 1 MELKHLTTFLAVARHMSFTRAAQDLDYVQSSVTAHIKALEQDLGAALFERLGRRITLTHA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYA---QRKIKIAAAHSLSLGLLPSIISQMP--- 124 G+ R L Q E + G S + ++IAA SL LLP ++ + Sbjct: 61 GRELLPHARQLAHQAEQARQAVEGASGDPRTIRGTLRIAAPESLCAHLLPPVLRALMDHF 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHG 184 P + + L EG D F +E + L + L + Sbjct: 121 PHLRVVFGPAGRNTLLTSLNEGTLDAGF-LLEEKITAPMATTELLAQEPLRLIAHPGHPL 179 Query: 185 EALFNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 ++ LL +++R L R + T E LK+ A G Sbjct: 180 LHRRHVDTADLADETLLLIEPGCAQRDVMDRELGRAAIHP--TTMEFVSVEALKRCAAAG 237 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 G+A LP A+ E+ G++ L + Y + + V R Sbjct: 238 LGVALLPAAAVTDELARGEVAPLPWTSKPVLGIHYLRHKDRLPSTVITTLADLAR 292 >UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A6VV39_MARMS Length = 295 Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 119/293 (40%), Gaps = 12/293 (4%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ K L F+ + K +F++AA V+QPA S I+ LE +G+ L +R + L+++ Sbjct: 1 MDIKPLRYFIAIAKTESFTKAAQQLGVAQPAVSMAIKKLEADLGLTLIHRADRNIGLTDE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 GK ++Q + L E+ +Q ++++ L P I+ P Sbjct: 61 GKKLLIHAEKIIQATDDALLEMSELKGLSQGEVRVGIPSMLGSYYFPPILMAFRHKYPTI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---G 184 T + + L G+ D + L + L ++ A+D Sbjct: 121 TLKVIEGGTWQLQKMLENGELDLSVIV--AETLPDGLETQALIREEMLVTIATDHPFSQL 178 Query: 185 EALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 E + A L+ + + R++++ L + + + F +++ L+K + G GI Sbjct: 179 EKISPEAFFDEELVMFKEGYFHRRIVDK-LAKACKKTPKIGFETNLIPLIKSITQQGFGI 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRE 297 + L I+++ L+ + D + A+R ++ ++ F + E Sbjct: 238 STLLAMVIEEDDD---LITRSFDPPIWLDLGIAWRKDSYLSKANRAFLEFVNE 287 >UniRef50_Q2T3T5 Transcriptional regulator, LysR family n=56 Tax=Proteobacteria RepID=Q2T3T5_BURTA Length = 399 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 107/292 (36%), Gaps = 9/292 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+T + +F+ AA +S+ SRR+ ALE ++GV L R L +++ Sbjct: 101 MQFDDLRIFVTTVEAGSFTGAADKLLLSKQFVSRRVMALEASLGVRLLVRNTRKLAVTDL 160 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-W 129 G F+ + +L + + + +KI+A S + L +I++ Sbjct: 161 GHEFYRRATRILADVAETEEAMSARHGDLRGTLKISAPMSFGIAYLSPLIAEFLVRHPAV 220 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASD---EHGEA 186 + D VD + EG D L ++ RL E ++ C+ +H Sbjct: 221 RLHVDLSDRHVDLIGEG-FDLALRI--GALPDSTLIARRLGELRMVACCSPAYRRKHRAP 277 Query: 187 LFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 L Y + G +++ ++++ A+ G GIA Sbjct: 278 ATPADLHGHACLLYGQEGRTG-WEFTIGGARRTFEVQGALLANNGDVIRDAAIAGLGIAL 336 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWRELRE 297 LP + + + +G LV + P+ A R F + E Sbjct: 337 LPHFIVAAALDAGLLVTVLEPFAQSPLPVSAVYPQHRQDMATCRAFLGFIEE 388 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 113/297 (38%), Gaps = 9/297 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 ++ L F+ + + R+F++AA + +V+QP+ S++IRALE +G +LF R + L++ Sbjct: 1 MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G+ R +L ++ E++ ++ + +++ A SL GLLP ++ P Sbjct: 61 GEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGI 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH---- 183 ++ + V L G D L L V A + Sbjct: 121 QLLVQESGSHDLVRDLARGALDLALVVLPLPSPSPALTTEELLREDLVVVSAPNLPPPGD 180 Query: 184 GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCG 243 G + H L+ + + L R + + A G G Sbjct: 181 GRQVRIADLEHEQLIMFRHGYDLRDLTVAA-CRAQGFEPVFAIEGGEMDAVLGFARAGLG 239 Query: 244 IAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI 300 +A +P Q S ++ + L I A+R + + A+ F R L E Sbjct: 240 VAIVPSMVAQNVDPSLRVTPIAPPALHRTIAL-AHRTDVALPRAAQEFRRTLLERTT 295 >UniRef50_Q4ZRN4 Regulatory protein, LysR:LysR, substrate-binding n=15 Tax=Proteobacteria RepID=Q4ZRN4_PSEU2 Length = 325 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 99/295 (33%), Gaps = 8/295 (2%) Query: 7 ILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQ 66 ++ + L+ F + +FS AA +++QPA S +R LE + ++L R L+ Sbjct: 29 VMRRLNLNHLHTFSLVIAHGSFSAAAERLHLTQPAVSLHVRQLEDQLKLQLIERVGKRLK 88 Query: 67 LSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPL 126 + G + I + +E L L + KI I + + LLP ++ + Sbjct: 89 PTSAGTVLLEHIARIDAVVEDALQALSSHASGVAGKIAIGTGATACIHLLPPMLQALRRR 148 Query: 127 FT---WAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH 183 F + + + + + E D L E + AS + Sbjct: 149 FPELDVRVSTGNTEGILKAVEENLLDLALVTLPA--ASRSLHITPLLEDAFVAIFASSQR 206 Query: 184 GEALF--NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 PL+ + S LI+ H+ + E +K++ Sbjct: 207 PMPAHMTPERLSAQPLVVFEAGSSTRLLIDEWFL-HAGIRVKPVMELGSIEAIKEMVAAD 265 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELR 296 G + +P A+ L +L + A R + ++ + L+ Sbjct: 266 LGYSIVPRMAVAALHHRRGLQMLPLATALSRTLGIALRQDKPVSKALRQVLDALQ 320 >UniRef50_B2T1K1 Transcriptional regulator, LysR family n=63 Tax=Burkholderia RepID=B2T1K1_BURPP Length = 367 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 116/293 (39%), Gaps = 8/293 (2%) Query: 11 IE-TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSE 69 ++ + + F+ + +F++AA + ++S +R + LE +G L NR L L+E Sbjct: 1 MDHLQSMRVFVKVADLGSFARAASAMDISNAVATRHVADLEGRLGTRLLNRTTRSLSLTE 60 Query: 70 QGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTW 129 G+++ + R +L +LE + + ++I A L L ++ + Sbjct: 61 SGQVYLERARQILDELEDVEQMVVARNHEPVGTLRIVAPVVFGLHNLAPVLQTYAERYPK 120 Query: 130 AI-EAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGE 185 I + VD VD + EG D + A RL + ++HG Sbjct: 121 VIPDVTLVDRQVDLVEEG-FDVGVVIA-RQMRSASIVTRRLTTGCMTVCATPAYLEKHGM 178 Query: 186 ALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIA 245 P L+ + + + S V++ +E+L+Q AL G GIA Sbjct: 179 PTRPEHLLEHPCLSLPSEYWGDERVFTGPEGEVRVRPSNVIVANNTEMLRQFALLGMGIA 238 Query: 246 WLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPV-AERFWRELRE 297 LP Y I +++ G+LV L D + ++ + R P F L E Sbjct: 239 ILPSYLIGRDMTRGRLVRLLGDYRLPQVEINIAYPSRRHLPAKVRTFIDHLVE 291 >UniRef50_C6NW00 Transcriptional regulator, LysR family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NW00_9GAMM Length = 332 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 119/299 (39%), Gaps = 11/299 (3%) Query: 4 CGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVT 63 +L I + L FL + R+F++AA + ++QP S +++ L + +G+ LF + Sbjct: 14 LSTLLRQITFRQLQVFLAVSHHRSFTKAADALFLAQPTVSLQMKKLGEIVGLPLFEQIGK 73 Query: 64 PLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM 123 ++L++ G+ ++ R + +E+ ++ + ++++ + + + P +++ Sbjct: 74 EIRLTDAGQDLYTACREIFAIVENLETQIADRKGIRRGRLRLGVVTT-AKYIAPELLAAF 132 Query: 124 ---PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS 180 P +++ + DE + ++++ + D E + + L + Sbjct: 133 GQQFPGIQFSMTVSNRDEIIRRIQDSEDDLYVMGQVPT-DEVAVEATPFAWNPLTVMVPR 191 Query: 181 DEH----GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQ 236 G + A P L S R +L + S +E +K Sbjct: 192 GHPLTRLGRPVPLAAIAEAPFLIREPGSGTRHAYLRLFAE-KDLRPNITMELSSNEAIKH 250 Query: 237 VALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTR-MNPVAERFWRE 294 G GI+ L +++ E G + VL+ + I + Y R ++ A++F Sbjct: 251 AIASGLGISILSIHSLALEGTEGPVEVLDAEGFPILRKWYLVYPRDRVLSLTAQKFMEF 309 >UniRef50_B9MIR3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=B9MIR3_DIAST Length = 299 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 116/297 (39%), Gaps = 13/297 (4%) Query: 9 HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLS 68 NI + L FL L + + S AA +V+QP S ++R + QA+GV L+ + L+ Sbjct: 1 MNITFRQLRLFLALAETGSVSAAAKLMHVTQPTASMQLREVAQAVGVPLYEVVSRRVYLT 60 Query: 69 EQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PP 125 E G+ R + + ++ + G ++K+A + + +P ++ P Sbjct: 61 EAGQALARTARAIASEWDAFEQGISGAKGLTSGRLKVAVVST-AKYFVPRLLGSFCKLHP 119 Query: 126 LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE 185 ++E ++ D + +LR Q D + P + L + L + + Sbjct: 120 QIDISLEVLNRDHVITRLRANQDDLYVMSMPPG--DLPLEDHVLMPNPLVVIAPAGHRLA 177 Query: 186 ALFNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGC 242 A +A P + + S + L R + + +E +K+ Sbjct: 178 AKKRVALPQLQSERFILREKGSGTRMATDAHL-RQLGFAPAAVLELGSNEAIKESVQGQL 236 Query: 243 GIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRM-NTRMNPVAERFWRELREL 298 G++ + +A+ + L +LN I Q + R++P+AE F L + Sbjct: 237 GVSIVSRHALGPHLDG--LAILNVQGFPIQSQWHLVWPKGKRLSPIAEVFRGHLMDE 291 >UniRef50_UPI0001788193 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788193 Length = 295 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 105/295 (35%), Gaps = 8/295 (2%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 + I +W F + + S+AA +++QPA S ++ LE+ IG LF R ++L Sbjct: 1 MMEINMEWYRVFYWTARLGSLSRAADHLHITQPAVSHTVKHLEETIGGPLFFRTTKGVKL 60 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP--- 124 + +G + I +E + + +I I A+ +L L + Sbjct: 61 TSEGDVLFRYIEQAFGLIEIGEKAIADMHNLHSGEINIGASDTLCKYYLLPHLEYFHAAY 120 Query: 125 PLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEH- 183 P I E + L+EG+ D + F L + E Sbjct: 121 PDIRIRITNRTTPETLSLLKEGKIDFGIVHLPASDKQIDFRPSSPIHDCLVAGRSYAERA 180 Query: 184 --GEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDG 241 L ++PLL +++ + F ELL Q A G Sbjct: 181 GLPNPLSLHDIGNYPLLMLETGGSTRMYVDQY-AELQGVKLKPEFELGSIELLVQFARSG 239 Query: 242 CGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWREL 295 G+A++ + E+++G+L+ + D + A ++ A+ F L Sbjct: 240 FGLAFVIRDYAKDEMQTGQLIEVPLDPPIPERSIGIATLRGIPLSAAAKSFLALL 294 >UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3I8L6_9BACI Length = 292 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 111/291 (38%), Gaps = 9/291 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L+ F+ + + +F++AA +SQP S++IR LE +G+ LF+R + ++E Sbjct: 1 MEIRHLHYFMAVCEELHFTKAAEKLGISQPTLSQQIRVLEDELGMPLFDRIGKKIVVTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-W 129 G + + +L L++ ++ + +I++ S + ++ F Sbjct: 61 GALLFTYATAMLNTLQNVKGAIKDLQEVQGGQIRVGIMPSDLDYRITQLVIDFHQKFPRV 120 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFN 189 + + + + ++ E + D + E I L + + + + Sbjct: 121 KLTILASIDIMRQVLENEVDIGIGTNVE--PHDRLVIIPLRKEEYVVTVSKEHPWAHREA 178 Query: 190 L---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAW 246 + PL+ Y ++ T+ +H T +S + + G Sbjct: 179 VTIAELKDLPLVMYPEGFLGREIVEETVKKHG-FQLHTILETSSVTSIMNLVRANIGATV 237 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 P IQQ + L ++ + + YR++ ++ F +++ Sbjct: 238 QPYPLIQQ-MNDSDLRIIRLTDTIPSRSLSIIYRVDRYVSHATTAFIEQIK 287 >UniRef50_Q4ZL95 Regulatory protein, LysR:LysR, substrate-binding n=21 Tax=Gammaproteobacteria RepID=Q4ZL95_PSEU2 Length = 315 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 170/296 (57%), Gaps = 9/296 (3%) Query: 8 LHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQL 67 L N+E+KWL DF L R+FSQAA R V+QPAFSRRIR+LE A+G+ L NR TP++L Sbjct: 16 LMNLESKWLEDFSALAATRSFSQAAERRFVTQPAFSRRIRSLESALGLTLVNRSRTPIEL 75 Query: 68 SEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPP-- 125 + G++F R +++QL + L +++AAAHSL+LG P I+Q+ Sbjct: 76 TAAGQLFLVTARTVVEQLGEVVRHLHHLEGGQGEVMQVAAAHSLALGFFPRWIAQLRNEG 135 Query: 126 -LFTWAIEAIDVDEAVDKLREGQSDCIFSFHDED----LLEAPFDHIRLFESQLFPVCAS 180 + A +V +AV LREG D + +F+D D + F + L +++ PVCA+ Sbjct: 136 LNIATRLVATNVGDAVHALREGGCDLMLAFYDPDAALQMDAEIFPSLHLGHTEMLPVCAA 195 Query: 181 DEHGEALFNLAQP-HFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL 239 D G LF++ PLL YS +++GR +N L R L F+T + ++M++ LK +AL Sbjct: 196 DAEGRPLFDMEGEGSVPLLAYSTGAFLGRSVN-LLLRQRNLRFTTVYETAMADSLKSMAL 254 Query: 240 DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 +G GIAW+P+ +++ E+ G+LVV + +P++ YR WR+L Sbjct: 255 EGLGIAWVPQLSVRAELARGELVVCGGPQWHVPLEIRLYRCALVRKANVRLLWRKL 310 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 119/300 (39%), Gaps = 10/300 (3%) Query: 2 DDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQ 61 D+C + NI+ + L F+ + ++F AA S ++SQPA +RRI+ LE +GV L R Sbjct: 8 DNCVGRM-NIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERT 66 Query: 62 VTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIIS 121 + L+ G+ F + R +L LE++L +R ++ + IA + + LP +IS Sbjct: 67 TRRVSLTAVGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVIS 126 Query: 122 QM---PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVC 178 P + I +E + + ++D + D + FD L E C Sbjct: 127 AFTEEFPAIRFRIFDAGANEVLQSILNREADFGITLLGADDPDVTFD--PLIEEPFLLAC 184 Query: 179 ASDEHGEAL---FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLK 235 D + R S +++ L R + + +FF Sbjct: 185 RRDHPLARQESVTWADLAAHRFVTVGRTSGNRLIMDLALARAN-VRPRSFFEVQHLSTSL 243 Query: 236 QVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWREL 295 + G G+A LP A+ + + + V R P AE+F++ L Sbjct: 244 GLVEAGLGVAALPRMALPAGPHPSIVTLPLIEPRVTRTVGVVRVPGARRAPAAEQFYQML 303 >UniRef50_B4CZS1 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS1_9BACT Length = 305 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 107/293 (36%), Gaps = 10/293 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 + F L + +FS+AAV ++Q A S++IRALE V L R L+ + Sbjct: 1 MYIDTFKVFCDLAETGSFSKAAVLNAITQSAVSQQIRALENKFQVTLVERGRRNFALTAE 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMP---PLF 127 G F R +L+ + L D +++IAA +S+ L LPS + P Sbjct: 61 GNAFLEASREILEVYNNLDHRLHELRDVIAGELRIAAIYSIGLHELPSHLKAFREKFPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 +E + ++ G D E +L +C + Sbjct: 121 ELHVEYRRSQQVYTQVLGGDVDIGLVAFP--TKRNGLQIEIFSEDKLVLICHPNHPLAGR 178 Query: 188 FNLAQPHFP---LLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 + + + + ++I+R H ++ E +K+ G+ Sbjct: 179 KKIKIEELNGEKFIAFEPDLPTRKVIDRHFRDH-QIEIEHAMEFDNIETVKRAVEIESGV 237 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVAERFWRELR 296 + +P ++QE+ SG L L+ + + + N +P + F L+ Sbjct: 238 SIVPRNTVRQEVESGVLSALDIEGPKMSRPLGILTKRNRARSPAHKEFVAALK 290 >UniRef50_C8WRL7 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL7_ALIAD Length = 303 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 118/294 (40%), Gaps = 9/294 (3%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 + L +T+ + S+AA + +V+QP +R+I+ LE+ G LF+R L L+ G+ Sbjct: 2 FEALRALVTVVSLGSVSEAARALHVTQPTVTRQIQQLERHFGQALFDRSGKRLALTPAGE 61 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLFTW 129 H+ +L++ E L S+ +++ A S +L LP+++++ P + Sbjct: 62 RVHAYALEVLRKQEELAESLLEMSNPEAGLVRMGAGLSPTLYRLPAMVARYASMHPRVRF 121 Query: 130 AIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGE--AL 187 + +++L D + EA + + L+ +L V S Sbjct: 122 QVVTGSSKVTLERLASRVVDLAIVTTPPE-DEAGVEQVALWRDELVAVAPSYHALAGKRA 180 Query: 188 FNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSF-STFFVSSMSELLKQVALDGCGIAW 246 + +PL+ S + R I+ L R + E + + G G+A Sbjct: 181 TIVELAQYPLVVMHGESGLRRQIDDLLHRAGVERPAPPVMETDSLEAMNRFVQAGLGLAV 240 Query: 247 LPEYAIQQEIRSGKLVVLNRDELVI--PIQAYAYRMNTRMNPVAERFWRELREL 298 +P A+ ++ G+L +++ + +R + + A F L + Sbjct: 241 VPWPAVADDVTQGRLKLVHIVGCDLGQRTVTLVWRKESHIPAAARAFIEWLASV 294 >UniRef50_Q885P4 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas syringae group RepID=Q885P4_PSESM Length = 301 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 9/290 (3%) Query: 13 TKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGK 72 + + F + + +F+ A+ +S+ SRR+ LE+ +GV L NR L ++ G+ Sbjct: 4 FEDMRIFCQVMESGSFTAASDKLGLSKQFVSRRLMQLEERLGVRLLNRSTRRLDVTPLGQ 63 Query: 73 IFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFT-WAI 131 ++ LL ++E + G + + ++++A S ++ L ++ + A+ Sbjct: 64 SYYESALRLLAEVEQVEQGITGQNSEPRGTLRLSAPLSFAVAHLGCLLPVFLQRYRDVAV 123 Query: 132 EAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS---DEHGEALF 188 E D VD + EG D + L ++ R+ + E G Sbjct: 124 EVDLSDRPVDVISEGY-DLVLRI--GVLEDSSLIARRIASIDRVYCASPTYLAERGTPQQ 180 Query: 189 NLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLP 248 L Y S + + + L+ S ++ ELLK AL G GI +LP Sbjct: 181 PEDLHSHECLPYGH-SRHVQWRFQGTGKPVSLNVSGRMRANNGELLKDAALAGLGITYLP 239 Query: 249 EYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRM-NPVAERFWRELRE 297 + + +R+G LV + + P+ A R + + F LRE Sbjct: 240 TFIVGDALRAGSLVRVLDELRPEPLTLSAVYPQHRQASRPVQAFIEFLRE 289 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 104/285 (36%), Gaps = 10/285 (3%) Query: 11 IETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQ 70 +E + L F+ + + +F++AA +V+QP S ++R LE +G +L +R ++ +E Sbjct: 1 MELRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEA 60 Query: 71 GKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQM---PPLF 127 G R L + + + + + ++ I S +LP +++ P Sbjct: 61 GVAVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDV 120 Query: 128 TWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEAL 187 + + D V L+ G+ D L + L + Sbjct: 121 EITLGEDNSDRLVQALQHGELDLALIGSARTGPPPGLATQTLTDEPLVAAVSHTHPLATR 180 Query: 188 FNL---AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGI 244 L A PL+ R + + ++ + F +S L +A G G+ Sbjct: 181 STLTVAALAGSPLMCLPRGTGIRTALDDACATAG-VEPRIAFEASDPVPLALLAARGLGV 239 Query: 245 AWLPEYAIQQEIRSGKLVVLNRDELVIPIQA-YAYRMNTRMNPVA 288 A LP RSG+L + + A+R ++P A Sbjct: 240 AILPASLAAA--RSGELHAIALTRPQPRGRIELAWRAEGPVSPAA 282 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.193 0.568 Lambda K H 0.267 0.0589 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,375,374,859 Number of Sequences: 3077464 Number of extensions: 146317831 Number of successful extensions: 449238 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 18689 Number of HSP's successfully gapped in prelim test: 2092 Number of HSP's that attempted gapping in prelim test: 396930 Number of HSP's gapped (non-prelim): 22141 length of query: 303 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 175 effective length of database: 646,480,964 effective search space: 113134168700 effective search space used: 113134168700 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 94 (40.3 bits)