BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (712 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9L646 Anaerobic ribonucleoside-triphosphate reductase ... 1446 0.0 UniRef50_P43752 Anaerobic ribonucleoside-triphosphate reductase ... 1170 0.0 UniRef50_Q032I4 Ribonucleoside-triphosphate reductase / ribonucl... 759 0.0 UniRef50_D1BHZ8 Ribonucleoside-triphosphate reductase class III ... 749 0.0 UniRef50_D2RBY9 Anaerobic ribonucleoside-triphosphate reductase ... 662 0.0 UniRef50_B8DWG9 Anaerobic ribonucleoside-triphosphate reductase ... 645 0.0 UniRef50_D1BVJ9 Anaerobic ribonucleoside-triphosphate reductase ... 632 e-179 UniRef50_Q6QGI8 Putative anaerobic ribonucleoside-triphosphate r... 591 e-167 UniRef50_UPI0001BC56DE anaerobic ribonucleoside triphosphate red... 581 e-164 UniRef50_C3WCA1 Anaerobic ribonucleoside-triphosphate reductase ... 577 e-163 UniRef50_B3RGP7 Anaerobic ribonucleoside-triphosphate reductase ... 569 e-160 UniRef50_Q7P4N7 Anaerobic ribonucleoside-triphosphate reductase ... 561 e-158 UniRef50_B1BE54 Anaerobic ribonucleoside-triphosphate reductase ... 547 e-154 UniRef50_C8NQX8 Anaerobic ribonucleoside-triphosphate reductase ... 538 e-151 UniRef50_A9KQ95 Anaerobic ribonucleoside-triphosphate reductase ... 493 e-137 UniRef50_C2BIL8 Possible ribonucleoside-triphosphate reductase n... 477 e-133 UniRef50_C4ZF10 Anaerobic ribonucleoside-triphosphate reductase ... 444 e-123 UniRef50_D0WIV3 Anaerobic ribonucleoside-triphosphate reductase ... 420 e-116 UniRef50_C7MM33 Anaerobic ribonucleoside-triphosphate reductase ... 414 e-114 UniRef50_C6JR80 Ribonucleoside-triphosphate reductase n=2 Tax=Fu... 385 e-105 UniRef50_A4J2C9 Ribonucleoside-triphosphate reductase class III ... 375 e-102 UniRef50_B2A3V1 Anaerobic ribonucleoside-triphosphate reductase ... 357 1e-96 UniRef50_A5HXZ1 Anaerobic ribonucleoside-triphosphate reductase ... 327 1e-87 UniRef50_C6IYT0 Anaerobic ribonucleoside-triphosphate reductase ... 319 3e-85 UniRef50_A6L0X1 Anaerobic ribonucleoside-triphosphate reductase ... 318 3e-85 UniRef50_Q733N6 Anaerobic ribonucleoside-triphosphate reductase,... 309 3e-82 UniRef50_C5H7Q4 Anaerobic nucleoside diphosphate reductase n=3 T... 295 6e-78 UniRef50_C3RPW0 Anaerobic ribonucleoside-triphosphate reductase ... 291 8e-77 UniRef50_B1YME3 Anaerobic ribonucleoside-triphosphate reductase ... 289 2e-76 UniRef50_A6LHE5 Anaerobic ribonucleoside-triphosphate reductase ... 288 4e-76 UniRef50_B2RKM0 Anaerobic ribonucleoside-triphosphate reductase ... 287 8e-76 UniRef50_C8P1M7 Anaerobic ribonucleoside-triphosphate reductase ... 286 3e-75 UniRef50_B8G1P5 Anaerobic ribonucleoside-triphosphate reductase ... 262 3e-68 UniRef50_C7NCJ9 Anaerobic ribonucleoside-triphosphate reductase ... 244 6e-63 UniRef50_C8W489 Anaerobic ribonucleoside-triphosphate reductase ... 232 4e-59 UniRef50_C9RJ61 Anaerobic ribonucleoside-triphosphate reductase ... 192 4e-47 UniRef50_A5UN10 Anaerobic ribonucleoside-triphosphate reductase,... 172 4e-41 UniRef50_UPI0001C41C69 anaerobic ribonucleoside-triphosphate red... 161 1e-37 UniRef50_A4FZY4 Anaerobic ribonucleoside-triphosphate reductase ... 157 1e-36 UniRef50_UPI0001B41CA5 anaerobic ribonucleoside triphosphate red... 156 3e-36 UniRef50_D1Z2H8 Anaerobic ribonucleoside-triphosphate reductase ... 155 5e-36 UniRef50_Q0W698 Anaerobic ribonucleoside-triphosphate reductase ... 154 1e-35 UniRef50_B8DLP5 Anaerobic ribonucleoside-triphosphate reductase ... 141 8e-32 UniRef50_Q12U66 Anaerobic ribonucleoside-triphosphate reductase ... 134 1e-29 UniRef50_A6TN19 Anaerobic ribonucleoside-triphosphate reductase ... 134 2e-29 UniRef50_B3QGB6 Anaerobic ribonucleoside-triphosphate reductase ... 130 2e-28 UniRef50_C6BJE1 Anaerobic ribonucleoside-triphosphate reductase ... 129 5e-28 UniRef50_A9KI88 Anaerobic ribonucleoside-triphosphate reductase ... 120 2e-25 UniRef50_C7N7G2 Anaerobic ribonucleoside-triphosphate reductase ... 119 4e-25 UniRef50_D1SNH7 Anaerobic ribonucleoside-triphosphate reductase ... 117 1e-24 UniRef50_Q8TWY0 Oxygen-sensitive ribonucleoside-triphosphate red... 117 2e-24 UniRef50_B3E035 Ribonucleotide reductase of class III (Anaerobic... 115 4e-24 UniRef50_B3EQU4 Anaerobic ribonucleoside-triphosphate reductase ... 112 4e-23 UniRef50_D1B9B6 Anaerobic ribonucleoside-triphosphate reductase ... 108 9e-22 UniRef50_B7C7M8 Putative uncharacterized protein n=1 Tax=Eubacte... 103 3e-20 UniRef50_Q0TSL9 Anaerobic ribonucleoside-triphosphate reductase ... 99 6e-19 UniRef50_A8F4B5 Anaerobic ribonucleoside-triphosphate reductase ... 96 4e-18 UniRef50_A5M517 Anaerobic ribonucleoside-triphosphate reductase ... 91 2e-16 UniRef50_Q2LUI4 Anaerobic ribonucleoside-triphosphate reductase ... 87 3e-15 UniRef50_B5YJD4 Anaerobic ribonucleoside-triphosphate reductase ... 86 4e-15 UniRef50_Q58242 Mja rnr-2 intein n=3 Tax=Methanococcales RepID=Y... 78 1e-12 UniRef50_A2BJ51 Ribonucleotide reductase, oxygen sensitive (RNR,... 76 5e-12 UniRef50_C7ZMN2 Predicted protein n=1 Tax=Nectria haematococca m... 76 5e-12 UniRef50_C5A351 Anaerobic ribonucleoside triphosphate reductase ... 75 1e-11 UniRef50_Q1PZG5 Similar to oxygen sensitive ribonucleoside triph... 73 5e-11 UniRef50_B8D5R3 Anaerobic ribonucleoside triphosphate reductase ... 72 5e-11 UniRef50_A7I0I1 Anaerobic ribonucleoside-triphosphate reductase ... 67 2e-09 UniRef50_C2WAD7 Anaerobic ribonucleoside-triphosphate reductase ... 67 3e-09 UniRef50_A8A8G8 Anaerobic ribonucleoside-triphosphate reductase ... 63 3e-08 UniRef50_D2MLR7 ATP cone domain protein n=1 Tax=Bulleidia extruc... 63 4e-08 UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=My... 60 4e-07 UniRef50_B1L9A6 Anaerobic ribonucleoside-triphosphate reductase ... 59 6e-07 UniRef50_A1RX14 Anaerobic ribonucleoside-triphosphate reductase ... 57 2e-06 UniRef50_Q12U78 Anaerobic ribonucleoside-triphosphate reductase ... 57 3e-06 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 54 2e-05 UniRef50_C5VLT4 Anaerobic ribonucleoside-triphosphate reductase ... 52 1e-04 UniRef50_D1JM33 Anaerobic ribonucleoside-triphosphate reductase ... 51 1e-04 UniRef50_B3TA58 Putative ATP cone domain protein n=6 Tax=environ... 51 2e-04 UniRef50_A6L4X5 Oxygen-sensitive ribonucleoside-triphosphate red... 50 3e-04 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 49 5e-04 UniRef50_A4VUA6 Oxygen-sensitive ribonucleoside-triphosphate red... 49 6e-04 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 49 6e-04 UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=The... 49 8e-04 UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 47 0.002 UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 47 0.002 UniRef50_C9LGY8 Anaerobic ribonucleoside-triphosphate reductase ... 47 0.003 UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Met... 47 0.004 UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylc... 46 0.005 UniRef50_B2V5I1 Anaerobic ribonucleoside-triphosphate reductase ... 45 0.012 UniRef50_Q2FSI0 Oxygen-sensitive ribonucleoside-triphosphate red... 45 0.012 UniRef50_B9PEY4 Predicted protein (Fragment) n=1 Tax=Populus tri... 45 0.014 UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=... 44 0.016 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 44 0.017 UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=ce... 44 0.027 UniRef50_C5VU72 Anaerobic ribonucleoside-triphosphate reductase ... 44 0.030 UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Acidu... 42 0.094 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 42 0.095 >UniRef50_Q9L646 Anaerobic ribonucleoside-triphosphate reductase n=233 Tax=root RepID=NRDD_SALTY Length = 712 Score = 1446 bits (3743), Expect = 0.0, Method: Compositional matrix adjust. Identities = 688/712 (96%), Positives = 697/712 (97%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 MTPHVMKRDGCKVPFKSERIKEAILRAAKAA VDDADYCATVA VVS QM R+QVDINE Sbjct: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAGVDDADYCATVAEVVSSQMNARSQVDINE 60 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQTAVENQLMSGPYKQLARAYIEYRHDRDI+REKRGRLNQEIRGLVEQTN++LLNENANK Sbjct: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIQREKRGRLNQEIRGLVEQTNSALLNENANK 120 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL Sbjct: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 Query: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY 240 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT SY Sbjct: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTESY 240 Query: 241 NKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 NKHRKTA+EW IPDAEGYA SRT KECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS Sbjct: 241 NKHRKTADEWQIPDAEGYARSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 Query: 301 WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR 360 WESRLIQ SILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK GDPNYDIKQLALECASKR Sbjct: 301 WESRLIQASILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDPNYDIKQLALECASKR 360 Query: 361 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA 420 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA Sbjct: 361 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA 420 Query: 421 KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIF 480 KGDE FWKLLDERL LARKALMTRIARLEGVKARVAPILYMEGACGVRL ADDDVSEIF Sbjct: 421 KGDETAFWKLLDERLALARKALMTRIARLEGVKARVAPILYMEGACGVRLKADDDVSEIF 480 Query: 481 KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFS 540 KNGRASISLGYIGIHETINALFGGEH+YD+EQLRAKGIAIVERLRQAVDQWK+ETGYGFS Sbjct: 481 KNGRASISLGYIGIHETINALFGGEHLYDSEQLRAKGIAIVERLRQAVDQWKDETGYGFS 540 Query: 541 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL 600 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL Sbjct: 541 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL 600 Query: 601 ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF 660 ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF Sbjct: 601 ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF 660 Query: 661 TCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 TCPKCGNHDA+RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG Sbjct: 661 TCPKCGNHDAARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 >UniRef50_P43752 Anaerobic ribonucleoside-triphosphate reductase n=182 Tax=root RepID=NRDD_HAEIN Length = 707 Score = 1170 bits (3027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 546/704 (77%), Positives = 621/704 (88%), Gaps = 4/704 (0%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQ--VDINEIQ 62 V+KRDG + F+ +RI AI +AA A + D YC + V ++ R+Q +DIN+IQ Sbjct: 6 VIKRDGSRAEFEIQRIINAIKKAASAVNISDEFYCHQIGQEVGNEIFTRHQGEIDINQIQ 65 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 VE++LM+ Y ++ARAYIEYRHDRD+ REKR +L +EI GL+EQ+N LLNENANKD+ Sbjct: 66 KIVEDKLMASRYPEVARAYIEYRHDRDLAREKRSQLTKEIEGLIEQSNVELLNENANKDA 125 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182 KVIPTQRDLLAGIVAKHYA+ ++LPRDVV+AHE+G+IHYHDLDY+PFFPMFNCML+DL+G Sbjct: 126 KVIPTQRDLLAGIVAKHYAKHNILPRDVVEAHEKGEIHYHDLDYAPFFPMFNCMLVDLEG 185 Query: 183 MLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242 ML++GFKMGNAEIEPPKSI TATAVTAQIIAQVASHIYGGTTINRIDEVL+P+V SY K Sbjct: 186 MLSRGFKMGNAEIEPPKSIGTATAVTAQIIAQVASHIYGGTTINRIDEVLSPYVQISYEK 245 Query: 243 HRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWE 302 H K A+EWN+PD EGYA + KEC+DAFQSLEYEVNTLHT+NGQTPFVTFGFGLGTSW+ Sbjct: 246 HLKHAQEWNVPDVEGYAKALIEKECFDAFQSLEYEVNTLHTSNGQTPFVTFGFGLGTSWQ 305 Query: 303 SRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMY 362 SRLIQ++IL+NRI GLGKN KT VFPKLVF I+ GLN KGDPNYDIKQLALECASKRMY Sbjct: 306 SRLIQQAILKNRIRGLGKNHKTPVFPKLVFTIKKGLNQNKGDPNYDIKQLALECASKRMY 365 Query: 363 PDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKG 422 PDILNYDQVVKVTGSFK PMGCRSFLG +E E G +IHDGRNNLGV+SLNLPRIALE+K Sbjct: 366 PDILNYDQVVKVTGSFKAPMGCRSFLGAYE-EKGHEIHDGRNNLGVVSLNLPRIALESKN 424 Query: 423 DEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKN 482 +E F++ LDERL +A+KALMTRIARLE KARVAPILYMEGACGVRL AD++V++IFKN Sbjct: 425 EE-DFYRTLDERLAIAKKALMTRIARLENTKARVAPILYMEGACGVRLKADENVAQIFKN 483 Query: 483 GRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLY 542 GRASISLGYIGIHETINAL+ H++D+EQLR KGIAIV L +AV +W++ETGY FSLY Sbjct: 484 GRASISLGYIGIHETINALYNKGHIFDDEQLREKGIAIVRHLSEAVKRWQKETGYAFSLY 543 Query: 543 STPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLAN 602 STPSENLCDRFCRLDT +FGV+ GVTDKGYYTNS+HLDVEKKVNPYDK+DFE YPPLA+ Sbjct: 544 STPSENLCDRFCRLDTKKFGVIEGVTDKGYYTNSYHLDVEKKVNPYDKLDFEMTYPPLAS 603 Query: 603 GGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTC 662 GGFICYGEYPNIQHNLKALEDVWDYSY VPYYGTNTPIDECYECGFTGEFECTSKGF C Sbjct: 604 GGFICYGEYPNIQHNLKALEDVWDYSYDRVPYYGTNTPIDECYECGFTGEFECTSKGFVC 663 Query: 663 PKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 PKCGNHD+++VSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL Sbjct: 664 PKCGNHDSTKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 707 >UniRef50_Q032I4 Ribonucleoside-triphosphate reductase / ribonucleoside-triphosphate reductase class III catalytic subunit n=156 Tax=Bacteria RepID=Q032I4_LACLS Length = 747 Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/713 (51%), Positives = 489/713 (68%), Gaps = 9/713 (1%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDINEI 61 +V+KRDG V F SE+I +A+ +AAK E+ D + + V ++ R V I EI Sbjct: 16 NVIKRDGRSVKFNSEKIFDALTKAAKKVELTDMSVLSELTDRVVSEIFTRFSENVKIYEI 75 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 Q+ VE +L+ QLA YI YR +RD+ R K +N I L+ + + +++NENANKD Sbjct: 76 QSIVEQELLESGETQLAEEYISYRANRDLARTKATDINFTIEKLINR-DQTVVNENANKD 134 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 S V TQRDL AG V+K + LLP V AH++GDIHYHDLDYSPF M NC LID K Sbjct: 135 SNVFNTQRDLTAGAVSKAIGLK-LLPPQVANAHQKGDIHYHDLDYSPFTTMANCCLIDFK 193 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 M GFK+GNA+++ PKSI TATA +QIIA VAS YGG + +R DEVLAP+ +Y Sbjct: 194 NMFENGFKLGNAQVDSPKSIQTATAQASQIIANVASSQYGGCSFDRADEVLAPYAKLNYK 253 Query: 242 KHRKTAEEW--NIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT 299 KH K A++W E YA +T K+ YDA QSLEYE+NTL T+NGQTPFVT GFGLG Sbjct: 254 KHLKDAQKWIDGAEKQEAYAREKTAKDIYDAMQSLEYEINTLFTSNGQTPFVTVGFGLGD 313 Query: 300 SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASK 359 W +R IQ++IL RI GLG +TA+FPKL+F ++ GLN + G PNYDIK+LALEC++K Sbjct: 314 DWYAREIQKAILNVRIGGLGSEHRTAIFPKLIFTLKRGLNLEVGTPNYDIKELALECSTK 373 Query: 360 RMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALE 419 RMYPDIL+YD++V++TGSFK MGCRSFL W +ENG + GRNNLGV+++NLPRIALE Sbjct: 374 RMYPDILSYDKIVELTGSFKASMGCRSFLQGWRDENGNDVTAGRNNLGVVTVNLPRIALE 433 Query: 420 AKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEI 479 A G++ FW++ +ER+ +A AL R+ R + + + APIL+M GA G RL+A+ V E+ Sbjct: 434 AAGNKEKFWEIFNERIEIAHDALAFRVERAKEAQPKNAPILFMNGALG-RLDAEGSVDEL 492 Query: 480 FKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGF 539 + R+++SLGYIG++E + F G +N + +A I IV+R+ + + W + +GY + Sbjct: 493 YNKERSTVSLGYIGLYE-VATTFYGPTWENNPEAKAFTIEIVKRMHEDCEDWSKASGYHY 551 Query: 540 SLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPP 599 S+YSTPSE+L DRFCR+D +FG V +TDK YYTNSFH DV K P++K++FE YP Sbjct: 552 SVYSTPSESLTDRFCRMDKEKFGSVADITDKDYYTNSFHYDVRKNPTPFEKLEFEKDYPV 611 Query: 600 LANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKG 659 ANGGFI Y EYP +Q N KALE VWD++Y + Y GTN PID CY CGF G+F T +G Sbjct: 612 YANGGFIHYCEYPVLQQNPKALEAVWDFAYDRIGYLGTNAPIDHCYACGFEGDFAATERG 671 Query: 660 FTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 F CP+CGN D V +R CGYLG+P ARP G+ +E+ RVKH+ NG +G Sbjct: 672 FKCPQCGNDDPKTCDVVKRTCGYLGNPQARPMVHGRHKEISSRVKHM-NGSVG 723 >UniRef50_D1BHZ8 Ribonucleoside-triphosphate reductase class III catalytic subunit n=23 Tax=Bacteria RepID=D1BHZ8_SANKS Length = 754 Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/720 (51%), Positives = 476/720 (66%), Gaps = 11/720 (1%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR------N 54 + P V+KRDG + R++ A+ A V A ++EQ+ + Sbjct: 28 LAPAVLKRDGRVAEYDPARVERALTSAFADVHVGPAQLVRPAVLGLTEQVGAEIARRFTD 87 Query: 55 QVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLL 114 V I EIQ VE+ L+ + ++A AYI YR RD+ R + +N I L+ + +S++ Sbjct: 88 TVQIYEIQNVVEHVLLESRHYEVAEAYIAYRVRRDVARNRTTDVNHSIGELLSKA-SSVV 146 Query: 115 NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFN 174 NENANKDS V TQRDL AG V K +LP V AH++G+IHYHDLDY P+ PM N Sbjct: 147 NENANKDSDVFNTQRDLTAGAVGKAVGLT-MLPAHVANAHQKGEIHYHDLDYHPYSPMTN 205 Query: 175 CMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 234 C LID + ML +GF++GNAE+EPP+SI TATA QIIA V+S YGG T+NRIDE+LAP Sbjct: 206 CCLIDFRSMLGEGFRIGNAEVEPPRSIQTATAQITQIIANVSSSQYGGCTVNRIDELLAP 265 Query: 235 FVTASYNKHRKTAEEWNIPDAE--GYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT 292 + ++ KH A EW YA ++T K+ +DA QSLEYE+NTL T+NGQTPF + Sbjct: 266 YAERNFAKHLADAMEWVSEPGRRREYAEAKTRKDIHDAMQSLEYEINTLFTSNGQTPFTS 325 Query: 293 FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQL 352 GFGLGT W R IQ++ILR RI GLG +TA+FPKL+F +R G+N + GDPNYDIKQ Sbjct: 326 LGFGLGTGWFEREIQQAILRIRIEGLGGEHRTAIFPKLIFTLRRGVNLEAGDPNYDIKQT 385 Query: 353 ALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLN 412 ALEC++KRMYPD+L+YD++V++TGSFK PMGCRSFL WE+E+GE + +GR NLGV++LN Sbjct: 386 ALECSTKRMYPDVLSYDKIVELTGSFKAPMGCRSFLQGWEDEHGEDVVEGRMNLGVVTLN 445 Query: 413 LPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNA 472 LPRIALE+ G TFW LLDERL R AL+ R+ R APILY GA G RL+ Sbjct: 446 LPRIALESHGSTETFWALLDERLDTVRDALLFRVDRCREATPGNAPILYRYGAFGQRLDP 505 Query: 473 DDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK 532 D+ V +F++GRA++SLGYIG++ET A FGG D + + I+ L QW Sbjct: 506 DEAVDTLFRDGRATVSLGYIGLYETAAAFFGGAWEGD-AAAKDFTLDILGTLAARAQQWT 564 Query: 533 EETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKID 592 E Y FS+YSTPSE+L DRFCRLD A+FG V +TDK YYTNSFH DV K P++K+D Sbjct: 565 NEHSYKFSVYSTPSESLTDRFCRLDKAKFGSVEDITDKDYYTNSFHYDVRKNPTPFEKLD 624 Query: 593 FEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGE 652 FE YP L GGFI Y EYP +QHN +ALE VWDY+Y V Y GTNTPID CY CGF+G+ Sbjct: 625 FEKDYPQLTAGGFIHYCEYPILQHNPRALEAVWDYAYDRVGYLGTNTPIDRCYACGFSGD 684 Query: 653 FECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 F T++GF CP C N D V +R CGYLG+P ARP G+ E+ RVKH+ G G Sbjct: 685 FTPTARGFACPGCDNSDPRTCDVVKRTCGYLGNPQARPMVHGRHVEISSRVKHMPAGDEG 744 >UniRef50_D2RBY9 Anaerobic ribonucleoside-triphosphate reductase n=12 Tax=Bacteria RepID=D2RBY9_GARVA Length = 805 Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/766 (46%), Positives = 474/766 (61%), Gaps = 62/766 (8%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAK--AAEV--DDADYCATVAAVVSEQMQGR--NQVD 57 V KRDG V F I AI A K E+ + ++ + ++Q R Sbjct: 28 QVEKRDGRVVDFDPLNIIMAIKAAFKDLGKEIGPQEEQLIRNISDHIEAEIQDRYNGPAK 87 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 I +IQT VE+ L+ ++AR Y YR +RDI+R + +N+ + LV + + SL+ EN Sbjct: 88 IEDIQTLVEHSLIENHLYEVARCYTSYRLNRDIDRARATDINEAVNRLVNR-DESLVREN 146 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 ANKDS V TQRDLLAG V+K A +LP V AH +GDIH+HD DYSPF M NC L Sbjct: 147 ANKDSNVYATQRDLLAGAVSKASAFS-MLPHAVSNAHMKGDIHFHDADYSPFTCMSNCSL 205 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 D ML +GF +GNA ++ PKSI TA QII +A YGG T+NR DE+L P+ Sbjct: 206 PDFGDMLAKGFALGNAMMDSPKSIGTAATQVTQIIKDIAGAQYGGQTVNRADEMLEPYAK 265 Query: 238 ASYNKHRKTAEEWNIPDA------------------------------------------ 255 Y+K+ A IPD+ Sbjct: 266 CDYDKNLAMAHAM-IPDSTPIQVAKDMIDGLKAQEPKNLHCLDRDPLPADTPFDENLSEL 324 Query: 256 ----EGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESIL 311 E YA T K YDA Q++EY++N+ +NGQTPFVT GFGLGTSW +R IQ +IL Sbjct: 325 DQLREVYAKIMTRKAIYDAMQTMEYQINSNRVSNGQTPFVTVGFGLGTSWFAREIQRAIL 384 Query: 312 RNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQV 371 NRI GLGK+R TA+FPKLVF I+ G+N GDPNYD+KQLALEC++KRMYPD++ Y+ + Sbjct: 385 LNRIRGLGKDRHTAIFPKLVFTIKHGVNADAGDPNYDLKQLALECSTKRMYPDVVFYENI 444 Query: 372 VKVTGSFKTPMGCRSFLGVW-ENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKL 430 VK+TGSFK PMGCRSFL W + + G+ + DGR NLGV+++N+PRIALE+ GD FWKL Sbjct: 445 VKITGSFKAPMGCRSFLQGWIDPKTGKDVEDGRMNLGVVTVNMPRIALESHGDVTRFWKL 504 Query: 431 LDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLG 490 DER+ +A +AL RI R + AP L+ GA G RL A++ V ++F+N RA++SLG Sbjct: 505 FDERMEVAHQALRFRIMRCKQATPVNAPTLFRYGAFG-RLEANESVDQLFRNERATVSLG 563 Query: 491 YIGIHETINALFGGEHVYD---NEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSE 547 YIG++ET FG + + D NE+ + +++V R+ + QW + GY +S+YSTP+E Sbjct: 564 YIGLYETTAVFFGKDWMQDHSWNEEGKEFALSLVRRMNKLCQQWSKAEGYHYSVYSTPAE 623 Query: 548 NLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFIC 607 +L DRF R+D +FG + GVTD +YTNSFH V + P +K+ +E +P LA+GGFI Sbjct: 624 SLTDRFNRMDRQKFGRIEGVTDHDFYTNSFHYPVWLQPTPMEKLRYEVDFPYLASGGFIN 683 Query: 608 YGEYPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCG 666 Y E+P +Q N KALE VWDY+Y+ + Y GTNTPID C+ CGF G+FE T +GF CP+CG Sbjct: 684 YCEFPCLQANPKALEAVWDYAYKIGIGYLGTNTPIDHCFVCGFQGDFEPTKEGFRCPECG 743 Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 N D + +VT+R CGYLG+P RP G+ EE+ RVKH+ +G+ G Sbjct: 744 NSDPDKCNVTKRTCGYLGNPVQRPMVHGRHEEIAHRVKHM-SGETG 788 >UniRef50_B8DWG9 Anaerobic ribonucleoside-triphosphate reductase n=15 Tax=Bacteria RepID=B8DWG9_BIFA0 Length = 808 Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/766 (45%), Positives = 463/766 (60%), Gaps = 64/766 (8%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR------NQVDI 58 V KRDG V F I A+ A + + + ++ Q++G I Sbjct: 32 VEKRDGRVVDFDPVNIVVAVKSAFADLDKEVGPQEERMILDIANQIEGEIRERYNGPAKI 91 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 +IQ VE+ L+ ++AR Y YR ++DI+R K +N+ + LV + + SL+ ENA Sbjct: 92 EDIQNLVEHALIEDHLYEVARTYTNYRLNKDIQRAKATDINEAVSRLVNR-DESLVRENA 150 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 NKDS V TQRDLLAG V+K A +LP V AH +GDIH+HD DYSPF M NC L Sbjct: 151 NKDSNVYATQRDLLAGAVSKASAFS-MLPDAVANAHMKGDIHFHDADYSPFTSMNNCSLP 209 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 D ML GF +GNA ++ PKSI TA+ QII +A YGG T+NR DE+L + Sbjct: 210 DFGDMLKHGFALGNAMMDSPKSIGTASTQITQIIKDIAGAQYGGQTVNRADEMLEEYAKR 269 Query: 239 SYNKHRKTAEEWNIPDA------------------------------------------- 255 Y K+ A IPD+ Sbjct: 270 DYVKNLDMAHAM-IPDSTPIEVARDMVAGLKAQEPRWLHFENREPLPADEAFDTNAPELE 328 Query: 256 ---EGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILR 312 E YA T K YDA Q++EY++N+ +NGQTPFVT GFGLG SW +R IQ +IL Sbjct: 329 QIREIYAKIMTRKAIYDAMQTMEYQINSNRVSNGQTPFVTVGFGLGMSWFAREIQRAILL 388 Query: 313 NRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVV 372 NRI GLGK R TA+FPKLVF ++ G+N +GDPNYD+KQLALECA+KRMYPD++ YD +V Sbjct: 389 NRIRGLGKERHTAIFPKLVFTVKHGVNADEGDPNYDLKQLALECATKRMYPDVVFYDNIV 448 Query: 373 KVTGSFKTPMGCRSFLGVW-ENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLL 431 K+TGSFK PMGCRSFL W + + G+ + DGR NLGV+++N+PRIALE+ GD FWK+ Sbjct: 449 KITGSFKAPMGCRSFLQGWIDPKTGKDVEDGRMNLGVVTVNVPRIALESHGDVERFWKIF 508 Query: 432 DERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGY 491 DER+ +A +AL RI R + AP L+ GA G RL +++V ++F+N RA++SLGY Sbjct: 509 DERMEVAHQALQFRIMRCKQATPVNAPTLFRYGAFG-RLETNENVDQLFRNERATVSLGY 567 Query: 492 IGIHETINALFGG----EHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSE 547 IG++E FG +H +D E + ++IV R+ + QW + GY +S+YSTP+E Sbjct: 568 IGLYEATAVFFGKDWMRDHAWDPEG-KDFALSIVRRMNELCKQWSKAEGYHYSVYSTPAE 626 Query: 548 NLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFIC 607 +L DRF R+D +FG V GVTD +YTNSFH V + P +K+D+E +P A+GGFI Sbjct: 627 SLTDRFNRMDRKKFGKVEGVTDHDFYTNSFHYPVWLQPTPMEKLDYEKDFPYYASGGFIN 686 Query: 608 YGEYPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCG 666 Y E+P +Q N KALE VWDY+Y + Y GTNTPID C+ CGF G+F T +GF CP+CG Sbjct: 687 YCEFPCLQANPKALEAVWDYAYNIGIGYLGTNTPIDHCFVCGFEGDFAPTEEGFKCPECG 746 Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 N D + +VT+R CGYLG+P RP G+ EE+ RVKH+ G+ G Sbjct: 747 NSDPDKCNVTKRTCGYLGNPVQRPMVHGRHEEIAHRVKHMA-GETG 791 >UniRef50_D1BVJ9 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BVJ9_XYLCX Length = 765 Score = 632 bits (1629), Expect = e-179, Method: Compositional matrix adjust. Identities = 341/737 (46%), Positives = 450/737 (61%), Gaps = 40/737 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAI----LRAAKAAEVDDADYCATVAAVVSEQMQG-RNQVD 57 P V+KRDG + + R+++AI +RA A VD+++ A VAAV E + V Sbjct: 23 PTVIKRDGTRTTYDLRRVRDAIRPAWMRAWDDA-VDESELAAVVAAVDGEIFRRFPTDVK 81 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 + EIQ VE L+ + +A Y YR ++D+ R++ + ++ L T++ + NEN Sbjct: 82 VYEIQAIVEQTLIETGHGDVAEIYATYRLEKDLRRKQAFSVEHQVGRL---TDSEVANEN 138 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 ANKDS+V QRD +AG VAK L PR V AH +G IH+HDLDYSP+ P NC L Sbjct: 139 ANKDSRVFHVQRDRMAGSVAKARGLAMLPPR-VASAHIKGQIHFHDLDYSPYTPFNNCDL 197 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 + ML GF MGNA++E PKSI TA + AQ+I V+S YGG TI ID +LAP+ Sbjct: 198 PNFADMLANGFTMGNAQVESPKSIETAASQLAQLIIAVSSSQYGGVTIETIDLLLAPYAE 257 Query: 238 ASYNKHRKTAEEW--NIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF 295 SY KH TA +W + D + YA TIKE YD+ Q+L + VNT + GQTPFV+ G Sbjct: 258 KSYQKHLATAAKWIRDESDRDAYARDLTIKEIYDSAQTLLFNVNTTASTQGQTPFVSIGL 317 Query: 296 GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALE 355 GLGTSW R IQ+++ + GLG +T VFPKL+F ++ G+N + DPNYDIKQLA+ Sbjct: 318 GLGTSWLEREIQKAVFAVQEKGLGAEGRTPVFPKLIFTLKRGVNLEPTDPNYDIKQLAVR 377 Query: 356 CASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWEN-ENGEQIHDGRNNLGVISLNLP 414 CA+KRMYPD++ YD +VK+TGS+KT MGCRS L + N + GEQ GR NLGV++LNLP Sbjct: 378 CATKRMYPDVVLYDNIVKITGSYKTAMGCRSHLSAYVNPQTGEQETVGRMNLGVVTLNLP 437 Query: 415 RIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADD 474 RIALE++GD FW+LLD RL + +AL R AR+ APILY G + D+ Sbjct: 438 RIALESRGDTEEFWRLLDGRLEICHEALRFREARVRQAVPENAPILYKSGGFARLEDGDN 497 Query: 475 D-VSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK- 532 D + +F NGRA++SLGYIG++E F G NEQ + I ++ ++ D W Sbjct: 498 DGLGRLFDNGRATLSLGYIGLYEVATVFF-GRRWETNEQAKQFTIDVLAHMKSKCDAWNA 556 Query: 533 --------EETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG----YYTNSFHLD 580 + G S+YSTPSE+L DRF ++D FGVVP VTDKG YY NSFHLD Sbjct: 557 ADFSGTGGKVAGASISVYSTPSESLTDRFAKMDRERFGVVPDVTDKGSGRTYYVNSFHLD 616 Query: 581 VE----KKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH-VPYY 635 P+ K+DFEAPY P +GGFI Y E+PN+++N KA+E VWDY+Y H + Y Sbjct: 617 PRLGEADGWGPFRKLDFEAPYAPYTSGGFIHYTEWPNVRNNPKAVEAVWDYAYDHDIGYM 676 Query: 636 GTNTPIDECYECGFTGEFECTSKGFTCPKCGN-------HDASRVSVTRRVCGYLGSPDA 688 G N PID C+ CG+ G+F ++GFTCP CGN D V V RRVCGYL P A Sbjct: 677 GVNVPIDRCFRCGYEGDFVAANEGFTCPVCGNTGRIENGDDPDSVEVIRRVCGYLSEPVA 736 Query: 689 RPFNAGKQEEVKRRVKH 705 R G+Q E+ RV H Sbjct: 737 RGVARGRQHELADRVNH 753 >UniRef50_Q6QGI8 Putative anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Enterobacteria phage T5 RepID=Q6QGI8_BPT5 Length = 574 Score = 591 bits (1524), Expect = e-167, Method: Compositional matrix adjust. Identities = 306/595 (51%), Positives = 395/595 (66%), Gaps = 59/595 (9%) Query: 113 LLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPM 172 LL NANK S+ PTQRD+LAG ++K+ + + P + AH GDIH+HD DY+ M Sbjct: 31 LLFNNANKPSERFPTQRDMLAGELSKYLILEEM-PVQIRNAHMIGDIHFHDADYAAL-GM 88 Query: 173 FNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVL 232 NC L+ L+ ML G K+GNAEI P SI+TA A+TAQII QV+SH YGGT+++R+DEVL Sbjct: 89 TNCCLVALEDMLKNGMKVGNAEISTPNSITTAAAITAQIITQVSSHQYGGTSVDRLDEVL 148 Query: 233 APFVTASYNKHRKTAEEWNIPDAEG--YANSRTIKECYDAFQSLEYEVNTLHTANGQTPF 290 AP+V SY+K+ A+ W +A+ A T KE YDA Q LEYE+NT+ +NGQ+PF Sbjct: 149 APYVRKSYDKNHAFAKRWTKDEAKASVMATEMTEKEVYDACQGLEYEINTMFNSNGQSPF 208 Query: 291 VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIK 350 +TFGFGLGTSWE+RLIQ++IL+ R+ GLG N++TA+FPKLVF +RDG+N K GD NYDIK Sbjct: 209 ITFGFGLGTSWEARLIQKAILKVRMDGLGINKRTAIFPKLVFVLRDGVNMKPGDVNYDIK 268 Query: 351 QLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVIS 410 +LA++C ++RMYPD ++YD+VV+VTG +K MGCRSFL E+GE GRNNLGV+S Sbjct: 269 KLAMKCTAERMYPDYISYDKVVEVTGDYKVSMGCRSFLAA--TEDGETA--GRNNLGVVS 324 Query: 411 LNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRL 470 +NLPRIA+EA+G+ F+ LL+ R+ A KAL R+ RL+ ++A+ APILYM GA G+RL Sbjct: 325 VNLPRIAIEAEGNIDLFFDLLELRVDTALKALEWRVDRLKYIQAKAAPILYMSGAFGLRL 384 Query: 471 NADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQ 530 D E+V+D Q Sbjct: 385 GPD-------------------------------EYVFD--------------------Q 393 Query: 531 WKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDK 590 KEET G+SLY+TPSE+LCDRFCRLD F + KGYYTNS HLDVE+KV P K Sbjct: 394 KKEETKLGYSLYATPSESLCDRFCRLDREYFPEHEDILSKGYYTNSHHLDVERKVAPNVK 453 Query: 591 IDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFT 650 D+E+ + P+A+GG I Y E P+++ ALE V +Y+ V Y+G NTP+D C +CGF Sbjct: 454 FDYESNFTPIASGGCISYVELPDMKRFPDALEWVINYAASKVHYFGINTPVDSCGKCGFL 513 Query: 651 GEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 GE + GF CP CGNHD + VTRRVCGYLG+P ARPFN GKQ EV RVKH Sbjct: 514 GETVASEDGFKCPICGNHDPETLEVTRRVCGYLGNPGARPFNPGKQHEVMGRVKH 568 >UniRef50_UPI0001BC56DE anaerobic ribonucleoside triphosphate reductase n=3 Tax=Fusobacterium RepID=UPI0001BC56DE Length = 750 Score = 581 bits (1498), Expect = e-164, Method: Compositional matrix adjust. Identities = 306/735 (41%), Positives = 440/735 (59%), Gaps = 37/735 (5%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKA-AEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 V+KRDG + F ++RI AI A K + V + + +A + E ++ + + + EIQ Sbjct: 21 VIKRDGTVIDFDAQRIVNAISMAFKQHSRVIPEELVSKIAHQI-ENLENK-IMSVEEIQD 78 Query: 64 AVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSK 123 V +LM+ K +A AY YR + R K + ++I LV+ +N SLL ENANKD+K Sbjct: 79 LVVKKLMASSEKDIAMAYQSYRTLKTEIRNKEKSIYKQIGELVDASNESLLIENANKDAK 138 Query: 124 VIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGM 183 I QRDLLAGI ++ Y ++PR + +AH +G+IH HDLDY F NC L++++ M Sbjct: 139 TISVQRDLLAGISSRDYYLNKIVPRHIKEAHIKGEIHLHDLDY-LLFRETNCELVNIERM 197 Query: 184 LTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKH 243 L G +GNA++ P S+ A QIIA V+S+ YGG +I +D L P++ S+ KH Sbjct: 198 LKGGCNIGNAKMLEPNSVDVAVGHIIQIIASVSSNTYGGCSIPYLDRALVPYIQKSFYKH 257 Query: 244 RK------------TAEEW------------------NIPDAEGYANSRTIKECYDAFQS 273 K AEE P A YA T + A Q Sbjct: 258 FKRGLYYTENMNEEKAEEILASYGRTGIIYDNQELKEKYPKAYRYAADLTEESVKQAMQG 317 Query: 274 LEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFA 333 LEYE+N+L T NGQTPF T G G TSWE RL+Q+ + + R+ G GKN++TA+FPK+ +A Sbjct: 318 LEYEINSLSTVNGQTPFTTIGIGTETSWEGRLVQKYVFKTRMDGFGKNKETAIFPKIAYA 377 Query: 334 IRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWEN 393 + + LN PN+DI QLA EC +K +YPDIL Q G+ PMGCR+FL W+N Sbjct: 378 MTEKLNLNPDSPNWDIAQLAFECMTKSIYPDILFITQEQWEQGTVVYPMGCRAFLSPWKN 437 Query: 394 ENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVK 453 E G++I+ GR N G S+NLPR+A++ GDE F++ LD L + ++ + R LE Sbjct: 438 EEGKEIYAGRFNFGATSMNLPRMAIKNPGDEKGFYRELDRVLEICKENCIFRAKYLEKTT 497 Query: 454 ARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQL 513 A +APIL+M GA + + ++++ G A++S+GYIG+ E L+G + D E++ Sbjct: 498 ADIAPILWMYGALAEK-EEKETIADLIWGGYATVSIGYIGLSEVSQLLYGKDFAQD-EEV 555 Query: 514 RAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYY 573 K AI++ + ++Q+K ETG GF++Y TPSE+LCDRF ++D EFG +PG+TDKGYY Sbjct: 556 YKKSFAILKYIADKLEQFKAETGLGFAMYGTPSESLCDRFAKMDQKEFGDIPGITDKGYY 615 Query: 574 TNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ-HV 632 NSFH+ K++ ++K+ EA + GG I Y E ++Q N++A+ + Y+ + Sbjct: 616 DNSFHVSSRLKMDQFEKLRLEALGHQYSKGGHISYIETDSLQKNIEAIPAILRYAKSVGI 675 Query: 633 PYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFN 692 Y G N P+D+CY CG+ GEF T GFTCP+CGNHD ++SV RRVCGYL P+ARPFN Sbjct: 676 HYMGINQPVDKCYVCGYKGEFSATENGFTCPQCGNHDNKKMSVIRRVCGYLAQPNARPFN 735 Query: 693 AGKQEEVKRRVKHLG 707 GKQ+E+ RVKH G Sbjct: 736 KGKQKEIMSRVKHNG 750 >UniRef50_C3WCA1 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCA1_FUSMR Length = 729 Score = 577 bits (1487), Expect = e-163, Method: Compositional matrix adjust. Identities = 301/729 (41%), Positives = 435/729 (59%), Gaps = 32/729 (4%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+KRDG V F +RI A+ A K + + E M + ++ + +IQ Sbjct: 4 VIKRDGAIVEFDRDRIVRAMTMAFKQSSGTVNNELVEKITTQIENMDNK-RMHVEDIQDI 62 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKV 124 V +LM+ K +A AY YR + R K + + I LV+ +N +L+ENANKD+K Sbjct: 63 VVKKLMASSEKDIAIAYQSYRAIKTEIRNKEKGIYKNIAELVDASNEDILSENANKDAKT 122 Query: 125 IPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGML 184 I QRDLLAGI +K Y +LP+ + +AHE G+IH HDLDY F NC L+ ++ ML Sbjct: 123 ISVQRDLLAGISSKDYYLNKILPKHLKKAHETGEIHIHDLDY-LLFKETNCELVHIERML 181 Query: 185 TQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKH- 243 G +GNA++ P S+ A QIIA V+S+ YGG +I +D L P++ S+ KH Sbjct: 182 KGGCNIGNAKMLEPNSVDVAVGHIVQIIASVSSNTYGGCSIPYLDRALVPYIKKSFKKHF 241 Query: 244 ---------------RKTAEEWNI-----------PDAEGYANSRTIKECYDAFQSLEYE 277 ++ + NI P A Y+ T + A Q LEYE Sbjct: 242 TKGLKYVERVDEATIKEIIDRGNIEYSNMELKEKYPLAYEYSCDLTRESVKQAMQGLEYE 301 Query: 278 VNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDG 337 +N+L T NGQTPF T G G TSWE RL+QE + R R+ G G ++TA+FPK+V+A+ +G Sbjct: 302 INSLSTVNGQTPFTTIGIGTETSWEGRLVQEFVFRTRMEGFGAKKETAIFPKIVYAMCEG 361 Query: 338 LNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGE 397 LN + DPN+DI QL EC +K +YPDIL + G+ PMGCR+FL W +E GE Sbjct: 362 LNMNEEDPNWDIAQLGFECMTKSIYPDILFITKEQLEKGTVVYPMGCRAFLSPWFDEKGE 421 Query: 398 QIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVA 457 +I+ GR N+G ++NLPRIA++ +GDEA F+K LD + + ++ + R LE +A +A Sbjct: 422 EIYSGRFNIGATTINLPRIAIKNRGDEAGFYKELDRVMEMCKENSVFRAHYLEKTQAEMA 481 Query: 458 PILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKG 517 PIL+ GA + + + ++ G A++S+GYIG+ E L+G + Y NE++ K Sbjct: 482 PILWQSGALAEK-QPKETIKDLIWGGYATVSIGYIGLSEVSQLLYGEDFAY-NEEIYEKT 539 Query: 518 IAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSF 577 I++ + + V Q+K ET GF+LY TPSE+LCDRF R+D EFG + G+TDKGYY NSF Sbjct: 540 FNILKYISEKVAQFKAETNLGFALYGTPSESLCDRFARIDREEFGDIEGITDKGYYDNSF 599 Query: 578 HLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ-HVPYYG 636 H+ +NP++K+ EA + GG I Y E ++++NL+A+ ++ Y+ + + Y G Sbjct: 600 HVSSHININPFEKLRLEALGHQYSKGGHISYIETDSLKNNLEAIIEILRYAKEIGIHYMG 659 Query: 637 TNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQ 696 N P+D+C+ CGF GEF T +GF CP+CGNH+ ++SV RRVCGYL P+ARPFN GKQ Sbjct: 660 INQPVDKCHVCGFKGEFLATERGFECPQCGNHENDKMSVIRRVCGYLSQPNARPFNKGKQ 719 Query: 697 EEVKRRVKH 705 +E+ RVKH Sbjct: 720 KEIISRVKH 728 >UniRef50_B3RGP7 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Viruses RepID=B3RGP7_9CAUD Length = 707 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 307/714 (42%), Positives = 440/714 (61%), Gaps = 22/714 (3%) Query: 5 VMKRDGCKVPFKSERI----KEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 V+KRDG + + ++ + A+L + E CA V + + + + Sbjct: 3 VVKRDGREEFYNGIKVIKAAESALLESGHTEEEAYRIACAVNEVVANNLPTDQCTISVKN 62 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 I VE+ LM K AR YI+YR RD RE G+L +I G +++T ENA K Sbjct: 63 IHILVEDALMDMGLKCAAREYIQYRQTRDNNREAGGKLLADISGFLDRTCDEFTKENAIK 122 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 + + T RDLLAGI++KH A +LP V + H RG IH HDLDY P+ NC L++ Sbjct: 123 PTIHVHTHRDLLAGILSKHLASTQILPDRVSEEHNRGFIHVHDLDYL-ISPLTNCCLVNY 181 Query: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY 240 ML GF +GNA + PKSI AT + +QI + VAS YGG T++ ID LA + A+Y Sbjct: 182 PDMLENGFNIGNAHVSKPKSIGVATTILSQISSAVASAQYGGQTMSHIDHYLAQYAEATY 241 Query: 241 NKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 K+ K +E +PDAE A T K+ +D+ Q+L Y++NTL + NGQTPF+T GL TS Sbjct: 242 EKNLKFCQEHWLPDAETVAMQMTDKDVFDSMQTLLYQINTLTSVNGQTPFITLSLGLDTS 301 Query: 301 WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR 360 R+I ++ L+ GLG+ R T VFPK++F + +G+N GDPNYD+K+LALEC+++R Sbjct: 302 VFGRMITKNYLKVHKMGLGEERITPVFPKVLFFLEEGVNMNPGDPNYDLKRLALECSAER 361 Query: 361 MYPDILNYDQVVKVTGSFK---TPMGCRSFLGVWEN-ENGEQIHDGRNNLGVISLNLPRI 416 +YPD ++ KVTGS T MGCRSFL + + E GE+ + GR NLGV+SLNLP I Sbjct: 362 IYPDFVSVPLNRKVTGSTDGKVTSMGCRSFLSKYNDLETGEEKYLGRFNLGVVSLNLPMI 421 Query: 417 ALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDV 476 A +AK + F+ +LDE L LA +A + R+ RL+G KA PI++ EGA RL+ ++ + Sbjct: 422 AAKAKTEGVDFFAVLDEYLDLAYEAHLVRVNRLKGTKAGQNPIMWCEGALA-RLDPEESI 480 Query: 477 SEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETG 536 ++F +G ASIS+GYIG++ET L E +A + I++ +R A +++K+E+ Sbjct: 481 DKLFYDGYASISIGYIGVYETCQIL-------GREGDKALALGILQHMRDACERYKKESR 533 Query: 537 YGFSLYSTPSENLCDRFCRLDTAEFGVVPGVT--DKGYYTNSFHLDVEKKVNPYDKIDFE 594 FSLY TPSE+LC + E+ P V + Y TNSFH V +P+DK ++E Sbjct: 534 LAFSLYGTPSESLCYKAATCLDREY---PEVLKHEHEYLTNSFHQPVWINSSPFDKWEYE 590 Query: 595 APYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFE 654 + +++GG I Y E PN+++NL ALE + D+ Y+H+ Y+G N P+D+C +CGF+GEF Sbjct: 591 EGFAMISSGGNIGYVETPNLKNNLDALEALVDFGYKHIMYFGINQPVDKCLKCGFSGEFS 650 Query: 655 CTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGN 708 T+KGF CP+CGNH+ +SV RRV GYL SP++RP+N GKQ EV RVKH G+ Sbjct: 651 ATAKGFVCPECGNHEEGTISVIRRVSGYLSSPNSRPYNKGKQAEVIERVKHYGS 704 >UniRef50_Q7P4N7 Anaerobic ribonucleoside-triphosphate reductase n=10 Tax=Fusobacterium RepID=Q7P4N7_FUSNV Length = 728 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 297/728 (40%), Positives = 431/728 (59%), Gaps = 31/728 (4%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+KRDG V F RI AI + + A + A E + + + + +IQ Sbjct: 4 VIKRDGSVVEFDKSRIINAIKKTFEQASREPNMKLIEKIASQVEDLPDK-VLAVEQIQDI 62 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKV 124 V +LM K +A +Y YR + REK + ++I LV+ +N LL+ENANKD+K Sbjct: 63 VVKKLMGSSEKDIAMSYQSYRTLKAEIREKEKGIYRQIGELVDASNEKLLSENANKDAKT 122 Query: 125 IPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGML 184 I QRDLLAGI ++ Y ++P + AH +G+IH HDLDY F NC L++++ ML Sbjct: 123 ISVQRDLLAGISSRDYYLNKIVPEHIKLAHIKGEIHLHDLDY-LLFRETNCELVNIETML 181 Query: 185 TQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKH- 243 G +GNA++ P S+ A QIIA V+S+ YGG +I +D L ++ ++ KH Sbjct: 182 RGGCNIGNAKMLEPNSVDVAVGHIVQIIASVSSNTYGGCSIPYLDRALVRYIKKTFKKHF 241 Query: 244 -----------RKTAEEWNIPDAE--------------GYANSRTIKECYDAFQSLEYEV 278 + EE D E Y+ T + A Q LEYE+ Sbjct: 242 LRGVKYIDDLNEEQIEELKKQDLEYLNEEIKNKYPKTYEYSVDMTEESVKQAMQGLEYEI 301 Query: 279 NTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGL 338 N+L T NGQTPF T G G TSWE RL+Q+ +L+ R+AG G ++TA+FPK+V+A+ +GL Sbjct: 302 NSLSTVNGQTPFTTIGIGTETSWEGRLVQKYVLKTRMAGFGAKKETAIFPKIVYAMCEGL 361 Query: 339 NHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQ 398 N +GDPN+DI QLA EC +K +YPDIL + PMGCR+FL +W++ENG++ Sbjct: 362 NLNEGDPNWDISQLAFECMTKSIYPDILFITPEQLKNETVVYPMGCRAFLSLWKDENGKE 421 Query: 399 IHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAP 458 + GR N+G S+NLPRIA++ +GDE F+K LD L + + + R LE A +AP Sbjct: 422 KYAGRFNIGATSINLPRIAIKNRGDEEGFYKELDRILEICKDNCLFRARYLENTVAEMAP 481 Query: 459 ILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGI 518 IL+M GA + D + ++ G +++S+GYIG+ E ++ L G+ ++E++ K Sbjct: 482 ILWMSGALAEK-KPKDTIKDLIWGGYSTVSIGYIGLSE-VSQLLYGKDFSESEEVYQKTF 539 Query: 519 AIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFH 578 I++ + V ++KE+ GF+LY TPSE+LCDRF R+D EFG + G+TDKGYY NSFH Sbjct: 540 NILKYIADKVLEYKEKYNLGFALYGTPSESLCDRFARIDKQEFGDIKGITDKGYYDNSFH 599 Query: 579 LDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ-HVPYYGT 637 + ++P++K+ EA + GG I Y E ++ NL A+ D+ Y+ + Y G Sbjct: 600 VSSRINMSPFEKLRLEALGHKYSAGGHISYIETDSLTKNLDAIPDILRYAKSVGIHYMGI 659 Query: 638 NTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQE 697 N P+D+C+ CG+ GEF T +GFTCP+CGNHD++ +SV RRVCGYL P+ARPFN GKQE Sbjct: 660 NQPVDKCHICGYKGEFTATKEGFTCPQCGNHDSNEMSVIRRVCGYLSQPNARPFNKGKQE 719 Query: 698 EVKRRVKH 705 E+ RVKH Sbjct: 720 EIMHRVKH 727 >UniRef50_B1BE54 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BE54_CLOBO Length = 705 Score = 547 bits (1410), Expect = e-154, Method: Compositional matrix adjust. Identities = 299/713 (41%), Positives = 438/713 (61%), Gaps = 16/713 (2%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQGRNQVDIN 59 M V+KRDG +V F RI AI A K + + D +A +SE ++++ + Sbjct: 1 MIKTVIKRDGREVEFNINRIVNAIELAMKDTKQGIEKDLSVHIANDISEI--NKDKITVE 58 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 EIQ VE++LM K +A+ YI+YR++R R+ + + ++++ + + +NAN Sbjct: 59 EIQDLVEDKLMDSR-KDVAKEYIKYRNERTKARDSKSNVFEKMQDTFDMKSEDN-RDNAN 116 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 K + T R ++A I + +AR +P +++ H++ I+ HD +Y P FNC+LI+ Sbjct: 117 KAGDKLQTYRAMIADIACREFARTKTIPEKILKEHKKT-IYNHDENYMCL-PFFNCILIN 174 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 + ML +GFK+G IE PKSI+TA A+ +QI+A V+S+ YGG T+ IDE L + S Sbjct: 175 YRDML-KGFKVGMTPIETPKSITTAIAILSQIVAHVSSNCYGGNTLAEIDEGLEIYAKRS 233 Query: 240 YNKHRKTAEEWNIPDAEGYANSRTI--KECYDAFQSLEYEVNTLHTANGQTPFVTFGFGL 297 Y KH +T +W + + KE YDA Q EYE+ TL + G+ PF+T FG Sbjct: 234 YKKHFRTGMKWLKNKKKAKKYAWEKLEKEVYDACQGFEYEIQTLTNSRGEVPFLTITFGK 293 Query: 298 GTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECA 357 G RLIQES L+ RI GL T VFPK+ F ++ GLN + DP YDI QLAL+C Sbjct: 294 GRGKFCRLIQESYLKVRIDGLTGGI-TPVFPKICFILKRGLNLEPQDPQYDIYQLALKCT 352 Query: 358 SKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIA 417 SKR+YPD L YD+VV++TG FK+PM CRSFL +++ENG DGR N GV S+NL R+A Sbjct: 353 SKRIYPDYLMYDRVVEITGDFKSPMSCRSFLSTYKDENGHIKTDGRFNQGVCSINLVRLA 412 Query: 418 LEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVS 477 +++KGDE F++LL L L ++ALM R L+G+KA+ APILYM GA RLN +D + Sbjct: 413 IQSKGDENKFFELLHNALDLTKEALMFRHNMLKGIKAKQAPILYMNGAVA-RLNPEDAID 471 Query: 478 EIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGY 537 ++ N +SIS+GY+G+H + AL+G + Y++E++ KG I++ LR D+ K+ET Sbjct: 472 KLLYNNYSSISIGYVGLHNCMVALYGKSY-YESEEMLQKGAKIMQYLRDYCDEAKKETTI 530 Query: 538 GFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPY 597 GFSLYSTP+E L +FC+ D +FG++ GV D+GYY NSFH K + P++KID E+ Y Sbjct: 531 GFSLYSTPAETLATKFCKEDVKDFGLIEGVNDQGYYENSFHYPSNKDITPFEKIDLESHY 590 Query: 598 PPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFEC-- 655 +A+GG I Y E+ N+++NL+ALE + Y+Y Y+G N D C +CG+ G Sbjct: 591 SKIASGGAIQYVEFGNMENNLEALEKIVTYAYDKCHYFGVNVRPDRCLKCGYKGVINPQH 650 Query: 656 -TSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLG 707 T + CP+CGN D +++ R+CGY+GS RP K +E+ RV H G Sbjct: 651 ETENDYICPQCGNTDPLTMNICIRLCGYIGSLSERPTIDNKMKEMHNRVVHCG 703 >UniRef50_C8NQX8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Corynebacterium efficiens RepID=C8NQX8_COREF Length = 728 Score = 538 bits (1385), Expect = e-151, Method: Compositional matrix adjust. Identities = 284/718 (39%), Positives = 415/718 (57%), Gaps = 23/718 (3%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+K+DG V ++ +I ++ A + + + ++ ++ + + ++ Sbjct: 18 VLKKDGRVVDYRPRKILNSLEAAERTSGEPLHAPSDQLLGEITRRVAEHHIISTEDLSRL 77 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKV 124 VE L P + AY +Y+ ++ + + I G+VE +A +L EN NKD++ Sbjct: 78 VEQTLAQSP--AVLAAYRDYQRRQEEKINSSTDITHAITGVVE-GDAKILAENGNKDART 134 Query: 125 IPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGML 184 TQR++LAG V+K Q +LP D+ +AH +G IH HDLD SPF M NC L D +L Sbjct: 135 FTTQREILAGAVSKAKGLQ-MLPEDIRRAHLKGLIHVHDLDRSPFAAMPNCSLPDFDYLL 193 Query: 185 TQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHR 244 + GF +GNA IEPP+SI A + Q++ ++ YGG +I+ ID +L P+ + K+R Sbjct: 194 SHGFTLGNARIEPPRSIGVAATLLVQLLGAISGEQYGGISIHEIDRLLEPYAELTLQKNR 253 Query: 245 K------------TAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT 292 + +A + E A +T K+ +DA Q+ EY+VNTL TA QTPF + Sbjct: 254 RLYSDASGLLCSDSATDAQDDLVEELARRKTAKDIFDAMQAFEYQVNTLTTAAAQTPFTS 313 Query: 293 FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQL 352 G+ TSW R IQ+SIL R G+ +TA+FPK++F + +G+NH GDPNYDIK Sbjct: 314 ISLGMTTSWCGREIQKSILAVRENGMSG--ETAIFPKIIFFVDEGVNHAPGDPNYDIKMA 371 Query: 353 ALECASKRMYPDILNYDQVVKVT-GSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISL 411 A+ C+ +R+YPD+++ ++ ++ G TPMGCRSFL W+N +G+ GRNNLGV+S+ Sbjct: 372 AMRCSMRRIYPDLVSVPRIRELKQGQLITPMGCRSFLHPWKNSDGDYELLGRNNLGVVSI 431 Query: 412 NLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLN 471 NLPRIA+ A+ F+ LDE + L +AL R + API+Y +G G Sbjct: 432 NLPRIAIAAQQSVDDFFTGLDEAIDLGVRALRIREEVVLSADLEQAPIMYTQGGMG-NPA 490 Query: 472 ADDDVSEIF---KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAV 528 V + + + R+SISLGY GIH + AL G EH + RA I+E + V Sbjct: 491 GKTSVRDFYTGDNHKRSSISLGYTGIHNAMVALTGEEHWHTVAGHRALSHRILEHMNTRV 550 Query: 529 DQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPY 588 +++ S+Y+TPSE+LCDRF LD FG +PG+ D+ YY NSFH NP Sbjct: 551 VAVQDQFHATVSVYATPSESLCDRFAELDRDRFGELPGINDRDYYENSFHFPSYLHTNPM 610 Query: 589 DKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECG 648 DKI FEA Y PL GGF+ Y E PN+ N A E +WD ++ HV Y+G N+P+D C CG Sbjct: 611 DKIHFEAQYMPLTPGGFMYYVEAPNLLVNPMAFESIWDEAFDHVGYFGINSPVDHCLVCG 670 Query: 649 FTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 F GEF C +G+TCP C N D ++ SVTRR+CGYLG+P RP +G+Q E+ R+KH+ Sbjct: 671 FEGEFHCDEQGYTCPGCSNRDETQASVTRRLCGYLGAPMKRPVVSGRQAEINSRIKHM 728 >UniRef50_A9KQ95 Anaerobic ribonucleoside-triphosphate reductase n=16 Tax=Bacteria RepID=A9KQ95_CLOPH Length = 708 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 281/720 (39%), Positives = 421/720 (58%), Gaps = 32/720 (4%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCA---TVAAVVSEQMQGRNQVDINEI 61 V+KRDG + +I AI +A EVD + A ++ + ++ + + EI Sbjct: 3 VVKRDGRVTDYDRNKILVAIRKAND--EVDPKEKITEDKIEAIILGIEHLKKDTMYVEEI 60 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 Q +E +LM+ LA+ YI YR R++ R K ++ I L+ +N ++ EN+NK+ Sbjct: 61 QDMIEQKLMAERKFVLAKTYIIYRFRRELVR-KANTTDESIMSLIRHSNEDVMEENSNKN 119 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 + + TQRDL+AG V+K ++ LLP + +AHE G +H+HD DY +FNC LI++K Sbjct: 120 AVIASTQRDLIAGEVSKDLTKRLLLPEKITKAHEEGILHFHDADYF-LQSIFNCCLINIK 178 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 ML G M IE PKS A V QII+ VAS YGG +++ L ++ S + Sbjct: 179 DMLENGTVMNAKLIESPKSFQVACTVMTQIISAVASSQYGGQSVDI--RHLGKYLRHSMD 236 Query: 242 KHRKTAEEWNIPDA-----EGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFG 296 K+RK E +A E + R E Q+++Y++NTL T NGQ+PFVT Sbjct: 237 KYRKRYESLFNGEASEEVIEKFVQERVQDELRSGVQTIQYQINTLMTTNGQSPFVTLFLN 296 Query: 297 LGTS----WESRLIQESILRNRIAGLGKNRK----TAVFPKLVFAIRDGLNHKKGDPNYD 348 L E+ +I E ILR R+ G+ KN K T FPKL++ + + K G +Y Sbjct: 297 LDKDDEYIEENAMIIEEILRQRLEGI-KNEKGVYITPAFPKLIYVLDEHNCLKGGKYDY- 354 Query: 349 IKQLALECASKRMYPDILNYDQVVK-VTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLG 407 I +LA++C++KR+YPD ++ ++ + G+ + MGCRSFL W++ENG+ +GR N G Sbjct: 355 ITKLAVKCSAKRLYPDYISAKKMRENYEGNVFSCMGCRSFLSPWKDENGDYKFEGRFNQG 414 Query: 408 VISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACG 467 V+SLNLP+I + A GDE FW+LL+ERL L +ALM R LEG + V+PI + GA Sbjct: 415 VVSLNLPQIGIIANGDEEIFWQLLEERLALCFEALMCRHRALEGTISDVSPIHWQYGAIA 474 Query: 468 VRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQA 527 RL + + ++ NG ++ISLGYIG++E + G H ++ + I+ RL+ A Sbjct: 475 -RLKKGETIDKLLHNGYSTISLGYIGLYEVTKLMKGVSHT--QKEGTEFALRIMNRLKDA 531 Query: 528 VDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNP 587 D WK+ETG GF LY TP+E+LC RF R+D FG + +TDKGYYTNS+H+DV + ++ Sbjct: 532 ADTWKKETGIGFGLYGTPAESLCYRFARIDKERFGDIKDITDKGYYTNSYHVDVREDIDA 591 Query: 588 YDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYEC 647 + K FE+ + +++GG I Y E PN++HNL+ALE++ + Y ++ Y NT D C+ C Sbjct: 592 FSKFTFESQFQVISSGGAISYIEVPNMRHNLEALEEIVKFIYDNIQYAEFNTKSDYCHVC 651 Query: 648 GFTGEFECTSK-GFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 GF GE + + CP CGN D ++++VTRR CGYLG +N GK +E+ RV H+ Sbjct: 652 GFDGEIKINEDFEWECPNCGNKDHAKMNVTRRTCGYLGE---NFWNKGKTKEINARVLHI 708 >UniRef50_C2BIL8 Possible ribonucleoside-triphosphate reductase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BIL8_9FIRM Length = 706 Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust. Identities = 267/715 (37%), Positives = 418/715 (58%), Gaps = 23/715 (3%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAE-VDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V+KRDG KV F ++I AI +A + + A +A+ + E+ + + ++ I EI+ Sbjct: 3 QVIKRDGTKVDFNKDKITIAIEKAMHSPSGIYVEGQAAEIASEIEERSKNKREISIYEIE 62 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 V +L+ A++Y Y+ + +RE+ + EI GL+ QTN +++EN+NK+ Sbjct: 63 DLVYYKLIDRKNPATAKSYESYKSVQAYKREQNTS-DDEIIGLLNQTNIDVMDENSNKNP 121 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182 + TQRDL+AG VAK A++ L+P D+V+AH+ G IH HDLDY P+FNC L+D+K Sbjct: 122 IIASTQRDLIAGEVAKDIAKRKLIPLDLVEAHDSGAIHIHDLDYL-IQPIFNCCLVDMKD 180 Query: 183 MLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242 ML G + IE PKS A V QIIAQ+AS+ YGG +IN L+P++ S+ K Sbjct: 181 MLDNGTVVNEKMIESPKSFQVACNVMTQIIAQIASNQYGGQSINI--ACLSPYLEKSFEK 238 Query: 243 HRKTAEEWNIPD--AEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 + K A E D A+ A++ T ++ Q+++Y++NTL T+NGQ+PFVT + Sbjct: 239 NLKLASEILKDDDQAKKMADALTQRDLESGIQTIQYQINTLMTSNGQSPFVTLFMHTDEN 298 Query: 301 W----ESRLIQESILRNRIAGLGKNRK---TAVFPKLVFAIRDGLNHKKGDPNYDIKQLA 353 ++ I + IL+ RI G+ ++ T FPKL++ + D N +D+ +LA Sbjct: 299 DPYLDQTVEIIKEILKQRIQGIKNDQGVYVTPAFPKLIYVL-DENNINPDSKYFDLTRLA 357 Query: 354 LECASKRMYPDILNYDQVVK-VTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLN 412 +C +KRMYPD ++ ++ + G+ PMGCR+FL ++++ GE DGR N+GV ++N Sbjct: 358 AKCTAKRMYPDYISAKKMRENYEGNVFAPMGCRAFLPPYKDKYGEYKFDGRFNMGVCTIN 417 Query: 413 LPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNA 472 LP+I + A GDE F+++L++RL L ++ + R L V + +PI + GA RL Sbjct: 418 LPQIGILAHGDEKLFFEILEKRLDLVKRVGILRYDHLAKVTSDSSPIHFQHGAIA-RLKK 476 Query: 473 DDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK 532 + + + +NG A++++GYIGI+E G H ++ + I+E L +W Sbjct: 477 HESIKPLLENGYATVTIGYIGIYEATKLTIGESHT--TKRGHDFAMKIMEMLNDKKKEWS 534 Query: 533 EETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKID 592 EE G F++Y TP+E+L RF +D FG + VTDKGYYTNSFH+DV + ++ +DK D Sbjct: 535 EEYGIAFAVYGTPAESLTHRFASIDRERFGDIKDVTDKGYYTNSFHVDVRENISVFDKFD 594 Query: 593 FEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGE 652 FE+ + L+ GG I Y E PN+ +N++A+ + +Y Y H+ Y NT D C CG+ GE Sbjct: 595 FESEFQKLSTGGCISYAEIPNMTNNIEAVLTMIEYIYDHIQYAEFNTKSDYCGNCGYDGE 654 Query: 653 FECTSKG-FTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 + CP CGNHD + ++V RR CGYLG +N G+ +E+K RV H+ Sbjct: 655 ILLDDNNQWYCPNCGNHDRATLTVVRRTCGYLGE---NFWNEGRTKEIKARVLHI 706 >UniRef50_C4ZF10 Anaerobic ribonucleoside-triphosphate reductase n=29 Tax=Bacteria RepID=C4ZF10_EUBR3 Length = 746 Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust. Identities = 280/745 (37%), Positives = 405/745 (54%), Gaps = 55/745 (7%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAA---EVDDADYCATVAAVVSEQMQG-RNQVDINE 60 ++KR G + F + +I AI +A + E AD +A+ V + + + E Sbjct: 14 IIKRSGSEDIFDAAKIVAAIRKANDSVLDYEKLTADQIEEIASNVETACENMKRSPSVEE 73 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQ VENQLM+ +AR YI YR+ R I R K +Q+I L+E N + EN+NK Sbjct: 74 IQDMVENQLMNKRAFTVARNYITYRYKRAIVR-KSNSTDQQILSLLECNNEEVKQENSNK 132 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 + V QRD +AG V+K R+ LLP D+V+AHE+G IH+HD DY M NC L++L Sbjct: 133 NPTVNSVQRDYMAGEVSKDITRRFLLPEDIVEAHEKGLIHFHDADYFAQH-MHNCCLVNL 191 Query: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY 240 + ML G + I+ PKS STA + Q IAQ+AS YGG +I+ LAPFV S Sbjct: 192 EDMLQNGTVISETMIDTPKSFSTACNIATQAIAQIASSQYGGQSISLAH--LAPFVQVSR 249 Query: 241 NKHRKTAE--------EWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT 292 K RK + + + A R +E Q ++Y+V TL T NGQ PF+T Sbjct: 250 EKFRKQVQKEFESVGLDLDEEKINEVAELRVKEEINRGVQMIQYQVITLMTTNGQAPFIT 309 Query: 293 FGFGLG------TSWESRLIQESILRNRIAGLGKNRK----TAVFPKLVFAIRDGLNHKK 342 L T + I E +L RI G+ KN K T FPKL++ + D N + Sbjct: 310 VFMYLNEVSDPQTKADLAAIIEEMLHQRIKGV-KNEKGVYITPAFPKLIYVLEDD-NITE 367 Query: 343 GDPNYDIKQLALECASKRMYPDILNYDQVVKVT--GSFKTPMGCRSFL----------GV 390 +++ LA +C++KRM PD ++ ++V+K G T MGCRSFL V Sbjct: 368 DSKYWNLTVLAAQCSAKRMVPDYIS-EKVMKELKDGDVYTCMGCRSFLTVDRCSQTAGNV 426 Query: 391 WENEN---GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 EN ++ + GR N GV++LNL +A ++ DE FWK+LDERL L +ALM R Sbjct: 427 AHAENFDPNKRKYYGRFNQGVVTLNLVDVACSSEKDEEKFWKILDERLELCHRALMCRHK 486 Query: 448 RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHV 507 RL G K+ VAPIL+ GA RL + + + NG ++ISLGY G+ E + + G H Sbjct: 487 RLLGTKSDVAPILWQNGALA-RLKKGEVIDPLLFNGYSTISLGYAGLCECVRYMKGVSHT 545 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGV 567 E + +++RL A +QWK+E+ FS+Y TP E+ +F + FG++ GV Sbjct: 546 EPKEGT-PFALKVMQRLNDACEQWKKESNIDFSIYGTPLESTTYKFAKCLQKRFGIIKGV 604 Query: 568 TDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDY 627 TDK Y TNS+H+ V +++N +DK+ FE+ + L+ GG I Y E PN+Q N+ A+ V Y Sbjct: 605 TDKNYITNSYHVHVTEQINAFDKLKFESQFQKLSPGGAISYVEVPNMQDNIPAVLSVMQY 664 Query: 628 SYQHVPYYGTNTPIDECYECGFTGEFECTSKG------FTCPKCGNHDASRVSVTRRVCG 681 Y ++ Y NT D C CG+ GE + + + CP CGN D +++SV RR CG Sbjct: 665 IYDNIMYAELNTKSDYCQVCGYDGEIKIVEEEGSGKLIWECPHCGNRDQNKMSVARRTCG 724 Query: 682 YLGSPDARPFNAGKQEEVKRRVKHL 706 Y+G+ + +N G+ +E+K RV HL Sbjct: 725 YIGT---QFWNQGRTQEIKERVLHL 746 >UniRef50_D0WIV3 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Bacteria RepID=D0WIV3_9ACTN Length = 740 Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust. Identities = 265/750 (35%), Positives = 399/750 (53%), Gaps = 60/750 (8%) Query: 5 VMKRDGCKVPFKSERIKEAILRA----AKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 ++KR+G +V F +I+ AI A A + D V + + V + E Sbjct: 3 IIKRNGSEVEFDISKIENAITAANAEVPAAQRLTDRQISYASQNVADACAEAGHAVSVEE 62 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQ VE+++M ++AR YI YR+ + ++R+K + +I L+E N + EN+NK Sbjct: 63 IQDLVEDEIMKLDRFEVARKYIIYRYVQGLKRQK-NTTDDKIMALIECNNEEVKQENSNK 121 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 + V QRD +AG V+K A + LLP+DVV AH G IH+HD DY M NC L++L Sbjct: 122 NPSVNSVQRDYMAGEVSKDLAMRVLLPKDVVTAHNEGVIHFHDSDYYAQH-MHNCDLVNL 180 Query: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY 240 + ML G + IE P S STA + QIIAQVAS YGG +I+ LAPFV S Sbjct: 181 EDMLQNGTVISGTLIEKPHSFSTACNIATQIIAQVASSQYGGQSISLTH--LAPFVDVSR 238 Query: 241 NK-HRKTAEEWNIPDAEG-------YANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT 292 + R+ +E N E R E Q+++Y+V TL T NGQ PFVT Sbjct: 239 QRIRREVLDEINTLGFESSPERVSEVVEKRLRDEIRRGVQTIQYQVVTLMTTNGQAPFVT 298 Query: 293 FGFGLGTSWESR------LIQESILRNRIAGLGKNRK----TAVFPKLVFAIRDGLNHKK 342 L + + +I E L R G+ KN + T FPKL++ + + N + Sbjct: 299 VFMYLNEAKDEAEKHDLAMIIEETLAQRYQGV-KNEEGIWITPAFPKLIYVLEED-NVSE 356 Query: 343 GDPNYDIKQLALECASKRMYPDILNYDQV---------VKVTGSFKTPMGCRSFL----- 388 G P + + Q+A +C ++R+ PD ++ ++ V+ G T MGCRSFL Sbjct: 357 GSPYFYLTQMAAKCTARRLVPDYISEKKMRELKLSKGEVEGDGDCYTCMGCRSFLTPDRS 416 Query: 389 -GVWEN-------ENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARK 440 ++N E G + GR N GV+++NLP +AL ++GD FW + +ERL L + Sbjct: 417 GNGYDNVANAGNYEPGTPKYYGRFNQGVVTINLPDVALSSRGDVDAFWDIFEERLELCHR 476 Query: 441 ALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINA 500 AL R RL G + APIL+ GA RL + + ++ G +++SLGY G++E + Sbjct: 477 ALRARHDRLRGTLSDAAPILWQHGALA-RLEKGETIDKLLYGGYSTLSLGYAGLYECVKY 535 Query: 501 LFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAE 560 L G H + +E+ A+++++ +WKE +SLY TP E+ +F + Sbjct: 536 LTG--HSHTDEEATPFAKAVMQKMNDKCAEWKEAEDIDYSLYGTPLESTTYKFAKALQRR 593 Query: 561 FGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKA 620 FGV+ G+TDKGY TNS+H+ V ++++ + K+ FE+ + L+ GG I Y E PN+Q NLKA Sbjct: 594 FGVIKGITDKGYITNSYHVHVAEEIDAFTKLKFESEFQRLSPGGAISYIEVPNMQDNLKA 653 Query: 621 LEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKG----FTCPKCGNHDASRVSVT 676 + V Y Y+++ Y NT D C CG+ GE + G + CP CGN D S ++V Sbjct: 654 VVSVIQYIYENIMYAELNTKSDYCQCCGYDGEIKIVEDGGKLVWECPNCGNRDQSTMNVA 713 Query: 677 RRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 RR CGY+G+ + +N G+ +E+K RV HL Sbjct: 714 RRTCGYIGT---QYWNQGRTQEIKDRVLHL 740 >UniRef50_C7MM33 Anaerobic ribonucleoside-triphosphate reductase n=17 Tax=Bacteria RepID=C7MM33_CRYCD Length = 740 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 265/752 (35%), Positives = 398/752 (52%), Gaps = 64/752 (8%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAA----EVDDADYCATVAAVVSEQMQGRNQVDINE 60 V+KR+G +V F +I AI +A + + A V +E + + E Sbjct: 3 VIKRNGSEVIFDVTKIVNAIAKANEEVVPENRLSQAQILTAANNVTTECEACGHAPAVEE 62 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGR--LNQEIRGLVEQTNASLLNENA 118 IQ VE+Q+M+ ++AR YI YR+ ++ +KR + +I L+E N + EN+ Sbjct: 63 IQDMVEDQIMALGCFEVARKYIIYRY---LQNQKRASNTTDDKILSLIECNNEEVKQENS 119 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 NK+ V+ QRD +AG V+K A + LLP+DVV AHE G IH+HD DY M NC L+ Sbjct: 120 NKNPAVVSVQRDYMAGEVSKDLASRMLLPQDVVWAHENGLIHFHDSDYYAQ-RMHNCDLV 178 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 +L+ ML G + IE P S STA + QIIAQVAS YGG +I+ LAPFV Sbjct: 179 NLEDMLQNGTVISGTLIEKPHSFSTACNIATQIIAQVASCQYGGQSISLAH--LAPFVDI 236 Query: 239 SYNKHRKTA-EEWNIPDAEGYAN-------SRTIKECYDAFQSLEYEVNTLHTANGQTPF 290 S K R+ E N E + +R E Q+++Y+V TL T NGQ PF Sbjct: 237 SRQKIRRAVIAELNDLGLEATGDRLDTVVEARVRDEIRRGVQTIQYQVVTLMTTNGQAPF 296 Query: 291 VTFGFGLGTSWESR------LIQESILRNRIAGLGKNRK----TAVFPKLVFAIRDGLNH 340 +T L + + + E +LR R G+ KN T FPKL++ + D N Sbjct: 297 ITVFMYLNEARNEQEKHDLAMCIEEMLRQRHQGV-KNEAGVWITPAFPKLIYVLEDD-NI 354 Query: 341 KKGDPNYDIKQLALECASKRMYPDILNYDQVVKV---------TGSFKTPMGCRSFLGVW 391 + P Y + Q+A +C ++R+ PD ++ ++ + G T MGCRSFL Sbjct: 355 EADSPYYYLTQMAAKCTARRLVPDYISEKKMKEYKLSAGEEAGNGDCYTCMGCRSFLTPD 414 Query: 392 ENENG-------------EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLA 438 + NG + + GR N GV+++NL +AL ++GD FW++ DERL L Sbjct: 415 RSGNGYNNVANVANWDPTKPKYYGRFNQGVVTINLVDVALSSEGDINKFWEVFDERLELC 474 Query: 439 RKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETI 498 KAL+ R RL+G + APIL+ GA RL + + ++ G ++ISLGY G++E Sbjct: 475 HKALLCRHNRLKGTLSDAAPILWQYGALA-RLEKGETIDKLLYGGYSTISLGYAGLYECT 533 Query: 499 NALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDT 558 + G H N + + +++ + + WKEE FSLY TP E+ +F + Sbjct: 534 KYMTGKSHT--NPEATPFALEVMQHMNDKCNTWKEEHDIDFSLYGTPLESTTYKFSKCLQ 591 Query: 559 AEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNL 618 FG++ G+TDKGY TNS+H+ V ++++ ++K+ FE+ + PL+ GG I Y E P++Q NL Sbjct: 592 RRFGIIEGITDKGYITNSYHVHVAEEIDAFNKLKFESQFQPLSPGGAISYVEVPDMQDNL 651 Query: 619 KALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKG----FTCPKCGNHDASRVS 674 +A+ V Y Y ++ Y NT D C CGF GE + CP CGN D ++++ Sbjct: 652 EAVMKVLHYIYDNIMYAELNTKSDYCQVCGFDGEITIIEDDGKLVWECPHCGNRDQTKLN 711 Query: 675 VTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 V RR CGY+G+ + +N G+ +E+K RV HL Sbjct: 712 VARRTCGYIGT---QFWNQGRTQEIKDRVLHL 740 >UniRef50_C6JR80 Ribonucleoside-triphosphate reductase n=2 Tax=Fusobacterium RepID=C6JR80_FUSVA Length = 748 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 242/749 (32%), Positives = 379/749 (50%), Gaps = 54/749 (7%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+KR+G V F E+I++ + + K + D + + +++ G ++ + IQ Sbjct: 6 VIKRNGSIVTFNKEKIEKVLEKIDKEVKFIDKVSIEHMMNDIVKKINGNTRMSVEAIQDI 65 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKV 124 V L + + A+A+ YR R +R N R + + + EN+NK+S + Sbjct: 66 VFYTLCTNGLFEQAKAFQTYRTQRAEQRLMEA--NTVFRHMTDIVDVGD-RENSNKNSML 122 Query: 125 IPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGML 184 QRDL+AG + Y + + +++ AH + IH+HD D + NC L +++ ML Sbjct: 123 PSVQRDLIAGEYFR-YILEKNIDKELWAAHRKKTIHWHDSDVDT--KLTNCCLFNIEDML 179 Query: 185 TQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKH- 243 G ++ NA++ P S+ TA + QI+A +++ YGG ++ +EV A + ++ K+ Sbjct: 180 RNGTRITNADVCQPNSVGTAMNIAMQIMASISASQYGGVSLPNFNEVFAEYAKKNFKKNF 239 Query: 244 -----RKTAEEWNI--------------------------PDAEGYANSRTIKECYDAFQ 272 K + E NI P A RT K+ YDA Q Sbjct: 240 MRAYNDKLSTESNISRVTEEDIEKELGEISSGNEKLASEKPVEFQIAKERTAKDIYDACQ 299 Query: 273 SLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVF 332 EY+ N++ + QTPF T F + TSWES I S L+ R GLG+ A+FPKL + Sbjct: 300 LFEYQTNSILGSASQTPFSTITFNIPTSWESEHIILSYLKVRQTGLGEKHIPAIFPKLSY 359 Query: 333 AIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE 392 + DG N KKGD + I + +C + YPDIL Y + G + MGCRS + Sbjct: 360 MVVDGYNFKKGDKYFYITEEVAKCIANTYYPDILFYSKEDYDAGKYYARMGCRSRVNHEY 419 Query: 393 NENGEQIHDGRNNLGVISLNLPRIALEAKGDE----------ATFWKLLDERLVLARKAL 442 NGE H GR N GV +LN+P+IAL+ DE F +L++R L +KA+ Sbjct: 420 QVNGEYQHYGRFNYGVATLNVPQIALDVLKDERYGGAEGNRLERFLDILEKRKELMKKAI 479 Query: 443 MTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALF 502 TR + ++A+ APIL+ G RL DD V E+ K RAS+S G++G+ + + L Sbjct: 480 QTRFENVRHLQAKKAPILFQYGGIA-RLEPDDTVEELLKTDRASVSYGFLGLDDAVRILS 538 Query: 503 GGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG 562 + E+ GIAI++ +R+ D K ETG S+Y TP+E+ F D +G Sbjct: 539 DDKENISTEKGHEMGIAIMKAIRKQADDIKVETGLPVSVYGTPAESSIATFFNKDVENYG 598 Query: 563 -VVP-GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKA 620 ++P + ++ YYTNSFH E ++ +DKID EAP+ NGG I Y E +N +A Sbjct: 599 EIMPEWLREREYYTNSFHFSSELPIDSFDKIDVEAPFIKYCNGGNIMYVENGGKTYNSQA 658 Query: 621 LEDVWDYSYQH-VPYYGTNTPIDECYECGFTGEFECTSK--GFTCPKCGNHDASRVSVTR 677 + ++ Y++ + Y+ NT D CYECG+TGE K + CP CGN D ++ + R Sbjct: 659 IIELIQYAHDAGIEYFAVNTISDVCYECGYTGEISYNEKTASYKCPHCGNEDGMKMKIQR 718 Query: 678 RVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 R CGY+ + + G+ +E+K R H+ Sbjct: 719 RCCGYISNYNITHALEGRMKEIKNRAIHV 747 >UniRef50_A4J2C9 Ribonucleoside-triphosphate reductase class III catalytic subunit n=7 Tax=Bacteria RepID=A4J2C9_DESRM Length = 676 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 245/718 (34%), Positives = 377/718 (52%), Gaps = 58/718 (8%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDD----ADYCATVAAVVSEQMQGRNQV 56 M V KRDG +V F +I EAI RAAKA +D + V ++ +Q G N Sbjct: 1 MFTKVRKRDGREVAFNETKITEAIFRAAKAVGGEDRQTAMELTLDVLKMLKKQYNG-NLF 59 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNE 116 + E+Q VE L+ + + A+AYI YR R R+ R L + ++ +T+ E Sbjct: 60 GVEEVQDMVEKVLIESGHARTAKAYILYRAQRTRLRDARSDLMDAVEEILGETS----RE 115 Query: 117 NANKDSKVIPTQRDL-LAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 NAN + P+ + L +A +K Y L+P ++ QAH RGD+H HDLD+ + C Sbjct: 116 NANVSNS--PSAKMLQIASAASKKYYLTRLIPEEMSQAHARGDLHIHDLDF--YGKTLTC 171 Query: 176 MLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 + I L +L +GF G+ I PK ++ATA+ A I+ + ++GG + D +APF Sbjct: 172 IQIPLGRLLKEGFNTGHGYIRAPKRPTSATALAAIILQSSQNDMHGGQSFAFFDRDIAPF 231 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHT-ANGQTPFVTFG 294 V +EE E Y A ++L Y +N++H+ A Q PF + Sbjct: 232 V-------ENASEE----------------ETYQAMEALIYNLNSMHSRAGAQVPFSSLN 268 Query: 295 FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLAL 354 G TS +R++ +++L AGLG+ + +FP ++F +++G+N GDPNYD+ QLA+ Sbjct: 269 LGTETSEAARMVIKNLLLAYEAGLGRG-ENPIFPNIIFKLKEGINLNPGDPNYDLFQLAI 327 Query: 355 ECASKRMYPDILNYDQVV-KVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNL 413 +SKR+ P D K G MGCR+ V N G + DGR NL ++NL Sbjct: 328 RVSSKRLNPTFSFMDSSFNKEYGDQVGYMGCRT--RVMANRKGPAVTDGRGNLSFTTINL 385 Query: 414 PRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGA-CGVR-LN 471 PRIA++A+ + F++LLDE L ++ + L R +K + P + +G G + LN Sbjct: 386 PRIAIKAERNIDKFYRLLDETLDMSFRQLYHRFTVQAKLKVKDMPFVMGQGLYLGSQGLN 445 Query: 472 ADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQW 531 +D + E+ K+G ++S G+IG+ E + AL G+H +E+ + G+ IV +RQ +D+ Sbjct: 446 PNDTLEEVIKHG--TLSPGFIGLAEALVAL-NGQHHGQSEETQKLGLEIVSYMRQKIDEA 502 Query: 532 KEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKI 591 E+ ++L +TP+E++ RF +LD EFG++PGVTDK YYTNSFH+ V + ++KI Sbjct: 503 SEKYDLNYTLLATPAESVSGRFAKLDRKEFGIIPGVTDKEYYTNSFHIPVGYPIGIFEKI 562 Query: 592 DFEAPYPPLANGGFICYGEYPNIQ-HNLKALEDVWDY-SYQHVPYYGTNTPIDECYECGF 649 E PY N G I Y E + HN +A+E + + + Y N P+D C C Sbjct: 563 SLEGPYHKYCNAGHISYVEMASPPLHNPQAVEAIIKHMQASDMGYAAINFPVDYCTSCSV 622 Query: 650 TGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLG 707 TG S CP+C + + RV RR+ GYL + D FN K E+ R H G Sbjct: 623 TGVINQDS----CPRCESPEIRRV---RRITGYLSTVDR--FNDAKVAELNDRTTHSG 671 >UniRef50_B2A3V1 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Clostridia RepID=B2A3V1_NATTJ Length = 736 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 241/732 (32%), Positives = 372/732 (50%), Gaps = 46/732 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDI 58 M V+KRDG + PF +I AI +A KA + +D ++ V ++ G ++ + Sbjct: 15 MPTKVVKRDGREQPFDPSKITNAIKKALKAIDKEDHSLALSLTYQVINKLTKHGVDKPTV 74 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 +IQ VEN LM + ++ARAY+ YR+DRD RE +L +E+ ++E + N N Sbjct: 75 PQIQEMVENSLMDTGHYEVARAYVIYRNDRDRIREADTKLMKELLKVLETRDQE--NANV 132 Query: 119 NKDSKVIPTQRDLLAGIVA-KHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 N D+ P + L G A K H + QAH G IH HD D++ C+ Sbjct: 133 NGDA---PMGKMLKGGSEAMKEVYLNHFAKNEHSQAHRNGYIHIHDADFAAIGTT-TCLQ 188 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 I L +L +GF G+ I PKSI +A +++ + + +GG + D LAP+V Sbjct: 189 IPLDRLLAEGFNTGHGWITTPKSIESAASLSCIVFQSNQNDQHGGQSFATFDSSLAPYVK 248 Query: 238 ASYNKHRKTAEEWNIPD-AEGYANSRTIKECYDAFQSLEYEVNTLHT-ANGQTPFVTFGF 295 +++K + + I + + A + K Y A Q + +NT+H+ A Q PF + F Sbjct: 249 ITFDKIKNELSQLGISENIDDKAWEQVKKRTYQAMQIFVFNLNTMHSRAGAQVPFTSVNF 308 Query: 296 GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALE 355 GL TS RLI E +L+ GLG+ +T +FP L+F++ G+N + GDPNYD+++LA E Sbjct: 309 GLDTSPWGRLISEMLLKVYKKGLGRG-ETPIFPNLIFSLATGVNKEPGDPNYDLRRLAHE 367 Query: 356 CASKRMYPDILNYDQVVKVTGSFKTP-------MGCRSFLGVWENENGEQIHDGRNNLGV 408 + +R++P+ N D ++ MGCR+ V N G ++ +GR NL Sbjct: 368 VSCERLFPNYSNQDASYNAPFYYREEDPQVVAYMGCRT--RVISNRRGPEVTEGRGNLSF 425 Query: 409 ISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC-- 466 S+NLPRIALE + F++ L++ + L L R + KA+ P L +G Sbjct: 426 TSINLPRIALETSC-PSDFYQRLEDTIWLVADQLYDRFKIQKNKKAKEFPFLMGQGLYMD 484 Query: 467 GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQ 526 +++ + E K+G ++S+G+IG+ E + A+ G EH ++E+ KG+ IVE + Sbjct: 485 SEDFESEETLEEALKHG--TLSIGFIGLAEALKAMIG-EHHGESEEAFKKGLQIVEFMDN 541 Query: 527 AVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVN 586 + E+ FSL +TP+E L RF LD FG + GVTDK +YTNSFH+ VE ++ Sbjct: 542 ICKKASEQYNLNFSLLATPAEGLSGRFTELDRETFGEIEGVTDKEWYTNSFHIPVEYSIS 601 Query: 587 PYDKIDFEAPYPPLANGGFICYGEYPNI-QHNLKALEDVWDYSYQH-VPYYGTNTPIDEC 644 Y+KI E+ + G I Y E + N+ A E + + + + Y+ N P+D+C Sbjct: 602 AYEKIRKESAFNKYTPAGHINYVELDAAPKGNIDAFEQLVNAAMDNDCGYFSVNFPVDQC 661 Query: 645 YECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARP----------FNAG 694 C G + TCP CG+ RV RRV GYLG + P FN G Sbjct: 662 LNCANNGVIDSE----TCPVCGSRRIQRV---RRVTGYLGVLEEIPDEEGEGKTSGFNDG 714 Query: 695 KQEEVKRRVKHL 706 K E RV HL Sbjct: 715 KYHECLNRVSHL 726 >UniRef50_A5HXZ1 Anaerobic ribonucleoside-triphosphate reductase n=36 Tax=Clostridium RepID=A5HXZ1_CLOBH Length = 713 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 230/728 (31%), Positives = 366/728 (50%), Gaps = 53/728 (7%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAK--AAEVDDADYCATVAAVVSE-QMQGRNQVDINE 60 +V+KRDG KV F +I AI AA+ A ++ +++ + V+ + + + ++ + + Sbjct: 3 YVVKRDGRKVEFDVVKISNAIKGAAEEIAFDMKESENISLTQKVIKKIEDSNKEEISVED 62 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQ VE+ L+ +K++ AY YR +R RE + L I + +T+ N N Sbjct: 63 IQNLVEHVLIDSGFKEIGYAYSNYRRERTKIREIKSELMTAIEKIGVETDRDNANVGNNF 122 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 SK++ + + + ++P+ + + HE GDI+YHDLD + NC+ ID Sbjct: 123 SSKLLRIASE------SNKWYNLGVMPKHLAKLHENGDIYYHDLD--SYNLTVNCLNIDT 174 Query: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY 240 +L +GF G I PK I +A ++ ++ + ++GG D +A F+ + Sbjct: 175 GRILQRGFNTGYGTINAPKRIESAAELSCILLQSTQNDMFGGQAHVNFDNDMALFIPNTR 234 Query: 241 NKHRKTAEE--WNIPDAEGYANSRTIKEC---------YDAFQSLEYEVNTLHT-ANGQT 288 ++ RK E + E N I E + A Q + Y +NT+H+ A Q Sbjct: 235 SEIRKEILENLKGLEVQEEVLNKEKIDELVEERLRLRIHQAMQGIVYNLNTMHSRAGSQV 294 Query: 289 PFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYD 348 PF + G+ ++ LI E L+ GLGK + +FP ++F +++G+N ++ DP Y Sbjct: 295 PFSSINIGIPKDKDAALICEIFLKEYEKGLGKGEQ-PIFPNIIFRVKEGVNREEKDPYYY 353 Query: 349 IKQLALECASKRMYPDILNYDQVVKV----TGSFKTPMGCRSFLGVWENENGEQIHDGRN 404 + +LA + A KRM P +N D G MGCR++ V N +GE+ GR Sbjct: 354 LFKLAAKIAGKRMNPTFMNMDSDFNKEYYDKGIIPATMGCRTY--VCSNISGEEGPAGRG 411 Query: 405 NLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEG 464 N+ ++NLPR+ + AK D F+ LLD RL LAR++L+ R L+ ++ + P + EG Sbjct: 412 NIAPTTINLPRVGILAKKDINKFFNLLDNRLELARESLLHRYNVLKKLRVKDLPFVVGEG 471 Query: 465 AC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVE 522 L DD + I K G S ++G+IGI ET+ AL G H + E+ + G+ IV Sbjct: 472 LMKGSENLLPDDSIEPILKQG--SWAIGFIGIAETLTALIGSHHG-ETEEAKELGVKIVS 528 Query: 523 RLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVE 582 +R D++KE +S Y+TP+E L +F D FG + GVTDK YYTNS+H+ V Sbjct: 529 HIRDFCDKYKEIDKLNWSCYATPAEGLSGKFILQDKKVFGEIKGVTDKNYYTNSYHIPVG 588 Query: 583 KKVNPYDKIDFEAPYPPLANGGFICYGE---YPNIQHNLKALEDVWDYSYQ--HVPYYGT 637 ++ +KI+ EAPY + NGG I Y E YP+ + + D+ Y+Y+ ++ Y G Sbjct: 589 FPISIKEKINIEAPYHKICNGGHISYIELDDYPSEE----VIMDIIQYAYRNTNISYMGI 644 Query: 638 NTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQE 697 N I C ECG T G C N ++ + RV GYL S D R F +GK Sbjct: 645 NFHIKYCRECG-------TYLGVEEEACNNCGSTNIQGISRVTGYL-SLDER-FGSGKVA 695 Query: 698 EVKRRVKH 705 E R + Sbjct: 696 ERADRTSN 703 >UniRef50_C6IYT0 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Bacillales RepID=C6IYT0_9BACL Length = 658 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 212/662 (32%), Positives = 328/662 (49%), Gaps = 60/662 (9%) Query: 88 RDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLP 147 RD ++ R+ +EI V+ N +L ENAN + + + +K YA +LP Sbjct: 11 RDTLLDEVIRMGEEI---VQSRNLEVLRENANLNGESFSGKMSKFGSEYSKWYASHFVLP 67 Query: 148 RDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAV 207 +VQA + ++ HDLD NC+ I +L +GF GN + PP SI TA A+ Sbjct: 68 TRLVQAIQDNIVYVHDLDQYALGTT-NCIFIPFDKLLRKGFNTGNGSVRPPTSIMTAMAL 126 Query: 208 TAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEW----------------- 250 A I + +GG + N++D L P+V S+ K+ + ++ Sbjct: 127 VAIIFQSQQNSQFGGVSANKLDFDLVPYVAKSFAKYFRKGLDYFEEGDANADLGDITMSR 186 Query: 251 -----NIPDAEGYANSRTIKECYDAFQSLEYEVNTLHT-ANGQTPFVTFGFGLGTSWESR 304 P A YA T E + A +SL + +NT+ + A GQ PF + +G TS E + Sbjct: 187 SDLRDQYPKAFNYALKETKSETFQAAESLIHNLNTMSSRAGGQIPFTSINYGTCTSPEGQ 246 Query: 305 LIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPD 364 L+ +S+L + GLG +T +FP +F + G+N G+PNY + A EC++KR+YP+ Sbjct: 247 LVIDSLLTATMRGLGHG-ETPIFPIQIFKCKQGVNQNPGEPNYSLFLKAAECSAKRLYPN 305 Query: 365 ILNYDQVVKVT--------GSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRI 416 N D + + F T MGCR+ V + G G+ NL +LNL ++ Sbjct: 306 FANLDAPLNLMYYDPTDPDTEFAT-MGCRT--RVLADRFGRNRLSGKGNLSFNTLNLVKL 362 Query: 417 ALE--------AKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC-- 466 L+ + DE F++ L + +A + L+ R + KA+ + + EG Sbjct: 363 GLKYGIALGHRKEPDERGFYRELTHYMNIALEGLLHRFSIQASQKAKASDFMMREGVWEG 422 Query: 467 GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQ 526 G +L DD V E+ K+G S+S+G+IG+ E + A++G H D E + K ++ +R Sbjct: 423 GEQLAPDDQVGELLKHG--SLSIGFIGLAECMKAMYGKHHGED-EAVYQKAYDLIAYMRD 479 Query: 527 AVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVN 586 D E +L++TP+E L +F + D A +G +PG+ D+ YYTNSFH+ V ++ Sbjct: 480 YCDGQSEIHNLNITLFATPAEGLSGKFTKRDRAVYGPLPGILDREYYTNSFHIPVYYNIS 539 Query: 587 PYDKIDFEAPYPPLANGGFICYGEY-PNIQHNLKALEDVWDYSY-QHVPYYGTNTPIDEC 644 KI+ EA + L N G I Y E N ++N +A + Y+ Q V Y+ N PID C Sbjct: 540 AARKIELEAKFHGLCNAGAISYIELNGNARNNPEAFVKIVQYALQQQVSYFSINHPIDRC 599 Query: 645 YECGFTGEFECTSKGFTCPKCGNHDAS-RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRV 703 CGF G G +CP CG+H++ + RRV GYL FN KQ EV+ RV Sbjct: 600 SACGFEGII-----GASCPSCGSHESEVHIRRLRRVTGYLTGDYQTRFNPAKQAEVRDRV 654 Query: 704 KH 705 KH Sbjct: 655 KH 656 >UniRef50_A6L0X1 Anaerobic ribonucleoside-triphosphate reductase n=24 Tax=Bacteria RepID=A6L0X1_BACV8 Length = 758 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 228/769 (29%), Positives = 370/769 (48%), Gaps = 87/769 (11%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDAD--YCATVAAVVSEQMQGRNQVDINEIQ 62 ++KRDG + F +IK AI +A A+ +D+ D V+S + + + EIQ Sbjct: 8 IIKRDGKREDFSISKIKNAIGKAFHASGIDNEDKLIAEITMRVISNFVSP--TISVEEIQ 65 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 VE +LM ++A+ YI YR R+ ER+++ ++ + G+V + NAN S Sbjct: 66 DLVEKELMK-VRPEVAKKYIIYREWRNTERDRKTQMKHIMDGIVAIDKNDVNLSNANMSS 124 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182 Q A V K Y ++LLP+ +AH+ GDIH HDLDY P C+ DL Sbjct: 125 HTPAGQMMTFASEVTKDYTYKYLLPKKYAEAHQLGDIHIHDLDYYPT-KTTTCIQYDLDD 183 Query: 183 MLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242 + +GF+ N I P+SI + + I + +GG I D +A V ++ K Sbjct: 184 LFERGFRTKNGSIRTPQSIQSYATLATIIFQTNQNEQHGGQAIPAFDFFMAEGVRKTFRK 243 Query: 243 HRKTAEEWNI------PDAEGY------ANSRTIKECYDAFQSLEYEVNTLHTANG-QTP 289 H KT E+ I P E A + T K+ + A + + +NT+H+ G Q Sbjct: 244 HLKTLTEFYIEVEGKEPGTEALKKIEEKAYAMTRKDTHQAMEGFIHNLNTMHSRGGNQVV 303 Query: 290 FVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD----- 344 F + +G TS E R++ E +L+ I GLG + VFP +F ++DG+++ + D Sbjct: 304 FSSINYGTDTSPEGRMVIEELLKATIEGLGTRGEVPVFPIQIFKVKDGVSYSEEDYKKAM 363 Query: 345 ---------------PNYDIKQLALECASKRMYPDILNYDQVVKVTGSF--KTP------ 381 PN+D+ A +K ++P+ + D + K P Sbjct: 364 ENFEAALEGKMEFQAPNFDLFLKACRTTAKALFPNFMFLDTPYNKNEKWDIKDPKRYRYE 423 Query: 382 ---MGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLA 438 MGCR+ V+EN GE+ GR NL ++N+PR+A+EA+ +A + ++ + Sbjct: 424 LATMGCRT--RVYENIAGEKSSLGRGNLSFTTMNMPRLAIEAR-IKAESLEESGKKEAIE 480 Query: 439 RKALMTRIARLEGVKARVAPILY----------------MEG----ACGVRLNADDDVSE 478 RKA I + + +A LY M G G +L+ +D V + Sbjct: 481 RKAKEIFIESVHALSELIAEQLYARYQYQRTALARQFPFMMGNDVWKGGGKLSPNDQVGD 540 Query: 479 IFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYG 538 + + G ++ +G+IG H + AL+G H + + A+ E + + D++K++ Sbjct: 541 VLRQG--TLGIGFIGGHNAMMALYGEGHAHSQKAWDTLFEAVTE-MNKVADEYKQKYQLN 597 Query: 539 FSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYP 598 FS+ +TP+E L RF R+D ++G++PGVTD YY NSFH+DV++ + +KI EAP+ Sbjct: 598 FSVLATPAEGLSGRFTRMDRRKYGIIPGVTDNDYYVNSFHVDVKEPITITEKIKREAPFH 657 Query: 599 PLANGGFICYGEYP-NIQHNLKALEDVWDYSYQHVPYYGT-NTPIDECYECGFTGEFECT 656 + GG I Y E Q N+KA+ + + YG+ N P+D C CG+ G Sbjct: 658 AITRGGHITYVELDGEAQKNVKAIAKIVKVMHDEGIGYGSINHPVDTCQACGYKGVIYD- 716 Query: 657 SKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 CP C + + R+ RR+ GYL + D +N+ K+ E + RVKH Sbjct: 717 ----KCPVCQSENIMRM---RRITGYL-TGDLSTWNSAKRAEERDRVKH 757 >UniRef50_Q733N6 Anaerobic ribonucleoside-triphosphate reductase, putative n=91 Tax=Bacteria RepID=Q733N6_BACC1 Length = 619 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 203/614 (33%), Positives = 313/614 (50%), Gaps = 27/614 (4%) Query: 105 LVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDL 164 +V L+ ENAN D + A AK+YA ++LL V +A ++ HDL Sbjct: 19 IVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVENLLSDQVKKAINENILYPHDL 78 Query: 165 DYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTT 224 D+ C I L ML GF G+ + P+ I +A A+++ I + +GG + Sbjct: 79 DFYATGTT-TCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALSSIIFQANQNMQHGGQS 137 Query: 225 INRIDEVLAPFVTASYNKHRKTAEEWNIP--DAEGYANSRTIKECYDAFQSLEYEVNTLH 282 D LAP+V + +H+K + + + E +A T + Y A ++ + N++H Sbjct: 138 FALFDVDLAPYVRKTVERHKKRLQSYPLTKEQIEEFAWKETENDTYQACEAFIHNSNSMH 197 Query: 283 T-ANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK 341 + GQ PF++ +G TS E RL+ + +L+ AGLGK +T +FP +F ++ G+N + Sbjct: 198 SRGGGQVPFISINYGTDTSKEGRLLIKQLLKATQAGLGKG-ETPIFPIQIFKMKKGVNFE 256 Query: 342 KGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTP------MGCRSFLGVWENEN 395 + DPNYD+ +LALE ++R++P+ D P MGCR+ V N + Sbjct: 257 ECDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVCYMGCRT--RVMSNIH 314 Query: 396 GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKAR 455 GE+ GR NL S+NL ++AL G + F++ L+ L + + L+ R +AR Sbjct: 315 GEETAIGRGNLSFTSINLVKLAL-ISGSQEAFFEALNYYLDVGIQQLLERFEYQCTKRAR 373 Query: 456 VAPILYMEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQL 513 LY +G G +L +D V+ I K G ++SLG+IG+ E + AL G H D E Sbjct: 374 DFRFLYSQGVWRGGEKLQPEDSVASILKQG--TLSLGFIGLAECLVALTGKHHGEDEESW 431 Query: 514 RAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYY 573 + G I+ +R +D+ EE FS+ +TP+E L +F + D EFGV+ G+T+ YY Sbjct: 432 KL-GYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVISGITNHNYY 490 Query: 574 TNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPN-IQHNLKALEDVWDYSYQHV 632 TNSFH+ V + +KI E P+ L NGG I Y E HN KAL+ + ++ Sbjct: 491 TNSFHIPVYYDIQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQIVQAMAENG 550 Query: 633 PYYGT-NTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPF 691 YG+ N P+D C C + G G CP CGN D + + RR+ GYL D + Sbjct: 551 VGYGSINHPVDRCKCCSYHGVI-----GNECPSCGNEDEANIERIRRITGYL-VGDMSKW 604 Query: 692 NAGKQEEVKRRVKH 705 N+ K+ E RVKH Sbjct: 605 NSAKRSEEMDRVKH 618 >UniRef50_C5H7Q4 Anaerobic nucleoside diphosphate reductase n=3 Tax=unclassified Myoviridae RepID=C5H7Q4_9CAUD Length = 714 Score = 295 bits (754), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 220/733 (30%), Positives = 351/733 (47%), Gaps = 58/733 (7%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAA----------EVDDADYCATVAAVVSEQMQGR 53 ++K++G + IK+ + AK+A +V A A + +V Q Sbjct: 5 QIIKKNG---SLEEPDIKKVLAAVAKSANRVGYKELPPDVTQALESAFMRILVKSTKQNN 61 Query: 54 NQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASL 113 + +N+I + VE L + ++ +Y YR+ R + Q L ++T +L Sbjct: 62 LLISVNDIHSIVEGALAEVNH-EIYESYSTYRN-------YRKEVAQNWDELYQKTKDTL 113 Query: 114 L---NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFF 170 ENAN DS +I T+ ++ G + K +Q+ L + ++A E+G I+ HDL F Sbjct: 114 FLGDRENANFDSSLISTKGSIIRGYLTKEIFKQYHLTPEELEAIEKGFIYIHDLR-DLIF 172 Query: 171 PMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDE 230 NC L D+ +L GF+M E PKS+ +A V ++ + +GG T+ ID+ Sbjct: 173 GGINCCLFDIGKVLKGGFEMSGIEYCEPKSVLSALQVIGDVVLSATAQQFGGFTLAEIDK 232 Query: 231 VLAPFVTASYNKHRKTAEEWNIPDAE--GYANSRTIKECYDAFQSLEYEVNTLHTANGQT 288 VL P+ S H + A + IP Y + E FQSLE ++NT+ + G Sbjct: 233 VLVPYAKKSLRYHAEKASSYGIPKEHYHNYVMEQLQIELTQGFQSLEMKLNTVPCSRGDF 292 Query: 289 PFVTFGFGLGTSWESR-------LIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK 341 F T FGL S S +I ++L R+ G GK++K VFPKLV+ I D H Sbjct: 293 AFTTLTFGLLDSDMSNEDNRLQYMIASTLLDVRMNGQGKSKKPVVFPKLVY-IYDQKRHD 351 Query: 342 KGDPNYDIKQLALECASKRMYPDILNYD------QVVKVTGSFKTPMGCRSFLGVWENEN 395 + + A+EC SK MYPD L+ + + +G +PMGCR+FL + NE+ Sbjct: 352 ENICQGHLYSKAIECCSKAMYPDFLSVSGHGAVAEAFERSGKVISPMGCRAFLSPYFNED 411 Query: 396 GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKAR 455 GE+ + GR N+G +SLNLP I +K + FWK LD+ L + R R + + A Sbjct: 412 GEEFYVGRANIGAVSLNLPMIYQYSKENGLDFWKELDKYLEMIRNFHKKRYEMIANMPAS 471 Query: 456 VAPILYMEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQL 513 P+ + +G G + D +I K+ AS G + E ++ L G+ +++ Sbjct: 472 SNPLAFTQGGLYKGTKKPTDKVGWDIVKSFTAS--FGVTALDE-LSVLAEGKRLHEVGSY 528 Query: 514 RAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYY 573 + ++ + +++K E G+ +++Y TP+E+LC + FGV+ GV+DK Y+ Sbjct: 529 -SFTYDVLAYINMKTEEFKNEDGFLYAVYGTPAESLCGTQLKQFRDMFGVIKGVSDKEYF 587 Query: 574 TNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVP 633 TNSFH++V ++P++K D E P+ + GG I Y N + NL AL+ Sbjct: 588 TNSFHMNVAADISPFEKQDLEEPFFHICRGGRIQYVRVANPE-NLSALKSCITRGMLKGF 646 Query: 634 YYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARP--- 690 Y G N + C CG + + C C +HD +SV RVCGYLG + Sbjct: 647 YQGLNFDLAICEHCGNRPKADVEE----CEVCHSHD---ISVINRVCGYLGWTKIKGESR 699 Query: 691 FNAGKQEEVKRRV 703 N K E++ RV Sbjct: 700 MNDAKIAEIRDRV 712 >UniRef50_C3RPW0 Anaerobic ribonucleoside-triphosphate reductase n=18 Tax=Bacteria RepID=C3RPW0_9MOLU Length = 718 Score = 291 bits (744), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 200/666 (30%), Positives = 335/666 (50%), Gaps = 65/666 (9%) Query: 75 KQLARAYIEYR-HDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLA 133 K +A +Y YR + +D + Q + Q N L ENAN DS ++ T++ L+ Sbjct: 77 KDIATSYRNYRNYKQDFVKMLDNVYKQSV-----QINYVRLKENANMDSALVSTKKTLVG 131 Query: 134 GIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNA 193 + K + + L ++A E G I+ HD+ S NC L D+ +L+ GF+MGN Sbjct: 132 NALGKEFYIKEFLNESEIEACEDGYIYIHDM--SSRLDTMNCCLFDMDTVLSGGFEMGNR 189 Query: 194 EIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHR--------- 244 PK++ A V II+ A+ YGG T+ +D++L + S+NK+ Sbjct: 190 WYNEPKTLDVAFDVIGDIISSTAAQQYGGFTVPEVDKILEKYAQKSFNKYLEEYLSIVQS 249 Query: 245 --KTAEEWNIPDAEG--YANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 K ++ A+G YA +T +EC +Q +EY++N++ ++ G PFVTF FGL S Sbjct: 250 LLKDTDKKQQFLAKGLQYAYKKTQEECRQGYQGIEYKLNSVSSSRGDYPFVTFTFGLSKS 309 Query: 301 WESRLIQESILRNRIAGLGKN--RKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECAS 358 ++I ++IL G GK+ + +FPKLVF L H K Y++ + AL C+S Sbjct: 310 LLGQMISKTILNVHRIGQGKDGYKTPVLFPKLVFLYDKNL-HGKDKELYEVYKTALLCSS 368 Query: 359 KRMYPDILNYDQVVKVTGSFK------TPMGCRSFLGVW--------ENENGEQIHDGRN 404 K MYPD L+ V+ +K +PMGCR+FL W +E I+ GR Sbjct: 369 KTMYPDWLSLTGEGYVSNIYKKYRKVISPMGCRAFLSPWYERGGMYPADEKDTPIYVGRF 428 Query: 405 NLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEG 464 N G ISL+LP I ++ + F+++LD L + R L KA + P+ + +G Sbjct: 429 NCGAISLHLPMIFEKSLKENKDFYEILDYYLEMIRDIHKRTKEHLARKKASINPLAFCQG 488 Query: 465 AC-GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKG---IAI 520 G L+ +D+++ + ++ ++ S G ++E + +Y+N+ L G + + Sbjct: 489 GFYGGTLDLNDNIAPLLES--STFSFGITALNEL-------QELYNNKSLVEDGKFAVEV 539 Query: 521 VERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLD 580 +E + ++Q+K+E +++Y TP+ENLC + ++G++ V+D+ Y +NSFH Sbjct: 540 MEHINNKLNQYKKEDHILYAVYGTPAENLCGVQIKQFRNKYGIIKKVSDRDYVSNSFHCH 599 Query: 581 VEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTP 640 V ++++P K + E + L NGG I Y YP + +N+KA+E + + Y G N Sbjct: 600 VTEEISPIQKQNLEKRFWDLFNGGKIQYVRYP-LNYNIKAMETLILRAMDLGFYEGVNLA 658 Query: 641 IDECYECGFTG-EFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDAR---PFNAGKQ 696 + C +CG+ E E CPKCG+ + +++ R+ GYL + N K Sbjct: 659 LSFCDDCGYEQLEME------VCPKCGSKNLTKID---RMNGYLAYSRVKGESRLNDAKM 709 Query: 697 EEVKRR 702 E+K R Sbjct: 710 SEIKER 715 >UniRef50_B1YME3 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Bacillales RepID=B1YME3_EXIS2 Length = 612 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 207/616 (33%), Positives = 301/616 (48%), Gaps = 35/616 (5%) Query: 105 LVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDL 164 +VE + + ENAN D K + + LA + AK + LL + QA I+ HD Sbjct: 10 IVEHPSTDEMQENANVDGKSPLGKLNRLAAVTAKQMMQDMLLSAEAKQALAENIIYIHDA 69 Query: 165 DYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTT 224 DY C+ + L +LT GF M + I P + I +A A+ A I+ + +GG + Sbjct: 70 DYY-VTGTTTCVQLPLGRLLTDGFTMTHGSIRPAQDIRSALALAAIIMQANQNMQHGGQS 128 Query: 225 INRIDEVLAPFVTASYNKHRKTAEE----WNIPDAEGYANSRTIKECYDAFQSLEYEVNT 280 D LAPFV ++ + K E W+ YA S T + Y A ++ + N+ Sbjct: 129 YPMFDFDLAPFVEKTFQRQLKKIRELVPKWSNRRKRAYAMSETYELTYQACEAFIHNTNS 188 Query: 281 LHT-ANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLN 339 +H+ GQ PF++ +G TS RL+ ++L AGLGK +T +FP +F ++ G+N Sbjct: 189 MHSRGGGQVPFISINYGTDTSTFGRLLIRALLEATRAGLGKG-ETPIFPIQIFKVKTGVN 247 Query: 340 HKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTP------MGCRSFLGVWEN 393 + DPNYD+ QLA E KR++P+ D S TP MGCR+ V EN Sbjct: 248 FQSEDPNYDLFQLATEVTGKRLFPNFAFLD--APFNQSTGTPDEEVAYMGCRT--RVLEN 303 Query: 394 ENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVK 453 G GR NL SLNL R+AL + + F + ++ + L+ R Sbjct: 304 RQGRASVVGRGNLSFTSLNLVRLALMTQSLDRMFEAVTTYTTLICEQ-LLERYHYQANRT 362 Query: 454 ARVAPILYME-GACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQ 512 A LY G L D V + + G ++S+G+IG+ E + L G+H ++E Sbjct: 363 ADEFTFLYRHIWRGGETLAGSDRVEPVLRQG--TLSVGFIGLAEALIVL-TGQHHGESEL 419 Query: 513 LRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGY 572 G A++ +R DQ+ E+TG FS+ +TP+E L +F D +FGV+ VTDK Y Sbjct: 420 AHGIGQALIRLIRTIADQYGEKTGLNFSVLATPAEGLSGKFTVADKEQFGVIERVTDKPY 479 Query: 573 YTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPN-IQHNLKALEDVWDYSYQH 631 YTNSFHL V V +KI EAP+ L NGG I Y E + N +A+ED+ + Sbjct: 480 YTNSFHLPVGTNVTIREKIRLEAPFHALCNGGHITYVETDGALAENPEAIEDIVRLMAES 539 Query: 632 VPYYGT-NTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYL-GSPDAR 689 YG+ N PID C C E CP CG + R+ RR+ GYL G+ D Sbjct: 540 GIGYGSINHPIDRCLTCRTEQTMEQ-----ACPVCGGEEIERI---RRITGYLVGTMDR- 590 Query: 690 PFNAGKQEEVKRRVKH 705 +N K+ E + RVKH Sbjct: 591 -WNPAKRAEEQDRVKH 605 >UniRef50_A6LHE5 Anaerobic ribonucleoside-triphosphate reductase n=20 Tax=Bacteria RepID=A6LHE5_PARD8 Length = 735 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 220/752 (29%), Positives = 359/752 (47%), Gaps = 65/752 (8%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEV-DDADYCATVAAVVSEQMQGRNQVDIN 59 M V+KRDG V F E+I AI +A + +D + +S +G Q+ + Sbjct: 1 MIQTVVKRDGRIVGFNEEKIVTAIRKAMLHTDKGEDMQLIRQITDHIS--FKGEPQMTVE 58 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 IQ AVE +LM+ K +A+ YI YR+ R + R+ + R ++ + + ENAN Sbjct: 59 AIQDAVELELMASSRKDVAQKYIAYRNQRSVARKAKTR--DMFLEIINIKSNDITRENAN 116 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 ++ + K + +LL +V +A +H HD DY P + C+ Sbjct: 117 MNADTPAGMMMKFSSETTKPFVDDYLLSEEVKEAVSNNYLHIHDKDYYPTKSL-TCVQHP 175 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 L +L GF G+ E P K I TA+ + + + ++GG I D LAP+V S Sbjct: 176 LDRILKYGFSAGHGESRPAKRIETASILGCISLETAQNEMHGGQAIPAFDFYLAPYVRNS 235 Query: 240 YNKHRKTAEE---------WNIPDAE----------------GYANSRTIKECYDAFQSL 274 + + KT E+ +N P + +A +RT+ + + ++ Sbjct: 236 FIEEVKTLEDLYGQDFSHLYNKPIDDYQTQTLDGLSGDRRVIQHAINRTVSRVHQSMEAF 295 Query: 275 EYEVNTLHTANG-QTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFA 333 + +NT+H+ G Q F + +G TS E R I +L++ G+G N +TA+FP ++ Sbjct: 296 IHNMNTIHSRGGNQVVFSSINYGTDTSAEGRCIIRELLKSTYRGVG-NGETAIFPIQIWK 354 Query: 334 IRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKT-----------PM 382 + G+++ D NYD+ QLA + ++R +P+ LN D + +K M Sbjct: 355 KKRGVSYLPEDRNYDLYQLACKVTARRFFPNFLNLDATFNQSEDWKADDPQRYIHEVATM 414 Query: 383 GCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDE------ATFWKLLDERLV 436 GCR+ V+EN G + GR NL ++N+ R+A+E E A F+ LD L Sbjct: 415 GCRT--RVFENRFGPKTSIGRGNLSFSTINIVRLAIECMQVENKEERIALFFAKLDHMLE 472 Query: 437 LARKALMTRIARLEGVKARVAPILYMEGACGV-RLNADDDVSEIFKNGRASISLGYIGIH 495 L + L R+ + A+ P+L G +L +D ++ + G ++ +G+IG+ Sbjct: 473 LTARQLHERMEFQKTAYAKQFPLLMSSLWLGSEKLKPNDSIASVINQG--TLGIGFIGLA 530 Query: 496 ETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCR 555 E + AL G H D E +A GI IV +R +Q+ E+ + +S+ +TP+E L +F Sbjct: 531 ECLVALTGKHHGED-EDSQALGIRIVTYIRDRANQFSEQYQHNYSVLATPAEGLSGKFTG 589 Query: 556 LDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYP-NI 614 D +FG +PG+TD+ YYTNS H+ V K + K + EAPY L GG I Y E + Sbjct: 590 KDRKKFGSLPGITDRDYYTNSNHVPVYYKCSARHKAEVEAPYHDLTRGGHIFYVEMDGDA 649 Query: 615 QHNLKALEDVWDYSYQHVPYYGT-NTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRV 673 HN +A+ V D ++ YG+ N + C +CG+ T CPKCG+ ++ Sbjct: 650 THNPEAIMRVVDMMDKYNIGYGSVNHNRNRCLDCGYEN---STPNLEACPKCGSKHLDKL 706 Query: 674 SVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 +R+ GYL R +N K E+ R+ H Sbjct: 707 ---QRITGYLVGTTDR-WNNAKLSELNDRITH 734 >UniRef50_B2RKM0 Anaerobic ribonucleoside-triphosphate reductase n=14 Tax=Bacteria RepID=B2RKM0_PORG3 Length = 798 Score = 287 bits (735), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 229/813 (28%), Positives = 361/813 (44%), Gaps = 133/813 (16%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDD--ADYCATVAAVVSEQMQGRNQVDINEIQ 62 ++KRDG F E+I++AI++A +A V + A V +V Q V + +IQ Sbjct: 8 IVKRDGHVQSFDPEKIRQAIIKAYRAGGVHEEAARIDNIVQSVTDFARQSGELVTVEQIQ 67 Query: 63 TAVENQLMS-GPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 VE +LM P+ +A+ YI YR R +ER+KR + + G+V + NAN Sbjct: 68 DRVEEELMRLNPF--IAKKYIIYREWRTVERDKRTSMKHTMDGIVTIEKNDVNLGNANMS 125 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 S Q A V K YA ++LL +AH GDIH HDLDY P C+ D+ Sbjct: 126 SHTPAGQMMTFASEVTKDYASKYLLSLRYSRAHRAGDIHIHDLDYYPT-KTTTCVQYDIA 184 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 + +GF+ N I P++I + + I + +GG I D +AP V S+ Sbjct: 185 DLYERGFRTKNGSIRTPQNIHSYATLATIIFQTNQNEQHGGQAIPAFDFFMAPGVRKSFV 244 Query: 242 KH--------------RKTAEEWNIPDA-------------------EGYANS------- 261 H T +P A EG ++ Sbjct: 245 THLIERLRFVLELRQPTNTDLSTTLPKAIRNLTPLLTDSPQEAGRLYEGLCSASFPFSST 304 Query: 262 -----------RTIKECYDAFQSLEYEVNTLHTANG-QTPFVTFGFGLGTSWESRLIQES 309 +T K+ + A + + +NT+H+ G Q F + +G TS E R++ E Sbjct: 305 EVEIALATAFRKTRKDTHQAMEGFIHNLNTMHSRGGNQVVFSSINYGTDTSPEGRMVMEE 364 Query: 310 ILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD--------------------PNYDI 349 +LR GLG + +FP +F +++G+N+ + D PN+D+ Sbjct: 365 LLRATEEGLGHG-EVPIFPIQIFKVKEGINYSEADVKSALENFDDAMAGKVLFSAPNFDL 423 Query: 350 KQLALECASKRMYPDILNYDQVVKVTGSFKT-----------PMGCRSFLGVWENENGEQ 398 A +K ++P+ + D + ++ MGCR+ V++N NG + Sbjct: 424 LLKACATTAKALFPNFVFLDTPFNLHEDWRADDPKRYLQEVATMGCRT--RVFDNVNGPK 481 Query: 399 IHDGRNNLGVISLNLPRIALEAK---------GDEAT--------FWKLLDERLVLARKA 441 GR NL S+NLPR+A+EA+ GD+ T F + + L Sbjct: 482 SSIGRGNLSFTSMNLPRLAIEARHEAEENCPDGDKETIRSEARLLFLESVRRMSTLIADQ 541 Query: 442 LMTRIARLEGVKARVAPILYMEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHETIN 499 L R AR P + G L +++V ++ K+G ++ +G+IG H + Sbjct: 542 LYDRYCYQRTALARQFPFMMGNDVWKGGAALEPNEEVGDVIKSG--TLGIGFIGGHNAMV 599 Query: 500 ALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTA 559 A++G H ++ AI + ++K + +S+ +TP+E L RF R+D Sbjct: 600 AIYGEGHAHNKAAWNTLYDAI-SVMNDVAQEYKRKYHLNYSVLATPAEGLSGRFTRMDRK 658 Query: 560 EFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEY-----PNI 614 +G++PGVTD YY NSFH+DV + + +KI EAP+ + GG I Y E N+ Sbjct: 659 RYGIIPGVTDLDYYVNSFHVDVREPIGIAEKIKCEAPFHAITGGGHITYVELDGEAKKNV 718 Query: 615 QHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVS 674 LK ++ + D +++ Y N P+D C CGF G CP CG + R++ Sbjct: 719 SVILKIVKMMKD---ENIGYGSINHPVDTCKGCGFKGVIYD-----KCPVCG---SDRIA 767 Query: 675 VTRRVCGYL-GSPDARPFNAGKQEEVKRRVKHL 706 RR+ GYL GS D +N+ KQ E RVKHL Sbjct: 768 RLRRITGYLTGSLDT--WNSAKQAEEHDRVKHL 798 >UniRef50_C8P1M7 Anaerobic ribonucleoside-triphosphate reductase n=6 Tax=Bacteria RepID=C8P1M7_ERYRH Length = 783 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 231/782 (29%), Positives = 360/782 (46%), Gaps = 95/782 (12%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEV-----DDADYC-ATVAAVVSEQMQGRNQVDI 58 ++KRD K+ F E+I AI + + E DDA++ V + E + + I Sbjct: 12 ILKRDNQKMKFNGEKIAIAIKKGFDSLESNKYSNDDANHVYMEVLKQIEEIATHEDYISI 71 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIERE----KRGRLNQEIRGL--VEQTNAS 112 IQ +E +L+ Y + ++ +YR+ R+ R+ K+ + + I L E Sbjct: 72 EHIQDLIERELLRQNYTDVYESFSQYRNRRNESRKIFISKQHKFLKAIEKLNQKEAVEED 131 Query: 113 LLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPM 172 ENAN D V+K +A+ + + D +AH+ G IH HD+D+ P Sbjct: 132 SKRENANVDGNSPMGMMLQFGSTVSKEFAKAYQMSEDYYEAHDAGQIHIHDMDFLPMGTT 191 Query: 173 FNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVL 232 C I+L+ + GF G+ + PK I + A+ A I + +GG +I D + Sbjct: 192 -TCNQINLEQLFENGFSTGHGHLRKPKDIISYAALAAIAIQSNQNDQHGGQSIPAFDYYM 250 Query: 233 APFVTASYNKH--------------------------------------------RKTAE 248 AP V A++ K +K A Sbjct: 251 APGVLATFKKQFKQKLYDFLEVTEHLEEVDFTKIIKHIDQLPSITVDIQSFEPLMKKDAT 310 Query: 249 EWNIPD-AEGYANSRTIKECYDAFQSLEYEVNTLHT-ANGQTPFVTFGFGLGTSWESRLI 306 + D A A T + + A ++ + +NT+H+ A Q PF + FG S E R++ Sbjct: 311 LMGLLDKAYDKALRTTDRITFQAMEAFIHNLNTMHSRAGAQVPFSSINFGTDISPEGRMV 370 Query: 307 QESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDIL 366 E+ L+ GLGK +T +FP +F I++G+N+ DPNYD+ +LA++ ++KR++P+ Sbjct: 371 MENYLKALDKGLGKG-ETPIFPISIFKIKEGVNYYPEDPNYDLFKLAIKTSAKRLFPNFS 429 Query: 367 NYD-----QVVKVTGSFKTP---MGCRS-FLGVWENENGEQIHDGRNNLGVISLNLPRIA 417 D Q K G ++T MGCR+ +G + E++ GR NL S+NL R+ Sbjct: 430 FIDSPFNKQYYK-DGRYETEITYMGCRTRVMGDVTDPEHEEV-TGRGNLSFTSINLVRLG 487 Query: 418 LE------AKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVR 469 ++ + D F+K L+ + L + L+ R L +G Sbjct: 488 IKHGILNHEEPDFDGFYKELEHLMDLVKDQLLERFEIQCNKSVSNFKFLLGQGVWKNSKD 547 Query: 470 LNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVD 529 L D++ ++ K+G S++ G+IG+ E + AL G H E R G+ IV +R D Sbjct: 548 LKPKDNLRKVLKHG--SLAFGFIGLAECLKALTGSHHGESEESQRI-GLEIVGFMRDLAD 604 Query: 530 QWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYD 589 ++ EE FSL +TP+E L RF +D + FG +P VTD+ YYTNSFH+ V ++ D Sbjct: 605 KYTEEEQLNFSLIATPAEGLSGRFVGIDRSIFGSIPEVTDRTYYTNSFHVPVYYDISIKD 664 Query: 590 KIDFEAPYPPLANGGFICYGEYP-NIQHNLKALEDVWDYSYQHVPYYGT-NTPIDECYEC 647 K+ EAPY L NGG I Y E + NL+A E+V + + YG N P+D C Sbjct: 665 KLAIEAPYHALTNGGHITYVELDGDTTQNLEAFEEVVRMMHDNEIGYGAINHPVDRDPLC 724 Query: 648 GFTGEFECTSKGFTCPKCGNHDAS---RVSVTRRVCGYL-GSPDARPFNAGKQEEVKRRV 703 GFTG CP CG + RR+ GYL G+ D FN K+ E RV Sbjct: 725 GFTGIINE-----ECPSCGRLETDGDYGFERIRRITGYLVGTLDR--FNDAKRSEEHDRV 777 Query: 704 KH 705 KH Sbjct: 778 KH 779 >UniRef50_B8G1P5 Anaerobic ribonucleoside-triphosphate reductase n=37 Tax=Bacteria RepID=B8G1P5_DESHD Length = 789 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 164/463 (35%), Positives = 260/463 (56%), Gaps = 27/463 (5%) Query: 259 ANSRTIKECYDAFQSLEYEVNTLHT-ANGQTPFVTFGFGLGTSWESRLIQESILRNRIAG 317 A + T K+ Y A ++L + +NT+H+ A Q PF + +G T+ E R++ +++L AG Sbjct: 326 ALAETDKKTYQAMEALVHNLNTMHSRAGAQIPFSSLNYGTDTTPEGRMVVKNLLLATEAG 385 Query: 318 LGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVK---- 373 LG N +T +FP +F +++G+N+ DPNYD+ QLA ++KR++P+ D Sbjct: 386 LG-NGETPIFPIHIFKVKEGVNYNPSDPNYDLFQLACRVSAKRLFPNFSFIDAPFNLQYY 444 Query: 374 VTGSFKTP---MGCRS-FLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWK 429 V G +T MGCR+ +G + + E I GR NL ++NLPR+A+++ F+ Sbjct: 445 VPGRPETEIAYMGCRTRVIGNIYDPSRETIF-GRGNLSFTTINLPRLAIKSHQSRTEFFA 503 Query: 430 LLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVRLNADDDVSEIFKNGRASI 487 +LDE++ L L+ R K + P L +G +L DD++ E+ K+G ++ Sbjct: 504 MLDEKIDLVINQLLERFEIQARKKVKNFPFLMGQGIWLDSDQLGWDDEIREVLKHG--TL 561 Query: 488 SLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSE 547 S+G+IG+ E + L G+H ++E+ R G+ IV++LR+ +D+ E G FSL +TP+E Sbjct: 562 SMGFIGLAECLMVL-TGQHHGESEEARELGLEIVQQLRRRMDEAGREYGLNFSLLATPAE 620 Query: 548 NLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFIC 607 L RF ++D FG +PG+TDK YYTNSFH+ V ++ + KI EAPY L N G I Sbjct: 621 GLSGRFIKMDRELFGSIPGITDKEYYTNSFHIPVSFPISAFHKITIEAPYHELTNAGHIT 680 Query: 608 YGEYP-NIQHNLKALEDVWDYSYQH-VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKC 665 Y E + NL+A E + + + + N P+D CG+TG G CP+C Sbjct: 681 YVEVDGDPTQNLEAFEKIVRCMKESGIGFGAVNHPVDRDPVCGYTGII-----GNECPRC 735 Query: 666 GNHDASR-VSVTRRVCGYL-GSPDARPFNAGKQEEVKRRVKHL 706 G +++ RR+ GYL G+ D FN K+ EV+ R+KHL Sbjct: 736 GREESTAPFERIRRITGYLVGTLDR--FNDAKKAEVRDRIKHL 776 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 109/247 (44%), Gaps = 7/247 (2%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ---GRNQVD 57 M + KRDG + PF E+I AI +AA A D +A V ++ + Sbjct: 1 MITKIRKRDGREAPFNIEKIANAIFKAASATGGKDYQSSLLLAEEVVNYLEVNLHKKVPS 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLV--EQTNASLLN 115 + EIQ AVE L+ + + A+ +I YR +R RE RL + L E + + Sbjct: 61 VEEIQDAVEKILIERGHARTAKEFILYRAERTRVREMDTRLMKVYEELTFKEAKDNDMKR 120 Query: 116 ENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 ENAN D AK + +L + +AH+ GDIH HD+D+ C Sbjct: 121 ENANIDGDTAMGTMLRYGSEGAKQFNEMFVLKPEHSKAHKEGDIHIHDMDFLTL--TTTC 178 Query: 176 MLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 ID+ + +GF G+ + P I + +A+ I + +GG +I D +AP Sbjct: 179 CQIDIIKLFKEGFGTGHGFLREPNDIQSYSALACIAIQSNQNDQHGGQSIPNFDYGMAPG 238 Query: 236 VTASYNK 242 V +Y K Sbjct: 239 VAKTYIK 245 >UniRef50_C7NCJ9 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NCJ9_LEPBD Length = 762 Score = 244 bits (624), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 205/742 (27%), Positives = 329/742 (44%), Gaps = 157/742 (21%) Query: 98 LNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERG 157 L + I G+V + NENAN S Q A V+K YA ++L+ +AHE+G Sbjct: 41 LREIISGIVNVESNDTCNENANMSSMTPAGQMMKFASEVSKIYALENLVSPKFKEAHEKG 100 Query: 158 DIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVAS 217 IH HDLD+ C+ DL M GF + I +SIST + I + Sbjct: 101 LIHIHDLDFYSS-KTTTCLQYDLADMFEHGFYTKHGYIREAQSISTYATLATIIFQTNQN 159 Query: 218 HIYGGTTINRIDEVLAPFVTASYNKHRK---------------------TAEEWNIPDA- 255 +GG I D +A V S+ +H + A+E+ + + Sbjct: 160 EQHGGQAIPAFDFYMAKGVLKSFRRHLRRRILSFVEIKNGVEITKEYENNAKEFLLKNIF 219 Query: 256 ----------------------------EGYANSRTIKECYDAFQSLEYEVNTLHTANG- 286 E Y +++ E Y A + + +NT+H+ G Sbjct: 220 SIKCSENEIKLLEENFGINKNDLIKLLLEAYEDTKN--ETYQAMEGFLHNLNTMHSRGGN 277 Query: 287 QTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD-- 344 Q F + +G TS E R++ +L+ +GLGK+ +T +FP +F +++GLN+ + D Sbjct: 278 QVVFSSINYGTDTSEEGRMVIRELLKATSSGLGKS-ETPIFPIQIFKVKEGLNYTENDYN 336 Query: 345 ---------------------------------PNYDIKQLALECASKRMYPDILNYDQV 371 PN+D+ L+ E +S+R++P+ + D Sbjct: 337 LAQSDFDTALESVKNQKISYENDSENEKIKFEAPNFDLLLLSCETSSRRLFPNFVFLDSE 396 Query: 372 VKVTGSFK-----------TPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIAL-- 418 ++ MGCR+ V+EN NGE+ GR NL S+N PRIA+ Sbjct: 397 FNKHEKWRIDDPERYKYEIATMGCRT--RVFENINGEKSSLGRGNLSFTSINFPRIAIIT 454 Query: 419 --------------------EAKGDEAT------FWKLLDERLVLARKALMTRIARLEGV 452 E K ++ F + + E LA + L R + Sbjct: 455 RKNVEKEIAEMEKAGKFLNEEEKNNKKIELLTKEFQEKVLETTHLAGEQLYERYNFQKTA 514 Query: 453 KARVAPILY---MEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYD 509 A+ P + + GV+ + +++V E +G S+S+G++G + ALF EH Sbjct: 515 LAKQFPFMRSNNLWKGLGVK-DGNEEVREAINSG--SLSIGFVGGANAMYALFDAEH--G 569 Query: 510 NEQLRAKGI-AIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVT 568 ++ K + ++++ D+++E+ +S+ +TP+E+L RF R+D EFGV+ VT Sbjct: 570 TSEIAYKVLYDTIKKMGFVADEFREKYHLNYSILATPAESLAGRFLRIDRNEFGVIKNVT 629 Query: 569 DKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEY-----PNIQHNLKALED 623 D+ YY NSFH+DV+K+++ +DKI EAP+ L GG I Y E N+ LK ++ Sbjct: 630 DRDYYVNSFHIDVKKEISLFDKIRKEAPFHKLTKGGHITYVELDGEARKNMGVMLKIVKV 689 Query: 624 VWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYL 683 + D + Y N P+D C +CG E K CP CG+H+ SR+ RR+ GYL Sbjct: 690 MKDTG---IGYGSINHPVDRCRDCG--TEAIIYDK---CPICGSHNISRI---RRITGYL 738 Query: 684 GSPDARPFNAGKQEEVKRRVKH 705 + D +N+ KQ E RVKH Sbjct: 739 -TGDLDSWNSAKQAEEHDRVKH 759 >UniRef50_C8W489 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W489_DESAS Length = 1197 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 147/437 (33%), Positives = 230/437 (52%), Gaps = 40/437 (9%) Query: 284 ANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKG 343 A Q PF + G TS SR + ++L AGLG+ + +FP ++F +++G+N Sbjct: 784 AGAQVPFSSLNLGTETSEASRKVTRNLLMAYEAGLGRG-ENPIFPNIIFRVKEGINLNPD 842 Query: 344 DPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTP-------MGCRSFLGVWENENG 396 DPNYD+ ++AL ASKR+ P D F +P MGCR+ V N +G Sbjct: 843 DPNYDLFKVALRVASKRLNPTFSFMD------AGFNSPFGDQVSYMGCRT--RVMSNRHG 894 Query: 397 EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARV 456 + + DGR NL ++NLPR+A++A+ + A F++ L++ L+ + L R +K R Sbjct: 895 QAVTDGRGNLSFTTVNLPRVAIKAERNMAKFYRDLEDIFDLSARQLYHRYQVQAKLKVRD 954 Query: 457 API-----LYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNE 511 P LYM+ L +D + K+G ++++G+IG+ ET+ AL G H +++ Sbjct: 955 MPFVMGQGLYMDSQG---LRPEDVIEPAIKHG--TLAIGFIGLAETLTALTGKHHG-ESK 1008 Query: 512 QLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG 571 + G IV + + VD+ E+ ++ +TP+E L RF +LD E+G++PGVT+K Sbjct: 1009 SAQEIGQEIVAFMAKKVDEAAEKYDKNYTFLATPAEGLSGRFIKLDRREYGIIPGVTNKE 1068 Query: 572 YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEY--PNIQHNLKALEDVWDYSY 629 YYTNSFH+ V ++ +DKI E Y N G I Y E P + HN++A+E + + Sbjct: 1069 YYTNSFHIPVNYPISIFDKISLEGVYHKYCNAGHISYVELEAPPV-HNIEAMESIVRHMK 1127 Query: 630 -QHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDA 688 ++ Y N P+D C C G CP+CG+ RV RR+ GYL + D Sbjct: 1128 DSNMGYAAINYPVDFCTGCSHLGVINED----ICPRCGSPFIRRV---RRITGYLSTVDR 1180 Query: 689 RPFNAGKQEEVKRRVKH 705 FN K E+K R+ H Sbjct: 1181 --FNDSKVSELKERITH 1195 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 35/290 (12%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR---NQVD 57 M + KRDG +V F ++I +AI RAA++ +D + V + ++ + N Sbjct: 1 MFNTIKKRDGREVSFDDKKITDAIFRAARSVGGEDRQLAMELTIEVLKMIKAKYNGNAFG 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 + ++Q VE L+ + + A+AYI YR R RE +G L + ++ +T+ EN Sbjct: 61 VEDVQDIVEKVLIENGHARTAKAYILYRDRRTRMREAKGELMDAVEEILVETS----KEN 116 Query: 118 ANKDSKVIPTQRDL-LAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 AN + P+ + L +A +K Y L+P ++ QAH RGDIH HDLD+ + C+ Sbjct: 117 ANVSNS--PSAKMLQIASAASKKYYLTRLIPDELSQAHTRGDIHIHDLDF--YGKTLTCI 172 Query: 177 LIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 I LK +L +GF G+ I PP+ ++ATA+ A I+ + ++GG + D +AP+V Sbjct: 173 QIPLKRLLEEGFDNGHGYIRPPQRPNSATALAAIILQSSQNDMHGGQSFAFFDRDIAPYV 232 Query: 237 TASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANG 286 + A E E + A ++L Y +N++H+ G Sbjct: 233 --------ENASE---------------DETFQAMEALVYNLNSMHSLRG 259 >UniRef50_C9RJ61 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ61_FIBSS Length = 542 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 150/564 (26%), Positives = 261/564 (46%), Gaps = 63/564 (11%) Query: 146 LPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTAT 205 +P + H +G IH HDL++ + +NC+ + + ++ + +I+ +ST Sbjct: 31 IPERFAEFHRQGYIHIHDLEF--YDKTYNCIGVSVSDLVK------DTDIQ----VSTVL 78 Query: 206 AVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIK 265 + I + ++ GG D D Y + + Sbjct: 79 RRLYRGIVSLTNNQSGGIGFLDFD-----------------------GDMAAYRMDESDE 115 Query: 266 ECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTA 325 +AF++ ++N + P+ T G TS ++R I +++L + G K Sbjct: 116 ILTEAFRNFFEDLNIYSRKGCEKPYTTLNIGCRTSTKARRIAKAVLSAALEG-NSEGKPF 174 Query: 326 VFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTP--MG 383 +FP +VF +N + PNYDI Q+AL+ + RM P N D + MG Sbjct: 175 IFPNIVFKYSRAINGTESSPNYDIFQMALKGTASRMIPTYFNCDAPFNRNANPNKIGIMG 234 Query: 384 CRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALM 443 CR+ V + +G R N+ ++ NL R+A+++ D F K + ++ L+ Sbjct: 235 CRT--RVVADIHGNTTGLNRGNIACVTTNLVRLAIDSNHDFQVFLKKIGTLFEECKELLL 292 Query: 444 TRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFG 503 R A L +PI +E G+ L+++ +G ++S+G+IG+ + ++ L Sbjct: 293 HRFATL---CKGTSPIFAIEK--GLYLDSEKGREVALMHG--TLSIGFIGLWDALSELLD 345 Query: 504 GEHVYDNEQLR---AKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAE 560 + D + LR K +A+++ +RQ VD + E++ FSL ++ +E F D E Sbjct: 346 TD-FSDVDNLRMHHGKALAVLQVMRQKVDSFIEQSHMNFSLLASAAEATTGIFADRDFKE 404 Query: 561 FGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQ-HNLK 619 +G+ KG+YTNSFH+ V+ + ++KI EAP+ L NGG I Y E +N+ Sbjct: 405 YGIQCKSAAKGFYTNSFHIPVDTSIRLFEKIQLEAPFHKLCNGGCISYVELDEQPCYNVG 464 Query: 620 ALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRR 678 A++ V +++ + + Y+G N P+D+C CG G G TC CG+ D R+ RR Sbjct: 465 AIQKVVEFAMKNNCNYFGINFPLDQCNACGHFGRI-----GDTCSSCGSSDILRL---RR 516 Query: 679 VCGYLGSPDARPFNAGKQEEVKRR 702 V GYL + R F GK+ E+ R Sbjct: 517 VSGYL--SEKRAFTKGKKRELNLR 538 >UniRef50_A5UN10 Anaerobic ribonucleoside-triphosphate reductase, NrdD n=5 Tax=Methanobacteriaceae RepID=A5UN10_METS3 Length = 776 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 174/648 (26%), Positives = 284/648 (43%), Gaps = 114/648 (17%) Query: 110 NASLLNENANKDSKVIPTQRDLLAGIVA----KHYARQHLLPRDVVQAHERGDIHYHDLD 165 N + L EN N+D+ + + + VA K YA +LP + AH GDIH HDL+ Sbjct: 182 NITSLIENGNRDNANMIHNPESIHKHVADEALKQYALLQMLPSHLADAHMSGDIHIHDLE 241 Query: 166 YSPFFPMFNCMLIDLKGMLTQGFKMG-----NAEIEPPKSISTATAVTAQIIAQVASHIY 220 + P+ NCM D++ + G K+ + P + T T +I+ ++ Sbjct: 242 FFAGRPL-NCMQHDIRTFIKYGLKVDGTGDHTSVAGAPNHMETLMNHTGEIMLASQQNMS 300 Query: 221 GGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNT 280 GG ++ + +APF A RT +E + Q L Y +N Sbjct: 301 GGQAMSLWNVFVAPF-----------------------ARGRTYEEIKQSVQMLIYNLNM 337 Query: 281 LHTANG-QTPFVTFGFGLG--------TSW---------------ESRLIQESILRNRIA 316 + A G Q PF + G T++ E+RLIQ++ +A Sbjct: 338 AYAARGSQVPFTSMVLEFGVPKFLQDVTAYGPKGQVVGTYGDFEEETRLIQKAFTETLLA 397 Query: 317 GLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTG 376 G + K +FP ++ +R+ KGD D+ L E ++K Y + + G Sbjct: 398 G-DQEGKPHLFPNTIYTLRE--ETLKGDYEEDL-HLVHELSAK--YGSSYFINMLPDYRG 451 Query: 377 SFKTPMGCRSFL-----GVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLL 431 MGCR+ L G WE + + G NL ++LNLPRI ++K DE+ ++ L Sbjct: 452 KMANYMGCRTCLQDNWTGDWEQDC---LRTG--NLAYVTLNLPRIGYQSK-DESQVFEYL 505 Query: 432 DERLVLARKALMTRIARLEGVKA----RVAPILYMEGACGVRLNADDDVSEIFKNGRASI 487 DE + LA + LM R R +G+K + P L + +D +N +++ Sbjct: 506 DEYMDLAAETLMLR--REQGLKCLNDFHILPFL--------KQKVGEDSYYRIQN--STL 553 Query: 488 SLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSE 547 S G++G++E + +LFG +++ G+ +E L + D+ KEETG +S+ TP+E Sbjct: 554 SFGFVGLNEMLLSLFG--KGIEDKDANKFGVKCIEYLNERADKLKEETGLRWSVLQTPAE 611 Query: 548 NLCDRFCRLDTAEFG---VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGG 604 + RF LD +FG +V G YYTNS H+ V V+ DKI E Y L GG Sbjct: 612 STAYRFATLDKEQFGDQAIVQGDGSANYYTNSSHVPVNTDVSLIDKIKIEEQYHSLTPGG 671 Query: 605 FICY---GEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFT 661 I + GE + +L +L + + ++ ++ + C C + KG Sbjct: 672 HIFHAFMGESYSDPDSLMSLTNKIA-KKSDIGFWAYSSALSFCLNC------KTLMKGLN 724 Query: 662 --CPKCGNHDASRVSVTRRVCGYL-----GSPDARPFNAGKQEEVKRR 702 CP CG ++ V R+ GY+ + +N GK++E+ R Sbjct: 725 NKCPTCG--ESEDVEWYDRITGYVQQVGRAKSSSGGWNPGKRQELIDR 770 >UniRef50_UPI0001C41C69 anaerobic ribonucleoside-triphosphate reductase NrdD n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41C69 Length = 780 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 163/646 (25%), Positives = 270/646 (41%), Gaps = 110/646 (17%) Query: 110 NASLLNENANKDSKVIPTQRDLLAGIVA----KHYARQHLLPRDVVQAHERGDIHYHDLD 165 N + L EN N+D+ + + + VA K YA HLLP + AH GDIH HDL+ Sbjct: 187 NITSLIENGNRDNANMMHNPESIHKYVADEALKQYALLHLLPSHLADAHMSGDIHIHDLE 246 Query: 166 YSPFFPMFNCMLIDLKGMLTQGFKMG-----NAEIEPPKSISTATAVTAQIIAQVASHIY 220 + P+ NC+ D++ + G K+ + PP + T T +I+ ++ Sbjct: 247 FFAGRPL-NCLQHDIRAFIKYGLKVDGTGDHTSVAAPPSHMETLMNHTGEIMLAAQQNMS 305 Query: 221 GGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNT 280 GG ++ + +APF A RT +E + Q L Y +N Sbjct: 306 GGQAMSLWNVFVAPF-----------------------ARGRTYEEVKQSIQMLVYNLNM 342 Query: 281 LHTANG-QTPFVTFGFGLG--------TSW---------------ESRLIQESILRNRIA 316 + A G Q PF + G T++ E+R+IQ + + Sbjct: 343 AYAARGSQVPFTSMQLEFGVPNFLKDVTAYGPKGQVVGTYADFEDETRMIQRAFTEILLE 402 Query: 317 GLGKNRKTAVFPKLVFAIR-DGLNHKKGDPNYDIKQLALECASK---RMYPDILNYDQVV 372 G + K +FP ++ +R + LN D + +L+ + S M PD Sbjct: 403 GDSEG-KPHLFPNTIYTLREETLNGDYDDDMLLVHELSAKYGSSYFVNMLPD-------- 453 Query: 373 KVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLD 432 G MGCR+ L + EQ NL ++LN+PRI ++ DE ++ LD Sbjct: 454 -YRGQMANYMGCRTCLQDTWTGDWEQDCLRTGNLAYVTLNMPRIGYQSN-DEDDVFEYLD 511 Query: 433 ERLVLARKALMTRIARLEGVKA----RVAPILYMEGACGVRLNADDDVSEIFKNGRASIS 488 + LA + LM R R +G+ + P L+ + D ++ +++S Sbjct: 512 NYMDLAVETLMIR--RKQGLNCLNNFDILPF----------LDQEVDGETYYRIQNSTLS 559 Query: 489 LGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSEN 548 G+ G++E + ALF + +N GI +E + +EETG +S+ TP+E+ Sbjct: 560 FGFCGLNEMLLALF--DEGIENPDANKFGIKCLEYINARAKALQEETGLRWSVLQTPAES 617 Query: 549 LCDRFCRLDTAEFG---VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGF 605 RF LD +FG ++ G YYTNS H+ V + DKI E Y L GG Sbjct: 618 TAYRFATLDKEQFGDKAILQGDNGANYYTNSSHVPVNSDIAFADKIKIEGQYHKLTPGGH 677 Query: 606 ICYGEYPNIQHNLKALEDVWDYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFT-- 661 I + + +AL + + + + ++ ++ C C + KG + Sbjct: 678 IFHAFMGESYSDPEALMSLTNKIARKSDIGFWAYSSAFSFCLNC------KTLMKGLSNK 731 Query: 662 CPKCGNHDASRVSVTRRVCGYL-----GSPDARPFNAGKQEEVKRR 702 CP CG +++ V R+ GY+ +NAGK++E+ R Sbjct: 732 CPSCG--ESADVEWYDRITGYVQQVGHAKSANGGWNAGKRQELIDR 775 >UniRef50_A4FZY4 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Methanococcales RepID=A4FZY4_METM5 Length = 791 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 172/715 (24%), Positives = 316/715 (44%), Gaps = 82/715 (11%) Query: 14 PFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSGP 73 PF E+I +A+++ A A D +A V +++ + +N + + ++++ Sbjct: 124 PFNKEKIVKALIQEAGA----DIKTAERIAVEVESEVK---NLTVNYLTAPMIREIVNT- 175 Query: 74 YKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLA 133 K + E+RH K RL + +V+ L E +KD+ + + + Sbjct: 176 -KLIEHGLEEFRH-------KHTRLGIPVYDIVK------LIERGSKDNANLMHNPESIH 221 Query: 134 GIVA----KHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFK 189 VA K +A ++ P+ + +H +GDIH HDL+Y+ + C DL+ G K Sbjct: 222 KWVADETMKQFALLNVFPKYIADSHMKGDIHLHDLEYAAVRTV--CCQHDLRNFFKHGLK 279 Query: 190 MG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA-SYNKH 243 + + +P K A A++++ + GG +I+ + LAP++ YN+ Sbjct: 280 VDGTGRHTSVSKPAKHPDVALQHAAKVLSAAQCEMSGGQSIDEFNIWLAPYMRGLDYNEV 339 Query: 244 RKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT---- 299 R+ + + + YA + F S+ E+ G+ + G +G Sbjct: 340 RQLMQLFIYEMNQIYA----ARGGQVVFSSINLELEVPEFLKGEDA-IKAGKVVGAYEEY 394 Query: 300 SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASK 359 +E +LI E+++ + G K +FP ++F +R+ + D N D+ E ++K Sbjct: 395 DYEVKLIAEALVDVLMDGDAYG-KPFLFPNVIFKLRE---NAFKDENKDLMIKIHELSAK 450 Query: 360 RMYPDILNYDQVVKVTGSFKTPMGCRSFL-GVWENENGEQIHDGRNNLGVISLNLPRIAL 418 P +N + MGCR+ L G W N + E+ N+ +LNLPRIA Sbjct: 451 WGLPYFIN--MLADYQYGNTNAMGCRTRLSGEWGN-SIEESSLRTGNMQWYTLNLPRIAY 507 Query: 419 EAKGDEATFWKLLDERLVLARKALMTR--IARLEGVKARVAPILYMEGACGVRLNADDDV 476 EA GD+ +++LDE+L LA+ AL + I++ V P L E D Sbjct: 508 EADGDDGRLFEILDEKLSLAKHALEIKHDISKRRLYHDNVLPFLTQEF----------DG 557 Query: 477 SEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETG 536 + ++ + + G++G++E + G E ++++ + A GI ++ +R+ D K+ETG Sbjct: 558 EQYYRYDSTTKTFGFVGLNELLKYHVGSE-LHESPEALAFGIKVISHIRKYADDLKKETG 616 Query: 537 YGFSLYSTPSENLCDRFCRLDTAEF-----GVVPG-VTDKG--YYTNSFHLDVEKKVNPY 588 +++ TP+E+ RF + D + VV G ++D YYTNS H+ V V Sbjct: 617 LRWTVTQTPAESTAGRFAKFDHKYYPEETKSVVNGDLSDLSSIYYTNSSHVKVNADVTLG 676 Query: 589 DKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVW-DYSYQHVPYYGTNTPIDECYEC 647 +K++ E + L NGG I + N + L D+ + + ++ + C +C Sbjct: 677 EKVNIEEKFHELCNGGHIGHFWNAEAYANPEVLMDITRKMTKTDIGFWTYTKNLSICEKC 736 Query: 648 GFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 + C CG+ + + S R+ GYL + +N KQ E+ R Sbjct: 737 SLA----MSGLKDNCTGCGSENVEKFS---RITGYL--QNVSNWNKAKQRELIDR 782 >UniRef50_UPI0001B41CA5 anaerobic ribonucleoside triphosphate reductase n=3 Tax=Listeria monocytogenes RepID=UPI0001B41CA5 Length = 180 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 78/171 (45%), Positives = 111/171 (64%), Gaps = 1/171 (0%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+KRDG K F +I+ A+ + KA ++D + + V ++ + + I+EIQ Sbjct: 11 VIKRDGRKASFDLIKIRNAVEASMKAINLEDETFLEEILLEVVSELPNKADMTIDEIQHC 70 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKV 124 VEN LM Y +ARAYIEYRHDRD ERE +++ + L+ Q + +++NENANKD+ V Sbjct: 71 VENTLMKSTYPDVARAYIEYRHDRDHERENITDMHKSVEKLL-QKDKTVVNENANKDATV 129 Query: 125 IPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 TQRDL AG VAK YA +++LP+ V AH +G+IH+HDLDYSP+ M NC Sbjct: 130 FNTQRDLTAGAVAKSYALKYMLPKHVSNAHLKGEIHFHDLDYSPYHAMTNC 180 >UniRef50_D1Z2H8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Euryarchaeota RepID=D1Z2H8_METPS Length = 791 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 180/711 (25%), Positives = 318/711 (44%), Gaps = 83/711 (11%) Query: 33 VDDADYCATVAAVVSEQMQGR-NQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIE 91 + +AD VA VS++++G+ ++ +N + + ++++ QL +E D + Sbjct: 124 IKEADLSREVAGHVSKEVEGKLRKLKVNYLTAPLIREIVT---VQLLEEGLE---DARSQ 177 Query: 92 REKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAG-IVAKHYARQHLLPRDV 150 + G ++ L+E + ENAN P AG + + Y +LPR + Sbjct: 178 YTRLGMPVYDVTQLIEHGS----RENANLHHN--PETIHKFAGDQILREYLLVKILPRHI 231 Query: 151 VQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKM---GN--AEIEPPKSISTAT 205 AH RGDIH HD DY P NC+ DL G ++ GN + PPK A Sbjct: 232 TDAHLRGDIHLHDADYFAIRP--NCLQHDLSWFFQNGLRVDGTGNHTSVAAPPKHAMVAA 289 Query: 206 AVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA-SYNKHRKTAEEWNIPDAEGYANSRTI 264 A+I+A +++ GG +++ + +APF T SY++ ++ A+ + Y Sbjct: 290 LHAAKILASSQTNMAGGQSLDNFNVFMAPFFTGMSYDEVKQVAQAFVYEMNMQYV----A 345 Query: 265 KECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSW----ESRLIQESILRNRIAGLGK 320 + F ++ E+ + G +GT E ++ E++L + G + Sbjct: 346 RGGQVVFSNVNIELTVPPFLRDEPAIGPKGKVVGTYGDFEDELQVFTEALLDVFLDGDAR 405 Query: 321 NRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALE-CASKRMYPDILNYDQVVKVTGSFK 379 K +FP + +RD DP L + SK P ILN + K Sbjct: 406 G-KPHLFPNTIVKVRDSAFK---DPKQQEMLLKVHYLFSKYGTPYILN--MLPKWQHGAV 459 Query: 380 TPMGCRSFL-GVWENENG------EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLD 432 MGCR+ L G W + G + G N+ +LNLPRIA+EA GD+ +++LD Sbjct: 460 NSMGCRTRLSGDWADRQGYTNPRYSTMRTG--NIHYNTLNLPRIAIEANGDDNKVFEILD 517 Query: 433 ERLVLARKALMTRIARLEG--VKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLG 490 +RL L R++L + +E ++ P L +G G D++ ++G Sbjct: 518 QRLDLIRESLEIKHELIERRLYDNKLLPFLTQKGQSGEDYYQFKDLTH---------TVG 568 Query: 491 YIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLC 550 ++G++E + G+ ++++ G+ +++ +R + E T + ++L +P+E+ Sbjct: 569 FVGLNE-FTKIHIGKGLHESRDAYDFGMDLIKYMRDWAEFRTEMTDWRWTLTQSPAESTS 627 Query: 551 DRFCRLDTAEFG---VVPGVTDKG--YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGF 605 RF +LD EFG +V G +KG YYTNS HL+V+ V +++ E + P+ NGG Sbjct: 628 GRFAKLDLREFGDRAIVKGDKEKGNVYYTNSSHLEVDADVPMFERARLEGEFHPVCNGGH 687 Query: 606 ICY---GE-YPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF- 660 I + GE PN + + E + + + + + C C S G Sbjct: 688 ITHLFLGEGTPNPEGLMSLTEKLCRNT--SMGLFDFTRDLTTCKACA------TVSGGLQ 739 Query: 661 -TCPKCGNHDASRVSVTRRVCGY---LGSPDARP--FNAGKQEEVKRRVKH 705 +CP CG A+ + R+ GY +GS ++ +N K E++ R ++ Sbjct: 740 KSCPNCGATGAA-LEYYSRITGYCQRIGSGESTTGGWNDAKVAELRDRRRY 789 >UniRef50_Q0W698 Anaerobic ribonucleoside-triphosphate reductase (Glycyl-dependent) n=2 Tax=Archaea RepID=Q0W698_UNCMA Length = 780 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 170/662 (25%), Positives = 293/662 (44%), Gaps = 90/662 (13%) Query: 92 REKRGRLN---QEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAG-IVAKHYARQHLLP 147 R K RL ++ L+EQ + ENAN P AG + + Y +LP Sbjct: 164 RSKYTRLGMPVHDVTHLIEQGS----KENANLHHN--PETIHKFAGDQILREYLLVQVLP 217 Query: 148 RDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMG-----NAEIEPPKSIS 202 + + AH RGDIH HD DY P NC+ DL G ++ + PPK Sbjct: 218 KHIADAHMRGDIHIHDADYFAVRP--NCLQHDLSWFFENGLRVDGTGKHTSVAAPPKHAM 275 Query: 203 TATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSR 262 A A+I+A +++ GG +++ + +APF T + K + + + +R Sbjct: 276 VAALHAAKILASSQTNMAGGQSLDNFNIFMAPFFTGMSREEVKQVAQAFVYEMNMQYVAR 335 Query: 263 TIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT--SWESRL--IQESILRNRIAG- 317 + F +++ E+ + G +GT ++ L +++L I G Sbjct: 336 GGQVV---FSNVDIELTIPKYLADKPAIGPKGKVMGTYKDYQDELYTFTDALLDVFIDGD 392 Query: 318 -LGKNRKTAVFPKLVFAIRDGL--NHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKV 374 LGK +FP ++ RD + ++ + + + QL SK P ILN + Sbjct: 393 ALGKPH---LFPNVIVKTRDSAFKDPQQKELLFKVHQLF----SKYGTPYILN--MLPDW 443 Query: 375 TGSFKTPMGCRSFL-GVWENENGEQ---IHDGRN-NLGVISLNLPRIALEAKGDEATFWK 429 MGCR+ L G W ++ G + + R N+ ++NLPRIALEA G++ ++ Sbjct: 444 QHDAVNSMGCRTRLSGDWADKQGYENPGMSTMRTGNIHYNTVNLPRIALEANGNDGKIFE 503 Query: 430 LLDERLVLARKALMTR--IARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASI 487 +LD RL L R+AL + + + + ++ P L +G G +D++ Sbjct: 504 ILDSRLDLIREALEIKHDLVKKRLYENQILPFLTQKGRHGEDYYRFEDLTH--------- 554 Query: 488 SLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSE 547 ++G++G++E + A G +++++ G+ ++ +R D + TG+ ++L TP+E Sbjct: 555 TVGFVGLNELVQA-HTGSMLHESQDAYDFGMDVIRYMRDWADSLSDITGWRWTLTQTPAE 613 Query: 548 NLCDRFCRLDTAEFG---VVPGVTDKG--YYTNSFHLDVEKKVNPYDKIDFEAPYPPLAN 602 + RF RLD FG +V G + G YYTNS H+ V+ ++ +D+ E + P+ N Sbjct: 614 STAGRFARLDMKAFGARALVHGDRNTGGVYYTNSSHMPVDADISLFDRAKMEGKFHPVCN 673 Query: 603 GGFICY---GEYPNIQHNLKALED---------VWDYSYQHVPYYGTNTPIDECYECGFT 650 GG I + GE L +L + ++DY+ + C +CG Sbjct: 674 GGHITHLFLGEGTPDPAGLMSLTEKLCRNTSMGLFDYTRD----------LTTCRKCGTV 723 Query: 651 GEFECTSKGFTCPKCGNHDASRVSVTRRVCGY---LGSPD-ARPFNAGKQEEVKRRVKHL 706 S CP C N + + R+ GY +GS D A +N K E++ R ++ Sbjct: 724 AGGLLNS----CPNC-NANGKDLEYYSRITGYCQRIGSGDSAGGWNDAKIAELRDRKRYC 778 Query: 707 GN 708 N Sbjct: 779 IN 780 >UniRef50_B8DLP5 Anaerobic ribonucleoside-triphosphate reductase n=15 Tax=Desulfovibrio RepID=B8DLP5_DESVM Length = 704 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 186/753 (24%), Positives = 289/753 (38%), Gaps = 123/753 (16%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 M H+ KRDG + +R+ AI +A KA+ + D +A V ++ G + + + Sbjct: 1 MPQHIRKRDGRVETWSVDRVGHAINKALKASGIKDPLLGKRLAQRVEAKLDGVDMPEQEQ 60 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASL------L 114 +Q V+ LM +A YI YR R RE R + N+ + + L + Sbjct: 61 VQDLVQRVLMEARLYAVAERYIIYREKR---REMRSQ-NEAYLDVARMIESYLDRSDWRV 116 Query: 115 NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFN 174 NEN+N + + A++ ++ P ++ AH G H HDL F Sbjct: 117 NENSNMGHSFQGLILHMAGSVQARYVLEKY--PEEIRLAHTHGYFHIHDLS---FGLAGY 171 Query: 175 CMLIDLKGMLTQGFKM-GNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLA 233 C L+ +L +GF + G P + A + + + G N ID LA Sbjct: 172 CAGWSLRDLLLEGFNLKGRCCASPARHFDAACGQIVNFLGTLQNEWAGAQAFNNIDTYLA 231 Query: 234 PFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTF 293 PF+ +H K T E Q L Y +NT GQ+PF F Sbjct: 232 PFI-----RHDKL----------------TYDEVKQGVQKLVYNLNTTSRWGGQSPFTNF 270 Query: 294 GFGLG----TSWESRLI----QESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDP 345 + + E +I Q+S + A + + A ++ DG P Sbjct: 271 TLDMAPPRHIANEPVIIGGQFQDSTYGDYAAEMDMFNR-AFIEVMLEGDADGRIFSFPIP 329 Query: 346 NY----------DIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE--N 393 Y D +L L +K P N+ ++ M CR + + E Sbjct: 330 TYNVTPDFPWDTDTGKLLLRMTAKYGAPYFQNFINSDLNPEDVRS-MCCRLQMDLREIRK 388 Query: 394 ENGEQIHDG--RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEG 451 G G ++GV++LNLP+ A A+G+E F ++ E +AR AL Sbjct: 389 RTGGLFGSGDLTGSIGVVTLNLPKFAYLAQGEE-DFLDMITEYAEMARDALE-------- 439 Query: 452 VKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNE 511 Y C L+A +F R + GY G TI L GG N Sbjct: 440 ---------YKRKLCTQMLDAG-----MFPFSRRYLKNGYAGHFSTI-GLIGGHEACLN- 483 Query: 512 QLRAKGIA----------IVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEF 561 L KGI ++ LR+ +++EETG+ ++L +TP E C R R+D A + Sbjct: 484 -LLGKGIETEAGLRLMKRVLHHLRELTVRFQEETGHMYNLEATPGEGTCYRLARIDRALY 542 Query: 562 -GVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYG--------EYP 612 + D YYTNS L V + + ++ + L NGG + + E Sbjct: 543 EDIATSGGDTPYYTNSTLLPVGFTEDVFAALEHQNELQTLYNGGTVFHSFLGEAAPDEAS 602 Query: 613 NIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASR 672 + LKA++ +PY C G+ + CP+CG Sbjct: 603 VKNYLLKAMQKT------RIPYISVTPTFSVCQSHGY-----LRGEHMNCPECG----EE 647 Query: 673 VSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 V RV GY P +R +N GKQ+E K RV++ Sbjct: 648 AEVYTRVVGYY-RPVSR-WNLGKQQEYKERVEY 678 >UniRef50_Q12U66 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12U66_METBU Length = 604 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 156/630 (24%), Positives = 259/630 (41%), Gaps = 100/630 (15%) Query: 113 LLNENANKDSKVIPTQRDL-LAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFP 171 LL ENAN ++ P+ D+ +A + K YA ++L ++V +AH +G+IH HDL +PF P Sbjct: 32 LLKENAN--TRFSPSVIDMHVASQIKKRYALENLYSKEVAKAHTKGNIHIHDLS-NPFKP 88 Query: 172 MFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEV 231 C ID + L G K ++ P K A + G I+ + + Sbjct: 89 Y--CNGIDARIFLLDGLKFPDSRSSPAKRFDAAIYHAMSFMLHSKHFFAGAQAIDMFNWL 146 Query: 232 LAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFV 291 LAP + H +E +E Q +++N + Q+ F Sbjct: 147 LAPHL------HYSDIDE---------------EELLQIVQGFMFQMNQSNRIGAQSAFT 185 Query: 292 TFGFGLGTSWESRLIQESILRNRIAGLGKN---RKTAVFPKLVFAIRDGLNHKKGDPNYD 348 G R+ S L N +A G + + F K AI + D Sbjct: 186 NIGL--------RINCPSSLANELAVYGGEFIEKTYSCFEKEARAIYGAFMDIAAKGDAD 237 Query: 349 IKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGV---WENENGEQI------ 399 + + DI D + K T + G FL + + EN Q Sbjct: 238 GLPFTFPLITTAITKDIDTEDTLWKRTMYATSSTGAPYFLNLTTDYLEENTTQAMCCRLL 297 Query: 400 --HDG----RNNLG-----VISLNLPRIALEAKGDEATFWKLLDERLVLARKALM--TRI 446 H G +G ++++NLPRIALEA+ + F+K LDE L + RKAL+ I Sbjct: 298 ARHSGGVWTAGGMGSGSNKIVTVNLPRIALEAENRD-RFFKRLDEILEITRKALLEGQEI 356 Query: 447 ARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEH 506 R + ++ P L L ++ F + ++ G +G++E + L G + Sbjct: 357 VRRSLYEWKILPWL---------LQRTENDLPYFDHSSRHLTFGTVGLNECLLNLTGQDM 407 Query: 507 VYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGV--- 563 + ++ G+ I+ + ++ + + G ++ TP+E+ R LD + +G Sbjct: 408 IEQHDL----GMEIIRHMLGKIETYSIQDGIEYTFEQTPAESTAHRLATLDRSAYGEKAH 463 Query: 564 VPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY---GE-YPNIQHNLK 619 V G D YYTNS H+ K++ ++I E+ + P GG I + GE +P+ + + Sbjct: 464 VQGSHDAAYYTNSTHVPYSSKISLAERIKIESRFHPYFTGGTISHIWMGESFPDPEGMSE 523 Query: 620 ALEDVWDYSYQHVPYYGTNTPIDECYECGFT-GEFECTSKGFT--CPKCGNHDASRVSVT 676 +E + S + Y+ C+ FT E S+G CP C VS Sbjct: 524 LIEKL---SGTDLAYF--------CFSPDFTVCENRHVSRGMNLKCPVCNEPAVDHVS-- 570 Query: 677 RRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 RV GY G +N GKQ+E + R +++ Sbjct: 571 -RVTGYFGH--VEQWNPGKQKEYEERHRYI 597 >UniRef50_A6TN19 Anaerobic ribonucleoside-triphosphate reductase n=23 Tax=cellular organisms RepID=A6TN19_ALKMQ Length = 710 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 178/740 (24%), Positives = 301/740 (40%), Gaps = 100/740 (13%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDD---ADYCATVAAVVSEQMQGRNQVDINEI 61 V KR+G V F + +IKEAI AAK+ D A + +A + + N + +I Sbjct: 6 VQKRNGEIVDFDAIKIKEAIFSAAKSVGGKDEMTASRLSKLAVDIVSETYAANIPSVEDI 65 Query: 62 QTAVENQLMSGPYKQLARAYIEYRH-DRDIEREKRGRLNQEIRGLVEQ---TNASLLNEN 117 Q VE L+ + + A++YI YR +DI K ++ E+ +VE+ +NEN Sbjct: 66 QDIVEKVLIEEGHAKTAKSYILYRKKQKDIREVKNLFMDAEV--MVEEYVNLEDWRVNEN 123 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDY-SPFFPMFNCM 176 AN + ++ I K++ + + +++ AH +GD+H HDL +P+ C Sbjct: 124 ANMGFSLQGLNNHIVESITKKYWLNK-IYTKELRDAHIQGDLHIHDLGLLAPY-----CC 177 Query: 177 LIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 234 DL+ L GFK G E +PPK +A ++ + G ++ ID LAP Sbjct: 178 GWDLEAFLKDGFKGAKGKVESKPPKHFESALGQLVNLLYTLQGEAAGAQAVSSIDTYLAP 237 Query: 235 FVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFG 294 F+ Y + + ++ A Q + +N QTPF Sbjct: 238 FI---------------------YYDKMSYEQVKKAIQRFVFNLNVPTRVGFQTPFTNVT 276 Query: 295 FGLGTSWESRLIQESIL--RNRIAGLGKNRKTAVFPKLVF--AIRDG------------- 337 + T E Q I+ N G+ +K + F + +G Sbjct: 277 LDI-TPHELLKKQRVIIGGENMDKNYGEFQKEMDLFNMAFCEVMMEGDGAGRAFSFPIPT 335 Query: 338 LNHKKGDP-NYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENG 396 +N K P + ++ +E K P N+ S P RS +N Sbjct: 336 VNITKDFPWDTEVVNAIMEMTRKFGTPYFANF------INSDMAPEDIRSMCCRLRLDNR 389 Query: 397 EQIHDG---------RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 E G ++ V++LN+ RI +K E F + E + A++ + Sbjct: 390 ELRKRGGGLFGANPLTGSINVVTLNMARIGYTSKNMEE-FKSKVRELMQNAKQICEDKRV 448 Query: 448 RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHV 507 LE + LY +R + E FKN ++I L G++E L G + Sbjct: 449 ILE---QYMDVGLYPYSRYYLR-DVKSATGEYFKNHFSTIGLN--GMNEACLNLLGVD-- 500 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG-VVPG 566 E+ + I+E + + + ++EETG ++L ++P+E RF RLD + ++ Sbjct: 501 ITTEEGNEFAVEIMEFMNRVIQIFQEETGSLWNLEASPAEGAAYRFARLDKKIYPRIITQ 560 Query: 567 VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYG----EYPNIQHNLKALE 622 T++ YYTNS L V + ++ ++ + L GG + +G E +++ L+ Sbjct: 561 GTEEPYYTNSTQLPVNHTKDIFEAVELQEKLQSLYTGGTVLHGFIGEEIESVETCKMLLK 620 Query: 623 DVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY 682 V + S +PY C E G+ + + F CP CG V RV G+ Sbjct: 621 RVMENS--EIPYITITPTFSICQEHGY-----LSGEHFECPHCGKES----EVWTRVVGF 669 Query: 683 LGSPDARPFNAGKQEEVKRR 702 + +N GK+EE K R Sbjct: 670 --HRPVQAWNPGKKEEYKDR 687 >UniRef50_B3QGB6 Anaerobic ribonucleoside-triphosphate reductase n=5 Tax=Bacteria RepID=B3QGB6_RHOPT Length = 673 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 170/721 (23%), Positives = 284/721 (39%), Gaps = 113/721 (15%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKA----AEVDDADYCATVAAVVSEQMQGRNQVDINE 60 ++KR G + F S +I+ AI RA +A E++ + V++ + G I + Sbjct: 13 IIKRSGAEAAFASAKIRSAIARAGQATGEFGELEAGLLTSQSVKVIAHRFAGAVP-QIEQ 71 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQ VE L+S + ARAYI YR R R R I + E + + NAN Sbjct: 72 IQDIVEQVLISANHLTTARAYIVYREKRSQARNDRKVAVDAIASINEYLDRTDWRVNANA 131 Query: 121 DSKVIPTQRDL-LAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 + L L+G V +Y H+ P +V +AH GD+H HDLD + C Sbjct: 132 NQGYSLGGLILNLSGKVVANYWLSHVYPPEVGRAHRDGDLHIHDLDMLSGY----CAGWS 187 Query: 180 LKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 L+ +LT+G G E PPK +S+A + + + G + D LAPF+ Sbjct: 188 LRMLLTEGLNGVPGKVEASPPKHLSSAIGQIVNFLGTLQNEWAGAQAFSSFDTYLAPFL- 246 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGL 297 RK D YA + Q L Y +N QTPF F Sbjct: 247 ------RK--------DGLSYA------DVLQGIQELVYNLNVPSRWGTQTPFTNLTF-- 284 Query: 298 GTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNH------KKGDPNYDIKQ 351 W LR+ + +G + +L + D +N KGD + Sbjct: 285 --DWTC----PEDLRDEVPVIGGEEMDFTYGELQPEM-DMINRAYMEVMTKGDAKGRV-- 335 Query: 352 LALECASKRMYPDIL----NYDQVVKVTGSFKTP-----------------MGCRSFLGV 390 + + PD N +++ ++T + P M CR L + Sbjct: 336 FTFPIPTYNITPDFPWESENAERLFEMTAKYGLPYFQNFLNSELKPHMIRSMCCRLQLDL 395 Query: 391 WE-NENGEQIH---DGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRI 446 E + G + + ++GV+++N R+ +GDEA + LD L +AR +L Sbjct: 396 TELLKRGNGLFGSAEQTGSIGVVTINCARLGHRHRGDEAGLLRALDTLLDIARTSLE--- 452 Query: 447 ARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASI-----SLGYIGIHETINAL 501 +K +V V+ DD + K ++ ++G G++E I Sbjct: 453 -----IKRKV-----------VQRYMDDGLFPYSKRYLGTLRNHFSTVGINGVNEMIRNF 496 Query: 502 FGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEF 561 + +++ +R + ++E+TG ++L +TP+E RF + D F Sbjct: 497 TADCETIATPWGHGFAVRVLDHVRARIVAFQEQTGNLYNLEATPAEGTTYRFAKEDRKRF 556 Query: 562 -GVV-PGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLK 619 G++ G D YYTNS L V +P++ ++ + GG + + + + + Sbjct: 557 PGILQAGTEDNPYYTNSSQLPVGFTDDPFEALERQDDLQRKYTGGTVLHLYMGSKLSSGE 616 Query: 620 ALEDVWDYSYQH--VPYYGTNTPIDECYECGFT-GEFECTSKGFTCPKCGNHDASRVSVT 676 A + + + ++ +PY C G+ GE CPKC DA R++ Sbjct: 617 ACKKLVRRALENFRLPYVTVTPTFSICPTHGYIEGEHAF------CPKC---DAERLAAK 667 Query: 677 R 677 R Sbjct: 668 R 668 >UniRef50_C6BJE1 Anaerobic ribonucleoside-triphosphate reductase n=20 Tax=Bacteria RepID=C6BJE1_RALP1 Length = 687 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 156/622 (25%), Positives = 251/622 (40%), Gaps = 76/622 (12%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 +T V KRDG PF +++I++AI A +A D + + V + I Sbjct: 6 VTGQVTKRDGSLAPFDAQKIRQAIAAAGQATGEFDTIEAQHLTSGVVAHLAPLPCPGIEI 65 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLL------ 114 IQ VE L+ Y + ARAYI YR E+ R R + VE T L Sbjct: 66 IQNCVEEVLVDAGYWRTARAYIVYR-----EQHARLRSLKHTLVDVESTMEEYLEQRDWR 120 Query: 115 -NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMF 173 N NAN+ + ++ AG V +Y H+ + AH GD+H HDLD + Sbjct: 121 VNANANQGYSLGGLILNV-AGKVTANYWLSHVYSPEAGTAHREGDLHIHDLDMLSGY--- 176 Query: 174 NCMLIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEV 231 C L+ +LT+GF G E PP+ +S A + + + G + D Sbjct: 177 -CAGWSLRQLLTEGFNGVPGKVEATPPRHMSAAIGQIVNFLGTLQNEWAGAQAFSSFDTY 235 Query: 232 LAPFV---TASYNKHRKTAEEW----NIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA 284 +APF+ SY +++ +E N+P G F +L ++ Sbjct: 236 MAPFIRRDAMSYAAVKQSMQELIYNLNVPSRWGTQTP---------FTNLTFDWTCPADL 286 Query: 285 NGQTPFV-----TFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLN 339 Q P++ F +G E +I + + +AG K+R FP + I + Sbjct: 287 REQVPYIGGEEMPFTYG-DLQPEMDMINRAYIEVMMAGDAKDR-AFTFPIPTYNITSDFD 344 Query: 340 HKKGDPNYDIKQLALECASKRMYP---DILNYDQVVKVTGSF--KTPMGCRSFLGVWENE 394 + PN L E ++ P + LN D + S + + R L Sbjct: 345 WEH--PN---TTLLFEMTARYGLPYFQNFLNSDLEPHMVRSMCCRLQLDLRELLKRGNGL 399 Query: 395 NGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTR---IARLEG 451 G G ++GV+++N R+ GDEA LD L L R L + + RL Sbjct: 400 FGSAEQTG--SIGVVTVNCARLGYLYAGDEAALLARLDTLLALGRDVLEVKRKFVQRL-- 455 Query: 452 VKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNE 511 + + P Y G N S + NG + + + I FG Sbjct: 456 IDQGLYP--YTRRYLGTLRN---HFSTLGVNGINEMVRNFTHDADDITTPFG-------- 502 Query: 512 QLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEF-GVV-PGVTD 569 A + +++ +RQ + +++E TG+ ++L +TP+E RF R D + G++ G T Sbjct: 503 --HAMAVRLLDHVRQRMTEFQEATGHLYNLEATPAEGTTYRFAREDRKRWPGILQAGTTA 560 Query: 570 KGYYTNSFHLDVEKKVNPYDKI 591 + YYTNS L V +P++ + Sbjct: 561 QPYYTNSSQLPVGYTDDPFEAL 582 >UniRef50_A9KI88 Anaerobic ribonucleoside-triphosphate reductase n=81 Tax=Bacteria RepID=A9KI88_CLOPH Length = 800 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 172/755 (22%), Positives = 302/755 (40%), Gaps = 126/755 (16%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAE-VDDADYCATVAAVVSEQMQGR---NQVDINE 60 V+KRDG F +I AI +A A + + + D ++ V+ Q + + V + + Sbjct: 4 VVKRDGEIAEFALSKISSAIAKAFNATQKLYNEDIINLLSLRVTSDFQTKLKDSTVTVED 63 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRL--NQEIRGLVEQTNASLLNENA 118 IQ +VE+ L Y +A+AYI YR +R+ R + + +EI + + + EN Sbjct: 64 IQDSVEHVLEQSGYTDVAKAYILYRKNREKIRNMKSTILDYKEIVDMYVKEEDWRVKEN- 122 Query: 119 NKDSKVIPTQRDLL---AGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 S V + L+ +G + +Y + ++ AH DIH HDL + C Sbjct: 123 ---STVTYSVGGLILHNSGAITANYWLSEIYDEEIANAHRSADIHIHDLSMLTGY----C 175 Query: 176 MLIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLA 233 LK ++ +G G P K +ST + + + G + D LA Sbjct: 176 AGWSLKQLIKEGLGGIPGKITSSPAKHLSTLCNQMVNFLGIMQNEWAGAQAFSSFDTYLA 235 Query: 234 PFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF--V 291 PFV N+ E +K+C Q Y VNT Q PF + Sbjct: 236 PFVKVD-----------NLSYEE-------VKQC---IQCFIYGVNTPSRWGTQAPFSNI 274 Query: 292 TFGFGLGTSW---------------------ESRLIQESILRNRIAGLGKNRKTAVFPKL 330 T + + E L+ ++ + I G N + +P Sbjct: 275 TLDWTVPNDLAELPCIVGGKEMEFKYKDCKKEMDLVNKAFIEIMIEG-DANGRGFQYPIP 333 Query: 331 VFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFL-- 388 ++I + + N +L E +K P NY S P RS Sbjct: 334 TYSITKDFDWSDTENN----RLLFEMTAKYGTPYFSNY------INSDMEPSDVRSMCCR 383 Query: 389 -----GVWENENGEQIHDGRN--NLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKA 441 + G G + ++GV+++N+PRIA +EA F++ LD + ++ ++ Sbjct: 384 LRLDLRELRKKTGGFFGSGESTGSVGVVTINMPRIAY-VSANEAEFYQRLDRMMDISARS 442 Query: 442 LMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHET-INA 500 L VK +V L EG F N ++I G IG++E +NA Sbjct: 443 L--------KVKRKVITKLLEEGLYPYT----KRYLGTFDNHFSTI--GLIGMNEVGLNA 488 Query: 501 LFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAE 560 + G+ + D ++ + + ++ +R + ++ E G ++L +TP+E+ R + D Sbjct: 489 RWLGKDMTD-KKTQQFSVEVLNHMRDRLGDYQVEFGDLYNLEATPAESTSYRLAKHDRKR 547 Query: 561 FGVVPGVTDKG---YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYG----EYPN 613 + + +G YYTNS HL VE + + +D + L G + + + P+ Sbjct: 548 WSEIRTAGKEGDTPYYTNSSHLPVEYTDDIFSALDVQDQLQTLYTSGTVFHAFLGEKLPD 607 Query: 614 IQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRV 673 + K + + + +Y+ +PYY + C G+ + F CP+CG + Sbjct: 608 WEAAAKLVRTISE-NYK-LPYYTMSPTYSICKNHGY-----IKGESFVCPECG----EKA 656 Query: 674 SVTRRVCGYLGSPDARP---FNAGKQEEVKRRVKH 705 V R+ GY RP +N GK +E K R+++ Sbjct: 657 EVYSRITGYY-----RPVQNWNEGKSQEYKNRIEY 686 >UniRef50_C7N7G2 Anaerobic ribonucleoside-triphosphate reductase n=49 Tax=cellular organisms RepID=C7N7G2_SLAHD Length = 816 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 175/765 (22%), Positives = 309/765 (40%), Gaps = 132/765 (17%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR-------NQV 56 V+KRDG V F ++I AI +A A + Y +V +++ + +++ Sbjct: 3 QVVKRDGKIVDFSIDKISVAITKAFDAL---NKQYHPSVIELIALHVTSDFEDKIVDDKI 59 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASL-LN 115 + +IQ +VE L Y +A+AYI YR +REK +N + + + L +N Sbjct: 60 TVEDIQDSVEKVLSESGYADVAKAYILYRR----QREKVRNVNSALLNYKDLVDNYLKIN 115 Query: 116 ENANKDSKVIPTQRDLL----AGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFP 171 + K++ + L +G + +Y + ++ +AH IH HDL + Sbjct: 116 DWRVKENSTVTYSVGGLILSNSGAITANYWLSEVYDDEIAEAHRSAAIHLHDLSMLTGY- 174 Query: 172 MFNCMLIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 C LK ++ +G G P +ST + + + G + D Sbjct: 175 ---CAGWSLKQLIQEGLGGVPGKITSSPASHLSTLCNQMVNFLGIMQNEWAGAQAFSSFD 231 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTP 289 LAPFV N+ E +K+C QS Y VNT Q P Sbjct: 232 TYLAPFVKVD-----------NLSQKE-------VKQC---IQSFIYGVNTPSRWGTQAP 270 Query: 290 F------------------------VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTA 325 F + F +G E ++ ++ + I G N + Sbjct: 271 FSNITLDWTVPNDLKNLNAIVGGKEMDFTYG-ECQHEMDMVNKAFIDIMIEG-DANGRGF 328 Query: 326 VFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCR 385 +P ++I N + + N +L E +K P NY S P R Sbjct: 329 QYPIPTYSITRDFNWDETENN----KLLFEMTAKYGTPYFSNY------INSDMEPSDVR 378 Query: 386 SFL-------GVWENENGEQIHDGRN--NLGVISLNLPRIALEAKGDEATFWKLLDERLV 436 S ++G G + ++GV+++NLPRIA A DEA F+ LD + Sbjct: 379 SMCCRLRLDLRELRKKSGGFFGSGESTGSIGVVTINLPRIAYLAT-DEADFYARLDHLMD 437 Query: 437 LARKALMTRIARLEGVKAR-VAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIH 495 +A ++L T+ A + + + + P Y + G F+N ++I G IG++ Sbjct: 438 VAARSLKTKRAVITTLLDKGLYP--YTKRYLGT-----------FENHFSTI--GLIGMN 482 Query: 496 ET-INALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFC 554 E +NA + + D E+++ ++ +R + ++E G ++L +TP+E+ RF Sbjct: 483 EVGLNANWLRADLTD-ERVQRFARDVLNHMRNRLSDYQEMYGDLYNLEATPAESTTYRFA 541 Query: 555 RLDTAEFG--VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYP 612 + D ++ + + YYTNS HL V + + +D + L G + + Sbjct: 542 KHDKEKYPDIITANMNGTPYYTNSSHLPVGYTEDVFSALDIQDDLQTLYTSGTVFHAFLG 601 Query: 613 NIQHNLKALEDVWDYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDA 670 + KA ++ ++ +PYY + C + G+ T + FTCP CG Sbjct: 602 EKLPDWKAAANLVRKIAENYKLPYYTMSPTYSVCKDHGY-----LTGEQFTCPHCG---- 652 Query: 671 SRVSVTRRVCGYLGSPDARP---FNAGKQEEVK-RRVKHLGNGQI 711 ++ V R+ GY RP +N GK +E K R+V ++G+ + Sbjct: 653 AKTEVYSRITGYY-----RPVQNWNDGKAQEYKDRKVYNIGHSTL 692 >UniRef50_D1SNH7 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SNH7_9EURY Length = 937 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 118/430 (27%), Positives = 199/430 (46%), Gaps = 43/430 (10%) Query: 289 PFVTFGFGLGT----SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRD-GLNHKKG 343 P V G GT E++LI E+++ + G K +FP + +R+ + Sbjct: 530 PAVMAGTTRGTYGDYEEEAKLILEALVDVMMEGDAMG-KPFLFPNFIIKLRENAFRDENK 588 Query: 344 DPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFL-GVWENENGEQIHDG 402 + Y I QL+ +K P +N +VT + MGCR+ L G W + +I Sbjct: 589 ELMYKIHQLS----AKFGIPYFINMLPDWQVTNT--NAMGCRTRLSGNWTGD--AEIDTL 640 Query: 403 RN-NLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILY 461 R N+ SLNLPRIA EA GD+ +++L ERL L ++AL+ + E K R LY Sbjct: 641 RTGNMQWYSLNLPRIAYEANGDDDKLFEILHERLELVKEALLI---KHEVTKER----LY 693 Query: 462 MEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIV 521 ++ L + D ++ + + G++G++E + GE +++++ G I+ Sbjct: 694 VDNLMPF-LTQEFDGESYYRYEHTTKTFGFVGLNEMLKYHL-GEELHESKDAVKFGEKII 751 Query: 522 ERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEF-----GVVPG---VTDKGYY 573 +R+ D+ KEETG +++ TP+E+ R RLD + VV G D YY Sbjct: 752 GYIREYADKLKEETGLRWTVTQTPAESCAGRMARLDYKYYKEETISVVRGDLNDVDSLYY 811 Query: 574 TNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVW-DYSYQHV 632 TNS H+ V+ + +K+ E + PL NGG I + + L D+ + + Sbjct: 812 TNSSHVRVDAPITLGEKVRIEEKFHPLCNGGHIMHVWNIESAADPDVLMDITKKITKTDI 871 Query: 633 PYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFN 692 ++ + C +CG + C CG+ D ++ S R+ GYL + +N Sbjct: 872 GFWTYTKNLSVCNKCGLS----MGGLRDRCINCGSEDIAKFS---RITGYL--QNISNWN 922 Query: 693 AGKQEEVKRR 702 KQ+E++ R Sbjct: 923 KAKQKELEDR 932 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 26/241 (10%) Query: 14 PFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSGP 73 PF E+I +A++R A D + +A V +++ ++ + + + ++++ Sbjct: 101 PFDKEKIVKALIRETGA----DKETAQKIADEVERELK---KLKVKYLTAPMIREIVN-- 151 Query: 74 YKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLA 133 YK + + E RH K RL + + + + ENAN + +A Sbjct: 152 YKLIEYGFEELRH-------KHTRLGMPVYDITKLIKSGS-RENANLMYNPESIHK-WVA 202 Query: 134 GIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNA 193 K YA + P+ + AH +GDIH HDL+Y+ P+ C+ DL+ G K+ Sbjct: 203 DETMKQYALLAIFPKHIADAHLKGDIHLHDLEYAATRPV--CLQHDLRPFFMYGLKVDGT 260 Query: 194 EI-----EPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA-SYNKHRKTA 247 + +P K A A+++ +++ GG +I+ + LAP+V SY K ++ Sbjct: 261 GLHTSVSKPAKHPEVAIQHAAKVMMAAQTNMSGGQSIDEFNVWLAPYVRGLSYEKIKQLM 320 Query: 248 E 248 + Sbjct: 321 Q 321 >UniRef50_Q8TWY0 Oxygen-sensitive ribonucleoside-triphosphate reductase n=1 Tax=Methanopyrus kandleri RepID=Q8TWY0_METKA Length = 591 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 154/618 (24%), Positives = 263/618 (42%), Gaps = 77/618 (12%) Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPR----DVVQAHERGDIHYHDLDYSPFFPMFNC 175 +++ ++PT ++++ I + ++H L +AH G IH HDLDY+ NC Sbjct: 17 RNANMLPTP-EVISKIFQDRWQKRHFLKHVLDGKTARAHLEGYIHIHDLDYA--LTRSNC 73 Query: 176 MLIDLKGMLTQGFKMGN------AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 D + +L G N +P K A + + + GG + ++ Sbjct: 74 CQHDCRWVLKYGLYARNPIGRLTCVSKPAKHAEVAVLHILKWLMTSQNFFAGGQGQDFVN 133 Query: 230 EVLAPFVTA---SYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANG 286 ++AP++ SY + R+ A+ I E + AF ++ E+ Sbjct: 134 FLVAPYIAEEGLSYEEIRQLAQ---IMMFEA-TQDLVARGGQPAFTNVNLELTCPDFLED 189 Query: 287 QTPFVTFGFGLGT----SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKK 342 + G +GT E+ + ++L ++ G FP+++ +R Sbjct: 190 EPAVGPGGEIVGTYGDFEEEAIMFARALLDVQLEGDAAGAPLK-FPQIIVKVR------- 241 Query: 343 GDPNYDIK--QLALECASKR---MYPDILNYDQVVKVTGSFKTPMGCRSFL-----GVWE 392 P YD + +LA E A++ + ++LN D K+ G MGCR+ L G WE Sbjct: 242 --PGYDKETLELAFEVAAENGAVYFANMLNRDWR-KLVGDNVNYMGCRTCLATNWTGDWE 298 Query: 393 NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGV 452 + I G N ++LNLP +A E++ DE F + + E +AR+AL+ AR V Sbjct: 299 IDT---IRTG--NFEYVTLNLPLLAHESR-DEDEFLEKIREYCEVAREALL---ARWRCV 349 Query: 453 KARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQ 512 K + LY C R D + F+ + SLG++G+ E I L G D Sbjct: 350 KKCLEAGLY--DGCQ-RWKPDGEY--YFRYEHTTWSLGFVGLAEAIEVLTGYGFWEDPSA 404 Query: 513 LRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCR--LDTAEFGVVPGVTDK 570 +R ++E L +++ E G +S+ +P+E+ +R R L+ V G + Sbjct: 405 MRLAE-RVLEELNDVREEFHERDGRRWSVVQSPAESAAERLARKYLEKYPDAKVRGTEHR 463 Query: 571 GYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY---GEYPNIQHNLKALEDVWDY 627 Y TNS H+ ++ VN ++ + EA + P+ GG I + GE + + +K V Sbjct: 464 PYLTNSCHVPYDEDVNVVERAEIEAKFHPMTLGGHITHFWLGERTDPRSLMKLTVRV--L 521 Query: 628 SYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPD 687 + + C C T E CP+CG R ++ RV GYL D Sbjct: 522 RRNTIGFLAITRDYSVCDRCQRTYEGVVEQ----CPECGR----RCTIWSRVTGYLAPVD 573 Query: 688 ARPFNAGKQEEVKRRVKH 705 + F GK++E K R++H Sbjct: 574 S--FVDGKKQEHKERLRH 589 >UniRef50_B3E035 Ribonucleotide reductase of class III (Anaerobic), large subunit n=3 Tax=cellular organisms RepID=B3E035_METI4 Length = 611 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 155/606 (25%), Positives = 243/606 (40%), Gaps = 84/606 (13%) Query: 132 LAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFK-- 189 L+ ++K Y Q + P +V +A ERGD H H+L + CM DL L +GF Sbjct: 44 LSSKISKSYWLQKIYPPEVKEAFERGDFHIHNLQVLGVY----CMGWDLADFLAKGFMGV 99 Query: 190 MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAE- 248 G E PP STA + G + D +LAPF+ K ++ + Sbjct: 100 EGRMESGPPLHFSTALNQVVNFFYTLQGEAAGAQAFSNFDTLLAPFIRYDNLKEKEIRQL 159 Query: 249 ------EWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFV-------TFG- 294 N+P G+ F +L ++N H + + T+G Sbjct: 160 LQQFLFNLNVPTRVGFQ---------APFTNLTLDLNPPHFLQNEAVLIGGKIKKETYGE 210 Query: 295 FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLAL 354 F +RL E L G + FP + I K P D Sbjct: 211 FQPEIDILNRLFCEVFLEGDARG-----RVFTFPIPTYNITSQFPWK--GPAADALWKMT 263 Query: 355 ECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNL----GVIS 410 + + +N D V S M CR L + + G N L GV++ Sbjct: 264 AKYGIPYFANFINSDLKVDDVRS----MCCRLRLDLTQLLRRGGGLFGSNPLTGSIGVVT 319 Query: 411 LNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKAR-VAPI--LYMEGACG 467 +NLPRI +K EA F + L E + LA+KAL + LEG A+ + P Y++G Sbjct: 320 INLPRIGFLSK-SEAEFLERLQELMELAKKALEAKRKALEGWIAKGLYPYSKFYLKGVYQ 378 Query: 468 VRLNADDDVSEIFKNGRASISLGYIGIHET-INALFGGEHVYDNEQLRAKGIAIVERLRQ 526 R A + N ++I G IG++E +N F G+ + D E +A I +++ LR Sbjct: 379 -RFGA------YWANHFSTI--GIIGMNEACLN--FMGKSIADPEG-KAFAIKVLDTLRG 426 Query: 527 AVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG-------YYTNSFHL 579 + +++ET ++L +TP+E R R+D A F + ++ +YTNS L Sbjct: 427 TLLAFQKETQNNYNLEATPAEATSYRLARIDKAMFPAIRVANEEAVKKGAAPFYTNSTQL 486 Query: 580 DVEKKVNPYDKIDFEAPYPPLANGGFICY---GEYPNIQHNLKALEDVWDYSYQHVPYYG 636 V +P+ ++ + GG + + G+ + ++ Y+ +PY+ Sbjct: 487 PVHFTTDPFVALEHQEELQSRYTGGTVLHFFLGQKIDEPQSIPPFVQAVCSKYK-IPYFT 545 Query: 637 TNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQ 696 C E G+ + + CP+CG V RV GYL D +N GKQ Sbjct: 546 LTPTFSICPEHGY-----LSGEQSRCPRCGKP----CEVYSRVVGYLRPLDQ--WNPGKQ 594 Query: 697 EEVKRR 702 EE K R Sbjct: 595 EEFKLR 600 >UniRef50_B3EQU4 Anaerobic ribonucleoside-triphosphate reductase n=16 Tax=cellular organisms RepID=B3EQU4_CHLPB Length = 730 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 174/759 (22%), Positives = 301/759 (39%), Gaps = 128/759 (16%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVD---INEI 61 ++KRDG V F E+I A+ RA +A D Y A ++A V ++ + + + EI Sbjct: 13 IIKRDGKVVSFNREKITFALFRALRATGNPDRQYAAELSAQVVASLEAKRAKEPPSVEEI 72 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASL------LN 115 Q VE L A+AYI YR RE + EI ++ + L + Sbjct: 73 QDVVEKVLFENCAFDAAKAYIIYRFQHGNMREAK-----EIFANIDLVDDYLHLKDWRVK 127 Query: 116 ENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 ENAN S + ++ IV+ Y L P ++ +AH++G IH HDL + C Sbjct: 128 ENANL-SYSLQGLNHHISSIVSSQYWLNELYPAEIAEAHKQGRIHIHDLGSLSVY----C 182 Query: 176 MLIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLA 233 + DL+ +LT GF+ + P K + +A + G + D LA Sbjct: 183 VGWDLEDLLTSGFRGVQQQSTSAPAKHLRSALGQIVNFFYTMQGEAAGAQAFSGFDTWLA 242 Query: 234 PFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTF 293 PF+ Y+K YA +K+C Q + +N QTPF Sbjct: 243 PFI--RYDKLE-------------YAE---VKQC---LQEFFFNMNVPTRVGFQTPF--- 278 Query: 294 GFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK------KGDPNY 347 T+ L+ + +R+R +G + A++ + D N +GD N Sbjct: 279 -----TNVTLDLLIPAPMRSRQVIIGGEPQDALYGDFQDEM-DMFNRAFAEVMLEGDANG 332 Query: 348 DIKQLALECASKRMYPDI----LNYDQVVKVTGSFKTP-----------------MGCRS 386 + + + + PD Y + ++T + P M CR Sbjct: 333 SV--FSFPIPTYNITPDFDWENPVYSDIWEMTAKYGIPYFSNFVNSDMNPDDVRSMCCRL 390 Query: 387 FLGVWENEN------GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARK 440 L E ++ G G ++GV+++NLP + A +E F++ L + +A+ Sbjct: 391 RLDKRELQSRGGGLFGSDPLTG--SIGVVTVNLPELGYLADSEE-EFFQRLSRVMEVAKS 447 Query: 441 ALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINA 500 +L + +E + + LY + +R N + + N +++ G +G++E Sbjct: 448 SLEVKRKVIERLTEQN---LYPYSSYYLR-NLYRKNGKYWANHFSTV--GLLGMNECCLN 501 Query: 501 LFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAE 560 G + Q R + +++ +R + ++EETG+ ++L +TP+E R R++ A+ Sbjct: 502 FMGCS--IGDAQGRLFSLKVLDFMRDRLVAFQEETGHIYNLEATPAEGTSYRLARMNRAK 559 Query: 561 FGVVPGVTDKG-------YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGG-----FICY 608 + + D+ YYTNS L V + ++ + + GG F+ Sbjct: 560 YPDIIVANDRASRNGAEPYYTNSSQLPVNYTDDLFEALRLQDEMQIRYTGGTVFHAFLGE 619 Query: 609 GEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGF-TGEFECTSKGFTCPKCGN 667 P + + ++ +PY + C G+ GE CP C + Sbjct: 620 ENLPAVSARQLVRKITANF---RLPYVTLSPTFSICPSHGYLAGEHR------ECPVCRD 670 Query: 668 HDA-SRVSVTRRVCGYLGSPDARP---FNAGKQEEVKRR 702 S V R+ GYL RP +NAGKQ E R Sbjct: 671 EGGKSSCLVFSRIVGYL-----RPVEQWNAGKQSEFHDR 704 >UniRef50_D1B9B6 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9B6_THEAS Length = 709 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 161/714 (22%), Positives = 295/714 (41%), Gaps = 85/714 (11%) Query: 19 RIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDINEIQTAVENQLMS-GPYK 75 RIK A++ A+ D + A++A+ V + + GR++V I+ V +L G Sbjct: 49 RIKNALILEAQV----DPEVAASIASEVEDDIVRYGRDRVTTRLIREMVNVKLFQRGLDA 104 Query: 76 QLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGI 135 +LA + + G ++ ++ + N N N +S + +A Sbjct: 105 KLA------------DHSQVGLPVSDLETMLLKPNKENSNTTHNPESINLS-----IAER 147 Query: 136 VAKHYARQHLLPRDVVQAHERGDIHYHDLDY--SPFFPMFNCMLIDLKGMLTQGFKMGNA 193 V K Y+ + DV AH GDIH HDL P+ + + G+ +A Sbjct: 148 VLKEYSLSKVFSPDVASAHLNGDIHLHDLGMVNRPYCSGQSIAYVARYGLNIPSITSVSA 207 Query: 194 EIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIP 253 P K A ++ + + ++ G + ++ AP++ + ++ K + I Sbjct: 208 ---PAKHADVLLAHVLKMTSVLQNNFAGAIGWDAVNMFFAPYMVGATDRQYKQLAQQLIF 264 Query: 254 DAEGYANSRTIKECYDAFQSLEYEV-NTLHTANGQTPFVTF-GFGLGT-SWESRLIQESI 310 + A R + + +L YE+ N P F G G ES+ +++ Sbjct: 265 EFNQLAGGRGGQVAFTDI-NLYYEIPNHFRDVPAIGPGGEFTGKTYGEYDQESKKFLKAL 323 Query: 311 LRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQ 370 + G + + FPK + I D + G + L L C R+ + N Sbjct: 324 FEVYLEGDSRG-QPFFFPKPLLHITDYFFKEPGWEEF----LELAC---RVASEKGNTYF 375 Query: 371 VVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNN---LGVISLNLPRIALEAKGDEATF 427 V G K CR + E + E + L +++NLPR+A AKGD+ Sbjct: 376 VFDRGGVAKLSECCRLSFELSEEDLREAHQPWKMRYCALQNVTINLPRLAYRAKGDQEVL 435 Query: 428 WKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACG--VRLNADDDVSEIFKNGRA 485 + L+D+ + L+ KA M + +A + IL + G G L D D + +A Sbjct: 436 FDLVDQYMELSAKAHMQK-------RAFIKEILDL-GKRGPLSALCVDHDGEAYLRFHKA 487 Query: 486 SISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTP 545 S +G +G++E + + G E +++++ +++++ + DQ E G L TP Sbjct: 488 SHLIGILGVNEMVQVMTGHE-LHEDKGALDLALSVIKYMELKCDQLSERYGVKMVLEQTP 546 Query: 546 SENLCDRFCRLDTAEFG-----VVPG--VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYP 598 +E+ RF +LD F V+ G T++ YYTNS HL+ ++P ++ E + Sbjct: 547 AESTAHRFAKLDLKTFPEEASRVIKGDFRTNEIYYTNSTHLNYHLALDPIQRVVEEGMFH 606 Query: 599 PLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFE-CTS 657 P+ G + + + + ++L + + H E + F+ EF C S Sbjct: 607 PMIKAGALTHVWMGEHKPDPRSLSSLVQKIFHH----------SENAQVAFSPEFTVCNS 656 Query: 658 -----KGF--TCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVK 704 +G +CP CG+ D ++ R+ GY + +NAGK+ E++ R + Sbjct: 657 CNRVHRGLFESCPTCGSADVDGIT---RITGYFTRTSS--WNAGKRGELRDRSR 705 >UniRef50_B7C7M8 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M8_9FIRM Length = 652 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 155/723 (21%), Positives = 289/723 (39%), Gaps = 104/723 (14%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAV-VSEQMQGR---NQVDINE 60 V KRDG V F +I AI +A + ++ D + + + Q + N++ + Sbjct: 4 VEKRDGSIVDFDPSKIFSAISKAFDSLHMEKDDAIINLLVLRATADFQAKIKENRISVEM 63 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQ +VE L Y +A+ YI YR R+ R+ + N+ I N+ L N + Sbjct: 64 IQDSVEKTLSESGYYPVAKTYILYRKQRENVRKIQSTANEYIH----LVNSYLHNNVPLE 119 Query: 121 DSKVIPTQR--DLL---AGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 D + T L+ +G++ +Y + + AH+ GD++ H++ + C Sbjct: 120 DENSLATYSVGGLILSNSGMITSNYWLSEVYDAQITNAHKNGDLYIHNIHM-----LTGC 174 Query: 176 ML-IDLKGMLTQGFKMGNAEIE--PPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVL 232 L+ ++ G N I P K +ST + + + ++ D +L Sbjct: 175 SAGWSLEDLILHGLPSVNKMISSLPAKHLSTLCNQMVNFLGIMQNEWASAQSLAHFDTLL 234 Query: 233 APFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF-- 290 PF+ + + + K YD +S Y +N Q PF Sbjct: 235 VPFI---------------------HKDKLSKKMVYDCLESFIYGINIPSRWGTQAPFSQ 273 Query: 291 VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNH--KKGDPNYD 348 +T + + + +R + +AGL ++ A + + D L KGD + Sbjct: 274 ITLDWNIPKEFLNR-------KAIVAGLEEDFTYADCQVEMKILHDALFEVLNKGDISGR 326 Query: 349 IKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGR---NN 405 Q + D + +++ K + TP + E ++ E + + Sbjct: 327 GFQFPIVALYLHSNFDWMQEEELFKACAKYGTP-----YFLTQEKQDVEGYFGYKPLCGS 381 Query: 406 LGVISLNLPRIA-LEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEG 464 +GV++LNL R+A L + D+ F+K LD +A ++ VK +V L+ G Sbjct: 382 MGVVTLNLVRLAYLSSSKDD--FFKRLDSLSDVAIRSF--------EVKRQVLNQLFKAG 431 Query: 465 ACGVRLNADDDVSEIFKNGRASISLGYIGIHET-INALFGGEHVYDNEQLRAKGIA--IV 521 D ++ + +LG +G++E +NA + + + D + A+ A ++ Sbjct: 432 LYPYTKAYISDFNDYYG------TLGVVGMNEACLNAKWLQKDLMD---MHAQKFAQEVL 482 Query: 522 ERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDV 581 L Q + ++ +L +TP+E++C F ++D ++ P + GYYTNS HLDV Sbjct: 483 NFLNQKISSQAQK----LNLEATPAESVCTHFAKMDKEKY---PEIQSFGYYTNSTHLDV 535 Query: 582 EKKVNPYDKIDFEAPYPPLANGG--FICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNT 639 + ++ + + L +G F + ++ + AL Y ++P + Sbjct: 536 ASTDDVFEALRIQQKVQTLYSGATSFPVFMDHGIENWKMAALLVKTIYENYNIPVFTITP 595 Query: 640 PIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEV 699 C + G+ K CP C + + RV GY + +N GKQ+E Sbjct: 596 TYSVCADHGYV-----FGKQDVCPIC----QKPLEIYSRVSGYY--RNLEDWNEGKQKEF 644 Query: 700 KRR 702 RR Sbjct: 645 SRR 647 >UniRef50_Q0TSL9 Anaerobic ribonucleoside-triphosphate reductase n=7 Tax=Clostridium perfringens RepID=Q0TSL9_CLOP1 Length = 603 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 133/622 (21%), Positives = 243/622 (39%), Gaps = 92/622 (14%) Query: 114 LNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLD----YSPF 169 +NEN+N + ++A + ++ + + ++ A++ GD+H HDL Y Sbjct: 36 VNENSNSPYSFGSLNKHIIAEVSKDYWLNEVYKDKRIIDAYKNGDMHIHDLGGLTLYCCG 95 Query: 170 FPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 + + N +L+ ++G+ P K A ++ + I G N D Sbjct: 96 YSLRNIILMGVQGIPNI------PTSSPAKHFDAILNQIANLVTIYQNEIMGAVAFNSFD 149 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTP 289 +LAP++ ++ T +E Q+ + +N+ A + Sbjct: 150 TLLAPYIKK---------------------DNLTYEEVKQNLQNFIFSINSNSRAGAEPA 188 Query: 290 FVTFGFGL----GTSWESRLIQESI-------LRNRIAGLGK-----------NRKTAVF 327 F F L + LI + I + + L K N + + Sbjct: 189 FTNITFDLFPPKDLENDPALIGDKIQEFTYKECQKEMDMLNKAFYELMNEGDYNGRPFSY 248 Query: 328 PKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSF 387 P + I + +PN D + E K YP N+ ++ M CR Sbjct: 249 PIPTYNINSNFDF--DNPNND---MLFEMTGKFGYPYFANFVNSDMDQSDVRS-MCCRLN 302 Query: 388 LGVWE--NENGEQIHDGRN--NLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALM 443 L + E NG G + ++GV+++NLPR+A + K +E F+ L E L++A+ +L Sbjct: 303 LDLRELRKRNGGLFGSGDSTGSIGVVTINLPRLAYKHKNNEKEFFNALKEILIIAKDSLE 362 Query: 444 TRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFG 503 + L + G KN ++I G +G++E F Sbjct: 363 KKRKWLNDNIINKDMLPAFSTYVGT-----------LKNHFSTI--GIVGLNEMCEN-FN 408 Query: 504 GEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG- 562 G ++ E + I + +R+ + ++EETG ++ +TP+E+ C R + D +F Sbjct: 409 GNNILTEEGMEF-SIKVCNFIREELINFQEETGNLYNFEATPAESTCYRLAKKDVEDFED 467 Query: 563 -VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKAL 621 +V G + YYTNS H+ + N D + L GG + + K+ Sbjct: 468 IIVRGGREYPYYTNSCHMPPNEVKNLKQLFDHQDKLQVLFTGGTVVHIYCDGAISGEKSK 527 Query: 622 EDVWDYSYQHVPYYGTNTPIDE-CYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVC 680 V ++ Y + +P++ C E G+ E + CP CG ++ + +R+ Sbjct: 528 HIVNTVCKKYRTPYVSISPLNRYCKEHGYVKE-----RVEECPICG----KKLDLYQRIT 578 Query: 681 GYLGSPDARPFNAGKQEEVKRR 702 GYL + FN GK+ E K R Sbjct: 579 GYLRKVEF--FNDGKKSEFKDR 598 >UniRef50_A8F4B5 Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=cellular organisms RepID=A8F4B5_THELT Length = 589 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 135/621 (21%), Positives = 253/621 (40%), Gaps = 73/621 (11%) Query: 114 LNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDY-SPFFPM 172 + EN+N + + +++ I + ++ + + + +AH GD H HDL+ +P+ Sbjct: 16 IRENSNMNYSLQGLNNHIVSEITSDYWLK-CVYTEKISKAHMEGDFHIHDLNLLAPY--- 71 Query: 173 FNCMLIDLKGMLTQGFKMGNAEIE--PPKSISTATAVTAQIIAQVASHIYGGTTINRIDE 230 C DL+ +L GF + +IE PP+ A + G + +D Sbjct: 72 --CCGWDLRDLLINGFGGVDQKIESKPPRHFRVALMQIVNFFYTLQGEAAGAQAFSNVDT 129 Query: 231 VLAPFVT---ASYNKHRKTAEEW----NIPDAEGYANSRTIKECYDAFQSLEYEVNTLHT 283 +LAPF+ SY + + +E+ N+P G+ + + D +Y N Sbjct: 130 LLAPFIAYDKLSYQEVVQCLQEFVFNLNVPTRVGF-QTPFVNITMDVVVP-KYMANEPVI 187 Query: 284 ANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKG 343 GQ T+G E + ++ + G + R + FP + + + Sbjct: 188 VGGQFQEKTYG---EFQQEMDMFNKAFCEVMLEGDARGRVFS-FPIPTYNVTGNFPWES- 242 Query: 344 DPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDG- 402 ++ + L+ +K P N+ S +P RS +N E G Sbjct: 243 ----EVGYMILQMTAKYGIPYFANF------VSSGLSPEDVRSMCCRLRLDNRELYIRGG 292 Query: 403 --------RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKA 454 ++GV+++N+PRI G E F+K L+ + +A+++L I + ++ Sbjct: 293 GLFGANPMTGSIGVVTINMPRIGY-LSGTEEEFFKRLNSIMEIAKESL---IVKRNAIEK 348 Query: 455 RVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLR 514 LY ++ + + N ++I G +G+HE + F + D + + Sbjct: 349 FTEWGLYPYSKVCLK-KVKKFFGQYWHNHFSTI--GLVGMHEALMNFF--KRGIDTPEGK 403 Query: 515 AKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEF-GVVPGVTDKGYY 573 + +++ +R+ + +++ETG F+L +TP+E R +LD F + ++ YY Sbjct: 404 TFAMRVLDFMREKLLIFQQETGTLFNLEATPAEGASYRLAKLDKECFKNIYTSGENEPYY 463 Query: 574 TNSFHLDVEKKVNPYDKIDFEAPYPPLANGG---FICYGEYPNIQHNLKALEDVWDYSYQ 630 TNS L V + + + + GG I GE ++L AL +Y+ Sbjct: 464 TNSTQLPVNYTDDLFRALQIQEDLQLKYTGGTVFHIFLGEKVEDAYSLGALIKRIFENYR 523 Query: 631 HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARP 690 +PY C + G+ G + ++CP CG V RV G+ RP Sbjct: 524 -LPYITVTPTFSICRDHGYIG-----GEEYSCPVCG----QPTEVWSRVVGFY-----RP 568 Query: 691 ---FNAGKQEEVKRRVKHLGN 708 +N GK+EE RV ++ N Sbjct: 569 VQNWNPGKREEFIHRVNYVVN 589 >UniRef50_A5M517 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Streptococcus RepID=A5M517_STRPN Length = 185 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/169 (36%), Positives = 88/169 (52%), Gaps = 23/169 (13%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQ------ 55 T V KRDG +V F ++I +A+ +AA D V +V +++ + Sbjct: 13 TLFVEKRDGRRVVFDVDKIDKALHKAA--------DKVIDVTPLVEKRLNDLTERIITEI 64 Query: 56 -------VDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQ 108 + I EIQ VE++L+ LA YI YR RD ER K +N I L+ + Sbjct: 65 HSRFPQGIKIYEIQNIVEHELLEAKEYALAEEYITYRTQRDFERSKATDINFSIHKLLNK 124 Query: 109 TNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERG 157 + +++NENANKDS V TQRDL AGIV K Q +LP+ V AH++G Sbjct: 125 -DQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLQ-MLPKHVANAHQKG 171 >UniRef50_Q2LUI4 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUI4_SYNAS Length = 731 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 80/305 (26%), Positives = 139/305 (45%), Gaps = 33/305 (10%) Query: 409 ISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGV--KARVAPILYMEGAC 466 IS+NLPR+ A+GD + LL +L LA KA + + +E + R P+ Sbjct: 438 ISINLPRLGYRAEGDSRRLFDLLTAQLELAVKAHSQKKSFMEKLLDYGRQGPLSL----- 492 Query: 467 GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQ 526 L + D + R + +G +G++E + + G+H++++ G+ IV +++ Sbjct: 493 ---LTMNRDGHPYLRPDRMTYLVGMVGLNELVR-ISTGKHLHESSTALKLGLKIVAHMKK 548 Query: 527 AVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG-------YYTNSFHL 579 +D+ +TG L +P+E RF RLD F G +G YYTNS +L Sbjct: 549 QIDKLSRKTGMRLILEQSPAETTAYRFARLDLRYFSPGAGRFIRGDVVRGGLYYTNSTNL 608 Query: 580 DVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNT 639 D+ K+ P++++ E + L G + + + +AL S+ Y+ T + Sbjct: 609 DISVKMMPFERVRQEGLFHSLIEGAALTNLRLEEKRPSKEALS-----SFIRQVYFETES 663 Query: 640 PIDECYECGFTGEFEC--TSKGF--TCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGK 695 + FT F+C T +G +CP CG ++ R+ Y SP + +N GK Sbjct: 664 A-GVTFSSDFTTCFDCRKTVRGLHESCPVCGEKAIDGLA---RITRYY-SPIS-GWNKGK 717 Query: 696 QEEVK 700 E+K Sbjct: 718 LAELK 722 >UniRef50_B5YJD4 Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=Bacteria RepID=B5YJD4_THEYD Length = 1385 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 14/231 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAA---EVDDADYCATVAAVVSEQMQGRNQVD 57 M +++KRDG VPF E+I AI +A KA + D A +++E++ Sbjct: 1 MFKNIIKRDGRIVPFDPEKITVAISKAGKATGEFDYDTAKRLTIKVLLLAEELIRDRDPH 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYR--HDRDIEREKRGRLNQEIRGLVEQTNASLLN 115 + EIQ VE L+S PY++ A+AYI YR H R E ++G L + I + + + ++ Sbjct: 61 VEEIQDIVEEILLSSPYRKTAKAYIIYRDQHARMREIARQGGL-ELIDNYLSKVDWR-IS 118 Query: 116 ENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 EN+N S + + ++ ++K Y + P +V +AH GD+H HDL+ + C Sbjct: 119 ENSNM-SFSLQGLNNYISSEISKSYWLHKIYPPEVREAHINGDMHIHDLNTLSAY----C 173 Query: 176 MLIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTT 224 + DL +L +GF G E P K + A + Y T Sbjct: 174 VGWDLMDLLIRGFGGVPGKVESRPAKHLRPALGQIVNFLYTTQGECYSSDT 224 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 84/314 (26%), Positives = 146/314 (46%), Gaps = 47/314 (14%) Query: 405 NLGVISLNLPRIALEAKGDEATFWKLLDERLV-LARKALMTRIARLEGVKARVAPILYME 463 ++GV++++LPRI + +E + +LL RL+ +A+ +L + LE Sbjct: 1097 SIGVVTIDLPRIGYLSNSEEEFYQRLL--RLMEIAKTSLEIKRKVLERFTD--------- 1145 Query: 464 GACGVRLNADDDVSEIFKNGRASI-----SLGYIGIHETI-NALFGGEHVYDNEQLRAKG 517 G+ + +S I + A ++G IG++E I NA + E+ +A Sbjct: 1146 --SGLYPYSKHYLSSIKERAGAYWCNHFSTIGIIGMNEAIANARWLNSKGIWTEEGKAFA 1203 Query: 518 IAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEF-GVVPGVTDKGYYTNS 576 + +++ +R+ + ++++ETG ++L +TP+E R R+D ++ ++ ++ YYTNS Sbjct: 1204 LKVMDFMREKLLEYQKETGNLYNLEATPAEGTSYRLARIDKQKYPDIITQGSEHPYYTNS 1263 Query: 577 FHLDVEKKVNPYDKIDFEAPYPPLANGG---FICYGEYPNIQHNLKALEDVWD-YSYQHV 632 L V + + +D + GG I GE P Q + + V++ Y+ + Sbjct: 1264 TWLPVGFTESIHYILDNQDELQSKYTGGTVQHIFLGEKPEPQKLKRFIRQVFEKYT---L 1320 Query: 633 PYYGTNTPIDECYECGFT-GEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARP- 690 PY C ECG+ GE TCPKCG + RV GYL RP Sbjct: 1321 PYISITPTFSVCSECGYIEGEHS------TCPKCGRE----CEIYSRVVGYL-----RPV 1365 Query: 691 --FNAGKQEEVKRR 702 +N GK+EE K R Sbjct: 1366 SNWNEGKKEEFKDR 1379 >UniRef50_Q58242 Mja rnr-2 intein n=3 Tax=Methanococcales RepID=Y832_METJA Length = 1750 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 25/267 (9%) Query: 289 PFVTFGFGLGT----SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRD-GLNHKKG 343 P V G GT E++LI E+++ + G K +FP + +R+ + Sbjct: 810 PAVIAGTTRGTYGDYEEEAKLILEALVDVMMEGDAMG-KPFLFPNFIIKLRENAFKDENK 868 Query: 344 DPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFL-GVWENENGEQIHDG 402 + Y I QL+ +K P +N +VT + MGCR+ L G W + +I Sbjct: 869 ELMYKIHQLS----AKFGIPYFINMLPDWQVTNT--NAMGCRTRLSGNWTGD--AEIDTL 920 Query: 403 RN-NLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILY 461 R N+ SLNLPRIA EA GD+ +++L ERL + ++AL+ + E K R LY Sbjct: 921 RTGNMQWYSLNLPRIAYEANGDDTKLFEILHERLEILKEALLI---KHEVTKER----LY 973 Query: 462 MEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIV 521 ++ L + D ++ + + G++G++E + GE +++++ G ++ Sbjct: 974 VDNLMPF-LTQEFDGESYYRYENTTKTFGFVGLNEMLKYHL-GEELHESKDAVKFGEKVI 1031 Query: 522 ERLRQAVDQWKEETGYGFSLYSTPSEN 548 E +R+ D+ KEETG +++ TP+E+ Sbjct: 1032 EYIREYADKLKEETGLRWTVTQTPAES 1058 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 26/240 (10%) Query: 15 FKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSGPY 74 F E+I +A++R A E T + E + ++ + + + ++++ Y Sbjct: 102 FDKEKIAKALIRETGADE-------ETARKIADEVERELKKLKVKYLTAPMIREIVN--Y 152 Query: 75 KQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAG 134 K + + E RH K RL + + + + ENAN + +A Sbjct: 153 KLIEYGFEELRH-------KHTRLGMPVYDITKLIKSGS-RENANLMYNPESIHK-WVAD 203 Query: 135 IVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAE 194 K YA + P+ + AH +GDIH HDL+Y+ P+ C+ DL+ G K+ Sbjct: 204 ETMKQYALLAIFPKHIADAHIKGDIHLHDLEYAATRPV--CLQHDLRPFFKYGLKVDGTG 261 Query: 195 I-----EPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA-SYNKHRKTAE 248 + +P K A A+++ +++ GG +I+ + LAP+V SY K ++ + Sbjct: 262 LHTSVSKPAKHPEVAIQHAAKVMMAAQTNMSGGQSIDEFNVWLAPYVRGLSYEKIKQLMQ 321 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 18/164 (10%) Query: 548 NLCDRFCRLDTAEF-----GVVPGV---TDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPP 599 N RF RLD + VV G D YYTNS H+ V+ + +K+ E + P Sbjct: 1591 NTAGRFARLDYKYYKEETISVVRGDLNDVDSLYYTNSSHVRVDAPITLGEKVRIEEKFHP 1650 Query: 600 LANGGFICYGEYPNIQHNLKALEDVW-DYSYQHVPYYGTNTPIDECYECGFTGEFECTSK 658 L NGG I + + + L D+ + H+ ++ + C CG + Sbjct: 1651 LCNGGHIMHIWNIESAADPEVLMDITKKITKTHIGFWTYTKNLSVCNRCGIS----MGGL 1706 Query: 659 GFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 C CG+ D ++ S R+ GYL + +N KQ+E++ R Sbjct: 1707 RDRCINCGSEDVAKFS---RITGYL--QNISNWNRAKQKELEDR 1745 >UniRef50_A2BJ51 Ribonucleotide reductase, oxygen sensitive (RNR, class III) n=10 Tax=Archaea RepID=A2BJ51_HYPBU Length = 636 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 148/668 (22%), Positives = 249/668 (37%), Gaps = 147/668 (22%) Query: 101 EIRGLV---EQTNASLLN--ENANKDSKVIPTQRDLLAGIVAKHY--ARQHLLPRDVVQA 153 E GLV E AS+ + ENAN+ P LL + K + +LP + +A Sbjct: 6 EREGLVSVAEYLEASVFDVFENANR----YPGPSGLLTYVAEKALRPVVRSVLPEPLARA 61 Query: 154 HERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIA 213 H G ++ H L Y+ F P C ++ +L +G K P + T + Sbjct: 62 HLDGRVYVHKLPYALFIPY--CSGHSVERLLRRGLKTPTITARPARHFDTFVDHVTNYLI 119 Query: 214 QVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQS 273 + + G ++ PF+ D GY +E Q Sbjct: 120 AMQHYFSGAQAFGAVELYAGPFIRR---------------DRLGY------REIRQGVQR 158 Query: 274 LEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILR--NRIAGLGKNRKTA-VFPKL 330 L + +N QTPF F L + E++L ++ + + LG+ A +F + Sbjct: 159 LIFNLNFPSRVGMQTPFTNFTVVLDAA-ETKLERDDAIYAGEPVGKLGEYLDEARLFVRA 217 Query: 331 VFAIRDGLNHKKGDPN---YDIKQLALECASKRMYPDILNYD-----------------Q 370 ++ + H +GD + + SK +Y D +D + Sbjct: 218 LYEV-----HMEGDVAGRPFTFPIPTIMTTSKLLYDDPEIFDAVFGAAARRGTGYWLNTR 272 Query: 371 VVKVTGSFKTPMGCRSFLGVWENENG-------EQIHDGRNNLG---------------- 407 VV SF M CR + + E + +I D R L Sbjct: 273 VVDPNASFA--MCCRINIDMNELRHALRVGGKSMRIRDIRRELEQAREEYIRSLEKQHMG 330 Query: 408 -------------VISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKA 454 VI++NLPRIALEA+ D+ F + LDE L L R L R E + A Sbjct: 331 GLWAMPDITGSKVVITVNLPRIALEARRDDEAFVEKLDETLALVRSGLEWFARRYERL-A 389 Query: 455 RVAPILYMEGACGVRLNADDDVSEIFKNGRAS--ISLGYIGIHETINALFGGEHVYDNEQ 512 + P Y + V E + ++ + +G IG+ E A+ G+ E Sbjct: 390 KAYPEFYS--------MVLEYVPEALRLMGSTYFLPVGVIGLSEA-AAIMAGDPKAWTEG 440 Query: 513 LRAKGIAIVERLRQAVD-------QWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG--- 562 R++ + E +++ V+ +W ++TG F++ P E+ R D F Sbjct: 441 SRSQWFRMAEWMKKTVEHIVSRTREWSKKTGIPFNVEEVPGESAAARLAERDVQLFPELR 500 Query: 563 -VVPGVTDKGYYTN--SFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY---GEYPNIQH 616 +P + Y T+ ++ +E +++++ E P+ GG I + GE P+ + Sbjct: 501 EYLPDPEEPIYSTSIAPYYAPMEL----WERVEVEERVQPVFTGGVIMHIFLGEEPDPE- 555 Query: 617 NLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF--TCPKCGNHDASRVS 674 L +L + V Y+ + C CG+ +S G TCP+CG Sbjct: 556 ALASLTRKLAANTSLV-YWSYTPALSVCPRCGW------SSVGIRTTCPRCGGE----TE 604 Query: 675 VTRRVCGY 682 + R+ GY Sbjct: 605 IWSRIVGY 612 >UniRef50_C7ZMN2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7ZMN2_NECH7 Length = 833 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 130/618 (21%), Positives = 237/618 (38%), Gaps = 116/618 (18%) Query: 132 LAGIVAKHYARQHLLPRDVVQAHERGD----IHYHDLDYSPFFPMFNCMLIDLKGMLTQG 187 L V+ H Q+ L + + + D H HDL + + C ++ +L QG Sbjct: 36 LMQYVSNHIISQYWLDKIYTEEIRKYDSENRFHIHDLGFLSAY----CSGWSIEDILLQG 91 Query: 188 FKMGNAEIE--PPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRK 245 F +I+ PPK ++TA + + + G ++ D LAPF+ + Sbjct: 92 FGGVENKIQCRPPKHLNTALNQIVNFLFTLQGELAGAQALSSFDTYLAPFIRS------- 144 Query: 246 TAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF--------------- 290 ++ + E + QS Y +N + Q PF Sbjct: 145 --------------DNLSYVEVFKYLQSFVYSLNVPTRSGFQAPFTNLSLDLICPSRLGD 190 Query: 291 --VTFGFGLGTSW-------ESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK 341 V G L W E ++ ++ + G G N FP + + +G++ + Sbjct: 191 QSVIIGGELHEEWIYSDFQEEMDILNKAFAEVMMQGDG-NGNIFSFPIPTYNLCEGIDWE 249 Query: 342 KGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE------NEN 395 P + + E +K P N+ F++ M CR L + + + Sbjct: 250 S--PRW---KSIWEMTAKYGVPYFANFINSDLDPEDFRS-MCCRLRLDLSKLHCRVGGQY 303 Query: 396 GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKAR 455 G G ++GV+++NLP +A + G + TF L + L +A+ +L + +L A Sbjct: 304 GASPLTG--SIGVVTVNLPNLAYRSNGSKETFLAELSDTLRVAKDSLEIK-RKLVDSNAA 360 Query: 456 VAPIL--YMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQL 513 + P Y+ G + N ++I G G++E + ALF GE + + Sbjct: 361 LYPYAAHYLSATKG-------RTGSYWTNHFSTI--GVNGMNEAVVALF-GETIAKQKMF 410 Query: 514 RAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYY 573 + +++ +++ + +++ ETG ++L ++P+E+ C +F R D F P +Y Sbjct: 411 ---ALEVLDFIKERLQEFQNETGNLYNLEASPAESTCYKFARQDKILF---PDRKIPTFY 464 Query: 574 TNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYG-------EYPNIQHNLKALEDVWD 626 TNS L V+ + ++ + + GG + + E+ ++ +K L Sbjct: 465 TNSTMLPVDTTEDLFEALAHQEDLQCSYTGGTVFHAFLGERLPEWKLARNLIKLLT---- 520 Query: 627 YSYQHVPYYGTNTPIDECYECGFTG--EFECTSKGFTCPKCGNHDASRVSVTRRVCGYLG 684 S +PY C G+ E EC G +C V R+ GY Sbjct: 521 -SRFRIPYITLTPTFSICKTHGYRAGEEPECLLCGESC-----------LVYSRIVGYFR 568 Query: 685 SPDARPFNAGKQEEVKRR 702 R +N GK EE R Sbjct: 569 P--TRDWNKGKSEEFTAR 584 >UniRef50_C5A351 Anaerobic ribonucleoside triphosphate reductase (NrdD) n=2 Tax=Thermococcus RepID=C5A351_THEGJ Length = 617 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 128/609 (21%), Positives = 219/609 (35%), Gaps = 136/609 (22%) Query: 145 LLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTA 204 L+P++ +AH GDI+ H L YS + P C +L +G K P + T Sbjct: 51 LVPKEGREAHFSGDIYIHKLPYSLYIPY--CTGHSTARLLEKGLKTPTIVSRPARHFDTY 108 Query: 205 TAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTI 264 A + + + G ++ ++ PF+ RK ++ Sbjct: 109 VDHIANYLITMQHYFSGAQALSSVEWYAGPFIRKEGLDRRKIRQQ--------------- 153 Query: 265 KECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILR-NRIAGLGKNRK 323 Q L Y +N QTPF F L + ++ R+ LG+ + Sbjct: 154 ------IQRLVYNLNYPSRVGMQTPFTNFTVTLDAPKKMLEGDHAVYAGERVEPLGEYER 207 Query: 324 TA--VFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVT---GSF 378 A F L +R+G G P + L +K ++ D ++ V GSF Sbjct: 208 EAKDFFIALTEVLREG--DALGQP-FTFPIPTLMVTAKMLWDDPEIFEAVFATASKRGSF 264 Query: 379 ------------KTPMGCR------------------------------SFLGVWENENG 396 M CR F G+W Sbjct: 265 YWLNTNVVDPDASYAMCCRIAIDKTEMAFAFGVSGKSAEEEALERLERGRFGGLW----- 319 Query: 397 EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKA---LMTRIARL-EGV 452 + D ++ V ++NLPR+AL+A+G++ FW+ ++ L + RK R RL Sbjct: 320 -AMPDVTGSVNVTTVNLPRLALKARGNDDKFWEEYEKVLGVVRKTTDWFRERYVRLITSY 378 Query: 453 KARVAPI-LYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNE 511 K + I LY+E G N ++G +G+ E + +++ E Sbjct: 379 KHMYSMIHLYLEEFPGSHFN----------------TVGILGLPEAASIYLNEPKLWE-E 421 Query: 512 QLRAKGIAIVERLRQAVD-------QWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV 564 R + E +++ V+ +W ETG +++ P E+ + D EF + Sbjct: 422 GTRKDWLRAAELMKEMVEFATAKAREWMRETGTPWNVEEVPGESAAAKLAIKDMREFPEL 481 Query: 565 PGVTDKGYYTNSFHLDVEKKVNPY-------DKIDFEAPYPPLANGGFICY---GEYPNI 614 K Y ++ + V PY D+I E GG + + GE P+ Sbjct: 482 -----KEYLSDPENPIYSTSVAPYYGALELADRIRVEEKVQKSFTGGVMMHIFLGEEPDP 536 Query: 615 QHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFT-CPKCGNHDASRV 673 + K + + + Y+ I C CG++ T+ +T CP+CG+ + V Sbjct: 537 EALAKLTKRL---MRTELVYWSYTPAITVCNACGYS-----TTGLYTHCPRCGSEN---V 585 Query: 674 SVTRRVCGY 682 V R+ GY Sbjct: 586 EVWSRIIGY 594 >UniRef50_Q1PZG5 Similar to oxygen sensitive ribonucleoside triphosphate reductase NrdD n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZG5_9BACT Length = 812 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 121/581 (20%), Positives = 240/581 (41%), Gaps = 63/581 (10%) Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDI-EREKRGRL-NQEIRGLVEQTNASLLNEN 117 EI + VE ++ S +++ + I D ++ ER +L Q + G+ + L+ Sbjct: 153 EIASVVEQRVFSSGLNRISTSLIRELVDNELFERGYSKKLEKQAVLGMPKYDLDELILSK 212 Query: 118 ANKDSKVIPTQRDLLAGIVA----KHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMF 173 ++S + + + +A K YA Q + ++V +AH G +H HDL Y Sbjct: 213 NKENSNIATNNPEAINLAIAENTLKQYALQEVFSKEVSEAHLSGMVHLHDLGYPT---RV 269 Query: 174 NCMLIDLKGMLTQGFKMGNAEIE--PPKSISTATAVTAQIIAQVASHIYGGTTINRIDEV 231 C L+ + G + N + + P K T T +A + ++ G + I+ + Sbjct: 270 YCSSHSLEYLKKYGLSLENLDTDSAPAKHARTLTGHLNTFLASMQAYYAGALGVGYINIM 329 Query: 232 LAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNT-LHTANGQTPF 290 AP++ ++ K + I A SR + + L++ ++T + P Sbjct: 330 YAPYLEGMSHQEMKQEAQHLIFSCSQSAFSRGGQTLF-----LDFNIHTGIPGYLKDIPA 384 Query: 291 VTFGFGLGTSWESRLIQESILRNRIAGLGKNRK------TAVFPKLVFAIRDGLNHKKGD 344 + G G T E+ R +A L R+ FPK F I + K Sbjct: 385 IGPG-GKPTGKTYGEYAETARRFTLAMLDVWREGDCYGHVFAFPKCDFHINE--ESFKDP 441 Query: 345 PNYDIKQLALECASKRMYPD-ILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGR 403 Y++ + A + AS+ P + + D++ CR + +N + R Sbjct: 442 KQYELLEYACQIASENGVPYFVFDRDEIT-------LSACCRLRTTIDDNYMIKHPESMR 494 Query: 404 -NNLGVISLNLPRIALEA-KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILY 461 I++NLP+ + +A KG+ +K +D+ + +A KA + + + + + L+ Sbjct: 495 FCGFQNITINLPQASYKAGKGNWDALYKEIDKAIEIAVKAHLQKKKFISKLMSGPEMPLW 554 Query: 462 MEGACGVRLNADDDVSEIFKNGRASISL-------GYIGIHETINALFGGEHVYDNEQLR 514 ++ + K+GR + L G IG++E + + G E +++ + + Sbjct: 555 -------------EIGKKAKDGRPYVDLEASTYIVGIIGLNECLQFMTGKE-LHEGDDMI 600 Query: 515 AKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEF----GVVPGVTDK 570 +G+ +V + V + ++ FSL +P+E+ R ++D F VV G ++ Sbjct: 601 RQGLRVVSHMYTRVKEAGKKHKLKFSLEESPAESASRRLAKVDMRNFPEAADVVKGNDER 660 Query: 571 G--YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYG 609 YYTNS HL + V+ +I ++ + + G I + Sbjct: 661 DGLYYTNSIHLRPDAPVDMITRIYLQSKFHTMIESGAIIHA 701 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 4/124 (3%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR---NQVD 57 M +V+KRDG PF ++I +AI +AA+A +D +A VVS + + N Sbjct: 4 MIEYVVKRDGRTAPFVEKKIADAIFKAAQAVGGNDRALAEELAVVVSMFLAKKYNGNPPG 63 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 I IQ VE L+ + + A+AYI YR R R+ R+ ++ + V+ T+ SL+ + Sbjct: 64 IENIQDVVEKVLIETGHAKTAKAYIIYRDKRARIRDSL-RVRKQSQKRVDTTDVSLMVDT 122 Query: 118 ANKD 121 KD Sbjct: 123 ETKD 126 >UniRef50_B8D5R3 Anaerobic ribonucleoside triphosphate reductase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5R3_DESK1 Length = 848 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 73/312 (23%), Positives = 131/312 (41%), Gaps = 47/312 (15%) Query: 387 FLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRI 446 F G+W + D ++ V+ +N+PR+ALEA+G++ FW+L DE L L R+A+ Sbjct: 545 FGGLW------AMPDITGSVNVVDINIPRLALEARGNDTRFWELYDEALKLVREAVDWFR 598 Query: 447 ARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASI--SLGYIGIHETINALFGG 504 AR + YM ++E +S ++G IG+ E L Sbjct: 599 ARYVKILKEHPNFYYM-------------ITEYMPEFPSSHFNTIGLIGLPEAAAILLQE 645 Query: 505 EHVY----DNEQLRAKGIA--IVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDT 558 ++ ++ LRA + +VE +W +E+G +++ P+E+ + LD Sbjct: 646 PKLWLDGNRSDWLRATELMRKMVEHATNTARRWMQESGTPWNVEEVPAESASPKMAALDM 705 Query: 559 AEFGVVPGVT---DKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY---GEYP 612 + + D Y+ S ++ D+I+ EA GG + + E P Sbjct: 706 KLYPELADYLPDPDNPVYSTSIAPYYAPEMELPDRIEVEARVQKYFTGGVMMHIFLAEEP 765 Query: 613 NIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECG--FTGEFECTSKGFTCPKCGNHDA 670 K + + D + Y+ + C CG +TG ++ +CP+CGN + Sbjct: 766 EPDALAKLAKRIMD---TDIVYWSFTPALTYCPSCGRTYTGLYK------SCPRCGNEN- 815 Query: 671 SRVSVTRRVCGY 682 + V R+ GY Sbjct: 816 --IEVWSRIIGY 825 >UniRef50_A7I0I1 Anaerobic ribonucleoside-triphosphate reductase n=27 Tax=Bacteria RepID=A7I0I1_CAMHC Length = 893 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 87/311 (27%), Positives = 130/311 (41%), Gaps = 42/311 (13%) Query: 406 LGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGA 465 +GV+++NL R+ K DE + L+E LA L + + + R LY Sbjct: 607 IGVVTINLARLGYLYKNDEDALFARLNELCELASGTLEKKRKFITKMFERG---LYPYTK 663 Query: 466 CGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLR 525 +R N ++ S I NG + + E I FG R I+E LR Sbjct: 664 RYLR-NFNNHFSTIGINGANEMIKNFTDDKENIATPFG----------RKFATKIIEFLR 712 Query: 526 QAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG--VVPGVTDKGYYTNSFHLDVEK 583 + + ++E TG ++L +TP+E RF + D F + G + YYTNS L Sbjct: 713 EKIKYFQERTGNLYNLEATPAEGTTYRFAKEDKKRFKDIIQAGFGENIYYTNSTQLPANF 772 Query: 584 KVNPYDKIDFEAPYPPLANGGFICYG------EYPNIQHNL--KALEDVWDYSYQHVPYY 635 + + +D + GG + + + NI NL K +E+ +PY Sbjct: 773 TDDVFLALDLQDELQNSYTGGTVFHLYMKEKIQNGNICANLVRKIVENY------RLPYI 826 Query: 636 GTNTPI-DECYECGF-TGEFECTSKGFTCPKCGNHD-ASRVSVTRRVCGYLGSPDARPFN 692 T TPI C+E G+ GE E CP C + SR V RV GY ++ FN Sbjct: 827 -TITPIFSVCHEHGYIAGEHEF------CPVCEQENKKSRCMVYTRVMGYYRPIES--FN 877 Query: 693 AGKQEEVKRRV 703 GK E K R+ Sbjct: 878 TGKIGEHKERI 888 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 21/195 (10%) Query: 55 QVDINEIQTAVENQLM-SGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASL 113 ++ + +IQ +E +L SG +K L ++++ YRH ++RE LN + + + Sbjct: 216 KISVEDIQDMIEKELFKSGNFKVL-KSFMLYRHTHKLQREHILGLNDDTTYI---NSTQT 271 Query: 114 LNENANK-------DSKVIPTQRDLL---AGIVAKHYARQHLLPRDVVQAHERGDIHYHD 163 +NE NK +S + L+ AG V ++ + ++ AH GD H HD Sbjct: 272 INEYINKIDWRISANSNTSYSNAGLINNTAGKVVANFWLDSVYNKEEGAAHRNGDYHIHD 331 Query: 164 LDYSPFFPMFNCMLIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYG 221 LD + C L+ +L +GF G E + P+ +A A + + S G Sbjct: 332 LDCLSGY----CAGWSLRVLLNEGFNGVRGRVESKAPRHFYSALYQMANFLGILQSEWAG 387 Query: 222 GTTINRIDEVLAPFV 236 + D LAP+V Sbjct: 388 AQAFSSFDTYLAPYV 402 >UniRef50_C2WAD7 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Bacillus cereus Rock3-44 RepID=C2WAD7_BACCE Length = 170 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 1/144 (0%) Query: 105 LVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDL 164 +V L+ ENAN D + A AK+YA + LL V +A + ++ HDL Sbjct: 25 IVHGNEQDLMQENANVDGRSPMGMMGTFASESAKYYAIEQLLSEQVKKAISQNILYPHDL 84 Query: 165 DYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTT 224 D+ C I L ML +GF G+ + P+ I +A A+++ I + +GG + Sbjct: 85 DFYATGTT-TCSQIPLAQMLEKGFHTGHGHMRQPQDIKSALALSSIIFQANQNMQHGGQS 143 Query: 225 INRIDEVLAPFVTASYNKHRKTAE 248 D LAP+V ++ +++K E Sbjct: 144 FALFDMDLAPYVRKTFERNKKKLE 167 >UniRef50_A8A8G8 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8G8_IGNH4 Length = 660 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 77/325 (23%), Positives = 133/325 (40%), Gaps = 50/325 (15%) Query: 399 IHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALM---TRIARLEGVKAR 455 I D ++GV+++NLPRIAL+A+GD TF+++L+ER+ L K L RL Sbjct: 348 IPDITGSIGVVTVNLPRIALDARGDVETFFEILEERVELVAKWLSWWRNHYLRLMKTYRN 407 Query: 456 VAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRA 515 +++ R + + ++G IG+ E L G V+ +E + A Sbjct: 408 FYSMVWEYSPEWTRTHFN--------------TIGAIGMPEAAAILLGDPEVWTSEDVGA 453 Query: 516 KGIAI------VERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTD 569 K AI ++ + + E G F++ P E + D + V Sbjct: 454 KEKAIELEDKMIKTMADIASRLTIEMGEPFNVEEVPGETAAAKLFLNDLKHYPEVREYVP 513 Query: 570 KG--YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY---GEYPNIQHNLKALEDV 624 +G Y+ S + + + +I +E GG + + GE P+ + K + + Sbjct: 514 EGVDMYSTSVVPYYDHGITLWQRIKWEGKVQQRFTGGVMMHIFLGEQPDPEALAKLTQKI 573 Query: 625 WDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFT-CPKCGNHDASRVSVTRRVCGYL 683 D V Y+ I C E G T +T CP+CG ++ + R+ GY Sbjct: 574 MDAG---VVYWSYTPAISVC-ENGHK-----TVGLYTRCPRCG----AKTEIWSRIIGYY 620 Query: 684 GSPDARP---FNAGKQEEVKRRVKH 705 RP +N +Q+E + R + Sbjct: 621 -----RPVSNWNPFRQKEFRMRTHY 640 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 27/158 (17%) Query: 137 AKHYARQHL----LPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGN 192 A+ Y +H+ +P+D++ AH+ G ++ H L S F P C D +L +G K Sbjct: 61 AERYLWEHVVEDVMPKDMISAHKEGVVYVHKLPQSVFLPY--CNGNDYSRVLKKGLKTPT 118 Query: 193 AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNI 252 P + A A A +A + + G ++ +APF+ Sbjct: 119 IVAGPARHYQVAMAHAANFLAMMQQYWTGAQAFGSVELWVAPFI---------------- 162 Query: 253 PDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF 290 A+ + + I++ Q+L YE+N QTPF Sbjct: 163 --AKEHLSDEEIRQ---GIQTLYYELNLPWRPGMQTPF 195 >UniRef50_D2MLR7 ATP cone domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLR7_9FIRM Length = 511 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 74/311 (23%), Positives = 121/311 (38%), Gaps = 67/311 (21%) Query: 5 VMKRDGCKVPFKSERIKEAILRA----AKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 V KRD F+ ++IK AI +A K D A A E + + + + Sbjct: 4 VKKRDNSLTEFEMDKIKTAIKKAFHGSKKRIHSSVLDLLAIRAVADFEDKMVDDVISVED 63 Query: 61 IQTAVENQLMSGPYKQLARAYIEY---------------RHDRDIEREKRGRLNQEIRGL 105 IQ +VE+ L Y ++A+AYI Y R+ +D+ER G I GL Sbjct: 64 IQDSVEHVLSECGYSEVAKAYILYRREHERIREIEEVNHRYLKDMERYLEGNPENTIGGL 123 Query: 106 VEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLD 165 + +ASL K Y + + R + +A +RG++ ++ Sbjct: 124 ILNHSASL-----------------------TKLYWLEDIYDRSIREAVQRGELEIRGME 160 Query: 166 -YSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTT 224 +P+ ++ ++ KG+L+ K+G P K STA + + + + + Sbjct: 161 MMAPYSCKWDLSVLLEKGILSVQEKVGTL---PAKHFSTACSHIMNFVGIIQNEWVSVQS 217 Query: 225 INRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA 284 +D +LAPFV RK D YA E + Q+L Y +N Sbjct: 218 FEHVDTLLAPFV-------RK--------DQLNYA------EIKQSIQTLVYGLNVPSRW 256 Query: 285 NGQTPFVTFGF 295 G+ PF F Sbjct: 257 GGRAPFSHFAL 267 >UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=Mycobacterium RepID=A1KG47_MYCBP Length = 710 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V +RDG VPF RI+ A+ RAA+ DD D TVA V++ + GR + +IQ Sbjct: 9 VRRRDGTLVPFDIARIEAAVTRAAREVACDDPDMPGTVAKAVADAL-GRGIAPVEDIQDC 67 Query: 65 VENQLMSGPYKQLARAYIEYRHDR 88 VE +L +AR YI YR R Sbjct: 68 VEARLGEAGLDDVARVYIIYRQRR 91 >UniRef50_B1L9A6 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Thermotogaceae RepID=B1L9A6_THESQ Length = 651 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 133/610 (21%), Positives = 233/610 (38%), Gaps = 125/610 (20%) Query: 149 DVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFK-MGNAEIEPPKSISTATAV 207 + V+A G ++ HD ++ P C L+ ++ +G + + EP K +ST Sbjct: 101 EFVEAQINGAVYLHDRHHAALMPY--CFAYTLQPIVEKGLPFIKTIKSEPAKHLSTFIQH 158 Query: 208 TAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKEC 267 Q + ++ G L F + +K EE IP R + Sbjct: 159 VIQFVMFASNQSSGAVG-------LPDFFVWMWYFVKKDLEEGIIP--------RDKLDW 203 Query: 268 Y--DAFQSLEYEVNTLHTANGQTPFVTFGF----GLGTSWE-SRLIQESILRNRIAGL-- 318 Y FQ L Y +N Q+P+ F + + +E R S++ + + + Sbjct: 204 YIEQHFQILTYSLNQ-PIRTTQSPYTNFTYLDRNYIKAIFEGERYPDGSLITDHVEDIIA 262 Query: 319 -----------GKNRKTAVFPKLVFAI--RDG-------------LNHKKGDPNYDIKQL 352 + R+ FP L ++ RDG +N K D N+ I Sbjct: 263 LQKHYWEWVSKERERQMFTFPVLTASLLYRDGKFLDEDSARFINKINMKWQDTNWYISDS 322 Query: 353 ALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLG----- 407 AS ++T S +T + F +E E++ N++G Sbjct: 323 IDAVAS------------CCRLTSSTQT---LKKF--SLSSEEEEKLKGRMNSIGGSDLN 365 Query: 408 -----VISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYM 462 VI++NLPRIALE+ GD + ++L R+ L +KAL A E +K R++ Sbjct: 366 IGSFKVITMNLPRIALESGGDREKYLQILRHRVQLIKKALA---AVREIIKERIS----- 417 Query: 463 EGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVE 522 EG + N + R ++G G+ E+ + + D + +G V+ Sbjct: 418 EGLLPLYENG------LMLLNRQYGTIGVTGVWESASIMGLTTEDIDGLKYTEEGEVFVD 471 Query: 523 R----LRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFH 578 +R+ ++ E G+ F++ P+E + D FG Y+N + Sbjct: 472 NVLDTIREEAEKGYHEYGFTFNIEQVPAEKAAVTLAQKDRFLFGEKQPFE---IYSNQW- 527 Query: 579 LDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDY----SYQHVPY 634 + + + ++I + + +GG I + N+ + K E+ ++ + V Y Sbjct: 528 VPLMANTDVLNRIRYSGKWDKKVSGGAIL---HINLGESFKTEEESFNMVKMIADMGVMY 584 Query: 635 YGTNTPIDECYEC-GFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNA 693 + NT I C + F GE CP CG ++V R+ GYL A FN Sbjct: 585 FAFNTKISVCEDGHAFYGE--------RCPVCGK---AKVDEYMRIVGYLVPVSA--FNK 631 Query: 694 GKQE-EVKRR 702 ++E E RR Sbjct: 632 ERREIEYPRR 641 >UniRef50_A1RX14 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RX14_THEPD Length = 639 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/344 (24%), Positives = 139/344 (40%), Gaps = 69/344 (20%) Query: 389 GVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIAR 448 G+W + D ++GV++LNLPR+A +KG+ F +LLD L AR L+T R Sbjct: 338 GIW------ALPDATGSIGVVTLNLPRLAALSKGEWPLFEELLDSLLKNARDVLLTWRKR 391 Query: 449 LEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY 508 E K A ++ + N + ++G IG+ E V+ Sbjct: 392 YE--KTLAAGLMPLTKTYLGHFNHHFN------------TIGVIGLPEAAANFMRNPKVW 437 Query: 509 ----DNEQLRAKGI--AIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG 562 E A I +V +R+ + +E GY +++ P E+ + D F Sbjct: 438 FEGGVGELQEAVEIEKKMVSLIRERASELEERDGYLYNVEEIPGESTGYKLALADLQLFK 497 Query: 563 --------VVPGVTDKGYYTNS---FHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEY 611 ++P +Y+NS ++ DV Y + +E GG + + + Sbjct: 498 EEHARGEVLIPSDGKAPFYSNSVVPYYADVPM----YQRAIWEGYVQQEFTGGVMMH-LF 552 Query: 612 PNIQHNLKALEDVWDYSYQ-----HVPYYGTNTPIDECYECGFTGEFECTSKGFT--CPK 664 + Q + KAL ++ Y+ V Y+ I C +CG ++ G+ CP Sbjct: 553 LHEQPDPKALRNL---VYRIATNTKVVYFSITPTITVCRKCG------RSTTGYLDGCPH 603 Query: 665 CGNHDASRVSVTRRVCGYLGSPDARP---FNAGKQEEVKRRVKH 705 CG +S V R+ GY RP +N GK+ E K RV + Sbjct: 604 CG---SSEVEHWSRIVGYY-----RPVSNWNPGKKAEFKLRVTY 639 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 83/225 (36%), Gaps = 31/225 (13%) Query: 100 QEIRGLVEQTNASLL-------NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQ 152 Q+ + LV S L NENAN + + L +V LP ++ Sbjct: 6 QQKKSLVRDLEESYLAGIDWERNENANHNVSYSNFRNYLFEKLVKSKEVLSEYLPPLAIE 65 Query: 153 AHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQII 212 H RGDIH H L S + P C K +L G K P + TA A Sbjct: 66 QHYRGDIHIHKLPDSLWIPY--CAGWSYKKILQLGLKTPTIISAPARHFDTAVAHLVNFF 123 Query: 213 AQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQ 272 A G ++ D +APF + +G + R IK+ Q Sbjct: 124 FMGAQEWTGAQAVSAFDLFVAPFA-----------------EGDGLSKER-IKQT---LQ 162 Query: 273 SLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAG 317 + +E+N A Q+PF + TS + L E+I+ + AG Sbjct: 163 GMLFELNYPARAGYQSPFTNITLVMDTS-KDMLEGEAIVAGKKAG 206 >UniRef50_Q12U78 Anaerobic ribonucleoside-triphosphate reductase n=14 Tax=Archaea RepID=Q12U78_METBU Length = 795 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 145/694 (20%), Positives = 247/694 (35%), Gaps = 152/694 (21%) Query: 106 VEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLD 165 ++Q + NENAN + I + Y LLP + H GD+H HDL+ Sbjct: 154 IDQGSGFEANENANLQENAETAHKKKADKISKEQYLL--LLPPKIADLHLNGDLHIHDLE 211 Query: 166 YSPFFPMFNCMLIDLK-----GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIY 220 Y F C DL+ G++ G + P A + + ++ Sbjct: 212 Y--FGTRAFCQDWDLRYFFYYGLMPDGSGAKASVAGPAMKAEVAMLHAVKALGSAQTNFA 269 Query: 221 GGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNT 280 GG APF EG + KE Q YE+ Sbjct: 270 GGQGFYNFLTFCAPFF-------------------EG----KPYKEIEQLMQMFVYEMTQ 306 Query: 281 LHTA-NGQTPF--VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDG 337 + A GQ F V G+ W + + + R R+ + V+ +R G Sbjct: 307 MMVARGGQLVFSSVQLSPGVPKMWRDKPV---VYRGRVWDGTNGTEKRVYGDYEREVRLG 363 Query: 338 LNHKK---------GDP-NYDIKQLALEC-------ASKRMYPDILNYDQV----VKVTG 376 G P N+ ++++E R P++ YD++ ++T Sbjct: 364 FKAMMNVMLEGDYWGKPFNFPKPEISIEPDFMEEDEMFNRANPELPTYDELYTMTFELTA 423 Query: 377 SFKTP---------------MGCRSFLGVWENENG-------------EQIHDGRNNLGV 408 + TP + C + N E H + V Sbjct: 424 KYGTPYFDNQLPEYRGAGEGISCYQCCAYQFSANADSDSEFDEKMYFNEGKHFSMGSWQV 483 Query: 409 ISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGV--KARVA--------P 458 ISLN PR A A+ D+ + L + A + T++ L+ + R+ P Sbjct: 484 ISLNCPRAAYLAENDDEKLFSHLKHLMDEAMEVFQTKVKWLKPIIENGRMPFATQQPKDP 543 Query: 459 ILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGI 518 + +GA V ++ S +F ++G IGI+E + G + +E A + Sbjct: 544 VTGKKGAIAVDID-----SLVF-------TIGVIGINEMVQYHTGSQM---HESRDAFKL 588 Query: 519 AIVERLRQAVDQWKEET----GYGFSLYSTPSENLCDRFCRLDT--AEF----------- 561 AI R +D + +E G +L TP+E RF D EF Sbjct: 589 AI--RAMTEMDIYGKELSRKFGMEIALARTPAETTGQRFSVSDLLHEEFRDKVISVVKGD 646 Query: 562 --GVVPGVTDKG----YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQ 615 V G+ + YYTN H+ V+ D+I+ E + P+ +GG I + Sbjct: 647 VKAAVEGIKNTHDLPIYYTNGTHVPPGADVSLVDRINIEHVFFPIVDGGDIMHIWMGEGS 706 Query: 616 HNLKALEDVWDYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGF--TCPKCGNHDAS 671 + K L+D ++ + Y+ + C + +F + G C CG+ + Sbjct: 707 PDAKGLKDFAMNLARNTQLGYFAFTKDMSVCMD-----DFHMMA-GLKDACENCGSDNIE 760 Query: 672 RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 ++S RV GY+ + +NA K++E++ R ++ Sbjct: 761 QLS---RVTGYIQAVGG--WNAAKKQELEDRKRY 789 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 5/106 (4%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQV---- 56 M + KRDG VPF E+I AI +A +A D ++ V +++ + Sbjct: 1 MIKKIRKRDGRIVPFNPEKITNAIWKAMQAVGEKDFSTAEKISKEVVRELERTLKPGEIP 60 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDR-DIEREKRGRLNQE 101 D+ +IQ VE +L+ ++A+AYI YR R +I +EK+ LN++ Sbjct: 61 DVEQIQDIVERKLIEAGLARVAKAYILYRQKRAEIRKEKQQILNKK 106 >UniRef50_C5VLT4 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Prevotella RepID=C5VLT4_9BACT Length = 719 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 + KRDG K F ++I AIL+A ++ V++ T++ +++ + +N + + +IQ Sbjct: 8 ITKRDGSKDRFSLDKIMNAILKAFES--VNEPTDLGTLSKIIA-NLNIQNDIKVEDIQNQ 64 Query: 65 VENQLMSGPYKQLARAYIEYR--HDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 VE LM Y Q+A+++I YR H D E ++ + + S + NAN + Sbjct: 65 VELALMKEGYYQVAKSFIVYRQQHTEDRETLEKMKFLSDYCVASNAATGSKFDANANVEH 124 Query: 123 KVIPT 127 K I T Sbjct: 125 KNIAT 129 >UniRef50_D1JM33 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM33_9BACE Length = 733 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 106/263 (40%), Gaps = 27/263 (10%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQGRNQVDINEIQT 63 V KR G V F E+I AI +A + +V+ D +V ++S V + IQ Sbjct: 3 VQKRTGQIVDFDLEKIGNAIKKAFDSKQVEYDPAIVKSVDKLISLTYTNV-PVSVETIQD 61 Query: 64 AVENQLMSGPYKQLARAYIEYRHDRDIER---EKRGRLNQEIRGLVEQTNASLLNENANK 120 VE LM Y +A+ +I YR R R E+ +NQ + ++S + NAN Sbjct: 62 YVERVLMQFGYYDIAKTFILYREQRKSTRFVKERIDYMNQYSQSTDNAASSSETDGNANV 121 Query: 121 DSKVIPTQRDLLAGIVAKHYARQH-------LLPRDVVQAHERGD---IHYHDLDYSPFF 170 K + + + RQ L P Q D I+ HD +P Sbjct: 122 TMKNVANLEGEVYKTTNRIIQRQRMKDELNILFPEVAKQYETDLDNHIIYTHDEASTPVL 181 Query: 171 PMFNCMLIDLKGMLTQGFKMGNAE-IEP--PKSISTATAVTAQIIAQVASHIYGGTTINR 227 + CM + L +LT+G +GN + + P P + + + +I ++S G + Sbjct: 182 KQY-CMAVSLYPLLTEG--VGNIDGVTPSEPNDLQSFSGQITNLIFLLSSQCKGAVAVGE 238 Query: 228 IDEVLAPFVTASYNKHRKTAEEW 250 F+ +Y ++ ++W Sbjct: 239 Y------FIALNYYVVKEFGDKW 255 >UniRef50_B3TA58 Putative ATP cone domain protein n=6 Tax=environmental samples RepID=B3TA58_9ARCH Length = 745 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 112/549 (20%), Positives = 211/549 (38%), Gaps = 104/549 (18%) Query: 135 IVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKM---- 190 IV + LP+D+ AH GD+H + P + + I++K ++ G + Sbjct: 277 IVFAEHLLTSTLPKDMADAHLSGDLHITNPGLWSILP--DTIFINVKTLIEDGIDLKGKH 334 Query: 191 -GNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEE 249 G I K+++ ++ + IIA ++ ++ L P +T ++ K E Sbjct: 335 LGVCRIPSVKTLNNLSSALSMIIALISKEASQEVVLDD----LIPLLT----RYSKDLHE 386 Query: 250 WNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQES 309 ++ D+F + V N + V+F LGT ++ Sbjct: 387 LE-------------RKLVDSFTTSSVIVG----YNKMSTVVSFRIPLGT-------EQK 422 Query: 310 ILRNRIAGLGKNRKTAVFPKLVFAIRDGL--NHKKGDPNYDIKQLALECASKRMYPDILN 367 I++ ++ + KL ++ GL +++KG D+ ++ Sbjct: 423 IVKTVLSAY------KTYAKLTPILKIGLVIDYEKGRIT-DVSEI--------------- 460 Query: 368 YDQVVKVTGSFKTPMGCRSFLGVW--ENENGEQIHDGRNNLGVISLNLPRIALEAKGDEA 425 +++ + G S G+ +N +H LG +S+NLPR+A E+ DE Sbjct: 461 LSEIITLGGKVMFAKHKTSQKGIICPKNSTSTVLH-----LGSLSINLPRLAFESNKDET 515 Query: 426 TFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRA 485 F AR AL+ R A L+ + R + + +RL + ++ +N + Sbjct: 516 YFR---------ARLALLMRPA-LDSMALRKKSVSNL-----IRLGFNPILAANTQNMQR 560 Query: 486 SISLGYIGIHETINALFGGEHVYDNEQLRAKGI--AIVERLRQAVDQWKEETGYGFSLYS 543 S+ I + NA++G D++ + +GI ++E + ++ G + Sbjct: 561 SVVSLVINLVGLPNAVYGILGFKDDK--KGQGILHKVIETAVDIASKKDKDLGINIIVCM 618 Query: 544 TPSENLCDRFCRLDTAEFG--VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLA 601 T S+ +RF LD ++G V +TD Y+ LD++K + K Y + Sbjct: 619 TESDG-SERFIALDGGKYGKNSVLQITDTETYSQGLVLDIDKLSSLTGKSAVITEYNKIG 677 Query: 602 ---NGGFICYGEYPNIQHNLKA--LEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECT 656 NG F+ P KA ++ V + + + C CGF E + Sbjct: 678 KILNGSFLIQITIPK---GTKAGDIKKVIEKGASITSSFKPVMQVLICGNCGFKDE-KLE 733 Query: 657 SKGFTCPKC 665 K CP C Sbjct: 734 DK---CPAC 739 >UniRef50_A6L4X5 Oxygen-sensitive ribonucleoside-triphosphate reductase n=10 Tax=Bacteroidales RepID=A6L4X5_BACV8 Length = 697 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 15/130 (11%) Query: 5 VMKRDGCKVPFKSERIKEAILRA-AKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 ++KRDG K F ++IK AI +A D TV + VS + +++ EIQ Sbjct: 8 IIKRDGKKETFSLDKIKNAIAKAFLSVGSFATQDVITTVLSRVSVS----DGMNVEEIQN 63 Query: 64 AVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNA------SLLNEN 117 VE LM+ Y +A+AY+ YR +RE R +L + L++ +A S + N Sbjct: 64 QVEVALMAEHYYSVAKAYMLYRQKHLEDREVRDKL----KFLLDYCDASNPATGSKYDAN 119 Query: 118 ANKDSKVIPT 127 AN ++K I T Sbjct: 120 ANVENKNIAT 129 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYC----ATVAAVVSEQMQGRNQVDINE 60 VMKRDG VPF ERI+ AI RA V D V ++E G+ I Sbjct: 6 VMKRDGRIVPFDRERIRWAIKRAMLEVGVHDDKLLNRVVRRVVRRINELYDGQVP-HIEN 64 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDR-DIEREKRGRLNQE 101 IQ VE +LM ++A+AYI YR + +I EK+ LN++ Sbjct: 65 IQDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKKILNKD 106 >UniRef50_A4VUA6 Oxygen-sensitive ribonucleoside-triphosphate reductase n=65 Tax=Streptococcus RepID=A4VUA6_STRSY Length = 124 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 5/98 (5%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQV-----DI 58 V+KR G V F ++I +AI++AA+ V D + +A V + + + I Sbjct: 14 QVIKRSGEIVEFDPDKIYQAIIKAAQTVYVIDETWRKNLAQVTKKVVLDLEEAHTERPTI 73 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRG 96 + +Q+ VE++L+ Y +A YI YR RD+ER G Sbjct: 74 SMVQSQVEHRLLDAGYISIAEHYISYRLQRDLERNGYG 111 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDA----DYCATVAAVVSEQMQGRNQVDINE 60 VMKRDG VPF RI+ A+ RA V D + + ++E G+ I Sbjct: 6 VMKRDGRIVPFDESRIRWAVQRAMWEVGVRDERKLDEVVKNIVKRINELYDGKIP-HIEN 64 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDR-DIEREKRGRLNQE 101 IQ VE +LM ++A+AYI YR + +I EK+ LN++ Sbjct: 65 IQDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKRILNKK 106 >UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=Thermococcaceae RepID=Q5JJ43_PYRKO Length = 1746 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 4/101 (3%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDA---DYCATVAAVVSEQMQGRNQVDINEI 61 VMKRDG VPF ERI+ AI RA V D + ++ +I I Sbjct: 6 VMKRDGRIVPFDKERIRWAIQRAMLEVGVRDEKLLNRVVRRVVRRVNELYDGQIPNIENI 65 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDR-DIEREKRGRLNQE 101 Q VE +LM +A+AYI YR + +I EK+ LN++ Sbjct: 66 QDIVELELMRAGLFDVAKAYILYRKKKAEIREEKKKILNKD 106 >UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YVI2_THEON Length = 910 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 4/101 (3%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDA---DYCATVAAVVSEQMQGRNQVDINEI 61 VMKRDG VPF ERIK AI RA V D + ++ I I Sbjct: 6 VMKRDGRIVPFDKERIKWAIQRAMLEVGVRDEKLLNRVVRRVVKRVNELYDGQVPHIENI 65 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDR-DIEREKRGRLNQE 101 Q VE +LM +A+AYI YR + +I EK+ LN++ Sbjct: 66 QDIVELELMRVGLFDVAKAYILYRKKKAEIREEKKKILNKD 106 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 19/143 (13%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADY----CATVAAVVSEQMQGRNQVDINE 60 VMKRDG VPF RI+ AI RA V D V ++E G+ I Sbjct: 6 VMKRDGRIVPFDEGRIRWAIQRAMWEVGVRDEKLLDKVVKDVVGRINELYDGKIP-HIEN 64 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDR-DIEREKRGRLNQE----------IRGLVEQT 109 IQ VE +LM +A+AYI YR + +I EK+ LN++ I L Sbjct: 65 IQDIVELELMRNGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSINALRVLA 124 Query: 110 NASLLNENANKDSKVIPTQRDLL 132 + L+ N++ K+I + R+L Sbjct: 125 SRYLMK---NEEGKIIESPRELF 144 >UniRef50_C9LGY8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Prevotella RepID=C9LGY8_9BACT Length = 727 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 152/764 (19%), Positives = 280/764 (36%), Gaps = 138/764 (18%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAE--VDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 + KRDG F ++IK AIL+A + +D A V E ++ N + + +IQ Sbjct: 33 ITKRDGTTERFSLDKIKSAILKAFTSLHQPID-----AQGLQRVIEHLRFCNGMSVEDIQ 87 Query: 63 TAVENQLMSGPYKQLARAYIEYR--HDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 VE LM+ + ++A+A++ YR H D + +R + S + NAN Sbjct: 88 NQVEVALMAEKHFKVAKAFMLYRQQHTEDRDVAERLSFMFDYCDAANPATGSKYDANANV 147 Query: 121 DSKVIPT-------------QRDLLAGIVAKHYARQ------HLLPRDVVQAHERGDIHY 161 ++K I T R LL + + Y + +LL + ++ + Sbjct: 148 ENKNIATLIGELPKRSFIRLNRRLLTDRIKQMYGKALAERYLYLLDNHFIYKNDETSL-- 205 Query: 162 HDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYG 221 +Y M+ + L G + G GN+ P ++ + ++ V+S + G Sbjct: 206 --ANYCASITMYPWL---LNGTMNIG---GNS--TAPTNLKSFCGGFVNMVFIVSSMLSG 255 Query: 222 GTTINRIDEVLAPFVTASY-NKHRKTAEEWNIPDAEGYANSRTIKECYDA---------- 270 ++ F+ Y + A+E + + I +C++ Sbjct: 256 ACATPEFLMYMSYFLQQEYGDDFYLRADEVVDLSKKQRTMDKIITDCFEQVVYSINQPTG 315 Query: 271 ---FQSLEYEVNTLHTANGQTPFVTFGF--GLGTSWES-RLIQESILRNRIAGLGKNRKT 324 FQ++ + ++ ++ F F F G SW++ +Q+ +R A + R Sbjct: 316 ARNFQAVFWNISYYDKNYFESIFGDFRFPDGKKPSWDALSWLQKRFMRWFNA--ERTRTV 373 Query: 325 AVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMG- 383 FP A L K GD + Y D ++ SF T M Sbjct: 374 LTFPVETMA----LLSKDGD------------VLDKEYADFT--AEMYAAGHSFFTYMSD 415 Query: 384 --------CRSFLGVWENENGEQIHDGRNNLG---VISLNLPRIALEAKGDEATFWKLLD 432 CR + +N + G + G V+++NL R +A + + + L Sbjct: 416 NADSLASCCRLRNEIQDNGFSYTLGAGGVSTGSKSVLTINLNRCVQQATREGLNYTEYLA 475 Query: 433 ERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYI 492 + L K + L+ ++A+ L+ G ++ R +++G Sbjct: 476 SIVDLVHKVQLAYNENLKALQAKGMLPLFDAGYINIQ--------------RQYLTIGVN 521 Query: 493 GIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDR 552 G+ E +L G + DN++ +I+ + + Q++ + F+ P+EN+ + Sbjct: 522 GMVEAAESL--GIQISDNKEYEEFVGSILGLIEKYNKQYRSKDVL-FNCEMIPAENVGVK 578 Query: 553 FCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEA-PYPPLANGGFICYGEY 611 R D VP + Y + F++ + + +K Y GG Sbjct: 579 HARWDREAGYFVP----RDCYNSYFYIVEDPNTDIIEKFRLHGRRYIEHLTGG------- 627 Query: 612 PNIQHNLKALEDVWDYSYQHV---------PYYGTNTPIDECYECGFTGEFECTSKGFTC 662 + NL E + + Y+ + Y+ N P C ECG + C Sbjct: 628 SALHMNLD--EHLGEAQYRQLLRVAAKEGCNYFTFNIPNTLCNECGTIDKRHLQE----C 681 Query: 663 PKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 P C +H+ V RV GYL F+ +Q+E RR L Sbjct: 682 PHCHSHN---VDYLTRVIGYLKR--VSNFSVDRQKEAARRYYSL 720 >UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Methanomicrobia RepID=A0B8R8_METTP Length = 688 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDD----ADYCATVAAVVSEQMQGRNQV 56 + + KRDG V F RI AI +A A + D + V VV E+ R+++ Sbjct: 12 LVERIRKRDGRIVDFDPSRISRAISKAFNALGIVDEKTPVELAGRVVDVVDERF--RDEI 69 Query: 57 -DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKR 95 + ++Q VE L+ Y Q+A+AYI YR R RE + Sbjct: 70 PSVEDVQDIVEEVLIDAGYAQVAKAYILYRQRRSEIREAK 109 >UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alkaliphilus RepID=A8MLU7_ALKOO Length = 784 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 2/87 (2%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQGRNQ-VDINEI 61 VMKR+G V F +I AI +A ++ D + + + E++Q + + + EI Sbjct: 3 QVMKRNGRLVEFNPSKITNAIKKAMAETKLGVDHNLSVKITEEIKEKIQNNAKPIHVEEI 62 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDR 88 Q VE LMS K +A+ YI YR++R Sbjct: 63 QDIVEMLLMSSDRKDVAKRYIIYRNER 89 >UniRef50_B2V5I1 Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=cellular organisms RepID=B2V5I1_SULSY Length = 665 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 23/176 (13%) Query: 125 IPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLD-YSPFFPMFNCMLIDLKGM 183 +P ++LAG K Y + +L + + H+ G + H L SP+ ++ I + G+ Sbjct: 27 LPALANILAGEAFKSYMLEEILTEEEARMHKEGWWYQHQLALLSPYCLGYSAKDISIYGI 86 Query: 184 LTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN-K 242 + + P K + T + I +A + G +N I + +V N K Sbjct: 87 SSTS--NVTPKSRPAKRLKTFLDQCSNFICLMAQELSGAVALNDIITIATSYVWYEENLK 144 Query: 243 HRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF--VTFGFG 296 RK ++E + Y AFQS Y VN L +G +PF VT FG Sbjct: 145 DRKYSDE----------------DLYHAFQSFLYNVN-LPFRSGNSPFTNVTLEFG 183 >UniRef50_Q2FSI0 Oxygen-sensitive ribonucleoside-triphosphate reductase-like n=4 Tax=Methanomicrobiales RepID=Q2FSI0_METHJ Length = 120 Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 8/69 (11%) Query: 640 PIDEC---YECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQ 696 P+D C +E T E+ CP+CG HD ++S RV GYL D +NAGKQ Sbjct: 54 PLDNCDCSHEIAATIEYCPLCGEPVCPECGCHDVVQIS---RVTGYL--QDVSGWNAGKQ 108 Query: 697 EEVKRRVKH 705 +E+K R ++ Sbjct: 109 QELKDRQRY 117 >UniRef50_B9PEY4 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9PEY4_POPTR Length = 264 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 13/154 (8%) Query: 518 IAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--PGVTDKGYYTN 575 + +++ +R + +++E TG+ ++L +TP+E RF R D + + G D+ YYTN Sbjct: 3 MRLLDHVRGRIVEFQEATGHMYNLEATPAEGTTYRFAREDRKRWPDILQAGTADQPYYTN 62 Query: 576 SFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY---GEYPNIQHNLKALEDVWDYSYQHV 632 S L V +P++ + + GG + + GE + K + S++ + Sbjct: 63 SSQLPVGFTDDPFEALARQESLQSKYTGGTVLHLYMGERLSSGEACKRMVRRALESFR-L 121 Query: 633 PYYGTNTPIDECYECGF-TGEFECTSKGFTCPKC 665 PY C + G+ GE CPKC Sbjct: 122 PYITITPTFSVCPKHGYLAGEHRF------CPKC 149 >UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=6 Tax=Clostridium difficile RepID=Q18BC3_CLOD6 Length = 729 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 12/143 (8%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAE--VDDADYCATVAAVVSEQMQGRNQVDINEI 61 +++KRDG K F +I++A+ +A+ +E VD + ++ + + EI Sbjct: 3 YIIKRDGTKELFSKSKIEDAVYKASINSEGGVDRELAYDISRKIANDYNSMEKCLSVEEI 62 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQT---NASLLNE-- 116 Q VE LM K +A+ YI YR R R K ++ + + + N +E Sbjct: 63 QDIVEVLLMESNRKDIAKHYILYRERRSEIRTKAWEFDELQKSIWKNKYRHNGESFDEWI 122 Query: 117 -----NANKDSKVIPTQRDLLAG 134 N+++ SK+I +R L AG Sbjct: 123 KRISNNSSRISKLIRQKRFLFAG 145 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 5/102 (4%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAK-AAEVDDA---DYCATVAAVVSEQMQGRNQVDINE 60 V+KRDG V F S RI+ AI A + + D+A V V+ + E Sbjct: 6 VVKRDGRVVEFDSFRIRRAIEMAMREVGKFDEAILDKVVKYVLDVIDSTFSDERPPHVEE 65 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRD-IEREKRGRLNQE 101 IQ VE LM ++A+AYI YR +R+ I +EK L ++ Sbjct: 66 IQDIVELALMKYDLFEVAKAYIVYRKEREKIRKEKMAILGKD 107 >UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=cellular organisms RepID=A9A645_NITMS Length = 884 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 5/99 (5%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDD---ADYCA--TVAAVVSEQMQGRNQVDIN 59 + KR G F ++I AI +A A D AD A V +V + + Sbjct: 13 IRKRSGAVTAFNKDKISNAIYKALAATSKADRGLADQLADNVVNKLVEQGFTSTRSPTVE 72 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRL 98 +IQ VE+ L+ +A+AYI YRH+R R+++ ++ Sbjct: 73 DIQDIVESTLIDSGNSDIAKAYIVYRHERRKLRDEKMKV 111 >UniRef50_C5VU72 Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Viruses RepID=C5VU72_9VIRU Length = 978 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 20/160 (12%) Query: 408 VISLNLPRIALEAKGDEATFWKLLDERLVLARKAL-MTRIARLEGVKARVAPILYMEGAC 466 V ++N+ RIALE GD F +L R+ ++ K L + R + +K + P LY G Sbjct: 701 VNTINMVRIALECNGDFNKFKDILKHRVDISHKYLKVQRDVIAKNIKKNLLP-LYSHGLM 759 Query: 467 GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQ 526 D++ F ++G G+ E I L G E +G+++ + + + Sbjct: 760 --------DMNNQFS------TIGINGMFEAIKILGGIETTSTGVHYTDRGLSMAKDILE 805 Query: 527 AVDQW----KEETGYGFSLYSTPSENLCDRFCRLDTAEFG 562 + + +++ GY ++ P+E+ + C+ D FG Sbjct: 806 TIGEMNKVTRKQYGYNANIEQIPAESASVKLCKKDKILFG 845 >UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQG3_9EURY Length = 305 Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKA-AEVDDADYCATVAAVVSEQMQGR-NQVDINEIQ 62 V+KRDG V F ++I +AI++A + + D VV + + R ++ + +IQ Sbjct: 21 VIKRDGRIVDFSEDKIFQAIMKAMNSIGGYGEEDAQRVTRKVVEKIKESRVERITVEKIQ 80 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDR 88 VE LM Y +A++YI YR +R Sbjct: 81 DIVEETLMLEGYINVAKSYILYREER 106 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 13/103 (12%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAK-AAEVDD-----ADYCATVAAV-------VSEQMQ 51 ++KR+G VPF RI +A+ A + +DD D +++ ++ V +++ Sbjct: 11 IVKRNGMFVPFDRNRIFQALEAAFRDTRRIDDHMPLPEDLESSIRSITHQVVKEVVQKIT 70 Query: 52 GRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREK 94 V + IQ VE+QL + +AR YI YR DR R+K Sbjct: 71 DGQVVTVERIQDMVESQLYVNGLQDVARDYIVYRDDRKAHRKK 113 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9L646 Anaerobic ribonucleoside-triphosphate reductase ... 1013 0.0 UniRef50_P43752 Anaerobic ribonucleoside-triphosphate reductase ... 925 0.0 UniRef50_D1BHZ8 Ribonucleoside-triphosphate reductase class III ... 862 0.0 UniRef50_Q032I4 Ribonucleoside-triphosphate reductase / ribonucl... 857 0.0 UniRef50_D2RBY9 Anaerobic ribonucleoside-triphosphate reductase ... 806 0.0 UniRef50_B8DWG9 Anaerobic ribonucleoside-triphosphate reductase ... 796 0.0 UniRef50_UPI0001BC56DE anaerobic ribonucleoside triphosphate red... 792 0.0 UniRef50_Q7P4N7 Anaerobic ribonucleoside-triphosphate reductase ... 790 0.0 UniRef50_C3WCA1 Anaerobic ribonucleoside-triphosphate reductase ... 787 0.0 UniRef50_D1BVJ9 Anaerobic ribonucleoside-triphosphate reductase ... 778 0.0 UniRef50_B3RGP7 Anaerobic ribonucleoside-triphosphate reductase ... 756 0.0 UniRef50_A4J2C9 Ribonucleoside-triphosphate reductase class III ... 735 0.0 UniRef50_C2BIL8 Possible ribonucleoside-triphosphate reductase n... 731 0.0 UniRef50_C8NQX8 Anaerobic ribonucleoside-triphosphate reductase ... 727 0.0 UniRef50_B1BE54 Anaerobic ribonucleoside-triphosphate reductase ... 726 0.0 UniRef50_A9KQ95 Anaerobic ribonucleoside-triphosphate reductase ... 717 0.0 UniRef50_B2A3V1 Anaerobic ribonucleoside-triphosphate reductase ... 715 0.0 UniRef50_C7MM33 Anaerobic ribonucleoside-triphosphate reductase ... 705 0.0 UniRef50_D0WIV3 Anaerobic ribonucleoside-triphosphate reductase ... 700 0.0 UniRef50_A6L0X1 Anaerobic ribonucleoside-triphosphate reductase ... 700 0.0 UniRef50_C4ZF10 Anaerobic ribonucleoside-triphosphate reductase ... 699 0.0 UniRef50_A6LHE5 Anaerobic ribonucleoside-triphosphate reductase ... 687 0.0 UniRef50_B2RKM0 Anaerobic ribonucleoside-triphosphate reductase ... 671 0.0 UniRef50_Q6QGI8 Putative anaerobic ribonucleoside-triphosphate r... 657 0.0 UniRef50_C8P1M7 Anaerobic ribonucleoside-triphosphate reductase ... 649 0.0 UniRef50_Q733N6 Anaerobic ribonucleoside-triphosphate reductase,... 643 0.0 UniRef50_A5HXZ1 Anaerobic ribonucleoside-triphosphate reductase ... 638 0.0 UniRef50_C6JR80 Ribonucleoside-triphosphate reductase n=2 Tax=Fu... 638 0.0 UniRef50_C7N7G2 Anaerobic ribonucleoside-triphosphate reductase ... 609 e-173 UniRef50_B1YME3 Anaerobic ribonucleoside-triphosphate reductase ... 607 e-172 UniRef50_B3EQU4 Anaerobic ribonucleoside-triphosphate reductase ... 607 e-172 UniRef50_B8DLP5 Anaerobic ribonucleoside-triphosphate reductase ... 599 e-169 UniRef50_C6IYT0 Anaerobic ribonucleoside-triphosphate reductase ... 598 e-169 UniRef50_A6TN19 Anaerobic ribonucleoside-triphosphate reductase ... 593 e-168 UniRef50_A9KI88 Anaerobic ribonucleoside-triphosphate reductase ... 585 e-165 UniRef50_C6BJE1 Anaerobic ribonucleoside-triphosphate reductase ... 571 e-161 UniRef50_B3QGB6 Anaerobic ribonucleoside-triphosphate reductase ... 564 e-159 UniRef50_C5H7Q4 Anaerobic nucleoside diphosphate reductase n=3 T... 554 e-156 UniRef50_A4FZY4 Anaerobic ribonucleoside-triphosphate reductase ... 550 e-155 UniRef50_C7NCJ9 Anaerobic ribonucleoside-triphosphate reductase ... 545 e-153 UniRef50_Q0W698 Anaerobic ribonucleoside-triphosphate reductase ... 545 e-153 UniRef50_D1Z2H8 Anaerobic ribonucleoside-triphosphate reductase ... 537 e-151 UniRef50_A5UN10 Anaerobic ribonucleoside-triphosphate reductase,... 531 e-149 UniRef50_UPI0001C41C69 anaerobic ribonucleoside-triphosphate red... 526 e-147 UniRef50_A8F4B5 Anaerobic ribonucleoside-triphosphate reductase ... 521 e-146 UniRef50_C3RPW0 Anaerobic ribonucleoside-triphosphate reductase ... 514 e-144 UniRef50_B3E035 Ribonucleotide reductase of class III (Anaerobic... 504 e-141 UniRef50_B8G1P5 Anaerobic ribonucleoside-triphosphate reductase ... 492 e-137 UniRef50_B7C7M8 Putative uncharacterized protein n=1 Tax=Eubacte... 484 e-135 UniRef50_D1B9B6 Anaerobic ribonucleoside-triphosphate reductase ... 477 e-133 UniRef50_A7I0I1 Anaerobic ribonucleoside-triphosphate reductase ... 472 e-131 UniRef50_C7ZMN2 Predicted protein n=1 Tax=Nectria haematococca m... 466 e-129 UniRef50_Q8TWY0 Oxygen-sensitive ribonucleoside-triphosphate red... 455 e-126 UniRef50_Q0TSL9 Anaerobic ribonucleoside-triphosphate reductase ... 453 e-126 UniRef50_C9RJ61 Anaerobic ribonucleoside-triphosphate reductase ... 450 e-125 UniRef50_C8W489 Anaerobic ribonucleoside-triphosphate reductase ... 445 e-123 UniRef50_Q12U66 Anaerobic ribonucleoside-triphosphate reductase ... 434 e-120 UniRef50_A1RX14 Anaerobic ribonucleoside-triphosphate reductase ... 422 e-116 UniRef50_A2BJ51 Ribonucleotide reductase, oxygen sensitive (RNR,... 415 e-114 UniRef50_Q1PZG5 Similar to oxygen sensitive ribonucleoside triph... 415 e-114 UniRef50_C5A351 Anaerobic ribonucleoside triphosphate reductase ... 397 e-109 UniRef50_A8A8G8 Anaerobic ribonucleoside-triphosphate reductase ... 392 e-107 UniRef50_Q12U78 Anaerobic ribonucleoside-triphosphate reductase ... 389 e-106 UniRef50_Q2LUI4 Anaerobic ribonucleoside-triphosphate reductase ... 387 e-105 UniRef50_D1SNH7 Anaerobic ribonucleoside-triphosphate reductase ... 375 e-102 UniRef50_B5YJD4 Anaerobic ribonucleoside-triphosphate reductase ... 365 3e-99 UniRef50_B1L9A6 Anaerobic ribonucleoside-triphosphate reductase ... 287 1e-75 UniRef50_D1JM33 Anaerobic ribonucleoside-triphosphate reductase ... 274 7e-72 UniRef50_B8D5R3 Anaerobic ribonucleoside triphosphate reductase ... 258 7e-67 UniRef50_C5VLT4 Anaerobic ribonucleoside-triphosphate reductase ... 241 6e-62 UniRef50_B3TA58 Putative ATP cone domain protein n=6 Tax=environ... 234 1e-59 UniRef50_A6L4X5 Oxygen-sensitive ribonucleoside-triphosphate red... 229 3e-58 UniRef50_Q58242 Mja rnr-2 intein n=3 Tax=Methanococcales RepID=Y... 218 8e-55 UniRef50_D2MLR7 ATP cone domain protein n=1 Tax=Bulleidia extruc... 211 6e-53 UniRef50_UPI0001B41CA5 anaerobic ribonucleoside triphosphate red... 201 8e-50 UniRef50_C2WAD7 Anaerobic ribonucleoside-triphosphate reductase ... 156 2e-36 UniRef50_A5M517 Anaerobic ribonucleoside-triphosphate reductase ... 145 7e-33 UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 127 1e-27 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 122 6e-26 UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 117 2e-24 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 114 1e-23 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 113 2e-23 UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=The... 110 2e-22 UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=My... 104 1e-20 UniRef50_A4VUA6 Oxygen-sensitive ribonucleoside-triphosphate red... 98 1e-18 Sequences not found previously or not previously below threshold: UniRef50_C9LGY8 Anaerobic ribonucleoside-triphosphate reductase ... 239 2e-61 UniRef50_A5D0B0 Oxygen-sensitive ribonucleoside-triphosphate red... 228 4e-58 UniRef50_C8VXW8 Oxygen-sensitive ribonucleoside-triphosphate red... 226 2e-57 UniRef50_B2V5I1 Anaerobic ribonucleoside-triphosphate reductase ... 218 5e-55 UniRef50_B9PEY4 Predicted protein (Fragment) n=1 Tax=Populus tri... 174 1e-41 UniRef50_A9A646 Regulatory protein ArsR n=4 Tax=Archaea RepID=A9... 174 2e-41 UniRef50_A3MYN5 Anaerobic ribonucleoside triphosphate reductase ... 153 2e-35 UniRef50_C5VU72 Anaerobic ribonucleoside-triphosphate reductase ... 152 6e-35 UniRef50_Q64EQ7 Oxygen-sensitive ribonucleoside-triphosphate red... 130 3e-28 UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Met... 115 7e-24 UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Acidu... 107 1e-21 UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylc... 106 3e-21 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 106 3e-21 UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=ce... 101 1e-19 UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 97 2e-18 UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=... 95 1e-17 UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Ch... 88 1e-15 UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=ce... 87 2e-15 UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=ce... 85 7e-15 UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=ce... 85 1e-14 UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Ba... 84 2e-14 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 84 2e-14 UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alp... 76 4e-12 UniRef50_B0KB73 ATP-cone domain protein n=4 Tax=Thermoanaerobact... 69 6e-10 UniRef50_B1ZWW1 ATP-cone domain protein n=2 Tax=Opitutaceae RepI... 69 8e-10 UniRef50_Q2FSI0 Oxygen-sensitive ribonucleoside-triphosphate red... 66 6e-09 UniRef50_UPI00003827C9 COG1328: Oxygen-sensitive ribonucleoside-... 65 1e-08 UniRef50_A2RN49 High confidence in function and specificity n=4 ... 62 6e-08 UniRef50_B9Y9Q5 Putative uncharacterized protein n=1 Tax=Holdema... 62 6e-08 UniRef50_B0PG79 Putative uncharacterized protein n=2 Tax=Clostri... 61 2e-07 UniRef50_Q3ADQ8 Putative uncharacterized protein n=1 Tax=Carboxy... 59 5e-07 UniRef50_C5EWH7 Putative uncharacterized protein n=2 Tax=Clostri... 59 6e-07 UniRef50_A3DFS4 Putative uncharacterized protein n=22 Tax=Clostr... 56 4e-06 UniRef50_Q2JVG1 Transcriptional repressor nrdR n=7 Tax=Bacteria ... 54 1e-05 UniRef50_B6WBR4 Putative uncharacterized protein n=2 Tax=Anaeroc... 54 2e-05 UniRef50_C9KLA5 Anaerobic ribonucleoside-triphosphate reductase ... 53 3e-05 UniRef50_A1SHU8 Putative uncharacterized protein n=1 Tax=Nocardi... 53 4e-05 UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Su... 53 4e-05 UniRef50_C7RFT0 Putative uncharacterized protein n=2 Tax=Anaeroc... 53 5e-05 UniRef50_B1L7E4 ATP-cone domain protein n=1 Tax=Candidatus Korar... 52 6e-05 UniRef50_B8ILE2 Transcriptional repressor nrdR n=96 Tax=Proteoba... 52 9e-05 UniRef50_B1H0N3 Putative ribonucleoside-triphosphate reductase n... 52 1e-04 UniRef50_Q1D346 Transcriptional repressor nrdR n=215 Tax=Bacteri... 50 2e-04 UniRef50_C4V4U4 Putative uncharacterized protein n=2 Tax=Selenom... 50 3e-04 UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alp... 50 3e-04 UniRef50_B8HVN1 Transcriptional repressor nrdR n=16 Tax=Bacteria... 50 4e-04 UniRef50_Q0SSR4 Putative uncharacterized protein n=10 Tax=Clostr... 50 4e-04 UniRef50_C2BEU7 Putative uncharacterized protein n=1 Tax=Anaeroc... 50 4e-04 UniRef50_C8WNX8 Putative uncharacterized protein n=1 Tax=Eggerth... 50 5e-04 UniRef50_A7HM70 Transcriptional repressor nrdR n=20 Tax=Bacteria... 50 5e-04 UniRef50_Q9X7J8 Anaerobic ribonucleotide reductase (Fragment) n=... 49 6e-04 UniRef50_B2KDZ3 Putative uncharacterized protein n=1 Tax=Elusimi... 49 6e-04 UniRef50_B1XJ17 Transcriptional repressor nrdR n=8 Tax=Bacteria ... 49 7e-04 UniRef50_C7NVI2 ATP-cone domain protein n=3 Tax=Halobacteriaceae... 48 8e-04 UniRef50_A8RAD8 Putative uncharacterized protein n=4 Tax=Bacteri... 48 0.001 UniRef50_C3X5R9 Anaerobic ribonucleoside-triphosphate reductase ... 48 0.001 UniRef50_Q04J60 Transcriptional repressor nrdR n=27 Tax=Streptoc... 48 0.001 UniRef50_C3XBZ1 Anaerobic ribonucleoside-triphosphate reductase ... 48 0.001 UniRef50_A7VU12 Putative uncharacterized protein n=1 Tax=Clostri... 48 0.001 UniRef50_Q1AS42 Transcriptional repressor nrdR n=10 Tax=Bacteria... 48 0.001 UniRef50_B1YDP3 ATP-cone domain protein n=16 Tax=Archaea RepID=B... 48 0.002 UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Ba... 48 0.002 UniRef50_C0QQA0 Transcriptional repressor nrdR n=4 Tax=Hydrogeno... 47 0.002 UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 47 0.002 UniRef50_B0PGE0 Putative uncharacterized protein n=4 Tax=Bacteri... 47 0.002 UniRef50_D1AIQ0 Putative uncharacterized protein n=4 Tax=Bacteri... 47 0.003 UniRef50_A1RYY0 ATP-cone domain protein n=2 Tax=Thermoproteales ... 47 0.003 UniRef50_B1C8M2 Putative uncharacterized protein n=1 Tax=Anaerof... 47 0.003 UniRef50_C8PRU3 Putative anaerobic ribonucleoside-triphosphate r... 47 0.003 UniRef50_C7RBJ3 Putative uncharacterized protein n=1 Tax=Kangiel... 47 0.003 UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyr... 46 0.004 UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Cal... 46 0.004 UniRef50_A3HUR9 Molybdopterin biosynthesis protein MoeB n=1 Tax=... 46 0.005 UniRef50_C9R8L5 ATP-cone domain protein n=12 Tax=Bacteria RepID=... 46 0.005 UniRef50_B0MS77 Putative uncharacterized protein n=2 Tax=Clostri... 46 0.005 UniRef50_A4J7P4 Putative uncharacterized protein n=1 Tax=Desulfo... 46 0.005 UniRef50_UPI0001698138 transcriptional regulator NrdR n=1 Tax=En... 46 0.005 UniRef50_A1HR65 Putative uncharacterized protein n=1 Tax=Thermos... 46 0.005 UniRef50_Q3IM07 Transcriptional repressor nrdR n=3 Tax=Halobacte... 46 0.006 UniRef50_Q6MNX8 Transcriptional repressor nrdR n=6 Tax=Bacteria ... 45 0.007 UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alp... 45 0.007 UniRef50_C7GZN2 Putative anaerobic ribonucleoside-triphosphate r... 45 0.007 UniRef50_Q086C8 Transcriptional repressor nrdR n=50 Tax=Gammapro... 45 0.008 UniRef50_C8SAI5 Restriction endonuclease n=1 Tax=Ferroglobus pla... 45 0.008 UniRef50_A1HMR9 Putative uncharacterized protein n=1 Tax=Thermos... 45 0.009 UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Bra... 45 0.010 UniRef50_Q73LK7 Putative uncharacterized protein n=1 Tax=Trepone... 45 0.010 UniRef50_B0RZP1 Putative uncharacterized protein n=2 Tax=Finegol... 45 0.011 UniRef50_A7I8W2 Transposase, IS605 OrfB family n=1 Tax=Candidatu... 45 0.012 UniRef50_Q03RK0 Transcriptional repressor nrdR n=49 Tax=Firmicut... 45 0.012 UniRef50_C2D6G3 NrdR family transcriptional regulator n=1 Tax=At... 44 0.020 UniRef50_A7HX83 Transcriptional repressor nrdR n=85 Tax=Bacteria... 43 0.027 UniRef50_A6LMS2 Transcriptional repressor nrdR n=3 Tax=Bacteria ... 43 0.033 UniRef50_C5CHN3 Transcriptional repressor nrdR n=16 Tax=Bacteria... 43 0.045 UniRef50_Q73N26 Transcriptional repressor nrdR n=2 Tax=Bacteria ... 43 0.049 UniRef50_C1SKV8 Putative uncharacterized protein n=2 Tax=Bacteri... 43 0.053 UniRef50_B1WNA0 Transcriptional repressor nrdR n=10 Tax=Bacteria... 42 0.059 UniRef50_C7GYP4 Transcriptional regulator NrdR n=1 Tax=Eubacteri... 42 0.065 UniRef50_Q1JDF4 Transcriptional repressor nrdR n=213 Tax=Bacteri... 42 0.066 UniRef50_A0Q128 Transcriptional repressor nrdR n=21 Tax=Clostrid... 42 0.071 UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hyd... 42 0.080 UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Ali... 42 0.081 UniRef50_O26580 Putative uncharacterized protein n=1 Tax=Methano... 42 0.093 >UniRef50_Q9L646 Anaerobic ribonucleoside-triphosphate reductase n=233 Tax=root RepID=NRDD_SALTY Length = 712 Score = 1013 bits (2618), Expect = 0.0, Method: Composition-based stats. Identities = 688/712 (96%), Positives = 697/712 (97%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 MTPHVMKRDGCKVPFKSERIKEAILRAAKAA VDDADYCATVA VVS QM R+QVDINE Sbjct: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAGVDDADYCATVAEVVSSQMNARSQVDINE 60 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQTAVENQLMSGPYKQLARAYIEYRHDRDI+REKRGRLNQEIRGLVEQTN++LLNENANK Sbjct: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIQREKRGRLNQEIRGLVEQTNSALLNENANK 120 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL Sbjct: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 Query: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY 240 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT SY Sbjct: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTESY 240 Query: 241 NKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 NKHRKTA+EW IPDAEGYA SRT KECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS Sbjct: 241 NKHRKTADEWQIPDAEGYARSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 Query: 301 WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR 360 WESRLIQ SILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK GDPNYDIKQLALECASKR Sbjct: 301 WESRLIQASILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDPNYDIKQLALECASKR 360 Query: 361 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA 420 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA Sbjct: 361 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA 420 Query: 421 KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIF 480 KGDE FWKLLDERL LARKALMTRIARLEGVKARVAPILYMEGACGVRL ADDDVSEIF Sbjct: 421 KGDETAFWKLLDERLALARKALMTRIARLEGVKARVAPILYMEGACGVRLKADDDVSEIF 480 Query: 481 KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFS 540 KNGRASISLGYIGIHETINALFGGEH+YD+EQLRAKGIAIVERLRQAVDQWK+ETGYGFS Sbjct: 481 KNGRASISLGYIGIHETINALFGGEHLYDSEQLRAKGIAIVERLRQAVDQWKDETGYGFS 540 Query: 541 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL 600 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL Sbjct: 541 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL 600 Query: 601 ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF 660 ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF Sbjct: 601 ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF 660 Query: 661 TCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 TCPKCGNHDA+RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG Sbjct: 661 TCPKCGNHDAARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 >UniRef50_P43752 Anaerobic ribonucleoside-triphosphate reductase n=182 Tax=root RepID=NRDD_HAEIN Length = 707 Score = 925 bits (2390), Expect = 0.0, Method: Composition-based stats. Identities = 545/704 (77%), Positives = 621/704 (88%), Gaps = 4/704 (0%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRN--QVDINEIQ 62 V+KRDG + F+ +RI AI +AA A + D YC + V ++ R+ ++DIN+IQ Sbjct: 6 VIKRDGSRAEFEIQRIINAIKKAASAVNISDEFYCHQIGQEVGNEIFTRHQGEIDINQIQ 65 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 VE++LM+ Y ++ARAYIEYRHDRD+ REKR +L +EI GL+EQ+N LLNENANKD+ Sbjct: 66 KIVEDKLMASRYPEVARAYIEYRHDRDLAREKRSQLTKEIEGLIEQSNVELLNENANKDA 125 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182 KVIPTQRDLLAGIVAKHYA+ ++LPRDVV+AHE+G+IHYHDLDY+PFFPMFNCML+DL+G Sbjct: 126 KVIPTQRDLLAGIVAKHYAKHNILPRDVVEAHEKGEIHYHDLDYAPFFPMFNCMLVDLEG 185 Query: 183 MLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242 ML++GFKMGNAEIEPPKSI TATAVTAQIIAQVASHIYGGTTINRIDEVL+P+V SY K Sbjct: 186 MLSRGFKMGNAEIEPPKSIGTATAVTAQIIAQVASHIYGGTTINRIDEVLSPYVQISYEK 245 Query: 243 HRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWE 302 H K A+EWN+PD EGYA + KEC+DAFQSLEYEVNTLHT+NGQTPFVTFGFGLGTSW+ Sbjct: 246 HLKHAQEWNVPDVEGYAKALIEKECFDAFQSLEYEVNTLHTSNGQTPFVTFGFGLGTSWQ 305 Query: 303 SRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMY 362 SRLIQ++IL+NRI GLGKN KT VFPKLVF I+ GLN KGDPNYDIKQLALECASKRMY Sbjct: 306 SRLIQQAILKNRIRGLGKNHKTPVFPKLVFTIKKGLNQNKGDPNYDIKQLALECASKRMY 365 Query: 363 PDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKG 422 PDILNYDQVVKVTGSFK PMGCRSFLG +E E G +IHDGRNNLGV+SLNLPRIALE+K Sbjct: 366 PDILNYDQVVKVTGSFKAPMGCRSFLGAYE-EKGHEIHDGRNNLGVVSLNLPRIALESK- 423 Query: 423 DEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKN 482 +E F++ LDERL +A+KALMTRIARLE KARVAPILYMEGACGVRL AD++V++IFKN Sbjct: 424 NEEDFYRTLDERLAIAKKALMTRIARLENTKARVAPILYMEGACGVRLKADENVAQIFKN 483 Query: 483 GRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLY 542 GRASISLGYIGIHETINAL+ H++D+EQLR KGIAIV L +AV +W++ETGY FSLY Sbjct: 484 GRASISLGYIGIHETINALYNKGHIFDDEQLREKGIAIVRHLSEAVKRWQKETGYAFSLY 543 Query: 543 STPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLAN 602 STPSENLCDRFCRLDT +FGV+ GVTDKGYYTNS+HLDVEKKVNPYDK+DFE YPPLA+ Sbjct: 544 STPSENLCDRFCRLDTKKFGVIEGVTDKGYYTNSYHLDVEKKVNPYDKLDFEMTYPPLAS 603 Query: 603 GGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTC 662 GGFICYGEYPNIQHNLKALEDVWDYSY VPYYGTNTPIDECYECGFTGEFECTSKGF C Sbjct: 604 GGFICYGEYPNIQHNLKALEDVWDYSYDRVPYYGTNTPIDECYECGFTGEFECTSKGFVC 663 Query: 663 PKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 PKCGNHD+++VSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL Sbjct: 664 PKCGNHDSTKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 707 >UniRef50_D1BHZ8 Ribonucleoside-triphosphate reductase class III catalytic subunit n=23 Tax=Bacteria RepID=D1BHZ8_SANKS Length = 754 Score = 862 bits (2227), Expect = 0.0, Method: Composition-based stats. Identities = 372/720 (51%), Positives = 476/720 (66%), Gaps = 11/720 (1%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCAT----VAAVVSEQMQGR--N 54 + P V+KRDG + R++ A+ A V A + V ++ R + Sbjct: 28 LAPAVLKRDGRVAEYDPARVERALTSAFADVHVGPAQLVRPAVLGLTEQVGAEIARRFTD 87 Query: 55 QVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLL 114 V I EIQ VE+ L+ + ++A AYI YR RD+ R + +N I L+ + + S++ Sbjct: 88 TVQIYEIQNVVEHVLLESRHYEVAEAYIAYRVRRDVARNRTTDVNHSIGELLSKAS-SVV 146 Query: 115 NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFN 174 NENANKDS V TQRDL AG V K +LP V AH++G+IHYHDLDY P+ PM N Sbjct: 147 NENANKDSDVFNTQRDLTAGAVGKAVGLT-MLPAHVANAHQKGEIHYHDLDYHPYSPMTN 205 Query: 175 CMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 234 C LID + ML +GF++GNAE+EPP+SI TATA QIIA V+S YGG T+NRIDE+LAP Sbjct: 206 CCLIDFRSMLGEGFRIGNAEVEPPRSIQTATAQITQIIANVSSSQYGGCTVNRIDELLAP 265 Query: 235 FVTASYNKHRKTAEEWNIP--DAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT 292 + ++ KH A EW YA ++T K+ +DA QSLEYE+NTL T+NGQTPF + Sbjct: 266 YAERNFAKHLADAMEWVSEPGRRREYAEAKTRKDIHDAMQSLEYEINTLFTSNGQTPFTS 325 Query: 293 FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQL 352 GFGLGT W R IQ++ILR RI GLG +TA+FPKL+F +R G+N + GDPNYDIKQ Sbjct: 326 LGFGLGTGWFEREIQQAILRIRIEGLGGEHRTAIFPKLIFTLRRGVNLEAGDPNYDIKQT 385 Query: 353 ALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLN 412 ALEC++KRMYPD+L+YD++V++TGSFK PMGCRSFL WE+E+GE + +GR NLGV++LN Sbjct: 386 ALECSTKRMYPDVLSYDKIVELTGSFKAPMGCRSFLQGWEDEHGEDVVEGRMNLGVVTLN 445 Query: 413 LPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNA 472 LPRIALE+ G TFW LLDERL R AL+ R+ R APILY GA G RL+ Sbjct: 446 LPRIALESHGSTETFWALLDERLDTVRDALLFRVDRCREATPGNAPILYRYGAFGQRLDP 505 Query: 473 DDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK 532 D+ V +F++GRA++SLGYIG++ET A FGG + + + I+ L QW Sbjct: 506 DEAVDTLFRDGRATVSLGYIGLYETAAAFFGGA-WEGDAAAKDFTLDILGTLAARAQQWT 564 Query: 533 EETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKID 592 E Y FS+YSTPSE+L DRFCRLD A+FG V +TDK YYTNSFH DV K P++K+D Sbjct: 565 NEHSYKFSVYSTPSESLTDRFCRLDKAKFGSVEDITDKDYYTNSFHYDVRKNPTPFEKLD 624 Query: 593 FEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGE 652 FE YP L GGFI Y EYP +QHN +ALE VWDY+Y V Y GTNTPID CY CGF+G+ Sbjct: 625 FEKDYPQLTAGGFIHYCEYPILQHNPRALEAVWDYAYDRVGYLGTNTPIDRCYACGFSGD 684 Query: 653 FECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 F T++GF CP C N D V +R CGYLG+P ARP G+ E+ RVKH+ G G Sbjct: 685 FTPTARGFACPGCDNSDPRTCDVVKRTCGYLGNPQARPMVHGRHVEISSRVKHMPAGDEG 744 >UniRef50_Q032I4 Ribonucleoside-triphosphate reductase / ribonucleoside-triphosphate reductase class III catalytic subunit n=156 Tax=Bacteria RepID=Q032I4_LACLS Length = 747 Score = 857 bits (2213), Expect = 0.0, Method: Composition-based stats. Identities = 369/713 (51%), Positives = 487/713 (68%), Gaps = 9/713 (1%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDINEI 61 +V+KRDG V F SE+I +A+ +AAK E+ D + + V ++ R V I EI Sbjct: 16 NVIKRDGRSVKFNSEKIFDALTKAAKKVELTDMSVLSELTDRVVSEIFTRFSENVKIYEI 75 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 Q+ VE +L+ QLA YI YR +RD+ R K +N I L+ + + +++NENANKD Sbjct: 76 QSIVEQELLESGETQLAEEYISYRANRDLARTKATDINFTIEKLINR-DQTVVNENANKD 134 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 S V TQRDL AG V+K LLP V AH++GDIHYHDLDYSPF M NC LID K Sbjct: 135 SNVFNTQRDLTAGAVSKAIGL-KLLPPQVANAHQKGDIHYHDLDYSPFTTMANCCLIDFK 193 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 M GFK+GNA+++ PKSI TATA +QIIA VAS YGG + +R DEVLAP+ +Y Sbjct: 194 NMFENGFKLGNAQVDSPKSIQTATAQASQIIANVASSQYGGCSFDRADEVLAPYAKLNYK 253 Query: 242 KHRKTAEEW--NIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT 299 KH K A++W E YA +T K+ YDA QSLEYE+NTL T+NGQTPFVT GFGLG Sbjct: 254 KHLKDAQKWIDGAEKQEAYAREKTAKDIYDAMQSLEYEINTLFTSNGQTPFVTVGFGLGD 313 Query: 300 SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASK 359 W +R IQ++IL RI GLG +TA+FPKL+F ++ GLN + G PNYDIK+LALEC++K Sbjct: 314 DWYAREIQKAILNVRIGGLGSEHRTAIFPKLIFTLKRGLNLEVGTPNYDIKELALECSTK 373 Query: 360 RMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALE 419 RMYPDIL+YD++V++TGSFK MGCRSFL W +ENG + GRNNLGV+++NLPRIALE Sbjct: 374 RMYPDILSYDKIVELTGSFKASMGCRSFLQGWRDENGNDVTAGRNNLGVVTVNLPRIALE 433 Query: 420 AKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEI 479 A G++ FW++ +ER+ +A AL R+ R + + + APIL+M GA G RL+A+ V E+ Sbjct: 434 AAGNKEKFWEIFNERIEIAHDALAFRVERAKEAQPKNAPILFMNGALG-RLDAEGSVDEL 492 Query: 480 FKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGF 539 + R+++SLGYIG++E +G +N + +A I IV+R+ + + W + +GY + Sbjct: 493 YNKERSTVSLGYIGLYEVATTFYG-PTWENNPEAKAFTIEIVKRMHEDCEDWSKASGYHY 551 Query: 540 SLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPP 599 S+YSTPSE+L DRFCR+D +FG V +TDK YYTNSFH DV K P++K++FE YP Sbjct: 552 SVYSTPSESLTDRFCRMDKEKFGSVADITDKDYYTNSFHYDVRKNPTPFEKLEFEKDYPV 611 Query: 600 LANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKG 659 ANGGFI Y EYP +Q N KALE VWD++Y + Y GTN PID CY CGF G+F T +G Sbjct: 612 YANGGFIHYCEYPVLQQNPKALEAVWDFAYDRIGYLGTNAPIDHCYACGFEGDFAATERG 671 Query: 660 FTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 F CP+CGN D V +R CGYLG+P ARP G+ +E+ RVKH+ NG +G Sbjct: 672 FKCPQCGNDDPKTCDVVKRTCGYLGNPQARPMVHGRHKEISSRVKHM-NGSVG 723 >UniRef50_D2RBY9 Anaerobic ribonucleoside-triphosphate reductase n=12 Tax=Bacteria RepID=D2RBY9_GARVA Length = 805 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 349/765 (45%), Positives = 469/765 (61%), Gaps = 60/765 (7%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVD----DADYCATVAAVVSEQMQGR--NQVD 57 V KRDG V F I AI A K + + ++ + ++Q R Sbjct: 28 QVEKRDGRVVDFDPLNIIMAIKAAFKDLGKEIGPQEEQLIRNISDHIEAEIQDRYNGPAK 87 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 I +IQT VE+ L+ ++AR Y YR +RDI+R + +N+ + LV + + SL+ EN Sbjct: 88 IEDIQTLVEHSLIENHLYEVARCYTSYRLNRDIDRARATDINEAVNRLVNR-DESLVREN 146 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 ANKDS V TQRDLLAG V+K A +LP V AH +GDIH+HD DYSPF M NC L Sbjct: 147 ANKDSNVYATQRDLLAGAVSKASAFS-MLPHAVSNAHMKGDIHFHDADYSPFTCMSNCSL 205 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 D ML +GF +GNA ++ PKSI TA QII +A YGG T+NR DE+L P+ Sbjct: 206 PDFGDMLAKGFALGNAMMDSPKSIGTAATQVTQIIKDIAGAQYGGQTVNRADEMLEPYAK 265 Query: 238 ASYNKHRKTAEEWNIPD------------------------------------------- 254 Y+K+ A Sbjct: 266 CDYDKNLAMAHAMIPDSTPIQVAKDMIDGLKAQEPKNLHCLDRDPLPADTPFDENLSELD 325 Query: 255 --AEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILR 312 E YA T K YDA Q++EY++N+ +NGQTPFVT GFGLGTSW +R IQ +IL Sbjct: 326 QLREVYAKIMTRKAIYDAMQTMEYQINSNRVSNGQTPFVTVGFGLGTSWFAREIQRAILL 385 Query: 313 NRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVV 372 NRI GLGK+R TA+FPKLVF I+ G+N GDPNYD+KQLALEC++KRMYPD++ Y+ +V Sbjct: 386 NRIRGLGKDRHTAIFPKLVFTIKHGVNADAGDPNYDLKQLALECSTKRMYPDVVFYENIV 445 Query: 373 KVTGSFKTPMGCRSFLGVWEN-ENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLL 431 K+TGSFK PMGCRSFL W + + G+ + DGR NLGV+++N+PRIALE+ GD FWKL Sbjct: 446 KITGSFKAPMGCRSFLQGWIDPKTGKDVEDGRMNLGVVTVNMPRIALESHGDVTRFWKLF 505 Query: 432 DERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGY 491 DER+ +A +AL RI R + AP L+ GA G RL A++ V ++F+N RA++SLGY Sbjct: 506 DERMEVAHQALRFRIMRCKQATPVNAPTLFRYGAFG-RLEANESVDQLFRNERATVSLGY 564 Query: 492 IGIHETINALFGGEHVYD---NEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSEN 548 IG++ET FG + + D NE+ + +++V R+ + QW + GY +S+YSTP+E+ Sbjct: 565 IGLYETTAVFFGKDWMQDHSWNEEGKEFALSLVRRMNKLCQQWSKAEGYHYSVYSTPAES 624 Query: 549 LCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY 608 L DRF R+D +FG + GVTD +YTNSFH V + P +K+ +E +P LA+GGFI Y Sbjct: 625 LTDRFNRMDRQKFGRIEGVTDHDFYTNSFHYPVWLQPTPMEKLRYEVDFPYLASGGFINY 684 Query: 609 GEYPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGN 667 E+P +Q N KALE VWDY+Y+ + Y GTNTPID C+ CGF G+FE T +GF CP+CGN Sbjct: 685 CEFPCLQANPKALEAVWDYAYKIGIGYLGTNTPIDHCFVCGFQGDFEPTKEGFRCPECGN 744 Query: 668 HDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 D + +VT+R CGYLG+P RP G+ EE+ RVKH+ +G+ G Sbjct: 745 SDPDKCNVTKRTCGYLGNPVQRPMVHGRHEEIAHRVKHM-SGETG 788 >UniRef50_B8DWG9 Anaerobic ribonucleoside-triphosphate reductase n=15 Tax=Bacteria RepID=B8DWG9_BIFA0 Length = 808 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 342/764 (44%), Positives = 459/764 (60%), Gaps = 60/764 (7%) Query: 5 VMKRDGCKVPFKSERIKEAILRAA----KAAEVDDADYCATVAAVVSEQMQGR--NQVDI 58 V KRDG V F I A+ A K + +A + +++ R I Sbjct: 32 VEKRDGRVVDFDPVNIVVAVKSAFADLDKEVGPQEERMILDIANQIEGEIRERYNGPAKI 91 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 +IQ VE+ L+ ++AR Y YR ++DI+R K +N+ + LV + + SL+ ENA Sbjct: 92 EDIQNLVEHALIEDHLYEVARTYTNYRLNKDIQRAKATDINEAVSRLVNR-DESLVRENA 150 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 NKDS V TQRDLLAG V+K A +LP V AH +GDIH+HD DYSPF M NC L Sbjct: 151 NKDSNVYATQRDLLAGAVSKASAFS-MLPDAVANAHMKGDIHFHDADYSPFTSMNNCSLP 209 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 D ML GF +GNA ++ PKSI TA+ QII +A YGG T+NR DE+L + Sbjct: 210 DFGDMLKHGFALGNAMMDSPKSIGTASTQITQIIKDIAGAQYGGQTVNRADEMLEEYAKR 269 Query: 239 SYNKHRKTAEEWNIPD-------------------------------------------- 254 Y K+ A Sbjct: 270 DYVKNLDMAHAMIPDSTPIEVARDMVAGLKAQEPRWLHFENREPLPADEAFDTNAPELEQ 329 Query: 255 -AEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRN 313 E YA T K YDA Q++EY++N+ +NGQTPFVT GFGLG SW +R IQ +IL N Sbjct: 330 IREIYAKIMTRKAIYDAMQTMEYQINSNRVSNGQTPFVTVGFGLGMSWFAREIQRAILLN 389 Query: 314 RIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVK 373 RI GLGK R TA+FPKLVF ++ G+N +GDPNYD+KQLALECA+KRMYPD++ YD +VK Sbjct: 390 RIRGLGKERHTAIFPKLVFTVKHGVNADEGDPNYDLKQLALECATKRMYPDVVFYDNIVK 449 Query: 374 VTGSFKTPMGCRSFLGVWEN-ENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLD 432 +TGSFK PMGCRSFL W + + G+ + DGR NLGV+++N+PRIALE+ GD FWK+ D Sbjct: 450 ITGSFKAPMGCRSFLQGWIDPKTGKDVEDGRMNLGVVTVNVPRIALESHGDVERFWKIFD 509 Query: 433 ERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYI 492 ER+ +A +AL RI R + AP L+ GA G RL +++V ++F+N RA++SLGYI Sbjct: 510 ERMEVAHQALQFRIMRCKQATPVNAPTLFRYGAFG-RLETNENVDQLFRNERATVSLGYI 568 Query: 493 GIHETINALFGGEHVYD---NEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENL 549 G++E FG + + D + + + ++IV R+ + QW + GY +S+YSTP+E+L Sbjct: 569 GLYEATAVFFGKDWMRDHAWDPEGKDFALSIVRRMNELCKQWSKAEGYHYSVYSTPAESL 628 Query: 550 CDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYG 609 DRF R+D +FG V GVTD +YTNSFH V + P +K+D+E +P A+GGFI Y Sbjct: 629 TDRFNRMDRKKFGKVEGVTDHDFYTNSFHYPVWLQPTPMEKLDYEKDFPYYASGGFINYC 688 Query: 610 EYPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNH 668 E+P +Q N KALE VWDY+Y + Y GTNTPID C+ CGF G+F T +GF CP+CGN Sbjct: 689 EFPCLQANPKALEAVWDYAYNIGIGYLGTNTPIDHCFVCGFEGDFAPTEEGFKCPECGNS 748 Query: 669 DASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 D + +VT+R CGYLG+P RP G+ EE+ RVKH+ G+ G Sbjct: 749 DPDKCNVTKRTCGYLGNPVQRPMVHGRHEEIAHRVKHMA-GETG 791 >UniRef50_UPI0001BC56DE anaerobic ribonucleoside triphosphate reductase n=3 Tax=Fusobacterium RepID=UPI0001BC56DE Length = 750 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 302/737 (40%), Positives = 434/737 (58%), Gaps = 37/737 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKA-AEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V+KRDG + F ++RI AI A K + V + + +A + + + EI Sbjct: 19 KKVIKRDGTVIDFDAQRIVNAISMAFKQHSRVIPEELVSKIAHQIENL--ENKIMSVEEI 76 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 Q V +LM+ K +A AY YR + R K + ++I LV+ +N SLL ENANKD Sbjct: 77 QDLVVKKLMASSEKDIAMAYQSYRTLKTEIRNKEKSIYKQIGELVDASNESLLIENANKD 136 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 +K I QRDLLAGI ++ Y ++PR + +AH +G+IH HDLDY F NC L++++ Sbjct: 137 AKTISVQRDLLAGISSRDYYLNKIVPRHIKEAHIKGEIHLHDLDYLLFR-ETNCELVNIE 195 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 ML G +GNA++ P S+ A QIIA V+S+ YGG +I +D L P++ S+ Sbjct: 196 RMLKGGCNIGNAKMLEPNSVDVAVGHIIQIIASVSSNTYGGCSIPYLDRALVPYIQKSFY 255 Query: 242 KHRK------------------------------TAEEWNIPDAEGYANSRTIKECYDAF 271 KH K + P A YA T + A Sbjct: 256 KHFKRGLYYTENMNEEKAEEILASYGRTGIIYDNQELKEKYPKAYRYAADLTEESVKQAM 315 Query: 272 QSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLV 331 Q LEYE+N+L T NGQTPF T G G TSWE RL+Q+ + + R+ G GKN++TA+FPK+ Sbjct: 316 QGLEYEINSLSTVNGQTPFTTIGIGTETSWEGRLVQKYVFKTRMDGFGKNKETAIFPKIA 375 Query: 332 FAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 +A+ + LN PN+DI QLA EC +K +YPDIL Q G+ PMGCR+FL W Sbjct: 376 YAMTEKLNLNPDSPNWDIAQLAFECMTKSIYPDILFITQEQWEQGTVVYPMGCRAFLSPW 435 Query: 392 ENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEG 451 +NE G++I+ GR N G S+NLPR+A++ GDE F++ LD L + ++ + R LE Sbjct: 436 KNEEGKEIYAGRFNFGATSMNLPRMAIKNPGDEKGFYRELDRVLEICKENCIFRAKYLEK 495 Query: 452 VKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNE 511 A +APIL+M GA + + ++++ G A++S+GYIG+ E L+G + D E Sbjct: 496 TTADIAPILWMYGALAEKEE-KETIADLIWGGYATVSIGYIGLSEVSQLLYGKDFAQD-E 553 Query: 512 QLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG 571 ++ K AI++ + ++Q+K ETG GF++Y TPSE+LCDRF ++D EFG +PG+TDKG Sbjct: 554 EVYKKSFAILKYIADKLEQFKAETGLGFAMYGTPSESLCDRFAKMDQKEFGDIPGITDKG 613 Query: 572 YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ- 630 YY NSFH+ K++ ++K+ EA + GG I Y E ++Q N++A+ + Y+ Sbjct: 614 YYDNSFHVSSRLKMDQFEKLRLEALGHQYSKGGHISYIETDSLQKNIEAIPAILRYAKSV 673 Query: 631 HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARP 690 + Y G N P+D+CY CG+ GEF T GFTCP+CGNHD ++SV RRVCGYL P+ARP Sbjct: 674 GIHYMGINQPVDKCYVCGYKGEFSATENGFTCPQCGNHDNKKMSVIRRVCGYLAQPNARP 733 Query: 691 FNAGKQEEVKRRVKHLG 707 FN GKQ+E+ RVKH G Sbjct: 734 FNKGKQKEIMSRVKHNG 750 >UniRef50_Q7P4N7 Anaerobic ribonucleoside-triphosphate reductase n=10 Tax=Fusobacterium RepID=Q7P4N7_FUSNV Length = 728 Score = 790 bits (2041), Expect = 0.0, Method: Composition-based stats. Identities = 296/731 (40%), Positives = 432/731 (59%), Gaps = 33/731 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAA-KAAEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V+KRDG V F RI AI + +A+ + +A+ V + + + +I Sbjct: 2 KRVIKRDGSVVEFDKSRIINAIKKTFEQASREPNMKLIEKIASQVEDLPDK--VLAVEQI 59 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 Q V +LM K +A +Y YR + REK + ++I LV+ +N LL+ENANKD Sbjct: 60 QDIVVKKLMGSSEKDIAMSYQSYRTLKAEIREKEKGIYRQIGELVDASNEKLLSENANKD 119 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 +K I QRDLLAGI ++ Y ++P + AH +G+IH HDLDY F NC L++++ Sbjct: 120 AKTISVQRDLLAGISSRDYYLNKIVPEHIKLAHIKGEIHLHDLDYLLFR-ETNCELVNIE 178 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 ML G +GNA++ P S+ A QIIA V+S+ YGG +I +D L ++ ++ Sbjct: 179 TMLRGGCNIGNAKMLEPNSVDVAVGHIVQIIASVSSNTYGGCSIPYLDRALVRYIKKTFK 238 Query: 242 KH-------------------RKTAEEWN-------IPDAEGYANSRTIKECYDAFQSLE 275 KH +K E+ P Y+ T + A Q LE Sbjct: 239 KHFLRGVKYIDDLNEEQIEELKKQDLEYLNEEIKNKYPKTYEYSVDMTEESVKQAMQGLE 298 Query: 276 YEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIR 335 YE+N+L T NGQTPF T G G TSWE RL+Q+ +L+ R+AG G ++TA+FPK+V+A+ Sbjct: 299 YEINSLSTVNGQTPFTTIGIGTETSWEGRLVQKYVLKTRMAGFGAKKETAIFPKIVYAMC 358 Query: 336 DGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENEN 395 +GLN +GDPN+DI QLA EC +K +YPDIL + PMGCR+FL +W++EN Sbjct: 359 EGLNLNEGDPNWDISQLAFECMTKSIYPDILFITPEQLKNETVVYPMGCRAFLSLWKDEN 418 Query: 396 GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKAR 455 G++ + GR N+G S+NLPRIA++ +GDE F+K LD L + + + R LE A Sbjct: 419 GKEKYAGRFNIGATSINLPRIAIKNRGDEEGFYKELDRILEICKDNCLFRARYLENTVAE 478 Query: 456 VAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRA 515 +APIL+M GA + D + ++ G +++S+GYIG+ E L+G + ++E++ Sbjct: 479 MAPILWMSGALAEK-KPKDTIKDLIWGGYSTVSIGYIGLSEVSQLLYGKD-FSESEEVYQ 536 Query: 516 KGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTN 575 K I++ + V ++KE+ GF+LY TPSE+LCDRF R+D EFG + G+TDKGYY N Sbjct: 537 KTFNILKYIADKVLEYKEKYNLGFALYGTPSESLCDRFARIDKQEFGDIKGITDKGYYDN 596 Query: 576 SFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ-HVPY 634 SFH+ ++P++K+ EA + GG I Y E ++ NL A+ D+ Y+ + Y Sbjct: 597 SFHVSSRINMSPFEKLRLEALGHKYSAGGHISYIETDSLTKNLDAIPDILRYAKSVGIHY 656 Query: 635 YGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAG 694 G N P+D+C+ CG+ GEF T +GFTCP+CGNHD++ +SV RRVCGYL P+ARPFN G Sbjct: 657 MGINQPVDKCHICGYKGEFTATKEGFTCPQCGNHDSNEMSVIRRVCGYLSQPNARPFNKG 716 Query: 695 KQEEVKRRVKH 705 KQEE+ RVKH Sbjct: 717 KQEEIMHRVKH 727 >UniRef50_C3WCA1 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCA1_FUSMR Length = 729 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 299/731 (40%), Positives = 431/731 (58%), Gaps = 32/731 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V+KRDG V F +RI A+ A K + + E M + + + +IQ Sbjct: 2 KEVIKRDGAIVEFDRDRIVRAMTMAFKQSSGTVNNELVEKITTQIENMDNKR-MHVEDIQ 60 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 V +LM+ K +A AY YR + R K + + I LV+ +N +L+ENANKD+ Sbjct: 61 DIVVKKLMASSEKDIAIAYQSYRAIKTEIRNKEKGIYKNIAELVDASNEDILSENANKDA 120 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182 K I QRDLLAGI +K Y +LP+ + +AHE G+IH HDLDY F NC L+ ++ Sbjct: 121 KTISVQRDLLAGISSKDYYLNKILPKHLKKAHETGEIHIHDLDYLLF-KETNCELVHIER 179 Query: 183 MLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242 ML G +GNA++ P S+ A QIIA V+S+ YGG +I +D L P++ S+ K Sbjct: 180 MLKGGCNIGNAKMLEPNSVDVAVGHIVQIIASVSSNTYGGCSIPYLDRALVPYIKKSFKK 239 Query: 243 HRKTAEEW---------------------------NIPDAEGYANSRTIKECYDAFQSLE 275 H ++ P A Y+ T + A Q LE Sbjct: 240 HFTKGLKYVERVDEATIKEIIDRGNIEYSNMELKEKYPLAYEYSCDLTRESVKQAMQGLE 299 Query: 276 YEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIR 335 YE+N+L T NGQTPF T G G TSWE RL+QE + R R+ G G ++TA+FPK+V+A+ Sbjct: 300 YEINSLSTVNGQTPFTTIGIGTETSWEGRLVQEFVFRTRMEGFGAKKETAIFPKIVYAMC 359 Query: 336 DGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENEN 395 +GLN + DPN+DI QL EC +K +YPDIL + G+ PMGCR+FL W +E Sbjct: 360 EGLNMNEEDPNWDIAQLGFECMTKSIYPDILFITKEQLEKGTVVYPMGCRAFLSPWFDEK 419 Query: 396 GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKAR 455 GE+I+ GR N+G ++NLPRIA++ +GDEA F+K LD + + ++ + R LE +A Sbjct: 420 GEEIYSGRFNIGATTINLPRIAIKNRGDEAGFYKELDRVMEMCKENSVFRAHYLEKTQAE 479 Query: 456 VAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRA 515 +APIL+ GA + + + ++ G A++S+GYIG+ E L+G + Y NE++ Sbjct: 480 MAPILWQSGALAEK-QPKETIKDLIWGGYATVSIGYIGLSEVSQLLYGEDFAY-NEEIYE 537 Query: 516 KGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTN 575 K I++ + + V Q+K ET GF+LY TPSE+LCDRF R+D EFG + G+TDKGYY N Sbjct: 538 KTFNILKYISEKVAQFKAETNLGFALYGTPSESLCDRFARIDREEFGDIEGITDKGYYDN 597 Query: 576 SFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ-HVPY 634 SFH+ +NP++K+ EA + GG I Y E ++++NL+A+ ++ Y+ + + Y Sbjct: 598 SFHVSSHININPFEKLRLEALGHQYSKGGHISYIETDSLKNNLEAIIEILRYAKEIGIHY 657 Query: 635 YGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAG 694 G N P+D+C+ CGF GEF T +GF CP+CGNH+ ++SV RRVCGYL P+ARPFN G Sbjct: 658 MGINQPVDKCHVCGFKGEFLATERGFECPQCGNHENDKMSVIRRVCGYLSQPNARPFNKG 717 Query: 695 KQEEVKRRVKH 705 KQ+E+ RVKH Sbjct: 718 KQKEIISRVKH 728 >UniRef50_D1BVJ9 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BVJ9_XYLCX Length = 765 Score = 778 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 338/741 (45%), Positives = 447/741 (60%), Gaps = 38/741 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRA---AKAAEVDDADYCATVAAVVSEQMQG-RNQVDI 58 P V+KRDG + + R+++AI A A VD+++ A VAAV E + V + Sbjct: 23 PTVIKRDGTRTTYDLRRVRDAIRPAWMRAWDDAVDESELAAVVAAVDGEIFRRFPTDVKV 82 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 EIQ VE L+ + +A Y YR ++D+ R++ + ++ L T++ + NENA Sbjct: 83 YEIQAIVEQTLIETGHGDVAEIYATYRLEKDLRRKQAFSVEHQVGRL---TDSEVANENA 139 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 NKDS+V QRD +AG VAK +LP V AH +G IH+HDLDYSP+ P NC L Sbjct: 140 NKDSRVFHVQRDRMAGSVAKARGLA-MLPPRVASAHIKGQIHFHDLDYSPYTPFNNCDLP 198 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 + ML GF MGNA++E PKSI TA + AQ+I V+S YGG TI ID +LAP+ Sbjct: 199 NFADMLANGFTMGNAQVESPKSIETAASQLAQLIIAVSSSQYGGVTIETIDLLLAPYAEK 258 Query: 239 SYNKHRKTAEEW--NIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFG 296 SY KH TA +W + D + YA TIKE YD+ Q+L + VNT + GQTPFV+ G G Sbjct: 259 SYQKHLATAAKWIRDESDRDAYARDLTIKEIYDSAQTLLFNVNTTASTQGQTPFVSIGLG 318 Query: 297 LGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALEC 356 LGTSW R IQ+++ + GLG +T VFPKL+F ++ G+N + DPNYDIKQLA+ C Sbjct: 319 LGTSWLEREIQKAVFAVQEKGLGAEGRTPVFPKLIFTLKRGVNLEPTDPNYDIKQLAVRC 378 Query: 357 ASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWEN-ENGEQIHDGRNNLGVISLNLPR 415 A+KRMYPD++ YD +VK+TGS+KT MGCRS L + N + GEQ GR NLGV++LNLPR Sbjct: 379 ATKRMYPDVVLYDNIVKITGSYKTAMGCRSHLSAYVNPQTGEQETVGRMNLGVVTLNLPR 438 Query: 416 IALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNA-DD 474 IALE++GD FW+LLD RL + +AL R AR+ APILY G + +D Sbjct: 439 IALESRGDTEEFWRLLDGRLEICHEALRFREARVRQAVPENAPILYKSGGFARLEDGDND 498 Query: 475 DVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQW--- 531 + +F NGRA++SLGYIG++E FG NEQ + I ++ ++ D W Sbjct: 499 GLGRLFDNGRATLSLGYIGLYEVATVFFG-RRWETNEQAKQFTIDVLAHMKSKCDAWNAA 557 Query: 532 ------KEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG----YYTNSFHLDV 581 + G S+YSTPSE+L DRF ++D FGVVP VTDKG YY NSFHLD Sbjct: 558 DFSGTGGKVAGASISVYSTPSESLTDRFAKMDRERFGVVPDVTDKGSGRTYYVNSFHLDP 617 Query: 582 EKKVN----PYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH-VPYYG 636 P+ K+DFEAPY P +GGFI Y E+PN+++N KA+E VWDY+Y H + Y G Sbjct: 618 RLGEADGWGPFRKLDFEAPYAPYTSGGFIHYTEWPNVRNNPKAVEAVWDYAYDHDIGYMG 677 Query: 637 TNTPIDECYECGFTGEFECTSKGFTCPKCGN-------HDASRVSVTRRVCGYLGSPDAR 689 N PID C+ CG+ G+F ++GFTCP CGN D V V RRVCGYL P AR Sbjct: 678 VNVPIDRCFRCGYEGDFVAANEGFTCPVCGNTGRIENGDDPDSVEVIRRVCGYLSEPVAR 737 Query: 690 PFNAGKQEEVKRRVKHLGNGQ 710 G+Q E+ RV H Sbjct: 738 GVARGRQHELADRVNHTAGSN 758 >UniRef50_B3RGP7 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Viruses RepID=B3RGP7_9CAUD Length = 707 Score = 756 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 305/713 (42%), Positives = 439/713 (61%), Gaps = 18/713 (2%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADY----CATVAAVVSEQMQGRNQVDIN 59 V+KRDG + + ++ +A A + + + CA V + + + + Sbjct: 2 KVVKRDGREEFYNGIKVIKAAESALLESGHTEEEAYRIACAVNEVVANNLPTDQCTISVK 61 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 I VE+ LM K AR YI+YR RD RE G+L +I G +++T ENA Sbjct: 62 NIHILVEDALMDMGLKCAAREYIQYRQTRDNNREAGGKLLADISGFLDRTCDEFTKENAI 121 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 K + + T RDLLAGI++KH A +LP V + H RG IH HDLDY P+ NC L++ Sbjct: 122 KPTIHVHTHRDLLAGILSKHLASTQILPDRVSEEHNRGFIHVHDLDYL-ISPLTNCCLVN 180 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 ML GF +GNA + PKSI AT + +QI + VAS YGG T++ ID LA + A+ Sbjct: 181 YPDMLENGFNIGNAHVSKPKSIGVATTILSQISSAVASAQYGGQTMSHIDHYLAQYAEAT 240 Query: 240 YNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT 299 Y K+ K +E +PDAE A T K+ +D+ Q+L Y++NTL + NGQTPF+T GL T Sbjct: 241 YEKNLKFCQEHWLPDAETVAMQMTDKDVFDSMQTLLYQINTLTSVNGQTPFITLSLGLDT 300 Query: 300 SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASK 359 S R+I ++ L+ GLG+ R T VFPK++F + +G+N GDPNYD+K+LALEC+++ Sbjct: 301 SVFGRMITKNYLKVHKMGLGEERITPVFPKVLFFLEEGVNMNPGDPNYDLKRLALECSAE 360 Query: 360 RMYPDILNYDQVVKVTGSF---KTPMGCRSFLGVWEN-ENGEQIHDGRNNLGVISLNLPR 415 R+YPD ++ KVTGS T MGCRSFL + + E GE+ + GR NLGV+SLNLP Sbjct: 361 RIYPDFVSVPLNRKVTGSTDGKVTSMGCRSFLSKYNDLETGEEKYLGRFNLGVVSLNLPM 420 Query: 416 IALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDD 475 IA +AK + F+ +LDE L LA +A + R+ RL+G KA PI++ EGA RL+ ++ Sbjct: 421 IAAKAKTEGVDFFAVLDEYLDLAYEAHLVRVNRLKGTKAGQNPIMWCEGALA-RLDPEES 479 Query: 476 VSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEET 535 + ++F +G ASIS+GYIG++ET L E +A + I++ +R A +++K+E+ Sbjct: 480 IDKLFYDGYASISIGYIGVYETCQIL-------GREGDKALALGILQHMRDACERYKKES 532 Query: 536 GYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEA 595 FSLY TPSE+LC + E+ V + Y TNSFH V +P+DK ++E Sbjct: 533 RLAFSLYGTPSESLCYKAATCLDREYPEVLK-HEHEYLTNSFHQPVWINSSPFDKWEYEE 591 Query: 596 PYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFEC 655 + +++GG I Y E PN+++NL ALE + D+ Y+H+ Y+G N P+D+C +CGF+GEF Sbjct: 592 GFAMISSGGNIGYVETPNLKNNLDALEALVDFGYKHIMYFGINQPVDKCLKCGFSGEFSA 651 Query: 656 TSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGN 708 T+KGF CP+CGNH+ +SV RRV GYL SP++RP+N GKQ EV RVKH G+ Sbjct: 652 TAKGFVCPECGNHEEGTISVIRRVSGYLSSPNSRPYNKGKQAEVIERVKHYGS 704 >UniRef50_A4J2C9 Ribonucleoside-triphosphate reductase class III catalytic subunit n=7 Tax=Bacteria RepID=A4J2C9_DESRM Length = 676 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 238/721 (33%), Positives = 368/721 (51%), Gaps = 54/721 (7%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ---GRNQVD 57 M V KRDG +V F +I EAI RAAKA +D + V + ++ N Sbjct: 1 MFTKVRKRDGREVAFNETKITEAIFRAAKAVGGEDRQTAMELTLDVLKMLKKQYNGNLFG 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 + E+Q VE L+ + + A+AYI YR R R+ R L + ++ +T+ EN Sbjct: 61 VEEVQDMVEKVLIESGHARTAKAYILYRAQRTRLRDARSDLMDAVEEILGETS----REN 116 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 AN S + +A +K Y L+P ++ QAH RGD+H HDLD+ + C+ Sbjct: 117 ANV-SNSPSAKMLQIASAASKKYYLTRLIPEEMSQAHARGDLHIHDLDF--YGKTLTCIQ 173 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 I L +L +GF G+ I PK ++ATA+ A I+ + ++GG + D +APFV Sbjct: 174 IPLGRLLKEGFNTGHGYIRAPKRPTSATALAAIILQSSQNDMHGGQSFAFFDRDIAPFVE 233 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLH-TANGQTPFVTFGFG 296 + + +E Y A ++L Y +N++H A Q PF + G Sbjct: 234 NA-----------------------SEEETYQAMEALIYNLNSMHSRAGAQVPFSSLNLG 270 Query: 297 LGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALEC 356 TS +R++ +++L AGLG+ + +FP ++F +++G+N GDPNYD+ QLA+ Sbjct: 271 TETSEAARMVIKNLLLAYEAGLGRG-ENPIFPNIIFKLKEGINLNPGDPNYDLFQLAIRV 329 Query: 357 ASKRMYPDILNYDQVVKVT-GSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPR 415 +SKR+ P D G MGCR+ V N G + DGR NL ++NLPR Sbjct: 330 SSKRLNPTFSFMDSSFNKEYGDQVGYMGCRT--RVMANRKGPAVTDGRGNLSFTTINLPR 387 Query: 416 IALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVRLNAD 473 IA++A+ + F++LLDE L ++ + L R +K + P + +G LN + Sbjct: 388 IAIKAERNIDKFYRLLDETLDMSFRQLYHRFTVQAKLKVKDMPFVMGQGLYLGSQGLNPN 447 Query: 474 DDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKE 533 D + E+ K+G ++S G+IG+ E + AL G H +E+ + G+ IV +RQ +D+ E Sbjct: 448 DTLEEVIKHG--TLSPGFIGLAEALVALNGQHHG-QSEETQKLGLEIVSYMRQKIDEASE 504 Query: 534 ETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDF 593 + ++L +TP+E++ RF +LD EFG++PGVTDK YYTNSFH+ V + ++KI Sbjct: 505 KYDLNYTLLATPAESVSGRFAKLDRKEFGIIPGVTDKEYYTNSFHIPVGYPIGIFEKISL 564 Query: 594 EAPYPPLANGGFICYGEYPNIQ-HNLKALEDVWDYS-YQHVPYYGTNTPIDECYECGFTG 651 E PY N G I Y E + HN +A+E + + + Y N P+D C C TG Sbjct: 565 EGPYHKYCNAGHISYVEMASPPLHNPQAVEAIIKHMQASDMGYAAINFPVDYCTSCSVTG 624 Query: 652 EFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQI 711 +CP+C + + RV RR+ GYL + D FN K E+ R H G Sbjct: 625 VI----NQDSCPRCESPEIRRV---RRITGYLSTVDR--FNDAKVAELNDRTTHSGFSPK 675 Query: 712 G 712 G Sbjct: 676 G 676 >UniRef50_C2BIL8 Possible ribonucleoside-triphosphate reductase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BIL8_9FIRM Length = 706 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 266/715 (37%), Positives = 419/715 (58%), Gaps = 23/715 (3%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKA-AEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V+KRDG KV F ++I AI +A + + + A +A+ + E+ + + ++ I EI+ Sbjct: 3 QVIKRDGTKVDFNKDKITIAIEKAMHSPSGIYVEGQAAEIASEIEERSKNKREISIYEIE 62 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 V +L+ A++Y Y+ + +RE+ + EI GL+ QTN +++EN+NK+ Sbjct: 63 DLVYYKLIDRKNPATAKSYESYKSVQAYKREQNTS-DDEIIGLLNQTNIDVMDENSNKNP 121 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182 + TQRDL+AG VAK A++ L+P D+V+AH+ G IH HDLDY P+FNC L+D+K Sbjct: 122 IIASTQRDLIAGEVAKDIAKRKLIPLDLVEAHDSGAIHIHDLDYL-IQPIFNCCLVDMKD 180 Query: 183 MLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242 ML G + IE PKS A V QIIAQ+AS+ YGG +IN L+P++ S+ K Sbjct: 181 MLDNGTVVNEKMIESPKSFQVACNVMTQIIAQIASNQYGGQSINIA--CLSPYLEKSFEK 238 Query: 243 HRKTAEEWNIPD--AEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 + K A E D A+ A++ T ++ Q+++Y++NTL T+NGQ+PFVT + Sbjct: 239 NLKLASEILKDDDQAKKMADALTQRDLESGIQTIQYQINTLMTSNGQSPFVTLFMHTDEN 298 Query: 301 W----ESRLIQESILRNRIAGLGKNR---KTAVFPKLVFAIRDGLNHKKGDPNYDIKQLA 353 ++ I + IL+ RI G+ ++ T FPKL++ + + N +D+ +LA Sbjct: 299 DPYLDQTVEIIKEILKQRIQGIKNDQGVYVTPAFPKLIYVLDEN-NINPDSKYFDLTRLA 357 Query: 354 LECASKRMYPDILNYDQVVK-VTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLN 412 +C +KRMYPD ++ ++ + G+ PMGCR+FL ++++ GE DGR N+GV ++N Sbjct: 358 AKCTAKRMYPDYISAKKMRENYEGNVFAPMGCRAFLPPYKDKYGEYKFDGRFNMGVCTIN 417 Query: 413 LPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNA 472 LP+I + A GDE F+++L++RL L ++ + R L V + +PI + GA RL Sbjct: 418 LPQIGILAHGDEKLFFEILEKRLDLVKRVGILRYDHLAKVTSDSSPIHFQHGAIA-RLKK 476 Query: 473 DDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK 532 + + + +NG A++++GYIGI+E G H ++ + I+E L +W Sbjct: 477 HESIKPLLENGYATVTIGYIGIYEATKLTIGESH--TTKRGHDFAMKIMEMLNDKKKEWS 534 Query: 533 EETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKID 592 EE G F++Y TP+E+L RF +D FG + VTDKGYYTNSFH+DV + ++ +DK D Sbjct: 535 EEYGIAFAVYGTPAESLTHRFASIDRERFGDIKDVTDKGYYTNSFHVDVRENISVFDKFD 594 Query: 593 FEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGE 652 FE+ + L+ GG I Y E PN+ +N++A+ + +Y Y H+ Y NT D C CG+ GE Sbjct: 595 FESEFQKLSTGGCISYAEIPNMTNNIEAVLTMIEYIYDHIQYAEFNTKSDYCGNCGYDGE 654 Query: 653 FECTS-KGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 + CP CGNHD + ++V RR CGYLG +N G+ +E+K RV H+ Sbjct: 655 ILLDDNNQWYCPNCGNHDRATLTVVRRTCGYLG---ENFWNEGRTKEIKARVLHI 706 >UniRef50_C8NQX8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Corynebacterium efficiens RepID=C8NQX8_COREF Length = 728 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 284/718 (39%), Positives = 414/718 (57%), Gaps = 23/718 (3%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+K+DG V ++ +I ++ A + + + ++ ++ + + ++ Sbjct: 18 VLKKDGRVVDYRPRKILNSLEAAERTSGEPLHAPSDQLLGEITRRVAEHHIISTEDLSRL 77 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKV 124 VE L P + AY +Y+ ++ + + I G+VE +A +L EN NKD++ Sbjct: 78 VEQTLAQSP--AVLAAYRDYQRRQEEKINSSTDITHAITGVVE-GDAKILAENGNKDART 134 Query: 125 IPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGML 184 TQR++LAG V+K Q +LP D+ +AH +G IH HDLD SPF M NC L D +L Sbjct: 135 FTTQREILAGAVSKAKGLQ-MLPEDIRRAHLKGLIHVHDLDRSPFAAMPNCSLPDFDYLL 193 Query: 185 TQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHR 244 + GF +GNA IEPP+SI A + Q++ ++ YGG +I+ ID +L P+ + K+R Sbjct: 194 SHGFTLGNARIEPPRSIGVAATLLVQLLGAISGEQYGGISIHEIDRLLEPYAELTLQKNR 253 Query: 245 KT------------AEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT 292 + A + E A +T K+ +DA Q+ EY+VNTL TA QTPF + Sbjct: 254 RLYSDASGLLCSDSATDAQDDLVEELARRKTAKDIFDAMQAFEYQVNTLTTAAAQTPFTS 313 Query: 293 FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQL 352 G+ TSW R IQ+SIL R G+ +TA+FPK++F + +G+NH GDPNYDIK Sbjct: 314 ISLGMTTSWCGREIQKSILAVRENGMS--GETAIFPKIIFFVDEGVNHAPGDPNYDIKMA 371 Query: 353 ALECASKRMYPDILNYDQVVKV-TGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISL 411 A+ C+ +R+YPD+++ ++ ++ G TPMGCRSFL W+N +G+ GRNNLGV+S+ Sbjct: 372 AMRCSMRRIYPDLVSVPRIRELKQGQLITPMGCRSFLHPWKNSDGDYELLGRNNLGVVSI 431 Query: 412 NLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLN 471 NLPRIA+ A+ F+ LDE + L +AL R + API+Y +G G Sbjct: 432 NLPRIAIAAQQSVDDFFTGLDEAIDLGVRALRIREEVVLSADLEQAPIMYTQGGMG-NPA 490 Query: 472 ADDDVSEIF---KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAV 528 V + + + R+SISLGY GIH + AL G EH + RA I+E + V Sbjct: 491 GKTSVRDFYTGDNHKRSSISLGYTGIHNAMVALTGEEHWHTVAGHRALSHRILEHMNTRV 550 Query: 529 DQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPY 588 +++ S+Y+TPSE+LCDRF LD FG +PG+ D+ YY NSFH NP Sbjct: 551 VAVQDQFHATVSVYATPSESLCDRFAELDRDRFGELPGINDRDYYENSFHFPSYLHTNPM 610 Query: 589 DKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECG 648 DKI FEA Y PL GGF+ Y E PN+ N A E +WD ++ HV Y+G N+P+D C CG Sbjct: 611 DKIHFEAQYMPLTPGGFMYYVEAPNLLVNPMAFESIWDEAFDHVGYFGINSPVDHCLVCG 670 Query: 649 FTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 F GEF C +G+TCP C N D ++ SVTRR+CGYLG+P RP +G+Q E+ R+KH+ Sbjct: 671 FEGEFHCDEQGYTCPGCSNRDETQASVTRRLCGYLGAPMKRPVVSGRQAEINSRIKHM 728 >UniRef50_B1BE54 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BE54_CLOBO Length = 705 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 299/713 (41%), Positives = 437/713 (61%), Gaps = 16/713 (2%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAA-EVDDADYCATVAAVVSEQMQGRNQVDIN 59 M V+KRDG +V F RI AI A K + + D +A +SE ++++ + Sbjct: 1 MIKTVIKRDGREVEFNINRIVNAIELAMKDTKQGIEKDLSVHIANDISEI--NKDKITVE 58 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 EIQ VE++LM K +A+ YI+YR++R R+ + + ++++ + + +NAN Sbjct: 59 EIQDLVEDKLMDSR-KDVAKEYIKYRNERTKARDSKSNVFEKMQDTFDMKSEDN-RDNAN 116 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 K + T R ++A I + +AR +P +++ H++ I+ HD +Y P FNC+LI+ Sbjct: 117 KAGDKLQTYRAMIADIACREFARTKTIPEKILKEHKK-TIYNHDENYMCL-PFFNCILIN 174 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 + ML GFK+G IE PKSI+TA A+ +QI+A V+S+ YGG T+ IDE L + S Sbjct: 175 YRDMLK-GFKVGMTPIETPKSITTAIAILSQIVAHVSSNCYGGNTLAEIDEGLEIYAKRS 233 Query: 240 YNKHRKTAEEWNIPDAEGYANSRT--IKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGL 297 Y KH +T +W + + KE YDA Q EYE+ TL + G+ PF+T FG Sbjct: 234 YKKHFRTGMKWLKNKKKAKKYAWEKLEKEVYDACQGFEYEIQTLTNSRGEVPFLTITFGK 293 Query: 298 GTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECA 357 G RLIQES L+ RI GL T VFPK+ F ++ GLN + DP YDI QLAL+C Sbjct: 294 GRGKFCRLIQESYLKVRIDGLT-GGITPVFPKICFILKRGLNLEPQDPQYDIYQLALKCT 352 Query: 358 SKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIA 417 SKR+YPD L YD+VV++TG FK+PM CRSFL +++ENG DGR N GV S+NL R+A Sbjct: 353 SKRIYPDYLMYDRVVEITGDFKSPMSCRSFLSTYKDENGHIKTDGRFNQGVCSINLVRLA 412 Query: 418 LEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVS 477 +++KGDE F++LL L L ++ALM R L+G+KA+ APILYM GA RLN +D + Sbjct: 413 IQSKGDENKFFELLHNALDLTKEALMFRHNMLKGIKAKQAPILYMNGAVA-RLNPEDAID 471 Query: 478 EIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGY 537 ++ N +SIS+GY+G+H + AL+G + Y++E++ KG I++ LR D+ K+ET Sbjct: 472 KLLYNNYSSISIGYVGLHNCMVALYGKSY-YESEEMLQKGAKIMQYLRDYCDEAKKETTI 530 Query: 538 GFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPY 597 GFSLYSTP+E L +FC+ D +FG++ GV D+GYY NSFH K + P++KID E+ Y Sbjct: 531 GFSLYSTPAETLATKFCKEDVKDFGLIEGVNDQGYYENSFHYPSNKDITPFEKIDLESHY 590 Query: 598 PPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFEC-- 655 +A+GG I Y E+ N+++NL+ALE + Y+Y Y+G N D C +CG+ G Sbjct: 591 SKIASGGAIQYVEFGNMENNLEALEKIVTYAYDKCHYFGVNVRPDRCLKCGYKGVINPQH 650 Query: 656 -TSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLG 707 T + CP+CGN D +++ R+CGY+GS RP K +E+ RV H G Sbjct: 651 ETENDYICPQCGNTDPLTMNICIRLCGYIGSLSERPTIDNKMKEMHNRVVHCG 703 >UniRef50_A9KQ95 Anaerobic ribonucleoside-triphosphate reductase n=16 Tax=Bacteria RepID=A9KQ95_CLOPH Length = 708 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 275/718 (38%), Positives = 418/718 (58%), Gaps = 26/718 (3%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATV-AAVVSEQMQGRNQVDINEIQ 62 V+KRDG + +I AI +A + + + A ++ + ++ + + EIQ Sbjct: 2 KVVKRDGRVTDYDRNKILVAIRKANDEVDPKEKITEDKIEAIILGIEHLKKDTMYVEEIQ 61 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 +E +LM+ LA+ YI YR R++ R K ++ I L+ +N ++ EN+NK++ Sbjct: 62 DMIEQKLMAERKFVLAKTYIIYRFRRELVR-KANTTDESIMSLIRHSNEDVMEENSNKNA 120 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182 + TQRDL+AG V+K ++ LLP + +AHE G +H+HD DY +FNC LI++K Sbjct: 121 VIASTQRDLIAGEVSKDLTKRLLLPEKITKAHEEGILHFHDADYF-LQSIFNCCLINIKD 179 Query: 183 MLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242 ML G M IE PKS A V QII+ VAS YGG +++ L ++ S +K Sbjct: 180 MLENGTVMNAKLIESPKSFQVACTVMTQIISAVASSQYGGQSVDI--RHLGKYLRHSMDK 237 Query: 243 HRKTAEEWNIPDA-----EGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGL 297 +RK E +A E + R E Q+++Y++NTL T NGQ+PFVT L Sbjct: 238 YRKRYESLFNGEASEEVIEKFVQERVQDELRSGVQTIQYQINTLMTTNGQSPFVTLFLNL 297 Query: 298 GTS----WESRLIQESILRNRIAGLGKNR---KTAVFPKLVFAIRDGLNHKKGDPNYDIK 350 E+ +I E ILR R+ G+ + T FPKL++ + + K G +Y I Sbjct: 298 DKDDEYIEENAMIIEEILRQRLEGIKNEKGVYITPAFPKLIYVLDEHNCLKGGKYDY-IT 356 Query: 351 QLALECASKRMYPDILNYDQVVK-VTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVI 409 +LA++C++KR+YPD ++ ++ + G+ + MGCRSFL W++ENG+ +GR N GV+ Sbjct: 357 KLAVKCSAKRLYPDYISAKKMRENYEGNVFSCMGCRSFLSPWKDENGDYKFEGRFNQGVV 416 Query: 410 SLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVR 469 SLNLP+I + A GDE FW+LL+ERL L +ALM R LEG + V+PI + GA R Sbjct: 417 SLNLPQIGIIANGDEEIFWQLLEERLALCFEALMCRHRALEGTISDVSPIHWQYGAIA-R 475 Query: 470 LNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVD 529 L + + ++ NG ++ISLGYIG++E + G H ++ + I+ RL+ A D Sbjct: 476 LKKGETIDKLLHNGYSTISLGYIGLYEVTKLMKGVSH--TQKEGTEFALRIMNRLKDAAD 533 Query: 530 QWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYD 589 WK+ETG GF LY TP+E+LC RF R+D FG + +TDKGYYTNS+H+DV + ++ + Sbjct: 534 TWKKETGIGFGLYGTPAESLCYRFARIDKERFGDIKDITDKGYYTNSYHVDVREDIDAFS 593 Query: 590 KIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGF 649 K FE+ + +++GG I Y E PN++HNL+ALE++ + Y ++ Y NT D C+ CGF Sbjct: 594 KFTFESQFQVISSGGAISYIEVPNMRHNLEALEEIVKFIYDNIQYAEFNTKSDYCHVCGF 653 Query: 650 TGEFECTSK-GFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 GE + + CP CGN D ++++VTRR CGYLG +N GK +E+ RV H+ Sbjct: 654 DGEIKINEDFEWECPNCGNKDHAKMNVTRRTCGYLG---ENFWNKGKTKEINARVLHI 708 >UniRef50_B2A3V1 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Clostridia RepID=B2A3V1_NATTJ Length = 736 Score = 715 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 236/731 (32%), Positives = 366/731 (50%), Gaps = 44/731 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDI 58 M V+KRDG + PF +I AI +A KA + +D ++ V ++ G ++ + Sbjct: 15 MPTKVVKRDGREQPFDPSKITNAIKKALKAIDKEDHSLALSLTYQVINKLTKHGVDKPTV 74 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 +IQ VEN LM + ++ARAY+ YR+DRD RE +L +E+ ++E + ENA Sbjct: 75 PQIQEMVENSLMDTGHYEVARAYVIYRNDRDRIREADTKLMKELLKVLETRDQ----ENA 130 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 N + + K H + QAH G IH HD D++ C+ I Sbjct: 131 NVNGDAPMGKMLKGGSEAMKEVYLNHFAKNEHSQAHRNGYIHIHDADFAAIG-TTTCLQI 189 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 L +L +GF G+ I PKSI +A +++ + + +GG + D LAP+V Sbjct: 190 PLDRLLAEGFNTGHGWITTPKSIESAASLSCIVFQSNQNDQHGGQSFATFDSSLAPYVKI 249 Query: 239 SYNKHRKTAEEWNIPDA-EGYANSRTIKECYDAFQSLEYEVNTLH-TANGQTPFVTFGFG 296 +++K + + I + + A + K Y A Q + +NT+H A Q PF + FG Sbjct: 250 TFDKIKNELSQLGISENIDDKAWEQVKKRTYQAMQIFVFNLNTMHSRAGAQVPFTSVNFG 309 Query: 297 LGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALEC 356 L TS RLI E +L+ GLG+ +T +FP L+F++ G+N + GDPNYD+++LA E Sbjct: 310 LDTSPWGRLISEMLLKVYKKGLGRG-ETPIFPNLIFSLATGVNKEPGDPNYDLRRLAHEV 368 Query: 357 ASKRMYPDILNYDQVVKVTGSFK-------TPMGCRSFLGVWENENGEQIHDGRNNLGVI 409 + +R++P+ N D ++ MGCR+ V N G ++ +GR NL Sbjct: 369 SCERLFPNYSNQDASYNAPFYYREEDPQVVAYMGCRT--RVISNRRGPEVTEGRGNLSFT 426 Query: 410 SLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--G 467 S+NLPRIALE + F++ L++ + L L R + KA+ P L +G Sbjct: 427 SINLPRIALETSC-PSDFYQRLEDTIWLVADQLYDRFKIQKNKKAKEFPFLMGQGLYMDS 485 Query: 468 VRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQA 527 +++ + E K+G ++S+G+IG+ E + A+ G H ++E+ KG+ IVE + Sbjct: 486 EDFESEETLEEALKHG--TLSIGFIGLAEALKAMIGEHHG-ESEEAFKKGLQIVEFMDNI 542 Query: 528 VDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNP 587 + E+ FSL +TP+E L RF LD FG + GVTDK +YTNSFH+ VE ++ Sbjct: 543 CKKASEQYNLNFSLLATPAEGLSGRFTELDRETFGEIEGVTDKEWYTNSFHIPVEYSISA 602 Query: 588 YDKIDFEAPYPPLANGGFICYGEYP-NIQHNLKALEDVWDYSYQH-VPYYGTNTPIDECY 645 Y+KI E+ + G I Y E + N+ A E + + + + Y+ N P+D+C Sbjct: 603 YEKIRKESAFNKYTPAGHINYVELDAAPKGNIDAFEQLVNAAMDNDCGYFSVNFPVDQCL 662 Query: 646 ECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARP----------FNAGK 695 C G + TCP CG+ RV RRV GYLG + P FN GK Sbjct: 663 NCANNGVIDSE----TCPVCGSRRIQRV---RRVTGYLGVLEEIPDEEGEGKTSGFNDGK 715 Query: 696 QEEVKRRVKHL 706 E RV HL Sbjct: 716 YHECLNRVSHL 726 >UniRef50_C7MM33 Anaerobic ribonucleoside-triphosphate reductase n=17 Tax=Bacteria RepID=C7MM33_CRYCD Length = 740 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 260/750 (34%), Positives = 393/750 (52%), Gaps = 58/750 (7%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAA----EVDDADYCATVAAVVSEQMQGRNQVDIN 59 V+KR+G +V F +I AI +A + + A V +E + + Sbjct: 2 KVIKRNGSEVIFDVTKIVNAIAKANEEVVPENRLSQAQILTAANNVTTECEACGHAPAVE 61 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 EIQ VE+Q+M+ ++AR YI YR+ ++ +R + +I L+E N + EN+N Sbjct: 62 EIQDMVEDQIMALGCFEVARKYIIYRYLQNQKR-ASNTTDDKILSLIECNNEEVKQENSN 120 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 K+ V+ QRD +AG V+K A + LLP+DVV AHE G IH+HD DY M NC L++ Sbjct: 121 KNPAVVSVQRDYMAGEVSKDLASRMLLPQDVVWAHENGLIHFHDSDYYAQR-MHNCDLVN 179 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 L+ ML G + IE P S STA + QIIAQVAS YGG +I+ LAPFV S Sbjct: 180 LEDMLQNGTVISGTLIEKPHSFSTACNIATQIIAQVASCQYGGQSISLAH--LAPFVDIS 237 Query: 240 YNKHRK--------TAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFV 291 K R+ E + +R E Q+++Y+V TL T NGQ PF+ Sbjct: 238 RQKIRRAVIAELNDLGLEATGDRLDTVVEARVRDEIRRGVQTIQYQVVTLMTTNGQAPFI 297 Query: 292 TFGFGLGTS------WESRLIQESILRNRIAGLGKNR---KTAVFPKLVFAIRDGLNHKK 342 T L + + + E +LR R G+ T FPKL++ + D N + Sbjct: 298 TVFMYLNEARNEQEKHDLAMCIEEMLRQRHQGVKNEAGVWITPAFPKLIYVLEDD-NIEA 356 Query: 343 GDPNYDIKQLALECASKRMYPDILNYDQVVKV---------TGSFKTPMGCRSFLGVWEN 393 P Y + Q+A +C ++R+ PD ++ ++ + G T MGCRSFL + Sbjct: 357 DSPYYYLTQMAAKCTARRLVPDYISEKKMKEYKLSAGEEAGNGDCYTCMGCRSFLTPDRS 416 Query: 394 ENG-------------EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARK 440 NG + + GR N GV+++NL +AL ++GD FW++ DERL L K Sbjct: 417 GNGYNNVANVANWDPTKPKYYGRFNQGVVTINLVDVALSSEGDINKFWEVFDERLELCHK 476 Query: 441 ALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINA 500 AL+ R RL+G + APIL+ GA RL + + ++ G ++ISLGY G++E Sbjct: 477 ALLCRHNRLKGTLSDAAPILWQYGALA-RLEKGETIDKLLYGGYSTISLGYAGLYECTKY 535 Query: 501 LFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAE 560 + G H N + + +++ + + WKEE FSLY TP E+ +F + Sbjct: 536 MTGKSH--TNPEATPFALEVMQHMNDKCNTWKEEHDIDFSLYGTPLESTTYKFSKCLQRR 593 Query: 561 FGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKA 620 FG++ G+TDKGY TNS+H+ V ++++ ++K+ FE+ + PL+ GG I Y E P++Q NL+A Sbjct: 594 FGIIEGITDKGYITNSYHVHVAEEIDAFNKLKFESQFQPLSPGGAISYVEVPDMQDNLEA 653 Query: 621 LEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKG----FTCPKCGNHDASRVSVT 676 + V Y Y ++ Y NT D C CGF GE + CP CGN D ++++V Sbjct: 654 VMKVLHYIYDNIMYAELNTKSDYCQVCGFDGEITIIEDDGKLVWECPHCGNRDQTKLNVA 713 Query: 677 RRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 RR CGY+G+ + +N G+ +E+K RV HL Sbjct: 714 RRTCGYIGT---QFWNQGRTQEIKDRVLHL 740 >UniRef50_D0WIV3 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Bacteria RepID=D0WIV3_9ACTN Length = 740 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 258/750 (34%), Positives = 391/750 (52%), Gaps = 58/750 (7%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAA----EVDDADYCATVAAVVSEQMQGRNQVDIN 59 ++KR+G +V F +I+ AI A + D V + + V + Sbjct: 2 KIIKRNGSEVEFDISKIENAITAANAEVPAAQRLTDRQISYASQNVADACAEAGHAVSVE 61 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 EIQ VE+++M ++AR YI YR+ + ++R+K + +I L+E N + EN+N Sbjct: 62 EIQDLVEDEIMKLDRFEVARKYIIYRYVQGLKRQKNTT-DDKIMALIECNNEEVKQENSN 120 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 K+ V QRD +AG V+K A + LLP+DVV AH G IH+HD DY M NC L++ Sbjct: 121 KNPSVNSVQRDYMAGEVSKDLAMRVLLPKDVVTAHNEGVIHFHDSDYYAQH-MHNCDLVN 179 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 L+ ML G + IE P S STA + QIIAQVAS YGG +I+ LAPFV S Sbjct: 180 LEDMLQNGTVISGTLIEKPHSFSTACNIATQIIAQVASSQYGGQSISL--THLAPFVDVS 237 Query: 240 YNKHRKTAE--------EWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFV 291 + R+ E + R E Q+++Y+V TL T NGQ PFV Sbjct: 238 RQRIRREVLDEINTLGFESSPERVSEVVEKRLRDEIRRGVQTIQYQVVTLMTTNGQAPFV 297 Query: 292 TFGFGLGTSWESR------LIQESILRNRIAGLGKNR---KTAVFPKLVFAIRDGLNHKK 342 T L + + +I E L R G+ T FPKL++ + + N + Sbjct: 298 TVFMYLNEAKDEAEKHDLAMIIEETLAQRYQGVKNEEGIWITPAFPKLIYVLEED-NVSE 356 Query: 343 GDPNYDIKQLALECASKRMYPDILNYDQVVKVT---------GSFKTPMGCRSFLGVWEN 393 G P + + Q+A +C ++R+ PD ++ ++ ++ G T MGCRSFL + Sbjct: 357 GSPYFYLTQMAAKCTARRLVPDYISEKKMRELKLSKGEVEGDGDCYTCMGCRSFLTPDRS 416 Query: 394 ENG-------------EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARK 440 NG + GR N GV+++NLP +AL ++GD FW + +ERL L + Sbjct: 417 GNGYDNVANAGNYEPGTPKYYGRFNQGVVTINLPDVALSSRGDVDAFWDIFEERLELCHR 476 Query: 441 ALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINA 500 AL R RL G + APIL+ GA RL + + ++ G +++SLGY G++E + Sbjct: 477 ALRARHDRLRGTLSDAAPILWQHGALA-RLEKGETIDKLLYGGYSTLSLGYAGLYECVKY 535 Query: 501 LFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAE 560 L G H + +E+ A+++++ +WKE +SLY TP E+ +F + Sbjct: 536 LTG--HSHTDEEATPFAKAVMQKMNDKCAEWKEAEDIDYSLYGTPLESTTYKFAKALQRR 593 Query: 561 FGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKA 620 FGV+ G+TDKGY TNS+H+ V ++++ + K+ FE+ + L+ GG I Y E PN+Q NLKA Sbjct: 594 FGVIKGITDKGYITNSYHVHVAEEIDAFTKLKFESEFQRLSPGGAISYIEVPNMQDNLKA 653 Query: 621 LEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKG----FTCPKCGNHDASRVSVT 676 + V Y Y+++ Y NT D C CG+ GE + G + CP CGN D S ++V Sbjct: 654 VVSVIQYIYENIMYAELNTKSDYCQCCGYDGEIKIVEDGGKLVWECPNCGNRDQSTMNVA 713 Query: 677 RRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 RR CGY+G+ + +N G+ +E+K RV HL Sbjct: 714 RRTCGYIGT---QYWNQGRTQEIKDRVLHL 740 >UniRef50_A6L0X1 Anaerobic ribonucleoside-triphosphate reductase n=24 Tax=Bacteria RepID=A6L0X1_BACV8 Length = 758 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 221/767 (28%), Positives = 359/767 (46%), Gaps = 83/767 (10%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDAD-YCATVAAVVSEQMQGRNQVDINEIQT 63 ++KRDG + F +IK AI +A A+ +D+ D A + V + + EIQ Sbjct: 8 IIKRDGKREDFSISKIKNAIGKAFHASGIDNEDKLIAEITMRVISNFVS-PTISVEEIQD 66 Query: 64 AVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSK 123 VE +LM ++A+ YI YR R+ ER+++ ++ + G+V + NAN S Sbjct: 67 LVEKELMKVR-PEVAKKYIIYREWRNTERDRKTQMKHIMDGIVAIDKNDVNLSNANMSSH 125 Query: 124 VIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGM 183 Q A V K Y ++LLP+ +AH+ GDIH HDLDY P C+ DL + Sbjct: 126 TPAGQMMTFASEVTKDYTYKYLLPKKYAEAHQLGDIHIHDLDYYPT-KTTTCIQYDLDDL 184 Query: 184 LTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKH 243 +GF+ N I P+SI + + I + +GG I D +A V ++ KH Sbjct: 185 FERGFRTKNGSIRTPQSIQSYATLATIIFQTNQNEQHGGQAIPAFDFFMAEGVRKTFRKH 244 Query: 244 RKTAEEWNIP------------DAEGYANSRTIKECYDAFQSLEYEVNTLHTANG-QTPF 290 KT E+ I E A + T K+ + A + + +NT+H+ G Q F Sbjct: 245 LKTLTEFYIEVEGKEPGTEALKKIEEKAYAMTRKDTHQAMEGFIHNLNTMHSRGGNQVVF 304 Query: 291 VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD------ 344 + +G TS E R++ E +L+ I GLG + VFP +F ++DG+++ + D Sbjct: 305 SSINYGTDTSPEGRMVIEELLKATIEGLGTRGEVPVFPIQIFKVKDGVSYSEEDYKKAME 364 Query: 345 --------------PNYDIKQLALECASKRMYPDILNYDQVVKVTGSF-----------K 379 PN+D+ A +K ++P+ + D + Sbjct: 365 NFEAALEGKMEFQAPNFDLFLKACRTTAKALFPNFMFLDTPYNKNEKWDIKDPKRYRYEL 424 Query: 380 TPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAK-----------------G 422 MGCR+ V+EN GE+ GR NL ++N+PR+A+EA+ Sbjct: 425 ATMGCRT--RVYENIAGEKSSLGRGNLSFTTMNMPRLAIEARIKAESLEESGKKEAIERK 482 Query: 423 DEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVRLNADDDVSEIF 480 + F + + L + L R AR P + G +L+ +D V ++ Sbjct: 483 AKEIFIESVHALSELIAEQLYARYQYQRTALARQFPFMMGNDVWKGGGKLSPNDQVGDVL 542 Query: 481 KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFS 540 + G ++ +G+IG H + AL+G H + + A+ E + + D++K++ FS Sbjct: 543 RQG--TLGIGFIGGHNAMMALYGEGHAHSQKAWDTLFEAVTE-MNKVADEYKQKYQLNFS 599 Query: 541 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL 600 + +TP+E L RF R+D ++G++PGVTD YY NSFH+DV++ + +KI EAP+ + Sbjct: 600 VLATPAEGLSGRFTRMDRRKYGIIPGVTDNDYYVNSFHVDVKEPITITEKIKREAPFHAI 659 Query: 601 ANGGFICYGEYP-NIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSK 658 GG I Y E Q N+KA+ + + + Y N P+D C CG+ G Sbjct: 660 TRGGHITYVELDGEAQKNVKAIAKIVKVMHDEGIGYGSINHPVDTCQACGYKGVIY---- 715 Query: 659 GFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 CP C + + R+ RR+ GYL + D +N+ K+ E + RVKH Sbjct: 716 -DKCPVCQSENIMRM---RRITGYL-TGDLSTWNSAKRAEERDRVKH 757 >UniRef50_C4ZF10 Anaerobic ribonucleoside-triphosphate reductase n=29 Tax=Bacteria RepID=C4ZF10_EUBR3 Length = 746 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 272/744 (36%), Positives = 401/744 (53%), Gaps = 51/744 (6%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAA---EVDDADYCATVAAVVSEQMQG-RNQVDIN 59 ++KR G + F + +I AI +A + E AD +A+ V + + + Sbjct: 13 KIIKRSGSEDIFDAAKIVAAIRKANDSVLDYEKLTADQIEEIASNVETACENMKRSPSVE 72 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 EIQ VENQLM+ +AR YI YR+ R I R K +Q+I L+E N + EN+N Sbjct: 73 EIQDMVENQLMNKRAFTVARNYITYRYKRAIVR-KSNSTDQQILSLLECNNEEVKQENSN 131 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 K+ V QRD +AG V+K R+ LLP D+V+AHE+G IH+HD DY M NC L++ Sbjct: 132 KNPTVNSVQRDYMAGEVSKDITRRFLLPEDIVEAHEKGLIHFHDADYFAQH-MHNCCLVN 190 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 L+ ML G + I+ PKS STA + Q IAQ+AS YGG +I+ LAPFV S Sbjct: 191 LEDMLQNGTVISETMIDTPKSFSTACNIATQAIAQIASSQYGGQSISLAH--LAPFVQVS 248 Query: 240 YNKHRKTAEE--------WNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFV 291 K RK ++ + A R +E Q ++Y+V TL T NGQ PF+ Sbjct: 249 REKFRKQVQKEFESVGLDLDEEKINEVAELRVKEEINRGVQMIQYQVITLMTTNGQAPFI 308 Query: 292 TFGFGLG------TSWESRLIQESILRNRIAGLGKNR---KTAVFPKLVFAIRDGLNHKK 342 T L T + I E +L RI G+ + T FPKL++ + D N + Sbjct: 309 TVFMYLNEVSDPQTKADLAAIIEEMLHQRIKGVKNEKGVYITPAFPKLIYVLEDD-NITE 367 Query: 343 GDPNYDIKQLALECASKRMYPDILNYDQVVKVT-GSFKTPMGCRSFLGVWENEN------ 395 +++ LA +C++KRM PD ++ + ++ G T MGCRSFL V Sbjct: 368 DSKYWNLTVLAAQCSAKRMVPDYISEKVMKELKDGDVYTCMGCRSFLTVDRCSQTAGNVA 427 Query: 396 -------GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIAR 448 ++ + GR N GV++LNL +A ++ DE FWK+LDERL L +ALM R R Sbjct: 428 HAENFDPNKRKYYGRFNQGVVTLNLVDVACSSEKDEEKFWKILDERLELCHRALMCRHKR 487 Query: 449 LEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY 508 L G K+ VAPIL+ GA RL + + + NG ++ISLGY G+ E + + G H Sbjct: 488 LLGTKSDVAPILWQNGALA-RLKKGEVIDPLLFNGYSTISLGYAGLCECVRYMKGVSHT- 545 Query: 509 DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVT 568 + ++ + +++RL A +QWK+E+ FS+Y TP E+ +F + FG++ GVT Sbjct: 546 EPKEGTPFALKVMQRLNDACEQWKKESNIDFSIYGTPLESTTYKFAKCLQKRFGIIKGVT 605 Query: 569 DKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYS 628 DK Y TNS+H+ V +++N +DK+ FE+ + L+ GG I Y E PN+Q N+ A+ V Y Sbjct: 606 DKNYITNSYHVHVTEQINAFDKLKFESQFQKLSPGGAISYVEVPNMQDNIPAVLSVMQYI 665 Query: 629 YQHVPYYGTNTPIDECYECGFTGEFECTSKG------FTCPKCGNHDASRVSVTRRVCGY 682 Y ++ Y NT D C CG+ GE + + + CP CGN D +++SV RR CGY Sbjct: 666 YDNIMYAELNTKSDYCQVCGYDGEIKIVEEEGSGKLIWECPHCGNRDQNKMSVARRTCGY 725 Query: 683 LGSPDARPFNAGKQEEVKRRVKHL 706 +G+ + +N G+ +E+K RV HL Sbjct: 726 IGT---QFWNQGRTQEIKERVLHL 746 >UniRef50_A6LHE5 Anaerobic ribonucleoside-triphosphate reductase n=20 Tax=Bacteria RepID=A6LHE5_PARD8 Length = 735 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 217/752 (28%), Positives = 354/752 (47%), Gaps = 65/752 (8%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAA-KAAEVDDADYCATVAAVVSEQMQGRNQVDIN 59 M V+KRDG V F E+I AI +A + +D + +S +G Q+ + Sbjct: 1 MIQTVVKRDGRIVGFNEEKIVTAIRKAMLHTDKGEDMQLIRQITDHIS--FKGEPQMTVE 58 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 IQ AVE +LM+ K +A+ YI YR+ R + R+ + R ++ + + ENAN Sbjct: 59 AIQDAVELELMASSRKDVAQKYIAYRNQRSVARKAKTR--DMFLEIINIKSNDITRENAN 116 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 ++ + K + +LL +V +A +H HD DY P + C+ Sbjct: 117 MNADTPAGMMMKFSSETTKPFVDDYLLSEEVKEAVSNNYLHIHDKDYYPTKSL-TCVQHP 175 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 L +L GF G+ E P K I TA+ + + + ++GG I D LAP+V S Sbjct: 176 LDRILKYGFSAGHGESRPAKRIETASILGCISLETAQNEMHGGQAIPAFDFYLAPYVRNS 235 Query: 240 YNKHRKTAEEWNIPDAE-------------------------GYANSRTIKECYDAFQSL 274 + + KT E+ D +A +RT+ + + ++ Sbjct: 236 FIEEVKTLEDLYGQDFSHLYNKPIDDYQTQTLDGLSGDRRVIQHAINRTVSRVHQSMEAF 295 Query: 275 EYEVNTLHTANG-QTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFA 333 + +NT+H+ G Q F + +G TS E R I +L++ G+G N +TA+FP ++ Sbjct: 296 IHNMNTIHSRGGNQVVFSSINYGTDTSAEGRCIIRELLKSTYRGVG-NGETAIFPIQIWK 354 Query: 334 IRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKT-----------PM 382 + G+++ D NYD+ QLA + ++R +P+ LN D + +K M Sbjct: 355 KKRGVSYLPEDRNYDLYQLACKVTARRFFPNFLNLDATFNQSEDWKADDPQRYIHEVATM 414 Query: 383 GCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEAT------FWKLLDERLV 436 GCR+ V+EN G + GR NL ++N+ R+A+E E F+ LD L Sbjct: 415 GCRT--RVFENRFGPKTSIGRGNLSFSTINIVRLAIECMQVENKEERIALFFAKLDHMLE 472 Query: 437 LARKALMTRIARLEGVKARVAPILYMEGACG-VRLNADDDVSEIFKNGRASISLGYIGIH 495 L + L R+ + A+ P+L G +L +D ++ + G ++ +G+IG+ Sbjct: 473 LTARQLHERMEFQKTAYAKQFPLLMSSLWLGSEKLKPNDSIASVINQG--TLGIGFIGLA 530 Query: 496 ETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCR 555 E + AL G H D E +A GI IV +R +Q+ E+ + +S+ +TP+E L +F Sbjct: 531 ECLVALTGKHHGED-EDSQALGIRIVTYIRDRANQFSEQYQHNYSVLATPAEGLSGKFTG 589 Query: 556 LDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYP-NI 614 D +FG +PG+TD+ YYTNS H+ V K + K + EAPY L GG I Y E + Sbjct: 590 KDRKKFGSLPGITDRDYYTNSNHVPVYYKCSARHKAEVEAPYHDLTRGGHIFYVEMDGDA 649 Query: 615 QHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRV 673 HN +A+ V D + ++ Y N + C +CG+ T CPKCG+ ++ Sbjct: 650 THNPEAIMRVVDMMDKYNIGYGSVNHNRNRCLDCGYE---NSTPNLEACPKCGSKHLDKL 706 Query: 674 SVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 +R+ GYL R +N K E+ R+ H Sbjct: 707 ---QRITGYLVGTTDR-WNNAKLSELNDRITH 734 >UniRef50_B2RKM0 Anaerobic ribonucleoside-triphosphate reductase n=14 Tax=Bacteria RepID=B2RKM0_PORG3 Length = 798 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 215/812 (26%), Positives = 348/812 (42%), Gaps = 123/812 (15%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDAD--YCATVAAVVSEQMQGRNQVDI 58 + ++KRDG F E+I++AI++A +A V + V +V Q V + Sbjct: 4 VILRIVKRDGHVQSFDPEKIRQAIIKAYRAGGVHEEAARIDNIVQSVTDFARQSGELVTV 63 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 +IQ VE +LM +A+ YI YR R +ER+KR + + G+V + NA Sbjct: 64 EQIQDRVEEELMRLNPF-IAKKYIIYREWRTVERDKRTSMKHTMDGIVTIEKNDVNLGNA 122 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 N S Q A V K YA ++LL +AH GDIH HDLDY P C+ Sbjct: 123 NMSSHTPAGQMMTFASEVTKDYASKYLLSLRYSRAHRAGDIHIHDLDYYPT-KTTTCVQY 181 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 D+ + +GF+ N I P++I + + I + +GG I D +AP V Sbjct: 182 DIADLYERGFRTKNGSIRTPQNIHSYATLATIIFQTNQNEQHGGQAIPAFDFFMAPGVRK 241 Query: 239 SYNKHRKTAEEWNIPDAE------------------------------------------ 256 S+ H + + + Sbjct: 242 SFVTHLIERLRFVLELRQPTNTDLSTTLPKAIRNLTPLLTDSPQEAGRLYEGLCSASFPF 301 Query: 257 ---------GYANSRTIKECYDAFQSLEYEVNTLHTANG-QTPFVTFGFGLGTSWESRLI 306 A +T K+ + A + + +NT+H+ G Q F + +G TS E R++ Sbjct: 302 SSTEVEIALATAFRKTRKDTHQAMEGFIHNLNTMHSRGGNQVVFSSINYGTDTSPEGRMV 361 Query: 307 QESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD--------------------PN 346 E +LR GLG + +FP +F +++G+N+ + D PN Sbjct: 362 MEELLRATEEGLGHG-EVPIFPIQIFKVKEGINYSEADVKSALENFDDAMAGKVLFSAPN 420 Query: 347 YDIKQLALECASKRMYPDILNYDQVVKVTGSFKT-----------PMGCRSFLGVWENEN 395 +D+ A +K ++P+ + D + ++ MGCR+ V++N N Sbjct: 421 FDLLLKACATTAKALFPNFVFLDTPFNLHEDWRADDPKRYLQEVATMGCRT--RVFDNVN 478 Query: 396 GEQIHDGRNNLGVISLNLPRIALEAK---------GDEAT--------FWKLLDERLVLA 438 G + GR NL S+NLPR+A+EA+ GD+ T F + + L Sbjct: 479 GPKSSIGRGNLSFTSMNLPRLAIEARHEAEENCPDGDKETIRSEARLLFLESVRRMSTLI 538 Query: 439 RKALMTRIARLEGVKARVAPILYMEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHE 496 L R AR P + G L +++V ++ K+G ++ +G+IG H Sbjct: 539 ADQLYDRYCYQRTALARQFPFMMGNDVWKGGAALEPNEEVGDVIKSG--TLGIGFIGGHN 596 Query: 497 TINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRL 556 + A++G H ++ + + ++K + +S+ +TP+E L RF R+ Sbjct: 597 AMVAIYGEGHAHNKAAWNTL-YDAISVMNDVAQEYKRKYHLNYSVLATPAEGLSGRFTRM 655 Query: 557 DTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYP-NIQ 615 D +G++PGVTD YY NSFH+DV + + +KI EAP+ + GG I Y E + Sbjct: 656 DRKRYGIIPGVTDLDYYVNSFHVDVREPIGIAEKIKCEAPFHAITGGGHITYVELDGEAK 715 Query: 616 HNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVS 674 N+ + + ++ Y N P+D C CGF G CP CG+ +R+ Sbjct: 716 KNVSVILKIVKMMKDENIGYGSINHPVDTCKGCGFKGVIY-----DKCPVCGSDRIARL- 769 Query: 675 VTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 RR+ GYL + +N+ KQ E RVKHL Sbjct: 770 --RRITGYL-TGSLDTWNSAKQAEEHDRVKHL 798 >UniRef50_Q6QGI8 Putative anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Enterobacteria phage T5 RepID=Q6QGI8_BPT5 Length = 574 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 306/623 (49%), Positives = 400/623 (64%), Gaps = 59/623 (9%) Query: 85 RHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQH 144 R+D +E + + + + LL NANK S+ PTQRD+LAG ++K+ + Sbjct: 3 RNDELKYKEMQSLIRNCKEIIEGSADEELLFNNANKPSERFPTQRDMLAGELSKYLILEE 62 Query: 145 LLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTA 204 + P + AH GDIH+HD DY+ M NC L+ L+ ML G K+GNAEI P SI+TA Sbjct: 63 M-PVQIRNAHMIGDIHFHDADYAALG-MTNCCLVALEDMLKNGMKVGNAEISTPNSITTA 120 Query: 205 TAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEG--YANSR 262 A+TAQII QV+SH YGGT+++R+DEVLAP+V SY+K+ A+ W +A+ A Sbjct: 121 AAITAQIITQVSSHQYGGTSVDRLDEVLAPYVRKSYDKNHAFAKRWTKDEAKASVMATEM 180 Query: 263 TIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNR 322 T KE YDA Q LEYE+NT+ +NGQ+PF+TFGFGLGTSWE+RLIQ++IL+ R+ GLG N+ Sbjct: 181 TEKEVYDACQGLEYEINTMFNSNGQSPFITFGFGLGTSWEARLIQKAILKVRMDGLGINK 240 Query: 323 KTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPM 382 +TA+FPKLVF +RDG+N K GD NYDIK+LA++C ++RMYPD ++YD+VV+VTG +K M Sbjct: 241 RTAIFPKLVFVLRDGVNMKPGDVNYDIKKLAMKCTAERMYPDYISYDKVVEVTGDYKVSM 300 Query: 383 GCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKAL 442 GCRSFL E+ GRNNLGV+S+NLPRIA+EA+G+ F+ LL+ R+ A KAL Sbjct: 301 GCRSFLAATED----GETAGRNNLGVVSVNLPRIAIEAEGNIDLFFDLLELRVDTALKAL 356 Query: 443 MTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALF 502 R+ RL+ ++A+ APILYM GA G+RL D+ V Sbjct: 357 EWRVDRLKYIQAKAAPILYMSGAFGLRLGPDEYVF------------------------- 391 Query: 503 GGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG 562 DQ KEET G+SLY+TPSE+LCDRFCRLD F Sbjct: 392 --------------------------DQKKEETKLGYSLYATPSESLCDRFCRLDREYFP 425 Query: 563 VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALE 622 + KGYYTNS HLDVE+KV P K D+E+ + P+A+GG I Y E P+++ ALE Sbjct: 426 EHEDILSKGYYTNSHHLDVERKVAPNVKFDYESNFTPIASGGCISYVELPDMKRFPDALE 485 Query: 623 DVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY 682 V +Y+ V Y+G NTP+D C +CGF GE + GF CP CGNHD + VTRRVCGY Sbjct: 486 WVINYAASKVHYFGINTPVDSCGKCGFLGETVASEDGFKCPICGNHDPETLEVTRRVCGY 545 Query: 683 LGSPDARPFNAGKQEEVKRRVKH 705 LG+P ARPFN GKQ EV RVKH Sbjct: 546 LGNPGARPFNPGKQHEVMGRVKH 568 >UniRef50_C8P1M7 Anaerobic ribonucleoside-triphosphate reductase n=6 Tax=Bacteria RepID=C8P1M7_ERYRH Length = 783 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 221/780 (28%), Positives = 350/780 (44%), Gaps = 89/780 (11%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEV-----DDADYC-ATVAAVVSEQMQGRNQVD 57 ++KRD K+ F E+I AI + + E DDA++ V + E + + Sbjct: 11 TILKRDNQKMKFNGEKIAIAIKKGFDSLESNKYSNDDANHVYMEVLKQIEEIATHEDYIS 70 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIERE----KRGRLNQEIRGL--VEQTNA 111 I IQ +E +L+ Y + ++ +YR+ R+ R+ K+ + + I L E Sbjct: 71 IEHIQDLIERELLRQNYTDVYESFSQYRNRRNESRKIFISKQHKFLKAIEKLNQKEAVEE 130 Query: 112 SLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFP 171 ENAN D V+K +A+ + + D +AH+ G IH HD+D+ P Sbjct: 131 DSKRENANVDGNSPMGMMLQFGSTVSKEFAKAYQMSEDYYEAHDAGQIHIHDMDFLPMG- 189 Query: 172 MFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEV 231 C I+L+ + GF G+ + PK I + A+ A I + +GG +I D Sbjct: 190 TTTCNQINLEQLFENGFSTGHGHLRKPKDIISYAALAAIAIQSNQNDQHGGQSIPAFDYY 249 Query: 232 LAPFVTASYNKHRKT--------------------------------------------- 246 +AP V A++ K K Sbjct: 250 MAPGVLATFKKQFKQKLYDFLEVTEHLEEVDFTKIIKHIDQLPSITVDIQSFEPLMKKDA 309 Query: 247 AEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLH-TANGQTPFVTFGFGLGTSWESRL 305 + A A T + + A ++ + +NT+H A Q PF + FG S E R+ Sbjct: 310 TLMGLLDKAYDKALRTTDRITFQAMEAFIHNLNTMHSRAGAQVPFSSINFGTDISPEGRM 369 Query: 306 IQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDI 365 + E+ L+ GLGK +T +FP +F I++G+N+ DPNYD+ +LA++ ++KR++P+ Sbjct: 370 VMENYLKALDKGLGKG-ETPIFPISIFKIKEGVNYYPEDPNYDLFKLAIKTSAKRLFPNF 428 Query: 366 LNYDQVVKVT-------GSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIAL 418 D + T MGCR+ + + + GR NL S+NL R+ + Sbjct: 429 SFIDSPFNKQYYKDGRYETEITYMGCRTRVMGDVTDPEHEEVTGRGNLSFTSINLVRLGI 488 Query: 419 EA------KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVRL 470 + + D F+K L+ + L + L+ R L +G L Sbjct: 489 KHGILNHEEPDFDGFYKELEHLMDLVKDQLLERFEIQCNKSVSNFKFLLGQGVWKNSKDL 548 Query: 471 NADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQ 530 D++ ++ K+G S++ G+IG+ E + AL G H ++E+ + G+ IV +R D+ Sbjct: 549 KPKDNLRKVLKHG--SLAFGFIGLAECLKALTGSHHG-ESEESQRIGLEIVGFMRDLADK 605 Query: 531 WKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDK 590 + EE FSL +TP+E L RF +D + FG +P VTD+ YYTNSFH+ V ++ DK Sbjct: 606 YTEEEQLNFSLIATPAEGLSGRFVGIDRSIFGSIPEVTDRTYYTNSFHVPVYYDISIKDK 665 Query: 591 IDFEAPYPPLANGGFICYGEYP-NIQHNLKALEDVWDYSYQH-VPYYGTNTPIDECYECG 648 + EAPY L NGG I Y E + NL+A E+V + + + Y N P+D CG Sbjct: 666 LAIEAPYHALTNGGHITYVELDGDTTQNLEAFEEVVRMMHDNEIGYGAINHPVDRDPLCG 725 Query: 649 FTGEFECTSKGFTCPKCGNHDAS---RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 FTG CP CG + RR+ GYL R FN K+ E RVKH Sbjct: 726 FTGIIN-----EECPSCGRLETDGDYGFERIRRITGYLVGTLDR-FNDAKRSEEHDRVKH 779 >UniRef50_Q733N6 Anaerobic ribonucleoside-triphosphate reductase, putative n=91 Tax=Bacteria RepID=Q733N6_BACC1 Length = 619 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 204/622 (32%), Positives = 315/622 (50%), Gaps = 27/622 (4%) Query: 97 RLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHER 156 L + +V L+ ENAN D + A AK+YA ++LL V +A Sbjct: 11 ELMKVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVENLLSDQVKKAINE 70 Query: 157 GDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVA 216 ++ HDLD+ C I L ML GF G+ + P+ I +A A+++ I Sbjct: 71 NILYPHDLDFYATG-TTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALSSIIFQANQ 129 Query: 217 SHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNI--PDAEGYANSRTIKECYDAFQSL 274 + +GG + D LAP+V + +H+K + + + E +A T + Y A ++ Sbjct: 130 NMQHGGQSFALFDVDLAPYVRKTVERHKKRLQSYPLTKEQIEEFAWKETENDTYQACEAF 189 Query: 275 EYEVNTLHTANG-QTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFA 333 + N++H+ G Q PF++ +G TS E RL+ + +L+ AGLGK +T +FP +F Sbjct: 190 IHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLKATQAGLGKG-ETPIFPIQIFK 248 Query: 334 IRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTP------MGCRSF 387 ++ G+N ++ DPNYD+ +LALE ++R++P+ D P MGCR+ Sbjct: 249 MKKGVNFEECDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVCYMGCRT- 307 Query: 388 LGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 V N +GE+ GR NL S+NL ++AL + G + F++ L+ L + + L+ R Sbjct: 308 -RVMSNIHGEETAIGRGNLSFTSINLVKLALIS-GSQEAFFEALNYYLDVGIQQLLERFE 365 Query: 448 RLEGVKARVAPILYMEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGE 505 +AR LY +G G +L +D V+ I K G ++SLG+IG+ E + AL G Sbjct: 366 YQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILKQG--TLSLGFIGLAECLVALTGKH 423 Query: 506 HVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVP 565 H D E + G I+ +R +D+ EE FS+ +TP+E L +F + D EFGV+ Sbjct: 424 HGEDEESWK-LGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVIS 482 Query: 566 GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQ-HNLKALEDV 624 G+T+ YYTNSFH+ V + +KI E P+ L NGG I Y E HN KAL+ + Sbjct: 483 GITNHNYYTNSFHIPVYYDIQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQI 542 Query: 625 WDYSYQH-VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYL 683 ++ V Y N P+D C C + G G CP CGN D + + RR+ GYL Sbjct: 543 VQAMAENGVGYGSINHPVDRCKCCSYHGVI-----GNECPSCGNEDEANIERIRRITGYL 597 Query: 684 GSPDARPFNAGKQEEVKRRVKH 705 D +N+ K+ E RVKH Sbjct: 598 V-GDMSKWNSAKRSEEMDRVKH 618 >UniRef50_A5HXZ1 Anaerobic ribonucleoside-triphosphate reductase n=36 Tax=Clostridium RepID=A5HXZ1_CLOBH Length = 713 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 224/725 (30%), Positives = 361/725 (49%), Gaps = 47/725 (6%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAK--AAEVDDADYCATVAAVVSE-QMQGRNQVDINE 60 +V+KRDG KV F +I AI AA+ A ++ +++ + V+ + + + ++ + + Sbjct: 3 YVVKRDGRKVEFDVVKISNAIKGAAEEIAFDMKESENISLTQKVIKKIEDSNKEEISVED 62 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQ VE+ L+ +K++ AY YR +R RE + L I + +T+ N N Sbjct: 63 IQNLVEHVLIDSGFKEIGYAYSNYRRERTKIREIKSELMTAIEKIGVETDRDNANVGNNF 122 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 SK++ +A K Y ++P+ + + HE GDI+YHDLD + NC+ ID Sbjct: 123 SSKLL-----RIASESNKWYNL-GVMPKHLAKLHENGDIYYHDLD--SYNLTVNCLNIDT 174 Query: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY 240 +L +GF G I PK I +A ++ ++ + ++GG D +A F+ + Sbjct: 175 GRILQRGFNTGYGTINAPKRIESAAELSCILLQSTQNDMFGGQAHVNFDNDMALFIPNTR 234 Query: 241 NKHRKTAEE-----------WNIPDAEGYANSRTIKECYDAFQSLEYEVNTLH-TANGQT 288 ++ RK E N + R + A Q + Y +NT+H A Q Sbjct: 235 SEIRKEILENLKGLEVQEEVLNKEKIDELVEERLRLRIHQAMQGIVYNLNTMHSRAGSQV 294 Query: 289 PFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYD 348 PF + G+ ++ LI E L+ GLGK + +FP ++F +++G+N ++ DP Y Sbjct: 295 PFSSINIGIPKDKDAALICEIFLKEYEKGLGKGEQ-PIFPNIIFRVKEGVNREEKDPYYY 353 Query: 349 IKQLALECASKRMYPDILNYDQVVK----VTGSFKTPMGCRSFLGVWENENGEQIHDGRN 404 + +LA + A KRM P +N D G MGCR+++ N +GE+ GR Sbjct: 354 LFKLAAKIAGKRMNPTFMNMDSDFNKEYYDKGIIPATMGCRTYVC--SNISGEEGPAGRG 411 Query: 405 NLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEG 464 N+ ++NLPR+ + AK D F+ LLD RL LAR++L+ R L+ ++ + P + EG Sbjct: 412 NIAPTTINLPRVGILAKKDINKFFNLLDNRLELARESLLHRYNVLKKLRVKDLPFVVGEG 471 Query: 465 AC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVE 522 L DD + I K G S ++G+IGI ET+ AL G H + E+ + G+ IV Sbjct: 472 LMKGSENLLPDDSIEPILKQG--SWAIGFIGIAETLTALIGSHHG-ETEEAKELGVKIVS 528 Query: 523 RLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVE 582 +R D++KE +S Y+TP+E L +F D FG + GVTDK YYTNS+H+ V Sbjct: 529 HIRDFCDKYKEIDKLNWSCYATPAEGLSGKFILQDKKVFGEIKGVTDKNYYTNSYHIPVG 588 Query: 583 KKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ--HVPYYGTNTP 640 ++ +KI+ EAPY + NGG I Y E + + + + D+ Y+Y+ ++ Y G N Sbjct: 589 FPISIKEKINIEAPYHKICNGGHISYIELDD-YPSEEVIMDIIQYAYRNTNISYMGINFH 647 Query: 641 IDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVK 700 I C ECG + C CG+ + + RV GYL + F +GK E Sbjct: 648 IKYCRECG----TYLGVEEEACNNCGSTNIQGI---SRVTGYLSLDER--FGSGKVAERA 698 Query: 701 RRVKH 705 R + Sbjct: 699 DRTSN 703 >UniRef50_C6JR80 Ribonucleoside-triphosphate reductase n=2 Tax=Fusobacterium RepID=C6JR80_FUSVA Length = 748 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 240/750 (32%), Positives = 380/750 (50%), Gaps = 56/750 (7%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+KR+G V F E+I++ + + K + D + + +++ G ++ + IQ Sbjct: 6 VIKRNGSIVTFNKEKIEKVLEKIDKEVKFIDKVSIEHMMNDIVKKINGNTRMSVEAIQDI 65 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIER-EKRGRLNQEIRGLVEQTNASLLNENANKDSK 123 V L + + A+A+ YR R +R + + + + +V+ + EN+NK+S Sbjct: 66 VFYTLCTNGLFEQAKAFQTYRTQRAEQRLMEANTVFRHMTDIVDVGD----RENSNKNSM 121 Query: 124 VIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGM 183 + QRDL+AG + Y + + +++ AH + IH+HD D + NC L +++ M Sbjct: 122 LPSVQRDLIAGEYFR-YILEKNIDKELWAAHRKKTIHWHDSDVDT--KLTNCCLFNIEDM 178 Query: 184 LTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKH 243 L G ++ NA++ P S+ TA + QI+A +++ YGG ++ +EV A + ++ K+ Sbjct: 179 LRNGTRITNADVCQPNSVGTAMNIAMQIMASISASQYGGVSLPNFNEVFAEYAKKNFKKN 238 Query: 244 R------KTAEEWNI--------------------------PDAEGYANSRTIKECYDAF 271 K + E NI P A RT K+ YDA Sbjct: 239 FMRAYNDKLSTESNISRVTEEDIEKELGEISSGNEKLASEKPVEFQIAKERTAKDIYDAC 298 Query: 272 QSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLV 331 Q EY+ N++ + QTPF T F + TSWES I S L+ R GLG+ A+FPKL Sbjct: 299 QLFEYQTNSILGSASQTPFSTITFNIPTSWESEHIILSYLKVRQTGLGEKHIPAIFPKLS 358 Query: 332 FAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 + + DG N KKGD + I + +C + YPDIL Y + G + MGCRS + Sbjct: 359 YMVVDGYNFKKGDKYFYITEEVAKCIANTYYPDILFYSKEDYDAGKYYARMGCRSRVNHE 418 Query: 392 ENENGEQIHDGRNNLGVISLNLPRIALEAKGDE----------ATFWKLLDERLVLARKA 441 NGE H GR N GV +LN+P+IAL+ DE F +L++R L +KA Sbjct: 419 YQVNGEYQHYGRFNYGVATLNVPQIALDVLKDERYGGAEGNRLERFLDILEKRKELMKKA 478 Query: 442 LMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINAL 501 + TR + ++A+ APIL+ G RL DD V E+ K RAS+S G++G+ + + L Sbjct: 479 IQTRFENVRHLQAKKAPILFQYGGIA-RLEPDDTVEELLKTDRASVSYGFLGLDDAVRIL 537 Query: 502 FGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEF 561 + E+ GIAI++ +R+ D K ETG S+Y TP+E+ F D + Sbjct: 538 SDDKENISTEKGHEMGIAIMKAIRKQADDIKVETGLPVSVYGTPAESSIATFFNKDVENY 597 Query: 562 GVV--PGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLK 619 G + + ++ YYTNSFH E ++ +DKID EAP+ NGG I Y E +N + Sbjct: 598 GEIMPEWLREREYYTNSFHFSSELPIDSFDKIDVEAPFIKYCNGGNIMYVENGGKTYNSQ 657 Query: 620 ALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSK--GFTCPKCGNHDASRVSVT 676 A+ ++ Y++ + Y+ NT D CYECG+TGE K + CP CGN D ++ + Sbjct: 658 AIIELIQYAHDAGIEYFAVNTISDVCYECGYTGEISYNEKTASYKCPHCGNEDGMKMKIQ 717 Query: 677 RRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 RR CGY+ + + G+ +E+K R H+ Sbjct: 718 RRCCGYISNYNITHALEGRMKEIKNRAIHV 747 >UniRef50_C7N7G2 Anaerobic ribonucleoside-triphosphate reductase n=49 Tax=cellular organisms RepID=C7N7G2_SLAHD Length = 816 Score = 609 bits (1571), Expect = e-173, Method: Composition-based stats. Identities = 167/749 (22%), Positives = 296/749 (39%), Gaps = 100/749 (13%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDD-ADYCATVAAVVSEQMQGR---NQVDIN 59 V+KRDG V F ++I AI +A A +A V+ + + +++ + Sbjct: 3 QVVKRDGKIVDFSIDKISVAITKAFDALNKQYHPSVIELIALHVTSDFEDKIVDDKITVE 62 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRL--NQEIRGLVEQTNASLLNEN 117 +IQ +VE L Y +A+AYI YR R+ R L +++ + N + EN Sbjct: 63 DIQDSVEKVLSESGYADVAKAYILYRRQREKVRNVNSALLNYKDLVDNYLKINDWRVKEN 122 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 + V +G + +Y + ++ +AH IH HDL + C Sbjct: 123 STVTYSV-GGLILSNSGAITANYWLSEVYDDEIAEAHRSAAIHLHDLSMLTGY----CAG 177 Query: 178 IDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 LK ++ +G G P +ST + + + G + D LAPF Sbjct: 178 WSLKQLIQEGLGGVPGKITSSPASHLSTLCNQMVNFLGIMQNEWAGAQAFSSFDTYLAPF 237 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF 295 V ++ + KE QS Y VNT Q PF Sbjct: 238 VK---------------------VDNLSQKEVKQCIQSFIYGVNTPSRWGTQAPFSNITL 276 Query: 296 -----------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVF 332 E ++ ++ + I G N + +P + Sbjct: 277 DWTVPNDLKNLNAIVGGKEMDFTYGECQHEMDMVNKAFIDIMIEGDA-NGRGFQYPIPTY 335 Query: 333 AIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE 392 +I N + + N +L E +K P NY ++ M CR L + E Sbjct: 336 SITRDFNWDETENN----KLLFEMTAKYGTPYFSNYINSDMEPSDVRS-MCCRLRLDLRE 390 Query: 393 --NENGEQIHDG--RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIAR 448 ++G G ++GV+++NLPRIA A DEA F+ LD + +A ++L T+ A Sbjct: 391 LRKKSGGFFGSGESTGSIGVVTINLPRIAYLAT-DEADFYARLDHLMDVAARSLKTKRAV 449 Query: 449 LEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHET-INALFGGEHV 507 + + + Y + G F+N ++ +G IG++E +NA + + Sbjct: 450 ITTLLDKGL-YPYTKRYLGT-----------FENHFST--IGLIGMNEVGLNANWLRADL 495 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--P 565 D E+++ ++ +R + ++E G ++L +TP+E+ RF + D ++ + Sbjct: 496 TD-ERVQRFARDVLNHMRNRLSDYQEMYGDLYNLEATPAESTTYRFAKHDKEKYPDIITA 554 Query: 566 GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVW 625 + YYTNS HL V + + +D + L G + + + KA ++ Sbjct: 555 NMNGTPYYTNSSHLPVGYTEDVFSALDIQDDLQTLYTSGTVFHAFLGEKLPDWKAAANLV 614 Query: 626 DYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYL 683 ++ +PYY + C + G+ T + FTCP CG ++ V R+ GY Sbjct: 615 RKIAENYKLPYYTMSPTYSVCKDHGY-----LTGEQFTCPHCG----AKTEVYSRITGYY 665 Query: 684 GSPDARPFNAGKQEEVKRR-VKHLGNGQI 711 + +N GK +E K R V ++G+ + Sbjct: 666 RPV--QNWNDGKAQEYKDRKVYNIGHSTL 692 >UniRef50_B1YME3 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Bacillales RepID=B1YME3_EXIS2 Length = 612 Score = 607 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 203/627 (32%), Positives = 296/627 (47%), Gaps = 29/627 (4%) Query: 96 GRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHE 155 + +VE + + ENAN D K + + LA + AK + LL + QA Sbjct: 1 MDVQTLYEQIVEHPSTDEMQENANVDGKSPLGKLNRLAAVTAKQMMQDMLLSAEAKQALA 60 Query: 156 RGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQV 215 I+ HD DY C+ + L +LT GF M + I P + I +A A+ A I+ Sbjct: 61 ENIIYIHDADYY-VTGTTTCVQLPLGRLLTDGFTMTHGSIRPAQDIRSALALAAIIMQAN 119 Query: 216 ASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEE----WNIPDAEGYANSRTIKECYDAF 271 + +GG + D LAPFV ++ + K E W+ YA S T + Y A Sbjct: 120 QNMQHGGQSYPMFDFDLAPFVEKTFQRQLKKIRELVPKWSNRRKRAYAMSETYELTYQAC 179 Query: 272 QSLEYEVNTLHTANG-QTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKL 330 ++ + N++H+ G Q PF++ +G TS RL+ ++L AGLGK +T +FP Sbjct: 180 EAFIHNTNSMHSRGGGQVPFISINYGTDTSTFGRLLIRALLEATRAGLGKG-ETPIFPIQ 238 Query: 331 VFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSF----KTPMGCRS 386 +F ++ G+N + DPNYD+ QLA E KR++P+ D + MGCR+ Sbjct: 239 IFKVKTGVNFQSEDPNYDLFQLATEVTGKRLFPNFAFLDAPFNQSTGTPDEEVAYMGCRT 298 Query: 387 FLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRI 446 V EN G GR NL SLNL R+AL + + F + + L + L+ R Sbjct: 299 --RVLENRQGRASVVGRGNLSFTSLNLVRLALMTQSLDRMF-EAVTTYTTLICEQLLERY 355 Query: 447 ARLEGVKARVAPILYME-GACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGE 505 A LY G L D V + + G ++S+G+IG+ E + L G Sbjct: 356 HYQANRTADEFTFLYRHIWRGGETLAGSDRVEPVLRQG--TLSVGFIGLAEALIVLTGQH 413 Query: 506 HVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVP 565 H ++E G A++ +R DQ+ E+TG FS+ +TP+E L +F D +FGV+ Sbjct: 414 HG-ESELAHGIGQALIRLIRTIADQYGEKTGLNFSVLATPAEGLSGKFTVADKEQFGVIE 472 Query: 566 GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPN-IQHNLKALEDV 624 VTDK YYTNSFHL V V +KI EAP+ L NGG I Y E + N +A+ED+ Sbjct: 473 RVTDKPYYTNSFHLPVGTNVTIREKIRLEAPFHALCNGGHITYVETDGALAENPEAIEDI 532 Query: 625 WDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYL 683 + + Y N PID C C E CP CG + R+ RR+ GYL Sbjct: 533 VRLMAESGIGYGSINHPIDRCLTCRTEQTMEQ-----ACPVCGGEEIERI---RRITGYL 584 Query: 684 GSPDARPFNAGKQEEVKRRVKHLGNGQ 710 R +N K+ E + RVKH Sbjct: 585 VGTMDR-WNPAKRAEEQDRVKHAAASD 610 >UniRef50_B3EQU4 Anaerobic ribonucleoside-triphosphate reductase n=16 Tax=cellular organisms RepID=B3EQU4_CHLPB Length = 730 Score = 607 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 157/752 (20%), Positives = 272/752 (36%), Gaps = 92/752 (12%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRN---QVDINE 60 ++KRDG V F E+I A+ RA +A D Y A ++A V ++ + + E Sbjct: 12 KIIKRDGKVVSFNREKITFALFRALRATGNPDRQYAAELSAQVVASLEAKRAKEPPSVEE 71 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIERE-KRGRLNQEIRGLVEQTNASLLNENAN 119 IQ VE L A+AYI YR RE K N ++ + ENAN Sbjct: 72 IQDVVEKVLFENCAFDAAKAYIIYRFQHGNMREAKEIFANIDLVDDYLHLKDWRVKENAN 131 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 + ++ IV+ Y L P ++ +AH++G IH HDL + C+ D Sbjct: 132 LSYS-LQGLNHHISSIVSSQYWLNELYPAEIAEAHKQGRIHIHDLGSLSVY----CVGWD 186 Query: 180 LKGMLTQGFKMGN--AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 L+ +LT GF+ + P K + +A + G + D LAPF+ Sbjct: 187 LEDLLTSGFRGVQQQSTSAPAKHLRSALGQIVNFFYTMQGEAAGAQAFSGFDTWLAPFIR 246 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGL 297 + E Q + +N QTPF L Sbjct: 247 ---------------------YDKLEYAEVKQCLQEFFFNMNVPTRVGFQTPFTNVTLDL 285 Query: 298 -----------------------GTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI 334 E + + + G N FP + I Sbjct: 286 LIPAPMRSRQVIIGGEPQDALYGDFQDEMDMFNRAFAEVMLEGDA-NGSVFSFPIPTYNI 344 Query: 335 RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENE 394 + + + E +K P N+ ++ M CR L E + Sbjct: 345 TPDFDWEN-----PVYSDIWEMTAKYGIPYFSNFVNSDMNPDDVRS-MCCRLRLDKRELQ 398 Query: 395 NGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE 450 + G ++GV+++NLP + A E F++ L + +A+ +L + +E Sbjct: 399 SRGGGLFGSDPLTGSIGVVTVNLPELGYLAD-SEEEFFQRLSRVMEVAKSSLEVKRKVIE 457 Query: 451 GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDN 510 + + LY + +R N + + N +++ G +G++E G + Sbjct: 458 RLTEQN---LYPYSSYYLR-NLYRKNGKYWANHFSTV--GLLGMNECCLNFMGCS--IGD 509 Query: 511 EQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDK 570 Q R + +++ +R + ++EETG+ ++L +TP+E R R++ A++ + D+ Sbjct: 510 AQGRLFSLKVLDFMRDRLVAFQEETGHIYNLEATPAEGTSYRLARMNRAKYPDIIVANDR 569 Query: 571 -------GYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALED 623 YYTNS L V + ++ + + GG + + + Sbjct: 570 ASRNGAEPYYTNSSQLPVNYTDDLFEALRLQDEMQIRYTGGTVFHAFLGEENLPAVSARQ 629 Query: 624 VWDY--SYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDA-SRVSVTRRVC 680 + + +PY + C G+ + CP C + S V R+ Sbjct: 630 LVRKITANFRLPYVTLSPTFSICPSHGY-----LAGEHRECPVCRDEGGKSSCLVFSRIV 684 Query: 681 GYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 GYL + +NAGKQ E R G G Sbjct: 685 GYLRPVEQ--WNAGKQSEFHDRKLFDRQGSEG 714 >UniRef50_B8DLP5 Anaerobic ribonucleoside-triphosphate reductase n=15 Tax=Desulfovibrio RepID=B8DLP5_DESVM Length = 704 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 168/742 (22%), Positives = 272/742 (36%), Gaps = 101/742 (13%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 M H+ KRDG + +R+ AI +A KA+ + D +A V ++ G + + + Sbjct: 1 MPQHIRKRDGRVETWSVDRVGHAINKALKASGIKDPLLGKRLAQRVEAKLDGVDMPEQEQ 60 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIER---EKRGRLNQEIRGLVEQTNASLLNEN 117 +Q V+ LM +A YI YR R R E + + I +++ + +NEN Sbjct: 61 VQDLVQRVLMEARLYAVAERYIIYREKRREMRSQNEAYLDVARMIESYLDR-SDWRVNEN 119 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 +N + AG V Y + P ++ AH G H HDL F C Sbjct: 120 SNMGHSFQGLILHM-AGSVQARYVLEK-YPEEIRLAHTHGYFHIHDL---SFGLAGYCAG 174 Query: 178 IDLKGMLTQGFKM-GNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 L+ +L +GF + G P + A + + + G N ID LAPF+ Sbjct: 175 WSLRDLLLEGFNLKGRCCASPARHFDAACGQIVNFLGTLQNEWAGAQAFNNIDTYLAPFI 234 Query: 237 TASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFG 296 + T E Q L Y +NT GQ+PF F Sbjct: 235 RH---------------------DKLTYDEVKQGVQKLVYNLNTTSRWGGQSPFTNFTLD 273 Query: 297 L-----------------------GTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFA 333 + + E + + + + G + + FP + Sbjct: 274 MAPPRHIANEPVIIGGQFQDSTYGDYAAEMDMFNRAFIEVMLEGDA-DGRIFSFPIPTYN 332 Query: 334 IRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSF--LGVW 391 + D +L L +K P N+ ++ M CR L Sbjct: 333 VTPDFPWD-----TDTGKLLLRMTAKYGAPYFQNFINSDLNPEDVRS-MCCRLQMDLREI 386 Query: 392 ENENGEQIHDG--RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARL 449 G G ++GV++LNLP+ A A+G E F ++ E +AR AL + Sbjct: 387 RKRTGGLFGSGDLTGSIGVVTLNLPKFAYLAQG-EEDFLDMITEYAEMARDALEYKRKLC 445 Query: 450 EGV-KARVAPILYMEGACGVRLNADDDVSEIFKNGRASI--SLGYIGIHETINALFGGEH 506 + A + P KNG A ++G IG HE L G Sbjct: 446 TQMLDAGMFPFS----------------RRYLKNGYAGHFSTIGLIGGHEACLNLLGK-- 487 Query: 507 VYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVP- 565 + E ++ LR+ +++EETG+ ++L +TP E C R R+D A + + Sbjct: 488 GIETEAGLRLMKRVLHHLRELTVRFQEETGHMYNLEATPGEGTCYRLARIDRALYEDIAT 547 Query: 566 GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVW 625 D YYTNS L V + + ++ + L NGG + + + ++++ Sbjct: 548 SGGDTPYYTNSTLLPVGFTEDVFAALEHQNELQTLYNGGTVFHSFLGEAAPDEASVKNYL 607 Query: 626 DYSY--QHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYL 683 + +PY C G+ + CP+CG V RV GY Sbjct: 608 LKAMQKTRIPYISVTPTFSVCQSHGY-----LRGEHMNCPECGEEA----EVYTRVVGYY 658 Query: 684 GSPDARPFNAGKQEEVKRRVKH 705 +N GKQ+E K RV++ Sbjct: 659 RPVSR--WNLGKQQEYKERVEY 678 >UniRef50_C6IYT0 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Bacillales RepID=C6IYT0_9BACL Length = 658 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 206/646 (31%), Positives = 318/646 (49%), Gaps = 55/646 (8%) Query: 103 RGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYH 162 +V+ N +L ENAN + + + +K YA +LP +VQA + ++ H Sbjct: 23 EEIVQSRNLEVLRENANLNGESFSGKMSKFGSEYSKWYASHFVLPTRLVQAIQDNIVYVH 82 Query: 163 DLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGG 222 DLD NC+ I +L +GF GN + PP SI TA A+ A I + +GG Sbjct: 83 DLDQYALG-TTNCIFIPFDKLLRKGFNTGNGSVRPPTSIMTAMALVAIIFQSQQNSQFGG 141 Query: 223 TTINRIDEVLAPFVTASYNKHRKTAEEW----------------------NIPDAEGYAN 260 + N++D L P+V S+ K+ + ++ P A YA Sbjct: 142 VSANKLDFDLVPYVAKSFAKYFRKGLDYFEEGDANADLGDITMSRSDLRDQYPKAFNYAL 201 Query: 261 SRTIKECYDAFQSLEYEVNTLH-TANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLG 319 T E + A +SL + +NT+ A GQ PF + +G TS E +L+ +S+L + GLG Sbjct: 202 KETKSETFQAAESLIHNLNTMSSRAGGQIPFTSINYGTCTSPEGQLVIDSLLTATMRGLG 261 Query: 320 KNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFK 379 +T +FP +F + G+N G+PNY + A EC++KR+YP+ N D + + Sbjct: 262 HG-ETPIFPIQIFKCKQGVNQNPGEPNYSLFLKAAECSAKRLYPNFANLDAPLNLMYYDP 320 Query: 380 T-------PMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA--------KGDE 424 T MGCR+ V + G G+ NL +LNL ++ L+ + DE Sbjct: 321 TDPDTEFATMGCRT--RVLADRFGRNRLSGKGNLSFNTLNLVKLGLKYGIALGHRKEPDE 378 Query: 425 ATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVRLNADDDVSEIFKN 482 F++ L + +A + L+ R + KA+ + + EG G +L DD V E+ K+ Sbjct: 379 RGFYRELTHYMNIALEGLLHRFSIQASQKAKASDFMMREGVWEGGEQLAPDDQVGELLKH 438 Query: 483 GRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLY 542 G S+S+G+IG+ E + A++G H D E + K ++ +R D E +L+ Sbjct: 439 G--SLSIGFIGLAECMKAMYGKHHGED-EAVYQKAYDLIAYMRDYCDGQSEIHNLNITLF 495 Query: 543 STPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLAN 602 +TP+E L +F + D A +G +PG+ D+ YYTNSFH+ V ++ KI+ EA + L N Sbjct: 496 ATPAEGLSGKFTKRDRAVYGPLPGILDREYYTNSFHIPVYYNISAARKIELEAKFHGLCN 555 Query: 603 GGFICYGEY-PNIQHNLKALEDVWDYSY-QHVPYYGTNTPIDECYECGFTGEFECTSKGF 660 G I Y E N ++N +A + Y+ Q V Y+ N PID C CGF G G Sbjct: 556 AGAISYIELNGNARNNPEAFVKIVQYALQQQVSYFSINHPIDRCSACGFEGII-----GA 610 Query: 661 TCPKCGNHDAS-RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 +CP CG+H++ + RRV GYL FN KQ EV+ RVKH Sbjct: 611 SCPSCGSHESEVHIRRLRRVTGYLTGDYQTRFNPAKQAEVRDRVKH 656 >UniRef50_A6TN19 Anaerobic ribonucleoside-triphosphate reductase n=23 Tax=cellular organisms RepID=A6TN19_ALKMQ Length = 710 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 165/746 (22%), Positives = 278/746 (37%), Gaps = 92/746 (12%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATV---AAVVSEQMQGRNQVDINE 60 V KR+G V F + +IKEAI AAK+ D + + A + + N + + Sbjct: 5 KVQKRNGEIVDFDAIKIKEAIFSAAKSVGGKDEMTASRLSKLAVDIVSETYAANIPSVED 64 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQ---EIRGLVEQTNASLLNEN 117 IQ VE L+ + + A++YI YR + RE + + V +NEN Sbjct: 65 IQDIVEKVLIEEGHAKTAKSYILYRKKQKDIREVKNLFMDAEVMVEEYVNL-EDWRVNEN 123 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 AN + ++ I K Y + +++ AH +GD+H HDL C Sbjct: 124 ANMGFSLQGLNNHIVESI-TKKYWLNKIYTKELRDAHIQGDLHIHDLGLLA----PYCCG 178 Query: 178 IDLKGMLTQGFKM--GNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 DL+ L GFK G E +PPK +A ++ + G ++ ID LAPF Sbjct: 179 WDLEAFLKDGFKGAKGKVESKPPKHFESALGQLVNLLYTLQGEAAGAQAVSSIDTYLAPF 238 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF 295 + Y + + ++ A Q + +N QTPF Sbjct: 239 I---------------------YYDKMSYEQVKKAIQRFVFNLNVPTRVGFQTPFTNVTL 277 Query: 296 GL-----------------------GTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVF 332 + E L + + G G + FP Sbjct: 278 DITPHELLKKQRVIIGGENMDKNYGEFQKEMDLFNMAFCEVMMEGDGAG-RAFSFPIPTV 336 Query: 333 AIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE 392 I N +E K P N+ ++ M CR L E Sbjct: 337 NITKDFPWDTEVVNA-----IMEMTRKFGTPYFANFINSDMAPEDIRS-MCCRLRLDNRE 390 Query: 393 NENGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIAR 448 G ++ V++LN+ RI +K E F + E + A++ + Sbjct: 391 LRKRGGGLFGANPLTGSINVVTLNMARIGYTSKNMEE-FKSKVRELMQNAKQICEDKRVI 449 Query: 449 LEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY 508 LE + LY +R + E FKN ++ +G G++E L G + Sbjct: 450 LEQY---MDVGLYPYSRYYLR-DVKSATGEYFKNHFST--IGLNGMNEACLNLLGVD--I 501 Query: 509 DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG-VVPGV 567 E+ + I+E + + + ++EETG ++L ++P+E RF RLD + ++ Sbjct: 502 TTEEGNEFAVEIMEFMNRVIQIFQEETGSLWNLEASPAEGAAYRFARLDKKIYPRIITQG 561 Query: 568 TDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDY 627 T++ YYTNS L V + ++ ++ + L GG + +G +++ + + Sbjct: 562 TEEPYYTNSTQLPVNHTKDIFEAVELQEKLQSLYTGGTVLHGFIGEEIESVETCKMLLKR 621 Query: 628 SYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGS 685 ++ +PY C E G+ + + F CP CG V RV G+ Sbjct: 622 VMENSEIPYITITPTFSICQEHGY-----LSGEHFECPHCGKES----EVWTRVVGFHRP 672 Query: 686 PDARPFNAGKQEEVKRRVKHLGNGQI 711 A +N GK+EE K R + + Sbjct: 673 VQA--WNPGKKEEYKDREEFCAEASL 696 >UniRef50_A9KI88 Anaerobic ribonucleoside-triphosphate reductase n=81 Tax=Bacteria RepID=A9KI88_CLOPH Length = 800 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 158/743 (21%), Positives = 289/743 (38%), Gaps = 100/743 (13%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAE-VDDADYCATVAAVVSEQMQGRNQ---VDIN 59 V+KRDG F +I AI +A A + + + D ++ V+ Q + + V + Sbjct: 3 KVVKRDGEIAEFALSKISSAIAKAFNATQKLYNEDIINLLSLRVTSDFQTKLKDSTVTVE 62 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRL--NQEIRGLVEQTNASLLNEN 117 +IQ +VE+ L Y +A+AYI YR +R+ R + + +EI + + + EN Sbjct: 63 DIQDSVEHVLEQSGYTDVAKAYILYRKNREKIRNMKSTILDYKEIVDMYVKEEDWRVKEN 122 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 + V +G + +Y + ++ AH DIH HDL + C Sbjct: 123 STVTYSVGGLILH-NSGAITANYWLSEIYDEEIANAHRSADIHIHDLSMLTGY----CAG 177 Query: 178 IDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 LK ++ +G G P K +ST + + + G + D LAPF Sbjct: 178 WSLKQLIKEGLGGIPGKITSSPAKHLSTLCNQMVNFLGIMQNEWAGAQAFSSFDTYLAPF 237 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFG- 294 V ++ + +E Q Y VNT Q PF Sbjct: 238 VK---------------------VDNLSYEEVKQCIQCFIYGVNTPSRWGTQAPFSNITL 276 Query: 295 ----------------------FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVF 332 E L+ ++ + I G N + +P + Sbjct: 277 DWTVPNDLAELPCIVGGKEMEFKYKDCKKEMDLVNKAFIEIMIEGDA-NGRGFQYPIPTY 335 Query: 333 AIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE 392 +I + + N +L E +K P NY ++ M CR L + E Sbjct: 336 SITKDFDWSDTENN----RLLFEMTAKYGTPYFSNYINSDMEPSDVRS-MCCRLRLDLRE 390 Query: 393 --NENGEQIHDG--RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIAR 448 + G G ++GV+++N+PRIA + +EA F++ LD + ++ ++L + Sbjct: 391 LRKKTGGFFGSGESTGSVGVVTINMPRIAYVS-ANEAEFYQRLDRMMDISARSLKVKRKV 449 Query: 449 LEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHET-INALFGGEHV 507 + + Y + G F N ++ +G IG++E +NA + G+ + Sbjct: 450 ITKLLEEGL-YPYTKRYLGT-----------FDNHFST--IGLIGMNEVGLNARWLGKDM 495 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGV 567 D ++ + + ++ +R + ++ E G ++L +TP+E+ R + D + + Sbjct: 496 TD-KKTQQFSVEVLNHMRDRLGDYQVEFGDLYNLEATPAESTSYRLAKHDRKRWSEIRTA 554 Query: 568 ---TDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDV 624 D YYTNS HL VE + + +D + L G + + + +A + Sbjct: 555 GKEGDTPYYTNSSHLPVEYTDDIFSALDVQDQLQTLYTSGTVFHAFLGEKLPDWEAAAKL 614 Query: 625 WDYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY 682 ++ +PYY + C G+ + F CP+CG + V R+ GY Sbjct: 615 VRTISENYKLPYYTMSPTYSICKNHGY-----IKGESFVCPECG----EKAEVYSRITGY 665 Query: 683 LGSPDARPFNAGKQEEVKRRVKH 705 + +N GK +E K R+++ Sbjct: 666 YRPV--QNWNEGKSQEYKNRIEY 686 >UniRef50_C6BJE1 Anaerobic ribonucleoside-triphosphate reductase n=20 Tax=Bacteria RepID=C6BJE1_RALP1 Length = 687 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 152/699 (21%), Positives = 257/699 (36%), Gaps = 85/699 (12%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 +T V KRDG PF +++I++AI A +A D + + V + I Sbjct: 6 VTGQVTKRDGSLAPFDAQKIRQAIAAAGQATGEFDTIEAQHLTSGVVAHLAPLPCPGIEI 65 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQ VE L+ Y + ARAYI YR R + L + E NAN Sbjct: 66 IQNCVEEVLVDAGYWRTARAYIVYREQHARLRSLKHTLVDVESTMEEYLEQRDWRVNANA 125 Query: 121 DSKVIPTQRDL-LAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 + L +AG V +Y H+ + AH GD+H HDLD + C Sbjct: 126 NQGYSLGGLILNVAGKVTANYWLSHVYSPEAGTAHREGDLHIHDLDMLSGY----CAGWS 181 Query: 180 LKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 L+ +LT+GF G E PP+ +S A + + + G + D +APF+ Sbjct: 182 LRQLLTEGFNGVPGKVEATPPRHMSAAIGQIVNFLGTLQNEWAGAQAFSSFDTYMAPFIR 241 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF-- 295 ++ + + Q L Y +N QTPF F Sbjct: 242 R---------------------DAMSYAAVKQSMQELIYNLNVPSRWGTQTPFTNLTFDW 280 Query: 296 ---------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI 334 E +I + + +AG K+ + FP + I Sbjct: 281 TCPADLREQVPYIGGEEMPFTYGDLQPEMDMINRAYIEVMMAGDAKD-RAFTFPIPTYNI 339 Query: 335 RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENE 394 + + PN L E ++ P N+ ++ M CR L + E Sbjct: 340 TSDFDWEH--PN---TTLLFEMTARYGLPYFQNFLNSDLEPHMVRS-MCCRLQLDLRELL 393 Query: 395 NGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE 450 G ++GV+++N R+ GDEA LD L L R L + ++ Sbjct: 394 KRGNGLFGSAEQTGSIGVVTVNCARLGYLYAGDEAALLARLDTLLALGRDVLEVKRKFVQ 453 Query: 451 GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDN 510 + + LY + +N +++ G GI+E + Sbjct: 454 RLIDQ---GLYPYTRRYL---------GTLRNHFSTL--GVNGINEMVRNFTHDADDITT 499 Query: 511 EQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--PGVT 568 A + +++ +RQ + +++E TG+ ++L +TP+E RF R D + + G T Sbjct: 500 PFGHAMAVRLLDHVRQRMTEFQEATGHLYNLEATPAEGTTYRFAREDRKRWPGILQAGTT 559 Query: 569 DKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYS 628 + YYTNS L V +P++ + + GG + + + +A +++ + Sbjct: 560 AQPYYTNSSQLPVGYTDDPFEALARQEALQSKYTGGTVLHLYMNEAISSPQACKELVRRA 619 Query: 629 YQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKC 665 + +PY C + G+ + CPKC Sbjct: 620 LANFRLPYITITPTFSICPKHGY-----LSGHHTFCPKC 653 >UniRef50_B3QGB6 Anaerobic ribonucleoside-triphosphate reductase n=5 Tax=Bacteria RepID=B3QGB6_RHOPT Length = 673 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 153/714 (21%), Positives = 258/714 (36%), Gaps = 91/714 (12%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR---NQVD 57 + ++KR G + F S +I+ AI RA +A + + + + R Sbjct: 9 LPRAIIKRSGAEAAFASAKIRSAIARAGQATGEFGELEAGLLTSQSVKVIAHRFAGAVPQ 68 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 I +IQ VE L+S + ARAYI YR R R R I + E + + N Sbjct: 69 IEQIQDIVEQVLISANHLTTARAYIVYREKRSQARNDRKVAVDAIASINEYLDRTDWRVN 128 Query: 118 ANKDSKVIPTQRDL-LAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 AN + L L+G V +Y H+ P +V +AH GD+H HDLD + C Sbjct: 129 ANANQGYSLGGLILNLSGKVVANYWLSHVYPPEVGRAHRDGDLHIHDLDMLSGY----CA 184 Query: 177 LIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 234 L+ +LT+G G E PPK +S+A + + + G + D LAP Sbjct: 185 GWSLRMLLTEGLNGVPGKVEASPPKHLSSAIGQIVNFLGTLQNEWAGAQAFSSFDTYLAP 244 Query: 235 FVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFG 294 F+ + + Q L Y +N QTPF Sbjct: 245 FLRKD---------------------GLSYADVLQGIQELVYNLNVPSRWGTQTPFTNLT 283 Query: 295 F-----------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLV 331 F E +I + + G K + FP Sbjct: 284 FDWTCPEDLRDEVPVIGGEEMDFTYGELQPEMDMINRAYMEVMTKGDAKG-RVFTFPIPT 342 Query: 332 FAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 + I + + + E +K P N+ M CR L + Sbjct: 343 YNITPDFPWESEN-----AERLFEMTAKYGLPYFQNFLNSELKPH-MIRSMCCRLQLDLT 396 Query: 392 ENENGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 E G ++GV+++N R+ +GDEA + LD L +AR +L + Sbjct: 397 ELLKRGNGLFGSAEQTGSIGVVTINCARLGHRHRGDEAGLLRALDTLLDIARTSLEIKRK 456 Query: 448 RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHV 507 ++ Y + G +N +++ G G++E I Sbjct: 457 VVQRYMDDGL-FPYSKRYLGT-----------LRNHFSTV--GINGVNEMIRNFTADCET 502 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--P 565 + +++ +R + ++E+TG ++L +TP+E RF + D F + Sbjct: 503 IATPWGHGFAVRVLDHVRARIVAFQEQTGNLYNLEATPAEGTTYRFAKEDRKRFPGILQA 562 Query: 566 GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVW 625 G D YYTNS L V +P++ ++ + GG + + + + +A + + Sbjct: 563 GTEDNPYYTNSSQLPVGFTDDPFEALERQDDLQRKYTGGTVLHLYMGSKLSSGEACKKLV 622 Query: 626 DYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTR 677 + ++ +PY C G+ + CPKC DA R++ R Sbjct: 623 RRALENFRLPYVTVTPTFSICPTHGY-----IEGEHAFCPKC---DAERLAAKR 668 >UniRef50_C5H7Q4 Anaerobic nucleoside diphosphate reductase n=3 Tax=unclassified Myoviridae RepID=C5H7Q4_9CAUD Length = 714 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 214/727 (29%), Positives = 348/727 (47%), Gaps = 46/727 (6%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAE-------VDDADYCATVAAVVSEQMQGRNQV 56 ++K++G +++ A+ ++A V A A + +V Q + Sbjct: 5 QIIKKNGSLEEPDIKKVLAAVAKSANRVGYKELPPDVTQALESAFMRILVKSTKQNNLLI 64 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNE 116 +N+I + VE L + ++ +Y YR+ R + L Q+ + + + E Sbjct: 65 SVNDIHSIVEGALAEVNH-EIYESYSTYRNYRKEVAQNWDELYQKTKDTLFLGD----RE 119 Query: 117 NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 NAN DS +I T+ ++ G + K +Q+ L + ++A E+G I+ HDL F NC Sbjct: 120 NANFDSSLISTKGSIIRGYLTKEIFKQYHLTPEELEAIEKGFIYIHDLR-DLIFGGINCC 178 Query: 177 LIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 L D+ +L GF+M E PKS+ +A V ++ + +GG T+ ID+VL P+ Sbjct: 179 LFDIGKVLKGGFEMSGIEYCEPKSVLSALQVIGDVVLSATAQQFGGFTLAEIDKVLVPYA 238 Query: 237 TASYNKHRKTAEEWNIPDAE--GYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFG 294 S H + A + IP Y + E FQSLE ++NT+ + G F T Sbjct: 239 KKSLRYHAEKASSYGIPKEHYHNYVMEQLQIELTQGFQSLEMKLNTVPCSRGDFAFTTLT 298 Query: 295 FGL---GTSWESR----LIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNY 347 FGL S E +I ++L R+ G GK++K VFPKLV+ I D H + Sbjct: 299 FGLLDSDMSNEDNRLQYMIASTLLDVRMNGQGKSKKPVVFPKLVY-IYDQKRHDENICQG 357 Query: 348 DIKQLALECASKRMYPDILNYD------QVVKVTGSFKTPMGCRSFLGVWENENGEQIHD 401 + A+EC SK MYPD L+ + + +G +PMGCR+FL + NE+GE+ + Sbjct: 358 HLYSKAIECCSKAMYPDFLSVSGHGAVAEAFERSGKVISPMGCRAFLSPYFNEDGEEFYV 417 Query: 402 GRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILY 461 GR N+G +SLNLP I +K + FWK LD+ L + R R + + A P+ + Sbjct: 418 GRANIGAVSLNLPMIYQYSKENGLDFWKELDKYLEMIRNFHKKRYEMIANMPASSNPLAF 477 Query: 462 MEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIA 519 +G G + D +I K+ + S G + E ++ L G+ +++ + Sbjct: 478 TQGGLYKGTKKPTDKVGWDIVKSF--TASFGVTALDE-LSVLAEGKRLHEV-GSYSFTYD 533 Query: 520 IVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHL 579 ++ + +++K E G+ +++Y TP+E+LC + FGV+ GV+DK Y+TNSFH+ Sbjct: 534 VLAYINMKTEEFKNEDGFLYAVYGTPAESLCGTQLKQFRDMFGVIKGVSDKEYFTNSFHM 593 Query: 580 DVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNT 639 +V ++P++K D E P+ + GG I Y N + NL AL+ Y G N Sbjct: 594 NVAADISPFEKQDLEEPFFHICRGGRIQYVRVANPE-NLSALKSCITRGMLKGFYQGLNF 652 Query: 640 PIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARP---FNAGKQ 696 + C CG + + C C +HD +SV RVCGYLG + N K Sbjct: 653 DLAICEHCGNRPKADVEE----CEVCHSHD---ISVINRVCGYLGWTKIKGESRMNDAKI 705 Query: 697 EEVKRRV 703 E++ RV Sbjct: 706 AEIRDRV 712 >UniRef50_A4FZY4 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Methanococcales RepID=A4FZY4_METM5 Length = 791 Score = 550 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 157/709 (22%), Positives = 292/709 (41%), Gaps = 68/709 (9%) Query: 13 VPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSG 72 PF E+I +A+++ A A D +A V +++ + +N + + ++++ Sbjct: 123 EPFNKEKIVKALIQEAGA----DIKTAERIAVEVESEVKN---LTVNYLTAPMIREIVNT 175 Query: 73 PYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLL 132 K + E+RH K RL + +V+ +NAN + + Sbjct: 176 --KLIEHGLEEFRH-------KHTRLGIPVYDIVKLIERGS-KDNANLMHNPESIHK-WV 224 Query: 133 AGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMG- 191 A K +A ++ P+ + +H +GDIH HDL+Y+ + C DL+ G K+ Sbjct: 225 ADETMKQFALLNVFPKYIADSHMKGDIHLHDLEYAAVRTV--CCQHDLRNFFKHGLKVDG 282 Query: 192 ----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTA 247 + +P K A A++++ + GG +I+ + LAP++ + Sbjct: 283 TGRHTSVSKPAKHPDVALQHAAKVLSAAQCEMSGGQSIDEFNIWLAPYMRGLDYNEVRQL 342 Query: 248 EEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT---FGFGLGTSWESR 304 + I + +R + F S+ E+ G+ G +E + Sbjct: 343 MQLFIYEMNQIYAARGGQVV---FSSINLELEVPEFLKGEDAIKAGKVVGAYEEYDYEVK 399 Query: 305 LIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPD 364 LI E+++ + G K +FP ++F +R+ D N D+ E ++K P Sbjct: 400 LIAEALVDVLMDGDA-YGKPFLFPNVIFKLREN---AFKDENKDLMIKIHELSAKWGLPY 455 Query: 365 ILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDE 424 +N + + MGCR+ L + E+ N+ +LNLPRIA EA GD+ Sbjct: 456 FINMLADYQYGNT--NAMGCRTRLSGEWGNSIEESSLRTGNMQWYTLNLPRIAYEADGDD 513 Query: 425 ATFWKLLDERLVLARKALMTRIA--RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKN 482 +++LDE+L LA+ AL + + V P L E D + ++ Sbjct: 514 GRLFEILDEKLSLAKHALEIKHDISKRRLYHDNVLPFLTQE----------FDGEQYYRY 563 Query: 483 GRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLY 542 + + G++G++E + G ++++ + A GI ++ +R+ D K+ETG +++ Sbjct: 564 DSTTKTFGFVGLNELLKYHVG-SELHESPEALAFGIKVISHIRKYADDLKKETGLRWTVT 622 Query: 543 STPSENLCDRFCRLDTAEFGVVPGVTDKG--------YYTNSFHLDVEKKVNPYDKIDFE 594 TP+E+ RF + D + G YYTNS H+ V V +K++ E Sbjct: 623 QTPAESTAGRFAKFDHKYYPEETKSVVNGDLSDLSSIYYTNSSHVKVNADVTLGEKVNIE 682 Query: 595 APYPPLANGGFICYGEYPNIQHNLKALEDVWDYS-YQHVPYYGTNTPIDECYECGFTGEF 653 + L NGG I + N + L D+ + ++ + C +C Sbjct: 683 EKFHELCNGGHIGHFWNAEAYANPEVLMDITRKMTKTDIGFWTYTKNLSICEKCS----L 738 Query: 654 ECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 + C CG+ + + R+ GYL + +N KQ E+ R Sbjct: 739 AMSGLKDNCTGCGSENVEKF---SRITGYLQNVS--NWNKAKQRELIDR 782 >UniRef50_C7NCJ9 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NCJ9_LEPBD Length = 762 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 197/737 (26%), Positives = 313/737 (42%), Gaps = 145/737 (19%) Query: 97 RLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHER 156 L + I G+V + NENAN S Q A V+K YA ++L+ +AHE+ Sbjct: 40 NLREIISGIVNVESNDTCNENANMSSMTPAGQMMKFASEVSKIYALENLVSPKFKEAHEK 99 Query: 157 GDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVA 216 G IH HDLD+ C+ DL M GF + I +SIST + I Sbjct: 100 GLIHIHDLDFYS-SKTTTCLQYDLADMFEHGFYTKHGYIREAQSISTYATLATIIFQTNQ 158 Query: 217 SHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGY------------------ 258 + +GG I D +A V S+ +H + + G Sbjct: 159 NEQHGGQAIPAFDFYMAKGVLKSFRRHLRRRILSFVEIKNGVEITKEYENNAKEFLLKNI 218 Query: 259 ------------------------------ANSRTIKECYDAFQSLEYEVNTLHTANG-Q 287 A T E Y A + + +NT+H+ G Q Sbjct: 219 FSIKCSENEIKLLEENFGINKNDLIKLLLEAYEDTKNETYQAMEGFLHNLNTMHSRGGNQ 278 Query: 288 TPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD--- 344 F + +G TS E R++ +L+ +GLGK+ +T +FP +F +++GLN+ + D Sbjct: 279 VVFSSINYGTDTSEEGRMVIRELLKATSSGLGKS-ETPIFPIQIFKVKEGLNYTENDYNL 337 Query: 345 --------------------------------PNYDIKQLALECASKRMYPDILNYDQVV 372 PN+D+ L+ E +S+R++P+ + D Sbjct: 338 AQSDFDTALESVKNQKISYENDSENEKIKFEAPNFDLLLLSCETSSRRLFPNFVFLDSEF 397 Query: 373 KVTGSFK-----------TPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAK 421 ++ MGCR+ V+EN NGE+ GR NL S+N PRIA+ + Sbjct: 398 NKHEKWRIDDPERYKYEIATMGCRT--RVFENINGEKSSLGRGNLSFTSINFPRIAIITR 455 Query: 422 GDEAT----------------------------FWKLLDERLVLARKALMTRIARLEGVK 453 + F + + E LA + L R + Sbjct: 456 KNVEKEIAEMEKAGKFLNEEEKNNKKIELLTKEFQEKVLETTHLAGEQLYERYNFQKTAL 515 Query: 454 ARVAPIL---YMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDN 510 A+ P + + GV+ + +++V E +G S+S+G++G + ALF EH + Sbjct: 516 AKQFPFMRSNNLWKGLGVK-DGNEEVREAINSG--SLSIGFVGGANAMYALFDAEHG-TS 571 Query: 511 EQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDK 570 E ++++ D+++E+ +S+ +TP+E+L RF R+D EFGV+ VTD+ Sbjct: 572 EIAYKVLYDTIKKMGFVADEFREKYHLNYSILATPAESLAGRFLRIDRNEFGVIKNVTDR 631 Query: 571 GYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYP-NIQHNLKALEDVWDYSY 629 YY NSFH+DV+K+++ +DKI EAP+ L GG I Y E + N+ + + Sbjct: 632 DYYVNSFHIDVKKEISLFDKIRKEAPFHKLTKGGHITYVELDGEARKNMGVMLKIVKVMK 691 Query: 630 Q-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDA 688 + Y N P+D C +CG CP CG+H+ SR+ RR+ GYL + D Sbjct: 692 DTGIGYGSINHPVDRCRDCGTEAIIY-----DKCPICGSHNISRI---RRITGYL-TGDL 742 Query: 689 RPFNAGKQEEVKRRVKH 705 +N+ KQ E RVKH Sbjct: 743 DSWNSAKQAEEHDRVKH 759 >UniRef50_Q0W698 Anaerobic ribonucleoside-triphosphate reductase (Glycyl-dependent) n=2 Tax=Archaea RepID=Q0W698_UNCMA Length = 780 Score = 545 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 161/726 (22%), Positives = 302/726 (41%), Gaps = 70/726 (9%) Query: 10 GCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQL 69 G PF + I+ ++++ + VA V ++ ++ +N + + ++ Sbjct: 98 GTLEPFDYKMIENSLVKET----GITQESAMHVAKEVEAKL---RKLKVNYLSAPLIREI 150 Query: 70 MSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQR 129 ++ QL + + R K RL + + ENAN + Sbjct: 151 VT---VQLLEEGL------EEARSKYTRLGMPVHDVTHLIEQGS-KENANLHHNPETIHK 200 Query: 130 DLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFK 189 + + Y +LP+ + AH RGDIH HD DY P NC+ DL G + Sbjct: 201 -FAGDQILREYLLVQVLPKHIADAHMRGDIHIHDADYFAVRP--NCLQHDLSWFFENGLR 257 Query: 190 MG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHR 244 + + PPK A A+I+A +++ GG +++ + +APF T + Sbjct: 258 VDGTGKHTSVAAPPKHAMVAALHAAKILASSQTNMAGGQSLDNFNIFMAPFFTGMSREEV 317 Query: 245 KTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT----S 300 K + + + +R + F +++ E+ + G +GT Sbjct: 318 KQVAQAFVYEMNMQYVARGGQVV---FSNVDIELTIPKYLADKPAIGPKGKVMGTYKDYQ 374 Query: 301 WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR 360 E +++L I G K +FP ++ RD ++ + SK Sbjct: 375 DELYTFTDALLDVFIDGDALG-KPHLFPNVIVKTRDSAFKDPQQK--ELLFKVHQLFSKY 431 Query: 361 MYPDILNYDQVVKVTGSFKTPMGCRSFL-GVWENENGEQIHDG----RNNLGVISLNLPR 415 P ILN + MGCR+ L G W ++ G + N+ ++NLPR Sbjct: 432 GTPYILNM--LPDWQHDAVNSMGCRTRLSGDWADKQGYENPGMSTMRTGNIHYNTVNLPR 489 Query: 416 IALEAKGDEATFWKLLDERLVLARKALMTRIARLEG--VKARVAPILYMEGACGVRLNAD 473 IALEA G++ +++LD RL L R+AL + ++ + ++ P L +G G Sbjct: 490 IALEANGNDGKIFEILDSRLDLIREALEIKHDLVKKRLYENQILPFLTQKGRHG------ 543 Query: 474 DDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKE 533 + ++ + ++G++G++E + A G +++++ G+ ++ +R D + Sbjct: 544 ---EDYYRFEDLTHTVGFVGLNELVQAHTG-SMLHESQDAYDFGMDVIRYMRDWADSLSD 599 Query: 534 ETGYGFSLYSTPSENLCDRFCRLDTAEFG---VVPGVTDKG--YYTNSFHLDVEKKVNPY 588 TG+ ++L TP+E+ RF RLD FG +V G + G YYTNS H+ V+ ++ + Sbjct: 600 ITGWRWTLTQTPAESTAGRFARLDMKAFGARALVHGDRNTGGVYYTNSSHMPVDADISLF 659 Query: 589 DKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH--VPYYGTNTPIDECYE 646 D+ E + P+ NGG I + + L + + ++ + + + C + Sbjct: 660 DRAKMEGKFHPVCNGGHITHLFLGEGTPDPAGLMSLTEKLCRNTSMGLFDYTRDLTTCRK 719 Query: 647 CGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY---LGSPDA-RPFNAGKQEEVKRR 702 CG +CP C N + + R+ GY +GS D+ +N K E++ R Sbjct: 720 CG----TVAGGLLNSCPNC-NANGKDLEYYSRITGYCQRIGSGDSAGGWNDAKIAELRDR 774 Query: 703 VKHLGN 708 ++ N Sbjct: 775 KRYCIN 780 >UniRef50_D1Z2H8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Euryarchaeota RepID=D1Z2H8_METPS Length = 791 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 164/727 (22%), Positives = 302/727 (41%), Gaps = 73/727 (10%) Query: 10 GCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR-NQVDINEIQTAVENQ 68 G F + I++++++ A D VA VS++++G+ ++ +N + + + Sbjct: 109 GTLERFDPKFIEDSLIKEA--------DLSREVAGHVSKEVEGKLRKLKVNYLTAPLIRE 160 Query: 69 LMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQ 128 +++ E D + + G ++ L+E + ENAN Sbjct: 161 IVTVQL------LEEGLEDARSQYTRLGMPVYDVTQLIEHGS----RENANLHHNPETIH 210 Query: 129 RDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGF 188 + + + Y +LPR + AH RGDIH HD DY P NC+ DL G Sbjct: 211 K-FAGDQILREYLLVKILPRHITDAHLRGDIHLHDADYFAIRP--NCLQHDLSWFFQNGL 267 Query: 189 KMG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKH 243 ++ + PPK A A+I+A +++ GG +++ + +APF T Sbjct: 268 RVDGTGNHTSVAAPPKHAMVAALHAAKILASSQTNMAGGQSLDNFNVFMAPFFTGMSYDE 327 Query: 244 RKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT---- 299 K + + + +R + F ++ E+ + G +GT Sbjct: 328 VKQVAQAFVYEMNMQYVARGGQVV---FSNVNIELTVPPFLRDEPAIGPKGKVVGTYGDF 384 Query: 300 SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASK 359 E ++ E++L + G + K +FP + +RD ++ SK Sbjct: 385 EDELQVFTEALLDVFLDGDARG-KPHLFPNTIVKVRDSAFKDP--KQQEMLLKVHYLFSK 441 Query: 360 RMYPDILNYDQVVKVTGSFKTPMGCRSFL-GVWENENG----EQIHDGRNNLGVISLNLP 414 P ILN + K MGCR+ L G W + G N+ +LNLP Sbjct: 442 YGTPYILNM--LPKWQHGAVNSMGCRTRLSGDWADRQGYTNPRYSTMRTGNIHYNTLNLP 499 Query: 415 RIALEAKGDEATFWKLLDERLVLARKALMTRIARLEG--VKARVAPILYMEGACGVRLNA 472 RIA+EA GD+ +++LD+RL L R++L + +E ++ P L +G G Sbjct: 500 RIAIEANGDDNKVFEILDQRLDLIRESLEIKHELIERRLYDNKLLPFLTQKGQSGEDYYQ 559 Query: 473 DDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK 532 D+ + ++G++G++E G + ++++ G+ +++ +R + Sbjct: 560 FKDL---------THTVGFVGLNEFTKIHIG-KGLHESRDAYDFGMDLIKYMRDWAEFRT 609 Query: 533 EETGYGFSLYSTPSENLCDRFCRLDTAEFG---VVPGVTDKG--YYTNSFHLDVEKKVNP 587 E T + ++L +P+E+ RF +LD EFG +V G +KG YYTNS HL+V+ V Sbjct: 610 EMTDWRWTLTQSPAESTSGRFAKLDLREFGDRAIVKGDKEKGNVYYTNSSHLEVDADVPM 669 Query: 588 YDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH--VPYYGTNTPIDECY 645 +++ E + P+ NGG I + N + L + + ++ + + + C Sbjct: 670 FERARLEGEFHPVCNGGHITHLFLGEGTPNPEGLMSLTEKLCRNTSMGLFDFTRDLTTCK 729 Query: 646 ECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYL-----GSPDARPFNAGKQEEVK 700 C +CP CG A+ + R+ GY G +N K E++ Sbjct: 730 ACA----TVSGGLQKSCPNCGATGAA-LEYYSRITGYCQRIGSGESTTGGWNDAKVAELR 784 Query: 701 RRVKHLG 707 R ++ Sbjct: 785 DRRRYCI 791 >UniRef50_A5UN10 Anaerobic ribonucleoside-triphosphate reductase, NrdD n=5 Tax=Methanobacteriaceae RepID=A5UN10_METS3 Length = 776 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 166/716 (23%), Positives = 301/716 (42%), Gaps = 65/716 (9%) Query: 8 RDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVEN 67 RD F +I ++ A++ + +A V ++++ ++++ + + Sbjct: 103 RD-TIEAFDLSKIANTLIEETGASQ----ETAFEIATEVWKELK---KLNVEYLTAPMIR 154 Query: 68 QLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPT 127 ++++ K + + R + G I L+E N +NAN Sbjct: 155 EMVNT--KLVEYGLEDLR----SRYTRLGIPVYNITSLIENGN----RDNANMIHNPESI 204 Query: 128 QRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQG 187 + +A K YA +LP + AH GDIH HDL++ P+ NCM D++ + G Sbjct: 205 HKH-VADEALKQYALLQMLPSHLADAHMSGDIHIHDLEFFAGRPL-NCMQHDIRTFIKYG 262 Query: 188 FKMG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242 K+ + P + T T +I+ ++ GG ++ + +APF + Sbjct: 263 LKVDGTGDHTSVAGAPNHMETLMNHTGEIMLASQQNMSGGQAMSLWNVFVAPFARGRTYE 322 Query: 243 HRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT--- 299 K + + I + +R + F S+ E T + G +GT Sbjct: 323 EIKQSVQMLIYNLNMAYAARGSQV---PFTSMVLEFGVPKFLQDVTAYGPKGQVVGTYGD 379 Query: 300 -SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECAS 358 E+RLIQ++ +AG + K +FP ++ +R+ KGD D+ L E ++ Sbjct: 380 FEEETRLIQKAFTETLLAGD-QEGKPHLFPNTIYTLRE--ETLKGDYEEDLH-LVHELSA 435 Query: 359 KRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIAL 418 K +N + G MGCR+ L + EQ NL ++LNLPRI Sbjct: 436 KYGSSYFINM--LPDYRGKMANYMGCRTCLQDNWTGDWEQDCLRTGNLAYVTLNLPRIGY 493 Query: 419 EAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSE 478 ++K DE+ ++ LDE + LA + LM R + + +++ G Sbjct: 494 QSK-DESQVFEYLDEYMDLAAETLMLRREQGLKCLNDFHILPFLKQKVGE--------DS 544 Query: 479 IFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYG 538 ++ +++S G++G++E + +LFG +++ G+ +E L + D+ KEETG Sbjct: 545 YYRIQNSTLSFGFVGLNEMLLSLFGK--GIEDKDANKFGVKCIEYLNERADKLKEETGLR 602 Query: 539 FSLYSTPSENLCDRFCRLDTAEFG---VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEA 595 +S+ TP+E+ RF LD +FG +V G YYTNS H+ V V+ DKI E Sbjct: 603 WSVLQTPAESTAYRFATLDKEQFGDQAIVQGDGSANYYTNSSHVPVNTDVSLIDKIKIEE 662 Query: 596 PYPPLANGGFICYGEYPNIQHNLKALEDVWDYS--YQHVPYYGTNTPIDECYECGFTGEF 653 Y L GG I + + +L + + + ++ ++ + C C + Sbjct: 663 QYHSLTPGGHIFHAFMGESYSDPDSLMSLTNKIAKKSDIGFWAYSSALSFCLNC----KT 718 Query: 654 ECTSKGFTCPKCGNHDASRVSVTRRVCGYL-----GSPDARPFNAGKQEEVKRRVK 704 CP CG ++ V R+ GY+ + +N GK++E+ R + Sbjct: 719 LMKGLNNKCPTCG--ESEDVEWYDRITGYVQQVGRAKSSSGGWNPGKRQELIDRRR 772 >UniRef50_UPI0001C41C69 anaerobic ribonucleoside-triphosphate reductase NrdD n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41C69 Length = 780 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 163/717 (22%), Positives = 294/717 (41%), Gaps = 67/717 (9%) Query: 8 RDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVEN 67 RD PF +I ++ A++ + +A+ V ++++ ++++ + + Sbjct: 108 RD-KIEPFDMAKIASTLVEETGASQ----ETAFEIASEVWKELK---KLNVEYLTAPMIR 159 Query: 68 QLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPT 127 ++++ K + + R + G I L+E N +NAN Sbjct: 160 EIVNT--KLVEYGLEDLR----SRYTRLGIPVYNITSLIENGN----RDNANMMHNPESI 209 Query: 128 QRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQG 187 + +A K YA HLLP + AH GDIH HDL++ P+ NC+ D++ + G Sbjct: 210 HK-YVADEALKQYALLHLLPSHLADAHMSGDIHIHDLEFFAGRPL-NCLQHDIRAFIKYG 267 Query: 188 FKMG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242 K+ + PP + T T +I+ ++ GG ++ + +APF + Sbjct: 268 LKVDGTGDHTSVAAPPSHMETLMNHTGEIMLAAQQNMSGGQAMSLWNVFVAPFARGRTYE 327 Query: 243 HRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT--- 299 K + + + + +R + + + Q E + T + G +GT Sbjct: 328 EVKQSIQMLVYNLNMAYAARGSQVPFTSMQ---LEFGVPNFLKDVTAYGPKGQVVGTYAD 384 Query: 300 -SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRD-GLNHKKGDPNYDIKQLALECA 357 E+R+IQ + + G + K +FP ++ +R+ LN D L E + Sbjct: 385 FEDETRMIQRAFTEILLEGDSEG-KPHLFPNTIYTLREETLNGDYDDD----MLLVHELS 439 Query: 358 SKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIA 417 +K +N + G MGCR+ L + EQ NL ++LN+PRI Sbjct: 440 AKYGSSYFVNM--LPDYRGQMANYMGCRTCLQDTWTGDWEQDCLRTGNLAYVTLNMPRIG 497 Query: 418 LEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVS 477 ++ DE ++ LD + LA + LM R IL L+ + D Sbjct: 498 YQSN-DEDDVFEYLDNYMDLAVETLMIRRK-QGLNCLNNFDILPF-------LDQEVDGE 548 Query: 478 EIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGY 537 ++ +++S G+ G++E + ALF + +N GI +E + +EETG Sbjct: 549 TYYRIQNSTLSFGFCGLNEMLLALF--DEGIENPDANKFGIKCLEYINARAKALQEETGL 606 Query: 538 GFSLYSTPSENLCDRFCRLDTAEFG---VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFE 594 +S+ TP+E+ RF LD +FG ++ G YYTNS H+ V + DKI E Sbjct: 607 RWSVLQTPAESTAYRFATLDKEQFGDKAILQGDNGANYYTNSSHVPVNSDIAFADKIKIE 666 Query: 595 APYPPLANGGFICYGEYPNIQHNLKALEDVWDYS--YQHVPYYGTNTPIDECYECGFTGE 652 Y L GG I + + +AL + + + ++ ++ C C + Sbjct: 667 GQYHKLTPGGHIFHAFMGESYSDPEALMSLTNKIARKSDIGFWAYSSAFSFCLNC----K 722 Query: 653 FECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPD-----ARPFNAGKQEEVKRRVK 704 CP CG +++ V R+ GY+ +NAGK++E+ R + Sbjct: 723 TLMKGLSNKCPSCG--ESADVEWYDRITGYVQQVGHAKSANGGWNAGKRQELIDRRR 777 >UniRef50_A8F4B5 Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=cellular organisms RepID=A8F4B5_THELT Length = 589 Score = 521 bits (1341), Expect = e-146, Method: Composition-based stats. Identities = 123/626 (19%), Positives = 246/626 (39%), Gaps = 53/626 (8%) Query: 99 NQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGD 158 + + + EN+N + + +++ I + Y + + + +AH GD Sbjct: 1 MKNMVEQYLLLKDWRIRENSNMNYSLQGLNNHIVSEITS-DYWLKCVYTEKISKAHMEGD 59 Query: 159 IHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGN--AEIEPPKSISTATAVTAQIIAQVA 216 H HDL+ C DL+ +L GF + E +PP+ A + Sbjct: 60 FHIHDLNLLA----PYCCGWDLRDLLINGFGGVDQKIESKPPRHFRVALMQIVNFFYTLQ 115 Query: 217 SHIYGGTTINRIDEVLAPFV---TASYNKHRKTAEEW----NIPDAEGYANSRTIKECYD 269 G + +D +LAPF+ SY + + +E+ N+P G+ + + D Sbjct: 116 GEAAGAQAFSNVDTLLAPFIAYDKLSYQEVVQCLQEFVFNLNVPTRVGF-QTPFVNITMD 174 Query: 270 AFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPK 329 +Y N GQ T+G E + ++ + G + + FP Sbjct: 175 VVVP-KYMANEPVIVGGQFQEKTYG---EFQQEMDMFNKAFCEVMLEGDARG-RVFSFPI 229 Query: 330 LVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLG 389 + + + ++ + L+ +K P N+ ++ M CR L Sbjct: 230 PTYNVTGNFPWES-----EVGYMILQMTAKYGIPYFANFVSSGLSPEDVRS-MCCRLRLD 283 Query: 390 VWENENGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTR 445 E G ++GV+++N+PRI + G E F+K L+ + +A+++L+ + Sbjct: 284 NRELYIRGGGLFGANPMTGSIGVVTINMPRIGYLS-GTEEEFFKRLNSIMEIAKESLIVK 342 Query: 446 IARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGE 505 +E LY ++ + + N ++ +G +G+HE + F + Sbjct: 343 RNAIEKFTE---WGLYPYSKVCLK-KVKKFFGQYWHNHFST--IGLVGMHEALMNFF--K 394 Query: 506 HVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG-VV 564 D + + + +++ +R+ + +++ETG F+L +TP+E R +LD F + Sbjct: 395 RGIDTPEGKTFAMRVLDFMREKLLIFQQETGTLFNLEATPAEGASYRLAKLDKECFKNIY 454 Query: 565 PGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDV 624 ++ YYTNS L V + + + + GG + + + +L + Sbjct: 455 TSGENEPYYTNSTQLPVNYTDDLFRALQIQEDLQLKYTGGTVFHIFLGEKVEDAYSLGAL 514 Query: 625 WDYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY 682 +++ +PY C + G+ G + ++CP CG V RV G+ Sbjct: 515 IKRIFENYRLPYITVTPTFSICRDHGYIG-----GEEYSCPVCGQP----TEVWSRVVGF 565 Query: 683 LGSPDARPFNAGKQEEVKRRVKHLGN 708 + +N GK+EE RV ++ N Sbjct: 566 YRPV--QNWNPGKREEFIHRVNYVVN 589 >UniRef50_C3RPW0 Anaerobic ribonucleoside-triphosphate reductase n=18 Tax=Bacteria RepID=C3RPW0_9MOLU Length = 718 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 204/740 (27%), Positives = 355/740 (47%), Gaps = 63/740 (8%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAA----KAAEVDDADYCATVAAVVSEQMQGRNQV 56 M V+ ++ F +I A+ ++A K+ + D + E +Q ++ Sbjct: 1 MELIVIGKNNQHKKFNKNKILSAVQKSAERLNKSLSKEQEDRLIYLVLRNIENLQI-TEI 59 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYR-HDRDIEREKRGRLNQEIRGLVEQTNASLLN 115 ++ + VE L K +A +Y YR + +D + Q + Q N L Sbjct: 60 PVSTMHKIVEVSL-DDIDKDIATSYRNYRNYKQDFVKMLDNVYKQSV-----QINYVRLK 113 Query: 116 ENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 ENAN DS ++ T++ L+ + K + + L ++A E G I+ HD S NC Sbjct: 114 ENANMDSALVSTKKTLVGNALGKEFYIKEFLNESEIEACEDGYIYIHD--MSSRLDTMNC 171 Query: 176 MLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 L D+ +L+ GF+MGN PK++ A V II+ A+ YGG T+ +D++L + Sbjct: 172 CLFDMDTVLSGGFEMGNRWYNEPKTLDVAFDVIGDIISSTAAQQYGGFTVPEVDKILEKY 231 Query: 236 VTASYNKHRK-------------TAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLH 282 S+NK+ + ++ + YA +T +EC +Q +EY++N++ Sbjct: 232 AQKSFNKYLEEYLSIVQSLLKDTDKKQQFLAKGLQYAYKKTQEECRQGYQGIEYKLNSVS 291 Query: 283 TANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNR--KTAVFPKLVFAIRDGLNH 340 ++ G PFVTF FGL S ++I ++IL G GK+ +FPKLVF L H Sbjct: 292 SSRGDYPFVTFTFGLSKSLLGQMISKTILNVHRIGQGKDGYKTPVLFPKLVFLYDKNL-H 350 Query: 341 KKGDPNYDIKQLALECASKRMYPDILNY------DQVVKVTGSFKTPMGCRSFLGVWENE 394 K Y++ + AL C+SK MYPD L+ + K +PMGCR+FL W Sbjct: 351 GKDKELYEVYKTALLCSSKTMYPDWLSLTGEGYVSNIYKKYRKVISPMGCRAFLSPWYER 410 Query: 395 NG--------EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRI 446 G I+ GR N G ISL+LP I ++ + F+++LD L + R Sbjct: 411 GGMYPADEKDTPIYVGRFNCGAISLHLPMIFEKSLKENKDFYEILDYYLEMIRDIHKRTK 470 Query: 447 ARLEGVKARVAPILYMEGA-CGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGE 505 L KA + P+ + +G G L+ +D+++ + ++ ++ S G ++E + L+ + Sbjct: 471 EHLARKKASINPLAFCQGGFYGGTLDLNDNIAPLLES--STFSFGITALNE-LQELYNNK 527 Query: 506 HVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVP 565 + ++ + ++E + ++Q+K+E +++Y TP+ENLC + ++G++ Sbjct: 528 SLVED---GKFAVEVMEHINNKLNQYKKEDHILYAVYGTPAENLCGVQIKQFRNKYGIIK 584 Query: 566 GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVW 625 V+D+ Y +NSFH V ++++P K + E + L NGG I Y YP + +N+KA+E + Sbjct: 585 KVSDRDYVSNSFHCHVTEEISPIQKQNLEKRFWDLFNGGKIQYVRYP-LNYNIKAMETLI 643 Query: 626 DYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGS 685 + Y G N + C +CG+ + CPKCG+ + +++ R+ GYL Sbjct: 644 LRAMDLGFYEGVNLALSFCDDCGYEQ-----LEMEVCPKCGSKNLTKID---RMNGYLAY 695 Query: 686 PDARP---FNAGKQEEVKRR 702 + N K E+K R Sbjct: 696 SRVKGESRLNDAKMSEIKER 715 >UniRef50_B3E035 Ribonucleotide reductase of class III (Anaerobic), large subunit n=3 Tax=cellular organisms RepID=B3E035_METI4 Length = 611 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 142/644 (22%), Positives = 244/644 (37%), Gaps = 54/644 (8%) Query: 88 RDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLP 147 +D ++ ++ + + ++ + EN+N + L+ ++K Y Q + P Sbjct: 2 QDSPLDESLEPSKLVDDYLSRSCWE-IKENSNMSYS-LQGLNFYLSSKISKSYWLQKIYP 59 Query: 148 RDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKM--GNAEIEPPKSISTAT 205 +V +A ERGD H H+L + CM DL L +GF G E PP STA Sbjct: 60 PEVKEAFERGDFHIHNLQVLGVY----CMGWDLADFLAKGFMGVEGRMESGPPLHFSTAL 115 Query: 206 AVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIK 265 + G + D +LAPF+ K ++ + +R Sbjct: 116 NQVVNFFYTLQGEAAGAQAFSNFDTLLAPFIRYDNLKEKEIRQLLQQFLFNLNVPTRVG- 174 Query: 266 ECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT----SWESRLIQESILRNRIAGLGKN 321 F +L ++N H + + T E ++ + G + Sbjct: 175 -FQAPFTNLTLDLNPPHFLQNEAVLIGGKIKKETYGEFQPEIDILNRLFCEVFLEGDARG 233 Query: 322 RKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTP 381 + FP + I K P D + +K P N+ ++ Sbjct: 234 -RVFTFPIPTYNITSQFPWK--GPAAD---ALWKMTAKYGIPYFANFINSDLKVDDVRS- 286 Query: 382 MGCRSFLGVWENENGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVL 437 M CR L + + G ++GV+++NLPRI +K EA F + L E + L Sbjct: 287 MCCRLRLDLTQLLRRGGGLFGSNPLTGSIGVVTINLPRIGFLSK-SEAEFLERLQELMEL 345 Query: 438 ARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHET 497 A+KAL + LEG A+ LY ++ + N ++ +G IG++E Sbjct: 346 AKKALEAKRKALEGWIAK---GLYPYSKFYLK-GVYQRFGAYWANHFST--IGIIGMNEA 399 Query: 498 INALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLD 557 G + + +A I +++ LR + +++ET ++L +TP+E R R+D Sbjct: 400 CLNFMGKS--IADPEGKAFAIKVLDTLRGTLLAFQKETQNNYNLEATPAEATSYRLARID 457 Query: 558 TAEFGVVPGVTDK-------GYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGE 610 A F + ++ +YTNS L V +P+ ++ + GG + + Sbjct: 458 KAMFPAIRVANEEAVKKGAAPFYTNSTQLPVHFTTDPFVALEHQEELQSRYTGGTVLHFF 517 Query: 611 YPNIQHNLKALEDVWDY--SYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNH 668 +++ S +PY+ C E G+ + + CP+CG Sbjct: 518 LGQKIDEPQSIPPFVQAVCSKYKIPYFTLTPTFSICPEHGY-----LSGEQSRCPRCGKP 572 Query: 669 DASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 V RV GYL D +N GKQEE K R N G Sbjct: 573 ----CEVYSRVVGYLRPLDQ--WNPGKQEEFKLRKTFQFNENRG 610 >UniRef50_B8G1P5 Anaerobic ribonucleoside-triphosphate reductase n=37 Tax=Bacteria RepID=B8G1P5_DESHD Length = 789 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 161/466 (34%), Positives = 254/466 (54%), Gaps = 25/466 (5%) Query: 255 AEGYANSRTIKECYDAFQSLEYEVNTLH-TANGQTPFVTFGFGLGTSWESRLIQESILRN 313 A A + T K+ Y A ++L + +NT+H A Q PF + +G T+ E R++ +++L Sbjct: 322 AVKKALAETDKKTYQAMEALVHNLNTMHSRAGAQIPFSSLNYGTDTTPEGRMVVKNLLLA 381 Query: 314 RIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVK 373 AGLG N +T +FP +F +++G+N+ DPNYD+ QLA ++KR++P+ D Sbjct: 382 TEAGLG-NGETPIFPIHIFKVKEGVNYNPSDPNYDLFQLACRVSAKRLFPNFSFIDAPFN 440 Query: 374 VTGSF-------KTPMGCRSF-LGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEA 425 + MGCR+ +G + + E I GR NL ++NLPR+A+++ Sbjct: 441 LQYYVPGRPETEIAYMGCRTRVIGNIYDPSRETIF-GRGNLSFTTINLPRLAIKSHQSRT 499 Query: 426 TFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVRLNADDDVSEIFKNG 483 F+ +LDE++ L L+ R K + P L +G +L DD++ E+ K+G Sbjct: 500 EFFAMLDEKIDLVINQLLERFEIQARKKVKNFPFLMGQGIWLDSDQLGWDDEIREVLKHG 559 Query: 484 RASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYS 543 ++S+G+IG+ E + L G H ++E+ R G+ IV++LR+ +D+ E G FSL + Sbjct: 560 --TLSMGFIGLAECLMVLTGQHHG-ESEEARELGLEIVQQLRRRMDEAGREYGLNFSLLA 616 Query: 544 TPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANG 603 TP+E L RF ++D FG +PG+TDK YYTNSFH+ V ++ + KI EAPY L N Sbjct: 617 TPAEGLSGRFIKMDRELFGSIPGITDKEYYTNSFHIPVSFPISAFHKITIEAPYHELTNA 676 Query: 604 GFICYGEYP-NIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFT 661 G I Y E + NL+A E + + + + N P+D CG+TG G Sbjct: 677 GHITYVEVDGDPTQNLEAFEKIVRCMKESGIGFGAVNHPVDRDPVCGYTGII-----GNE 731 Query: 662 CPKCGNHDA-SRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 CP+CG ++ + RR+ GYL R FN K+ EV+ R+KHL Sbjct: 732 CPRCGREESTAPFERIRRITGYLVGTLDR-FNDAKKAEVRDRIKHL 776 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 9/289 (3%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ---GRNQVD 57 M + KRDG + PF E+I AI +AA A D +A V ++ + Sbjct: 1 MITKIRKRDGREAPFNIEKIANAIFKAASATGGKDYQSSLLLAEEVVNYLEVNLHKKVPS 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLV--EQTNASLLN 115 + EIQ AVE L+ + + A+ +I YR +R RE RL + L E + + Sbjct: 61 VEEIQDAVEKILIERGHARTAKEFILYRAERTRVREMDTRLMKVYEELTFKEAKDNDMKR 120 Query: 116 ENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 ENAN D AK + +L + +AH+ GDIH HD+D+ C Sbjct: 121 ENANIDGDTAMGTMLRYGSEGAKQFNEMFVLKPEHSKAHKEGDIHIHDMDFLTL--TTTC 178 Query: 176 MLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 ID+ + +GF G+ + P I + +A+ I + +GG +I D +AP Sbjct: 179 CQIDIIKLFKEGFGTGHGFLREPNDIQSYSALACIAIQSNQNDQHGGQSIPNFDYGMAPG 238 Query: 236 VTASYNKHRKT--AEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLH 282 V +Y K + + + + D F +L + +T Sbjct: 239 VAKTYIKLYRQNLLKACELLIHQDVDQEELEAHLKDVFSALANQGHTPT 287 >UniRef50_B7C7M8 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M8_9FIRM Length = 652 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 149/723 (20%), Positives = 275/723 (38%), Gaps = 91/723 (12%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQGR---NQV 56 M V KRDG V F +I AI +A + ++ D + + Q + N++ Sbjct: 1 MIE-VEKRDGSIVDFDPSKIFSAISKAFDSLHMEKDDAIINLLVLRATADFQAKIKENRI 59 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNE 116 + IQ +VE L Y +A+ YI YR R+ R+ + N+ I N+ L N Sbjct: 60 SVEMIQDSVEKTLSESGYYPVAKTYILYRKQRENVRKIQSTANEYIH----LVNSYLHNN 115 Query: 117 NANKDSKVIPTQ-----RDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFP 171 +D + T +G++ +Y + + AH+ GD++ H++ Sbjct: 116 VPLEDENSLATYSVGGLILSNSGMITSNYWLSEVYDAQITNAHKNGDLYIHNIHMLTGCS 175 Query: 172 MFNCMLIDLKGMLTQGFKMGNAEIE--PPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 L+ ++ G N I P K +ST + + + ++ D Sbjct: 176 ----AGWSLEDLILHGLPSVNKMISSLPAKHLSTLCNQMVNFLGIMQNEWASAQSLAHFD 231 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTP 289 +L PF+ + + + K YD +S Y +N Q P Sbjct: 232 TLLVPFI---------------------HKDKLSKKMVYDCLESFIYGINIPSRWGTQAP 270 Query: 290 F--VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLN--HKKGDP 345 F +T + + + +R + +AGL ++ A + + D L KGD Sbjct: 271 FSQITLDWNIPKEFLNR-------KAIVAGLEEDFTYADCQVEMKILHDALFEVLNKGDI 323 Query: 346 NYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNN 405 + Q + D + +++ K + TP E G + G + Sbjct: 324 SGRGFQFPIVALYLHSNFDWMQEEELFKACAKYGTPYFLTQEKQDVEGYFGYKPLCG--S 381 Query: 406 LGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGA 465 +GV++LNL R+A + + F+K LD +A ++ + L L+ G Sbjct: 382 MGVVTLNLVRLAYLSS-SKDDFFKRLDSLSDVAIRSFEVKRQVLNQ--------LFKAGL 432 Query: 466 CGVRLNADDDVSEIFKNGRASISLGYIGIHE-TINALFGGEHVYDNEQLRAKGIAIVERL 524 D ++ + +LG +G++E +NA + + + D + ++ L Sbjct: 433 YPYTKAYISDFNDYYG------TLGVVGMNEACLNAKWLQKDLMDM-HAQKFAQEVLNFL 485 Query: 525 RQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKK 584 Q + ++ +L +TP+E++C F ++D ++ + GYYTNS HLDV Sbjct: 486 NQKISSQAQKL----NLEATPAESVCTHFAKMDKEKYPEIQSF---GYYTNSTHLDVAST 538 Query: 585 VNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLK--ALEDVWDYSYQHVPYYGTNTPID 642 + ++ + + L +G + N K AL Y ++P + Sbjct: 539 DDVFEALRIQQKVQTLYSGATSFPVFMDHGIENWKMAALLVKTIYENYNIPVFTITPTYS 598 Query: 643 ECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 C + G+ K CP C + + RV GY + + +N GKQ+E RR Sbjct: 599 VCADHGY-----VFGKQDVCPIC----QKPLEIYSRVSGYYRNLE--DWNEGKQKEFSRR 647 Query: 703 VKH 705 + Sbjct: 648 KTY 650 >UniRef50_D1B9B6 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9B6_THEAS Length = 709 Score = 477 bits (1228), Expect = e-133, Method: Composition-based stats. Identities = 147/713 (20%), Positives = 281/713 (39%), Gaps = 73/713 (10%) Query: 14 PFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDINEIQTAVENQLMS 71 + RIK A++ A+ D + A++A+ V + + GR++V I+ V +L Sbjct: 44 EWDPVRIKNALILEAQV----DPEVAASIASEVEDDIVRYGRDRVTTRLIREMVNVKLFQ 99 Query: 72 GPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDL 131 + + + G ++ ++ + N N N +S + Sbjct: 100 RGLDA-----------KLADHSQVGLPVSDLETMLLKPNKENSNTTHNPESINLS----- 143 Query: 132 LAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMG 191 +A V K Y+ + DV AH GDIH HDL C + + G + Sbjct: 144 IAERVLKEYSLSKVFSPDVASAHLNGDIHLHDLGM---VNRPYCSGQSIAYVARYGLNIP 200 Query: 192 --NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEE 249 + P K A ++ + + ++ G + ++ AP++ + ++ K + Sbjct: 201 SITSVSAPAKHADVLLAHVLKMTSVLQNNFAGAIGWDAVNMFFAPYMVGATDRQYKQLAQ 260 Query: 250 WNIPDAEGYANSRTIKECYDAFQSLEYEV-NTLHTA-----NGQTPFVTFGFGLGTSWES 303 I + A R + + +L YE+ N G+ T+G ES Sbjct: 261 QLIFEFNQLAGGRGGQVAFTDI-NLYYEIPNHFRDVPAIGPGGEFTGKTYGEY---DQES 316 Query: 304 RLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYP 363 + +++ + G + + FPK + I D + G + +LA AS++ Sbjct: 317 KKFLKALFEVYLEGDSRG-QPFFFPKPLLHITDYFFKEPGWEEF--LELACRVASEKGNT 373 Query: 364 DILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNN---LGVISLNLPRIALEA 420 V G K CR + E + E + L +++NLPR+A A Sbjct: 374 YF-----VFDRGGVAKLSECCRLSFELSEEDLREAHQPWKMRYCALQNVTINLPRLAYRA 428 Query: 421 KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIF 480 KGD+ + L+D+ + L+ KA M + A ++ + L G L D D Sbjct: 429 KGDQEVLFDLVDQYMELSAKAHMQKRAFIKEILD-----LGKRGPLSA-LCVDHDGEAYL 482 Query: 481 KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFS 540 + +AS +G +G++E + + G +++++ +++++ + DQ E G Sbjct: 483 RFHKASHLIGILGVNEMVQVMTG-HELHEDKGALDLALSVIKYMELKCDQLSERYGVKMV 541 Query: 541 LYSTPSENLCDRFCRLDTAEFG-----VVPGV--TDKGYYTNSFHLDVEKKVNPYDKIDF 593 L TP+E+ RF +LD F V+ G T++ YYTNS HL+ ++P ++ Sbjct: 542 LEQTPAESTAHRFAKLDLKTFPEEASRVIKGDFRTNEIYYTNSTHLNYHLALDPIQRVVE 601 Query: 594 EAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH--VPYYGTNTPIDECYECGFTG 651 E + P+ G + + + + ++L + + H + C C Sbjct: 602 EGMFHPMIKAGALTHVWMGEHKPDPRSLSSLVQKIFHHSENAQVAFSPEFTVCNSC---- 657 Query: 652 EFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVK 704 +CP CG+ D + R+ GY + +NAGK+ E++ R + Sbjct: 658 NRVHRGLFESCPTCGSADVDGI---TRITGYFTRTSS--WNAGKRGELRDRSR 705 >UniRef50_A7I0I1 Anaerobic ribonucleoside-triphosphate reductase n=27 Tax=Bacteria RepID=A7I0I1_CAMHC Length = 893 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 144/736 (19%), Positives = 250/736 (33%), Gaps = 134/736 (18%) Query: 47 SEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLN------- 99 +E+ + ++ + +IQ +E +L ++ ++++ YRH ++RE LN Sbjct: 208 NEKTEISCKISVEDIQDMIEKELFKSGNFKVLKSFMLYRHTHKLQREHILGLNDDTTYIN 267 Query: 100 --QEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERG 157 Q I + + + ++ N+N + AG V ++ + ++ AH G Sbjct: 268 STQTINEYINKID-WRISANSNTSYSNAGLINN-TAGKVVANFWLDSVYNKEEGAAHRNG 325 Query: 158 DIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKM--GNAEIEPPKSISTATAVTAQIIAQV 215 D H HDLD + C L+ +L +GF G E + P+ +A A + + Sbjct: 326 DYHIHDLDCLSGY----CAGWSLRVLLNEGFNGVRGRVESKAPRHFYSALYQMANFLGIL 381 Query: 216 ASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLE 275 S G + D LAP+V + + T ++ A +S Sbjct: 382 QSEWAGAQAFSSFDTYLAPYV---------------------FKDKLTDEQIKSAIESFV 420 Query: 276 YEVNTLHTANGQTPFVTFGFGL-------------------------------------- 297 Y +N GQ+PF L Sbjct: 421 YNLNVPARW-GQSPFTNVTVDLTCPDDLKTQIPTVENEHIFKNFKDDELLKEAKKRGKNS 479 Query: 298 -------GTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIK 350 E + I + G K + FP + + + + Sbjct: 480 LTELTYGDFEPEMQRIVIAFYEILTRGD-KCGQPFTFPIPTVNLTENFDWRSA-----AA 533 Query: 351 QLALECASKRMYPDILNYD----QVVKVTGSFKTP----------MGCRSFLGVWENENG 396 + E +K N+ + K P M CR L + E Sbjct: 534 KAIFENTAKVGSSYFQNFIGSQYMIDKNGKKVSNPKAYKPGAVRSMCCRLQLDLRELLKR 593 Query: 397 EQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGV 452 G ++GV+++NL R+ K DE + L+E LA L + + + Sbjct: 594 GGGLFGSAEMTGSIGVVTINLARLGYLYKNDEDALFARLNELCELASGTLEKKRKFITKM 653 Query: 453 KARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQ 512 R LY +R F N ++ +G G +E I + Sbjct: 654 FER---GLYPYTKRYLR---------NFNNHFST--IGINGANEMIKNFTDDKENIATPF 699 Query: 513 LRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--PGVTDK 570 R I+E LR+ + ++E TG ++L +TP+E RF + D F + G + Sbjct: 700 GRKFATKIIEFLREKIKYFQERTGNLYNLEATPAEGTTYRFAKEDKKRFKDIIQAGFGEN 759 Query: 571 GYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ 630 YYTNS L + + +D + GG + + N ++ + Sbjct: 760 IYYTNSTQLPANFTDDVFLALDLQDELQNSYTGGTVFHLYMKEKIQNGNICANLVRKIVE 819 Query: 631 H--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHD-ASRVSVTRRVCGYLGSPD 687 + +PY C+E G+ + CP C + SR V RV GY + Sbjct: 820 NYRLPYITITPIFSVCHEHGY-----IAGEHEFCPVCEQENKKSRCMVYTRVMGYYRPIE 874 Query: 688 ARPFNAGKQEEVKRRV 703 + FN GK E K R+ Sbjct: 875 S--FNTGKIGEHKERI 888 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 51/117 (43%), Gaps = 7/117 (5%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAE--VDDADYCATVAAVVSEQMQGRNQVDINEI 61 ++KRDG F +I++AI +A ++ DD Y A ++ ++ + Q + + Sbjct: 3 KIIKRDGSLENFMPFKIQDAIKKAFESENYVFDDKIYQAIISRIILDDEQNLDANNTERK 62 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 Q ++ + YK + + R+ L+++ + Q + ++ N+N Sbjct: 63 QNL---EISNKKYKN--EKFQNLADNLGDNRKNNQNLSEKNENEISQNDETIQNKNG 114 >UniRef50_C7ZMN2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7ZMN2_NECH7 Length = 833 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 114/608 (18%), Positives = 230/608 (37%), Gaps = 55/608 (9%) Query: 112 SLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFP 171 ++EN+N ++ + Y + ++ + H HDL + + Sbjct: 21 WKVSENSNSTYSH-QGLMQYVSNHIISQYWLDKIYTEEIRKYDSENRFHIHDLGFLSAY- 78 Query: 172 MFNCMLIDLKGMLTQGFKMGNAEI--EPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 C ++ +L QGF +I PPK ++TA + + + G ++ D Sbjct: 79 ---CSGWSIEDILLQGFGGVENKIQCRPPKHLNTALNQIVNFLFTLQGELAGAQALSSFD 135 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDA-FQSLEYEVNTLHTANGQT 288 LAPF+ + + E + + Y+ + + + A F +L ++ Q+ Sbjct: 136 TYLAPFIRSD---NLSYVEVFKYLQSFVYSLNVPTRSGFQAPFTNLSLDLICPSRLGDQS 192 Query: 289 PFVTFGF-----GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKG 343 + E ++ ++ + G G N FP + + +G++ + Sbjct: 193 VIIGGELHEEWIYSDFQEEMDILNKAFAEVMMQGDG-NGNIFSFPIPTYNLCEGIDWE-- 249 Query: 344 DPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDG- 402 P + + E +K P N+ F++ M CR L + + G Sbjct: 250 SPRW---KSIWEMTAKYGVPYFANFINSDLDPEDFRS-MCCRLRLDLSKLHCRVGGQYGA 305 Query: 403 ---RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPI 459 ++GV+++NLP +A + G + TF L + L +A+ +L + ++ A Sbjct: 306 SPLTGSIGVVTVNLPNLAYRSNGSKETFLAELSDTLRVAKDSLEIKRKLVDSNAA----- 360 Query: 460 LYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIA 519 LY A + + N ++ +G G++E + ALFG + + + Sbjct: 361 LYPYAAHYLS-ATKGRTGSYWTNHFST--IGVNGMNEAVVALFG----ETIAKQKMFALE 413 Query: 520 IVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHL 579 +++ +++ + +++ ETG ++L ++P+E+ C +F R D F P +YTNS L Sbjct: 414 VLDFIKERLQEFQNETGNLYNLEASPAESTCYKFARQDKILF---PDRKIPTFYTNSTML 470 Query: 580 DVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDY--SYQHVPYYGT 637 V+ + ++ + + GG + + K ++ S +PY Sbjct: 471 PVDTTEDLFEALAHQEDLQCSYTGGTVFHAFLGERLPEWKLARNLIKLLTSRFRIPYITL 530 Query: 638 NTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQE 697 C G+ + C CG V R+ GY R +N GK E Sbjct: 531 TPTFSICKTHGYRA-----GEEPECLLCG----ESCLVYSRIVGYFRPT--RDWNKGKSE 579 Query: 698 EVKRRVKH 705 E R + Sbjct: 580 EFTARKVY 587 >UniRef50_Q8TWY0 Oxygen-sensitive ribonucleoside-triphosphate reductase n=1 Tax=Methanopyrus kandleri RepID=Q8TWY0_METKA Length = 591 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 144/623 (23%), Positives = 247/623 (39%), Gaps = 53/623 (8%) Query: 102 IRGLVEQTNASLLNE--NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDI 159 + G+ E+ L NAN + +H+ +H+L +AH G I Sbjct: 1 MTGIPEEVLEEPLRVARNANMLPTPEVISKIFQDRWQKRHF-LKHVLDGKTARAHLEGYI 59 Query: 160 HYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGN------AEIEPPKSISTATAVTAQIIA 213 H HDLDY+ NC D + +L G N +P K A + + Sbjct: 60 HIHDLDYA--LTRSNCCQHDCRWVLKYGLYARNPIGRLTCVSKPAKHAEVAVLHILKWLM 117 Query: 214 QVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQS 273 + GG + ++ ++AP++ + + + I E + AF + Sbjct: 118 TSQNFFAGGQGQDFVNFLVAPYIAEEGLSYEEIRQLAQIMMFEA-TQDLVARGGQPAFTN 176 Query: 274 LEYEVNTLHTANGQTPFVTFGFGLGT----SWESRLIQESILRNRIAGLGKNRKTAVFPK 329 + E+ + G +GT E+ + ++L ++ G FP+ Sbjct: 177 VNLELTCPDFLEDEPAVGPGGEIVGTYGDFEEEAIMFARALLDVQLEGDAAGA-PLKFPQ 235 Query: 330 LVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVV--KVTGSFKTPMGCRSF 387 ++ +R G + + +LA E A++ N K+ G MGCR+ Sbjct: 236 IIVKVRPGYDKE-------TLELAFEVAAENGAVYFANMLNRDWRKLVGDNVNYMGCRTC 288 Query: 388 LGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 L + E N ++LNLP +A E++ DE F + + E +AR+AL+ A Sbjct: 289 LATNWTGDWEIDTIRTGNFEYVTLNLPLLAHESR-DEDEFLEKIREYCEVAREALL---A 344 Query: 448 RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHV 507 R VK + LY R D F+ + SLG++G+ E I L G Sbjct: 345 RWRCVKKCLEAGLY---DGCQRWKPD--GEYYFRYEHTTWSLGFVGLAEAIEVLTGYGFW 399 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGV--VP 565 D +R ++E L +++ E G +S+ +P+E+ +R R ++ V Sbjct: 400 EDPSAMR-LAERVLEELNDVREEFHERDGRRWSVVQSPAESAAERLARKYLEKYPDAKVR 458 Query: 566 GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY---GEYPNIQHNLKALE 622 G + Y TNS H+ ++ VN ++ + EA + P+ GG I + GE + + +K Sbjct: 459 GTEHRPYLTNSCHVPYDEDVNVVERAEIEAKFHPMTLGGHITHFWLGERTDPRSLMKLTV 518 Query: 623 DVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY 682 V + + C C T E CP+CG R ++ RV GY Sbjct: 519 RVLR--RNTIGFLAITRDYSVCDRCQRTYEGVVEQ----CPECGR----RCTIWSRVTGY 568 Query: 683 LGSPDARPFNAGKQEEVKRRVKH 705 L D+ F GK++E K R++H Sbjct: 569 LAPVDS--FVDGKKQEHKERLRH 589 >UniRef50_Q0TSL9 Anaerobic ribonucleoside-triphosphate reductase n=7 Tax=Clostridium perfringens RepID=Q0TSL9_CLOP1 Length = 603 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 134/652 (20%), Positives = 245/652 (37%), Gaps = 95/652 (14%) Query: 86 HDRDIEREKRGRL--NQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQ 143 + RD++++ + L + + +++ + +NEN+N + ++A V+K Y Sbjct: 7 NKRDVKKDVKNMLSSKKIVDDYIKKID-WRVNENSNSPYSFGSLNKHIIA-EVSKDYWLN 64 Query: 144 HLL-PRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGF-KMGNA-EIEPPKS 200 + + ++ A++ GD+H HDL + C L+ ++ G + N P K Sbjct: 65 EVYKDKRIIDAYKNGDMHIHDLGGLTLY----CCGYSLRNIILMGVQGIPNIPTSSPAKH 120 Query: 201 ISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYAN 260 A ++ + I G N D +LAP++ Sbjct: 121 FDAILNQIANLVTIYQNEIMGAVAFNSFDTLLAPYIKKD--------------------- 159 Query: 261 SRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGL----------------------- 297 + T +E Q+ + +N+ A + F F L Sbjct: 160 NLTYEEVKQNLQNFIFSINSNSRAGAEPAFTNITFDLFPPKDLENDPALIGDKIQEFTYK 219 Query: 298 GTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECA 357 E ++ ++ G N + +P + I + +PN D + E Sbjct: 220 ECQKEMDMLNKAFYELMNEGD-YNGRPFSYPIPTYNINSNFDF--DNPNND---MLFEMT 273 Query: 358 SKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE--NENGEQIHDG--RNNLGVISLNL 413 K YP N+ ++ M CR L + E NG G ++GV+++NL Sbjct: 274 GKFGYPYFANFVNSDMDQSDVRS-MCCRLNLDLRELRKRNGGLFGSGDSTGSIGVVTINL 332 Query: 414 PRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNAD 473 PR+A + K +E F+ L E L++A+ +L + L + G Sbjct: 333 PRLAYKHKNNEKEFFNALKEILIIAKDSLEKKRKWLNDNIINKDMLPAFSTYVGT----- 387 Query: 474 DDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKE 533 KN ++ +G +G++E G E+ I + +R+ + ++E Sbjct: 388 ------LKNHFST--IGIVGLNEMCENFNGNN--ILTEEGMEFSIKVCNFIREELINFQE 437 Query: 534 ETGYGFSLYSTPSENLCDRFCRLDTAEFG--VVPGVTDKGYYTNSFHLDVEKKVNPYDKI 591 ETG ++ +TP+E+ C R + D +F +V G + YYTNS H+ + N Sbjct: 438 ETGNLYNFEATPAESTCYRLAKKDVEDFEDIIVRGGREYPYYTNSCHMPPNEVKNLKQLF 497 Query: 592 DFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFT 650 D + L GG + + K+ V + PY + C E G+ Sbjct: 498 DHQDKLQVLFTGGTVVHIYCDGAISGEKSKHIVNTVCKKYRTPYVSISPLNRYCKEHGYV 557 Query: 651 GEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 E + CP CG ++ + +R+ GYL + FN GK+ E K R Sbjct: 558 KE-----RVEECPICG----KKLDLYQRITGYLRKVE--FFNDGKKSEFKDR 598 >UniRef50_C9RJ61 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ61_FIBSS Length = 542 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 154/595 (25%), Positives = 268/595 (45%), Gaps = 63/595 (10%) Query: 114 LNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMF 173 +NE AN + + V K + P + H +G IH HDL++ + + Sbjct: 1 MNELANIQKNTMSSILG-AGEKVCKSAVLDGI-PERFAEFHRQGYIHIHDLEF--YDKTY 56 Query: 174 NCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLA 233 NC+ + + ++ +I+ +ST + I + ++ GG D +A Sbjct: 57 NCIGVSVSDLVKD------TDIQ----VSTVLRRLYRGIVSLTNNQSGGIGFLDFDGDMA 106 Query: 234 PFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTF 293 Y + + +AF++ ++N + P+ T Sbjct: 107 -----------------------AYRMDESDEILTEAFRNFFEDLNIYSRKGCEKPYTTL 143 Query: 294 GFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLA 353 G TS ++R I +++L + G K +FP +VF +N + PNYDI Q+A Sbjct: 144 NIGCRTSTKARRIAKAVLSAALEG-NSEGKPFIFPNIVFKYSRAINGTESSPNYDIFQMA 202 Query: 354 LECASKRMYPDILNYDQVVKVTGSFKTP--MGCRSFLGVWENENGEQIHDGRNNLGVISL 411 L+ + RM P N D + MGCR+ V + +G R N+ ++ Sbjct: 203 LKGTASRMIPTYFNCDAPFNRNANPNKIGIMGCRT--RVVADIHGNTTGLNRGNIACVTT 260 Query: 412 NLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLN 471 NL R+A+++ D F K + ++ L+ R A L +PI +E G+ L+ Sbjct: 261 NLVRLAIDSNHDFQVFLKKIGTLFEECKELLLHRFATLCK---GTSPIFAIEK--GLYLD 315 Query: 472 ADDDVSEIFKNGRASISLGYIGIHETINALFGGE--HVYDNEQLRAKGIAIVERLRQAVD 529 ++ +G ++S+G+IG+ + ++ L + V + K +A+++ +RQ VD Sbjct: 316 SEKGREVALMHG--TLSIGFIGLWDALSELLDTDFSDVDNLRMHHGKALAVLQVMRQKVD 373 Query: 530 QWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYD 589 + E++ FSL ++ +E F D E+G+ KG+YTNSFH+ V+ + ++ Sbjct: 374 SFIEQSHMNFSLLASAAEATTGIFADRDFKEYGIQCKSAAKGFYTNSFHIPVDTSIRLFE 433 Query: 590 KIDFEAPYPPLANGGFICYGEYPN-IQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYEC 647 KI EAP+ L NGG I Y E +N+ A++ V +++ + + Y+G N P+D+C C Sbjct: 434 KIQLEAPFHKLCNGGCISYVELDEQPCYNVGAIQKVVEFAMKNNCNYFGINFPLDQCNAC 493 Query: 648 GFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 G G G TC CG+ D R+ RRV GYL + R F GK+ E+ R Sbjct: 494 GHFGRI-----GDTCSSCGSSDILRL---RRVSGYLS--EKRAFTKGKKRELNLR 538 >UniRef50_C8W489 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W489_DESAS Length = 1197 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 143/431 (33%), Positives = 226/431 (52%), Gaps = 20/431 (4%) Query: 280 TLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLN 339 A Q PF + G TS SR + ++L AGLG+ + +FP ++F +++G+N Sbjct: 780 HNSRAGAQVPFSSLNLGTETSEASRKVTRNLLMAYEAGLGRG-ENPIFPNIIFRVKEGIN 838 Query: 340 HKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVT-GSFKTPMGCRSFLGVWENENGEQ 398 DPNYD+ ++AL ASKR+ P D G + MGCR+ V N +G+ Sbjct: 839 LNPDDPNYDLFKVALRVASKRLNPTFSFMDAGFNSPFGDQVSYMGCRT--RVMSNRHGQA 896 Query: 399 IHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAP 458 + DGR NL ++NLPR+A++A+ + A F++ L++ L+ + L R +K R P Sbjct: 897 VTDGRGNLSFTTVNLPRVAIKAERNMAKFYRDLEDIFDLSARQLYHRYQVQAKLKVRDMP 956 Query: 459 ILYMEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAK 516 + +G L +D + K+G ++++G+IG+ ET+ AL G H +++ + Sbjct: 957 FVMGQGLYMDSQGLRPEDVIEPAIKHG--TLAIGFIGLAETLTALTGKHHG-ESKSAQEI 1013 Query: 517 GIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNS 576 G IV + + VD+ E+ ++ +TP+E L RF +LD E+G++PGVT+K YYTNS Sbjct: 1014 GQEIVAFMAKKVDEAAEKYDKNYTFLATPAEGLSGRFIKLDRREYGIIPGVTNKEYYTNS 1073 Query: 577 FHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQ-HNLKALEDVWDYSYQ-HVPY 634 FH+ V ++ +DKI E Y N G I Y E HN++A+E + + ++ Y Sbjct: 1074 FHIPVNYPISIFDKISLEGVYHKYCNAGHISYVELEAPPVHNIEAMESIVRHMKDSNMGY 1133 Query: 635 YGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAG 694 N P+D C C G CP+CG+ RV RR+ GYL + D FN Sbjct: 1134 AAINYPVDFCTGCSHLGVI----NEDICPRCGSPFIRRV---RRITGYLSTVDR--FNDS 1184 Query: 695 KQEEVKRRVKH 705 K E+K R+ H Sbjct: 1185 KVSELKERITH 1195 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 83/289 (28%), Positives = 141/289 (48%), Gaps = 33/289 (11%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR---NQVD 57 M + KRDG +V F ++I +AI RAA++ +D + V + ++ + N Sbjct: 1 MFNTIKKRDGREVSFDDKKITDAIFRAARSVGGEDRQLAMELTIEVLKMIKAKYNGNAFG 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 + ++Q VE L+ + + A+AYI YR R RE +G L + ++ +T+ EN Sbjct: 61 VEDVQDIVEKVLIENGHARTAKAYILYRDRRTRMREAKGELMDAVEEILVETS----KEN 116 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 AN S + +A +K Y L+P ++ QAH RGDIH HDLD+ + C+ Sbjct: 117 ANV-SNSPSAKMLQIASAASKKYYLTRLIPDELSQAHTRGDIHIHDLDF--YGKTLTCIQ 173 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 I LK +L +GF G+ I PP+ ++ATA+ A I+ + ++GG + D +AP+V Sbjct: 174 IPLKRLLEEGFDNGHGYIRPPQRPNSATALAAIILQSSQNDMHGGQSFAFFDRDIAPYVE 233 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANG 286 + + E + A ++L Y +N++H+ G Sbjct: 234 NA-----------------------SEDETFQAMEALVYNLNSMHSLRG 259 >UniRef50_Q12U66 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12U66_METBU Length = 604 Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 136/634 (21%), Positives = 243/634 (38%), Gaps = 45/634 (7%) Query: 85 RHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQH 144 + + I+ N+ I ++ LL ENAN +A + K YA ++ Sbjct: 5 KEEASIDHLDFKDTNELIDDVL-YNRNWLLKENANTRFSPSVIDMH-VASQIKKRYALEN 62 Query: 145 LLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTA 204 L ++V +AH +G+IH HDL +PF P C ID + L G K ++ P K A Sbjct: 63 LYSKEVAKAHTKGNIHIHDLS-NPFKPY--CNGIDARIFLLDGLKFPDSRSSPAKRFDAA 119 Query: 205 TAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTI 264 + G I+ + +LAP + S + + + ++R Sbjct: 120 IYHAMSFMLHSKHFFAGAQAIDMFNWLLAPHLHYSDIDEEELLQIVQGFMFQMNQSNRIG 179 Query: 265 KECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT----SWESRLIQESILRNRIAGLGK 320 AF ++ +N + + F T E+R I + + G Sbjct: 180 --AQSAFTNIGLRINCPSSLANELAVYGGEFIEKTYSCFEKEARAIYGAFMDIAAKGDAD 237 Query: 321 NRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKT 380 FP + AI ++ + + + + S P LN + + Sbjct: 238 GL-PFTFPLITTAITKDIDTED-----TLWKRTMYATSSTGAPYFLNLTT-DYLEENTTQ 290 Query: 381 PMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARK 440 M CR L G + ++++NLPRIALEA+ + F+K LDE L + RK Sbjct: 291 AMCCRL-LARHSGGVWTAGGMGSGSNKIVTVNLPRIALEAE-NRDRFFKRLDEILEITRK 348 Query: 441 ALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINA 500 AL+ + LY L ++ F + ++ G +G++E + Sbjct: 349 ALLEGQEIVRRS-------LYEWKILPWLLQRTENDLPYFDHSSRHLTFGTVGLNECLLN 401 Query: 501 LFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAE 560 L G + + + G+ I+ + ++ + + G ++ TP+E+ R LD + Sbjct: 402 LTGQDMI----EQHDLGMEIIRHMLGKIETYSIQDGIEYTFEQTPAESTAHRLATLDRSA 457 Query: 561 FGV---VPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHN 617 +G V G D YYTNS H+ K++ ++I E+ + P GG I + + Sbjct: 458 YGEKAHVQGSHDAAYYTNSTHVPYSSKISLAERIKIESRFHPYFTGGTISHIWMGESFPD 517 Query: 618 LKALEDVWDY-SYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVT 676 + + ++ + S + Y+ + C CP C V Sbjct: 518 PEGMSELIEKLSGTDLAYFCFSPDFTVCEN-----RHVSRGMNLKCPVCNEPAVDHV--- 569 Query: 677 RRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQ 710 RV GY G + +N GKQ+E + R +++ + Sbjct: 570 SRVTGYFGHVEQ--WNPGKQKEYEERHRYILQSK 601 >UniRef50_A1RX14 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RX14_THEPD Length = 639 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 132/687 (19%), Positives = 218/687 (31%), Gaps = 127/687 (18%) Query: 93 EKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQ 152 +++ L +++ NENAN + + L +V LP ++ Sbjct: 6 QQKKSLVRDLEESYLAGIDWERNENANHNVSYSNFRNYLFEKLVKSKEVLSEYLPPLAIE 65 Query: 153 AHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQII 212 H RGDIH H L S + P C K +L G K P + TA A Sbjct: 66 QHYRGDIHIHKLPDSLWIPY--CAGWSYKKILQLGLKTPTIISAPARHFDTAVAHLVNFF 123 Query: 213 AQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQ 272 A G ++ D +APF + + Q Sbjct: 124 FMGAQEWTGAQAVSAFDLFVAPFAEGD---------------------GLSKERIKQTLQ 162 Query: 273 SLEYEVNTLHTANGQTPFVTFGFGLGTSWESRL----------------------IQESI 310 + +E+N A Q+PF + TS + + E++ Sbjct: 163 GMLFELNYPARAGYQSPFTNITLVMDTSKDMLEGEAIVAGKKAGSLGDYIEKALAVDEAL 222 Query: 311 LRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQ 370 G + FP + + G ++ S++ +LN Sbjct: 223 FELYAEGDAAG-QPFTFPIPTIMLTKNFDWN-GRRWGELTDKIFTALSRKGSAYLLNGYA 280 Query: 371 VVKVTGSFKTPMGCRS---------------------------------FLGVWENENGE 397 M CR F+ EN Sbjct: 281 S---NVEALYAMCCRLTIDVNHVMGKSGNGSPSFSLKLSRADEEDAFEKFMKSRENSRTY 337 Query: 398 QI---HDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKA 454 I D ++GV++LNLPR+A +KG+ F +LLD L AR L+T R E A Sbjct: 338 GIWALPDATGSIGVVTLNLPRLAALSKGEWPLFEELLDSLLKNARDVLLTWRKRYEKTLA 397 Query: 455 RVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY------ 508 L F + + +G IG+ E V+ Sbjct: 398 AGLMPLT------------KTYLGHFNHHFNT--IGVIGLPEAAANFMRNPKVWFEGGVG 443 Query: 509 DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGV----- 563 + ++ +V +R+ + +E GY +++ P E+ + D F Sbjct: 444 ELQEAVEIEKKMVSLIRERASELEERDGYLYNVEEIPGESTGYKLALADLQLFKEEHARG 503 Query: 564 ---VPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKA 620 +P +Y+NS + V Y + +E GG + + + Q + KA Sbjct: 504 EVLIPSDGKAPFYSNS-VVPYYADVPMYQRAIWEGYVQQEFTGGVMMHLFL-HEQPDPKA 561 Query: 621 LEDVWDYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRR 678 L ++ + V Y+ I C +CG + CP CG+ + V R Sbjct: 562 LRNLVYRIATNTKVVYFSITPTITVCRKCGRSTTGYLDG----CPHCGSSE---VEHWSR 614 Query: 679 VCGYLGSPDARPFNAGKQEEVKRRVKH 705 + GY +N GK+ E K RV + Sbjct: 615 IVGYYRPVS--NWNPGKKAEFKLRVTY 639 >UniRef50_A2BJ51 Ribonucleotide reductase, oxygen sensitive (RNR, class III) n=10 Tax=Archaea RepID=A2BJ51_HYPBU Length = 636 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 131/673 (19%), Positives = 231/673 (34%), Gaps = 132/673 (19%) Query: 108 QTNASLLNENANKDSKVIPTQRDLLAGIVAKHY--ARQHLLPRDVVQAHERGDIHYHDLD 165 + + + ENAN+ P LL + K + +LP + +AH G ++ H L Sbjct: 18 EASVFDVFENANR----YPGPSGLLTYVAEKALRPVVRSVLPEPLARAHLDGRVYVHKLP 73 Query: 166 YSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTI 225 Y+ F P C ++ +L +G K P + T + + + G Sbjct: 74 YALFIPY--CSGHSVERLLRRGLKTPTITARPARHFDTFVDHVTNYLIAMQHYFSGAQAF 131 Query: 226 NRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTAN 285 ++ PF+ +E Q L + +N Sbjct: 132 GAVELYAGPFIRRDR---------------------LGYREIRQGVQRLIFNLNFPSRVG 170 Query: 286 GQTPFVTFGFGLGTSW-----------------------ESRLIQESILRNRIAGLGKNR 322 QTPF F L + E+RL ++ + G Sbjct: 171 MQTPFTNFTVVLDAAETKLERDDAIYAGEPVGKLGEYLDEARLFVRALYEVHMEGDVAG- 229 Query: 323 KTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPM 382 + FP L + DP +I A++R LN +VV SF M Sbjct: 230 RPFTFPIPTIMTTSKLLY--DDP--EIFDAVFGAAARRGTGYWLN-TRVVDPNASF--AM 282 Query: 383 GCRSFLGVWENENGE------------------------------------QIHDGRNNL 406 CR + + E + + D + Sbjct: 283 CCRINIDMNELRHALRVGGKSMRIRDIRRELEQAREEYIRSLEKQHMGGLWAMPDITGSK 342 Query: 407 GVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC 466 VI++NLPRIALEA+ D+ F + LDE L L R L R E + A+ P Y Sbjct: 343 VVITVNLPRIALEARRDDEAFVEKLDETLALVRSGLEWFARRYERL-AKAYPEFYSM--- 398 Query: 467 GVRLNADDDVSEIFKNGRAS--ISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERL 524 + V E + ++ + +G IG+ E + G + E R++ + E + Sbjct: 399 -----VLEYVPEALRLMGSTYFLPVGVIGLSEAAAIMAGDPKAW-TEGSRSQWFRMAEWM 452 Query: 525 RQAVD-------QWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVT---DKGYYT 574 ++ V+ +W ++TG F++ P E+ R D F + ++ Y+ Sbjct: 453 KKTVEHIVSRTREWSKKTGIPFNVEEVPGESAAARLAERDVQLFPELREYLPDPEEPIYS 512 Query: 575 NSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDY--SYQHV 632 S + +++++ E P+ GG I + + + +AL + + + Sbjct: 513 TSI-APYYAPMELWERVEVEERVQPVFTGGVIMHIFLGE-EPDPEALASLTRKLAANTSL 570 Query: 633 PYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFN 692 Y+ + C CG++ T TCP+CG + R+ GY R +N Sbjct: 571 VYWSYTPALSVCPRCGWSSVGIRT----TCPRCGGE----TEIWSRIVGYYRPL--RNWN 620 Query: 693 AGKQEEVKRRVKH 705 ++ E R + Sbjct: 621 PARRREFWLRHHY 633 >UniRef50_Q1PZG5 Similar to oxygen sensitive ribonucleoside triphosphate reductase NrdD n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZG5_9BACT Length = 812 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 131/716 (18%), Positives = 273/716 (38%), Gaps = 81/716 (11%) Query: 14 PFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSGP 73 P+ ++ A+ + A ++ V+ EI + VE ++ S Sbjct: 130 PWDKRKVAVALEKEAD------------ISGEVA-----------EEIASVVEQRVFSSG 166 Query: 74 YKQLARAYIEYRHDRDI-EREKRGRLNQE-IRGLVEQTNASLL----NENANKDSKVIPT 127 +++ + I D ++ ER +L ++ + G+ + L+ EN+N + Sbjct: 167 LNRISTSLIRELVDNELFERGYSKKLEKQAVLGMPKYDLDELILSKNKENSNIATNNPEA 226 Query: 128 QRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQG 187 +A K YA Q + ++V +AH G +H HDL Y C L+ + G Sbjct: 227 INLAIAENTLKQYALQEVFSKEVSEAHLSGMVHLHDLGYP---TRVYCSSHSLEYLKKYG 283 Query: 188 FKMGN--AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRK 245 + N + P K T T +A + ++ G + I+ + AP++ ++ K Sbjct: 284 LSLENLDTDSAPAKHARTLTGHLNTFLASMQAYYAGALGVGYINIMYAPYLEGMSHQEMK 343 Query: 246 TAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNT--LHTANGQTPFVTFGFGLGT---- 299 + I A SR + + L++ ++T G G Sbjct: 344 QEAQHLIFSCSQSAFSRGGQTLF-----LDFNIHTGIPGYLKDIPAIGPGGKPTGKTYGE 398 Query: 300 -SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECAS 358 + +R ++L G FPK F I + K Y++ + A + AS Sbjct: 399 YAETARRFTLAMLDVWREGDCYGH-VFAFPKCDFHINE--ESFKDPKQYELLEYACQIAS 455 Query: 359 KRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRN-NLGVISLNLPRIA 417 + P + + ++ CR + +N + R I++NLP+ + Sbjct: 456 ENGVPYFVFDRDEITLSA------CCRLRTTIDDNYMIKHPESMRFCGFQNITINLPQAS 509 Query: 418 LEA-KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDV 476 +A KG+ +K +D+ + +A KA + + + + + L+ G D Sbjct: 510 YKAGKGNWDALYKEIDKAIEIAVKAHLQKKKFISKLMSGPEMPLWEIGKKA------KDG 563 Query: 477 SEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETG 536 ++ +G IG++E + + G + +++ + + +G+ +V + V + ++ Sbjct: 564 RPYVDLEASTYIVGIIGLNECLQFMTG-KELHEGDDMIRQGLRVVSHMYTRVKEAGKKHK 622 Query: 537 YGFSLYSTPSENLCDRFCRLDTAEFG----VVPGVTDKG--YYTNSFHLDVEKKVNPYDK 590 FSL +P+E+ R ++D F VV G ++ YYTNS HL + V+ + Sbjct: 623 LKFSLEESPAESASRRLAKVDMRNFPEAADVVKGNDERDGLYYTNSIHLRPDAPVDMITR 682 Query: 591 IDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYY--GTNTPIDECYECG 648 I ++ + + G I + + ++ ++ ++++ + C +C Sbjct: 683 IYLQSKFHTMIESGAIIHAFVGEERPPASSILNLVKKTFKNTQAAQVTISPEFTICNDC- 741 Query: 649 FTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVK 704 + C CG+ + + R+ GY + +N K E+ R K Sbjct: 742 ---KKVTKKLTDICGYCGSRNVYGI---TRIVGYFSRIN--NWNKSKISELADRHK 789 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR---NQVD 57 M +V+KRDG PF ++I +AI +AA+A +D +A VVS + + N Sbjct: 4 MIEYVVKRDGRTAPFVEKKIADAIFKAAQAVGGNDRALAEELAVVVSMFLAKKYNGNPPG 63 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 I IQ VE L+ + + A+AYI YR R R+ R+ ++ + V+ T+ SL+ + Sbjct: 64 IENIQDVVEKVLIETGHAKTAKAYIIYRDKRARIRD-SLRVRKQSQKRVDTTDVSLMVDT 122 Query: 118 ANKDSKVI 125 KD Sbjct: 123 ETKDETFP 130 >UniRef50_C5A351 Anaerobic ribonucleoside triphosphate reductase (NrdD) n=2 Tax=Thermococcus RepID=C5A351_THEGJ Length = 617 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 123/672 (18%), Positives = 224/672 (33%), Gaps = 118/672 (17%) Query: 93 EKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQ 152 E I+ ++ +L ENAN+ ++ + + L+P++ + Sbjct: 3 EMETMKRDIIQEYAGWSSLDVL-ENANRYPGPTGFFAYVMEEALKESL---SLVPKEGRE 58 Query: 153 AHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQII 212 AH GDI+ H L YS + P C +L +G K P + T A + Sbjct: 59 AHFSGDIYIHKLPYSLYIPY--CTGHSTARLLEKGLKTPTIVSRPARHFDTYVDHIANYL 116 Query: 213 AQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQ 272 + + G ++ ++ PF+ ++ Q Sbjct: 117 ITMQHYFSGAQALSSVEWYAGPFIRK---------------------EGLDRRKIRQQIQ 155 Query: 273 SLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILR-NRIAGLGKNRK-------- 323 L Y +N QTPF F L + ++ R+ LG+ + Sbjct: 156 RLVYNLNYPSRVGMQTPFTNFTVTLDAPKKMLEGDHAVYAGERVEPLGEYEREAKDFFIA 215 Query: 324 -------------TAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQ 370 FP + DP +I + ASKR LN Sbjct: 216 LTEVLREGDALGQPFTFPIPTLMVT--AKMLWDDP--EIFEAVFATASKRGSFYWLN-TN 270 Query: 371 VVKVTGSFKTPMGCRSFLGVWE----------------------NENGE--QIHDGRNNL 406 VV S+ M CR + E G + D ++ Sbjct: 271 VVDPDASY--AMCCRIAIDKTEMAFAFGVSGKSAEEEALERLERGRFGGLWAMPDVTGSV 328 Query: 407 GVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC 466 V ++NLPR+AL+A+G++ FW+ ++ L + RK R + Y Sbjct: 329 NVTTVNLPRLALKARGNDDKFWEEYEKVLGVVRKTTDWFRERYVRLITS-----YKHMYS 383 Query: 467 GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQ 526 + L ++ F ++G +G+ E + +++ E R + E +++ Sbjct: 384 MIHLYLEEFPGSHFN------TVGILGLPEAASIYLNEPKLWE-EGTRKDWLRAAELMKE 436 Query: 527 -------AVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVT---DKGYYTNS 576 +W ETG +++ P E+ + D EF + + Y+ S Sbjct: 437 MVEFATAKAREWMRETGTPWNVEEVPGESAAAKLAIKDMREFPELKEYLSDPENPIYSTS 496 Query: 577 FHLDVEKKVNPYDKIDFEAPYPPLANGGFICYG---EYPNIQHNLKALEDVWDYSYQHVP 633 + D+I E GG + + E P+ + K + + + Sbjct: 497 -VAPYYGALELADRIRVEEKVQKSFTGGVMMHIFLGEEPDPEALAKLTKRLMR---TELV 552 Query: 634 YYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNA 693 Y+ I C CG++ T CP+CG+ + V V R+ GY + +N Sbjct: 553 YWSYTPAITVCNACGYS----TTGLYTHCPRCGSEN---VEVWSRIIGYYRPL--KNWNP 603 Query: 694 GKQEEVKRRVKH 705 +++E R + Sbjct: 604 FRKKEFWTRRHY 615 >UniRef50_A8A8G8 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8G8_IGNH4 Length = 660 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 131/698 (18%), Positives = 231/698 (33%), Gaps = 133/698 (19%) Query: 82 IEYRHDRDIEREKRGRLNQEI--RGLVEQTNASLLNE---NANKDSKVIPTQRDLLAGIV 136 I +H R + R+ + G + E + +S LL Sbjct: 2 IRPKHSNTKRRPRMARVGDHLTTLGFTNVKKPRNVLEEMMGRSVNSNEYQGPNKLLLEAA 61 Query: 137 AKHYA---RQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNA 193 ++ + ++P+D++ AH+ G ++ H L S F P C D +L +G K Sbjct: 62 ERYLWEHVVEDVMPKDMISAHKEGVVYVHKLPQSVFLPY--CNGNDYSRVLKKGLKTPTI 119 Query: 194 EIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIP 253 P + A A A +A + + G ++ +APF+ Sbjct: 120 VAGPARHYQVAMAHAANFLAMMQQYWTGAQAFGSVELWVAPFIAK--------------- 164 Query: 254 DAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSW------------ 301 + +E Q+L YE+N QTPF S Sbjct: 165 ------EHLSDEEIRQGIQTLYYELNLPWRPGMQTPFTNITVTYTESKYMLDQPVIIGGA 218 Query: 302 -----------ESRLIQESILRNRIAGLGKNRKTAVFPKLV--FAIRDGLNHKKGDPNYD 348 E+R + + G R+ FP +D N + Sbjct: 219 STGDLLGDYLDEARRWLIQLGKVLQRGDSL-RQPFTFPIPTLMPTAKDFYNDAE------ 271 Query: 349 IKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCR---------------SFLGVWEN 393 + A+K LN + + M CR L E+ Sbjct: 272 LFDAIFVTAAKMGSYYWLNTKVIDPDSA---FAMCCRYVVKKDEVNKAFMGGLRLKKLED 328 Query: 394 ENGEQ--------------IHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLAR 439 + E+ I D ++GV+++NLPRIAL+A+GD TF+++L+ER+ L Sbjct: 329 QRKEELEKLAKGRLGGMWAIPDITGSIGVVTVNLPRIALDARGDVETFFEILEERVELVA 388 Query: 440 KALMTRIA---RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHE 496 K L RL +++ R + + ++G IG+ E Sbjct: 389 KWLSWWRNHYLRLMKTYRNFYSMVWEYSPEWTRTHFN--------------TIGAIGMPE 434 Query: 497 TINALFGGEHVYDNEQ--LRAKGI----AIVERLRQAVDQWKEETGYGFSLYSTPSENLC 550 L G V+ +E + K I +++ + + E G F++ P E Sbjct: 435 AAAILLGDPEVWTSEDVGAKEKAIELEDKMIKTMADIASRLTIEMGEPFNVEEVPGETAA 494 Query: 551 DRFCRLDTAEFGVVPGVTDKG--YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY 608 + D + V +G Y+ S + + + +I +E GG + + Sbjct: 495 AKLFLNDLKHYPEVREYVPEGVDMYSTSVVPYYDHGITLWQRIKWEGKVQQRFTGGVMMH 554 Query: 609 GEYPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGN 667 Q + +AL + V Y+ I C G T CP+CG Sbjct: 555 IFLGE-QPDPEALAKLTQKIMDAGVVYWSYTPAISVCEN-GHKTVGLYT----RCPRCG- 607 Query: 668 HDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 ++ + R+ GY +N +Q+E + R + Sbjct: 608 ---AKTEIWSRIIGYYRPVS--NWNPFRQKEFRMRTHY 640 >UniRef50_Q12U78 Anaerobic ribonucleoside-triphosphate reductase n=14 Tax=Archaea RepID=Q12U78_METBU Length = 795 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 134/768 (17%), Positives = 245/768 (31%), Gaps = 98/768 (12%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRA------AKAAEVDDADYCATVAAVVSEQMQGRNQV 56 P V DG V + + +L+ D VA ++++G + Sbjct: 55 PKVRTTDGHMVQWDRNIVVNQLLKETTLSEWYHNISSISKDEAHDVAKETEKRIRG---M 111 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGL--VEQTNASLL 114 +I + + +L++ I R R+ + ++Q + Sbjct: 112 NIKFLSGPLIRELVNM---------ILLERGHLEWRNVSTRVGSPVFDACEIDQGSGFEA 162 Query: 115 NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFN 174 NENAN + I + Y LLP + H GD+H HDL+Y F Sbjct: 163 NENANLQENAETAHKKKADKISKEQYLL--LLPPKIADLHLNGDLHIHDLEY--FGTRAF 218 Query: 175 CMLIDLKGMLTQGFKMGNA-----EIEPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 C DL+ G + P A + + ++ GG Sbjct: 219 CQDWDLRYFFYYGLMPDGSGAKASVAGPAMKAEVAMLHAVKALGSAQTNFAGGQGFYNFL 278 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTP 289 APF K + + + + +R + + + Q + Sbjct: 279 TFCAPFFEGKPYKEIEQLMQMFVYEMTQMMVARGGQLVFSSVQ---LSPGVPKMWRDKPV 335 Query: 290 F-----------VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIR--- 335 E RL ++++ + G K FPK +I Sbjct: 336 VYRGRVWDGTNGTEKRVYGDYEREVRLGFKAMMNVMLEGD-YWGKPFNFPKPEISIEPDF 394 Query: 336 ----DGLNH-KKGDPNYD-IKQLALECASKRMYPDILNYDQVVKVTGSFKTP-MGCRSFL 388 + N P YD + + E +K P N + G + C Sbjct: 395 MEEDEMFNRANPELPTYDELYTMTFELTAKYGTPYFDNQLPEYRGAGEGISCYQCCAYQF 454 Query: 389 GVWENENG---------EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLAR 439 + + E H + VISLN PR A A+ D+ + L + A Sbjct: 455 SANADSDSEFDEKMYFNEGKHFSMGSWQVISLNCPRAAYLAENDDEKLFSHLKHLMDEAM 514 Query: 440 KALMTRIARLEGVKAR-VAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETI 498 + T++ L+ + P + + ++G IGI+E + Sbjct: 515 EVFQTKVKWLKPIIENGRMPFATQQ---PKDPVTGKKGAIAVDIDSLVFTIGVIGINEMV 571 Query: 499 NALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDT 558 G + +++ I + + + + G +L TP+E RF D Sbjct: 572 QYHTGSQM-HESRDAFKLAIRAMTEMDIYGKELSRKFGMEIALARTPAETTGQRFSVSDL 630 Query: 559 --AEF-------------GVVPGVTDKG----YYTNSFHLDVEKKVNPYDKIDFEAPYPP 599 EF V G+ + YYTN H+ V+ D+I+ E + P Sbjct: 631 LHEEFRDKVISVVKGDVKAAVEGIKNTHDLPIYYTNGTHVPPGADVSLVDRINIEHVFFP 690 Query: 600 LANGGFICYGEYPNIQHNLKALEDVWDYSYQH--VPYYGTNTPIDECYECGFTGEFECTS 657 + +GG I + + K L+D ++ + Y+ + C + Sbjct: 691 IVDGGDIMHIWMGEGSPDAKGLKDFAMNLARNTQLGYFAFTKDMSVCMD----DFHMMAG 746 Query: 658 KGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 C CG+ + ++ RV GY+ + +NA K++E++ R ++ Sbjct: 747 LKDACENCGSDNIEQL---SRVTGYIQAVG--GWNAAKKQELEDRKRY 789 >UniRef50_Q2LUI4 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUI4_SYNAS Length = 731 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 143/723 (19%), Positives = 251/723 (34%), Gaps = 73/723 (10%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDI 58 +T V D + +RI +A++R D+D V+ V +Q+ G + Sbjct: 52 LTLFVRTSDEEVARWNRQRIVDALIRETD----IDSDTAEAVSREVEKQIMASGIGLLTT 107 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 + I+ V+ +L+ D G ++ L+ N NA Sbjct: 108 SLIRELVDAKLIERGL-----------EDARGMHALLGFPLYDVGQLILHPN----RGNA 152 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 N T L GI + YA + DV AH GD+H H L Y P C Sbjct: 153 NLPHNPEATNLILAEGI-KRAYALHSVFSHDVGDAHTAGDLHIHALGYID-RPYSICS-- 208 Query: 179 DLKGMLTQGFKMGNAE--IEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 L+ + G + N+ P + A + A + H G + ++ AP++ Sbjct: 209 SLEYIKKFGMDLPNSVNVAGPARHGDVLLAHMVRYAAILQGHFSGVVAWHAVNLFFAPYL 268 Query: 237 TASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFG 296 + + + I + A++ + F + G Sbjct: 269 VGMPDAEVRQLAQMLIYEFSQLASATGGQSI---FTDIHLYWEVPEYLADVPAIGPGGEE 325 Query: 297 LGTSW-----ESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQ 351 G + ESR ++ G K +FP+ + I + + Sbjct: 326 TGKCYGDYLPESRRFVWALFDVYREGDALG-KPFIFPRPIVHITEAFFRTPD--CGEFLD 382 Query: 352 LALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIH----DGRNNLG 407 E A + P + G C S + E + ++ Sbjct: 383 HLCEVAVDKGNPIFVF------DRGDLLRLSECGSLYPGNSPSHKEDMQKPWMMRHASMQ 436 Query: 408 VISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACG 467 IS+NLPR+ A+GD + LL +L LA KA + + +E + Y Sbjct: 437 NISINLPRLGYRAEGDSRRLFDLLTAQLELAVKAHSQKKSFMEKLLD------YGRQGPL 490 Query: 468 VRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQA 527 L + D + R + +G +G++E + G +H++++ G+ IV +++ Sbjct: 491 SLLTMNRDGHPYLRPDRMTYLVGMVGLNELVRISTG-KHLHESSTALKLGLKIVAHMKKQ 549 Query: 528 VDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG-------YYTNSFHLD 580 +D+ +TG L +P+E RF RLD F G +G YYTNS +LD Sbjct: 550 IDKLSRKTGMRLILEQSPAETTAYRFARLDLRYFSPGAGRFIRGDVVRGGLYYTNSTNLD 609 Query: 581 VEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNT- 639 + K+ P++++ E + L G + + + +AL Y G Sbjct: 610 ISVKMMPFERVRQEGLFHSLIEGAALTNLRLEEKRPSKEALSSFIRQVYFETESAGVTFS 669 Query: 640 -PIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEE 698 C++C +CP CG ++ R+ Y +N GK E Sbjct: 670 SDFTTCFDC----RKTVRGLHESCPVCGEKAIDGLA---RITRYYSP--ISGWNKGKLAE 720 Query: 699 VKR 701 +K Sbjct: 721 LKD 723 >UniRef50_D1SNH7 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SNH7_9EURY Length = 937 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 112/468 (23%), Positives = 198/468 (42%), Gaps = 40/468 (8%) Query: 249 EWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF---VTFGFGLGTSWESRL 305 + ++ D E + + I F S+ E+ + T G E++L Sbjct: 491 DLSVEDNENFITATGILCHNTIFSSINLELEIPEFLKDKPAVMAGTTRGTYGDYEEEAKL 550 Query: 306 IQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDI 365 I E+++ + G K +FP + +R+ D N ++ + ++K P Sbjct: 551 ILEALVDVMMEGDAMG-KPFLFPNFIIKLRENAFR---DENKELMYKIHQLSAKFGIPYF 606 Query: 366 LNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEA 425 +N +VT + MGCR+ L + E N+ SLNLPRIA EA GD+ Sbjct: 607 INMLPDWQVTNT--NAMGCRTRLSGNWTGDAEIDTLRTGNMQWYSLNLPRIAYEANGDDD 664 Query: 426 TFWKLLDERLVLARKALMTRIARLEG--VKARVAPILYMEGACGVRLNADDDVSEIFKNG 483 +++L ERL L ++AL+ + + + P L E D ++ Sbjct: 665 KLFEILHERLELVKEALLIKHEVTKERLYVDNLMPFLTQE----------FDGESYYRYE 714 Query: 484 RASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYS 543 + + G++G++E + G E +++++ G I+ +R+ D+ KEETG +++ Sbjct: 715 HTTKTFGFVGLNEMLKYHLG-EELHESKDAVKFGEKIIGYIREYADKLKEETGLRWTVTQ 773 Query: 544 TPSENLCDRFCRLDTAEF-----GVVPGVT---DKGYYTNSFHLDVEKKVNPYDKIDFEA 595 TP+E+ R RLD + VV G D YYTNS H+ V+ + +K+ E Sbjct: 774 TPAESCAGRMARLDYKYYKEETISVVRGDLNDVDSLYYTNSSHVRVDAPITLGEKVRIEE 833 Query: 596 PYPPLANGGFICYGEYPNIQHNLKALEDVWDYS-YQHVPYYGTNTPIDECYECGFTGEFE 654 + PL NGG I + + L D+ + ++ + C +CG Sbjct: 834 KFHPLCNGGHIMHVWNIESAADPDVLMDITKKITKTDIGFWTYTKNLSVCNKCG----LS 889 Query: 655 CTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 C CG+ D ++ R+ GYL + +N KQ+E++ R Sbjct: 890 MGGLRDRCINCGSEDIAKF---SRITGYLQ--NISNWNKAKQKELEDR 932 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 114/279 (40%), Gaps = 48/279 (17%) Query: 13 VPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSG 72 PF E+I +A++R A D + +A V +++ ++ + + + ++++ Sbjct: 100 EPFDKEKIVKALIRETGA----DKETAQKIADEVERELK---KLKVKYLTAPMIREIVN- 151 Query: 73 PYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLL 132 YK + + E RH K RL + + + + ENAN + + Sbjct: 152 -YKLIEYGFEELRH-------KHTRLGMPVYDITKLIKSGS-RENANLMYNPESIHK-WV 201 Query: 133 AGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMG- 191 A K YA + P+ + AH +GDIH HDL+Y+ P+ C+ DL+ G K+ Sbjct: 202 ADETMKQYALLAIFPKHIADAHLKGDIHLHDLEYAATRPV--CLQHDLRPFFMYGLKVDG 259 Query: 192 ----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTA 247 + +P K A A+++ +++ GG +I+ + LAP+V Sbjct: 260 TGLHTSVSKPAKHPEVAIQHAAKVMMAAQTNMSGGQSIDEFNVWLAPYVRG--------- 310 Query: 248 EEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANG 286 + ++ Q YE+N ++ A G Sbjct: 311 --------------LSYEKIKQLMQMFIYELNQMYVARG 335 >UniRef50_B5YJD4 Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=Bacteria RepID=B5YJD4_THEYD Length = 1385 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 114/539 (21%), Positives = 204/539 (37%), Gaps = 55/539 (10%) Query: 192 NAEIEPPKSISTATAVTAQIIAQVASHIYGGTT-----INRIDEVLAPFVTASYNKHRKT 246 E K TA AV A V GG + I + E A + + Sbjct: 875 TVTEEEAKDFITAIAVLAGYNFNVRKRKMGGISKKLQYIITLTETKADHIMKIEKIEYRG 934 Query: 247 AEEWNIPDAEGYANSRTIKE---CYDAFQSLEYEVNTLH-------TANGQTPFVTFGFG 296 + E R + F ++ ++ G+T T+G Sbjct: 935 IIWSVNTENETVIARRNGQVFITGNTPFSNITLDLKVPEHFVSQAVIIGGKTQDATYG-- 992 Query: 297 LGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALEC 356 E + +++ G K + FP I + N + L ++ Sbjct: 993 -EFQREMDMFNQALFEVLSEGDAKG-RVFTFPIPTINITKDFDW-----NSPVVDLIMQA 1045 Query: 357 ASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDG----RNNLGVISLN 412 +K P NY ++ M CR L ++ G ++GV++++ Sbjct: 1046 TAKYGIPYFANYVNSDLKPEDARS-MCCRLRLETKALKHRGGGLFGSNPLTGSIGVVTID 1104 Query: 413 LPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNA 472 LPRI + E F++ L + +A+ +L + LE LY + + Sbjct: 1105 LPRIGYLSN-SEEEFYQRLLRLMEIAKTSLEIKRKVLERFTD---SGLYPYSKHYLS-SI 1159 Query: 473 DDDVSEIFKNGRASISLGYIGIHETI-NALFGGEHVYDNEQLRAKGIAIVERLRQAVDQW 531 + + N ++ +G IG++E I NA + E+ +A + +++ +R+ + ++ Sbjct: 1160 KERAGAYWCNHFST--IGIIGMNEAIANARWLNSKGIWTEEGKAFALKVMDFMREKLLEY 1217 Query: 532 KEETGYGFSLYSTPSENLCDRFCRLDTAEFG-VVPGVTDKGYYTNSFHLDVEKKVNPYDK 590 ++ETG ++L +TP+E R R+D ++ ++ ++ YYTNS L V + + Sbjct: 1218 QKETGNLYNLEATPAEGTSYRLARIDKQKYPDIITQGSEHPYYTNSTWLPVGFTESIHYI 1277 Query: 591 IDFEAPYPPLANGG---FICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYEC 647 +D + GG I GE P Q + + V++ +PY C EC Sbjct: 1278 LDNQDELQSKYTGGTVQHIFLGEKPEPQKLKRFIRQVFE--KYTLPYISITPTFSVCSEC 1335 Query: 648 GFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 G+ + TCPKCG + RV GYL +N GK+EE K R K++ Sbjct: 1336 GY-----IEGEHSTCPKCGRE----CEIYSRVVGYLRPVS--NWNEGKKEEFKDR-KYM 1382 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 12/227 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVV---SEQMQGRNQVD 57 M +++KRDG VPF E+I AI +A KA D D + V +E++ Sbjct: 1 MFKNIIKRDGRIVPFDPEKITVAISKAGKATGEFDYDTAKRLTIKVLLLAEELIRDRDPH 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIERE-KRGRLNQEIRGLVEQTNASLLNE 116 + EIQ VE L+S PY++ A+AYI YR RE R + I + + + ++E Sbjct: 61 VEEIQDIVEEILLSSPYRKTAKAYIIYRDQHARMREIARQGGLELIDNYLSKVD-WRISE 119 Query: 117 NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 N+N + + ++ ++K Y + P +V +AH GD+H HDL+ + C+ Sbjct: 120 NSNMSFS-LQGLNNYISSEISKSYWLHKIYPPEVREAHINGDMHIHDLNTLSAY----CV 174 Query: 177 LIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYG 221 DL +L +GF G E P K + A + Y Sbjct: 175 GWDLMDLLIRGFGGVPGKVESRPAKHLRPALGQIVNFLYTTQGECYS 221 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 20/71 (28%), Gaps = 21/71 (29%) Query: 217 SHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY 276 + G + +D +LAPF+ + K+ A Q + Sbjct: 594 GNSAGAQAFSNVDTLLAPFIA---------------------YDGLNYKQVKQALQEWVF 632 Query: 277 EVNTLHTANGQ 287 +N Q Sbjct: 633 NLNVPTRVGFQ 643 >UniRef50_B1L9A6 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Thermotogaceae RepID=B1L9A6_THESQ Length = 651 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 125/651 (19%), Positives = 231/651 (35%), Gaps = 114/651 (17%) Query: 111 ASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPR-----------DVVQAHERGDI 159 S ++ NAN I T ++ Y+ + + + V+A G + Sbjct: 52 ESTIDANANVRVTNISTYFIEISKPHTYLYSLYRIWQKMKEMFGKEVADEFVEAQINGAV 111 Query: 160 HYHDLDYSPFFPMFNCMLIDLKGMLTQGFK-MGNAEIEPPKSISTATAVTAQIIAQVASH 218 + HD ++ P C L+ ++ +G + + EP K +ST Q + ++ Sbjct: 112 YLHDRHHAALMPY--CFAYTLQPIVEKGLPFIKTIKSEPAKHLSTFIQHVIQFVMFASNQ 169 Query: 219 IYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEV 278 G + F + +K EE IP + FQ L Y + Sbjct: 170 SSGAVGLPD-------FFVWMWYFVKKDLEEGIIP------RDKLDWYIEQHFQILTYSL 216 Query: 279 NTLHTANGQTPFVTFGF----GLGTSWES-RLIQESILRNRIAGL-------------GK 320 N Q+P+ F + + +E R S++ + + + + Sbjct: 217 NQPIRT-TQSPYTNFTYLDRNYIKAIFEGERYPDGSLITDHVEDIIALQKHYWEWVSKER 275 Query: 321 NRKTAVFPKLVFAI--RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSF 378 R+ FP L ++ RDG + D + + K + D + V Sbjct: 276 ERQMFTFPVLTASLLYRDGKFLDE-----DSARFINKINMKWQDTNWYISDSIDAVAS-- 328 Query: 379 KTPMGCRSFLGV-------WENENGEQIHDGRNNLG----------VISLNLPRIALEAK 421 CR +E E++ N++G VI++NLPRIALE+ Sbjct: 329 ----CCRLTSSTQTLKKFSLSSEEEEKLKGRMNSIGGSDLNIGSFKVITMNLPRIALESG 384 Query: 422 GDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFK 481 GD + ++L R+ L +KAL ++ + LY G + Sbjct: 385 GDREKYLQILRHRVQLIKKALAAVREIIKERISEGLLPLYENG--------------LML 430 Query: 482 NGRASISLGYIGIHETINALFGGEHVYD----NEQLRAKGIAIVERLRQAVDQWKEETGY 537 R ++G G+ E+ + + D E+ +++ +R+ ++ E G+ Sbjct: 431 LNRQYGTIGVTGVWESASIMGLTTEDIDGLKYTEEGEVFVDNVLDTIREEAEKGYHEYGF 490 Query: 538 GFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPY 597 F++ P+E + D FG Y+N + + + + ++I + + Sbjct: 491 TFNIEQVPAEKAAVTLAQKDRFLFGEKQPF---EIYSNQW-VPLMANTDVLNRIRYSGKW 546 Query: 598 PPLANGGFICYGEYPNI-QHNLKALEDVWDYSYQHVPYYGTNTPIDECYE-CGFTGEFEC 655 +GG I + + ++ V + V Y+ NT I C + F GE Sbjct: 547 DKKVSGGAILHINLGESFKTEEESFNMVKMIADMGVMYFAFNTKISVCEDGHAFYGE--- 603 Query: 656 TSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQE-EVKRRVKH 705 CP CG ++V R+ GYL A FN ++E E RR + Sbjct: 604 -----RCPVCGK---AKVDEYMRIVGYLVPVSA--FNKERREIEYPRRQFY 644 >UniRef50_D1JM33 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM33_9BACE Length = 733 Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats. Identities = 153/763 (20%), Positives = 257/763 (33%), Gaps = 86/763 (11%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQGRNQVDINEIQ 62 V KR G V F E+I AI +A + +V+ D +V ++S V + IQ Sbjct: 2 KVQKRTGQIVDFDLEKIGNAIKKAFDSKQVEYDPAIVKSVDKLISLTYTNV-PVSVETIQ 60 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIER---EKRGRLNQEIRGLVEQTNASLLNENAN 119 VE LM Y +A+ +I YR R R E+ +NQ + ++S + NAN Sbjct: 61 DYVERVLMQFGYYDIAKTFILYREQRKSTRFVKERIDYMNQYSQSTDNAASSSETDGNAN 120 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQH-------LLPRDVVQAHERGD---IHYHDLDYSPF 169 K + + + RQ L P Q D I+ HD +P Sbjct: 121 VTMKNVANLEGEVYKTTNRIIQRQRMKDELNILFPEVAKQYETDLDNHIIYTHDEASTPV 180 Query: 170 FPMFNCMLIDLKGMLTQGF-KMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRI 228 + CM + L +LT+G + P + + + +I ++S G + Sbjct: 181 LKQY-CMAVSLYPLLTEGVGNIDGVTPSEPNDLQSFSGQITNLIFLLSSQCKGAVAVGEY 239 Query: 229 DEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANG-Q 287 L +V + + AF+ + VN Q Sbjct: 240 FIALNYYVVKEFGDKWYEKLDCEASSPHCLIKRTVRDNILKAFKQFVWGVNQPAGNRSYQ 299 Query: 288 TPFVTFGFGLGTSWES----------------------RLIQESILRNRIAGLGKNRKTA 325 +PF + T + S R+ + + R+ ++ Sbjct: 300 SPFTNISYYDHTYFTSLFGEFCYPDGSKPEWIAIDTLQRMFMKWFNQIRL------KQVL 353 Query: 326 VFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCR 385 FP FA+ + D NY KQL E ++ + S CR Sbjct: 354 TFPVETFAMVHNGDDII-DLNY--KQLCAEMYAE-GHSFFTYISDSADSLAS-----CCR 404 Query: 386 SFLGVWEN---ENGEQIHDGRNNLGVISLNLPRI----ALEAKGDEATFW---KLLDE-- 433 + EN + VI+LN+ RI AL + KL+ Sbjct: 405 LRNELAENTFSPTSGLTGVMTGSCNVITLNINRIVQDWALTHTLNGTPLIKGKKLIGNPL 464 Query: 434 RLVLARKALMTRIAR-LEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYI 492 R+ + L + R LE V M + + ++G Sbjct: 465 RVTVIENDLKNYVTRILERVYKYHIAFKTMLYDLEDKGMFAASNGGYIHISKLYSTIGIN 524 Query: 493 GIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAV---DQWKEETGYGFSLYSTPSENL 549 G++E A F G V +N + I+ +++ + + F+ P+E L Sbjct: 525 GLNEA--ARFLGMKVSNNPEYIEFLQLILGTIKEQNKLHSIHDRKRPFLFNSEVVPAEGL 582 Query: 550 CDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEA-PYPPLANGGFICY 608 + + D VVP D+ Y NS+ + + DK +GG + Sbjct: 583 GGKNYKWDKEGGYVVP--EDENLY-NSYFYNAHDDTSILDKFILHGHQTYQYTDGGSAAH 639 Query: 609 GEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNH 668 + + L+ + Y+ N P +C +CG TCP CG+H Sbjct: 640 INLEDHLSKEQYLKLIDFAIANGTNYFTFNIPNSKCEDCG----KIIKRPIDTCPCCGSH 695 Query: 669 DASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQI 711 + ++ RV GYL A F + +Q+E + R+ G Q+ Sbjct: 696 NITQ---YTRVIGYLRPTKA--FGSDRQQEARNRIYSDGKSQV 733 >UniRef50_B8D5R3 Anaerobic ribonucleoside triphosphate reductase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5R3_DESK1 Length = 848 Score = 258 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 138/334 (41%), Gaps = 45/334 (13%) Query: 387 FLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRI 446 F G+W + D ++ V+ +N+PR+ALEA+G++ FW+L DE L L R+A+ Sbjct: 545 FGGLW------AMPDITGSVNVVDINIPRLALEARGNDTRFWELYDEALKLVREAVDWFR 598 Query: 447 ARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASI--SLGYIGIHETINALFGG 504 AR + YM ++E +S ++G IG+ E L Sbjct: 599 ARYVKILKEHPNFYYM-------------ITEYMPEFPSSHFNTIGLIGLPEAAAILLQE 645 Query: 505 EHVY----DNEQLRAKGI--AIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDT 558 ++ ++ LRA + +VE +W +E+G +++ P+E+ + LD Sbjct: 646 PKLWLDGNRSDWLRATELMRKMVEHATNTARRWMQESGTPWNVEEVPAESASPKMAALDM 705 Query: 559 AEFGVVPGVT---DKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYG---EYP 612 + + D Y+ S ++ D+I+ EA GG + + E P Sbjct: 706 KLYPELADYLPDPDNPVYSTSIAPYYAPEMELPDRIEVEARVQKYFTGGVMMHIFLAEEP 765 Query: 613 NIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASR 672 K + + D + Y+ + C CG T T +CP+CGN + Sbjct: 766 EPDALAKLAKRIMD---TDIVYWSFTPALTYCPSCGRT----YTGLYKSCPRCGNEN--- 815 Query: 673 VSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 + V R+ GY + +N +++E R ++ Sbjct: 816 IEVWSRIIGYYRP--IKNWNPQRRKEFWTRNHYV 847 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 110/346 (31%), Gaps = 57/346 (16%) Query: 84 YRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQ 143 YR + + V+ ++ +NENANK LL + + Sbjct: 11 YRRCLMQSSKVDTDMRDPFIEFVKWSSLD-VNENANKYMGPGSFFSYLLEEYMKRDIL-- 67 Query: 144 HLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSIST 203 LLP +++AH G I+ H L S + P C + +L +G K P + T Sbjct: 68 GLLPSHILKAHRDGLIYIHKLPQSIYIPY--CTGHSMARLLEKGLKTPTVISRPARHFDT 125 Query: 204 ATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRT 263 A + + + G + ++ PF+ ++ Sbjct: 126 FVDHVANYLITLQHYFTGAQAFSSVEWYAGPFIR---------------------SDGLD 164 Query: 264 IKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS----------------------- 300 + Q L Y +N QTPF F + S Sbjct: 165 YRGVKQNIQRLLYNLNYPTRIGLQTPFTNFTIIMDASRKALEGDYAVYDGKKTEPLGAYE 224 Query: 301 WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR 360 E+++ ++ N + G + FP L + DP +I + E A+KR Sbjct: 225 KEAKIFLLALFENYMNGDSVG-QPFTFPIPTLMTTSKLLWE--DP--EIYEAVFETAAKR 279 Query: 361 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNL 406 LN +VV S+ M S + N +GE L Sbjct: 280 GSFYWLN-TRVVDPDASY--AMCLHSGEKIPINNDGEVHELTMGEL 322 >UniRef50_C5VLT4 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Prevotella RepID=C5VLT4_9BACT Length = 719 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 133/740 (17%), Positives = 246/740 (33%), Gaps = 96/740 (12%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 + KRDG K F ++I AIL+A ++ ++ T++ +++ + +N + + +IQ Sbjct: 7 TITKRDGSKDRFSLDKIMNAILKAFESV--NEPTDLGTLSKIIAN-LNIQNDIKVEDIQN 63 Query: 64 AVENQLMSGPYKQLARAYIEYRHDRDIERE--KRGRLNQEIRGLVEQTNASLLNENANKD 121 VE LM Y Q+A+++I YR +RE ++ + + S + NAN + Sbjct: 64 QVELALMKEGYYQVAKSFIVYRQQHTEDRETLEKMKFLSDYCVASNAATGSKFDANANVE 123 Query: 122 SKVIPT-------------QRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSP 168 K I T R LL + K Y + L + + I+ +D Sbjct: 124 HKNIATLIGELPKQGFIRLNRRLLVDRIKKMYGKD--LADEYIDLLNHHFIYKNDETNLA 181 Query: 169 FFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRI 228 C I + L G P ++ + ++ V+S + G Sbjct: 182 ----NYCASITMYPWLIGGTNSIGGNSTAPTNLKSFCGGFINMVFMVSSMLAGACATPEF 237 Query: 229 DEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA-NGQ 287 + F+ Y K + + K D F+ + Y +N A N Q Sbjct: 238 LMYMNYFIQKEYGKDYWERADEIVDL--SLRKRTIDKVITDYFEQIVYSLNQPTGARNYQ 295 Query: 288 TPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNY 347 F + R ES+ N G L N ++ Sbjct: 296 AVFWNISYY------DRPYFESLFGNFYFPDGSQPDWESLSWLQKRFMTWFNQERLKTVL 349 Query: 348 DIKQLALECASKRM------YPDILNYDQVVKVTGSFKTPM---------GCRSFLGVWE 392 + ++ + D ++ SF T M CR + + Sbjct: 350 TFPVETMALLAENGDCKDKEWGDFA--AKMYSEGHSFFTYMSDNADSLSSCCRLRNEIQD 407 Query: 393 NENGEQIHDG---RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARL 449 N + G + V+++NL R A + + + L + L K + L Sbjct: 408 NGFSYTLGAGGVSTGSKSVLTINLNRCIQFAVNNNLDYKEYLTHIIELCHKVQLAYNENL 467 Query: 450 EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYD 509 + + L+ G R +++G G+ E + G + Sbjct: 468 KELLRNHMLPLFDAG--------------YINIDRQYLTIGINGLVEAAEFM--GLDITP 511 Query: 510 NEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTD 569 NE+ + ++ + ++ + F+ P+EN+ + + D ++ Sbjct: 512 NEEYKKFVQTVLGLIETQNKAFRTKEAM-FNCEMIPAENVGVKHAKWD----------SE 560 Query: 570 KGYYT-----NSFHLDVEKKV-NPYDKIDFE-APYPPLANGGFICYGEYPNIQHNLKALE 622 GY+ NS+ VE DK APY GG + + + Sbjct: 561 DGYFVPRSCYNSYFYRVEDNSLTILDKFKLHGAPYIEHLTGGSALHMNLEEHLSEPQYRQ 620 Query: 623 DVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY 682 + + + Y+ N P C +CG + CP C + + V R+ GY Sbjct: 621 LLRVAAQEGCNYFTFNIPNTVCNDCGHIDKRYM----HECPHCHSKN---VDYLTRIIGY 673 Query: 683 LGSPDARPFNAGKQEEVKRR 702 + F+ +QEE RR Sbjct: 674 MKRVS--NFSVPRQEEAHRR 691 >UniRef50_C9LGY8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Prevotella RepID=C9LGY8_9BACT Length = 727 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 135/728 (18%), Positives = 246/728 (33%), Gaps = 74/728 (10%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 + KRDG F ++IK AIL+A + A V E ++ N + + +IQ Sbjct: 33 ITKRDGTTERFSLDKIKSAILKAFTSLHQP---IDAQGLQRVIEHLRFCNGMSVEDIQNQ 89 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIERE--KRGRLNQEIRGLVEQTNASLLNENANKDS 122 VE LM+ + ++A+A++ YR +R+ +R + S + NAN ++ Sbjct: 90 VEVALMAEKHFKVAKAFMLYRQQHTEDRDVAERLSFMFDYCDAANPATGSKYDANANVEN 149 Query: 123 KVIPTQRDLLAGIVA---KHYARQHLLPRDVVQAHERGDIHYHDLDY----SPFFPMFNC 175 K I T L + + +A ++ D + C Sbjct: 150 KNIATLIGELPKRSFIRLNRRLLTDRIKQMYGKALAERYLYLLDNHFIYKNDETSLANYC 209 Query: 176 MLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 I + L G P ++ + ++ V+S + G ++ F Sbjct: 210 ASITMYPWLLNGTMNIGGNSTAPTNLKSFCGGFVNMVFIVSSMLSGACATPEFLMYMSYF 269 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA-NGQTPFVTFG 294 + Y + + ++ K D F+ + Y +N A N Q F Sbjct: 270 LQQEYGDDFYLRADEVVDLSKK--QRTMDKIITDCFEQVVYSINQPTGARNFQAVFWNIS 327 Query: 295 FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLAL 354 + + ESI + GK L N ++ + Sbjct: 328 YY------DKNYFESIFGDFRFPDGKKPSWDALSWLQKRFMRWFNAERTRTVLTFPVETM 381 Query: 355 ECASKRM------YPDILNYDQVVKVTGSFKTPM---------GCRSFLGVWENENGEQI 399 SK Y D ++ SF T M CR + +N + Sbjct: 382 ALLSKDGDVLDKEYADF--TAEMYAAGHSFFTYMSDNADSLASCCRLRNEIQDNGFSYTL 439 Query: 400 HDG---RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARV 456 G + V+++NL R +A + + + L + L K + L+ ++A+ Sbjct: 440 GAGGVSTGSKSVLTINLNRCVQQATREGLNYTEYLASIVDLVHKVQLAYNENLKALQAKG 499 Query: 457 APILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAK 516 L+ G R +++G G+ E +L G + DN++ Sbjct: 500 MLPLFDAG--------------YINIQRQYLTIGVNGMVEAAESL--GIQISDNKEYEEF 543 Query: 517 GIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNS 576 +I+ + + Q++ + F+ P+EN+ + R D VP + Y NS Sbjct: 544 VGSILGLIEKYNKQYRSKD-VLFNCEMIPAENVGVKHARWDREAGYFVP----RDCY-NS 597 Query: 577 FHLDV-EKKVNPYDKIDFEA-PYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPY 634 + V + + +K Y GG + + + + + + Y Sbjct: 598 YFYIVEDPNTDIIEKFRLHGRRYIEHLTGGSALHMNLDEHLGEAQYRQLLRVAAKEGCNY 657 Query: 635 YGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAG 694 + N P C ECG + CP C +H+ V RV GYL F+ Sbjct: 658 FTFNIPNTLCNECGTIDKRHLQE----CPHCHSHN---VDYLTRVIGYLKRVS--NFSVD 708 Query: 695 KQEEVKRR 702 +Q+E RR Sbjct: 709 RQKEAARR 716 >UniRef50_B3TA58 Putative ATP cone domain protein n=6 Tax=environmental samples RepID=B3TA58_9ARCH Length = 745 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 114/667 (17%), Positives = 233/667 (34%), Gaps = 114/667 (17%) Query: 11 CKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLM 70 F +++I ++++R + + V ++ + + ++ +L+ Sbjct: 175 SIEEFNTQKIIQSLVRE----GSLPLELAQKITEEVENRIY---KYQTAYLTGSLIRELV 227 Query: 71 SGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRD 130 + L Y EYRH + G E++ ++ N D + Sbjct: 228 NSVL--LEHGYEEYRHK----LARVGLPVFEVQEMISNAE--------NVDDGIE-GLLF 272 Query: 131 LLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKM 190 IV + LP+D+ AH GD+H + P + + I++K ++ G + Sbjct: 273 KAGQIVFAEHLLTSTLPKDMADAHLSGDLHITNPGLWSILP--DTIFINVKTLIEDGIDL 330 Query: 191 -----GNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRK 245 G I K+++ ++ + IIA ++ ++ L P +T ++ K Sbjct: 331 KGKHLGVCRIPSVKTLNNLSSALSMIIALISKEASQEVVLDD----LIPLLT----RYSK 382 Query: 246 TAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRL 305 E ++ D+F + + N + V+F LGT + Sbjct: 383 DLHEL-------------ERKLVDSFTTSS----VIVGYNKMSTVVSFRIPLGTEQK--- 422 Query: 306 IQESILRNRIAGLGKNRKTAVFPKLVFAIRDG--LNHKKGDPNYDIKQLALECASKRMYP 363 I +++L + KL ++ G ++++KG R+ Sbjct: 423 IVKTVLSAY----------KTYAKLTPILKIGLVIDYEKG----------------RITD 456 Query: 364 DILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGD 423 +++ + G S G+ +N +L S+NLPR+A E+ D Sbjct: 457 VSEILSEIITLGGKVMFAKHKTSQKGIICPKNSTSTVLHLGSL---SINLPRLAFESNKD 513 Query: 424 EATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNG 483 E F L + A ++ R + + +RL + ++ +N Sbjct: 514 ETYFRARLALLMRPALDSMALRKKSVSNL---------------IRLGFNPILAANTQNM 558 Query: 484 RASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYS 543 + S+ I + NA++G D+++ + ++E + ++ G + Sbjct: 559 QRSVVSLVINLVGLPNAVYGILGFKDDKKGQGILHKVIETAVDIASKKDKDLGINIIVCM 618 Query: 544 TPSENLCDRFCRLDTAEFG--VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLA 601 T S+ +RF LD ++G V +TD Y+ LD++K + K Y + Sbjct: 619 TESDG-SERFIALDGGKYGKNSVLQITDTETYSQGLVLDIDKLSSLTGKSAVITEYNKIG 677 Query: 602 ---NGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSK 658 NG F+ P ++ V + + + C CGF E Sbjct: 678 KILNGSFLIQITIPKGTKAGD-IKKVIEKGASITSSFKPVMQVLICGNCGFKDE----KL 732 Query: 659 GFTCPKC 665 CP C Sbjct: 733 EDKCPAC 739 >UniRef50_A6L4X5 Oxygen-sensitive ribonucleoside-triphosphate reductase n=10 Tax=Bacteroidales RepID=A6L4X5_BACV8 Length = 697 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 141/737 (19%), Positives = 252/737 (34%), Gaps = 92/737 (12%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAE-VDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 ++KRDG K F ++IK AI +A + D TV + VS + +++ EIQ Sbjct: 8 IIKRDGKKETFSLDKIKNAIAKAFLSVGSFATQDVITTVLSRVSVS----DGMNVEEIQN 63 Query: 64 AVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQ--EIRGLVEQTNASLLNENANKD 121 VE LM+ Y +A+AY+ YR +RE R +L + S + NAN + Sbjct: 64 QVEVALMAEHYYSVAKAYMLYRQKHLEDREVRDKLKFLLDYCDASNPATGSKYDANANVE 123 Query: 122 SKVIPT-------------QRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSP 168 +K I T R LL + Y ++ L ++ I+ +D Sbjct: 124 NKNIATLIGELPKSNFIRLNRRLLTDRLKDMYGKE--LSDRYLELLNHHFIYKNDETNLA 181 Query: 169 FFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRI 228 C I + L G P ++ + ++ V+S + G Sbjct: 182 ----NYCASITMYPWLNNGTIAVGGNSTAPTNLKSFCGGFVNMVFIVSSMLSGACATPEF 237 Query: 229 DEVLAPFVTASY-NKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA-NG 286 + F+ Y ++ K ++ + K D F+ + Y +N A N Sbjct: 238 LMYMNYFIGLEYGQEYYKYPDKIVDLSTKQRTID---KIITDCFEQIVYSINQPTGARNF 294 Query: 287 QTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPN 346 Q F + + ES+ N G L N ++ Sbjct: 295 QAVFWNVAYY------DKYYFESLFGNFFFPDGSQPDWNSLSWLQKRFMKWFNKERTRTV 348 Query: 347 YDIKQLALECASKRM------YPDILNYDQVVKVTGSFKTPM---------GCRSFLGVW 391 + +K Y D ++ SF T M CR + Sbjct: 349 LTFPVETMALLTKDGDVLDKEYGDF--TAEMYSEGHSFFTYMSDNADSLSSCCRLRNEIQ 406 Query: 392 ENENGEQIHDG---RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIAR 448 +N + G + V+++NL R A + L+E + L K + Sbjct: 407 DNGFSYTLGAGGVSTGSKSVLTINLNRCIQHAVKSGILYPFFLEEVVDLVHKVQLAYNEN 466 Query: 449 LEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY 508 L+ ++++ L+ G R +++G G+ E + G + Sbjct: 467 LKLLQSKGMLPLFDAG--------------YINMNRQYLTIGVNGLVEAAQFM--GIEIN 510 Query: 509 DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGV- 567 DN + A I+ + + +++ + F+ P+EN+ + + D G Sbjct: 511 DNPKYEAFVQEILGMIERYNRKYRTKD-VLFNCEMIPAENVGVKHAKWDKE-----AGFQ 564 Query: 568 TDKGYYTNSFHLDV-EKKVNPYDKIDFEAP-YPPLANGGFICYGEYPNIQHNLKALEDVW 625 T + Y NS+ V +K +N DK Y GG + + + + Sbjct: 565 TFRECY-NSYFYIVEDKSLNVVDKFRLHGRRYIKHLTGGSALHMNLEEHLSKEQYRQLLR 623 Query: 626 DYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGS 685 + + Y+ N P C EC + CP+C + + V RV GY+ Sbjct: 624 VAAIEGCNYFTFNIPNTICNECKHIDKRYL----HECPECHSRN---VDYLTRVIGYMKR 676 Query: 686 PDARPFNAGKQEEVKRR 702 F+ +Q+E +R Sbjct: 677 --ISNFSQARQKEAAQR 691 >UniRef50_A5D0B0 Oxygen-sensitive ribonucleoside-triphosphate reductase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0B0_PELTS Length = 631 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 99/613 (16%), Positives = 209/613 (34%), Gaps = 54/613 (8%) Query: 95 RGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKH-YARQHLLPR----- 148 G+++ + ++ +N NAN++ Q ++ G++ Y + Sbjct: 40 VGQMSHDYFTKRLADSSVDMNANANEELSANNYQAEVTKGLLKLEGYYLLWRYSKKRFDT 99 Query: 149 ----DVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTA 204 +++ A RG++++HD + C ++ +G G PP+ + Sbjct: 100 RRANELISAIWRGELYFHDASGHGVQ-VPYCFAYSTANLMVEGRPYGQLHSTPPRRSDSF 158 Query: 205 TAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTI 264 A + ++ G L ++ + + + I + Sbjct: 159 VAQVIETTMDLSQEFVGAVAPGDFIVNLCWYLKREGIEPGREDGQKYIENQWQKFVHVMN 218 Query: 265 KECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESR---LIQESILRNRIAGLGKN 321 + + QS ++ N Q F + + GT + +Q+ + G K Sbjct: 219 NKFRVSGQSPFSNISIFDRVNLQKLFEGYRYPDGTPVDIEYVMEVQKIVAEYFAQGDPKT 278 Query: 322 RKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTP 381 FP L + N + DP D K +I K Sbjct: 279 GLPYRFPVLTANLSVDENRRPLDP--DFVDFVARTNIKLGVYNI-------YANEGSKIA 329 Query: 382 MGCRSFLGVWE-NENGEQIHDGRNNLG---VISLNLPRIALEAKGDEATFWKLLDERLVL 437 M CR + + +G N+G V+++N PRIALE + F+++LD+R+ Sbjct: 330 MCCRFINDTGRMDYRADSFGNGGLNIGSHRVVTINFPRIALETE-SRKHFFEILDKRVKA 388 Query: 438 ARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHET 497 AR L+ + + + + + L+ ++G G++E Sbjct: 389 ARDLLLVHREEILRRRVERGFLKFFKPLRWFTLDMLFS------------TIGIHGLYEM 436 Query: 498 INALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLD 557 F G + + E +A +++ ++ ETG+ F+ P+E+ D Sbjct: 437 C--HFAGLRMEE-EGGQAFSEEVLKVTDGYALEFSRETGHSFNTEEIPAESTAVTLAGKD 493 Query: 558 TAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHN 617 +G + Y+N + + + ++ D++ + +GG I + + + Sbjct: 494 RVLYGDILQPFSL--YSNQY-IPLIADMDAVDRVKLTGRFMKHVSGGGILHLNIQDRIQS 550 Query: 618 LKALEDVWDYS-YQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVT 676 ++ + + + V ++ N C + G G TCP CG + Sbjct: 551 PDTMKRLMLLALKEGVEHFAINYGFGICTQ----GHTSVVGTGKTCPVCGEPIEDHL--- 603 Query: 677 RRVCGYLGSPDAR 689 RV GY + Sbjct: 604 TRVIGYFTKVSVK 616 >UniRef50_C8VXW8 Oxygen-sensitive ribonucleoside-triphosphate reductase-like protein n=2 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VXW8_DESAS Length = 788 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 101/609 (16%), Positives = 204/609 (33%), Gaps = 58/609 (9%) Query: 114 LNENANKDSKVIPTQRDLLAGIVAKH-YARQHLLPR---------DVVQAHERGDIHYHD 163 +N NAN++ Q ++ GI+ Y + ++++A G++++HD Sbjct: 212 VNANANEELSANNYQAEVTKGILKLEGYYLLWRYSKKRFGTRRANELIKAIWNGELYFHD 271 Query: 164 LDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGT 223 + C ++T+G G PP + A + ++ G Sbjct: 272 ASGYGVQ-LPYCFAYSTANLMTEGRMYGQLYSLPPNRSDSFVAQVIETTMDLSQEFVGAV 330 Query: 224 TINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHT 283 L ++ + I + + + QS V+ Sbjct: 331 APGDFIVNLCWYLEREGIDTESSEGRKYIENLWQKFIHVMNNKFRVSGQSPFTNVSIFDR 390 Query: 284 ANGQTPFVTFGFGLGTSWESRLI---QESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNH 340 N + F + + G+ I Q+ I G FP + + N Sbjct: 391 ENLKKLFTDYRYPDGSEVNIDYIMDVQKIIAEFFSKGDPSTGLPYRFPVMTVNLSVDENR 450 Query: 341 KKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE--NENGEQ 398 D D + ++ +I + K M CR + N + Sbjct: 451 NPLD--LDFLDFVAKTNTQLGIYNI-------YINEGSKIAMCCRFSPSTNQRMNYRVDT 501 Query: 399 IHDGRNNLG---VISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKAR 455 +G N+G V+++N PRIA+EAK F+ +LD R +A+ L+ + + Sbjct: 502 FGNGGLNIGSHRVVTINFPRIAMEAK-SREDFFNILDSRTKMAKDLLLVHREEILRRRVE 560 Query: 456 VAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRA 515 + + L+ ++G G++E + L +N + Sbjct: 561 RGFLKFFNPLKWFNLDMLFS------------TIGIHGLYEMCHFL---GFDMENLAGQD 605 Query: 516 KGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTN 575 A+++++ + +ETG+ F+ P+E+ + D +G Y+N Sbjct: 606 FTEAVLKKIEDYALAFSKETGHSFNTEEIPAESTAVTLAKKDRIIYGEDKQPFAL--YSN 663 Query: 576 SFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYS-YQHVPY 634 + + + ++ D+I + +GG I + + N ++ + + V + Sbjct: 664 QY-IPLIADMDTIDRIKLTGRFMKYVSGGGILHLNVQDRVTNPDTMKKLILMCLKEGVEH 722 Query: 635 YGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAG 694 + N C E G G CP CG + RV GY + + Sbjct: 723 FAVNYGFGICSE----GHTSIVGNGKVCPICGKPIDDYL---TRVIGYFSKTSS--WGDV 773 Query: 695 KQE-EVKRR 702 ++ E +RR Sbjct: 774 RKNYEFERR 782 >UniRef50_B2V5I1 Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=cellular organisms RepID=B2V5I1_SULSY Length = 665 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 112/691 (16%), Positives = 212/691 (30%), Gaps = 128/691 (18%) Query: 99 NQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGD 158 + I+ ++ + +L NAN + +LAG K Y + +L + + H+ G Sbjct: 4 KEIIKEYLKLSEIALH--NANFIYSLPALAN-ILAGEAFKSYMLEEILTEEEARMHKEGW 60 Query: 159 IHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKM---GNAEIEPPKSISTATAVTAQIIAQV 215 + H L C+ K + G + P K + T + I + Sbjct: 61 WYQHQLALLS----PYCLGYSAKDISIYGISSTSNVTPKSRPAKRLKTFLDQCSNFICLM 116 Query: 216 ASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLE 275 A + G +N I + +V Y ++ K + ++ Y AFQS Sbjct: 117 AQELSGAVALNDIITIATSYV--WYEENLKD-------------RKYSDEDLYHAFQSFL 161 Query: 276 YEVNTLHTANGQT-PFVTFGFGLGTSWESRLIQES-----------------------IL 311 Y VN + VT FG L Sbjct: 162 YNVNLPFRSGNSPFTNVTLEFGRPAYHLKDEFITIDGEVLDKTYSEIPSDYYNKTVLGFL 221 Query: 312 RNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNY-DQ 370 R G + + FP + I D + + I + L+ K N+ + Sbjct: 222 RAMWEGDAEG-RPWTFPLITVQITDDFDFEN-----PIFKQFLDNLDKHGGAYFENFMSK 275 Query: 371 VVKVTG------SFKTPMGCRSF------LGVWENENGEQIHDGRNNLGVISLNLPRIAL 418 G + + CR L V + G ++GVIS+N R+ Sbjct: 276 PFIEAGLEPRDPALQRSFCCRFQIDIKDILKVSNLRSIFGSVSGVGSIGVISINFNRLGY 335 Query: 419 EAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSE 478 +G++ ++ L + L AR L + +E K Y N Sbjct: 336 IHRGNKEKLFEHLKDILSKARNVLNKKRKFIEEYKKLYPTFFYYIKDLSTMFNTISIQG- 394 Query: 479 IFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYG 538 I+ G++ E+ + + + + + + + + +D++ +E G Sbjct: 395 ---GHEGLINFGFVKYDESGK-MIEEDSGIFHPEGINFAKEVADFILKTLDEFMKEDGIP 450 Query: 539 FSLYSTPSENLCDRFCRLDTAEFGVVPGVTD------KGY-------------------- 572 ++ P E + D + + + K Y Sbjct: 451 WNFEYAPGETAAPVLGQKDLEFYNAIKSGDNSKFLLYKNYQKIHDFPPFVKGSLEGSGVF 510 Query: 573 YTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYG---EYPNIQHNLKALEDVWDYSY 629 T+ F + + +ID A A GG I + E + ++++ +S Sbjct: 511 LTSGFQPPFD-GSSLAKQIDVSAKTQRFATGGSIQHIFLNEKTEGDVLARFIKNL--FSK 567 Query: 630 QHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGS---- 685 + + Y + C CG + + CP CG+ D ++ RV GY Sbjct: 568 RTIIYITITPTLTICNNCGRK----IVGERYVCPYCGSED---TTIYSRVIGYYRPIARK 620 Query: 686 ------------PDARPFNAGKQEEVKRRVK 704 + + G++ + R K Sbjct: 621 VIKAEKDKYLFEGEENYWQGGRRADWITRKK 651 >UniRef50_Q58242 Mja rnr-2 intein n=3 Tax=Methanococcales RepID=Y832_METJA Length = 1750 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 70/303 (23%), Positives = 137/303 (45%), Gaps = 18/303 (5%) Query: 249 EWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFV---TFGFGLGTSWESRL 305 + ++ D E + + I F S+ E+ + + T G E++L Sbjct: 771 DLSVEDNENFITATGILCHNTIFSSINLELEIPEFLKDKPAVIAGTTRGTYGDYEEEAKL 830 Query: 306 IQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDI 365 I E+++ + G K +FP + +R+ D N ++ + ++K P Sbjct: 831 ILEALVDVMMEGDAMG-KPFLFPNFIIKLREN---AFKDENKELMYKIHQLSAKFGIPYF 886 Query: 366 LNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEA 425 +N +VT + MGCR+ L + E N+ SLNLPRIA EA GD+ Sbjct: 887 INMLPDWQVTNT--NAMGCRTRLSGNWTGDAEIDTLRTGNMQWYSLNLPRIAYEANGDDT 944 Query: 426 TFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRA 485 +++L ERL + ++AL+ + + LY++ L + D ++ Sbjct: 945 KLFEILHERLEILKEALLIKHEVTKER-------LYVDNLMPF-LTQEFDGESYYRYENT 996 Query: 486 SISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTP 545 + + G++G++E + G E +++++ G ++E +R+ D+ KEETG +++ TP Sbjct: 997 TKTFGFVGLNEMLKYHLG-EELHESKDAVKFGEKVIEYIREYADKLKEETGLRWTVTQTP 1055 Query: 546 SEN 548 +E+ Sbjct: 1056 AES 1058 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 113/279 (40%), Gaps = 48/279 (17%) Query: 13 VPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSG 72 F E+I +A++R A D + +A V +++ ++ + + + ++++ Sbjct: 100 ESFDKEKIAKALIRETGA----DEETARKIADEVERELK---KLKVKYLTAPMIREIVN- 151 Query: 73 PYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLL 132 YK + + E RH K RL + + + + ENAN + + Sbjct: 152 -YKLIEYGFEELRH-------KHTRLGMPVYDITKLIKSGS-RENANLMYNPESIHK-WV 201 Query: 133 AGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMG- 191 A K YA + P+ + AH +GDIH HDL+Y+ P+ C+ DL+ G K+ Sbjct: 202 ADETMKQYALLAIFPKHIADAHIKGDIHLHDLEYAATRPV--CLQHDLRPFFKYGLKVDG 259 Query: 192 ----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTA 247 + +P K A A+++ +++ GG +I+ + LAP+V Sbjct: 260 TGLHTSVSKPAKHPEVAIQHAAKVMMAAQTNMSGGQSIDEFNVWLAPYVRG--------- 310 Query: 248 EEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANG 286 + ++ Q YE+N ++ A G Sbjct: 311 --------------LSYEKIKQLMQMFIYELNQMYVARG 335 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 73/188 (38%), Gaps = 28/188 (14%) Query: 534 ETGYGFSLYSTP----SEN------LCDRFCRLDTAEF-----GVVPGVT---DKGYYTN 575 E Y S+ T E RF RLD + VV G D YYTN Sbjct: 1567 EYVYDISVEGTENFIGGEGFICLHNTAGRFARLDYKYYKEETISVVRGDLNDVDSLYYTN 1626 Query: 576 SFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYS-YQHVPY 634 S H+ V+ + +K+ E + PL NGG I + + + L D+ H+ + Sbjct: 1627 SSHVRVDAPITLGEKVRIEEKFHPLCNGGHIMHIWNIESAADPEVLMDITKKITKTHIGF 1686 Query: 635 YGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAG 694 + + C CG C CG+ D ++ R+ GYL + +N Sbjct: 1687 WTYTKNLSVCNRCG----ISMGGLRDRCINCGSEDVAKF---SRITGYLQ--NISNWNRA 1737 Query: 695 KQEEVKRR 702 KQ+E++ R Sbjct: 1738 KQKELEDR 1745 >UniRef50_D2MLR7 ATP cone domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLR7_9FIRM Length = 511 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 76/363 (20%), Positives = 140/363 (38%), Gaps = 62/363 (17%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAA----KAAEVDDADYCATVAAVVSEQMQGRNQVDIN 59 V KRD F+ ++IK AI +A K D A A E + + + Sbjct: 3 KVKKRDNSLTEFEMDKIKTAIKKAFHGSKKRIHSSVLDLLAIRAVADFEDKMVDDVISVE 62 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 +IQ +VE+ L Y ++A+AYI YR + + RE ++ ++ + N Sbjct: 63 DIQDSVEHVLSECGYSEVAKAYILYRREHERIREIEEVNHRYLKDMERYLE-------GN 115 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDY-SPFFPMFNCMLI 178 ++ + + A + K Y + + R + +A +RG++ ++ +P+ ++ ++ Sbjct: 116 PENTIGGLILNHSAS-LTKLYWLEDIYDRSIREAVQRGELEIRGMEMMAPYSCKWDLSVL 174 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 KG+L+ K+G P K STA + + + + + +D +LAPFV Sbjct: 175 LEKGILSVQEKVGTL---PAKHFSTACSHIMNFVGIIQNEWVSVQSFEHVDTLLAPFVRK 231 Query: 239 SYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLG 298 D YA E + Q+L Y +N G+ PF F Sbjct: 232 ---------------DQLNYA------EIKQSIQTLVYGLNVPSRWGGRAPFSHFALDGD 270 Query: 299 T-----------------------SWESRLIQESILRNRIAGLGKNRKTAVFP-KLVFAI 334 S E+R I+++ + G G+ K +P ++ + Sbjct: 271 IPESFANKEVYIANKKENFVYGDLSEEARKIRQAFYEVLLEGDGEG-KPFAYPWISLYQL 329 Query: 335 RDG 337 DG Sbjct: 330 EDG 332 >UniRef50_UPI0001B41CA5 anaerobic ribonucleoside triphosphate reductase n=3 Tax=Listeria monocytogenes RepID=UPI0001B41CA5 Length = 180 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 77/173 (44%), Positives = 112/173 (64%), Gaps = 1/173 (0%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V+KRDG K F +I+ A+ + KA ++D + + V ++ + + I+EIQ Sbjct: 9 QMVIKRDGRKASFDLIKIRNAVEASMKAINLEDETFLEEILLEVVSELPNKADMTIDEIQ 68 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 VEN LM Y +ARAYIEYRHDRD ERE +++ + L+++ + +++NENANKD+ Sbjct: 69 HCVENTLMKSTYPDVARAYIEYRHDRDHERENITDMHKSVEKLLQK-DKTVVNENANKDA 127 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 V TQRDL AG VAK YA +++LP+ V AH +G+IH+HDLDYSP+ M NC Sbjct: 128 TVFNTQRDLTAGAVAKSYALKYMLPKHVSNAHLKGEIHFHDLDYSPYHAMTNC 180 >UniRef50_B9PEY4 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9PEY4_POPTR Length = 264 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 9/154 (5%) Query: 516 KGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--PGVTDKGYY 573 + +++ +R + +++E TG+ ++L +TP+E RF R D + + G D+ YY Sbjct: 1 MAMRLLDHVRGRIVEFQEATGHMYNLEATPAEGTTYRFAREDRKRWPDILQAGTADQPYY 60 Query: 574 TNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ--H 631 TNS L V +P++ + + GG + + + +A + + + + Sbjct: 61 TNSSQLPVGFTDDPFEALARQESLQSKYTGGTVLHLYMGERLSSGEACKRMVRRALESFR 120 Query: 632 VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKC 665 +PY C + G+ + CPKC Sbjct: 121 LPYITITPTFSVCPKHGY-----LAGEHRFCPKC 149 >UniRef50_A9A646 Regulatory protein ArsR n=4 Tax=Archaea RepID=A9A646_NITMS Length = 723 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 108/673 (16%), Positives = 229/673 (34%), Gaps = 118/673 (17%) Query: 11 CKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDINEIQTAVENQ 68 F S +I ++++R + + V ++ + + I+ V + Sbjct: 151 SIEEFNSHKIIQSLVRE----GSLPLELAQKITEEVENRIYKYQTTYLTGSLIREMVNSV 206 Query: 69 LMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQ 128 L+ + EYR+ + G +++ ++ + N D+ Sbjct: 207 LLEHGH-------EEYRNK----LARLGLPVFDVQEMITNLD--------NVDNGAE-GL 246 Query: 129 RDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGF 188 V + ++LP+DV +H GD+H + P + M +++K ++ G Sbjct: 247 LFKTGQTVFAEHLLTNILPKDVADSHLSGDLHITNPGIWSMIP--DTMFVNIKELIEDGI 304 Query: 189 KMGN-----AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKH 243 +G + I K + T+ + +++ ++ ++ + ++KH Sbjct: 305 DLGGKYLDVSRIPASKQLDEITSALSIVVSLLSKEASQEIILDGF--------VSLFSKH 356 Query: 244 RKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWES 303 K+ E +A + T + N + V+ LG+ + Sbjct: 357 SKSLPELEQKLTTAFATASTTSK-----------------YNKSSTNVSIRLQLGSDTK- 398 Query: 304 RLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYP 363 I SI+ + KL + GL + I ++ + Sbjct: 399 --IINSIINAYKN----------YTKLTPIPKIGLII--DNEKGKITDVSAAVS------ 438 Query: 364 DILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNL--GVISLNLPRIALEAK 421 +++ + G G S G+ NG G ++ +S+NLPR+A E+ Sbjct: 439 ------EIISLGGKVMFAKGQTSSHGIT---NGSTKSSGPLSIMLESVSINLPRLAFESN 489 Query: 422 GDEATFWKLLDERLVLARKALMTRIARLEGVKAR-VAPILYMEGACGVRLNADDDVSEIF 480 DE F L + A ++ R + + R + PIL ++ Sbjct: 490 KDETYFRARLALLMKPALSSMALRKKDISDLTRRGLNPILAKN-------------TQYM 536 Query: 481 KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFS 540 + S+ + +G+ E + + G DN++ R ++E + +E G + Sbjct: 537 QKSNVSLVINLVGLKEAVFNILG---FQDNKEGREILHKVIETAVDVGAKKGKELGDPVA 593 Query: 541 LYSTPSENLCDRFCRLDTAEFGVVPGVT--DKGYYTNSFHLDVEKKVNPYDKIDFEA--- 595 + T +E+ RF LD ++G + + Y+ +D + + K + + Sbjct: 594 ICMTETESAT-RFATLDGEKYGKNSSLNSMEGDSYSEGIIIDASEVSDYTAKSEPISECN 652 Query: 596 PYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFEC 655 L NGG + ++ + + + + I C ECGF E Sbjct: 653 KLSKLLNGG-LFVTLNIGKDAKPAEIKKAIEKTSELTTSFKPVQDIAICGECGFKDEPF- 710 Query: 656 TSKGFTCPKCGNH 668 CPKC + Sbjct: 711 ---EDKCPKCKSP 720 >UniRef50_C2WAD7 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Bacillus cereus Rock3-44 RepID=C2WAD7_BACCE Length = 170 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 1/151 (0%) Query: 98 LNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERG 157 L + +V L+ ENAN D + A AK+YA + LL V +A + Sbjct: 18 LMKMFETIVHGNEQDLMQENANVDGRSPMGMMGTFASESAKYYAIEQLLSEQVKKAISQN 77 Query: 158 DIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVAS 217 ++ HDLD+ C I L ML +GF G+ + P+ I +A A+++ I + Sbjct: 78 ILYPHDLDFYATG-TTTCSQIPLAQMLEKGFHTGHGHMRQPQDIKSALALSSIIFQANQN 136 Query: 218 HIYGGTTINRIDEVLAPFVTASYNKHRKTAE 248 +GG + D LAP+V ++ +++K E Sbjct: 137 MQHGGQSFALFDMDLAPYVRKTFERNKKKLE 167 >UniRef50_A3MYN5 Anaerobic ribonucleoside triphosphate reductase n=26 Tax=Bacteria RepID=A3MYN5_ACTP2 Length = 619 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 100/635 (15%), Positives = 196/635 (30%), Gaps = 99/635 (15%) Query: 88 RDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAG---------IVAK 138 + + E + + + S ++ NAN K I T + + V+ Sbjct: 5 QPNQLEGKLSFIEHYLHAKNAADGSKMDANANVTQKNIATMENEMMKDFFVQINRAKVSN 64 Query: 139 HYARQHLLPRDVV----QAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAE 194 A L ++ + E +I+ HD C+ + + L G E Sbjct: 65 KIA--ELFDEELAGEYLRQIESHEIYVHDE----TSLKPYCVSVTMYPFLHDGLTKLGGE 118 Query: 195 IEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPD 254 + PK +++ + V+S G F + + T Sbjct: 119 SKAPKHLASFCGSFVNFVFAVSSQFAGAVATVEFLTYFDYFARKDFGDNYLTTH------ 172 Query: 255 AEGYANSRTIKECYDAFQSLEYEVNTLHTANG-QTPFVTFGFGLGTSWESRLIQESILRN 313 E + Q + Y +N A G Q+ F + + + + Sbjct: 173 ---------RSEIENHLQQVVYSINQPAAARGYQSVFWNISLY-DKHYFEAMFGNFVFPD 222 Query: 314 RIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMY-PDILNYDQVV 372 TA +F ++ N ++ + ++ D DQ+ Sbjct: 223 FERP--NWETTAAL--QIFFMK-WFNQERSKAILTFPVVTAAMLTENGKCKDNEFADQMA 277 Query: 373 KVTGSFKT------------PMGCRSFLGVWENENGEQIHDG---RNNLGVISLNLPRIA 417 + + CR + ++ + G ++ VI++N+ R+ Sbjct: 278 EELSQGNSFFIYQSDNPDSLASCCRLRNEISDHTFSYSLGAGGVATGSINVITINMNRLV 337 Query: 418 LEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVS 477 + + E K + A + ++ +A G V + Sbjct: 338 QDGRDLEEE-----------VGKIHKYQYAYRKLMEEYLA-----AGMLPVYDAGFISLD 381 Query: 478 EIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGY 537 + F +++G G+ E G V N + ++ + +A ++ G Sbjct: 382 KQF------LTIGINGMAEAAE--SQGLTVGYNSDYMQFVQSRLKVIFEANQTASKKYGV 433 Query: 538 GFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDV-EKKVNPYDKIDFEAP 596 F+ P+ENL + + D A+ VP + Y NS+ V ++ N DK Sbjct: 434 KFNTEFVPAENLGVKNAKWDKADGYFVP----RDCY-NSYFYVVEDENTNALDKFLLHGK 488 Query: 597 -YPPLANGGFICYGEYPNI--QHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEF 653 +GG + Q ++L D+ + Y+ N I C EC + Sbjct: 489 ELIEWLDGGSALHLNLDEALTQSGYRSLLDI--AAKTGCNYFCINVKITICNECSHIDKR 546 Query: 654 ECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDA 688 +C KCG+ + + RV GYL A Sbjct: 547 TLC----SCSKCGSQN---IDYGTRVIGYLKRVSA 574 >UniRef50_C5VU72 Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Viruses RepID=C5VU72_9VIRU Length = 978 Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 118/308 (38%), Gaps = 37/308 (12%) Query: 404 NNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYME 463 + V ++N+ RIALE GD F +L R+ ++ K L + + + LY Sbjct: 697 GSCKVNTINMVRIALECNGDFNKFKDILKHRVDISHKYLKVQRDVIAKNIKKNLLPLYSH 756 Query: 464 GACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGE----HVYDNEQLRAKGIA 519 G N ++ +G G+ E I L G E V+ ++ + Sbjct: 757 GLMD------------MNNQFST--IGINGMFEAIKILGGIETTSTGVHYTDRGLSMAKD 802 Query: 520 IVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHL 579 I+E + + +++ GY ++ P+E+ + C+ D FG + Y N + + Sbjct: 803 ILETIGEMNKVTRKQYGYNANIEQIPAESASVKLCKKDKILFG---DRVNTYIYGNQW-I 858 Query: 580 DVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDY-SYQHVPYYGTN 638 + + + +++ + GG + + + + + +Y + Q V Y+ Sbjct: 859 PLNVQADLTERVRVASVLDKACGGGVMLHINLGERFKDEEQSWRMMNYLAKQGVVYFSFI 918 Query: 639 TPIDECY-ECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQE 697 I+ C + F G+ CP C + ++ GYL + + + + + Sbjct: 919 MKINVCENDHSFYGDM--------CPICHKPVSDS---YVKIVGYLVKQSS--YKSERAK 965 Query: 698 EVKRRVKH 705 E+ R + Sbjct: 966 EMDERKFY 973 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 68/202 (33%), Gaps = 28/202 (13%) Query: 107 EQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPR-----------DVVQAHE 155 + +++N+N K + + + K +R L + ++ Sbjct: 50 NNVANASIDDNSNVSDKNMTIMINESRKPLNKLLSRNKLYIEMKENFGKQVADEWLELQI 109 Query: 156 RGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFK-MGNAEIEPPKSISTATAVTAQIIAQ 214 G ++ HD S P C LK ++ +G + + + +P + + T + + IA Sbjct: 110 NGALYEHDAHDSSLKPY--CYAYSLKNVVDKGLYFIKDMKAKPAEHLDTYDSHVLEFIAY 167 Query: 215 VASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSL 274 + G I ++ ++ +K E + + +Q + Sbjct: 168 TTNLQSGAVGIPD-------YLIYAFYFWKKDIENGVVTKEQANKYRE------QHWQKM 214 Query: 275 EYEVNTLHTANG-QTPFVTFGF 295 + +N + G Q+ + F Sbjct: 215 LFSLNQPYLKGGEQSAYTNFSI 236 >UniRef50_A5M517 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Streptococcus RepID=A5M517_STRPN Length = 185 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 61/163 (37%), Positives = 85/163 (52%), Gaps = 11/163 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAA-------EVDDADYCATVAAVVSEQMQGRN 54 T V KRDG +V F ++I +A+ +AA E D + + + Sbjct: 13 TLFVEKRDGRRVVFDVDKIDKALHKAADKVIDVTPLVEKRLNDLTERIITEIHSRFPQG- 71 Query: 55 QVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLL 114 + I EIQ VE++L+ LA YI YR RD ER K +N I L+ + + +++ Sbjct: 72 -IKIYEIQNIVEHELLEAKEYALAEEYITYRTQRDFERSKATDINFSIHKLLNK-DQTVV 129 Query: 115 NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERG 157 NENANKDS V TQRDL AGIV K Q +LP+ V AH++G Sbjct: 130 NENANKDSDVFNTQRDLTAGIVGKSIGLQ-MLPKHVANAHQKG 171 >UniRef50_Q64EQ7 Oxygen-sensitive ribonucleoside-triphosphate reductase (Fragment) n=2 Tax=environmental samples RepID=Q64EQ7_9ARCH Length = 981 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 113/365 (30%), Gaps = 37/365 (10%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCAT-VAAVVSEQMQGRNQVDINE-IQ 62 +MK G K PF + I E + + KAA C + V + + + +D N + Sbjct: 620 IMKEYG-KSPFTPKNISELLNVSTKAAYEYVKRLCGRGLCKKVEKSTKYEHSIDYNYSLT 678 Query: 63 TAVENQ---LMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 + + + ++ I +E + +E + T+ Sbjct: 679 DKIFKKYEKVFKSL--KILSKLINGDVAFCKIKEIKKVGREETYDIATDTSTQNFIAGDG 736 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 + + I + Y LLP + AH GD+H HDL+Y F C D Sbjct: 737 FLFVHNTSHKKKADKICKEQYLL--LLPSKLADAHLSGDLHIHDLEY--FGTRGFCQDWD 792 Query: 180 LKGMLTQGF-----KMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 234 L+ G + P K A +I+ ++ GG +AP Sbjct: 793 LRYFFYYGLMPDGSGTKASVAGPAKKPEVAILHAVKILGSAQTNFAGGQGFFNFLTFIAP 852 Query: 235 FVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA---------- 284 + + + + + +R + + + Q Sbjct: 853 YFEGLSYGEIEQLMQMFVYEMTQMQVARGGQLVFSSVQ---LNPGIPKIWKDKPVVYKGA 909 Query: 285 ---NGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK 341 Q P T+G E RL ++++ + G K FPK AI + Sbjct: 910 ICNGEQAPLRTYG---DFEREVRLAFKALMNVMLQGD-YWGKPFNFPKPEVAIEPQFLKE 965 Query: 342 KGDPN 346 + N Sbjct: 966 DEEFN 970 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 85/462 (18%), Positives = 146/462 (31%), Gaps = 98/462 (21%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVS---EQMQGRNQVDI 58 VMKRDG VPF RI+ AI RA V D V V ++ I Sbjct: 3 VEKVMKRDGRIVPFDEGRIRWAIQRAMWEVGVRDEKLLDKVVKDVVGRINELYDGKIPHI 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE-----------IRGLVE 107 IQ VE +LM +A+AYI YR + RE++ ++ + I L Sbjct: 63 ENIQDIVELELMRNGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSINALRV 122 Query: 108 QTNASLLNENANKDSKVIPTQRDLLA-----GIVAKHYARQHLLPRDVVQAHERGDIHYH 162 + L+ N++ K+I + R+L ++ + ++ A Sbjct: 123 LASRYLMK---NEEGKIIESPRELFERVAILAVIPDLLYDDRVFSKEGGFAQ-------- 171 Query: 163 DLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGG 222 DL ++ + +G ++ + ++ G Sbjct: 172 DLKRVDYYREHL-------DEFDKKLSIGRFKLNK--------YHFERFLSLYQELAEKG 216 Query: 223 TTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLH 282 IDE++ +++K+ K EE+ + + + NT Sbjct: 217 QMKVSIDEIVKMLEDGAFDKYEKEIEEY-----------------FRLMTNQIFMPNTPA 259 Query: 283 TANGQTPFVTFG--FGLGTSWESRLIQESILRN-RIAGLGKNRKTAVFPKLVFAIRDGLN 339 N P F + + I ++ I +G G+N Sbjct: 260 LINAGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGGT--------------GVN 305 Query: 340 HKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS-----FLGVWENE 394 K P D+ AS +++ ++ G R L VW + Sbjct: 306 FSKLRPEGDLVGTTTGAASG-----PVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPD 360 Query: 395 NGEQIHDGRNNLGVISL---NLPRIALEAKGDEATFWKLLDE 433 + IH N+G L N+ + G FW+ L E Sbjct: 361 IEKFIHAKEKNIGTNVLSNFNI------SVGIWEDFWEALKE 396 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG----RNQV 56 M + KRDG VPF E+I AI +A +A D ++ V +++ Sbjct: 1 MIKKIRKRDGRIVPFNPEKITNAIWKAMQAVGEKDFSTAEKISKEVVRELERTLKPGEIP 60 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLN 115 D+ +IQ VE +L+ ++A+AYI YR R R+++ ++ + + + E +N Sbjct: 61 DVEQIQDIVERKLIEAGLARVAKAYILYRQKRAEIRKEKQQILNK-KEIDEVDKRFDIN 118 >UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YVI2_THEON Length = 910 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 91/461 (19%), Positives = 142/461 (30%), Gaps = 96/461 (20%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYC---ATVAAVVSEQMQGRNQVDI 58 VMKRDG VPF ERIK AI RA V D ++ I Sbjct: 3 VEKVMKRDGRIVPFDKERIKWAIQRAMLEVGVRDEKLLNRVVRRVVKRVNELYDGQVPHI 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE-----------IRGLVE 107 IQ VE +LM +A+AYI YR + RE++ ++ + I L Sbjct: 63 ENIQDIVELELMRVGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSINALRV 122 Query: 108 QTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYS 167 + L+ N+ ++I + R+L + L V G+ H+ D S Sbjct: 123 LASRYLIR---NEKGEIIESPRELFERVATLVVIPDLLYDERVFD--REGN---HEQDLS 174 Query: 168 PFFPMFNCMLIDLKGMLTQG-FKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTIN 226 L + L+ G FK+ Sbjct: 175 NVEKYME-KLDEYDRKLSIGRFKLNK---------------------------------Y 200 Query: 227 RIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKEC---YDAFQSLEYEVNTLHT 283 + +L + + K + + I E A + E + S + NT Sbjct: 201 HFERLLNLYRELAQKGQMKVSIDEVIGMLENGAFDKYEDEIEEYFRLMTSQTFMPNTPAL 260 Query: 284 ANGQTPFVTFG--FGLGTSWESRLIQESILRN-RIAGLGKNRKTAVFPKLVFAIRDGLNH 340 N P F + + I ++ I +G GLN Sbjct: 261 INSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGGT--------------GLNF 306 Query: 341 KKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS-----FLGVWENEN 395 K P D+ AS +++ ++ G R L VW + Sbjct: 307 SKLRPEGDLVGTTTGAASG-----PVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDI 361 Query: 396 GEQIHDGRNNLGVISL---NLPRIALEAKGDEATFWKLLDE 433 + IH N+G L N+ + G + FW+ L E Sbjct: 362 EKFIHAKEKNIGTNVLANFNI------SVGIWSDFWEALRE 396 >UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Methanomicrobia RepID=A0B8R8_METTP Length = 688 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 71/192 (36%), Gaps = 12/192 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR---NQVD 57 + + KRDG V F RI AI +A A + D +A V + + R Sbjct: 12 LVERIRKRDGRIVDFDPSRISRAISKAFNALGIVDEKTPVELAGRVVDVVDERFRDEIPS 71 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRG------RLNQEIRGLVEQTNA 111 + ++Q VE L+ Y Q+A+AYI YR R RE + L + + Sbjct: 72 VEDVQDIVEEVLIDAGYAQVAKAYILYRQRRSEIREAKHYLGVADDLKLSVNAIEVLKKR 131 Query: 112 SLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFP 171 L + + V+ T ++ + + A + D A ++ L + P P Sbjct: 132 YLKRD---EFGNVVETPGEMFERVASAVSAVERRYEGDADDARKKFLSMMRSLSFLPNSP 188 Query: 172 MFNCMLIDLKGM 183 + L + Sbjct: 189 TLMNAGLPLGQL 200 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 54/133 (40%), Gaps = 15/133 (11%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVS---EQMQGRNQVDI 58 VMKRDG VPF RI+ A+ RA V D V + ++ I Sbjct: 3 VEKVMKRDGRIVPFDESRIRWAVQRAMWEVGVRDERKLDEVVKNIVKRINELYDGKIPHI 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE-----------IRGLVE 107 IQ VE +LM ++A+AYI YR + RE++ R+ + I L Sbjct: 63 ENIQDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKRILNKKELDEIDKRFSINALRV 122 Query: 108 QTNASLLN-ENAN 119 + L EN N Sbjct: 123 LASRYLKRDENGN 135 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 80/459 (17%), Positives = 138/459 (30%), Gaps = 92/459 (20%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVS---EQMQGRNQVDI 58 VMKRDG VPF ERI+ AI RA V D V V ++ I Sbjct: 3 VEKVMKRDGRIVPFDRERIRWAIKRAMLEVGVHDDKLLNRVVRRVVRRINELYDGQVPHI 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE-----------IRGLVE 107 IQ VE +LM ++A+AYI YR + RE++ ++ + + L Sbjct: 63 ENIQDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKKILNKDRLDEIDKRFSLNALRV 122 Query: 108 QTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYS 167 + L+ N+ ++I + R+L + L V + G H DL Sbjct: 123 LASRYLIR---NEKGEIIESPRELFERVATLAVIPDLLYDERVYD--KNGK-HEQDLSRV 176 Query: 168 PFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINR 227 ++ + ++ + Sbjct: 177 KYYLE---------------------------HFEEFDGRYSIGRFKLNKY--------H 201 Query: 228 IDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANS---RTIKECYDAFQSLEYEVNTLHTA 284 + ++ + + K + + + E A ++E + + NT Sbjct: 202 FERLVNLYRELAEKGRMKVSIDEFLGMLENGAFDDYESEVEEYFRLMTGQVFMPNTPALI 261 Query: 285 NGQTPFVTFG--FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKK 342 N P F + + I ++ + GLN K Sbjct: 262 NSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKSGGGT-------------GLNFSK 308 Query: 343 GDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS-----FLGVWENENGE 397 P D AS +++ ++ G R L VW + + Sbjct: 309 LRPEGDFVGSTAGAASG-----PVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDIEK 363 Query: 398 QIHDGRNNLGVISL---NLPRIALEAKGDEATFWKLLDE 433 IH N+G L N+ + G FW+ L + Sbjct: 364 FIHAKEKNIGTNVLSNFNI------SVGIWEDFWEALRD 396 >UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=Thermococcaceae RepID=Q5JJ43_PYRKO Length = 1746 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 4/117 (3%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYC---ATVAAVVSEQMQGRNQVDI 58 VMKRDG VPF ERI+ AI RA V D ++ +I Sbjct: 3 VEKVMKRDGRIVPFDKERIRWAIQRAMLEVGVRDEKLLNRVVRRVVRRVNELYDGQIPNI 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLN 115 IQ VE +LM +A+AYI YR + RE++ ++ + L E LN Sbjct: 63 ENIQDIVELELMRAGLFDVAKAYILYRKKKAEIREEKKKILNK-DKLDEIDKRFSLN 118 >UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQG3_9EURY Length = 305 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 10/167 (5%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDINEI 61 V+KRDG V F ++I +AI++A + + V V E+++ ++ + +I Sbjct: 20 KVIKRDGRIVDFSEDKIFQAIMKAMNSIGGYGEEDAQRVTRKVVEKIKESRVERITVEKI 79 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRG------RLNQEIRGLVEQTNASLLN 115 Q VE LM Y +A++YI YR +R R+ + L + + LL Sbjct: 80 QDIVEETLMLEGYINVAKSYILYREERRKIRQAKKVIGVQDDLKLTVNAIKVLEARYLLK 139 Query: 116 -ENANK-DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIH 160 EN N ++ +R + + + ++ Q + D+ Sbjct: 140 DENGNVIETPRQMFERTARYLALVDIFYEDDIYDKEGKQKERKIDVE 186 >UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alkaliphilus RepID=A8MLU7_ALKOO Length = 784 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 4/146 (2%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQGR-NQVDINEI 61 VMKR+G V F +I AI +A ++ D + + + E++Q + + EI Sbjct: 3 QVMKRNGRLVEFNPSKITNAIKKAMAETKLGVDHNLSVKITEEIKEKIQNNAKPIHVEEI 62 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEI--RGLVEQTNASLLNENAN 119 Q VE LMS K +A+ YI YR++R R + ++++ + Q + N Sbjct: 63 QDIVEMLLMSSDRKDVAKRYIIYRNERAKIRANQKSSDEKLLTDEFISQYKHQIPPLNQL 122 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHL 145 + T L + Y + + Sbjct: 123 GNFVYYRTYSRWLQEEGRREYWWETV 148 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 5/112 (4%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAA----VVSEQMQGRNQVD 57 V+KRDG V F S RI+ AI A + D V V+ Sbjct: 3 VTKVVKRDGRVVEFDSFRIRRAIEMAMREVGKFDEAILDKVVKYVLDVIDSTFSDERPPH 62 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIER-EKRGRLNQEIRGLVEQ 108 + EIQ VE LM ++A+AYI YR +R+ R EK L ++ V++ Sbjct: 63 VEEIQDIVELALMKYDLFEVAKAYIVYRKEREKIRKEKMAILGKDYVDDVDK 114 >UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=Mycobacterium RepID=A1KG47_MYCBP Length = 710 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 118/568 (20%), Positives = 193/568 (33%), Gaps = 81/568 (14%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V +RDG VPF RI+ A+ RAA+ DD D TVA V++ + GR + +I Sbjct: 6 PAKVRRRDGTLVPFDIARIEAAVTRAAREVACDDPDMPGTVAKAVADAL-GRGIAPVEDI 64 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREK------RGRLNQEIRGLVEQTNASLLN 115 Q VE +L +AR YI YR R R R L + + LL+ Sbjct: 65 QDCVEARLGEAGLDDVARVYIIYRQRRAELRTAKALLGVRDELKLSLAAVTVLRERYLLH 124 Query: 116 ENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 + + ++ D A VA A P + ER +L++ P P Sbjct: 125 DEQGRPAESTGELMDRSARCVAA--AEDQYEPGSSRRWAERFATLLRNLEFLPNSPTLMN 182 Query: 176 MLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 DL G+L F + + +SI A++ GG T + Sbjct: 183 SGTDL-GLLAGCFVLPIEDSL--QSIFATLGQAAEL------QRAGGGTGYAFSHLRPAG 233 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF 295 + + + + A ++ +V+ + T Sbjct: 234 DRVASTGGTASGPVSFLRLYDSAAGVVSMGGRRRGACMAVLDVSHPDICDFVTAKAESPS 293 Query: 296 GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALE 355 L S + ++ LR K+V + P ++ + Sbjct: 294 ELPHFNLSVGVTDAFLRAVERNGLHRLVNPRTGKIVARM----------PAAELFDAICK 343 Query: 356 CASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGE--QIHDGRNNLGVISLNL 413 A P ++ D + + P+ R + N GE + NLG S+NL Sbjct: 344 AAHAGGDPGLVFLDTINR-----ANPVPGRGRIEA-TNPCGEVPLLPYESCNLG--SINL 395 Query: 414 PRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNAD 473 R+ A G W L+E +A + L + + P Sbjct: 396 ARM--LADGRVD--WDRLEEVAGVAVRFLD------DVIDVSRYPF-------------- 431 Query: 474 DDVSEIFKNGRAS--ISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAV--- 528 E+ + RA+ I LG +G+ E + AL G YD+E+ ++ R++QA Sbjct: 432 ---PELGEAARATRKIGLGVMGLAELLAAL-GIP--YDSEEAVRLATRLMRRIQQAAHTA 485 Query: 529 -DQWKEETGYGFSLYSTPSENLCDRFCR 555 + EE G + P+ RF R Sbjct: 486 SRRLAEERG------AFPAFTDS-RFAR 506 >UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=cellular organisms RepID=A9A645_NITMS Length = 884 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 5/104 (4%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR-----NQV 56 + KR G F ++I AI +A A D +A V ++ + Sbjct: 10 INEIRKRSGAVTAFNKDKISNAIYKALAATSKADRGLADQLADNVVNKLVEQGFTSTRSP 69 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 + +IQ VE+ L+ +A+AYI YRH+R R+++ ++ Sbjct: 70 TVEDIQDIVESTLIDSGNSDIAKAYIVYRHERRKLRDEKMKVLN 113 >UniRef50_A4VUA6 Oxygen-sensitive ribonucleoside-triphosphate reductase n=65 Tax=Streptococcus RepID=A4VUA6_STRSY Length = 124 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSE-----QMQGRNQV 56 V+KR G V F ++I +AI++AA+ V D + +A V + + + Sbjct: 12 FMQVIKRSGEIVEFDPDKIYQAIIKAAQTVYVIDETWRKNLAQVTKKVVLDLEEAHTERP 71 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGR 97 I+ +Q+ VE++L+ Y +A YI YR RD+ER G Sbjct: 72 TISMVQSQVEHRLLDAGYISIAEHYISYRLQRDLERNGYGD 112 >UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY Length = 762 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 95/565 (16%), Positives = 182/565 (32%), Gaps = 96/565 (16%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAA------EVDDADYCATVAAVVSEQMQ--G 52 M V+KRD KV F +I+ A+ +A K+ E + + ++++ G Sbjct: 1 MATVVIKRDDSKVDFDRTKIENAVFKAYKSVYDSNVKEAELRKRAENSTTDIVKEIEATG 60 Query: 53 RNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQ-------EIRGL 105 + ++ + EIQ VE LM + +A++YI YRH + R R L I L Sbjct: 61 KKEIRVEEIQDIVEKVLM-LKDQTVAKSYILYRHKKAEIRAFRASLGIPDDGLKLPINTL 119 Query: 106 VEQTNASLLN-------ENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGD 158 + + LL E+ + + K + L + A Sbjct: 120 IVLASRYLLKGPDGKIAESPKQLFTRVSHYIAAAEKKFGKSDDETNALEMEFYDA----- 174 Query: 159 IHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIE---PPKSISTATAVTAQIIAQV 215 + + P P ++ G K+G P + A + Sbjct: 175 --ITNFKFMPNSPT----------LMNAGTKLGQLSACFVLPVGDSIVEIFDAVKYAAII 222 Query: 216 ASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLE 275 H GG T + + + + T + P + ++ + Sbjct: 223 --HQSGGGTGFSFSRL-----RPTNDMVKSTGGVASGPVSFMKVFDIATEQVKQGGKRRG 275 Query: 276 YEVNTLHTANGQTPFVTFGFGLGTSWESRLIQ--ESILRNRIAGLGKNRKTAVFPKLVFA 333 + L + F R +I + L NR ++ Sbjct: 276 ANMGILRV--DHPSILDFIVAKENEGTLRNFNISVAITDEFMKALEANRD--------YS 325 Query: 334 IRDGLNHK-KGDPNYD-IKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 + + N K G N + L + A K P ++ D++ S+ P+ LG Sbjct: 326 LVNPRNGKVVGKLNARAVWNLIITMAWKTGDPGLVFLDRI---NSSYSNPV---PTLGPV 379 Query: 392 E--NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARL 449 E N GEQ ++ + S+N+ ++ + G W L + + L Sbjct: 380 ESTNPCGEQPLYPYDSCNLGSINMAKMLKKNDGQYDIDWDELKRITRMGVRFLD------ 433 Query: 450 EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYD 509 +++ P L +DV++ + I LG +G + + L YD Sbjct: 434 NVIESNTYP-----------LKEIEDVTKKIRR----IGLGIMGWADMLIKLGIR---YD 475 Query: 510 NEQLRAKGIAIVERLRQAVDQWKEE 534 + + ++ + + + EE Sbjct: 476 SNEALMLAEKVMSFITENARKMSEE 500 >UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=6 Tax=Clostridium difficile RepID=Q18BC3_CLOD6 Length = 729 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 97/567 (17%), Positives = 186/567 (32%), Gaps = 88/567 (15%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAA-KAAEVDDADYCATVAAVVSEQMQGRNQ-VDINE 60 +++KRDG K F +I++A+ +A+ + D + ++ ++ + + + E Sbjct: 2 KYIIKRDGTKELFSKSKIEDAVYKASINSEGGVDRELAYDISRKIANDYNSMEKCLSVEE 61 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKR---GRLNQEIRGLVEQTNASLLNEN 117 IQ VE LM K +A+ YI YR R R K L + I + N +E Sbjct: 62 IQDIVEVLLMESNRKDIAKHYILYRERRSEIRTKAWEFDELQKSIWKNKYRHNGESFDEW 121 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 + S + ++K ++ L + N Sbjct: 122 IKRISNN--------SSRISKLIRQKRFL--------------------FAGRILAN--- 150 Query: 178 IDLKGMLTQGFKMGNA---EIEPPKS-----ISTATAVTAQIIAQVASHIYGGTTINRID 229 +G+ +G K+ + IEPPK TA + GG I+ Sbjct: 151 ---RGLQKEGKKVTYSNCYVIEPPKDSIEDIFDTAKKLARTF------SYGGGVGIDI-- 199 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTP 289 L P N + T + + + + +VN Sbjct: 200 SKLRPKGAKVNNAAKHTTGAVSFMELYSMTTGLIGQRGRRGALMISMDVNHP-------- 251 Query: 290 FVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPN-YD 348 + + T E +R + R+ ++ F + N YD Sbjct: 252 EIEDFIDIKTDLEKVTKANISVRVTDEFMQAVREKKLY-NCTFEVETTGEKIVKIVNAYD 310 Query: 349 IKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGV 408 + ++ P IL +D++ T +F + ++F N E+ + + Sbjct: 311 LFNKFVKNNWDYAEPGILFWDKI--KTYNFMSED--KNFCFSGVNPCAEEPLPSGGSCLL 366 Query: 409 ISLNLPRIALEAKGDEATFWKLLDERLVLARKA-------LMTRIARLEGVKARVAPILY 461 S+NL ++ G+ ATF +++ R+A L + + R + Y Sbjct: 367 GSINLSEFIIQPFGEHATF--DINKLKSCVREAVVALNDVLDEGLNLHPLQEQRDSVHKY 424 Query: 462 MEGACGVRLNADDDVSEIFKNGRASI-----SLGYIGIHETIN--ALFGGEHVYDNEQLR 514 + GV AD + + G +G ++E + AL E+ +E Sbjct: 425 RQIGLGVMGIADMLIKMGIRYGSDESLELCDLIGKTMLNEAVKQSALIAKEYGTFSEYKY 484 Query: 515 A---KGIAIVERLRQAVDQWKEETGYG 538 K +E L + + ++ G Sbjct: 485 ENISKSKFFIENLNEDTKEMVKKYGLR 511 >UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Chloroflexi (class) RepID=A7NFN4_ROSCS Length = 769 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR---NQVD 57 + ++KRDG VPF RI+ A+ R + +A V + + Sbjct: 26 VPTTIIKRDGRVVPFDVTRIENAMARCFASFGRTPDTPIPELAQRVVNIVAAKSQGKPPT 85 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEY 84 + +Q VE L + + A+ YI Y Sbjct: 86 VEGVQDIVEMVLQAAGEFEAAKRYILY 112 >UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=cellular organisms RepID=B2SYU1_BURPP Length = 1001 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 11/118 (9%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEV-------DDADYCATVAAVVSEQM----QG 52 V++R+G V F+ +I A+ +A A + + V + Sbjct: 39 KVIRRNGSVVSFEPSKIAIAVTKAFLAVNGGQGAASARVRELVEQLTQNVVRALVRSRPN 98 Query: 53 RNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTN 110 I +IQ VE LM G +ARAY+ YR R R ++ GL N Sbjct: 99 GGTFHIEDIQDQVELALMRGGEHNVARAYVLYREKRTQARGHDDQIVANTPGLNVTDN 156 >UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=cellular organisms RepID=B4E5V9_BURCJ Length = 1003 Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVS-----------EQMQG 52 V++R+G V F+ +I A+ +A A A V V Sbjct: 41 KVIRRNGSVVSFEPSKIAIAVTKAFLAVNGGQGAASARVREQVEQLTHNVVRALVRSRPN 100 Query: 53 RNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREK 94 I +IQ VE LM G +ARAY+ YR R +ER+ Sbjct: 101 GGTFHIEDIQDQVELALMRGGEHNVARAYVLYREKRHLERQH 142 >UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=cellular organisms RepID=C1DPR2_AZOVD Length = 1338 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSE-----------QMQGR 53 V+KR+G V + ++I AI +A A E A + + V+ +M Sbjct: 34 VIKRNGTVVAYTDDKITVAITKAFLAVEGGTAAASSRIHETVARLTEQVTTTFRRRMPSG 93 Query: 54 NQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 + I EIQ VE LM ++AR Y+ YR R ER++ + + Sbjct: 94 GTIHIEEIQDQVELALMRAGEHKVARDYVIYREARAQERKRAAAVQE 140 >UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Bacteria RepID=C8WK91_EGGLE Length = 845 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 6/101 (5%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAE-VDDADYCATVAAVVSEQMQGRNQ-----VD 57 + KR+G +++ +IK A+ A + V D + + A + M Q V Sbjct: 2 QISKRNGTVEAYEAGKIKRAMGAAFASVGKVLDDEEADRLIARIERAMASAEQGEGGSVS 61 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRL 98 + ++Q VE LM + + ++YI YR DR +R R RL Sbjct: 62 VEDVQDLVERALMEANHYEELKSYILYREDRARKRVARERL 102 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 13/104 (12%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDD-------------ADYCATVAAVVSEQM 50 ++KR+G VPF RI +A+ A + D V V +++ Sbjct: 10 TIVKRNGMFVPFDRNRIFQALEAAFRDTRRIDDHMPLPEDLESSIRSITHQVVKEVVQKI 69 Query: 51 QGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREK 94 V + IQ VE+QL + +AR YI YR DR R+K Sbjct: 70 TDGQVVTVERIQDMVESQLYVNGLQDVARDYIVYRDDRKAHRKK 113 Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 16/141 (11%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG------------ 52 V++R G V F +I A+ +A +A + + ++V ++ Q Sbjct: 120 VVRRCGTVVHFNPMKISAALEKAFRATDKTEGMTPSSVREEINALTQNIVAEIEECCPQQ 179 Query: 53 RNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNAS 112 ++DI +IQ VE QLM + +A+ YI YR R R+ R + + E+ Sbjct: 180 DRRIDIEKIQDIVEQQLMVVGHYAVAKNYILYREARARVRDNREEDGSTEKTIAEEAVEV 239 Query: 113 LLNENANKDSKVIPTQRDLLA 133 L + S T LLA Sbjct: 240 LSKD----GSTYTMTHSQLLA 256 >UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alpha n=48 Tax=Bacteria RepID=RIR1_TREPA Length = 845 Score = 76.2 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEV----DDADYCATVAAVVSEQMQGRN----Q 55 H++KR+G P+ E+I AI A ++ + + +AA V Q+ N Sbjct: 2 HIIKRNGEPQPYMREKIIVAISAAFRSVQNPLAPEVPAIITDLAAEVERQLFEMNRAGVP 61 Query: 56 VDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRL 98 V + +IQ VE L + +++I YR DR +R R ++ Sbjct: 62 VHVEKIQDFVEKTLTKYNHSDEVKSFILYRDDRTKKRIAREQI 104 >UniRef50_B0KB73 ATP-cone domain protein n=4 Tax=Thermoanaerobacter RepID=B0KB73_THEP3 Length = 85 Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 3/84 (3%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQ--GRNQVDINE 60 V+KRDG F ++I +I A+ A + +A + + ++ G+ Q+ +E Sbjct: 2 KVIKRDGRLQEFDLDKIIRSIGAASDDAGKPLNTSDLHNIARDIEKSIKKLGKEQISFDE 61 Query: 61 IQTAVENQLMSGPYKQLARAYIEY 84 I+T V + L +K +A+AY+ + Sbjct: 62 IRTIVIDALEKNGFKDVAKAYMNF 85 >UniRef50_B1ZWW1 ATP-cone domain protein n=2 Tax=Opitutaceae RepID=B1ZWW1_OPITP Length = 842 Score = 68.5 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 23/114 (20%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDA-----------------------DYCAT 41 V+KRDG KV F ++ A+ A D+A Sbjct: 39 VIKRDGSKVRFDQSKVTRALALAFHEVRTDNAPNPYRDHLLACFGLDTETFNEVSRISGA 98 Query: 42 VAAVVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKR 95 VA ++ + I ++Q A E + + + ++ARAY+ YR R Sbjct: 99 VAQMLELYYRDGKHPSIEQVQDAAEKAIAAAGHWEVARAYMLYRARHAERRLAH 152 >UniRef50_Q2FSI0 Oxygen-sensitive ribonucleoside-triphosphate reductase-like n=4 Tax=Methanomicrobiales RepID=Q2FSI0_METHJ Length = 120 Score = 65.8 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 15/66 (22%) Query: 640 PIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEV 699 I+ C CG CP+CG HD ++ RV GYL D +NAGKQ+E+ Sbjct: 67 TIEYCPLCG----------EPVCPECGCHDVVQI---SRVTGYLQ--DVSGWNAGKQQEL 111 Query: 700 KRRVKH 705 K R ++ Sbjct: 112 KDRQRY 117 >UniRef50_UPI00003827C9 COG1328: Oxygen-sensitive ribonucleoside-triphosphate reductase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003827C9 Length = 96 Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 6/76 (7%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDD----ADYCATVAAVVSEQMQGR--NQ 55 T V+KRDG + PF RI+ A+ +A D A V V ++ R Sbjct: 17 TLEVLKRDGRRRPFDDARIRAAVTKAFAEVHGDLTATHRRRVAEVVDRVDAEIAARFDAT 76 Query: 56 VDINEIQTAVENQLMS 71 V I EIQ VE+ L+ Sbjct: 77 VKIYEIQGVVEHVLLD 92 >UniRef50_A2RN49 High confidence in function and specificity n=4 Tax=Lactococcus lactis RepID=A2RN49_LACLM Length = 105 Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADY-----CATVAAVVSEQMQGR--NQVD 57 V+KR+G V + S RI+ A+ +AA + D V VV + + +++ Sbjct: 10 VIKRNGHVVDWDSFRIQTAVFKAAINGKYKDKPLHANMIANNVTKVVEKVIAELSFEKIE 69 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIER 92 I IQ V QL + K +AR ++ Y+ ++IE+ Sbjct: 70 IETIQNQVIKQL-NDFDKDVARDFLAYKTKQNIEQ 103 >UniRef50_B9Y9Q5 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9Q5_9FIRM Length = 503 Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 93/506 (18%), Positives = 153/506 (30%), Gaps = 112/506 (22%) Query: 147 PRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATA 206 + +Q G +P+ P + C D K ++ +G + PP+ + AT Sbjct: 37 SPEYLQGEREGIFCDLGEGLAPYRPRYIC--PDYKQLMEKG--SPFLGLTPPQDLLEATN 92 Query: 207 VTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKE 266 + V S + +DE+L PFV + K + + + + Sbjct: 93 ALLIMYHHVPSITSFPVYLGNLDELLEPFVLKETPQRAKQILKMFLLHID--------RT 144 Query: 267 CYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAV 326 D+F V G S LI E L + + A+ Sbjct: 145 LTDSF-------------------VHADLGPQASRTGELILE---------LTEEMQCAM 176 Query: 327 FPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS 386 P L L + + D + C K P N+ + G C Sbjct: 177 -PNLT------LKYDSQQTSDDFLKRCALCMLKTAKPSFANHAMFTREWGENYAIASCY- 228 Query: 387 FLGVWENENGEQIHDGRNNLGVISLNLPRI-----ALEAKGDEATFWK-LLDERLVLARK 440 NG ++ G G LPRI +L+AK D F +L + + + Sbjct: 229 --------NGLKVGGG----GFT---LPRIRLYECSLKAK-DPQDFLDNVLPRYVQIMLE 272 Query: 441 ALMTRIARLEGVKAR-VAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETIN 499 + RI + A A L EG K + G +G+ E +N Sbjct: 273 MMEDRIRFIVETSAFFKANFLVTEG--------------FVKLENFTGMFGMVGLAECVN 318 Query: 500 ALFGGEH----VYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCR 555 L G E +N Q G+ I++RL V + + F Sbjct: 319 HLLGIEDPRRGYGNNVQADDLGVKILQRLSDLVAGFTSAY----------CDGTDHHF-- 366 Query: 556 LDTAEFGVVPGVTDKGYYTNS--FHLDVEKKVNPYDKIDFEAPYPPLA-NG-GFICYGEY 611 A+ G+ + NS + V + +I A G G I E Sbjct: 367 RLHAQVGIDSDGRE-----NSPGARIPVGAEPGMLKQIQHAARMHGFFPTGIGDIFKFEE 421 Query: 612 PNIQHNLKALEDVWD-YSYQHVPYYG 636 + +AL D+ + Y+ Sbjct: 422 T-WLNTPEALGDIIKGAMASGMRYFS 446 >UniRef50_B0PG79 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PG79_9FIRM Length = 514 Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 86/504 (17%), Positives = 158/504 (31%), Gaps = 112/504 (22%) Query: 162 HDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYG 221 H+ ++P P + +L D + + +G + P++++ A A V S + Sbjct: 56 HNDGHAPLCPRY--ILPDYERFMERGCDF--LRLPAPRTLAEALASLTIFYTHVPSITHF 111 Query: 222 GTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTL 281 I R+D +L PFV A + + + + D+F Sbjct: 112 PVYIGRLDRLLEPFVQAVGRAQAREPLRLFLIGLD--------RIIGDSF---------- 153 Query: 282 HTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK 341 G + LI E + + A P L Sbjct: 154 ---------CHANIGPEQTVTGELIVELLPELQNAV----------PNLTLLY------- 187 Query: 342 KGDPNYDIKQLALECASKRM---YPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQ 398 DP A+ C S + P G C NG Sbjct: 188 --DPAVTPDDFAIRCISCALRCANPAFAFDPYYRARIGEQYGIASCY---------NGLY 236 Query: 399 IHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARL-EGVKARVA 457 + G +L + L +IA G + F+ L E + A + + +I + E + + Sbjct: 237 VGGGAFSLS--RIRLGKIAERCTGPDDFFFNRLPESVDAACRFMEAKIRFIAEEIPFFKS 294 Query: 458 PILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALF----GGEHVYDNEQL 513 L EG L+ D V G +G++E +N L +E+ Sbjct: 295 NFLVREGF----LHRDKFVG----------LFGLVGMNECVNTLMDLSGDTGRYGPDERA 340 Query: 514 RAKGIAIVERLRQAVDQWKEET----GYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTD 569 G+ I+E + + V ++ G+ F L++ D GV PGV Sbjct: 341 NQLGLRIMESIEKQVQAFESRYCAVNGHRFLLHAQVG-------AVGDN---GVTPGVR- 389 Query: 570 KGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGF--ICYGEYPNIQHNLKALEDVWDY 627 + + ++ YD + + G I + +Q N A+ D++ Sbjct: 390 ---------IAIGSELPLYDHLRQAGLFHHFFPSGVGDIFPFDQTAVQ-NPAAVLDIFKG 439 Query: 628 SYQ-HVPYY-GTNTPIDECYECGF 649 +++ + Y + D G+ Sbjct: 440 AFRCGMQYISTYESASDVIRVTGY 463 >UniRef50_Q3ADQ8 Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ8_CARHZ Length = 511 Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 83/554 (14%), Positives = 173/554 (31%), Gaps = 114/554 (20%) Query: 93 EKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQ 152 + R + ++ T+ ++ ++ + + A+ Y Q +L Sbjct: 7 SRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGILCDLF-- 64 Query: 153 AHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQII 212 ++P+ P + +L D + + +G + N ++PP+ + A I Sbjct: 65 -----------EGHAPYRPRY--ILPDYQKFMEKGSEYLN--LKPPQDLFEAVNALLIIY 109 Query: 213 AQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQ 272 V S + ++DE L PFV A+ + + + + + + D F Sbjct: 110 RYVPSITSYPVYLGQVDEHLEPFVLAAGEELSEKLLKMFLVQID--------RVLPDGF- 160 Query: 273 SLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVF 332 V G + RLI + L + K AV P + Sbjct: 161 ------------------VHMNIGPKDTRTGRLILK---------LERELKQAV-PNI-- 190 Query: 333 AIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE 392 L + + P+ A++ A + P +N ++ + C Sbjct: 191 ----SLKYNEETPD-SFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCY------- 238 Query: 393 NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARL-EG 451 + G + ++ LNL A +A+ + +L + ++ + + R + E Sbjct: 239 ----NTLLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEE 294 Query: 452 VKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNE 511 K L EG + R + GY G++E I L G + D E Sbjct: 295 AKFFETSFLAKEGLISL--------------ARFTSMAGYFGLYECIEHLTGLKLGKDKE 340 Query: 512 QLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSE---NLCDRFCRLDTAEFGVVPGVT 568 L +++ + +L S P R F G+ Sbjct: 341 ALY-YAEQVLKTAKD-------------TLESVPGAYCYGTGGRIG------FHAQSGID 380 Query: 569 DKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFIC--YGEYPNIQHNLKALEDVWD 626 T + ++ + + +I E + G I Y + N + + + Sbjct: 381 SDIDVTPGVRIKYGEEPDIFTQIKTEGRLHKYFDTG-ISDIYIFDRTARENPEGVLKIIK 439 Query: 627 YS-YQHVPYYGTNT 639 + + + + NT Sbjct: 440 GALKEGIRVFSFNT 453 >UniRef50_C5EWH7 Putative uncharacterized protein n=2 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWH7_9FIRM Length = 499 Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 82/429 (19%), Positives = 135/429 (31%), Gaps = 95/429 (22%) Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYS----PFFPMFNCM 176 + KV QR +A++ + E G + +D P+ + Sbjct: 16 NPKVTFNQRLKDMAKIAENSIELVNYTELSRKYFENGAM----MDMFEGKTPYRTRY--C 69 Query: 177 LIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 L D + L QG + +EPPK I A + + + I +D +L PFV Sbjct: 70 LPDYERFLKQGSEF--LMLEPPKDIWDAVGNLLCLYHNIPADGGLAVYIGCLDRLLEPFV 127 Query: 237 TASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFG 296 +E A + + + +AF G Sbjct: 128 K----------DEDEARKAIRFLLTHVDRTISNAF-------------------CHADLG 158 Query: 297 LGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALEC 356 + R+I E L K + P + R+ D + ALE Sbjct: 159 PEDTRAGRIILE---------LTKEMQRP-CPNMTLMYREDTPD-------DYMKAALET 201 Query: 357 ASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLN---L 413 A P N D + + + C + G L ++ LN L Sbjct: 202 AMVSSKPSFAN-DALYRRDMGDYAVVSCY-----------NTLPIGGCGLTLVRLNMDQL 249 Query: 414 PRIALEAKGDEATFWKL-LDERLVLARKALMTRIARLEGVKARVAP-ILYMEGACGVRLN 471 PR+A D + E + A+ +R + LY EG + + Sbjct: 250 PRLA----TDPEDLLNRVIPEAVTAVCDAIDSRCEFIVDYCHYYENTFLYREGLI--KKD 303 Query: 472 ADDDVSEIFKNGRASISLGYIGIHETINALFG----GEHVYDNEQLRAKGIAIVERLRQA 527 D V G++G+ E +N + G E E+ A G AI+ER+RQ Sbjct: 304 RDHMVGM----------FGFVGLAECVNGILGLTDEKERFGHGEKADALGEAIMERIRQE 353 Query: 528 VDQWKEETG 536 +D+ + G Sbjct: 354 IDRRPAKYG 362 >UniRef50_A3DFS4 Putative uncharacterized protein n=22 Tax=Clostridium RepID=A3DFS4_CLOTH Length = 514 Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 67/486 (13%), Positives = 140/486 (28%), Gaps = 91/486 (18%) Query: 163 DLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGG 222 + ++P P + ++ D + +G + ++ PP + A V S Sbjct: 68 NEGHAPLRPRY--IIPDYAKFMKEGSRF--LQLAPPTDLYEALNSLLIFYKHVPSVTNFP 123 Query: 223 TTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLH 282 + ++D +L PF+ + K + + D+F Sbjct: 124 VYLGQLDTLLEPFMQDVDDTTAKKLLRGFL--------VHVDRTILDSFS---------- 165 Query: 283 TANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKK 342 G + RL+ E A P L +G+ Sbjct: 166 ---------HANIGPKPTRTGRLLLEVEAELTQAV----------PNLTLKYEEGVTDD- 205 Query: 343 GDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDG 402 D A++ A + P N+ + G C + G Sbjct: 206 -----DFAIQAVKTALRSAKPSFANHRMFTQELGENYVIASCY-----------NGLPLG 249 Query: 403 RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIAR-LEGVKARVAPILY 461 + + L L IA A G E L + + + + +RI +E L Sbjct: 250 GGSYTLCRLILGNIAKRAGGIEDFRTNQLPYVMDIMARYMDSRIRFEVEESGFFENNFLA 309 Query: 462 MEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIV 521 EG + R + G +G+ E +N L E + Sbjct: 310 REGFISRK--------------RFTAMFGLVGLAECVNILLEKEGRPGRFGHDEYATELG 355 Query: 522 ERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDV 581 E + + + ++ E+ + E F L A+ G+ + + Sbjct: 356 ESIIKQIYEFSEKHHNPY------CEITGGHF--LLHAQVGISEDQNISP----GTRIPI 403 Query: 582 EKKVN-PYDKIDFEAPYPPLANGGF--ICYGEYP---NIQHNLKALEDVWDYSYQHVPYY 635 ++ + D + + G I + N ++ L ++ + +++ +Y Sbjct: 404 GEEPDEMIDHLMVVNHFHKYFPSGTGDIFPIDVTVHQNPEYVLDIVKGSFRKELRYLSFY 463 Query: 636 GTNTPI 641 N+ + Sbjct: 464 EKNSDV 469 >UniRef50_Q2JVG1 Transcriptional repressor nrdR n=7 Tax=Bacteria RepID=NRDR_SYNJA Length = 200 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 13/142 (9%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSE--QMQGRNQVDI 58 M V+KRDG + F +I + ++RA + +V + + E Q++ +V Sbjct: 47 MPIMVIKRDGSRESFNRNKILQGVMRACQKTQVSVKQM-EELVNEIEEKLQLEDVQEVTT 105 Query: 59 NEIQTAV---ENQLMSGPYKQLARAYIEYRHDRDI--EREKRGRLNQEIRGLVEQTNASL 113 I V +L Y + A Y +++ +D E E+ RL +R +E+ Sbjct: 106 LRIGEMVLERLQRLSEVAYVRFASVYRKFQGIKDFVTELEQLERLETHLRRDLERPLR-- 163 Query: 114 LNENANKDSKVIPTQRDLLAGI 135 N+ D + GI Sbjct: 164 ---NSPPSESESTASPDWVGGI 182 >UniRef50_B6WBR4 Putative uncharacterized protein n=2 Tax=Anaerococcus RepID=B6WBR4_9FIRM Length = 130 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 3/84 (3%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM---QGRNQVDINE 60 +V KR+G F E+I +I AA+ ++ ++ E++ + Sbjct: 43 YVKKRNGKIELFDVEKISRSIKNAARNGNIELNTSDISILKNDLEKIIKKNHHRILPTAT 102 Query: 61 IQTAVENQLMSGPYKQLARAYIEY 84 I+ VEN L YK++ +Y Y Sbjct: 103 IKEYVENILEEDGYKKVLESYTSY 126 >UniRef50_C9KLA5 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLA5_9FIRM Length = 94 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Query: 670 ASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 + RR+ GYL R +N K+ E RVKH Sbjct: 57 PQKFERIRRITGYLVGTIDR-WNDAKRAEEHDRVKH 91 >UniRef50_A1SHU8 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SHU8_NOCSJ Length = 515 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 75/507 (14%), Positives = 146/507 (28%), Gaps = 103/507 (20%) Query: 140 YARQHLLPRDVVQAHERG-------DIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGN 192 A L P +V A D++ + + P + +L D +L G Sbjct: 31 LAENSLEPPEVSAACAEALDKRIICDMYEGNAPHRPRY-----LLPDFALLLRNGSAF-- 83 Query: 193 AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNI 252 E+ P + A A +QV S + +D +L P+V Sbjct: 84 LELGPATDLDEALATLLIGYSQVPSITGYPVWLGDLDALLEPYVEGV------------- 130 Query: 253 PDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRL---IQES 309 + +E + + ++ + F G S R+ ++ Sbjct: 131 ----------SEEELHRKLRLFWISLDRMFP----DAFTHANLGPDDSRVGRMALRLERE 176 Query: 310 ILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYD 369 +L+ P L +++ D D + C P +N+ Sbjct: 177 LLQVV-------------PNL--SLKVDPERTPDDYVRDAVETVFAC----GKPHFVNHP 217 Query: 370 QVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFW- 428 +V G+ + C + G + + LNL +AL +G+ +F Sbjct: 218 MMVGDLGAAYGVVSCY-----------NSLVAGGGSHTLTRLNLREVALRHEGERTSFLD 266 Query: 429 KLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASIS 488 +LL + L + + RI L +AR ++ + R + Sbjct: 267 ELLPRYVELTAELMEARIRHLVE-EARFFEHSWL------------VTDGLLHLDRYAAM 313 Query: 489 LGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSEN 548 G G+ E ++ + E V + ++ V + + E Sbjct: 314 FGVYGLAEAVSIVLEHEGVEARYGHDDVADELALQILTRVHELVAARPMPY------CEG 367 Query: 549 LCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY 608 R + GVT + V + + + P L G I Sbjct: 368 NGGRAFLHSQSGIDSDLGVTA------GCRIPVGDEPDLLRHLRTITPNHALFPAG-ISD 420 Query: 609 G--EYPNIQHNLKALEDVWDYSYQHVP 633 + N A+ DV +++ Sbjct: 421 VLAFDDTARRNPDAVVDVIRGAFRTGM 447 >UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Sulfolobaceae RepID=C3N5F1_SULIA Length = 838 Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 13/87 (14%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 V+KRDG FK E+I K + V D V V + N +D I Sbjct: 14 KVIKRDGRVDEFKLEKILS------KLSSVPDEVTDGIVNDVQANV--KDNAIDTRAIAD 65 Query: 64 AVENQLMSGPYK-----QLARAYIEYR 85 VE L+ K +LA+ Y+ R Sbjct: 66 IVERNLIENSLKYPFLMELAKRYVLAR 92 >UniRef50_C7RFT0 Putative uncharacterized protein n=2 Tax=Anaerococcus RepID=C7RFT0_ANAPD Length = 132 Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKA--AEVDDADYCATVAAVVSEQMQGRNQV-DIN 59 +V+KR G F ++I+ +I AA A ++ +D V V+ +V + Sbjct: 44 TYVIKRSGSVEKFSKDKIERSIKNAAGDEKAAMNTSDLAIIVDDVLDTLDSDPRKVYKTS 103 Query: 60 EIQTAVENQLMSGPYKQLARAYIEY 84 EI+ +++ L+ Y ++ ++I Y Sbjct: 104 EIKNYIKDSLLKEGYSKVYDSFISY 128 >UniRef50_B1L7E4 ATP-cone domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7E4_KORCO Length = 115 Score = 52.3 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V KR+G + F +I A+++A + E+ D +A + +GR V+ +EI+ Sbjct: 32 TKVRKRNGKEEDFSKMKIVSALIKAGSSVELADK-----IAEECESKFRGREYVESSEIR 86 Query: 63 TAVENQL 69 V ++L Sbjct: 87 EFVLSRL 93 >UniRef50_B8ILE2 Transcriptional repressor nrdR n=96 Tax=Proteobacteria RepID=NRDR_METNO Length = 193 Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 6/94 (6%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI--NEI 61 V+KR G KVPF ++++ +I A + V ++D + + ++ Q++ + ++ I Sbjct: 50 TVVKRSGRKVPFDRDKLQRSIDVALRKRSV-ESDRIERLVSGITRQLESSGEPEVTSEAI 108 Query: 62 QTAVE---NQLMSGPYKQLARAYIEYRHDRDIER 92 V L Y + A Y +R +D E Sbjct: 109 GELVMEGLKGLDDVAYVRFASVYKNFREAKDFEE 142 >UniRef50_B1H0N3 Putative ribonucleoside-triphosphate reductase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0N3_UNCTG Length = 59 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 + + ++ V RV GYL + +N GK+EE K R + Sbjct: 19 SVEGTKCEVYSRVVGYLRPVAS--WNEGKREEFKIRKNYC 56 >UniRef50_Q1D346 Transcriptional repressor nrdR n=215 Tax=Bacteria RepID=NRDR_MYXXD Length = 168 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI-- 58 + P ++K+DG + F E+I + +A + V AD + Q+QG + ++ Sbjct: 47 LYPLIVKKDGRREAFDREKIVNGLKKACEKRPVS-ADQLEETVVAIERQLQGMGEKEVPS 105 Query: 59 ----NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKR 95 EI + QL Y + A Y +R + E + Sbjct: 106 SVIGEEIMRRL-RQLDEVAYVRFASVYRSFRDIAEFMDELK 145 >UniRef50_C4V4U4 Putative uncharacterized protein n=2 Tax=Selenomonas RepID=C4V4U4_9FIRM Length = 94 Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Query: 672 RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 + RR+ GYL R +N KQ E RVKH Sbjct: 59 KFERIRRITGYLVGTTDR-WNNAKQAEEHERVKH 91 >UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Aquifex aeolicus RepID=RIR1_AQUAE Length = 801 Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 53/161 (32%), Gaps = 24/161 (14%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 MT +V+KR G K +I+ AI A + VD + Q+Q R+ + E Sbjct: 1 MTMYVIKRSGRKEKLDINKIRIAIKFACEGLNVDPLEL------EADAQIQFRDGITTKE 54 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHD--RDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 IQ + A R D R L +++ L + L Sbjct: 55 IQQLLIKT--------AAEKVSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDL---- 102 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDI 159 K P R V K Y + + +++ + D Sbjct: 103 ---GKYKPYNRKNFYSFV-KEYVEKGIYGEYLLENYSEEDF 139 >UniRef50_B8HVN1 Transcriptional repressor nrdR n=16 Tax=Bacteria RepID=NRDR_CYAP4 Length = 184 Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 6/101 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDI 58 + V+KRDG + PF ++ I+ A + + + + ++Q R +V Sbjct: 47 VPITVIKRDGQREPFDRSKLLRGIVTAFGKNGIAN-IRVEALVDEIEAELQQRALREVTS 105 Query: 59 NEIQTAVEN---QLMSGPYKQLARAYIEYRHDRDIEREKRG 96 EI AV +L Y + A Y +++ RD E Sbjct: 106 AEIGEAVLQNLKELSEVAYVRFASVYRQFQSIRDFVDELNT 146 >UniRef50_Q0SSR4 Putative uncharacterized protein n=10 Tax=Clostridium RepID=Q0SSR4_CLOPS Length = 89 Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQM----QGRNQVDI 58 +++K+DG FK E++ ++ AA + +A V E + + + Sbjct: 2 NIIKKDGRIEEFKIEKLSTSLSNAASDLNFTLNKSDINIIAKDVEETLKKIRKDNGETSS 61 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRH 86 E+ V + L + + + RAY++YR Sbjct: 62 YEVIGVVIDTLKNEKFSDVLRAYVKYRK 89 >UniRef50_C2BEU7 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BEU7_9FIRM Length = 134 Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQM---QGRNQVDI 58 +V+K++G F ++++ +I AA A + ++ A + V++++ + Sbjct: 44 EYVVKKNGNLEKFNADKLSRSIKNAADMAGMQLNSSDIAIILKDVADKLFHGDKKRLTRT 103 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRD 89 NE++ V + L + + ++ AY Y ++ Sbjct: 104 NEVRNIVIDTLANEGFSKIRDAYEAYAQSQN 134 >UniRef50_C8WNX8 Putative uncharacterized protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WNX8_EGGLE Length = 129 Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 1/36 (2%) Query: 670 ASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 RR+ GYL R +N K E RVKH Sbjct: 80 PVPFDRIRRITGYLVGTMDR-WNDAKTSEESDRVKH 114 >UniRef50_A7HM70 Transcriptional repressor nrdR n=20 Tax=Bacteria RepID=NRDR_FERNB Length = 153 Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI--N 59 V+K+DG + F ++I +L+A + + D + + Q+Q +++ Sbjct: 48 PITVIKKDGRREKFDRKKILNGLLKAFEKRPITVDDM-ERIVDNIVSQLQKSGTLEVPSE 106 Query: 60 EIQTAVENQLM---SGPYKQLARAYIEYRH 86 I V +L Y + A Y ++R Sbjct: 107 LIGKLVMEELRKVDQVAYVRFASVYKDFRE 136 >UniRef50_Q9X7J8 Anaerobic ribonucleotide reductase (Fragment) n=1 Tax=Pseudomonas stutzeri RepID=Q9X7J8_PSEST Length = 63 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVV 46 V KRDG F+ ++I+ AI+ A A +A +A V Sbjct: 19 VRKRDGRLAAFEVDKIERAIVAAGAATGEFEAPVAQPLAEAV 60 >UniRef50_B2KDZ3 Putative uncharacterized protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDZ3_ELUMP Length = 62 Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Query: 671 SRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 S+ V RVCGYL +N GK+EE R Sbjct: 26 SKCEVYSRVCGYLRPTS--NWNDGKREEFGMR 55 >UniRef50_B1XJ17 Transcriptional repressor nrdR n=8 Tax=Bacteria RepID=NRDR_SYNP2 Length = 181 Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 3/93 (3%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDI 58 + V+KR+G F +I ++RA + V +A + Q+Q + + Sbjct: 47 VPISVIKRNGQSEAFDRSKILRGMVRACEKTTVL-PSTLEAIAEEIEAQLQQKPKRSITT 105 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIE 91 +I V ++L R YR + ++ Sbjct: 106 AQIGDLVLHRLRQESEVAYVRFASVYRQFQGVD 138 >UniRef50_C7NVI2 ATP-cone domain protein n=3 Tax=Halobacteriaceae RepID=C7NVI2_HALUD Length = 160 Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 38/104 (36%), Gaps = 4/104 (3%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATV-AAVVSEQMQGRNQVDINEIQ 62 V KRDG PF E+++ I RA + VD+ A V A + + V +I Sbjct: 50 QVKKRDGAIEPFDREKLRAGIERAVEKRPVDEQAVTAIVDAIHDALTEREGRIVTTTQIG 109 Query: 63 TAVENQLMSGP---YKQLARAYIEYRHDRDIEREKRGRLNQEIR 103 V L Y + Y + + RE L+ E Sbjct: 110 DLVSEHLRERDQVAYLRFVSVYEAFADPEEFRRELDAVLDAETD 153 >UniRef50_A8RAD8 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A8RAD8_9FIRM Length = 94 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Query: 670 ASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 RR+ GYL R FN GK+ E + RVKH Sbjct: 59 PEGFEKIRRITGYLVGTVDR-FNNGKRAEERDRVKH 93 >UniRef50_C3X5R9 Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Proteobacteria RepID=C3X5R9_OXAFO Length = 60 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 2/40 (5%) Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 R V RV GY FN GKQ E + RV + Sbjct: 8 QEKRQRCEVWTRVMGYHRPVSE--FNPGKQSEHRDRVHFV 45 >UniRef50_Q04J60 Transcriptional repressor nrdR n=27 Tax=Streptococcus RepID=NRDR_STRP2 Length = 157 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 6/92 (6%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI--NEIQ 62 V+K+DG + F ++I I+R+A+ V +D V + ++++GRN+ +I +I Sbjct: 51 VVKKDGTREQFSRDKIFNGIIRSAQKRPVS-SDEINMVVNRIEQKLRGRNENEIQSEDIG 109 Query: 63 TAVENQLMSG---PYKQLARAYIEYRHDRDIE 91 + V +L Y + A Y ++ ++E Sbjct: 110 SLVMEELAELDEITYVRFASVYRSFKDVSELE 141 >UniRef50_C3XBZ1 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Proteobacteria RepID=C3XBZ1_OXAFO Length = 65 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 2/38 (5%) Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVK 704 R V RV GY FN GKQ E RV Sbjct: 13 QEKRQRCEVWTRVMGYHRPVSE--FNPGKQSEHHDRVH 48 >UniRef50_A7VU12 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU12_9CLOT Length = 91 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%) Query: 669 DASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 + RR+ GYL D +N K E + RVKH Sbjct: 52 EEVPFEHIRRITGYLV-GDMSHWNNAKSAEERDRVKH 87 >UniRef50_Q1AS42 Transcriptional repressor nrdR n=10 Tax=Bacteria RepID=NRDR_RUBXD Length = 156 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 3/90 (3%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDINEIQ 62 V+KRDG + PF E+++ + +A A + + + + +++ R++V I Sbjct: 51 VLKRDGRREPFDREKLRAGLEKAC-AKQRVTGEQIDLIVDQIEAELRERRRHEVTSRRIG 109 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIER 92 V +L R YR D+++ Sbjct: 110 DMVLARLRRLDMVAYLRFASVYRQYTDVDQ 139 >UniRef50_B1YDP3 ATP-cone domain protein n=16 Tax=Archaea RepID=B1YDP3_THENV Length = 91 Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 V+KRDG F E+I ++L+A +V +A V + R V E+ Sbjct: 3 KVVKRDGRTEEFIPEKIVVSVLKAGAPVDV-----ARKIARKVECAVMERENVTAQELTR 57 Query: 64 AVENQL 69 + +L Sbjct: 58 MILAEL 63 >UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Bacteria RepID=B0RGP9_CLAMS Length = 834 Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 M+ V+KRDG K P+ + RI AI A + + ++ + +A+ + + + + Sbjct: 1 MSITVVKRDGSKEPYDANRINLAIEDATQGLD-ENIGWVTQIASELEITLFDG--ITTQQ 57 Query: 61 IQTAVENQLMSG 72 + AV + Sbjct: 58 LDEAVIQVALQN 69 >UniRef50_C0QQA0 Transcriptional repressor nrdR n=4 Tax=Hydrogenothermaceae RepID=NRDR_PERMH Length = 152 Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDIN--EIQ 62 V K++G PF ++I I A+K V + +A + + + ++ + EI Sbjct: 51 VKKKNGTTEPFNKDKIIRGIRLASKNRPVSEKQMV-EIADEIEKYLLEEGKLVVESTEIG 109 Query: 63 TAVENQL 69 V+ +L Sbjct: 110 DLVQEKL 116 >UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URA6_9AQUI Length = 767 Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 6/64 (9%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+KR G + +I+ A+ A K VD + Q+Q R+ + EIQ Sbjct: 3 VVKRSGKREQLDINKIRIALEFAFKGLNVDPLEL------ETDAQIQFRDGITTEEIQAV 56 Query: 65 VENQ 68 + Sbjct: 57 LIRT 60 >UniRef50_B0PGE0 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B0PGE0_9FIRM Length = 86 Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 673 VSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQI 711 RR+ GYL R FN K+ EV RVKH + ++ Sbjct: 47 FERIRRITGYLVGTLDR-FNDAKRAEVGERVKHTVSREV 84 >UniRef50_D1AIQ0 Putative uncharacterized protein n=4 Tax=Bacteria RepID=D1AIQ0_SEBTE Length = 495 Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 75/512 (14%), Positives = 151/512 (29%), Gaps = 113/512 (22%) Query: 167 SPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTIN 226 +PF P + ++ D + + G K IEP K I AT + V S + Sbjct: 55 APFRPRY--IVPDYEKFMKNGSKF--LGIEPAKDIWEATHNLLMLYKHVPSITTMPVYLG 110 Query: 227 RIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANG 286 +D +L P++ +E Y A + + Sbjct: 111 NLDYMLEPYIK-------------------------DEEEAYRAIKLFLKHI-------- 137 Query: 287 QTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPN 346 T + ILR + + P L + + D Sbjct: 138 DTTITDSFCHSNIGPKETKAAFIILRVM-----EELQLPT-PNLTLKYSE----ETSDKL 187 Query: 347 YDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNL 406 A +K + + Y + K G + NG ++ G Sbjct: 188 ALAAVEAALVTAKPSFANHKVYSENFK--GDYGIVSC----------YNGLKVGGG---- 231 Query: 407 GVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC 466 +L ++ +K ++ + +DE L A++ I P + Sbjct: 232 -AYTLVRVKLGELSKKADSV-EQFMDEVLPDLADAMLGYIDERVRFIVEETPF-FESNFL 288 Query: 467 GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYD----NEQLRAKGIAIVE 522 + + + + G +G+ E +N L E+ + +++ G+ IV+ Sbjct: 289 AK--------EGLIERDKFTGLFGVVGLAECVNNLLKAENQEERFGYSDKANQLGMQIVQ 340 Query: 523 RLRQAVDQWKEET-----GYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSF 577 +L + V K + G L A+ G+ +D Sbjct: 341 KLDEKVKGHKNKYCPFTDGNH-----------------LLHAQVGIDTDTSDSP----GC 379 Query: 578 HLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQH--NLKALEDVWDYSY--QHVP 633 + V ++ +D + AP+ G I + + N +A+ D+ ++ + Sbjct: 380 RIPVGEEPEIWDHLTQSAPFHKYFPSG-IGDIFTFDDTYKKNPQAILDIIRGAFNSTDLR 438 Query: 634 YYG-TNTPIDECYECGF---TGEFECTSKGFT 661 + ++ D G+ E KG Sbjct: 439 FISVYSSDSDVVRVTGYLVKKSEIAKLEKGEA 470 >UniRef50_A1RYY0 ATP-cone domain protein n=2 Tax=Thermoproteales RepID=A1RYY0_THEPD Length = 187 Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 7/69 (10%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 M V+KR G F E++ +++ A + +A V ++ R+ +E Sbjct: 1 MPKKVVKRSGKVEEFDREKLVRSMVNA-----GAPEEVAVEIAKEVESKV--RDGATTDE 53 Query: 61 IQTAVENQL 69 I+ V +L Sbjct: 54 IRRYVLARL 62 >UniRef50_B1C8M2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8M2_9FIRM Length = 112 Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 672 RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQI 711 RR+ GYL R FN K+ E + RVKH N + Sbjct: 71 PFDRIRRITGYLVGTLDR-FNDAKRSEEQDRVKHSLNSDM 109 >UniRef50_C8PRU3 Putative anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRU3_9SPIO Length = 170 Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 N + V R+ GY S R +N GK+EE R Sbjct: 20 NVHGTTTEVYARIVGYYRSV--RNWNKGKREEFSER 53 >UniRef50_C7RBJ3 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBJ3_KANKD Length = 81 Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 N D + V RV GY A FN GKQ E K R Sbjct: 41 NQDRQKCEVWTRVMGYHRPVSA--FNKGKQSEHKER 74 >UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyrobaculum RepID=A3MX47_PYRCJ Length = 853 Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 4/86 (4%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+K +G PF+ E+++ +I RAA+ A V+ + + V + ++ A Sbjct: 4 VLKLNGSVEPFQPEKLRRSIERAAQDAGVEVDGAADIKVERDVGSWELADLVHVELLKKA 63 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDI 90 +E ++A++++ R ++I Sbjct: 64 IER----PELAEVAKSHLLGRIYKEI 85 >UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCH3_CALMQ Length = 877 Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 12/86 (13%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 V+KR+G + F ++ ++ A A + V+ Q++G+ +V +EI Sbjct: 13 TVIKRNGLREEFNPVKLLNSLKLAG-------APNPERILEEVTSQIKGKGEVTSSEISD 65 Query: 64 AVE---NQLMSGPYK--QLARAYIEY 84 +V+ L+S +K AR Y+ + Sbjct: 66 SVQLMMLNLISEDFKWHDAARNYLLF 91 >UniRef50_A3HUR9 Molybdopterin biosynthesis protein MoeB n=1 Tax=Algoriphagus sp. PR1 RepID=A3HUR9_9SPHI Length = 356 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 35/214 (16%) Query: 418 LEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYM-----EGACGV-RLN 471 + + ++ D + A L R + A P +Y +G V Sbjct: 114 YLSSKNSEKIFQGFDLIID-ATDNLFIRYVINDTCLALGIPFVYGSIHQFQGQVSVFNYQ 172 Query: 472 ADDDVSEIFKNGRASI-----------SLGYIGI---HETINALFGGEHVYDNEQLRAKG 517 +IF + ++ ++G IG+ +E I + + D + Sbjct: 173 GGPSYRDIFPDENQTVPNCAEAGVLGTTVGLIGMLQANEAIKIIL---EIGDVLSGKLLI 229 Query: 518 IAIVERLRQAVDQW----KEETGYGFSLYST--PSENLCDRFCRLDTAEFGVVPGVTDKG 571 ++ Q V ++ K+E + + + P E L LD E G VP + Sbjct: 230 YDMLSH-SQQVFEFGNAPKKEKKENSNSFESLNPEEALVGDAILLDVREKGEVPVIE--- 285 Query: 572 YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGF 605 + NS + + + +K+D EA G Sbjct: 286 -FANSISMPLSLMESESNKLDKEAEIRIFCQSGA 318 >UniRef50_C9R8L5 ATP-cone domain protein n=12 Tax=Bacteria RepID=C9R8L5_AMMDK Length = 163 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 12/101 (11%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 + V+K+DG + F +I LRA V D + V +++ R + E Sbjct: 47 LPLVVIKKDGRRELFDRAKILGGCLRACHKRPVRREDL-ENLVDEVERELRNRLEP---E 102 Query: 61 IQTAVENQLMSGPYKQL--------ARAYIEYRHDRDIERE 93 I + V +L+ K+L A Y E+R D + E Sbjct: 103 IPSYVIGELVMEKLKRLDEVAYVRFASVYREFRDSYDFKEE 143 >UniRef50_B0MS77 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MS77_9FIRM Length = 100 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 672 RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQI 711 RR+ GYL R FN K+ EV+ RVKH + Sbjct: 54 PFDRIRRITGYLVGTLDR-FNNAKKAEVEDRVKHSIAPDV 92 >UniRef50_A4J7P4 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7P4_DESRM Length = 86 Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Query: 671 SRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 S + RR+ GYL + D FN KQEE+ RV H Sbjct: 53 SDIRRVRRITGYLSTVDR--FNDAKQEELGDRVVH 85 >UniRef50_UPI0001698138 transcriptional regulator NrdR n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698138 Length = 122 Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 5/79 (6%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 P V+K+DG +VPF ++++ + RA + V A+ + ++ ++ + + +I +Q Sbjct: 37 PQVVKQDGSRVPFDEDKLRAGMERALEKRPVS-AERVDAAISHITRKLTTKGEREIPSLQ 95 Query: 63 --TAVENQLMSGPYKQLAR 79 V ++L Q+A Sbjct: 96 IGDLVMDEL--KRLDQVAY 112 >UniRef50_A1HR65 Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HR65_9FIRM Length = 106 Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Query: 669 DASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 + S + RR+ GYL + D FN K+ E+ RV H Sbjct: 60 ERSPIRRVRRITGYLSTVDR--FNDAKRAELADRVAH 94 >UniRef50_Q3IM07 Transcriptional repressor nrdR n=3 Tax=Halobacteriaceae RepID=NRDR_NATPD Length = 162 Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 5/82 (6%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 V KRDG F ++++ I RA + V + + + ++Q R + + Sbjct: 50 QVKKRDGTIESFDQQKLRTGIERAVEKRGVAE-TTVTALVDDIESELQDREA---RIVSS 105 Query: 64 AVENQLMSGPYKQLAR-AYIEY 84 ++ +L+S + L + AYI + Sbjct: 106 SLIGELVSENLRTLDKVAYIRF 127 >UniRef50_Q6MNX8 Transcriptional repressor nrdR n=6 Tax=Bacteria RepID=NRDR_BDEBA Length = 194 Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ-----GRNQV 56 P ++K+DG + PF E+I L+ +A+ A + AVV + G +++ Sbjct: 47 FPFIIKKDGRREPFSKEKI----LKGLQASCQKRPVSLAQIDAVVEKISAWVINRGESEI 102 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASL 113 I V +L R YR +D++ + E+ V+ +N L Sbjct: 103 SSRLIGKKVMAELKQLDDVAYIRFASVYRTFKDVQEFVETLEDAELLDFVDASNPQL 159 >UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alpha n=54 Tax=Epsilonproteobacteria RepID=RIR1_HELPJ Length = 788 Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 65/222 (29%), Gaps = 52/222 (23%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 V+KR+G P +I++ A E + V ++Q R+++ EIQ Sbjct: 3 TVVKRNGRIEPLDITKIQKYTKDATDNLEG-----VSQSELEVDARLQFRDKITTEEIQQ 57 Query: 64 AVENQLMSGPYKQ------LARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 + + +A Y L ++ G + EN Sbjct: 58 TLIKTAVDKIDIDTPNWSFVASRLFLY------------DLYHKVSGFTGYRHLKEYFEN 105 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 A + +++ ++ + + P Q +Y +++ Sbjct: 106 AEEKGRILKGFKEKFDLE----FLNSQIKPERDFQF-----------NYLGIKTLYD--- 147 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHI 219 + +L N IE P+ + + + + Sbjct: 148 ---RYLLKD---ANNHPIELPQHM-----FMSIAMFLAQNEQ 178 >UniRef50_C7GZN2 Putative anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZN2_9FIRM Length = 102 Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%) Query: 672 RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGN 708 RR+ GYL +N K E K RVKH N Sbjct: 56 PFERIRRITGYLV-GTMDNWNNAKTNEEKDRVKHAMN 91 >UniRef50_Q086C8 Transcriptional repressor nrdR n=50 Tax=Gammaproteobacteria RepID=NRDR_SHEFN Length = 149 Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRA--AKAAEVDDADYCATVAAVVSEQMQGRNQVDI 58 + P V+KRDG + PF E+++ +LRA + +D+ + T + + G +V+ Sbjct: 47 VMPRVIKRDGTRQPFDEEKLRGGMLRAVEKRPVSIDEIEQALTKIKS-TLRATGEREVNS 105 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRD 89 I + QLMS R YR D Sbjct: 106 EMIGNLMMEQLMSLDKVAYIRFASVYRAFED 136 >UniRef50_C8SAI5 Restriction endonuclease n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SAI5_FERPL Length = 261 Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 7/75 (9%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V K+DG F ++ + LR+ E+ V V E++ + +EI Sbjct: 4 VRKKDGRLEEFDRTKVLKTCLRSGANVEI-----AEKVLRDVEERLYDG--ITTDEILEI 56 Query: 65 VENQLMSGPYKQLAR 79 V L+ Y++ A Sbjct: 57 VIESLLKHGYEKAAT 71 >UniRef50_A1HMR9 Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMR9_9FIRM Length = 93 Score = 45.0 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Query: 669 DASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 + S + RR+ GYL S + FN K+ E + RV H Sbjct: 58 EKSPIRRVRRITGYLSSLE--NFNDAKRAECEARVTH 92 >UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Brachyspira RepID=C0QY27_BRAHW Length = 773 Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 46/106 (43%), Gaps = 12/106 (11%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 ++KRDG + PF E++++ I A + E + ++ +++ I Sbjct: 12 IIKRDGREEPFNEEKLRKVIDWATEGKEAFTNQLLEGLNIKIN------DKMKIE----V 61 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTN 110 + ++L++ ++ Y Y D E+ ++ +E GL + + Sbjct: 62 LYDELINTAVNMISPLYPMY--DTIAEKLYLMKIYKETCGLKKIGS 105 >UniRef50_Q73LK7 Putative uncharacterized protein n=1 Tax=Treponema denticola RepID=Q73LK7_TREDE Length = 95 Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 N + V R+ GY S R +N GK+EE R Sbjct: 20 NVHGTGTEVYARIVGYYRSV--RNWNKGKREEYNHR 53 >UniRef50_B0RZP1 Putative uncharacterized protein n=2 Tax=Finegoldia magna RepID=B0RZP1_FINM2 Length = 127 Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQ--GRNQVDINEI 61 V+K+ G F E+I +I + + ++ +A + V ++M+ RN EI Sbjct: 45 VLKKLGSVESFDKEKIFHSIAQTSDSSGAKMNASDVNIIVEDVLKKMKSIKRNVYPTTEI 104 Query: 62 QTAVENQLMSGPYKQLARAY 81 + VE L Y ++ AY Sbjct: 105 RGYVEEALKEEGYGKVLEAY 124 >UniRef50_A7I8W2 Transposase, IS605 OrfB family n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I8W2_METB6 Length = 251 Score = 44.6 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 14/95 (14%) Query: 581 VEKKVNPYDKIDFEAPYPPLAN-----GGFICYGEYPNIQHNLKALEDVWDYSYQH--VP 633 V + I FE + + GGF E+ + +L+ + + + +P Sbjct: 89 VSFAESLGTGIKFEKLFSSRYSHSHDAGGF---VEFSFANGSFFSLQRLVEKMAERKGIP 145 Query: 634 YYGTNTPID--ECYECGFTGEFECTSKGFTCPKCG 666 N C CG G + K F CP CG Sbjct: 146 VIYVNPAYTSKRCSRCGSMG--RRSRKRFECPHCG 178 >UniRef50_Q03RK0 Transcriptional repressor nrdR n=49 Tax=Firmicutes RepID=NRDR_LACBA Length = 166 Score = 44.6 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 41/92 (44%), Gaps = 11/92 (11%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR-NQVDINEIQT 63 V+K++G + F E++ I+R+A + V + ++++ + + ++EI + Sbjct: 51 VIKKNGTREEFNREKVLRGIIRSA-----EKRPVGMDVMTQIVDEVENKIRALGVSEISS 105 Query: 64 AVENQLMSGPYKQLAR-AYIE----YRHDRDI 90 + + + + AYI YR +D Sbjct: 106 QLIGEYVMNRLVDVDEIAYIRFASVYRQFKDT 137 >UniRef50_C2D6G3 NrdR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6G3_9ACTN Length = 104 Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 6/105 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDI 58 M V+K+DG K PF E+++ ++ A D + + + ++ G+ ++ Sbjct: 1 MPILVIKKDGTKEPFSHEKLRRGLVAAT-IKRSIDLNRINQLIDSIETELRDNGKTEITS 59 Query: 59 NEIQTAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 EI V +L+ Y + A Y +++ + E R N+ Sbjct: 60 QEIGMRVLQKLIDIDKVAYVRFASVYRDFKDVEEFSEELRSLSNE 104 >UniRef50_A7HX83 Transcriptional repressor nrdR n=85 Tax=Bacteria RepID=NRDR_PARL1 Length = 162 Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 44/97 (45%), Gaps = 12/97 (12%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 ++K +G +VPF +++ ++ A + V+ + + + + +++ + +EI + Sbjct: 50 TIIKTNGRRVPFDRDKLMRSVQIAMRKRPVEQ-ERIERMVSGIVRRLES---MGESEIPS 105 Query: 64 AVENQLMSGP--------YKQLARAYIEYRHDRDIER 92 A+ +L+ Y + A Y +R +D E Sbjct: 106 AMIGKLVMEGLSSLDAVAYVRFASVYRNFREAKDFEE 142 >UniRef50_A6LMS2 Transcriptional repressor nrdR n=3 Tax=Bacteria RepID=NRDR_THEM4 Length = 151 Score = 43.5 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 6/90 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI--N 59 V+K+DG + F +I +++A + V + + V +Q ++I Sbjct: 48 PVFVVKKDGKREKFDRAKILNGVMKACEKTNVTLEE-IEKLVDDVVNDVQKSGNLEILTL 106 Query: 60 EIQTAVENQLMSGP---YKQLARAYIEYRH 86 EI V +L Y + A Y ++R Sbjct: 107 EIGKLVMEKLKKLNGVAYVRFASVYKDFRE 136 >UniRef50_C5CHN3 Transcriptional repressor nrdR n=16 Tax=Bacteria RepID=NRDR_KOSOT Length = 158 Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 45/107 (42%), Gaps = 9/107 (8%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDIN 59 V+K+ G + F ++ IL+A + V + +++ + +++ G+ ++ Sbjct: 48 PIFVVKKGGQRERFDRNKVLNGILKACEKRPVSIEE-IENMSSEIEQEVLRSGKAEISSK 106 Query: 60 EIQTAVENQLMSG------PYKQLARAYIEYRHDRDIEREKRGRLNQ 100 EI V +L + + + + + H DI RE + L + Sbjct: 107 EIGEMVMEKLKRKDRVAYVRFASVYKEFRDLDHFMDIIRELKDELKK 153 >UniRef50_Q73N26 Transcriptional repressor nrdR n=2 Tax=Bacteria RepID=NRDR_TREDE Length = 151 Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+K+DG + PF +++++ I RA + V + + + +Q + ++ EI+T Sbjct: 51 VIKKDGRREPFDRKKLEKGIERALEKRPVS-LNSIENIVTEIEDQAVLNSGLN-KEIETT 108 Query: 65 VENQLMSGPYKQLAR-AYIEY 84 V +++ + + AYI + Sbjct: 109 VLGEMVLSHLYSIDKVAYIRF 129 >UniRef50_C1SKV8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C1SKV8_9BACT Length = 56 Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 2/32 (6%) Query: 671 SRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 V RV GY +N GK+EE R Sbjct: 20 EECEVYSRVVGYHSPTS--HWNKGKKEEFVHR 49 >UniRef50_B1WNA0 Transcriptional repressor nrdR n=10 Tax=Bacteria RepID=NRDR_CYAA5 Length = 187 Score = 42.3 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 6/121 (4%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDI 58 + V+K DG K F + ++ ++RA + + T+ + +Q R +V Sbjct: 47 VPITVIKHDGKKESFDASKLLRGMVRACEKTGIS-HQRLETIVDDIEAYLQQRPQREVTT 105 Query: 59 NEIQTAVENQLMSGP---YKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLN 115 +EI V L Y + A Y ++ +D + I + Q + S Sbjct: 106 HEIGQLVLKYLREENEVAYIRFASVYGRFKGIKDFVETLDQLQEETISSPMSQWSKSSTR 165 Query: 116 E 116 + Sbjct: 166 D 166 >UniRef50_C7GYP4 Transcriptional regulator NrdR n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYP4_9FIRM Length = 156 Score = 42.3 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDIN-- 59 V+K DG + F E+I+++I A + ++ D + + ++ + +I Sbjct: 48 IVKVIKNDGRREDFSQEKIRKSINIACQKRKISQ-DTIEGIIKSIERTIENLDNKEIESK 106 Query: 60 EIQTAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRGRLNQE 101 I V L Y + A Y+++ +E + + Sbjct: 107 AIGGLVMEALKKIDPVAYVRFASVYMDFTEPEGFIKEASKFIEDD 151 >UniRef50_Q1JDF4 Transcriptional repressor nrdR n=213 Tax=Bacteria RepID=NRDR_STRPB Length = 164 Score = 42.3 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 53/120 (44%), Gaps = 7/120 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDI 58 + V+K+DG + F ++I ++++A+ V D V + + ++++ N+V Sbjct: 47 LPLLVIKKDGTREQFSRDKILNGVVQSAQKRPVSSTD-IENVISRIEQEVRTTYENEVSS 105 Query: 59 NEIQTAVENQLMSG---PYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLN 115 I V ++L Y + A Y ++ D D E ++ +RG ++ N N Sbjct: 106 TAIGNLVMDELAELDEITYVRFASVYKSFK-DVDEIEELLQQITNRVRGKKKRLNNDETN 164 >UniRef50_A0Q128 Transcriptional repressor nrdR n=21 Tax=Clostridiales RepID=NRDR_CLONN Length = 158 Score = 42.3 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDINEIQ 62 V+KRD + F +I +++A + + ++A + ++M +V I Sbjct: 51 VIKRDSNREYFDKTKIINGLVKACQKRPIS-RVQIDSIADEIEKKMNNDMLTEVKSEYIG 109 Query: 63 TAVENQLM---SGPYKQLARAYIEYRHDRDIEREKRGRL-NQEIRGLVE 107 + +L Y + A Y +++ E + ++ I + + Sbjct: 110 ELIMEKLKEIDEVSYVRFASVYRQFKDINTFIEEITNLMSDKHIGKIKK 158 >UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hydrogenothermaceae RepID=C1DWR9_SULAA Length = 1222 Score = 41.9 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 7/113 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEV-DDADYCATVAAVVSEQMQGRNQVDIN 59 M V+KRDG F+ +++ +AI + E+ DD + VA + ++ + V Sbjct: 1 MQRIVVKRDGSVEKFQMKKLVDAIFALLEGLELPDDYEIVFKVAKELDLKIPEK--VTTE 58 Query: 60 EIQTAV----ENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQ 108 E+ V E+ + + + I VE+ Sbjct: 59 ELDYLVLKAIEHLIPKNYIYDTLATRQLLKIINRRIDRRFNSFKDYINYAVEE 111 >UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPP8_9BACL Length = 574 Score = 41.9 bits (97), Expect = 0.081, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 21/173 (12%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDAD-YCATVAAVVSEQMQGRNQVDINEIQ 62 V KRDG P ++I + R +AAE D + A V + + M+ + IQ Sbjct: 40 TVEKRDGRIEPLSLDKIFAFLRRGCEAAEGCDPERLAADVWPQLRDGMRTSEIARV-AIQ 98 Query: 63 TAVENQLMSGPYKQ-------LARAYIEYRHDRDIEREKRGRLNQEIRGLVEQT------ 109 AVE ++ P Q L AY + +R G Q I L Sbjct: 99 AAVEKTSVAEPGWQFVAARLLLLDAYKQASRNRGYRHLGYGDFYQLIVELERIGRYGTYI 158 Query: 110 -NASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHY 161 +E A + + P + LL + + LL R ++ + G + Sbjct: 159 REHYSEDEIAELAAYIKPERDHLL-----NYVGLKQLLDRYAIRNLDNGIMEL 206 >UniRef50_O26580 Putative uncharacterized protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26580_METTH Length = 90 Score = 41.9 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAE---VDDADYCATVAAVVSEQMQGRNQVDINE 60 +V+KR G + P++ +I+ ++ +AA A + + V V ++++ ++ + Sbjct: 2 NVIKRRGFREPYEPSKIRASLEKAAIDAGYSPEEKREIIERVYETVKKKIEVEEEIKSDT 61 Query: 61 IQTAVENQLMSGPYKQLARAYIEY 84 I+ + +L +A+++ + Sbjct: 62 IRACLLTEL-DRCEPYIAKSWRRF 84 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9L646 Anaerobic ribonucleoside-triphosphate reductase ... 857 0.0 UniRef50_P43752 Anaerobic ribonucleoside-triphosphate reductase ... 798 0.0 UniRef50_D1BHZ8 Ribonucleoside-triphosphate reductase class III ... 771 0.0 UniRef50_Q032I4 Ribonucleoside-triphosphate reductase / ribonucl... 761 0.0 UniRef50_UPI0001BC56DE anaerobic ribonucleoside triphosphate red... 718 0.0 UniRef50_D2RBY9 Anaerobic ribonucleoside-triphosphate reductase ... 718 0.0 UniRef50_C3WCA1 Anaerobic ribonucleoside-triphosphate reductase ... 718 0.0 UniRef50_Q7P4N7 Anaerobic ribonucleoside-triphosphate reductase ... 714 0.0 UniRef50_B8DWG9 Anaerobic ribonucleoside-triphosphate reductase ... 713 0.0 UniRef50_D1BVJ9 Anaerobic ribonucleoside-triphosphate reductase ... 698 0.0 UniRef50_A4J2C9 Ribonucleoside-triphosphate reductase class III ... 680 0.0 UniRef50_B3RGP7 Anaerobic ribonucleoside-triphosphate reductase ... 673 0.0 UniRef50_C2BIL8 Possible ribonucleoside-triphosphate reductase n... 663 0.0 UniRef50_B1BE54 Anaerobic ribonucleoside-triphosphate reductase ... 663 0.0 UniRef50_C8NQX8 Anaerobic ribonucleoside-triphosphate reductase ... 662 0.0 UniRef50_B2A3V1 Anaerobic ribonucleoside-triphosphate reductase ... 659 0.0 UniRef50_A9KQ95 Anaerobic ribonucleoside-triphosphate reductase ... 648 0.0 UniRef50_C7MM33 Anaerobic ribonucleoside-triphosphate reductase ... 647 0.0 UniRef50_D0WIV3 Anaerobic ribonucleoside-triphosphate reductase ... 644 0.0 UniRef50_A6L0X1 Anaerobic ribonucleoside-triphosphate reductase ... 640 0.0 UniRef50_C4ZF10 Anaerobic ribonucleoside-triphosphate reductase ... 635 e-180 UniRef50_A6LHE5 Anaerobic ribonucleoside-triphosphate reductase ... 632 e-179 UniRef50_B2RKM0 Anaerobic ribonucleoside-triphosphate reductase ... 618 e-175 UniRef50_C8P1M7 Anaerobic ribonucleoside-triphosphate reductase ... 605 e-171 UniRef50_B3EQU4 Anaerobic ribonucleoside-triphosphate reductase ... 602 e-170 UniRef50_A5HXZ1 Anaerobic ribonucleoside-triphosphate reductase ... 601 e-170 UniRef50_C7N7G2 Anaerobic ribonucleoside-triphosphate reductase ... 600 e-170 UniRef50_A6TN19 Anaerobic ribonucleoside-triphosphate reductase ... 597 e-169 UniRef50_Q733N6 Anaerobic ribonucleoside-triphosphate reductase,... 588 e-166 UniRef50_B8DLP5 Anaerobic ribonucleoside-triphosphate reductase ... 588 e-166 UniRef50_C6JR80 Ribonucleoside-triphosphate reductase n=2 Tax=Fu... 586 e-165 UniRef50_Q6QGI8 Putative anaerobic ribonucleoside-triphosphate r... 578 e-163 UniRef50_A9KI88 Anaerobic ribonucleoside-triphosphate reductase ... 572 e-161 UniRef50_B1YME3 Anaerobic ribonucleoside-triphosphate reductase ... 570 e-161 UniRef50_C6BJE1 Anaerobic ribonucleoside-triphosphate reductase ... 570 e-160 UniRef50_B3QGB6 Anaerobic ribonucleoside-triphosphate reductase ... 567 e-160 UniRef50_C6IYT0 Anaerobic ribonucleoside-triphosphate reductase ... 552 e-155 UniRef50_Q0W698 Anaerobic ribonucleoside-triphosphate reductase ... 549 e-154 UniRef50_A5UN10 Anaerobic ribonucleoside-triphosphate reductase,... 540 e-152 UniRef50_UPI0001C41C69 anaerobic ribonucleoside-triphosphate red... 538 e-151 UniRef50_A4FZY4 Anaerobic ribonucleoside-triphosphate reductase ... 535 e-150 UniRef50_D1Z2H8 Anaerobic ribonucleoside-triphosphate reductase ... 533 e-150 UniRef50_B8G1P5 Anaerobic ribonucleoside-triphosphate reductase ... 520 e-145 UniRef50_A8F4B5 Anaerobic ribonucleoside-triphosphate reductase ... 517 e-145 UniRef50_B3E035 Ribonucleotide reductase of class III (Anaerobic... 514 e-144 UniRef50_C5H7Q4 Anaerobic nucleoside diphosphate reductase n=3 T... 505 e-141 UniRef50_C7NCJ9 Anaerobic ribonucleoside-triphosphate reductase ... 496 e-138 UniRef50_D1B9B6 Anaerobic ribonucleoside-triphosphate reductase ... 484 e-135 UniRef50_C3RPW0 Anaerobic ribonucleoside-triphosphate reductase ... 477 e-133 UniRef50_C7ZMN2 Predicted protein n=1 Tax=Nectria haematococca m... 476 e-132 UniRef50_A7I0I1 Anaerobic ribonucleoside-triphosphate reductase ... 472 e-131 UniRef50_Q12U66 Anaerobic ribonucleoside-triphosphate reductase ... 463 e-128 UniRef50_B7C7M8 Putative uncharacterized protein n=1 Tax=Eubacte... 462 e-128 UniRef50_Q12U78 Anaerobic ribonucleoside-triphosphate reductase ... 448 e-124 UniRef50_Q0TSL9 Anaerobic ribonucleoside-triphosphate reductase ... 445 e-123 UniRef50_Q8TWY0 Oxygen-sensitive ribonucleoside-triphosphate red... 444 e-123 UniRef50_Q1PZG5 Similar to oxygen sensitive ribonucleoside triph... 437 e-121 UniRef50_C9LGY8 Anaerobic ribonucleoside-triphosphate reductase ... 436 e-120 UniRef50_A1RX14 Anaerobic ribonucleoside-triphosphate reductase ... 435 e-120 UniRef50_C5VLT4 Anaerobic ribonucleoside-triphosphate reductase ... 434 e-120 UniRef50_Q2LUI4 Anaerobic ribonucleoside-triphosphate reductase ... 434 e-120 UniRef50_C8W489 Anaerobic ribonucleoside-triphosphate reductase ... 422 e-116 UniRef50_A6L4X5 Oxygen-sensitive ribonucleoside-triphosphate red... 421 e-116 UniRef50_C5A351 Anaerobic ribonucleoside triphosphate reductase ... 419 e-115 UniRef50_A2BJ51 Ribonucleotide reductase, oxygen sensitive (RNR,... 419 e-115 UniRef50_A8A8G8 Anaerobic ribonucleoside-triphosphate reductase ... 410 e-112 UniRef50_C9RJ61 Anaerobic ribonucleoside-triphosphate reductase ... 407 e-112 UniRef50_B5YJD4 Anaerobic ribonucleoside-triphosphate reductase ... 399 e-109 UniRef50_D1JM33 Anaerobic ribonucleoside-triphosphate reductase ... 399 e-109 UniRef50_D1SNH7 Anaerobic ribonucleoside-triphosphate reductase ... 387 e-106 UniRef50_C8VXW8 Oxygen-sensitive ribonucleoside-triphosphate red... 352 3e-95 UniRef50_A5D0B0 Oxygen-sensitive ribonucleoside-triphosphate red... 348 4e-94 UniRef50_B1L9A6 Anaerobic ribonucleoside-triphosphate reductase ... 321 5e-86 UniRef50_B2V5I1 Anaerobic ribonucleoside-triphosphate reductase ... 297 1e-78 UniRef50_A3MYN5 Anaerobic ribonucleoside triphosphate reductase ... 295 3e-78 UniRef50_B8D5R3 Anaerobic ribonucleoside triphosphate reductase ... 257 1e-66 UniRef50_Q58242 Mja rnr-2 intein n=3 Tax=Methanococcales RepID=Y... 232 3e-59 UniRef50_B3TA58 Putative ATP cone domain protein n=6 Tax=environ... 228 5e-58 UniRef50_A9A646 Regulatory protein ArsR n=4 Tax=Archaea RepID=A9... 227 1e-57 UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=My... 215 4e-54 UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 209 2e-52 UniRef50_D2MLR7 ATP cone domain protein n=1 Tax=Bulleidia extruc... 208 8e-52 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 207 1e-51 UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 204 1e-50 UniRef50_C5VU72 Anaerobic ribonucleoside-triphosphate reductase ... 202 5e-50 UniRef50_A3DFS4 Putative uncharacterized protein n=22 Tax=Clostr... 202 5e-50 UniRef50_Q3ADQ8 Putative uncharacterized protein n=1 Tax=Carboxy... 195 5e-48 UniRef50_B9Y9Q5 Putative uncharacterized protein n=1 Tax=Holdema... 195 6e-48 UniRef50_B0PG79 Putative uncharacterized protein n=2 Tax=Clostri... 191 6e-47 UniRef50_A1SHU8 Putative uncharacterized protein n=1 Tax=Nocardi... 190 2e-46 UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 184 7e-45 UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=... 183 2e-44 UniRef50_Q64EQ7 Oxygen-sensitive ribonucleoside-triphosphate red... 182 3e-44 UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Met... 180 2e-43 UniRef50_UPI0001B41CA5 anaerobic ribonucleoside triphosphate red... 174 8e-42 UniRef50_B9PEY4 Predicted protein (Fragment) n=1 Tax=Populus tri... 172 4e-41 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 158 6e-37 UniRef50_C5EWH7 Putative uncharacterized protein n=2 Tax=Clostri... 158 6e-37 UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=The... 156 2e-36 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 148 6e-34 UniRef50_C2WAD7 Anaerobic ribonucleoside-triphosphate reductase ... 143 3e-32 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 136 2e-30 UniRef50_A5M517 Anaerobic ribonucleoside-triphosphate reductase ... 127 1e-27 UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylc... 120 2e-25 UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=ce... 117 2e-24 UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Acidu... 115 6e-24 UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=ce... 96 7e-18 UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Ch... 92 5e-17 UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=ce... 92 8e-17 UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=ce... 92 8e-17 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 90 3e-16 UniRef50_A4VUA6 Oxygen-sensitive ribonucleoside-triphosphate red... 89 5e-16 UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Ba... 87 2e-15 UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alp... 84 2e-14 UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Su... 80 3e-13 UniRef50_B0KB73 ATP-cone domain protein n=4 Tax=Thermoanaerobact... 80 3e-13 UniRef50_B1XJ17 Transcriptional repressor nrdR n=8 Tax=Bacteria ... 79 8e-13 UniRef50_Q2JVG1 Transcriptional repressor nrdR n=7 Tax=Bacteria ... 78 1e-12 UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alp... 77 3e-12 UniRef50_B8HVN1 Transcriptional repressor nrdR n=16 Tax=Bacteria... 76 5e-12 UniRef50_B1ZWW1 ATP-cone domain protein n=2 Tax=Opitutaceae RepI... 74 2e-11 UniRef50_A7HM70 Transcriptional repressor nrdR n=20 Tax=Bacteria... 71 2e-10 UniRef50_A2RN49 High confidence in function and specificity n=4 ... 69 5e-10 UniRef50_B8ILE2 Transcriptional repressor nrdR n=96 Tax=Proteoba... 69 8e-10 UniRef50_UPI00003827C9 COG1328: Oxygen-sensitive ribonucleoside-... 69 9e-10 UniRef50_C7NVI2 ATP-cone domain protein n=3 Tax=Halobacteriaceae... 67 2e-09 UniRef50_Q1AS42 Transcriptional repressor nrdR n=10 Tax=Bacteria... 67 2e-09 UniRef50_Q04J60 Transcriptional repressor nrdR n=27 Tax=Streptoc... 67 3e-09 UniRef50_Q1D346 Transcriptional repressor nrdR n=215 Tax=Bacteri... 66 6e-09 UniRef50_Q2FSI0 Oxygen-sensitive ribonucleoside-triphosphate red... 65 9e-09 UniRef50_B1L7E4 ATP-cone domain protein n=1 Tax=Candidatus Korar... 63 4e-08 UniRef50_B6WBR4 Putative uncharacterized protein n=2 Tax=Anaeroc... 63 4e-08 UniRef50_C2BEU7 Putative uncharacterized protein n=1 Tax=Anaeroc... 62 8e-08 UniRef50_C0QQA0 Transcriptional repressor nrdR n=4 Tax=Hydrogeno... 62 9e-08 UniRef50_Q0SSR4 Putative uncharacterized protein n=10 Tax=Clostr... 60 2e-07 UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Ba... 60 4e-07 UniRef50_C7RFT0 Putative uncharacterized protein n=2 Tax=Anaeroc... 59 4e-07 UniRef50_B1YDP3 ATP-cone domain protein n=16 Tax=Archaea RepID=B... 58 1e-06 UniRef50_C3X5R9 Anaerobic ribonucleoside-triphosphate reductase ... 52 8e-05 UniRef50_C9KLA5 Anaerobic ribonucleoside-triphosphate reductase ... 52 9e-05 UniRef50_B1H0N3 Putative ribonucleoside-triphosphate reductase n... 51 2e-04 UniRef50_C3XBZ1 Anaerobic ribonucleoside-triphosphate reductase ... 51 2e-04 UniRef50_Q9X7J8 Anaerobic ribonucleotide reductase (Fragment) n=... 51 2e-04 UniRef50_C8WNX8 Putative uncharacterized protein n=1 Tax=Eggerth... 49 5e-04 UniRef50_B2KDZ3 Putative uncharacterized protein n=1 Tax=Elusimi... 49 5e-04 UniRef50_C4V4U4 Putative uncharacterized protein n=2 Tax=Selenom... 49 6e-04 Sequences not found previously or not previously below threshold: UniRef50_D1AIQ0 Putative uncharacterized protein n=4 Tax=Bacteri... 143 3e-32 UniRef50_P37342 Uncharacterized protein yjjI n=153 Tax=Proteobac... 137 1e-30 UniRef50_UPI0001C361F0 hypothetical protein ChatD1_32948 n=2 Tax... 133 2e-29 UniRef50_P44744 Uncharacterized protein HI0521 n=23 Tax=Bacteria... 133 3e-29 UniRef50_C8W8Y4 Putative uncharacterized protein n=3 Tax=Bacteri... 127 2e-27 UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Sym... 88 1e-15 UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=ce... 77 2e-12 UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Lep... 77 2e-12 UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 77 3e-12 UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyr... 75 1e-11 UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Cop... 71 2e-10 UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Cal... 68 1e-09 UniRef50_C9R8L5 ATP-cone domain protein n=12 Tax=Bacteria RepID=... 66 5e-09 UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=ce... 66 5e-09 UniRef50_Q3IM07 Transcriptional repressor nrdR n=3 Tax=Halobacte... 66 5e-09 UniRef50_D1CDG5 ATP-cone domain protein n=1 Tax=Thermobaculum te... 66 5e-09 UniRef50_B1WNA0 Transcriptional repressor nrdR n=10 Tax=Bacteria... 65 8e-09 UniRef50_C6P8I1 ATP-cone domain protein n=6 Tax=Bacteria RepID=C... 63 3e-08 UniRef50_A6LMS2 Transcriptional repressor nrdR n=3 Tax=Bacteria ... 62 6e-08 UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 62 7e-08 UniRef50_D1Y5R6 Transcriptional regulator NrdR n=1 Tax=Pyramidob... 62 8e-08 UniRef50_A5G3K3 Transcriptional repressor nrdR n=5 Tax=Bacteria ... 62 9e-08 UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 61 1e-07 UniRef50_Q1JDF4 Transcriptional repressor nrdR n=213 Tax=Bacteri... 61 1e-07 UniRef50_A0Q128 Transcriptional repressor nrdR n=21 Tax=Clostrid... 61 2e-07 UniRef50_C2D6G3 NrdR family transcriptional regulator n=1 Tax=At... 61 2e-07 UniRef50_B8G2S3 Transcriptional repressor nrdR n=2 Tax=Chlorofle... 61 2e-07 UniRef50_Q03RK0 Transcriptional repressor nrdR n=49 Tax=Firmicut... 60 2e-07 UniRef50_A6G9U3 Putative uncharacterized protein n=1 Tax=Plesioc... 60 3e-07 UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=ce... 60 4e-07 UniRef50_Q6MNX8 Transcriptional repressor nrdR n=6 Tax=Bacteria ... 60 4e-07 UniRef50_C5CHN3 Transcriptional repressor nrdR n=16 Tax=Bacteria... 60 4e-07 UniRef50_A9WKI1 Transcriptional repressor nrdR n=17 Tax=Bacteria... 60 4e-07 UniRef50_C7GYP4 Transcriptional regulator NrdR n=1 Tax=Eubacteri... 60 4e-07 UniRef50_A1RYY0 ATP-cone domain protein n=2 Tax=Thermoproteales ... 59 4e-07 UniRef50_Q7UG92 Transcriptional repressor nrdR n=1 Tax=Rhodopire... 59 5e-07 UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylco... 59 6e-07 UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Ba... 59 7e-07 UniRef50_Q0AYE0 Transcriptional repressor nrdR n=3 Tax=Bacteria ... 59 7e-07 UniRef50_Q086C8 Transcriptional repressor nrdR n=50 Tax=Gammapro... 58 1e-06 UniRef50_C7LY15 ATP-cone domain protein n=1 Tax=Acidimicrobium f... 58 1e-06 UniRef50_C8WXT7 ATP-cone domain protein n=10 Tax=Bacteria RepID=... 57 2e-06 UniRef50_A3VLS6 Putative uncharacterized protein n=4 Tax=Alphapr... 57 2e-06 UniRef50_A7BD38 Putative uncharacterized protein n=1 Tax=Actinom... 57 2e-06 UniRef50_Q7U4S9 Transcriptional repressor nrdR n=23 Tax=Cyanobac... 57 2e-06 UniRef50_A0PT74 Transcriptional repressor nrdR n=33 Tax=Bacteria... 57 2e-06 UniRef50_D1BM27 ATP-cone domain protein n=3 Tax=Veillonella RepI... 57 3e-06 UniRef50_Q6A8Y9 Transcriptional repressor nrdR n=4 Tax=Actinomyc... 57 3e-06 UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 57 3e-06 UniRef50_C8PM01 Transcriptional regulator NrdR n=1 Tax=Treponema... 57 3e-06 UniRef50_B8GRT8 Transcriptional repressor nrdR n=144 Tax=Proteob... 57 4e-06 UniRef50_A7HX83 Transcriptional repressor nrdR n=85 Tax=Bacteria... 57 4e-06 UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=The... 56 4e-06 UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syn... 56 5e-06 UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alp... 56 5e-06 UniRef50_C8SAI5 Restriction endonuclease n=1 Tax=Ferroglobus pla... 56 5e-06 UniRef50_Q0RDY4 Putative regulatory protein nrdR n=1 Tax=Frankia... 56 6e-06 UniRef50_B8DSV1 Transcriptional repressor nrdR n=108 Tax=Actinob... 55 6e-06 UniRef50_B5JJP7 Transcriptional regulator NrdR n=1 Tax=Verrucomi... 55 1e-05 UniRef50_D0L1W9 ATP-cone domain protein n=1 Tax=Halothiobacillus... 55 1e-05 UniRef50_UPI0001698138 transcriptional regulator NrdR n=1 Tax=En... 55 1e-05 UniRef50_A5WI35 Transcriptional repressor nrdR n=4 Tax=Gammaprot... 54 1e-05 UniRef50_D0LGT6 ATP-cone domain protein n=1 Tax=Haliangium ochra... 54 2e-05 UniRef50_B0RZP1 Putative uncharacterized protein n=2 Tax=Finegol... 54 2e-05 UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 54 2e-05 UniRef50_A2SK03 Transcriptional repressor nrdR n=2 Tax=Burkholde... 54 2e-05 UniRef50_UPI0001C37AA6 transcriptional regulator NrdR n=1 Tax=Ru... 54 3e-05 UniRef50_C7N9D5 ATP-cone domain protein n=6 Tax=Fusobacteriaceae... 54 3e-05 UniRef50_B0P1H2 Putative uncharacterized protein n=1 Tax=Clostri... 53 4e-05 UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylco... 53 4e-05 UniRef50_C0DU07 Putative uncharacterized protein n=1 Tax=Eikenel... 53 4e-05 UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 53 5e-05 UniRef50_A8SJE3 Putative uncharacterized protein n=1 Tax=Parvimo... 52 5e-05 UniRef50_Q73N26 Transcriptional repressor nrdR n=2 Tax=Bacteria ... 52 6e-05 UniRef50_Q3ZZA1 Transcriptional repressor nrdR n=6 Tax=Bacteria ... 52 6e-05 UniRef50_C1F652 Transcriptional repressor nrdR n=63 Tax=Bacteria... 52 6e-05 UniRef50_B2UQD6 Transcriptional repressor nrdR n=1 Tax=Akkermans... 52 7e-05 UniRef50_A5ZR79 Putative uncharacterized protein n=1 Tax=Ruminoc... 52 7e-05 UniRef50_A1TYW9 Transcriptional repressor nrdR n=65 Tax=Proteoba... 52 7e-05 UniRef50_D1AYC7 ATP-cone domain protein n=2 Tax=Fusobacteriaceae... 52 9e-05 UniRef50_D0WEJ6 Iron oxidase n=1 Tax=Slackia exigua ATCC 700122 ... 52 1e-04 UniRef50_C1XFP5 Transcriptional regulator NrdR n=1 Tax=Meiotherm... 52 1e-04 UniRef50_B2UYR3 Putative uncharacterized protein n=3 Tax=Clostri... 51 1e-04 UniRef50_A3UCB8 Putative uncharacterized protein n=1 Tax=Oceanic... 51 2e-04 UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=un... 51 2e-04 UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 51 2e-04 UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkhol... 50 2e-04 UniRef50_C4IB17 Putative anaerobic ribonucleoside-triphosphate r... 50 3e-04 UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=unc... 50 3e-04 UniRef50_Q2GE55 Transcriptional repressor nrdR n=2 Tax=Neoricket... 50 3e-04 UniRef50_Q3YSX9 Transcriptional repressor nrdR n=10 Tax=Anaplasm... 50 3e-04 UniRef50_B3DVB4 Transcriptional repressor nrdR n=4 Tax=Bacteria ... 50 3e-04 UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subu... 50 4e-04 UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Fi... 50 4e-04 UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Met... 50 4e-04 UniRef50_A6DMG1 Putative uncharacterized protein n=1 Tax=Lentisp... 49 5e-04 UniRef50_Q5P7P0 Transcriptional repressor nrdR n=3 Tax=Rhodocycl... 49 5e-04 UniRef50_A1SNC7 Transcriptional repressor nrdR n=10 Tax=Actinomy... 49 5e-04 UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Ba... 49 6e-04 UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Ali... 49 6e-04 UniRef50_Q64CV2 Ribonucleotide-triphosphate reductase n=1 Tax=un... 49 7e-04 UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hyd... 49 7e-04 UniRef50_C7RBJ3 Putative uncharacterized protein n=1 Tax=Kangiel... 49 8e-04 UniRef50_Q0AFT7 Transcriptional repressor nrdR n=29 Tax=Proteoba... 49 0.001 >UniRef50_Q9L646 Anaerobic ribonucleoside-triphosphate reductase n=233 Tax=root RepID=NRDD_SALTY Length = 712 Score = 857 bits (2214), Expect = 0.0, Method: Composition-based stats. Identities = 688/712 (96%), Positives = 697/712 (97%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 MTPHVMKRDGCKVPFKSERIKEAILRAAKAA VDDADYCATVA VVS QM R+QVDINE Sbjct: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAGVDDADYCATVAEVVSSQMNARSQVDINE 60 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQTAVENQLMSGPYKQLARAYIEYRHDRDI+REKRGRLNQEIRGLVEQTN++LLNENANK Sbjct: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIQREKRGRLNQEIRGLVEQTNSALLNENANK 120 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL Sbjct: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 Query: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY 240 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT SY Sbjct: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTESY 240 Query: 241 NKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 NKHRKTA+EW IPDAEGYA SRT KECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS Sbjct: 241 NKHRKTADEWQIPDAEGYARSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 Query: 301 WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR 360 WESRLIQ SILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK GDPNYDIKQLALECASKR Sbjct: 301 WESRLIQASILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDPNYDIKQLALECASKR 360 Query: 361 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA 420 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA Sbjct: 361 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA 420 Query: 421 KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIF 480 KGDE FWKLLDERL LARKALMTRIARLEGVKARVAPILYMEGACGVRL ADDDVSEIF Sbjct: 421 KGDETAFWKLLDERLALARKALMTRIARLEGVKARVAPILYMEGACGVRLKADDDVSEIF 480 Query: 481 KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFS 540 KNGRASISLGYIGIHETINALFGGEH+YD+EQLRAKGIAIVERLRQAVDQWK+ETGYGFS Sbjct: 481 KNGRASISLGYIGIHETINALFGGEHLYDSEQLRAKGIAIVERLRQAVDQWKDETGYGFS 540 Query: 541 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL 600 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL Sbjct: 541 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL 600 Query: 601 ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF 660 ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF Sbjct: 601 ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF 660 Query: 661 TCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 TCPKCGNHDA+RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG Sbjct: 661 TCPKCGNHDAARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 >UniRef50_P43752 Anaerobic ribonucleoside-triphosphate reductase n=182 Tax=root RepID=NRDD_HAEIN Length = 707 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 544/704 (77%), Positives = 621/704 (88%), Gaps = 4/704 (0%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDINEIQ 62 V+KRDG + F+ +RI AI +AA A + D YC + V ++ + + ++DIN+IQ Sbjct: 6 VIKRDGSRAEFEIQRIINAIKKAASAVNISDEFYCHQIGQEVGNEIFTRHQGEIDINQIQ 65 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 VE++LM+ Y ++ARAYIEYRHDRD+ REKR +L +EI GL+EQ+N LLNENANKD+ Sbjct: 66 KIVEDKLMASRYPEVARAYIEYRHDRDLAREKRSQLTKEIEGLIEQSNVELLNENANKDA 125 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182 KVIPTQRDLLAGIVAKHYA+ ++LPRDVV+AHE+G+IHYHDLDY+PFFPMFNCML+DL+G Sbjct: 126 KVIPTQRDLLAGIVAKHYAKHNILPRDVVEAHEKGEIHYHDLDYAPFFPMFNCMLVDLEG 185 Query: 183 MLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242 ML++GFKMGNAEIEPPKSI TATAVTAQIIAQVASHIYGGTTINRIDEVL+P+V SY K Sbjct: 186 MLSRGFKMGNAEIEPPKSIGTATAVTAQIIAQVASHIYGGTTINRIDEVLSPYVQISYEK 245 Query: 243 HRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWE 302 H K A+EWN+PD EGYA + KEC+DAFQSLEYEVNTLHT+NGQTPFVTFGFGLGTSW+ Sbjct: 246 HLKHAQEWNVPDVEGYAKALIEKECFDAFQSLEYEVNTLHTSNGQTPFVTFGFGLGTSWQ 305 Query: 303 SRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMY 362 SRLIQ++IL+NRI GLGKN KT VFPKLVF I+ GLN KGDPNYDIKQLALECASKRMY Sbjct: 306 SRLIQQAILKNRIRGLGKNHKTPVFPKLVFTIKKGLNQNKGDPNYDIKQLALECASKRMY 365 Query: 363 PDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKG 422 PDILNYDQVVKVTGSFK PMGCRSFLG +E E G +IHDGRNNLGV+SLNLPRIALE+K Sbjct: 366 PDILNYDQVVKVTGSFKAPMGCRSFLGAYE-EKGHEIHDGRNNLGVVSLNLPRIALESK- 423 Query: 423 DEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKN 482 +E F++ LDERL +A+KALMTRIARLE KARVAPILYMEGACGVRL AD++V++IFKN Sbjct: 424 NEEDFYRTLDERLAIAKKALMTRIARLENTKARVAPILYMEGACGVRLKADENVAQIFKN 483 Query: 483 GRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLY 542 GRASISLGYIGIHETINAL+ H++D+EQLR KGIAIV L +AV +W++ETGY FSLY Sbjct: 484 GRASISLGYIGIHETINALYNKGHIFDDEQLREKGIAIVRHLSEAVKRWQKETGYAFSLY 543 Query: 543 STPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLAN 602 STPSENLCDRFCRLDT +FGV+ GVTDKGYYTNS+HLDVEKKVNPYDK+DFE YPPLA+ Sbjct: 544 STPSENLCDRFCRLDTKKFGVIEGVTDKGYYTNSYHLDVEKKVNPYDKLDFEMTYPPLAS 603 Query: 603 GGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTC 662 GGFICYGEYPNIQHNLKALEDVWDYSY VPYYGTNTPIDECYECGFTGEFECTSKGF C Sbjct: 604 GGFICYGEYPNIQHNLKALEDVWDYSYDRVPYYGTNTPIDECYECGFTGEFECTSKGFVC 663 Query: 663 PKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 PKCGNHD+++VSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL Sbjct: 664 PKCGNHDSTKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 707 >UniRef50_D1BHZ8 Ribonucleoside-triphosphate reductase class III catalytic subunit n=23 Tax=Bacteria RepID=D1BHZ8_SANKS Length = 754 Score = 771 bits (1991), Expect = 0.0, Method: Composition-based stats. Identities = 372/720 (51%), Positives = 476/720 (66%), Gaps = 11/720 (1%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCAT----VAAVVSEQMQGR--N 54 + P V+KRDG + R++ A+ A V A + V ++ R + Sbjct: 28 LAPAVLKRDGRVAEYDPARVERALTSAFADVHVGPAQLVRPAVLGLTEQVGAEIARRFTD 87 Query: 55 QVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLL 114 V I EIQ VE+ L+ + ++A AYI YR RD+ R + +N I L+ + + S++ Sbjct: 88 TVQIYEIQNVVEHVLLESRHYEVAEAYIAYRVRRDVARNRTTDVNHSIGELLSKAS-SVV 146 Query: 115 NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFN 174 NENANKDS V TQRDL AG V K +LP V AH++G+IHYHDLDY P+ PM N Sbjct: 147 NENANKDSDVFNTQRDLTAGAVGKAVGLT-MLPAHVANAHQKGEIHYHDLDYHPYSPMTN 205 Query: 175 CMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 234 C LID + ML +GF++GNAE+EPP+SI TATA QIIA V+S YGG T+NRIDE+LAP Sbjct: 206 CCLIDFRSMLGEGFRIGNAEVEPPRSIQTATAQITQIIANVSSSQYGGCTVNRIDELLAP 265 Query: 235 FVTASYNKHRKTAEEWNIP--DAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT 292 + ++ KH A EW YA ++T K+ +DA QSLEYE+NTL T+NGQTPF + Sbjct: 266 YAERNFAKHLADAMEWVSEPGRRREYAEAKTRKDIHDAMQSLEYEINTLFTSNGQTPFTS 325 Query: 293 FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQL 352 GFGLGT W R IQ++ILR RI GLG +TA+FPKL+F +R G+N + GDPNYDIKQ Sbjct: 326 LGFGLGTGWFEREIQQAILRIRIEGLGGEHRTAIFPKLIFTLRRGVNLEAGDPNYDIKQT 385 Query: 353 ALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLN 412 ALEC++KRMYPD+L+YD++V++TGSFK PMGCRSFL WE+E+GE + +GR NLGV++LN Sbjct: 386 ALECSTKRMYPDVLSYDKIVELTGSFKAPMGCRSFLQGWEDEHGEDVVEGRMNLGVVTLN 445 Query: 413 LPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNA 472 LPRIALE+ G TFW LLDERL R AL+ R+ R APILY GA G RL+ Sbjct: 446 LPRIALESHGSTETFWALLDERLDTVRDALLFRVDRCREATPGNAPILYRYGAFGQRLDP 505 Query: 473 DDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK 532 D+ V +F++GRA++SLGYIG++ET A FGG + + + I+ L QW Sbjct: 506 DEAVDTLFRDGRATVSLGYIGLYETAAAFFGGA-WEGDAAAKDFTLDILGTLAARAQQWT 564 Query: 533 EETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKID 592 E Y FS+YSTPSE+L DRFCRLD A+FG V +TDK YYTNSFH DV K P++K+D Sbjct: 565 NEHSYKFSVYSTPSESLTDRFCRLDKAKFGSVEDITDKDYYTNSFHYDVRKNPTPFEKLD 624 Query: 593 FEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGE 652 FE YP L GGFI Y EYP +QHN +ALE VWDY+Y V Y GTNTPID CY CGF+G+ Sbjct: 625 FEKDYPQLTAGGFIHYCEYPILQHNPRALEAVWDYAYDRVGYLGTNTPIDRCYACGFSGD 684 Query: 653 FECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 F T++GF CP C N D V +R CGYLG+P ARP G+ E+ RVKH+ G G Sbjct: 685 FTPTARGFACPGCDNSDPRTCDVVKRTCGYLGNPQARPMVHGRHVEISSRVKHMPAGDEG 744 >UniRef50_Q032I4 Ribonucleoside-triphosphate reductase / ribonucleoside-triphosphate reductase class III catalytic subunit n=156 Tax=Bacteria RepID=Q032I4_LACLS Length = 747 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 369/714 (51%), Positives = 488/714 (68%), Gaps = 9/714 (1%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDINE 60 +V+KRDG V F SE+I +A+ +AAK E+ D + + V ++ R V I E Sbjct: 15 INVIKRDGRSVKFNSEKIFDALTKAAKKVELTDMSVLSELTDRVVSEIFTRFSENVKIYE 74 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQ+ VE +L+ QLA YI YR +RD+ R K +N I L+ + + +++NENANK Sbjct: 75 IQSIVEQELLESGETQLAEEYISYRANRDLARTKATDINFTIEKLINR-DQTVVNENANK 133 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 DS V TQRDL AG V+K + LLP V AH++GDIHYHDLDYSPF M NC LID Sbjct: 134 DSNVFNTQRDLTAGAVSKAIGLK-LLPPQVANAHQKGDIHYHDLDYSPFTTMANCCLIDF 192 Query: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY 240 K M GFK+GNA+++ PKSI TATA +QIIA VAS YGG + +R DEVLAP+ +Y Sbjct: 193 KNMFENGFKLGNAQVDSPKSIQTATAQASQIIANVASSQYGGCSFDRADEVLAPYAKLNY 252 Query: 241 NKHRKTAEEWN--IPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLG 298 KH K A++W E YA +T K+ YDA QSLEYE+NTL T+NGQTPFVT GFGLG Sbjct: 253 KKHLKDAQKWIDGAEKQEAYAREKTAKDIYDAMQSLEYEINTLFTSNGQTPFVTVGFGLG 312 Query: 299 TSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECAS 358 W +R IQ++IL RI GLG +TA+FPKL+F ++ GLN + G PNYDIK+LALEC++ Sbjct: 313 DDWYAREIQKAILNVRIGGLGSEHRTAIFPKLIFTLKRGLNLEVGTPNYDIKELALECST 372 Query: 359 KRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIAL 418 KRMYPDIL+YD++V++TGSFK MGCRSFL W +ENG + GRNNLGV+++NLPRIAL Sbjct: 373 KRMYPDILSYDKIVELTGSFKASMGCRSFLQGWRDENGNDVTAGRNNLGVVTVNLPRIAL 432 Query: 419 EAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSE 478 EA G++ FW++ +ER+ +A AL R+ R + + + APIL+M GA G RL+A+ V E Sbjct: 433 EAAGNKEKFWEIFNERIEIAHDALAFRVERAKEAQPKNAPILFMNGALG-RLDAEGSVDE 491 Query: 479 IFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYG 538 ++ R+++SLGYIG++E +G +N + +A I IV+R+ + + W + +GY Sbjct: 492 LYNKERSTVSLGYIGLYEVATTFYG-PTWENNPEAKAFTIEIVKRMHEDCEDWSKASGYH 550 Query: 539 FSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYP 598 +S+YSTPSE+L DRFCR+D +FG V +TDK YYTNSFH DV K P++K++FE YP Sbjct: 551 YSVYSTPSESLTDRFCRMDKEKFGSVADITDKDYYTNSFHYDVRKNPTPFEKLEFEKDYP 610 Query: 599 PLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSK 658 ANGGFI Y EYP +Q N KALE VWD++Y + Y GTN PID CY CGF G+F T + Sbjct: 611 VYANGGFIHYCEYPVLQQNPKALEAVWDFAYDRIGYLGTNAPIDHCYACGFEGDFAATER 670 Query: 659 GFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 GF CP+CGN D V +R CGYLG+P ARP G+ +E+ RVKH+ NG +G Sbjct: 671 GFKCPQCGNDDPKTCDVVKRTCGYLGNPQARPMVHGRHKEISSRVKHM-NGSVG 723 >UniRef50_UPI0001BC56DE anaerobic ribonucleoside triphosphate reductase n=3 Tax=Fusobacterium RepID=UPI0001BC56DE Length = 750 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 302/737 (40%), Positives = 434/737 (58%), Gaps = 37/737 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKA-AEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V+KRDG + F ++RI AI A K + V + + +A + + + EI Sbjct: 19 KKVIKRDGTVIDFDAQRIVNAISMAFKQHSRVIPEELVSKIAHQIENL--ENKIMSVEEI 76 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 Q V +LM+ K +A AY YR + R K + ++I LV+ +N SLL ENANKD Sbjct: 77 QDLVVKKLMASSEKDIAMAYQSYRTLKTEIRNKEKSIYKQIGELVDASNESLLIENANKD 136 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 +K I QRDLLAGI ++ Y ++PR + +AH +G+IH HDLDY F NC L++++ Sbjct: 137 AKTISVQRDLLAGISSRDYYLNKIVPRHIKEAHIKGEIHLHDLDYLLFR-ETNCELVNIE 195 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 ML G +GNA++ P S+ A QIIA V+S+ YGG +I +D L P++ S+ Sbjct: 196 RMLKGGCNIGNAKMLEPNSVDVAVGHIIQIIASVSSNTYGGCSIPYLDRALVPYIQKSFY 255 Query: 242 KHRK------------------------------TAEEWNIPDAEGYANSRTIKECYDAF 271 KH K + P A YA T + A Sbjct: 256 KHFKRGLYYTENMNEEKAEEILASYGRTGIIYDNQELKEKYPKAYRYAADLTEESVKQAM 315 Query: 272 QSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLV 331 Q LEYE+N+L T NGQTPF T G G TSWE RL+Q+ + + R+ G GKN++TA+FPK+ Sbjct: 316 QGLEYEINSLSTVNGQTPFTTIGIGTETSWEGRLVQKYVFKTRMDGFGKNKETAIFPKIA 375 Query: 332 FAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 +A+ + LN PN+DI QLA EC +K +YPDIL Q G+ PMGCR+FL W Sbjct: 376 YAMTEKLNLNPDSPNWDIAQLAFECMTKSIYPDILFITQEQWEQGTVVYPMGCRAFLSPW 435 Query: 392 ENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEG 451 +NE G++I+ GR N G S+NLPR+A++ GDE F++ LD L + ++ + R LE Sbjct: 436 KNEEGKEIYAGRFNFGATSMNLPRMAIKNPGDEKGFYRELDRVLEICKENCIFRAKYLEK 495 Query: 452 VKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNE 511 A +APIL+M GA + + ++++ G A++S+GYIG+ E L+G + D E Sbjct: 496 TTADIAPILWMYGALAEK-EEKETIADLIWGGYATVSIGYIGLSEVSQLLYGKDFAQD-E 553 Query: 512 QLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG 571 ++ K AI++ + ++Q+K ETG GF++Y TPSE+LCDRF ++D EFG +PG+TDKG Sbjct: 554 EVYKKSFAILKYIADKLEQFKAETGLGFAMYGTPSESLCDRFAKMDQKEFGDIPGITDKG 613 Query: 572 YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ- 630 YY NSFH+ K++ ++K+ EA + GG I Y E ++Q N++A+ + Y+ Sbjct: 614 YYDNSFHVSSRLKMDQFEKLRLEALGHQYSKGGHISYIETDSLQKNIEAIPAILRYAKSV 673 Query: 631 HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARP 690 + Y G N P+D+CY CG+ GEF T GFTCP+CGNHD ++SV RRVCGYL P+ARP Sbjct: 674 GIHYMGINQPVDKCYVCGYKGEFSATENGFTCPQCGNHDNKKMSVIRRVCGYLAQPNARP 733 Query: 691 FNAGKQEEVKRRVKHLG 707 FN GKQ+E+ RVKH G Sbjct: 734 FNKGKQKEIMSRVKHNG 750 >UniRef50_D2RBY9 Anaerobic ribonucleoside-triphosphate reductase n=12 Tax=Bacteria RepID=D2RBY9_GARVA Length = 805 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 349/765 (45%), Positives = 469/765 (61%), Gaps = 60/765 (7%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVD----DADYCATVAAVVSEQMQGR--NQVD 57 V KRDG V F I AI A K + + ++ + ++Q R Sbjct: 28 QVEKRDGRVVDFDPLNIIMAIKAAFKDLGKEIGPQEEQLIRNISDHIEAEIQDRYNGPAK 87 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 I +IQT VE+ L+ ++AR Y YR +RDI+R + +N+ + LV + + SL+ EN Sbjct: 88 IEDIQTLVEHSLIENHLYEVARCYTSYRLNRDIDRARATDINEAVNRLVNR-DESLVREN 146 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 ANKDS V TQRDLLAG V+K A +LP V AH +GDIH+HD DYSPF M NC L Sbjct: 147 ANKDSNVYATQRDLLAGAVSKASAFS-MLPHAVSNAHMKGDIHFHDADYSPFTCMSNCSL 205 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 D ML +GF +GNA ++ PKSI TA QII +A YGG T+NR DE+L P+ Sbjct: 206 PDFGDMLAKGFALGNAMMDSPKSIGTAATQVTQIIKDIAGAQYGGQTVNRADEMLEPYAK 265 Query: 238 ASYNKHRKTAEEWNIP-------------------------------------------- 253 Y+K+ A Sbjct: 266 CDYDKNLAMAHAMIPDSTPIQVAKDMIDGLKAQEPKNLHCLDRDPLPADTPFDENLSELD 325 Query: 254 -DAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILR 312 E YA T K YDA Q++EY++N+ +NGQTPFVT GFGLGTSW +R IQ +IL Sbjct: 326 QLREVYAKIMTRKAIYDAMQTMEYQINSNRVSNGQTPFVTVGFGLGTSWFAREIQRAILL 385 Query: 313 NRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVV 372 NRI GLGK+R TA+FPKLVF I+ G+N GDPNYD+KQLALEC++KRMYPD++ Y+ +V Sbjct: 386 NRIRGLGKDRHTAIFPKLVFTIKHGVNADAGDPNYDLKQLALECSTKRMYPDVVFYENIV 445 Query: 373 KVTGSFKTPMGCRSFLGVW-ENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLL 431 K+TGSFK PMGCRSFL W + + G+ + DGR NLGV+++N+PRIALE+ GD FWKL Sbjct: 446 KITGSFKAPMGCRSFLQGWIDPKTGKDVEDGRMNLGVVTVNMPRIALESHGDVTRFWKLF 505 Query: 432 DERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGY 491 DER+ +A +AL RI R + AP L+ GA G RL A++ V ++F+N RA++SLGY Sbjct: 506 DERMEVAHQALRFRIMRCKQATPVNAPTLFRYGAFG-RLEANESVDQLFRNERATVSLGY 564 Query: 492 IGIHETINALFGGEHVYD---NEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSEN 548 IG++ET FG + + D NE+ + +++V R+ + QW + GY +S+YSTP+E+ Sbjct: 565 IGLYETTAVFFGKDWMQDHSWNEEGKEFALSLVRRMNKLCQQWSKAEGYHYSVYSTPAES 624 Query: 549 LCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY 608 L DRF R+D +FG + GVTD +YTNSFH V + P +K+ +E +P LA+GGFI Y Sbjct: 625 LTDRFNRMDRQKFGRIEGVTDHDFYTNSFHYPVWLQPTPMEKLRYEVDFPYLASGGFINY 684 Query: 609 GEYPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGN 667 E+P +Q N KALE VWDY+Y+ + Y GTNTPID C+ CGF G+FE T +GF CP+CGN Sbjct: 685 CEFPCLQANPKALEAVWDYAYKIGIGYLGTNTPIDHCFVCGFQGDFEPTKEGFRCPECGN 744 Query: 668 HDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 D + +VT+R CGYLG+P RP G+ EE+ RVKH+ +G+ G Sbjct: 745 SDPDKCNVTKRTCGYLGNPVQRPMVHGRHEEIAHRVKHM-SGETG 788 >UniRef50_C3WCA1 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCA1_FUSMR Length = 729 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 297/732 (40%), Positives = 433/732 (59%), Gaps = 34/732 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAK-AAEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V+KRDG V F +RI A+ A K ++ + + + + ++ + +I Sbjct: 2 KEVIKRDGAIVEFDRDRIVRAMTMAFKQSSGTVNNELVEKITTQIEN--MDNKRMHVEDI 59 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 Q V +LM+ K +A AY YR + R K + + I LV+ +N +L+ENANKD Sbjct: 60 QDIVVKKLMASSEKDIAIAYQSYRAIKTEIRNKEKGIYKNIAELVDASNEDILSENANKD 119 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 +K I QRDLLAGI +K Y +LP+ + +AHE G+IH HDLDY F NC L+ ++ Sbjct: 120 AKTISVQRDLLAGISSKDYYLNKILPKHLKKAHETGEIHIHDLDYLLF-KETNCELVHIE 178 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 ML G +GNA++ P S+ A QIIA V+S+ YGG +I +D L P++ S+ Sbjct: 179 RMLKGGCNIGNAKMLEPNSVDVAVGHIVQIIASVSSNTYGGCSIPYLDRALVPYIKKSFK 238 Query: 242 KHRKTAEEWN---------------------------IPDAEGYANSRTIKECYDAFQSL 274 KH ++ P A Y+ T + A Q L Sbjct: 239 KHFTKGLKYVERVDEATIKEIIDRGNIEYSNMELKEKYPLAYEYSCDLTRESVKQAMQGL 298 Query: 275 EYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI 334 EYE+N+L T NGQTPF T G G TSWE RL+QE + R R+ G G ++TA+FPK+V+A+ Sbjct: 299 EYEINSLSTVNGQTPFTTIGIGTETSWEGRLVQEFVFRTRMEGFGAKKETAIFPKIVYAM 358 Query: 335 RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENE 394 +GLN + DPN+DI QL EC +K +YPDIL + G+ PMGCR+FL W +E Sbjct: 359 CEGLNMNEEDPNWDIAQLGFECMTKSIYPDILFITKEQLEKGTVVYPMGCRAFLSPWFDE 418 Query: 395 NGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKA 454 GE+I+ GR N+G ++NLPRIA++ +GDEA F+K LD + + ++ + R LE +A Sbjct: 419 KGEEIYSGRFNIGATTINLPRIAIKNRGDEAGFYKELDRVMEMCKENSVFRAHYLEKTQA 478 Query: 455 RVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLR 514 +APIL+ GA + + + ++ G A++S+GYIG+ E L+G + Y NE++ Sbjct: 479 EMAPILWQSGALAEK-QPKETIKDLIWGGYATVSIGYIGLSEVSQLLYGEDFAY-NEEIY 536 Query: 515 AKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYT 574 K I++ + + V Q+K ET GF+LY TPSE+LCDRF R+D EFG + G+TDKGYY Sbjct: 537 EKTFNILKYISEKVAQFKAETNLGFALYGTPSESLCDRFARIDREEFGDIEGITDKGYYD 596 Query: 575 NSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ-HVP 633 NSFH+ +NP++K+ EA + GG I Y E ++++NL+A+ ++ Y+ + + Sbjct: 597 NSFHVSSHININPFEKLRLEALGHQYSKGGHISYIETDSLKNNLEAIIEILRYAKEIGIH 656 Query: 634 YYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNA 693 Y G N P+D+C+ CGF GEF T +GF CP+CGNH+ ++SV RRVCGYL P+ARPFN Sbjct: 657 YMGINQPVDKCHVCGFKGEFLATERGFECPQCGNHENDKMSVIRRVCGYLSQPNARPFNK 716 Query: 694 GKQEEVKRRVKH 705 GKQ+E+ RVKH Sbjct: 717 GKQKEIISRVKH 728 >UniRef50_Q7P4N7 Anaerobic ribonucleoside-triphosphate reductase n=10 Tax=Fusobacterium RepID=Q7P4N7_FUSNV Length = 728 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 296/731 (40%), Positives = 431/731 (58%), Gaps = 33/731 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAA-KAAEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V+KRDG V F RI AI + +A+ + +A+ V + + + +I Sbjct: 2 KRVIKRDGSVVEFDKSRIINAIKKTFEQASREPNMKLIEKIASQVEDLPD--KVLAVEQI 59 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 Q V +LM K +A +Y YR + REK + ++I LV+ +N LL+ENANKD Sbjct: 60 QDIVVKKLMGSSEKDIAMSYQSYRTLKAEIREKEKGIYRQIGELVDASNEKLLSENANKD 119 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 +K I QRDLLAGI ++ Y ++P + AH +G+IH HDLDY F NC L++++ Sbjct: 120 AKTISVQRDLLAGISSRDYYLNKIVPEHIKLAHIKGEIHLHDLDYLLFR-ETNCELVNIE 178 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 ML G +GNA++ P S+ A QIIA V+S+ YGG +I +D L ++ ++ Sbjct: 179 TMLRGGCNIGNAKMLEPNSVDVAVGHIVQIIASVSSNTYGGCSIPYLDRALVRYIKKTFK 238 Query: 242 KHR-------------------KTAEEWN-------IPDAEGYANSRTIKECYDAFQSLE 275 KH K E+ P Y+ T + A Q LE Sbjct: 239 KHFLRGVKYIDDLNEEQIEELKKQDLEYLNEEIKNKYPKTYEYSVDMTEESVKQAMQGLE 298 Query: 276 YEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIR 335 YE+N+L T NGQTPF T G G TSWE RL+Q+ +L+ R+AG G ++TA+FPK+V+A+ Sbjct: 299 YEINSLSTVNGQTPFTTIGIGTETSWEGRLVQKYVLKTRMAGFGAKKETAIFPKIVYAMC 358 Query: 336 DGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENEN 395 +GLN +GDPN+DI QLA EC +K +YPDIL + PMGCR+FL +W++EN Sbjct: 359 EGLNLNEGDPNWDISQLAFECMTKSIYPDILFITPEQLKNETVVYPMGCRAFLSLWKDEN 418 Query: 396 GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKAR 455 G++ + GR N+G S+NLPRIA++ +GDE F+K LD L + + + R LE A Sbjct: 419 GKEKYAGRFNIGATSINLPRIAIKNRGDEEGFYKELDRILEICKDNCLFRARYLENTVAE 478 Query: 456 VAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRA 515 +APIL+M GA + D + ++ G +++S+GYIG+ E L+G + ++E++ Sbjct: 479 MAPILWMSGALAEK-KPKDTIKDLIWGGYSTVSIGYIGLSEVSQLLYGKD-FSESEEVYQ 536 Query: 516 KGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTN 575 K I++ + V ++KE+ GF+LY TPSE+LCDRF R+D EFG + G+TDKGYY N Sbjct: 537 KTFNILKYIADKVLEYKEKYNLGFALYGTPSESLCDRFARIDKQEFGDIKGITDKGYYDN 596 Query: 576 SFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ-HVPY 634 SFH+ ++P++K+ EA + GG I Y E ++ NL A+ D+ Y+ + Y Sbjct: 597 SFHVSSRINMSPFEKLRLEALGHKYSAGGHISYIETDSLTKNLDAIPDILRYAKSVGIHY 656 Query: 635 YGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAG 694 G N P+D+C+ CG+ GEF T +GFTCP+CGNHD++ +SV RRVCGYL P+ARPFN G Sbjct: 657 MGINQPVDKCHICGYKGEFTATKEGFTCPQCGNHDSNEMSVIRRVCGYLSQPNARPFNKG 716 Query: 695 KQEEVKRRVKH 705 KQEE+ RVKH Sbjct: 717 KQEEIMHRVKH 727 >UniRef50_B8DWG9 Anaerobic ribonucleoside-triphosphate reductase n=15 Tax=Bacteria RepID=B8DWG9_BIFA0 Length = 808 Score = 713 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 340/762 (44%), Positives = 456/762 (59%), Gaps = 59/762 (7%) Query: 5 VMKRDGCKVPFKSERIKEAILRAA----KAAEVDDADYCATVAAVVSEQMQGR--NQVDI 58 V KRDG V F I A+ A K + +A + +++ R I Sbjct: 32 VEKRDGRVVDFDPVNIVVAVKSAFADLDKEVGPQEERMILDIANQIEGEIRERYNGPAKI 91 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 +IQ VE+ L+ ++AR Y YR ++DI+R K +N+ + LV + + SL+ ENA Sbjct: 92 EDIQNLVEHALIEDHLYEVARTYTNYRLNKDIQRAKATDINEAVSRLVNR-DESLVRENA 150 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 NKDS V TQRDLLAG V+K A +LP V AH +GDIH+HD DYSPF M NC L Sbjct: 151 NKDSNVYATQRDLLAGAVSKASAFS-MLPDAVANAHMKGDIHFHDADYSPFTSMNNCSLP 209 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 D ML GF +GNA ++ PKSI TA+ QII +A YGG T+NR DE+L + Sbjct: 210 DFGDMLKHGFALGNAMMDSPKSIGTASTQITQIIKDIAGAQYGGQTVNRADEMLEEYAKR 269 Query: 239 SYNKHRKTAEEWNIPD-------------------------------------------- 254 Y K+ A Sbjct: 270 DYVKNLDMAHAMIPDSTPIEVARDMVAGLKAQEPRWLHFENREPLPADEAFDTNAPELEQ 329 Query: 255 -AEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRN 313 E YA T K YDA Q++EY++N+ +NGQTPFVT GFGLG SW +R IQ +IL N Sbjct: 330 IREIYAKIMTRKAIYDAMQTMEYQINSNRVSNGQTPFVTVGFGLGMSWFAREIQRAILLN 389 Query: 314 RIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVK 373 RI GLGK R TA+FPKLVF ++ G+N +GDPNYD+KQLALECA+KRMYPD++ YD +VK Sbjct: 390 RIRGLGKERHTAIFPKLVFTVKHGVNADEGDPNYDLKQLALECATKRMYPDVVFYDNIVK 449 Query: 374 VTGSFKTPMGCRSFLGVW-ENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLD 432 +TGSFK PMGCRSFL W + + G+ + DGR NLGV+++N+PRIALE+ GD FWK+ D Sbjct: 450 ITGSFKAPMGCRSFLQGWIDPKTGKDVEDGRMNLGVVTVNVPRIALESHGDVERFWKIFD 509 Query: 433 ERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYI 492 ER+ +A +AL RI R + AP L+ GA G RL +++V ++F+N RA++SLGYI Sbjct: 510 ERMEVAHQALQFRIMRCKQATPVNAPTLFRYGAFG-RLETNENVDQLFRNERATVSLGYI 568 Query: 493 GIHETINALFGGEHVYD---NEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENL 549 G++E FG + + D + + + ++IV R+ + QW + GY +S+YSTP+E+L Sbjct: 569 GLYEATAVFFGKDWMRDHAWDPEGKDFALSIVRRMNELCKQWSKAEGYHYSVYSTPAESL 628 Query: 550 CDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYG 609 DRF R+D +FG V GVTD +YTNSFH V + P +K+D+E +P A+GGFI Y Sbjct: 629 TDRFNRMDRKKFGKVEGVTDHDFYTNSFHYPVWLQPTPMEKLDYEKDFPYYASGGFINYC 688 Query: 610 EYPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNH 668 E+P +Q N KALE VWDY+Y + Y GTNTPID C+ CGF G+F T +GF CP+CGN Sbjct: 689 EFPCLQANPKALEAVWDYAYNIGIGYLGTNTPIDHCFVCGFEGDFAPTEEGFKCPECGNS 748 Query: 669 DASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQ 710 D + +VT+R CGYLG+P RP G+ EE+ RVKH+ Sbjct: 749 DPDKCNVTKRTCGYLGNPVQRPMVHGRHEEIAHRVKHMAGET 790 >UniRef50_D1BVJ9 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BVJ9_XYLCX Length = 765 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 338/741 (45%), Positives = 444/741 (59%), Gaps = 38/741 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRA---AKAAEVDDADYCATVAAVVSEQMQG-RNQVDI 58 P V+KRDG + + R+++AI A A VD+++ A VAAV E + V + Sbjct: 23 PTVIKRDGTRTTYDLRRVRDAIRPAWMRAWDDAVDESELAAVVAAVDGEIFRRFPTDVKV 82 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 EIQ VE L+ + +A Y YR ++D+ R++ + ++ L T++ + NENA Sbjct: 83 YEIQAIVEQTLIETGHGDVAEIYATYRLEKDLRRKQAFSVEHQVGRL---TDSEVANENA 139 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 NKDS+V QRD +AG VAK +LP V AH +G IH+HDLDYSP+ P NC L Sbjct: 140 NKDSRVFHVQRDRMAGSVAKARGLA-MLPPRVASAHIKGQIHFHDLDYSPYTPFNNCDLP 198 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 + ML GF MGNA++E PKSI TA + AQ+I V+S YGG TI ID +LAP+ Sbjct: 199 NFADMLANGFTMGNAQVESPKSIETAASQLAQLIIAVSSSQYGGVTIETIDLLLAPYAEK 258 Query: 239 SYNKHRKTAEEWNIPD--AEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFG 296 SY KH TA +W + + YA TIKE YD+ Q+L + VNT + GQTPFV+ G G Sbjct: 259 SYQKHLATAAKWIRDESDRDAYARDLTIKEIYDSAQTLLFNVNTTASTQGQTPFVSIGLG 318 Query: 297 LGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALEC 356 LGTSW R IQ+++ + GLG +T VFPKL+F ++ G+N + DPNYDIKQLA+ C Sbjct: 319 LGTSWLEREIQKAVFAVQEKGLGAEGRTPVFPKLIFTLKRGVNLEPTDPNYDIKQLAVRC 378 Query: 357 ASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENE-NGEQIHDGRNNLGVISLNLPR 415 A+KRMYPD++ YD +VK+TGS+KT MGCRS L + N GEQ GR NLGV++LNLPR Sbjct: 379 ATKRMYPDVVLYDNIVKITGSYKTAMGCRSHLSAYVNPQTGEQETVGRMNLGVVTLNLPR 438 Query: 416 IALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNAD-D 474 IALE++GD FW+LLD RL + +AL R AR+ APILY G + D D Sbjct: 439 IALESRGDTEEFWRLLDGRLEICHEALRFREARVRQAVPENAPILYKSGGFARLEDGDND 498 Query: 475 DVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEE 534 + +F NGRA++SLGYIG++E FG NEQ + I ++ ++ D W Sbjct: 499 GLGRLFDNGRATLSLGYIGLYEVATVFFGR-RWETNEQAKQFTIDVLAHMKSKCDAWNAA 557 Query: 535 T---------GYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG----YYTNSFHLDV 581 G S+YSTPSE+L DRF ++D FGVVP VTDKG YY NSFHLD Sbjct: 558 DFSGTGGKVAGASISVYSTPSESLTDRFAKMDRERFGVVPDVTDKGSGRTYYVNSFHLDP 617 Query: 582 EKKVN----PYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH-VPYYG 636 P+ K+DFEAPY P +GGFI Y E+PN+++N KA+E VWDY+Y H + Y G Sbjct: 618 RLGEADGWGPFRKLDFEAPYAPYTSGGFIHYTEWPNVRNNPKAVEAVWDYAYDHDIGYMG 677 Query: 637 TNTPIDECYECGFTGEFECTSKGFTCPKCGNH-------DASRVSVTRRVCGYLGSPDAR 689 N PID C+ CG+ G+F ++GFTCP CGN D V V RRVCGYL P AR Sbjct: 678 VNVPIDRCFRCGYEGDFVAANEGFTCPVCGNTGRIENGDDPDSVEVIRRVCGYLSEPVAR 737 Query: 690 PFNAGKQEEVKRRVKHLGNGQ 710 G+Q E+ RV H Sbjct: 738 GVARGRQHELADRVNHTAGSN 758 >UniRef50_A4J2C9 Ribonucleoside-triphosphate reductase class III catalytic subunit n=7 Tax=Bacteria RepID=A4J2C9_DESRM Length = 676 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 238/721 (33%), Positives = 368/721 (51%), Gaps = 54/721 (7%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ---GRNQVD 57 M V KRDG +V F +I EAI RAAKA +D + V + ++ N Sbjct: 1 MFTKVRKRDGREVAFNETKITEAIFRAAKAVGGEDRQTAMELTLDVLKMLKKQYNGNLFG 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 + E+Q VE L+ + + A+AYI YR R R+ R L + ++ +T+ EN Sbjct: 61 VEEVQDMVEKVLIESGHARTAKAYILYRAQRTRLRDARSDLMDAVEEILGETS----REN 116 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 AN S + +A +K Y L+P ++ QAH RGD+H HDLD+ + C+ Sbjct: 117 ANV-SNSPSAKMLQIASAASKKYYLTRLIPEEMSQAHARGDLHIHDLDF--YGKTLTCIQ 173 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 I L +L +GF G+ I PK ++ATA+ A I+ + ++GG + D +APFV Sbjct: 174 IPLGRLLKEGFNTGHGYIRAPKRPTSATALAAIILQSSQNDMHGGQSFAFFDRDIAPFVE 233 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLH-TANGQTPFVTFGFG 296 + + +E Y A ++L Y +N++H A Q PF + G Sbjct: 234 NA-----------------------SEEETYQAMEALIYNLNSMHSRAGAQVPFSSLNLG 270 Query: 297 LGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALEC 356 TS +R++ +++L AGLG+ + +FP ++F +++G+N GDPNYD+ QLA+ Sbjct: 271 TETSEAARMVIKNLLLAYEAGLGRG-ENPIFPNIIFKLKEGINLNPGDPNYDLFQLAIRV 329 Query: 357 ASKRMYPDILNYDQVVKVT-GSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPR 415 +SKR+ P D G MGCR+ V N G + DGR NL ++NLPR Sbjct: 330 SSKRLNPTFSFMDSSFNKEYGDQVGYMGCRTR--VMANRKGPAVTDGRGNLSFTTINLPR 387 Query: 416 IALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVRLNAD 473 IA++A+ + F++LLDE L ++ + L R +K + P + +G LN + Sbjct: 388 IAIKAERNIDKFYRLLDETLDMSFRQLYHRFTVQAKLKVKDMPFVMGQGLYLGSQGLNPN 447 Query: 474 DDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKE 533 D + E+ K+G ++S G+IG+ E + AL G H +E+ + G+ IV +RQ +D+ E Sbjct: 448 DTLEEVIKHG--TLSPGFIGLAEALVALNGQHHGQ-SEETQKLGLEIVSYMRQKIDEASE 504 Query: 534 ETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDF 593 + ++L +TP+E++ RF +LD EFG++PGVTDK YYTNSFH+ V + ++KI Sbjct: 505 KYDLNYTLLATPAESVSGRFAKLDRKEFGIIPGVTDKEYYTNSFHIPVGYPIGIFEKISL 564 Query: 594 EAPYPPLANGGFICYGEYPN-IQHNLKALEDVWDYS-YQHVPYYGTNTPIDECYECGFTG 651 E PY N G I Y E + HN +A+E + + + Y N P+D C C TG Sbjct: 565 EGPYHKYCNAGHISYVEMASPPLHNPQAVEAIIKHMQASDMGYAAINFPVDYCTSCSVTG 624 Query: 652 EFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQI 711 +CP+C + + RV RR+ GYL + D FN K E+ R H G Sbjct: 625 VI----NQDSCPRCESPEIRRV---RRITGYLSTVDR--FNDAKVAELNDRTTHSGFSPK 675 Query: 712 G 712 G Sbjct: 676 G 676 >UniRef50_B3RGP7 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Viruses RepID=B3RGP7_9CAUD Length = 707 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 305/714 (42%), Positives = 440/714 (61%), Gaps = 18/714 (2%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDAD---YCATVAAVVSEQMQ-GRNQVDI 58 V+KRDG + + ++ +A A + + + V VV+ + + + + Sbjct: 1 MKVVKRDGREEFYNGIKVIKAAESALLESGHTEEEAYRIACAVNEVVANNLPTDQCTISV 60 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 I VE+ LM K AR YI+YR RD RE G+L +I G +++T ENA Sbjct: 61 KNIHILVEDALMDMGLKCAAREYIQYRQTRDNNREAGGKLLADISGFLDRTCDEFTKENA 120 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 K + + T RDLLAGI++KH A +LP V + H RG IH HDLDY P+ NC L+ Sbjct: 121 IKPTIHVHTHRDLLAGILSKHLASTQILPDRVSEEHNRGFIHVHDLDYL-ISPLTNCCLV 179 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 + ML GF +GNA + PKSI AT + +QI + VAS YGG T++ ID LA + A Sbjct: 180 NYPDMLENGFNIGNAHVSKPKSIGVATTILSQISSAVASAQYGGQTMSHIDHYLAQYAEA 239 Query: 239 SYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLG 298 +Y K+ K +E +PDAE A T K+ +D+ Q+L Y++NTL + NGQTPF+T GL Sbjct: 240 TYEKNLKFCQEHWLPDAETVAMQMTDKDVFDSMQTLLYQINTLTSVNGQTPFITLSLGLD 299 Query: 299 TSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECAS 358 TS R+I ++ L+ GLG+ R T VFPK++F + +G+N GDPNYD+K+LALEC++ Sbjct: 300 TSVFGRMITKNYLKVHKMGLGEERITPVFPKVLFFLEEGVNMNPGDPNYDLKRLALECSA 359 Query: 359 KRMYPDILNYDQVVKVTGSF---KTPMGCRSFLGVWEN-ENGEQIHDGRNNLGVISLNLP 414 +R+YPD ++ KVTGS T MGCRSFL + + E GE+ + GR NLGV+SLNLP Sbjct: 360 ERIYPDFVSVPLNRKVTGSTDGKVTSMGCRSFLSKYNDLETGEEKYLGRFNLGVVSLNLP 419 Query: 415 RIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADD 474 IA +AK + F+ +LDE L LA +A + R+ RL+G KA PI++ EGA RL+ ++ Sbjct: 420 MIAAKAKTEGVDFFAVLDEYLDLAYEAHLVRVNRLKGTKAGQNPIMWCEGALA-RLDPEE 478 Query: 475 DVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEE 534 + ++F +G ASIS+GYIG++ET L E +A + I++ +R A +++K+E Sbjct: 479 SIDKLFYDGYASISIGYIGVYETCQIL-------GREGDKALALGILQHMRDACERYKKE 531 Query: 535 TGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFE 594 + FSLY TPSE+LC + E+ V + Y TNSFH V +P+DK ++E Sbjct: 532 SRLAFSLYGTPSESLCYKAATCLDREYPEVLK-HEHEYLTNSFHQPVWINSSPFDKWEYE 590 Query: 595 APYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFE 654 + +++GG I Y E PN+++NL ALE + D+ Y+H+ Y+G N P+D+C +CGF+GEF Sbjct: 591 EGFAMISSGGNIGYVETPNLKNNLDALEALVDFGYKHIMYFGINQPVDKCLKCGFSGEFS 650 Query: 655 CTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGN 708 T+KGF CP+CGNH+ +SV RRV GYL SP++RP+N GKQ EV RVKH G+ Sbjct: 651 ATAKGFVCPECGNHEEGTISVIRRVSGYLSSPNSRPYNKGKQAEVIERVKHYGS 704 >UniRef50_C2BIL8 Possible ribonucleoside-triphosphate reductase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BIL8_9FIRM Length = 706 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 266/716 (37%), Positives = 415/716 (57%), Gaps = 23/716 (3%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKA-AEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V+KRDG KV F ++I AI +A + + + A +A+ + E+ + + ++ I EI Sbjct: 2 LQVIKRDGTKVDFNKDKITIAIEKAMHSPSGIYVEGQAAEIASEIEERSKNKREISIYEI 61 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 + V +L+ A++Y Y+ + +RE+ + EI GL+ QTN +++EN+NK+ Sbjct: 62 EDLVYYKLIDRKNPATAKSYESYKSVQAYKREQ-NTSDDEIIGLLNQTNIDVMDENSNKN 120 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 + TQRDL+AG VAK A++ L+P D+V+AH+ G IH HDLDY P+FNC L+D+K Sbjct: 121 PIIASTQRDLIAGEVAKDIAKRKLIPLDLVEAHDSGAIHIHDLDYL-IQPIFNCCLVDMK 179 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 ML G + IE PKS A V QIIAQ+AS+ YGG +IN L+P++ S+ Sbjct: 180 DMLDNGTVVNEKMIESPKSFQVACNVMTQIIAQIASNQYGGQSIN--IACLSPYLEKSFE 237 Query: 242 KHRKTAEEWNIPD--AEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT 299 K+ K A E D A+ A++ T ++ Q+++Y++NTL T+NGQ+PFVT Sbjct: 238 KNLKLASEILKDDDQAKKMADALTQRDLESGIQTIQYQINTLMTSNGQSPFVTLFMHTDE 297 Query: 300 SW----ESRLIQESILRNRIAG---LGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQL 352 + ++ I + IL+ RI G T FPKL++ + + N +D+ +L Sbjct: 298 NDPYLDQTVEIIKEILKQRIQGIKNDQGVYVTPAFPKLIYVLDEN-NINPDSKYFDLTRL 356 Query: 353 ALECASKRMYPDILNYDQVV-KVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISL 411 A +C +KRMYPD ++ ++ G+ PMGCR+FL ++++ GE DGR N+GV ++ Sbjct: 357 AAKCTAKRMYPDYISAKKMRENYEGNVFAPMGCRAFLPPYKDKYGEYKFDGRFNMGVCTI 416 Query: 412 NLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLN 471 NLP+I + A GDE F+++L++RL L ++ + R L V + +PI + GA RL Sbjct: 417 NLPQIGILAHGDEKLFFEILEKRLDLVKRVGILRYDHLAKVTSDSSPIHFQHGAIA-RLK 475 Query: 472 ADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQW 531 + + + +NG A++++GYIGI+E G H ++ + I+E L +W Sbjct: 476 KHESIKPLLENGYATVTIGYIGIYEATKLTIGESH--TTKRGHDFAMKIMEMLNDKKKEW 533 Query: 532 KEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKI 591 EE G F++Y TP+E+L RF +D FG + VTDKGYYTNSFH+DV + ++ +DK Sbjct: 534 SEEYGIAFAVYGTPAESLTHRFASIDRERFGDIKDVTDKGYYTNSFHVDVRENISVFDKF 593 Query: 592 DFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTG 651 DFE+ + L+ GG I Y E PN+ +N++A+ + +Y Y H+ Y NT D C CG+ G Sbjct: 594 DFESEFQKLSTGGCISYAEIPNMTNNIEAVLTMIEYIYDHIQYAEFNTKSDYCGNCGYDG 653 Query: 652 EFECTS-KGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 E + CP CGNHD + ++V RR CGYLG +N G+ +E+K RV H+ Sbjct: 654 EILLDDNNQWYCPNCGNHDRATLTVVRRTCGYLG---ENFWNEGRTKEIKARVLHI 706 >UniRef50_B1BE54 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BE54_CLOBO Length = 705 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 299/713 (41%), Positives = 437/713 (61%), Gaps = 16/713 (2%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAA-EVDDADYCATVAAVVSEQMQGRNQVDIN 59 M V+KRDG +V F RI AI A K + + D +A +SE ++++ + Sbjct: 1 MIKTVIKRDGREVEFNINRIVNAIELAMKDTKQGIEKDLSVHIANDISEI--NKDKITVE 58 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 EIQ VE++LM K +A+ YI+YR++R R+ + + ++++ + + +NAN Sbjct: 59 EIQDLVEDKLMDSR-KDVAKEYIKYRNERTKARDSKSNVFEKMQDTFDMKSEDN-RDNAN 116 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 K + T R ++A I + +AR +P +++ H++ I+ HD +Y P FNC+LI+ Sbjct: 117 KAGDKLQTYRAMIADIACREFARTKTIPEKILKEHKK-TIYNHDENYMCL-PFFNCILIN 174 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 + ML GFK+G IE PKSI+TA A+ +QI+A V+S+ YGG T+ IDE L + S Sbjct: 175 YRDMLK-GFKVGMTPIETPKSITTAIAILSQIVAHVSSNCYGGNTLAEIDEGLEIYAKRS 233 Query: 240 YNKHRKTAEEWNIPDAEGYANSRT--IKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGL 297 Y KH +T +W + + KE YDA Q EYE+ TL + G+ PF+T FG Sbjct: 234 YKKHFRTGMKWLKNKKKAKKYAWEKLEKEVYDACQGFEYEIQTLTNSRGEVPFLTITFGK 293 Query: 298 GTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECA 357 G RLIQES L+ RI GL T VFPK+ F ++ GLN + DP YDI QLAL+C Sbjct: 294 GRGKFCRLIQESYLKVRIDGLT-GGITPVFPKICFILKRGLNLEPQDPQYDIYQLALKCT 352 Query: 358 SKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIA 417 SKR+YPD L YD+VV++TG FK+PM CRSFL +++ENG DGR N GV S+NL R+A Sbjct: 353 SKRIYPDYLMYDRVVEITGDFKSPMSCRSFLSTYKDENGHIKTDGRFNQGVCSINLVRLA 412 Query: 418 LEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVS 477 +++KGDE F++LL L L ++ALM R L+G+KA+ APILYM GA RLN +D + Sbjct: 413 IQSKGDENKFFELLHNALDLTKEALMFRHNMLKGIKAKQAPILYMNGAVA-RLNPEDAID 471 Query: 478 EIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGY 537 ++ N +SIS+GY+G+H + AL+G + Y++E++ KG I++ LR D+ K+ET Sbjct: 472 KLLYNNYSSISIGYVGLHNCMVALYGKSY-YESEEMLQKGAKIMQYLRDYCDEAKKETTI 530 Query: 538 GFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPY 597 GFSLYSTP+E L +FC+ D +FG++ GV D+GYY NSFH K + P++KID E+ Y Sbjct: 531 GFSLYSTPAETLATKFCKEDVKDFGLIEGVNDQGYYENSFHYPSNKDITPFEKIDLESHY 590 Query: 598 PPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFEC-- 655 +A+GG I Y E+ N+++NL+ALE + Y+Y Y+G N D C +CG+ G Sbjct: 591 SKIASGGAIQYVEFGNMENNLEALEKIVTYAYDKCHYFGVNVRPDRCLKCGYKGVINPQH 650 Query: 656 -TSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLG 707 T + CP+CGN D +++ R+CGY+GS RP K +E+ RV H G Sbjct: 651 ETENDYICPQCGNTDPLTMNICIRLCGYIGSLSERPTIDNKMKEMHNRVVHCG 703 >UniRef50_C8NQX8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Corynebacterium efficiens RepID=C8NQX8_COREF Length = 728 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 282/717 (39%), Positives = 410/717 (57%), Gaps = 21/717 (2%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V+K+DG V ++ +I ++ A + + + ++ ++ + + ++ Sbjct: 18 VLKKDGRVVDYRPRKILNSLEAAERTSGEPLHAPSDQLLGEITRRVAEHHIISTEDLSRL 77 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKV 124 VE L + AY +Y+ ++ + + I G+VE +A +L EN NKD++ Sbjct: 78 VEQTLAQS--PAVLAAYRDYQRRQEEKINSSTDITHAITGVVE-GDAKILAENGNKDART 134 Query: 125 IPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGML 184 TQR++LAG V+K Q +LP D+ +AH +G IH HDLD SPF M NC L D +L Sbjct: 135 FTTQREILAGAVSKAKGLQ-MLPEDIRRAHLKGLIHVHDLDRSPFAAMPNCSLPDFDYLL 193 Query: 185 TQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHR 244 + GF +GNA IEPP+SI A + Q++ ++ YGG +I+ ID +L P+ + K+R Sbjct: 194 SHGFTLGNARIEPPRSIGVAATLLVQLLGAISGEQYGGISIHEIDRLLEPYAELTLQKNR 253 Query: 245 K------------TAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT 292 + +A + E A +T K+ +DA Q+ EY+VNTL TA QTPF + Sbjct: 254 RLYSDASGLLCSDSATDAQDDLVEELARRKTAKDIFDAMQAFEYQVNTLTTAAAQTPFTS 313 Query: 293 FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQL 352 G+ TSW R IQ+SIL R G+ +TA+FPK++F + +G+NH GDPNYDIK Sbjct: 314 ISLGMTTSWCGREIQKSILAVRENGMS--GETAIFPKIIFFVDEGVNHAPGDPNYDIKMA 371 Query: 353 ALECASKRMYPDILNYDQVVK-VTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISL 411 A+ C+ +R+YPD+++ ++ + G TPMGCRSFL W+N +G+ GRNNLGV+S+ Sbjct: 372 AMRCSMRRIYPDLVSVPRIRELKQGQLITPMGCRSFLHPWKNSDGDYELLGRNNLGVVSI 431 Query: 412 NLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLN 471 NLPRIA+ A+ F+ LDE + L +AL R + API+Y +G G Sbjct: 432 NLPRIAIAAQQSVDDFFTGLDEAIDLGVRALRIREEVVLSADLEQAPIMYTQGGMGNPAG 491 Query: 472 ADDDVSEIF--KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVD 529 + R+SISLGY GIH + AL G EH + RA I+E + V Sbjct: 492 KTSVRDFYTGDNHKRSSISLGYTGIHNAMVALTGEEHWHTVAGHRALSHRILEHMNTRVV 551 Query: 530 QWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYD 589 +++ S+Y+TPSE+LCDRF LD FG +PG+ D+ YY NSFH NP D Sbjct: 552 AVQDQFHATVSVYATPSESLCDRFAELDRDRFGELPGINDRDYYENSFHFPSYLHTNPMD 611 Query: 590 KIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGF 649 KI FEA Y PL GGF+ Y E PN+ N A E +WD ++ HV Y+G N+P+D C CGF Sbjct: 612 KIHFEAQYMPLTPGGFMYYVEAPNLLVNPMAFESIWDEAFDHVGYFGINSPVDHCLVCGF 671 Query: 650 TGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 GEF C +G+TCP C N D ++ SVTRR+CGYLG+P RP +G+Q E+ R+KH+ Sbjct: 672 EGEFHCDEQGYTCPGCSNRDETQASVTRRLCGYLGAPMKRPVVSGRQAEINSRIKHM 728 >UniRef50_B2A3V1 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Clostridia RepID=B2A3V1_NATTJ Length = 736 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 234/731 (32%), Positives = 364/731 (49%), Gaps = 44/731 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDI 58 M V+KRDG + PF +I AI +A KA + +D ++ V ++ G ++ + Sbjct: 15 MPTKVVKRDGREQPFDPSKITNAIKKALKAIDKEDHSLALSLTYQVINKLTKHGVDKPTV 74 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 +IQ VEN LM + ++ARAY+ YR+DRD RE +L +E+ ++E + ENA Sbjct: 75 PQIQEMVENSLMDTGHYEVARAYVIYRNDRDRIREADTKLMKELLKVLETRDQ----ENA 130 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 N + + K H + QAH G IH HD D++ C+ I Sbjct: 131 NVNGDAPMGKMLKGGSEAMKEVYLNHFAKNEHSQAHRNGYIHIHDADFAAIG-TTTCLQI 189 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 L +L +GF G+ I PKSI +A +++ + + +GG + D LAP+V Sbjct: 190 PLDRLLAEGFNTGHGWITTPKSIESAASLSCIVFQSNQNDQHGGQSFATFDSSLAPYVKI 249 Query: 239 SYNKHRKTAEEWNI-PDAEGYANSRTIKECYDAFQSLEYEVNTLH-TANGQTPFVTFGFG 296 +++K + + I + + A + K Y A Q + +NT+H A Q PF + FG Sbjct: 250 TFDKIKNELSQLGISENIDDKAWEQVKKRTYQAMQIFVFNLNTMHSRAGAQVPFTSVNFG 309 Query: 297 LGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALEC 356 L TS RLI E +L+ GLG+ +T +FP L+F++ G+N + GDPNYD+++LA E Sbjct: 310 LDTSPWGRLISEMLLKVYKKGLGRG-ETPIFPNLIFSLATGVNKEPGDPNYDLRRLAHEV 368 Query: 357 ASKRMYPDILNYDQVVKVTGSFK-------TPMGCRSFLGVWENENGEQIHDGRNNLGVI 409 + +R++P+ N D ++ MGCR+ V N G ++ +GR NL Sbjct: 369 SCERLFPNYSNQDASYNAPFYYREEDPQVVAYMGCRTR--VISNRRGPEVTEGRGNLSFT 426 Query: 410 SLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--G 467 S+NLPRIALE + F++ L++ + L L R + KA+ P L +G Sbjct: 427 SINLPRIALETSC-PSDFYQRLEDTIWLVADQLYDRFKIQKNKKAKEFPFLMGQGLYMDS 485 Query: 468 VRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQA 527 +++ + E K+G ++S+G+IG+ E + A+ G H ++E+ KG+ IVE + Sbjct: 486 EDFESEETLEEALKHG--TLSIGFIGLAEALKAMIGEHHG-ESEEAFKKGLQIVEFMDNI 542 Query: 528 VDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNP 587 + E+ FSL +TP+E L RF LD FG + GVTDK +YTNSFH+ VE ++ Sbjct: 543 CKKASEQYNLNFSLLATPAEGLSGRFTELDRETFGEIEGVTDKEWYTNSFHIPVEYSISA 602 Query: 588 YDKIDFEAPYPPLANGGFICYGEYP-NIQHNLKALEDVWDYSYQH-VPYYGTNTPIDECY 645 Y+KI E+ + G I Y E + N+ A E + + + + Y+ N P+D+C Sbjct: 603 YEKIRKESAFNKYTPAGHINYVELDAAPKGNIDAFEQLVNAAMDNDCGYFSVNFPVDQCL 662 Query: 646 ECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDA----------RPFNAGK 695 C G TCP CG+ R+ RRV GYLG + FN GK Sbjct: 663 NCANNGVI----DSETCPVCGSR---RIQRVRRVTGYLGVLEEIPDEEGEGKTSGFNDGK 715 Query: 696 QEEVKRRVKHL 706 E RV HL Sbjct: 716 YHECLNRVSHL 726 >UniRef50_A9KQ95 Anaerobic ribonucleoside-triphosphate reductase n=16 Tax=Bacteria RepID=A9KQ95_CLOPH Length = 708 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 274/719 (38%), Positives = 416/719 (57%), Gaps = 26/719 (3%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATV-AAVVSEQMQGRNQVDINEI 61 V+KRDG + +I AI +A + + + A ++ + ++ + + EI Sbjct: 1 MKVVKRDGRVTDYDRNKILVAIRKANDEVDPKEKITEDKIEAIILGIEHLKKDTMYVEEI 60 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 Q +E +LM+ LA+ YI YR R++ R+ ++ I L+ +N ++ EN+NK+ Sbjct: 61 QDMIEQKLMAERKFVLAKTYIIYRFRRELVRKA-NTTDESIMSLIRHSNEDVMEENSNKN 119 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 + + TQRDL+AG V+K ++ LLP + +AHE G +H+HD DY +FNC LI++K Sbjct: 120 AVIASTQRDLIAGEVSKDLTKRLLLPEKITKAHEEGILHFHDADYF-LQSIFNCCLINIK 178 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 ML G M IE PKS A V QII+ VAS YGG +++ L ++ S + Sbjct: 179 DMLENGTVMNAKLIESPKSFQVACTVMTQIISAVASSQYGGQSVD--IRHLGKYLRHSMD 236 Query: 242 KHRKTAEEWNIPDA-----EGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFG 296 K+RK E +A E + R E Q+++Y++NTL T NGQ+PFVT Sbjct: 237 KYRKRYESLFNGEASEEVIEKFVQERVQDELRSGVQTIQYQINTLMTTNGQSPFVTLFLN 296 Query: 297 LGTSWE----SRLIQESILRNRIAGLGKNR---KTAVFPKLVFAIRDGLNHKKGDPNYDI 349 L E + +I E ILR R+ G+ + T FPKL++ + + N KG I Sbjct: 297 LDKDDEYIEENAMIIEEILRQRLEGIKNEKGVYITPAFPKLIYVLDEH-NCLKGGKYDYI 355 Query: 350 KQLALECASKRMYPDILNYDQVV-KVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGV 408 +LA++C++KR+YPD ++ ++ G+ + MGCRSFL W++ENG+ +GR N GV Sbjct: 356 TKLAVKCSAKRLYPDYISAKKMRENYEGNVFSCMGCRSFLSPWKDENGDYKFEGRFNQGV 415 Query: 409 ISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGV 468 +SLNLP+I + A GDE FW+LL+ERL L +ALM R LEG + V+PI + GA Sbjct: 416 VSLNLPQIGIIANGDEEIFWQLLEERLALCFEALMCRHRALEGTISDVSPIHWQYGAIA- 474 Query: 469 RLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAV 528 RL + + ++ NG ++ISLGYIG++E + G H ++ + I+ RL+ A Sbjct: 475 RLKKGETIDKLLHNGYSTISLGYIGLYEVTKLMKGVSH--TQKEGTEFALRIMNRLKDAA 532 Query: 529 DQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPY 588 D WK+ETG GF LY TP+E+LC RF R+D FG + +TDKGYYTNS+H+DV + ++ + Sbjct: 533 DTWKKETGIGFGLYGTPAESLCYRFARIDKERFGDIKDITDKGYYTNSYHVDVREDIDAF 592 Query: 589 DKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECG 648 K FE+ + +++GG I Y E PN++HNL+ALE++ + Y ++ Y NT D C+ CG Sbjct: 593 SKFTFESQFQVISSGGAISYIEVPNMRHNLEALEEIVKFIYDNIQYAEFNTKSDYCHVCG 652 Query: 649 FTGEFECTSK-GFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 F GE + + CP CGN D ++++VTRR CGYLG +N GK +E+ RV H+ Sbjct: 653 FDGEIKINEDFEWECPNCGNKDHAKMNVTRRTCGYLG---ENFWNKGKTKEINARVLHI 708 >UniRef50_C7MM33 Anaerobic ribonucleoside-triphosphate reductase n=17 Tax=Bacteria RepID=C7MM33_CRYCD Length = 740 Score = 647 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 260/751 (34%), Positives = 394/751 (52%), Gaps = 58/751 (7%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATV----AAVVSEQMQGRNQVDI 58 V+KR+G +V F +I AI +A + ++ A + V +E + + Sbjct: 1 MKVIKRNGSEVIFDVTKIVNAIAKANEEVVPENRLSQAQILTAANNVTTECEACGHAPAV 60 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 EIQ VE+Q+M+ ++AR YI YR+ ++ +R + +I L+E N + EN+ Sbjct: 61 EEIQDMVEDQIMALGCFEVARKYIIYRYLQNQKR-ASNTTDDKILSLIECNNEEVKQENS 119 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 NK+ V+ QRD +AG V+K A + LLP+DVV AHE G IH+HD DY M NC L+ Sbjct: 120 NKNPAVVSVQRDYMAGEVSKDLASRMLLPQDVVWAHENGLIHFHDSDYYAQR-MHNCDLV 178 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 +L+ ML G + IE P S STA + QIIAQVAS YGG +I+ LAPFV Sbjct: 179 NLEDMLQNGTVISGTLIEKPHSFSTACNIATQIIAQVASCQYGGQSIS--LAHLAPFVDI 236 Query: 239 SYNKHRK--------TAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF 290 S K R+ E + +R E Q+++Y+V TL T NGQ PF Sbjct: 237 SRQKIRRAVIAELNDLGLEATGDRLDTVVEARVRDEIRRGVQTIQYQVVTLMTTNGQAPF 296 Query: 291 VTFGFGLGTSW------ESRLIQESILRNRIAGLGKNR---KTAVFPKLVFAIRDGLNHK 341 +T L + + + E +LR R G+ T FPKL++ + D N + Sbjct: 297 ITVFMYLNEARNEQEKHDLAMCIEEMLRQRHQGVKNEAGVWITPAFPKLIYVLEDD-NIE 355 Query: 342 KGDPNYDIKQLALECASKRMYPDILNYDQVVKV---------TGSFKTPMGCRSFLGVWE 392 P Y + Q+A +C ++R+ PD ++ ++ + G T MGCRSFL Sbjct: 356 ADSPYYYLTQMAAKCTARRLVPDYISEKKMKEYKLSAGEEAGNGDCYTCMGCRSFLTPDR 415 Query: 393 NENGE-------------QIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLAR 439 + NG + GR N GV+++NL +AL ++GD FW++ DERL L Sbjct: 416 SGNGYNNVANVANWDPTKPKYYGRFNQGVVTINLVDVALSSEGDINKFWEVFDERLELCH 475 Query: 440 KALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETIN 499 KAL+ R RL+G + APIL+ GA RL + + ++ G ++ISLGY G++E Sbjct: 476 KALLCRHNRLKGTLSDAAPILWQYGALA-RLEKGETIDKLLYGGYSTISLGYAGLYECTK 534 Query: 500 ALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTA 559 + G H N + + +++ + + WKEE FSLY TP E+ +F + Sbjct: 535 YMTGKSH--TNPEATPFALEVMQHMNDKCNTWKEEHDIDFSLYGTPLESTTYKFSKCLQR 592 Query: 560 EFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLK 619 FG++ G+TDKGY TNS+H+ V ++++ ++K+ FE+ + PL+ GG I Y E P++Q NL+ Sbjct: 593 RFGIIEGITDKGYITNSYHVHVAEEIDAFNKLKFESQFQPLSPGGAISYVEVPDMQDNLE 652 Query: 620 ALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKG----FTCPKCGNHDASRVSV 675 A+ V Y Y ++ Y NT D C CGF GE + CP CGN D ++++V Sbjct: 653 AVMKVLHYIYDNIMYAELNTKSDYCQVCGFDGEITIIEDDGKLVWECPHCGNRDQTKLNV 712 Query: 676 TRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 RR CGY+G+ + +N G+ +E+K RV HL Sbjct: 713 ARRTCGYIGT---QFWNQGRTQEIKDRVLHL 740 >UniRef50_D0WIV3 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Bacteria RepID=D0WIV3_9ACTN Length = 740 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 257/751 (34%), Positives = 391/751 (52%), Gaps = 58/751 (7%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVA----AVVSEQMQGRNQVDI 58 ++KR+G +V F +I+ AI A ++ V + + V + Sbjct: 1 MKIIKRNGSEVEFDISKIENAITAANAEVPAAQRLTDRQISYASQNVADACAEAGHAVSV 60 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 EIQ VE+++M ++AR YI YR+ + ++R+K + +I L+E N + EN+ Sbjct: 61 EEIQDLVEDEIMKLDRFEVARKYIIYRYVQGLKRQK-NTTDDKIMALIECNNEEVKQENS 119 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 NK+ V QRD +AG V+K A + LLP+DVV AH G IH+HD DY M NC L+ Sbjct: 120 NKNPSVNSVQRDYMAGEVSKDLAMRVLLPKDVVTAHNEGVIHFHDSDYYAQH-MHNCDLV 178 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 +L+ ML G + IE P S STA + QIIAQVAS YGG +I+ LAPFV Sbjct: 179 NLEDMLQNGTVISGTLIEKPHSFSTACNIATQIIAQVASSQYGGQSIS--LTHLAPFVDV 236 Query: 239 SYNKHRKTAE--------EWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF 290 S + R+ E + R E Q+++Y+V TL T NGQ PF Sbjct: 237 SRQRIRREVLDEINTLGFESSPERVSEVVEKRLRDEIRRGVQTIQYQVVTLMTTNGQAPF 296 Query: 291 VTFGFGLGTSWE------SRLIQESILRNRIAGLGKNR---KTAVFPKLVFAIRDGLNHK 341 VT L + + +I E L R G+ T FPKL++ + + N Sbjct: 297 VTVFMYLNEAKDEAEKHDLAMIIEETLAQRYQGVKNEEGIWITPAFPKLIYVLEED-NVS 355 Query: 342 KGDPNYDIKQLALECASKRMYPDILNYDQVVKV---------TGSFKTPMGCRSFLGVWE 392 +G P + + Q+A +C ++R+ PD ++ ++ ++ G T MGCRSFL Sbjct: 356 EGSPYFYLTQMAAKCTARRLVPDYISEKKMRELKLSKGEVEGDGDCYTCMGCRSFLTPDR 415 Query: 393 NENGEQ-------------IHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLAR 439 + NG + GR N GV+++NLP +AL ++GD FW + +ERL L Sbjct: 416 SGNGYDNVANAGNYEPGTPKYYGRFNQGVVTINLPDVALSSRGDVDAFWDIFEERLELCH 475 Query: 440 KALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETIN 499 +AL R RL G + APIL+ GA RL + + ++ G +++SLGY G++E + Sbjct: 476 RALRARHDRLRGTLSDAAPILWQHGALA-RLEKGETIDKLLYGGYSTLSLGYAGLYECVK 534 Query: 500 ALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTA 559 L G H + +E+ A+++++ +WKE +SLY TP E+ +F + Sbjct: 535 YLTG--HSHTDEEATPFAKAVMQKMNDKCAEWKEAEDIDYSLYGTPLESTTYKFAKALQR 592 Query: 560 EFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLK 619 FGV+ G+TDKGY TNS+H+ V ++++ + K+ FE+ + L+ GG I Y E PN+Q NLK Sbjct: 593 RFGVIKGITDKGYITNSYHVHVAEEIDAFTKLKFESEFQRLSPGGAISYIEVPNMQDNLK 652 Query: 620 ALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKG----FTCPKCGNHDASRVSV 675 A+ V Y Y+++ Y NT D C CG+ GE + G + CP CGN D S ++V Sbjct: 653 AVVSVIQYIYENIMYAELNTKSDYCQCCGYDGEIKIVEDGGKLVWECPNCGNRDQSTMNV 712 Query: 676 TRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 RR CGY+G+ + +N G+ +E+K RV HL Sbjct: 713 ARRTCGYIGT---QYWNQGRTQEIKDRVLHL 740 >UniRef50_A6L0X1 Anaerobic ribonucleoside-triphosphate reductase n=24 Tax=Bacteria RepID=A6L0X1_BACV8 Length = 758 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 221/767 (28%), Positives = 359/767 (46%), Gaps = 83/767 (10%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDAD-YCATVAAVVSEQMQGRNQVDINEIQT 63 ++KRDG + F +IK AI +A A+ +D+ D A + V + + EIQ Sbjct: 8 IIKRDGKREDFSISKIKNAIGKAFHASGIDNEDKLIAEITMRVISNFVS-PTISVEEIQD 66 Query: 64 AVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSK 123 VE +LM ++A+ YI YR R+ ER+++ ++ + G+V + NAN S Sbjct: 67 LVEKELMKVR-PEVAKKYIIYREWRNTERDRKTQMKHIMDGIVAIDKNDVNLSNANMSSH 125 Query: 124 VIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGM 183 Q A V K Y ++LLP+ +AH+ GDIH HDLDY P C+ DL + Sbjct: 126 TPAGQMMTFASEVTKDYTYKYLLPKKYAEAHQLGDIHIHDLDYYPT-KTTTCIQYDLDDL 184 Query: 184 LTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKH 243 +GF+ N I P+SI + + I + +GG I D +A V ++ KH Sbjct: 185 FERGFRTKNGSIRTPQSIQSYATLATIIFQTNQNEQHGGQAIPAFDFFMAEGVRKTFRKH 244 Query: 244 RKTAEEWNIP------------DAEGYANSRTIKECYDAFQSLEYEVNTLHTANG-QTPF 290 KT E+ I E A + T K+ + A + + +NT+H+ G Q F Sbjct: 245 LKTLTEFYIEVEGKEPGTEALKKIEEKAYAMTRKDTHQAMEGFIHNLNTMHSRGGNQVVF 304 Query: 291 VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD------ 344 + +G TS E R++ E +L+ I GLG + VFP +F ++DG+++ + D Sbjct: 305 SSINYGTDTSPEGRMVIEELLKATIEGLGTRGEVPVFPIQIFKVKDGVSYSEEDYKKAME 364 Query: 345 --------------PNYDIKQLALECASKRMYPDILNYDQVVKVTGSF-----------K 379 PN+D+ A +K ++P+ + D + Sbjct: 365 NFEAALEGKMEFQAPNFDLFLKACRTTAKALFPNFMFLDTPYNKNEKWDIKDPKRYRYEL 424 Query: 380 TPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAK-----------------G 422 MGCR+ V+EN GE+ GR NL ++N+PR+A+EA+ Sbjct: 425 ATMGCRTR--VYENIAGEKSSLGRGNLSFTTMNMPRLAIEARIKAESLEESGKKEAIERK 482 Query: 423 DEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVRLNADDDVSEIF 480 + F + + L + L R AR P + G +L+ +D V ++ Sbjct: 483 AKEIFIESVHALSELIAEQLYARYQYQRTALARQFPFMMGNDVWKGGGKLSPNDQVGDVL 542 Query: 481 KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFS 540 + G ++ +G+IG H + AL+G H + + A+ E + + D++K++ FS Sbjct: 543 RQG--TLGIGFIGGHNAMMALYGEGHAHSQKAWDTLFEAVTE-MNKVADEYKQKYQLNFS 599 Query: 541 LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL 600 + +TP+E L RF R+D ++G++PGVTD YY NSFH+DV++ + +KI EAP+ + Sbjct: 600 VLATPAEGLSGRFTRMDRRKYGIIPGVTDNDYYVNSFHVDVKEPITITEKIKREAPFHAI 659 Query: 601 ANGGFICYGEY-PNIQHNLKALEDVWDYSY-QHVPYYGTNTPIDECYECGFTGEFECTSK 658 GG I Y E Q N+KA+ + + + + Y N P+D C CG+ G Sbjct: 660 TRGGHITYVELDGEAQKNVKAIAKIVKVMHDEGIGYGSINHPVDTCQACGYKGVIY---- 715 Query: 659 GFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 CP C + + R+ RR+ GYL D +N+ K+ E + RVKH Sbjct: 716 -DKCPVCQSENIMRM---RRITGYLTG-DLSTWNSAKRAEERDRVKH 757 >UniRef50_C4ZF10 Anaerobic ribonucleoside-triphosphate reductase n=29 Tax=Bacteria RepID=C4ZF10_EUBR3 Length = 746 Score = 635 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 272/746 (36%), Positives = 399/746 (53%), Gaps = 51/746 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAA---EVDDADYCATVAAVVSEQMQG-RNQVD 57 ++KR G + F + +I AI +A + E AD +A+ V + + Sbjct: 11 YMKIIKRSGSEDIFDAAKIVAAIRKANDSVLDYEKLTADQIEEIASNVETACENMKRSPS 70 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 + EIQ VENQLM+ +AR YI YR+ R I R K +Q+I L+E N + EN Sbjct: 71 VEEIQDMVENQLMNKRAFTVARNYITYRYKRAIVR-KSNSTDQQILSLLECNNEEVKQEN 129 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 +NK+ V QRD +AG V+K R+ LLP D+V+AHE+G IH+HD DY M NC L Sbjct: 130 SNKNPTVNSVQRDYMAGEVSKDITRRFLLPEDIVEAHEKGLIHFHDADYFAQH-MHNCCL 188 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 ++L+ ML G + I+ PKS STA + Q IAQ+AS YGG +I+ LAPFV Sbjct: 189 VNLEDMLQNGTVISETMIDTPKSFSTACNIATQAIAQIASSQYGGQSIS--LAHLAPFVQ 246 Query: 238 ASYNKHRKTAEEWNI--------PDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTP 289 S K RK ++ A R +E Q ++Y+V TL T NGQ P Sbjct: 247 VSREKFRKQVQKEFESVGLDLDEEKINEVAELRVKEEINRGVQMIQYQVITLMTTNGQAP 306 Query: 290 FVTFGFGLG------TSWESRLIQESILRNRIAGLGKNR---KTAVFPKLVFAIRDGLNH 340 F+T L T + I E +L RI G+ + T FPKL++ + D N Sbjct: 307 FITVFMYLNEVSDPQTKADLAAIIEEMLHQRIKGVKNEKGVYITPAFPKLIYVLEDD-NI 365 Query: 341 KKGDPNYDIKQLALECASKRMYPDILNYDQVVK-VTGSFKTPMGCRSFLGVWENEN---- 395 + +++ LA +C++KRM PD ++ + + G T MGCRSFL V Sbjct: 366 TEDSKYWNLTVLAAQCSAKRMVPDYISEKVMKELKDGDVYTCMGCRSFLTVDRCSQTAGN 425 Query: 396 ---------GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRI 446 ++ + GR N GV++LNL +A ++ DE FWK+LDERL L +ALM R Sbjct: 426 VAHAENFDPNKRKYYGRFNQGVVTLNLVDVACSSEKDEEKFWKILDERLELCHRALMCRH 485 Query: 447 ARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEH 506 RL G K+ VAPIL+ GA RL + + + NG ++ISLGY G+ E + + G H Sbjct: 486 KRLLGTKSDVAPILWQNGALA-RLKKGEVIDPLLFNGYSTISLGYAGLCECVRYMKGVSH 544 Query: 507 VYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPG 566 + ++ + +++RL A +QWK+E+ FS+Y TP E+ +F + FG++ G Sbjct: 545 -TEPKEGTPFALKVMQRLNDACEQWKKESNIDFSIYGTPLESTTYKFAKCLQKRFGIIKG 603 Query: 567 VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWD 626 VTDK Y TNS+H+ V +++N +DK+ FE+ + L+ GG I Y E PN+Q N+ A+ V Sbjct: 604 VTDKNYITNSYHVHVTEQINAFDKLKFESQFQKLSPGGAISYVEVPNMQDNIPAVLSVMQ 663 Query: 627 YSYQHVPYYGTNTPIDECYECGFTGEFECTSKG------FTCPKCGNHDASRVSVTRRVC 680 Y Y ++ Y NT D C CG+ GE + + + CP CGN D +++SV RR C Sbjct: 664 YIYDNIMYAELNTKSDYCQVCGYDGEIKIVEEEGSGKLIWECPHCGNRDQNKMSVARRTC 723 Query: 681 GYLGSPDARPFNAGKQEEVKRRVKHL 706 GY+G+ + +N G+ +E+K RV HL Sbjct: 724 GYIGT---QFWNQGRTQEIKERVLHL 746 >UniRef50_A6LHE5 Anaerobic ribonucleoside-triphosphate reductase n=20 Tax=Bacteria RepID=A6LHE5_PARD8 Length = 735 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 214/752 (28%), Positives = 351/752 (46%), Gaps = 65/752 (8%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAA-KAAEVDDADYCATVAAVVSEQMQGRNQVDIN 59 M V+KRDG V F E+I AI +A + +D + + +G Q+ + Sbjct: 1 MIQTVVKRDGRIVGFNEEKIVTAIRKAMLHTDKGEDMQLIRQITDHI--SFKGEPQMTVE 58 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 IQ AVE +LM+ K +A+ YI YR+ R + R+ + R ++ + + ENAN Sbjct: 59 AIQDAVELELMASSRKDVAQKYIAYRNQRSVARKAKTR--DMFLEIINIKSNDITRENAN 116 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 ++ + K + +LL +V +A +H HD DY P C+ Sbjct: 117 MNADTPAGMMMKFSSETTKPFVDDYLLSEEVKEAVSNNYLHIHDKDYYPT-KSLTCVQHP 175 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 L +L GF G+ E P K I TA+ + + + ++GG I D LAP+V S Sbjct: 176 LDRILKYGFSAGHGESRPAKRIETASILGCISLETAQNEMHGGQAIPAFDFYLAPYVRNS 235 Query: 240 YNKHRKTAEEWNIPDAE-------------------------GYANSRTIKECYDAFQSL 274 + + KT E+ D +A +RT+ + + ++ Sbjct: 236 FIEEVKTLEDLYGQDFSHLYNKPIDDYQTQTLDGLSGDRRVIQHAINRTVSRVHQSMEAF 295 Query: 275 EYEVNTLHTANG-QTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFA 333 + +NT+H+ G Q F + +G TS E R I +L++ G+G +TA+FP ++ Sbjct: 296 IHNMNTIHSRGGNQVVFSSINYGTDTSAEGRCIIRELLKSTYRGVGNG-ETAIFPIQIWK 354 Query: 334 IRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKT-----------PM 382 + G+++ D NYD+ QLA + ++R +P+ LN D + +K M Sbjct: 355 KKRGVSYLPEDRNYDLYQLACKVTARRFFPNFLNLDATFNQSEDWKADDPQRYIHEVATM 414 Query: 383 GCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEAT------FWKLLDERLV 436 GCR+ V+EN G + GR NL ++N+ R+A+E E F+ LD L Sbjct: 415 GCRTR--VFENRFGPKTSIGRGNLSFSTINIVRLAIECMQVENKEERIALFFAKLDHMLE 472 Query: 437 LARKALMTRIARLEGVKARVAPILYMEGACG-VRLNADDDVSEIFKNGRASISLGYIGIH 495 L + L R+ + A+ P+L G +L +D ++ + G ++ +G+IG+ Sbjct: 473 LTARQLHERMEFQKTAYAKQFPLLMSSLWLGSEKLKPNDSIASVINQG--TLGIGFIGLA 530 Query: 496 ETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCR 555 E + AL G H ++E +A GI IV +R +Q+ E+ + +S+ +TP+E L +F Sbjct: 531 ECLVALTGKHHG-EDEDSQALGIRIVTYIRDRANQFSEQYQHNYSVLATPAEGLSGKFTG 589 Query: 556 LDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEY-PNI 614 D +FG +PG+TD+ YYTNS H+ V K + K + EAPY L GG I Y E + Sbjct: 590 KDRKKFGSLPGITDRDYYTNSNHVPVYYKCSARHKAEVEAPYHDLTRGGHIFYVEMDGDA 649 Query: 615 QHNLKALEDVWDYS-YQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRV 673 HN +A+ V D ++ Y N + C +CG+ T CPKCG+ ++ Sbjct: 650 THNPEAIMRVVDMMDKYNIGYGSVNHNRNRCLDCGYE---NSTPNLEACPKCGSKHLDKL 706 Query: 674 SVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 +R+ GYL R +N K E+ R+ H Sbjct: 707 ---QRITGYLVGTTDR-WNNAKLSELNDRITH 734 >UniRef50_B2RKM0 Anaerobic ribonucleoside-triphosphate reductase n=14 Tax=Bacteria RepID=B2RKM0_PORG3 Length = 798 Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 212/812 (26%), Positives = 345/812 (42%), Gaps = 123/812 (15%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDA--DYCATVAAVVSEQMQGRNQVDI 58 + ++KRDG F E+I++AI++A +A V + V +V Q V + Sbjct: 4 VILRIVKRDGHVQSFDPEKIRQAIIKAYRAGGVHEEAARIDNIVQSVTDFARQSGELVTV 63 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 +IQ VE +LM +A+ YI YR R +ER+KR + + G+V + NA Sbjct: 64 EQIQDRVEEELMRLNPF-IAKKYIIYREWRTVERDKRTSMKHTMDGIVTIEKNDVNLGNA 122 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 N S Q A V K YA ++LL +AH GDIH HDLDY P C+ Sbjct: 123 NMSSHTPAGQMMTFASEVTKDYASKYLLSLRYSRAHRAGDIHIHDLDYYPT-KTTTCVQY 181 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 D+ + +GF+ N I P++I + + I + +GG I D +AP V Sbjct: 182 DIADLYERGFRTKNGSIRTPQNIHSYATLATIIFQTNQNEQHGGQAIPAFDFFMAPGVRK 241 Query: 239 SYNKHRKTAEEWNIPDAE------------------------------------------ 256 S+ H + + + Sbjct: 242 SFVTHLIERLRFVLELRQPTNTDLSTTLPKAIRNLTPLLTDSPQEAGRLYEGLCSASFPF 301 Query: 257 ---------GYANSRTIKECYDAFQSLEYEVNTLHTANG-QTPFVTFGFGLGTSWESRLI 306 A +T K+ + A + + +NT+H+ G Q F + +G TS E R++ Sbjct: 302 SSTEVEIALATAFRKTRKDTHQAMEGFIHNLNTMHSRGGNQVVFSSINYGTDTSPEGRMV 361 Query: 307 QESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD--------------------PN 346 E +LR GLG + +FP +F +++G+N+ + D PN Sbjct: 362 MEELLRATEEGLGHG-EVPIFPIQIFKVKEGINYSEADVKSALENFDDAMAGKVLFSAPN 420 Query: 347 YDIKQLALECASKRMYPDILNYDQVVKVTGSFKT-----------PMGCRSFLGVWENEN 395 +D+ A +K ++P+ + D + ++ MGCR+ V++N N Sbjct: 421 FDLLLKACATTAKALFPNFVFLDTPFNLHEDWRADDPKRYLQEVATMGCRTR--VFDNVN 478 Query: 396 GEQIHDGRNNLGVISLNLPRIALEAKGDEAT-----------------FWKLLDERLVLA 438 G + GR NL S+NLPR+A+EA+ + F + + L Sbjct: 479 GPKSSIGRGNLSFTSMNLPRLAIEARHEAEENCPDGDKETIRSEARLLFLESVRRMSTLI 538 Query: 439 RKALMTRIARLEGVKARVAPILYMEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHE 496 L R AR P + G L +++V ++ K+G ++ +G+IG H Sbjct: 539 ADQLYDRYCYQRTALARQFPFMMGNDVWKGGAALEPNEEVGDVIKSG--TLGIGFIGGHN 596 Query: 497 TINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRL 556 + A++G H ++ + + ++K + +S+ +TP+E L RF R+ Sbjct: 597 AMVAIYGEGHAHNKAAWNTL-YDAISVMNDVAQEYKRKYHLNYSVLATPAEGLSGRFTRM 655 Query: 557 DTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEY-PNIQ 615 D +G++PGVTD YY NSFH+DV + + +KI EAP+ + GG I Y E + Sbjct: 656 DRKRYGIIPGVTDLDYYVNSFHVDVREPIGIAEKIKCEAPFHAITGGGHITYVELDGEAK 715 Query: 616 HNLKALEDVWDYSY-QHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVS 674 N+ + + +++ Y N P+D C CGF G CP CG+ R++ Sbjct: 716 KNVSVILKIVKMMKDENIGYGSINHPVDTCKGCGFKGVIY-----DKCPVCGS---DRIA 767 Query: 675 VTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 RR+ GYL +N+ KQ E RVKHL Sbjct: 768 RLRRITGYLTG-SLDTWNSAKQAEEHDRVKHL 798 >UniRef50_C8P1M7 Anaerobic ribonucleoside-triphosphate reductase n=6 Tax=Bacteria RepID=C8P1M7_ERYRH Length = 783 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 219/781 (28%), Positives = 348/781 (44%), Gaps = 89/781 (11%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEV-----DDADYC-ATVAAVVSEQMQGRNQV 56 ++KRD K+ F E+I AI + + E DDA++ V + E + + Sbjct: 10 ITILKRDNQKMKFNGEKIAIAIKKGFDSLESNKYSNDDANHVYMEVLKQIEEIATHEDYI 69 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTN------ 110 I IQ +E +L+ Y + ++ +YR+ R+ R+ + +E+ N Sbjct: 70 SIEHIQDLIERELLRQNYTDVYESFSQYRNRRNESRKIFISKQHKFLKAIEKLNQKEAVE 129 Query: 111 ASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFF 170 ENAN D V+K +A+ + + D +AH+ G IH HD+D+ P Sbjct: 130 EDSKRENANVDGNSPMGMMLQFGSTVSKEFAKAYQMSEDYYEAHDAGQIHIHDMDFLPMG 189 Query: 171 PMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDE 230 C I+L+ + GF G+ + PK I + A+ A I + +GG +I D Sbjct: 190 -TTTCNQINLEQLFENGFSTGHGHLRKPKDIISYAALAAIAIQSNQNDQHGGQSIPAFDY 248 Query: 231 VLAPFVTASYNKHRKTAEEWNIP------------------------------------- 253 +AP V A++ K K + Sbjct: 249 YMAPGVLATFKKQFKQKLYDFLEVTEHLEEVDFTKIIKHIDQLPSITVDIQSFEPLMKKD 308 Query: 254 --------DAEGYANSRTIKECYDAFQSLEYEVNTLH-TANGQTPFVTFGFGLGTSWESR 304 A A T + + A ++ + +NT+H A Q PF + FG S E R Sbjct: 309 ATLMGLLDKAYDKALRTTDRITFQAMEAFIHNLNTMHSRAGAQVPFSSINFGTDISPEGR 368 Query: 305 LIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPD 364 ++ E+ L+ GLGK +T +FP +F I++G+N+ DPNYD+ +LA++ ++KR++P+ Sbjct: 369 MVMENYLKALDKGLGKG-ETPIFPISIFKIKEGVNYYPEDPNYDLFKLAIKTSAKRLFPN 427 Query: 365 ILNYDQVVKVT-------GSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIA 417 D + T MGCR+ + + + GR NL S+NL R+ Sbjct: 428 FSFIDSPFNKQYYKDGRYETEITYMGCRTRVMGDVTDPEHEEVTGRGNLSFTSINLVRLG 487 Query: 418 LEA------KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVR 469 ++ + D F+K L+ + L + L+ R L +G Sbjct: 488 IKHGILNHEEPDFDGFYKELEHLMDLVKDQLLERFEIQCNKSVSNFKFLLGQGVWKNSKD 547 Query: 470 LNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVD 529 L D++ ++ K+G S++ G+IG+ E + AL G H ++E+ + G+ IV +R D Sbjct: 548 LKPKDNLRKVLKHG--SLAFGFIGLAECLKALTGSHHG-ESEESQRIGLEIVGFMRDLAD 604 Query: 530 QWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYD 589 ++ EE FSL +TP+E L RF +D + FG +P VTD+ YYTNSFH+ V ++ D Sbjct: 605 KYTEEEQLNFSLIATPAEGLSGRFVGIDRSIFGSIPEVTDRTYYTNSFHVPVYYDISIKD 664 Query: 590 KIDFEAPYPPLANGGFICYGEY-PNIQHNLKALEDVWDYSYQH-VPYYGTNTPIDECYEC 647 K+ EAPY L NGG I Y E + NL+A E+V + + + Y N P+D C Sbjct: 665 KLAIEAPYHALTNGGHITYVELDGDTTQNLEAFEEVVRMMHDNEIGYGAINHPVDRDPLC 724 Query: 648 GFTGEFECTSKGFTCPKCGNHDAS---RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVK 704 GFTG CP CG + RR+ GYL R FN K+ E RVK Sbjct: 725 GFTGIIN-----EECPSCGRLETDGDYGFERIRRITGYLVGTLDR-FNDAKRSEEHDRVK 778 Query: 705 H 705 H Sbjct: 779 H 779 >UniRef50_B3EQU4 Anaerobic ribonucleoside-triphosphate reductase n=16 Tax=cellular organisms RepID=B3EQU4_CHLPB Length = 730 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 154/752 (20%), Positives = 269/752 (35%), Gaps = 92/752 (12%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRN---QVDINE 60 ++KRDG V F E+I A+ RA +A D Y A ++A V ++ + + E Sbjct: 12 KIIKRDGKVVSFNREKITFALFRALRATGNPDRQYAAELSAQVVASLEAKRAKEPPSVEE 71 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRL-NQEIRGLVEQTNASLLNENAN 119 IQ VE L A+AYI YR RE + N ++ + ENAN Sbjct: 72 IQDVVEKVLFENCAFDAAKAYIIYRFQHGNMREAKEIFANIDLVDDYLHLKDWRVKENAN 131 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 + ++ IV+ Y L P ++ +AH++G IH HDL C+ D Sbjct: 132 LSYS-LQGLNHHISSIVSSQYWLNELYPAEIAEAHKQGRIHIHDLGSLSV----YCVGWD 186 Query: 180 LKGMLTQGFKMGN--AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 L+ +LT GF+ + P K + +A + G + D LAPF+ Sbjct: 187 LEDLLTSGFRGVQQQSTSAPAKHLRSALGQIVNFFYTMQGEAAGAQAFSGFDTWLAPFIR 246 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF-- 295 + E Q + +N QTPF Sbjct: 247 ---------------------YDKLEYAEVKQCLQEFFFNMNVPTRVGFQTPFTNVTLDL 285 Query: 296 ---------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI 334 E + + + G FP + I Sbjct: 286 LIPAPMRSRQVIIGGEPQDALYGDFQDEMDMFNRAFAEVMLEGDANG-SVFSFPIPTYNI 344 Query: 335 RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENE 394 + + + E +K P N+ ++ M CR L E + Sbjct: 345 TPDFDWEN-----PVYSDIWEMTAKYGIPYFSNFVNSDMNPDDVRS-MCCRLRLDKRELQ 398 Query: 395 NGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE 450 + G ++GV+++NLP + A E F++ L + +A+ +L + +E Sbjct: 399 SRGGGLFGSDPLTGSIGVVTVNLPELGYLAD-SEEEFFQRLSRVMEVAKSSLEVKRKVIE 457 Query: 451 GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDN 510 + + LY + +R N + + N ++ +G +G++E G + Sbjct: 458 RLTEQN---LYPYSSYYLR-NLYRKNGKYWANHFST--VGLLGMNECCLNFMGCS--IGD 509 Query: 511 EQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDK 570 Q R + +++ +R + ++EETG+ ++L +TP+E R R++ A++ + D+ Sbjct: 510 AQGRLFSLKVLDFMRDRLVAFQEETGHIYNLEATPAEGTSYRLARMNRAKYPDIIVANDR 569 Query: 571 -------GYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALED 623 YYTNS L V + ++ + + GG + + + Sbjct: 570 ASRNGAEPYYTNSSQLPVNYTDDLFEALRLQDEMQIRYTGGTVFHAFLGEENLPAVSARQ 629 Query: 624 VWDY--SYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDA-SRVSVTRRVC 680 + + +PY + C G+ + CP C + S V R+ Sbjct: 630 LVRKITANFRLPYVTLSPTFSICPSHGY-----LAGEHRECPVCRDEGGKSSCLVFSRIV 684 Query: 681 GYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 GYL + +NAGKQ E R G G Sbjct: 685 GYLRPVEQ--WNAGKQSEFHDRKLFDRQGSEG 714 >UniRef50_A5HXZ1 Anaerobic ribonucleoside-triphosphate reductase n=36 Tax=Clostridium RepID=A5HXZ1_CLOBH Length = 713 Score = 601 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 224/723 (30%), Positives = 356/723 (49%), Gaps = 47/723 (6%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCAT-VAAVVSEQMQG--RNQVDIN 59 +V+KRDG KV F +I AI AA+ D + + V ++++ + ++ + Sbjct: 2 LYVVKRDGRKVEFDVVKISNAIKGAAEEIAFDMKESENISLTQKVIKKIEDSNKEEISVE 61 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 +IQ VE+ L+ +K++ AY YR +R RE + L I + +T+ NAN Sbjct: 62 DIQNLVEHVLIDSGFKEIGYAYSNYRRERTKIREIKSELMTAIEKIGVETDRD----NAN 117 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 ++ +A K Y ++P+ + + HE GDI+YHDLD + NC+ ID Sbjct: 118 V-GNNFSSKLLRIASESNKWYNL-GVMPKHLAKLHENGDIYYHDLD--SYNLTVNCLNID 173 Query: 180 LKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTAS 239 +L +GF G I PK I +A ++ ++ + ++GG D +A F+ + Sbjct: 174 TGRILQRGFNTGYGTINAPKRIESAAELSCILLQSTQNDMFGGQAHVNFDNDMALFIPNT 233 Query: 240 YNKHRKTAEE-----------WNIPDAEGYANSRTIKECYDAFQSLEYEVNTLH-TANGQ 287 ++ RK E N + R + A Q + Y +NT+H A Q Sbjct: 234 RSEIRKEILENLKGLEVQEEVLNKEKIDELVEERLRLRIHQAMQGIVYNLNTMHSRAGSQ 293 Query: 288 TPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNY 347 PF + G+ ++ LI E L+ GLGK + +FP ++F +++G+N ++ DP Y Sbjct: 294 VPFSSINIGIPKDKDAALICEIFLKEYEKGLGKGEQP-IFPNIIFRVKEGVNREEKDPYY 352 Query: 348 DIKQLALECASKRMYPDILNYD----QVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGR 403 + +LA + A KRM P +N D + G MGCR++ V N +GE+ GR Sbjct: 353 YLFKLAAKIAGKRMNPTFMNMDSDFNKEYYDKGIIPATMGCRTY--VCSNISGEEGPAGR 410 Query: 404 NNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYME 463 N+ ++NLPR+ + AK D F+ LLD RL LAR++L+ R L+ ++ + P + E Sbjct: 411 GNIAPTTINLPRVGILAKKDINKFFNLLDNRLELARESLLHRYNVLKKLRVKDLPFVVGE 470 Query: 464 GAC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIV 521 G L DD + I K G S ++G+IGI ET+ AL G H + E+ + G+ IV Sbjct: 471 GLMKGSENLLPDDSIEPILKQG--SWAIGFIGIAETLTALIGSHHG-ETEEAKELGVKIV 527 Query: 522 ERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDV 581 +R D++KE +S Y+TP+E L +F D FG + GVTDK YYTNS+H+ V Sbjct: 528 SHIRDFCDKYKEIDKLNWSCYATPAEGLSGKFILQDKKVFGEIKGVTDKNYYTNSYHIPV 587 Query: 582 EKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ--HVPYYGTNT 639 ++ +KI+ EAPY + NGG I Y E + + + + D+ Y+Y+ ++ Y G N Sbjct: 588 GFPISIKEKINIEAPYHKICNGGHISYIELDD-YPSEEVIMDIIQYAYRNTNISYMGINF 646 Query: 640 PIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEV 699 I C ECG + C CG+ + + RV GYL F +GK E Sbjct: 647 HIKYCRECG----TYLGVEEEACNNCGSTNIQGI---SRVTGYLS--LDERFGSGKVAER 697 Query: 700 KRR 702 R Sbjct: 698 ADR 700 >UniRef50_C7N7G2 Anaerobic ribonucleoside-triphosphate reductase n=49 Tax=cellular organisms RepID=C7N7G2_SLAHD Length = 816 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 163/749 (21%), Positives = 289/749 (38%), Gaps = 100/749 (13%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDD-ADYCATVAAVVSEQMQGR---NQVDIN 59 V+KRDG V F ++I AI +A A +A V+ + + +++ + Sbjct: 3 QVVKRDGKIVDFSIDKISVAITKAFDALNKQYHPSVIELIALHVTSDFEDKIVDDKITVE 62 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGR--LNQEIRGLVEQTNASLLNEN 117 +IQ +VE L Y +A+AYI YR R+ R +++ + N + EN Sbjct: 63 DIQDSVEKVLSESGYADVAKAYILYRRQREKVRNVNSALLNYKDLVDNYLKINDWRVKEN 122 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 + V +G + +Y + ++ +AH IH HDL C Sbjct: 123 STVTYSV-GGLILSNSGAITANYWLSEVYDDEIAEAHRSAAIHLHDLSML----TGYCAG 177 Query: 178 IDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 LK ++ +G G P +ST + + + G + D LAPF Sbjct: 178 WSLKQLIQEGLGGVPGKITSSPASHLSTLCNQMVNFLGIMQNEWAGAQAFSSFDTYLAPF 237 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF 295 V ++ + KE QS Y VNT Q PF Sbjct: 238 VK---------------------VDNLSQKEVKQCIQSFIYGVNTPSRWGTQAPFSNITL 276 Query: 296 -----------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVF 332 E ++ ++ + I G + +P + Sbjct: 277 DWTVPNDLKNLNAIVGGKEMDFTYGECQHEMDMVNKAFIDIMIEGDANG-RGFQYPIPTY 335 Query: 333 AIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE 392 +I N + + N +L E +K P NY ++ M CR L + E Sbjct: 336 SITRDFNWDETENN----KLLFEMTAKYGTPYFSNYINSDMEPSDVRS-MCCRLRLDLRE 390 Query: 393 NENGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIAR 448 G ++GV+++NLPRIA A DEA F+ LD + +A ++L T+ A Sbjct: 391 LRKKSGGFFGSGESTGSIGVVTINLPRIAYLAT-DEADFYARLDHLMDVAARSLKTKRAV 449 Query: 449 LEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHET-INALFGGEHV 507 + + + LY + F+N ++ +G IG++E +NA + + Sbjct: 450 ITTLLDKG---LYPYTKRYL---------GTFENHFST--IGLIGMNEVGLNANWLRADL 495 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--P 565 D E+++ ++ +R + ++E G ++L +TP+E+ RF + D ++ + Sbjct: 496 TD-ERVQRFARDVLNHMRNRLSDYQEMYGDLYNLEATPAESTTYRFAKHDKEKYPDIITA 554 Query: 566 GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVW 625 + YYTNS HL V + + +D + L G + + + KA ++ Sbjct: 555 NMNGTPYYTNSSHLPVGYTEDVFSALDIQDDLQTLYTSGTVFHAFLGEKLPDWKAAANLV 614 Query: 626 DYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYL 683 ++ +PYY + C + G+ T + FTCP CG ++ V R+ GY Sbjct: 615 RKIAENYKLPYYTMSPTYSVCKDHGY-----LTGEQFTCPHCG----AKTEVYSRITGYY 665 Query: 684 GSPDARPFNAGKQEEVKRRVKH-LGNGQI 711 + +N GK +E K R + +G+ + Sbjct: 666 RPV--QNWNDGKAQEYKDRKVYNIGHSTL 692 >UniRef50_A6TN19 Anaerobic ribonucleoside-triphosphate reductase n=23 Tax=cellular organisms RepID=A6TN19_ALKMQ Length = 710 Score = 597 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 162/747 (21%), Positives = 276/747 (36%), Gaps = 90/747 (12%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATV---AAVVSEQMQGRNQVDI 58 V KR+G V F + +IKEAI AAK+ D + + A + + N + Sbjct: 3 VMKVQKRNGEIVDFDAIKIKEAIFSAAKSVGGKDEMTASRLSKLAVDIVSETYAANIPSV 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE--IRGLVEQTNASLLNE 116 +IQ VE L+ + + A++YI YR + RE + + +NE Sbjct: 63 EDIQDIVEKVLIEEGHAKTAKSYILYRKKQKDIREVKNLFMDAEVMVEEYVNLEDWRVNE 122 Query: 117 NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 NAN + ++ + K Y + +++ AH +GD+H HDL C Sbjct: 123 NANMGFSLQGLNNHIVES-ITKKYWLNKIYTKELRDAHIQGDLHIHDLGLLA----PYCC 177 Query: 177 LIDLKGMLTQGFKM--GNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 234 DL+ L GFK G E +PPK +A ++ + G ++ ID LAP Sbjct: 178 GWDLEAFLKDGFKGAKGKVESKPPKHFESALGQLVNLLYTLQGEAAGAQAVSSIDTYLAP 237 Query: 235 FVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFG 294 F+ Y + + ++ A Q + +N QTPF Sbjct: 238 FI---------------------YYDKMSYEQVKKAIQRFVFNLNVPTRVGFQTPFTNVT 276 Query: 295 F-----------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLV 331 E L + + G G + FP Sbjct: 277 LDITPHELLKKQRVIIGGENMDKNYGEFQKEMDLFNMAFCEVMMEGDGAG-RAFSFPIPT 335 Query: 332 FAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 I ++ +E K P N+ ++ M CR L Sbjct: 336 VNITKDFPWDT-----EVVNAIMEMTRKFGTPYFANFINSDMAPEDIRS-MCCRLRLDNR 389 Query: 392 ENENGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 E G ++ V++LN+ RI +K E F + E + A++ + Sbjct: 390 ELRKRGGGLFGANPLTGSINVVTLNMARIGYTSKNMEE-FKSKVRELMQNAKQICEDKRV 448 Query: 448 RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHV 507 LE LY +R + E FKN ++ +G G++E L G + Sbjct: 449 ILEQYMD---VGLYPYSRYYLR-DVKSATGEYFKNHFST--IGLNGMNEACLNLLGVD-- 500 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG-VVPG 566 E+ + I+E + + + ++EETG ++L ++P+E RF RLD + ++ Sbjct: 501 ITTEEGNEFAVEIMEFMNRVIQIFQEETGSLWNLEASPAEGAAYRFARLDKKIYPRIITQ 560 Query: 567 VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWD 626 T++ YYTNS L V + ++ ++ + L GG + +G +++ + + Sbjct: 561 GTEEPYYTNSTQLPVNHTKDIFEAVELQEKLQSLYTGGTVLHGFIGEEIESVETCKMLLK 620 Query: 627 YSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLG 684 ++ +PY C E G+ + + F CP CG V RV G+ Sbjct: 621 RVMENSEIPYITITPTFSICQEHGY-----LSGEHFECPHCGKES----EVWTRVVGFHR 671 Query: 685 SPDARPFNAGKQEEVKRRVKHLGNGQI 711 A +N GK+EE K R + + Sbjct: 672 PVQA--WNPGKKEEYKDREEFCAEASL 696 >UniRef50_Q733N6 Anaerobic ribonucleoside-triphosphate reductase, putative n=91 Tax=Bacteria RepID=Q733N6_BACC1 Length = 619 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 203/624 (32%), Positives = 315/624 (50%), Gaps = 27/624 (4%) Query: 95 RGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAH 154 L + +V L+ ENAN D + A AK+YA ++LL V +A Sbjct: 9 EEELMKVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVENLLSDQVKKAI 68 Query: 155 ERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQ 214 ++ HDLD+ C I L ML GF G+ + P+ I +A A+++ I Sbjct: 69 NENILYPHDLDFYATG-TTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALSSIIFQA 127 Query: 215 VASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNI--PDAEGYANSRTIKECYDAFQ 272 + +GG + D LAP+V + +H+K + + + E +A T + Y A + Sbjct: 128 NQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQSYPLTKEQIEEFAWKETENDTYQACE 187 Query: 273 SLEYEVNTLH-TANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLV 331 + + N++H GQ PF++ +G TS E RL+ + +L+ AGLGK +T +FP + Sbjct: 188 AFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLKATQAGLGKG-ETPIFPIQI 246 Query: 332 FAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVK------VTGSFKTPMGCR 385 F ++ G+N ++ DPNYD+ +LALE ++R++P+ D S MGCR Sbjct: 247 FKMKKGVNFEECDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVCYMGCR 306 Query: 386 SFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTR 445 + V N +GE+ GR NL S+NL ++AL + G + F++ L+ L + + L+ R Sbjct: 307 TR--VMSNIHGEETAIGRGNLSFTSINLVKLALIS-GSQEAFFEALNYYLDVGIQQLLER 363 Query: 446 IARLEGVKARVAPILYMEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFG 503 +AR LY +G G +L +D V+ I K G ++SLG+IG+ E + AL G Sbjct: 364 FEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILKQG--TLSLGFIGLAECLVALTG 421 Query: 504 GEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGV 563 H ++E+ G I+ +R +D+ EE FS+ +TP+E L +F + D EFGV Sbjct: 422 KHHG-EDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGV 480 Query: 564 VPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQ-HNLKALE 622 + G+T+ YYTNSFH+ V + +KI E P+ L NGG I Y E HN KAL+ Sbjct: 481 ISGITNHNYYTNSFHIPVYYDIQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALK 540 Query: 623 DVWDYSYQH-VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCG 681 + ++ V Y N P+D C C + G G CP CGN D + + RR+ G Sbjct: 541 QIVQAMAENGVGYGSINHPVDRCKCCSYHGVI-----GNECPSCGNEDEANIERIRRITG 595 Query: 682 YLGSPDARPFNAGKQEEVKRRVKH 705 YL D +N+ K+ E RVKH Sbjct: 596 YLVG-DMSKWNSAKRSEEMDRVKH 618 >UniRef50_B8DLP5 Anaerobic ribonucleoside-triphosphate reductase n=15 Tax=Desulfovibrio RepID=B8DLP5_DESVM Length = 704 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 166/741 (22%), Positives = 265/741 (35%), Gaps = 99/741 (13%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 M H+ KRDG + +R+ AI +A KA+ + D +A V ++ G + + + Sbjct: 1 MPQHIRKRDGRVETWSVDRVGHAINKALKASGIKDPLLGKRLAQRVEAKLDGVDMPEQEQ 60 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE--IRGLVEQTNASLLNENA 118 +Q V+ LM +A YI YR R R + + + +NEN+ Sbjct: 61 VQDLVQRVLMEARLYAVAERYIIYREKRREMRSQNEAYLDVARMIESYLDRSDWRVNENS 120 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 N +AG V Y + P ++ AH G H HDL F C Sbjct: 121 NMGHS-FQGLILHMAGSVQARYVLEK-YPEEIRLAHTHGYFHIHDL---SFGLAGYCAGW 175 Query: 179 DLKGMLTQGFKM-GNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 L+ +L +GF + G P + A + + + G N ID LAPF+ Sbjct: 176 SLRDLLLEGFNLKGRCCASPARHFDAACGQIVNFLGTLQNEWAGAQAFNNIDTYLAPFIR 235 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF-- 295 T E Q L Y +NT GQ+PF F Sbjct: 236 HD---------------------KLTYDEVKQGVQKLVYNLNTTSRWGGQSPFTNFTLDM 274 Query: 296 ---------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI 334 + E + + + + G R FP + + Sbjct: 275 APPRHIANEPVIIGGQFQDSTYGDYAAEMDMFNRAFIEVMLEGDADGRI-FSFPIPTYNV 333 Query: 335 RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENE 394 D +L L +K P N+ ++ M CR + + E Sbjct: 334 TPDFPWDT-----DTGKLLLRMTAKYGAPYFQNFINSDLNPEDVRS-MCCRLQMDLREIR 387 Query: 395 NGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE 450 G ++GV++LNLP+ A A+G E F ++ E +AR AL + Sbjct: 388 KRTGGLFGSGDLTGSIGVVTLNLPKFAYLAQG-EEDFLDMITEYAEMARDALEYKRKLCT 446 Query: 451 GVK-ARVAPILYMEGACGVRLNADDDVSEIFKNGRASI--SLGYIGIHETINALFGGEHV 507 + A + P KNG A ++G IG HE L G Sbjct: 447 QMLDAGMFPF----------------SRRYLKNGYAGHFSTIGLIGGHEACLNLLGK--G 488 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVP-G 566 + E ++ LR+ +++EETG+ ++L +TP E C R R+D A + + Sbjct: 489 IETEAGLRLMKRVLHHLRELTVRFQEETGHMYNLEATPGEGTCYRLARIDRALYEDIATS 548 Query: 567 VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWD 626 D YYTNS L V + + ++ + L NGG + + + ++++ Sbjct: 549 GGDTPYYTNSTLLPVGFTEDVFAALEHQNELQTLYNGGTVFHSFLGEAAPDEASVKNYLL 608 Query: 627 YS--YQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLG 684 + +PY C G+ + CP+CG V RV GY Sbjct: 609 KAMQKTRIPYISVTPTFSVCQSHGY-----LRGEHMNCPECGEEA----EVYTRVVGYYR 659 Query: 685 SPDARPFNAGKQEEVKRRVKH 705 +N GKQ+E K RV++ Sbjct: 660 PVSR--WNLGKQQEYKERVEY 678 >UniRef50_C6JR80 Ribonucleoside-triphosphate reductase n=2 Tax=Fusobacterium RepID=C6JR80_FUSVA Length = 748 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 236/752 (31%), Positives = 375/752 (49%), Gaps = 56/752 (7%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V+KR+G V F E+I++ + + K + D + + +++ G ++ + IQ Sbjct: 4 IEVIKRNGSIVTFNKEKIEKVLEKIDKEVKFIDKVSIEHMMNDIVKKINGNTRMSVEAIQ 63 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIER-EKRGRLNQEIRGLVEQTNASLLNENANKD 121 V L + + A+A+ YR R +R + + + + +V+ + EN+NK+ Sbjct: 64 DIVFYTLCTNGLFEQAKAFQTYRTQRAEQRLMEANTVFRHMTDIVDVGD----RENSNKN 119 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 S + QRDL+AG + Y + + +++ AH + IH+HD D + NC L +++ Sbjct: 120 SMLPSVQRDLIAGEYFR-YILEKNIDKELWAAHRKKTIHWHDSDVDT--KLTNCCLFNIE 176 Query: 182 GMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYN 241 ML G ++ NA++ P S+ TA + QI+A +++ YGG ++ +EV A + ++ Sbjct: 177 DMLRNGTRITNADVCQPNSVGTAMNIAMQIMASISASQYGGVSLPNFNEVFAEYAKKNFK 236 Query: 242 KHR--------------------------------KTAEEWNIPDAEGYANSRTIKECYD 269 K+ P A RT K+ YD Sbjct: 237 KNFMRAYNDKLSTESNISRVTEEDIEKELGEISSGNEKLASEKPVEFQIAKERTAKDIYD 296 Query: 270 AFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPK 329 A Q EY+ N++ + QTPF T F + TSWES I S L+ R GLG+ A+FPK Sbjct: 297 ACQLFEYQTNSILGSASQTPFSTITFNIPTSWESEHIILSYLKVRQTGLGEKHIPAIFPK 356 Query: 330 LVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLG 389 L + + DG N KKGD + I + +C + YPDIL Y + G + MGCRS + Sbjct: 357 LSYMVVDGYNFKKGDKYFYITEEVAKCIANTYYPDILFYSKEDYDAGKYYARMGCRSRVN 416 Query: 390 VWENENGEQIHDGRNNLGVISLNLPRIALEAKGDE----------ATFWKLLDERLVLAR 439 NGE H GR N GV +LN+P+IAL+ DE F +L++R L + Sbjct: 417 HEYQVNGEYQHYGRFNYGVATLNVPQIALDVLKDERYGGAEGNRLERFLDILEKRKELMK 476 Query: 440 KALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETIN 499 KA+ TR + ++A+ APIL+ G RL DD V E+ K RAS+S G++G+ + + Sbjct: 477 KAIQTRFENVRHLQAKKAPILFQYGGIA-RLEPDDTVEELLKTDRASVSYGFLGLDDAVR 535 Query: 500 ALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTA 559 L + E+ GIAI++ +R+ D K ETG S+Y TP+E+ F D Sbjct: 536 ILSDDKENISTEKGHEMGIAIMKAIRKQADDIKVETGLPVSVYGTPAESSIATFFNKDVE 595 Query: 560 EFGVV--PGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHN 617 +G + + ++ YYTNSFH E ++ +DKID EAP+ NGG I Y E +N Sbjct: 596 NYGEIMPEWLREREYYTNSFHFSSELPIDSFDKIDVEAPFIKYCNGGNIMYVENGGKTYN 655 Query: 618 LKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSK--GFTCPKCGNHDASRVS 674 +A+ ++ Y++ + Y+ NT D CYECG+TGE K + CP CGN D ++ Sbjct: 656 SQAIIELIQYAHDAGIEYFAVNTISDVCYECGYTGEISYNEKTASYKCPHCGNEDGMKMK 715 Query: 675 VTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 + RR CGY+ + + G+ +E+K R H+ Sbjct: 716 IQRRCCGYISNYNITHALEGRMKEIKNRAIHV 747 >UniRef50_Q6QGI8 Putative anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Enterobacteria phage T5 RepID=Q6QGI8_BPT5 Length = 574 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 306/623 (49%), Positives = 400/623 (64%), Gaps = 59/623 (9%) Query: 85 RHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQH 144 R+D +E + + + + LL NANK S+ PTQRD+LAG ++K+ + Sbjct: 3 RNDELKYKEMQSLIRNCKEIIEGSADEELLFNNANKPSERFPTQRDMLAGELSKYLILEE 62 Query: 145 LLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTA 204 + P + AH GDIH+HD DY+ M NC L+ L+ ML G K+GNAEI P SI+TA Sbjct: 63 M-PVQIRNAHMIGDIHFHDADYAALG-MTNCCLVALEDMLKNGMKVGNAEISTPNSITTA 120 Query: 205 TAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEG--YANSR 262 A+TAQII QV+SH YGGT+++R+DEVLAP+V SY+K+ A+ W +A+ A Sbjct: 121 AAITAQIITQVSSHQYGGTSVDRLDEVLAPYVRKSYDKNHAFAKRWTKDEAKASVMATEM 180 Query: 263 TIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNR 322 T KE YDA Q LEYE+NT+ +NGQ+PF+TFGFGLGTSWE+RLIQ++IL+ R+ GLG N+ Sbjct: 181 TEKEVYDACQGLEYEINTMFNSNGQSPFITFGFGLGTSWEARLIQKAILKVRMDGLGINK 240 Query: 323 KTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPM 382 +TA+FPKLVF +RDG+N K GD NYDIK+LA++C ++RMYPD ++YD+VV+VTG +K M Sbjct: 241 RTAIFPKLVFVLRDGVNMKPGDVNYDIKKLAMKCTAERMYPDYISYDKVVEVTGDYKVSM 300 Query: 383 GCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKAL 442 GCRSFL E+ GRNNLGV+S+NLPRIA+EA+G+ F+ LL+ R+ A KAL Sbjct: 301 GCRSFLAATEDGE----TAGRNNLGVVSVNLPRIAIEAEGNIDLFFDLLELRVDTALKAL 356 Query: 443 MTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALF 502 R+ RL+ ++A+ APILYM GA G+RL D+ V Sbjct: 357 EWRVDRLKYIQAKAAPILYMSGAFGLRLGPDEYVF------------------------- 391 Query: 503 GGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG 562 DQ KEET G+SLY+TPSE+LCDRFCRLD F Sbjct: 392 --------------------------DQKKEETKLGYSLYATPSESLCDRFCRLDREYFP 425 Query: 563 VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALE 622 + KGYYTNS HLDVE+KV P K D+E+ + P+A+GG I Y E P+++ ALE Sbjct: 426 EHEDILSKGYYTNSHHLDVERKVAPNVKFDYESNFTPIASGGCISYVELPDMKRFPDALE 485 Query: 623 DVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY 682 V +Y+ V Y+G NTP+D C +CGF GE + GF CP CGNHD + VTRRVCGY Sbjct: 486 WVINYAASKVHYFGINTPVDSCGKCGFLGETVASEDGFKCPICGNHDPETLEVTRRVCGY 545 Query: 683 LGSPDARPFNAGKQEEVKRRVKH 705 LG+P ARPFN GKQ EV RVKH Sbjct: 546 LGNPGARPFNPGKQHEVMGRVKH 568 >UniRef50_A9KI88 Anaerobic ribonucleoside-triphosphate reductase n=81 Tax=Bacteria RepID=A9KI88_CLOPH Length = 800 Score = 572 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 156/744 (20%), Positives = 283/744 (38%), Gaps = 100/744 (13%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEV-DDADYCATVAAVVSEQMQGR---NQVDI 58 V+KRDG F +I AI +A A + + D ++ V+ Q + + V + Sbjct: 2 IKVVKRDGEIAEFALSKISSAIAKAFNATQKLYNEDIINLLSLRVTSDFQTKLKDSTVTV 61 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGR--LNQEIRGLVEQTNASLLNE 116 +IQ +VE+ L Y +A+AYI YR +R+ R + +EI + + + E Sbjct: 62 EDIQDSVEHVLEQSGYTDVAKAYILYRKNREKIRNMKSTILDYKEIVDMYVKEEDWRVKE 121 Query: 117 NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 N+ V +G + +Y + ++ AH DIH HDL C Sbjct: 122 NSTVTYSV-GGLILHNSGAITANYWLSEIYDEEIANAHRSADIHIHDLSML----TGYCA 176 Query: 177 LIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 234 LK ++ +G G P K +ST + + + G + D LAP Sbjct: 177 GWSLKQLIKEGLGGIPGKITSSPAKHLSTLCNQMVNFLGIMQNEWAGAQAFSSFDTYLAP 236 Query: 235 FVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFG 294 FV ++ + +E Q Y VNT Q PF Sbjct: 237 FVK---------------------VDNLSYEEVKQCIQCFIYGVNTPSRWGTQAPFSNIT 275 Query: 295 F-----------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLV 331 E L+ ++ + I G + +P Sbjct: 276 LDWTVPNDLAELPCIVGGKEMEFKYKDCKKEMDLVNKAFIEIMIEGDANG-RGFQYPIPT 334 Query: 332 FAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 ++I + + N +L E +K P NY ++ M CR L + Sbjct: 335 YSITKDFDWSDTENN----RLLFEMTAKYGTPYFSNYINSDMEPSDVRS-MCCRLRLDLR 389 Query: 392 ENENGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 E G ++GV+++N+PRIA + +EA F++ LD + ++ ++L + Sbjct: 390 ELRKKTGGFFGSGESTGSVGVVTINMPRIAYVS-ANEAEFYQRLDRMMDISARSLKVKRK 448 Query: 448 RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHET-INALFGGEH 506 + + LY + F N ++ +G IG++E +NA + G+ Sbjct: 449 VITKLLEEG---LYPYTKRYL---------GTFDNHFST--IGLIGMNEVGLNARWLGKD 494 Query: 507 VYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVP- 565 + D ++ + + ++ +R + ++ E G ++L +TP+E+ R + D + + Sbjct: 495 MTD-KKTQQFSVEVLNHMRDRLGDYQVEFGDLYNLEATPAESTSYRLAKHDRKRWSEIRT 553 Query: 566 --GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALED 623 D YYTNS HL VE + + +D + L G + + + +A Sbjct: 554 AGKEGDTPYYTNSSHLPVEYTDDIFSALDVQDQLQTLYTSGTVFHAFLGEKLPDWEAAAK 613 Query: 624 VWDYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCG 681 + ++ +PYY + C G+ + F CP+CG + V R+ G Sbjct: 614 LVRTISENYKLPYYTMSPTYSICKNHGY-----IKGESFVCPECG----EKAEVYSRITG 664 Query: 682 YLGSPDARPFNAGKQEEVKRRVKH 705 Y + +N GK +E K R+++ Sbjct: 665 YYRPV--QNWNEGKSQEYKNRIEY 686 >UniRef50_B1YME3 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Bacillales RepID=B1YME3_EXIS2 Length = 612 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 201/627 (32%), Positives = 291/627 (46%), Gaps = 29/627 (4%) Query: 96 GRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHE 155 + +VE + + ENAN D K + + LA + AK + LL + QA Sbjct: 1 MDVQTLYEQIVEHPSTDEMQENANVDGKSPLGKLNRLAAVTAKQMMQDMLLSAEAKQALA 60 Query: 156 RGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQV 215 I+ HD DY C+ + L +LT GF M + I P + I +A A+ A I+ Sbjct: 61 ENIIYIHDADYY-VTGTTTCVQLPLGRLLTDGFTMTHGSIRPAQDIRSALALAAIIMQAN 119 Query: 216 ASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEE----WNIPDAEGYANSRTIKECYDAF 271 + +GG + D LAPFV ++ + K E W+ YA S T + Y A Sbjct: 120 QNMQHGGQSYPMFDFDLAPFVEKTFQRQLKKIRELVPKWSNRRKRAYAMSETYELTYQAC 179 Query: 272 QSLEYEVNTLH-TANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKL 330 ++ + N++H GQ PF++ +G TS RL+ ++L AGLGK +T +FP Sbjct: 180 EAFIHNTNSMHSRGGGQVPFISINYGTDTSTFGRLLIRALLEATRAGLGKG-ETPIFPIQ 238 Query: 331 VFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKV----TGSFKTPMGCRS 386 +F ++ G+N + DPNYD+ QLA E KR++P+ D MGCR+ Sbjct: 239 IFKVKTGVNFQSEDPNYDLFQLATEVTGKRLFPNFAFLDAPFNQSTGTPDEEVAYMGCRT 298 Query: 387 FLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRI 446 V EN G GR NL SLNL R+AL + + F + + L + L+ R Sbjct: 299 R--VLENRQGRASVVGRGNLSFTSLNLVRLALMTQSLDRMF-EAVTTYTTLICEQLLERY 355 Query: 447 ARLEGVKARVAPILYME-GACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGE 505 A LY G L D V + + G ++S+G+IG+ E + L G Sbjct: 356 HYQANRTADEFTFLYRHIWRGGETLAGSDRVEPVLRQG--TLSVGFIGLAEALIVLTGQH 413 Query: 506 HVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVP 565 H ++E G A++ +R DQ+ E+TG FS+ +TP+E L +F D +FGV+ Sbjct: 414 HG-ESELAHGIGQALIRLIRTIADQYGEKTGLNFSVLATPAEGLSGKFTVADKEQFGVIE 472 Query: 566 GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQ-HNLKALEDV 624 VTDK YYTNSFHL V V +KI EAP+ L NGG I Y E N +A+ED+ Sbjct: 473 RVTDKPYYTNSFHLPVGTNVTIREKIRLEAPFHALCNGGHITYVETDGALAENPEAIEDI 532 Query: 625 WDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYL 683 + + Y N PID C C CP CG + + RR+ GYL Sbjct: 533 VRLMAESGIGYGSINHPIDRCLTCRTEQTM-----EQACPVCGGEE---IERIRRITGYL 584 Query: 684 GSPDARPFNAGKQEEVKRRVKHLGNGQ 710 R +N K+ E + RVKH Sbjct: 585 VGTMDR-WNPAKRAEEQDRVKHAAASD 610 >UniRef50_C6BJE1 Anaerobic ribonucleoside-triphosphate reductase n=20 Tax=Bacteria RepID=C6BJE1_RALP1 Length = 687 Score = 570 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 150/699 (21%), Positives = 254/699 (36%), Gaps = 85/699 (12%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 +T V KRDG PF +++I++AI A +A D + + V + I Sbjct: 6 VTGQVTKRDGSLAPFDAQKIRQAIAAAGQATGEFDTIEAQHLTSGVVAHLAPLPCPGIEI 65 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQ VE L+ Y + ARAYI YR R + L + E NAN Sbjct: 66 IQNCVEEVLVDAGYWRTARAYIVYREQHARLRSLKHTLVDVESTMEEYLEQRDWRVNANA 125 Query: 121 DSKVI-PTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 + +AG V +Y H+ + AH GD+H HDLD C Sbjct: 126 NQGYSLGGLILNVAGKVTANYWLSHVYSPEAGTAHREGDLHIHDLDMLSG----YCAGWS 181 Query: 180 LKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 L+ +LT+GF G E PP+ +S A + + + G + D +APF+ Sbjct: 182 LRQLLTEGFNGVPGKVEATPPRHMSAAIGQIVNFLGTLQNEWAGAQAFSSFDTYMAPFIR 241 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF-- 295 + + + Q L Y +N QTPF F Sbjct: 242 RD---------------------AMSYAAVKQSMQELIYNLNVPSRWGTQTPFTNLTFDW 280 Query: 296 ---------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI 334 E +I + + +AG K+ + FP + I Sbjct: 281 TCPADLREQVPYIGGEEMPFTYGDLQPEMDMINRAYIEVMMAGDAKD-RAFTFPIPTYNI 339 Query: 335 RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENE 394 + + PN + E ++ P N+ ++ M CR L + E Sbjct: 340 TSDFDWEH--PNTTLL---FEMTARYGLPYFQNFLNSDLEPHMVRS-MCCRLQLDLRELL 393 Query: 395 NGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE 450 G ++GV+++N R+ GDEA LD L L R L + ++ Sbjct: 394 KRGNGLFGSAEQTGSIGVVTVNCARLGYLYAGDEAALLARLDTLLALGRDVLEVKRKFVQ 453 Query: 451 GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDN 510 + + LY + +N +++ G GI+E + Sbjct: 454 RLIDQG---LYPYTRRYL---------GTLRNHFSTL--GVNGINEMVRNFTHDADDITT 499 Query: 511 EQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--PGVT 568 A + +++ +RQ + +++E TG+ ++L +TP+E RF R D + + G T Sbjct: 500 PFGHAMAVRLLDHVRQRMTEFQEATGHLYNLEATPAEGTTYRFAREDRKRWPGILQAGTT 559 Query: 569 DKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYS 628 + YYTNS L V +P++ + + GG + + + +A +++ + Sbjct: 560 AQPYYTNSSQLPVGYTDDPFEALARQEALQSKYTGGTVLHLYMNEAISSPQACKELVRRA 619 Query: 629 YQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKC 665 + +PY C + G+ + CPKC Sbjct: 620 LANFRLPYITITPTFSICPKHGY-----LSGHHTFCPKC 653 >UniRef50_B3QGB6 Anaerobic ribonucleoside-triphosphate reductase n=5 Tax=Bacteria RepID=B3QGB6_RHOPT Length = 673 Score = 567 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 148/705 (20%), Positives = 250/705 (35%), Gaps = 88/705 (12%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR---NQVD 57 + ++KR G + F S +I+ AI RA +A + + + + R Sbjct: 9 LPRAIIKRSGAEAAFASAKIRSAIARAGQATGEFGELEAGLLTSQSVKVIAHRFAGAVPQ 68 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 I +IQ VE L+S + ARAYI YR R R R I + E + + N Sbjct: 69 IEQIQDIVEQVLISANHLTTARAYIVYREKRSQARNDRKVAVDAIASINEYLDRTDWRVN 128 Query: 118 ANKDSKVI-PTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 AN + L+G V +Y H+ P +V +AH GD+H HDLD C Sbjct: 129 ANANQGYSLGGLILNLSGKVVANYWLSHVYPPEVGRAHRDGDLHIHDLDMLSG----YCA 184 Query: 177 LIDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 234 L+ +LT+G G E PPK +S+A + + + G + D LAP Sbjct: 185 GWSLRMLLTEGLNGVPGKVEASPPKHLSSAIGQIVNFLGTLQNEWAGAQAFSSFDTYLAP 244 Query: 235 FVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFG 294 F+ + + Q L Y +N QTPF Sbjct: 245 FLRKD---------------------GLSYADVLQGIQELVYNLNVPSRWGTQTPFTNLT 283 Query: 295 F-----------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLV 331 F E +I + + G K + FP Sbjct: 284 FDWTCPEDLRDEVPVIGGEEMDFTYGELQPEMDMINRAYMEVMTKGDAKG-RVFTFPIPT 342 Query: 332 FAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 + I + + + E +K P N+ M CR L + Sbjct: 343 YNITPDFPWESEN-----AERLFEMTAKYGLPYFQNFLNSELKPH-MIRSMCCRLQLDLT 396 Query: 392 ENENGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 E G ++GV+++N R+ +GDEA + LD L +AR +L + Sbjct: 397 ELLKRGNGLFGSAEQTGSIGVVTINCARLGHRHRGDEAGLLRALDTLLDIARTSLEIKRK 456 Query: 448 RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHV 507 ++ Y + G +N ++ +G G++E I Sbjct: 457 VVQRYMDDGL-FPYSKRYLGT-----------LRNHFST--VGINGVNEMIRNFTADCET 502 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--P 565 + +++ +R + ++E+TG ++L +TP+E RF + D F + Sbjct: 503 IATPWGHGFAVRVLDHVRARIVAFQEQTGNLYNLEATPAEGTTYRFAKEDRKRFPGILQA 562 Query: 566 GVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVW 625 G D YYTNS L V +P++ ++ + GG + + + + +A + + Sbjct: 563 GTEDNPYYTNSSQLPVGFTDDPFEALERQDDLQRKYTGGTVLHLYMGSKLSSGEACKKLV 622 Query: 626 DYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNH 668 + ++ +PY C G+ + CPKC Sbjct: 623 RRALENFRLPYVTVTPTFSICPTHGY-----IEGEHAFCPKCDAE 662 >UniRef50_C6IYT0 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Bacillales RepID=C6IYT0_9BACL Length = 658 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 204/647 (31%), Positives = 318/647 (49%), Gaps = 55/647 (8%) Query: 104 GLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHD 163 +V+ N +L ENAN + + + +K YA +LP +VQA + ++ HD Sbjct: 24 EIVQSRNLEVLRENANLNGESFSGKMSKFGSEYSKWYASHFVLPTRLVQAIQDNIVYVHD 83 Query: 164 LDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGT 223 LD NC+ I +L +GF GN + PP SI TA A+ A I + +GG Sbjct: 84 LDQYALG-TTNCIFIPFDKLLRKGFNTGNGSVRPPTSIMTAMALVAIIFQSQQNSQFGGV 142 Query: 224 TINRIDEVLAPFVTASYNKHRKTAEEWN----------------------IPDAEGYANS 261 + N++D L P+V S+ K+ + ++ P A YA Sbjct: 143 SANKLDFDLVPYVAKSFAKYFRKGLDYFEEGDANADLGDITMSRSDLRDQYPKAFNYALK 202 Query: 262 RTIKECYDAFQSLEYEVNTLH-TANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGK 320 T E + A +SL + +NT+ A GQ PF + +G TS E +L+ +S+L + GLG Sbjct: 203 ETKSETFQAAESLIHNLNTMSSRAGGQIPFTSINYGTCTSPEGQLVIDSLLTATMRGLGH 262 Query: 321 NRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVK------- 373 +T +FP +F + G+N G+PNY + A EC++KR+YP+ N D + Sbjct: 263 G-ETPIFPIQIFKCKQGVNQNPGEPNYSLFLKAAECSAKRLYPNFANLDAPLNLMYYDPT 321 Query: 374 VTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA--------KGDEA 425 + MGCR+ V + G G+ NL +LNL ++ L+ + DE Sbjct: 322 DPDTEFATMGCRTR--VLADRFGRNRLSGKGNLSFNTLNLVKLGLKYGIALGHRKEPDER 379 Query: 426 TFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC--GVRLNADDDVSEIFKNG 483 F++ L + +A + L+ R + KA+ + + EG G +L DD V E+ K+G Sbjct: 380 GFYRELTHYMNIALEGLLHRFSIQASQKAKASDFMMREGVWEGGEQLAPDDQVGELLKHG 439 Query: 484 RASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYS 543 S+S+G+IG+ E + A++G H ++E + K ++ +R D E +L++ Sbjct: 440 --SLSIGFIGLAECMKAMYGKHHG-EDEAVYQKAYDLIAYMRDYCDGQSEIHNLNITLFA 496 Query: 544 TPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANG 603 TP+E L +F + D A +G +PG+ D+ YYTNSFH+ V ++ KI+ EA + L N Sbjct: 497 TPAEGLSGKFTKRDRAVYGPLPGILDREYYTNSFHIPVYYNISAARKIELEAKFHGLCNA 556 Query: 604 GFICYGEY-PNIQHNLKALEDVWDYSY-QHVPYYGTNTPIDECYECGFTGEFECTSKGFT 661 G I Y E N ++N +A + Y+ Q V Y+ N PID C CGF G G + Sbjct: 557 GAISYIELNGNARNNPEAFVKIVQYALQQQVSYFSINHPIDRCSACGFEGII-----GAS 611 Query: 662 CPKCGNHDAS-RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLG 707 CP CG+H++ + RRV GYL FN KQ EV+ RVKH Sbjct: 612 CPSCGSHESEVHIRRLRRVTGYLTGDYQTRFNPAKQAEVRDRVKHDA 658 >UniRef50_Q0W698 Anaerobic ribonucleoside-triphosphate reductase (Glycyl-dependent) n=2 Tax=Archaea RepID=Q0W698_UNCMA Length = 780 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 160/735 (21%), Positives = 295/735 (40%), Gaps = 74/735 (10%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDINE 60 +V G PF + I+ ++++ + VA V +++ N + Sbjct: 91 MYVRTSRGTLEPFDYKMIENSLVKET----GITQESAMHVAKEVEAKLRKLKVNYLSAPL 146 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 I+ V QL+ ++ Y G ++ L+EQ + ENAN Sbjct: 147 IREIVTVQLLEEGLEEARSKYTRL-----------GMPVHDVTHLIEQGS----KENANL 191 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 + + + Y +LP+ + AH RGDIH HD DY P NC+ DL Sbjct: 192 HHNPETIHK-FAGDQILREYLLVQVLPKHIADAHMRGDIHIHDADYFAVRP--NCLQHDL 248 Query: 181 KGMLTQGFKMG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 G ++ + PPK A A+I+A +++ GG +++ + +APF Sbjct: 249 SWFFENGLRVDGTGKHTSVAAPPKHAMVAALHAAKILASSQTNMAGGQSLDNFNIFMAPF 308 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT--- 292 T + K + + + +R + F +++ E+ + Sbjct: 309 FTGMSREEVKQVAQAFVYEMNMQYVARGGQVV---FSNVDIELTIPKYLADKPAIGPKGK 365 Query: 293 -FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQ 351 G E +++L I G K +FP ++ RD ++ Sbjct: 366 VMGTYKDYQDELYTFTDALLDVFIDGDALG-KPHLFPNVIVKTRDSAFKDPQQK--ELLF 422 Query: 352 LALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGV-WENENGEQIH----DGRNNL 406 + SK P ILN + MGCR+ L W ++ G + N+ Sbjct: 423 KVHQLFSKYGTPYILNM--LPDWQHDAVNSMGCRTRLSGDWADKQGYENPGMSTMRTGNI 480 Query: 407 GVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEG--VKARVAPILYMEG 464 ++NLPRIALEA G++ +++LD RL L R+AL + ++ + ++ P L +G Sbjct: 481 HYNTVNLPRIALEANGNDGKIFEILDSRLDLIREALEIKHDLVKKRLYENQILPFLTQKG 540 Query: 465 ACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERL 524 G + ++ + ++G++G++E + A G +++++ G+ ++ + Sbjct: 541 RHG---------EDYYRFEDLTHTVGFVGLNELVQAHTG-SMLHESQDAYDFGMDVIRYM 590 Query: 525 RQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGV---VPGVTDKG--YYTNSFHL 579 R D + TG+ ++L TP+E+ RF RLD FG V G + G YYTNS H+ Sbjct: 591 RDWADSLSDITGWRWTLTQTPAESTAGRFARLDMKAFGARALVHGDRNTGGVYYTNSSHM 650 Query: 580 DVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH--VPYYGT 637 V+ ++ +D+ E + P+ NGG I + + L + + ++ + + Sbjct: 651 PVDADISLFDRAKMEGKFHPVCNGGHITHLFLGEGTPDPAGLMSLTEKLCRNTSMGLFDY 710 Query: 638 NTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSP----DARPFNA 693 + C +CG +CP C N + + R+ GY A +N Sbjct: 711 TRDLTTCRKCG----TVAGGLLNSCPNC-NANGKDLEYYSRITGYCQRIGSGDSAGGWND 765 Query: 694 GKQEEVKRRVKHLGN 708 K E++ R ++ N Sbjct: 766 AKIAELRDRKRYCIN 780 >UniRef50_A5UN10 Anaerobic ribonucleoside-triphosphate reductase, NrdD n=5 Tax=Methanobacteriaceae RepID=A5UN10_METS3 Length = 776 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 164/723 (22%), Positives = 296/723 (40%), Gaps = 66/723 (9%) Query: 3 PHVMK-RDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V RD F +I ++ A++ + +A V ++++ ++++ + Sbjct: 97 LKVRTSRD-TIEAFDLSKIANTLIEETGASQ----ETAFEIATEVWKELK---KLNVEYL 148 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 + ++++ + D + G I L+E N NAN Sbjct: 149 TAPMIREMVNTKLVEY------GLEDLRSRYTRLGIPVYNITSLIENGNRD----NANMI 198 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 + +A K YA +LP + AH GDIH HDL++ P+ NCM D++ Sbjct: 199 HNPESIHKH-VADEALKQYALLQMLPSHLADAHMSGDIHIHDLEFFAGRPL-NCMQHDIR 256 Query: 182 GMLTQGFKMG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 + G K+ + P + T T +I+ ++ GG ++ + +APF Sbjct: 257 TFIKYGLKVDGTGDHTSVAGAPNHMETLMNHTGEIMLASQQNMSGGQAMSLWNVFVAPFA 316 Query: 237 TASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT---- 292 + K + + I + +R + F S+ E T + Sbjct: 317 RGRTYEEIKQSVQMLIYNLNMAYAARGSQV---PFTSMVLEFGVPKFLQDVTAYGPKGQV 373 Query: 293 FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQL 352 G E+RLIQ++ +AG + K +FP ++ +R+ KGD D+ L Sbjct: 374 VGTYGDFEEETRLIQKAFTETLLAGDQEG-KPHLFPNTIYTLRE--ETLKGDYEEDLH-L 429 Query: 353 ALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLN 412 E ++K +N + G MGCR+ L + EQ NL ++LN Sbjct: 430 VHELSAKYGSSYFINM--LPDYRGKMANYMGCRTCLQDNWTGDWEQDCLRTGNLAYVTLN 487 Query: 413 LPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNA 472 LPRI ++K DE+ ++ LDE + LA + LM R + + +++ G Sbjct: 488 LPRIGYQSK-DESQVFEYLDEYMDLAAETLMLRREQGLKCLNDFHILPFLKQKVGE---- 542 Query: 473 DDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK 532 ++ +++S G++G++E + +LFG +++ G+ +E L + D+ K Sbjct: 543 ----DSYYRIQNSTLSFGFVGLNEMLLSLFGK--GIEDKDANKFGVKCIEYLNERADKLK 596 Query: 533 EETGYGFSLYSTPSENLCDRFCRLDTAEFG---VVPGVTDKGYYTNSFHLDVEKKVNPYD 589 EETG +S+ TP+E+ RF LD +FG +V G YYTNS H+ V V+ D Sbjct: 597 EETGLRWSVLQTPAESTAYRFATLDKEQFGDQAIVQGDGSANYYTNSSHVPVNTDVSLID 656 Query: 590 KIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYS--YQHVPYYGTNTPIDECYEC 647 KI E Y L GG I + + +L + + + ++ ++ + C C Sbjct: 657 KIKIEEQYHSLTPGGHIFHAFMGESYSDPDSLMSLTNKIAKKSDIGFWAYSSALSFCLNC 716 Query: 648 GFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSP-----DARPFNAGKQEEVKRR 702 + CP CG ++ V R+ GY+ + +N GK++E+ R Sbjct: 717 ----KTLMKGLNNKCPTCG--ESEDVEWYDRITGYVQQVGRAKSSSGGWNPGKRQELIDR 770 Query: 703 VKH 705 + Sbjct: 771 RRF 773 >UniRef50_UPI0001C41C69 anaerobic ribonucleoside-triphosphate reductase NrdD n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41C69 Length = 780 Score = 538 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 160/725 (22%), Positives = 291/725 (40%), Gaps = 68/725 (9%) Query: 2 TPHVMK-RDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 T V RD PF +I ++ A++ + +A+ V ++++ ++++ Sbjct: 101 TLKVRSSRD-KIEPFDMAKIASTLVEETGASQ----ETAFEIASEVWKELK---KLNVEY 152 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 + + ++++ + D + G I L+E N NAN Sbjct: 153 LTAPMIREIVNTKLVEY------GLEDLRSRYTRLGIPVYNITSLIENGNRD----NANM 202 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 + +A K YA HLLP + AH GDIH HDL++ P+ NC+ D+ Sbjct: 203 MHNPESIHKY-VADEALKQYALLHLLPSHLADAHMSGDIHIHDLEFFAGRPL-NCLQHDI 260 Query: 181 KGMLTQGFKMG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 + + G K+ + PP + T T +I+ ++ GG ++ + +APF Sbjct: 261 RAFIKYGLKVDGTGDHTSVAAPPSHMETLMNHTGEIMLAAQQNMSGGQAMSLWNVFVAPF 320 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT--- 292 + K + + + + +R + + + Q E + T + Sbjct: 321 ARGRTYEEVKQSIQMLVYNLNMAYAARGSQVPFTSMQ---LEFGVPNFLKDVTAYGPKGQ 377 Query: 293 -FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIR-DGLNHKKGDPNYDIK 350 G E+R+IQ + + G + K +FP ++ +R + LN D Sbjct: 378 VVGTYADFEDETRMIQRAFTEILLEGDSEG-KPHLFPNTIYTLREETLNGDYDDD----M 432 Query: 351 QLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVIS 410 L E ++K +N + G MGCR+ L + EQ NL ++ Sbjct: 433 LLVHELSAKYGSSYFVNM--LPDYRGQMANYMGCRTCLQDTWTGDWEQDCLRTGNLAYVT 490 Query: 411 LNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRL 470 LN+PRI ++ DE ++ LD + LA + LM R + + + L Sbjct: 491 LNMPRIGYQSN-DEDDVFEYLDNYMDLAVETLMIRRKQGLNCLNNFDILPF--------L 541 Query: 471 NADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQ 530 + + D ++ +++S G+ G++E + ALF + +N GI +E + Sbjct: 542 DQEVDGETYYRIQNSTLSFGFCGLNEMLLALF--DEGIENPDANKFGIKCLEYINARAKA 599 Query: 531 WKEETGYGFSLYSTPSENLCDRFCRLDTAEFG---VVPGVTDKGYYTNSFHLDVEKKVNP 587 +EETG +S+ TP+E+ RF LD +FG ++ G YYTNS H+ V + Sbjct: 600 LQEETGLRWSVLQTPAESTAYRFATLDKEQFGDKAILQGDNGANYYTNSSHVPVNSDIAF 659 Query: 588 YDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYS--YQHVPYYGTNTPIDECY 645 DKI E Y L GG I + + +AL + + + ++ ++ C Sbjct: 660 ADKIKIEGQYHKLTPGGHIFHAFMGESYSDPEALMSLTNKIARKSDIGFWAYSSAFSFCL 719 Query: 646 ECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPD-----ARPFNAGKQEEVK 700 C + CP CG +++ V R+ GY+ +NAGK++E+ Sbjct: 720 NC----KTLMKGLSNKCPSCG--ESADVEWYDRITGYVQQVGHAKSANGGWNAGKRQELI 773 Query: 701 RRVKH 705 R + Sbjct: 774 DRRRF 778 >UniRef50_A4FZY4 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Methanococcales RepID=A4FZY4_METM5 Length = 791 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 152/710 (21%), Positives = 289/710 (40%), Gaps = 68/710 (9%) Query: 13 VPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSG 72 PF E+I +A+++ A A D +A V +++ + +N + + ++++ Sbjct: 123 EPFNKEKIVKALIQEAGA----DIKTAERIAVEVESEVKN---LTVNYLTAPMIREIVNT 175 Query: 73 PYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLL 132 + + + + G +I L+E+ + NAN + + Sbjct: 176 KLIE------HGLEEFRHKHTRLGIPVYDIVKLIERGSKD----NANLMHNPESIHK-WV 224 Query: 133 AGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMG- 191 A K +A ++ P+ + +H +GDIH HDL+Y+ + C DL+ G K+ Sbjct: 225 ADETMKQFALLNVFPKYIADSHMKGDIHLHDLEYAAVRTV--CCQHDLRNFFKHGLKVDG 282 Query: 192 ----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTA 247 + +P K A A++++ + GG +I+ + LAP++ + Sbjct: 283 TGRHTSVSKPAKHPDVALQHAAKVLSAAQCEMSGGQSIDEFNIWLAPYMRGLDYNEVRQL 342 Query: 248 EEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT---FGFGLGTSWESR 304 + I + +R + F S+ E+ G+ G +E + Sbjct: 343 MQLFIYEMNQIYAARGGQVV---FSSINLELEVPEFLKGEDAIKAGKVVGAYEEYDYEVK 399 Query: 305 LIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPD 364 LI E+++ + G K +FP ++F +R+ D N D+ E ++K P Sbjct: 400 LIAEALVDVLMDGDAYG-KPFLFPNVIFKLRENAFK---DENKDLMIKIHELSAKWGLPY 455 Query: 365 ILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDE 424 +N + + MGCR+ L + E+ N+ +LNLPRIA EA GD+ Sbjct: 456 FINMLADYQYGNT--NAMGCRTRLSGEWGNSIEESSLRTGNMQWYTLNLPRIAYEADGDD 513 Query: 425 ATFWKLLDERLVLARKALMTRIARLEG--VKARVAPILYMEGACGVRLNADDDVSEIFKN 482 +++LDE+L LA+ AL + + V P L E D + ++ Sbjct: 514 GRLFEILDEKLSLAKHALEIKHDISKRRLYHDNVLPFLTQE----------FDGEQYYRY 563 Query: 483 GRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLY 542 + + G++G++E + G ++++ + A GI ++ +R+ D K+ETG +++ Sbjct: 564 DSTTKTFGFVGLNELLKYHVG-SELHESPEALAFGIKVISHIRKYADDLKKETGLRWTVT 622 Query: 543 STPSENLCDRFCRLDTAEFGV--------VPGVTDKGYYTNSFHLDVEKKVNPYDKIDFE 594 TP+E+ RF + D + YYTNS H+ V V +K++ E Sbjct: 623 QTPAESTAGRFAKFDHKYYPEETKSVVNGDLSDLSSIYYTNSSHVKVNADVTLGEKVNIE 682 Query: 595 APYPPLANGGFICYGEYPNIQHNLKALEDVWDYS-YQHVPYYGTNTPIDECYECGFTGEF 653 + L NGG I + N + L D+ + ++ + C +C Sbjct: 683 EKFHELCNGGHIGHFWNAEAYANPEVLMDITRKMTKTDIGFWTYTKNLSICEKCS----L 738 Query: 654 ECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRV 703 + C CG+ + + R+ GYL + +N KQ E+ R Sbjct: 739 AMSGLKDNCTGCGSENVEKF---SRITGYLQNVS--NWNKAKQRELIDRK 783 >UniRef50_D1Z2H8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Euryarchaeota RepID=D1Z2H8_METPS Length = 791 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 155/731 (21%), Positives = 291/731 (39%), Gaps = 67/731 (9%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V G F + I++++++ A + + V+ V ++ ++ +N + Sbjct: 102 MFVRTSKGTLERFDPKFIEDSLIKEADLS----REVAGHVSKEVEGKL---RKLKVNYLT 154 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 + ++++ + E D + + G ++ L+E + ENAN Sbjct: 155 APLIREIVTVQLLE------EGLEDARSQYTRLGMPVYDVTQLIEHGS----RENANLHH 204 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182 + + + Y +LPR + AH RGDIH HD DY P NC+ DL Sbjct: 205 NPETIHK-FAGDQILREYLLVKILPRHITDAHLRGDIHLHDADYFAIRP--NCLQHDLSW 261 Query: 183 MLTQGFKMG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 G ++ + PPK A A+I+A +++ GG +++ + +APF T Sbjct: 262 FFQNGLRVDGTGNHTSVAAPPKHAMVAALHAAKILASSQTNMAGGQSLDNFNVFMAPFFT 321 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVT----F 293 K + + + +R + F ++ E+ + Sbjct: 322 GMSYDEVKQVAQAFVYEMNMQYVARGGQVV---FSNVNIELTVPPFLRDEPAIGPKGKVV 378 Query: 294 GFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLA 353 G E ++ E++L + G + K +FP + +RD ++ Sbjct: 379 GTYGDFEDELQVFTEALLDVFLDGDARG-KPHLFPNTIVKVRDSAFKDP--KQQEMLLKV 435 Query: 354 LECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGV-WENENGEQIH----DGRNNLGV 408 SK P ILN + K MGCR+ L W + G N+ Sbjct: 436 HYLFSKYGTPYILNM--LPKWQHGAVNSMGCRTRLSGDWADRQGYTNPRYSTMRTGNIHY 493 Query: 409 ISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGV 468 +LNLPRIA+EA GD+ +++LD+RL L R++L + +E LY Sbjct: 494 NTLNLPRIAIEANGDDNKVFEILDQRLDLIRESLEIKHELIERR-------LYDNKLLPF 546 Query: 469 RLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAV 528 + ++ + ++G++G++E G ++++ G+ +++ +R Sbjct: 547 LTQKGQSGEDYYQFKDLTHTVGFVGLNEFTKIHIGK-GLHESRDAYDFGMDLIKYMRDWA 605 Query: 529 DQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG---VVPGVTDKG--YYTNSFHLDVEK 583 + E T + ++L +P+E+ RF +LD EFG +V G +KG YYTNS HL+V+ Sbjct: 606 EFRTEMTDWRWTLTQSPAESTSGRFAKLDLREFGDRAIVKGDKEKGNVYYTNSSHLEVDA 665 Query: 584 KVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH--VPYYGTNTPI 641 V +++ E + P+ NGG I + N + L + + ++ + + + Sbjct: 666 DVPMFERARLEGEFHPVCNGGHITHLFLGEGTPNPEGLMSLTEKLCRNTSMGLFDFTRDL 725 Query: 642 DECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYL-----GSPDARPFNAGKQ 696 C C +CP CG A+ + R+ GY G +N K Sbjct: 726 TTCKACA----TVSGGLQKSCPNCGATGAA-LEYYSRITGYCQRIGSGESTTGGWNDAKV 780 Query: 697 EEVKRRVKHLG 707 E++ R ++ Sbjct: 781 AELRDRRRYCI 791 >UniRef50_B8G1P5 Anaerobic ribonucleoside-triphosphate reductase n=37 Tax=Bacteria RepID=B8G1P5_DESHD Length = 789 Score = 520 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 200/794 (25%), Positives = 336/794 (42%), Gaps = 92/794 (11%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ---GRNQVD 57 M + KRDG + PF E+I AI +AA A D +A V ++ + Sbjct: 1 MITKIRKRDGREAPFNIEKIANAIFKAASATGGKDYQSSLLLAEEVVNYLEVNLHKKVPS 60 Query: 58 INEIQTAVENQL------------------------MSGPYKQLARA--YIEYRHDRDIE 91 + EIQ AVE L M ++ + E + + Sbjct: 61 VEEIQDAVEKILIERGHARTAKEFILYRAERTRVREMDTRLMKVYEELTFKEAKDNDMKR 120 Query: 92 REKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHL------ 145 + + ++ + N K ++ I L Sbjct: 121 ENANIDGDTAMGTMLRYGSEGAKQFNEMFVLKPEHSKAHKEGDIHIHDMDFLTLTTTCCQ 180 Query: 146 --LPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI-DLKGMLTQGFKMGNAEIEPP---- 198 + + + G + + + C+ I + G + N + Sbjct: 181 IDIIKLFKEGFGTGHGFLREPNDIQSYSALACIAIQSNQNDQHGGQSIPNFDYGMAPGVA 240 Query: 199 --------KSISTAT--------------AVTAQIIAQVASHIYGGT---TINRIDEVLA 233 +++ A A + + +A+ + T + ++ A Sbjct: 241 KTYIKLYRQNLLKACELLIHQDVDQEELEAHLKDVFSALANQGHTPTLSSDPDYFEQEAA 300 Query: 234 PFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLH-TANGQTPFVT 292 T K A A + T K+ Y A ++L + +NT+H A Q PF + Sbjct: 301 LLQTLPNLKLDMPTIRKAQEFAVKKALAETDKKTYQAMEALVHNLNTMHSRAGAQIPFSS 360 Query: 293 FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQL 352 +G T+ E R++ +++L AGLG +T +FP +F +++G+N+ DPNYD+ QL Sbjct: 361 LNYGTDTTPEGRMVVKNLLLATEAGLGNG-ETPIFPIHIFKVKEGVNYNPSDPNYDLFQL 419 Query: 353 ALECASKRMYPDILNYDQVVKVTGSF-------KTPMGCRSFLGVWENENGEQIHDGRNN 405 A ++KR++P+ D + MGCR+ + + + GR N Sbjct: 420 ACRVSAKRLFPNFSFIDAPFNLQYYVPGRPETEIAYMGCRTRVIGNIYDPSRETIFGRGN 479 Query: 406 LGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGA 465 L ++NLPR+A+++ F+ +LDE++ L L+ R K + P L +G Sbjct: 480 LSFTTINLPRLAIKSHQSRTEFFAMLDEKIDLVINQLLERFEIQARKKVKNFPFLMGQGI 539 Query: 466 C--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVER 523 +L DD++ E+ K+G ++S+G+IG+ E + L G H ++E+ R G+ IV++ Sbjct: 540 WLDSDQLGWDDEIREVLKHG--TLSMGFIGLAECLMVLTGQHHG-ESEEARELGLEIVQQ 596 Query: 524 LRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEK 583 LR+ +D+ E G FSL +TP+E L RF ++D FG +PG+TDK YYTNSFH+ V Sbjct: 597 LRRRMDEAGREYGLNFSLLATPAEGLSGRFIKMDRELFGSIPGITDKEYYTNSFHIPVSF 656 Query: 584 KVNPYDKIDFEAPYPPLANGGFICYGEY-PNIQHNLKALEDVWDYSYQ-HVPYYGTNTPI 641 ++ + KI EAPY L N G I Y E + NL+A E + + + + N P+ Sbjct: 657 PISAFHKITIEAPYHELTNAGHITYVEVDGDPTQNLEAFEKIVRCMKESGIGFGAVNHPV 716 Query: 642 DECYECGFTGEFECTSKGFTCPKCGNHDA-SRVSVTRRVCGYLGSPDARPFNAGKQEEVK 700 D CG+TG G CP+CG ++ + RR+ GYL R FN K+ EV+ Sbjct: 717 DRDPVCGYTGII-----GNECPRCGREESTAPFERIRRITGYLVGTLDR-FNDAKKAEVR 770 Query: 701 RRVKH--LGNGQIG 712 R+KH + IG Sbjct: 771 DRIKHLNCLDSSIG 784 >UniRef50_A8F4B5 Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=cellular organisms RepID=A8F4B5_THELT Length = 589 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 117/642 (18%), Positives = 233/642 (36%), Gaps = 85/642 (13%) Query: 99 NQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGD 158 + + + EN+N + + ++ + Y + + + +AH GD Sbjct: 1 MKNMVEQYLLLKDWRIRENSNMNYSLQGLNNHIV-SEITSDYWLKCVYTEKISKAHMEGD 59 Query: 159 IHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMG--NAEIEPPKSISTATAVTAQIIAQVA 216 H HDL+ C DL+ +L GF E +PP+ A + Sbjct: 60 FHIHDLNLLA----PYCCGWDLRDLLINGFGGVDQKIESKPPRHFRVALMQIVNFFYTLQ 115 Query: 217 SHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY 276 G + +D +LAPF+ + + +E Q + Sbjct: 116 GEAAGAQAFSNVDTLLAPFI---------------------AYDKLSYQEVVQCLQEFVF 154 Query: 277 EVNTLHTANGQTPFVTFGF-----------------------GLGTSWESRLIQESILRN 313 +N QTPFV E + ++ Sbjct: 155 NLNVPTRVGFQTPFVNITMDVVVPKYMANEPVIVGGQFQEKTYGEFQQEMDMFNKAFCEV 214 Query: 314 RIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVK 373 + G + + FP + + + ++ + L+ +K P N+ Sbjct: 215 MLEGDARG-RVFSFPIPTYNVTGNFPWES-----EVGYMILQMTAKYGIPYFANFVSSGL 268 Query: 374 VTGSFKTPMGCRSFLGVWENENGEQIHDG----RNNLGVISLNLPRIALEAKGDEATFWK 429 ++ M CR L E G ++GV+++N+PRI + G E F+K Sbjct: 269 SPEDVRS-MCCRLRLDNRELYIRGGGLFGANPMTGSIGVVTINMPRIGYLS-GTEEEFFK 326 Query: 430 LLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISL 489 L+ + +A+++L+ + +E LY ++ + + N ++ + Sbjct: 327 RLNSIMEIAKESLIVKRNAIEKFTE---WGLYPYSKVCLK-KVKKFFGQYWHNHFST--I 380 Query: 490 GYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENL 549 G +G+HE + F + D + + + +++ +R+ + +++ETG F+L +TP+E Sbjct: 381 GLVGMHEALMNFF--KRGIDTPEGKTFAMRVLDFMREKLLIFQQETGTLFNLEATPAEGA 438 Query: 550 CDRFCRLDTAEFGVV-PGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY 608 R +LD F + ++ YYTNS L V + + + + GG + + Sbjct: 439 SYRLAKLDKECFKNIYTSGENEPYYTNSTQLPVNYTDDLFRALQIQEDLQLKYTGGTVFH 498 Query: 609 GEYPNIQHNLKALEDVWDYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCG 666 + +L + +++ +PY C + G+ G + ++CP CG Sbjct: 499 IFLGEKVEDAYSLGALIKRIFENYRLPYITVTPTFSICRDHGYIG-----GEEYSCPVCG 553 Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGN 708 V RV G+ + +N GK+EE RV ++ N Sbjct: 554 QP----TEVWSRVVGFYRPV--QNWNPGKREEFIHRVNYVVN 589 >UniRef50_B3E035 Ribonucleotide reductase of class III (Anaerobic), large subunit n=3 Tax=cellular organisms RepID=B3E035_METI4 Length = 611 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 141/663 (21%), Positives = 235/663 (35%), Gaps = 92/663 (13%) Query: 88 RDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLP 147 +D ++ ++ + + ++ + EN+N + L+ ++K Y Q + P Sbjct: 2 QDSPLDESLEPSKLVDDYLSRSC-WEIKENSNMSYS-LQGLNFYLSSKISKSYWLQKIYP 59 Query: 148 RDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKM--GNAEIEPPKSISTAT 205 +V +A ERGD H H+L CM DL L +GF G E PP STA Sbjct: 60 PEVKEAFERGDFHIHNLQVLGV----YCMGWDLADFLAKGFMGVEGRMESGPPLHFSTAL 115 Query: 206 AVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIK 265 + G + D +LAPF+ K K Sbjct: 116 NQVVNFFYTLQGEAAGAQAFSNFDTLLAPFIRYDNLKE---------------------K 154 Query: 266 ECYDAFQSLEYEVNTLHTANGQTPFVTFGF-----------------------GLGTSWE 302 E Q + +N Q PF E Sbjct: 155 EIRQLLQQFLFNLNVPTRVGFQAPFTNLTLDLNPPHFLQNEAVLIGGKIKKETYGEFQPE 214 Query: 303 SRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMY 362 ++ + G + + FP + I K + +K Sbjct: 215 IDILNRLFCEVFLEGDARG-RVFTFPIPTYNITSQFPWK-----GPAADALWKMTAKYGI 268 Query: 363 PDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDG----RNNLGVISLNLPRIAL 418 P N+ ++ M CR L + + G ++GV+++NLPRI Sbjct: 269 PYFANFINSDLKVDDVRS-MCCRLRLDLTQLLRRGGGLFGSNPLTGSIGVVTINLPRIGF 327 Query: 419 EAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSE 478 +K EA F + L E + LA+KAL + LEG A+ LY ++ Sbjct: 328 LSK-SEAEFLERLQELMELAKKALEAKRKALEGWIAKG---LYPYSKFYLK-GVYQRFGA 382 Query: 479 IFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYG 538 + N ++ +G IG++E G + + +A I +++ LR + +++ET Sbjct: 383 YWANHFST--IGIIGMNEACLNFMGKS--IADPEGKAFAIKVLDTLRGTLLAFQKETQNN 438 Query: 539 FSLYSTPSENLCDRFCRLDTAEFGVVPGVTDK-------GYYTNSFHLDVEKKVNPYDKI 591 ++L +TP+E R R+D A F + ++ +YTNS L V +P+ + Sbjct: 439 YNLEATPAEATSYRLARIDKAMFPAIRVANEEAVKKGAAPFYTNSTQLPVHFTTDPFVAL 498 Query: 592 DFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDY--SYQHVPYYGTNTPIDECYECGF 649 + + GG + + +++ S +PY+ C E G+ Sbjct: 499 EHQEELQSRYTGGTVLHFFLGQKIDEPQSIPPFVQAVCSKYKIPYFTLTPTFSICPEHGY 558 Query: 650 TGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNG 709 + + CP+CG V RV GYL D +N GKQEE K R N Sbjct: 559 -----LSGEQSRCPRCGKP----CEVYSRVVGYLRPLDQ--WNPGKQEEFKLRKTFQFNE 607 Query: 710 QIG 712 G Sbjct: 608 NRG 610 >UniRef50_C5H7Q4 Anaerobic nucleoside diphosphate reductase n=3 Tax=unclassified Myoviridae RepID=C5H7Q4_9CAUD Length = 714 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 214/727 (29%), Positives = 347/727 (47%), Gaps = 46/727 (6%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAE-------VDDADYCATVAAVVSEQMQGRNQV 56 ++K++G +++ A+ ++A V A A + +V Q + Sbjct: 5 QIIKKNGSLEEPDIKKVLAAVAKSANRVGYKELPPDVTQALESAFMRILVKSTKQNNLLI 64 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNE 116 +N+I + VE L + ++ +Y YR+ R + L Q+ + + + E Sbjct: 65 SVNDIHSIVEGALAEVNH-EIYESYSTYRNYRKEVAQNWDELYQKTKDTLFLGD----RE 119 Query: 117 NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 NAN DS +I T+ ++ G + K +Q+ L + ++A E+G I+ HDL F NC Sbjct: 120 NANFDSSLISTKGSIIRGYLTKEIFKQYHLTPEELEAIEKGFIYIHDLRDLIFGG-INCC 178 Query: 177 LIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 L D+ +L GF+M E PKS+ +A V ++ + +GG T+ ID+VL P+ Sbjct: 179 LFDIGKVLKGGFEMSGIEYCEPKSVLSALQVIGDVVLSATAQQFGGFTLAEIDKVLVPYA 238 Query: 237 TASYNKHRKTAEEWNIPD--AEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFG 294 S H + A + IP Y + E FQSLE ++NT+ + G F T Sbjct: 239 KKSLRYHAEKASSYGIPKEHYHNYVMEQLQIELTQGFQSLEMKLNTVPCSRGDFAFTTLT 298 Query: 295 FGL---GTSWESR----LIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNY 347 FGL S E +I ++L R+ G GK++K VFPKLV+ I D H + Sbjct: 299 FGLLDSDMSNEDNRLQYMIASTLLDVRMNGQGKSKKPVVFPKLVY-IYDQKRHDENICQG 357 Query: 348 DIKQLALECASKRMYPDILNYD------QVVKVTGSFKTPMGCRSFLGVWENENGEQIHD 401 + A+EC SK MYPD L+ + + +G +PMGCR+FL + NE+GE+ + Sbjct: 358 HLYSKAIECCSKAMYPDFLSVSGHGAVAEAFERSGKVISPMGCRAFLSPYFNEDGEEFYV 417 Query: 402 GRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILY 461 GR N+G +SLNLP I +K + FWK LD+ L + R R + + A P+ + Sbjct: 418 GRANIGAVSLNLPMIYQYSKENGLDFWKELDKYLEMIRNFHKKRYEMIANMPASSNPLAF 477 Query: 462 MEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIA 519 +G G + D +I K + S G + E ++ L G+ +++ + Sbjct: 478 TQGGLYKGTKKPTDKVGWDIVK--SFTASFGVTALDE-LSVLAEGKRLHEV-GSYSFTYD 533 Query: 520 IVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHL 579 ++ + +++K E G+ +++Y TP+E+LC + FGV+ GV+DK Y+TNSFH+ Sbjct: 534 VLAYINMKTEEFKNEDGFLYAVYGTPAESLCGTQLKQFRDMFGVIKGVSDKEYFTNSFHM 593 Query: 580 DVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNT 639 +V ++P++K D E P+ + GG I Y N + NL AL+ Y G N Sbjct: 594 NVAADISPFEKQDLEEPFFHICRGGRIQYVRVANPE-NLSALKSCITRGMLKGFYQGLNF 652 Query: 640 PIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARP---FNAGKQ 696 + C CG + + C C +HD +SV RVCGYLG + N K Sbjct: 653 DLAICEHCGNRPKADV----EECEVCHSHD---ISVINRVCGYLGWTKIKGESRMNDAKI 705 Query: 697 EEVKRRV 703 E++ RV Sbjct: 706 AEIRDRV 712 >UniRef50_C7NCJ9 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NCJ9_LEPBD Length = 762 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 194/740 (26%), Positives = 308/740 (41%), Gaps = 143/740 (19%) Query: 93 EKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQ 152 + L + I G+V + NENAN S Q A V+K YA ++L+ + Sbjct: 36 QLTENLREIISGIVNVESNDTCNENANMSSMTPAGQMMKFASEVSKIYALENLVSPKFKE 95 Query: 153 AHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQII 212 AHE+G IH HDLD+ C+ DL M GF + I +SIST + I Sbjct: 96 AHEKGLIHIHDLDFYS-SKTTTCLQYDLADMFEHGFYTKHGYIREAQSISTYATLATIIF 154 Query: 213 AQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGY-------------- 258 + +GG I D +A V S+ +H + + G Sbjct: 155 QTNQNEQHGGQAIPAFDFYMAKGVLKSFRRHLRRRILSFVEIKNGVEITKEYENNAKEFL 214 Query: 259 ----------------------------------ANSRTIKECYDAFQSLEYEVNTLHTA 284 A T E Y A + + +NT+H+ Sbjct: 215 LKNIFSIKCSENEIKLLEENFGINKNDLIKLLLEAYEDTKNETYQAMEGFLHNLNTMHSR 274 Query: 285 NG-QTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKG 343 G Q F + +G TS E R++ +L+ +GLGK+ +T +FP +F +++GLN+ + Sbjct: 275 GGNQVVFSSINYGTDTSEEGRMVIRELLKATSSGLGKS-ETPIFPIQIFKVKEGLNYTEN 333 Query: 344 D-----------------------------------PNYDIKQLALECASKRMYPDILNY 368 D PN+D+ L+ E +S+R++P+ + Sbjct: 334 DYNLAQSDFDTALESVKNQKISYENDSENEKIKFEAPNFDLLLLSCETSSRRLFPNFVFL 393 Query: 369 DQVVKVTGSFK-----------TPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIA 417 D ++ MGCR+ V+EN NGE+ GR NL S+N PRIA Sbjct: 394 DSEFNKHEKWRIDDPERYKYEIATMGCRTR--VFENINGEKSSLGRGNLSFTSINFPRIA 451 Query: 418 LEAKGDEAT----------------------------FWKLLDERLVLARKALMTRIARL 449 + + + F + + E LA + L R Sbjct: 452 IITRKNVEKEIAEMEKAGKFLNEEEKNNKKIELLTKEFQEKVLETTHLAGEQLYERYNFQ 511 Query: 450 EGVKARVAPILYMEGACGVR--LNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHV 507 + A+ P + + +++V E +G S+S+G++G + ALF EH Sbjct: 512 KTALAKQFPFMRSNNLWKGLGVKDGNEEVREAINSG--SLSIGFVGGANAMYALFDAEHG 569 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGV 567 +E ++++ D+++E+ +S+ +TP+E+L RF R+D EFGV+ V Sbjct: 570 -TSEIAYKVLYDTIKKMGFVADEFREKYHLNYSILATPAESLAGRFLRIDRNEFGVIKNV 628 Query: 568 TDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEY-PNIQHNLKALEDVWD 626 TD+ YY NSFH+DV+K+++ +DKI EAP+ L GG I Y E + N+ + + Sbjct: 629 TDRDYYVNSFHIDVKKEISLFDKIRKEAPFHKLTKGGHITYVELDGEARKNMGVMLKIVK 688 Query: 627 YSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGS 685 + Y N P+D C +CG CP CG+H+ +S RR+ GYL Sbjct: 689 VMKDTGIGYGSINHPVDRCRDCGTEAIIY-----DKCPICGSHN---ISRIRRITGYLTG 740 Query: 686 PDARPFNAGKQEEVKRRVKH 705 D +N+ KQ E RVKH Sbjct: 741 -DLDSWNSAKQAEEHDRVKH 759 >UniRef50_D1B9B6 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9B6_THEAS Length = 709 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 142/718 (19%), Positives = 273/718 (38%), Gaps = 73/718 (10%) Query: 10 GCKV--PFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDINEIQTAV 65 G + + RIK A++ A+ D + A++A+ V + + GR++V I+ V Sbjct: 38 GHEERYEWDPVRIKNALILEAQ----VDPEVAASIASEVEDDIVRYGRDRVTTRLIREMV 93 Query: 66 ENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVI 125 +L + + + G ++ ++ + N EN+N Sbjct: 94 NVKLFQRGL-----------DAKLADHSQVGLPVSDLETMLLKPN----KENSNTTHNPE 138 Query: 126 PTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLT 185 +A V K Y+ + DV AH GDIH HDL C + + Sbjct: 139 SINLS-IAERVLKEYSLSKVFSPDVASAHLNGDIHLHDLGMVN---RPYCSGQSIAYVAR 194 Query: 186 QGFKMG--NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKH 243 G + + P K A ++ + + ++ G + ++ AP++ + ++ Sbjct: 195 YGLNIPSITSVSAPAKHADVLLAHVLKMTSVLQNNFAGAIGWDAVNMFFAPYMVGATDRQ 254 Query: 244 RKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF-----GLG 298 K + I + A R + AF + + G Sbjct: 255 YKQLAQQLIFEFNQLAGGRGGQV---AFTDINLYYEIPNHFRDVPAIGPGGEFTGKTYGE 311 Query: 299 TSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECAS 358 ES+ +++ + G + + FPK + I D + G + +LA AS Sbjct: 312 YDQESKKFLKALFEVYLEGDSRG-QPFFFPKPLLHITDYFFKEPGWE--EFLELACRVAS 368 Query: 359 KRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIH---DGRNNLGVISLNLPR 415 ++ + G K CR + E + E L +++NLPR Sbjct: 369 EKGNTYFVF-----DRGGVAKLSECCRLSFELSEEDLREAHQPWKMRYCALQNVTINLPR 423 Query: 416 IALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDD 475 +A AKGD+ + L+D+ + L+ KA M + A ++ + L G L D D Sbjct: 424 LAYRAKGDQEVLFDLVDQYMELSAKAHMQKRAFIKEILD-----LGKRGPLSA-LCVDHD 477 Query: 476 VSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEET 535 + +AS +G +G++E + + G +++++ +++++ + DQ E Sbjct: 478 GEAYLRFHKASHLIGILGVNEMVQVMTG-HELHEDKGALDLALSVIKYMELKCDQLSERY 536 Query: 536 GYGFSLYSTPSENLCDRFCRLDTAEFGV-----VPGV--TDKGYYTNSFHLDVEKKVNPY 588 G L TP+E+ RF +LD F + G T++ YYTNS HL+ ++P Sbjct: 537 GVKMVLEQTPAESTAHRFAKLDLKTFPEEASRVIKGDFRTNEIYYTNSTHLNYHLALDPI 596 Query: 589 DKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVP--YYGTNTPIDECYE 646 ++ E + P+ G + + + + ++L + + H + C Sbjct: 597 QRVVEEGMFHPMIKAGALTHVWMGEHKPDPRSLSSLVQKIFHHSENAQVAFSPEFTVCNS 656 Query: 647 CGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVK 704 C +CP CG+ D + R+ GY + +NAGK+ E++ R + Sbjct: 657 C----NRVHRGLFESCPTCGSADVDGI---TRITGYFTRTSS--WNAGKRGELRDRSR 705 >UniRef50_C3RPW0 Anaerobic ribonucleoside-triphosphate reductase n=18 Tax=Bacteria RepID=C3RPW0_9MOLU Length = 718 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 202/740 (27%), Positives = 352/740 (47%), Gaps = 61/740 (8%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAA----KAAEVDDADYCATVAAVVSEQMQGRNQV 56 M V+ ++ F +I A+ ++A K+ + D + E +Q ++ Sbjct: 1 MELIVIGKNNQHKKFNKNKILSAVQKSAERLNKSLSKEQEDRLIYLVLRNIENLQI-TEI 59 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNE 116 ++ + VE L K +A +Y YR+ ++ ++ + Q N L E Sbjct: 60 PVSTMHKIVEVSL-DDIDKDIATSYRNYRNY----KQDFVKMLDNVYKQSVQINYVRLKE 114 Query: 117 NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 NAN DS ++ T++ L+ + K + + L ++A E G I+ HD S NC Sbjct: 115 NANMDSALVSTKKTLVGNALGKEFYIKEFLNESEIEACEDGYIYIHD--MSSRLDTMNCC 172 Query: 177 LIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 L D+ +L+ GF+MGN PK++ A V II+ A+ YGG T+ +D++L + Sbjct: 173 LFDMDTVLSGGFEMGNRWYNEPKTLDVAFDVIGDIISSTAAQQYGGFTVPEVDKILEKYA 232 Query: 237 TASYNKHRKTAE-------------EWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHT 283 S+NK+ + + + YA +T +EC +Q +EY++N++ + Sbjct: 233 QKSFNKYLEEYLSIVQSLLKDTDKKQQFLAKGLQYAYKKTQEECRQGYQGIEYKLNSVSS 292 Query: 284 ANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNR--KTAVFPKLVFAIRDGLNHK 341 + G PFVTF FGL S ++I ++IL G GK+ +FPKLVF L H Sbjct: 293 SRGDYPFVTFTFGLSKSLLGQMISKTILNVHRIGQGKDGYKTPVLFPKLVFLYDKNL-HG 351 Query: 342 KGDPNYDIKQLALECASKRMYPDILNY------DQVVKVTGSFKTPMGCRSFLGVWENEN 395 K Y++ + AL C+SK MYPD L+ + K +PMGCR+FL W Sbjct: 352 KDKELYEVYKTALLCSSKTMYPDWLSLTGEGYVSNIYKKYRKVISPMGCRAFLSPWYERG 411 Query: 396 G--------EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 G I+ GR N G ISL+LP I ++ + F+++LD L + R Sbjct: 412 GMYPADEKDTPIYVGRFNCGAISLHLPMIFEKSLKENKDFYEILDYYLEMIRDIHKRTKE 471 Query: 448 RLEGVKARVAPILYMEGA-CGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEH 506 L KA + P+ + +G G L+ +D+++ + ++ S G ++E + L+ + Sbjct: 472 HLARKKASINPLAFCQGGFYGGTLDLNDNIAPLL--ESSTFSFGITALNE-LQELYNNKS 528 Query: 507 VYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPG 566 + ++ + ++E + ++Q+K+E +++Y TP+ENLC + ++G++ Sbjct: 529 LVED---GKFAVEVMEHINNKLNQYKKEDHILYAVYGTPAENLCGVQIKQFRNKYGIIKK 585 Query: 567 VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWD 626 V+D+ Y +NSFH V ++++P K + E + L NGG I Y YP + +N+KA+E + Sbjct: 586 VSDRDYVSNSFHCHVTEEISPIQKQNLEKRFWDLFNGGKIQYVRYP-LNYNIKAMETLIL 644 Query: 627 YSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSP 686 + Y G N + C +CG+ + CPKCG+ + +++ R+ GYL Sbjct: 645 RAMDLGFYEGVNLALSFCDDCGYEQL-----EMEVCPKCGSKNLTKID---RMNGYLAYS 696 Query: 687 DARP---FNAGKQEEVKRRV 703 + N K E+K R Sbjct: 697 RVKGESRLNDAKMSEIKERK 716 >UniRef50_C7ZMN2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7ZMN2_NECH7 Length = 833 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 112/608 (18%), Positives = 226/608 (37%), Gaps = 55/608 (9%) Query: 112 SLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFP 171 ++EN+N ++ + Y + ++ + H HDL + Sbjct: 21 WKVSENSNSTYSH-QGLMQYVSNHIISQYWLDKIYTEEIRKYDSENRFHIHDLGFLS--- 76 Query: 172 MFNCMLIDLKGMLTQGFKMGNAEI--EPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 C ++ +L QGF +I PPK ++TA + + + G ++ D Sbjct: 77 -AYCSGWSIEDILLQGFGGVENKIQCRPPKHLNTALNQIVNFLFTLQGELAGAQALSSFD 135 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDA-FQSLEYEVNTLHTANGQT 288 LAPF+ + + E + + Y+ + + + A F +L ++ Q+ Sbjct: 136 TYLAPFIR---SDNLSYVEVFKYLQSFVYSLNVPTRSGFQAPFTNLSLDLICPSRLGDQS 192 Query: 289 PFVTFG-----FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKG 343 + E ++ ++ + G G FP + + +G++ + Sbjct: 193 VIIGGELHEEWIYSDFQEEMDILNKAFAEVMMQGDGNGNI-FSFPIPTYNLCEGIDWESP 251 Query: 344 DPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDG- 402 + E +K P N+ F++ M CR L + + G Sbjct: 252 R-----WKSIWEMTAKYGVPYFANFINSDLDPEDFRS-MCCRLRLDLSKLHCRVGGQYGA 305 Query: 403 ---RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPI 459 ++GV+++NLP +A + G + TF L + L +A+ +L + ++ A Sbjct: 306 SPLTGSIGVVTVNLPNLAYRSNGSKETFLAELSDTLRVAKDSLEIKRKLVDSNAA----- 360 Query: 460 LYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIA 519 LY A + + N ++ +G G++E + ALFG + + + Sbjct: 361 LYPYAAHYLS-ATKGRTGSYWTNHFST--IGVNGMNEAVVALFGE----TIAKQKMFALE 413 Query: 520 IVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHL 579 +++ +++ + +++ ETG ++L ++P+E+ C +F R D F T +YTNS L Sbjct: 414 VLDFIKERLQEFQNETGNLYNLEASPAESTCYKFARQDKILFPDRKIPT---FYTNSTML 470 Query: 580 DVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDY--SYQHVPYYGT 637 V+ + ++ + + GG + + K ++ S +PY Sbjct: 471 PVDTTEDLFEALAHQEDLQCSYTGGTVFHAFLGERLPEWKLARNLIKLLTSRFRIPYITL 530 Query: 638 NTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQE 697 C G+ + C CG V R+ GY R +N GK E Sbjct: 531 TPTFSICKTHGYR-----AGEEPECLLCG----ESCLVYSRIVGYFRPT--RDWNKGKSE 579 Query: 698 EVKRRVKH 705 E R + Sbjct: 580 EFTARKVY 587 >UniRef50_A7I0I1 Anaerobic ribonucleoside-triphosphate reductase n=27 Tax=Bacteria RepID=A7I0I1_CAMHC Length = 893 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 140/737 (18%), Positives = 246/737 (33%), Gaps = 134/737 (18%) Query: 48 EQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE------ 101 E+ + ++ + +IQ +E +L ++ ++++ YRH ++RE LN + Sbjct: 209 EKTEISCKISVEDIQDMIEKELFKSGNFKVLKSFMLYRHTHKLQREHILGLNDDTTYINS 268 Query: 102 ---IRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGD 158 I + + + ++ N+N + AG V ++ + ++ AH GD Sbjct: 269 TQTINEYINKID-WRISANSNTSYSN-AGLINNTAGKVVANFWLDSVYNKEEGAAHRNGD 326 Query: 159 IHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKM--GNAEIEPPKSISTATAVTAQIIAQVA 216 H HDLD C L+ +L +GF G E + P+ +A A + + Sbjct: 327 YHIHDLDCLSG----YCAGWSLRVLLNEGFNGVRGRVESKAPRHFYSALYQMANFLGILQ 382 Query: 217 SHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY 276 S G + D LAP+V + + T ++ A +S Y Sbjct: 383 SEWAGAQAFSSFDTYLAPYV---------------------FKDKLTDEQIKSAIESFVY 421 Query: 277 EVNTLHTANGQTPFVTFGF----------------------------------------- 295 +N Q+PF Sbjct: 422 NLNVPARWG-QSPFTNVTVDLTCPDDLKTQIPTVENEHIFKNFKDDELLKEAKKRGKNSL 480 Query: 296 ----GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQ 351 E + I + G K + FP + + + + + Sbjct: 481 TELTYGDFEPEMQRIVIAFYEILTRGD-KCGQPFTFPIPTVNLTENFDWRSA-----AAK 534 Query: 352 LALECASKRMYPDILNYD---QVVKVTGS-----------FKTPMGCRSFLGVWENENGE 397 E +K N+ ++ G M CR L + E Sbjct: 535 AIFENTAKVGSSYFQNFIGSQYMIDKNGKKVSNPKAYKPGAVRSMCCRLQLDLRELLKRG 594 Query: 398 QIHDG----RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVK 453 G ++GV+++NL R+ K DE + L+E LA L + + + Sbjct: 595 GGLFGSAEMTGSIGVVTINLARLGYLYKNDEDALFARLNELCELASGTLEKKRKFITKMF 654 Query: 454 ARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQL 513 R LY +R F N ++ +G G +E I + Sbjct: 655 ERG---LYPYTKRYLR---------NFNNHFST--IGINGANEMIKNFTDDKENIATPFG 700 Query: 514 RAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--PGVTDKG 571 R I+E LR+ + ++E TG ++L +TP+E RF + D F + G + Sbjct: 701 RKFATKIIEFLREKIKYFQERTGNLYNLEATPAEGTTYRFAKEDKKRFKDIIQAGFGENI 760 Query: 572 YYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH 631 YYTNS L + + +D + GG + + N ++ ++ Sbjct: 761 YYTNSTQLPANFTDDVFLALDLQDELQNSYTGGTVFHLYMKEKIQNGNICANLVRKIVEN 820 Query: 632 --VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHD-ASRVSVTRRVCGYLGSPDA 688 +PY C+E G+ + CP C + SR V RV GY ++ Sbjct: 821 YRLPYITITPIFSVCHEHGY-----IAGEHEFCPVCEQENKKSRCMVYTRVMGYYRPIES 875 Query: 689 RPFNAGKQEEVKRRVKH 705 FN GK E K R+ Sbjct: 876 --FNTGKIGEHKERIYF 890 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 51/117 (43%), Gaps = 7/117 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAE--VDDADYCATVAAVVSEQMQGRNQVDINE 60 ++KRDG F +I++AI +A ++ DD Y A ++ ++ + Q + + Sbjct: 2 IKIIKRDGSLENFMPFKIQDAIKKAFESENYVFDDKIYQAIISRIILDDEQNLDANNTER 61 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 Q ++ + YK + + R+ L+++ + Q + ++ N+N Sbjct: 62 KQNL---EISNKKYKN--EKFQNLADNLGDNRKNNQNLSEKNENEISQNDETIQNKN 113 >UniRef50_Q12U66 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12U66_METBU Length = 604 Score = 463 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 134/635 (21%), Positives = 237/635 (37%), Gaps = 44/635 (6%) Query: 84 YRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQ 143 + + E+ V LL ENAN +A + K YA + Sbjct: 3 GSKEEASIDHLDFKDTNELIDDVLYNRNWLLKENANTRFSPSVIDMH-VASQIKKRYALE 61 Query: 144 HLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSIST 203 +L ++V +AH +G+IH HDL PF P C ID + L G K ++ P K Sbjct: 62 NLYSKEVAKAHTKGNIHIHDLSN-PFKPY--CNGIDARIFLLDGLKFPDSRSSPAKRFDA 118 Query: 204 ATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRT 263 A + G I+ + +LAP + S + + + ++R Sbjct: 119 AIYHAMSFMLHSKHFFAGAQAIDMFNWLLAPHLHYSDIDEEELLQIVQGFMFQMNQSNRI 178 Query: 264 IKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGT----SWESRLIQESILRNRIAGLG 319 AF ++ +N + + F T E+R I + + G Sbjct: 179 G--AQSAFTNIGLRINCPSSLANELAVYGGEFIEKTYSCFEKEARAIYGAFMDIAAKGDA 236 Query: 320 KNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFK 379 FP + AI ++ + + + + S P LN + + Sbjct: 237 DGL-PFTFPLITTAITKDIDTED-----TLWKRTMYATSSTGAPYFLNLTT-DYLEENTT 289 Query: 380 TPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLAR 439 M CR L G + ++++NLPRIALEA+ + F+K LDE L + R Sbjct: 290 QAMCCRL-LARHSGGVWTAGGMGSGSNKIVTVNLPRIALEAE-NRDRFFKRLDEILEITR 347 Query: 440 KALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETIN 499 KAL+ + LY L ++ F + ++ G +G++E + Sbjct: 348 KALLEGQEIVRRS-------LYEWKILPWLLQRTENDLPYFDHSSRHLTFGTVGLNECLL 400 Query: 500 ALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTA 559 L G + + + G+ I+ + ++ + + G ++ TP+E+ R LD + Sbjct: 401 NLTGQDMI----EQHDLGMEIIRHMLGKIETYSIQDGIEYTFEQTPAESTAHRLATLDRS 456 Query: 560 EFGV---VPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQH 616 +G V G D YYTNS H+ K++ ++I E+ + P GG I + Sbjct: 457 AYGEKAHVQGSHDAAYYTNSTHVPYSSKISLAERIKIESRFHPYFTGGTISHIWMGESFP 516 Query: 617 NLKALEDVWDYSY-QHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSV 675 + + + ++ + + Y+ + C CP C V Sbjct: 517 DPEGMSELIEKLSGTDLAYFCFSPDFTVCEN-----RHVSRGMNLKCPVCNEPA---VDH 568 Query: 676 TRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQ 710 RV GY G + +N GKQ+E + R +++ + Sbjct: 569 VSRVTGYFGHVEQ--WNPGKQKEYEERHRYILQSK 601 >UniRef50_B7C7M8 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M8_9FIRM Length = 652 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 135/737 (18%), Positives = 258/737 (35%), Gaps = 122/737 (16%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQGR---NQVDI 58 V KRDG V F +I AI +A + ++ D + + Q + N++ + Sbjct: 2 IEVEKRDGSIVDFDPSKIFSAISKAFDSLHMEKDDAIINLLVLRATADFQAKIKENRISV 61 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIR--GLVEQTNASLLNE 116 IQ +VE L Y +A+ YI YR R+ R+ + N+ I N L +E Sbjct: 62 EMIQDSVEKTLSESGYYPVAKTYILYRKQRENVRKIQSTANEYIHLVNSYLHNNVPLEDE 121 Query: 117 NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 N+ V +G++ +Y + + AH+ GD++ H++ Sbjct: 122 NSLATYSV-GGLILSNSGMITSNYWLSEVYDAQITNAHKNGDLYIHNIHMLTGCS----A 176 Query: 177 LIDLKGMLTQGFKMGNAEIE--PPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAP 234 L+ ++ G N I P K +ST + + + ++ D +L P Sbjct: 177 GWSLEDLILHGLPSVNKMISSLPAKHLSTLCNQMVNFLGIMQNEWASAQSLAHFDTLLVP 236 Query: 235 FVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFG 294 F+ + K YD +S Y +N Q PF Sbjct: 237 FIHKD---------------------KLSKKMVYDCLESFIYGINIPSRWGTQAPFSQIT 275 Query: 295 F-----------------------GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLV 331 E +++ +++ G + FP + Sbjct: 276 LDWNIPKEFLNRKAIVAGLEEDFTYADCQVEMKILHDALFEVLNKGDISG-RGFQFPIVA 334 Query: 332 FAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 + + + + + +K P L ++ P+ Sbjct: 335 LYLHSNFDWMQE-------EELFKACAKYGTPYFLTQEKQDVEGYFGYKPLC-------- 379 Query: 392 ENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEG 451 ++GV++LNL R+A + + F+K LD +A ++ + L Sbjct: 380 ------------GSMGVVTLNLVRLAYLSS-SKDDFFKRLDSLSDVAIRSFEVKRQVLNQ 426 Query: 452 VKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHE-TINALFGGEHVYDN 510 L+ G D ++ + +LG +G++E +NA + + + D Sbjct: 427 --------LFKAGLYPYTKAYISDFNDYY------GTLGVVGMNEACLNAKWLQKDLMDM 472 Query: 511 EQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDK 570 + ++ L Q + ++ +L +TP+E++C F ++D ++ + Sbjct: 473 -HAQKFAQEVLNFLNQKISSQAQKL----NLEATPAESVCTHFAKMDKEKYPEIQSF--- 524 Query: 571 GYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ 630 GYYTNS HLDV + ++ + + L +G + N K + Y+ Sbjct: 525 GYYTNSTHLDVASTDDVFEALRIQQKVQTLYSGATSFPVFMDHGIENWKMAALLVKTIYE 584 Query: 631 --HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDA 688 ++P + C + G+ K CP C + + RV GY + + Sbjct: 585 NYNIPVFTITPTYSVCADHGY-----VFGKQDVCPIC----QKPLEIYSRVSGYYRNLED 635 Query: 689 RPFNAGKQEEVKRRVKH 705 +N GKQ+E RR + Sbjct: 636 --WNEGKQKEFSRRKTY 650 >UniRef50_Q12U78 Anaerobic ribonucleoside-triphosphate reductase n=14 Tax=Archaea RepID=Q12U78_METBU Length = 795 Score = 448 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 133/768 (17%), Positives = 243/768 (31%), Gaps = 98/768 (12%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRA------AKAAEVDDADYCATVAAVVSEQMQGRNQV 56 P V DG V + + +L+ D VA ++++G + Sbjct: 55 PKVRTTDGHMVQWDRNIVVNQLLKETTLSEWYHNISSISKDEAHDVAKETEKRIRG---M 111 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGL--VEQTNASLL 114 +I + + +L++ I R R+ + ++Q + Sbjct: 112 NIKFLSGPLIRELVNM---------ILLERGHLEWRNVSTRVGSPVFDACEIDQGSGFEA 162 Query: 115 NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFN 174 NENAN + I + Y LLP + H GD+H HDL+Y F Sbjct: 163 NENANLQENAETAHKKKADKISKEQYLL--LLPPKIADLHLNGDLHIHDLEY--FGTRAF 218 Query: 175 CMLIDLKGMLTQGFKMGNA-----EIEPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 C DL+ G + P A + + ++ GG Sbjct: 219 CQDWDLRYFFYYGLMPDGSGAKASVAGPAMKAEVAMLHAVKALGSAQTNFAGGQGFYNFL 278 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTP 289 APF K + + + + +R + + + Q + Sbjct: 279 TFCAPFFEGKPYKEIEQLMQMFVYEMTQMMVARGGQLVFSSVQ---LSPGVPKMWRDKPV 335 Query: 290 F-----------VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGL 338 E RL ++++ + G K FPK +I Sbjct: 336 VYRGRVWDGTNGTEKRVYGDYEREVRLGFKAMMNVMLEGD-YWGKPFNFPKPEISIEPDF 394 Query: 339 --------NHKKGDPNYD-IKQLALECASKRMYPDILNYDQVVKVTGSFKT-PMGCRSFL 388 P YD + + E +K P N + G + C Sbjct: 395 MEEDEMFNRANPELPTYDELYTMTFELTAKYGTPYFDNQLPEYRGAGEGISCYQCCAYQF 454 Query: 389 GVWENENG---------EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLAR 439 + + E H + VISLN PR A A+ D+ + L + A Sbjct: 455 SANADSDSEFDEKMYFNEGKHFSMGSWQVISLNCPRAAYLAENDDEKLFSHLKHLMDEAM 514 Query: 440 KALMTRIARLEGVKAR-VAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETI 498 + T++ L+ + P + + ++G IGI+E + Sbjct: 515 EVFQTKVKWLKPIIENGRMPFATQQ---PKDPVTGKKGAIAVDIDSLVFTIGVIGINEMV 571 Query: 499 NALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLD- 557 G ++++ I + + + + G +L TP+E RF D Sbjct: 572 QYHTG-SQMHESRDAFKLAIRAMTEMDIYGKELSRKFGMEIALARTPAETTGQRFSVSDL 630 Query: 558 -TAEF-------------GVVPGVTDKG----YYTNSFHLDVEKKVNPYDKIDFEAPYPP 599 EF V G+ + YYTN H+ V+ D+I+ E + P Sbjct: 631 LHEEFRDKVISVVKGDVKAAVEGIKNTHDLPIYYTNGTHVPPGADVSLVDRINIEHVFFP 690 Query: 600 LANGGFICYGEYPNIQHNLKALEDVWDYSYQH--VPYYGTNTPIDECYECGFTGEFECTS 657 + +GG I + + K L+D ++ + Y+ + C + Sbjct: 691 IVDGGDIMHIWMGEGSPDAKGLKDFAMNLARNTQLGYFAFTKDMSVCMD----DFHMMAG 746 Query: 658 KGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 C CG+ + ++ RV GY+ + +NA K++E++ R ++ Sbjct: 747 LKDACENCGSDNIEQL---SRVTGYIQAV--GGWNAAKKQELEDRKRY 789 >UniRef50_Q0TSL9 Anaerobic ribonucleoside-triphosphate reductase n=7 Tax=Clostridium perfringens RepID=Q0TSL9_CLOP1 Length = 603 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 132/656 (20%), Positives = 238/656 (36%), Gaps = 93/656 (14%) Query: 81 YIEYRHDRDIERE-KRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKH 139 Y + RD++++ K +++I + +NEN+N + ++A V+K Sbjct: 2 YNVSINKRDVKKDVKNMLSSKKIVDDYIKKIDWRVNENSNSPYSFGSLNKHIIA-EVSKD 60 Query: 140 YARQHLL-PRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGF-KMGNA-EIE 196 Y + + ++ A++ GD+H HDL C L+ ++ G + N Sbjct: 61 YWLNEVYKDKRIIDAYKNGDMHIHDLGGL----TLYCCGYSLRNIILMGVQGIPNIPTSS 116 Query: 197 PPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAE 256 P K A ++ + I G N D +LAP++ Sbjct: 117 PAKHFDAILNQIANLVTIYQNEIMGAVAFNSFDTLLAPYIKKD----------------- 159 Query: 257 GYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF--------------------- 295 + T +E Q+ + +N+ A + F F Sbjct: 160 ----NLTYEEVKQNLQNFIFSINSNSRAGAEPAFTNITFDLFPPKDLENDPALIGDKIQE 215 Query: 296 --GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLA 353 E ++ ++ G N + +P + I + +PN D + Sbjct: 216 FTYKECQKEMDMLNKAFYELMNEGD-YNGRPFSYPIPTYNINSNFDF--DNPNND---ML 269 Query: 354 LECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDG----RNNLGVI 409 E K YP N+ ++ M CR L + E G ++GV+ Sbjct: 270 FEMTGKFGYPYFANFVNSDMDQSDVRS-MCCRLNLDLRELRKRNGGLFGSGDSTGSIGVV 328 Query: 410 SLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVR 469 ++NLPR+A + K +E F+ L E L++A+ +L + L + G Sbjct: 329 TINLPRLAYKHKNNEKEFFNALKEILIIAKDSLEKKRKWLNDNIINKDMLPAFSTYVGT- 387 Query: 470 LNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVD 529 KN ++ +G +G++E G E+ I + +R+ + Sbjct: 388 ----------LKNHFST--IGIVGLNEMCENFNGNN--ILTEEGMEFSIKVCNFIREELI 433 Query: 530 QWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--PGVTDKGYYTNSFHLDVEKKVNP 587 ++EETG ++ +TP+E+ C R + D +F + G + YYTNS H+ + N Sbjct: 434 NFQEETGNLYNFEATPAESTCYRLAKKDVEDFEDIIVRGGREYPYYTNSCHMPPNEVKNL 493 Query: 588 YDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYE 646 D + L GG + + K+ V + PY + C E Sbjct: 494 KQLFDHQDKLQVLFTGGTVVHIYCDGAISGEKSKHIVNTVCKKYRTPYVSISPLNRYCKE 553 Query: 647 CGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRR 702 G+ E CP CG ++ + +R+ GYL + FN GK+ E K R Sbjct: 554 HGYVKERV-----EECPICGK----KLDLYQRITGYLRKVE--FFNDGKKSEFKDR 598 >UniRef50_Q8TWY0 Oxygen-sensitive ribonucleoside-triphosphate reductase n=1 Tax=Methanopyrus kandleri RepID=Q8TWY0_METKA Length = 591 Score = 444 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 129/605 (21%), Positives = 234/605 (38%), Gaps = 49/605 (8%) Query: 117 NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 NAN + +H+ +H+L +AH G IH HDLDY+ NC Sbjct: 18 NANMLPTPEVISKIFQDRWQKRHF-LKHVLDGKTARAHLEGYIHIHDLDYA--LTRSNCC 74 Query: 177 LIDLKGMLTQGFKMGN------AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDE 230 D + +L G N +P K A + + + GG + ++ Sbjct: 75 QHDCRWVLKYGLYARNPIGRLTCVSKPAKHAEVAVLHILKWLMTSQNFFAGGQGQDFVNF 134 Query: 231 VLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF 290 ++AP++ + + + I E + AF ++ E+ + Sbjct: 135 LVAPYIAEEGLSYEEIRQLAQIMMFEA-TQDLVARGGQPAFTNVNLELTCPDFLEDEPAV 193 Query: 291 VT----FGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPN 346 G E+ + ++L ++ G FP+++ +R G + + Sbjct: 194 GPGGEIVGTYGDFEEEAIMFARALLDVQLEGDAAGA-PLKFPQIIVKVRPGYDKE----- 247 Query: 347 YDIKQLALECASKRMYPDILNYDQVV--KVTGSFKTPMGCRSFLGVWENENGEQIHDGRN 404 +LA E A++ N K+ G MGCR+ L + E Sbjct: 248 --TLELAFEVAAENGAVYFANMLNRDWRKLVGDNVNYMGCRTCLATNWTGDWEIDTIRTG 305 Query: 405 NLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEG 464 N ++LNLP +A E++ DE F + + E +AR+AL+ R ++ G Sbjct: 306 NFEYVTLNLPLLAHESR-DEDEFLEKIREYCEVAREALLARWRCVKKCLE--------AG 356 Query: 465 ACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERL 524 D F+ + SLG++G+ E I L G +++ ++E L Sbjct: 357 LYDGCQRWKPDGEYYFRYEHTTWSLGFVGLAEAIEVLTGY-GFWEDPSAMRLAERVLEEL 415 Query: 525 RQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGV--VPGVTDKGYYTNSFHLDVE 582 +++ E G +S+ +P+E+ +R R ++ V G + Y TNS H+ + Sbjct: 416 NDVREEFHERDGRRWSVVQSPAESAAERLARKYLEKYPDAKVRGTEHRPYLTNSCHVPYD 475 Query: 583 KKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH--VPYYGTNTP 640 + VN ++ + EA + P+ GG I + + + ++L + + + + Sbjct: 476 EDVNVVERAEIEAKFHPMTLGGHITHFWLGE-RTDPRSLMKLTVRVLRRNTIGFLAITRD 534 Query: 641 IDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVK 700 C C T E CP+CG R ++ RV GYL D+ F GK++E K Sbjct: 535 YSVCDRCQRTYEGVV----EQCPECGR----RCTIWSRVTGYLAPVDS--FVDGKKQEHK 584 Query: 701 RRVKH 705 R++H Sbjct: 585 ERLRH 589 >UniRef50_Q1PZG5 Similar to oxygen sensitive ribonucleoside triphosphate reductase NrdD n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZG5_9BACT Length = 812 Score = 437 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 130/712 (18%), Positives = 271/712 (38%), Gaps = 73/712 (10%) Query: 14 PFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDINEIQTAVENQLMS 71 P+ ++ A+ + A + + +A+VV +++ G N++ + I+ V+N+L Sbjct: 130 PWDKRKVAVALEKEADISG----EVAEEIASVVEQRVFSSGLNRISTSLIRELVDNELFE 185 Query: 72 GPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDL 131 Y + ++ G ++ L+ N EN+N + Sbjct: 186 RGY-----------SKKLEKQAVLGMPKYDLDELILSKN----KENSNIATNNPEAINLA 230 Query: 132 LAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMG 191 +A K YA Q + ++V +AH G +H HDL Y C L+ + G + Sbjct: 231 IAENTLKQYALQEVFSKEVSEAHLSGMVHLHDLGYP---TRVYCSSHSLEYLKKYGLSLE 287 Query: 192 NAE--IEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEE 249 N + P K T T +A + ++ G + I+ + AP++ ++ K + Sbjct: 288 NLDTDSAPAKHARTLTGHLNTFLASMQAYYAGALGVGYINIMYAPYLEGMSHQEMKQEAQ 347 Query: 250 WNIPDAEGYANSRTIKECYDAFQSLEYEVNT--LHTANGQTPFVTFGFGLGTS-----WE 302 I A SR + + L++ ++T G G + Sbjct: 348 HLIFSCSQSAFSRGGQTLF-----LDFNIHTGIPGYLKDIPAIGPGGKPTGKTYGEYAET 402 Query: 303 SRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMY 362 +R ++L G FPK F I + Y++ + A + AS+ Sbjct: 403 ARRFTLAMLDVWREGDCYGH-VFAFPKCDFHINEESFKDP--KQYELLEYACQIASENGV 459 Query: 363 PDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRN-NLGVISLNLPRIALEA- 420 P + + ++ CR + +N + R I++NLP+ + +A Sbjct: 460 PYFVFDRDEITLSA------CCRLRTTIDDNYMIKHPESMRFCGFQNITINLPQASYKAG 513 Query: 421 KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIF 480 KG+ +K +D+ + +A KA + + + + + L+ G D Sbjct: 514 KGNWDALYKEIDKAIEIAVKAHLQKKKFISKLMSGPEMPLWEIGKKA------KDGRPYV 567 Query: 481 KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFS 540 ++ +G IG++E + + G E +++ + + +G+ +V + V + ++ FS Sbjct: 568 DLEASTYIVGIIGLNECLQFMTGKE-LHEGDDMIRQGLRVVSHMYTRVKEAGKKHKLKFS 626 Query: 541 LYSTPSENLCDRFCRLDTAEFGV----VPGVTDKG--YYTNSFHLDVEKKVNPYDKIDFE 594 L +P+E+ R ++D F V G ++ YYTNS HL + V+ +I + Sbjct: 627 LEESPAESASRRLAKVDMRNFPEAADVVKGNDERDGLYYTNSIHLRPDAPVDMITRIYLQ 686 Query: 595 APYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVP--YYGTNTPIDECYECGFTGE 652 + + + G I + + ++ ++ ++++ + C +C + Sbjct: 687 SKFHTMIESGAIIHAFVGEERPPASSILNLVKKTFKNTQAAQVTISPEFTICNDC----K 742 Query: 653 FECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVK 704 C CG+ + + R+ GY + +N K E+ R K Sbjct: 743 KVTKKLTDICGYCGSRNVYGI---TRIVGYFSRIN--NWNKSKISELADRHK 789 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVS---EQMQGRNQVD 57 M +V+KRDG PF ++I +AI +AA+A +D +A VVS + N Sbjct: 4 MIEYVVKRDGRTAPFVEKKIADAIFKAAQAVGGNDRALAEELAVVVSMFLAKKYNGNPPG 63 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 I IQ VE L+ + + A+AYI YR R R+ R+ ++ + V+ T+ SL+ + Sbjct: 64 IENIQDVVEKVLIETGHAKTAKAYIIYRDKRARIRD-SLRVRKQSQKRVDTTDVSLMVDT 122 Query: 118 ANKDSKVI 125 KD Sbjct: 123 ETKDETFP 130 >UniRef50_C9LGY8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Prevotella RepID=C9LGY8_9BACT Length = 727 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 133/726 (18%), Positives = 242/726 (33%), Gaps = 70/726 (9%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 + KRDG F ++IK AIL+A + A V E ++ N + + +IQ Sbjct: 33 ITKRDGTTERFSLDKIKSAILKAFTSLHQP---IDAQGLQRVIEHLRFCNGMSVEDIQNQ 89 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIERE--KRGRLNQEIRGLVEQTNASLLNENANKDS 122 VE LM+ + ++A+A++ YR +R+ +R + S + NAN ++ Sbjct: 90 VEVALMAEKHFKVAKAFMLYRQQHTEDRDVAERLSFMFDYCDAANPATGSKYDANANVEN 149 Query: 123 KVIPTQRDLLAGIVA---KHYARQHLLPRDVVQAHERGDIHYHDLDY----SPFFPMFNC 175 K I T L + + +A ++ D + C Sbjct: 150 KNIATLIGELPKRSFIRLNRRLLTDRIKQMYGKALAERYLYLLDNHFIYKNDETSLANYC 209 Query: 176 MLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 I + L G P ++ + ++ V+S + G ++ F Sbjct: 210 ASITMYPWLLNGTMNIGGNSTAPTNLKSFCGGFVNMVFIVSSMLSGACATPEFLMYMSYF 269 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA-NGQTPFVTFG 294 + Y + + K D F+ + Y +N A N Q F Sbjct: 270 LQQEYGDDFYLRADEVVDL--SKKQRTMDKIITDCFEQVVYSINQPTGARNFQAVFWNIS 327 Query: 295 FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLAL 354 + + ESI + GK L N ++ + Sbjct: 328 YY------DKNYFESIFGDFRFPDGKKPSWDALSWLQKRFMRWFNAERTRTVLTFPVETM 381 Query: 355 ECASKRMYP----DILNYDQVVKVTGSFKTPM---------GCRSFLGVWENENGEQIHD 401 SK ++ SF T M CR + +N + Sbjct: 382 ALLSKDGDVLDKEYADFTAEMYAAGHSFFTYMSDNADSLASCCRLRNEIQDNGFSYTLGA 441 Query: 402 G---RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAP 458 G + V+++NL R +A + + + L + L K + L+ ++A+ Sbjct: 442 GGVSTGSKSVLTINLNRCVQQATREGLNYTEYLASIVDLVHKVQLAYNENLKALQAKGML 501 Query: 459 ILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGI 518 L+ G R +++G G+ E +L G + DN++ Sbjct: 502 PLFDAG--------------YINIQRQYLTIGVNGMVEAAESL--GIQISDNKEYEEFVG 545 Query: 519 AIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFH 578 +I+ + + Q++ + F+ P+EN+ + R D VP + Y NS+ Sbjct: 546 SILGLIEKYNKQYRSKD-VLFNCEMIPAENVGVKHARWDREAGYFVP----RDCY-NSYF 599 Query: 579 LDV-EKKVNPYDKIDFEA-PYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYG 636 V + + +K Y GG + + + + + + Y+ Sbjct: 600 YIVEDPNTDIIEKFRLHGRRYIEHLTGGSALHMNLDEHLGEAQYRQLLRVAAKEGCNYFT 659 Query: 637 TNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQ 696 N P C ECG + CP C +H+ V RV GYL F+ +Q Sbjct: 660 FNIPNTLCNECGTIDKRHLQE----CPHCHSHN---VDYLTRVIGYLKRVS--NFSVDRQ 710 Query: 697 EEVKRR 702 +E RR Sbjct: 711 KEAARR 716 >UniRef50_A1RX14 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RX14_THEPD Length = 639 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 132/691 (19%), Positives = 217/691 (31%), Gaps = 127/691 (18%) Query: 89 DIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPR 148 +++ L +++ NENAN + + L +V LP Sbjct: 2 TEIVQQKKSLVRDLEESYLAGIDWERNENANHNVSYSNFRNYLFEKLVKSKEVLSEYLPP 61 Query: 149 DVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVT 208 ++ H RGDIH H L S + P C K +L G K P + TA A Sbjct: 62 LAIEQHYRGDIHIHKLPDSLWIPY--CAGWSYKKILQLGLKTPTIISAPARHFDTAVAHL 119 Query: 209 AQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECY 268 A G ++ D +APF + + Sbjct: 120 VNFFFMGAQEWTGAQAVSAFDLFVAPFAEGD---------------------GLSKERIK 158 Query: 269 DAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRL----------------------I 306 Q + +E+N A Q+PF + TS + + Sbjct: 159 QTLQGMLFELNYPARAGYQSPFTNITLVMDTSKDMLEGEAIVAGKKAGSLGDYIEKALAV 218 Query: 307 QESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDIL 366 E++ G + FP + + G ++ S++ +L Sbjct: 219 DEALFELYAEGDAAG-QPFTFPIPTIMLTKNFDWN-GRRWGELTDKIFTALSRKGSAYLL 276 Query: 367 NYDQVVKVTGSFKTPMGCRSFLGVW---------------------------------EN 393 N M CR + V EN Sbjct: 277 NG---YASNVEALYAMCCRLTIDVNHVMGKSGNGSPSFSLKLSRADEEDAFEKFMKSREN 333 Query: 394 ENGEQI---HDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE 450 I D ++GV++LNLPR+A +KG+ F +LLD L AR L+T R E Sbjct: 334 SRTYGIWALPDATGSIGVVTLNLPRLAALSKGEWPLFEELLDSLLKNARDVLLTWRKRYE 393 Query: 451 GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY-- 508 A L F + + +G IG+ E V+ Sbjct: 394 KTLAAGLMPLT------------KTYLGHFNHHFNT--IGVIGLPEAAANFMRNPKVWFE 439 Query: 509 ----DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGV- 563 + ++ +V +R+ + +E GY +++ P E+ + D F Sbjct: 440 GGVGELQEAVEIEKKMVSLIRERASELEERDGYLYNVEEIPGESTGYKLALADLQLFKEE 499 Query: 564 -------VPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQH 616 +P +Y+NS + V Y + +E GG + + Q Sbjct: 500 HARGEVLIPSDGKAPFYSNS-VVPYYADVPMYQRAIWEGYVQQEFTGGVMMHLFLHE-QP 557 Query: 617 NLKALEDVWDYSYQH--VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVS 674 + KAL ++ + V Y+ I C +CG + CP CG+ + V Sbjct: 558 DPKALRNLVYRIATNTKVVYFSITPTITVCRKCGRSTTGYLDG----CPHCGSSE---VE 610 Query: 675 VTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 R+ GY +N GK+ E K RV + Sbjct: 611 HWSRIVGYYRPVS--NWNPGKKAEFKLRVTY 639 >UniRef50_C5VLT4 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Prevotella RepID=C5VLT4_9BACT Length = 719 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 133/735 (18%), Positives = 245/735 (33%), Gaps = 86/735 (11%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 + KRDG K F ++I AIL+A ++ + T++ +++ + +N + + +IQ Sbjct: 7 TITKRDGSKDRFSLDKIMNAILKAFESVN--EPTDLGTLSKIIAN-LNIQNDIKVEDIQN 63 Query: 64 AVENQLMSGPYKQLARAYIEYRHDRDIERE--KRGRLNQEIRGLVEQTNASLLNENANKD 121 VE LM Y Q+A+++I YR +RE ++ + + S + NAN + Sbjct: 64 QVELALMKEGYYQVAKSFIVYRQQHTEDRETLEKMKFLSDYCVASNAATGSKFDANANVE 123 Query: 122 SKVIPT-------------QRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSP 168 K I T R LL + K Y + L + + I+ +D Sbjct: 124 HKNIATLIGELPKQGFIRLNRRLLVDRIKKMYGKD--LADEYIDLLNHHFIYKNDETNLA 181 Query: 169 FFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRI 228 C I + L G P ++ + ++ V+S + G Sbjct: 182 ----NYCASITMYPWLIGGTNSIGGNSTAPTNLKSFCGGFINMVFMVSSMLAGACATPEF 237 Query: 229 DEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA-NGQ 287 + F+ Y K + + K D F+ + Y +N A N Q Sbjct: 238 LMYMNYFIQKEYGKDYWERADEIVDL--SLRKRTIDKVITDYFEQIVYSLNQPTGARNYQ 295 Query: 288 TPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNY 347 F + R ES+ N G L N ++ Sbjct: 296 AVFWNISYY------DRPYFESLFGNFYFPDGSQPDWESLSWLQKRFMTWFNQERLKTVL 349 Query: 348 DIKQLALECASKRM------YPDILNYDQVVKVTGSFKTPM---------GCRSFLGVWE 392 + ++ + D ++ SF T M CR + + Sbjct: 350 TFPVETMALLAENGDCKDKEWGDFA--AKMYSEGHSFFTYMSDNADSLSSCCRLRNEIQD 407 Query: 393 NENGEQIHDG---RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARL 449 N + G + V+++NL R A + + + L + L K + L Sbjct: 408 NGFSYTLGAGGVSTGSKSVLTINLNRCIQFAVNNNLDYKEYLTHIIELCHKVQLAYNENL 467 Query: 450 EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYD 509 + + L+ G R +++G G+ E + G + Sbjct: 468 KELLRNHMLPLFDAG--------------YINIDRQYLTIGINGLVEAAEFM--GLDITP 511 Query: 510 NEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTD 569 NE+ + ++ + ++ + F+ P+EN+ + + D+ + VP Sbjct: 512 NEEYKKFVQTVLGLIETQNKAFRTKEAM-FNCEMIPAENVGVKHAKWDSEDGYFVP---- 566 Query: 570 KGYYTNSFHLDVEKKV-NPYDKIDFEA-PYPPLANGGFICYGEYPNIQHNLKALEDVWDY 627 + Y NS+ VE DK PY GG + + + + Sbjct: 567 RSCY-NSYFYRVEDNSLTILDKFKLHGAPYIEHLTGGSALHMNLEEHLSEPQYRQLLRVA 625 Query: 628 SYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPD 687 + + Y+ N P C +CG + CP C + + V R+ GY+ Sbjct: 626 AQEGCNYFTFNIPNTVCNDCGHIDKRYM----HECPHCHSKN---VDYLTRIIGYMKRVS 678 Query: 688 ARPFNAGKQEEVKRR 702 F+ +QEE RR Sbjct: 679 --NFSVPRQEEAHRR 691 >UniRef50_Q2LUI4 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUI4_SYNAS Length = 731 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 140/723 (19%), Positives = 247/723 (34%), Gaps = 73/723 (10%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQ--VDI 58 +T V D + +RI +A++R D+D V+ V +Q+ + Sbjct: 52 LTLFVRTSDEEVARWNRQRIVDALIRETD----IDSDTAEAVSREVEKQIMASGIGLLTT 107 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 + I+ V+ +L+ D G ++ L+ N NA Sbjct: 108 SLIRELVDAKLIERGL-----------EDARGMHALLGFPLYDVGQLILHPN----RGNA 152 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 N T L G + + YA + DV AH GD+H H L Y P C Sbjct: 153 NLPHNPEATNLILAEG-IKRAYALHSVFSHDVGDAHTAGDLHIHALGYID-RPYSICS-- 208 Query: 179 DLKGMLTQGFKMGNAE--IEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 L+ + G + N+ P + A + A + H G + ++ AP++ Sbjct: 209 SLEYIKKFGMDLPNSVNVAGPARHGDVLLAHMVRYAAILQGHFSGVVAWHAVNLFFAPYL 268 Query: 237 TASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF- 295 + + + I + A++ + F + G Sbjct: 269 VGMPDAEVRQLAQMLIYEFSQLASATGGQSI---FTDIHLYWEVPEYLADVPAIGPGGEE 325 Query: 296 ----GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQ 351 ESR ++ G K +FP+ + I + + Sbjct: 326 TGKCYGDYLPESRRFVWALFDVYREGDALG-KPFIFPRPIVHITEAFFRTPD--CGEFLD 382 Query: 352 LALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIH----DGRNNLG 407 E A + P + G C S + E + ++ Sbjct: 383 HLCEVAVDKGNPIFVF------DRGDLLRLSECGSLYPGNSPSHKEDMQKPWMMRHASMQ 436 Query: 408 VISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACG 467 IS+NLPR+ A+GD + LL +L LA KA + + +E + Y Sbjct: 437 NISINLPRLGYRAEGDSRRLFDLLTAQLELAVKAHSQKKSFMEKLLD------YGRQGPL 490 Query: 468 VRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQA 527 L + D + R + +G +G++E + G H++++ G+ IV +++ Sbjct: 491 SLLTMNRDGHPYLRPDRMTYLVGMVGLNELVRISTGK-HLHESSTALKLGLKIVAHMKKQ 549 Query: 528 VDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKG-------YYTNSFHLD 580 +D+ +TG L +P+E RF RLD F G +G YYTNS +LD Sbjct: 550 IDKLSRKTGMRLILEQSPAETTAYRFARLDLRYFSPGAGRFIRGDVVRGGLYYTNSTNLD 609 Query: 581 VEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNT- 639 + K+ P++++ E + L G + + + +AL Y G Sbjct: 610 ISVKMMPFERVRQEGLFHSLIEGAALTNLRLEEKRPSKEALSSFIRQVYFETESAGVTFS 669 Query: 640 -PIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEE 698 C++C +CP CG ++ R+ Y +N GK E Sbjct: 670 SDFTTCFDC----RKTVRGLHESCPVCGEKAIDGLA---RITRYYSPIS--GWNKGKLAE 720 Query: 699 VKR 701 +K Sbjct: 721 LKD 723 >UniRef50_C8W489 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W489_DESAS Length = 1197 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 143/431 (33%), Positives = 226/431 (52%), Gaps = 20/431 (4%) Query: 280 TLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLN 339 A Q PF + G TS SR + ++L AGLG+ + +FP ++F +++G+N Sbjct: 780 HNSRAGAQVPFSSLNLGTETSEASRKVTRNLLMAYEAGLGRG-ENPIFPNIIFRVKEGIN 838 Query: 340 HKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVT-GSFKTPMGCRSFLGVWENENGEQ 398 DPNYD+ ++AL ASKR+ P D G + MGCR+ V N +G+ Sbjct: 839 LNPDDPNYDLFKVALRVASKRLNPTFSFMDAGFNSPFGDQVSYMGCRTR--VMSNRHGQA 896 Query: 399 IHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAP 458 + DGR NL ++NLPR+A++A+ + A F++ L++ L+ + L R +K R P Sbjct: 897 VTDGRGNLSFTTVNLPRVAIKAERNMAKFYRDLEDIFDLSARQLYHRYQVQAKLKVRDMP 956 Query: 459 ILYMEGAC--GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAK 516 + +G L +D + K+G ++++G+IG+ ET+ AL G H +++ + Sbjct: 957 FVMGQGLYMDSQGLRPEDVIEPAIKHG--TLAIGFIGLAETLTALTGKHHG-ESKSAQEI 1013 Query: 517 GIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNS 576 G IV + + VD+ E+ ++ +TP+E L RF +LD E+G++PGVT+K YYTNS Sbjct: 1014 GQEIVAFMAKKVDEAAEKYDKNYTFLATPAEGLSGRFIKLDRREYGIIPGVTNKEYYTNS 1073 Query: 577 FHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPN-IQHNLKALEDVWDYSYQ-HVPY 634 FH+ V ++ +DKI E Y N G I Y E HN++A+E + + ++ Y Sbjct: 1074 FHIPVNYPISIFDKISLEGVYHKYCNAGHISYVELEAPPVHNIEAMESIVRHMKDSNMGY 1133 Query: 635 YGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAG 694 N P+D C C G CP+CG+ RV RR+ GYL + D FN Sbjct: 1134 AAINYPVDFCTGCSHLGVI----NEDICPRCGSPFIRRV---RRITGYLSTVDR--FNDS 1184 Query: 695 KQEEVKRRVKH 705 K E+K R+ H Sbjct: 1185 KVSELKERITH 1195 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 35/320 (10%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ---GRNQVD 57 M + KRDG +V F ++I +AI RAA++ +D + V + ++ N Sbjct: 1 MFNTIKKRDGREVSFDDKKITDAIFRAARSVGGEDRQLAMELTIEVLKMIKAKYNGNAFG 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 + ++Q VE L+ + + A+AYI YR R RE +G L + ++ +T+ EN Sbjct: 61 VEDVQDIVEKVLIENGHARTAKAYILYRDRRTRMREAKGELMDAVEEILVETS----KEN 116 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 AN S + +A +K Y L+P ++ QAH RGDIH HDLD+ + C+ Sbjct: 117 ANV-SNSPSAKMLQIASAASKKYYLTRLIPDELSQAHTRGDIHIHDLDF--YGKTLTCIQ 173 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 I LK +L +GF G+ I PP+ ++ATA+ A I+ + ++GG + D +AP+V Sbjct: 174 IPLKRLLEEGFDNGHGYIRPPQRPNSATALAAIILQSSQNDMHGGQSFAFFDRDIAPYVE 233 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGL 297 + + E + A ++L Y +N++H+ G Sbjct: 234 NA-----------------------SEDETFQAMEALVYNLNSMHSLRGSERIW--ILDK 268 Query: 298 GTSWESRLIQESILRNRIAG 317 + + E G Sbjct: 269 EENRLKTVSMEEFHEQFEEG 288 >UniRef50_A6L4X5 Oxygen-sensitive ribonucleoside-triphosphate reductase n=10 Tax=Bacteroidales RepID=A6L4X5_BACV8 Length = 697 Score = 421 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 135/733 (18%), Positives = 246/733 (33%), Gaps = 84/733 (11%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 ++KRDG K F ++IK AI +A + V V ++ + +++ EIQ Sbjct: 8 IIKRDGKKETFSLDKIKNAIAKAFLSVGSF---ATQDVITTVLSRVSVSDGMNVEEIQNQ 64 Query: 65 VENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQ--EIRGLVEQTNASLLNENANKDS 122 VE LM+ Y +A+AY+ YR +RE R +L + S + NAN ++ Sbjct: 65 VEVALMAEHYYSVAKAYMLYRQKHLEDREVRDKLKFLLDYCDASNPATGSKYDANANVEN 124 Query: 123 KVIPT-------------QRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPF 169 K I T R LL + Y ++ L ++ I+ +D Sbjct: 125 KNIATLIGELPKSNFIRLNRRLLTDRLKDMYGKE--LSDRYLELLNHHFIYKNDETNLA- 181 Query: 170 FPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 C I + L G P ++ + ++ V+S + G Sbjct: 182 ---NYCASITMYPWLNNGTIAVGGNSTAPTNLKSFCGGFVNMVFIVSSMLSGACATPEFL 238 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA-NGQT 288 + F+ Y + + + + K D F+ + Y +N A N Q Sbjct: 239 MYMNYFIGLEYGQEYYKYPDKIVDLSTK--QRTIDKIITDCFEQIVYSINQPTGARNFQA 296 Query: 289 PFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYD 348 F + + ES+ N G L N ++ Sbjct: 297 VFWNVAYY------DKYYFESLFGNFFFPDGSQPDWNSLSWLQKRFMKWFNKERTRTVLT 350 Query: 349 IKQLALECASKRMYP----DILNYDQVVKVTGSFKTPM---------GCRSFLGVWENEN 395 + +K ++ SF T M CR + +N Sbjct: 351 FPVETMALLTKDGDVLDKEYGDFTAEMYSEGHSFFTYMSDNADSLSSCCRLRNEIQDNGF 410 Query: 396 GEQIHDG---RNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGV 452 + G + V+++NL R A + L+E + L K + L+ + Sbjct: 411 SYTLGAGGVSTGSKSVLTINLNRCIQHAVKSGILYPFFLEEVVDLVHKVQLAYNENLKLL 470 Query: 453 KARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQ 512 +++ L+ G R +++G G+ E + G + DN + Sbjct: 471 QSKGMLPLFDAG--------------YINMNRQYLTIGVNGLVEAAQFM--GIEINDNPK 514 Query: 513 LRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGV-TDKG 571 A I+ + + +++ + F+ P+EN+ + + D G T + Sbjct: 515 YEAFVQEILGMIERYNRKYRTKD-VLFNCEMIPAENVGVKHAKWDKE-----AGFQTFRE 568 Query: 572 YYTNSFHLDV-EKKVNPYDKIDFEA-PYPPLANGGFICYGEYPNIQHNLKALEDVWDYSY 629 Y NS+ V +K +N DK Y GG + + + + + Sbjct: 569 CY-NSYFYIVEDKSLNVVDKFRLHGRRYIKHLTGGSALHMNLEEHLSKEQYRQLLRVAAI 627 Query: 630 QHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDAR 689 + Y+ N P C EC + CP+C + + V RV GY+ Sbjct: 628 EGCNYFTFNIPNTICNECKHIDKRYL----HECPECHSRN---VDYLTRVIGYMKRIS-- 678 Query: 690 PFNAGKQEEVKRR 702 F+ +Q+E +R Sbjct: 679 NFSQARQKEAAQR 691 >UniRef50_C5A351 Anaerobic ribonucleoside triphosphate reductase (NrdD) n=2 Tax=Thermococcus RepID=C5A351_THEGJ Length = 617 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 120/671 (17%), Positives = 220/671 (32%), Gaps = 116/671 (17%) Query: 93 EKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQ 152 E I+ ++ +L ENAN+ ++ + + + +P++ + Sbjct: 3 EMETMKRDIIQEYAGWSSLDVL-ENANRYPGPTGFFAYVMEEALKESLSL---VPKEGRE 58 Query: 153 AHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQII 212 AH GDI+ H L YS + P C +L +G K P + T A + Sbjct: 59 AHFSGDIYIHKLPYSLYIPY--CTGHSTARLLEKGLKTPTIVSRPARHFDTYVDHIANYL 116 Query: 213 AQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQ 272 + + G ++ ++ PF+ RK Q Sbjct: 117 ITMQHYFSGAQALSSVEWYAGPFIRKEGLDRRK---------------------IRQQIQ 155 Query: 273 SLEYEVNTLHTANGQTPFVTFGFGLG-----------------------TSWESRLIQES 309 L Y +N QTPF F L E++ + Sbjct: 156 RLVYNLNYPSRVGMQTPFTNFTVTLDAPKKMLEGDHAVYAGERVEPLGEYEREAKDFFIA 215 Query: 310 ILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYD 369 + G + FP + + DP +I + ASKR LN + Sbjct: 216 LTEVLREGDALG-QPFTFPIPTLMVTAKMLW--DDP--EIFEAVFATASKRGSFYWLNTN 270 Query: 370 QVVKVTGSFKTPMGCRSFLGVWE----------------------NENGE--QIHDGRNN 405 V M CR + E G + D + Sbjct: 271 VVDP---DASYAMCCRIAIDKTEMAFAFGVSGKSAEEEALERLERGRFGGLWAMPDVTGS 327 Query: 406 LGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGA 465 + V ++NLPR+AL+A+G++ FW+ ++ L + RK R + Y Sbjct: 328 VNVTTVNLPRLALKARGNDDKFWEEYEKVLGVVRKTTDWFRERYVRLITS-----YKHMY 382 Query: 466 CGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLR 525 + L ++ F ++G +G+ E + +++ E R + E ++ Sbjct: 383 SMIHLYLEEFPGSHFN------TVGILGLPEAASIYLNEPKLWE-EGTRKDWLRAAELMK 435 Query: 526 Q-------AVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVT---DKGYYTN 575 + +W ETG +++ P E+ + D EF + + Y+ Sbjct: 436 EMVEFATAKAREWMRETGTPWNVEEVPGESAAAKLAIKDMREFPELKEYLSDPENPIYST 495 Query: 576 SFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQH-VPY 634 S + D+I E GG + + + + +AL + + + Y Sbjct: 496 S-VAPYYGALELADRIRVEEKVQKSFTGGVMMHIFLGE-EPDPEALAKLTKRLMRTELVY 553 Query: 635 YGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAG 694 + I C CG+ T CP+CG+ + V V R+ GY + +N Sbjct: 554 WSYTPAITVCNACGY----STTGLYTHCPRCGSEN---VEVWSRIIGYYRPL--KNWNPF 604 Query: 695 KQEEVKRRVKH 705 +++E R + Sbjct: 605 RKKEFWTRRHY 615 >UniRef50_A2BJ51 Ribonucleotide reductase, oxygen sensitive (RNR, class III) n=10 Tax=Archaea RepID=A2BJ51_HYPBU Length = 636 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 129/673 (19%), Positives = 228/673 (33%), Gaps = 128/673 (19%) Query: 106 VEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLD 165 + + + ENAN+ +A + R +LP + +AH G ++ H L Sbjct: 16 YLEASVFDVFENANRYPGP-SGLLTYVAEKALRPVVRS-VLPEPLARAHLDGRVYVHKLP 73 Query: 166 YSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTI 225 Y+ F P C ++ +L +G K P + T + + + G Sbjct: 74 YALFIP--YCSGHSVERLLRRGLKTPTITARPARHFDTFVDHVTNYLIAMQHYFSGAQAF 131 Query: 226 NRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTAN 285 ++ PF+ +E Q L + +N Sbjct: 132 GAVELYAGPFIRRD---------------------RLGYREIRQGVQRLIFNLNFPSRVG 170 Query: 286 GQTPFVTFGFGLGTS-----------------------WESRLIQESILRNRIAGLGKNR 322 QTPF F L + E+RL ++ + G Sbjct: 171 MQTPFTNFTVVLDAAETKLERDDAIYAGEPVGKLGEYLDEARLFVRALYEVHMEGDVAG- 229 Query: 323 KTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPM 382 + FP L + DP +I A++R LN +VV SF M Sbjct: 230 RPFTFPIPTIMTTSKLLY--DDP--EIFDAVFGAAARRGTGYWLN-TRVVDPNASF--AM 282 Query: 383 GCRSFLGVWENENG----------------------------EQIHDG--------RNNL 406 CR + + E + E+ H G + Sbjct: 283 CCRINIDMNELRHALRVGGKSMRIRDIRRELEQAREEYIRSLEKQHMGGLWAMPDITGSK 342 Query: 407 GVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC 466 VI++NLPRIALEA+ D+ F + LDE L L R L R E + A+ P Y Sbjct: 343 VVITVNLPRIALEARRDDEAFVEKLDETLALVRSGLEWFARRYERL-AKAYPEFYS---- 397 Query: 467 GVRLNADDDVSEIFKNGRAS--ISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERL 524 + V E + ++ + +G IG+ E + G + E R++ + E + Sbjct: 398 ----MVLEYVPEALRLMGSTYFLPVGVIGLSEAAAIMAGDPKAW-TEGSRSQWFRMAEWM 452 Query: 525 RQ-------AVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVT---DKGYYT 574 ++ +W ++TG F++ P E+ R D F + ++ Y+ Sbjct: 453 KKTVEHIVSRTREWSKKTGIPFNVEEVPGESAAARLAERDVQLFPELREYLPDPEEPIYS 512 Query: 575 NSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDY--SYQHV 632 S + +++++ E P+ GG I + + + +AL + + + Sbjct: 513 TSI-APYYAPMELWERVEVEERVQPVFTGGVIMHIFLGE-EPDPEALASLTRKLAANTSL 570 Query: 633 PYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFN 692 Y+ + C CG++ TCP+CG + R+ GY R +N Sbjct: 571 VYWSYTPALSVCPRCGWSSV----GIRTTCPRCGGE----TEIWSRIVGYYRPL--RNWN 620 Query: 693 AGKQEEVKRRVKH 705 ++ E R + Sbjct: 621 PARRREFWLRHHY 633 >UniRef50_A8A8G8 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8G8_IGNH4 Length = 660 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 125/703 (17%), Positives = 224/703 (31%), Gaps = 129/703 (18%) Query: 82 IEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNE-----NANKDSKVIPTQRDLLAGIV 136 I +H R + R+ + L N + +S LL Sbjct: 2 IRPKHSNTKRRPRMARVGDHLTTLGFTNVKKPRNVLEEMMGRSVNSNEYQGPNKLLLEAA 61 Query: 137 AKHYAR---QHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNA 193 ++ + ++P+D++ AH+ G ++ H L S F P C D +L +G K Sbjct: 62 ERYLWEHVVEDVMPKDMISAHKEGVVYVHKLPQSVFLPY--CNGNDYSRVLKKGLKTPTI 119 Query: 194 EIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIP 253 P + A A A +A + + G ++ +APF+ Sbjct: 120 VAGPARHYQVAMAHAANFLAMMQQYWTGAQAFGSVELWVAPFIAKE-------------- 165 Query: 254 DAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFG----------------- 296 + +E Q+L YE+N QTPF Sbjct: 166 -------HLSDEEIRQGIQTLYYELNLPWRPGMQTPFTNITVTYTESKYMLDQPVIIGGA 218 Query: 297 ------LGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIK 350 E+R + + G R+ FP + + ++ Sbjct: 219 STGDLLGDYLDEARRWLIQLGKVLQRGDSL-RQPFTFPIPTLMPTAKDFYN----DAELF 273 Query: 351 QLALECASKRMYPDILNYDQVVKVTGSFKTPMGCR---------------SFLGVWENEN 395 A+K LN + M CR L E++ Sbjct: 274 DAIFVTAAKMGSYYWLNTKVIDP---DSAFAMCCRYVVKKDEVNKAFMGGLRLKKLEDQR 330 Query: 396 GEQ--------------IHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKA 441 E+ I D ++GV+++NLPRIAL+A+GD TF+++L+ER+ L K Sbjct: 331 KEELEKLAKGRLGGMWAIPDITGSIGVVTVNLPRIALDARGDVETFFEILEERVELVAKW 390 Query: 442 LMTRIA---RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETI 498 L RL +++ R + + ++G IG+ E Sbjct: 391 LSWWRNHYLRLMKTYRNFYSMVWEYSPEWTRTHFN--------------TIGAIGMPEAA 436 Query: 499 NALFGGEHVYDNEQ------LRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDR 552 L G V+ +E +++ + + E G F++ P E + Sbjct: 437 AILLGDPEVWTSEDVGAKEKAIELEDKMIKTMADIASRLTIEMGEPFNVEEVPGETAAAK 496 Query: 553 FCRLDTAEFGVVPGVTDK--GYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGE 610 D + V + Y+ S + + + +I +E GG + + Sbjct: 497 LFLNDLKHYPEVREYVPEGVDMYSTSVVPYYDHGITLWQRIKWEGKVQQRFTGGVMMHIF 556 Query: 611 YPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHD 669 Q + +AL + V Y+ I C G CP+CG Sbjct: 557 LGE-QPDPEALAKLTQKIMDAGVVYWSYTPAISVCEN-GHKTV----GLYTRCPRCG--- 607 Query: 670 ASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG 712 ++ + R+ GY +N +Q+E + R + + G Sbjct: 608 -AKTEIWSRIIGYYRPVS--NWNPFRQKEFRMRTHYDNSLNKG 647 >UniRef50_C9RJ61 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ61_FIBSS Length = 542 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 153/596 (25%), Positives = 267/596 (44%), Gaps = 63/596 (10%) Query: 114 LNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMF 173 +NE AN + + V K + P + H +G IH HDL++ + + Sbjct: 1 MNELANIQKNTMSSILG-AGEKVCKSAVLDGI-PERFAEFHRQGYIHIHDLEF--YDKTY 56 Query: 174 NCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLA 233 NC+ + + ++ +I+ +ST + I + ++ GG D +A Sbjct: 57 NCIGVSVSDLVKD------TDIQ----VSTVLRRLYRGIVSLTNNQSGGIGFLDFDGDMA 106 Query: 234 PFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTF 293 + + + +AF++ ++N + P+ T Sbjct: 107 AYR-----------------------MDESDEILTEAFRNFFEDLNIYSRKGCEKPYTTL 143 Query: 294 GFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLA 353 G TS ++R I +++L + G K +FP +VF +N + PNYDI Q+A Sbjct: 144 NIGCRTSTKARRIAKAVLSAALEG-NSEGKPFIFPNIVFKYSRAINGTESSPNYDIFQMA 202 Query: 354 LECASKRMYPDILNYDQVVKVTGSF--KTPMGCRSFLGVWENENGEQIHDGRNNLGVISL 411 L+ + RM P N D + MGCR+ V + +G R N+ ++ Sbjct: 203 LKGTASRMIPTYFNCDAPFNRNANPNKIGIMGCRTR--VVADIHGNTTGLNRGNIACVTT 260 Query: 412 NLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLN 471 NL R+A+++ D F K + ++ L+ R A L +PI +E G+ L+ Sbjct: 261 NLVRLAIDSNHDFQVFLKKIGTLFEECKELLLHRFATLCK---GTSPIFAIEK--GLYLD 315 Query: 472 ADDDVSEIFKNGRASISLGYIGIHETINALFGGE--HVYDNEQLRAKGIAIVERLRQAVD 529 ++ +G ++S+G+IG+ + ++ L + V + K +A+++ +RQ VD Sbjct: 316 SEKGREVALMHG--TLSIGFIGLWDALSELLDTDFSDVDNLRMHHGKALAVLQVMRQKVD 373 Query: 530 QWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYD 589 + E++ FSL ++ +E F D E+G+ KG+YTNSFH+ V+ + ++ Sbjct: 374 SFIEQSHMNFSLLASAAEATTGIFADRDFKEYGIQCKSAAKGFYTNSFHIPVDTSIRLFE 433 Query: 590 KIDFEAPYPPLANGGFICYGEYPN-IQHNLKALEDVWDYS-YQHVPYYGTNTPIDECYEC 647 KI EAP+ L NGG I Y E +N+ A++ V +++ + Y+G N P+D+C C Sbjct: 434 KIQLEAPFHKLCNGGCISYVELDEQPCYNVGAIQKVVEFAMKNNCNYFGINFPLDQCNAC 493 Query: 648 GFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRV 703 G G G TC CG+ D R+ RRV GYL + R F GK+ E+ R Sbjct: 494 GHFGRI-----GDTCSSCGSSDILRL---RRVSGYLS--EKRAFTKGKKRELNLRK 539 >UniRef50_B5YJD4 Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=Bacteria RepID=B5YJD4_THEYD Length = 1385 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 105/533 (19%), Positives = 194/533 (36%), Gaps = 46/533 (8%) Query: 192 NAEIEPPKSISTATAVTAQIIAQVASHIYGG-----TTINRIDEVLAPFVTASYNKHRKT 246 E K TA AV A V GG I + E A + + Sbjct: 875 TVTEEEAKDFITAIAVLAGYNFNVRKRKMGGISKKLQYIITLTETKADHIMKIEKIEYRG 934 Query: 247 AEEWNIPDAEGYANSRTIKEC---YDAFQSLEYEVNTLHTANGQTPFVTF----GFGLGT 299 + E R + F ++ ++ Q + Sbjct: 935 IIWSVNTENETVIARRNGQVFITGNTPFSNITLDLKVPEHFVSQAVIIGGKTQDATYGEF 994 Query: 300 SWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASK 359 E + +++ G K + FP I + N + L ++ +K Sbjct: 995 QREMDMFNQALFEVLSEGDAKG-RVFTFPIPTINITKDFDW-----NSPVVDLIMQATAK 1048 Query: 360 RMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDG----RNNLGVISLNLPR 415 P NY ++ M CR L ++ G ++GV++++LPR Sbjct: 1049 YGIPYFANYVNSDLKPEDARS-MCCRLRLETKALKHRGGGLFGSNPLTGSIGVVTIDLPR 1107 Query: 416 IALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDD 475 I + E F++ L + +A+ +L + LE LY + + + Sbjct: 1108 IGYLSN-SEEEFYQRLLRLMEIAKTSLEIKRKVLERFTDSG---LYPYSKHYLS-SIKER 1162 Query: 476 VSEIFKNGRASISLGYIGIHETI-NALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEE 534 + N ++ +G IG++E I NA + E+ +A + +++ +R+ + ++++E Sbjct: 1163 AGAYWCNHFST--IGIIGMNEAIANARWLNSKGIWTEEGKAFALKVMDFMREKLLEYQKE 1220 Query: 535 TGYGFSLYSTPSENLCDRFCRLDTAEFG-VVPGVTDKGYYTNSFHLDVEKKVNPYDKIDF 593 TG ++L +TP+E R R+D ++ ++ ++ YYTNS L V + + +D Sbjct: 1221 TGNLYNLEATPAEGTSYRLARIDKQKYPDIITQGSEHPYYTNSTWLPVGFTESIHYILDN 1280 Query: 594 EAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ--HVPYYGTNTPIDECYECGFTG 651 + GG + + + + L+ ++ +PY C ECG+ Sbjct: 1281 QDELQSKYTGGTVQHIFLGE-KPEPQKLKRFIRQVFEKYTLPYISITPTFSVCSECGY-- 1337 Query: 652 EFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVK 704 + TCPKCG + RV GYL +N GK+EE K R Sbjct: 1338 ---IEGEHSTCPKCGRE----CEIYSRVVGYLRPVS--NWNEGKKEEFKDRKY 1381 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 10/225 (4%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVV---SEQMQGRNQVD 57 M +++KRDG VPF E+I AI +A KA D D + V +E++ Sbjct: 1 MFKNIIKRDGRIVPFDPEKITVAISKAGKATGEFDYDTAKRLTIKVLLLAEELIRDRDPH 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 + EIQ VE L+S PY++ A+AYI YR RE + E+ ++EN Sbjct: 61 VEEIQDIVEEILLSSPYRKTAKAYIIYRDQHARMREIARQGGLELIDNYLSKVDWRISEN 120 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 +N + + ++ ++K Y + P +V +AH GD+H HDL+ C+ Sbjct: 121 SNMSFS-LQGLNNYISSEISKSYWLHKIYPPEVREAHINGDMHIHDLNTLS----AYCVG 175 Query: 178 IDLKGMLTQGFK--MGNAEIEPPKSISTATAVTAQIIAQVASHIY 220 DL +L +GF G E P K + A + Y Sbjct: 176 WDLMDLLIRGFGGVPGKVESRPAKHLRPALGQIVNFLYTTQGECY 220 >UniRef50_D1JM33 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM33_9BACE Length = 733 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 146/763 (19%), Positives = 247/763 (32%), Gaps = 84/763 (11%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V KR G V F E+I AI +A + +V+ + V + IQ Sbjct: 1 MKVQKRTGQIVDFDLEKIGNAIKKAFDSKQVEYDPAIVKSVDKLISLTYTNVPVSVETIQ 60 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIER---EKRGRLNQEIRGLVEQTNASLLNENAN 119 VE LM Y +A+ +I YR R R E+ +NQ + ++S + NAN Sbjct: 61 DYVERVLMQFGYYDIAKTFILYREQRKSTRFVKERIDYMNQYSQSTDNAASSSETDGNAN 120 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHL-------LPRDVVQAHE---RGDIHYHDLDYSPF 169 K + + + RQ + P Q I+ HD +P Sbjct: 121 VTMKNVANLEGEVYKTTNRIIQRQRMKDELNILFPEVAKQYETDLDNHIIYTHDEASTPV 180 Query: 170 FPMFNCMLIDLKGMLTQGF-KMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRI 228 CM + L +LT+G + P + + + +I ++S G + Sbjct: 181 LKQ-YCMAVSLYPLLTEGVGNIDGVTPSEPNDLQSFSGQITNLIFLLSSQCKGAVAVGEY 239 Query: 229 DEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANG-Q 287 L +V + + AF+ + VN Q Sbjct: 240 FIALNYYVVKEFGDKWYEKLDCEASSPHCLIKRTVRDNILKAFKQFVWGVNQPAGNRSYQ 299 Query: 288 TPFVTFGFGLGTSWES----------------------RLIQESILRNRIAGLGKNRKTA 325 +PF + T + S R+ + + R+ + Sbjct: 300 SPFTNISYYDHTYFTSLFGEFCYPDGSKPEWIAIDTLQRMFMKWFNQIRLK------QVL 353 Query: 326 VFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCR 385 FP FA+ + D NY KQL E ++ + S CR Sbjct: 354 TFPVETFAMVHNGD-DIIDLNY--KQLCAEMYAE-GHSFFTYISDSADSLAS-----CCR 404 Query: 386 SFLGVWEN---ENGEQIHDGRNNLGVISLNLPRI----ALEAKGDEATFW--KLL---DE 433 + EN + VI+LN+ RI AL + K L Sbjct: 405 LRNELAENTFSPTSGLTGVMTGSCNVITLNINRIVQDWALTHTLNGTPLIKGKKLIGNPL 464 Query: 434 RLVLARKALMTRIARL-EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYI 492 R+ + L + R+ E V M + + ++G Sbjct: 465 RVTVIENDLKNYVTRILERVYKYHIAFKTMLYDLEDKGMFAASNGGYIHISKLYSTIGIN 524 Query: 493 GIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK---EETGYGFSLYSTPSENL 549 G++E L G V +N + I+ +++ + + F+ P+E L Sbjct: 525 GLNEAARFL--GMKVSNNPEYIEFLQLILGTIKEQNKLHSIHDRKRPFLFNSEVVPAEGL 582 Query: 550 CDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEA-PYPPLANGGFICY 608 + + D VVP D+ Y NS+ + + DK +GG + Sbjct: 583 GGKNYKWDKEGGYVVP--EDENLY-NSYFYNAHDDTSILDKFILHGHQTYQYTDGGSAAH 639 Query: 609 GEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNH 668 + + L+ + Y+ N P +C +CG TCP CG+H Sbjct: 640 INLEDHLSKEQYLKLIDFAIANGTNYFTFNIPNSKCEDCG----KIIKRPIDTCPCCGSH 695 Query: 669 DASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQI 711 + ++ RV GYL A F + +Q+E + R+ G Q+ Sbjct: 696 NITQ---YTRVIGYLRPTKA--FGSDRQQEARNRIYSDGKSQV 733 >UniRef50_D1SNH7 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SNH7_9EURY Length = 937 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 113/501 (22%), Positives = 204/501 (40%), Gaps = 46/501 (9%) Query: 223 TTINRIDEVLAPFVTASYNKHRKTAE------EWNIPDAEGYANSRTIKECYDAFQSLEY 276 + ID + ++ K K + + ++ D E + + I F S+ Sbjct: 459 VKVENIDNLDEAKLSKLEIKEIKEIDYNSYVYDLSVEDNENFITATGILCHNTIFSSINL 518 Query: 277 EVNTLHTANGQTPF---VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFA 333 E+ + T G E++LI E+++ + G K +FP + Sbjct: 519 ELEIPEFLKDKPAVMAGTTRGTYGDYEEEAKLILEALVDVMMEGDAMG-KPFLFPNFIIK 577 Query: 334 IRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWEN 393 +R+ D N ++ + ++K P +N +VT + MGCR+ L Sbjct: 578 LRENAFR---DENKELMYKIHQLSAKFGIPYFINMLPDWQVTNT--NAMGCRTRLSGNWT 632 Query: 394 ENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEG-- 451 + E N+ SLNLPRIA EA GD+ +++L ERL L ++AL+ + + Sbjct: 633 GDAEIDTLRTGNMQWYSLNLPRIAYEANGDDDKLFEILHERLELVKEALLIKHEVTKERL 692 Query: 452 VKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNE 511 + P L E D ++ + + G++G++E + G E +++++ Sbjct: 693 YVDNLMPFLTQE----------FDGESYYRYEHTTKTFGFVGLNEMLKYHLG-EELHESK 741 Query: 512 QLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGV-------- 563 G I+ +R+ D+ KEETG +++ TP+E+ R RLD + Sbjct: 742 DAVKFGEKIIGYIREYADKLKEETGLRWTVTQTPAESCAGRMARLDYKYYKEETISVVRG 801 Query: 564 VPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALED 623 D YYTNS H+ V+ + +K+ E + PL NGG I + + L D Sbjct: 802 DLNDVDSLYYTNSSHVRVDAPITLGEKVRIEEKFHPLCNGGHIMHVWNIESAADPDVLMD 861 Query: 624 VWDYS-YQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY 682 + + ++ + C +CG C CG+ D ++ R+ GY Sbjct: 862 ITKKITKTDIGFWTYTKNLSVCNKCG----LSMGGLRDRCINCGSEDIAKF---SRITGY 914 Query: 683 LGSPDARPFNAGKQEEVKRRV 703 L + +N KQ+E++ R Sbjct: 915 LQNIS--NWNKAKQKELEDRR 933 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 109/271 (40%), Gaps = 25/271 (9%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V + PF E+I +A++R A D + +A V +++ ++ + + Sbjct: 89 ILKVRTSEKEFEPFDKEKIVKALIRETGA----DKETAQKIADEVERELK---KLKVKYL 141 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 + ++++ Y + + R K RL + + + + ENAN Sbjct: 142 TAPMIREIVN---------YKLIEYGFEELRHKHTRLGMPVYDITKLIKSGS-RENANLM 191 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 + +A K YA + P+ + AH +GDIH HDL+Y+ P+ C+ DL+ Sbjct: 192 YNPESIHK-WVADETMKQYALLAIFPKHIADAHLKGDIHLHDLEYAATRPV--CLQHDLR 248 Query: 182 GMLTQGFKMG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 G K+ + +P K A A+++ +++ GG +I+ + LAP+V Sbjct: 249 PFFMYGLKVDGTGLHTSVSKPAKHPEVAIQHAAKVMMAAQTNMSGGQSIDEFNVWLAPYV 308 Query: 237 TASYNKHRKTAEEWNIPDAEGYANSRTIKEC 267 + K + I + +R + Sbjct: 309 RGLSYEKIKQLMQMFIYELNQMYVARGGQSL 339 >UniRef50_C8VXW8 Oxygen-sensitive ribonucleoside-triphosphate reductase-like protein n=2 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VXW8_DESAS Length = 788 Score = 352 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 101/634 (15%), Positives = 209/634 (32%), Gaps = 58/634 (9%) Query: 91 EREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKH-YARQHLLPR- 148 + G+++ + + +N NAN++ Q ++ GI+ Y + Sbjct: 189 RKVDVGQMSHDYFTKRLADASVDVNANANEELSANNYQAEVTKGILKLEGYYLLWRYSKK 248 Query: 149 --------DVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKS 200 ++++A G++++HD + C ++T+G G PP Sbjct: 249 RFGTRRANELIKAIWNGELYFHDASGYGVQ-LPYCFAYSTANLMTEGRMYGQLYSLPPNR 307 Query: 201 ISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYAN 260 + A + ++ G L ++ + I + Sbjct: 308 SDSFVAQVIETTMDLSQEFVGAVAPGDFIVNLCWYLEREGIDTESSEGRKYIENLWQKFI 367 Query: 261 SRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQ---ESILRNRIAG 317 + + QS V+ N + F + + G+ I + I G Sbjct: 368 HVMNNKFRVSGQSPFTNVSIFDRENLKKLFTDYRYPDGSEVNIDYIMDVQKIIAEFFSKG 427 Query: 318 LGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGS 377 FP + + N D D + ++ +I + Sbjct: 428 DPSTGLPYRFPVMTVNLSVDENRNPLD--LDFLDFVAKTNTQLGIYNI-------YINEG 478 Query: 378 FKTPMGCRSFLGVWE--NENGEQIHDGRNNLG---VISLNLPRIALEAKGDEATFWKLLD 432 K M CR + N + +G N+G V+++N PRIA+EAK F+ +LD Sbjct: 479 SKIAMCCRFSPSTNQRMNYRVDTFGNGGLNIGSHRVVTINFPRIAMEAK-SREDFFNILD 537 Query: 433 ERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYI 492 R +A+ L+ + + + + L+ ++G Sbjct: 538 SRTKMAKDLLLVHREEILRRRVERGFLKFFNPLKWFNLDMLFS------------TIGIH 585 Query: 493 GIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDR 552 G++E + L +N + A+++++ + +ETG+ F+ P+E+ Sbjct: 586 GLYEMCHFL---GFDMENLAGQDFTEAVLKKIEDYALAFSKETGHSFNTEEIPAESTAVT 642 Query: 553 FCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYP 612 + D +G Y+N + + + ++ D+I + +GG I + Sbjct: 643 LAKKDRIIYGEDKQPFA--LYSNQY-IPLIADMDTIDRIKLTGRFMKYVSGGGILHLNVQ 699 Query: 613 NIQHNLKALEDVWDYS-YQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDAS 671 + N ++ + + V ++ N C E G G CP CG Sbjct: 700 DRVTNPDTMKKLILMCLKEGVEHFAVNYGFGICSE----GHTSIVGNGKVCPICGKPID- 754 Query: 672 RVSVTRRVCGYLGSPDARPFNAGKQE-EVKRRVK 704 RV GY + + ++ E +RR Sbjct: 755 --DYLTRVIGYFSKTSS--WGDVRKNYEFERRRF 784 >UniRef50_A5D0B0 Oxygen-sensitive ribonucleoside-triphosphate reductase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0B0_PELTS Length = 631 Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats. Identities = 98/617 (15%), Positives = 209/617 (33%), Gaps = 54/617 (8%) Query: 91 EREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKH-YARQHLLPR- 148 + G+++ + ++ +N NAN++ Q ++ G++ Y + Sbjct: 36 RKVDVGQMSHDYFTKRLADSSVDMNANANEELSANNYQAEVTKGLLKLEGYYLLWRYSKK 95 Query: 149 --------DVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKS 200 +++ A RG++++HD + C ++ +G G PP+ Sbjct: 96 RFDTRRANELISAIWRGELYFHDASGHGVQ-VPYCFAYSTANLMVEGRPYGQLHSTPPRR 154 Query: 201 ISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYAN 260 + A + ++ G L ++ + + + I + Sbjct: 155 SDSFVAQVIETTMDLSQEFVGAVAPGDFIVNLCWYLKREGIEPGREDGQKYIENQWQKFV 214 Query: 261 SRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQ---ESILRNRIAG 317 + + QS ++ N Q F + + GT + + + + G Sbjct: 215 HVMNNKFRVSGQSPFSNISIFDRVNLQKLFEGYRYPDGTPVDIEYVMEVQKIVAEYFAQG 274 Query: 318 LGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGS 377 K FP L + N + DP D K +I Sbjct: 275 DPKTGLPYRFPVLTANLSVDENRRPLDP--DFVDFVARTNIKLGVYNI-------YANEG 325 Query: 378 FKTPMGCRSFLGVWE-NENGEQIHDGRNNLG---VISLNLPRIALEAKGDEATFWKLLDE 433 K M CR + + +G N+G V+++N PRIALE + F+++LD+ Sbjct: 326 SKIAMCCRFINDTGRMDYRADSFGNGGLNIGSHRVVTINFPRIALETE-SRKHFFEILDK 384 Query: 434 RLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIG 493 R+ AR L+ + + + + + L+ ++G G Sbjct: 385 RVKAARDLLLVHREEILRRRVERGFLKFFKPLRWFTLDMLFS------------TIGIHG 432 Query: 494 IHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRF 553 ++E F G + + E +A +++ ++ ETG+ F+ P+E+ Sbjct: 433 LYEMC--HFAGLRMEE-EGGQAFSEEVLKVTDGYALEFSRETGHSFNTEEIPAESTAVTL 489 Query: 554 CRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPN 613 D +G + Y+N + + + ++ D++ + +GG I + + Sbjct: 490 AGKDRVLYGDILQPFS--LYSNQY-IPLIADMDAVDRVKLTGRFMKHVSGGGILHLNIQD 546 Query: 614 IQHNLKALEDVWDYS-YQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASR 672 + ++ + + + V ++ N C + G G TCP CG Sbjct: 547 RIQSPDTMKRLMLLALKEGVEHFAINYGFGICTQ----GHTSVVGTGKTCPVCGEPIEDH 602 Query: 673 VSVTRRVCGYLGSPDAR 689 + RV GY + Sbjct: 603 L---TRVIGYFTKVSVK 616 >UniRef50_B1L9A6 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Thermotogaceae RepID=B1L9A6_THESQ Length = 651 Score = 321 bits (823), Expect = 5e-86, Method: Composition-based stats. Identities = 127/698 (18%), Positives = 228/698 (32%), Gaps = 126/698 (18%) Query: 70 MSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQR 129 L Y D ++ + + S ++ NAN I T Sbjct: 11 FEELMSDLLSKYGYEMFQMDGLGDQLDVVKFTEDFVRRGIIESTIDANANVRVTNISTYF 70 Query: 130 DLLAGIVAKHYARQHLLPR-----------DVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 ++ Y+ + + + V+A G ++ HD ++ P C Sbjct: 71 IEISKPHTYLYSLYRIWQKMKEMFGKEVADEFVEAQINGAVYLHDRHHAALMPY--CFAY 128 Query: 179 DLKGMLTQGFK-MGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 L+ ++ +G + + EP K +ST Q + ++ G + + FV Sbjct: 129 TLQPIVEKGLPFIKTIKSEPAKHLSTFIQHVIQFVMFASNQSSGAVGLPDFFVWMWYFVK 188 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGL 297 K EE IP + FQ L Y +N Q+P+ F + Sbjct: 189 -------KDLEEGIIP------RDKLDWYIEQHFQILTYSLNQPIRT-TQSPYTNFTY-- 232 Query: 298 GTSWESRLIQESILRNRIAGLG------------------------KNRKTAVFPKLVFA 333 R ++I G + R+ FP L + Sbjct: 233 ----LDRNYIKAIFEGERYPDGSLITDHVEDIIALQKHYWEWVSKERERQMFTFPVLTAS 288 Query: 334 I--RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 + RDG + D + + K + D + V CR Sbjct: 289 LLYRDGKFLDE-----DSARFINKINMKWQDTNWYISDSIDAVAS------CCRLTSSTQ 337 Query: 392 ENEN------GEQIHDGR-----------NNLGVISLNLPRIALEAKGDEATFWKLLDER 434 + E+ GR + VI++NLPRIALE+ GD + ++L R Sbjct: 338 TLKKFSLSSEEEEKLKGRMNSIGGSDLNIGSFKVITMNLPRIALESGGDREKYLQILRHR 397 Query: 435 LVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGI 494 + L +KAL ++ + LY G + R ++G G+ Sbjct: 398 VQLIKKALAAVREIIKERISEGLLPLYENG--------------LMLLNRQYGTIGVTGV 443 Query: 495 HETINALFGGEHVYD----NEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLC 550 E+ + + D E+ +++ +R+ ++ E G+ F++ P+E Sbjct: 444 WESASIMGLTTEDIDGLKYTEEGEVFVDNVLDTIREEAEKGYHEYGFTFNIEQVPAEKAA 503 Query: 551 DRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGE 610 + D FG Y+N + + + + ++I + + +GG I + Sbjct: 504 VTLAQKDRFLFGEKQPF---EIYSNQW-VPLMANTDVLNRIRYSGKWDKKVSGGAILHIN 559 Query: 611 YPNIQHNLKALEDVWDYSYQ-HVPYYGTNTPIDECYE-CGFTGEFECTSKGFTCPKCGNH 668 + ++ V Y+ NT I C + F GE CP CG Sbjct: 560 LGESFKTEEESFNMVKMIADMGVMYFAFNTKISVCEDGHAFYGE--------RCPVCGK- 610 Query: 669 DASRVSVTRRVCGYLGSPDARPFNAGKQE-EVKRRVKH 705 ++V R+ GYL A FN ++E E RR + Sbjct: 611 --AKVDEYMRIVGYLVPVSA--FNKERREIEYPRRQFY 644 >UniRef50_B2V5I1 Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=cellular organisms RepID=B2V5I1_SULSY Length = 665 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 109/672 (16%), Positives = 199/672 (29%), Gaps = 124/672 (18%) Query: 117 NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCM 176 NAN + ++LAG K Y + +L + + H+ G + H L C+ Sbjct: 20 NANFIYSLPA-LANILAGEAFKSYMLEEILTEEEARMHKEGWWYQHQLALLS----PYCL 74 Query: 177 LIDLKGMLTQGFKMG---NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLA 233 K + G + P K + T + I +A + G +N I + Sbjct: 75 GYSAKDISIYGISSTSNVTPKSRPAKRLKTFLDQCSNFICLMAQELSGAVALNDIITIAT 134 Query: 234 PFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTF 293 +V Y ++ K + ++ Y AFQS Y VN + +PF Sbjct: 135 SYV--WYEENLKDR-------------KYSDEDLYHAFQSFLYNVNLPFRSGN-SPFTNV 178 Query: 294 G--FGLGTSWESRLIQES-----------------------ILRNRIAGLGKNRKTAVFP 328 FG LR G + + FP Sbjct: 179 TLEFGRPAYHLKDEFITIDGEVLDKTYSEIPSDYYNKTVLGFLRAMWEGDAEG-RPWTFP 237 Query: 329 KLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYD-QVVKVTG------SFKTP 381 + I D + + I + L+ K N+ + G + + Sbjct: 238 LITVQITDDFDFEN-----PIFKQFLDNLDKHGGAYFENFMSKPFIEAGLEPRDPALQRS 292 Query: 382 MGCRSF------LGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERL 435 CR L V + G ++GVIS+N R+ +G++ ++ L + L Sbjct: 293 FCCRFQIDIKDILKVSNLRSIFGSVSGVGSIGVISINFNRLGYIHRGNKEKLFEHLKDIL 352 Query: 436 VLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIH 495 AR L + +E K Y N I+ G++ Sbjct: 353 SKARNVLNKKRKFIEEYKKLYPTFFYYIKDLSTMFNTISIQGG----HEGLINFGFVKYD 408 Query: 496 ETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCR 555 E+ + + + + + + + + +D++ +E G ++ P E + Sbjct: 409 ESGK-MIEEDSGIFHPEGINFAKEVADFILKTLDEFMKEDGIPWNFEYAPGETAAPVLGQ 467 Query: 556 LDTAEFGVVPGVTDKGY--YTN-----------------------SFHLDVEKKVNPYDK 590 D + + + + Y N S + + Sbjct: 468 KDLEFYNAIKSGDNSKFLLYKNYQKIHDFPPFVKGSLEGSGVFLTSGFQPPFDGSSLAKQ 527 Query: 591 IDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWD--YSYQHVPYYGTNTPIDECYECG 648 ID A A GG I + L +S + + Y + C CG Sbjct: 528 IDVSAKTQRFATGGSIQHIFLNEKTE-GDVLARFIKNLFSKRTIIYITITPTLTICNNCG 586 Query: 649 FTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSP----------------DARPFN 692 + + CP CG+ D + + RV GY + + Sbjct: 587 RK----IVGERYVCPYCGSEDTT---IYSRVIGYYRPIARKVIKAEKDKYLFEGEENYWQ 639 Query: 693 AGKQEEVKRRVK 704 G++ + R K Sbjct: 640 GGRRADWITRKK 651 >UniRef50_A3MYN5 Anaerobic ribonucleoside triphosphate reductase n=26 Tax=Bacteria RepID=A3MYN5_ACTP2 Length = 619 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 97/631 (15%), Positives = 186/631 (29%), Gaps = 91/631 (14%) Query: 88 RDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAG---------IVAK 138 + + E + + + S ++ NAN K I T + + V+ Sbjct: 5 QPNQLEGKLSFIEHYLHAKNAADGSKMDANANVTQKNIATMENEMMKDFFVQINRAKVSN 64 Query: 139 HYAR--QHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIE 196 A L + ++ E +I+ HD C+ + + L G E + Sbjct: 65 KIAELFDEELAGEYLRQIESHEIYVHDE----TSLKPYCVSVTMYPFLHDGLTKLGGESK 120 Query: 197 PPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAE 256 PK +++ + V+S G F + + T Sbjct: 121 APKHLASFCGSFVNFVFAVSSQFAGAVATVEFLTYFDYFARKDFGDNYLTTH-------- 172 Query: 257 GYANSRTIKECYDAFQSLEYEVNTLHTANG-QTPFVTFGFGLGTSWESRLIQESILRNRI 315 E + Q + Y +N A G Q+ F E++ N + Sbjct: 173 -------RSEIENHLQQVVYSINQPAAARGYQSVFWNISLYDKH------YFEAMFGNFV 219 Query: 316 AGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMY-PDILNYDQVVKV 374 + L N ++ + ++ D DQ+ + Sbjct: 220 FPDFERPNWETTAALQIFFMKWFNQERSKAILTFPVVTAAMLTENGKCKDNEFADQMAEE 279 Query: 375 TGSFKT------------PMGCRSFLGVWENENGEQIHDG---RNNLGVISLNLPRIALE 419 + CR + ++ + G ++ VI++N+ R+ + Sbjct: 280 LSQGNSFFIYQSDNPDSLASCCRLRNEISDHTFSYSLGAGGVATGSINVITINMNRLVQD 339 Query: 420 AKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEI 479 + L+E + K +E A +Y G + Sbjct: 340 GRD--------LEEEVGKIHKYQYAYRKLMEEYLAAGMLPVYDAGFISLDKQF------- 384 Query: 480 FKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGF 539 +++G G+ E G V N + ++ + +A ++ G F Sbjct: 385 -------LTIGINGMAEAAE--SQGLTVGYNSDYMQFVQSRLKVIFEANQTASKKYGVKF 435 Query: 540 SLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDV-EKKVNPYDKIDFEAP-Y 597 + P+ENL + + D A+ VP + Y NS+ V ++ N DK Sbjct: 436 NTEFVPAENLGVKNAKWDKADGYFVP----RDCY-NSYFYVVEDENTNALDKFLLHGKEL 490 Query: 598 PPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTS 657 +GG + + + Y+ N I C EC + Sbjct: 491 IEWLDGGSALHLNLDEALTQSGYRSLLDIAAKTGCNYFCINVKITICNECSHIDKRTLC- 549 Query: 658 KGFTCPKCGNHDASRVSVTRRVCGYLGSPDA 688 +C KCG+ + + RV GYL A Sbjct: 550 ---SCSKCGSQN---IDYGTRVIGYLKRVSA 574 >UniRef50_B8D5R3 Anaerobic ribonucleoside triphosphate reductase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5R3_DESK1 Length = 848 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 69/321 (21%), Positives = 128/321 (39%), Gaps = 35/321 (10%) Query: 398 QIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVA 457 + D ++ V+ +N+PR+ALEA+G++ FW+L DE L L R+A+ AR + Sbjct: 550 AMPDITGSVNVVDINIPRLALEARGNDTRFWELYDEALKLVREAVDWFRARYVKILKEHP 609 Query: 458 PILYMEGACGVRLNADDDVSEIFKNGRASI--SLGYIGIHETINALFGGEHVY------D 509 YM ++E +S ++G IG+ E L ++ D Sbjct: 610 NFYYM-------------ITEYMPEFPSSHFNTIGLIGLPEAAAILLQEPKLWLDGNRSD 656 Query: 510 NEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVT- 568 + +VE +W +E+G +++ P+E+ + LD + + Sbjct: 657 WLRATELMRKMVEHATNTARRWMQESGTPWNVEEVPAESASPKMAALDMKLYPELADYLP 716 Query: 569 --DKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWD 626 D Y+ S ++ D+I+ EA GG + + + AL + Sbjct: 717 DPDNPVYSTSIAPYYAPEMELPDRIEVEARVQKYFTGGVMMHIFLAE-EPEPDALAKLAK 775 Query: 627 YSYQ-HVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGS 685 + Y+ + C CG T T +CP+CGN + + V R+ GY Sbjct: 776 RIMDTDIVYWSFTPALTYCPSCGRT----YTGLYKSCPRCGNEN---IEVWSRIIGYYRP 828 Query: 686 PDARPFNAGKQEEVKRRVKHL 706 + +N +++E R ++ Sbjct: 829 --IKNWNPQRRKEFWTRNHYV 847 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 104/337 (30%), Gaps = 57/337 (16%) Query: 84 YRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQ 143 YR + + V+ ++ + NENANK LL + + Sbjct: 11 YRRCLMQSSKVDTDMRDPFIEFVKWSSLDV-NENANKYMGPGSFFSYLLEEYMKRDIL-- 67 Query: 144 HLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSIST 203 LLP +++AH G I+ H L S + P C + +L +G K P + T Sbjct: 68 GLLPSHILKAHRDGLIYIHKLPQSIYIPY--CTGHSMARLLEKGLKTPTVISRPARHFDT 125 Query: 204 ATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRT 263 A + + + G + ++ PF+ + + Sbjct: 126 FVDHVANYLITLQHYFTGAQAFSSVEWYAGPFIRSDGLDY-------------------- 165 Query: 264 IKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLG-----------------------TS 300 + Q L Y +N QTPF F + Sbjct: 166 -RGVKQNIQRLLYNLNYPTRIGLQTPFTNFTIIMDASRKALEGDYAVYDGKKTEPLGAYE 224 Query: 301 WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR 360 E+++ ++ N + G + FP L + DP +I + E A+KR Sbjct: 225 KEAKIFLLALFENYMNGDSVG-QPFTFPIPTLMTTSKLLWE--DP--EIYEAVFETAAKR 279 Query: 361 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGE 397 LN V M S + N +GE Sbjct: 280 GSFYWLNTRVVDP---DASYAMCLHSGEKIPINNDGE 313 >UniRef50_Q58242 Mja rnr-2 intein n=3 Tax=Methanococcales RepID=Y832_METJA Length = 1750 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 70/305 (22%), Positives = 134/305 (43%), Gaps = 22/305 (7%) Query: 249 EWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF---VTFGFGLGTSWESRL 305 + ++ D E + + I F S+ E+ + T G E++L Sbjct: 771 DLSVEDNENFITATGILCHNTIFSSINLELEIPEFLKDKPAVIAGTTRGTYGDYEEEAKL 830 Query: 306 IQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDI 365 I E+++ + G K +FP + +R+ D N ++ + ++K P Sbjct: 831 ILEALVDVMMEGDAMG-KPFLFPNFIIKLRENAFK---DENKELMYKIHQLSAKFGIPYF 886 Query: 366 LNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEA 425 +N +VT + MGCR+ L + E N+ SLNLPRIA EA GD+ Sbjct: 887 INMLPDWQVTNT--NAMGCRTRLSGNWTGDAEIDTLRTGNMQWYSLNLPRIAYEANGDDT 944 Query: 426 TFWKLLDERLVLARKALMTRIARLEG--VKARVAPILYMEGACGVRLNADDDVSEIFKNG 483 +++L ERL + ++AL+ + + + P L E D ++ Sbjct: 945 KLFEILHERLEILKEALLIKHEVTKERLYVDNLMPFLTQE----------FDGESYYRYE 994 Query: 484 RASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYS 543 + + G++G++E + G E +++++ G ++E +R+ D+ KEETG +++ Sbjct: 995 NTTKTFGFVGLNEMLKYHLG-EELHESKDAVKFGEKVIEYIREYADKLKEETGLRWTVTQ 1053 Query: 544 TPSEN 548 TP+E+ Sbjct: 1054 TPAES 1058 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 108/273 (39%), Gaps = 25/273 (9%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V + F E+I +A++R A D + +A V +++ ++ + + Sbjct: 89 ILKVRTSEKEFESFDKEKIAKALIRETGA----DEETARKIADEVERELK---KLKVKYL 141 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 + ++++ Y + + R K RL + + + + ENAN Sbjct: 142 TAPMIREIVN---------YKLIEYGFEELRHKHTRLGMPVYDITKLIKSGS-RENANLM 191 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 + +A K YA + P+ + AH +GDIH HDL+Y+ P+ C+ DL+ Sbjct: 192 YNPESIHK-WVADETMKQYALLAIFPKHIADAHIKGDIHLHDLEYAATRPV--CLQHDLR 248 Query: 182 GMLTQGFKMG-----NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 G K+ + +P K A A+++ +++ GG +I+ + LAP+V Sbjct: 249 PFFKYGLKVDGTGLHTSVSKPAKHPEVAIQHAAKVMMAAQTNMSGGQSIDEFNVWLAPYV 308 Query: 237 TASYNKHRKTAEEWNIPDAEGYANSRTIKECYD 269 + K + I + +R + Sbjct: 309 RGLSYEKIKQLMQMFIYELNQMYVARGGQSLGR 341 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 70/189 (37%), Gaps = 28/189 (14%) Query: 534 ETGYGFSLYSTP----SEN------LCDRFCRLDTAEFGV--------VPGVTDKGYYTN 575 E Y S+ T E RF RLD + D YYTN Sbjct: 1567 EYVYDISVEGTENFIGGEGFICLHNTAGRFARLDYKYYKEETISVVRGDLNDVDSLYYTN 1626 Query: 576 SFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYS-YQHVPY 634 S H+ V+ + +K+ E + PL NGG I + + + L D+ H+ + Sbjct: 1627 SSHVRVDAPITLGEKVRIEEKFHPLCNGGHIMHIWNIESAADPEVLMDITKKITKTHIGF 1686 Query: 635 YGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAG 694 + + C CG C CG+ D ++ R+ GYL + +N Sbjct: 1687 WTYTKNLSVCNRCG----ISMGGLRDRCINCGSEDVAKF---SRITGYLQNIS--NWNRA 1737 Query: 695 KQEEVKRRV 703 KQ+E++ R Sbjct: 1738 KQKELEDRK 1746 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 108/342 (31%), Gaps = 72/342 (21%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 M +V+KRD K F + + ++ + V+ D ++ V ++ G + +E Sbjct: 12 MEFYVIKRDKRKEKFNVNK----LAKSLINSGVNYGDLDTIISEVCAKVYNG---ITTDE 64 Query: 61 IQTAVENQLMSGPYKQLARAYIEY--RHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 ++ V N L K +A Y R E+E ++I + + + Sbjct: 65 LKDIVYNVL-KKIDKDVAENYRNGIILKVRTSEKEFESFDKEKIAKALIRETGADEETAR 123 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 +V + L + R+ ++ +++ H H P + Sbjct: 124 KIADEVERELKKLKVKYLTAPMIRE-IVNYKLIEYGFEELRHKHTRLGMPVY-------- 174 Query: 179 DLKGMLTQGFKMGNAEIEPPKSI--STAT------AVTAQIIAQVA-SHIYGGTTINRID 229 D+ ++ G + + P+SI A A+ A +A +HI G ++ ++ Sbjct: 175 DITKLIKSGSRENANLMYNPESIHKWVADETMKQYALLAIFPKHIADAHIKGDIHLHDLE 234 Query: 230 ----------EVLAPFVTA-----------SYNKHRK----------------------- 245 L PF S +K K Sbjct: 235 YAATRPVCLQHDLRPFFKYGLKVDGTGLHTSVSKPAKHPEVAIQHAAKVMMAAQTNMSGG 294 Query: 246 TAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQ 287 + + Y + ++ Q YE+N ++ A G Sbjct: 295 QSIDEFNVWLAPYVRGLSYEKIKQLMQMFIYELNQMYVARGG 336 >UniRef50_B3TA58 Putative ATP cone domain protein n=6 Tax=environmental samples RepID=B3TA58_9ARCH Length = 745 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 111/681 (16%), Positives = 231/681 (33%), Gaps = 120/681 (17%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQ--VDINE 60 +V F +++I ++++R + + V ++ + + Sbjct: 167 MYVRTSHDSIEEFNTQKIIQSLVRE----GSLPLELAQKITEEVENRIYKYQTAYLTGSL 222 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 I+ V + L+ Y + R K R+ + + E + + N Sbjct: 223 IRELVNSVLLEHGY--------------EEYRHKLARVGLPVFEVQEMISNAE-----NV 263 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 D + IV + LP+D+ AH GD+H + P + + I++ Sbjct: 264 DDGIE-GLLFKAGQIVFAEHLLTSTLPKDMADAHLSGDLHITNPGLWSILP--DTIFINV 320 Query: 181 KGMLTQGFKM-----GNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 K ++ G + G I K+++ ++ + IIA ++ ++ + +L Sbjct: 321 KTLIEDGIDLKGKHLGVCRIPSVKTLNNLSSALSMIIALISKEASQEVVLDDLIPLL--- 377 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF 295 ++ K E ++ D+F + + + N + V+F Sbjct: 378 -----TRYSKDLHEL-------------ERKLVDSFTTS----SVIVGYNKMSTVVSFRI 415 Query: 296 GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGL--NHKKGDPNYDIKQLA 353 LGT + I +++L + KL ++ GL +++KG Sbjct: 416 PLGTEQK---IVKTVLSAYK----------TYAKLTPILKIGLVIDYEKG---------- 452 Query: 354 LECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNL 413 R+ +++ + G S G+ +N +L S+NL Sbjct: 453 ------RITDVSEILSEIITLGGKVMFAKHKTSQKGIICPKNSTSTVLHLGSL---SINL 503 Query: 414 PRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVA-PILYMEGACGVRLNA 472 PR+A E+ DE F L + A ++ R + + PIL Sbjct: 504 PRLAFESNKDETYFRARLALLMRPALDSMALRKKSVSNLIRLGFNPILAAN--------- 554 Query: 473 DDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK 532 ++ + S+ + +G+ + +G D+++ + ++E + Sbjct: 555 ----TQNMQRSVVSLVINLVGLPNAV---YGILGFKDDKKGQGILHKVIETAVDIASKKD 607 Query: 533 EETGYGFSLYSTPSENLCDRFCRLDTAEFG--VVPGVTDKGYYTNSFHLDVEKKVNPYDK 590 ++ G + T S+ +RF LD ++G V +TD Y+ LD++K + K Sbjct: 608 KDLGINIIVCMTESDG-SERFIALDGGKYGKNSVLQITDTETYSQGLVLDIDKLSSLTGK 666 Query: 591 IDFEAPYP---PLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYEC 647 Y + NG F+ P ++ V + + + C C Sbjct: 667 SAVITEYNKIGKILNGSFLIQITIPKGTKAGD-IKKVIEKGASITSSFKPVMQVLICGNC 725 Query: 648 GFTGEFECTSKGFTCPKCGNH 668 GF E CP C + Sbjct: 726 GFKDE----KLEDKCPACKST 742 >UniRef50_A9A646 Regulatory protein ArsR n=4 Tax=Archaea RepID=A9A646_NITMS Length = 723 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 109/681 (16%), Positives = 225/681 (33%), Gaps = 118/681 (17%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDINE 60 +V F S +I ++++R + + V ++ + + Sbjct: 143 MYVRTSHESIEEFNSHKIIQSLVRE----GSLPLELAQKITEEVENRIYKYQTTYLTGSL 198 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 I+ V + L+ + + R K RL + + E +N Sbjct: 199 IREMVNSVLLEHGH--------------EEYRNKLARLGLPVFDVQEMITNLDNVDNG-- 242 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 V + ++LP+DV +H GD+H + P + M +++ Sbjct: 243 ----AEGLLFKTGQTVFAEHLLTNILPKDVADSHLSGDLHITNPGIWSMIP--DTMFVNI 296 Query: 181 KGMLTQGFKMGN-----AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 K ++ G +G + I K + T+ + +++ ++ ++ + Sbjct: 297 KELIEDGIDLGGKYLDVSRIPASKQLDEITSALSIVVSLLSKEASQEIILDGFVSL---- 352 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF 295 ++KH K+ E +A + T + N + V+ Sbjct: 353 ----FSKHSKSLPELEQKLTTAFATASTTSK-----------------YNKSSTNVSIRL 391 Query: 296 GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALE 355 LG+ + I SI+ + KL + GL I ++ Sbjct: 392 QLGSDTK---IINSIINAYKN----------YTKLTPIPKIGLIIDNEK--GKITDVSAA 436 Query: 356 CASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGV--ISLNL 413 + +++ + G G S G+ NG G ++ + +S+NL Sbjct: 437 VS------------EIISLGGKVMFAKGQTSSHGIT---NGSTKSSGPLSIMLESVSINL 481 Query: 414 PRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARV-APILYMEGACGVRLNA 472 PR+A E+ DE F L + A ++ R + + R PIL Sbjct: 482 PRLAFESNKDETYFRARLALLMKPALSSMALRKKDISDLTRRGLNPILAKN--------- 532 Query: 473 DDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWK 532 ++ + S+ + +G+ E + + G DN++ R ++E + Sbjct: 533 ----TQYMQKSNVSLVINLVGLKEAVFNILG---FQDNKEGREILHKVIETAVDVGAKKG 585 Query: 533 EETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVT--DKGYYTNSFHLDVEKKVNPYDK 590 +E G ++ T +E+ RF LD ++G + + Y+ +D + + K Sbjct: 586 KELGDPVAICMTETESAT-RFATLDGEKYGKNSSLNSMEGDSYSEGIIIDASEVSDYTAK 644 Query: 591 IDFEA---PYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYEC 647 + + L NGG + ++ + + + + I C EC Sbjct: 645 SEPISECNKLSKLLNGG-LFVTLNIGKDAKPAEIKKAIEKTSELTTSFKPVQDIAICGEC 703 Query: 648 GFTGEFECTSKGFTCPKCGNH 668 GF E CPKC + Sbjct: 704 GFKDEPF----EDKCPKCKSP 720 >UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=Mycobacterium RepID=A1KG47_MYCBP Length = 710 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 115/566 (20%), Positives = 191/566 (33%), Gaps = 77/566 (13%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V +RDG VPF RI+ A+ RAA+ DD D TVA V++ + GR + +I Sbjct: 6 PAKVRRRDGTLVPFDIARIEAAVTRAAREVACDDPDMPGTVAKAVADAL-GRGIAPVEDI 64 Query: 62 QTAVENQLMSGPYKQLARAYIEYRHDRDIEREK------RGRLNQEIRGLVEQTNASLLN 115 Q VE +L +AR YI YR R R R L + + LL+ Sbjct: 65 QDCVEARLGEAGLDDVARVYIIYRQRRAELRTAKALLGVRDELKLSLAAVTVLRERYLLH 124 Query: 116 ENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 + + ++ D A VA A P + ER +L++ P P Sbjct: 125 DEQGRPAESTGELMDRSARCVAA--AEDQYEPGSSRRWAERFATLLRNLEFLPNSPTLMN 182 Query: 176 MLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 DL G+L F + + +SI A++ GG T + Sbjct: 183 SGTDL-GLLAGCFVLPIEDSL--QSIFATLGQAAEL------QRAGGGTGYAFSHLRPAG 233 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF 295 + + + + A ++ +V+ + T Sbjct: 234 DRVASTGGTASGPVSFLRLYDSAAGVVSMGGRRRGACMAVLDVSHPDICDFVTAKAESPS 293 Query: 296 GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALE 355 L S + ++ LR K+V + P ++ + Sbjct: 294 ELPHFNLSVGVTDAFLRAVERNGLHRLVNPRTGKIVARM----------PAAELFDAICK 343 Query: 356 CASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPR 415 A P ++ D + + P+ R + N GE + + S+NL R Sbjct: 344 AAHAGGDPGLVFLDTINRA-----NPVPGRGRIEAT-NPCGEVPLLPYESCNLGSINLAR 397 Query: 416 IALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDD 475 + + + D W L+E +A + L I P Sbjct: 398 MLADGRVD----WDRLEEVAGVAVRFLDDVIDV------SRYPFP--------------- 432 Query: 476 VSEIFKNGRAS--ISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAV----D 529 E+ + RA+ I LG +G+ E + AL G YD+E+ ++ R++QA Sbjct: 433 --ELGEAARATRKIGLGVMGLAELLAAL-GIP--YDSEEAVRLATRLMRRIQQAAHTASR 487 Query: 530 QWKEETGYGFSLYSTPSENLCDRFCR 555 + EE G + P+ RF R Sbjct: 488 RLAEERG------AFPAFTDS-RFAR 506 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 85/455 (18%), Positives = 141/455 (30%), Gaps = 84/455 (18%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVS---EQMQGRNQVDI 58 VMKRDG VPF RI+ AI RA V D V V ++ I Sbjct: 3 VEKVMKRDGRIVPFDEGRIRWAIQRAMWEVGVRDEKLLDKVVKDVVGRINELYDGKIPHI 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE-----------IRGLVE 107 IQ VE +LM +A+AYI YR + RE++ ++ + I L Sbjct: 63 ENIQDIVELELMRNGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSINALRV 122 Query: 108 QTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYS 167 + L+ N++ K+I + R+L + L V DL Sbjct: 123 LASRYLMK---NEEGKIIESPRELFERVAILAVIPDLLYDDRVFSKEGGFA---QDLKRV 176 Query: 168 PFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINR 227 ++ + +G ++ + ++ G Sbjct: 177 DYYREHL-------DEFDKKLSIGRFKLNK--------YHFERFLSLYQELAEKGQMKVS 221 Query: 228 IDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQ 287 IDE++ +++K+ K +E + + + NT N Sbjct: 222 IDEIVKMLEDGAFDKYEKEI-----------------EEYFRLMTNQIFMPNTPALINAG 264 Query: 288 TPFVTFG--FGLGTSWESRLIQESILRN-RIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD 344 P F + + I ++ I +G G+N K Sbjct: 265 RPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGG--------------TGVNFSKLR 310 Query: 345 PNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS-----FLGVWENENGEQI 399 P D+ AS +++ ++ G R L VW + + I Sbjct: 311 PEGDLVGTTTGAAS-----GPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDIEKFI 365 Query: 400 HDGRNNLGVISL-NLPRIALEAKGDEATFWKLLDE 433 H N+G L N + G FW+ L E Sbjct: 366 HAKEKNIGTNVLSNFN----ISVGIWEDFWEALKE 396 >UniRef50_D2MLR7 ATP cone domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLR7_9FIRM Length = 511 Score = 208 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 134/364 (36%), Gaps = 64/364 (17%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEV-DDADYCATVAAVVSEQMQGR---NQVDIN 59 V KRD F+ ++IK AI +A ++ + +A + + + + + Sbjct: 3 KVKKRDNSLTEFEMDKIKTAIKKAFHGSKKRIHSSVLDLLAIRAVADFEDKMVDDVISVE 62 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 +IQ +VE+ L Y ++A+AYI YR + + RE ++ ++ + N Sbjct: 63 DIQDSVEHVLSECGYSEVAKAYILYRREHERIREIEEVNHRYLKDMERYLEG-------N 115 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLID 179 ++ + + A + K Y + + R + +A +RG++ ++ D Sbjct: 116 PENTIGGLILNHSAS-LTKLYWLEDIYDRSIREAVQRGELEIRGMEMMA----PYSCKWD 170 Query: 180 LKGMLTQGFKMGNAEIE--PPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 L +L +G ++ P K STA + + + + + +D +LAPFV Sbjct: 171 LSVLLEKGILSVQEKVGTLPAKHFSTACSHIMNFVGIIQNEWVSVQSFEHVDTLLAPFVR 230 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTF---- 293 + E + Q+L Y +N G+ PF F Sbjct: 231 KDQLNYA---------------------EIKQSIQTLVYGLNVPSRWGGRAPFSHFALDG 269 Query: 294 -------------------GFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKL-VFA 333 S E+R I+++ + G G+ K +P + ++ Sbjct: 270 DIPESFANKEVYIANKKENFVYGDLSEEARKIRQAFYEVLLEGDGEG-KPFAYPWISLYQ 328 Query: 334 IRDG 337 + DG Sbjct: 329 LEDG 332 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 79/455 (17%), Positives = 132/455 (29%), Gaps = 84/455 (18%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCA---TVAAVVSEQMQGRNQVDI 58 VMKRDG VPF ERI+ AI RA V D ++ I Sbjct: 3 VEKVMKRDGRIVPFDRERIRWAIKRAMLEVGVHDDKLLNRVVRRVVRRINELYDGQVPHI 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN- 117 IQ VE +LM ++A+AYI YR + RE++ ++ + L E LN Sbjct: 63 ENIQDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKKILNK-DRLDEIDKRFSLNALR 121 Query: 118 --------ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPF 169 N+ ++I + R+L + L V + H DL + Sbjct: 122 VLASRYLIRNEKGEIIESPRELFERVATLAVIPDLLYDERVYD---KNGKHEQDLSRVKY 178 Query: 170 FPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 + + ++ + + Sbjct: 179 YLE---------------------------HFEEFDGRYSIGRFKLNKY--------HFE 203 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTI---KECYDAFQSLEYEVNTLHTANG 286 ++ + + K + + + E A +E + + NT N Sbjct: 204 RLVNLYRELAEKGRMKVSIDEFLGMLENGAFDDYESEVEEYFRLMTGQVFMPNTPALINS 263 Query: 287 QTPFVTFG--FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD 344 P F + + I ++ + GLN K Sbjct: 264 GRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKSGGGT-------------GLNFSKLR 310 Query: 345 PNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS-----FLGVWENENGEQI 399 P D AS +++ ++ G R L VW + + I Sbjct: 311 PEGDFVGSTAGAAS-----GPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDIEKFI 365 Query: 400 HDGRNNLGVISL-NLPRIALEAKGDEATFWKLLDE 433 H N+G L N + G FW+ L + Sbjct: 366 HAKEKNIGTNVLSNFN----ISVGIWEDFWEALRD 396 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 56/461 (12%), Positives = 121/461 (26%), Gaps = 64/461 (13%) Query: 87 DRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAG---IVAKHYARQ 143 + + + + + + N +++ R+L V+ Sbjct: 168 KHEQDLSRVKYYLEHFEEFDGRYSIGRFKLNKYHFERLVNLYRELAEKGRMKVSIDEFLG 227 Query: 144 HLLPRDVVQAHERGDIHYHDLD---YSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKS 200 L + ++ + + P P L GML+ F + + Sbjct: 228 MLENGAFDDYESEVEEYFRLMTGQVFMPNTPALINSGRPL-GMLSACFVVPIED-----D 281 Query: 201 ISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYAN 260 + + + GG T ++ + TA + P + + Sbjct: 282 MESIMKAAHDVAMI---QKSGGGTGLNFSKL-----RPEGDFVGSTAGAASGPVSFMHLI 333 Query: 261 SRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESIL------RNR 314 + L + P + + + + Sbjct: 334 DAVSDVIKQGGVRRGANMGILEVWH---PDIEKFIHAKEKNIGTNVLSNFNISVGIWEDF 390 Query: 315 IAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKV 374 L ++ + R G K+ DP ++LA A + P ++ +D + + Sbjct: 391 WEALRDGKRYPL-----VNPRTGEKVKEIDPKSLFEELAF-MAWSKADPGVIFFDVINRR 444 Query: 375 TGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIA-LEAKGDEATFWKLLDE 433 G N GE+ + + S+NL + + +G W Sbjct: 445 NVLEPAKGG----PIRATNPCGEEPLYEYESCNLASINLAKFVKYDDEGKPYFDWDEYAY 500 Query: 434 RLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIG 493 + K L I E +L I +G +G Sbjct: 501 VIQKVAKYLDNAIDV--------NRFPLPEIDYNTKLTRR-------------IGVGMMG 539 Query: 494 IHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEE 534 + + + L G Y++E+ A E L ++ E Sbjct: 540 LADALFKL-GIP--YNSEEGFAFMRKATEYLTFYAYKYSVE 577 >UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YVI2_THEON Length = 910 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 91/459 (19%), Positives = 141/459 (30%), Gaps = 92/459 (20%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCA---TVAAVVSEQMQGRNQVDI 58 VMKRDG VPF ERIK AI RA V D ++ I Sbjct: 3 VEKVMKRDGRIVPFDKERIKWAIQRAMLEVGVRDEKLLNRVVRRVVKRVNELYDGQVPHI 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE-----------IRGLVE 107 IQ VE +LM +A+AYI YR + RE++ ++ + I L Sbjct: 63 ENIQDIVELELMRVGLFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSINALRV 122 Query: 108 QTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYS 167 + L+ N+ ++I + R+L + L V G+ H+ D S Sbjct: 123 LASRYLIR---NEKGEIIESPRELFERVATLVVIPDLLYDERVFD--REGN---HEQDLS 174 Query: 168 PFFPMFNCMLIDLKGMLTQG-FKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTIN 226 L + L+ G FK+ Sbjct: 175 NVEKYME-KLDEYDRKLSIGRFKLNK---------------------------------Y 200 Query: 227 RIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKEC---YDAFQSLEYEVNTLHT 283 + +L + + K + + I E A + E + S + NT Sbjct: 201 HFERLLNLYRELAQKGQMKVSIDEVIGMLENGAFDKYEDEIEEYFRLMTSQTFMPNTPAL 260 Query: 284 ANGQTPFVTFG--FGLGTSWESRLIQESILRN-RIAGLGKNRKTAVFPKLVFAIRDGLNH 340 N P F + + I ++ I +G GLN Sbjct: 261 INSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGG--------------TGLNF 306 Query: 341 KKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS-----FLGVWENEN 395 K P D+ AS +++ ++ G R L VW + Sbjct: 307 SKLRPEGDLVGTTTGAAS-----GPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDI 361 Query: 396 GEQIHDGRNNLGVISL-NLPRIALEAKGDEATFWKLLDE 433 + IH N+G L N + G + FW+ L E Sbjct: 362 EKFIHAKEKNIGTNVLANFN----ISVGIWSDFWEALRE 396 >UniRef50_C5VU72 Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Viruses RepID=C5VU72_9VIRU Length = 978 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 118/308 (38%), Gaps = 37/308 (12%) Query: 404 NNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYME 463 + V ++N+ RIALE GD F +L R+ ++ K L + + + LY Sbjct: 697 GSCKVNTINMVRIALECNGDFNKFKDILKHRVDISHKYLKVQRDVIAKNIKKNLLPLYSH 756 Query: 464 GACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGE----HVYDNEQLRAKGIA 519 G N ++ +G G+ E I L G E V+ ++ + Sbjct: 757 GLMD------------MNNQFST--IGINGMFEAIKILGGIETTSTGVHYTDRGLSMAKD 802 Query: 520 IVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHL 579 I+E + + +++ GY ++ P+E+ + C+ D FG + Y N + + Sbjct: 803 ILETIGEMNKVTRKQYGYNANIEQIPAESASVKLCKKDKILFG---DRVNTYIYGNQW-I 858 Query: 580 DVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDY-SYQHVPYYGTN 638 + + + +++ + GG + + + + + +Y + Q V Y+ Sbjct: 859 PLNVQADLTERVRVASVLDKACGGGVMLHINLGERFKDEEQSWRMMNYLAKQGVVYFSFI 918 Query: 639 TPIDEC-YECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQE 697 I+ C + F G+ CP C + ++ GYL + + + + + Sbjct: 919 MKINVCENDHSFYGDM--------CPICHKPVSDS---YVKIVGYLVKQSS--YKSERAK 965 Query: 698 EVKRRVKH 705 E+ R + Sbjct: 966 EMDERKFY 973 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 73/218 (33%), Gaps = 28/218 (12%) Query: 91 EREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPR-- 148 +++ L + + +++N+N K + + + K +R L Sbjct: 34 KKQLNTTLFFDKFMNSNNVANASIDDNSNVSDKNMTIMINESRKPLNKLLSRNKLYIEMK 93 Query: 149 ---------DVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFK-MGNAEIEPP 198 + ++ G ++ HD S P C LK ++ +G + + + +P Sbjct: 94 ENFGKQVADEWLELQINGALYEHDAHDSSLKPY--CYAYSLKNVVDKGLYFIKDMKAKPA 151 Query: 199 KSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGY 258 + + T + + IA + G I ++ ++ +K E + + Sbjct: 152 EHLDTYDSHVLEFIAYTTNLQSGAVGIPD-------YLIYAFYFWKKDIENGVVTKEQAN 204 Query: 259 ANSRTIKECYDAFQSLEYEVNTLHTANG-QTPFVTFGF 295 +Q + + +N + G Q+ + F Sbjct: 205 KYRE------QHWQKMLFSLNQPYLKGGEQSAYTNFSI 236 >UniRef50_A3DFS4 Putative uncharacterized protein n=22 Tax=Clostridium RepID=A3DFS4_CLOTH Length = 514 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 71/497 (14%), Positives = 140/497 (28%), Gaps = 91/497 (18%) Query: 159 IHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASH 218 I + ++P P + ++ D + +G + ++ PP + A V S Sbjct: 64 ICDLNEGHAPLRPRY--IIPDYAKFMKEGSRF--LQLAPPTDLYEALNSLLIFYKHVPSV 119 Query: 219 IYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEV 278 + ++D +L PF+ + K + + D+ Sbjct: 120 TNFPVYLGQLDTLLEPFMQDVDDTTAKKLLRGFL--------VHVDRTILDS-------- 163 Query: 279 NTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGL 338 F G + RL+ E A P L +G+ Sbjct: 164 -----------FSHANIGPKPTRTGRLLLEVEAELTQAV----------PNLTLKYEEGV 202 Query: 339 NHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQ 398 D A++ A + P N+ + G C Sbjct: 203 TDD------DFAIQAVKTALRSAKPSFANHRMFTQELGENYVIASCY-----------NG 245 Query: 399 IHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIAR-LEGVKARVA 457 + G + + L L IA A G E L + + + + +RI +E Sbjct: 246 LPLGGGSYTLCRLILGNIAKRAGGIEDFRTNQLPYVMDIMARYMDSRIRFEVEESGFFEN 305 Query: 458 PILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKG 517 L EG + R + G +G+ E +N L E Sbjct: 306 NFLAREGFISRK--------------RFTAMFGLVGLAECVNILLEKEGRPGRFGHDEYA 351 Query: 518 IAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSF 577 + E + + + ++ E+ + E F L A+ G+ Sbjct: 352 TELGESIIKQIYEFSEKHHNPY------CEITGGHF--LLHAQVGISEDQNISP----GT 399 Query: 578 HLDVEKKVN-PYDKIDFEAPYPPLANGGF--ICYGEYPNIQHNLKALEDVWDYSYQH-VP 633 + + ++ + D + + G I + Q N + + D+ S++ + Sbjct: 400 RIPIGEEPDEMIDHLMVVNHFHKYFPSGTGDIFPIDVTVHQ-NPEYVLDIVKGSFRKELR 458 Query: 634 YYGT-NTPIDECYECGF 649 Y D G+ Sbjct: 459 YLSFYEKNSDVIRITGY 475 >UniRef50_Q3ADQ8 Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ8_CARHZ Length = 511 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 81/569 (14%), Positives = 171/569 (30%), Gaps = 113/569 (19%) Query: 88 RDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLP 147 + + R + ++ T+ ++ ++ + + A+ Y Q +L Sbjct: 2 KLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGILC 61 Query: 148 RDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAV 207 ++P+ P + +L D + + +G + N ++PP+ + A Sbjct: 62 DLF-------------EGHAPYRPRY--ILPDYQKFMEKGSEYLN--LKPPQDLFEAVNA 104 Query: 208 TAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKEC 267 I V S + ++DE L PFV A+ + + + + + Sbjct: 105 LLIIYRYVPSITSYPVYLGQVDEHLEPFVLAAGEELSEKLLKMFLVQ--------IDRVL 156 Query: 268 YDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVF 327 D FV G + RLI + L + K AV Sbjct: 157 PDG-------------------FVHMNIGPKDTRTGRLILK---------LERELKQAV- 187 Query: 328 PKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSF 387 P + + A++ A + P +N ++ + C Sbjct: 188 PNISLKYNEETPDS-------FAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCY-- 238 Query: 388 LGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 + G + ++ LNL A +A+ + +L + ++ + + R Sbjct: 239 ---------NTLLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAK 289 Query: 448 RL-EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEH 506 + E K L EG + R + GY G++E I L G + Sbjct: 290 FIVEEAKFFETSFLAKEGLISL--------------ARFTSMAGYFGLYECIEHLTGLKL 335 Query: 507 VYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSE---NLCDRFCRLDTAEFGV 563 D E L +++ + +L S P R F Sbjct: 336 GKDKEALY-YAEQVLKTAKD-------------TLESVPGAYCYGTGGRIG------FHA 375 Query: 564 VPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGG-FICYGEYPNIQHNLKALE 622 G+ T + ++ + + +I E + G Y + N + + Sbjct: 376 QSGIDSDIDVTPGVRIKYGEEPDIFTQIKTEGRLHKYFDTGISDIYIFDRTARENPEGVL 435 Query: 623 DVWDYS-YQHVPYYGTNT-PIDECYECGF 649 + + + + + NT + G+ Sbjct: 436 KIIKGALKEGIRVFSFNTSDSEFIRITGY 464 >UniRef50_B9Y9Q5 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9Q5_9FIRM Length = 503 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 85/512 (16%), Positives = 149/512 (29%), Gaps = 97/512 (18%) Query: 147 PRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATA 206 + +Q G +P+ P + C D K ++ +G + PP+ + AT Sbjct: 37 SPEYLQGEREGIFCDLGEGLAPYRPRYIC--PDYKQLMEKGSPFLG--LTPPQDLLEATN 92 Query: 207 VTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKE 266 + V S + +DE+L PFV + K + + + Sbjct: 93 ALLIMYHHVPSITSFPVYLGNLDELLEPFVLKETPQRAKQILKMFLL--------HIDRT 144 Query: 267 CYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAV 326 D+ FV G S LI E L + + A+ Sbjct: 145 LTDS-------------------FVHADLGPQASRTGELILE---------LTEEMQCAM 176 Query: 327 FPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS 386 P L + + D + C K P N+ + G C + Sbjct: 177 -PNLTLK------YDSQQTSDDFLKRCALCMLKTAKPSFANHAMFTREWGENYAIASCYN 229 Query: 387 FLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRI 446 L V G + + L +L+AK + +L + + + + RI Sbjct: 230 GLKV-----------GGGGFTLPRIRLYECSLKAKDPQDFLDNVLPRYVQIMLEMMEDRI 278 Query: 447 ARLEGVKA-RVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGE 505 + A A L EG K + G +G+ E +N L G E Sbjct: 279 RFIVETSAFFKANFLVTEG--------------FVKLENFTGMFGMVGLAECVNHLLGIE 324 Query: 506 H----VYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEF 561 +N Q G+ I++RL V + + F A+ Sbjct: 325 DPRRGYGNNVQADDLGVKILQRLSDLVAGFTSAY----------CDGTDHHF--RLHAQV 372 Query: 562 GVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANG--GFICYGEYPNIQHNLK 619 G+ + + + V + +I A G I E + + Sbjct: 373 GIDSDGREN---SPGARIPVGAEPGMLKQIQHAARMHGFFPTGIGDIFKFEET-WLNTPE 428 Query: 620 ALEDVWDYSY-QHVPYYG-TNTPIDECYECGF 649 AL D+ + + Y+ D G+ Sbjct: 429 ALGDIIKGAMASGMRYFSGYLENNDVVRVTGY 460 >UniRef50_B0PG79 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PG79_9FIRM Length = 514 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 76/513 (14%), Positives = 149/513 (29%), Gaps = 98/513 (19%) Query: 146 LPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTAT 205 +P + + + + H+ ++P P + +L D + + +G + P++++ A Sbjct: 40 IPENFQRLADEEILCDHNDGHAPLCPRY--ILPDYERFMERGCDF--LRLPAPRTLAEAL 95 Query: 206 AVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIK 265 A V S + I R+D +L PFV A + + + Sbjct: 96 ASLTIFYTHVPSITHFPVYIGRLDRLLEPFVQAVGRAQAREPLRLFLIGLDRIIGDS--- 152 Query: 266 ECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTA 325 F G + LI E + + A Sbjct: 153 ------------------------FCHANIGPEQTVTGELIVELLPELQNAV-------- 180 Query: 326 VFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCR 385 P L L + D + CA + P G C Sbjct: 181 --PNLT------LLYDPAVTPDDFAIRCISCALRCANPAFAFDPYYRARIGEQYGIASCY 232 Query: 386 SFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTR 445 ++ G + + L +IA G + F+ L E + A + + + Sbjct: 233 -----------NGLYVGGGAFSLSRIRLGKIAERCTGPDDFFFNRLPESVDAACRFMEAK 281 Query: 446 IARL-EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALF-- 502 I + E + + L EG + G +G++E +N L Sbjct: 282 IRFIAEEIPFFKSNFLVREG--------------FLHRDKFVGLFGLVGMNECVNTLMDL 327 Query: 503 --GGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAE 560 +E+ G+ I+E + + V ++ RF L A+ Sbjct: 328 SGDTGRYGPDERANQLGLRIMESIEKQVQAFESRY----------CAVNGHRF--LLHAQ 375 Query: 561 FGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGF--ICYGEYPNIQHNL 618 G V T + + ++ YD + + G I N Sbjct: 376 VGAVGDNG----VTPGVRIAIGSELPLYDHLRQAGLFHHFFPSGVGDIFP-FDQTAVQNP 430 Query: 619 KALEDVWDYSYQ-HVPYY-GTNTPIDECYECGF 649 A+ D++ +++ + Y + D G+ Sbjct: 431 AAVLDIFKGAFRCGMQYISTYESASDVIRVTGY 463 >UniRef50_A1SHU8 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SHU8_NOCSJ Length = 515 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 78/525 (14%), Positives = 146/525 (27%), Gaps = 105/525 (20%) Query: 140 YARQHLLPRDVVQAHERG-------DIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGN 192 A L P +V A D++ + + P + +L D +L G Sbjct: 31 LAENSLEPPEVSAACAEALDKRIICDMYEGNAPHRPRY-----LLPDFALLLRNGSAF-- 83 Query: 193 AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNI 252 E+ P + A A +QV S + +D +L P+V + Sbjct: 84 LELGPATDLDEALATLLIGYSQVPSITGYPVWLGDLDALLEPYVEGVSEEELHRKLRLFW 143 Query: 253 PDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRL---IQES 309 + F G S R+ ++ Sbjct: 144 ISLDRMFPD---------------------------AFTHANLGPDDSRVGRMALRLERE 176 Query: 310 ILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYD 369 +L+ P L +++ D D + C P +N+ Sbjct: 177 LLQVV-------------PNL--SLKVDPERTPDDYVRDAVETVFAC----GKPHFVNHP 217 Query: 370 QVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFW- 428 +V G+ + C + L G + + LNL +AL +G+ +F Sbjct: 218 MMVGDLGAAYGVVSCYNSL-----------VAGGGSHTLTRLNLREVALRHEGERTSFLD 266 Query: 429 KLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASIS 488 +LL + L + + RI L +AR ++ + R + Sbjct: 267 ELLPRYVELTAELMEARIRHLVE-EARFFEHSWL------------VTDGLLHLDRYAAM 313 Query: 489 LGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSEN 548 G G+ E ++ + E V + ++ V + + E Sbjct: 314 FGVYGLAEAVSIVLEHEGVEARYGHDDVADELALQILTRVHELVAARPMPY------CEG 367 Query: 549 LCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICY 608 R + GVT + V + + + P L G I Sbjct: 368 NGGRAFLHSQSGIDSDLGVTA------GCRIPVGDEPDLLRHLRTITPNHALFPAG-ISD 420 Query: 609 G--EYPNIQHNLKALEDVWDYSYQ-HVPYYGTNTP-IDECYECGF 649 + N A+ DV +++ + N D G+ Sbjct: 421 VLAFDDTARRNPDAVVDVIRGAFRTGMRDVTFNLDSNDFIRITGY 465 >UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY Length = 762 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 96/565 (16%), Positives = 184/565 (32%), Gaps = 96/565 (16%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAA---EVDDADY---CATVAAVVSEQMQ--G 52 M V+KRD KV F +I+ A+ +A K+ V +A+ + ++++ G Sbjct: 1 MATVVIKRDDSKVDFDRTKIENAVFKAYKSVYDSNVKEAELRKRAENSTTDIVKEIEATG 60 Query: 53 RNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQ-------EIRGL 105 + ++ + EIQ VE LM + +A++YI YRH + R R L I L Sbjct: 61 KKEIRVEEIQDIVEKVLM-LKDQTVAKSYILYRHKKAEIRAFRASLGIPDDGLKLPINTL 119 Query: 106 VEQTNASLLN-------ENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGD 158 + + LL E+ + + K + L + A Sbjct: 120 IVLASRYLLKGPDGKIAESPKQLFTRVSHYIAAAEKKFGKSDDETNALEMEFYDA----- 174 Query: 159 IHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIE---PPKSISTATAVTAQIIAQV 215 + + P P ++ G K+G P + A + Sbjct: 175 --ITNFKFMPNSPT----------LMNAGTKLGQLSACFVLPVGDSIVEIFDAVKYAAII 222 Query: 216 ASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLE 275 H GG T + + + + T + P + ++ + Sbjct: 223 --HQSGGGTGFSFSRL-----RPTNDMVKSTGGVASGPVSFMKVFDIATEQVKQGGKRRG 275 Query: 276 YEVNTLHTANGQTPFVTFGFGLGTSWESRLIQ--ESILRNRIAGLGKNRKTAVFPKLVFA 333 + L + F R +I + L NR ++ Sbjct: 276 ANMGILRV--DHPSILDFIVAKENEGTLRNFNISVAITDEFMKALEANRD--------YS 325 Query: 334 IRDGLNHK-KGDPNYD-IKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVW 391 + + N K G N + L + A K P ++ D++ S+ P+ LG Sbjct: 326 LVNPRNGKVVGKLNARAVWNLIITMAWKTGDPGLVFLDRI---NSSYSNPV---PTLGPV 379 Query: 392 E--NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARL 449 E N GEQ ++ + S+N+ ++ + G W L + + L Sbjct: 380 ESTNPCGEQPLYPYDSCNLGSINMAKMLKKNDGQYDIDWDELKRITRMGVRFLD------ 433 Query: 450 EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYD 509 +++ P L +DV++ + I LG +G + + L YD Sbjct: 434 NVIESNTYP-----------LKEIEDVTKKIRR----IGLGIMGWADMLIKLGIR---YD 475 Query: 510 NEQLRAKGIAIVERLRQAVDQWKEE 534 + + ++ + + + EE Sbjct: 476 SNEALMLAEKVMSFITENARKMSEE 500 >UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=6 Tax=Clostridium difficile RepID=Q18BC3_CLOD6 Length = 729 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 97/565 (17%), Positives = 183/565 (32%), Gaps = 84/565 (14%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAA-KAAEVDDADYCATVAAVVSEQMQGRNQ-VDINE 60 +++KRDG K F +I++A+ +A+ + D + ++ ++ + + + E Sbjct: 2 KYIIKRDGTKELFSKSKIEDAVYKASINSEGGVDRELAYDISRKIANDYNSMEKCLSVEE 61 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREK---RGRLNQEIRGLVEQTNASLLNEN 117 IQ VE LM K +A+ YI YR R R K L + I + N +E Sbjct: 62 IQDIVEVLLMESNRKDIAKHYILYRERRSEIRTKAWEFDELQKSIWKNKYRHNGESFDEW 121 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 + S + ++K ++ L + N Sbjct: 122 IKRISNN--------SSRISKLIRQKRFL--------------------FAGRILAN--- 150 Query: 178 IDLKGMLTQGFKMGNA---EIEPPKS-----ISTATAVTAQIIAQVASHIYGGTTINRID 229 +G+ +G K+ + IEPPK TA + GG I+ Sbjct: 151 ---RGLQKEGKKVTYSNCYVIEPPKDSIEDIFDTAKKLARTF------SYGGGVGID--I 199 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTP 289 L P N + T + + + + +VN Sbjct: 200 SKLRPKGAKVNNAAKHTTGAVSFMELYSMTTGLIGQRGRRGALMISMDVNHPE------- 252 Query: 290 FVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPN-YD 348 + + T E +R + R+ ++ F + N YD Sbjct: 253 -IEDFIDIKTDLEKVTKANISVRVTDEFMQAVREKKLY-NCTFEVETTGEKIVKIVNAYD 310 Query: 349 IKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGV 408 + ++ P IL +D++ T +F + ++F N E+ + + Sbjct: 311 LFNKFVKNNWDYAEPGILFWDKI--KTYNFMSED--KNFCFSGVNPCAEEPLPSGGSCLL 366 Query: 409 ISLNLPRIALEAKGDEATF-WKLLDERLVLAR----KALMTRIARLEGVKARVAPILYME 463 S+NL ++ G+ ATF L + A L + + R + Y + Sbjct: 367 GSINLSEFIIQPFGEHATFDINKLKSCVREAVVALNDVLDEGLNLHPLQEQRDSVHKYRQ 426 Query: 464 GACGVRLNADDDVSEIFKNGRASI-----SLGYIGIHETIN--ALFGGEHVYDNEQLRA- 515 GV AD + + G +G ++E + AL E+ +E Sbjct: 427 IGLGVMGIADMLIKMGIRYGSDESLELCDLIGKTMLNEAVKQSALIAKEYGTFSEYKYEN 486 Query: 516 --KGIAIVERLRQAVDQWKEETGYG 538 K +E L + + ++ G Sbjct: 487 ISKSKFFIENLNEDTKEMVKKYGLR 511 >UniRef50_Q64EQ7 Oxygen-sensitive ribonucleoside-triphosphate reductase (Fragment) n=2 Tax=environmental samples RepID=Q64EQ7_9ARCH Length = 981 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 108/360 (30%), Gaps = 27/360 (7%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCAT-VAAVVSEQMQGRNQVDINE-IQ 62 +MK G K PF + I E + + KAA C + V + + + +D N + Sbjct: 620 IMKEYG-KSPFTPKNISELLNVSTKAAYEYVKRLCGRGLCKKVEKSTKYEHSIDYNYSLT 678 Query: 63 TAVENQLMSG-PYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKD 121 + + ++ I +E + +E + T+ Sbjct: 679 DKIFKKYEKVFKSLKILSKLINGDVAFCKIKEIKKVGREETYDIATDTSTQNFIAGDGFL 738 Query: 122 SKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLK 181 + + I + Y LLP + AH GD+H HDL+Y F C DL+ Sbjct: 739 FVHNTSHKKKADKICKEQYLL--LLPSKLADAHLSGDLHIHDLEY--FGTRGFCQDWDLR 794 Query: 182 GMLTQGFKMGN-----AEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV 236 G + P K A +I+ ++ GG +AP+ Sbjct: 795 YFFYYGLMPDGSGTKASVAGPAKKPEVAILHAVKILGSAQTNFAGGQGFFNFLTFIAPYF 854 Query: 237 TASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF------ 290 + + + + +R + + + Q + Sbjct: 855 EGLSYGEIEQLMQMFVYEMTQMQVARGGQLVFSSVQ---LNPGIPKIWKDKPVVYKGAIC 911 Query: 291 ----VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPN 346 E RL ++++ + G K FPK AI + + N Sbjct: 912 NGEQAPLRTYGDFEREVRLAFKALMNVMLQGD-YWGKPFNFPKPEVAIEPQFLKEDEEFN 970 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 28/175 (16%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVD-------DADYCATVAAVVSEQMQGRN 54 P V DG + + E I + +LR K +E D D +A ++++ Sbjct: 31 FPKVRTSDGHMLKWDREAIVKQLLRETKLSEEFYAGSSAMDEDTAREIAREAEKRIK--- 87 Query: 55 QVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRG--LVEQTNAS 112 + I+++ A+ ++++ + + + R+ + L++ Sbjct: 88 IMGISQLSGALVREIVNQILLE--------EYPEQEWKNICTRVGTPVYDAHLIDIGEGF 139 Query: 113 LLNENANKDSKVIPTQRDLLA------GIVAKHYARQHLLPRDVVQAHERGDIHY 161 ENAN D I K ++ R + A + G I+ Sbjct: 140 EAQENANLQDNAESLPGDEKILIKSGNEISVKQIGE--IVDRVLKNAGKEGKIYL 192 >UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Methanomicrobia RepID=A0B8R8_METTP Length = 688 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 87/540 (16%), Positives = 158/540 (29%), Gaps = 71/540 (13%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDA----DYCATVAAVVSEQMQGRNQV 56 + + KRDG V F RI AI +A A + D + V VV E+ + Sbjct: 12 LVERIRKRDGRIVDFDPSRISRAISKAFNALGIVDEKTPVELAGRVVDVVDERFRD-EIP 70 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLN------QEIRGLVEQTN 110 + ++Q VE L+ Y Q+A+AYI YR R RE + L + + Sbjct: 71 SVEDVQDIVEEVLIDAGYAQVAKAYILYRQRRSEIREAKHYLGVADDLKLSVNAIEVLKK 130 Query: 111 ASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFF 170 L + + V+ T ++ + + A + D A ++ L + P Sbjct: 131 RYLKRD---EFGNVVETPGEMFERVASAVSAVERRYEGDADDARKKFLSMMRSLSFLPNS 187 Query: 171 PMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDE 230 P + L L+ F + P + + +A + H GG T Sbjct: 188 PTLMNAGLPLGQ-LSACFVV------PVEDSIAGIFDALKYMALI--HQSGGGTGFSFSR 238 Query: 231 VLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPF 290 + + + + + V+ Sbjct: 239 LRPKGDVVRSTGGIASGPVSFMRIFDAATDVIKQGGRRRGANMGILRVDHPDITEFIA-- 296 Query: 291 VTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIK 350 G+ S I E +R + + D+ Sbjct: 297 CKDRGGMDNFNISVAITEEFMRQCERDGSVELINPRTGEATGEMS----------ARDLM 346 Query: 351 QLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVIS 410 + A +R P ++ D++ + N GEQ + + S Sbjct: 347 VMMATYAWRRGDPGVVFIDRI-NALHPVPGII-------EATNPCGEQPLLPFESCNLGS 398 Query: 411 LNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRL 470 +NL R+ W L+E + LA + L + A P+ +E A Sbjct: 399 VNLSRMVER----GEISWDRLEETVRLAVRFLDD------VIDANRFPLKQIEDATLRTR 448 Query: 471 NADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQ 530 I LG +G E + L Y ++ ++ + + + Sbjct: 449 K---------------IGLGVMGFAEMLIQL---GVSYASQDALRIAEELMAFITKTARE 490 >UniRef50_UPI0001B41CA5 anaerobic ribonucleoside triphosphate reductase n=3 Tax=Listeria monocytogenes RepID=UPI0001B41CA5 Length = 180 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 77/173 (44%), Positives = 111/173 (64%), Gaps = 1/173 (0%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V+KRDG K F +I+ A+ + KA ++D + + V ++ + + I+EIQ Sbjct: 9 QMVIKRDGRKASFDLIKIRNAVEASMKAINLEDETFLEEILLEVVSELPNKADMTIDEIQ 68 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 VEN LM Y +ARAYIEYRHDRD ERE +++ + L++ + +++NENANKD+ Sbjct: 69 HCVENTLMKSTYPDVARAYIEYRHDRDHERENITDMHKSVEKLLQ-KDKTVVNENANKDA 127 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNC 175 V TQRDL AG VAK YA +++LP+ V AH +G+IH+HDLDYSP+ M NC Sbjct: 128 TVFNTQRDLTAGAVAKSYALKYMLPKHVSNAHLKGEIHFHDLDYSPYHAMTNC 180 >UniRef50_B9PEY4 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9PEY4_POPTR Length = 264 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 9/154 (5%) Query: 516 KGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVV--PGVTDKGYY 573 + +++ +R + +++E TG+ ++L +TP+E RF R D + + G D+ YY Sbjct: 1 MAMRLLDHVRGRIVEFQEATGHMYNLEATPAEGTTYRFAREDRKRWPDILQAGTADQPYY 60 Query: 574 TNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQ--H 631 TNS L V +P++ + + GG + + + +A + + + + Sbjct: 61 TNSSQLPVGFTDDPFEALARQESLQSKYTGGTVLHLYMGERLSSGEACKRMVRRALESFR 120 Query: 632 VPYYGTNTPIDECYECGFTGEFECTSKGFTCPKC 665 +PY C + G+ + CPKC Sbjct: 121 LPYITITPTFSVCPKHGY-----LAGEHRFCPKC 149 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 102/340 (30%), Gaps = 61/340 (17%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVS---EQMQGRNQVDI 58 VMKRDG VPF RI+ A+ RA V D V + ++ I Sbjct: 3 VEKVMKRDGRIVPFDESRIRWAVQRAMWEVGVRDERKLDEVVKNIVKRINELYDGKIPHI 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE-----------IRGLVE 107 IQ VE +LM ++A+AYI YR + RE++ R+ + I L Sbjct: 63 ENIQDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKRILNKKELDEIDKRFSINALRV 122 Query: 108 QTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYS 167 + L + ++ +I + R+L + L V + DL Sbjct: 123 LASRYLKRD---ENGNIIESPRELFERVSILAVIPDLLYDERVFDKDGN---YKQDLKRV 176 Query: 168 PFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINR 227 ++ + + ++ + Sbjct: 177 EYYLE---------------------------NFEKFDGKYSIGKYKLNKY--------H 201 Query: 228 IDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKEC---YDAFQSLEYEVNTLHTA 284 + ++ + + K + + + E + KE + + + NT Sbjct: 202 FERMVNLYRELAEKGKMKVSIDEFLSMLERGEFDKYEKEIEEYFKLMTNQVFMPNTPALI 261 Query: 285 NGQTPFVTFG--FGLGTSWESRLIQESILRN-RIAGLGKN 321 N P F + + I ++ I +G Sbjct: 262 NSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGG 301 >UniRef50_C5EWH7 Putative uncharacterized protein n=2 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWH7_9FIRM Length = 499 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 92/550 (16%), Positives = 171/550 (31%), Gaps = 105/550 (19%) Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL 180 + KV QR +A++ + E G + +P+ + L D Sbjct: 16 NPKVTFNQRLKDMAKIAENSIELVNYTELSRKYFENGAMMDMFEGKTPYRTRY--CLPDY 73 Query: 181 KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY 240 + L QG + +EPPK I A + + + I +D +L PFV Sbjct: 74 ERFLKQGSEF--LMLEPPKDIWDAVGNLLCLYHNIPADGGLAVYIGCLDRLLEPFVK--- 128 Query: 241 NKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS 300 +E A + + + +A F G + Sbjct: 129 -------DEDEARKAIRFLLTHVDRTISNA-------------------FCHADLGPEDT 162 Query: 301 WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR 360 R+I E L K + P + R+ D + ALE A Sbjct: 163 RAGRIILE---------LTKEMQRP-CPNMTLMYREDTPD-------DYMKAALETAMVS 205 Query: 361 MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA 420 P N D + + + C + G L ++ LN+ ++ A Sbjct: 206 SKPSFAN-DALYRRDMGDYAVVSCY-----------NTLPIGGCGLTLVRLNMDQLPRLA 253 Query: 421 KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAP-ILYMEGACGVRLNADDDVSEI 479 E +++ E + A+ +R + LY EG + + D V Sbjct: 254 TDPEDLLNRVIPEAVTAVCDAIDSRCEFIVDYCHYYENTFLYREGLI--KKDRDHMVG-- 309 Query: 480 FKNGRASISLGYIGIHETINALFG----GEHVYDNEQLRAKGIAIVERLRQAVDQWKEET 535 G++G+ E +N + G E E+ A G AI+ER+RQ +D+ + Sbjct: 310 --------MFGFVGLAECVNGILGLTDEKERFGHGEKADALGEAIMERIRQEIDRRPAKY 361 Query: 536 GYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEA 595 G + L++ GV + T + + ++ D+I Sbjct: 362 G-KYGLHAQV--------------------GVMEDTVSTPGGRIPIGEEPELPDQIMNFI 400 Query: 596 PYPPLANGGF--ICYGEYPNIQHNLKALEDVWDYSYQ-HVPYYGT-NTPIDECYECGFTG 651 + G + +++N + L D+ +++ Y + D G+ Sbjct: 401 RMHKGCDAGCGELFP-FDDTVKNNPQYLLDILKGAFRSGARYLSFYSGDSDLVRVTGYLV 459 Query: 652 EFECTSKGFT 661 + K Sbjct: 460 KKSDIEKFDR 469 >UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=Thermococcaceae RepID=Q5JJ43_PYRKO Length = 1746 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 60/348 (17%), Positives = 101/348 (29%), Gaps = 56/348 (16%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCA---TVAAVVSEQMQGRNQVDI 58 VMKRDG VPF ERI+ AI RA V D ++ +I Sbjct: 3 VEKVMKRDGRIVPFDKERIRWAIQRAMLEVGVRDEKLLNRVVRRVVRRVNELYDGQIPNI 62 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENA 118 IQ VE +LM +A+AYI YR + RE++ ++ + L E LN Sbjct: 63 ENIQDIVELELMRAGLFDVAKAYILYRKKKAEIREEKKKILNK-DKLDEIDKRFSLNALR 121 Query: 119 ---------NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPF 169 N+ ++I + R+L + L V + G H+ D S Sbjct: 122 VLASRYLIKNEKGEIIESPRELFERVAILAVIPDILYDERVFD--KNGG---HEQDVSAI 176 Query: 170 FPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 ++ + ++ + Sbjct: 177 ERYRE-------------------------NLDEYDGKFSIGRFRLNKW--------HFE 203 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKEC---YDAFQSLEYEVNTLHTANG 286 +L + + K + + E A E + + NT N Sbjct: 204 RLLNLYRELAEKGQMKLPIDEVLKMLENGAFDNYEDEIEEYFRLMTGQYFMPNTPALINS 263 Query: 287 QTPFVTFG--FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVF 332 P F + + I ++ + K++F Sbjct: 264 GRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKAGGGCIDGNAKIIF 311 Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 37/110 (33%), Gaps = 15/110 (13%) Query: 330 LVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS--- 386 +VF GLN K P D+ AS +++ ++ G R Sbjct: 750 MVFVHNTGLNFSKLRPEGDLVGTTTGAAS-----GPVSFMHLIDAVSDVIKQGGVRRGAN 804 Query: 387 --FLGVWENENGEQIHDGRNNLGVISL-NLPRIALEAKGDEATFWKLLDE 433 L VW + + IH N G L N + G FW+ L E Sbjct: 805 MGILEVWHPDIEKFIHAKEKNTGTNVLSNFN----ISVGLWEDFWEALKE 850 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 71/458 (15%), Positives = 133/458 (29%), Gaps = 95/458 (20%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVV----SEQMQGRNQV 56 M + KRDG VPF E+I AI +A +A D ++ V ++ Sbjct: 1 MIKKIRKRDGRIVPFNPEKITNAIWKAMQAVGEKDFSTAEKISKEVVRELERTLKPGEIP 60 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNE 116 D+ +IQ VE +L+ ++A+AYI YR R R+++ ++ + + + E +N Sbjct: 61 DVEQIQDIVERKLIEAGLARVAKAYILYRQKRAEIRKEKQQILNK-KEIDEVDKRFDINA 119 Query: 117 ---------NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDV--VQAHERGDIHYHDLD 165 N ++ K+I + + L + L V + ++ + D + Sbjct: 120 LRVLAARYLNKDRAGKIIESPKQLFQRVAVNTALPSLLYDERVYSKKELKKQPVEDFDPE 179 Query: 166 YSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTI 225 +G L G N Sbjct: 180 R-------------YEGKLKIGDYTLNR-------------------------------- 194 Query: 226 NRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLE---YEVNTLH 282 ++ + + + + K + E +E + + + NT Sbjct: 195 YHLEGLKRVYDRLNNERRMKIPFSKLLKMIEKGDFESYGREIDQYYSIMVEKKFMPNTPV 254 Query: 283 TANGQTPFVTFG--FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNH 340 N P F L I E++ R + G N Sbjct: 255 LVNFGNPLGMGMACFVLDMEDSIESIMETLKRAALIFKAGGGC-------------GYNF 301 Query: 341 KKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS-----FLGVWENEN 395 K P D +S + + + G R L + Sbjct: 302 SKLRPKGDFISTTHGKSS-----GPIAFMTLYDKMTDVIKQGGVRRGANMGILNSDHPDI 356 Query: 396 GEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDE 433 E I + N+ + + N+ + + FW E Sbjct: 357 EEFIVAKKGNVQLTNFNI------SVFLKEDFWDYYRE 388 >UniRef50_D1AIQ0 Putative uncharacterized protein n=4 Tax=Bacteria RepID=D1AIQ0_SEBTE Length = 495 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 79/541 (14%), Positives = 157/541 (29%), Gaps = 104/541 (19%) Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 NK +L A ++ + + G I +PF P + ++ Sbjct: 9 NKTLTYEQIVMNL-AKEGENSLNVLNI-SEKAQKYRDEGIICDLFEGNAPFRPRY--IVP 64 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 D + + G K IEP K I AT + V S + +D +L P++ Sbjct: 65 DYEKFMKNGSKFLG--IEPAKDIWEATHNLLMLYKHVPSITTMPVYLGNLDYMLEPYIK- 121 Query: 239 SYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLG 298 +E A D+ F G Sbjct: 122 ---------DEEEAYRAIKLFLKHIDTTITDS-------------------FCHSNIGPK 153 Query: 299 TSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECAS 358 + + +I LR + P L + + D A + Sbjct: 154 ETKAAFII----LRVMEE-----LQLPT-PNLTLKYSE----ETSDKLALAAVEAALVTA 199 Query: 359 KRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIAL 418 K P N+ + + C + L V G ++ + L ++ Sbjct: 200 K---PSFANHKVYSENFKGDYGIVSCYNGLKV-----------GGGAYTLVRVKLGELSK 245 Query: 419 EAKGDEATFWKLLDERLVLARKALMTRIARL-EGVKARVAPILYMEGACGVRLNADDDVS 477 +A E ++L + + R+ + E + L EG Sbjct: 246 KADSVEQFMDEVLPDLADAMLGYIDERVRFIVEETPFFESNFLAKEG------------- 292 Query: 478 EIFKNGRASISLGYIGIHETINALF----GGEHVYDNEQLRAKGIAIVERLRQAVDQWKE 533 + + + + G +G+ E +N L E +++ G+ IV++L + V K Sbjct: 293 -LIERDKFTGLFGVVGLAECVNNLLKAENQEERFGYSDKANQLGMQIVQKLDEKVKGHKN 351 Query: 534 ETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDF 593 + L A+ G+ +D + V ++ +D + Sbjct: 352 KY----------CPFTDGNH--LLHAQVGIDTDTSDSP----GCRIPVGEEPEIWDHLTQ 395 Query: 594 EAPYPPLANG--GFICYGEYPNIQHNLKALEDVWDYSY--QHVPYYG-TNTPIDECYECG 648 AP+ G I + N +A+ D+ ++ + + ++ D G Sbjct: 396 SAPFHKYFPSGIGDIF-TFDDTYKKNPQAILDIIRGAFNSTDLRFISVYSSDSDVVRVTG 454 Query: 649 F 649 + Sbjct: 455 Y 455 >UniRef50_C2WAD7 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Bacillus cereus Rock3-44 RepID=C2WAD7_BACCE Length = 170 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 1/160 (0%) Query: 89 DIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPR 148 + + L + +V L+ ENAN D + A AK+YA + LL Sbjct: 9 MKQSVREEALMKMFETIVHGNEQDLMQENANVDGRSPMGMMGTFASESAKYYAIEQLLSE 68 Query: 149 DVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVT 208 V +A + ++ HDLD+ C I L ML +GF G+ + P+ I +A A++ Sbjct: 69 QVKKAISQNILYPHDLDFYATG-TTTCSQIPLAQMLEKGFHTGHGHMRQPQDIKSALALS 127 Query: 209 AQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAE 248 + I + +GG + D LAP+V ++ +++K E Sbjct: 128 SIIFQANQNMQHGGQSFALFDMDLAPYVRKTFERNKKKLE 167 >UniRef50_P37342 Uncharacterized protein yjjI n=153 Tax=Proteobacteria RepID=YJJI_ECOLI Length = 516 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 79/511 (15%), Positives = 153/511 (29%), Gaps = 95/511 (18%) Query: 146 LPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTAT 205 LP + +A + G I ++P+ P + +L D L G + E+E K + A Sbjct: 44 LPAEARRALDEGVICDMFEGHAPYKPRY--VLPDYARFLANGSEW--LELEGAKDLDDAL 99 Query: 206 AVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIK 265 ++ + V S + ++D +L P+V + + Sbjct: 100 SLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDVRIKRF--------WRYLDR 151 Query: 266 ECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTA 325 DA F+ G S +R I + + ++ + Sbjct: 152 TLPDA-------------------FMHANIGPSDSPITRAILRA--------DAELKQVS 184 Query: 326 VFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILN---YDQVVKVTGSFKTPM 382 P L F D ++ + EC+ P I N +D++ G + Sbjct: 185 --PNLTFIY--DPEITPDDLLLEVAKNICECS----KPHIANGPVHDKIFTKGG--YGIV 234 Query: 383 GCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKAL 442 C + L G + ++ LNL IA ++ + F + L + Sbjct: 235 SCYNSL----------PLAGGGS-TLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAII 283 Query: 443 MTRIARL-EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINAL 501 R L + L EG + R G G+ E +N L Sbjct: 284 DARCEFLYQQSHFFENSFLVKEG--------------LINPERFVPMFGMYGLAEAVNLL 329 Query: 502 FGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEF 561 E + A + R+ + ++ + +TP ++ A Sbjct: 330 CEKEGIAARYGKEAAANEVGYRISAQLAEF---------VANTP-----VKYGWQKRAML 375 Query: 562 GVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQH-NLKA 620 G++ T L + +P + AP+ G N +A Sbjct: 376 HAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQA 435 Query: 621 LEDVWDYSYQ-HVPYYGTN-TPIDECYECGF 649 L + +++ + + N + D G+ Sbjct: 436 LVQLCLGAFKAGMREFTANVSGNDLVRVTGY 466 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 74/454 (16%), Positives = 134/454 (29%), Gaps = 78/454 (17%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAA----VVSEQMQGRNQVD 57 V+KRDG V F S RI+ AI A + D V V+ Sbjct: 3 VTKVVKRDGRVVEFDSFRIRRAIEMAMREVGKFDEAILDKVVKYVLDVIDSTFSDERPPH 62 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRL--NQEIRGLVEQTNASLLN 115 + EIQ VE LM ++A+AYI YR +R+ R+++ + + + ++ + + + Sbjct: 63 VEEIQDIVELALMKYDLFEVAKAYIVYRKEREKIRKEKMAILGKDYVDDVDKRLSLNAVR 122 Query: 116 ENA------NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPF 169 A D + + + L I + L + ++H Sbjct: 123 LLASRYLQKGPDGRFLEDPKGLFIRIASLVVIPDILYDPLIFDKEGEQEVH--------- 173 Query: 170 FPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRID 229 P + G + G + PP + + ++ Sbjct: 174 -PTEYFNPEEWAGKVGLGGGDPENHLAPP------------FVWNA----------HHLE 210 Query: 230 EVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIK---ECYDAFQSLEYEVNTLHTANG 286 + A + + + + K E Y L++ N+ N Sbjct: 211 RMKALYDELNSQGKMRVSWSQFFDMLRDGRFDHHYKDFLEYYRLMVDLKFIPNSPTLFNA 270 Query: 287 QTPFVTFG--FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD 344 T F L I S + G+N+ K Sbjct: 271 GTMLGQLSACFVLPIEDSLESIMRSATEAAMIFKSGGGV-------------GINYSKLR 317 Query: 345 PNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS-----FLGVWENENGEQI 399 P DI + AS +++ +++ V G R L +W + + I Sbjct: 318 PQGDIVRSTGGQAS-----GPVSFMRIIDVITDVVKQGGRRRGANMGILEIWHPDIMKFI 372 Query: 400 HDGRNNLGVISLNLPRIALEAKGDEATFWKLLDE 433 + + NL + FWK +E Sbjct: 373 EAKAKPGNLENFNL------SVMITEDFWKYYEE 400 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 70/491 (14%), Positives = 130/491 (26%), Gaps = 77/491 (15%) Query: 61 IQTAVENQLM--SGPYKQL-ARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 I + + L+ +++ Y G + L Sbjct: 154 IPDILYDPLIFDKEGEQEVHPTEYFNPEEWAGKVGLGGGDPENHLAPPFVWNAHHLERMK 213 Query: 118 ANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCML 177 A D + + R E + DL + P P Sbjct: 214 ALYDELNSQGKMRVSWSQFF-DMLRDGRFDHHYKDFLEYYRLMV-DLKFIPNSPTLFNAG 271 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 L L+ F + + + +AT + GG IN + Sbjct: 272 TMLGQ-LSACFVLPIEDSLESI-MRSATEAAMIFKS------GGGVGINY------SKLR 317 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF-- 295 + R T + + P + + + L + P + Sbjct: 318 PQGDIVRSTGGQASGPVSFMRIIDVITDVVKQGGRRRGANMGILEIWH---PDIMKFIEA 374 Query: 296 -----GLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIK 350 L S +I E + G + R+G DP + Sbjct: 375 KAKPGNLENFNLSVMITEDFWKYYEEGKDY---------PLINPRNGEVWGSIDPR-EAF 424 Query: 351 QLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE--NENGEQIHDGRNNLGV 408 + E A + P +L D + + R LG + N GE+ + + Sbjct: 425 RKIAEMAWRTGDPGVLFADNINRRNI-------LREHLGEIKSTNPCGEEPLYPYESCNL 477 Query: 409 ISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGV 468 S+NL G W + A + L + PI Sbjct: 478 GSMNLYAYIRRENGLVTFDWDEYSRDIRKALRFLD------NIIDVNKFPIP-------- 523 Query: 469 RLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVER----- 523 ++ + K R + LG +G+ +T+ AL Y++E+ E Sbjct: 524 ------EIEKTTKRTRK-VGLGLMGLADTLFAL---RIPYNSEEGFNFMRRAAEYLTYFA 573 Query: 524 LRQAVDQWKEE 534 + ++V++ KE Sbjct: 574 MLESVERAKER 584 >UniRef50_UPI0001C361F0 hypothetical protein ChatD1_32948 n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C361F0 Length = 516 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 88/499 (17%), Positives = 153/499 (30%), Gaps = 96/499 (19%) Query: 146 LPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTAT 205 +P E G ++ ++P+ P + ++ D K + QG K IEPPK++ Sbjct: 53 IPPKTRAYFETGALNDLFEGHAPYRPRY--IMPDYKKFVRQGSKF--LRIEPPKTLDELL 108 Query: 206 AVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIK 265 + V S + +D ++ PF T + K + + Sbjct: 109 TGLEILYHHVPSITGFPVYLGELDTMIEPFTTGLADDEVKEKIRLFLIYL--------DR 160 Query: 266 ECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTA 325 D+ F G + R+I E L K + A Sbjct: 161 TITDS-------------------FCHGNLGAKPTRTGRIILE---------LEKELQNA 192 Query: 326 VFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCR 385 V P L + + +LA+ + P I N C Sbjct: 193 V-PNLTLK------YDPDVTPDEYAELAVSTSLYCANPAICNDADNRTTYPCEYGISSCY 245 Query: 386 SFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTR 445 + L G + + L + AK E +LL + L + R Sbjct: 246 NIL-----------PVGGGAYTLSRITLTELVKSAKSTEHFLKELLPDCLNAVGNYMNER 294 Query: 446 IARL-EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFG- 503 + L E + L EG + + + G G+ E +NAL Sbjct: 295 VKFLVERSGFFESSFLVREG--------------LIEREKFVGMFGVTGLAECVNALMAD 340 Query: 504 -GEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFG 562 G+ + + G+ I+E +++ V + + R L A+ G Sbjct: 341 TGKRYGHSAESDDLGVQIMEIIQKFVADFPAVY------------SEIGRGHYLLHAQVG 388 Query: 563 VVPGVTDKGYYTNSFHLDVEKKV-NPYDKIDFEAPYPPLANGGF--ICYGEYPNIQHNLK 619 + +DKG T+ + V + N D + A + G I ++N Sbjct: 389 L---DSDKGI-TSGVRIPVGDEPENLLDHLRHSARFHEYFPTGVGDIFPFAVT-ARNNPG 443 Query: 620 ALEDVWDYSYQ-HVPYYGT 637 AL D+ S+Q V Y Sbjct: 444 ALVDIVKGSFQLGVKYMSF 462 >UniRef50_P44744 Uncharacterized protein HI0521 n=23 Tax=Bacteria RepID=Y521_HAEIN Length = 514 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 79/529 (14%), Positives = 146/529 (27%), Gaps = 105/529 (19%) Query: 146 LPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTAT 205 + + I Y+ + P + +L D + +G + E+ PPK + A Sbjct: 42 YTDEEWGFLQNQMICDLCEGYAIYRPRY--ILPDYNVYIQKGCEF--LELPPPKDLDEAL 97 Query: 206 AVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIK 265 + + V S I R+D +L PF+T + K + K Sbjct: 98 DGLLILYSHVPSITTYPVYIGRLDVLLEPFITDEEKDYIKI----------KRFLNHIDK 147 Query: 266 ECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTA 325 D+ F G + RLI +++ A Sbjct: 148 TVPDS-------------------FCHANIGPYDTKAGRLILRAVIDL----------EA 178 Query: 326 VFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCR 385 P + + K + + +LA + P N + G C Sbjct: 179 PTPNMTIR------YDKSKTSREFAELAAKACLLVSKPSFANDAYYISDLGEEYGVASCY 232 Query: 386 SFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTR 445 + L E G + L L IA K + +LL A + R Sbjct: 233 NAL----PECG-------GAYTLTRLRLGTIARTCKSADEMLNELLPRVAKCALSTMDKR 281 Query: 446 IAR-LEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGG 504 +E + L EG K + +G+ + N L Sbjct: 282 HKFVVEESNFFNSSFLEKEG--------------FIKRTNFTGMFAIVGLADATNHLLQC 327 Query: 505 EHVYDNEQ----LRAKGIAIVERLRQAVDQ----WKEETGYGFSLYSTPSENLCDRFCRL 556 E + + AI+++L++ D + E TG + L++ + Sbjct: 328 EGLNETFGKSVRGDEIATAIMDKLKEITDAHEGVYAERTGNRYLLHAQVGASN----HEE 383 Query: 557 DTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGF-ICYGEYPNIQ 615 D + V ++ + AP+ G + Sbjct: 384 DKRNAPA-------------HRIRVGEEPTLLAHLKQSAPFHKYFPSGTGDLFAFDQTYV 430 Query: 616 HNLKALEDVWDYSYQHVPYYGTNT---PIDECYECGFTGEFECTSKGFT 661 + A+ D+ D ++ + Y T D G+ + K Sbjct: 431 DHCDAVVDIIDGAFS-LGYRYITTYLKNTDLIRVTGYLVKKSEVEKYRK 478 >UniRef50_A5M517 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Streptococcus RepID=A5M517_STRPN Length = 185 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 61/163 (37%), Positives = 84/163 (51%), Gaps = 11/163 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAA-------EVDDADYCATVAAVVSEQMQGRN 54 T V KRDG +V F ++I +A+ +AA E D + + + Sbjct: 13 TLFVEKRDGRRVVFDVDKIDKALHKAADKVIDVTPLVEKRLNDLTERIITEIHSRFPQG- 71 Query: 55 QVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLL 114 + I EIQ VE++L+ LA YI YR RD ER K +N I L+ + +++ Sbjct: 72 -IKIYEIQNIVEHELLEAKEYALAEEYITYRTQRDFERSKATDINFSIHKLLN-KDQTVV 129 Query: 115 NENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERG 157 NENANKDS V TQRDL AGIV K Q +LP+ V AH++G Sbjct: 130 NENANKDSDVFNTQRDLTAGIVGKSIGLQ-MLPKHVANAHQKG 171 >UniRef50_C8W8Y4 Putative uncharacterized protein n=3 Tax=Bacteria RepID=C8W8Y4_ATOPD Length = 500 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 73/490 (14%), Positives = 134/490 (27%), Gaps = 99/490 (20%) Query: 148 RDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAV 207 + +AH D+ +P+ P + C D + G + + P+++ Sbjct: 40 DRLFKAHAIDDMC---EGNAPYRPRYIC--PDYQVFAQNGSEF--LRFDKPENLDDLLWG 92 Query: 208 TAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKEC 267 A + V S + ++D+++ PF+ + K Sbjct: 93 LATLYDNVPSVTSRPVYVGQLDKIIDPFLEGMTDDEIKPRLRRF---------------- 136 Query: 268 YDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVF 327 +N + + + G + RL+ E A Sbjct: 137 ----------LNHIDRTVA-SGYCHANIGPEDTRAGRLLLEVERELMNAV---------- 175 Query: 328 PKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSF 387 P + + + +LA++ P N+ + T + C + Sbjct: 176 PNFTLK------YDPEITSDEFMRLAVKTTMVCSNPAFANHRIHKETYPGEYTVVSCYNV 229 Query: 388 LGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 L G + + LP +A A + LL + R+ Sbjct: 230 L-----------PMGGGAYTLSRVLLPGLAKLATNVDDFMNNLLPTATSEVLNFMNERVR 278 Query: 448 RL-EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEH 506 + E L EG R G G+ E + L + Sbjct: 279 FIVEDSNFFETSFLAKEGLISR--------------DRFCGMFGVAGMSECVAELLHLDS 324 Query: 507 ---VYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGV 563 +++ I+ ++ V+ + SE RF A F Sbjct: 325 SRTYGKDDEANELADQIMVKIADQVNSFDAVY----------SEVFGGRFTLHAQAGFSD 374 Query: 564 VPGVTDKGYYTNSFHLDVEKKV-NPYDKIDFEAPYPPLANGGF--ICYGEYPNIQHNLKA 620 GV T + V + N YD I A N G I E P + N A Sbjct: 375 QKGV------TPGVRIKVGDEPANLYDHIRHSARMHRFFNSGVSDIFPAE-PTAERNPDA 427 Query: 621 LEDVWDYSYQ 630 + DV ++ Sbjct: 428 VIDVVKAAFS 437 >UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alkaliphilus RepID=A8MLU7_ALKOO Length = 784 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 4/147 (2%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAE-VDDADYCATVAAVVSEQMQGR-NQVDINE 60 VMKR+G V F +I AI +A + D + + + E++Q + + E Sbjct: 2 IQVMKRNGRLVEFNPSKITNAIKKAMAETKLGVDHNLSVKITEEIKEKIQNNAKPIHVEE 61 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE--IRGLVEQTNASLLNENA 118 IQ VE LMS K +A+ YI YR++R R + +++ + Q + N Sbjct: 62 IQDIVEMLLMSSDRKDVAKRYIIYRNERAKIRANQKSSDEKLLTDEFISQYKHQIPPLNQ 121 Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHL 145 + T L + Y + + Sbjct: 122 LGNFVYYRTYSRWLQEEGRREYWWETV 148 >UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=cellular organisms RepID=A9A645_NITMS Length = 884 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 66/465 (14%), Positives = 123/465 (26%), Gaps = 109/465 (23%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR-----NQV 56 + KR G F ++I AI +A A D +A V ++ + Sbjct: 10 INEIRKRSGAVTAFNKDKISNAIYKALAATSKADRGLADQLADNVVNKLVEQGFTSTRSP 69 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRL-----------NQEIRGL 105 + +IQ VE+ L+ +A+AYI YRH+R R+++ ++ ++ L Sbjct: 70 TVEDIQDIVESTLIDSGNSDIAKAYIVYRHERRKLRDEKMKVLNLKALDPVSKKFDLNCL 129 Query: 106 VEQTNASLLNENANK--DSKVIPTQRDLLAGIVAKHYARQHLLPRDV--VQAHERGDIHY 161 + L N+ +S +R + + + + Q E + Sbjct: 130 RVLASRYLFRNGKNEIIESPTQMFERVAILVGIGDLMYDAQVFDKSGNTKQDVEEAKSYL 189 Query: 162 HDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYG 221 LD + G N + Sbjct: 190 EKLDAFDYK-------------FKVGDYFFNKW-----HFRSLINH-------------- 217 Query: 222 GTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKEC---YDAFQSLEYEV 278 +VT + H K + + + + +D S ++ Sbjct: 218 -------------YVTLANKGHMKISFKELLTLLAAKKLDGYADKITEYFDLMVSQDFLP 264 Query: 279 NTLHTANGQTPFVTFG--FGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRD 336 N+ N F LG I +S + Sbjct: 265 NSPTMMNAGGRLGQLSACFVLGMQDGMEEIMKSTSDAALIFKSGGGV------------- 311 Query: 337 GLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRS-----FLGVW 391 G+N+ DI AS +++ ++ G R + W Sbjct: 312 GINYSDLREEGDIVASTSGVAS-----GPVSFMNIINTVTEVVKQGGKRRGANMGIIEAW 366 Query: 392 ENENGEQIHDGR-----NNLGVISLNLPRIALEAKGDEATFWKLL 431 + + I + N V + G FW L Sbjct: 367 HPDVEKFITNKTEPGVLENFNV-----------SVGVWEDFWHAL 400 Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 81/289 (28%), Gaps = 41/289 (14%) Query: 165 DYSPFFPMFNCMLIDLKGM---LTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYG 221 D+ P P L + G + G EI + + + + G Sbjct: 261 DFLPNSPTMMNAGGRLGQLSACFVLGMQDGMEEI-----MKSTSDAALIFKS------GG 309 Query: 222 GTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTL 281 G IN D + + T+ + P + + + + + + Sbjct: 310 GVGINYSD------LREEGDIVASTSGVASGPVSFMNIINTVTEVVKQGGKRRGANMGII 363 Query: 282 HTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRK-TAVFPKLV---FAIRDG 337 + P V T +L N +G + +R Sbjct: 364 EAWH---PDVEKFITNKTEP-------GVLENFNVSVGVWEDFWHALVNTSDGNYVLRSP 413 Query: 338 LNHKKGDP--NYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENEN 395 + K + + L A K P ++ +DQ+ K K R N Sbjct: 414 RDKKPVKEINAHQLIDLIALSAWKSAEPGLIFFDQINKYNVFAKA----RQAPLRATNPC 469 Query: 396 GEQIHDGRNNLGVISLNLPRIALE-AKGDEATFWKLLDERLVLARKALM 443 GEQ + + S+NL + A G W+ +E + + L Sbjct: 470 GEQSLYPYESCNLGSINLVNLVKRQADGTYEFDWQRYEETIRKTTRFLD 518 >UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQG3_9EURY Length = 305 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 10/168 (5%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRN--QVDIN 59 V+KRDG V F ++I +AI++A + + V V E+++ ++ + Sbjct: 18 VMKVIKRDGRIVDFSEDKIFQAIMKAMNSIGGYGEEDAQRVTRKVVEKIKESRVERITVE 77 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREK------RGRLNQEIRGLVEQTNASL 113 +IQ VE LM Y +A++YI YR +R R+ + L + + L Sbjct: 78 KIQDIVEETLMLEGYINVAKSYILYREERRKIRQAKKVIGVQDDLKLTVNAIKVLEARYL 137 Query: 114 L-NENANKDSKV-IPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDI 159 L +EN N +R + + + ++ Q + D+ Sbjct: 138 LKDENGNVIETPRQMFERTARYLALVDIFYEDDIYDKEGKQKERKIDV 185 >UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=cellular organisms RepID=B2SYU1_BURPP Length = 1001 Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 11/119 (9%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEV-------DDADYCATVAAVVSEQM----QG 52 V++R+G V F+ +I A+ +A A + + V + Sbjct: 39 KVIRRNGSVVSFEPSKIAIAVTKAFLAVNGGQGAASARVRELVEQLTQNVVRALVRSRPN 98 Query: 53 RNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNA 111 I +IQ VE LM G +ARAY+ YR R R ++ GL N Sbjct: 99 GGTFHIEDIQDQVELALMRGGEHNVARAYVLYREKRTQARGHDDQIVANTPGLNVTDNG 157 >UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Chloroflexi (class) RepID=A7NFN4_ROSCS Length = 769 Score = 92.5 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR---NQVD 57 + ++KRDG VPF RI+ A+ R + +A V + + Sbjct: 26 VPTTIIKRDGRVVPFDVTRIENAMARCFASFGRTPDTPIPELAQRVVNIVAAKSQGKPPT 85 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEY 84 + +Q VE L + + A+ YI Y Sbjct: 86 VEGVQDIVEMVLQAAGEFEAAKRYILY 112 >UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=cellular organisms RepID=C1DPR2_AZOVD Length = 1338 Score = 92.1 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 11/109 (10%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSE-----------QMQ 51 V+KR+G V + ++I AI +A A E A + + V+ +M Sbjct: 32 LRVIKRNGTVVAYTDDKITVAITKAFLAVEGGTAAASSRIHETVARLTEQVTTTFRRRMP 91 Query: 52 GRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 + I EIQ VE LM ++AR Y+ YR R ER++ + + Sbjct: 92 SGGTIHIEEIQDQVELALMRAGEHKVARDYVIYREARAQERKRAAAVQE 140 >UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=cellular organisms RepID=B4E5V9_BURCJ Length = 1003 Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVS-----------EQMQG 52 V++R+G V F+ +I A+ +A A A V V Sbjct: 41 KVIRRNGSVVSFEPSKIAIAVTKAFLAVNGGQGAASARVREQVEQLTHNVVRALVRSRPN 100 Query: 53 RNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREK 94 I +IQ VE LM G +ARAY+ YR R +ER+ Sbjct: 101 GGTFHIEDIQDQVELALMRGGEHNVARAYVLYREKRHLERQH 142 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 13/104 (12%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDD-------------ADYCATVAAVVSEQM 50 ++KR+G VPF RI +A+ A + D V V +++ Sbjct: 10 TIVKRNGMFVPFDRNRIFQALEAAFRDTRRIDDHMPLPEDLESSIRSITHQVVKEVVQKI 69 Query: 51 QGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREK 94 V + IQ VE+QL + +AR YI YR DR R+K Sbjct: 70 TDGQVVTVERIQDMVESQLYVNGLQDVARDYIVYRDDRKAHRKK 113 Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 16/141 (11%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDD-------ADYCATVAAVVSEQMQG----- 52 V++R G V F +I A+ +A +A + + + + + +++ Sbjct: 120 VVRRCGTVVHFNPMKISAALEKAFRATDKTEGMTPSSVREEINALTQNIVAEIEECCPQQ 179 Query: 53 RNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNAS 112 ++DI +IQ VE QLM + +A+ YI YR R R+ R + + E+ Sbjct: 180 DRRIDIEKIQDIVEQQLMVVGHYAVAKNYILYREARARVRDNREEDGSTEKTIAEEAVEV 239 Query: 113 LLNENANKDSKVIPTQRDLLA 133 L + S T LLA Sbjct: 240 LSKDG----STYTMTHSQLLA 256 >UniRef50_A4VUA6 Oxygen-sensitive ribonucleoside-triphosphate reductase n=65 Tax=Streptococcus RepID=A4VUA6_STRSY Length = 124 Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSE-----QMQGRNQV 56 V+KR G V F ++I +AI++AA+ V D + +A V + + + Sbjct: 12 FMQVIKRSGEIVEFDPDKIYQAIIKAAQTVYVIDETWRKNLAQVTKKVVLDLEEAHTERP 71 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGR 97 I+ +Q+ VE++L+ Y +A YI YR RD+ER G Sbjct: 72 TISMVQSQVEHRLLDAGYISIAEHYISYRLQRDLERNGYGD 112 >UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KQ2_SYMTH Length = 776 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 63/451 (13%), Positives = 122/451 (27%), Gaps = 78/451 (17%) Query: 89 DIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPR 148 ++ + + + + E +E +A ++A + + Sbjct: 2 ELTHIAKTVMEKRYLRMKEDGTRETPDE-----------MLRRVARVIAAVEEKYGASKK 50 Query: 149 DVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVT 208 ++ ER D+ P P F L L+ F + + P I Sbjct: 51 EIRAVEERFYQLMDRQDFMPNSPTFTGAGTALGQ-LSACFVLPVGDSLP--EIYETMKQA 107 Query: 209 AQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECY 268 A I H GG T + ++ + + + Sbjct: 108 ALI------HQTGGGTGFAFSRLRPAGDVVRSSQGVASGPVSFLRVYNASTEAIKQGGTR 161 Query: 269 DAFQSLEYEVNTLHTAN------GQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNR 322 V+ T F S I ++ + G Sbjct: 162 RGANMGILRVDHPDILQFIESKADITQITNFNI-------SVAITDAFMEALEKGTEYEL 214 Query: 323 KTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPM 382 ++ + L + +E A K P I+ D++ + + Sbjct: 215 INPRNGEVTGKLSAKL----------VWDKLVENAWKTGEPGIVFIDRINRRNPNN---- 260 Query: 383 GCRSFLGVWE--NENGEQIHDGRNNLGVISLNLPRIALEAKGDE-ATFWKLLDERLVLAR 439 + V E N GEQ + + S+NL D W+ L E A Sbjct: 261 ----HVEVIEATNPCGEQPLPPYGSCNLGSINLANFVKNPYTDRAEVDWERLGEVARTAT 316 Query: 440 KALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETIN 499 + L + A P+ + ++ R I LG +G E + Sbjct: 317 RFLD------NVIDANKYPLP-------------QIAEKALRDRR--IGLGIMGWAEMLV 355 Query: 500 ALFGGEHVYDNEQLRAKGIAIVERLRQAVDQ 530 + YD+E+ A G ++ ++Q + Sbjct: 356 QMGLP---YDSEEAVALGNRVMTFIKQKALE 383 >UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Bacteria RepID=C8WK91_EGGLE Length = 845 Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAE-VDDADYCATVAAVVSEQMQ-----GRNQV 56 + KR+G +++ +IK A+ A + V D + + A + M V Sbjct: 1 MQISKRNGTVEAYEAGKIKRAMGAAFASVGKVLDDEEADRLIARIERAMASAEQGEGGSV 60 Query: 57 DINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGR 97 + ++Q VE LM + + ++YI YR DR +R R R Sbjct: 61 SVEDVQDLVERALMEANHYEELKSYILYREDRARKRVARER 101 >UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alpha n=48 Tax=Bacteria RepID=RIR1_TREPA Length = 845 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 103/317 (32%), Gaps = 33/317 (10%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAE----VDDADYCATVAAVVSEQMQGRN---- 54 H++KR+G P+ E+I AI A ++ + + +AA V Q+ N Sbjct: 1 MHIIKRNGEPQPYMREKIIVAISAAFRSVQNPLAPEVPAIITDLAAEVERQLFEMNRAGV 60 Query: 55 QVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRG------LVEQ 108 V + +IQ VE L + +++I YR DR +R R ++ L E Sbjct: 61 PVHVEKIQDFVEKTLTKYNHSDEVKSFILYRDDRTKKRIAREQIACCFTDSSVLGVLKEI 120 Query: 109 TNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQ--AHERGDIHYHDLDY 166 E + + ++ L V LL + V+ A E Sbjct: 121 QQDFPFPEYSL---DALASKFLLFKKEVTDERRSMQLLIKAAVELTAQEAPQWELI-AAR 176 Query: 167 SPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTAT------AVTAQIIAQVASHIY 220 + L+ + F +E A + + Sbjct: 177 LLMLDFSLALGTSLEKLNIHSFYEKITYLEEAGLYGVYIRTHYSRAEIEEAATYLECSRD 236 Query: 221 GGTTINRIDEVLAPFVTASYNKH-RKTAEEWNIPDAEGYANSRTI------KECYDAFQS 273 T + +D +L +V + +T +E + A A + T K Y Sbjct: 237 KLFTYSSLDMILRRYVIRTRAHVPLETPQEMFLGIALHLAMNETQDRMQWVKRFYTVLSK 296 Query: 274 LEYEVNTLHTANGQTPF 290 L+ V T +N + PF Sbjct: 297 LQVTVATPTLSNARKPF 313 >UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Sulfolobaceae RepID=C3N5F1_SULIA Length = 838 Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 92/297 (30%), Gaps = 35/297 (11%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V+KRDG FK E+I K + V D V V + N +D I Sbjct: 13 IKVIKRDGRVDEFKLEKILS------KLSSVPDEVTDGIVNDVQANV--KDNAIDTRAIA 64 Query: 63 TAVENQLMSGPYK-----QLARAYIEYR-HDRDIEREKRGRLNQE-----IRGLVEQTNA 111 VE L+ K +LA+ Y+ R ++ + K N++ L Sbjct: 65 DIVERNLIENSLKYPFLMELAKRYVLARIYNHVFGKGKWKDFNEKDLLLSYNALKVLEAR 124 Query: 112 SLLNE-NANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFF 170 LL + N + + +A +A + +V Q E+ L + P Sbjct: 125 YLLKDPNTLRYIETPQMLFRRVARFLASVERKYGKSEAEVKQLEEKFYEMISSLKFVPNS 184 Query: 171 PMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTA---TAVTAQIIAQVASHIYGGTTINR 227 P L G+L+ F + P K T + + A H GG T Sbjct: 185 PTLMNSETRL-GILSACFVI------PVKDAMTTPEGDGIYDALRATALVHQQGGGTGFD 237 Query: 228 IDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA 284 E+ + TA + P + + + + +H Sbjct: 238 FSEL-----RPKGDVVASTAGVASGPVSFMKVFDASTDVIKQGGKRRGANMGVMHAW 289 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 54/186 (29%), Gaps = 30/186 (16%) Query: 349 IKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGV 408 + ++ A P +L D + + + N GE+ + + Sbjct: 410 LFDEIVKGAWDSGDPGLLFIDTINRRHPVWY------LGKINATNPCGEEPLLPWESCNL 463 Query: 409 ISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGV 468 S+NL + +E G W L E + + L + A P+ Sbjct: 464 GSINLEKFIIERNGKVEIDWDGLAEIISYGVRFLD------NVIDANRYPL--------- 508 Query: 469 RLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAV 528 + + K R + LG +G+ L YD+ + + + Sbjct: 509 -----KQIEDATKRTRK-VGLGVMGLARMFIKL---GIAYDSVDAIYLSYQLAKFIFYHA 559 Query: 529 DQWKEE 534 + E Sbjct: 560 YKASIE 565 >UniRef50_B0KB73 ATP-cone domain protein n=4 Tax=Thermoanaerobacter RepID=B0KB73_THEP3 Length = 85 Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQ--GRNQVDIN 59 V+KRDG F ++I +I A+ A + +A + + ++ G+ Q+ + Sbjct: 1 MKVIKRDGRLQEFDLDKIIRSIGAASDDAGKPLNTSDLHNIARDIEKSIKKLGKEQISFD 60 Query: 60 EIQTAVENQLMSGPYKQLARAYIEY 84 EI+T V + L +K +A+AY+ + Sbjct: 61 EIRTIVIDALEKNGFKDVAKAYMNF 85 >UniRef50_B1XJ17 Transcriptional repressor nrdR n=8 Tax=Bacteria RepID=NRDR_SYNP2 Length = 181 Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 11/140 (7%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDI 58 + V+KR+G F +I ++RA + V +A + Q+Q + + Sbjct: 47 VPISVIKRNGQSEAFDRSKILRGMVRACEKTTVL-PSTLEAIAEEIEAQLQQKPKRSITT 105 Query: 59 NEIQTAVENQLM---SGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLN 115 +I V ++L Y + A Y +++ + ++ EQ N + Sbjct: 106 AQIGDLVLHRLRQESEVAYVRFASVYRQFQGV-----DDFIETLSHLQDNAEQANLWIQT 160 Query: 116 ENANKDSKVIPTQRDLLAGI 135 N +++S+ + + L Sbjct: 161 LNEDEESEDLTSPSVLTPSA 180 >UniRef50_Q2JVG1 Transcriptional repressor nrdR n=7 Tax=Bacteria RepID=NRDR_SYNJA Length = 200 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 9/140 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDI 58 M V+KRDG + F +I + ++RA + +V + + E++Q +V Sbjct: 47 MPIMVIKRDGSRESFNRNKILQGVMRACQKTQVSVKQM-EELVNEIEEKLQLEDVQEVTT 105 Query: 59 NEIQTAV---ENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLN 115 I V +L Y + A Y +++ +D E E + + Sbjct: 106 LRIGEMVLERLQRLSEVAYVRFASVYRKFQGIKDFVTELEQLERLETH---LRRDLERPL 162 Query: 116 ENANKDSKVIPTQRDLLAGI 135 N+ D + GI Sbjct: 163 RNSPPSESESTASPDWVGGI 182 >UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=cellular organisms RepID=Q3ZZA0_DEHSC Length = 761 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 57/376 (15%), Positives = 104/376 (27%), Gaps = 60/376 (15%) Query: 164 LDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGT 223 L++ P P +L L+ F + + SI A TA I H GG Sbjct: 85 LEFLPNSPTLMNAGRELGQ-LSACFVLPVDDSIE--SIFDAVKHTAMI------HKSGGG 135 Query: 224 TINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQ-----SLEYEV 278 T + ++ T + P + A + Sbjct: 136 TGFSFSRL-----RPEQDRVGTTGGVASGPVSFMRAFDVATDVIKQGGTRRGANMAILSI 190 Query: 279 NTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGL 338 + G L S I + ++ G+ + Sbjct: 191 DHPDIMKFVHAKDKAG-VLTNFNLSVAITDKFMQAVKDGVDYDLLNP----------HNG 239 Query: 339 NHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQ 398 ++ + A K P I+ D++ + P + N GEQ Sbjct: 240 EVVSSLNASEVFNKIVHMAWKTGDPGIVFIDRI-----NAYNPTPQLGRIEST-NPCGEQ 293 Query: 399 IHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAP 458 + + S+NL R+ + G +K L + A + L + P Sbjct: 294 PLLPYESCNLGSINLSRMVTVSGGQNTVDYKKLSRVIKSAVRFLD------NVIDVNKFP 347 Query: 459 ILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGI 518 + + E+ K R I LG +G + + L G Y++E Sbjct: 348 LP--------------QIDEMTKKSRK-IGLGVMGFADMLLEL-GVP--YNSENSIKLAE 389 Query: 519 AIVERLRQAVDQWKEE 534 I+ + ++ E Sbjct: 390 EIMCFVNDEAHKFSSE 405 >UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Leptospirillum RepID=A3EPA5_9BACT Length = 732 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 63/435 (14%), Positives = 115/435 (26%), Gaps = 65/435 (14%) Query: 105 LVEQTNASLLNENANKDSKVIPTQRDLLAGIVAK---HYARQHLLPRDVVQAHERGDIHY 161 L L + A + +A +A + + L + + Sbjct: 14 LKVLEKRYLGKDEAGIVRENPEQMFRRIADAIASSNSQSSEREFLAEEYYRFMAS----- 68 Query: 162 HDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYG 221 LD+ P P L L+ F + + P+ T A H G Sbjct: 69 --LDFLPNSPTIMNAGRPLGQ-LSACFVLPVGDSM-PEIFDTVKATALI-------HQTG 117 Query: 222 GTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTL 281 G T + + + + ++ V+ Sbjct: 118 GGTGFSFSRLRPKGAVVRSTGGQASGPVSFMKVINASTDAIKQGGTRRGANMGILRVDHP 177 Query: 282 HTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK 341 F+ L T + I +I + + ++ + + + N + Sbjct: 178 DILE----FIDCKMDL-TQVTNFNISVAITDVFMQAVKEDGE--------YDLIAPHNGE 224 Query: 342 KGDP--NYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQI 399 ++ A P + D T + P R N GEQ+ Sbjct: 225 VVGRLRAREVFDKIAHNAWANGEPGLFFID-----TANRANPTPSRWTYEAT-NPCGEQV 278 Query: 400 HDGRNNLGVISLNLPR-IALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAP 458 + + S+NL R + A G W+ L + LA + L V A P Sbjct: 279 LGPYESCNLGSINLERHVRSSATGKPEVDWERLGRSVYLAVRFLD------NVVDANRFP 332 Query: 459 ILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGI 518 I G I LG +G L E YD+E+ Sbjct: 333 IP---------------ELAAVNQGTRRIGLGIMGFA---RLLMRLEIPYDSEEGLEMAE 374 Query: 519 AIVERLRQAVDQWKE 533 ++ +R ++ + Sbjct: 375 KVMSFIRDEAERTSQ 389 >UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=B0KCF5_THEP3 Length = 770 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 64/428 (14%), Positives = 117/428 (27%), Gaps = 74/428 (17%) Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLPR--DVVQAHERGDIHYHDLDYSPFFPMFNCML 177 ++ K I T ++ + + + DV +R DLD+ P P Sbjct: 20 ENGKPIETVEEMFERVAKTIAEVDLIYDQNADVEAVKKRFYDMMVDLDFLPNSPTLMNAG 79 Query: 178 IDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVT 237 L L+ F + + I A A I H GG T + T Sbjct: 80 RPLGQ-LSACFVLPVGDSME--EIFDAVKYAAII------HKSGGGTGFSFSRLRPKGAT 130 Query: 238 ASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTA------NGQTPFV 291 + + + V+ Sbjct: 131 VRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDILEFIQCKKDNNEIT 190 Query: 292 TFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQ 351 F S I E ++ + K+V +R ++ Sbjct: 191 NFNI-------SVAITEEFMKAVEEDREYDLIDPHTGKVVNRLR----------AREVFD 233 Query: 352 LALECASKRMYPDILNYDQVVKVT-----GSFKTPMGCRSFLGVWENENGEQIHDGRNNL 406 L +E A + P I+ D++ + G ++ N GEQ + Sbjct: 234 LIVEMAWRNGEPGIVFLDRINEKNPTPEVGEIEST-----------NPCGEQPLLPYESC 282 Query: 407 GVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGAC 466 + S+NL + + +G + L E + A L + A P+ Sbjct: 283 NLGSINLENMLKKVEGRYVIDYDKLRETVYDAVHFLD------NVIDANKYPLP------ 330 Query: 467 GVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQ 526 E G I LG +G + L G YD+++ G ++E + + Sbjct: 331 ---------QIEEMTKGTRKIGLGVMGFANMLLRL-GIP--YDSDEAVKLGEELMEFIDE 378 Query: 527 AVDQWKEE 534 + + Sbjct: 379 TSKEASIK 386 >UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Aquifex aeolicus RepID=RIR1_AQUAE Length = 801 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 51/159 (32%), Gaps = 20/159 (12%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 MT +V+KR G K +I+ AI A + VD + Q+Q R+ + E Sbjct: 1 MTMYVIKRSGRKEKLDINKIRIAIKFACEGLNVDPLEL------EADAQIQFRDGITTKE 54 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK 120 IQ + + R L +++ L + L Sbjct: 55 IQQLLIKTAAEKV------SAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDL------ 102 Query: 121 DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDI 159 K P R V K Y + + +++ + D Sbjct: 103 -GKYKPYNRKNFYSFV-KEYVEKGIYGEYLLENYSEEDF 139 >UniRef50_B8HVN1 Transcriptional repressor nrdR n=16 Tax=Bacteria RepID=NRDR_CYAP4 Length = 184 Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 6/101 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDI 58 + V+KRDG + PF ++ I+ A + + + + ++Q R +V Sbjct: 47 VPITVIKRDGQREPFDRSKLLRGIVTAFGKNGIAN-IRVEALVDEIEAELQQRALREVTS 105 Query: 59 NEIQTAV---ENQLMSGPYKQLARAYIEYRHDRDIEREKRG 96 EI AV +L Y + A Y +++ RD E Sbjct: 106 AEIGEAVLQNLKELSEVAYVRFASVYRQFQSIRDFVDELNT 146 >UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyrobaculum RepID=A3MX47_PYRCJ Length = 853 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 78/594 (13%), Positives = 154/594 (25%), Gaps = 92/594 (15%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 V+K +G PF+ E+++ +I RAA+ A V+ + + V + ++ Sbjct: 3 RVLKLNGSVEPFQPEKLRRSIERAAQDAGVEVDGAADIKVERDVGSWELADLVHVELLKK 62 Query: 64 AVEN-QLMSGP--------YKQL-ARAYIEYRHDRDIEREK------------------- 94 A+E +L YK++ R ++ + D + +R Sbjct: 63 AIERPELAEVAKSHLLGRIYKEIFGRDFLRVKSDEEYQRRALAAFEKLAGVIKPEALELL 122 Query: 95 RGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAH 154 R + NA L N N + + Q + A A + + + Sbjct: 123 RQLKLRPEFDRSLSYNALRLFTNGNYALRRLDFQLAETPSMAAARVATAVARDVERARLY 182 Query: 155 ERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQ 214 + L P P + K M F + IE S T Sbjct: 183 YD---YITSLKLIPASPYWFNA-WTSKEMFASCFIL---MIEDCLSSITHPGKRCIYDVL 235 Query: 215 VAS---HIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAF 271 S GG + + + + + Sbjct: 236 TRSGLIQQAGGGVGYDFSLLRPEGDVVRGSAGVASGPISFMKLFDANVEVIKQGGKRRGA 295 Query: 272 QSLEYEVNTLHTANGQTPFVT--FGFGLGTSWESRLIQESILRNRIAGLGKNRKTA---- 325 Q V L S ++ ++ + + Sbjct: 296 QMGTLHVWHPDIRKFIKAKTGELKDVHLQNFNISVVVDDAFMEKALDVDKDPNYPLVNPR 355 Query: 326 -------VFPKLVFAIRDGLNHKKGDPNY-----DIKQLALECASKRMYPDILNYDQVVK 373 + P V + + K ++ + +E A P ++ + Sbjct: 356 IVVEKLGIKPIEVLELTREVQLPKDATVGSVNAKELFREIVEGAWDSGDPGLIFKSNMNA 415 Query: 374 VTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALE---AKGDEATF--- 427 + ++ N E ++ + +NL + E + E Sbjct: 416 SNSLLYVNVDGDRYVWFGTNPCAEVPGADKDVCNLTHINLVKFVKEGCSGRTLEEKLECI 475 Query: 428 -WKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRAS 486 W L E + + L A + DV E ++ R Sbjct: 476 DWAGLAETARVGVRFLDD--------------------AVDISTTGMKDVDETYRKIRK- 514 Query: 487 ISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERL----RQAVDQWKEETG 536 I LG +G+ E + L E Y + ++ + + E G Sbjct: 515 IGLGVMGLAEMLIKL---EIPYASWDAVTLVNRVLAWIYLNALDESAELARERG 565 >UniRef50_B1ZWW1 ATP-cone domain protein n=2 Tax=Opitutaceae RepID=B1ZWW1_OPITP Length = 842 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 33/178 (18%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDA-----------------------DYCAT 41 V+KRDG KV F ++ A+ A D+A Sbjct: 39 VIKRDGSKVRFDQSKVTRALALAFHEVRTDNAPNPYRDHLLACFGLDTETFNEVSRISGA 98 Query: 42 VAAVVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE 101 VA ++ + I ++Q A E + + + ++ARAY+ YR R N Sbjct: 99 VAQMLELYYRDGKHPSIEQVQDAAEKAIAAAGHWEVARAYMLYRARHAERRLAHYVDN-G 157 Query: 102 IRGLVEQTNASLLNENANKDSKVIPT-------QRDLLAGIVAKHYARQHLLPRDVVQ 152 + + + + + A + + LP ++ Sbjct: 158 MADYIAMAKYARYRPDLGRREIFTEGVERVRDMHLTFFADKLERQ--LSSALPAEITD 213 >UniRef50_A7HM70 Transcriptional repressor nrdR n=20 Tax=Bacteria RepID=NRDR_FERNB Length = 153 Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI--N 59 V+K+DG + F ++I +L+A + + D + + Q+Q +++ Sbjct: 48 PITVIKKDGRREKFDRKKILNGLLKAFEKRPITVDDM-ERIVDNIVSQLQKSGTLEVPSE 106 Query: 60 EIQTAVENQLMSGP---YKQLARAYIEYRH 86 I V +L Y + A Y ++R Sbjct: 107 LIGKLVMEELRKVDQVAYVRFASVYKDFRE 136 >UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7X0_COPPD Length = 796 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 56/434 (12%), Positives = 116/434 (26%), Gaps = 65/434 (14%) Query: 113 LLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPM 172 L +EN N +A +A+ + + D+ P P Sbjct: 19 LRDENGNIVETPEQ-LMHRVAHGLAQIETVWGATSEQISSVEQDFFDILWKRDFLPNTPT 77 Query: 173 FNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVL 232 + M + P + + + + GG + Sbjct: 78 LFHAGLPKDPKYRGRRFMSACIVLPIE--DSIDGIFKTLWDAAKIMQAGGGVGYAFSRLR 135 Query: 233 APFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTAN------- 285 + + + + + + Q V+ Sbjct: 136 PKGSLVKSSGGKSSGPVSFMHIYDVMVDVVAQGGKRRGAQMGVLNVHHPDILEFIDAKKE 195 Query: 286 ---GQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKK 342 GQ P F S + E ++ F + + Sbjct: 196 NTSGQGPLHNFNI-------SVAVTEEFVQAYKED------------TTFKLVAPHTGEV 236 Query: 343 -GDPNY-DIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIH 400 G+ N ++ E A + P I+ D++ ++ + N GEQ Sbjct: 237 VGELNAREVMHKIAENAWRTGDPGIIFIDRINQLDYLDDG------RIEAT-NPCGEQPL 289 Query: 401 DGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPIL 460 + + S+NL + + W+ + LA + L ++A PI Sbjct: 290 PPYGSCNLGSINLKHMLKKTDSGYQWDWEKFQRTIRLAVRFLD------NVIEANDYPIP 343 Query: 461 YMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAI 520 ++ + K R I LG +G + ++ L G YD+E+ + + Sbjct: 344 --------------ELEDYAKKARR-IGLGVMGWADALS-LLGIP--YDSEEALEEARKV 385 Query: 521 VERLRQAVDQWKEE 534 L++ +E Sbjct: 386 GAFLKEKSHLASQE 399 >UniRef50_A2RN49 High confidence in function and specificity n=4 Tax=Lactococcus lactis RepID=A2RN49_LACLM Length = 105 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 8/97 (8%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADY-----CATVAAVVSEQMQGR--NQVD 57 V+KR+G V + S RI+ A+ +AA + D V VV + + +++ Sbjct: 10 VIKRNGHVVDWDSFRIQTAVFKAAINGKYKDKPLHANMIANNVTKVVEKVIAELSFEKIE 69 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREK 94 I IQ V QL + K +AR ++ Y+ ++IE+ Sbjct: 70 IETIQNQVIKQL-NDFDKDVARDFLAYKTKQNIEQRH 105 >UniRef50_B8ILE2 Transcriptional repressor nrdR n=96 Tax=Proteobacteria RepID=NRDR_METNO Length = 193 Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 6/94 (6%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI--NE 60 V+KR G KVPF ++++ +I A + V ++D + + ++ Q++ + ++ Sbjct: 49 LTVVKRSGRKVPFDRDKLQRSIDVALRKRSV-ESDRIERLVSGITRQLESSGEPEVTSEA 107 Query: 61 IQTAVE---NQLMSGPYKQLARAYIEYRHDRDIE 91 I V L Y + A Y +R +D E Sbjct: 108 IGELVMEGLKGLDDVAYVRFASVYKNFREAKDFE 141 >UniRef50_UPI00003827C9 COG1328: Oxygen-sensitive ribonucleoside-triphosphate reductase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003827C9 Length = 96 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 6/76 (7%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDD----ADYCATVAAVVSEQMQGR--NQ 55 T V+KRDG + PF RI+ A+ +A D A V V ++ R Sbjct: 17 TLEVLKRDGRRRPFDDARIRAAVTKAFAEVHGDLTATHRRRVAEVVDRVDAEIAARFDAT 76 Query: 56 VDINEIQTAVENQLMS 71 V I EIQ VE+ L+ Sbjct: 77 VKIYEIQGVVEHVLLD 92 >UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCH3_CALMQ Length = 877 Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 77/618 (12%), Positives = 167/618 (27%), Gaps = 129/618 (20%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V+KR+G + F ++ ++ A + + + V+ Q++G+ +V +EI Sbjct: 12 ITVIKRNGLREEFNPVKLLNSLKLA----GAPNPE---RILEEVTSQIKGKGEVTSSEIS 64 Query: 63 TAV---ENQLMSGPYK--QLARAYIEY----RHDRDIEREKRGRLNQEIRGLVEQTNASL 113 +V L+S +K AR Y+ + + + + + + Sbjct: 65 DSVQLMMLNLISEDFKWHDAARNYLLFSIYKQAWGKEVVKSINSGSLTLSEAYRRGLRDW 124 Query: 114 LNENAN----------------------KDSK-----VIPTQRDLLAGIVAK-------- 138 N+ N D R L++ + K Sbjct: 125 FNQGLNQGLWSLDAAKFYEKHLDELMNKLDPSRDLLLTYNGVRTLMSRYLMKRLDGSFFE 184 Query: 139 --HYARQHL----------LPRDVVQAHERGDIHYHDLDYSPFFPMFN-----------C 175 Y + D ++ E+ L + P P C Sbjct: 185 TPQYMWMRIAMGVAYSEVKYGNDPIKWVEKFYDLVSQLKFLPNSPTMFNALTKLGELSAC 244 Query: 176 MLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 +I + L++ N P A++ A + G + E+ Sbjct: 245 FVIPVDDCLSKDSNRDN-----PNCFFGIMD-AAKLAALL--FQAGAGVGYQFGELRPEG 296 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF 295 + + + + Q T Sbjct: 297 DVVKSTSGVASGPLSFMRLFDTLVDVIKQGGKRRGAQMGMLFWWHPDIEKFITSKTGRLK 356 Query: 296 GLGTSWE--SRLIQESILRNRIAGL--------------GKNRKTAV--FPKLVFAIRDG 337 + S I + + + G + + + + V ++ G Sbjct: 357 DVQLQNFNISVTIDDYFMTKALRGEDVYLLNPRECTCLYQTWGQEFIKCYEECVSKVKAG 416 Query: 338 LNHKKGDPN-YDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENG 396 L N ++ +E A P + N D + + + N G Sbjct: 417 LVKVWRRVNAGELWSKIVESAWDSGDPGLWNRDVANMKIEYVNDVVSEKYRVINGTNPCG 476 Query: 397 EQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARV 456 E + + S+NL + G+ + L ++ + LA + L + + Sbjct: 477 EVALYPFESCNLGSINLTKYI---NGNSIDWVSLANDIM-LAVRFLDD------VIDSNQ 526 Query: 457 APILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAK 516 P Y++ A I LG G + + +L + YD+ + A Sbjct: 527 HPHEYLDRA---------------NKASRRIGLGINGWADVLVSL---DIPYDSPKAIAL 568 Query: 517 GIAIVERLRQAVDQWKEE 534 ++ + + + E Sbjct: 569 ADVVMGFVARVAVRASVE 586 >UniRef50_C7NVI2 ATP-cone domain protein n=3 Tax=Halobacteriaceae RepID=C7NVI2_HALUD Length = 160 Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 38/104 (36%), Gaps = 4/104 (3%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATV-AAVVSEQMQGRNQVDINEI 61 V KRDG PF E+++ I RA + VD+ A V A + + V +I Sbjct: 49 LQVKKRDGAIEPFDREKLRAGIERAVEKRPVDEQAVTAIVDAIHDALTEREGRIVTTTQI 108 Query: 62 QTAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRGRLNQEI 102 V L Y + Y + + RE L+ E Sbjct: 109 GDLVSEHLRERDQVAYLRFVSVYEAFADPEEFRRELDAVLDAET 152 >UniRef50_Q1AS42 Transcriptional repressor nrdR n=10 Tax=Bacteria RepID=NRDR_RUBXD Length = 156 Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 6/87 (6%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDINE 60 V+KRDG + PF E+++ + +A V + + +++ R++V Sbjct: 49 LMVLKRDGRREPFDREKLRAGLEKACAKQRVTGEQ-IDLIVDQIEAELRERRRHEVTSRR 107 Query: 61 IQTAVENQLMS---GPYKQLARAYIEY 84 I V +L Y + A Y +Y Sbjct: 108 IGDMVLARLRRLDMVAYLRFASVYRQY 134 >UniRef50_Q04J60 Transcriptional repressor nrdR n=27 Tax=Streptococcus RepID=NRDR_STRP2 Length = 157 Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 6/108 (5%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDIN 59 T V+K+DG + F ++I I+R+A+ V +D V + ++++GR N++ Sbjct: 48 TLVVVKKDGTREQFSRDKIFNGIIRSAQKRPVS-SDEINMVVNRIEQKLRGRNENEIQSE 106 Query: 60 EIQTAVENQLMSGP---YKQLARAYIEYRHDRDIEREKRGRLNQEIRG 104 +I + V +L Y + A Y ++ ++E + + Sbjct: 107 DIGSLVMEELAELDEITYVRFASVYRSFKDVSELESLLQQITQSSKKK 154 >UniRef50_C9R8L5 ATP-cone domain protein n=12 Tax=Bacteria RepID=C9R8L5_AMMDK Length = 163 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 6/117 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI-- 58 + V+K+DG + F +I LRA V D + V +++ R + +I Sbjct: 47 LPLVVIKKDGRRELFDRAKILGGCLRACHKRPVRREDL-ENLVDEVERELRNRLEPEIPS 105 Query: 59 NEIQTAVE---NQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNAS 112 I V +L Y + A Y E+R D + E ++ +++ Sbjct: 106 YVIGELVMEKLKRLDEVAYVRFASVYREFRDSYDFKEEIERLAREKEGEQNVRSDKE 162 >UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=cellular organisms RepID=B5YGJ2_THEYD Length = 584 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 61/416 (14%), Positives = 121/416 (29%), Gaps = 55/416 (13%) Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLI 178 N+ + I L + + + + ++ + E+ L + P P Sbjct: 19 NEKGEPIENPEQLFQRVSSYIAQAEKIYKKNSFEWEEKFHELISSLRFLPNSPALMNAGK 78 Query: 179 DLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTA 238 L F + + SI A I+ GG T + Sbjct: 79 PKAQ-LAACFVLPIEDSIE--SIFKTLKDAALIL------QSGGGTGFNFSSL-----RP 124 Query: 239 SYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLG 298 + R T + P + + + L + F Sbjct: 125 KGDVVRSTGGVASGPVSFMKIFDKASDIIKQGGARRGANMGVL-RVDHPDIFEFIRIKRI 183 Query: 299 TSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECAS 358 S + I ++ + + L KN FP + ++ + K DI +E A Sbjct: 184 ESLSNFNISVAVTDSFMEALFKND---YFPLINPRTKEVVRKVKAK---DIFDEIVESAW 237 Query: 359 KRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIAL 418 + P ++ D + + + N GEQ + SLNL + Sbjct: 238 ETGDPGVIFIDTINRSNPTPHIGQ------IDSTNPCGEQPLLPYEACILGSLNLSKYVK 291 Query: 419 EAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSE 478 E K D ++ L+ + A + L A V +V + Sbjct: 292 EGKID----FERLEHDVKTATRFLDD--------------------AIDVTHYPVPEVEK 327 Query: 479 IFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEE 534 G I LG +G + + L G + + ++ A +++ + + + +E Sbjct: 328 -MHKGNRKIGLGIMGWADCLVEL-GIPYNH--KKALALAEQVMQFISEKSHKASQE 379 >UniRef50_Q3IM07 Transcriptional repressor nrdR n=3 Tax=Halobacteriaceae RepID=NRDR_NATPD Length = 162 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 6/115 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDINE 60 V KRDG F ++++ I RA + V + + ++Q R V + Sbjct: 49 LQVKKRDGTIESFDQQKLRTGIERAVEKRGVA-ETTVTALVDDIESELQDREARIVSSSL 107 Query: 61 IQTAV---ENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNAS 112 I V L Y + Y + ++ +E L E+ ++ Sbjct: 108 IGELVSENLRTLDKVAYIRFVSVYKAFSEPQEFLKELDAVLGAELDDFEASNSSQ 162 >UniRef50_D1CDG5 ATP-cone domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG5_THET1 Length = 158 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 + P V+KRDG + + ++ I A V + + + EQ GR +VD +E Sbjct: 45 VMPLVVKRDGTREEWDRNKLLTGIRLACNKRPVSYSTM-QQIVDEIEEQFSGRQEVDSSE 103 Query: 61 IQTAVENQLM---SGPYKQLARAYIEYRHDRDIE 91 I AV +L Y + A Y+ + Sbjct: 104 IGQAVMKKLRVLDEVAYIRFASVYLRFHDVNGFI 137 >UniRef50_Q1D346 Transcriptional repressor nrdR n=215 Tax=Bacteria RepID=NRDR_MYXXD Length = 168 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 8/99 (8%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI-- 58 + P ++K+DG + F E+I + +A + V AD + Q+QG + ++ Sbjct: 47 LYPLIVKKDGRREAFDREKIVNGLKKACEKRPVS-ADQLEETVVAIERQLQGMGEKEVPS 105 Query: 59 ----NEIQTAVENQLMSGPYKQLARAYIEYRHDRDIERE 93 EI + QL Y + A Y +R + E Sbjct: 106 SVIGEEIMRRL-RQLDEVAYVRFASVYRSFRDIAEFMDE 143 >UniRef50_B1WNA0 Transcriptional repressor nrdR n=10 Tax=Bacteria RepID=NRDR_CYAA5 Length = 187 Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 6/107 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDI 58 + V+K DG K F + ++ ++RA + + T+ + +Q R +V Sbjct: 47 VPITVIKHDGKKESFDASKLLRGMVRACEKTGIS-HQRLETIVDDIEAYLQQRPQREVTT 105 Query: 59 NEIQTAVENQLMSGP---YKQLARAYIEYRHDRDIEREKRGRLNQEI 102 +EI V L Y + A Y ++ +D + I Sbjct: 106 HEIGQLVLKYLREENEVAYIRFASVYGRFKGIKDFVETLDQLQEETI 152 >UniRef50_Q2FSI0 Oxygen-sensitive ribonucleoside-triphosphate reductase-like n=4 Tax=Methanomicrobiales RepID=Q2FSI0_METHJ Length = 120 Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 15/66 (22%) Query: 640 PIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEV 699 I+ C CG CP+CG HD ++ RV GYL +NAGKQ+E+ Sbjct: 67 TIEYCPLCG----------EPVCPECGCHDVVQI---SRVTGYLQDVS--GWNAGKQQEL 111 Query: 700 KRRVKH 705 K R ++ Sbjct: 112 KDRQRY 117 >UniRef50_C6P8I1 ATP-cone domain protein n=6 Tax=Bacteria RepID=C6P8I1_CLOTS Length = 155 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDI 58 + V+K+D + + ++I + +++A + V +A + + ++ Sbjct: 47 VPILVIKKDLSREAYDRDKILKGMIKACEKRPVPIKKL-EDLADEIERDIYNSYEKEITS 105 Query: 59 NEIQTAVENQL---MSGPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 +I V +L Y + A Y +++ E + LN Sbjct: 106 AQIGEMVMEKLKNVDEVAYVRFASVYRQFKDINTFMDELKKLLND 150 >UniRef50_B1L7E4 ATP-cone domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7E4_KORCO Length = 115 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 5/70 (7%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V KR+G + F +I A+++A + + +A + +GR V+ +EI+ Sbjct: 32 TKVRKRNGKEEDFSKMKIVSALIKAGSSV-----ELADKIAEECESKFRGREYVESSEIR 86 Query: 63 TAVENQLMSG 72 V ++L Sbjct: 87 EFVLSRLKEV 96 >UniRef50_B6WBR4 Putative uncharacterized protein n=2 Tax=Anaerococcus RepID=B6WBR4_9FIRM Length = 130 Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 3/85 (3%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM---QGRNQVDIN 59 +V KR+G F E+I +I AA+ ++ ++ E++ + Sbjct: 42 LYVKKRNGKIELFDVEKISRSIKNAARNGNIELNTSDISILKNDLEKIIKKNHHRILPTA 101 Query: 60 EIQTAVENQLMSGPYKQLARAYIEY 84 I+ VEN L YK++ +Y Y Sbjct: 102 TIKEYVENILEEDGYKKVLESYTSY 126 >UniRef50_A6LMS2 Transcriptional repressor nrdR n=3 Tax=Bacteria RepID=NRDR_THEM4 Length = 151 Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 6/90 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI--N 59 V+K+DG + F +I +++A + V + + V +Q ++I Sbjct: 48 PVFVVKKDGKREKFDRAKILNGVMKACEKTNVTLEE-IEKLVDDVVNDVQKSGNLEILTL 106 Query: 60 EIQTAVENQLMSGP---YKQLARAYIEYRH 86 EI V +L Y + A Y ++R Sbjct: 107 EIGKLVMEKLKKLNGVAYVRFASVYKDFRE 136 >UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJC4_DESPS Length = 785 Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 69/490 (14%), Positives = 137/490 (27%), Gaps = 93/490 (18%) Query: 50 MQGRNQVDINEIQ--TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVE 107 +Q +N + I +E L + LAR Y + D E L + V Sbjct: 45 IQYKNDIYKEVIMAPDVMEQVLTTTAETVLARRY-YLKDDAGNSLEDWKALAHRVAEAVA 103 Query: 108 QTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYS 167 +A+ NE + Q + + LD+ Sbjct: 104 PEDATGKNEVTG------------------------------IKQLRDDFFTMIYQLDFL 133 Query: 168 PFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINR 227 P P ++ L+ F + + + I H GG T Sbjct: 134 PNSPCLMNAGTEIGQ-LSACFVLPVE--------DSMDGIFTAIRNGALVHKTGGGTGYS 184 Query: 228 IDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTAN-G 286 + A + T + P + + + + L + Sbjct: 185 FSR-----IRACNASVKSTHGVASGPLSFAAVFDAATETIKQGGKRRGANMGVLRVDHPD 239 Query: 287 QTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPN 346 F++ +I +A L +++ + + LN Sbjct: 240 IMAFISAKEDQDKFNNF-NFSVAITDLFMAALEADKEYDLIEPSTGEVMGQLN------A 292 Query: 347 YDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE--NENGEQIHDGRN 404 ++ ++ A P +L D + + LG +E N GEQ Sbjct: 293 VEVFAKIVDLAWHNGEPGVLFIDAANRDNTT--------PQLGDFEATNPCGEQWLLPYE 344 Query: 405 NLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEG 464 + + S+NL ++ + L + + A L + V PI Sbjct: 345 SCNLGSINLGNFV----KNDEVDYSRLGQIVKTATCFLD------NVIDCNVFPIP---- 390 Query: 465 ACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERL 524 + K + I LG +G+H+ + L Y +E+ R +++ + Sbjct: 391 ---------EIGEMTLKTRK--IGLGIMGLHDLLIQLAIP---YGSEEGRLLAAEVMQFI 436 Query: 525 RQAVDQWKEE 534 R ++ + Sbjct: 437 RDRCEEQSRK 446 >UniRef50_D1Y5R6 Transcriptional regulator NrdR n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5R6_9BACT Length = 180 Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 5/93 (5%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG-RNQVDINEIQT 63 + K+DG + F ++ I RA + + D +AA + +++ ++V I Sbjct: 62 ISKKDGRREAFDRSKLVRGISRACERLPIS-LDTIEDMAARIETRLRESGDEVSSMAIGE 120 Query: 64 AVENQLMS---GPYKQLARAYIEYRHDRDIERE 93 V +L Y + A Y E+ +RE Sbjct: 121 LVMKELAEINKVAYVRFASVYREFTDLSSFQRE 153 >UniRef50_C2BEU7 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BEU7_9FIRM Length = 134 Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 45/91 (49%), Gaps = 4/91 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQGRNQ---VDI 58 +V+K++G F ++++ +I AA A + ++ A + V++++ ++ Sbjct: 44 EYVVKKNGNLEKFNADKLSRSIKNAADMAGMQLNSSDIAIILKDVADKLFHGDKKRLTRT 103 Query: 59 NEIQTAVENQLMSGPYKQLARAYIEYRHDRD 89 NE++ V + L + + ++ AY Y ++ Sbjct: 104 NEVRNIVIDTLANEGFSKIRDAYEAYAQSQN 134 >UniRef50_C0QQA0 Transcriptional repressor nrdR n=4 Tax=Hydrogenothermaceae RepID=NRDR_PERMH Length = 152 Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 6/101 (5%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDIN--EIQ 62 V K++G PF ++I I A+K V + +A + + + ++ + EI Sbjct: 51 VKKKNGTTEPFNKDKIIRGIRLASKNRPVSEKQMV-EIADEIEKYLLEEGKLVVESTEIG 109 Query: 63 TAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 V+ +L Y + Y E++ +D E+ + + Sbjct: 110 DLVQEKLKKIDPVSYLRFKSVYNEFQDIKDFEKALKEIEEK 150 >UniRef50_A5G3K3 Transcriptional repressor nrdR n=5 Tax=Bacteria RepID=NRDR_GEOUR Length = 150 Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 6/103 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDINE 60 P V+K+DG + PF ++ I +A + V + + QMQ G ++ Sbjct: 49 PLVIKKDGRREPFDRMKLVAGIQKACEKRPVSVE-TIERLVDRLEIQMQESGEKEIPSKS 107 Query: 61 IQTAVENQL---MSGPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 + V +L Y + A Y ++ + E + L + Sbjct: 108 LGEWVMAELHSIDQVAYVRFASVYRSFKDITEFMSELQDLLKK 150 >UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URA6_9AQUI Length = 767 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 19/157 (12%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V+KR G + +I+ A+ A K VD + Q+Q R+ + EIQ Sbjct: 1 MEVVKRSGKREQLDINKIRIALEFAFKGLNVDPLEL------ETDAQIQFRDGITTEEIQ 54 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 + + R L +++ + L +KD Sbjct: 55 AVLIRTAAEKVSPE------TPDWQFAAARLLLYDLYKKVAHIRGYEVRDEL----SKDY 104 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDI 159 K T+ + + + +++ + DI Sbjct: 105 KPYNTEGFY---EFINRFVGEGIYGDYLLKHYSESDI 138 >UniRef50_Q1JDF4 Transcriptional repressor nrdR n=213 Tax=Bacteria RepID=NRDR_STRPB Length = 164 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 7/120 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDI 58 + V+K+DG + F ++I ++++A+ V D V + + ++++ N+V Sbjct: 47 LPLLVIKKDGTREQFSRDKILNGVVQSAQKRPVSSTD-IENVISRIEQEVRTTYENEVSS 105 Query: 59 NEIQTAVENQLMSGP---YKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLN 115 I V ++L Y + A Y ++ D E ++ +RG ++ N N Sbjct: 106 TAIGNLVMDELAELDEITYVRFASVYKSFKDV-DEIEELLQQITNRVRGKKKRLNNDETN 164 >UniRef50_A0Q128 Transcriptional repressor nrdR n=21 Tax=Clostridiales RepID=NRDR_CLONN Length = 158 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 39/105 (37%), Gaps = 6/105 (5%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDIN 59 V+KRD + F +I +++A + + ++A + ++M +V Sbjct: 48 PVLVIKRDSNREYFDKTKIINGLVKACQKRPIS-RVQIDSIADEIEKKMNNDMLTEVKSE 106 Query: 60 EIQTAVENQL---MSGPYKQLARAYIEYRHDRDIEREKRGRLNQE 101 I + +L Y + A Y +++ E ++ + Sbjct: 107 YIGELIMEKLKEIDEVSYVRFASVYRQFKDINTFIEEITNLMSDK 151 >UniRef50_C2D6G3 NrdR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6G3_9ACTN Length = 104 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 46/105 (43%), Gaps = 6/105 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDI 58 M V+K+DG K PF E+++ ++ A + D + + + +++ + ++ Sbjct: 1 MPILVIKKDGTKEPFSHEKLRRGLVAATIKRSI-DLNRINQLIDSIETELRDNGKTEITS 59 Query: 59 NEIQTAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 EI V +L+ Y + A Y +++ + E R N+ Sbjct: 60 QEIGMRVLQKLIDIDKVAYVRFASVYRDFKDVEEFSEELRSLSNE 104 >UniRef50_B8G2S3 Transcriptional repressor nrdR n=2 Tax=Chloroflexi RepID=NRDR_CHLAD Length = 174 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 7/130 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDI 58 ++ V+K+DG + P+ E+I + A V AD + V + + ++ Sbjct: 47 VSLMVVKKDGTREPYDREKIARGVRTACYRRPVS-ADAIEQLVNEVETAVMATDQQEISS 105 Query: 59 NEIQTAVENQLM---SGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLN 115 I AV +L Y + A Y + RE L + ++A+ + Sbjct: 106 QFIGDAVMRRLRDLDEVAYIRFASVYRSFADI-GKLREAVDELLEREGTRNGHSSAATTD 164 Query: 116 ENANKDSKVI 125 + + + Sbjct: 165 QGTTDNHSRM 174 >UniRef50_Q0SSR4 Putative uncharacterized protein n=10 Tax=Clostridium RepID=Q0SSR4_CLOPS Length = 89 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQM----QGRNQVD 57 +++K+DG FK E++ ++ AA + +A V E + + + Sbjct: 1 MNIIKKDGRIEEFKIEKLSTSLSNAASDLNFTLNKSDINIIAKDVEETLKKIRKDNGETS 60 Query: 58 INEIQTAVENQLMSGPYKQLARAYIEYRH 86 E+ V + L + + + RAY++YR Sbjct: 61 SYEVIGVVIDTLKNEKFSDVLRAYVKYRK 89 >UniRef50_Q03RK0 Transcriptional repressor nrdR n=49 Tax=Firmicutes RepID=NRDR_LACBA Length = 166 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 6/90 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDIN 59 V+K++G + F E++ I+R+A+ V D + V +++ G +++ Sbjct: 48 PLLVIKKNGTREEFNREKVLRGIIRSAEKRPVG-MDVMTQIVDEVENKIRALGVSEISSQ 106 Query: 60 EIQTAVENQLMSGP---YKQLARAYIEYRH 86 I V N+L+ Y + A Y +++ Sbjct: 107 LIGEYVMNRLVDVDEIAYIRFASVYRQFKD 136 >UniRef50_A6G9U3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9U3_9DELT Length = 235 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 4/99 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAA-VVSEQMQGRNQVDINEI 61 P V+KR G + PF +I+ + A + + V +G ++D EI Sbjct: 20 PMVLKRTGERQPFDRNKIRRGLDIACRKRGISSEGLDRIVQQIETWASTKGDREIDSEEI 79 Query: 62 QTAVEN---QLMSGPYKQLARAYIEYRHDRDIEREKRGR 97 + + L Y + Y + + E+ R Sbjct: 80 GERIMHHLYALDQVAYVRFVSVYRSFDSIAEFEQLLREM 118 >UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=cellular organisms RepID=B2A494_NATTJ Length = 752 Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 60/437 (13%), Positives = 126/437 (28%), Gaps = 77/437 (17%) Query: 110 NASLLNENANKDSKVIPTQRDLLAG---IVAKHYARQHLLPRDVVQAHERGDIHYHDLDY 166 L N +++ +A V K ++ ++V + + + + Sbjct: 12 EKRYLKTNEKGETENPEDMLKRVADNIAQVEKDVYQKD--KQEVSKVSQNFFDLMDNQYF 69 Query: 167 SPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTIN 226 P P +L+ L F + + SI A A I H GG T Sbjct: 70 MPNSPTLMNAGRELQQ-LAACFVLPIEDSME--SIFEAIKNAALI------HKSGGGTGF 120 Query: 227 RIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANG 286 + + T + P + + + + L Sbjct: 121 SFSNL-----RPKNDIVLSTGGVASGPVSFMKVFNSATEAVKQGGTRRGANMGILRV--D 173 Query: 287 QTPFVTFGFGLGTSWESRLIQES--ILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHK--K 342 F S E S I + + ++ + +++++ N + K Sbjct: 174 HPDIQEFITCKRDSDEINNFNISVGITEEFMEAVKQDGE--------YSLKNPKNGQAVK 225 Query: 343 GDPNYDIKQLALECASKRMYPDILNYDQVVKVT-----GSFKTPMGCRSFLGVWENENGE 397 ++ +E A P I+ D++ + G ++ N GE Sbjct: 226 TLRAREVFDKIVEMAWGNGEPGIVFIDKMNENNPTPHIGEIEST-----------NPCGE 274 Query: 398 QIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVA 457 Q + + S+NL ++ + A ++LL E + A L + A Sbjct: 275 QPLLPFESCNLGSVNLSKM----VNNGAVDYQLLKETVHTAVHFLD------NVIDANRY 324 Query: 458 PILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKG 517 P+ +E I LG +G + + L Y++++ Sbjct: 325 PLPEIEKTSKENRK---------------IGLGVMGFGDMLFKL---RIPYNSQEALDLA 366 Query: 518 IAIVERLRQAVDQWKEE 534 ++ + Q +E Sbjct: 367 EKVMGYIDQESKAKSQE 383 >UniRef50_Q6MNX8 Transcriptional repressor nrdR n=6 Tax=Bacteria RepID=NRDR_BDEBA Length = 194 Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRN-QVDINE 60 P ++K+DG + PF E+I + + + + V A A V + + + ++ Sbjct: 47 FPFIIKKDGRREPFSKEKILKGLQASCQKRPVSLAQIDAVVEKISAWVINRGESEISSRL 106 Query: 61 IQTAVE---NQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQ 108 I V QL Y + A Y ++ ++ + Sbjct: 107 IGKKVMAELKQLDDVAYIRFASVYRTFKDVQEFVETLEDAELLDFVDASNP 157 >UniRef50_C5CHN3 Transcriptional repressor nrdR n=16 Tax=Bacteria RepID=NRDR_KOSOT Length = 158 Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDIN 59 V+K+ G + F ++ IL+A + V + +++ + +++ G+ ++ Sbjct: 48 PIFVVKKGGQRERFDRNKVLNGILKACEKRPVSIEE-IENMSSEIEQEVLRSGKAEISSK 106 Query: 60 EIQTAVENQL---MSGPYKQLARAYIEYRH 86 EI V +L Y + A Y E+R Sbjct: 107 EIGEMVMEKLKRKDRVAYVRFASVYKEFRD 136 >UniRef50_A9WKI1 Transcriptional repressor nrdR n=17 Tax=Bacteria RepID=NRDR_CHLAA Length = 166 Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 6/89 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDI 58 ++ V+K+DG + P+ E+I + A V A + V + +++ Sbjct: 47 VSLMVVKKDGTREPYDREKIARGVRTACYRRPVS-AAAIEQLVNDVETAIMNTDEHEISS 105 Query: 59 NEIQTAVENQLM---SGPYKQLARAYIEY 84 I AV +L Y + A Y + Sbjct: 106 QAIGDAVMQRLRDLDEVAYIRFASVYRAF 134 >UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Bacteria RepID=B0RGP9_CLAMS Length = 834 Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 21/118 (17%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 M+ V+KRDG K P+ + RI AI A + + ++ + +A+ + + + + Sbjct: 1 MSITVVKRDGSKEPYDANRINLAIEDATQGLD-ENIGWVTQIASELEITLFDG--ITTQQ 57 Query: 61 IQTAVENQ------------------LMSGPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 + AV L+ YK++ Y + + E R Q Sbjct: 58 LDEAVIQVALQNVKDDPAFDTVAARLLLKTIYKRVLGDYSSPEELKRLHAEHFARNIQ 115 >UniRef50_C7GYP4 Transcriptional regulator NrdR n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYP4_9FIRM Length = 156 Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 40/108 (37%), Gaps = 6/108 (5%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDIN 59 V+K DG + F E+I+++I A + ++ D + + ++ +++ Sbjct: 48 IVKVIKNDGRREDFSQEKIRKSINIACQKRKISQ-DTIEGIIKSIERTIENLDNKEIESK 106 Query: 60 EIQTAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRGRLNQEIRG 104 I V L Y + A Y+++ +E + + Sbjct: 107 AIGGLVMEALKKIDPVAYVRFASVYMDFTEPEGFIKEASKFIEDDKYK 154 >UniRef50_A1RYY0 ATP-cone domain protein n=2 Tax=Thermoproteales RepID=A1RYY0_THEPD Length = 187 Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 7/69 (10%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE 60 M V+KR G F E++ +++ A + +A V +++ +E Sbjct: 1 MPKKVVKRSGKVEEFDREKLVRSMVNA-----GAPEEVAVEIAKEVESKVRDGA--TTDE 53 Query: 61 IQTAVENQL 69 I+ V +L Sbjct: 54 IRRYVLARL 62 >UniRef50_C7RFT0 Putative uncharacterized protein n=2 Tax=Anaerococcus RepID=C7RFT0_ANAPD Length = 132 Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 3/85 (3%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAA-KAAEVDDADYCATVAAVVSEQMQG--RNQVDIN 59 +V+KR G F ++I+ +I AA + A + V + + R + Sbjct: 44 TYVIKRSGSVEKFSKDKIERSIKNAAGDEKAAMNTSDLAIIVDDVLDTLDSDPRKVYKTS 103 Query: 60 EIQTAVENQLMSGPYKQLARAYIEY 84 EI+ +++ L+ Y ++ ++I Y Sbjct: 104 EIKNYIKDSLLKEGYSKVYDSFISY 128 >UniRef50_Q7UG92 Transcriptional repressor nrdR n=1 Tax=Rhodopirellula baltica RepID=NRDR_RHOBA Length = 156 Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 6/106 (5%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDINEI 61 V+K D + PF E+IK I RA V +D + E + ++ I Sbjct: 50 RVVKSDETREPFDREKIKRGIERACSKRAVT-SDEIEKTVQKIEEAIYAEFDMEIPTATI 108 Query: 62 QTAVENQLM---SGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRG 104 V +L Y + A Y ++ +D + Sbjct: 109 GEVVLRKLATLDEVAYIRFASVYRDFDDAKDFLQIVSNLQRDAETE 154 >UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=4 Tax=Bacteria RepID=C6LFM8_9FIRM Length = 757 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 54/406 (13%), Positives = 112/406 (27%), Gaps = 50/406 (12%) Query: 194 EIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIP 253 I PPK A+ +A+ S+ GG I+ LAP +N ++T+ + Sbjct: 78 VITPPKDEIEDIFECAKKLARTYSY-GGGCGID--ISGLAPRGARIHNAAKETSGAVSFM 134 Query: 254 DAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRN 313 + + + + + + F+ L I I + Sbjct: 135 ELYSMVTALIGQNGRRGALMISIDSSHPDVEE----FINLKTDLEK-VTKANISVRIHED 189 Query: 314 RIAGLGKNRKTAV-FPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVV 372 + + +N + + F + V G +K ++ P L +D++ Sbjct: 190 FMKAVKENGEYLLSFTREV----TGERIEKTVQAKELFHKIALTNWDYAEPGALFWDRIT 245 Query: 373 KVT----GSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALE-----AKGD 423 + G N E+ + + S+NL A D Sbjct: 246 GWNLLSNTKEFSYAGV--------NPCAEEPLPAGGSCLLGSINLSEFVQYPFTEAATFD 297 Query: 424 EATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNG 483 F K + + + L + + R + + + G+ AD + G Sbjct: 298 MEGFRKCVQASVRALNEVLEEGLPLHPLQEQRESVAKWRQIGLGIMGLADALLKLGLTYG 357 Query: 484 RASIS-----LGYIGIHETINALFGGEHVYDNEQLRAKGIAIVER------LRQAVDQWK 532 +G+ + + A I+E + + Sbjct: 358 EQDAVAMCDKIGF-AMADAAIATSAELAKEQGAFPACNAEEIMETPYFLANTSEKTRELV 416 Query: 533 EETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFH 578 + G S T + + G+ + Y NS+ Sbjct: 417 RKYGLRNSQLLTIA--PTGTLSTMLGISGGI------EPVYANSYQ 454 >UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Bacteria RepID=B8J271_DESDA Length = 781 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 65/433 (15%), Positives = 120/433 (27%), Gaps = 76/433 (17%) Query: 119 NKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVV---QAHERGDIHYHDLDYSPFFPMFNC 175 N D K+I RDL + A A++ Q + P P Sbjct: 29 NLDGKIIEAPRDLFWRVAAAIAAQEENYKNSSRTPNQLARDFYDLMTSWKFLPNSPTLMN 88 Query: 176 MLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPF 235 +L + + P + A + H GG T + Sbjct: 89 AGTELGQL-------SACFVLPVGDSIEEIFDAVKYAAMI--HKSGGGTGFSFSRL---- 135 Query: 236 VTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGF 295 ++ T + P + + ++ + L + F Sbjct: 136 -RPKDSRVGSTGGVASGPVSFLRIFNTATEQIKQGGTRRGANMGILRV--DHPDILEFIR 192 Query: 296 GLGTSWESRLIQES--ILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGD--PNYDIKQ 351 E S + + + + + + + + N + P D+ Sbjct: 193 AKEKEGEFNNFNLSVGLTESFMQAVENDEQ--------YDLVSPNNGEVMKRLPARDVFD 244 Query: 352 LALECASKRMYPDILNYDQVVKVT-----GSFKTPMGCRSFLGVWENENGEQIHDGRNNL 406 L + A + P I+ D++ + G ++ N GEQ Sbjct: 245 LLVRKAWQSGDPGIVFLDRINRDNPTPDQGEIEST-----------NPCGEQPLLPFEAC 293 Query: 407 GVISLNLPRI---ALEAKGDEAT--FWKLLDERLVLARKALMTRIARLEGVKARVAPILY 461 + S+NL E D A W L + L+ + L + A P+ Sbjct: 294 NLGSINLSCFHVPGHENSADPAAGIDWDELRRVVHLSVRFLD------NVIDASRFPL-- 345 Query: 462 MEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIV 521 D + E + R I LG +G + LF YD++Q G I+ Sbjct: 346 ------------DRIGETVRKNRK-IGLGVMGFADL---LFQLGVPYDSQQGLDLGERIM 389 Query: 522 ERLRQAVDQWKEE 534 ++ + E Sbjct: 390 AFVQGEGHRASAE 402 >UniRef50_Q0AYE0 Transcriptional repressor nrdR n=3 Tax=Bacteria RepID=NRDR_SYNWW Length = 150 Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 6/101 (5%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDINEIQ 62 V+K+ G + F ++I + I RA + V + VA+ + +++ ++V I Sbjct: 51 VIKKGGNREAFDRKKILDGIARACEKRPVSMEEMENMVAS-IERELRDLYEHEVSSKAIG 109 Query: 63 TAVENQLM---SGPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 V ++L Y + A Y ++ + + Sbjct: 110 EMVMDRLQRRDEVAYVRFASVYRQFTDLNSFIKTIDQLKQR 150 >UniRef50_B1YDP3 ATP-cone domain protein n=16 Tax=Archaea RepID=B1YDP3_THENV Length = 91 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 5/71 (7%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 V+KRDG F E+I ++L+A +V +A V + R V E+ Sbjct: 3 KVVKRDGRTEEFIPEKIVVSVLKAGAPVDV-----ARKIARKVECAVMERENVTAQELTR 57 Query: 64 AVENQLMSGPY 74 + +L Sbjct: 58 MILAELKKANE 68 >UniRef50_Q086C8 Transcriptional repressor nrdR n=50 Tax=Gammaproteobacteria RepID=NRDR_SHEFN Length = 149 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDI 58 + P V+KRDG + PF E+++ +LRA + V + + + ++ G +V+ Sbjct: 47 VMPRVIKRDGTRQPFDEEKLRGGMLRAVEKRPVSIDEIEQALTK-IKSTLRATGEREVNS 105 Query: 59 NEIQTAVENQLM---SGPYKQLARAYIEYRH 86 I + QLM Y + A Y + Sbjct: 106 EMIGNLMMEQLMSLDKVAYIRFASVYRAFED 136 >UniRef50_C7LY15 ATP-cone domain protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY15_ACIFD Length = 160 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTA 64 V KR G PF ++++ + A K + A + A V E ++ ++V+ E+ Sbjct: 51 VRKRSGQLEPFDRDKLRRGVQAALKNRPIG-ALEIERLLAEVEEAVRAVDEVESAELGLR 109 Query: 65 V---ENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLV 106 V QL Y + A Y + D R + I + Sbjct: 110 VLEGLRQLDPVAYVRFASVYQNFTDADDFRRVLADLGPKRIAKVR 154 >UniRef50_C8WXT7 ATP-cone domain protein n=10 Tax=Bacteria RepID=C8WXT7_ALIAD Length = 176 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 41/104 (39%), Gaps = 6/104 (5%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDIN 59 V+K+D + F +++ I++A + + A+ V + +++ +V + Sbjct: 50 PLMVVKKDQKREEFSRDKLYRGIMKACEKRPIP-AETLEAVCDEIERKLRLEYEREVPSS 108 Query: 60 EIQTAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 I V + L Y + A Y E+R + +E + Sbjct: 109 VIGERVMDALRELDGVAYVRFASVYREFRDVETLLKEVLALIGD 152 >UniRef50_A3VLS6 Putative uncharacterized protein n=4 Tax=Alphaproteobacteria RepID=A3VLS6_9RHOB Length = 145 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 4/92 (4%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSE-QMQGRNQVDINEIQT 63 V+K +G + F E+++ +I + + V+ ++ +V + G + I Sbjct: 39 VIKSNGRREDFDREKLERSIRISMQKRPVEPERIDQMISGIVRRLESMGETDIPSKTIGE 98 Query: 64 AVENQLMS---GPYKQLARAYIEYRHDRDIER 92 V L Y + A Y ++ D E+ Sbjct: 99 IVMESLARIDTVAYVRFASVYKNFQAADDFEK 130 >UniRef50_A7BD38 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD38_9ACTO Length = 195 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQ--VDINEI 61 V+KR G F ++ + +A + V D +A V EQ++ V NE+ Sbjct: 47 QVVKRSGVVESFSRNKVVSGVKKACQGRPVSDDQLA-ILAQQVEEQLRSTGVSNVSTNEV 105 Query: 62 QTAV---ENQLMSGPYKQLARAYIEYRHDRDIERE 93 A+ L Y + A Y ++ D E+ Sbjct: 106 GKAILPFLRDLDVIAYLRFASVYRQFDTLDDFEQA 140 >UniRef50_Q7U4S9 Transcriptional repressor nrdR n=23 Tax=Cyanobacteria RepID=NRDR_SYNPX Length = 160 Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 4/104 (3%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQGRNQVDIN 59 + V+KR+G + F ++ + RA + +D + Q + +V Sbjct: 47 VPITVIKRNGNREIFSRSKLLHGLNRACEKTGLDASRLETLVEELELKLQQRSGREVSSA 106 Query: 60 EIQTAVENQL---MSGPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 EI V +L Y + A Y +++ D + Sbjct: 107 EIGELVLVELKQMSEVAYIRFASVYRQFQGIDDFVSTLETMNRK 150 >UniRef50_A0PT74 Transcriptional repressor nrdR n=33 Tax=Bacteria RepID=NRDR_MYCUA Length = 154 Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 6/94 (6%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI--NEIQ 62 V+KR G PF E++ + RA + +VDD D +A V + ++ +I +E+ Sbjct: 48 VVKRSGVSEPFSREKVISGVRRACQGRQVDD-DALNLLAQQVEDSVRAAGSPEIPSHEVG 106 Query: 63 TAV---ENQLMSGPYKQLARAYIEYRHDRDIERE 93 A+ +L Y + A Y + D ERE Sbjct: 107 LAILGPLRELDEVAYLRFASVYRSFSSAEDFERE 140 >UniRef50_D1BM27 ATP-cone domain protein n=3 Tax=Veillonella RepID=D1BM27_VEIPT Length = 163 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 6/98 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDI 58 + V+K++G + F ++ +LR+ V V V ++ +V Sbjct: 47 VPLMVLKKNGRRELFDRGKLLNGLLRSCDKRTVP-MSVMEQVVNDVERDIRNEINQEVTT 105 Query: 59 NEIQTAVENQLMS---GPYKQLARAYIEYRHDRDIERE 93 + I V QL Y + A Y ++ + E Sbjct: 106 DRIGELVLQQLKDIDQVAYVRFASVYRKFDNIDSFMEE 143 >UniRef50_Q6A8Y9 Transcriptional repressor nrdR n=4 Tax=Actinomycetales RepID=NRDR_PROAC Length = 168 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRN--QVDI 58 M V KR+G + PF +++ + A K V DAD + V + ++ R ++ Sbjct: 44 MQMTVHKRNGIEEPFSRDKVIRGVRNACKGRPVTDADLA-LLGQRVEDGLRARGVAEIPS 102 Query: 59 NEIQTAV---ENQLMSGPYKQLARAYIEYRHDRDI 90 EI A+ +L S Y + A Y+ Y D Sbjct: 103 EEIGLAILGPLRELDSIAYLRFASVYLNYNTIEDF 137 >UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chloroflexus RepID=A9WCH6_CHLAA Length = 822 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 70/451 (15%), Positives = 124/451 (27%), Gaps = 81/451 (17%) Query: 109 TNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSP 168 LL + T +A +A AR V + ER + P Sbjct: 20 KKRYLLKNEHGDVIETPETMFWRVAETIAAVDARYGASAEQVEERAERFYHLMTQGYFEP 79 Query: 169 FFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRI 228 P L L+ F + + SI A I H GG T Sbjct: 80 NSPTLMNAGRPLGQ-LSACFVLPIDDNL--TSIYETLKHQALI------HQSGGGTGFSF 130 Query: 229 DEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVN-----TLHT 283 + + R T + P + + + + + Sbjct: 131 SRL-----RPRNDVVRSTMGVASGPVSFMDVYNHSTEAIKQGGTRRGANMGILRCDHPDI 185 Query: 284 AN------GQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDG 337 T F S I ++ +R + A RDG Sbjct: 186 LEFITCKLDTTKITNFNI-------SVAITDAFMRAVERDEEYDLINPRTGLGQIASRDG 238 Query: 338 LNH----KKGDPNYD--------IKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCR 385 L H + P + L ++CA P + D+ + P+ Sbjct: 239 LKHPLTGEVLVPAGQPMRLRARMVFDLIVQCAHATGEPGLFFIDR-----ANEYNPV--- 290 Query: 386 SFLGVWE--NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALM 443 LG +E N GEQ + + S+NL + +A + W+ L + + + + L Sbjct: 291 PHLGEYEATNPCGEQPLLAYDVCNLGSINLGKFVTDAGTID---WESLRDVVHESTRFLD 347 Query: 444 TRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFG 503 + A P L +S+ + I LG +G + + G Sbjct: 348 ------NVIDANHYP-----------LEQITQLSQRIRR----IGLGVMGWADML-VRLG 385 Query: 504 GEHVYDNEQLRAKGIAIVERLRQAVDQWKEE 534 Y++ Q ++ + + E+ Sbjct: 386 IP--YNSAQAIDLARQVMRFIDEESKVASEQ 414 >UniRef50_C8PM01 Transcriptional regulator NrdR n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PM01_9SPIO Length = 157 Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 38/92 (41%), Gaps = 8/92 (8%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM----QGRNQVD 57 V+KR+G + PF +++ I R+ + + + + + + + +G ++ Sbjct: 48 PLMVIKRNGRREPFDRSKLERGIERSLEKRPIS-MNEIENIVSDIEDAAVMNSKGAKEIK 106 Query: 58 INEIQTAV---ENQLMSGPYKQLARAYIEYRH 86 E+ V + L Y + A Y ++ + Sbjct: 107 STELGEMVLARLHSLDKVAYIRFASVYKKFNN 138 >UniRef50_B8GRT8 Transcriptional repressor nrdR n=144 Tax=Proteobacteria RepID=NRDR_THISH Length = 172 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 6/111 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDINE 60 P V+KRDG + PF +++K + A + V VA + ++ QG +VD Sbjct: 49 PRVVKRDGSREPFNEDKLKSGMTHALEKRAVSTDKVEEAVA-RIKRKLLGQGEREVDSRR 107 Query: 61 IQTAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQ 108 I V +L + Y + A Y+ + + + + Sbjct: 108 IGEWVMEELRNLDQVAYIRFASVYLSFADVQAFREVIERLEKDLTPEMRKH 158 >UniRef50_A7HX83 Transcriptional repressor nrdR n=85 Tax=Bacteria RepID=NRDR_PARL1 Length = 162 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 41/94 (43%), Gaps = 6/94 (6%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDINE 60 ++K +G +VPF +++ ++ A + V+ + + + +++ G +++ Sbjct: 49 LTIIKTNGRRVPFDRDKLMRSVQIAMRKRPVEQER-IERMVSGIVRRLESMGESEIPSAM 107 Query: 61 IQTAVEN---QLMSGPYKQLARAYIEYRHDRDIE 91 I V L + Y + A Y +R +D E Sbjct: 108 IGKLVMEGLSSLDAVAYVRFASVYRNFREAKDFE 141 >UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoanaerobacteraceae RepID=B7R7T8_9THEO Length = 724 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 74/224 (33%), Gaps = 43/224 (19%) Query: 311 LRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQ 370 G K +P +V+ K P ++ + A + P ++ ++ Sbjct: 226 YDAEWKGDLNEWKAKGYPTVVY---------KEIPARELWNKIVTAAWESAEPGVVFLER 276 Query: 371 VVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKL 430 K++ ++ + N GE + + ++NL + + ++ Sbjct: 277 YNKLSNTYYIT------KIISTNPCGELGLEPYGVCNLGAINLVAFVENGRIN----FEE 326 Query: 431 LDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLG 490 L+E + +A + L V A +L +L + LG Sbjct: 327 LEETVKIAVRFLD-------NVLDLGAYVLPQNKEMAQKLRR--------------VGLG 365 Query: 491 YIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEE 534 +G+ + + + Y +E+ IV+R+R A + E Sbjct: 366 LMGLADALILMNLR---YGSEESLKATEEIVKRIRDAAYRASVE 406 >UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LW62_SYNAS Length = 551 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 54/401 (13%), Positives = 103/401 (25%), Gaps = 70/401 (17%) Query: 147 PRDVVQAHERGDIH--YHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTA 204 + A + L++ P P L L F + + SI + Sbjct: 50 DPEGRSAEMEEAFYEMMTSLEFLPNSPTLMNAGRPLGQ-LAACFVLPVEDSL--DSIFDS 106 Query: 205 TAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTI 264 +TA+I H GG T + + I + Sbjct: 107 VKLTAKI------HQTGGGTGFSFSRLRPKNDVVKSTMGVASGPVSFIRVFNCATEAIKQ 160 Query: 265 KECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKT 324 ++ FV + + +I + +NR Sbjct: 161 GGTRRGANMGILRIDHPDIME----FVAIKRD-PAELTNFNLSVAITDEFMRSYEENRDV 215 Query: 325 AVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVT-----GSFK 379 A+ +N ++ + E A P ++ D + + G + Sbjct: 216 ALINPRTKKAAGKVN------ARELLRFIAEAAWASGEPGVIFLDAINRANPTPHVGEIE 269 Query: 380 TPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLAR 439 N GEQ + + S+NL RI + W+ L + L Sbjct: 270 AT-----------NPCGEQPLLPYESCCLGSINLSRI----VRNGGIDWQRLQKLTHLGV 314 Query: 440 KALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETIN 499 + L + +++ +G I LG +G + Sbjct: 315 RFLDDVVEV--------------------STYPSEEIR-AMTSGNRKIGLGVMGFAHLL- 352 Query: 500 ALFGGEHVYDNEQLRAKGIAIVERLRQAVD----QWKEETG 536 G YD+ G I+ + + + E+ G Sbjct: 353 IRLGIP--YDSPDAERTGGEIIRLIERESKIASNRLAEKRG 391 >UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alpha n=54 Tax=Epsilonproteobacteria RepID=RIR1_HELPJ Length = 788 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 11/130 (8%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 V+KR+G P +I++ A E V ++Q R+++ EIQ Sbjct: 2 ITVVKRNGRIEPLDITKIQKYTKDATDNLEGVSQSEL-----EVDARLQFRDKITTEEIQ 56 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 + + R L ++ G + ENA + Sbjct: 57 QTLIKTAVDKIDID------TPNWSFVASRLFLYDLYHKVSGFTGYRHLKEYFENAEEKG 110 Query: 123 KVIPTQRDLL 132 +++ ++ Sbjct: 111 RILKGFKEKF 120 >UniRef50_C8SAI5 Restriction endonuclease n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SAI5_FERPL Length = 261 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 7/75 (9%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQT 63 V K+DG F ++ + LR+ + V V E++ + +EI Sbjct: 3 RVRKKDGRLEEFDRTKVLKTCLRSGANV-----EIAEKVLRDVEERLYDG--ITTDEILE 55 Query: 64 AVENQLMSGPYKQLA 78 V L+ Y++ A Sbjct: 56 IVIESLLKHGYEKAA 70 >UniRef50_Q0RDY4 Putative regulatory protein nrdR n=1 Tax=Frankia alni ACN14a RepID=Q0RDY4_FRAAA Length = 224 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI--NE 60 V+KR G PF ++ + +A + V D D +A V + ++ ++ Sbjct: 6 LRVLKRSGVAEPFSRAKVITGVRKACQGRPVRDDDLA-LLAQRVEDAVRSSGSAEVPAEA 64 Query: 61 IQTAV---ENQLMSGPYKQLARAYIEYRH 86 I A+ +L Y + A Y+ + Sbjct: 65 IGRAILGPLRELDEVAYLRFASVYLAFES 93 >UniRef50_B8DSV1 Transcriptional repressor nrdR n=108 Tax=Actinobacteria (class) RepID=NRDR_BIFA0 Length = 200 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 6/94 (6%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDI--NEIQ 62 V KR G F ++ + +A + + + D + V E ++ R + +E+ Sbjct: 48 VKKRSGNVEQFDRNKVIAGVRKACQGRPIHEDDL-KRLGQQVEEDLRARGVAQVPSDEVG 106 Query: 63 TAVEN---QLMSGPYKQLARAYIEYRHDRDIERE 93 A+ L Y + A Y + D + Sbjct: 107 KAILRPLKDLDEVAYLRFASVYQNFEDLEDFQHA 140 >UniRef50_B5JJP7 Transcriptional regulator NrdR n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JJP7_9BACT Length = 153 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 4/88 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSE-QMQGRNQVDINEI 61 +V KRDG + F +I ++ RA + VD V ++ + + + + I Sbjct: 49 LYVTKRDGRREDFDKAKIIYSLRRACQKRPVDAEQINILVEDMIDALESEFGMEFPSSAI 108 Query: 62 QTAVENQLMSGP---YKQLARAYIEYRH 86 V L S Y + A Y ++++ Sbjct: 109 GDKVLENLKSIDPIAYIRFASVYKDFKN 136 >UniRef50_D0L1W9 ATP-cone domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1W9_HALNC Length = 175 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 46/127 (36%), Gaps = 6/127 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDINE 60 P ++K +G + F E+++ ++RA + V + + + + +Q G +V + Sbjct: 49 PRIVKSNGARQSFNEEKLRSGMMRALEKRPVATSRIDDEI-DQIKKSLQATGAKEVTARK 107 Query: 61 IQTAVENQLM---SGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNEN 117 I V L Y + A Y+ + + G + + +++ Sbjct: 108 IGDLVMQALRRLDQVAYIRFASVYLSFDNVEAFRAAIEGLNQDSLGQESPSAKSEKMDDA 167 Query: 118 ANKDSKV 124 D V Sbjct: 168 TKVDPDV 174 >UniRef50_UPI0001698138 transcriptional regulator NrdR n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698138 Length = 122 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDINE 60 P V+K+DG +VPF ++++ + RA + V A + + ++ ++ +G ++ + Sbjct: 37 PQVVKQDGSRVPFDEDKLRAGMERALEKRPVSAERVDAAI-SHITRKLTTKGEREIPSLQ 95 Query: 61 IQTAVENQLMSGPYKQLARAYIEYRHDRDIE 91 I V ++L Q+A Y+ + R + Sbjct: 96 IGDLVMDEL--KRLDQVA--YVRFALGRTRK 122 >UniRef50_A5WI35 Transcriptional repressor nrdR n=4 Tax=Gammaproteobacteria RepID=NRDR_PSYWF Length = 153 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 44/101 (43%), Gaps = 6/101 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDI 58 + P ++K +G P+ S+++K +I + V + A + + + ++++ G ++ Sbjct: 47 VMPRIIKSNGRIEPYDSQKLKRSIQLPLQKRPVTLDEQEAMI-SRIEKRIRQLGEREISS 105 Query: 59 NEIQTAVE---NQLMSGPYKQLARAYIEYRHDRDIEREKRG 96 + V +L Y + A Y +++ +E + Sbjct: 106 KGLGEVVMSELKELDDVAYVRFASVYRDFQDIEAFRQELQN 146 >UniRef50_D0LGT6 ATP-cone domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LGT6_HALO1 Length = 164 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 6/106 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDIN--E 60 V+KR F S++++ A+ R + A +A + ++ + ++ + Sbjct: 46 LKVIKRSERVEGFDSDKLQRALERVCRGRSAISASDIRRIARDIEAELVDASAKSVHSGQ 105 Query: 61 IQTAVENQLMSGP---YKQLARAYIEYR-HDRDIEREKRGRLNQEI 102 I +L Y +LA YI+ H R R + Q++ Sbjct: 106 IVDLALRRLADIDRIAYNRLAVNYIDESGHLRTDVRAQSEDGVQQL 151 >UniRef50_B0RZP1 Putative uncharacterized protein n=2 Tax=Finegoldia magna RepID=B0RZP1_FINM2 Length = 127 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 3/82 (3%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVD-DADYCATVAAVVSEQMQ--GRNQVDINEI 61 V+K+ G F E+I +I + + ++ +A + V ++M+ RN EI Sbjct: 45 VLKKLGSVESFDKEKIFHSIAQTSDSSGAKMNASDVNIIVEDVLKKMKSIKRNVYPTTEI 104 Query: 62 QTAVENQLMSGPYKQLARAYIE 83 + VE L Y ++ AY Sbjct: 105 RGYVEEALKEEGYGKVLEAYKN 126 >UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0ME23_RHOM4 Length = 620 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 83/334 (24%), Gaps = 67/334 (20%) Query: 217 SHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY 276 + GG + A + + + + Sbjct: 119 TMQQGGGVGYDFSTLRPAGTRARTTGTIASGPVSFMHIWDAMCATLLSTGARRGAMMATL 178 Query: 277 EVNTLHTANGQTP------FVTFGFGLGTSWESRLIQESILRNRI------------AGL 318 + T F + E E++ R+ G+ Sbjct: 179 RCDHPDIETFVTAKHRPGVLTHFNLSVQVFDE---FMEAVRRDADWPLVFPAAALEDEGM 235 Query: 319 GKNRKTAVF------PKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVV 372 G P +R + + L P +L D + Sbjct: 236 GDGPIVYRRWTGTDGPVPCRVLRV-------VKARALWEQILRATYDYAEPGVLFIDTIN 288 Query: 373 KVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATF-WKLL 431 ++ R + N GEQ + S+NL R EA W+ + Sbjct: 289 RMNNLAY-----REHITAT-NPCGEQPLPPYGACDLGSINLTRFVRAPFTPEADLDWEGI 342 Query: 432 DERLVLARKALMTRIARLEGVKARVAPILYM-EGACGVRLNADDDVSEIFKNGRASISLG 490 E + +A + L + P+ E A G R I LG Sbjct: 343 RETVAVAVRMLD------NVIDVSGFPLPAQAEQARGTRR----------------IGLG 380 Query: 491 YIGIHETINALFGGEHVYDNEQLRAKGIAIVERL 524 G+ + + + G Y +E+ R +++ + Sbjct: 381 ITGLADAL-IMLGLH--YASEEARQLAARVMQTI 411 >UniRef50_A2SK03 Transcriptional repressor nrdR n=2 Tax=Burkholderiales Genera incertae sedis RepID=NRDR_METPP Length = 147 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ-GRNQVDINEI 61 P ++K+DG + F +I+ +++ A + V A + + + + N+V +I Sbjct: 49 PAIVKKDGSRSEFDRSKIRASMMLALRKRPVSIDQVEAALGRIEEKMLATAANEVPSAKI 108 Query: 62 QTAVENQ---LMSGPYKQLARAYIEYRHDRDIER 92 V + L Y + A Y + + R Sbjct: 109 GEMVMRELKKLDKVAYVRFASVYRSFEGVDEFSR 142 >UniRef50_UPI0001C37AA6 transcriptional regulator NrdR n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37AA6 Length = 155 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 7/110 (6%) Query: 1 MTP-HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVD 57 M V KRDG PF ++ I A K V D + +A V + Sbjct: 44 MPLLMVEKRDGSFQPFDRNKLITGIFSAIKKRPVT-IDQVSEIADYVENHYANALKTIAK 102 Query: 58 INEIQTAVENQLMSGP---YKQLARAYIEYRHDRDIEREKRGRLNQEIRG 104 EI V N+L Y + A Y ++ + ++ Sbjct: 103 SKEIGELVLNKLRDLDPIAYIRFASVYEDFTDTASFVAKISEIEHRAEME 152 >UniRef50_C7N9D5 ATP-cone domain protein n=6 Tax=Fusobacteriaceae RepID=C7N9D5_LEPBD Length = 152 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDI 58 ++ V+K++G K P+ E++ I+RA + D + + + ++ + ++ Sbjct: 47 LSLTVIKKNGQKQPYSREKVYNGIIRAFEKRH-SDTEKIEEMIDKIEREILTEYSGEIKS 105 Query: 59 NEIQTAVENQLM---SGPYKQLARAYIEYRHDRDIEREKRGRLNQ 100 +E+ + + L+ Y + A Y ++ +E N Sbjct: 106 SELGDKILSYLIDLDEIAYVRFASVYKKFDSLDSFVKEIEKIRND 150 >UniRef50_B0P1H2 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1H2_9CLOT Length = 149 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 6/97 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE- 60 V+K+D + + +I+ I+++ V A + + ++ ++ Sbjct: 48 PLSVIKKDKTRQLYDRNKIRNGIVQSCHKLPVSMGQIEAAI-DEIETKIYNMGTREVETS 106 Query: 61 -IQTAVENQLM---SGPYKQLARAYIEYRHDRDIERE 93 I V ++L Y + A Y E++ E Sbjct: 107 VIGEMVMDKLKDLNEVAYVRFAAIYREFKDVNTFMSE 143 >UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Blautia hansenii DSM 20583 RepID=C9L7Y1_RUMHA Length = 763 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 100/347 (28%), Gaps = 52/347 (14%) Query: 194 EIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIP 253 +EPP+ + A+ +A+ S+ GG ++ LAP N ++T+ + Sbjct: 78 VVEPPEDNIESIFDCAKKLARTYSY-GGGCGVD--ISKLAPKGARVTNTAKETSGSVSFM 134 Query: 254 DAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRN 313 D + + + + R+ + +L Sbjct: 135 DLYSLVTGLIGQNGRRGALMISIACDHPDLEEFIEIKSDLDKVTKANISIRITDKFMLAV 194 Query: 314 RIAGLGKNRKTAVFPKLVFAIRD-GLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVV 372 ++ K V L F + G +K Y + E P +L +D++ Sbjct: 195 KMR------KPFV---LSFTREETGETIRKEIDAYSVFHKLCEMNWDYAEPGMLFWDRIE 245 Query: 373 KVT----GSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFW 428 + G N E+ + + S+NL E ++ + Sbjct: 246 NWNLLSADKEFSYAG--------TNPCAEEPLPAGGSCLLGSINLSEFVTE---NKTFNF 294 Query: 429 KLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASIS 488 + + +A +AL V P L+ + E ++ R I Sbjct: 295 TDFKKTVDIAVRALNI-------VLDEGLP-----------LHPLKEQRESVRDWRQ-IG 335 Query: 489 LGYIGIHETIN---ALFGGEHVYDNEQ--LRAKGIAIVERLRQAVDQ 530 LG G+ + + +G D A + + Sbjct: 336 LGIFGLADLLIKIGIKYGSPESIDLCDMIGHAMAYQAIMTSNSIAIE 382 >UniRef50_C0DU07 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DU07_EIKCO Length = 106 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDINE 60 P ++K +G +V F +++ ++ RA + A+ + E + G +V Sbjct: 2 PQIIKNNGERVMFDPLKLQTSLQRALHKRPIS-AEAIEHTVHEIEECLYKTGSKEVPSRL 60 Query: 61 IQTAVENQLM---SGPYKQLARAYIEYRHDRDIER 92 I V +L Y + A Y ++ + R Sbjct: 61 IGELVMERLAKLDQVAYVRFASVYKSFKDVAEFTR 95 >UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFV5_9EURY Length = 756 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 47/288 (16%) Query: 247 AEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLI 306 + + + +V FVT +S Sbjct: 150 LASVSFMKLYSITTGIIGQTGRRGAWMITLDVTHPDIE----SFVTI----KKDKKSVRY 201 Query: 307 QESILRNRIAGLGKNRKTAVFPKLVFAIR-DGLNHKKGDPNYDIKQLALECASKRMYPDI 365 ++ + +F + + + KK D+ + ++ A P I Sbjct: 202 ANISVKVYDDFMDAVENDKIF---TLHFKNEKVEFKKEIKALDLWKKRIDTAVNTGDPGI 258 Query: 366 LNYDQVVKVT----GSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIAL-EA 420 + +D++ + G N EQ + + ++NL + Sbjct: 259 MFWDRMKSESPTEYDEKMAIKG--------TNPCSEQPLENYGACDLGAINLDYFVKNQC 310 Query: 421 KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIF 480 W+ LD+ + + L + Y ++ AD+ V Sbjct: 311 TDKAEVDWENLDKTVRYGVRFLD-------------NVLDYSYNRHALKEQADETVYA-- 355 Query: 481 KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAV 528 I LG +G+ + ++ YD+++ ++++++++ Sbjct: 356 ----RRIGLGIMGLANMLISMNLR---YDSDKAIEFVDSLMKKIKETA 396 >UniRef50_A8SJE3 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJE3_9FIRM Length = 148 Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 9/98 (9%) Query: 1 MTPHVM---KRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQ 55 M V+ K+DG + F ++ I + + + D + +V + ++ +N+ Sbjct: 44 MPEFVIFVLKKDGSRQIFSRNKVFAGIKKCCEKRNIQDKE-IESVIDSIEMDIRQNYKNE 102 Query: 56 VDINEIQTAV---ENQLMSGPYKQLARAYIEYRHDRDI 90 + +I V L Y + A Y E++ + Sbjct: 103 IKSTQIGELVLKYLKSLDEVSYIRFAAVYKEFKDIKAF 140 >UniRef50_Q73N26 Transcriptional repressor nrdR n=2 Tax=Bacteria RepID=NRDR_TREDE Length = 151 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 3/100 (3%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V+K+DG + PF +++++ I RA + V + + +Q + ++ EI Sbjct: 48 PFMVIKKDGRREPFDRKKLEKGIERALEKRPVSLNS-IENIVTEIEDQAVLNSGLN-KEI 105 Query: 62 QTAVENQLMSGPYKQLAR-AYIEYRHDRDIEREKRGRLNQ 100 +T V +++ + + AYI + +N+ Sbjct: 106 ETTVLGEMVLSHLYSIDKVAYIRFASVYKQFSNLDEFVNE 145 >UniRef50_Q3ZZA1 Transcriptional repressor nrdR n=6 Tax=Bacteria RepID=NRDR_DEHSC Length = 175 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQ--VDINE 60 V+K+D + F E++ + RA + + A VA + ++ + + Sbjct: 47 LFVVKKDQRREEFNKEKLLSGLRRACEKRPLP-AGAVDKVAGDIEAELYNMGKAEIPSTL 105 Query: 61 IQTAVENQ---LMSGPYKQLARAYIEYRHDRDIEREKRGRLN 99 + V + L + Y + A Y E+ +++ +N Sbjct: 106 LGDMVMERLKMLDNIAYVRFASVYREFTDITQLKKVVDNLVN 147 >UniRef50_C1F652 Transcriptional repressor nrdR n=63 Tax=Bacteria RepID=NRDR_ACIC5 Length = 168 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 6/100 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDIN 59 V+K+DG + F ++ +LRA + + A + + + Sbjct: 48 PYMVVKKDGRREKFDRHKVLSGLLRACEKRPIS-ATKLENLVDETEAYLMDSAERERSTT 106 Query: 60 EIQTAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRG 96 EI + +L Y + A Y +++ + + E Sbjct: 107 EIGLLLMEKLKQLDTVSYIRFASVYRDFKDVNEFKEELEQ 146 >UniRef50_B2UQD6 Transcriptional repressor nrdR n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=NRDR_AKKM8 Length = 163 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 4/106 (3%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR-NQVDINEI 61 V+KRD + E+I +++A + V V ++SE + +V +EI Sbjct: 49 LRVVKRDNLREALNREKILRGLVKACEKRPVSMDRLDRAVEEIISELHRDHLREVPSSEI 108 Query: 62 QTAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRGRLNQEIRG 104 V +L + Y + Y ++ + + +E +Q + Sbjct: 109 GKKVIEKLYAIDPVAYIRYVSVYRQFSNVEEFIQEITQMRHQTLID 154 >UniRef50_A5ZR79 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZR79_9FIRM Length = 121 Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 6/102 (5%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDIN 59 V+K+D + + +I+ ILRA + ++ + + ++ Sbjct: 19 PLSVIKKDQTREQYDRSKIQGGILRACYKRPIPVEK-IESLMDSIEGDIFDTADKEISST 77 Query: 60 EIQTAVENQLMS---GPYKQLARAYIEYRHDRDIEREKRGRL 98 I V L Y + A Y E++ E + + Sbjct: 78 RIGEIVMEHLKDLDAVAYVRFASVYREFKDVSTFMDELKKFM 119 >UniRef50_A1TYW9 Transcriptional repressor nrdR n=65 Tax=Proteobacteria RepID=NRDR_MARAV Length = 172 Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 6/98 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQ--GRNQVDI 58 + P V+K+DG + PF E+++ I++A + V + A + + +++ G +V Sbjct: 47 VMPRVVKQDGTRQPFDEEKLRAGIMKALEKRPVSIEEIDAAL-NRIKYRLRSTGEREVKS 105 Query: 59 NEIQTAVE---NQLMSGPYKQLARAYIEYRHDRDIERE 93 ++ V QL Y + A Y ++ + + E Sbjct: 106 MQLGEEVMTELRQLDKVAYVRFASVYRSFQDINEFKEE 143 >UniRef50_C3X5R9 Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Proteobacteria RepID=C3X5R9_OXAFO Length = 60 Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 2/40 (5%) Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 R V RV GY FN GKQ E + RV + Sbjct: 8 QEKRQRCEVWTRVMGYHRPVSE--FNPGKQSEHRDRVHFV 45 >UniRef50_C9KLA5 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLA5_9FIRM Length = 94 Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Query: 670 ASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 + RR+ GYL R +N K+ E RVKH Sbjct: 57 PQKFERIRRITGYLVGTIDR-WNDAKRAEEHDRVKH 91 >UniRef50_D1AYC7 ATP-cone domain protein n=2 Tax=Fusobacteriaceae RepID=D1AYC7_STRM9 Length = 154 Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 33/91 (36%), Gaps = 6/91 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDI 58 + V+K++G F +I + I+R+ + + ++ ++ Sbjct: 47 LPIVVIKKNGEVEEFDRNKIYQGIIRSLVKRSYVQNKVDEMI-DEIEREILTNYDGKIHS 105 Query: 59 NEIQTAVENQLM---SGPYKQLARAYIEYRH 86 N + + +L Y + A Y ++ + Sbjct: 106 NVLGDTILEKLFLFDEVAYIRFASVYNKFEN 136 >UniRef50_D0WEJ6 Iron oxidase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEJ6_9ACTN Length = 118 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 33/95 (34%), Gaps = 5/95 (5%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQG--RNQVDIN 59 V+K DG F E++ I A D + + ++ R +++ Sbjct: 17 PLIVVKADGSSQVFNREKLYRGISIACAKRPNIPNDKKTEIIDAIETALRNSGRAEINSK 76 Query: 60 EIQTAVENQ---LMSGPYKQLARAYIEYRHDRDIE 91 ++ V L Y + A Y +++ + + Sbjct: 77 DLGDMVLEHLKPLDDVAYIRFASVYKDFQSIEEFQ 111 >UniRef50_C1XFP5 Transcriptional regulator NrdR n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XFP5_MEIRU Length = 161 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 5/103 (4%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEI 61 V+KR G K F ++ + AA+ + D + A + ++ + EI Sbjct: 36 PLLVIKRSGRKETFDPNKLLRGLSLAARKRPI-DPEVLQEFAFGFEDTVKEME-ITSEEI 93 Query: 62 Q---TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQE 101 A +L Y + A Y E+ + E R + Sbjct: 94 GLRSLAFLKELDPVAYIRFASVYREFDSLENFIEEVRKLDRKP 136 >UniRef50_B2UYR3 Putative uncharacterized protein n=3 Tax=Clostridium botulinum RepID=B2UYR3_CLOBA Length = 89 Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 39/85 (45%), Gaps = 3/85 (3%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDAD-YCATVAAVVSEQMQ--GRNQVDIN 59 +++K++G FK +++++IL A++ +D + V+ + R + Sbjct: 1 MNIIKKNGRIEEFKISKVRQSILSASEEVTEPLSDAELKLIEKEVNNILSKLNRTETSSY 60 Query: 60 EIQTAVENQLMSGPYKQLARAYIEY 84 E+ N L +K + ++Y++ Sbjct: 61 EVFGICLNALNELGFKAVCKSYLQG 85 >UniRef50_A3UCB8 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UCB8_9RHOB Length = 116 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE-- 60 HV+K DG + F +++ ++L A++ + + + + + + +++ R D+ Sbjct: 6 LHVIKSDGKREGFDRDKLARSVLLASQKRAI-ERERVEQMISGIVRRLESRGDPDVPASV 64 Query: 61 IQTAVENQLMS---GPYKQLARAYIEYRH 86 I V + L + Y + A Y +++ Sbjct: 65 IGELVMDGLRNLDTVAYVRYASVYKDFQE 93 >UniRef50_B1H0N3 Putative ribonucleoside-triphosphate reductase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0N3_UNCTG Length = 59 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706 + + ++ V RV GYL + +N GK+EE K R + Sbjct: 19 SVEGTKCEVYSRVVGYLRPVAS--WNEGKREEFKIRKNYC 56 >UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=unclassified Siphoviridae RepID=A9J500_9CAUD Length = 580 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 94/318 (29%), Gaps = 41/318 (12%) Query: 211 IIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDA 270 +I ++ SH G + I + + V +S ++ + + + D Sbjct: 95 LIRKLQSHSSGPISFMHIFDAICKCVASSGHRRGAQMGVMRVDHPDIEEFIHAKQPGKDV 154 Query: 271 FQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKL 330 + A Q ++ L + + + +I + + FP L Sbjct: 155 QPLWDLVAELPEGAQKQQLIMSLQQTLKLTGFNVSV--AITDKFMECVASGEP---FP-L 208 Query: 331 VFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGV 390 F +G +++ D + + P +L D + ++ + C + Sbjct: 209 TF---EGRTYREVDARA-LWDAIMRGTWDWAEPGVLFIDAINRMNNLWY----CETIAAT 260 Query: 391 WENENGEQIHDGRNNLGVISLNLPR-IALEAKGDEATFWKLLDERLVLARKALMTRIARL 449 N GEQ + S NL + I + G A W E + +A+ Sbjct: 261 --NPCGEQPLPPYGACLLGSFNLVKYIYKDGAGCFAFDWDQYREDIPQVVRAMD------ 312 Query: 450 EGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYD 509 V R L + + LG G+ AL H Y Sbjct: 313 -NVVDRAIYPLPQQKQEAKDKRR--------------MGLGITGLANAAEAL---GHEYG 354 Query: 510 NEQLRAKGIAIVERLRQA 527 + A +++ LR Sbjct: 355 SPAFLAFEAEVLDTLRDE 372 >UniRef50_C3XBZ1 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Proteobacteria RepID=C3XBZ1_OXAFO Length = 65 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 2/39 (5%) Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 R V RV GY FN GKQ E RV Sbjct: 13 QEKRQRCEVWTRVMGYHRPVSE--FNPGKQSEHHDRVHF 49 >UniRef50_Q9X7J8 Anaerobic ribonucleotide reductase (Fragment) n=1 Tax=Pseudomonas stutzeri RepID=Q9X7J8_PSEST Length = 63 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 21/45 (46%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVV 46 V KRDG F+ ++I+ AI+ A A +A +A V Sbjct: 16 PVSVRKRDGRLAAFEVDKIERAIVAAGAATGEFEAPVAQPLAEAV 60 >UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bacteria RepID=Q3AEA3_CARHZ Length = 1101 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 53/147 (36%), Gaps = 28/147 (19%) Query: 388 LGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIA 447 G+ + GEQ + + S+NL + D W+ L++ + LA + L Sbjct: 609 NGILSLDCGEQPLLPYESCNLGSINLANMV----KDGEIDWEHLEKTVKLAVRFLD---- 660 Query: 448 RLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHV 507 + P+ ++ ++ K R I LG +G + + L Sbjct: 661 --NVIDVNHYPLP--------------EIEKMTKKTRK-IGLGVMGFADMLIKLNIP--- 700 Query: 508 YDNEQLRAKGIAIVERLRQAVDQWKEE 534 YD+E+ ++E + + + E Sbjct: 701 YDSEEALNLADKVMEFINKKSKEASAE 727 >UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkholderiales RepID=Q2T3W9_BURTA Length = 881 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 46/400 (11%), Positives = 98/400 (24%), Gaps = 43/400 (10%) Query: 147 PRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATA 206 P ++ E + + + + + L F + Sbjct: 86 PPELRDEIEARFVEHLQRGALGAGRIMSAAGSSIAATLINCFVQPVGDCIQGVDERGLPG 145 Query: 207 VTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKE 266 + ++ + GG + + I + + Sbjct: 146 IYVALLQAAETMRRGGGVGYNFSAIRPRGAYVHSTGSSASGPCSYIDVFDASCRTVESAG 205 Query: 267 CYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAV 326 Q + + + G S + ++ + L Sbjct: 206 ARRGAQMAVLDCDHPDLLEFIEAKHSKGRWNNF-NISVAVTDAFMNAVEQDLPWQLVHRA 264 Query: 327 FPKLVFAIRDGLNHKKG-------DPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFK 379 P L+ + I + P ++ ++ + + Sbjct: 265 EPSPALRAAGDLHRRDDGMWVYAERRARAIWDKIMRSTYDVAEPGVVFISKMNDDN-NLR 323 Query: 380 TPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA----KGDEATF-WKLLDER 434 R+ N GEQ + LNL R ++ G E+ F W L ER Sbjct: 324 AIESIRAT-----NPCGEQPLPAYGCCNLGPLNLTRFVIDPFARLDGGESVFDWDALAER 378 Query: 435 LVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGI 494 T++ L+ V L + + I +G+ G+ Sbjct: 379 TR-------TQVRFLDDVLDVTLWPLPEQRHEAQQKRR--------------IGIGFTGL 417 Query: 495 HETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEE 534 +T+ L YD ++ R + +R A + E Sbjct: 418 GDTLVMLGLR---YDAQEGRDFAARVAREMRDAAYRASVE 454 >UniRef50_C4IB17 Putative anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IB17_CLOBU Length = 91 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 3/84 (3%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEV-DDADYCATVAAVVSEQMQ--GRNQVDINEI 61 V K+ G K F +++ +I A + V ++ M+ + + EI Sbjct: 3 VSKKTGKKEEFDISKVRRSIANAGSDCNIMLTESDLLNVCRMIENTMKAMEKEETSSYEI 62 Query: 62 QTAVENQLMSGPYKQLARAYIEYR 85 V +L Y ++ +YI Sbjct: 63 FGLVVFKLRELNYTEVVHSYIRGA 86 >UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=uncultured archaeon RepID=D1JF25_9ARCH Length = 919 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 87/322 (27%), Gaps = 49/322 (15%) Query: 78 ARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSK---VIPTQRDLLAG 134 A+ YI Y R + + L+ + + A +L + VI T + A Sbjct: 2 AKPYISYHQQRADIQGLKKLLSDKSDLNLSANAAEVLKRRYLLKDELERVIETPSQMFAR 61 Query: 135 IVAKHYARQHLLPR---DVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMG 191 + + + +V + +R + H L++ P P DL L F + Sbjct: 62 VAKAIARAEQNYGKSKAEVKKIEQRFYLLMHSLEFLPNSPTLMNAGTDLGQ-LAACFVIP 120 Query: 192 NAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWN 251 + I A A+I H GG T + + + T + Sbjct: 121 VEDSIEG--IFGAVKDMARI------HQSGGGTGFSFSRL-----RPKGDVVKSTGGVAS 167 Query: 252 IPDAEGYANSRTIKECYDAFQSLEYEVN-----TLHTANGQTP-----FVTFGFGLGTSW 301 P + + + F F Sbjct: 168 GPVSFMRVFDVATDVIKQGGKRRGANMGIICADHPDILEFIRAKERGEFANFN------- 220 Query: 302 ESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRM 361 S + + + + V I+ G ++ + A K Sbjct: 221 TSVAVTDEFMHAVDRNEEYELINPRTKEEVRKIKAG----------EVFNEIVTYAWKIG 270 Query: 362 YPDILNYDQVVKVTGSFKTPMG 383 P I+ D++ + + + +G Sbjct: 271 DPGIIFLDEINR--HNPVSAVG 290 Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 28/143 (19%) Query: 395 NGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKA 454 GEQ ++ + S+N+ + + W+ L E + + + L Sbjct: 605 CGEQPLLPYDSCNLGSINVSKFVE----NGEIDWERLKEAVWSSVRFLDD---------- 650 Query: 455 RVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLR 514 + ++ K R I LG +G+ E + L + YD++ Sbjct: 651 ----------VIDENRYPLSKIEKMTKANRK-IGLGIMGLAELLIKL---KIAYDSKDAV 696 Query: 515 AKGIAIVERLRQAVDQWKEETGY 537 +++ + Q E G Sbjct: 697 LMAEKLMQFITNEARQCSTELGL 719 >UniRef50_Q2GE55 Transcriptional repressor nrdR n=2 Tax=Neorickettsia RepID=NRDR_NEOSM Length = 149 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRN-QVDINEI 61 V+K++G F E+ ++ A + V + +V+ + + + ++ I Sbjct: 49 IKVIKKNGSCESFDREKAMRSVEVALRKRPVTRERVDELMNSVIYKIERIHDAKITAKVI 108 Query: 62 QTAVENQLM---SGPYKQLARAYIEYRHDRDIER 92 + +L + + A Y+ + +++D + Sbjct: 109 GELIMEELATLDKVAFIRFASVYMNFENEKDFVQ 142 >UniRef50_Q3YSX9 Transcriptional repressor nrdR n=10 Tax=Anaplasmataceae RepID=NRDR_EHRCJ Length = 153 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 6/103 (5%) Query: 5 VMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQ--VDINEIQ 62 V+K++G PF +++ +IL A K V + + + +++G+ + V + I Sbjct: 51 VIKKNGETEPFNKQKLLSSILIATKKRPVS-HEGINVMVNNIFYELEGKKENAVPTDVIG 109 Query: 63 TAVENQLM---SGPYKQLARAYIEYRHDRDIEREKRGRLNQEI 102 V + L Y + A Y+ +++ D +N++I Sbjct: 110 KMVMDNLFKLDKVAYVRFASVYMNFKNINDFSNIIAKIINEQI 152 >UniRef50_B3DVB4 Transcriptional repressor nrdR n=4 Tax=Bacteria RepID=NRDR_METI4 Length = 166 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 4/93 (4%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE-I 61 V KR+G F ++ I +A + + + V ++ E ++ + + I Sbjct: 49 LFVKKRNGSIEQFDRNKLMIGIQKALEKRPITQSQIEDFVDQIIEECSAEKSPIIPSFVI 108 Query: 62 QTAVENQL---MSGPYKQLARAYIEYRHDRDIE 91 T V N+L + + A Y ++ +D Sbjct: 109 GTKVMNKLKTIDEVAFIRFASVYCKFHDAKDFM 141 >UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E2 Length = 790 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 69/210 (32%), Gaps = 19/210 (9%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62 +V KR+G PF +I++A+ A V+ + + + + ++IQ Sbjct: 1 MNVTKRNGATEPFSPSKIEKAVNWAVDGTSVESQEVIDK------AILLIYDGIKTSDIQ 54 Query: 63 TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122 L+ G K + + + R L + + G+ + + KD Sbjct: 55 ----QALIKGAAKLV--SATKADASLVSARLLLLDLYKTVCGVNGKVSGGGFQYPHIKDY 108 Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182 LL + +Y + + ++ HY LD F D++ Sbjct: 109 LEKGVSLKLLDPELL-NYDLERI--NAAIKPERDLSFHYLGLDTLADR-YFIRANRDIRL 164 Query: 183 MLTQGFKMGNAEIEPPKSIS--TATAVTAQ 210 G GN IE P+ A V + Sbjct: 165 EKETGNMSGNI-IELPQHFWMRVAMGVALK 193 >UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Firmicutes RepID=C8WWY9_ALIAD Length = 772 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 11/100 (11%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE--- 60 V KRDG P ++I + R +AAE D + +AA V Q++ + +E Sbjct: 29 TVEKRDGRIEPLSLDKIFAFLKRGCEAAEGCDPE---RLAADVWPQLRDG--MRTSEIAR 83 Query: 61 --IQTAVENQ-LMSGPYKQLARAYIEYRHDRDIEREKRGR 97 IQ AVE + ++ +A + + + R + R Sbjct: 84 VAIQAAVEKTSVAEPGWQFVAARLLLFDAYKQASRNRGYR 123 >UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Methanomicrobia RepID=A7I485_METB6 Length = 741 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 55/373 (14%), Positives = 98/373 (26%), Gaps = 67/373 (17%) Query: 164 LDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGT 223 L + P P ++ L+ F + P +I + H GG Sbjct: 51 LRFLPNSPTLMNAGTEIGQ-LSACFTLPV-----PDTIDGIFDAMKEGAII---HKTGGG 101 Query: 224 TINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHT 283 T + + + + V Sbjct: 102 TGYNFSHIRPEGSPVQSTDGVASGPISFMRVFNAATDVIKQGGRRRGANMGILNVWHPDI 161 Query: 284 ANGQTP------FVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDG 337 + F F S ++ + + A F + G Sbjct: 162 LAFISAKKKEGEFSNFNI-------SVMVNDKFMDLVAAK--------SF--ETVWLTKG 204 Query: 338 LNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGE 397 +K I +E K P IL YD++ + + + N GE Sbjct: 205 GTGEK-ITVGQIWNGIVEGIWKNGEPGILFYDEINRHNPTPQ------LGEIDTTNPCGE 257 Query: 398 QIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVA 457 Q + + S+NL E DE LL + +A + L I Sbjct: 258 QPLLPYESCVLGSINLAACVREGAFDED----LLRDTSRMATRFLDLVIE--------KN 305 Query: 458 PILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKG 517 + A R I LG +G+H+ + L YD+E+ RA Sbjct: 306 VFPIPQIAEATRKTRK-------------IGLGVMGVHDAMLMLGLS---YDSEKGRAWC 349 Query: 518 IAIVERLRQAVDQ 530 +++ + + + Sbjct: 350 EWVMKVITETAIE 362 >UniRef50_C8WNX8 Putative uncharacterized protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WNX8_EGGLE Length = 129 Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 1/36 (2%) Query: 670 ASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 RR+ GYL R +N K E RVKH Sbjct: 80 PVPFDRIRRITGYLVGTMDR-WNDAKTSEESDRVKH 114 >UniRef50_A6DMG1 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMG1_9BACT Length = 157 Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 6/107 (5%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR--NQVDINE 60 V+K G K F ++++E + A + V D D + + R +V +E Sbjct: 49 LMVIKSGGRKEDFNIQKVREGLQLALRKRPVGD-DAINEAVENIKLSVSDRLDREVFSHE 107 Query: 61 IQTAVE---NQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRG 104 I V +L Y + A Y E++ + + + + Sbjct: 108 IGEMVMIELKRLDEVAYVRFASVYREFKDASEFIETIQSMQSVDYDS 154 >UniRef50_Q5P7P0 Transcriptional repressor nrdR n=3 Tax=Rhodocyclaceae RepID=NRDR_AZOSE Length = 171 Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 9/107 (8%) Query: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQM--QGRNQVDINE 60 PH++KR+G + F+ +++ ++ A + V A V + ++ G +V + Sbjct: 49 PHIVKRNGNRSEFEHDKLAGSMKLALRKRPVTLEALDAAV-DRIEAKLLALGEQEVPSEK 107 Query: 61 IQTAVENQ---LMSGPYKQLARAYIEY---RHDRDIEREKRGRLNQE 101 + V + L Y + A Y + ++ RE + R + Sbjct: 108 VGELVMRELKKLDKVAYIRFASVYRNFADVDEFAEVIREVKARPKRN 154 >UniRef50_B2KDZ3 Putative uncharacterized protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDZ3_ELUMP Length = 62 Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%) Query: 670 ASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVK 704 S+ V RVCGYL +N GK+EE R Sbjct: 25 GSKCEVYSRVCGYLRPTS--NWNDGKREEFGMRKF 57 >UniRef50_A1SNC7 Transcriptional repressor nrdR n=10 Tax=Actinomycetales RepID=NRDR_NOCSJ Length = 172 Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 4/100 (4%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATV-AAVVSEQMQGRNQVDIN 59 M V+KR G PF E+ + +A K V + A + ++ G +V + Sbjct: 44 MQLTVLKRSGASEPFTREKAVAGVRKACKGRPVTEDQLACLGQAVEDALRLDGAAEVPAH 103 Query: 60 EIQTAV---ENQLMSGPYKQLARAYIEYRHDRDIEREKRG 96 E+ A+ +L Y + A Y + D E E Sbjct: 104 EVGLAILGPLRELDEVAYLRFASVYRAFESADDFEDEIAM 143 >UniRef50_C4V4U4 Putative uncharacterized protein n=2 Tax=Selenomonas RepID=C4V4U4_9FIRM Length = 94 Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Query: 672 RVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 + RR+ GYL R +N KQ E RVKH Sbjct: 59 KFERIRRITGYLVGTTDR-WNNAKQAEEHERVKH 91 >UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Bacteria RepID=A8LK99_DINSH Length = 765 Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 90/317 (28%), Gaps = 52/317 (16%) Query: 217 SHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY 276 + GG + + A + + P + + A Sbjct: 109 TMQQGGGIGYDFST-----IRPKGAAVKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGA 163 Query: 277 EVNTLHTANGQTPFVTFGFGLGTSWE-SRLIQESIL--RNRIAGLGKNRKT-AVFPKLVF 332 + T+ P + + R+ S+L + + + VF V+ Sbjct: 164 MMATM---RCDHPDIEAFIAAKSDPARLRMFNVSVLVTDAFMEAVKADGSWDLVFDGKVY 220 Query: 333 AIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE 392 + D+ ++ + P ++ D++ C + Sbjct: 221 HTVE---------ARDLWNKIMKATFEYAEPGVIFIDRINAANNLSY----CETIAAT-- 265 Query: 393 NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWK-LLDERLVLARKALMTRIARLEG 451 N GEQ + S+NL R+ + G+ A + L+E + A + + Sbjct: 266 NPCGEQPLPPYGACLLGSINLSRLISDPFGEGAALDEAALEELVATAVRMMD------NV 319 Query: 452 VKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNE 511 V A P+ + I LG G+ + + + G + +E Sbjct: 320 VDASRFPLEAQAAEARAKRR---------------IGLGVTGLADALL-MVGLRYG--SE 361 Query: 512 QLRAKGIAIVERLRQAV 528 + + R+ +A Sbjct: 362 AAARQTERWLHRIARAA 378 >UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPP8_9BACL Length = 574 Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 60/172 (34%), Gaps = 19/172 (11%) Query: 4 HVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE--- 60 V KRDG P ++I + R +AAE D + +AA V Q++ + +E Sbjct: 40 TVEKRDGRIEPLSLDKIFAFLRRGCEAAEGCDPE---RLAADVWPQLRDG--MRTSEIAR 94 Query: 61 --IQTAVENQLMSGPYKQL-------ARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNA 111 IQ AVE ++ P Q AY + +R G Q I L Sbjct: 95 VAIQAAVEKTSVAEPGWQFVAARLLLLDAYKQASRNRGYRHLGYGDFYQLIVELERIGRY 154 Query: 112 SLLNENANKDSKV--IPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHY 161 + ++ + + + + LL R ++ + G + Sbjct: 155 GTYIREHYSEDEIAELAAYIKPERDHLLNYVGLKQLLDRYAIRNLDNGIMEL 206 >UniRef50_Q64CV2 Ribonucleotide-triphosphate reductase n=1 Tax=uncultured archaeon GZfos1C11 RepID=Q64CV2_9ARCH Length = 63 Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 6/44 (13%), Positives = 19/44 (43%) Query: 581 VEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDV 624 ++ ++I + + PL +GG I + + + ++ + Sbjct: 3 PNADISLAERIKIKHIFFPLVDGGDIMHIFLGEGYPDPRGIKSL 46 >UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hydrogenothermaceae RepID=C1DWR9_SULAA Length = 1222 Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 10/148 (6%) Query: 1 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDA-DYCATVAAVVSEQMQGRNQVDIN 59 M V+KRDG F+ +++ +AI + E+ D + VA + ++ + V Sbjct: 1 MQRIVVKRDGSVEKFQMKKLVDAIFALLEGLELPDDYEIVFKVAKELDLKIPEK--VTTE 58 Query: 60 EIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENAN 119 E+ V + + + YI +D R+ +N+ I + Sbjct: 59 ELDYLVLKAI----EHLIPKNYI---YDTLATRQLLKIINRRIDRRFNSFKDYINYAVEE 111 Query: 120 KDSKVIPTQRDLLAGIVAKHYARQHLLP 147 K K Q D+ + Y+R + L Sbjct: 112 KLLKPELLQFDIDRLEKSIDYSRDYNLD 139 >UniRef50_C7RBJ3 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBJ3_KANKD Length = 81 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%) Query: 667 NHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKH 705 N D + V RV GY A FN GKQ E K R Sbjct: 41 NQDRQKCEVWTRVMGYHRPVSA--FNKGKQSEHKERQHF 77 >UniRef50_Q0AFT7 Transcriptional repressor nrdR n=29 Tax=Proteobacteria RepID=NRDR_NITEC Length = 160 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 2 TPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGR-NQVDINE 60 P ++K+ G +V F E++ + RA V A + ++ + + G ++ Sbjct: 48 FPQIIKQGGNRVEFNREKLYTSFARALHKRPVPVGQVDAAIERILQKLLGGGAQEISSRT 107 Query: 61 IQTAVENQLM---SGPYKQLARAYIEYRHD---RDIEREKRGRL 98 I V +L Y + A Y + +++ RE + Sbjct: 108 IGEWVMQELYKLDKVAYIRFASVYRSFEDVGDFQEVIREVQASP 151 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.131 0.351 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,799,374,196 Number of Sequences: 3077464 Number of extensions: 146107923 Number of successful extensions: 496117 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 320 Number of HSP's successfully gapped in prelim test: 270 Number of HSP's that attempted gapping in prelim test: 492987 Number of HSP's gapped (non-prelim): 900 length of query: 712 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 576 effective length of database: 621,861,252 effective search space: 358192081152 effective search space used: 358192081152 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 97 (42.0 bits)