Job Description P39176 Confidence 2.43% Date Thu Jan 5 11:58:22 GMT 2012 Rank 85 Aligned Residues 42 % Identity 24% Template c1bmv2_ PDB info PDB header:virus/rna Chain: 2: PDB Molecule:protein (icosahedral virus - b and c domain); PDBTitle: protein-rna interactions in an icosahedral virus at 3.02 angstroms resolution Resolution 3.00 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		I	P	Q	Q	L	I	L	P	D	T	V	R	K	G	I	V	V	N	V	A	E	M	R	L	Y	Y	Y	P	P	D	.	S	N	T	V	E	V	F	P	I	G	I	G	Q	A
Query Conservation																																.
Alig confidence															.											.						.
Template Conservation															.											.
Template Sequence		V	P	R	T	Y	C	V	L	N	P	Q	N	P	.	F	V	L	N	R	W	M	G	K	L	.	T	F	P	Q	G	T	S	R	S	V	K	R	M	P	L	S	I	G	G	G
Template Known Secondary structure								S	S	S			T	T	.											.				S	B	S									S			S	S
Template Predicted Secondary structure															.											.
Template SS confidence
		3178	.	3180	.	.	.	.	.	.	.	.	.	3190		.	.	.	.	.	.	.	.	.	3200		.	.	.	.	.	.	.	.	.	3210	.	.	.	.	.	.	.	.	.	3220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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