07/01/2012 02:40:23 : INFO  : Run start: Sat Jan  7 02:40:22 GMT 2012
07/01/2012 02:40:27 : INFO  : Initialised job
07/01/2012 02:40:29 : INFO  : Renaming log file 'phyre2_20120107_024021.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/a3bde3b0c6bec88a/phyre_20120107_024021.log'
07/01/2012 02:40:30 : INFO  : Initialised job:
Sequence
>batch____
MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGV
LLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDK
GPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSK
HGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLL
PENERVEFSAPSGQDGEISS

07/01/2012 02:40:30 : INFO  : Checked sequence
07/01/2012 02:40:33 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 02:40:34 : INFO  : PSI-BLAST 3 iterations
07/01/2012 02:42:36 : INFO  : PSI-BLAST 5 iterations
07/01/2012 02:44:48 : INFO  : Finished PSI-BLAST
07/01/2012 02:44:50 : INFO  : Running Buildali to generate a3m file
07/01/2012 02:59:41 : INFO  : Converting to HMM
07/01/2012 02:59:45 : INFO  : Calibrating HMM
07/01/2012 02:59:55 : INFO  : Searching HMM database
07/01/2012 03:04:41 : INFO  : Finished buildali
07/01/2012 03:04:44 : INFO  : Predicting secondary structure
07/01/2012 03:04:53 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 03:04:55 : INFO  : Predicting Disordered regions
07/01/2012 03:04:59 : INFO  : Predicted Disorder (Disopred)
07/01/2012 03:05:02 : INFO  : Running memsat_svm check
07/01/2012 03:07:23 : INFO  : Globular protein
07/01/2012 03:07:24 : INFO  : Predicted Transmembrane (memsat_svm) ID 'a3bde3b0c6bec88a'
07/01/2012 03:07:27 : INFO  : Initialising fold library search
07/01/2012 03:07:31 : INFO  : Initialised search input
07/01/2012 03:07:33 : INFO  : Building Ensemble models
07/01/2012 03:07:37 : INFO  : Building hh.d1v9ka_.model.1.pdb
07/01/2012 03:07:54 : INFO  : Building hh.c1v9fA_.model.2.pdb
07/01/2012 03:08:09 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a3bde3b0c6bec88a/hh.c1v9fA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a3bde3b0c6bec88a/c1v9fA_.1.pdb
07/01/2012 03:08:15 : INFO  : Building hh.d1v9fa_.model.3.pdb
07/01/2012 03:08:29 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a3bde3b0c6bec88a/hh.d1v9fa_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a3bde3b0c6bec88a/d1v9fa_.2.pdb
07/01/2012 03:08:35 : INFO  : Building hh.c1qyuA_.model.4.pdb
07/01/2012 03:08:48 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a3bde3b0c6bec88a/hh.c1qyuA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a3bde3b0c6bec88a/c1qyuA_.3.pdb
07/01/2012 03:08:53 : INFO  : Building hh.c2i82D_.model.5.pdb
07/01/2012 03:09:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a3bde3b0c6bec88a/hh.c2i82D_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a3bde3b0c6bec88a/c2i82D_.5.pdb
07/01/2012 03:09:13 : INFO  : Building c1v9fA_.1.pdb
07/01/2012 03:09:29 : INFO  : Building d1v9fa_.2.pdb
07/01/2012 03:09:47 : INFO  : Building c1qyuA_.3.pdb
07/01/2012 03:10:03 : INFO  : Building d1v9ka_.4.pdb
07/01/2012 03:10:20 : INFO  : Building c2i82D_.5.pdb
07/01/2012 03:10:38 : INFO  : Building c1vioA_.6.pdb
07/01/2012 03:10:54 : INFO  : Building c1kskA_.7.pdb
07/01/2012 03:11:14 : INFO  : Building c2omlA_.8.pdb
07/01/2012 03:11:30 : INFO  : Building c2olwB_.9.pdb
07/01/2012 03:11:46 : INFO  : Building c3dh3C_.10.pdb
07/01/2012 03:12:03 : INFO  : Building d1kska4.11.pdb
07/01/2012 03:12:21 : INFO  : Building d1vioa1.12.pdb
07/01/2012 03:12:36 : INFO  : Building c2gmlA_.13.pdb
07/01/2012 03:12:52 : INFO  : Building d1k8wa5.14.pdb
07/01/2012 03:13:05 : INFO  : Building d1sgva2.15.pdb
07/01/2012 03:13:21 : INFO  : Building d2apoa2.16.pdb
07/01/2012 03:13:34 : INFO  : Building d2ey4a2.17.pdb
07/01/2012 03:13:45 : INFO  : Building c2ey4A_.18.pdb
07/01/2012 03:14:00 : INFO  : Building d1r3ea2.19.pdb
07/01/2012 03:14:14 : INFO  : Building c3uaiA_.20.pdb
07/01/2012 03:15:49 : INFO  : Finished HH model building
07/01/2012 03:15:51 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
07/01/2012 03:17:00 : INFO  : html domain output complete ID 'a3bde3b0c6bec88a'
07/01/2012 03:50:34 : INFO  : Run end  : Sat Jan  7 03:50:33 GMT 2012
