Phyre 2 Results for P0AA41

Email | l.a.kelley@imperial.ac.uk
Description | P0AA41
Date | Thu Jan 5 11:11:52 GMT 2012
Unique Job ID | a3bde3b0c6bec88a

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1v9fA_ |
|  | 100.0 | 28 | PDB header:lyase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase d; PDBTitle: crystal structure of catalytic domain of pseudouridine2 synthase rlud from escherichia coli
2 | d1v9fa_ |
|  | 100.0 | 28 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase RsuA/RluD
3 | c1qyuA_ |
|  | 100.0 | 27 | PDB header:lyase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase d; PDBTitle: structure of the catalytic domain of 23s rrna pseudouridine2 synthase rlud
4 | d1v9ka_ |
|  | 100.0 | 34 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase RsuA/RluD
5 | c2i82D_ |
|  | 100.0 | 36 | PDB header:lyase/rna Chain: D: PDB Molecule:ribosomal large subunit pseudouridine synthase a; PDBTitle: crystal structure of pseudouridine synthase rlua: indirect2 sequence readout through protein-induced rna structure
6 | c1vioA_ |
|  | 100.0 | 21 | PDB header:lyase Chain: A: PDB Molecule:ribosomal small subunit pseudouridine synthase a; PDBTitle: crystal structure of pseudouridylate synthase
7 | c1kskA_ |
|  | 100.0 | 19 | PDB header:lyase Chain: A: PDB Molecule:ribosomal small subunit pseudouridine synthase a; PDBTitle: structure of rsua
8 | c2omlA_ |
|  | 100.0 | 19 | PDB header:isomerase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase e; PDBTitle: crystal structure of e. coli pseudouridine synthase rlue
9 | c2olwB_ |
|  | 100.0 | 19 | PDB header:isomerase Chain: B: PDB Molecule:ribosomal large subunit pseudouridine synthase e; PDBTitle: crystal structure of e. coli pseudouridine synthase rlue
10 | c3dh3C_ |
|  | 100.0 | 20 | PDB header:isomerase/rna Chain: C: PDB Molecule:ribosomal large subunit pseudouridine synthase f; PDBTitle: crystal structure of rluf in complex with a 22 nucleotide2 rna substrate
11 | d1kska4 |
|  | 100.0 | 18 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase RsuA/RluD
12 | d1vioa1 |
|  | 100.0 | 21 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase RsuA/RluD
13 | c2gmlA_ |
|  | 100.0 | 21 | PDB header:isomerase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase f; PDBTitle: crystal structure of catalytic domain of e.coli rluf
14 | d1k8wa5 |
|  | 97.7 | 20 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
15 | d1sgva2 |
|  | 97.6 | 27 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
16 | d2apoa2 |
|  | 97.5 | 22 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
17 | d2ey4a2 |
|  | 97.5 | 23 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
18 | c2ey4A_ |
|  | 97.4 | 23 | PDB header:isomerase/biosynthetic protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of a cbf5-nop10-gar1 complex
19 | d1r3ea2 |
|  | 97.4 | 20 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
20 | c3uaiA_ |
|  | 97.1 | 26 | PDB header:isomerase/chaperone Chain: A: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1-cbf5-nop10-gar1 complex from saccharomyces2 cerevisiae
21 | c2apoA_ |
| not modelled | 97.0 | 21 | PDB header:isomerase/rna binding protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of the methanococcus jannaschii cbf52 nop10 complex
22 | c1k8wA_ |
| not modelled | 97.0 | 20 | PDB header:lyase/rna Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: crystal structure of the e. coli pseudouridine synthase2 trub bound to a t stem-loop rna
23 | c1sgvA_ |
| not modelled | 96.6 | 27 | PDB header:lyase Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: structure of trna psi55 pseudouridine synthase (trub)
24 | c1ze2B_ |
| not modelled | 95.1 | 28 | PDB header:lyase/rna Chain: B: PDB Molecule:trna pseudouridine synthase b; PDBTitle: conformational change of pseudouridine 55 synthase upon its2 association with rna substrate
25 | c3n1tE_ |
| not modelled | 24.0 | 42 | PDB header:hydrolase Chain: E: PDB Molecule:hit-like protein hint; PDBTitle: crystal structure of the h101a mutant echint gmp complex
26 | d1rzya_ |
| not modelled | 22.8 | 25 | Fold:HIT-like Superfamily:HIT-like Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
27 | c2zodB_ |
| not modelled | 21.9 | 23 | PDB header:transferase Chain: B: PDB Molecule:selenide, water dikinase; PDBTitle: crystal structure of selenophosphate synthetase from2 aquifex aeolicus
28 | c3l7xA_ |
| not modelled | 21.4 | 33 | PDB header:cell cycle Chain: A: PDB Molecule:putative hit-like protein involved in cell-cycle PDBTitle: the crystal structure of smu.412c from streptococcus mutans ua159
29 | d1emsa1 |
| not modelled | 20.0 | 17 | Fold:HIT-like Superfamily:HIT-like Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
30 | c1mzwB_ |
| not modelled | 18.7 | 31 | PDB header:isomerase Chain: B: PDB Molecule:u4/u6 snrnp 60kda protein; PDBTitle: crystal structure of a u4/u6 snrnp complex between human2 spliceosomal cyclophilin h and a u4/u6-60k peptide
31 | d1kpfa_ |
| not modelled | 16.6 | 25 | Fold:HIT-like Superfamily:HIT-like Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
32 | d1fita_ |
| not modelled | 15.3 | 18 | Fold:HIT-like Superfamily:HIT-like Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
33 | c3o0mB_ |
| not modelled | 15.0 | 25 | PDB header:hydrolase Chain: B: PDB Molecule:hit family protein; PDBTitle: crystal structure of a zn-bound histidine triad family protein from2 mycobacterium smegmatis
34 | c1emsB_ |
| not modelled | 14.7 | 17 | PDB header:antitumor protein Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein; PDBTitle: crystal structure of the c. elegans nitfhit protein
35 | c2zauB_ |
| not modelled | 13.0 | 24 | PDB header:transferase Chain: B: PDB Molecule:selenide, water dikinase; PDBTitle: crystal structure of an n-terminally truncated2 selenophosphate synthetase from aquifex aeolicus
36 | d1guqa2 |
| not modelled | 12.2 | 25 | Fold:HIT-like Superfamily:HIT-like Family:Hexose-1-phosphate uridylyltransferase
37 | c3p0tB_ |
| not modelled | 12.0 | 33 | PDB header:unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an hit-like protein from mycobacterium2 paratuberculosis
38 | d1qwga_ |
| not modelled | 11.1 | 14 | Fold:TIM beta/alpha-barrel Superfamily:(2r)-phospho-3-sulfolactate synthase ComA Family:(2r)-phospho-3-sulfolactate synthase ComA
39 | d2oika1 |
| not modelled | 10.2 | 50 | Fold:HIT-like Superfamily:HIT-like Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
40 | c3lb5B_ |
| not modelled | 10.1 | 23 | PDB header:cell cycle Chain: B: PDB Molecule:hit-like protein involved in cell-cycle regulation; PDBTitle: crystal structure of hit-like protein involved in cell-cycle2 regulation from bartonella henselae with unknown ligand
41 | c2jv2A_ |
| not modelled | 10.0 | 7 | PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein ph1500; PDBTitle: solution structure of the n-terminal domain of ph1500
42 | d2aaaa1 |
| not modelled | 10.0 | 29 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain
43 | c1xquA_ |
| not modelled | 9.6 | 42 | PDB header:hydrolase Chain: A: PDB Molecule:hit family hydrolase; PDBTitle: hit family hydrolase from clostridium thermocellum cth-393
44 | d1xqua_ |
| not modelled | 9.6 | 42 | Fold:HIT-like Superfamily:HIT-like Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
45 | c3zrhA_ |
| not modelled | 9.4 | 31 | PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin thioesterase zranb1; PDBTitle: crystal structure of the lys29, lys33-linkage-specific trabid otu2 deubiquitinase domain reveals an ankyrin-repeat ubiquitin binding3 domain (ankubd)
46 | d1gr0a1 |
| not modelled | 9.3 | 21 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
47 | c2lf6A_ |
| not modelled | 9.2 | 24 | PDB header:signaling protein Chain: A: PDB Molecule:effector protein hopab1; PDBTitle: solution nmr structure of hopabpph1448_220_320 from pseudomonas2 syringae pv. phaseolicola str. 1448a, midwest center for structural3 genomics target apc40132.4 and northeast structural genomics4 consortium target pst3a
48 | d2zoda2 |
| not modelled | 8.4 | 17 | Fold:PurM C-terminal domain-like Superfamily:PurM C-terminal domain-like Family:PurM C-terminal domain-like
49 | d1vjpa1 |
| not modelled | 7.8 | 12 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
50 | c2do5A_ |
| not modelled | 7.8 | 35 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:splicing factor 3b subunit 2; PDBTitle: solution structure of the sap domain of human splicing2 factor 3b subunit 2
51 | c3ksvA_ |
| not modelled | 7.7 | 8 | PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: hypothetical protein from leishmania major
52 | c2oi2A_ |
| not modelled | 7.5 | 13 | PDB header:transferase Chain: A: PDB Molecule:mevalonate kinase; PDBTitle: streptococcus pneumoniae mevalonate kinase in complex with2 diphosphomevalonate
53 | c2eo4A_ |
| not modelled | 7.4 | 36 | PDB header:hydrolase Chain: A: PDB Molecule:150aa long hypothetical histidine triad nucleotide-binding PDBTitle: crystal structure of hypothetical histidine triad nucleotide-binding2 protein st2152 from sulfolobus tokodaii strain7
54 | c3oj7A_ |
| not modelled | 6.9 | 33 | PDB header:metal binding protein Chain: A: PDB Molecule:putative histidine triad family protein; PDBTitle: crystal structure of a histidine triad family protein from entamoeba2 histolytica, bound to sulfate
55 | d1k8ga2 |
| not modelled | 6.8 | 27 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB
56 | c2lkyA_ |
| not modelled | 6.8 | 33 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of msmeg_1053, the second duf3349 annotated protein2 in the genome of mycobacterium smegmatis, seattle structural genomics3 center for infectious disease target mysma.17112.b
57 | c1u83A_ |
| not modelled | 6.6 | 14 | PDB header:lyase Chain: A: PDB Molecule:phosphosulfolactate synthase; PDBTitle: psl synthase from bacillus subtilis
58 | d1u83a_ |
| not modelled | 6.6 | 14 | Fold:TIM beta/alpha-barrel Superfamily:(2r)-phospho-3-sulfolactate synthase ComA Family:(2r)-phospho-3-sulfolactate synthase ComA
59 | c3imiB_ |
| not modelled | 6.4 | 33 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hit family protein; PDBTitle: 2.01 angstrom resolution crystal structure of a hit family protein2 from bacillus anthracis str. 'ames ancestor'
60 | c3anoA_ |
| not modelled | 6.4 | 18 | PDB header:transferase Chain: A: PDB Molecule:ap-4-a phosphorylase; PDBTitle: crystal structure of a novel diadenosine 5',5'''-p1,p4-tetraphosphate2 phosphorylase from mycobacterium tuberculosis h37rv
61 | c1e0aB_ |
| not modelled | 6.4 | 28 | PDB header:signalling protein Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha; PDBTitle: cdc42 complexed with the gtpase binding domain of p212 activated kinase
62 | c2kvcA_ |
| not modelled | 6.4 | 31 | PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: solution structure of the mycobacterium tuberculosis protein rv0543c,2 a member of the duf3349 superfamily. seattle structural genomics3 center for infectious disease target mytud.17112.a
63 | d1u2ca2 |
| not modelled | 6.2 | 27 | Fold:Dystroglycan, domain 2 Superfamily:Dystroglycan, domain 2 Family:Dystroglycan, domain 2
64 | d1jb7a2 |
| not modelled | 6.1 | 27 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB
65 | d1w91a1 |
| not modelled | 6.1 | 36 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:Composite domain of glycosyl hydrolase families 5, 30, 39 and 51
66 | d2al1a1 |
| not modelled | 6.1 | 11 | Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:Enolase
67 | d2guya1 |
| not modelled | 6.0 | 27 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain
68 | c2odbB_ |
| not modelled | 6.0 | 31 | PDB header:protein binding Chain: B: PDB Molecule:serine/threonine-protein kinase pak 6; PDBTitle: the crystal structure of human cdc42 in complex with the crib domain2 of human p21-activated kinase 6 (pak6)
69 | c1u1iC_ |
| not modelled | 5.7 | 16 | PDB header:isomerase Chain: C: PDB Molecule:myo-inositol-1-phosphate synthase; PDBTitle: myo-inositol phosphate synthase mips from a. fulgidus
70 | d1z84a2 |
| not modelled | 5.4 | 17 | Fold:HIT-like Superfamily:HIT-like Family:Hexose-1-phosphate uridylyltransferase
71 | d2hx5a1 |
| not modelled | 5.1 | 14 | Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:4HBT-like