Phyre 2 alignment of P64548 with c1w0pA_

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Job Description | P64548
Confidence | 4.85% | Date | Thu Jan 5 12:09:21 GMT 2012
Rank | 37 | Aligned Residues | 23
% Identity | 30% | Template | c1w0pA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:sialidase; | PDBTitle: vibrio cholerae sialidase with alpha-2,6-sialyllactose
Resolution | 1.6 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | V | S | Y | T | R | W | P | A | L | S | G | P | P | K | L | C | I | F | S | S | S | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | V | S | Y | A | R | W | P | T | D | A | A | Q | N | G | D | R | I | K | P | W | M | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T |  |  | S | G | G | G |  |  |  | T | T | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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