08/01/2012 06:30:31 : INFO  : Run start: Sun Jan  8 06:30:30 GMT 2012
08/01/2012 06:30:36 : INFO  : Initialised job
08/01/2012 06:30:38 : INFO  : Renaming log file 'phyre2_20120108_063029.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/a2c3bcfe930de119/phyre_20120108_063029.log'
08/01/2012 06:30:42 : INFO  : Initialised job:
Sequence
>batch____
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHI
GNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTR
LLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGG
LPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSN
GPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDV
EKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGP
HDAAPLFDHFIELIEQYRKTAK

08/01/2012 06:30:44 : INFO  : Checked sequence
08/01/2012 06:30:47 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 06:30:50 : INFO  : PSI-BLAST 3 iterations
08/01/2012 06:32:54 : INFO  : PSI-BLAST 5 iterations
08/01/2012 06:35:36 : INFO  : Finished PSI-BLAST
08/01/2012 06:35:39 : INFO  : Running Buildali to generate a3m file
08/01/2012 06:48:08 : INFO  : Converting to HMM
08/01/2012 06:48:14 : INFO  : Calibrating HMM
08/01/2012 06:48:31 : INFO  : Searching HMM database
08/01/2012 06:55:04 : INFO  : Finished buildali
08/01/2012 06:55:05 : INFO  : Predicting secondary structure
08/01/2012 06:55:14 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 06:55:15 : INFO  : Predicting Disordered regions
08/01/2012 06:55:20 : INFO  : Predicted Disorder (Disopred)
08/01/2012 06:55:22 : INFO  : Running memsat_svm check
08/01/2012 07:01:58 : INFO  : Globular protein
08/01/2012 07:01:59 : INFO  : Predicted Transmembrane (memsat_svm) ID 'a2c3bcfe930de119'
08/01/2012 07:02:00 : INFO  : Initialising fold library search
08/01/2012 07:02:04 : INFO  : Initialised search input
08/01/2012 07:02:06 : INFO  : Building Ensemble models
08/01/2012 07:02:10 : INFO  : Building hh.c1keeH_.model.1.pdb
08/01/2012 07:02:27 : INFO  : Building c1keeH_.1.pdb
08/01/2012 07:02:45 : INFO  : Building d1a9xb1.2.pdb
08/01/2012 07:03:02 : INFO  : Building d1a9xb2.3.pdb
08/01/2012 07:03:19 : INFO  : Building c2ywcC_.4.pdb
08/01/2012 07:03:34 : INFO  : Building c1gpmD_.5.pdb
08/01/2012 07:03:49 : INFO  : Building c2vxoB_.6.pdb
08/01/2012 07:04:04 : INFO  : Building c3tqiB_.7.pdb
08/01/2012 07:04:19 : INFO  : Building d2a9va1.8.pdb
08/01/2012 07:04:34 : INFO  : Building d1gpma2.9.pdb
08/01/2012 07:04:48 : INFO  : Building d1wl8a1.10.pdb
08/01/2012 07:05:03 : INFO  : Building d1qdlb_.11.pdb
08/01/2012 07:05:19 : INFO  : Building c3r74B_.12.pdb
08/01/2012 07:05:35 : INFO  : Building d1i7qb_.13.pdb
08/01/2012 07:05:50 : INFO  : Building c2vpiA_.14.pdb
08/01/2012 07:06:05 : INFO  : Building c3uowB_.15.pdb
08/01/2012 07:06:21 : INFO  : Building c1vcnA_.16.pdb
08/01/2012 07:06:36 : INFO  : Building d1i1qb_.17.pdb
08/01/2012 07:06:51 : INFO  : Building c1jvnB_.18.pdb
08/01/2012 07:07:07 : INFO  : Building d1s1ma1.19.pdb
08/01/2012 07:07:23 : INFO  : Building d1vcoa1.20.pdb
08/01/2012 07:08:00 : INFO  : Finished HH model building
08/01/2012 07:08:02 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 07:08:54 : INFO  : html domain output complete ID 'a2c3bcfe930de119'
08/01/2012 07:59:22 : INFO  : Run end  : Sun Jan  8 07:59:21 GMT 2012
