Phyre 2 alignment of P0A6F1 with c3gndC_

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Job Description | P0A6F1
Confidence | 51.58% | Date | Thu Jan 5 11:02:59 GMT 2012
Rank | 240 | Aligned Residues | 55
% Identity | 15% | Template | c3gndC_
PDB info | PDB header:lyase | Chain: C: PDB Molecule:aldolase lsrf; | PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate
Resolution | 2.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |  | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | R | M | L | V | D | R | G | C | R | L | T | I | V | P | A | Q | . | T | S | A | E | D | V | L | K | M | N | P | D | G | I | F | L | S | N | G | P | G | D | P | A | P | C | D | Y | A | I | T | A | I | Q | K | F | L | E | T | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | R | I | A | A | E | M | G | A | Q | I | I | K | T | Y | Y | V | E | K | G | F | E | R | I | V | A | G | C | P | V | P | I | V | I | A | G | G | K | K | . | . | L | P | E | R | E | A | L | E | M | C | W | Q | A | I | D | Q | G
Template Known Secondary structure |  |  |  |  |  |  |  |  | T |  | S |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  | T |  | S | S |  |  |  |  |  |  |  | S |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |  |  | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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