Phyre 2 alignment of P42640 with d1txla_

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Job Description | P42640
Confidence | 10.21% | Date | Thu Jan 5 12:02:01 GMT 2012
Rank | 48 | Aligned Residues | 20
% Identity | 15% | Template | d1txla_
SCOP info | Lipocalins | Lipocalins | Hypothetical protein YodA
Resolution | 1.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 418 | . | 420 | . | . | . | . | . |  |  | . | . | . | . | 430 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | M | Y | F | A | D | H | G | . | . | L | E | R | D | P | T | K | K | N | V | Y | F
Query Conservation |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | I | Q | F | S | D | H | I | I | A | P | R | K | S | S | H | F | H | I | F | M | G
Template Known Secondary structure |  |  |  |  |  |  |  | S |  |  | S | S |  |  |  | S | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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