Phyre 2 alignment of P42640 with c3uoaB_

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Job Description | P42640
Confidence | 58.24% | Date | Thu Jan 5 12:02:01 GMT 2012
Rank | 37 | Aligned Residues | 33
% Identity | 21% | Template | c3uoaB_
PDB info | PDB header:hydrolase/hydrolase inhibitor | Chain: B: PDB Molecule:mucosa-associated lymphoid tissue lymphoma translocation | PDBTitle: crystal structure of the malt1 paracaspase (p21 form)
Resolution | 1.75 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 398 | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | Y | T | D | S | L | L | G | Q | V | F | E | L | L | K | D | R | R | A | S | V | M | Y | F | A | D | H | G | L | E | R | D | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | E | M | R | N | A | V | D | E | F | L | L | L | L | D | K | G | V | Y | G | L | L | Y | Y | A | G | H | G | Y | E | N | F | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  | T | T |  |  |  |  |  |  |  |  | S |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 389 | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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