Phyre 2 alignment of P42640 with c1w8xP_

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Job Description | P42640
Confidence | 5.90% | Date | Thu Jan 5 12:02:01 GMT 2012
Rank | 98 | Aligned Residues | 21
% Identity | 10% | Template | c1w8xP_
PDB info | PDB header:virus | Chain: P: PDB Molecule:protein p16; | PDBTitle: structural analysis of prd1
Resolution | 4.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | P | Y | L | C | A | F | A | F | L | S | L | L | F | L | A | V | I | I | K | Y | D
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Template Sequence |  | L | L | Y | W | V | G | G | G | L | V | L | I | L | I | W | L | W | F | R | N | R
Template Known Secondary structure |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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