Phyre 2 alignment of P42640 with c3e4cB_

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Job Description | P42640
Confidence | 9.15% | Date | Thu Jan 5 12:02:01 GMT 2012
Rank | 60 | Aligned Residues | 28
% Identity | 18% | Template | c3e4cB_
PDB info | PDB header:hydrolase | Chain: B: PDB Molecule:caspase-1; | PDBTitle: procaspase-1 zymogen domain crystal strucutre
Resolution | 2.05 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . |  |  | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | D | S | L | L | G | Q | V | F | E | L | L | K | . | . | D | R | R | A | S | V | M | Y | F | A | D | H | G | L | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | M | T | T | E | L | E | A | F | A | H | R | P | E | H | K | T | S | D | S | T | F | L | V | F | M | S | H | G | I | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | G |  | S |  |  |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 211 | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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