Phyre 2 alignment of P42640 with c3oaaO_

Return to main results | Retrieve Phyre Job Id

Job Description | P42640
Confidence | 9.34% | Date | Thu Jan 5 12:02:01 GMT 2012
Rank | 58 | Aligned Residues | 30
% Identity | 20% | Template | c3oaaO_
PDB info | PDB header:hydrolase/transport protein | Chain: O: PDB Molecule:atp synthase gamma chain; | PDBTitle: structure of the e.coli f1-atp synthase inhibited by subunit epsilon
Resolution | 3.26 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 397 | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | 420 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | H | Y | T | D | S | L | L | G | Q | V | F | E | L | L | K | D | R | R | . | . | . | . | . | . | . | . | . | . | . | . | A | S | V | M | Y | F | A | D | H | G | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | E | T | M | R | K | V | I | G | H | L | A | H | G | N | L | E | Y | K | H | P | Y | L | E | D | R | D | V | K | R | V | G | Y | L | V | V | S | T | D | R | G | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  | S | S |  | S |  |  |  |  | S |  |  |  |  |  |  |  |  |  | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions