Phyre 2 alignment of P0AG44 with c3bj4B_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AG44
Confidence | 2.11% | Date | Thu Jan 5 11:28:06 GMT 2012
Rank | 100 | Aligned Residues | 16
% Identity | 25% | Template | c3bj4B_
PDB info | PDB header:signaling protein | Chain: B: PDB Molecule:potassium voltage-gated channel subfamily kqt | PDBTitle: the kcnq1 (kv7.1) c-terminus, a multi-tiered scaffold for2 subunit assembly and protein interaction
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | H | R | Q | A | M | F | R | N | M | A | G | S | L | V | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | Q | R | L | A | L | I | T | D | M | L | H | Q | L | L | S
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 603 | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions