16/01/2012 05:03:04 : INFO  : Run start: Mon Jan 16 05:03:04 GMT 2012
16/01/2012 05:03:05 : INFO  : Initialised job
16/01/2012 05:03:05 : INFO  : Renaming log file 'phyre2_20120116_050304.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/a28d3a57cc86abdf/phyre_20120116_050304.log'
16/01/2012 05:03:05 : INFO  : Initialised job:
Sequence
>batch____
MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSV
ANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSE
KAEAAAE

16/01/2012 05:03:05 : INFO  : Checked sequence
16/01/2012 05:03:05 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 05:03:05 : INFO  : PSI-BLAST 3 iterations
16/01/2012 05:04:14 : INFO  : PSI-BLAST 5 iterations
16/01/2012 05:05:05 : INFO  : Finished PSI-BLAST
16/01/2012 05:05:05 : INFO  : Running Buildali to generate a3m file
16/01/2012 05:08:32 : INFO  : Converting to HMM
16/01/2012 05:08:32 : INFO  : Calibrating HMM
16/01/2012 05:08:35 : INFO  : Searching HMM database
16/01/2012 05:11:10 : INFO  : Finished buildali
16/01/2012 05:11:10 : INFO  : Predicting secondary structure
16/01/2012 05:11:11 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 05:11:11 : INFO  : Predicting Disordered regions
16/01/2012 05:11:11 : INFO  : Predicted Disorder (Disopred)
16/01/2012 05:11:11 : INFO  : Running memsat_svm check
16/01/2012 05:11:52 : INFO  : Globular protein
16/01/2012 05:11:52 : INFO  : Predicted Transmembrane (memsat_svm) ID 'a28d3a57cc86abdf'
16/01/2012 05:11:52 : INFO  : Initialising fold library search
16/01/2012 05:11:53 : INFO  : Initialised search input
16/01/2012 05:11:53 : INFO  : Building Ensemble models
16/01/2012 05:11:53 : INFO  : Building hh.d2qamn1.model.1.pdb
16/01/2012 05:11:54 : INFO  : Building d2qamn1.1.pdb
16/01/2012 05:11:54 : INFO  : Building c3bboP_.2.pdb
16/01/2012 05:11:55 : INFO  : Building d2zjrk1.3.pdb
16/01/2012 05:11:56 : INFO  : Building d1gd8a_.4.pdb
16/01/2012 05:11:56 : INFO  : Building d2cqma1.5.pdb
16/01/2012 05:11:57 : INFO  : Building c3h0dB_.6.pdb
16/01/2012 05:11:57 : INFO  : Building d1xd7a_.7.pdb
16/01/2012 05:11:57 : INFO  : Building d1o65a_.8.pdb
16/01/2012 05:11:58 : INFO  : Building c2op8A_.9.pdb
16/01/2012 05:11:58 : INFO  : Building c2z99A_.10.pdb
16/01/2012 05:11:58 : INFO  : Building c2ic6B_.11.pdb
16/01/2012 05:11:59 : INFO  : Building c1x4qA_.12.pdb
16/01/2012 05:11:59 : INFO  : Building d1v66a_.13.pdb
16/01/2012 05:11:59 : INFO  : Building d1otfa_.14.pdb
16/01/2012 05:11:59 : INFO  : Building d1bjpa_.15.pdb
16/01/2012 05:12:00 : INFO  : Building c3ry0A_.16.pdb
16/01/2012 05:12:00 : INFO  : Building c2qsgX_.17.pdb
16/01/2012 05:12:00 : INFO  : Building d2a7wa1.18.pdb
16/01/2012 05:12:01 : INFO  : Building c2x4kB_.19.pdb
16/01/2012 05:12:01 : INFO  : Building c2a7wF_.20.pdb
16/01/2012 05:12:03 : INFO  : Finished HH model building
16/01/2012 05:12:03 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 05:12:06 : INFO  : html domain output complete ID 'a28d3a57cc86abdf'
16/01/2012 05:13:23 : INFO  : Run end  : Mon Jan 16 05:13:23 GMT 2012
