Phyre 2 alignment of P0AG44 with c2hm8A_

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Job Description | P0AG44
Confidence | 2.30% | Date | Thu Jan 5 11:28:06 GMT 2012
Rank | 84 | Aligned Residues | 39
% Identity | 15% | Template | c2hm8A_
PDB info | PDB header:apoptosis | Chain: A: PDB Molecule:pdcd4 c-terminal ma-3 domain; | PDBTitle: solution structure of the c-terminal ma-3 domain of pdcd4
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | L | N | R | N | S | S | H | R | Q | A | M | F | R | N | M | A | G | S | L | V | R | H | E | I | I | K | T | T | L | P | K | A | K | E | L | R | R | V | V | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | E | S | T | G | E | S | A | F | K | M | I | L | D | L | L | K | S | L | W | K | S | S | . | T | I | T | I | D | Q | M | K | R | G | Y | E | R | I | Y | N
Template Known Secondary structure |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 372 | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . |  | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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