Phyre 2 alignment of P0AG44 with c2wb1Q_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AG44
Confidence | 2.12% | Date | Thu Jan 5 11:28:06 GMT 2012
Rank | 99 | Aligned Residues | 12
% Identity | 17% | Template | c2wb1Q_
PDB info | PDB header:transcription | Chain: Q: PDB Molecule:dna-directed rna polymerase rpo13 subunit; | PDBTitle: the complete structure of the archaeal 13-subunit dna-2 directed rna polymerase
Resolution | 3.52 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 77 | . | . | 80 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | K | L | F | N | E | L | G | P | R | F | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | R | L | F | E | D | N | Y | K | D | Y | E
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 65 | . | . | . | . | 70 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions