Phyre 2 alignment of P0AG44 with d2b0ga1

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Job Description | P0AG44
Confidence | 2.27% | Date | Thu Jan 5 11:28:06 GMT 2012
Rank | 89 | Aligned Residues | 34
% Identity | 24% | Template | d2b0ga1
SCOP info | Ferredoxin-like | RNA-binding domain, RBD | Canonical RBD
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | N | E | I | V | A | K | L | F | N | E | L | G | P | R | F | A | S | R | A | G | G | Y | T | R | I | L | K | C | G | F | R | A | G | D | N | A | P | M | A | Y | I | E | L | V | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |
Template Sequence |  | N | E | M | M | L | S | M | L | F | N | . | . | . | . | . | . | . | . | Q | F | P | G | F | K | E | V | R | L | V | P | N | R | H | D | . | . | . | . | I | A | F | V | E | F | T | T
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | T | S | T | T |  |  |  |  |  |  |  | T | T | T |  | S | . | . | . | . |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 21 | . | . | . | . | . | . | . | . | 30 |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |  |  |  |  | . | . | . | 50 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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