Phyre 2 alignment of P0AG44 with c2c36B_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AG44
Confidence | 3.06% | Date | Thu Jan 5 11:28:06 GMT 2012
Rank | 54 | Aligned Residues | 11
% Identity | 45% | Template | c2c36B_
PDB info | PDB header:viral protein | Chain: B: PDB Molecule:glycoprotein d hsv-1; | PDBTitle: structure of unliganded hsv gd reveals a mechanism for2 receptor-mediated activation of virus entry
Resolution | 2.11 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 91 | . | . | . | . | . | . | . | . | 100 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | G | G | Y | T | R | I | L | K | C | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | G | T | Y | L | R | L | V | K | I | N
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |
|  | 161 | . | . | . | . | . | . | . | . | 170 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions