20 c3csgA_ Probab=100.00  E-value=0  Score=309.06  Aligned_columns=357  Identities=18%

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCC
Q ss_conf             99999737880279999999999998779808999966946899999999968899889995720467888588635576
Q batch____        30 SIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKA  109 (430)
Q Consensus        30 ti~~~~~~~~~~~~~~~~~~i~~F~~~~p~i~V~~~~~~~~~~~~kl~~~~~ag~~pDi~~~~~~~~~~~~~~~~~~~~~  109 (430)
                      +|++|..  +++..+.+.+++++|||++ ||+|+++  +++++.+||.+++++|++|||+.++..++..++..|++.+++
T Consensus         1 ~l~vW~~--~~~~~~~~~e~~~~Fek~t-GIkV~~~--~~~d~~~kl~~~~asG~~PDI~~~~~~~~~~~~~~G~L~~L~   75 (458)
T c3csgA_           1 KLVIWIN--GDKGYNGLAEVGKKFEKDT-GIKVTVE--HPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT   75 (458)
T ss_dssp             CEEEECC--TTSCHHHHHHHHHHHHHHH-CCCEEEE--CCTTHHHHHHHHHTTTCSCSEEEEEHHHHHHHHHTTCBCCCC
T ss_pred             CEEEEEE--CCCHHHHHHHHHHHHHHCC-CCEEEEE--ECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCEECCC
T ss_conf             5899970--8535789999999872037-9689998--621079999999838999719998721278899789821378


Q ss_pred             HHHHHCCCCHHHCCHHHHHHHEECCCCEEEEEECCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             02220115656439787875342699269997326760134112025666098755787899999999841478844101
Q batch____       110 VATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIA  189 (430)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~t~de~~~~~~~~~~~~~~~~~~~  189 (430)
                      .....    .+++++..++.++++|+  +|++|+.....+++||+++|+    ++|+|||||.+++++++..+..+++..
T Consensus        76 ~~~~~----~d~~~~~~~~~~~~dGk--~YgiP~~~~~~~l~YNkdlf~----e~P~Twdel~~~a~klk~~g~~~~~~~  145 (458)
T c3csgA_          76 PDKAF----QDKLYPFTWDAVRYNGK--LIAYPIAVEALSLIYNKDLLP----NPPKTWEEIPALDKELKAKGKSALMFN  145 (458)
T ss_dssp             CCHHH----HTTBCHHHHHTTEETTE--ECSEEEEEECCEEEEETTTCS----SCCSBGGGHHHHHHHHHTTTCEEECCC
T ss_pred             CHHHH----HHHHHHHHHHHEEECCE--EEEEECCCCEEEEEEEHHHHC----CCCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             10435----65302565630778897--999752771479998066612----123688899999999885798306733


Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCC------CCCCCCHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHCCCCEE
Q ss_conf             46776520478999999614986244554------2155898999999999999961698888-7234776664446115
Q batch____       190 LPTAESVLTEQSFSQFALSNQANVFNAEG------KITLDTPEMMQALTYYRDLTANTMPGSN-DIMEVKDAFMNGTAPM  262 (430)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~l~~~~~l~~~~~~~~~-~~~~~~~~~~~g~~a~  262 (430)
                      ...      .+.+..++++.|+..+..++      +..+++|+.+++++++++|++++..... +++.....|.+|+++|
T Consensus       146 ~~~------~~~~~~~~~~~gg~~~~~~~~~~~~~~~~l~sp~~~~al~~~~~l~~~g~~~~~~~~~~~~~~F~~G~~am  219 (458)
T c3csgA_         146 LQE------PYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAM  219 (458)
T ss_dssp             TTC------HHHHHHHHHHTTCEEEEECSSSEEEEEEESSSHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHTTCEEE
T ss_pred             CCC------HHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEE
T ss_conf             642------05799999985642001268523456634389999999999999997089898889778989986497459


Q ss_pred             EEECHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHH-HHCCHHHHHHHHHHCCCCCCC
Q ss_conf             7305036898972368884788612567777620002333337788879899999999-983979999999623685234
Q batch____       263 AIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVT-FMEQADNIADWVMMSPGAALP  341 (430)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~A~~fi~-~l~s~e~~~~~~~~~~~g~~P  341 (430)
                      ++.|+|.+..+.+.+.+......| ...+.......+++.++|+++|+|+++|++||+ |+.+++.+..+...   +.+|
T Consensus       220 ~~~g~w~~~~~~~~~~~~~v~~~P-~~~g~~~~~~~g~~~~~I~~~SknkeaA~~Fl~~~~~s~e~~~~~~~~---~~~~  295 (458)
T c3csgA_         220 TINGPWAWSNIDTSKVNYGVTVLP-TFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKD---KPLG  295 (458)
T ss_dssp             EEECGGGHHHHHHHTCCEEEECCC-EETTEECCCEEEEEEEEEBTTCTTHHHHHHHHHHTTSSHHHHHHHHHH---SCCC
T ss_pred             EEECHHHHHHHHCCCCCCCEEECC-CCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHC---CCCC
T ss_conf             984503355674179861368713-568887741678788998289879899999999883998999999731---8988


Q ss_pred             CCHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             43242159664055113578999999997532211012235555553114889999999999998278998999999999
Q batch____       342 VNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQK  421 (430)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~al~~~~~  421 (430)
                      +.......+.+..++....+.+...              .............+...+..++++++.|++++++||+++|+
T Consensus       296 ~~~~~~~~~~~~~~p~~~~~~~~~~--------------~~~~~P~~p~~~~i~~~i~~al~~a~~G~~t~eeAL~dAq~  361 (458)
T c3csgA_         296 AVALKSYEEELAKDPRIAATMENAQ--------------KGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQT  361 (458)
T ss_dssp             EESBHHHHHHHTTSHHHHHHHHHHH--------------HSEECCCSTTHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHCCHHHHHHHHHHH--------------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             7421001114431832899999874--------------28346688448889999999999985035678999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q batch____       422 KLDE  425 (430)
Q Consensus       422 ~~~~  425 (430)
                      ++.+
T Consensus       362 ~v~~  365 (458)
T c3csgA_         362 RITK  365 (458)
T ss_dssp             HHHS
T ss_pred             HHHC
T ss_conf             8632