13 d1nj1a3 Probab=100.00  E-value=0  Score=372.10  Aligned_columns=257  Identities=18%

Q ss_pred             HHHHHHHCCCCCCCCHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH-HHHHCCCCCCCCHHE
Q ss_conf             8999987188145422331377301246989999999999999987312794587477413289-997607787880233
Q batch____       139 HVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQD-TLYGTGQLPKFAGDL  217 (430)
Q Consensus       139 H~~ig~~l~l~d~~~~~~~sG~g~~~l~~~~a~Le~al~~~~l~~~~~~~G~~~v~~P~~v~~~-~~~~~G~~~~~~~~~  217 (430)
                      +.+|..+.+|+|...++    +|+|+|+|.|+.+.++|++++.+..  +.||++|.+|.+++.+ +|+.|||+++|.++|
T Consensus         6 y~~l~~k~~lid~~~~v----~G~~~~lP~g~~l~~~l~~~~~~~~--~~g~~ev~~P~l~~~~~l~~~sg~~~~f~~~l   79 (265)
T d1nj1a3           6 FHNILEEAEIIDQRYPV----KGMHVWMPHGFMIRKNTLKILRRIL--DRDHEEVLFPLLVPEDELAKEAIHVKGFEDEV   79 (265)
T ss_dssp             HHHHHHHTTCEECCCSS----TTCCEECHHHHHHHHHHHHHHHHHH--TTTCEECCCCSEEEHHHHTTSHHHHHHTTTTC
T ss_pred             HHHHHHHCCCCHHCCCC----CCEEEECCHHHHHHHHHHHHHHHHH--HCCCEEEECCCEECHHHHHHCCCCCCCCCCCE
T ss_conf             99999843720002589----8237678679999999999999999--74980773453005888631137435531002


Q ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEEEECC--EEEE
Q ss_conf             89737775421001233325549999997158768745866584541431576544586443420000011112--7798
Q batch____       218 FHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVE--MVQI  295 (430)
Q Consensus       218 y~i~~~~~~~~~~~~~L~pTse~~~~~~~~~~~~~~~~LPlr~~~~~~~fR~E~~~~g~~~~GL~R~~qF~~~e--~~~~  295 (430)
                      |++.....+....+++|+||+|++++.+++++++++++||+|++++|+|||+|+    ++++||+|+|||++++  ..++
T Consensus        80 ~~~~~~~~d~~~~~~~L~pt~e~~~~~~~~~~~~s~~~LPl~l~q~~~~fR~E~----~~~~gl~R~reF~~~ed~~~~~  155 (265)
T d1nj1a3          80 YWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYET----KHTRPLIRVREITTFKEAHTIH  155 (265)
T ss_dssp             CEEEEETTEEEEEEEEECSSSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCCC----SCCBTTTBCSEEEEEEEEEEEE
T ss_pred             EEECCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCC----CCCCCEEEEEEEEEEEEEEEEE
T ss_conf             353157766566301341357189999997300687534279986774430467----8888516766314784337886


Q ss_pred             ECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCHHHCCCEEE
Q ss_conf             28679999999999999999997499889982376322676430699999706788548998832023022122297998
Q batch____       296 VRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCR  375 (430)
Q Consensus       296 ~~~e~s~~~~~~~~~~~~~i~~~L~l~~r~~~~~~~dl~~~~~~~~die~~~p~~~~~~Ev~s~s~~~d~~s~r~~i~y~  375 (430)
                      +++|++.++++.+++++..++++|||||+++..+++|+++++.+++|+|+|+| .++++|++||+++++++|++|+|+|.
T Consensus       156 ~~~e~~~~~~~~~l~~~~~i~~~lgl~~~~~~~~~~d~~~~~~~~~~~e~~~p-~~~~~e~~~~~~l~~~~s~~~~i~y~  234 (265)
T d1nj1a3         156 ATASEAEEQVERAVEIYKEFFNSLGIPYLITRRPPWDKFPGSEYTVAFDTLMP-DGKTLQIGTVHNLGQTFARTFEIKFE  234 (265)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCTTTSCTTCSEEEEEEEECT-TSCEEEEEEEEEEETHHHHHHTCEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECC-CCCEEEEEEEEECCCCCHHHCCCEEE
T ss_conf             49789999999999999999997199528876257877521112210012147-87605666665024222123471898


Q ss_pred             CCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCC
Q ss_conf             6899801002888613427999999998850689
Q batch____       376 SKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQA  409 (430)
Q Consensus       376 ~~~~~~~~~~~~~~gt~~~~~R~l~alle~~~~~  409 (430)
                      +++|+.+ ++|+ +..|++ +|+|+||||+|+|+
T Consensus       235 ~~dg~~~-~~~~-~~~G~~-~R~l~alle~~~dd  265 (265)
T d1nj1a3         235 TPEGDHE-YVHQ-TCYGLS-DRVIASVIAIHGDE  265 (265)
T ss_dssp             CTTSCEE-ECEE-EEEEEC-THHHHHHHHHTCCC
T ss_pred             CCCCCEE-EEEE-ECHHHH-HHHHHHHHHHHCCC
T ss_conf             7899885-5356-223389-99999999863689