Phyre 2 alignment of P76342 with d1jbja2

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Job Description | P76342
Confidence | 4.74% | Date | Thu Jan 5 12:22:01 GMT 2012
Rank | 42 | Aligned Residues | 32
% Identity | 16% | Template | d1jbja2
SCOP info | Immunoglobulin-like beta-sandwich | Immunoglobulin | I set domains
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | T | V | G | V | Y | G | K | A | L | P | P | Q | N | G | A | P | V | R | L | I | V | P | W | K | Y | G | F | K | G | I | K | S | I | V | S | I | K | L | T | R | E | R | P | P | T | T | W
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | K | W | E | K | N | G | Q | E | L | P | Q | K | H | D | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | K | H | L | V | L | Q | D | F | S | E | V | E | D | S | G | Y | Y
Template Known Secondary structure |  |  |  |  |  |  | T | T |  |  |  |  | S |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S |  |  |  |  |  | S |  |  | T | T | T | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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