34 c1s3sA_ Probab=96.93   E-value=0.035  Score=33.61  Aligned_columns=136  Identities=28%

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC
Q ss_conf             14379970899988999999999999779949998177117864411367754222212366565655637301046674
Q batch____        23 NRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAQAGTVSEKLLARLKNIGVNDWQPHANPVVVWDIFG  102 (500)
Q Consensus        23 ~rH~~I~G~TGSGKS~~~~~li~~l~~~~~~viiiDpkGEy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (500)
                      .+++++.|.+|+|||+.++.+..++   +.+++.+|                                            
T Consensus       216 ~~~~Ll~Gp~G~GKt~l~~~ia~~~---~~~~~~i~--------------------------------------------  248 (436)
T c1s3sA_         216 PRGILLYGPPGTGKTLIARAVANET---GAFFFLIN--------------------------------------------  248 (436)
T ss_dssp             CCEEEEECSTTSSHHHHHHHHHHHH---TCEEEEEE--------------------------------------------
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHC---CCCEEEEE--------------------------------------------
T ss_conf             7538986799899789999998744---99589973--------------------------------------------


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             33502554366767888864238997799999999999985187757889999999985554688899741106641999
Q batch____       103 EKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGA  182 (500)
Q Consensus       103 ~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  182 (500)
                                      ...........-+..+..++..+....                                     
T Consensus       249 ----------------~~~l~~~~~g~~e~~l~~~f~~a~~~~-------------------------------------  275 (436)
T c1s3sA_         249 ----------------GPEIMSKLAGESESNLRKAFEEAEKNA-------------------------------------  275 (436)
T ss_dssp             ----------------HHHHHTSCTTHHHHHHHHHHHHHHHTC-------------------------------------
T ss_pred             ----------------HHHHCCCCCCHHHHHHHHHHHHHHHCC-------------------------------------
T ss_conf             ----------------068700100158888999999997509-------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf             99999999721111103777888888630111478844998878776268899999999999999997514686667289
Q batch____       183 IQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLV  262 (500)
Q Consensus       183 l~~~l~~l~~~~~~~~~~~~~~~i~dll~~~~~~~~~i~iidls~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~v  262 (500)
                                                                                                   |.+
T Consensus       276 -----------------------------------------------------------------------------p~i  278 (436)
T c1s3sA_         276 -----------------------------------------------------------------------------PAI  278 (436)
T ss_dssp             -----------------------------------------------------------------------------SEE
T ss_pred             -----------------------------------------------------------------------------CCE
T ss_conf             -----------------------------------------------------------------------------948


Q ss_pred             EEEHHHHHHCCCCCHHHHHHHHHHHHHHHH--------CCEEEEEEECCHHHCCHHHH--HCCCCEEEEEEECCCHHHHH
Q ss_conf             987225662101326899999999999863--------59089999568334898897--12321357523138866799
Q batch____       263 FFFDEAHLLFNDAPQVLLDKIEQVIRLIRS--------KGVGVWFVSQNPSDIPDNVL--GQLGNRVQHALRAFTPKDQK  332 (500)
Q Consensus       263 iviDEAh~l~~~~~~~~~~~i~~iaregRk--------~GiglilaTQ~Psdi~~~iL--sQ~~~~I~~~lr~~~p~d~~  332 (500)
                      +++||.|.+++..+........++.....+        .++-++.+|.+|..||+.++  +-....|-  +..-+..++.
T Consensus       279 i~lDeid~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vi~tt~~~~~l~~~l~r~~rf~~~i~--~~~P~~~~R~  356 (436)
T c1s3sA_         279 IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD--IGIPDATGRL  356 (436)
T ss_dssp             EEEETGGGTCCCSSSCCCTTHHHHHHHHHHHHHHCCGGGCEEEEEEESCGGGSCGGGTSTTSSCEEEE--CCCCCHHHHH
T ss_pred             EEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHCCHHHHCCCCCEEEEE--CCCCCHHHHH
T ss_conf             98400003210257887458899999998643022246987999844895888824204240303666--7898999999


Q ss_pred             HHHHH
Q ss_conf             99998
Q batch____       333 AVKAA  337 (500)
Q Consensus       333 ~v~~~  337 (500)
                      .+.+.
T Consensus       357 ~Il~~  361 (436)
T c1s3sA_         357 EILQI  361 (436)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99999