BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (614 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P33353 Putative uncharacterized protein yehQ n=61 Tax=r... 1257 0.0 UniRef50_D1T1K3 Zinc finger SWIM domain protein n=1 Tax=Acidovor... 277 1e-72 UniRef50_Q396D9 Putative uncharacterized protein n=1 Tax=Burkhol... 228 4e-58 UniRef50_B1M3T8 Zinc finger SWIM domain protein n=2 Tax=Rhizobia... 187 1e-45 UniRef50_C3JM87 Swim zinc finger domain protein n=2 Tax=Rhodococ... 143 2e-32 UniRef50_C6WE89 Zinc finger SWIM domain protein n=1 Tax=Actinosy... 136 2e-30 UniRef50_A4X8W9 Putative uncharacterized protein n=1 Tax=Salinis... 135 4e-30 UniRef50_Q2SH06 Transposase and inactivated derivatives n=1 Tax=... 121 1e-25 UniRef50_Q8F862 Putative uncharacterized protein n=2 Tax=Leptosp... 96 3e-18 UniRef50_D1S2D8 Zinc finger SWIM domain protein n=1 Tax=Micromon... 82 5e-14 UniRef50_C0R172 Zinc finger SIM domain protein n=1 Tax=Brachyspi... 62 9e-08 UniRef50_C6JNG6 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 58 1e-06 UniRef50_C1QFN1 SWIM zinc finger-containing protein n=1 Tax=Brac... 51 1e-04 UniRef50_D0SME1 Predicted protein n=1 Tax=Acinetobacter junii SH... 47 0.002 UniRef50_C5D1M8 Zinc finger SWIM domain protein n=1 Tax=Variovor... 45 0.007 UniRef50_B4ESP7 Putative uncharacterized protein n=7 Tax=Enterob... 43 0.033 >UniRef50_P33353 Putative uncharacterized protein yehQ n=61 Tax=root RepID=YEHQ_ECOLI Length = 614 Score = 1257 bits (3252), Expect = 0.0, Method: Compositional matrix adjust. Identities = 614/614 (100%), Positives = 614/614 (100%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLA 60 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLA Sbjct: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLA 60 Query: 61 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT 120 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT Sbjct: 61 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT 120 Query: 121 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA Sbjct: 121 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 Query: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP 240 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP Sbjct: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP 240 Query: 241 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL 300 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL Sbjct: 241 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL 300 Query: 301 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT 360 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT Sbjct: 301 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT 360 Query: 361 DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR 420 DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR Sbjct: 361 DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR 420 Query: 421 NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS 480 NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS Sbjct: 421 NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS 480 Query: 481 LGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVS 540 LGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVS Sbjct: 481 LGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVS 540 Query: 541 FVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLH 600 FVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLH Sbjct: 541 FVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLH 600 Query: 601 NGWRYQEQSAIGQA 614 NGWRYQEQSAIGQA Sbjct: 601 NGWRYQEQSAIGQA 614 >UniRef50_D1T1K3 Zinc finger SWIM domain protein n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T1K3_9BURK Length = 730 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 216/672 (32%), Positives = 321/672 (47%), Gaps = 76/672 (11%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA-LIATFSDGVRTQLANGQ 63 R +LLELT +ALTAL+NAGFVKR+ K++ G +P ++ E D ++A F+DG RT+L G+ Sbjct: 7 RADLLELTAEALTALANAGFVKRAQKDVAAGLLPRLATEADGTVVAEFADGARTRLPPGR 66 Query: 64 ALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEE-------------------- 103 L++A C+C A+GMCRHRVMLVL+YQ+ A + + Sbjct: 67 TLRDAACTCAASGMCRHRVMLVLAYQQDHARNAAPGAGDGSDSGGDAEAAVAAPAPAAEG 126 Query: 104 -WDPAIWLEEL--ATLPDATRKRAQALVAKG--ITIELFCAPGEIPSARLPMSDVRFYSR 158 W PA + + A++ + ++A L A + ++ + +P P+ARLPM VRF+SR Sbjct: 127 PWSPAHFDDAAVAASIAPSVLEQAARLAASRPVVAVQPWQSPSVPPAARLPMCTVRFFSR 186 Query: 159 SSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEG 218 SS+ ARCDC +G+ C HVV+A+ AF A E + E D P A+ E Sbjct: 187 SSLVHARCDCQQGSGCAHVVVALWAFRAA----GELAPGGDEAMVEVAPRGDAPPAAPES 242 Query: 219 NA--------------------CRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETC 258 R+ + +L LWL G SQP + A F A+ Sbjct: 243 GGPAPVAAAPPPGRLRAPQALQLREALDELLLALWLEGTSQPPMALAARFGAVRAQAQAL 302 Query: 259 NWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVP-- 316 WRWV + L +L + + AR+S + L A L +R A D+ G+ P Sbjct: 303 GWRWVDDGLAELSLLLQSQQARSSRDDPARTLQVAAELWARPRAAAHA--EDASGQPPGT 360 Query: 317 ---PVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRS 373 P+ V+G G+ GE LDHL+LVSLG W D G + F DPDT ++ L R Sbjct: 361 TRPPLHASQVLGIGVKGEVALDHLKLVSLGAALWADDAAEGASVLFADPDTQTVTVLERQ 420 Query: 374 WPRSEQENSPA-ATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPD 432 WPR E A + RR+ F +A GQ++++ A R A+G + + + R + V+PLSP Sbjct: 421 WPRGEGGPGQALSGRRVAGFPLRQVAAGQVITKTATRRANGAIDIGSGARQTGVMPLSPT 480 Query: 433 AWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVD----------NLFILPVAECISLG 482 AW L APLRQ + +L E LR PP ++P ++ P Sbjct: 481 AWDDLGAPLRQGSVESLVERLRNAPPEFVQPRQAATGAAGGTSGPLHVVAFPGMHADECT 540 Query: 483 WDSSRQTLDAQVI--------SGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCL 534 WD++ Q L A+++ + + L L+LP A+AP AV+ +A L + Sbjct: 541 WDAAAQVLHARIVRRDGDGDGAADAASAALHLALPHRAAAPGAVDALARTLSGEWGSLRA 600 Query: 535 VSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQAL 594 V+G + +G+ ++P ++T RA E L + P LL Sbjct: 601 VAGPAALHQGRAVMQPLALLTDQRAVVPQIEAPAAQALALRTASETPQGVQALLGATSQW 660 Query: 595 LIQLLHNGWRYQ 606 L Q L G R+Q Sbjct: 661 LAQWLRQGLRHQ 672 >UniRef50_Q396D9 Putative uncharacterized protein n=1 Tax=Burkholderia sp. 383 RepID=Q396D9_BURS3 Length = 744 Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 171/499 (34%), Positives = 246/499 (49%), Gaps = 33/499 (6%) Query: 144 PSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMR- 202 P ARLPM VRF+SR S+ ARCDC +G+ C HVV+AV AF +A A + I ++R Sbjct: 200 PVARLPMCTVRFFSRRSLAHARCDCRQGSGCAHVVVAVWAFRQAGAPADGVSEAIVEVRP 259 Query: 203 --SEHVTSSDD--PFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETC 258 + S DD P + +A + L LWL G SQP I A Sbjct: 260 PAGDEGESDDDRSPLRDDAAHALIADLDTLVHALWLDGSSQPPIALAARVESLRGRLRER 319 Query: 259 NWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAAL-NSRLNCAQEMARRDSIGEVPP 317 W+WV ++L + V A HAR+S + + LA L +RD Sbjct: 320 GWQWVDDALDEAWQLVHAQHARSSRFEPLRLVRVLAELWARLRAARSAATQRDGAA---- 375 Query: 318 VPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRS 377 VP R ++G G+ GE +LDHLRLVSLG+ W D G + F DPDT +++ L+R+WPR+ Sbjct: 376 VPARQMLGIGVKGEVELDHLRLVSLGVELWADDAEEGASVLFADPDTQTVMVLTRNWPRA 435 Query: 378 EQENSPA-----ATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPD 432 + A RR+ F +A GQ+V++ AKR A+G + +A R + V+PLSP Sbjct: 436 ADVAAGGRAPDLAGRRVAGFPLRQIAAGQVVTKTAKRRANGAVDIAAGVRQTGVLPLSPK 495 Query: 433 AWQMLSAPLRQPGIVALREYLRQRPPACIRP--------LNQVDNLFILPVAECI--SLG 482 +W L+AP+RQPGI AL +LR P +RP +L ++ + S+ Sbjct: 496 SWDDLAAPIRQPGIAALVAHLRDALPDFVRPRQAANGAAAGAAGSLHVVAFEPMVVRSVH 555 Query: 483 WDSSRQTLDAQV------ISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVS 536 WD++ Q L A++ + G ++VL L+LP A AP AV+ +A L + ++ Sbjct: 556 WDAAAQVLHARLAQGEAGAADAGGEDVLHLALPHRAVAPGAVDALARALSGEWGALRALA 615 Query: 537 GFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVL-PVPSTAHQLLIRCQALL 595 G V G + P ++T RA L E PLP A P P+ L ALL Sbjct: 616 GTVRLHAGTAVMRPLAVLTAQRAVVLQTEAAAPQPLPLAGGREPSPALV-ALAEDTLALL 674 Query: 596 IQLLHNGWRYQEQSAIGQA 614 + L G R+Q A+ +A Sbjct: 675 AEWLRQGMRHQGGGAVERA 693 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 56/105 (53%), Positives = 76/105 (72%), Gaps = 4/105 (3%) Query: 4 LRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-ATFSDGVRTQLANG 62 +R +LLELTP+ALTAL+NAGFVKR+ K++ G +P ++ + D + A+F DGVRT L G Sbjct: 5 MRDDLLELTPEALTALANAGFVKRAQKDVAAGALPALAVDGDGTVHASFDDGVRTSLPPG 64 Query: 63 QALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPA 107 + L++A CSC A+GMCRHRVMLVL+YQ A Q+ E + D A Sbjct: 65 RTLRDAACSCTASGMCRHRVMLVLAYQ---ANMQANEAVDATDSA 106 >UniRef50_B1M3T8 Zinc finger SWIM domain protein n=2 Tax=Rhizobiales RepID=B1M3T8_METRJ Length = 658 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 184/612 (30%), Positives = 266/612 (43%), Gaps = 80/612 (13%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-ATFSDGVRTQLANGQ 63 RP+L LT L L+NAG VKR+L+E+ G P ++ D + A F+DG T+L G+ Sbjct: 3 RPDLRALTDDGLIQLANAGLVKRALREVAAGAGPALAEAGDGTVEARFADGTVTRLGPGR 62 Query: 64 ALKEAQCSCGANGMCRHRVMLVLSYQRLCA-----------TTQSTEKEEE-------WD 105 A C+C A+GMCRHRV LV++Y+ A T ++ E+ WD Sbjct: 63 PPDAATCTCPASGMCRHRVALVVAYRAAVADGPVEGAAEGPTEETAERTAVPAAAAVAWD 122 Query: 106 PAIWLEELATLPDAT---------RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFY 156 P TL AT + L+A GIT+ L G +P+ARLP + VRF Sbjct: 123 PG-------TLDGATVEAGLGGAAAAELRRLLAGGITVGLER--GAVPAARLPTATVRFL 173 Query: 157 SRSSIRFARCDCIEGTLCEHVVLAVQAFVE-AKAQQAEFNHLIWQMRSEHVTSSDDPFAS 215 ++ +ARCDC G C HV LA++AF E A A + + + T ++D A Sbjct: 174 VPDAVGYARCDCAAGGGCAHVALAIRAFREAAGAPEIRLGGAVPARTATAATPAEDGLA- 232 Query: 216 EEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVD 275 A + V L L G +S P H +AA R +AAE V + +L + Sbjct: 233 ---EAADRVVAGL---LEAGVVSGPEAH-DAALVRLRRAAERRGATQVLLAEAELTDQLA 285 Query: 276 AFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLD 335 A+ R + Y+A L A L R+ +G G E + Sbjct: 286 AYAGRHAAYDAAVVLALAAELLGRVRGGA-----------------VALGLGQPYETAMG 328 Query: 336 HLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAAT--RRLFS-- 391 RLVSLG R R+ D DTG++L L R++ E E A RL S Sbjct: 329 KTRLVSLGARFLARGRGAAARVALADTDTGALLALERAFAPGEAEADVVAGLPGRLLSPG 388 Query: 392 FQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALRE 451 GQI++ A+R ADG L L R + + L DA L APL + ++ Sbjct: 389 LSVAGTGQGQILTSVARRRADGLLALGQGARGRTAL-LPRDARVRLPAPLAARDVSSVLR 447 Query: 452 YLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPAS 511 L RPPA +RP ++++ + V + W QT A V E L L+ Sbjct: 448 RLADRPPAFLRPRDRLEAFHVFAVEAVLGQAWAPGAQTWQAAVELPE-AGGTLHLARAYD 506 Query: 512 ASAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAP 571 +AP+A++ +A PV V+G V +G L +P W++ A+ V Sbjct: 507 PAAPHALDALAGACSGRWGPVRQVAGPVRIEDGALVCDP---------WSVSADRLVVPD 557 Query: 572 L--PSASVLPVP 581 L P + P+P Sbjct: 558 LAAPDGAGHPIP 569 >UniRef50_C3JM87 Swim zinc finger domain protein n=2 Tax=Rhodococcus erythropolis RepID=C3JM87_RHOER Length = 644 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 137/525 (26%), Positives = 230/525 (43%), Gaps = 38/525 (7%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQA 64 RP+L LT AL ++N G VKR+ + PE+ ++ ++ + DGV T L G Sbjct: 7 RPDLAALTDDALALVANRGLVKRAARMFAE-ETPELLVTSERILVRYGDGVETSLPAGIP 65 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEEL--ATLPDATRK 122 EA C+CGA+ +CRHRV LVL Y+ A S+ +W P + +E A L A Sbjct: 66 FSEASCTCGASSVCRHRVGLVLVYR---ANHGSSFDHIDWTPGEFDDEALEAFLGGAVLA 122 Query: 123 RAQALVAKGITIELFCAPGEIPSAR--LPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 RA +G + A G P R LP VRF + A T E + LA Sbjct: 123 RANRTRLQGYQATVHRARGTDPVVRVELPHCTVRFLVPHELSHAHSSASAHTTAEAIALA 182 Query: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP 240 V A A + H+ RS V +D + L++T+ + G+S Sbjct: 183 VWAVRAADESGTDHVHV---GRSSVVRDADRS----------ALARALARTILVDGLSTT 229 Query: 241 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL 300 A R + E + W++++ +L ++A+ R + ++ +A +++R+ Sbjct: 230 TAVQHATAVRDTRTIEAGSAIWLADACIELTDQIEAYSMRHAGHSRTRVAMIIAEIHARV 289 Query: 301 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT 360 + V TV+G+ GE L RL+SLG R + I+F Sbjct: 290 ELGE---------SVDSSLAGTVLGTETPGETPLRRSRLISLGARVTATGDSTTADIYFA 340 Query: 361 DPDTGSILHLSRSWPRSEQE---NSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLL 417 +PD+ ++ +S W E +TRR+ ALA +++++A R A+ + L Sbjct: 341 EPDSDAVFLMSHDWSSESDEALSGYAISTRRIAGSTVAALASSTVLTESAVRRANHRIRL 400 Query: 418 ATRN-RLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVA 476 + +S++PL DAW+ S + R ++ +RPP+ R D + ++ + Sbjct: 401 GRKGIGRTSILPLGVDAWEK-SIDVVDDYAEMHRRFI-ERPPSFARARLTTDGVGVMRID 458 Query: 477 ECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERM 521 IS + + Q +V G+G N+ +S+ A AP A++ M Sbjct: 459 SVISTDYAPAEQIWTMRV--GDGRGNLAQVSVVHRAQAPGAIDAM 501 >UniRef50_C6WE89 Zinc finger SWIM domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WE89_ACTMD Length = 637 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 160/561 (28%), Positives = 249/561 (44%), Gaps = 39/561 (6%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEND-ALIATFSDGVRTQLANGQ 63 R +LL LT +AL L+N G VKR+ +E+E G PE+ +D A+ F DGV L G Sbjct: 3 RADLLALTSEALVDLANRGLVKRATREVEAGAGPELGVADDGAVTGVFPDGVTAVLPPGA 62 Query: 64 ALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIW--LEELATLPDATR 121 L A CSCGA G CRHR+ +VL+YQR + E E W P E +A + Sbjct: 63 GLDAASCSCGARGACRHRIAVVLAYQREHGGAEE-EVFEPWSPGSVPDAELVAAFGERAV 121 Query: 122 KRAQALVAKGITIELFCAPGEIP--SARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVL 179 A+ ++ G+ + L A P A LP + VRF + +A D + V L Sbjct: 122 AAARRVLRSGVPVVLRRASAGDPVAVAELPSATVRFLVPGELGYASTDAAALRRDQLVAL 181 Query: 180 AVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGI-S 238 AV AF EA Q + +R + S+ + + + + ++ Q L G + + Sbjct: 182 AVLAFREADEQ----GFVDPVVRFDAGGSAGPGGSGDGPDPLAEALELTGQLLREGAVHT 237 Query: 239 QPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNS 298 P++ +AA R+ + W + ++ +L + A+ AR + + + ++A L Sbjct: 238 GPVL--DAALERSRRDLTAAGMHWPAAAVGELAEQLAAYRARGARHR----VERVAEL-- 289 Query: 299 RLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIW 358 A+ AR + G P TV+G A E + +RL SLG R E ++ Sbjct: 290 ---VAEVRARARATG-----PRSTVLGFDEAAETPMRRVRLTSLGCRVTGTGEDRTAEVF 341 Query: 359 FTDPDTGSILHLSRSWPRSEQENSPA---ATRRLFSFQAGALAGGQIVSQAAKRSADGEL 415 F D D +L L W E + RRL ALA +VS++A RS + Sbjct: 342 FADGD--GVLVLRHRWQLGADERPTGHDLSGRRLSGTTLAALAAANVVSESAVRSPSRVV 399 Query: 416 -LLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILP 474 L A+R +SV PL AW L AP+ + A L PP +R + +++ ++ Sbjct: 400 RLTASRVAKTSVTPLG-SAWTGLRAPVLVRDLAAAGAELAALPPRVVRARVEAEHVRVVE 458 Query: 475 VAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCL 534 VA S+G+D Q L+A V G ++ + ++ A A T Sbjct: 459 VAAVRSIGYDPGAQRLEAVVADAAGTTALVRATYRSTTPAALDALARALAAGPTH----- 513 Query: 535 VSGFVSFVEGQLTLEPRVMMT 555 VSG +S G+L + P ++T Sbjct: 514 VSGALSRTGGRLVITPFAVLT 534 >UniRef50_A4X8W9 Putative uncharacterized protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4X8W9_SALTO Length = 674 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 152/578 (26%), Positives = 239/578 (41%), Gaps = 59/578 (10%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQA 64 R +LL LTP +L AL+N G VKR+ KEL+ I + + TF DG L G Sbjct: 9 RGDLLALTPDSLAALTNRGLVKRATKELDQAAPAVIVDGDGTVRGTFPDGTAASLPRG-G 67 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQR----------------------LCATTQSTEKEE 102 L CSC A +CRH V L+L+YQR A + Sbjct: 68 LDAGACSCDATTICRHLVGLILAYQRQHTAAGLLADPGPQPRSPIDVPSAAPPNTGTGPA 127 Query: 103 EWDPAIWLEELAT------LPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFY 156 W P + +E T L A R+ +A + P +P+ L + VRF Sbjct: 128 AWSPGSFTDEQLTSRVGARLMAAARRVERAGYLARVRRPTSTDP--VPTVELGSATVRFL 185 Query: 157 SRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASE 216 + F D + T + + LAV AF A E + ++R E ++D Sbjct: 186 VPHDLGFVHTDAVADTRDDVLALAVWAFRVAD----ERAPGLAEVRVEVGGPAND---DG 238 Query: 217 EGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAA----ETCNWRWVSESLRQLRA 272 G+ + + L G + H A+ + RW +L L Sbjct: 239 SGSGIEATLLLADRVLRDGAV-----HVGTGIAAAVAEQQQALDAVGLRWPLLALGDLAD 293 Query: 273 SVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEA 332 + A+ R++ Y LA L L+ A+ A + G + + V+G+ A E Sbjct: 294 HLTAYRERSARYRP----DTLAGLILELH-ARHRAVCNGGGSLRAL----VLGTDEAAET 344 Query: 333 KLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSF 392 L +RL SLG R + + I+ +T ++L L RSW E + + A RR+ Sbjct: 345 PLRQVRLDSLGCRVSAVGQQRTVEIFHAHAETATVLVLRRSW-EGEADGAALARRRIAGT 403 Query: 393 QAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREY 452 ALA G +V+++A RSA + LAT + V S W L L I AL Sbjct: 404 TVDALATGNVVTESAVRSASRTVRLATSRLAQTTVNPSQGHWDALPKALVVRDIGALGVE 463 Query: 453 LRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASA 512 L PP +RP + + + ++ VA+ +++ + +Q LDA ++ G +T + + Sbjct: 464 LDALPPRMVRPRIEAELVRVVTVADVLTVNYSPGQQRLDAVIVDAHGTRATVTAT--HTV 521 Query: 513 SAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEP 550 +AP ++ +AA L + V VSG V G + ++P Sbjct: 522 AAPGRLDAVAAALNGKNGRVRYVSGIVHRSAGAVVIDP 559 >UniRef50_Q2SH06 Transposase and inactivated derivatives n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SH06_HAHCH Length = 661 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 156/633 (24%), Positives = 252/633 (39%), Gaps = 59/633 (9%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPE-----ISHENDA--LIATFSD 53 M R +LL +T Q L SN G VKR+ KELE + + E+DA L A + D Sbjct: 1 MTMRRDDLLSMTLQDLEGYSNRGTVKRAQKELEKLSAERDADQTLLSEDDAGNLAAHWPD 60 Query: 54 GVRTQLANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEEL 113 G TQL +A + +C+C + CRH + LVL+YQ + A + W+P +EL Sbjct: 61 GAITQLGANEAFPQGRCTCPSTTTCRHLITLVLAYQEMRAEAAESPVPVAWNPGDISDEL 120 Query: 114 ---ATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIE 170 A P RK A +G+ EL + + VRF + R+ + D E Sbjct: 121 MAKAYTPAQIRK-ANKWFQEGVLAELALSEKPLAIIETIGVAVRFLAPGDPRYVQSDGDE 179 Query: 171 GTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQ 230 V A F L + +V++ P E Q V L Sbjct: 180 EL----------TAVAAIIAILAFRRLPQGQTAGYVSTCPRPPVEPE---ALQSVGDLFV 226 Query: 231 TLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECL 290 L GG+SQ RA + + +W W + +L +D ++ R ++ + + Sbjct: 227 RLLQGGLSQLEPGLRDKLRRAARRLQAHDWLWPASHCERLVEQIDRYNRRDGSFSPSQAI 286 Query: 291 HQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIA-GEAKLDHLRLVSLGMRCWQD 349 + R +R P P V G G + R + LG C Sbjct: 287 RHMGEFLCR--------QRALASPTLPAPEVVVRGGGPKRARERTGKSRYIGLG--CRMR 336 Query: 350 IEHYGL--RIWFTDPDTGSILHLSRSWPRSEQENSPAA----TRRLFSFQAGA--LAGGQ 401 ++H G+ ++ DTG+++ L + S+ E++P + +RL+ Q GQ Sbjct: 337 VDHGGVFAEVFLQSVDTGALVILEKRQKTSKDEDAPLSYYQIAQRLYVLQHSIRDYGKGQ 396 Query: 402 IVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACI 461 +++ AK S D + T R +++ P S W L L L L R Sbjct: 397 VLTSGAKLSLDNRM---TFGRQTALNPQSYQ-WSTLRQNLLMEDFDELLRRLASRLAGPF 452 Query: 462 RPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERM 521 R L +N + L VA + +D++ Q + A ++ +G + L+ P S E + Sbjct: 453 RSLKANENFYALKVAGVANPRFDTASQCVTADLVDAKGAR--MALAFPYSTRGAGGAEAL 510 Query: 522 AALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAE--------TTPVA-PL 572 LL+ + V+G V+ L +EP ++ A+ + TPVA L Sbjct: 511 LQLLRMHGSHISYVAGSVTEHTHGLMIEPVSVVYSVNQQAMMLQPYVDDSLPGTPVAHAL 570 Query: 573 PSASVLPVPSTA-HQLLIRCQALLIQLLHNGWR 604 P+ + + TA +LL + LL +L G R Sbjct: 571 PAENRFALARTALSRLLEQVDQLLCDILITGLR 603 >UniRef50_Q8F862 Putative uncharacterized protein n=2 Tax=Leptospira interrogans RepID=Q8F862_LEPIN Length = 644 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 127/562 (22%), Positives = 246/562 (43%), Gaps = 59/562 (10%) Query: 4 LRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-ATFSDGVRTQLANG 62 +R ++L L+ Q L L++ G V R+LK++E+G + D + + D V L Sbjct: 1 MRQDILSLSLQELEVLTSKGTVNRALKDIESGAKGKWKETEDGNVEVVWEDSVICVLPGS 60 Query: 63 QALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDP-AIWLEELATLPDATR 121 ++E+ C+C + G+CRH + +++YQ+ S + W+P +I E L + A+ Sbjct: 61 VPIQESSCTCSSTGVCRHIIRTIVAYQK---RNISDKPNLSWNPGSISDESLHSFISASS 117 Query: 122 -KRAQALVAKGITIELFCAPGEIPSARL-PMSDVRFYSRSSIRFARCDCIEGTLCEHVV- 178 +A+++ GI +EL ++P A++ + V F + IR+AR DC +G+L E ++ Sbjct: 118 FTKAKSIFNSGIAVEL--DRTDVPVAKIHGLGTVHFPVPNDIRYARADC-KGSLGEQIIA 174 Query: 179 LAVQAFVEAKAQQAEFNHLIWQMR-SEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGI 237 +AV +F ++ + I +++ S H+T + E QY Q G+ Sbjct: 175 IAVWSFRLTHLKKEFVSTNIREIKISSHITDRANTILKE----IIQYGFQ--------GV 222 Query: 238 SQPLIHYEAAFNRALQAAETC---NWRWVSESLRQLRASVDAFHARASHYNAGECLHQLA 294 S+ L +R Q +C W SE L +L+ + S ++ + ++ L Sbjct: 223 SEHLK------DRLFQLKRSCLEEGLLWPSEILSELQEEYSKYLLHDSLFDPDQVVYLLG 276 Query: 295 ALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYG 354 R++ A +++ G +P + + G ++L L+ LG + + Sbjct: 277 EWIIRMD-----ALKENKGAIPSL---VISGDTKTYSSELIVRSLIGLGSGIKVLQKGFV 328 Query: 355 LRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGA----LAGGQIVSQAAKRS 410 + +F DP + IL S+ + +E P + F+ G IVS + K++ Sbjct: 329 VLSYFADPKSDKILLYECSFEKHTEE--PFHSIGNFTVFKGIPLHNFGKSSIVSSSIKKT 386 Query: 411 ADGELLLATRNRLSSVVPLSPDA--WQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVD 468 G+L + S+ + L+P ++ LS + + L ++PP + P Sbjct: 387 TSGKL------QFSNKLTLNPQTFFFESLSENILSNNFNETIKLLLEKPPRPLGPRWAAG 440 Query: 469 NLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQT 528 N F+ V +D+ Q ++ ++ G N+ + LP A +E + L Sbjct: 441 NFFVFKVERFTQPHFDNILQQINIELEDQNG--NIAYVQLPYYTRASDGIENLKHAL--G 496 Query: 529 DDPVCLVSGFVSFVEGQLTLEP 550 D + V G + G+L ++P Sbjct: 497 DSHLRYVCGVANVASGRLYIKP 518 >UniRef50_D1S2D8 Zinc finger SWIM domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S2D8_9ACTO Length = 709 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 1/105 (0%) Query: 4 LRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-ATFSDGVRTQLANG 62 +R +L+ LTP L ALSN G VKR+ KE++ G P ++ + D + A + DGV L G Sbjct: 2 IRDDLIALTPDVLAALSNRGLVKRATKEVDAGERPALTEDADGAVRAAYPDGVAVTLPVG 61 Query: 63 QALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPA 107 L CSC A G+CRH + +VL+YQR A E + + A Sbjct: 62 GGLAAGICSCPAPGVCRHLLAVVLTYQRTHADAPDREATPDGEAA 106 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 96/370 (25%), Positives = 147/370 (39%), Gaps = 26/370 (7%) Query: 143 IPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMR 202 +P LP VRF I +AR D + E + LAV A A + + Q+R Sbjct: 205 VPRVELPTGTVRFLVPRQIGYARGDAAD-DGGEAIALAVWACRAADREHPDRQEA--QVR 261 Query: 203 -SEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWR 261 T ++ P + + L G + AA R L AA R Sbjct: 262 VGGTATVTERPALDAAVALAADVLLTGAAHLGSG-----VDARLAATRRDLDAA---GLR 313 Query: 262 WVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWR 321 W ++ L ++A+ AR + Y E L A+ ARR ++ P Sbjct: 314 WPLLAVEDLAGQLEAYAARGARYRP-ETFADL--------LAELPARRRAVVNAGATPVE 364 Query: 322 TVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQEN 381 V+G+ E L +RL LG R G+ + P S+L L R++P ++ + Sbjct: 365 RVLGTHEPAETPLRRVRLTGLGARVRCSGGEVGVDVVLAHPAAVSVLVLRRAYPVTD-DG 423 Query: 382 SPA----ATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQML 437 P A RR+ GALA G +VS++A RSA L +A + V W L Sbjct: 424 PPTGHELAGRRVTGTTLGALATGNVVSESAVRSAAHRLRIAAGRLARTTVTPGAGEWSGL 483 Query: 438 SAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISG 497 L AL L RPP +RP +++ +L + E ++G+ + Q L A V Sbjct: 484 PPGLLARDPDALAAELAGRPPRLLRPRTAAESVRVLALGEVRAIGYAAGEQRLHATVTGA 543 Query: 498 EGEDNVLTLS 507 +G +T + Sbjct: 544 DGGTATVTAT 553 >UniRef50_C0R172 Zinc finger SIM domain protein n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R172_BRAHW Length = 563 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 40/224 (17%) Query: 19 LSNAGFVKRSLKELEN--GNVPE---ISHENDALIATFSDGVRTQ-LANGQALKEAQCSC 72 ++N G RS+K+++N N PE I D + T G + + + N + +K ++CSC Sbjct: 1 MTNKGIYNRSVKDIDNIINNSPEKIKIEETEDKIKVTIDTGEKIEVILNDEDIKSSKCSC 60 Query: 73 GANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPA--------------------IWLEE 112 + +C+H +M +L + L T++ E E D A I +E Sbjct: 61 PSKDICKHIIMSLLYIEHL--DTENKENESNTDTAENNTEIEIKEENNTFDEVKNISYDE 118 Query: 113 LATLPDATRKRAQ-ALVAKGITIELFCAPGEIPSARLPMSDVRFY--SRSSIRFARCDCI 169 + L +T+K + AL IE + +P +V Y + SI+ A C C Sbjct: 119 IKKL--STKKNFEYALDRLDDNIEADIEEKAMLEINIPEENVIIYFPKKDSIKKAVCSCK 176 Query: 170 EGTLCEHVVLAV-------QAFVEAKAQQAEFNHLIWQMRSEHV 206 + +LC H ++A+ + E K E + I + E + Sbjct: 177 DSSLCAHKIIAILKYKQMYNSLEEIKEDDKEIDENILKFSKEFI 220 >UniRef50_C6JNG6 Predicted protein n=2 Tax=Fusobacterium RepID=C6JNG6_FUSVA Length = 563 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 107/564 (18%), Positives = 228/564 (40%), Gaps = 96/564 (17%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENG--NVPEISHENDALIATFSDGVRTQ 58 +N ++P L + + + ++SN G KRS+K+LE N+ +S ++ +I + V + Sbjct: 8 INEIKPFLPFINEEFIVSISNKGIYKRSIKDLEKARENIL-LSVKDTGIIEVKIEDVVVE 66 Query: 59 LANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAI-------WLE 111 L +++++C+C A+ +C+H VM +L + + Q+ E++E + + E Sbjct: 67 L--NVNIQKSRCTCPASSICKHIVMALLYLKEFYDSNQNEEEKEIEEDKEEKIDEINFYE 124 Query: 112 ELATLP-----DATRKRAQALVAKGITI--ELFCAPGEIPSARLPMSDVRFY--SRSSIR 162 EL L + K+ V I I E G++ + + + + Y SI Sbjct: 125 ELKKLTGDKILEIVGKKTYNSVINSIFIRNEAIFEYGDMLTVTIASQNAKVYFPKEKSIE 184 Query: 163 FARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFAS-EEGNAC 221 A C C E +C H + A+ +++ ++ +T D + + E G Sbjct: 185 NAMCSCKEKGICSHKIYALISYL---------------IKEGKITEEDTEYETIEIGEKE 229 Query: 222 RQYVQQLS---QTLWLGG--------ISQPLIHYEAAFNRALQAAETCNWRWVSESLRQL 270 ++ ++ L +++ G ISQ Y + L A+ ++ L+ L Sbjct: 230 KEIIENLHIFISSIFDRGISGLTGNEISQAEKFYIQIYGIKLFAS--------ADELKNL 281 Query: 271 RASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAG 330 + + + ++ ++ +H L ++ +R + + +D+ ++ V R Sbjct: 282 SSELGFYFSKNISFSNKRLMHILCSIYNRTSAL--LIVKDNRKKIMLVGQRQ------EE 333 Query: 331 EAKLDHLRLVSL----GMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAAT 386 + LD++ L+ L G+ D+ + +F D SIL +S P ENS Sbjct: 334 KFNLDNIELIGLGASGGITKRNDL---LITAYFYCKDINSILSMSTLRP---YENSS--- 384 Query: 387 RRLFSFQAGALAG-GQIVSQ--AAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQ 443 Q L GQ+ S + K + +++L + + + + + Sbjct: 385 ------QISTLYNMGQVWSNELSFKEVSVSKMILKDAKLSTGKISSAKSTICNIKGKTTE 438 Query: 444 PGI--VALREY------LRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVI 495 I +A+ +Y LR+ P + N+F++ E ++ +D Q L V+ Sbjct: 439 EDINELAVSDYSLIITELRKHKFRYFEPYSATKNIFLIKAEEIKNIEYDKIEQKLKFDVL 498 Query: 496 SGEGEDNVLTLSLPASASAPYAVE 519 G N + + ++ + A++ Sbjct: 499 DSNG--NTIVFDIKYNSVSENAIK 520 >UniRef50_C1QFN1 SWIM zinc finger-containing protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QFN1_9SPIR Length = 597 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/222 (20%), Positives = 87/222 (39%), Gaps = 53/222 (23%) Query: 11 LTPQALTALSNAGFVKRSLKELEN--GNVPE---ISHENDALIATFSDGVRTQ-LANGQA 64 + L L+N G RS+K+++N N PE I +N+ + T G + + + N + Sbjct: 12 INETFLLTLTNKGIYNRSVKDIDNIINNTPEKIKIEEDNNKIKVTIDTGEKIEVILNDED 71 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEK------------------------ 100 +K ++C+C + +C+H +M +L + L ++ + Sbjct: 72 IKSSKCTCPSKDICKHIIMSLLYIEHLDTENKADDDIENNNENNNENNNENNNKETKEKN 131 Query: 101 ----EEEWDPA--IWLEELATLP---------DATRKRAQALVAKGITIELFCAPGEIPS 145 +D I +E+ L D + +A + + +E+ P E Sbjct: 132 NDITNNTFDEVKNISFDEIRKLSTKINFEYALDRFYENIEAEINENAMLEI-NIPEENTI 190 Query: 146 ARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEA 187 P D SI+ A C C + +LC H ++A+ + E Sbjct: 191 IYFPKKD-------SIKKAVCSCKDSSLCAHKIIAILKYKET 225 >UniRef50_D0SME1 Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SME1_ACIJU Length = 710 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Query: 15 ALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEAQCSCGA 74 +L +N G V+R+LK++E G + + E I SDG + L++ L A CSC A Sbjct: 14 SLVTYANTGLVRRALKDIEAGKII-LQTEQSEHITIESDGQQVGLSSA-GLVNASCSCPA 71 Query: 75 NGMCRHRVMLVLSYQR 90 G C+H V VL Q+ Sbjct: 72 TGACKHIVAAVLYLQQ 87 >UniRef50_C5D1M8 Zinc finger SWIM domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5D1M8_VARPS Length = 689 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 16 LTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEAQCSCGAN 75 L L+N G ++R+ K++E G + +A + T +DG R QL + + ++A+C C A Sbjct: 15 LATLANPGLLRRAAKDVEAGKIAWAEQGTEAGVVT-ADGQRVQL-DARGPQQARCDCPAP 72 Query: 76 GMCRH 80 G+C+H Sbjct: 73 GICKH 77 >UniRef50_B4ESP7 Putative uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=B4ESP7_PROMH Length = 691 Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Query: 15 ALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEAQCSCGA 74 ALT +NAG ++R+ K+++N V DA FS + + + +++A C C A Sbjct: 14 ALTVFANAGLLRRARKDVDNEKVSV----TDANTGQFSSDGQKVVLHEAGIQQASCDCSA 69 Query: 75 NGMCRHRVMLVLSYQ 89 G C+H + +L Q Sbjct: 70 AGCCKHILAAILWLQ 84 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P33353 Putative uncharacterized protein yehQ n=61 Tax=r... 725 0.0 UniRef50_Q2SH06 Transposase and inactivated derivatives n=1 Tax=... 510 e-143 UniRef50_Q396D9 Putative uncharacterized protein n=1 Tax=Burkhol... 496 e-138 UniRef50_D1T1K3 Zinc finger SWIM domain protein n=1 Tax=Acidovor... 479 e-133 UniRef50_Q8F862 Putative uncharacterized protein n=2 Tax=Leptosp... 441 e-122 UniRef50_A4X8W9 Putative uncharacterized protein n=1 Tax=Salinis... 430 e-119 UniRef50_C3JM87 Swim zinc finger domain protein n=2 Tax=Rhodococ... 418 e-115 UniRef50_B1M3T8 Zinc finger SWIM domain protein n=2 Tax=Rhizobia... 365 2e-99 UniRef50_C6WE89 Zinc finger SWIM domain protein n=1 Tax=Actinosy... 363 9e-99 UniRef50_C6JNG6 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 358 5e-97 UniRef50_D1S2D8 Zinc finger SWIM domain protein n=1 Tax=Micromon... 289 3e-76 UniRef50_C0R172 Zinc finger SIM domain protein n=1 Tax=Brachyspi... 178 5e-43 UniRef50_C1QFN1 SWIM zinc finger-containing protein n=1 Tax=Brac... 167 1e-39 UniRef50_D0SME1 Predicted protein n=1 Tax=Acinetobacter junii SH... 134 8e-30 Sequences not found previously or not previously below threshold: UniRef50_C0ZD36 Putative uncharacterized protein n=1 Tax=Breviba... 141 1e-31 UniRef50_C6PZX2 Zinc finger SWIM domain protein n=1 Tax=Clostrid... 133 2e-29 UniRef50_B3ZDJ9 Zinc finger, swim domain protein n=7 Tax=Bacillu... 125 5e-27 UniRef50_C5D1M8 Zinc finger SWIM domain protein n=1 Tax=Variovor... 113 2e-23 UniRef50_B4ESP7 Putative uncharacterized protein n=7 Tax=Enterob... 103 2e-20 UniRef50_D0KDG6 Zinc finger SWIM domain protein n=2 Tax=Pectobac... 100 2e-19 UniRef50_A6LX16 Zinc finger, SWIM domain protein n=1 Tax=Clostri... 94 2e-17 UniRef50_A7BS04 Putative uncharacterized protein n=1 Tax=Beggiat... 49 7e-04 UniRef50_C5CI01 Zinc finger SWIM domain protein n=1 Tax=Kosmotog... 48 0.001 UniRef50_A1SR73 SNF2-related protein n=2 Tax=Psychromonas RepID=... 47 0.002 UniRef50_Q8TTH1 Predicted protein n=4 Tax=Methanosarcina RepID=Q... 47 0.002 UniRef50_D1KAQ9 Putative uncharacterized protein n=1 Tax=uncultu... 47 0.002 UniRef50_UPI0001745294 hypothetical protein VspiD_03835 n=1 Tax=... 46 0.004 UniRef50_Q5V1X9 Putative uncharacterized protein n=1 Tax=Haloarc... 46 0.004 UniRef50_C2ALD5 DNA/RNA helicase, superfamily II, SNF2 family n=... 45 0.012 >UniRef50_P33353 Putative uncharacterized protein yehQ n=61 Tax=root RepID=YEHQ_ECOLI Length = 614 Score = 725 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 614/614 (100%), Positives = 614/614 (100%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLA 60 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLA Sbjct: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLA 60 Query: 61 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT 120 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT Sbjct: 61 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT 120 Query: 121 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA Sbjct: 121 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 Query: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP 240 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP Sbjct: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP 240 Query: 241 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL 300 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL Sbjct: 241 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL 300 Query: 301 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT 360 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT Sbjct: 301 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT 360 Query: 361 DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR 420 DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR Sbjct: 361 DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR 420 Query: 421 NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS 480 NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS Sbjct: 421 NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS 480 Query: 481 LGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVS 540 LGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVS Sbjct: 481 LGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVS 540 Query: 541 FVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLH 600 FVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLH Sbjct: 541 FVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLH 600 Query: 601 NGWRYQEQSAIGQA 614 NGWRYQEQSAIGQA Sbjct: 601 NGWRYQEQSAIGQA 614 >UniRef50_Q2SH06 Transposase and inactivated derivatives n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SH06_HAHCH Length = 661 Score = 510 bits (1312), Expect = e-143, Method: Composition-based stats. Identities = 153/639 (23%), Positives = 248/639 (38%), Gaps = 53/639 (8%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPE-----ISHENDA--LIATFSD 53 M R +LL +T Q L SN G VKR+ KELE + + E+DA L A + D Sbjct: 1 MTMRRDDLLSMTLQDLEGYSNRGTVKRAQKELEKLSAERDADQTLLSEDDAGNLAAHWPD 60 Query: 54 GVRTQLANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEEL 113 G TQL +A + +C+C + CRH + LVL+YQ + A + W+P +EL Sbjct: 61 GAITQLGANEAFPQGRCTCPSTTTCRHLITLVLAYQEMRAEAAESPVPVAWNPGDISDEL 120 Query: 114 --ATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEG 171 A ++A +G+ EL + + VRF + R+ + D E Sbjct: 121 MAKAYTPAQIRKANKWFQEGVLAELALSEKPLAIIETIGVAVRFLAPGDPRYVQSDGDEE 180 Query: 172 TLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQT 231 V A F L + +V++ P E Q V L Sbjct: 181 ----------LTAVAAIIAILAFRRLPQGQTAGYVSTCPRPPVEPE---ALQSVGDLFVR 227 Query: 232 LWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLH 291 L GG+SQ RA + + +W W + +L +D ++ R ++ + + Sbjct: 228 LLQGGLSQLEPGLRDKLRRAARRLQAHDWLWPASHCERLVEQIDRYNRRDGSFSPSQAIR 287 Query: 292 QLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIA-GEAKLDHLRLVSLGMRCWQDI 350 + R +R P P V G G + R + LG R D Sbjct: 288 HMGEFLCR--------QRALASPTLPAPEVVVRGGGPKRARERTGKSRYIGLGCRMRVDH 339 Query: 351 EHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAA----TRRLFSFQAGA--LAGGQIVS 404 ++ DTG+++ L + S+ E++P + +RL+ Q GQ+++ Sbjct: 340 GGVFAEVFLQSVDTGALVILEKRQKTSKDEDAPLSYYQIAQRLYVLQHSIRDYGKGQVLT 399 Query: 405 QAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPL 464 AK S D + T R +++ P S W L L L L R R L Sbjct: 400 SGAKLSLDNRM---TFGRQTALNPQSYQ-WSTLRQNLLMEDFDELLRRLASRLAGPFRSL 455 Query: 465 NQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAAL 524 +N + L VA + +D++ Q + A ++ +G + L+ P S E + L Sbjct: 456 KANENFYALKVAGVANPRFDTASQCVTADLVDAKGAR--MALAFPYSTRGAGGAEALLQL 513 Query: 525 LQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAE--------TTPVA-PLPSA 575 L+ + V+G V+ L +EP ++ A+ + TPVA LP+ Sbjct: 514 LRMHGSHISYVAGSVTEHTHGLMIEPVSVVYSVNQQAMMLQPYVDDSLPGTPVAHALPAE 573 Query: 576 SVLPVPSTA-HQLLIRCQALLIQLLHNGWRYQEQSAIGQ 613 + + TA +LL + LL +L G R Q Sbjct: 574 NRFALARTALSRLLEQVDQLLCDILITGLRRASPGVQSQ 612 >UniRef50_Q396D9 Putative uncharacterized protein n=1 Tax=Burkholderia sp. 383 RepID=Q396D9_BURS3 Length = 744 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 226/692 (32%), Positives = 334/692 (48%), Gaps = 84/692 (12%) Query: 4 LRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-ATFSDGVRTQLANG 62 +R +LLELTP+ALTAL+NAGFVKR+ K++ G +P ++ + D + A+F DGVRT L G Sbjct: 5 MRDDLLELTPEALTALANAGFVKRAQKDVAAGALPALAVDGDGTVHASFDDGVRTSLPPG 64 Query: 63 QALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEE----------WDPAIWLEE 112 + L++A CSC A+GMCRHRVMLVL+YQ ++ + + +P +E Sbjct: 65 RTLRDAACSCTASGMCRHRVMLVLAYQANMQANEAVDATDSADVRAGGDGKTEPVDTRDE 124 Query: 113 LA------------------------------------------TLPDATRKRAQALVAK 130 A + + ++A + A Sbjct: 125 AARNPNDVARDGPDFAPPDDDTSGTSSADRAWSPADFDDAALAASFAPSVLEQAVRMAAA 184 Query: 131 G--ITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAK 188 + ++ + P ARLPM VRF+SR S+ ARCDC +G+ C HVV+AV AF +A Sbjct: 185 RPVVAVQPWAGAQGSPVARLPMCTVRFFSRRSLAHARCDCRQGSGCAHVVVAVWAFRQAG 244 Query: 189 AQQAEFNHLIWQMR---SEHVTSSDD--PFASEEGNACRQYVQQLSQTLWLGGISQPLIH 243 A + I ++R + S DD P + +A + L LWL G SQP I Sbjct: 245 APADGVSEAIVEVRPPAGDEGESDDDRSPLRDDAAHALIADLDTLVHALWLDGSSQPPIA 304 Query: 244 YEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCA 303 A W+WV ++L + V A HAR+S + + LA L +RL A Sbjct: 305 LAARVESLRGRLRERGWQWVDDALDEAWQLVHAQHARSSRFEPLRLVRVLAELWARLRAA 364 Query: 304 QEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPD 363 + A + VP R ++G G+ GE +LDHLRLVSLG+ W D G + F DPD Sbjct: 365 RSAATQRDGA---AVPARQMLGIGVKGEVELDHLRLVSLGVELWADDAEEGASVLFADPD 421 Query: 364 TGSILHLSRSWPRSEQENSPA-----ATRRLFSFQAGALAGGQIVSQAAKRSADGELLLA 418 T +++ L+R+WPR+ + A RR+ F +A GQ+V++ AKR A+G + +A Sbjct: 422 TQTVMVLTRNWPRAADVAAGGRAPDLAGRRVAGFPLRQIAAGQVVTKTAKRRANGAVDIA 481 Query: 419 TRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVD---------- 468 R + V+PLSP +W L+AP+RQPGI AL +LR P +RP + Sbjct: 482 AGVRQTGVLPLSPKSWDDLAAPIRQPGIAALVAHLRDALPDFVRPRQAANGAAAGAAGSL 541 Query: 469 NLFILPVAECISLGWDSSRQTLDAQVI------SGEGEDNVLTLSLPASASAPYAVERMA 522 ++ S+ WD++ Q L A++ + G ++VL L+LP A AP AV+ +A Sbjct: 542 HVVAFEPMVVRSVHWDAAAQVLHARLAQGEAGAADAGGEDVLHLALPHRAVAPGAVDALA 601 Query: 523 ALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPS 582 L + ++G V G + P ++T RA L E PLP A Sbjct: 602 RALSGEWGALRALAGTVRLHAGTAVMRPLAVLTAQRAVVLQTEAAAPQPLPLAGGREPSP 661 Query: 583 TAHQLLIRCQALLIQLLHNGWRYQEQSAIGQA 614 L ALL + L G R+Q A+ +A Sbjct: 662 ALVALAEDTLALLAEWLRQGMRHQGGGAVERA 693 >UniRef50_D1T1K3 Zinc finger SWIM domain protein n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T1K3_9BURK Length = 730 Score = 479 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 214/678 (31%), Positives = 318/678 (46%), Gaps = 72/678 (10%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA-LIATFSDGVRTQLANGQ 63 R +LLELT +ALTAL+NAGFVKR+ K++ G +P ++ E D ++A F+DG RT+L G+ Sbjct: 7 RADLLELTAEALTALANAGFVKRAQKDVAAGLLPRLATEADGTVVAEFADGARTRLPPGR 66 Query: 64 ALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEE--------------------- 102 L++A C+C A+GMCRHRVMLVL+YQ+ A + + Sbjct: 67 TLRDAACTCAASGMCRHRVMLVLAYQQDHARNAAPGAGDGSDSGGDAEAAVAAPAPAAEG 126 Query: 103 EWDPAIWLEEL--ATLPDATRKRAQALVAKG--ITIELFCAPGEIPSARLPMSDVRFYSR 158 W PA + + A++ + ++A L A + ++ + +P P+ARLPM VRF+SR Sbjct: 127 PWSPAHFDDAAVAASIAPSVLEQAARLAASRPVVAVQPWQSPSVPPAARLPMCTVRFFSR 186 Query: 159 SSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEG 218 SS+ ARCDC +G+ C HVV+A+ AF A E + E D P A+ E Sbjct: 187 SSLVHARCDCQQGSGCAHVVVALWAFRAAG----ELAPGGDEAMVEVAPRGDAPPAAPES 242 Query: 219 NA--------------------CRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETC 258 R+ + +L LWL G SQP + A F A+ Sbjct: 243 GGPAPVAAAPPPGRLRAPQALQLREALDELLLALWLEGTSQPPMALAARFGAVRAQAQAL 302 Query: 259 NWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGE---V 315 WRWV + L +L + + AR+S + L A L +R A Sbjct: 303 GWRWVDDGLAELSLLLQSQQARSSRDDPARTLQVAAELWARPRAAAHAEDASGQPPGTTR 362 Query: 316 PPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWP 375 PP+ V+G G+ GE LDHL+LVSLG W D G + F DPDT ++ L R WP Sbjct: 363 PPLHASQVLGIGVKGEVALDHLKLVSLGAALWADDAAEGASVLFADPDTQTVTVLERQWP 422 Query: 376 RSEQENS-PAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAW 434 R E + RR+ F +A GQ++++ A R A+G + + + R + V+PLSP AW Sbjct: 423 RGEGGPGQALSGRRVAGFPLRQVAAGQVITKTATRRANGAIDIGSGARQTGVMPLSPTAW 482 Query: 435 QMLSAPLRQPGIVALREYLRQRPPACIRPLNQVD----------NLFILPVAECISLGWD 484 L APLRQ + +L E LR PP ++P ++ P WD Sbjct: 483 DDLGAPLRQGSVESLVERLRNAPPEFVQPRQAATGAAGGTSGPLHVVAFPGMHADECTWD 542 Query: 485 SSRQTLDAQVI--------SGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVS 536 ++ Q L A+++ + + L L+LP A+AP AV+ +A L + V+ Sbjct: 543 AAAQVLHARIVRRDGDGDGAADAASAALHLALPHRAAAPGAVDALARTLSGEWGSLRAVA 602 Query: 537 GFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLI 596 G + +G+ ++P ++T RA E L + P LL L Sbjct: 603 GPAALHQGRAVMQPLALLTDQRAVVPQIEAPAAQALALRTASETPQGVQALLGATSQWLA 662 Query: 597 QLLHNGWRYQEQSAIGQA 614 Q L G R+Q +A Sbjct: 663 QWLRQGLRHQPGGLETRA 680 >UniRef50_Q8F862 Putative uncharacterized protein n=2 Tax=Leptospira interrogans RepID=Q8F862_LEPIN Length = 644 Score = 441 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 121/576 (21%), Positives = 243/576 (42%), Gaps = 57/576 (9%) Query: 4 LRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-ATFSDGVRTQLANG 62 +R ++L L+ Q L L++ G V R+LK++E+G + D + + D V L Sbjct: 1 MRQDILSLSLQELEVLTSKGTVNRALKDIESGAKGKWKETEDGNVEVVWEDSVICVLPGS 60 Query: 63 QALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEEL--ATLPDAT 120 ++E+ C+C + G+CRH + +++YQ+ S + W+P +E + + ++ Sbjct: 61 VPIQESSCTCSSTGVCRHIIRTIVAYQK---RNISDKPNLSWNPGSISDESLHSFISASS 117 Query: 121 RKRAQALVAKGITIELFCAPGEIPSARL-PMSDVRFYSRSSIRFARCDCIEGTLCEHVVL 179 +A+++ GI +EL ++P A++ + V F + IR+AR DC + + + Sbjct: 118 FTKAKSIFNSGIAVEL--DRTDVPVAKIHGLGTVHFPVPNDIRYARADCKGSLGEQIIAI 175 Query: 180 AVQAFVEAKAQQAEFNHLIWQMR-SEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGIS 238 AV +F ++ + I +++ S H+T + E QY Q G+S Sbjct: 176 AVWSFRLTHLKKEFVSTNIREIKISSHITDRANTILKE----IIQYGFQ--------GVS 223 Query: 239 QPLIHYEAAFNRALQAAETC---NWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAA 295 + L +R Q +C W SE L +L+ + S ++ + ++ L Sbjct: 224 EHLK------DRLFQLKRSCLEEGLLWPSEILSELQEEYSKYLLHDSLFDPDQVVYLLGE 277 Query: 296 LNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGL 355 R++ A +++ G +P + + G ++L L+ LG + + + Sbjct: 278 WIIRMD-----ALKENKGAIPSL---VISGDTKTYSSELIVRSLIGLGSGIKVLQKGFVV 329 Query: 356 RIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGA----LAGGQIVSQAAKRSA 411 +F DP + IL S+ + +E P + F+ G IVS + K++ Sbjct: 330 LSYFADPKSDKILLYECSFEKHTEE--PFHSIGNFTVFKGIPLHNFGKSSIVSSSIKKTT 387 Query: 412 DGELLLATRNRLSSVVPLSPDAW--QMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDN 469 G+L + S+ + L+P + + LS + + L ++PP + P N Sbjct: 388 SGKL------QFSNKLTLNPQTFFFESLSENILSNNFNETIKLLLEKPPRPLGPRWAAGN 441 Query: 470 LFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTD 529 F+ V +D+ Q ++ ++ G N+ + LP A +E + L D Sbjct: 442 FFVFKVERFTQPHFDNILQQINIELEDQNG--NIAYVQLPYYTRASDGIENLKHAL--GD 497 Query: 530 DPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAE 565 + V G + G+L ++P + + + Sbjct: 498 SHLRYVCGVANVASGRLYIKPVSFVIEQGGNRTMLQ 533 >UniRef50_A4X8W9 Putative uncharacterized protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4X8W9_SALTO Length = 674 Score = 430 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 158/629 (25%), Positives = 251/629 (39%), Gaps = 52/629 (8%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQA 64 R +LL LTP +L AL+N G VKR+ KEL+ I + + TF DG L G Sbjct: 9 RGDLLALTPDSLAALTNRGLVKRATKELDQAAPAVIVDGDGTVRGTFPDGTAASLPRG-G 67 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLC----------------------ATTQSTEKEE 102 L CSC A +CRH V L+L+YQR A + Sbjct: 68 LDAGACSCDATTICRHLVGLILAYQRQHTAAGLLADPGPQPRSPIDVPSAAPPNTGTGPA 127 Query: 103 EWDPAIWLEEL------ATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFY 156 W P + +E A L A R+ +A + P +P+ L + VRF Sbjct: 128 AWSPGSFTDEQLTSRVGARLMAAARRVERAGYLARVRRPTSTDP--VPTVELGSATVRFL 185 Query: 157 SRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASE 216 + F D + T + + LAV AF A E + ++R E ++D Sbjct: 186 VPHDLGFVHTDAVADTRDDVLALAVWAFRVAD----ERAPGLAEVRVEVGGPAND---DG 238 Query: 217 EGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDA 276 G+ + + L G + AA QA + RW +L L + A Sbjct: 239 SGSGIEATLLLADRVLRDGAVHVGT-GIAAAVAEQQQALDAVGLRWPLLALGDLADHLTA 297 Query: 277 FHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDH 336 + R++ Y + L++R A + G + + V+G+ A E L Sbjct: 298 YRERSARYRPDTLAGLILELHAR-----HRAVCNGGGSLRAL----VLGTDEAAETPLRQ 348 Query: 337 LRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGA 396 +RL SLG R + + I+ +T ++L L RSW E + + A RR+ A Sbjct: 349 VRLDSLGCRVSAVGQQRTVEIFHAHAETATVLVLRRSWE-GEADGAALARRRIAGTTVDA 407 Query: 397 LAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQR 456 LA G +V+++A RSA + LAT + V S W L L I AL L Sbjct: 408 LATGNVVTESAVRSASRTVRLATSRLAQTTVNPSQGHWDALPKALVVRDIGALGVELDAL 467 Query: 457 PPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPY 516 PP +RP + + + ++ VA+ +++ + +Q LDA ++ G +T + + +AP Sbjct: 468 PPRMVRPRIEAELVRVVTVADVLTVNYSPGQQRLDAVIVDAHGTRATVTAT--HTVAAPG 525 Query: 517 AVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSAS 576 ++ +AA L + V VSG V G + ++P + D + + L Sbjct: 526 RLDAVAAALNGKNGRVRYVSGIVHRSAGAVVIDPLALAVDGAMVVPDLAPSVASHLGFGG 585 Query: 577 VLPVPSTAHQLLIRCQALLIQLLHNGWRY 605 L + LL + H G + Sbjct: 586 GDEPSQLVAALQE-SRTLLTTVAHQGLLH 613 >UniRef50_C3JM87 Swim zinc finger domain protein n=2 Tax=Rhodococcus erythropolis RepID=C3JM87_RHOER Length = 644 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 153/616 (24%), Positives = 256/616 (41%), Gaps = 42/616 (6%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQA 64 RP+L LT AL ++N G VKR+ + PE+ ++ ++ + DGV T L G Sbjct: 7 RPDLAALTDDALALVANRGLVKRAARMFAE-ETPELLVTSERILVRYGDGVETSLPAGIP 65 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEEL--ATLPDATRK 122 EA C+CGA+ +CRHRV LVL Y+ A S+ +W P + +E A L A Sbjct: 66 FSEASCTCGASSVCRHRVGLVLVYR---ANHGSSFDHIDWTPGEFDDEALEAFLGGAVLA 122 Query: 123 RAQALVAKGITIELFCAPGEIPSAR--LPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 RA +G + A G P R LP VRF + A T E + LA Sbjct: 123 RANRTRLQGYQATVHRARGTDPVVRVELPHCTVRFLVPHELSHAHSSASAHTTAEAIALA 182 Query: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP 240 V A A + H+ RS V +D + L++T+ + G+S Sbjct: 183 VWAVRAADESGTDHVHVG---RSSVVRDADRS----------ALARALARTILVDGLSTT 229 Query: 241 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL 300 A R + E + W++++ +L ++A+ R + ++ +A +++R+ Sbjct: 230 TAVQHATAVRDTRTIEAGSAIWLADACIELTDQIEAYSMRHAGHSRTRVAMIIAEIHARV 289 Query: 301 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT 360 + V TV+G+ GE L RL+SLG R + I+F Sbjct: 290 ELGE---------SVDSSLAGTVLGTETPGETPLRRSRLISLGARVTATGDSTTADIYFA 340 Query: 361 DPDTGSILHLSRSWPRSEQE---NSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLL 417 +PD+ ++ +S W E +TRR+ ALA +++++A R A+ + L Sbjct: 341 EPDSDAVFLMSHDWSSESDEALSGYAISTRRIAGSTVAALASSTVLTESAVRRANHRIRL 400 Query: 418 ATRN-RLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVA 476 + +S++PL DAW+ S + R ++ +RPP+ R D + ++ + Sbjct: 401 GRKGIGRTSILPLGVDAWEK-SIDVVDDYAEMHRRFI-ERPPSFARARLTTDGVGVMRID 458 Query: 477 ECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVS 536 IS + + Q +V G+G N+ +S+ A AP A++ M + VS Sbjct: 459 SVISTDYAPAEQIWTMRV--GDGRGNLAQVSVVHRAQAPGAIDAMVRAMS---ARPRAVS 513 Query: 537 GFVSFVEGQLTLEPRVMMTKTRAWALDA-ETTPVAPLPSASVLPVPSTAHQLLIRCQALL 595 G ++ G L + P + D E A + A L ++L Sbjct: 514 GRLTVRAGALWMTPFAVACDLGVIVPDLEEGLGSATMTRAVTTGGVDAIDSALEGALSVL 573 Query: 596 IQLLHNGWRYQEQSAI 611 + H G R + I Sbjct: 574 ADIAHRGLRNAAEPTI 589 >UniRef50_B1M3T8 Zinc finger SWIM domain protein n=2 Tax=Rhizobiales RepID=B1M3T8_METRJ Length = 658 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 173/606 (28%), Positives = 253/606 (41%), Gaps = 64/606 (10%) Query: 3 SLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-ATFSDGVRTQLAN 61 RP+L LT L L+NAG VKR+L+E+ G P ++ D + A F+DG T+L Sbjct: 1 MARPDLRALTDDGLIQLANAGLVKRALREVAAGAGPALAEAGDGTVEARFADGTVTRLGP 60 Query: 62 GQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEE------------------ 103 G+ A C+C A+GMCRHRV LV++Y+ A E Sbjct: 61 GRPPDAATCTCPASGMCRHRVALVVAYRAAVADGPVEGAAEGPTEETAERTAVPAAAAVA 120 Query: 104 WDPAIWLEE--LATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSI 161 WDP A L A + L+A GIT+ L G +P+ARLP + VRF ++ Sbjct: 121 WDPGTLDGATVEAGLGGAAAAELRRLLAGGITVGL--ERGAVPAARLPTATVRFLVPDAV 178 Query: 162 RFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNAC 221 +ARCDC G C HV LA++AF EA V + A+ + Sbjct: 179 GYARCDCAAGGGCAHVALAIRAFREA-------AGAPEIRLGGAVPARTATAATPAEDGL 231 Query: 222 RQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARA 281 + ++ L G+ ++AA R +AAE V + +L + A+ R Sbjct: 232 AEAADRVVAGLLEAGVVSGPEAHDAALVRLRRAAERRGATQVLLAEAELTDQLAAYAGRH 291 Query: 282 SHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVS 341 + Y+A L A L R+ +G G E + RLVS Sbjct: 292 AAYDAAVVLALAAELLGRVRGGA-----------------VALGLGQPYETAMGKTRLVS 334 Query: 342 LGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAAT--RRLF--SFQAGAL 397 LG R R+ D DTG++L L R++ E E A RL Sbjct: 335 LGARFLARGRGAAARVALADTDTGALLALERAFAPGEAEADVVAGLPGRLLSPGLSVAGT 394 Query: 398 AGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRP 457 GQI++ A+R ADG L L R + + L DA L APL + ++ L RP Sbjct: 395 GQGQILTSVARRRADGLLALGQGARGRTAL-LPRDARVRLPAPLAARDVSSVLRRLADRP 453 Query: 458 PACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYA 517 PA +RP ++++ + V + W QT A V E L L+ +AP+A Sbjct: 454 PAFLRPRDRLEAFHVFAVEAVLGQAWAPGAQTWQAAVELPE-AGGTLHLARAYDPAAPHA 512 Query: 518 VERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPL--PSA 575 ++ +A PV V+G V +G L +P W++ A+ V L P Sbjct: 513 LDALAGACSGRWGPVRQVAGPVRIEDGALVCDP---------WSVSADRLVVPDLAAPDG 563 Query: 576 SVLPVP 581 + P+P Sbjct: 564 AGHPIP 569 >UniRef50_C6WE89 Zinc finger SWIM domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WE89_ACTMD Length = 637 Score = 363 bits (932), Expect = 9e-99, Method: Composition-based stats. Identities = 154/619 (24%), Positives = 247/619 (39%), Gaps = 36/619 (5%) Query: 3 SLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-ATFSDGVRTQLAN 61 R +LL LT +AL L+N G VKR+ +E+E G PE+ +D + F DGV L Sbjct: 1 MRRADLLALTSEALVDLANRGLVKRATREVEAGAGPELGVADDGAVTGVFPDGVTAVLPP 60 Query: 62 GQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEE--LATLPDA 119 G L A CSCGA G CRHR+ +VL+YQR + E E W P + +A + Sbjct: 61 GAGLDAASCSCGARGACRHRIAVVLAYQREHGGAEE-EVFEPWSPGSVPDAELVAAFGER 119 Query: 120 TRKRAQALVAKGITIELFCAPGEIPSA--RLPMSDVRFYSRSSIRFARCDCIEGTLCEHV 177 A+ ++ G+ + L A P A LP + VRF + +A D + V Sbjct: 120 AVAAARRVLRSGVPVVLRRASAGDPVAVAELPSATVRFLVPGELGYASTDAAALRRDQLV 179 Query: 178 VLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGI 237 LAV AF EA Q + +R + S+ + + + + ++ Q L G + Sbjct: 180 ALAVLAFREADEQ----GFVDPVVRFDAGGSAGPGGSGDGPDPLAEALELTGQLLREGAV 235 Query: 238 SQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALN 297 +AA R+ + W + ++ +L + A+ AR + + +A + Sbjct: 236 HTGP-VLDAALERSRRDLTAAGMHWPAAAVGELAEQLAAYRARGARHRVERVAELVAEVR 294 Query: 298 SRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRI 357 +R P TV+G A E + +RL SLG R E + Sbjct: 295 ARARATG--------------PRSTVLGFDEAAETPMRRVRLTSLGCRVTGTGEDRTAEV 340 Query: 358 WFTDPDTGSILHLSRSWPRSEQENSPA---ATRRLFSFQAGALAGGQIVSQAAKRSADGE 414 +F D D +L L W E + RRL ALA +VS++A RS Sbjct: 341 FFADGD--GVLVLRHRWQLGADERPTGHDLSGRRLSGTTLAALAAANVVSESAVRSPSRV 398 Query: 415 LLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILP 474 + L + V AW L AP+ + A L PP +R + +++ ++ Sbjct: 399 VRLTASRVAKTSVTPLGSAWTGLRAPVLVRDLAAAGAELAALPPRVVRARVEAEHVRVVE 458 Query: 475 VAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCL 534 VA S+G+D Q L+A V G ++ + ++ A A T Sbjct: 459 VAAVRSIGYDPGAQRLEAVVADAAGTTALVRATYRSTTPAALDALARALAAGPTH----- 513 Query: 535 VSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQAL 594 VSG +S G+L + P ++T D ++ ++L +L Sbjct: 514 VSGALSRTGGRLVITPFAVLTPDGPVVPDL-AGGDVGGLVGGLVVGRDVLAEVLESALSL 572 Query: 595 LIQLLHNGWRYQEQSAIGQ 613 + H G + + G+ Sbjct: 573 CAEAAHRGLEHLAATMPGR 591 >UniRef50_C6JNG6 Predicted protein n=2 Tax=Fusobacterium RepID=C6JNG6_FUSVA Length = 563 Score = 358 bits (917), Expect = 5e-97, Method: Composition-based stats. Identities = 108/588 (18%), Positives = 228/588 (38%), Gaps = 96/588 (16%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENG-NVPEISHENDALIATFSDGVRTQL 59 +N ++P L + + + ++SN G KRS+K+LE +S ++ +I + V +L Sbjct: 8 INEIKPFLPFINEEFIVSISNKGIYKRSIKDLEKARENILLSVKDTGIIEVKIEDVVVEL 67 Query: 60 ANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAI-------WLEE 112 +++++C+C A+ +C+H VM +L + + Q+ E++E + + EE Sbjct: 68 --NVNIQKSRCTCPASSICKHIVMALLYLKEFYDSNQNEEEKEIEEDKEEKIDEINFYEE 125 Query: 113 LATLP-----DATRKRAQALVAKGITI--ELFCAPGEIPSARLPMSDVR--FYSRSSIRF 163 L L + K+ V I I E G++ + + + + F SI Sbjct: 126 LKKLTGDKILEIVGKKTYNSVINSIFIRNEAIFEYGDMLTVTIASQNAKVYFPKEKSIEN 185 Query: 164 ARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFAS-EEGNACR 222 A C C E +C H + A+ +++ ++ +T D + + E G + Sbjct: 186 AMCSCKEKGICSHKIYALISYL---------------IKEGKITEEDTEYETIEIGEKEK 230 Query: 223 QYVQQLS---QTLWLGGIS--------QPLIHYEAAFNRALQAAETCNWRWVSESLRQLR 271 + ++ L +++ GIS Q Y + L A+ ++ L+ L Sbjct: 231 EIIENLHIFISSIFDRGISGLTGNEISQAEKFYIQIYGIKLFAS--------ADELKNLS 282 Query: 272 ASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGE 331 + + + ++ ++ +H L ++ +R + + +D+ ++ V R + Sbjct: 283 SELGFYFSKNISFSNKRLMHILCSIYNRTSAL--LIVKDNRKKIMLVGQRQ------EEK 334 Query: 332 AKLDHLRLVSLGM----RCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATR 387 LD++ L+ LG D+ + +F D SIL +S P ENS Sbjct: 335 FNLDNIELIGLGASGGITKRNDL---LITAYFYCKDINSILSMSTLRP---YENSS---- 384 Query: 388 RLFSFQAGALAG-GQIVSQ--AAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQP 444 Q L GQ+ S + K + +++L + + + + + Sbjct: 385 -----QISTLYNMGQVWSNELSFKEVSVSKMILKDAKLSTGKISSAKSTICNIKGKTTEE 439 Query: 445 GIVAL--------REYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVIS 496 I L LR+ P + N+F++ E ++ +D Q L V+ Sbjct: 440 DINELAVSDYSLIITELRKHKFRYFEPYSATKNIFLIKAEEIKNIEYDKIEQKLKFDVLD 499 Query: 497 GEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVSFVEG 544 G N + + ++ + A++ +T + G ++ G Sbjct: 500 SNG--NTIVFDIKYNSVSENAIKYFEK--NKTGSYFEYILGSITEKNG 543 >UniRef50_D1S2D8 Zinc finger SWIM domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S2D8_9ACTO Length = 709 Score = 289 bits (738), Expect = 3e-76, Method: Composition-based stats. Identities = 122/521 (23%), Positives = 191/521 (36%), Gaps = 29/521 (5%) Query: 92 CATTQSTEKEEEWDPAIWLEE--LATLPDATRKRAQALVAKGITIELFCAPGEIPS--AR 147 + + W P +E A + A+ + +G + P Sbjct: 150 REGAAAGSEPWRWSPGDVTDEELAAAIGAPALTAARRRLRRGYAAVVHRPDTADPVPRVE 209 Query: 148 LPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVT 207 LP VRF I +AR D + E + LAV A A + + ++ T Sbjct: 210 LPTGTVRFLVPRQIGYARGDAADDGG-EAIALAVWACRAADREHPDRQEAQVRV-GGTAT 267 Query: 208 SSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESL 267 ++ P + + L G +A + + RW ++ Sbjct: 268 VTERPALDAAVALAADVLLTGAAHLGSG--------VDARLAATRRDLDAAGLRWPLLAV 319 Query: 268 RQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSG 327 L ++A+ AR + Y LA L ARR ++ P V+G+ Sbjct: 320 EDLAGQLEAYAARGARYRPETFADLLAEL---------PARRRAVVNAGATPVERVLGTH 370 Query: 328 IAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPA--- 384 E L +RL LG R G+ + P S+L L R++P ++ Sbjct: 371 EPAETPLRRVRLTGLGARVRCSGGEVGVDVVLAHPAAVSVLVLRRAYPVTDDGPPTGHEL 430 Query: 385 ATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQP 444 A RR+ GALA G +VS++A RSA L +A + V W L L Sbjct: 431 AGRRVTGTTLGALATGNVVSESAVRSAAHRLRIAAGRLARTTVTPGAGEWSGLPPGLLAR 490 Query: 445 GIVALREYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVL 504 AL L RPP +RP +++ +L + E ++G+ + Q L A V +G + Sbjct: 491 DPDALAAELAGRPPRLLRPRTAAESVRVLALGEVRAIGYAAGEQRLHATVTGADGGTATV 550 Query: 505 TLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDA 564 T + A+AP A++ +AA L T P VSG V L +EP ++ A Sbjct: 551 TAT--HHAAAPGALDALAAALDGTQGPPRYVSGTVRRGADGLVVEPLAVVADAVVVPDLA 608 Query: 565 ETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLHNGWRY 605 L + +V P L ALL Q H G R+ Sbjct: 609 PGVGDGRL-TGAVDARPDPVAVALGTASALLAQAAHTGLRH 648 >UniRef50_C0R172 Zinc finger SIM domain protein n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R172_BRAHW Length = 563 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 85/590 (14%), Positives = 198/590 (33%), Gaps = 89/590 (15%) Query: 19 LSNAGFVKRSLKELEN--GNVPE---ISHENDALIATFSDGVRTQ-LANGQALKEAQCSC 72 ++N G RS+K+++N N PE I D + T G + + + N + +K ++CSC Sbjct: 1 MTNKGIYNRSVKDIDNIINNSPEKIKIEETEDKIKVTIDTGEKIEVILNDEDIKSSKCSC 60 Query: 73 GANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDP------------------AIWLEELA 114 + +C+H +M +L + L + E + I +E+ Sbjct: 61 PSKDICKHIIMSLLYIEHLDTENKENESNTDTAENNTEIEIKEENNTFDEVKNISYDEIK 120 Query: 115 TLPDATRKRAQ-ALVAKGITIELFCAPGEIPSARLPMSDVR--FYSRSSIRFARCDCIEG 171 L +T+K + AL IE + +P +V F + SI+ A C C + Sbjct: 121 KL--STKKNFEYALDRLDDNIEADIEEKAMLEINIPEENVIIYFPKKDSIKKAVCSCKDS 178 Query: 172 TLCEHVVLAVQAFV-------EAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQY 224 +LC H ++A+ + E K E + I + E + + + Sbjct: 179 SLCAHKIIAILKYKQMYNSLEEIKEDDKEIDENILKFSKEFIENIFEKGLYSCSEKDFDI 238 Query: 225 VQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHY 284 +QLS L + + + + + + S+D+ + + + Sbjct: 239 AEQLSVKLQVKEMPELAKMFRS-----------------------ISESIDSMINKHASF 275 Query: 285 NAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGM 344 N L+ L + + + A++D+ + + + I ++ LV LG Sbjct: 276 NKLFTFAILSRLYNTIKVIE-KAKQDNDNKTVKLLTGEIRSKYINRKSA----ELVGLGS 330 Query: 345 RCWQDIEHY-GLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIV 403 W Y G + + +T + S P + + +++ I Sbjct: 331 YPWISSTGYLGASAYLYNLNTKKLSFFSYVIPTFYDNSKISYDDVRSNYRKKIHFENNIS 390 Query: 404 SQAAKR--------SADGELLLATRNRLSSVVP--LSPDAWQMLS-----APLRQPGIVA 448 + + + E +++ S ++ + + + L Sbjct: 391 IEEISKYKLKFINYKVNNEERISSSKFTSVILNDRMDYKLLEEIKNSKNNEELFAENYDD 450 Query: 449 LREYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVIS--GEGEDNVLTL 506 ++ ++ + I + ++ Q L +++ E ++ LTL Sbjct: 451 IKN--IDFKYDYFNKNDRSK-IIIAKFQIIENQEFNKIEQILYFDIVNNYEEDDEERLTL 507 Query: 507 SLPASASAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTK 556 ++ ++ ++ + D + + + + P ++ Sbjct: 508 NVKYTSIHSNGIKYIMNYKNSNIDKDRFIV----LEKTKYYIRPISIINA 553 Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 49/119 (41%), Gaps = 4/119 (3%) Query: 6 PELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQAL 65 E+ ++ + LS + +L L++ +I + I + V ++ Sbjct: 109 DEVKNISYDEIKKLSTKKNFEYALDRLDDNIEADIEEKAMLEINIPEENVIIYFPKKDSI 168 Query: 66 KEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRA 124 K+A CSC + +C H+++ +L Y+++ ++ +E + D E + + Sbjct: 169 KKAVCSCKDSSLCAHKIIAILKYKQMY----NSLEEIKEDDKEIDENILKFSKEFIENI 223 >UniRef50_C1QFN1 SWIM zinc finger-containing protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QFN1_9SPIR Length = 597 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 73/567 (12%), Positives = 188/567 (33%), Gaps = 85/567 (14%) Query: 11 LTPQALTALSNAGFVKRSLKELEN--GNVPE---ISHENDALIATFSDGVRTQ-LANGQA 64 + L L+N G RS+K+++N N PE I +N+ + T G + + + N + Sbjct: 12 INETFLLTLTNKGIYNRSVKDIDNIINNTPEKIKIEEDNNKIKVTIDTGEKIEVILNDED 71 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEK------------------------ 100 +K ++C+C + +C+H +M +L + L ++ + Sbjct: 72 IKSSKCTCPSKDICKHIIMSLLYIEHLDTENKADDDIENNNENNNENNNENNNKETKEKN 131 Query: 101 ----EEEWDPA--IWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSD-- 152 +D I +E+ L AL IE + +P + Sbjct: 132 NDITNNTFDEVKNISFDEIRKLSTKI-NFEYALDRFYENIEAEINENAMLEINIPEENTI 190 Query: 153 VRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDP 212 + F + SI+ A C C + +LC H ++A+ + E + ++ Sbjct: 191 IYFPKKDSIKKAVCSCKDSSLCAHKIIAILKYKETYGTLEDIKEEDKEI----------- 239 Query: 213 FASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRA 272 ++ ++ ++ ++ G + + N +++ R + Sbjct: 240 -----DENILKFAKEFAENIFEKGFYSCSEKDFDISEQLSVKLQVKNMPEIAKIFRSIAE 294 Query: 273 SVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEA 332 S+DA + + +N L+ L + ++ ++ + + V + +G Sbjct: 295 SIDAMINKRASFNKLFAFASLSRLYNTIHVIEKAKKENDNKTVKML-------TGEIRSK 347 Query: 333 KLDHL--RLVSLGMRCWQDIEHY-GLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRL 389 ++ + LG W Y G + + + + S P + Sbjct: 348 YINRTSGEFLGLGAYPWISSTGYLGASAYLYNINAKKVSFFSYVIPTFYDNAKISYDDIR 407 Query: 390 FSFQAGALAGGQIVSQAAKR--------SADGELLLATRNRLSSVVP-------LSPDAW 434 +++ I + + + E +++ + S ++ L Sbjct: 408 SNYRKKIHFENNISIEEISKHKFKFINYKVNNEERISSSKKTSVILNDRINCKLLEELRI 467 Query: 435 QMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQV 494 + L + ++ + I + ++ ++ + Q L + Sbjct: 468 SKNNEELFAESYNDILN--IDFKYDYFNKNDRAK-IIIAKFQKIENIEFNKTEQILYFDI 524 Query: 495 IS--GEGEDNVLTLSLPASASAPYAVE 519 ++ + ++ LTL++ ++ ++ Sbjct: 525 VNYTEKYDEERLTLNIKYTSIHSNGIK 551 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%) Query: 6 PELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQAL 65 E+ ++ + LS + +L EI+ I + ++ Sbjct: 140 DEVKNISFDEIRKLSTKINFEYALDRFYENIEAEINENAMLEINIPEENTIIYFPKKDSI 199 Query: 66 KEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRA 124 K+A CSC + +C H+++ +L Y+ T + + + E + + Sbjct: 200 KKAVCSCKDSSLCAHKIIAILKYKETYGTLED----IKEEDKEIDENILKFAKEFAENI 254 >UniRef50_C0ZD36 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZD36_BREBN Length = 552 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 80/529 (15%), Positives = 177/529 (33%), Gaps = 54/529 (10%) Query: 2 NSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLAN 61 + + + L +N G RS+KE+E G +D + SD +L Sbjct: 6 SEFHRFIALCNEEYLIKYANKGIYNRSIKEMEKGMSVSYEFGDDYVECALSDDSVCRLHA 65 Query: 62 GQALKEAQCSCGANGMCRHRVMLVLSYQRLC--ATTQSTEKEEEWDPAIWLEELATLPDA 119 ++ CSC ++ +C+H ++ ++ Y + A ++ E++E + P + L P Sbjct: 66 D--IERFSCSCPSDKICKHVIISIVYYAQNHLQAGAETEEEQETYKP-DFSWLLQLQPSH 122 Query: 120 TRKRA------QALVAKGITIELFCAPGEIPSARLPMSD--VRFYSRSSIRFARCDCIEG 171 K + L E+ + L D V F S S I + C C Sbjct: 123 ISKAFTPAQLEEVLFRLDYFEEMEVVETSFLTMTLHTQDISVSFDSESEIGKSMCTCKAK 182 Query: 172 TLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQT 231 C H + + + + + +D + ++ + + + Sbjct: 183 GNCLHKLEVILRYRAMHQ--------LQDREQLQASVTDVSYETDVVTEAKALIAE---- 230 Query: 232 LWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLH 291 + G+++ AA N V + +R + ++ F R ++ L Sbjct: 231 ILGIGLAKLSQTICTRLELLAIAAHNGNLPRVEKDIRGIHGELNLFFQRHVKFSTEALLD 290 Query: 292 QLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIE 351 +L+ + L ++ ++ ++GS + + L L +LG W+ Sbjct: 291 RLSRVYLSLLALEKTDHTEAKK--------QLLGSFKSKYHMVPQLSLYALGANPWETRS 342 Query: 352 HY-GLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFS--------FQAGALAGGQI 402 Y G+ +F I + + P E + + + L+ Q+ Sbjct: 343 GYKGITYYFYSLSDQRIYTYTEARPVY-YEGISFSFKDSYKGKVPWGGLISMEELSHSQV 401 Query: 403 VSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLS-APLRQPGIVALREYLRQRPPACI 461 + AK + + L + + + + + D + L + + Sbjct: 402 ILTQAKTNREQRL---SSSEETQLTIVPRDNIEELDLGKVLVCDWSNGWKDAAGDMFE-- 456 Query: 462 RPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPA 510 +D++F+L + + +D Q L + + + L LS+ Sbjct: 457 ---TALDSVFLLKANKFTQVDFDQKTQQLILTIEDEQ--SHSLQLSISY 500 >UniRef50_D0SME1 Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SME1_ACIJU Length = 710 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 106/589 (17%), Positives = 199/589 (33%), Gaps = 61/589 (10%) Query: 9 LELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEA 68 L +L +N G V+R+LK++E G + + E I SDG + L++ L A Sbjct: 8 LAYDQDSLVTYANTGLVRRALKDIEAGKII-LQTEQSEHITIESDGQQVGLSSA-GLVNA 65 Query: 69 QCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQALV 128 CSC A G C+H V VL Q+ + E E+ + ++ + Sbjct: 66 SCSCPATGACKHIVAAVLYLQQHLQNSVQQPIENLTT--DSAAEIQSTTVELVEQLENNF 123 Query: 129 AKGITIELFC--------------APGEIPSARL---PMSDVRFYSRSSIR--------- 162 + E+ I ARL F S++ Sbjct: 124 QPNLIEEILRVDLNQIAKKIGKAQTQKAIKLARLWQKEQQTELFEEEYSLKIRIKSLAED 183 Query: 163 --FARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNA 220 + + G L ++ A ++ W + T + + EG Sbjct: 184 IIYVAGAGLAGMLSNLEKDQSAYYLAALSEVQRLQGKFWTKLELNETENPAVLSESEGQF 243 Query: 221 CRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHAR 280 + L+Q + G+S + +A + + ++ LRQL V R Sbjct: 244 IIELKDDLAQLIEF-GLSHVNEMTARQLHLLNMSARSESLPRLAAMLRQLSGQVARLLNR 302 Query: 281 ASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLV 340 H + E L LA +N+ L + + GE + ++D L L+ Sbjct: 303 DEHSSEHETLLYLAQINAYLYQLEH-----AEGEALVRLRGKSRRQYEVDQEQID-LELL 356 Query: 341 SLGMRCWQD-IEHYGLRIWFTDPDTGSILHLSRSWPRSEQEN----SPAATRRLFSFQAG 395 LG R W+ G+ ++F++ + I ++ + + N + + + ++ A Sbjct: 357 PLGARWWRTLGGARGITLYFSEQENPQIFEVTLARTENNDPNFNRYNAWSQQSIWMMTAQ 416 Query: 396 ALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREY--- 452 L ++ Q + S D L + + S +PL+ L+ I + Sbjct: 417 QLMQKKVRLQQPRFSEDDRL---SASGQSRALPLNS------LKDLQDFSIYQHIGFDNW 467 Query: 453 --LRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPA 510 L+QR ++ + VD +L ++ + D Q L V + + L L Sbjct: 468 HKLQQRWQQQLQSIEGVDQTVMLNISSYDNPQVDEVEQCLWWTVYDQN--QSAIHLRLDW 525 Query: 511 SASAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRA 559 S + ++ L Q + V + L L P ++ Sbjct: 526 KTSEIEKIRQLEHLCNQK-TQINSVFVYCQIKGHTLVLSPISLLITQNE 573 >UniRef50_C6PZX2 Zinc finger SWIM domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZX2_9CLOT Length = 559 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 86/575 (14%), Positives = 192/575 (33%), Gaps = 71/575 (12%) Query: 7 ELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALK 66 + + + L +SN G R+ K+L + E +++ + D + ++ Sbjct: 14 FIKTIDKEYLIGISNKGITNRAEKDLAKVSNLEYETKDEGIEFKIDD---ITCFISEDIQ 70 Query: 67 EAQCSCGANGMCRHRVMLVLSY---QRLCATTQSTEKE--------EEWDPAIWLEELAT 115 + QCSC + +C+H +M L Q+ +++E E + + Sbjct: 71 KYQCSCPSRSICKHVIMCYLYLIENQKEIFKLENSEDECEEKKEEFLKLKEFKIEDIKKK 130 Query: 116 LPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCE 175 + + + + GI + G I D+ I + C C LC Sbjct: 131 IGEKSLGNIVKRIEYGINFTIK--EGSIIEVNFNDEDILVKLLDDIENSICSCKSKELCT 188 Query: 176 HVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLG 235 H A+ + E +L ++ + T+S+ F +E ++Q + +++ Sbjct: 189 HKAEALILYK------LEKGYLSFEKLKDF-TASELLFNRDEMKKAAVKLRQTIEDIFIT 241 Query: 236 GISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAA 295 G+S+ I N +S+R +R + + + + A L++L Sbjct: 242 GLSRTPITVLDKLNSIAVICHNYELPNFEKSIRDIREEFLLYFNKNASFTAKNLLNKLTN 301 Query: 296 LNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHY-G 354 + +R + + + + + + E L + L G W+ Y G Sbjct: 302 VYTRTIALENIEDLNKLSSLVGEFKSSY------YEIPL--VELHGFGAEKWKSKSGYEG 353 Query: 355 LRIWFTDPDTGSILHLSRSWPRSEQ---------ENSPAA--------TRRLFSFQAGAL 397 + +F + I + + P E +P ++ F G + Sbjct: 354 ITYYFLENKRNQIYTYTHALPTYYDNVKITRNFNEAAPWELNCSVQELSKITFKLVHGKI 413 Query: 398 AGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRP 457 G +S +++ + G ++ + + + D WQ L + Sbjct: 414 NSGNRISSSSE--SKGTIIDKSHFTKLNAENFTYDNWQQLLEKIFLNDNE---------- 461 Query: 458 PACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYA 517 N+ NL L + E +D+ Q + E +N+ + + S+ + Sbjct: 462 ------KNENYNLVFLNINEFGESNFDNVTQEFSLPIYDKE--NNLCKILVKFSSESKNL 513 Query: 518 VERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRV 552 + + L++ + G V + +L P Sbjct: 514 IRTLERLVKYKKTHL--FMGKVYIDKEKLMFYPIS 546 >UniRef50_B3ZDJ9 Zinc finger, swim domain protein n=7 Tax=Bacillus RepID=B3ZDJ9_BACCE Length = 545 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 90/561 (16%), Positives = 190/561 (33%), Gaps = 60/561 (10%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKE 67 L + L A+SN G KR++K+L +I E D + D ++ Sbjct: 11 LSSIDETYLIAMSNKGTYKRAMKDLAVVKNIKIDLEEDIVQIHLDDETTVTFTGD--IRS 68 Query: 68 AQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQAL 127 C+C A +C+H +M +L +++ ++ + ++ + ++ + + A+ + Sbjct: 69 YSCTCEARSICKHVMMALLEAKKMYEGEEN--IKVDFSALLNVDVRNIVSEKMW--AEMM 124 Query: 128 VAKGITIELFCAPGEIPSARLPMS--DVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFV 185 K ++ P VRF + S+ A C C +C H V A+ + Sbjct: 125 FRKTFHQKIVLEEEGALIVSFPEESITVRFLTAESVADAICTCKTEGICRHKVEAIYWYQ 184 Query: 186 EAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYE 245 ++ +H Q++ + S E G+++ Sbjct: 185 ----KERGISHETKQVQCLIIESDKLSIFKEMIEQIVHL-----------GLTRLTEKTI 229 Query: 246 AAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQE 305 + A + + R+L + + + + + L+A+ + ++ Sbjct: 230 YEIEQLSVKARSLKLAKLENLFRKLGTDIRLYRMKHASFQMASYRQTLSAIYEYIMLLEK 289 Query: 306 MARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHY-GLRIWFTDPDT 364 ++S P+R E L L + G WQ Y G+ +F + + Sbjct: 290 HRLQES-------PYR-----SEYYEVP--PLTLHAFGAAGWQTKSGYVGVTYYFYNREQ 335 Query: 365 GSILHLSRSWPRSEQENSPAATRRLFSFQA--GALAGGQIVSQA------AKRSADGELL 416 + ++S P E S + L Q G G +S++ AK + D +L Sbjct: 336 EKWITYTQSRPMF-YEGSNITSEDLHEQQVPWGIAGKGNELSRSCLWLKHAKLNVDFQLS 394 Query: 417 LATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVA 476 +++ + + WQ L + E L ++ A R +F + Sbjct: 395 SSSQTVGEAGGKTNVTEWQSL--------FITTWEELLKKVKAN-RLETSKQGVFCIEFT 445 Query: 477 ECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVS 536 E + Q +I +GE +L L + + + + L V + Sbjct: 446 EMEEWKFQKKEQKWIIPLIDKKGE--ILQLQMMKQPENEWTIRLVKIYLDSL--HVKRML 501 Query: 537 GFVSFVEGQLTLEPRVMMTKT 557 +L + P ++ T+ Sbjct: 502 VHPYQEGTKLVVTPIILYTEV 522 >UniRef50_C5D1M8 Zinc finger SWIM domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5D1M8_VARPS Length = 689 Score = 113 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 108/606 (17%), Positives = 184/606 (30%), Gaps = 45/606 (7%) Query: 10 ELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEAQ 69 L L+N G ++R+ K++E G + + + +DG R QL + + ++A+ Sbjct: 9 AYDDDTLATLANPGLLRRAAKDVEAGKI-AWAEQGTEAGVVTADGQRVQL-DARGPQQAR 66 Query: 70 CSCGANGMCRHRVMLVLSYQRLC------------ATTQSTEKEEEWDP---AIWLEELA 114 C C A G+C+H + L + L Q + DP + L+ A Sbjct: 67 CDCPAPGICKHILGAALWLRALEPAAPGSAGGAPSDEQQDRQAPPGADPLAEILALDAAA 126 Query: 115 TLPDATRKRAQALVAKGITIELFCAPGEIPSARLP--MSDVRFYSRSSIRFARCDCIEGT 172 A + A ++ + G LP + R+ + + + Sbjct: 127 LFKAAGVAAVRRAAAAASSVVEWRVQGGALIMNLPELGASCRWVAGAGYAGMVSEVPAAE 186 Query: 173 LCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTL 232 ++A+ A A Q W + D E A V+ + + L Sbjct: 187 RKAVHLIAIAALRSAHGQ-----PFAWPESARPAPVEDTVRLGERERAFLLQVESMLEEL 241 Query: 233 WLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQ 292 GG+S A +A ++ LR L +VD R + Sbjct: 242 LTGGLSHVSELTSARLLALNMSARGEGLPRLAALLRNLGGTVDLLVRRDHRAEERDAFAL 301 Query: 293 LAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQ-DIE 351 +A R++ R + R + L L+ LG WQ Sbjct: 302 MA----RIHALCAALARAEGELAVALRGRLQRDFDESAA-----LDLLPLGAHWWQTRGG 352 Query: 352 HYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSA 411 GL + F D +L S + P ++ + Q V +AA R Sbjct: 353 ARGLTVAFWDLAGARVLQASLARPDGSDTAFTRSSAWSANALWSGAGAAQSVCEAALRLE 412 Query: 412 DGEL----LLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQV 467 L LA + + A + L LR P + V Sbjct: 413 HPRLAEDGRLALGGATRAQPLPAWTADDPRLKSIGCGNWSELGVRLRAATGLSAEPFDAV 472 Query: 468 DNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQ 527 +L ++ D ++Q LD V G L L +P V+ + L Sbjct: 473 ----LLRPSDTRPPVLDEAQQRLDWLVQDDAGRW--LRLGIPVGPEHRQRVDNLDR-LAA 525 Query: 528 TDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQL 587 PV V + L P +++ AL + A + + L Sbjct: 526 RRAPVHAVLVRIERSAASTELMPLAVLSSNAKKALQTVSLDFADEAARTTSLANRILRML 585 Query: 588 LIRCQA 593 R Q Sbjct: 586 EARQQQ 591 >UniRef50_B4ESP7 Putative uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=B4ESP7_PROMH Length = 691 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 95/521 (18%), Positives = 164/521 (31%), Gaps = 50/521 (9%) Query: 13 PQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEAQCSC 72 ALT +NAG ++R+ K+++N ++S + SDG + L + +++A C C Sbjct: 12 EDALTVFANAGLLRRARKDVDN---EKVSVTDANTGQFSSDGQKVVL-HEAGIQQASCDC 67 Query: 73 GANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEE--------------LATLPD 118 A G C+H + +L Q A ST+ +P E L TL Sbjct: 68 SAAGCCKHILAAILWLQ---ANNNSTDDINTDNPIETSAEKIIAPVETPPLLPSLFTLDP 124 Query: 119 ATRKRAQALVAKGITIELFCAPGE-IPSARLPMSDVRFYSRS---SIRFARCDCIEGTLC 174 + A I L + + ++ + F + +G L Sbjct: 125 ELLIKKAGKPACRTAINLIEQWEDKTLVLEDTGTQLKIQLPDVDEPVIFLQASGYDGMLS 184 Query: 175 EHVVLAVQAFVEAKAQQAEF-NHLIWQMRSEHVT--SSDDPFASEEGNACRQYVQQLSQT 231 +AF A + N W + + SS P EE A ++Q Sbjct: 185 PFSSSQKKAFHLAIVAKIFKQNTQPWTWPEDLIPLKSSQRPLNDEEI-ALINTIEQFIDD 243 Query: 232 LWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLH 291 L G+S + + +A ++ LR L V R + L Sbjct: 244 LLRQGLSHISLSSATQLHLLNMSARAEGLPRLASYLRTLSTQVKRLAERHFTMDESNVLR 303 Query: 292 QLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIE 351 LA +++ L + + L L+ + W Sbjct: 304 LLAHISAYLFQLSYATPEQLK-----TLRGQLRRQYDDKKTSL---ALIPIDAHWWTAQS 355 Query: 352 HYGLRIW-FTDPDTGSILHLSRSWPRSEQ----ENSPAATRRLFSFQAGALAGGQIVSQA 406 + F D +T L +++ P S + L+ A L + QA Sbjct: 356 GALGTTFTFWDKETKQFLQATQARPNQLDTLFNRYSVWHSLSLWKQTADKLMRRPFLLQA 415 Query: 407 AKRSADGELL-LATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLN 465 + S +G+L + + L + L L L Y +P + PL Sbjct: 416 PRISDEGKLATIGDSFAQNQTDFLDVTDYHQLQTELGIHNWQDLPNYFTDQPEGFLSPL- 474 Query: 466 QVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTL 506 +L + L W Q + +V+ G L L Sbjct: 475 ------VLHIKSYNPLIWHEVEQCVIWEVVDNNGNSAFLRL 509 >UniRef50_D0KDG6 Zinc finger SWIM domain protein n=2 Tax=Pectobacterium RepID=D0KDG6_PECWW Length = 690 Score = 100 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 100/572 (17%), Positives = 188/572 (32%), Gaps = 50/572 (8%) Query: 13 PQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF-SDGVRTQLANGQALKEAQCS 71 AL+ +N G ++R+ K+L V + + F SDG + L Q ++ A+C Sbjct: 12 EDALSVFANVGLLRRAKKDLAGDKV--MLVTDAGQEGHFASDGQQVVLGA-QGIQTARCD 68 Query: 72 CGANGMCRHRVMLVLSYQRLCATTQSTE-----KEEEWDPAIWLEELATLPDATRKRAQA 126 C A G C+H + VL Q A + + E P L E+ L + Sbjct: 69 CPATGCCKHILAAVLWLQ-THAERGTEQAAVLSAETVAPPIDVLAEILQLDPDVLMKQVG 127 Query: 127 LVAKGITIELFC--APGEIPSARLPMSDVRFYSR---SSIRFARCDCIEGTLCEHVVLAV 181 V A + + LP ++ Y S + + + G L + + Sbjct: 128 KVQTRQAARFVQMWAEESVRTESLPNQ-LKIYLPTLESPVIYLAGTGMTGMLSDFLREKQ 186 Query: 182 QAFVEAKAQQA--EFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQ 239 A A + E + S + + + A + + G+S Sbjct: 187 PALHLATIARLFAENQRVWPWPEDCFAQESSERALNADEQALITMLNAFIHDVMNQGLSH 246 Query: 240 PLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSR 299 + +A ++ LR L V R + L +A L++ Sbjct: 247 ISKSSARQLHLLNMSARAEGLPRLAGYLRTLSGQVSLLADRHYSLEERDVLLFIARLSAY 306 Query: 300 LNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQD-IEHYGLRIW 358 L ++ + + V + + + L LV LG + W G Sbjct: 307 LFQLEQASPER-----LLLLRGQVR---RQYQQQPEALSLVPLGAQWWVTEGGARGATFS 358 Query: 359 FTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQA------AKRSAD 412 F + + +LH + R+++ + + + ++ QA G+ + +A + S D Sbjct: 359 FWESENQQLLH--CTQARADRHDVTFSRQGVWQGQAMWKQLGEHIMRAPFTLHHPRFSDD 416 Query: 413 GELLLAT---RNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDN 469 G+L N + P + A +A + L Y Q +PL Sbjct: 417 GKLAAGGESYANLDGTPWPAAAYAQCKSTAGIA--DWSQLSRYFEQENQDYPQPLL---- 470 Query: 470 LFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTD 529 L + I W Q + V +N L LSL + ++R+ QQ Sbjct: 471 LHVHRYEPVI---WHEVEQRIIWPVFDD--ANNALHLSLNWKKAQHQRIDRLKQATQQKW 525 Query: 530 DPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWA 561 + V ++ + L+P ++ + Sbjct: 526 EIVAVLVQP-RRRGNDIDLQPYSLLVRESGIV 556 >UniRef50_A6LX16 Zinc finger, SWIM domain protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LX16_CLOB8 Length = 540 Score = 93.9 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 76/555 (13%), Positives = 184/555 (33%), Gaps = 66/555 (11%) Query: 43 ENDALIATFSDGVRTQLANGQALKEAQCSCGANGMCRHRVMLVLSYQR------------ 90 E ++ DG + + ++ +CSC + +C+H VM L + Sbjct: 2 EEASIKCELPDGNSCSV--NEDIQAFKCSCPSRSICKHAVMSYLYIKNHIEEIFGESSSL 59 Query: 91 ---LCATTQSTEKEEEWDPAIWLE----ELATLPDATRKRAQALVAKGITIELFCAPGEI 143 + +++ EE+ P + E L ++ A R + K + L E Sbjct: 60 NGDSSEEMEISKQHEEFSP-DYSELLNINLKSIKTALGDREFGNIVKRMEFGLRADIKED 118 Query: 144 PSARL---PMSDVRFY-----SRSSIR--------FARCDCIEGTLCEHVVLAVQAFVEA 187 ++ ++F + I A C C LC H AV + Sbjct: 119 ALLQVEFAGEETIKFISVNGEKKKDISIKDSSIVNNALCSCKSKALCRHKAEAVIHY--- 175 Query: 188 KAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAA 247 + + + ++ + D + E +C + V++ + ++ G+++ + Sbjct: 176 ----GLYKGTLKKEEVIYLIAKDKIVSKETLESCIKEVRKTLEEIYFTGLARIPESFLDK 231 Query: 248 FNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMA 307 + + + + ++ L+ + + + + ++ + L ++ + + Sbjct: 232 LEQVSIICHNSDIPSIEKKIKALQGKLRLYINKNASFSVESFRYLLQSIYILTMAMENYS 291 Query: 308 RRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHY-GLRIWFTDPDTGS 366 ++GE+ G + ++ + L ++G W Y G +FT Sbjct: 292 DEKTLGELM--------GEHKSSYYEIPPIELAAVGASKWITESGYEGTTFYFTVEGFNK 343 Query: 367 ILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSV 426 + S S + + S G + + S+A + +G++ SS Sbjct: 344 WFTYTISRNSSYNNKNSYSRE---SCPWGIASDIESFSKARVKLINGKIN-GDFRLSSSE 399 Query: 427 VPLSP--DAWQMLSAPLRQPGIVA---LREYLRQRPPACIRPLNQVDNLFILPVAECISL 481 + S L+ + L + + NLF++ + Sbjct: 400 NSKGEIIGTTDIQSIYLKDKTFNSWKDLFSAVSNNSGLYFNEREENYNLFLIKPLKFGES 459 Query: 482 GWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVSF 541 +D +Q + + + +T+ + S + +E++ + + + P L++ V Sbjct: 460 SFDKIQQLFKMPLYDEK--EECVTIKVKYSINNKSLIEKLERMERMKNYPFMLLT-KVYL 516 Query: 542 VEGQLTLEPRVMMTK 556 E LT P K Sbjct: 517 NETGLTAVPITAYYK 531 >UniRef50_A7BS04 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BS04_9GAMM Length = 664 Score = 48.8 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 6/101 (5%) Query: 10 ELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRT-----QLANGQA 64 LT LT + V R + +V +++ D + + +G + + + Sbjct: 19 ALTWNELTNWAGTTIVSRGKTYQQGKHVSQLAKTPDGKLVAWVEGTQVYATQVGIDANGS 78 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWD 105 L + CSC C+H V +VL Y +++ D Sbjct: 79 LD-STCSCPYWDTCKHAVAVVLEYLEHVKKSKNVPTTSNDD 118 >UniRef50_C5CI01 Zinc finger SWIM domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI01_KOSOT Length = 558 Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 4/100 (4%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF----SDGVRTQLANGQ 63 L E+T + + L ++ +R G V +I D L A + Q+ Sbjct: 5 LNEMTIEDIRELVSSQVFERGESYFRQGMVLDIRESGDTLRARVKGSGDEVYSVQIKESN 64 Query: 64 ALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEE 103 A C+C +G+C+H + +L ++ S E Sbjct: 65 GRILATCTCPYDGVCKHVIATLLYAKQQEIKPSSHGAFSE 104 >UniRef50_A1SR73 SNF2-related protein n=2 Tax=Psychromonas RepID=A1SR73_PSYIN Length = 1080 Score = 47.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 39/108 (36%), Gaps = 11/108 (10%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA------LIATFSDGVRTQL-- 59 + ++TPQ ++ + R + + V ++ D + + +T Sbjct: 1 MPKITPQDISTSFGRNIIDRGTRYFKESRVLSCEYDEDKKQLHGSVKGSSETPYQTSASI 60 Query: 60 -ANGQA--LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEW 104 + + + + C+C C+H V L+L+YQ + W Sbjct: 61 KPSNKGGFIIHSTCTCPVGWNCKHAVALLLAYQADTPNYNIENSYQTW 108 >UniRef50_Q8TTH1 Predicted protein n=4 Tax=Methanosarcina RepID=Q8TTH1_METAC Length = 653 Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 13/177 (7%) Query: 109 WLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMS----DVRFYSRSSIRFA 164 W + + A +G EL P AR+ + F + + Sbjct: 16 WSDLQDWAGGKATAKGIAYQEEGRVKELKRTPTGSLVARVEGTKEYFTEIFLENGKLS-S 74 Query: 165 RCDCIEGTLCEHVVLAVQAFVEAKAQQAEF------NHLIWQMRSEHVTSSDDPFASEEG 218 C C G C+H V AV ++E Q E + + + R + T ++ Sbjct: 75 ICTCPVGHDCKHGVAAVLEYLELAEQGEEAPLASEEDPFVIRARKGY-TEAETESEEPSA 133 Query: 219 NACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVD 275 A R+Y++QL++ + I +A R L+ + V E + ++ + +D Sbjct: 134 GALREYLEQLTKRELIE-ILVAFAEKDALLGRYLRDRQNLAAEDVGEIIGEVYSELD 189 >UniRef50_D1KAQ9 Putative uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KAQ9_9GAMM Length = 577 Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 6 PELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVR---TQLANG 62 L L+ + LS +G KR + ++G + + I+ G + L + Sbjct: 2 DNLKLLSESLIEKLSGSGAYKRGVDYYQHGLIKSLHINPKGKISAEVIGSKIYHVHLHHT 61 Query: 63 QALKEAQCSCGANG---MCRHRVMLVL-SYQRLCATTQSTEKEE 102 L E C+C A+ C+H V + L Y ++ A T ++ + Sbjct: 62 STLFEGHCNCPASDNFDFCKHCVAVALSYYHQIHAGTITSGDDN 105 >UniRef50_UPI0001745294 hypothetical protein VspiD_03835 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745294 Length = 910 Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 85/522 (16%), Positives = 150/522 (28%), Gaps = 88/522 (16%) Query: 155 FYSRSSIRFARCDCIEGTLCEHVVLAV-----QAFVEAKAQQAEFNHLIWQMRSEHVTSS 209 F D IE +VL + + + ++++R Sbjct: 283 FLKIHDPEAHLTDVIEDRDGSLLVLDTGGWFRIGCPSSLMAKPDVKGAVYRIRKSGQGDL 342 Query: 210 DDP------FASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWV 263 P S G+ Q +++ L G +S+ + +A + A+ Sbjct: 343 APPLGKVPRPPSSTGSWAWQTEEEIRAALTSGVLSRQRMACDA----LARRADLKTLLEP 398 Query: 264 SESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTV 323 + L L + VD + A L + L + R EV + + Sbjct: 399 LKML--LTSEVDP-ALEHAGIRALAALMTVEDLLGGRESSANDRLR--SCEVRAANYSQI 453 Query: 324 VGSGIAGEAKLDHLRLVSLGMRC------WQDIEHYGLRIWFTDPDTGSILHLSRSWPRS 377 GSG A + +RLVSL +D +GL + D + Sbjct: 454 DGSGPAADRATYSVRLVSLASSLGLEQPMTRDAVLFGLDLIPEAVDANARTFDEWLAAGP 513 Query: 378 EQENSPAATRRLFSFQAGALAGGQIVSQAAKRS--ADGELLLATRNRLSSVVPLSPDAWQ 435 A R+ + G A Q++++ S L L + S+V P+ + Sbjct: 514 LAPAQAAVVERVLKNRLGNPAAAQVLARMLAHSDAVTRRLALQIAAQSSAVPPV-----E 568 Query: 436 MLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQ-- 493 + APL R + + V S +D + L A Sbjct: 569 GIIAPLLAD---------LARLAEPEAGGRSALPVLLGVVQRLKSPQFDPVLERLAADAS 619 Query: 494 ------------VISGEGEDNVLTLSLPASASA-----PYAVER--MAALLQQTDDPVCL 534 + S G + L + A+A +E M A + TD + Sbjct: 620 QPSSLRLKALTALSSSGGAVRSASFDLLSKAAADPINIAARIEAVRMLAAARLTDAQLAA 679 Query: 535 V------SGFVSF-------------VEGQLTLEPRVMMTKTRAWALDAETTPVAPLPS- 574 V G + +G++ + T + P+ Sbjct: 680 VLADLPMCGPLELAEWLKGLRKYGEPEQGRMIARALAATPALGSIDESTVRTLCSDWPTD 739 Query: 575 --ASVLPVPSTAHQLLI---RCQALLIQLLHNGWRYQEQSAI 611 A + P AH+ + R LL L+ R QE + Sbjct: 740 VFAGLRPSLEKAHEAIELKKRRLELLATLVKEKGRPQEGGKL 781 >UniRef50_Q5V1X9 Putative uncharacterized protein n=1 Tax=Haloarcula marismortui RepID=Q5V1X9_HALMA Length = 178 Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 14/139 (10%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIAT------FSDG 54 M P+ LT A+ L+ R + G V EI+ + + A Sbjct: 1 MRMASPD-PTLTEAAVRDLARPQSYDRGENYYDKGAVVEIARRGETIRAAVEGSQYKPYQ 59 Query: 55 VRTQLANGQALKEAQCSCGAN--GMCRHRVMLVLSY----QRLCATTQSTEKEEEWDPAI 108 VR +L + + + CSC + G+C+HRV ++L+Y + +E + DP Sbjct: 60 VRIEL-DETGVVDTACSCPYDHGGICKHRVAVLLTYVRDSDEIDQRPPVSELVADADPEE 118 Query: 109 WLEELATLPDATRKRAQAL 127 + L L ++ + A+ + Sbjct: 119 LRDVLVDLVESHPRLAEQV 137 >UniRef50_C2ALD5 DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2ALD5_TSUPA Length = 1081 Score = 44.6 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 9/106 (8%) Query: 9 LELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA------LIATFSDGVRTQLANG 62 TP+ LT A V+R+ + + G + ++ +++ + T R + Sbjct: 10 PSFTPEDLTGFFGAPTVRRAGEYVGTGLIGDLEWDDEKRLVTGVVAGTREYDARVWIEPS 69 Query: 63 QA---LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWD 105 + C+C C+H L+L + E+ + W+ Sbjct: 70 GGGWRPVRSLCTCPVALNCKHGAALLLELTAEDVEESAVEQPDPWE 115 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P33353 Putative uncharacterized protein yehQ n=61 Tax=r... 618 e-175 UniRef50_Q396D9 Putative uncharacterized protein n=1 Tax=Burkhol... 487 e-136 UniRef50_D1T1K3 Zinc finger SWIM domain protein n=1 Tax=Acidovor... 465 e-129 UniRef50_Q2SH06 Transposase and inactivated derivatives n=1 Tax=... 453 e-126 UniRef50_A4X8W9 Putative uncharacterized protein n=1 Tax=Salinis... 438 e-121 UniRef50_C3JM87 Swim zinc finger domain protein n=2 Tax=Rhodococ... 434 e-120 UniRef50_Q8F862 Putative uncharacterized protein n=2 Tax=Leptosp... 406 e-111 UniRef50_C6WE89 Zinc finger SWIM domain protein n=1 Tax=Actinosy... 390 e-106 UniRef50_C0R172 Zinc finger SIM domain protein n=1 Tax=Brachyspi... 388 e-106 UniRef50_C6PZX2 Zinc finger SWIM domain protein n=1 Tax=Clostrid... 386 e-105 UniRef50_B3ZDJ9 Zinc finger, swim domain protein n=7 Tax=Bacillu... 384 e-105 UniRef50_D0KDG6 Zinc finger SWIM domain protein n=2 Tax=Pectobac... 381 e-104 UniRef50_C1QFN1 SWIM zinc finger-containing protein n=1 Tax=Brac... 376 e-102 UniRef50_B1M3T8 Zinc finger SWIM domain protein n=2 Tax=Rhizobia... 373 e-101 UniRef50_D0SME1 Predicted protein n=1 Tax=Acinetobacter junii SH... 373 e-101 UniRef50_C0ZD36 Putative uncharacterized protein n=1 Tax=Breviba... 371 e-101 UniRef50_B4ESP7 Putative uncharacterized protein n=7 Tax=Enterob... 364 6e-99 UniRef50_C5D1M8 Zinc finger SWIM domain protein n=1 Tax=Variovor... 350 9e-95 UniRef50_A6LX16 Zinc finger, SWIM domain protein n=1 Tax=Clostri... 349 2e-94 UniRef50_C6JNG6 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 339 1e-91 UniRef50_D1S2D8 Zinc finger SWIM domain protein n=1 Tax=Micromon... 325 3e-87 UniRef50_A1SR73 SNF2-related protein n=2 Tax=Psychromonas RepID=... 98 8e-19 UniRef50_C5CI01 Zinc finger SWIM domain protein n=1 Tax=Kosmotog... 97 2e-18 UniRef50_A7BS04 Putative uncharacterized protein n=1 Tax=Beggiat... 93 4e-17 Sequences not found previously or not previously below threshold: UniRef50_A4BU68 Putative uncharacterized protein n=1 Tax=Nitroco... 71 8e-11 UniRef50_Q5V1X9 Putative uncharacterized protein n=1 Tax=Haloarc... 64 1e-08 UniRef50_C5VE60 Swim zinc finger domain protein n=2 Tax=Coryneba... 64 2e-08 UniRef50_UPI00019731C2 DNA/RNA helicase, superfamily II, SNF2 fa... 60 3e-07 UniRef50_Q3ARD4 Putative uncharacterized protein n=1 Tax=Chlorob... 60 4e-07 UniRef50_C9LWZ0 Helicase, Snf2 family n=1 Tax=Selenomonas sputig... 59 5e-07 UniRef50_Q8TTH1 Predicted protein n=4 Tax=Methanosarcina RepID=Q... 58 8e-07 UniRef50_C2ALD5 DNA/RNA helicase, superfamily II, SNF2 family n=... 58 9e-07 UniRef50_C9KQS0 Helicase, Snf2 family n=1 Tax=Mitsuokella multac... 58 1e-06 UniRef50_C7PDC7 Zinc finger SWIM domain protein n=1 Tax=Chitinop... 57 2e-06 UniRef50_C6WL98 Putative uncharacterized protein n=1 Tax=Actinos... 57 2e-06 UniRef50_D1KAQ9 Putative uncharacterized protein n=1 Tax=uncultu... 56 3e-06 UniRef50_Q0W8Z9 Putative uncharacterized protein n=2 Tax=Euryarc... 56 4e-06 UniRef50_A6L2M3 Putative uncharacterized protein n=6 Tax=Bactero... 56 4e-06 UniRef50_A4J9J5 SNF2 helicase associated domain protein n=1 Tax=... 56 5e-06 UniRef50_B9ZCU9 Zinc finger SWIM domain protein n=2 Tax=Halobact... 55 7e-06 UniRef50_UPI0001850A23 hypothetical protein Bcoam_19954 n=1 Tax=... 55 7e-06 UniRef50_A5URZ6 Zinc finger, SWIM domain protein n=1 Tax=Roseifl... 55 7e-06 UniRef50_C0VUH2 Putative uncharacterized protein n=1 Tax=Coryneb... 55 9e-06 UniRef50_Q3IPD9 Putative uncharacterized protein n=1 Tax=Natrono... 55 9e-06 UniRef50_B3CDM3 Putative uncharacterized protein n=1 Tax=Bactero... 55 1e-05 UniRef50_D2AUU1 Putative uncharacterized protein n=1 Tax=Strepto... 55 1e-05 UniRef50_C6MLY8 Zinc finger SWIM domain protein n=1 Tax=Geobacte... 54 2e-05 UniRef50_B8FNC9 Zinc finger SWIM domain protein n=1 Tax=Desulfat... 54 2e-05 UniRef50_A8S608 Putative uncharacterized protein n=1 Tax=Faecali... 54 2e-05 UniRef50_Q9K8U0 BH2912 protein n=1 Tax=Bacillus halodurans RepID... 54 2e-05 UniRef50_D2LXU9 SNF2-related protein n=1 Tax=Bacillus cellulosil... 54 2e-05 UniRef50_Q0W923 Putative uncharacterized protein n=1 Tax=uncultu... 53 3e-05 UniRef50_C2GK04 Putative uncharacterized protein n=1 Tax=Coryneb... 53 3e-05 UniRef50_A9B6V0 Non-specific serine/threonine protein kinase n=2... 53 3e-05 UniRef50_B1VT15 Putative uncharacterized protein n=8 Tax=Strepto... 52 5e-05 UniRef50_A1ANL7 Zinc finger, SWIM domain protein n=4 Tax=Deltapr... 52 6e-05 UniRef50_Q2S3X5 SWIM zinc finger domain protein n=1 Tax=Saliniba... 52 7e-05 UniRef50_C8NWP7 Putative uncharacterized protein (Fragment) n=1 ... 52 7e-05 UniRef50_Q7ULC6 Putative uncharacterized protein n=1 Tax=Rhodopi... 52 8e-05 UniRef50_C7P3C8 Zinc finger SWIM domain protein n=1 Tax=Halomicr... 52 8e-05 UniRef50_UPI00017889D0 zinc finger SWIM domain protein n=1 Tax=G... 51 1e-04 UniRef50_C5RYN7 Putative uncharacterized protein n=1 Tax=Actinob... 51 1e-04 UniRef50_C0QG17 Helicase, Snf2 family n=2 Tax=Deltaproteobacteri... 51 1e-04 UniRef50_D1AP62 SNF2-related protein n=2 Tax=Bacteria RepID=D1AP... 51 1e-04 UniRef50_Q1NL49 SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/D... 51 1e-04 UniRef50_D1BCC3 DNA/RNA helicase, superfamily II, SNF2 family n=... 51 1e-04 UniRef50_Q1VT30 Putative uncharacterized protein n=1 Tax=Psychro... 51 1e-04 UniRef50_C6M591 Putative SWIM zinc finger n=7 Tax=Neisseriaceae ... 51 2e-04 UniRef50_B0MG02 Putative uncharacterized protein n=1 Tax=Anaeros... 50 2e-04 UniRef50_C6VXP5 Non-specific serine/threonine protein kinase n=1... 50 2e-04 UniRef50_C5S5E5 Zinc finger SWIM domain protein n=1 Tax=Allochro... 50 3e-04 UniRef50_A9B3T7 Zinc finger SWIM domain protein n=1 Tax=Herpetos... 50 3e-04 UniRef50_C6N1M4 DNA helicase n=2 Tax=Legionella RepID=C6N1M4_9GAMM 50 3e-04 UniRef50_D0TG63 Zinc finger SWIM domain-containing protein n=1 T... 50 4e-04 UniRef50_B1R262 Swim zinc finger domain protein n=2 Tax=Clostrid... 50 4e-04 UniRef50_C6CWR2 Zinc finger SWIM domain protein n=1 Tax=Paenibac... 49 5e-04 UniRef50_C7H341 N-domain protein, SNF2 family n=1 Tax=Faecalibac... 49 5e-04 UniRef50_A7GQG5 Zinc finger SWIM domain protein n=1 Tax=Bacillus... 49 5e-04 UniRef50_A6TKV3 Non-specific serine/threonine protein kinase n=4... 48 7e-04 UniRef50_Q2S6W0 Superfamily II DNA/RNA helicase, SNF2 family n=1... 48 7e-04 UniRef50_C8WUV0 Zinc finger SWIM domain protein n=1 Tax=Alicyclo... 48 8e-04 UniRef50_P96714 Uncharacterized protein ywqB n=5 Tax=Bacillus Re... 48 9e-04 UniRef50_B8FRC7 Zinc finger SWIM domain protein n=2 Tax=Desulfit... 48 0.001 UniRef50_Q96ZU1 Putative uncharacterized protein ST1744 n=1 Tax=... 48 0.001 UniRef50_C5SIA7 Non-specific serine/threonine protein kinase n=1... 48 0.001 UniRef50_UPI0001BC2C91 DNA/RNA helicase, superfamily II, SNF2 fa... 48 0.001 UniRef50_C3JG27 SNF2 family helicase n=3 Tax=Rhodococcus RepID=C... 48 0.001 UniRef50_C0R4X4 SWIM zinc finger family n=2 Tax=Wolbachia RepID=... 48 0.002 UniRef50_A9VLV1 Zinc finger SWIM domain protein n=70 Tax=Bacillu... 47 0.002 UniRef50_UPI0001C43088 helicase n=1 Tax=Bacillus pseudofirmus OF... 47 0.002 UniRef50_UPI0001976ACB helicase n=1 Tax=Bifidobacterium bifidum ... 47 0.002 UniRef50_Q2BFV7 YwqB n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B... 47 0.002 UniRef50_B9LW51 Zinc finger SWIM domain protein n=3 Tax=Halobact... 46 0.003 UniRef50_C7NM99 Zinc finger SWIM domain protein n=2 Tax=Halobact... 46 0.003 UniRef50_A5V0C4 Non-specific serine/threonine protein kinase n=2... 46 0.003 UniRef50_C9YX19 Putative uncharacterized protein n=1 Tax=Strepto... 46 0.004 UniRef50_C7GAU0 Superfamily II DNA/RNA helicase, SNF2 family n=2... 46 0.004 UniRef50_Q1D1H2 SNF2/helicase domain protein n=2 Tax=Cystobacter... 46 0.004 UniRef50_B8HQN2 Zinc finger SWIM domain protein n=1 Tax=Cyanothe... 46 0.004 UniRef50_B0UB74 Non-specific serine/threonine protein kinase n=2... 46 0.005 UniRef50_B4S7J0 Zinc finger SWIM domain protein n=2 Tax=Chlorobi... 46 0.006 UniRef50_B4V2I4 Putative uncharacterized protein n=4 Tax=Strepto... 46 0.006 UniRef50_Q09DU4 Swim zinc finger domain protein n=1 Tax=Stigmate... 45 0.007 UniRef50_B6YTC8 Putative uncharacterized protein n=2 Tax=Thermoc... 45 0.007 UniRef50_B2J8R9 Zinc finger, SWIM domain protein n=11 Tax=Cyanob... 45 0.007 UniRef50_C3MCS3 Putative uncharacterized protein n=1 Tax=Rhizobi... 45 0.007 UniRef50_Q2SAU7 Protein containing SWIM Zn-chelating domain n=1 ... 45 0.008 UniRef50_B0SY81 Zinc finger SWIM domain protein n=1 Tax=Caulobac... 45 0.008 UniRef50_Q2FM81 Zinc finger, SWIM-type n=1 Tax=Methanospirillum ... 45 0.011 UniRef50_A3TJ52 SNF2-like n=1 Tax=Janibacter sp. HTCC2649 RepID=... 45 0.011 UniRef50_B1J601 Non-specific serine/threonine protein kinase n=1... 44 0.014 UniRef50_C8WZW0 SNF2-related protein n=1 Tax=Desulfohalobium ret... 44 0.020 UniRef50_B7A8M7 Zinc finger SWIM domain protein n=3 Tax=Thermus ... 44 0.021 UniRef50_B7GRW8 Zinc finger, SWIM domain protein n=3 Tax=Bifidob... 44 0.021 UniRef50_Q7NI99 Gll2284 protein n=1 Tax=Gloeobacter violaceus Re... 44 0.022 UniRef50_Q82QP8 Putative uncharacterized protein n=1 Tax=Strepto... 44 0.023 UniRef50_A8TDQ5 Zinc finger SWIM domain protein n=1 Tax=Methanoc... 43 0.023 UniRef50_C6D0B9 Zinc finger SWIM domain protein n=1 Tax=Paenibac... 43 0.028 UniRef50_B0PH91 Putative uncharacterized protein n=1 Tax=Anaerot... 43 0.031 UniRef50_B5EQ57 Non-specific serine/threonine protein kinase n=4... 43 0.035 UniRef50_A0L971 Zinc finger, SWIM domain protein n=1 Tax=Magneto... 43 0.039 UniRef50_A9GFG7 Putative uncharacterized protein n=1 Tax=Sorangi... 43 0.039 UniRef50_UPI00016C3DDA SNF2-related protein n=1 Tax=Gemmata obsc... 43 0.043 UniRef50_UPI00017453E0 probable helicase n=1 Tax=Verrucomicrobiu... 42 0.052 >UniRef50_P33353 Putative uncharacterized protein yehQ n=61 Tax=root RepID=YEHQ_ECOLI Length = 614 Score = 618 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 614/614 (100%), Positives = 614/614 (100%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLA 60 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLA Sbjct: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLA 60 Query: 61 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT 120 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT Sbjct: 61 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT 120 Query: 121 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA Sbjct: 121 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 Query: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP 240 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP Sbjct: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP 240 Query: 241 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL 300 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL Sbjct: 241 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL 300 Query: 301 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT 360 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT Sbjct: 301 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT 360 Query: 361 DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR 420 DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR Sbjct: 361 DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR 420 Query: 421 NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS 480 NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS Sbjct: 421 NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS 480 Query: 481 LGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVS 540 LGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVS Sbjct: 481 LGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVS 540 Query: 541 FVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLH 600 FVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLH Sbjct: 541 FVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLH 600 Query: 601 NGWRYQEQSAIGQA 614 NGWRYQEQSAIGQA Sbjct: 601 NGWRYQEQSAIGQA 614 >UniRef50_Q396D9 Putative uncharacterized protein n=1 Tax=Burkholderia sp. 383 RepID=Q396D9_BURS3 Length = 744 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 227/692 (32%), Positives = 333/692 (48%), Gaps = 84/692 (12%) Query: 4 LRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-ATFSDGVRTQLANG 62 +R +LLELTP+ALTAL+NAGFVKR+ K++ G +P ++ + D + A+F DGVRT L G Sbjct: 5 MRDDLLELTPEALTALANAGFVKRAQKDVAAGALPALAVDGDGTVHASFDDGVRTSLPPG 64 Query: 63 QALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWD----------PAIWLEE 112 + L++A CSC A+GMCRHRVMLVL+YQ ++ + + D P +E Sbjct: 65 RTLRDAACSCTASGMCRHRVMLVLAYQANMQANEAVDATDSADVRAGGDGKTEPVDTRDE 124 Query: 113 LA------------------------------------------TLPDATRKRAQALVAK 130 A + + ++A + A Sbjct: 125 AARNPNDVARDGPDFAPPDDDTSGTSSADRAWSPADFDDAALAASFAPSVLEQAVRMAAA 184 Query: 131 G--ITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAK 188 + ++ + P ARLPM VRF+SR S+ ARCDC +G+ C HVV+AV AF +A Sbjct: 185 RPVVAVQPWAGAQGSPVARLPMCTVRFFSRRSLAHARCDCRQGSGCAHVVVAVWAFRQAG 244 Query: 189 AQQAEFNHLIWQMR---SEHVTSSDD--PFASEEGNACRQYVQQLSQTLWLGGISQPLIH 243 A + I ++R + S DD P + +A + L LWL G SQP I Sbjct: 245 APADGVSEAIVEVRPPAGDEGESDDDRSPLRDDAAHALIADLDTLVHALWLDGSSQPPIA 304 Query: 244 YEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCA 303 A W+WV ++L + V A HAR+S + + LA L +RL A Sbjct: 305 LAARVESLRGRLRERGWQWVDDALDEAWQLVHAQHARSSRFEPLRLVRVLAELWARLRAA 364 Query: 304 QEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPD 363 + A + VP R ++G G+ GE +LDHLRLVSLG+ W D G + F DPD Sbjct: 365 RSAATQRDGA---AVPARQMLGIGVKGEVELDHLRLVSLGVELWADDAEEGASVLFADPD 421 Query: 364 TGSILHLSRSWPRSEQ-----ENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLA 418 T +++ L+R+WPR+ A RR+ F +A GQ+V++ AKR A+G + +A Sbjct: 422 TQTVMVLTRNWPRAADVAAGGRAPDLAGRRVAGFPLRQIAAGQVVTKTAKRRANGAVDIA 481 Query: 419 TRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVD---------- 468 R + V+PLSP +W L+AP+RQPGI AL +LR P +RP + Sbjct: 482 AGVRQTGVLPLSPKSWDDLAAPIRQPGIAALVAHLRDALPDFVRPRQAANGAAAGAAGSL 541 Query: 469 NLFILPVAECISLGWDSSRQTLDAQVI------SGEGEDNVLTLSLPASASAPYAVERMA 522 ++ S+ WD++ Q L A++ + G ++VL L+LP A AP AV+ +A Sbjct: 542 HVVAFEPMVVRSVHWDAAAQVLHARLAQGEAGAADAGGEDVLHLALPHRAVAPGAVDALA 601 Query: 523 ALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPS 582 L + ++G V G + P ++T RA L E PLP A Sbjct: 602 RALSGEWGALRALAGTVRLHAGTAVMRPLAVLTAQRAVVLQTEAAAPQPLPLAGGREPSP 661 Query: 583 TAHQLLIRCQALLIQLLHNGWRYQEQSAIGQA 614 L ALL + L G R+Q A+ +A Sbjct: 662 ALVALAEDTLALLAEWLRQGMRHQGGGAVERA 693 >UniRef50_D1T1K3 Zinc finger SWIM domain protein n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T1K3_9BURK Length = 730 Score = 465 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 214/678 (31%), Positives = 318/678 (46%), Gaps = 72/678 (10%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA-LIATFSDGVRTQLANGQ 63 R +LLELT +ALTAL+NAGFVKR+ K++ G +P ++ E D ++A F+DG RT+L G+ Sbjct: 7 RADLLELTAEALTALANAGFVKRAQKDVAAGLLPRLATEADGTVVAEFADGARTRLPPGR 66 Query: 64 ALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEE--------------------- 102 L++A C+C A+GMCRHRVMLVL+YQ+ A + + Sbjct: 67 TLRDAACTCAASGMCRHRVMLVLAYQQDHARNAAPGAGDGSDSGGDAEAAVAAPAPAAEG 126 Query: 103 EWDPAIWLEEL--ATLPDATRKRAQALVAKG--ITIELFCAPGEIPSARLPMSDVRFYSR 158 W PA + + A++ + ++A L A + ++ + +P P+ARLPM VRF+SR Sbjct: 127 PWSPAHFDDAAVAASIAPSVLEQAARLAASRPVVAVQPWQSPSVPPAARLPMCTVRFFSR 186 Query: 159 SSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEG 218 SS+ ARCDC +G+ C HVV+A+ AF A E + E D P A+ E Sbjct: 187 SSLVHARCDCQQGSGCAHVVVALWAFRAAG----ELAPGGDEAMVEVAPRGDAPPAAPES 242 Query: 219 N--------------------ACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETC 258 R+ + +L LWL G SQP + A F A+ Sbjct: 243 GGPAPVAAAPPPGRLRAPQALQLREALDELLLALWLEGTSQPPMALAARFGAVRAQAQAL 302 Query: 259 NWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGE---V 315 WRWV + L +L + + AR+S + L A L +R A Sbjct: 303 GWRWVDDGLAELSLLLQSQQARSSRDDPARTLQVAAELWARPRAAAHAEDASGQPPGTTR 362 Query: 316 PPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWP 375 PP+ V+G G+ GE LDHL+LVSLG W D G + F DPDT ++ L R WP Sbjct: 363 PPLHASQVLGIGVKGEVALDHLKLVSLGAALWADDAAEGASVLFADPDTQTVTVLERQWP 422 Query: 376 RSEQ-ENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAW 434 R E + RR+ F +A GQ++++ A R A+G + + + R + V+PLSP AW Sbjct: 423 RGEGGPGQALSGRRVAGFPLRQVAAGQVITKTATRRANGAIDIGSGARQTGVMPLSPTAW 482 Query: 435 QMLSAPLRQPGIVALREYLRQRPPACIRPLNQVD----------NLFILPVAECISLGWD 484 L APLRQ + +L E LR PP ++P ++ P WD Sbjct: 483 DDLGAPLRQGSVESLVERLRNAPPEFVQPRQAATGAAGGTSGPLHVVAFPGMHADECTWD 542 Query: 485 SSRQTLDAQVI--------SGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVS 536 ++ Q L A+++ + + L L+LP A+AP AV+ +A L + V+ Sbjct: 543 AAAQVLHARIVRRDGDGDGAADAASAALHLALPHRAAAPGAVDALARTLSGEWGSLRAVA 602 Query: 537 GFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLI 596 G + +G+ ++P ++T RA E L + P LL L Sbjct: 603 GPAALHQGRAVMQPLALLTDQRAVVPQIEAPAAQALALRTASETPQGVQALLGATSQWLA 662 Query: 597 QLLHNGWRYQEQSAIGQA 614 Q L G R+Q +A Sbjct: 663 QWLRQGLRHQPGGLETRA 680 >UniRef50_Q2SH06 Transposase and inactivated derivatives n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SH06_HAHCH Length = 661 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 149/639 (23%), Positives = 247/639 (38%), Gaps = 53/639 (8%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPE------ISHENDA-LIATFSD 53 M R +LL +T Q L SN G VKR+ KELE + +S ++ L A + D Sbjct: 1 MTMRRDDLLSMTLQDLEGYSNRGTVKRAQKELEKLSAERDADQTLLSEDDAGNLAAHWPD 60 Query: 54 GVRTQLANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEEL 113 G TQL +A + +C+C + CRH + LVL+YQ + A + W+P +EL Sbjct: 61 GAITQLGANEAFPQGRCTCPSTTTCRHLITLVLAYQEMRAEAAESPVPVAWNPGDISDEL 120 Query: 114 --ATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEG 171 A ++A +G+ EL + + VRF + R+ + D E Sbjct: 121 MAKAYTPAQIRKANKWFQEGVLAELALSEKPLAIIETIGVAVRFLAPGDPRYVQSDGDEE 180 Query: 172 TLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQT 231 ++A+ AF L + +V++ P E Q V L Sbjct: 181 LTAVAAIIAILAFR----------RLPQGQTAGYVSTCPRPPVEPE---ALQSVGDLFVR 227 Query: 232 LWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLH 291 L GG+SQ RA + + +W W + +L +D ++ R ++ + + Sbjct: 228 LLQGGLSQLEPGLRDKLRRAARRLQAHDWLWPASHCERLVEQIDRYNRRDGSFSPSQAIR 287 Query: 292 QLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIA-GEAKLDHLRLVSLGMRCWQDI 350 + R P P V G G + R + LG R D Sbjct: 288 HMGEFLCRQRALA--------SPTLPAPEVVVRGGGPKRARERTGKSRYIGLGCRMRVDH 339 Query: 351 EHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAA----TRRLFSFQAGA--LAGGQIVS 404 ++ DTG+++ L + S+ E++P + +RL+ Q GQ+++ Sbjct: 340 GGVFAEVFLQSVDTGALVILEKRQKTSKDEDAPLSYYQIAQRLYVLQHSIRDYGKGQVLT 399 Query: 405 QAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPL 464 AK S D + T R +++ P S W L L L L R R L Sbjct: 400 SGAKLSLDNRM---TFGRQTALNPQSYQ-WSTLRQNLLMEDFDELLRRLASRLAGPFRSL 455 Query: 465 NQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAAL 524 +N + L VA + +D++ Q + A ++ +G + L+ P S E + L Sbjct: 456 KANENFYALKVAGVANPRFDTASQCVTADLVDAKGAR--MALAFPYSTRGAGGAEALLQL 513 Query: 525 LQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAE--------TTPVAP-LPSA 575 L+ + V+G V+ L +EP ++ A+ + TPVA LP+ Sbjct: 514 LRMHGSHISYVAGSVTEHTHGLMIEPVSVVYSVNQQAMMLQPYVDDSLPGTPVAHALPAE 573 Query: 576 SVLPVPST-AHQLLIRCQALLIQLLHNGWRYQEQSAIGQ 613 + + T +LL + LL +L G R Q Sbjct: 574 NRFALARTALSRLLEQVDQLLCDILITGLRRASPGVQSQ 612 >UniRef50_A4X8W9 Putative uncharacterized protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4X8W9_SALTO Length = 674 Score = 438 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 153/635 (24%), Positives = 247/635 (38%), Gaps = 48/635 (7%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQA 64 R +LL LTP +L AL+N G VKR+ KEL+ I + + TF DG L G Sbjct: 9 RGDLLALTPDSLAALTNRGLVKRATKELDQAAPAVIVDGDGTVRGTFPDGTAASLPRG-G 67 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLC----------------------ATTQSTEKEE 102 L CSC A +CRH V L+L+YQR A + Sbjct: 68 LDAGACSCDATTICRHLVGLILAYQRQHTAAGLLADPGPQPRSPIDVPSAAPPNTGTGPA 127 Query: 103 EWDPAIWLEEL--ATLPDATRKRAQALVAKGITIELFCAPGEIPS--ARLPMSDVRFYSR 158 W P + +E + + A+ + G + P L + VRF Sbjct: 128 AWSPGSFTDEQLTSRVGARLMAAARRVERAGYLARVRRPTSTDPVPTVELGSATVRFLVP 187 Query: 159 SSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEG 218 + F D + T + + LAV AF A E + ++R E P + Sbjct: 188 HDLGFVHTDAVADTRDDVLALAVWAFRVAD----ERAPGLAEVRVEVGG----PANDDGS 239 Query: 219 NACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFH 278 + + L+ + G AA QA + RW +L L + A+ Sbjct: 240 GSGIEATLLLADRVLRDGAVHVGTGIAAAVAEQQQALDAVGLRWPLLALGDLADHLTAYR 299 Query: 279 ARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLR 338 R++ Y + L++R A + G + + V+G+ A E L +R Sbjct: 300 ERSARYRPDTLAGLILELHAR-----HRAVCNGGGSLRAL----VLGTDEAAETPLRQVR 350 Query: 339 LVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALA 398 L SLG R + + I+ +T ++L L RSW E + + A RR+ ALA Sbjct: 351 LDSLGCRVSAVGQQRTVEIFHAHAETATVLVLRRSWE-GEADGAALARRRIAGTTVDALA 409 Query: 399 GGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPP 458 G +V+++A RSA + LAT + V S W L L I AL L PP Sbjct: 410 TGNVVTESAVRSASRTVRLATSRLAQTTVNPSQGHWDALPKALVVRDIGALGVELDALPP 469 Query: 459 ACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAV 518 +RP + + + ++ VA+ +++ + +Q LDA ++ G +T + + +AP + Sbjct: 470 RMVRPRIEAELVRVVTVADVLTVNYSPGQQRLDAVIVDAHGTRATVTAT--HTVAAPGRL 527 Query: 519 ERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVL 578 + +AA L + V VSG V G + ++P + D + + L Sbjct: 528 DAVAAALNGKNGRVRYVSGIVHRSAGAVVIDPLALAVDGAMVVPDLAPSVASHLGFGGGD 587 Query: 579 PVPSTAHQLLIRCQALLIQLLHNGWRYQEQSAIGQ 613 L + LL + H G + + + Sbjct: 588 EPSQLVAALQE-SRTLLTTVAHQGLLHLPATYPDR 621 >UniRef50_C3JM87 Swim zinc finger domain protein n=2 Tax=Rhodococcus erythropolis RepID=C3JM87_RHOER Length = 644 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 150/617 (24%), Positives = 250/617 (40%), Gaps = 42/617 (6%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQA 64 RP+L LT AL ++N G VKR+ + PE+ ++ ++ + DGV T L G Sbjct: 7 RPDLAALTDDALALVANRGLVKRAARMFAE-ETPELLVTSERILVRYGDGVETSLPAGIP 65 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEEL--ATLPDATRK 122 EA C+CGA+ +CRHRV LVL Y+ A S+ +W P + +E A L A Sbjct: 66 FSEASCTCGASSVCRHRVGLVLVYR---ANHGSSFDHIDWTPGEFDDEALEAFLGGAVLA 122 Query: 123 RAQALVAKGITIELFCAPGEIPSAR--LPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 RA +G + A G P R LP VRF + A T E + LA Sbjct: 123 RANRTRLQGYQATVHRARGTDPVVRVELPHCTVRFLVPHELSHAHSSASAHTTAEAIALA 182 Query: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP 240 V A A + H+ RS V +D + L++T+ + G+S Sbjct: 183 VWAVRAADESGTDHVHVG---RSSVVRDADRS----------ALARALARTILVDGLSTT 229 Query: 241 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRL 300 A R + E + W++++ +L ++A+ R + ++ +A +++R+ Sbjct: 230 TAVQHATAVRDTRTIEAGSAIWLADACIELTDQIEAYSMRHAGHSRTRVAMIIAEIHARV 289 Query: 301 NCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT 360 + V TV+G+ GE L RL+SLG R + I+F Sbjct: 290 ELGE---------SVDSSLAGTVLGTETPGETPLRRSRLISLGARVTATGDSTTADIYFA 340 Query: 361 DPDTGSILHLSRSWPRSEQE---NSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLL 417 +PD+ ++ +S W E +TRR+ ALA +++++A R A+ + L Sbjct: 341 EPDSDAVFLMSHDWSSESDEALSGYAISTRRIAGSTVAALASSTVLTESAVRRANHRIRL 400 Query: 418 ATRN-RLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVA 476 + +S++PL DAW+ + +RPP+ R D + ++ + Sbjct: 401 GRKGIGRTSILPLGVDAWEKSID--VVDDYAEMHRRFIERPPSFARARLTTDGVGVMRID 458 Query: 477 ECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVS 536 IS + + Q +V G N+ +S+ A AP A++ M + VS Sbjct: 459 SVISTDYAPAEQIWTMRVGD--GRGNLAQVSVVHRAQAPGAIDAMVRAMS---ARPRAVS 513 Query: 537 GFVSFVEGQLTLEPRVMMTKTRAWALDA-ETTPVAPLPSASVLPVPSTAHQLLIRCQALL 595 G ++ G L + P + D E A + A L ++L Sbjct: 514 GRLTVRAGALWMTPFAVACDLGVIVPDLEEGLGSATMTRAVTTGGVDAIDSALEGALSVL 573 Query: 596 IQLLHNGWRYQEQSAIG 612 + H G R + I Sbjct: 574 ADIAHRGLRNAAEPTIS 590 >UniRef50_Q8F862 Putative uncharacterized protein n=2 Tax=Leptospira interrogans RepID=Q8F862_LEPIN Length = 644 Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 113/574 (19%), Positives = 235/574 (40%), Gaps = 51/574 (8%) Query: 4 LRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA-LIATFSDGVRTQLANG 62 +R ++L L+ Q L L++ G V R+LK++E+G + D + + D V L Sbjct: 1 MRQDILSLSLQELEVLTSKGTVNRALKDIESGAKGKWKETEDGNVEVVWEDSVICVLPGS 60 Query: 63 QALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEEL--ATLPDAT 120 ++E+ C+C + G+CRH + +++YQ+ S + W+P +E + + ++ Sbjct: 61 VPIQESSCTCSSTGVCRHIIRTIVAYQK---RNISDKPNLSWNPGSISDESLHSFISASS 117 Query: 121 RKRAQALVAKGITIELFCAPGEIPSARLPM-SDVRFYSRSSIRFARCDCIEGTLCEHVVL 179 +A+++ GI +EL ++P A++ V F + IR+AR DC + + + Sbjct: 118 FTKAKSIFNSGIAVEL--DRTDVPVAKIHGLGTVHFPVPNDIRYARADCKGSLGEQIIAI 175 Query: 180 AVQAFVEAKAQQAEFNHLIWQMR-SEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGIS 238 AV +F ++ + I +++ S H+T + E + G Sbjct: 176 AVWSFRLTHLKKEFVSTNIREIKISSHITDRANTILKE---------------IIQYGFQ 220 Query: 239 QPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNS 298 H + + ++ W SE L +L+ + S ++ + ++ L Sbjct: 221 GVSEHLKDRLFQLKRSCLEEGLLWPSEILSELQEEYSKYLLHDSLFDPDQVVYLLGEWII 280 Query: 299 RLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIW 358 R++ +++ G +P + + G ++L L+ LG + + + + Sbjct: 281 RMDAL-----KENKGAIPSL---VISGDTKTYSSELIVRSLIGLGSGIKVLQKGFVVLSY 332 Query: 359 FTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGA----LAGGQIVSQAAKRSADGE 414 F DP + IL S+ + +E P + F+ G IVS + K++ G+ Sbjct: 333 FADPKSDKILLYECSFEKHTEE--PFHSIGNFTVFKGIPLHNFGKSSIVSSSIKKTTSGK 390 Query: 415 LLLATRNRLSSVVPLSPDAW--QMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFI 472 L + S+ + L+P + + LS + + L ++PP + P N F+ Sbjct: 391 L------QFSNKLTLNPQTFFFESLSENILSNNFNETIKLLLEKPPRPLGPRWAAGNFFV 444 Query: 473 LPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPV 532 V +D+ Q ++ ++ G N+ + LP A +E + L D + Sbjct: 445 FKVERFTQPHFDNILQQINIELEDQNG--NIAYVQLPYYTRASDGIENLKHALG--DSHL 500 Query: 533 CLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAET 566 V G + G+L ++P + + + Sbjct: 501 RYVCGVANVASGRLYIKPVSFVIEQGGNRTMLQP 534 >UniRef50_C6WE89 Zinc finger SWIM domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WE89_ACTMD Length = 637 Score = 390 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 154/619 (24%), Positives = 247/619 (39%), Gaps = 36/619 (5%) Query: 3 SLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-ATFSDGVRTQLAN 61 R +LL LT +AL L+N G VKR+ +E+E G PE+ +D + F DGV L Sbjct: 1 MRRADLLALTSEALVDLANRGLVKRATREVEAGAGPELGVADDGAVTGVFPDGVTAVLPP 60 Query: 62 GQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEE--LATLPDA 119 G L A CSCGA G CRHR+ +VL+YQR + E E W P + +A + Sbjct: 61 GAGLDAASCSCGARGACRHRIAVVLAYQREHGGAE-EEVFEPWSPGSVPDAELVAAFGER 119 Query: 120 TRKRAQALVAKGITIELFCAPGEIPSA--RLPMSDVRFYSRSSIRFARCDCIEGTLCEHV 177 A+ ++ G+ + L A P A LP + VRF + +A D + V Sbjct: 120 AVAAARRVLRSGVPVVLRRASAGDPVAVAELPSATVRFLVPGELGYASTDAAALRRDQLV 179 Query: 178 VLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGI 237 LAV AF EA Q + +R + S+ + + + + ++ Q L G + Sbjct: 180 ALAVLAFREADEQ----GFVDPVVRFDAGGSAGPGGSGDGPDPLAEALELTGQLLREGAV 235 Query: 238 SQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALN 297 +AA R+ + W + ++ +L + A+ AR + + +A + Sbjct: 236 HTGP-VLDAALERSRRDLTAAGMHWPAAAVGELAEQLAAYRARGARHRVERVAELVAEVR 294 Query: 298 SRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRI 357 +R P TV+G A E + +RL SLG R E + Sbjct: 295 ARARATG--------------PRSTVLGFDEAAETPMRRVRLTSLGCRVTGTGEDRTAEV 340 Query: 358 WFTDPDTGSILHLSRSWPRSEQENSPA---ATRRLFSFQAGALAGGQIVSQAAKRSADGE 414 +F D D +L L W E + RRL ALA +VS++A RS Sbjct: 341 FFADGDG--VLVLRHRWQLGADERPTGHDLSGRRLSGTTLAALAAANVVSESAVRSPSRV 398 Query: 415 LLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILP 474 + L + V AW L AP+ + A L PP +R + +++ ++ Sbjct: 399 VRLTASRVAKTSVTPLGSAWTGLRAPVLVRDLAAAGAELAALPPRVVRARVEAEHVRVVE 458 Query: 475 VAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCL 534 VA S+G+D Q L+A V G ++ + ++ A A T Sbjct: 459 VAAVRSIGYDPGAQRLEAVVADAAGTTALVRATYRSTTPAALDALARALAAGPTH----- 513 Query: 535 VSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQAL 594 VSG +S G+L + P ++T D ++ ++L +L Sbjct: 514 VSGALSRTGGRLVITPFAVLTPDGPVVPDL-AGGDVGGLVGGLVVGRDVLAEVLESALSL 572 Query: 595 LIQLLHNGWRYQEQSAIGQ 613 + H G + + G+ Sbjct: 573 CAEAAHRGLEHLAATMPGR 591 >UniRef50_C0R172 Zinc finger SIM domain protein n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R172_BRAHW Length = 563 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 73/586 (12%), Positives = 191/586 (32%), Gaps = 73/586 (12%) Query: 19 LSNAGFVKRSLKELENG-----NVPEISHENDALIATFSDGVRTQ-LANGQALKEAQCSC 72 ++N G RS+K+++N +I D + T G + + + N + +K ++CSC Sbjct: 1 MTNKGIYNRSVKDIDNIINNSPEKIKIEETEDKIKVTIDTGEKIEVILNDEDIKSSKCSC 60 Query: 73 GANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPA------------------IWLEELA 114 + +C+H +M +L + L + E + I +E+ Sbjct: 61 PSKDICKHIIMSLLYIEHLDTENKENESNTDTAENNTEIEIKEENNTFDEVKNISYDEIK 120 Query: 115 TLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDV--RFYSRSSIRFARCDCIEGT 172 L + AL IE + +P +V F + SI+ A C C + + Sbjct: 121 KLSTK-KNFEYALDRLDDNIEADIEEKAMLEINIPEENVIIYFPKKDSIKKAVCSCKDSS 179 Query: 173 LCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTL 232 LC H ++A+ + + E ++ ++ ++ + + Sbjct: 180 LCAHKIIAILKYKQMYNSLEEIKEDDKEI----------------DENILKFSKEFIENI 223 Query: 233 WLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQ 292 + G+ + + +++ R + S+D+ + + +N Sbjct: 224 FEKGLYSCSEKDFDIAEQLSVKLQVKEMPELAKMFRSISESIDSMINKHASFNKLFTFAI 283 Query: 293 LAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEH 352 L+ L + + ++ ++D+ + + + I ++ LV LG W Sbjct: 284 LSRLYNTIKVIEKA-KQDNDNKTVKLLTGEIRSKYINRKSA----ELVGLGSYPWISSTG 338 Query: 353 Y-GLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKR-- 409 Y G + + +T + S P + + +++ I + + Sbjct: 339 YLGASAYLYNLNTKKLSFFSYVIPTFYDNSKISYDDVRSNYRKKIHFENNISIEEISKYK 398 Query: 410 ------SADGELLLATRNRLSSVVP--LSPDAWQMLS-----APLRQPGIVALREYLRQR 456 + E +++ S ++ + + + L ++ Sbjct: 399 LKFINYKVNNEERISSSKFTSVILNDRMDYKLLEEIKNSKNNEELFAENYDDIKN--IDF 456 Query: 457 PPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVIS--GEGEDNVLTLSLPASASA 514 ++ + I + ++ Q L +++ E ++ LTL++ ++ Sbjct: 457 KYDYFNKNDRSK-IIIAKFQIIENQEFNKIEQILYFDIVNNYEEDDEERLTLNVKYTSIH 515 Query: 515 PYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAW 560 ++ + D + + + + P ++ Sbjct: 516 SNGIKYIMNYKNSNIDKDRFIV----LEKTKYYIRPISIINANAVI 557 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 49/120 (40%), Gaps = 4/120 (3%) Query: 6 PELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQAL 65 E+ ++ + LS + +L L++ +I + I + V ++ Sbjct: 109 DEVKNISYDEIKKLSTKKNFEYALDRLDDNIEADIEEKAMLEINIPEENVIIYFPKKDSI 168 Query: 66 KEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQ 125 K+A CSC + +C H+++ +L Y+++ ++ +E + D E + + Sbjct: 169 KKAVCSCKDSSLCAHKIIAILKYKQMY----NSLEEIKEDDKEIDENILKFSKEFIENIF 224 >UniRef50_C6PZX2 Zinc finger SWIM domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZX2_9CLOT Length = 559 Score = 386 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 86/589 (14%), Positives = 195/589 (33%), Gaps = 71/589 (12%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLA 60 + S + + + L +SN G R+ K+L + E +++ + D Sbjct: 8 LKSFGKFIKTIDKEYLIGISNKGITNRAEKDLAKVSNLEYETKDEGIEFKIDD---ITCF 64 Query: 61 NGQALKEAQCSCGANGMCRHRVMLVLSY---QRLCATTQSTEKE--------EEWDPAIW 109 + +++ QCSC + +C+H +M L Q+ +++E E + Sbjct: 65 ISEDIQKYQCSCPSRSICKHVIMCYLYLIENQKEIFKLENSEDECEEKKEEFLKLKEFKI 124 Query: 110 LEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCI 169 + + + + + GI + G I D+ I + C C Sbjct: 125 EDIKKKIGEKSLGNIVKRIEYGINFTIK--EGSIIEVNFNDEDILVKLLDDIENSICSCK 182 Query: 170 EGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLS 229 LC H A+ + E +L ++ + T+S+ F +E ++Q Sbjct: 183 SKELCTHKAEALILYKL------EKGYLSFEKLKDF-TASELLFNRDEMKKAAVKLRQTI 235 Query: 230 QTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGEC 289 + +++ G+S+ I N +S+R +R + + + + A Sbjct: 236 EDIFITGLSRTPITVLDKLNSIAVICHNYELPNFEKSIRDIREEFLLYFNKNASFTAKNL 295 Query: 290 LHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQD 349 L++L + +R + + + + + G + ++ + L G W+ Sbjct: 296 LNKLTNVYTRTIALENIEDLNKLSSLV--------GEFKSSYYEIPLVELHGFGAEKWKS 347 Query: 350 IEHY-GLRIWFTDPDTGSILHLSRSWPRSEQ---------ENSPAA--------TRRLFS 391 Y G+ +F + I + + P E +P ++ F Sbjct: 348 KSGYEGITYYFLENKRNQIYTYTHALPTYYDNVKITRNFNEAAPWELNCSVQELSKITFK 407 Query: 392 FQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALRE 451 G + G +S +++ + G ++ + + + D WQ L + Sbjct: 408 LVHGKINSGNRISSSSE--SKGTIIDKSHFTKLNAENFTYDNWQQLLEKIFLND------ 459 Query: 452 YLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPAS 511 N+ NL L + E +D+ Q + E +N+ + + S Sbjct: 460 ----------NEKNENYNLVFLNINEFGESNFDNVTQEFSLPIYDKE--NNLCKILVKFS 507 Query: 512 ASAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAW 560 + + + + L++ + G V + +L P Sbjct: 508 SESKNLIRTLERLVKYKKTHL--FMGKVYIDKEKLMFYPISYYDDAGEV 554 >UniRef50_B3ZDJ9 Zinc finger, swim domain protein n=7 Tax=Bacillus RepID=B3ZDJ9_BACCE Length = 545 Score = 384 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 84/565 (14%), Positives = 186/565 (32%), Gaps = 60/565 (10%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKE 67 L + L A+SN G KR++K+L +I E D + D ++ Sbjct: 11 LSSIDETYLIAMSNKGTYKRAMKDLAVVKNIKIDLEEDIVQIHLDDETTVTFTGD--IRS 68 Query: 68 AQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQAL 127 C+C A +C+H +M +L +++ ++ + ++ + ++ + + A+ + Sbjct: 69 YSCTCEARSICKHVMMALLEAKKMYEGEEN--IKVDFSALLNVDVRNIVSEKMW--AEMM 124 Query: 128 VAKGITIELFCAPGEIPSARLPMS--DVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFV 185 K ++ P VRF + S+ A C C +C H V A+ + Sbjct: 125 FRKTFHQKIVLEEEGALIVSFPEESITVRFLTAESVADAICTCKTEGICRHKVEAIYWYQ 184 Query: 186 EAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYE 245 ++ +H Q++ + S E G+++ Sbjct: 185 ----KERGISHETKQVQCLIIESDKLSIFKEMIEQIVHL-----------GLTRLTEKTI 229 Query: 246 AAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQE 305 + A + + R+L + + + + + L+A+ + ++ Sbjct: 230 YEIEQLSVKARSLKLAKLENLFRKLGTDIRLYRMKHASFQMASYRQTLSAIYEYIMLLEK 289 Query: 306 MARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHY-GLRIWFTDPDT 364 ++S + ++ L L + G WQ Y G+ +F + + Sbjct: 290 HRLQESP--------------YRSEYYEVPPLTLHAFGAAGWQTKSGYVGVTYYFYNREQ 335 Query: 365 GSILHLSRSWPRSEQENSPAATRRLFSFQ--AGALAGGQIVSQA------AKRSADGELL 416 + ++S P E S + L Q G G +S++ AK + D +L Sbjct: 336 EKWITYTQSRPMFY-EGSNITSEDLHEQQVPWGIAGKGNELSRSCLWLKHAKLNVDFQLS 394 Query: 417 LATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVA 476 +++ + + WQ L L + ++ R +F + Sbjct: 395 SSSQTVGEAGGKTNVTEWQSL----FITTWEELLKKVKAN-----RLETSKQGVFCIEFT 445 Query: 477 ECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVS 536 E + Q +I +G +L L + + + + L V + Sbjct: 446 EMEEWKFQKKEQKWIIPLIDKKG--EILQLQMMKQPENEWTIRLVKIYLDSL--HVKRML 501 Query: 537 GFVSFVEGQLTLEPRVMMTKTRAWA 561 +L + P ++ T+ Sbjct: 502 VHPYQEGTKLVVTPIILYTEVGEII 526 >UniRef50_D0KDG6 Zinc finger SWIM domain protein n=2 Tax=Pectobacterium RepID=D0KDG6_PECWW Length = 690 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 100/575 (17%), Positives = 187/575 (32%), Gaps = 48/575 (8%) Query: 9 LELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF-SDGVRTQLANGQALKE 67 L AL+ +N G ++R+ K+L V + + F SDG + L Q ++ Sbjct: 8 LNYDEDALSVFANVGLLRRAKKDLAGDKV--MLVTDAGQEGHFASDGQQVVLGA-QGIQT 64 Query: 68 AQCSCGANGMCRHRVMLVLSYQRLCATTQST----EKEEEWDPAIWLEELATLPDATRKR 123 A+C C A G C+H + VL Q E P L E+ L + Sbjct: 65 ARCDCPATGCCKHILAAVLWLQTHAERGTEQAAVLSAETVAPPIDVLAEILQLDPDVLMK 124 Query: 124 AQALVAKGITIELFC--APGEIPSARLPMSDVRFYSR---SSIRFARCDCIEGTLCEHVV 178 V A + + LP ++ Y S + + + G L + + Sbjct: 125 QVGKVQTRQAARFVQMWAEESVRTESLPNQ-LKIYLPTLESPVIYLAGTGMTGMLSDFLR 183 Query: 179 LAVQAFVEAKAQQA--EFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGG 236 A A + E + S + + + A + + G Sbjct: 184 EKQPALHLATIARLFAENQRVWPWPEDCFAQESSERALNADEQALITMLNAFIHDVMNQG 243 Query: 237 ISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAAL 296 +S + +A ++ LR L V R + L +A L Sbjct: 244 LSHISKSSARQLHLLNMSARAEGLPRLAGYLRTLSGQVSLLADRHYSLEERDVLLFIARL 303 Query: 297 NSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQD-IEHYGL 355 ++ L ++ + + V + + + L LV LG + W G Sbjct: 304 SAYLFQLEQASPER-----LLLLRGQVRRQ---YQQQPEALSLVPLGAQWWVTEGGARGA 355 Query: 356 RIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQA------AKR 409 F + + +LH +++ +++ + + + ++ QA G+ + +A + Sbjct: 356 TFSFWESENQQLLHCTQAR--ADRHDVTFSRQGVWQGQAMWKQLGEHIMRAPFTLHHPRF 413 Query: 410 SADGELLLAT---RNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQ 466 S DG+L N + P + A +A + L Y Q +PL Sbjct: 414 SDDGKLAAGGESYANLDGTPWPAAAYAQCKSTAGIA--DWSQLSRYFEQENQDYPQPL-- 469 Query: 467 VDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQ 526 +L V + W Q + V +N L LSL + ++R+ Q Sbjct: 470 -----LLHVHRYEPVIWHEVEQRIIWPVFDD--ANNALHLSLNWKKAQHQRIDRLKQATQ 522 Query: 527 QTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWA 561 Q + V V + L+P ++ + Sbjct: 523 QKWEIV-AVLVQPRRRGNDIDLQPYSLLVRESGIV 556 >UniRef50_C1QFN1 SWIM zinc finger-containing protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QFN1_9SPIR Length = 597 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 72/596 (12%), Positives = 192/596 (32%), Gaps = 85/596 (14%) Query: 11 LTPQALTALSNAGFVKRSLKELENG-----NVPEISHENDALIATFSDGVRTQ-LANGQA 64 + L L+N G RS+K+++N +I +N+ + T G + + + N + Sbjct: 12 INETFLLTLTNKGIYNRSVKDIDNIINNTPEKIKIEEDNNKIKVTIDTGEKIEVILNDED 71 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEK------------------------ 100 +K ++C+C + +C+H +M +L + L ++ + Sbjct: 72 IKSSKCTCPSKDICKHIIMSLLYIEHLDTENKADDDIENNNENNNENNNENNNKETKEKN 131 Query: 101 ----EEEWDPA--IWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSD-- 152 +D I +E+ L AL IE + +P + Sbjct: 132 NDITNNTFDEVKNISFDEIRKLSTKI-NFEYALDRFYENIEAEINENAMLEINIPEENTI 190 Query: 153 VRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDP 212 + F + SI+ A C C + +LC H ++A+ + E + ++ Sbjct: 191 IYFPKKDSIKKAVCSCKDSSLCAHKIIAILKYKETYGTLEDIKEEDKEI----------- 239 Query: 213 FASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRA 272 ++ ++ ++ ++ G + + N +++ R + Sbjct: 240 -----DENILKFAKEFAENIFEKGFYSCSEKDFDISEQLSVKLQVKNMPEIAKIFRSIAE 294 Query: 273 SVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEA 332 S+DA + + +N L+ L + ++ ++ + + V + + I + Sbjct: 295 SIDAMINKRASFNKLFAFASLSRLYNTIHVIEKAKKENDNKTVKML-TGEIRSKYINRTS 353 Query: 333 KLDHLRLVSLGMRCWQDIEHY-GLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFS 391 + LG W Y G + + + + S P + + Sbjct: 354 G----EFLGLGAYPWISSTGYLGASAYLYNINAKKVSFFSYVIPTFYDNAKISYDDIRSN 409 Query: 392 FQAGALAGGQIVSQAAKR--------SADGELLLATRNRLSSVVP-------LSPDAWQM 436 ++ I + + + E +++ + S ++ L Sbjct: 410 YRKKIHFENNISIEEISKHKFKFINYKVNNEERISSSKKTSVILNDRINCKLLEELRISK 469 Query: 437 LSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVIS 496 + L + ++ + I + ++ ++ + Q L +++ Sbjct: 470 NNEELFAESYNDILN--IDFKYDYFNKNDRAK-IIIAKFQKIENIEFNKTEQILYFDIVN 526 Query: 497 --GEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEP 550 + ++ LTL++ ++ ++ + D + + + + P Sbjct: 527 YTEKYDEERLTLNIKYTSIHSNGIKYIMNYKNSKIDKDKFIL----LEKTKYYIRP 578 Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 50/127 (39%), Gaps = 7/127 (5%) Query: 6 PELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQAL 65 E+ ++ + LS + +L EI+ I + ++ Sbjct: 140 DEVKNISFDEIRKLSTKINFEYALDRFYENIEAEINENAMLEINIPEENTIIYFPKKDSI 199 Query: 66 KEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQ 125 K+A CSC + +C H+++ +L Y+ T + ++E++ E + ++ A+ Sbjct: 200 KKAVCSCKDSSLCAHKIIAILKYKETYGTLEDIKEEDK----EIDENILKF---AKEFAE 252 Query: 126 ALVAKGI 132 + KG Sbjct: 253 NIFEKGF 259 >UniRef50_B1M3T8 Zinc finger SWIM domain protein n=2 Tax=Rhizobiales RepID=B1M3T8_METRJ Length = 658 Score = 373 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 169/606 (27%), Positives = 248/606 (40%), Gaps = 60/606 (9%) Query: 3 SLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA-LIATFSDGVRTQLAN 61 RP+L LT L L+NAG VKR+L+E+ G P ++ D + A F+DG T+L Sbjct: 1 MARPDLRALTDDGLIQLANAGLVKRALREVAAGAGPALAEAGDGTVEARFADGTVTRLGP 60 Query: 62 GQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEE------------------ 103 G+ A C+C A+GMCRHRV LV++Y+ A E Sbjct: 61 GRPPDAATCTCPASGMCRHRVALVVAYRAAVADGPVEGAAEGPTEETAERTAVPAAAAVA 120 Query: 104 WDPAIWLEE--LATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSI 161 WDP A L A + L+A GIT+ L G +P+ARLP + VRF ++ Sbjct: 121 WDPGTLDGATVEAGLGGAAAAELRRLLAGGITVGL--ERGAVPAARLPTATVRFLVPDAV 178 Query: 162 RFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNAC 221 +ARCDC G C HV LA++AF EA V + A+ + Sbjct: 179 GYARCDCAAGGGCAHVALAIRAFREA-------AGAPEIRLGGAVPARTATAATPAEDGL 231 Query: 222 RQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARA 281 + ++ L G+ ++AA R +AAE V + +L + A+ R Sbjct: 232 AEAADRVVAGLLEAGVVSGPEAHDAALVRLRRAAERRGATQVLLAEAELTDQLAAYAGRH 291 Query: 282 SHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVS 341 + Y+A L A L R+ +G G E + RLVS Sbjct: 292 AAYDAAVVLALAAELLGRVRGGA-----------------VALGLGQPYETAMGKTRLVS 334 Query: 342 LGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAAT----RRLFSFQAGAL 397 LG R R+ D DTG++L L R++ E E A Sbjct: 335 LGARFLARGRGAAARVALADTDTGALLALERAFAPGEAEADVVAGLPGRLLSPGLSVAGT 394 Query: 398 AGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRP 457 GQI++ A+R ADG L L R + + L DA L APL + ++ L RP Sbjct: 395 GQGQILTSVARRRADGLLALGQGARGRTAL-LPRDARVRLPAPLAARDVSSVLRRLADRP 453 Query: 458 PACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYA 517 PA +RP ++++ + V + W QT A V E L L+ +AP+A Sbjct: 454 PAFLRPRDRLEAFHVFAVEAVLGQAWAPGAQTWQAAVELPE-AGGTLHLARAYDPAAPHA 512 Query: 518 VERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASV 577 ++ +A PV V+G V +G L +P + + R D P + Sbjct: 513 LDALAGACSGRWGPVRQVAGPVRIEDGALVCDPWSV-SADRLVVPDLAA------PDGAG 565 Query: 578 LPVPST 583 P+P Sbjct: 566 HPIPPA 571 >UniRef50_D0SME1 Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SME1_ACIJU Length = 710 Score = 373 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 106/590 (17%), Positives = 194/590 (32%), Gaps = 61/590 (10%) Query: 9 LELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEA 68 L +L +N G V+R+LK++E G + + E I SDG + L + L A Sbjct: 8 LAYDQDSLVTYANTGLVRRALKDIEAGKII-LQTEQSEHITIESDGQQVGL-SSAGLVNA 65 Query: 69 QCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQALV 128 CSC A G C+H V VL Q+ + E E+ + ++ + Sbjct: 66 SCSCPATGACKHIVAAVLYLQQHLQNSVQQPIENLTT--DSAAEIQSTTVELVEQLENNF 123 Query: 129 AKGITIELFC--------------APGEIPSARL---PMSDVRFYSR-----------SS 160 + E+ I ARL F Sbjct: 124 QPNLIEEILRVDLNQIAKKIGKAQTQKAIKLARLWQKEQQTELFEEEYSLKIRIKSLAED 183 Query: 161 IRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNA 220 I + + G L ++ A ++ W + T + + EG Sbjct: 184 IIYVAGAGLAGMLSNLEKDQSAYYLAALSEVQRLQGKFWTKLELNETENPAVLSESEGQF 243 Query: 221 CRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHAR 280 + L+Q + G+S + +A + + ++ LRQL V R Sbjct: 244 IIELKDDLAQLIEF-GLSHVNEMTARQLHLLNMSARSESLPRLAAMLRQLSGQVARLLNR 302 Query: 281 ASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLV 340 H + E L LA +N+ L + GE + ++D L L+ Sbjct: 303 DEHSSEHETLLYLAQINAYLYQLEHAE-----GEALVRLRGKSRRQYEVDQEQID-LELL 356 Query: 341 SLGMRCWQD-IEHYGLRIWFTDPDTGSILHLSRSWPRSEQEN----SPAATRRLFSFQAG 395 LG R W+ G+ ++F++ + I ++ + + N + + + ++ A Sbjct: 357 PLGARWWRTLGGARGITLYFSEQENPQIFEVTLARTENNDPNFNRYNAWSQQSIWMMTAQ 416 Query: 396 ALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVAL-----R 450 L ++ Q + S D L + + S +PL+ L+ I Sbjct: 417 QLMQKKVRLQQPRFSEDDRL---SASGQSRALPLNS------LKDLQDFSIYQHIGFDNW 467 Query: 451 EYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPA 510 L+QR ++ + VD +L ++ + D Q L V + + L L Sbjct: 468 HKLQQRWQQQLQSIEGVDQTVMLNISSYDNPQVDEVEQCLWWTVYDQN--QSAIHLRLDW 525 Query: 511 SASAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAW 560 S + ++ L Q + V + L L P ++ Sbjct: 526 KTSEIEKIRQLEHLCNQK-TQINSVFVYCQIKGHTLVLSPISLLITQNEK 574 >UniRef50_C0ZD36 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZD36_BREBN Length = 552 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 86/573 (15%), Positives = 187/573 (32%), Gaps = 58/573 (10%) Query: 2 NSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLAN 61 + + + L +N G RS+KE+E G +D + SD +L Sbjct: 6 SEFHRFIALCNEEYLIKYANKGIYNRSIKEMEKGMSVSYEFGDDYVECALSDDSVCRLHA 65 Query: 62 GQALKEAQCSCGANGMCRHRVMLVLSYQRLC--ATTQSTEKEEEWDPAIWLEELATLPDA 119 ++ CSC ++ +C+H ++ ++ Y + A ++ E++E + P + L P Sbjct: 66 D--IERFSCSCPSDKICKHVIISIVYYAQNHLQAGAETEEEQETYKP-DFSWLLQLQPSH 122 Query: 120 TRKRA------QALVAKGITIELFCAPGEIPSARLPMSD--VRFYSRSSIRFARCDCIEG 171 K + L E+ + L D V F S S I + C C Sbjct: 123 ISKAFTPAQLEEVLFRLDYFEEMEVVETSFLTMTLHTQDISVSFDSESEIGKSMCTCKAK 182 Query: 172 TLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQT 231 C H + + + + + +D + ++ + L Sbjct: 183 GNCLHKLEVILRYRAMHQ--------LQDREQLQASVTDVSYETDVVTEAKA----LIAE 230 Query: 232 LWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLH 291 + G+++ AA N V + +R + ++ F R ++ L Sbjct: 231 ILGIGLAKLSQTICTRLELLAIAAHNGNLPRVEKDIRGIHGELNLFFQRHVKFSTEALLD 290 Query: 292 QLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIE 351 +L+ + L ++ ++ ++GS + + L L +LG W+ Sbjct: 291 RLSRVYLSLLALEKTDHTEAKK--------QLLGSFKSKYHMVPQLSLYALGANPWETRS 342 Query: 352 HY-GLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFS--------FQAGALAGGQI 402 Y G+ +F I + + P E + + + L+ Q+ Sbjct: 343 GYKGITYYFYSLSDQRIYTYTEARPV-YYEGISFSFKDSYKGKVPWGGLISMEELSHSQV 401 Query: 403 VSQAAKRSADGELLLATRNRLSSVVPLSPDAWQML-SAPLRQPGIVALREYLRQRPPACI 461 + AK + + L + + + + + D + L + + Sbjct: 402 ILTQAKTNREQRL---SSSEETQLTIVPRDNIEELDLGKVLVCDWSNGWKDAAGDMFE-- 456 Query: 462 RPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERM 521 +D++F+L + + +D Q L + + + L LS+ + + Sbjct: 457 ---TALDSVFLLKANKFTQVDFDQKTQQLILTIEDEQ--SHSLQLSISYQGEFARNIRHL 511 Query: 522 AALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMM 554 + + V V + L P +M Sbjct: 512 EQ--NKRLLELRDVYLLVQELGDGLY--PISIM 540 >UniRef50_B4ESP7 Putative uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=B4ESP7_PROMH Length = 691 Score = 364 bits (934), Expect = 6e-99, Method: Composition-based stats. Identities = 101/574 (17%), Positives = 178/574 (31%), Gaps = 53/574 (9%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEAQC 70 ALT +NAG ++R+ K+++N ++S + SDG + L +++A C Sbjct: 10 YDEDALTVFANAGLLRRARKDVDN---EKVSVTDANTGQFSSDGQKVVLHEA-GIQQASC 65 Query: 71 SCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEE--------------LATL 116 C A G C+H + +L Q A ST+ +P E L TL Sbjct: 66 DCSAAGCCKHILAAILWLQ---ANNNSTDDINTDNPIETSAEKIIAPVETPPLLPSLFTL 122 Query: 117 PDATRKRAQALVAKGITIELFCAPGE-IPSARLPMSDVRFYSRS---SIRFARCDCIEGT 172 + A I L + + ++ + F + +G Sbjct: 123 DPELLIKKAGKPACRTAINLIEQWEDKTLVLEDTGTQLKIQLPDVDEPVIFLQASGYDGM 182 Query: 173 LCEHVVLAVQAFVEAKAQQAEFN-HLIWQMRSEHVT--SSDDPFASEEGNACRQYVQQLS 229 L +AF A + W + + SS P EE A ++Q Sbjct: 183 LSPFSSSQKKAFHLAIVAKIFKQNTQPWTWPEDLIPLKSSQRPLNDEEI-ALINTIEQFI 241 Query: 230 QTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGEC 289 L G+S + + +A ++ LR L V R + Sbjct: 242 DDLLRQGLSHISLSSATQLHLLNMSARAEGLPRLASYLRTLSTQVKRLAERHFTMDESNV 301 Query: 290 LHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQD 349 L LA +++ L + + L L+ + W Sbjct: 302 LRLLAHISAYLFQLSYATPEQ-----LKTLRGQLRRQYDDKKTSL---ALIPIDAHWWTA 353 Query: 350 IEHY-GLRIWFTDPDTGSILHLSRSWPRSEQ----ENSPAATRRLFSFQAGALAGGQIVS 404 G F D +T L +++ P S + L+ A L + Sbjct: 354 QSGALGTTFTFWDKETKQFLQATQARPNQLDTLFNRYSVWHSLSLWKQTADKLMRRPFLL 413 Query: 405 QAAKRSADGELL-LATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRP 463 QA + S +G+L + + L + L L L Y +P + P Sbjct: 414 QAPRISDEGKLATIGDSFAQNQTDFLDVTDYHQLQTELGIHNWQDLPNYFTDQPEGFLSP 473 Query: 464 LNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAA 523 L +L + L W Q + +V+ G L L +E + Sbjct: 474 L-------VLHIKSYNPLIWHEVEQCVIWEVVDNNGNSAFLRLY--WEGETQNNLEEL-R 523 Query: 524 LLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKT 557 L + + + ++ + + L P + KT Sbjct: 524 FLTKRELEIVAITVQPVRRDFNIDLLPTTIWIKT 557 >UniRef50_C5D1M8 Zinc finger SWIM domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5D1M8_VARPS Length = 689 Score = 350 bits (897), Expect = 9e-95, Method: Composition-based stats. Identities = 107/611 (17%), Positives = 181/611 (29%), Gaps = 45/611 (7%) Query: 5 RPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQA 64 L L+N G ++R+ K++E G + + +DG R QL + Sbjct: 4 HDGYRAYDDDTLATLANPGLLRRAAKDVEAGK-IAWAEQGTEAGVVTADGQRVQLDA-RG 61 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLC------------ATTQSTEKEEEWDP---AIW 109 ++A+C C A G+C+H + L + L Q + DP + Sbjct: 62 PQQARCDCPAPGICKHILGAALWLRALEPAAPGSAGGAPSDEQQDRQAPPGADPLAEILA 121 Query: 110 LEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPM--SDVRFYSRSSIRFARCD 167 L+ A A + A ++ + G LP + R+ + + + Sbjct: 122 LDAAALFKAAGVAAVRRAAAAASSVVEWRVQGGALIMNLPELGASCRWVAGAGYAGMVSE 181 Query: 168 CIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQ 227 ++A+ A A Q W + D E A V+ Sbjct: 182 VPAAERKAVHLIAIAALRSAHGQ-----PFAWPESARPAPVEDTVRLGERERAFLLQVES 236 Query: 228 LSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAG 287 + + L GG+S A +A ++ LR L +VD R Sbjct: 237 MLEELLTGGLSHVSELTSARLLALNMSARGEGLPRLAALLRNLGGTVDLLVRRDHRAEER 296 Query: 288 ECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCW 347 + +A R++ R + R + L L+ LG W Sbjct: 297 DAFALMA----RIHALCAALARAEGELAVALRGRLQRDFDESA-----ALDLLPLGAHWW 347 Query: 348 QD-IEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQA 406 Q GL + F D +L S + P ++ + Q V +A Sbjct: 348 QTRGGARGLTVAFWDLAGARVLQASLARPDGSDTAFTRSSAWSANALWSGAGAAQSVCEA 407 Query: 407 AKRSADGEL----LLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIR 462 A R L LA + + A + L LR Sbjct: 408 ALRLEHPRLAEDGRLALGGATRAQPLPAWTADDPRLKSIGCGNWSELGVRLRAATGLSAE 467 Query: 463 PLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMA 522 P + +L ++ D ++Q LD V G L L +P V+ + Sbjct: 468 PFDA----VLLRPSDTRPPVLDEAQQRLDWLVQDDAGRW--LRLGIPVGPEHRQRVDNLD 521 Query: 523 ALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPS 582 L PV V + L P +++ AL + A + + Sbjct: 522 R-LAARRAPVHAVLVRIERSAASTELMPLAVLSSNAKKALQTVSLDFADEAARTTSLANR 580 Query: 583 TAHQLLIRCQA 593 L R Q Sbjct: 581 ILRMLEARQQQ 591 >UniRef50_A6LX16 Zinc finger, SWIM domain protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LX16_CLOB8 Length = 540 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 76/560 (13%), Positives = 183/560 (32%), Gaps = 66/560 (11%) Query: 43 ENDALIATFSDGVRTQLANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCAT-------- 94 E ++ DG + + ++ +CSC + +C+H VM L + Sbjct: 2 EEASIKCELPDGNSCSV--NEDIQAFKCSCPSRSICKHAVMSYLYIKNHIEEIFGESSSL 59 Query: 95 -------TQSTEKEEEWDPAIWLE----ELATLPDATRKRAQALVAKGITIELFCAPGEI 143 + +++ EE+ P + E L ++ A R + K + L E Sbjct: 60 NGDSSEEMEISKQHEEFSP-DYSELLNINLKSIKTALGDREFGNIVKRMEFGLRADIKED 118 Query: 144 PSARL---PMSDVRFY-----SRSSIR--------FARCDCIEGTLCEHVVLAVQAFVEA 187 ++ ++F + I A C C LC H AV + Sbjct: 119 ALLQVEFAGEETIKFISVNGEKKKDISIKDSSIVNNALCSCKSKALCRHKAEAVIHY--- 175 Query: 188 KAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAA 247 + + + ++ + D + E +C + V++ + ++ G+++ + Sbjct: 176 ----GLYKGTLKKEEVIYLIAKDKIVSKETLESCIKEVRKTLEEIYFTGLARIPESFLDK 231 Query: 248 FNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMA 307 + + + + ++ L+ + + + + ++ + L ++ + + Sbjct: 232 LEQVSIICHNSDIPSIEKKIKALQGKLRLYINKNASFSVESFRYLLQSIYILTMAMENYS 291 Query: 308 RRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHY-GLRIWFTDPDTGS 366 ++GE+ G + ++ + L ++G W Y G +FT Sbjct: 292 DEKTLGELM--------GEHKSSYYEIPPIELAAVGASKWITESGYEGTTFYFTVEGFNK 343 Query: 367 ILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSV 426 + S S + + S G + + S+A + +G++ SS Sbjct: 344 WFTYTISRNSSYNNKNSYSRE---SCPWGIASDIESFSKARVKLINGKIN-GDFRLSSSE 399 Query: 427 VPLSP--DAWQMLSAPLRQ---PGIVALREYLRQRPPACIRPLNQVDNLFILPVAECISL 481 + S L+ L + + NLF++ + Sbjct: 400 NSKGEIIGTTDIQSIYLKDKTFNSWKDLFSAVSNNSGLYFNEREENYNLFLIKPLKFGES 459 Query: 482 GWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVSF 541 +D +Q + + + +T+ + S + +E++ + + + P L++ V Sbjct: 460 SFDKIQQLFKMPLYDEK--EECVTIKVKYSINNKSLIEKLERMERMKNYPFMLLT-KVYL 516 Query: 542 VEGQLTLEPRVMMTKTRAWA 561 E LT P K Sbjct: 517 NETGLTAVPITAYYKNGTLV 536 >UniRef50_C6JNG6 Predicted protein n=2 Tax=Fusobacterium RepID=C6JNG6_FUSVA Length = 563 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 98/572 (17%), Positives = 218/572 (38%), Gaps = 64/572 (11%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGN-VPEISHENDALIATFSDGVRTQL 59 +N ++P L + + + ++SN G KRS+K+LE +S ++ +I + V +L Sbjct: 8 INEIKPFLPFINEEFIVSISNKGIYKRSIKDLEKARENILLSVKDTGIIEVKIEDVVVEL 67 Query: 60 ANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAI-------WLEE 112 +++++C+C A+ +C+H VM +L + + Q+ E++E + + EE Sbjct: 68 --NVNIQKSRCTCPASSICKHIVMALLYLKEFYDSNQNEEEKEIEEDKEEKIDEINFYEE 125 Query: 113 LATLP-----DATRKRAQALVAKGITI--ELFCAPGEIPSARLPMSD--VRFYSRSSIRF 163 L L + K+ V I I E G++ + + + V F SI Sbjct: 126 LKKLTGDKILEIVGKKTYNSVINSIFIRNEAIFEYGDMLTVTIASQNAKVYFPKEKSIEN 185 Query: 164 ARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQ 223 A C C E +C H + A+ +++ + + E + + E+ + Sbjct: 186 AMCSCKEKGICSHKIYALISYLIKEGKITEEDTEYETIEIG-----------EKEKEIIE 234 Query: 224 YVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASH 283 + +++ GIS + + + ++ L+ L + + + ++ Sbjct: 235 NLHIFISSIFDRGISGLTGNEISQAEKFYIQIYGIKLFASADELKNLSSELGFYFSKNIS 294 Query: 284 YNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLG 343 ++ +H L ++ +R + + +D+ ++ V R + LD++ L+ LG Sbjct: 295 FSNKRLMHILCSIYNRTSAL--LIVKDNRKKIMLVGQRQ------EEKFNLDNIELIGLG 346 Query: 344 MRCWQDIE-HYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQI 402 + +F D SIL +S P + +S +T GQ+ Sbjct: 347 ASGGITKRNDLLITAYFYCKDINSILSMSTLRP--YENSSQISTL---------YNMGQV 395 Query: 403 VSQ--AAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVAL--------REY 452 S + K + +++L + + + + + I L Sbjct: 396 WSNELSFKEVSVSKMILKDAKLSTGKISSAKSTICNIKGKTTEEDINELAVSDYSLIITE 455 Query: 453 LRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASA 512 LR+ P + N+F++ E ++ +D Q L V+ G N + + ++ Sbjct: 456 LRKHKFRYFEPYSATKNIFLIKAEEIKNIEYDKIEQKLKFDVLDSNG--NTIVFDIKYNS 513 Query: 513 SAPYAVERMAALLQQTDDPVCLVSGFVSFVEG 544 + A++ +T + G ++ G Sbjct: 514 VSENAIKYFEK--NKTGSYFEYILGSITEKNG 543 Score = 42.2 bits (97), Expect = 0.067, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 39/96 (40%) Query: 91 LCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPM 150 + + + + + P I E + ++ + + + + + + + + Sbjct: 1 MDSKNSVINEIKPFLPFINEEFIVSISNKGIYKRSIKDLEKARENILLSVKDTGIIEVKI 60 Query: 151 SDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVE 186 DV +I+ +RC C ++C+H+V+A+ E Sbjct: 61 EDVVVELNVNIQKSRCTCPASSICKHIVMALLYLKE 96 >UniRef50_D1S2D8 Zinc finger SWIM domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S2D8_9ACTO Length = 709 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 119/529 (22%), Positives = 189/529 (35%), Gaps = 29/529 (5%) Query: 92 CATTQSTEKEEEWDPAIWLEE--LATLPDATRKRAQALVAKGITIELFCAPGEIPS--AR 147 + + W P +E A + A+ + +G + P Sbjct: 150 REGAAAGSEPWRWSPGDVTDEELAAAIGAPALTAARRRLRRGYAAVVHRPDTADPVPRVE 209 Query: 148 LPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVT 207 LP VRF I +AR D + + LAV A A + + ++ T Sbjct: 210 LPTGTVRFLVPRQIGYARGDAADDGGEA-IALAVWACRAADREHPDRQEAQVRV-GGTAT 267 Query: 208 SSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESL 267 ++ P + L G + +A + + RW ++ Sbjct: 268 VTERPALDAAVALAADVL--------LTGAAHLGSGVDARLAATRRDLDAAGLRWPLLAV 319 Query: 268 RQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSG 327 L ++A+ AR + Y LA L +R R ++ P V+G+ Sbjct: 320 EDLAGQLEAYAARGARYRPETFADLLAELPAR---------RRAVVNAGATPVERVLGTH 370 Query: 328 IAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAA-- 385 E L +RL LG R G+ + P S+L L R++P ++ Sbjct: 371 EPAETPLRRVRLTGLGARVRCSGGEVGVDVVLAHPAAVSVLVLRRAYPVTDDGPPTGHEL 430 Query: 386 -TRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQP 444 RR+ GALA G +VS++A RSA L +A + V W L L Sbjct: 431 AGRRVTGTTLGALATGNVVSESAVRSAAHRLRIAAGRLARTTVTPGAGEWSGLPPGLLAR 490 Query: 445 GIVALREYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVL 504 AL L RPP +RP +++ +L + E ++G+ + Q L A V +G + Sbjct: 491 DPDALAAELAGRPPRLLRPRTAAESVRVLALGEVRAIGYAAGEQRLHATVTGADGGTATV 550 Query: 505 TLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDA 564 T + A+AP A++ +AA L T P VSG V L +EP ++ A Sbjct: 551 TAT--HHAAAPGALDALAAALDGTQGPPRYVSGTVRRGADGLVVEPLAVVADAVVVPDLA 608 Query: 565 ETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLHNGWRYQEQSAIGQ 613 L +V P L ALL Q H G R+ + Sbjct: 609 PGVGDGRLT-GAVDARPDPVAVALGTASALLAQAAHTGLRHLPVGFPDR 656 >UniRef50_A1SR73 SNF2-related protein n=2 Tax=Psychromonas RepID=A1SR73_PSYIN Length = 1080 Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 49/161 (30%), Gaps = 13/161 (8%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA------LIATFSDGVRTQL-- 59 + ++TPQ ++ + R + + V ++ D + + +T Sbjct: 1 MPKITPQDISTSFGRNIIDRGTRYFKESRVLSCEYDEDKKQLHGSVKGSSETPYQTSASI 60 Query: 60 -ANGQA--LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATL 116 + + + + C+C C+H V L+L+YQ + W + + Sbjct: 61 KPSNKGGFIIHSTCTCPVGWNCKHAVALLLAYQADTPNYNIENSYQTWFELLQSQLSKKK 120 Query: 117 PDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYS 157 Q + + ++ VRF Sbjct: 121 SITAPSAYQGHFRLSFNKSAYNH--SLLYLQVEYGSVRFLK 159 >UniRef50_C5CI01 Zinc finger SWIM domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI01_KOSOT Length = 558 Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 13/163 (7%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF----SDGVRTQLANGQ 63 L E+T + + L ++ +R G V +I D L A + Q+ Sbjct: 5 LNEMTIEDIRELVSSQVFERGESYFRQGMVLDIRESGDTLRARVKGSGDEVYSVQIKESN 64 Query: 64 ALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKR 123 A C+C +G+C+H + +L ++ S E + L ++ K Sbjct: 65 GRILATCTCPYDGVCKHVIATLLYAKQQEIKPSSHGAFSE----KLESYINNLDISSLKE 120 Query: 124 AQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARC 166 K E I + ++ S+R Sbjct: 121 MLMDFLKRYPEEAEALEMMILAKNDEAE-----AKKSLRNLLS 158 >UniRef50_A7BS04 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BS04_9GAMM Length = 664 Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 6/102 (5%) Query: 9 LELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRT-----QLANGQ 63 LT LT + V R + +V +++ D + + +G + + Sbjct: 18 KALTWNELTNWAGTTIVSRGKTYQQGKHVSQLAKTPDGKLVAWVEGTQVYATQVGIDANG 77 Query: 64 ALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWD 105 +L + CSC C+H V +VL Y +++ D Sbjct: 78 SLD-STCSCPYWDTCKHAVAVVLEYLEHVKKSKNVPTTSNDD 118 >UniRef50_A4BU68 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BU68_9GAMM Length = 296 Score = 71.5 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 70/260 (26%), Gaps = 29/260 (11%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDG-----VRTQLANG 62 L +L L + A V R ++ +V ++SH D + + G ++ Sbjct: 12 LRKLDFDDLHDWAGAKIVNRGKNYVK--HVDQLSHTEDNTLVAWVTGNDRYATSVRIGAD 69 Query: 63 QALKEAQCSCG-ANGMCRHRVMLVLSY------QRLCATTQSTEKEEEWDPAIWLEELAT 115 E C+C + G C+H V ++L+ +R+ + + E Sbjct: 70 GDFDEF-CTCPYSWGPCKHAVAVILAAAEHLKVKRMIPSLDEGSDLGQTLRGDIEENEWL 128 Query: 116 LPDATRKRAQALVAKGITIELFCAPG------EIPSARLPMSDVRFYSRSSIRFARCDCI 169 + + + L RF Sbjct: 129 NGEREENNESGRTPSRTEAQTKLEETLESKSYDELLHLLIELSTRFPKVKQYIVE----S 184 Query: 170 EGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSS----DDPFASEEGNACRQYV 225 E HV V+A + R E +D + V Sbjct: 185 EQLASGHVDKLVRALRSEIRDRTAEAAWYNHWRGEGSLPDYSHVEDRLRALAEQGYVNAV 244 Query: 226 QQLSQTLWLGGISQPLIHYE 245 QL + LW+ G Q + Sbjct: 245 LQLGEELWIKGNQQIEQSDD 264 >UniRef50_Q5V1X9 Putative uncharacterized protein n=1 Tax=Haloarcula marismortui RepID=Q5V1X9_HALMA Length = 178 Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 12/130 (9%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFS----DGVR 56 M P+ LT A+ L+ R + G V EI+ + + A + Sbjct: 1 MRMASPD-PTLTEAAVRDLARPQSYDRGENYYDKGAVVEIARRGETIRAAVEGSQYKPYQ 59 Query: 57 TQLANGQ-ALKEAQCSCGAN--GMCRHRVMLVLSYQRLCAT----TQSTEKEEEWDPAIW 109 ++ + + + CSC + G+C+HRV ++L+Y R +E + DP Sbjct: 60 VRIELDETGVVDTACSCPYDHGGICKHRVAVLLTYVRDSDEIDQRPPVSELVADADPEEL 119 Query: 110 LEELATLPDA 119 + L L ++ Sbjct: 120 RDVLVDLVES 129 >UniRef50_C5VE60 Swim zinc finger domain protein n=2 Tax=Corynebacterium matruchotii RepID=C5VE60_9CORY Length = 533 Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 91/340 (26%), Gaps = 39/340 (11%) Query: 106 PAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFAR 165 P + + LA +P KRA+ L A + ++ + + V + Sbjct: 11 PGVSADALAVIPSRLLKRAEKLAAGSDSWQVTLVDDGFR-VEVGTTTVTYVE----DKFE 65 Query: 166 CDCIEGTLCEHV----VLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSD---------DP 212 C C+ C H+ + A A + + + + T +D Sbjct: 66 CSCLISPKCAHIGAVCMAAPIAAEAEDSTEPSAGGVDKPAADKTTTDTDSAAQAAWAKKL 125 Query: 213 FASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRA 272 A + C Q ++ + G++ + ++ + ++ L Sbjct: 126 PAVADIAGCVSQAQDITSAICDQGLANLSARFHMQLLALVRTTRVVGLPRLERAITALAT 185 Query: 273 -----SVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSG 327 V AR + +A L R + RD+IG + Sbjct: 186 LSQDARVGKPVARGEVARQLFAVAMVAHLLDR-----DPRDRDAIGAARRAYKPLELSGA 240 Query: 328 IAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWP-RSEQENSPAAT 386 + L + G + ++++ P + + Sbjct: 241 QNA-------TFIPLYAEPIVTTSGFAGMSITLCTRGGDMFSITKTPPGDASAVPTIWYG 293 Query: 387 RRLFS---FQAGALAGGQIVSQAAKRSADGELLLATRNRL 423 LA ++ K SADG + R Sbjct: 294 PVRLGDMHCSHAHLARHMLLMSGGKGSADGRIGSGKGVRA 333 >UniRef50_UPI00019731C2 DNA/RNA helicase, superfamily II, SNF2 family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019731C2 Length = 827 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 41/118 (34%), Gaps = 18/118 (15%) Query: 11 LTPQALTALSNAGF-VKRSLKELENGNVPEISHEN---DALIATFSD---------GVRT 57 LT + + ++ G + K ENG+V I D V Sbjct: 2 LTERDIREQTDKGITYIKGFKLYENGSVLYIDTAGGEKDGSCCVSGTVEGSYGNEYDVSI 61 Query: 58 QLANGQALKEAQCSCGA----NGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLE 111 L + ++ C+C A GMC+H V L L Y Q E E+ P + E Sbjct: 62 ALDENEEIEGYSCTCPAFETYPGMCKHCVALALEYLYSGEDAQGEEVFED-SPLEFRE 118 >UniRef50_Q3ARD4 Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii CaD3 RepID=Q3ARD4_CHLCH Length = 570 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 6/96 (6%) Query: 11 LTPQALTALSNAGFVKRSLKELENG---NVPEISHENDALIATFSDGVRTQLANGQALK- 66 + + +KR L +NG EI + ++ +L + + Sbjct: 3 IPLNQFENYIDETILKRGLSYFKNGYVHEPEEIKQGEFEALVEGTEDYTVRLTIEKGIIT 62 Query: 67 EAQCSCGAN--GMCRHRVMLVLSYQRLCATTQSTEK 100 + C+C + +C+H L+ Q+ + Sbjct: 63 DYSCTCPYDYGPICKHITALIFYLQQEELGLEVQPP 98 >UniRef50_C9LWZ0 Helicase, Snf2 family n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWZ0_9FIRM Length = 1098 Score = 59.2 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 11/112 (9%) Query: 3 SLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEN------DALIATFSDGVR 56 + E++ L A+ LSN ++ + ++G V ++ + + VR Sbjct: 1 MRKGEIVLLKDSAIHELSNDMSYRKGCRYFKDGRVAKLLRRPGTSIYVATVEGSEDYEVR 60 Query: 57 TQLA-NGQALKEAQCSCGA----NGMCRHRVMLVLSYQRLCATTQSTEKEEE 103 +L G+ ++ C+C A NG C+H V L+ Q + Sbjct: 61 VRLDKAGEKIEAYDCTCPAAALYNGACKHVVALLKVIQAGQFEEEGEGTAAP 112 >UniRef50_Q8TTH1 Predicted protein n=4 Tax=Methanosarcina RepID=Q8TTH1_METAC Length = 653 Score = 58.4 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 3/109 (2%) Query: 6 PELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVR---TQLANG 62 EL L + + + E G V E+ + +G + T++ Sbjct: 9 DLFKELRWSDLQDWAGGKATAKGIAYQEEGRVKELKRTPTGSLVARVEGTKEYFTEIFLE 68 Query: 63 QALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLE 111 + C+C C+H V VL Y L + E DP + Sbjct: 69 NGKLSSICTCPVGHDCKHGVAAVLEYLELAEQGEEAPLASEEDPFVIRA 117 Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 77/246 (31%), Gaps = 9/246 (3%) Query: 95 TQSTEKEEEWDPAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVR 154 + + + W + + A +G EL P AR+ + Sbjct: 2 PSENKCADLFKELRWSDLQDWAGGKATAKGIAYQEEGRVKELKRTPTGSLVARVEGTKEY 61 Query: 155 F---YSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAE----FNHLIWQMRSEHV- 206 F + + + C C G C+H V AV ++E Q E + +R+ Sbjct: 62 FTEIFLENGKLSSICTCPVGHDCKHGVAAVLEYLELAEQGEEAPLASEEDPFVIRARKGY 121 Query: 207 TSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSES 266 T ++ A R+Y++QL++ + + +A R L+ + V E Sbjct: 122 TEAETESEEPSAGALREYLEQLTKRELIEILVAFAEK-DALLGRYLRDRQNLAAEDVGEI 180 Query: 267 LRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGS 326 + ++ + +D + L + + + E+ + + Sbjct: 181 IGEVYSELDELLEETGYSAYENYEIDLPDFLNVQIGLESLLDSGYSDELLDIGKELMDRY 240 Query: 327 GIAGEA 332 E Sbjct: 241 EKIAEY 246 >UniRef50_C2ALD5 DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2ALD5_TSUPA Length = 1081 Score = 58.0 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 9/106 (8%) Query: 9 LELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA------LIATFSDGVRTQLANG 62 TP+ LT A V+R+ + + G + ++ +++ + T R + Sbjct: 10 PSFTPEDLTGFFGAPTVRRAGEYVGTGLIGDLEWDDEKRLVTGVVAGTREYDARVWIEPS 69 Query: 63 QA---LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWD 105 + C+C C+H L+L + E+ + W+ Sbjct: 70 GGGWRPVRSLCTCPVALNCKHGAALLLELTAEDVEESAVEQPDPWE 115 >UniRef50_C9KQS0 Helicase, Snf2 family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQS0_9FIRM Length = 1078 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 11/95 (11%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDA----LIATFSDGVRTQLA---NGQ 63 + + + A++ KR ++ G V ++ + D + ++ ++ G Sbjct: 2 IDEEQIRAVATDAAYKRGVRYFRRGAVAQLERQADGRSYAAVVAGTEAYHVRIGLTEAGD 61 Query: 64 ALKEAQCSCGAN----GMCRHRVMLVLSYQRLCAT 94 ++ C C A G C+H V ++ + Q+ A Sbjct: 62 EVESFHCDCPAAAQYLGACKHVVAVLKAVQQQVAD 96 >UniRef50_C7PDC7 Zinc finger SWIM domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDC7_CHIPD Length = 580 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 8/100 (8%) Query: 24 FVKRSLKELENGNVPEISHENDALIATFSDG-----VRTQLANGQALKEAQCSCGANG-M 77 V R + EN V ++ + L G V +L+ ++ C C +G M Sbjct: 15 IVFRGREYYENEAVVDLEETEEGLWYAEVMGNDTYEVEVKLSGKNKIESYSCDCPYDGDM 74 Query: 78 CRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLP 117 C+H V ++ + + T +K + + L + Sbjct: 75 CKHVVAVLFTLKEELLNTIVKKK--TDTETDFKKLLQKIS 112 >UniRef50_C6WL98 Putative uncharacterized protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WL98_ACTMD Length = 588 Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 100/368 (27%), Gaps = 28/368 (7%) Query: 111 EELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSI----RFARC 166 + L LP RKR A + K ++ + + + + R + C Sbjct: 13 DVLDALPPRLRKRVDAALDKAAAWQVVVDGDGARAELDADTALTWVLRGGVLASADDLTC 72 Query: 167 DCIEGTLCEHVVLAVQAFVE-----AKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNAC 221 C+ C H +AV A A A + +E S P E+ + Sbjct: 73 TCLLAPKCLHRGVAVAAAEVAEVPGAGAPGTGVPAEVAAPVAEVAEESGPPPIREDERSA 132 Query: 222 RQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARA 281 + + T+ G S A RA+ A S + ++ + + A + Sbjct: 133 AAVLWEACATVLRSGASGSGAVVRAGLLRAVHVARVAGLHRASSAGLRIASMLADARAGS 192 Query: 282 SHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVS 341 S ++ +L L R + P T + LRL Sbjct: 193 SSFDRELLTAELVEL-----LLLCHDLRAGVPADPAELRGTARREYR----PIGALRLYG 243 Query: 342 LGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLF----SFQAGAL 397 L Y + D G + + P + AA + L Sbjct: 244 LCTEPVVTSSGYAGVVTHLVDDRGGLWTVPAIMPGGRERVVAAAGGPVAIGESGLTQAGL 303 Query: 398 AGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDA------WQMLSAPLRQPGIVALRE 451 G ++ S D L R + + D W+ A A Sbjct: 304 GRGGLLLSGGTASPDRRLGAGKAVRAVAASGATWDEEPLAGLWRQPLAEQVDRAFRAAAR 363 Query: 452 YLRQRPPA 459 RPP Sbjct: 364 PEAHRPPG 371 >UniRef50_D1KAQ9 Putative uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KAQ9_9GAMM Length = 577 Score = 56.5 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 6 PELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVR---TQLANG 62 L L+ + LS +G KR + ++G + + I+ G + L + Sbjct: 2 DNLKLLSESLIEKLSGSGAYKRGVDYYQHGLIKSLHINPKGKISAEVIGSKIYHVHLHHT 61 Query: 63 QALKEAQCSCGANGM---CRHRVMLVL-SYQRLCATTQSTEKEE 102 L E C+C A+ C+H V + L Y ++ A T ++ + Sbjct: 62 STLFEGHCNCPASDNFDFCKHCVAVALSYYHQIHAGTITSGDDN 105 >UniRef50_Q0W8Z9 Putative uncharacterized protein n=2 Tax=Euryarchaeota RepID=Q0W8Z9_UNCMA Length = 335 Score = 56.1 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Query: 7 ELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIA----TFSDGVRTQLANG 62 +L +LT Q ++ L + ++R ++ E G + +++A T + T + Sbjct: 11 DLRKLTEQDISKLFSPKILERGIEYFEEGRLQRPFVYRSSIMAECHGTQPENYHTSIDVR 70 Query: 63 QALKEAQCSCGAN-GMCRHRVMLVLSY 88 A C+C G C+H + VL Sbjct: 71 DDNIVASCTCPYAFGYCKH-IAAVLYA 96 >UniRef50_A6L2M3 Putative uncharacterized protein n=6 Tax=Bacteroides RepID=A6L2M3_BACV8 Length = 594 Score = 56.1 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 8/115 (6%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISH---ENDALIATFSDGVRTQLA-NGQALK 66 +T R + E V E+ +D +++ +G ++ Sbjct: 4 ITLDNFEDFVPYKIWMRGEEYYETDAVSELEEISPGEWTATVEGTDDYNVEISMDGNEIE 63 Query: 67 EAQCSCGANG-MCRHRVMLVLSYQRLCATTQS---TEKEEEWDPAIWLEELATLP 117 C C +G +C+H V +L+ + + ++ + + + A LEE+ + Sbjct: 64 SWYCDCPYDGEICKHVVATLLAIRDNRKKAGNSIFSKMKIKAEEAPVLEEIKEVG 118 >UniRef50_A4J9J5 SNF2 helicase associated domain protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J9J5_DESRM Length = 1084 Score = 55.7 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 37/117 (31%), Gaps = 8/117 (6%) Query: 8 LLELTPQALTALSNA-GFVKRSLKELENGNVPEISHENDA----LIATFSDGVRTQLANG 62 ++ L+ + + + +R + G V E+ + D S+ + + Sbjct: 1 MILLSTKYIQKWCGSPSIYQRGVSYFRQGRVLELIQDFDEDSYYAQVVGSEEYQVVIRLT 60 Query: 63 QALKEAQCSCGAN---GMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATL 116 +A C C A C+H + ++L ++L +P Sbjct: 61 DHDIDATCDCPAYETYWTCKHIIAVLLEIEQLQREDMGKAPRNIAEPEKNKGASRKY 117 >UniRef50_B9ZCU9 Zinc finger SWIM domain protein n=2 Tax=Halobacteriaceae RepID=B9ZCU9_NATMA Length = 848 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 92/313 (29%), Gaps = 35/313 (11%) Query: 7 ELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF--SDGVRTQLANGQA 64 EL + T A+ A +R + E G + + E + AT S RT + A Sbjct: 187 ELRKPTRDAIRERCTAQSFQRGVSYFEEGRLRALRLEGRTVTATVQGSREYRTTVDLSAA 246 Query: 65 LKEAQCSCGAN--GMCRHRVMLVLSYQRLCAT--TQSTEKEEEWDPAIWLEELATLPDAT 120 ++ CSC + G C+H V ++L+ + + + + P A Sbjct: 247 DFDSWCSCPYDYAGDCKHIVAVLLAVRDRYDELLDTAHPDLSSDESSSTSSSGGLEPSAA 306 Query: 121 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 ++ + L ++ +A RF + + +HV Sbjct: 307 DDDLESALETTDAGTLREFLRDVLAAN-NSLRERFLAT----------AGHPVEKHVAD- 354 Query: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQP 240 + R V E Y + + L Sbjct: 355 -------YKRDLNRQFETATGRHGIVEYDTRLEFDEYEELAATYRESGAHERALDIYRAL 407 Query: 241 LIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHA--RASHYNAGECLHQLAALNS 298 R ++ RQL A++DA+ A R + ++ + L Sbjct: 408 SEAIHKNLERIDDSSGHYG--------RQLEATIDAYAACVREAGFDREMACEHIEYLYE 459 Query: 299 RLNCAQEMARRDS 311 + A+ R++ Sbjct: 460 QFLRAEFRFVRNA 472 >UniRef50_UPI0001850A23 hypothetical protein Bcoam_19954 n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850A23 Length = 546 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 36/347 (10%), Positives = 96/347 (27%), Gaps = 43/347 (12%) Query: 21 NAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALK-EAQCSCGANGMCR 79 N V + L+ + +V + + A D V ++ ++CSC +G CR Sbjct: 28 NDKLVSQGLRLFQQRSVYGVKASRTEIQAQVQDVVPVKVKLDLDFPMLSRCSCPRDGWCR 87 Query: 80 HRVMLVLSYQRLCATTQS--------TEKEEEWDPAIWLEELATLPDATRKRAQALVAKG 131 HR+ + + E+ + L L + ++ + + + Sbjct: 88 HRMAVYFYMYEKLGNVNEWYGMWRNGGKLPEDDSAGSKPD-LTKLHPSLKRASDLMKTRT 146 Query: 132 ITIELFCAPGEIPSARLPMS-DVRFYSRSS--IRFARCDCIEGTLCEHVVLAVQAFVEAK 188 I + R D+ ++ S + L + + + Sbjct: 147 DQNRTPEGWYSILATRFEEELDLDELAKRSYMLDMMVNRAYRSLLKDAPLEREWKALYQL 206 Query: 189 AQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQ-YVQQLSQTLWLGGISQPLIHYE-- 245 + ++ + + + Q + ++S++L G++ ++ Sbjct: 207 YTALFLYEHLGGWLVDY------DMSEQSIESILQFLLDEMSESLLSLGVTAIPFAFDPF 260 Query: 246 --------------AAFNRALQAAETCNWRWV--SESLRQLRASVDAFHARASHYNAGEC 289 + W + ++LR+ D R Sbjct: 261 LDFIREKLIDMISSEQIGQLAIELYQYLWINLFKKKALRE--KEYDRLMDRLKAQEPMYA 318 Query: 290 LHQLAALNSRLNCAQEMARR---DSIGEVPPVPWRTVVGSGIAGEAK 333 ++A ++ L + + + +P T + + Sbjct: 319 GERVAIIHQLLLLGENEKAQMLLEKEASWVLLPSETWIRYFFQYQQP 365 >UniRef50_A5URZ6 Zinc finger, SWIM domain protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5URZ6_ROSS1 Length = 611 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 57/221 (25%), Gaps = 16/221 (7%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDG------VRTQLAN 61 L +L Q + + A R L G V ++ L A V + Sbjct: 17 LPDLDKQQIRERAGAQSWTRGLAYFAQGAVRQVVWREGVLTAQVVGSHHELYRVTVRFDA 76 Query: 62 GQALKEAQCSCGAN--GMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDA 119 A+ A+C+C + G C+H V +L + LA L Sbjct: 77 QGAIINAECTCPYDWGGDCKHIVATLLYLLNRPEQVEQRP--------DLTSLLAPLDAE 128 Query: 120 TRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVL 179 R + + + + P + + + Sbjct: 129 QLTRLVVQLVAVHPDLIDDVEELLATLATPSTSATVSLPVDLAVLQRRIRADMRRLLRDY 188 Query: 180 AVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNA 220 + E E ++ + +++ D A A Sbjct: 189 DTGDYYEDVIDLGEALMPAIEVVGDLLSADDARGALAVLEA 229 >UniRef50_C0VUH2 Putative uncharacterized protein n=1 Tax=Corynebacterium glucuronolyticum ATCC 51867 RepID=C0VUH2_9CORY Length = 575 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 71/230 (30%), Gaps = 18/230 (7%) Query: 11 LTPQALTALSNAGFVKRSL--KELENGNVPEISHENDALIATFSDGVRTQLANGQALKEA 68 L+ L +S+ G +R+L ++ + + E D + T + R L + Sbjct: 29 LSYDYLAWVSDDGSFERALDIHDITIVSQSDRVVEAD-VQGTADEPYRVTLTAYGDIVLP 87 Query: 69 QCSCGANGM-CRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQAL 127 C+C C+H + + L+ W E A R+ + Sbjct: 88 TCTCPVEWNWCKHAIAVGLALSPEDGNAGEGP----WGLDCAAVEERFFDQAPRETLVQV 143 Query: 128 VAKGITIELFCAPGEIPS-ARLPMSDVRFYSRSSIRFARCDCIEG--TLCEHVVLAVQAF 184 + +E P + + A L + + ++ H V+ ++ Sbjct: 144 LR-DYPVENHADPHPLLTPAVLTVGT-----PQEVAALMRMAMKSLAETARHRVVTIKKS 197 Query: 185 VEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWL 234 + I + + + + G +++L ++L L Sbjct: 198 KSTYGYTDDLM-DIRDDFEGTIETLNSLEEAGRGRYLLPVIEKLIESLLL 246 >UniRef50_Q3IPD9 Putative uncharacterized protein n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IPD9_NATPD Length = 670 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 32/246 (13%), Positives = 68/246 (27%), Gaps = 17/246 (6%) Query: 12 TPQALTALSNAGFVKRSLKELENGNVPEISHENDAL--IATFSDGVRTQLANGQALKEAQ 69 T + + +R +K E + ++ E + I S + Sbjct: 5 TRSKIRSFCTEQSFERGVKYYEQDRIQKLEVEGGDITAIVRGSRDYDISIDIEDDTIRTV 64 Query: 70 CSCGAN--GMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQAL 127 CSC + G C+H V ++L+ + + + + + E L D T Sbjct: 65 CSCPYDYAGDCKHIVAVLLAVEDRSPESTAETADSSDNSETVDVEA--LIDRTPDDELRT 122 Query: 128 VAKGITI--ELFCAPGEIPSARLPMSDVRFYSRS-SIRFARCDCIEGTLCEHVVLAVQAF 184 I + P V Y + F G + + + Sbjct: 123 FLLDIIADDRDIRDRFVAFAGEEPGKTVYDYKQEIDRLFEDAAGRGGMIEYDTRIDFSQY 182 Query: 185 V---EAKAQQAEFNHLIWQMRSEHVTSSDDPFASEE-----GNACRQYVQQLSQTLWLGG 236 E + R+ T ++ ++ G + ++ ++T+ G Sbjct: 183 HDLVEMHRSRGNIGTATDLYRALAETIRENMNRIDDSSGHYGRELSRAIEGYAETITEQG 242 Query: 237 ISQPLI 242 P Sbjct: 243 YGHPEK 248 >UniRef50_B3CDM3 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CDM3_9BACE Length = 529 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 5/84 (5%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDA----LIATFSDGVRTQLANGQALK 66 +T + R E+ V EI E+ + + T G + Sbjct: 2 ITISNFEKYVLPQILMRGEDYYESDAVLEIEEESPGEWIATVCGTENYEVTVSMEGNEII 61 Query: 67 EAQCSCGANG-MCRHRVMLVLSYQ 89 +C C +G +C+H V +L+ + Sbjct: 62 AWECDCPYDGNICKHVVATLLAIR 85 >UniRef50_D2AUU1 Putative uncharacterized protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AUU1_STRRD Length = 686 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 54/205 (26%), Gaps = 15/205 (7%) Query: 233 WLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQ 292 G+ +A RA A + ++ + A R + + + Sbjct: 202 LSAGVPAAGAVPQAELLRAAHTARLAGLPRAEAAALRVVRGLRAARERHDGHRLADLVAA 261 Query: 293 LAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEH 352 L L P +V S G LR+ + Sbjct: 262 LRELLLTAGRLAAADP-------DPALVGSVRRSYQPG----GSLRVYGVFREPVISGTG 310 Query: 353 YGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRL----FSFQAGALAGGQIVSQAAK 408 YG + + G ++ P AAT + LA ++ A Sbjct: 311 YGGVVTHLVTEDGRWFSVADVKPGGPARARGAATAPVAIGPAMLNHAQLARAGLLIAGAT 370 Query: 409 RSADGELLLATRNRLSSVVPLSPDA 433 S DG L R + + +S A Sbjct: 371 VSPDGRLGAGGGVRATPINGMSWTA 395 >UniRef50_C6MLY8 Zinc finger SWIM domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MLY8_9DELT Length = 660 Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 9/105 (8%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDG-----VRTQLANG 62 L LT + L + R L+N + +S +D +A + G L Sbjct: 8 LKSLTTEDLRQWAGTKIFNRGKSYLKNVDG--LSRTDDGALAAWVYGSDEYATSVGLDPD 65 Query: 63 QALKEAQCSCGA-NGMCRHRVMLVLSYQRLCATTQSTEKEEEWDP 106 L E C+C +G C+H V ++L+ + E D Sbjct: 66 GEL-EYVCTCPYEDGPCKHAVAVLLAAAEQVKRKEEIPLLEPDDE 109 >UniRef50_B8FNC9 Zinc finger SWIM domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FNC9_DESAA Length = 642 Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 9/105 (8%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVR-----TQLANG 62 L LT L + V R +V +++ + + G R +L + Sbjct: 10 LRTLTWGELEEWAGDKIVSRGRSY--KKHVSDVAVTPEDEFIAWVQGTRKYATWIELDSK 67 Query: 63 QALKEAQCSCGA-NGMCRHRVMLVLSYQRLCATTQSTEKEEEWDP 106 L C+C G C+H + LVL L K + D Sbjct: 68 GGLDCG-CTCPYERGPCKHAMALVLVCMDLIEEKAKIPKAAKDDE 111 >UniRef50_A8S608 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S608_9FIRM Length = 1098 Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 35/111 (31%), Gaps = 16/111 (14%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI-------ATFSDGVRTQ--LAN 61 + Q + L +R+ K + + D + + D TQ L Sbjct: 1 MDAQEIRTLLGKSIFERAQKYRKRILQSSCTTNEDGVRHLTALVQGSGPDCYYTQVWLRE 60 Query: 62 GQALKEAQCSCGAN-----GMCRHRVMLVLSYQRLCATTQSTEKEEEWDPA 107 + A C C N C+H L+L Q + EK+ E P Sbjct: 61 NGSFVSASCDCPYNQNGDGTYCKHIGALLL--QDAEKNPPAPEKKPESIPG 109 >UniRef50_Q9K8U0 BH2912 protein n=1 Tax=Bacillus halodurans RepID=Q9K8U0_BACHD Length = 515 Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 59/544 (10%), Positives = 140/544 (25%), Gaps = 91/544 (16%) Query: 9 LELTPQALTALSNAG----FVKRSLKELENGNVPEISHENDALIATFSDGV----RTQLA 60 L+ + + L N +R + E G V S +++ I DG T + Sbjct: 6 PSLSIEYVQHLLNKKFQSYIAERGKRYHEEGKVINFSVQSNNRIEAQVDGTHLYHVTVVL 65 Query: 61 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT 120 + L + C+C C+H + +Q WD I + TL Sbjct: 66 DDFGL--SNCTCPYEDYCKHMAAALYEWQHRQVLANI------WDKNIPQPVIDTLHP-V 116 Query: 121 RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 + + + + + +++++ D + +++ A Sbjct: 117 LFSTYRQLISRAYLTVAQVEELMEAM-----------KTAVKQHFSDAEAAVIYIYIIQA 165 Query: 181 VQ----AFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLS------- 229 + ++ + Q+ F+ ++ + + + + + Sbjct: 166 MYGMATSYQTYERQERRFSSFFQGLQEVIIQALPALSDGDLLRLAKAMFRSFLSNENTEY 225 Query: 230 ---QTLWLGGISQPLIHYEAAFNRALQAA-------ETCNWRWVSESLRQLRASVDAFHA 279 ++L + + L A + L + + Sbjct: 226 GPWESLMREFLPLVPSRLYQRLSDLLDATYEKQPLGKKGRLVKSYFLLAEGHGLLALQQL 285 Query: 280 RASHYNAGECLHQLA-----ALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKL 334 + L + + + M + + Sbjct: 286 EGHTIREPDVLPHMTWMKTNHAWTTMKAWFHMLFPRKESAFLYLQPFYDEMEVETASDES 345 Query: 335 DHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQA 394 W W P +L L+++W + +R Q Sbjct: 346 LQSS------NVWAR--------WLQQPSYQRLLSLTKNWSKE---------KRSALIQE 382 Query: 395 GALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLR 454 A + Q R A +LL + L + +P + L + ++ Sbjct: 383 LLPALKNQLEQMPSRIAYIKLLTLEKRAEEGANYLLQYETEPFR---LRPEVNELLQMIQ 439 Query: 455 QRPPACIRPLNQVDNLFILPVAECIS-------LGWDSSRQTLDAQVISGEGEDNVLTLS 507 + + P V + F+L + E S + + L + E + Sbjct: 440 RENRELLFP---VYHQFVLRLIEKKSRPHYEEAVHFLKILHCLYKETEDKERFHQYIR-R 495 Query: 508 LPAS 511 L + Sbjct: 496 LKYT 499 >UniRef50_D2LXU9 SNF2-related protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LXU9_BACS4 Length = 1093 Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 10/94 (10%) Query: 7 ELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA------LIATFSDGVRTQLA 60 +L +L+ ++ L N KR GNV +++ + + + V ++ Sbjct: 2 DLFQLSKSSIRELCNPLVFKRGSTYFSEGNVEDLTWNEEKKFFSATVNGMETYDVHVHVS 61 Query: 61 NGQALKEAQCSCGA----NGMCRHRVMLVLSYQR 90 + K+ CSC A G+C+H V ++ + Sbjct: 62 GERYAKKFYCSCPAYEKYTGICKHIVSVLFEIKE 95 >UniRef50_Q0W923 Putative uncharacterized protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W923_UNCMA Length = 643 Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 5/89 (5%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHEN----DALIATFSDGVRTQLANGQ 63 + + T L + R L ++GNV + N + + + +T + + Sbjct: 1 MPDFTDDDLIDIFGDRTYGRGLDYYQSGNVTDPLKINGVLYAEVWGSADEPYQTSVTIDE 60 Query: 64 ALKEAQ-CSCGANGMCRHRVMLVLSYQRL 91 CSC MC+H V ++L++ Sbjct: 61 GGNIFSDCSCPFGDMCKHGVAVMLAWMHE 89 >UniRef50_C2GK04 Putative uncharacterized protein n=1 Tax=Corynebacterium glucuronolyticum ATCC 51866 RepID=C2GK04_9CORY Length = 580 Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 28/275 (10%), Positives = 76/275 (27%), Gaps = 17/275 (6%) Query: 11 LTPQALTALSNAGFVKRSL--KELENGNVPEISHENDALIATFSDGVRTQLANGQALKEA 68 L+ L +S+ G +R+L ++ + + E D + T + R L + Sbjct: 29 LSYDYLAWVSDDGSFERALDIHDITIVSQSDRVVEAD-VQGTADEPYRVTLTAYGDIVLP 87 Query: 69 QCSCGANGM-CRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPD-ATRKRAQA 126 C+C C+H + + L+ + E D A E + Sbjct: 88 TCTCPVEWNWCKHAIAVGLAL--SPEDGNAGEGPWGLDCAAVEERFFDQAPREMLVQVLR 145 Query: 127 LVAKGITIELFCAPG-EIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFV 185 + + + P V R +++ + + + Sbjct: 146 NYPEESAGNPHPLITPAVLTVGTPQE-VAALMRMAMKNLAETARHRVVTIKKSKSTYGYT 204 Query: 186 EAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYE 245 + + + + + + + + L G P++ Sbjct: 205 DDLMDIRDDFEGTIETLNSLEEAGRGRYLLPVIEKLIESLLSLCSPKMHIGGVVPVLSKA 264 Query: 246 AAFNRALQAAETCNW------RWVSESLRQLRASV 274 A + + + + W++ ++ + + Sbjct: 265 LALHL--RHCQGVDAGSTHLVTWLARTIPSILEHL 297 >UniRef50_A9B6V0 Non-specific serine/threonine protein kinase n=2 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6V0_HERA2 Length = 1055 Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 20/150 (13%) Query: 3 SLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEND----ALIATFSDGVRTQ 58 L +LL ++ AL A + V+ G V + ++D A+ + + Sbjct: 1 MLAADLLNIS--ALRAEAGQRVVQAGEAYYRAGQVEMLDLDHDQALFAVHGSQENPYTVT 58 Query: 59 LANGQALKEAQCSCGANG---MCRHRVMLVLS-YQRLCATTQSTEKEEEWDPAIWLEELA 114 + + Q + C+C +C+H V L Y +L A P+IW A Sbjct: 59 IISDQHWLISDCTCPYAAKGVICKHVVAAALYLYDQLVAHP----------PSIWRSIFA 108 Query: 115 TLPDATRKRAQALVAKGITIELFCAPGEIP 144 + TR+R +++ IE + +P Sbjct: 109 NIQPPTRRRQNSMLLIFSLIERGASWTLVP 138 >UniRef50_B1VT15 Putative uncharacterized protein n=8 Tax=Streptomyces RepID=B1VT15_STRGG Length = 618 Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 75/274 (27%), Gaps = 17/274 (6%) Query: 213 FASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRA 272 AS A + + G+ +++ RA +A + + + + Sbjct: 148 VASPAQRAAADALWSAGAAVLEAGVDGAGAVTQSSLLRAAHSARLRHLPRAAAAALSVVT 207 Query: 273 SVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEA 332 + A A Y + + LA L S + + + V G + Sbjct: 208 LLRAARAGDPSYRTADLVTALAELLSTAHRVGTASGAELAA---------VRGRARRPYS 258 Query: 333 KLDHLRLVSLGMRCWQDIEHY-GLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRL-- 389 LRL L + G+R W PD G + + P A R + Sbjct: 259 PDGSLRLYGLFTEPVITDSGHGGVRTWVAAPD-GRLFTVGDVAPGGVGRALGTADRAVRL 317 Query: 390 --FSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIV 447 + L + A S DG L + + + + A L + Sbjct: 318 GESALTHRELGRAGLAVSGATASPDGRLGAGKGVKAVTARGAAWT--EPPLAALWETPPS 375 Query: 448 ALREYLRQRPPACIRPLNQVDNLFILPVAECISL 481 + P +L L V ++ Sbjct: 376 EQAARALRSTARYADPDGGGSDLIFLDVEILGAV 409 >UniRef50_A1ANL7 Zinc finger, SWIM domain protein n=4 Tax=Deltaproteobacteria RepID=A1ANL7_PELPD Length = 432 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 89/306 (29%), Gaps = 60/306 (19%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDG-----V 55 M S++ L LT + L + R + V ++S D +A + G Sbjct: 1 MKSVKTMLKGLTHEELREWAGDRIFDRGRNYI--SRVSQLSRTEDGTLAAWVSGSDEYAT 58 Query: 56 RTQLANGQALKEAQCSCGA-NGMCRHRVMLVLSYQRLCATTQS----------------- 97 + + C+C +G C+H V ++L+ + Sbjct: 59 TVRRDGREDFD-YDCTCPYDDGPCKHAVAVLLAAAGQLNGGGAIPLLDPCADLALEMFGD 117 Query: 98 TEKEEEWDPAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSA----RLPMSDV 153 E +EEW A + ++ P+ + R + + I E A P Sbjct: 118 PEDDEEWADAEEPDVESSSPEEAKGRLPRI--ESILAEKSREELVSLLAGLASDFPDVAR 175 Query: 154 RF-----YSRSSIRFARCDCIEGTLCEHVVLAVQAFV-EAKAQQAEFNHLIWQMRSEHVT 207 R + C + V +++ +++H+ Q+R+ Sbjct: 176 RINETAQLETGQVGKIVCALK-KEIRSLTAEDVWYNPWKSEGNLPDYSHVEQQLRAL--- 231 Query: 208 SSDDPFASEEGNACRQYVQQLSQTLWLGGISQPL---------IHYEAAFNRALQAAETC 258 V +L + LW G Q + A L+A + Sbjct: 232 ---------SDRGHADAVLELGEELWQRGNKQVECSHDEGDTAMKIAACLEIVLRALPSS 282 Query: 259 NWRWVS 264 + V Sbjct: 283 SMPRVE 288 >UniRef50_Q2S3X5 SWIM zinc finger domain protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3X5_SALRD Length = 153 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 9/145 (6%) Query: 9 LELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDG------VRTQLANG 62 L +T L + G +R + +G V + +D + G V T Sbjct: 4 LPVTRDQLREHTAGGSFERGRQYFHDGAVQSVERTDDHTLKAKVQGSNVHPYVVTVQFEA 63 Query: 63 QALKEAQCSCGA--NGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWL-EELATLPDA 119 + +C+C C+H V VL +S A ++L+TL + Sbjct: 64 DHIAAVECTCPYYEGSWCKHVVATVLKVLDSDEVLKSDPAAVADLLADMDRDQLSTLIER 123 Query: 120 TRKRAQALVAKGITIELFCAPGEIP 144 + A L+ + P Sbjct: 124 LVEHAPRLLDQIERERARLIGESDP 148 >UniRef50_C8NWP7 Putative uncharacterized protein (Fragment) n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NWP7_9CORY Length = 473 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 80/282 (28%), Gaps = 23/282 (8%) Query: 159 SSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFN-------HLIWQMRSEHVTSSDD 211 + A CDC+ C H+ + A A A + ++ + + Sbjct: 58 NPPASAECDCLLSPRCLHLAQVLMACPPAAASPDDTADPAELSEPADVDGAADPASVDEP 117 Query: 212 PFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLR 271 +++ A ++ + L G+ ++ + A ++ + +L Sbjct: 118 LSLTDDQLATLSLAEECLRGLLDRGLGGLTAMDSSSVLWTVSAGRVQRLPLLAGAFARLH 177 Query: 272 ASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGE 331 + + R + L + + G VG+ Sbjct: 178 GELSSADGR----VTEAAISLLVDATLATHQLRH-------GHETKTLSIDAVGTARRTY 226 Query: 332 AKLDHLRLVSLGMRCWQDIEHY-GLRIWFTDPDTGSILHLSRSWP---RSEQENS-PAAT 386 + L+L Y G+ + D G + L P + +A Sbjct: 227 QPVGGLKLRGWACEPVLTKSGYAGVITYLVDERDGYVWQLPSVVPGDETQVDQAYRASAG 286 Query: 387 RRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVP 428 LA G ++ A SADG L + R S+ P Sbjct: 287 FAELGLSHHDLARGGLLLTHATASADGRLGRGAKVRASARTP 328 >UniRef50_Q7ULC6 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7ULC6_RHOBA Length = 660 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 8/104 (7%) Query: 10 ELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGV-----RTQLANGQ- 63 LT L + + + ++R + G V ++ D I G R L + Sbjct: 10 TLTWSTLESWTGSRTIQRGEDYQKQGRVRKLVLCGDGSIIATVQGTESYITRVSLNTKKR 69 Query: 64 -ALKEAQ-CSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWD 105 ++ + CSC C+H V VL C + + D Sbjct: 70 SGVQLSSYCSCPVGYDCKHGVATVLKMIADCEAGKRPPSISDTD 113 >UniRef50_C7P3C8 Zinc finger SWIM domain protein n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7P3C8_HALMD Length = 656 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 91/244 (37%), Gaps = 20/244 (8%) Query: 2 NSLRPELLELTP--QALTALSNAGFVKRSLKELENGNVPEISHENDALIATF--SDGVRT 57 + L P+ +LTP A+ ++ A +R ++ +E+G V +++ AT S RT Sbjct: 8 SELDPDSRDLTPTRDAIRSICTAQSFQRGVEYVEDGRVRDLTVTGTEAEATVRGSHDYRT 67 Query: 58 QLANGQALKEAQCSCGAN--GMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELAT 115 + + QCSC + G C+H V ++L+ A E ++ + E+ T Sbjct: 68 AVDLSVEGFDPQCSCPYDHAGECKHVVAVLLTVIEQSAELFDEHAEHDF--GVPDHEMLT 125 Query: 116 LPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRF-----ARCDCIE 170 A R+ +E + + R + DV + S R A E Sbjct: 126 SGVAVDDRS-----TRHAVERAVDEADPETMRAFLRDV--LAEDSDRREQFLVAVGTPAE 178 Query: 171 GTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQ 230 ++ ++ + F +A ++ + ++ +D + + L++ Sbjct: 179 KSVADYRREIDRKFEQATDRRGIVAYDTQLDFRQYYDRADTYREHGDHERALTIYRALAE 238 Query: 231 TLWL 234 + Sbjct: 239 GIQQ 242 >UniRef50_UPI00017889D0 zinc finger SWIM domain protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017889D0 Length = 549 Score = 51.5 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 18/102 (17%) Query: 9 LELTPQAL---------TALSNAGFVKRSLKELENGNVPEISHEND-ALIATFSDGVRT- 57 LT L + +KR + + G V + +I DG T Sbjct: 4 PNLTLDDLQWQTLIRQTAGYFSDLTIKRGFQYYKQGRVHASEKADASGVIEASVDGTETY 63 Query: 58 ----QLANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATT 95 QL + L +++CSC NG C+H V ++L Y +L + Sbjct: 64 RIRLQLHS---LSDSECSCPVNGGCKHMVAVLLDYAQLQGRS 102 >UniRef50_C5RYN7 Putative uncharacterized protein n=1 Tax=Actinobacillus minor NM305 RepID=C5RYN7_9PAST Length = 505 Score = 51.5 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 7/101 (6%) Query: 17 TALSNAGFVKRSLKELENGNVPEISHENDA-----LIATFSDGVRTQLANGQALKEAQCS 71 +R L + G V ++ + + +I T+ L+ + +C+ Sbjct: 8 AQFFGTKIAERGLVYFQQGKVRQLENHKEKRWYAEIIGTYPYYASLTLSKNFGIASYECN 67 Query: 72 CGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEE 112 C G C+H L + L A E + +E Sbjct: 68 CPYGGRCKHL--AALYFAALQALNYQVEPSYPLEIKESEDE 106 >UniRef50_C0QG17 Helicase, Snf2 family n=2 Tax=Deltaproteobacteria RepID=C0QG17_DESAH Length = 888 Score = 51.5 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 66/270 (24%), Gaps = 31/270 (11%) Query: 24 FVKRSLKELENGNVPEISHENDALIATFSDG----VRTQLANGQALKEAQCSCGANGM-C 78 +R +G+ +D DG TQ+A C+C G C Sbjct: 19 IFQRGESIYHHGSYFLSRENSDGSFVYEVDGSYGNYTTQVAIKGEEVLTSCNCPYPGDGC 78 Query: 79 RHRVMLVLSYQRLCATTQSTE--KEEEWDPAIWLEELATLPDATRKRAQALVAKGITIEL 136 +H V +L+ + L + + + DP + +E+ A RK+ +A I+ Sbjct: 79 KHVVAALLNARELLLKREKDKVTTPNDDDPYLSEDEIRQQALADRKK-RAATEPFTVIQG 137 Query: 137 FCAPGEIPSAR----------------LPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA 180 G+ + + C + Sbjct: 138 DMFKGDHLVVNKNNREYCVTLHNPEQGIGHCTC----PDYLTNGLGTCKHIQFLVSHLEK 193 Query: 181 VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQT---LWLGGI 237 F +++ ++ + + + G I Sbjct: 194 EPGFARQLSKERFPFADVYWNSQCNAPQLFSERLDHGDGGLKSLFEPFFDENGQFKPGEI 253 Query: 238 SQPLIHYEAAFNRALQAAETCNWRWVSESL 267 S+ + + V L Sbjct: 254 SEIMTLVKRVDGDKRVRIRETLLNRVDRYL 283 >UniRef50_D1AP62 SNF2-related protein n=2 Tax=Bacteria RepID=D1AP62_SEBTE Length = 1125 Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 13/108 (12%), Positives = 32/108 (29%), Gaps = 15/108 (13%) Query: 11 LTPQALTALS-NAGFVKRSLKELENGNVPEISHEND-----ALIATFSD---GVRTQLAN 61 L + + N R + + + ++ +D V L Sbjct: 2 LNYSDIKKFASNKAVFSRGEDYFSSNRIISLKSTDNFGLNWEGRVIGNDSVYDVTVGLDK 61 Query: 62 GQALKEAQCSCGAN------GMCRHRVMLVLSYQRLCATTQSTEKEEE 103 + + +C C G C+H + +++ + L ++E Sbjct: 62 NSNIIDYRCHCNCTAFKQFSGACKHIIAVLIKLRDLQEKNSILPEQEN 109 >UniRef50_Q1NL49 SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box helicase-like n=3 Tax=Proteobacteria RepID=Q1NL49_9DELT Length = 1022 Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 82/325 (25%), Gaps = 48/325 (14%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDG------ 54 +++ P+ L ++ +++ L + V E ++ ++L D Sbjct: 5 ISANHPDPYFFDRDDLARIAGEATIQQGLGYYKENRVTEADYDQESLWGKVEDPDAEIPY 64 Query: 55 VRTQLANGQALKEAQCSCGAN---GMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLE 111 + QC CG + +CRH V ++L+Y + + Sbjct: 65 AVAVRPGDRQELLFQCDCGTSRQEAVCRHVVAVLLAYADQKDENEQ---------LVSAA 115 Query: 112 ELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYS-------------- 157 E A R R + F + R+ Sbjct: 116 EAAVNDRIKRGRTEVTAEPAGGEPWFGVWQAASLQSTTHFNKRYRVTIRSLKRRANYCNC 175 Query: 158 RSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEE 217 C H + + K + A F ++ E+ Sbjct: 176 PDFANNQLGTCKHIEAVLHKIRKHPEYERFKEEPAPFPYVYLAWDVENAPRLRLHRPRRL 235 Query: 218 GNACRQYVQQLSQTLWLGGIS-QPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDA 276 + GG S + + A + A+ + A Sbjct: 236 RPELVNLLDDYFAA--DGGFSGRLPDDFFRFMEIADEEADIH-----------IGEDAIA 282 Query: 277 FHARASHYNAGECLHQLAALNSRLN 301 + R + A + A + +RL Sbjct: 283 YANRLAADAAHQLRA--ARIGTRLK 305 >UniRef50_D1BCC3 DNA/RNA helicase, superfamily II, SNF2 family n=2 Tax=Micrococcineae RepID=D1BCC3_SANKS Length = 1227 Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 48/166 (28%), Gaps = 14/166 (8%) Query: 12 TPQALTALSNAGFVKRSLKELENGNVPEISHENDA------LIATFSDGVRTQL-----A 60 + ++ L + R + + G V ++ D + + T + Sbjct: 3 SEADVSQLVGSETFARGEEYVGAGQVVSVARNGDGTTIVGQVRGSSRKQYVTVVEMSSAG 62 Query: 61 NGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDAT 120 + + +CSC C+H +L+Y + A E A Sbjct: 63 EQASPRYGRCSCPVRLNCKHTAATLLAYLDRVESQAVQAAAALEQSAAPSVEAGAPRAAA 122 Query: 121 RKRAQALVA-KGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFAR 165 R + + EL P + P+ P R +R + Sbjct: 123 RTTPRRSTEWERTFAELLTVPEDAPAV--PGRPGRRPKPWDVRSSH 166 >UniRef50_Q1VT30 Putative uncharacterized protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VT30_9FLAO Length = 560 Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 6/94 (6%) Query: 10 ELTPQALTALSNAGFVKRSLKELENGNV---PEISHENDALIATFSDGVRTQLA-NGQAL 65 ++ L + +KR L + G + EIS+ + ++ QL + Sbjct: 2 KIPLNEFEQLIDEKILKRGLSYFKGGAITDFSEISNGEYEATVSSTEEYTVQLEIRNNTI 61 Query: 66 KEAQCSCGAN--GMCRHRVMLVLSYQRLCATTQS 97 C C + +C+H V ++ Q+ Sbjct: 62 VVHNCDCPYDIGPICKHVVAVIFHLQQDKLELNE 95 >UniRef50_C6M591 Putative SWIM zinc finger n=7 Tax=Neisseriaceae RepID=C6M591_NEISI Length = 501 Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 7/79 (8%) Query: 15 ALTALSNAGFVKRSLKELENGNVPEISHENDA---LIATFSDGVRT--QLANGQALKEAQ 69 L L V+R L + G V +I + S+ +L + +K+ Sbjct: 5 YLPRLFPPHIVERGLLYFQQGKVRDIQKTSAGRYRAEVFGSENYSVWLKLDSDLYIKDGG 64 Query: 70 CSCGANGMCRHRVMLVLSY 88 C C G C+H M L Y Sbjct: 65 CDCPYGGACKH--MAALWY 81 >UniRef50_B0MG02 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MG02_9FIRM Length = 1117 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 58/196 (29%), Gaps = 41/196 (20%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDA--------LIATFSDGVRTQLANG 62 L + AL++ KR + V E S E D + + + L Sbjct: 15 LDQSEIRALADQNAYKRGRNLYRSDAVQEYSVEEDGGIDYIYAAVQGSGRNMYDVDLEYN 74 Query: 63 QA---LKEAQCSCGA----NGMCRHRVMLVLSYQRLCATTQST----------------- 98 L+ A C+C A G+C+H V ++ Y T ++ Sbjct: 75 MEEGWLENAHCTCPAFREYEGLCKHCVAVLFEYTDYLETQEAAWQYEQKKEESLAKLQTM 134 Query: 99 -------EKEEEWDPAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMS 151 EEW P A L K + + I ++ P + + Sbjct: 135 KGMQNKLSASEEWRPKTTPAIKAFLSQQQLKSTLPIAQESIYGKVHLEP--LLTCMDNFI 192 Query: 152 DVRFYSRSSIRFARCD 167 V F +S + D Sbjct: 193 QVEFKIGTSYLYVLKD 208 >UniRef50_C6VXP5 Non-specific serine/threonine protein kinase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXP5_DYAFD Length = 1261 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 43/136 (31%), Gaps = 13/136 (9%) Query: 70 CSCGAN-GMCRHRVMLVLSY--QRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQA 126 CSC G+C+HRV +L + E L E+ L + Sbjct: 76 CSCPDKAGLCKHRVAAILYILDKMPTIKQVVHEMASTTIELHELREMQ-LRSMVLEETWQ 134 Query: 127 LVAKGITIELFCAPGEIPSARLP------MSDVRFYSRSSIRFARCDCIEGT---LCEHV 177 A +E+ A + M+ R + C C + LCEH Sbjct: 135 NRANVGPVEIVSAREGEAECEVTDKGQTFMTTFRRVKGTRQIQTSCTCNQKLWVPLCEHK 194 Query: 178 VLAVQAFVEAKAQQAE 193 + A+ E ++A Sbjct: 195 LAALLKLREELGEKAF 210 >UniRef50_C5S5E5 Zinc finger SWIM domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5E5_CHRVI Length = 582 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 82/306 (26%), Gaps = 44/306 (14%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF--SDGVRTQLANGQALKEA 68 +T L L+ + R V + D + A ++ + +L + Sbjct: 6 ITVDNLMDLAGSKVFWRGESYFSGNAVGRVRVMGDRIKARVQGTEVYQVELWDDGGQLGY 65 Query: 69 QCSCG--ANG-MCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQ 125 C+C A+G C+H V + L++ A + E+ ++ P K Q Sbjct: 66 DCTCPHAADGYFCKHCVAVGLAWIGGAADRPDVDDEDGT-------AVSRTPTDPWKLIQ 118 Query: 126 ALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFV 185 + L P E +RL +R R + ++ + F Sbjct: 119 SY--------LETQPQETLVSRLME-----IARRDDRLYQSLLLKAERGRSGSDQAKRFR 165 Query: 186 EAKAQQAEFNHLIWQMRSEHVTS--------------SDDPFASEEGNACRQYVQQLSQT 231 A + WQ E + + ++ Q Sbjct: 166 RAIDEATRGAEDDWQSAEEFAEDLGAVIDALEELLEPQSATLLIDLTEHAIERAEKAMQH 225 Query: 232 LWLGGISQPLIHYEA--AFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGEC 289 + + E ++ + ++E L +L D ++ Sbjct: 226 IEDDEEGAGVEVVERLGELHQKACRLAPPDPVELAERLFRLEGRQDLQF---VSFSPDTY 282 Query: 290 LHQLAA 295 L Sbjct: 283 SEALGE 288 >UniRef50_A9B3T7 Zinc finger SWIM domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3T7_HERA2 Length = 142 Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 46/142 (32%), Gaps = 12/142 (8%) Query: 7 ELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEND---ALIATFSD---GVRTQLA 60 + ++ + A++ +R L+ E+G V + + A++ D V Sbjct: 2 DFPVISDAQIQAMAGERSFERGLEYFESGMVESVLQRGNMIQAVVCGSEDYLYDVAVHTK 61 Query: 61 NGQALKEAQCSCGAN--GMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPD 118 N + + QC+C + +C+H V ++L C + + + Sbjct: 62 NAEQI-STQCTCPYDYGPICKHSVAVLLFLL-YCPEQVVQRPPIRATLDELDD--SQIRS 117 Query: 119 ATRKRAQALVAKGITIELFCAP 140 A+ +E Sbjct: 118 LLLDVAEQHPEITTLVEQHIER 139 >UniRef50_C6N1M4 DNA helicase n=2 Tax=Legionella RepID=C6N1M4_9GAMM Length = 1091 Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 24 FVKRSLKELENGNVPEISHENDALIATFSDGVRTQLAN------GQALKEAQCSCGANGM 77 + R + ENG+V I + L G +Q+ + +K A C+C ++ Sbjct: 17 ILLRGQEYFENGHVLNIRFSDGLLKGRVK-GSSSQIYDVHMDLKAWPVKRASCTCMSSIN 75 Query: 78 CRHRVMLVLSYQ-RLCATTQSTEKEEEWDPAI-WLEELATLPDATRKRAQALVAKGITIE 135 C+H + + + R A + S + WL+ L + K A IE Sbjct: 76 CKHAAACLFALRDREKANSLSQPANKLDKRLDSWLKNLRAQEASVVKAHDATHHLVYLIE 135 Query: 136 LFC 138 L Sbjct: 136 LKL 138 >UniRef50_D0TG63 Zinc finger SWIM domain-containing protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TG63_9BACE Length = 570 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 6/74 (8%) Query: 24 FVKRSLKELENGNVPEISHENDALIATFSDGVRTQLAN----GQALKEAQCSCGANG--M 77 +KR + G V E+ +G + G + E C C + + Sbjct: 16 ILKRGFDYFKKGYVTEVEDLGGGDYEATVEGSEIYAVHLHIKGDKVMEYDCDCPYDWGVV 75 Query: 78 CRHRVMLVLSYQRL 91 C+H V ++ Q+ Sbjct: 76 CKHVVAVLFYLQKD 89 >UniRef50_B1R262 Swim zinc finger domain protein n=2 Tax=Clostridium butyricum RepID=B1R262_CLOBU Length = 555 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 9/86 (10%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDG-----VRTQLANGQAL 65 + N+ ++R + N + E ++E D DG V +L + + Sbjct: 1 MNINNFEKKINSTILERGYEYYINNKIAECTYEEDNTYTLKIDGNEEYQVVIKLDDKGDI 60 Query: 66 KEAQCSCGANG--MCRHRVMLVLSYQ 89 ++C+C + +C+H V Y+ Sbjct: 61 IYSECNCPYDYGVVCKHEVAA--YYK 84 >UniRef50_C6CWR2 Zinc finger SWIM domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWR2_PAESJ Length = 528 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 38/103 (36%), Gaps = 4/103 (3%) Query: 1 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALI---ATFSDGVRT 57 M SL +L +L N ++R +G V + ++ + SD Sbjct: 1 MASLDDKLHTALEHSLGQHLNEEIIRRGWDYYRSGQVLNVKQADEDTLYGAVQGSDVYSV 60 Query: 58 QLANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEK 100 L + + ++C+C N C+H + +Y + ++ Sbjct: 61 LLDSDH-FRYSKCTCPFNDYCKHMAAVYFAYCHSLDGETAAKE 102 >UniRef50_C7H341 N-domain protein, SNF2 family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H341_9FIRM Length = 1119 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 13/118 (11%), Positives = 30/118 (25%), Gaps = 14/118 (11%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDG---------VRTQLAN 61 + + + L R+ + + + +D + L Sbjct: 1 MDMEEIRYLLGGTVFARAKAYTDRIQDLNCEVAGNGVRHLSADVRGGGRSLYQTQVWLRE 60 Query: 62 GQALKEAQCSCGANG-----MCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELA 114 + A CSC N C+H L++ + ++ P + Sbjct: 61 NGSFVSASCSCPYNENGEGPCCKHIGALLMWDSESQGLSGRAPQKPSESPESIPGVVR 118 >UniRef50_A7GQG5 Zinc finger SWIM domain protein n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GQG5_BACCN Length = 129 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 6/85 (7%) Query: 14 QALTALSNAGFVKRSLKELENGNVPEISHENDAL----IATFSDGVRTQLANGQALKEAQ 69 + + R + E G V ++ ND + + D + + + Sbjct: 7 NEMKKWIPKHIINRGCEYYEEGYVEDVEVHNDKVFALVRGNYGD-YEVVIHL-EDFISSS 64 Query: 70 CSCGANGMCRHRVMLVLSYQRLCAT 94 C C C+H +V Q + Sbjct: 65 CECPYENYCKHMAAVVYEIQSIGEE 89 >UniRef50_A6TKV3 Non-specific serine/threonine protein kinase n=4 Tax=Firmicutes RepID=A6TKV3_ALKMQ Length = 1141 Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 38/107 (35%), Gaps = 11/107 (10%) Query: 1 MNSLRPELLELTPQALTALSN-AGFVKRSLKELENGNVPEISHENDA------LIATFSD 53 + +R +L + + L + + ++ + V ++ D + + Sbjct: 56 VREMRESMLRINRELLEDIVSHPNAYYNGVEYHKKNRVVDLKFRRDKKHFIAKVKGSNHY 115 Query: 54 GVRTQLANGQALKEAQCSCGA----NGMCRHRVMLVLSYQRLCATTQ 96 + + EA C+C A G C+H V ++LS + + Sbjct: 116 DIEVNFNQQGEMGEATCTCPAYDRFWGYCKHIVAVLLSIKEIDERGG 162 >UniRef50_Q2S6W0 Superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S6W0_HAHCH Length = 1106 Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 8/96 (8%) Query: 25 VKRSLKELENGNVPEISHEND----ALIATFSDGVRTQLANGQA----LKEAQCSCGANG 76 +R +K + V + + D + + + + E +CSC Sbjct: 17 FERGVKYFKQKRVTVVEYGEDHASATVRGSGDSAYQVLVTLENGAYGLRIEGECSCPIGY 76 Query: 77 MCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEE 112 C+H +L+ + + P+ +E Sbjct: 77 NCKHVAATLLAVNERSPVAAQKDTRSDHIPSHHPDE 112 >UniRef50_C8WUV0 Zinc finger SWIM domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUV0_ALIAD Length = 603 Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 74/282 (26%), Gaps = 46/282 (16%) Query: 24 FVKRSLKELENGNVPEISHENDAL--IATFSDGVRTQLANGQALKEAQCSCGANGMCRHR 81 R ++ E G V S ++ + + + R L + +++++CSC G C+H Sbjct: 28 VFDRGVEYAETGRVVSWSLQDGVIHAVVHGAADYRVFLHV-EDVEKSRCSCPYGGPCKHM 86 Query: 82 VMLVL-SYQRLCATTQSTEKEEEWD----------------------------------- 105 V + L + + + D Sbjct: 87 VAVALRVARETRLDGIRGGQPLDLDACLGSIGDGELPGYVADVMASRPDVSLLVRASRFV 146 Query: 106 ---PAIWLEELATLPDATRKRAQALVAKGITIE---LFCAPGEIPSARLPMSDVRFYSRS 159 P W +E + RA L A I + P + + + S Sbjct: 147 HTAPTRWADEASLSRLHQEARALLLAADRIAQGDAAIPFDSDAPPPVTVTYTGAGWESAR 206 Query: 160 SIRFARCDCIEGTLCEHVV-LAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEG 218 + D + G + AV F A+ + ++ + S + Sbjct: 207 RLIQTFADALAGATPAALAPYAVYDFRRLVARFGDDVPDDDELHHRALLRSLGAPLATAV 266 Query: 219 NACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNW 260 + +++ A AA W Sbjct: 267 KRLSGLGEAAIDAWRAWSLAKLSEATCAEDVLVALAALQGGW 308 >UniRef50_P96714 Uncharacterized protein ywqB n=5 Tax=Bacillus RepID=YWQB_BACSU Length = 536 Score = 48.4 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 7 ELLELTPQALTALSNAGFVKRSLKELENGNVPEI-SHENDALIATFSDGVRTQLANGQ-A 64 ELL + N +K++L +V + + + A D V ++ Sbjct: 20 ELLPYNEE------NVQLIKKALILYRQDSVYRLQAVSPTEVTAYVQDVVPVRVTLNLFV 73 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATL 116 + ++ CSC + +CRH + + L + + + W LEE L Sbjct: 74 IVKSGCSCPSGRICRHMLAVFLYVYAMFERVGTFTEY--WLEREKLEESKEL 123 >UniRef50_B8FRC7 Zinc finger SWIM domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FRC7_DESHD Length = 566 Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/96 (11%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVR-----TQLANGQAL 65 + + ++R + ++G++ + L +G +LA + Sbjct: 1 MNLDSFEHEMEKKILERGYQYYQDGHIRSLKETEAGLYQAEVEGNARYRIYVELAEDNTI 60 Query: 66 KEAQCSCGAN--GMCRHRVMLVLSYQRLCATTQSTE 99 ++C C + C+H + + + + Q + Sbjct: 61 LASECDCPYDLGEFCKHEAAVYFALRERKSEVQEQQ 96 >UniRef50_Q96ZU1 Putative uncharacterized protein ST1744 n=1 Tax=Sulfolobus tokodaii RepID=Q96ZU1_SULTO Length = 484 Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 29/92 (31%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKE 67 + + + + ++ + V + + L + + + Sbjct: 1 MESINEKKIIGRFGYNTFEKGKEYYNENRVLSAFLDGNHLQGLVVGTKVYRTSVSLSDLS 60 Query: 68 AQCSCGANGMCRHRVMLVLSYQRLCATTQSTE 99 +CSC G C+H V L+L Y R + Sbjct: 61 NKCSCPLRGDCKHVVALLLFYLREKDKVVNIP 92 >UniRef50_C5SIA7 Non-specific serine/threonine protein kinase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIA7_9CAUL Length = 1107 Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 44/153 (28%), Gaps = 13/153 (8%) Query: 24 FVKRSLKELENGNVPEISHENDALIATF----SDGVRTQLANGQALK------EAQCSCG 73 KR L G V D L A R +++ + + A+C+C Sbjct: 19 TYKRGLTYRLEGRVLSTQLMGDWLEARVRGSGKTDYRVEVSM-RGFRVSPPQFTAECTCP 77 Query: 74 ANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQALVAKGIT 133 C+H V V++Y S + EL L A + T Sbjct: 78 VQYNCKHAVAAVIAYFASSEGEGSEGVPSDETNGAEAPEL-PLSARQWIEDLARLEAPDT 136 Query: 134 IELFCAPGEIPSARLPMSDVRFY-SRSSIRFAR 165 + VR R SI+ AR Sbjct: 137 YPDTINQRVVYILSSSGGGVRTPELRVSIKSAR 169 >UniRef50_UPI0001BC2C91 DNA/RNA helicase, superfamily II, SNF2 family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2C91 Length = 1132 Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 20/135 (14%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNV--PEISHENDALIATFSDGV------RTQLANG 62 ++ + L F +R G V E++ L A + +L Sbjct: 1 MSAKELQDYFGTTFYERGRSYANKGMVGQARWDPEDNTLRADVAGSAAQDYTSIVRLKRH 60 Query: 63 QA------LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATL 116 + +QC+C G C+H V +++ + ++ ++ Sbjct: 61 SPTAKSFTVLSSQCTCPVGGDCKHVVAALMAA------SVRQVAPFGSTALHDPDQRSSP 114 Query: 117 PDATRKRAQALVAKG 131 + + A++ A Sbjct: 115 DPPSWQTARSRTASR 129 >UniRef50_C3JG27 SNF2 family helicase n=3 Tax=Rhodococcus RepID=C3JG27_RHOER Length = 1060 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 37/115 (32%), Gaps = 15/115 (13%) Query: 3 SLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEND------ALIATFSDGVR 56 + + L + A+ R L L V IS A+ T + Sbjct: 1 MQQDSVKALDLDRVRAVVGTTTYDRGLTYLRQNAVVSISWNGTPDTLTGAVAGTAREPYA 60 Query: 57 TQLANGQALKEAQ------CSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWD 105 ++ ++ A C+C C+H V LV A +T ++ WD Sbjct: 61 CTISISHSVAGAATFTRGICTCPVRMNCKHVVALV---LAAVAEANTTPRQLGWD 112 >UniRef50_C0R4X4 SWIM zinc finger family n=2 Tax=Wolbachia RepID=C0R4X4_WOLWR Length = 109 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 13/95 (13%) Query: 22 AGFVK-----RSLKELENGNV--PEISHENDALIATFSDGVRTQLANGQALKEAQCSCGA 74 G +K R + V ++ S+ R L + L CSC A Sbjct: 9 TGLIKEPYRSRGRDYFDKRKVQIISVNESQAKSKVVGSNVYRVTLKHDGPLLSGTCSCPA 68 Query: 75 ---NGMCRHRVM---LVLSYQRLCATTQSTEKEEE 103 G C+H +++ R + + E+ Sbjct: 69 FVYYGPCKHMAATGFALVALDRKEYRSSARPDEQT 103 >UniRef50_A9VLV1 Zinc finger SWIM domain protein n=70 Tax=Bacillus cereus group RepID=A9VLV1_BACWK Length = 129 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 41/136 (30%), Gaps = 18/136 (13%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVR---TQLANGQA 64 + + + + R + E G+V ++ +D + F G + + + Sbjct: 1 MYAYLLKDIMKWIPKYIIDRGYEYYEEGHVEDVEI-HDKKVFAFVTGNAGNYEVIIDLED 59 Query: 65 LKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATL-PDATRKR 123 E+ C C C+H +V Q + E+L L + Sbjct: 60 FAESSCECPYENYCKHMAAVVYEIQ-------------GAGESTVKEQLKGLEKEELLTV 106 Query: 124 AQALVAKGITIELFCA 139 L+ +++ Sbjct: 107 LNRLLQSSKNVQIVET 122 >UniRef50_UPI0001C43088 helicase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43088 Length = 1064 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 12/86 (13%) Query: 16 LTALSNAG-FVKRSLKELENGNVPEISHEN------DALIATFSDGVRTQLANGQALKEA 68 + L+++ KR L+ G V IS+ + ++ V + + +L Sbjct: 10 IRQLASSQPVYKRGLEYYRAGLVEYISYSELYNSYQAKVSGSYMYEVEIDIEDDGSLD-F 68 Query: 69 QCSCGAN----GMCRHRVMLVLSYQR 90 C C A+ G C+H V +L Q Sbjct: 69 ACDCEASYTYPGACKHVVATLLELQE 94 >UniRef50_UPI0001976ACB helicase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976ACB Length = 1339 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 7/75 (9%) Query: 50 TFSDGVRTQLANGQA---LKEAQCSCGA----NGMCRHRVMLVLSYQRLCATTQSTEKEE 102 ++D R A + ++ C+C A G+C+H + LV++Y + + Sbjct: 119 RYADDYRVSAAIDTDAGKVGQSSCTCPAYGRFRGVCKHVIALVMAYNEHPDDFAAADDGN 178 Query: 103 EWDPAIWLEELATLP 117 I +P Sbjct: 179 GSTNGIGRGAAGLVP 193 >UniRef50_Q2BFV7 YwqB n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFV7_9BACI Length = 540 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 24 FVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQA-LKEAQCSCGANGMCRHRV 82 V++ L G V ++ +E D + A D +++ + ++CSC G CRHR+ Sbjct: 33 VVQKGLLLYHQGLVHQLKYEGDQITAVVQDVTLAKVSLDLDFINHSECSCPHEGFCRHRM 92 Query: 83 MLVLSY 88 Sbjct: 93 AAFFYL 98 >UniRef50_B9LW51 Zinc finger SWIM domain protein n=3 Tax=Halobacteriaceae RepID=B9LW51_HALLT Length = 273 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVR--TQLANGQALKEA 68 +T A+ + +R + L G + EI + + A S + ++ Sbjct: 3 VTEDAVRDICTDAVFERGERYLAEGRIHEIHRVDTTVTAVVSGSRQYDVRVDLATGGFAP 62 Query: 69 QCSCGAN--GMCRHRVMLVL 86 C C + G C+H V ++L Sbjct: 63 WCDCPYDGPGACKHVVAVLL 82 >UniRef50_C7NM99 Zinc finger SWIM domain protein n=2 Tax=Halobacteriaceae RepID=C7NM99_HALUD Length = 266 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 4/110 (3%) Query: 24 FVKRSLKELENGNVPEISHENDALIATF--SDGVRTQLANGQALKEAQCSCGANGM--CR 79 +R +G + I D + A S + ++ E++C+C +G C+ Sbjct: 16 VFERGQHYRTDGRIRRIDRFGDVVTAIVQGSSQYDVTVELDESNIESRCTCPYDGPGDCK 75 Query: 80 HRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQALVA 129 H V ++L S D + A + +R Sbjct: 76 HVVAVLLEIAADPPADDSERVTAVLDDVSPADLRAFVRAVLAERPALRDR 125 >UniRef50_A5V0C4 Non-specific serine/threonine protein kinase n=2 Tax=Roseiflexus RepID=A5V0C4_ROSS1 Length = 1068 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 29/160 (18%) Query: 11 LTPQALTALSNAGFVKRSLKELENG--NVPEISHENDALIATFSDGV--RTQLANGQALK 66 L + ++ V++ + E G V + ++ + S GV + L Sbjct: 10 LDIDHILLSTSQTVVQQGRRYYERGQVEVERVDTDSALINVFESPGVAHQVVLRLHNRQI 69 Query: 67 EAQCSCG---ANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKR 123 C+C CRHRV +L+ + W A + +A R + Sbjct: 70 FVSCTCPQRHYWTFCRHRVAAILALRDYLIAHP----PSIW--------RAVIGEAVRAQ 117 Query: 124 AQAL---------VAKGITIELF-CAPGEIPSARLPMSDV 153 Q + + P IP RLP + Sbjct: 118 PQRKPTAQPACIVFSLQYASTAWTIVPYAIPLRRLPPEAL 157 >UniRef50_C9YX19 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YX19_STRSW Length = 654 Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 40/369 (10%), Positives = 79/369 (21%), Gaps = 64/369 (17%) Query: 118 DATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRS------SIRFARCDCIEG 171 + ++ + A G R + A C C+ Sbjct: 21 TSRLRKKLDAAIETYAALPVTADGAALRVRCGEDAEVTLTPGPSGTVTDAERAVCSCLLA 80 Query: 172 TLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNA----------- 220 C H + A A + + T + + Sbjct: 81 PRCLHRAAVLSACPVADTEAEGVGTNGAAADAVTETDGPAGTGTPDPGGSDDATTTGGSA 140 Query: 221 --------------------------------CRQYVQQLSQTLWLGGISQPLIHYEAAF 248 + + + G+ +A Sbjct: 141 ADNSATGTGTGTGTPGTPHTPAAAPPTPAQTAAAAGLWAATAAVLAAGVPGAGAVPQAEL 200 Query: 249 NRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMAR 308 RA A + ++ + AR + + + + L Sbjct: 201 LRAAHTARLAGLHRAEAAALRVVRGLRGARARHEGHRLADLVANVRELLLTTGLLSAADP 260 Query: 309 RDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSIL 368 +VG+ LR+ + YG + D G Sbjct: 261 DPG-----------LVGTARRAYRPGGSLRVHGVCREPVISATGYGGVVTHLVSDEGDWF 309 Query: 369 HLSRSWPRSEQENSPAATRRLF----SFQAGALAGGQIVSQAAKRSADGELLLATRNRLS 424 ++ P A T + + L+ G ++ A S DG L R + Sbjct: 310 SIADVRPGGPARARGAGTATVALGSGTLDHAGLSRGGLLVSGATLSPDGRLGSGKGVRAT 369 Query: 425 SVVPLSPDA 433 + LS + Sbjct: 370 PLTGLSWTS 378 >UniRef50_C7GAU0 Superfamily II DNA/RNA helicase, SNF2 family n=2 Tax=Roseburia RepID=C7GAU0_9FIRM Length = 1099 Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 85/289 (29%), Gaps = 36/289 (12%) Query: 25 VKRSLKELENGNVPEISH---ENDAL---------IATFSDGVRTQLANGQA---LKEAQ 69 +R + E G V E S+ D + T D +L + + E++ Sbjct: 16 YRRGKELYERGLVQEFSYDVYTEDGVPKAELIGRVKGTVEDHYDVRLVIDEEYAEVSESR 75 Query: 70 CSCGA----NGMCRHRVMLVLSY----QRLCATTQSTEKEEEWDPAIWLEELATLPDATR 121 C+C A G+C+H V + L+Y Q E+ + E D + Sbjct: 76 CNCEAFCNYEGICKHCVAVALAYVNRRQAKDILNAKLGVSEKTEQKNIRTEKELKTDTSL 135 Query: 122 KRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAV 181 K + L F S +A + G ++V+ + Sbjct: 136 KNLLNRYSMRAGSTYLLPENIYGKVELEP---YFKMEYS--YATVEFKIGMEQKYVLKNI 190 Query: 182 QAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPL 241 AF+ + + + H+ + +E +++Q Sbjct: 191 SAFLHSIKINEKVRYGKKLEFYHHLDA-----FTESAKRMIAFMEQQEMDKRRQSQFHAY 245 Query: 242 IHYEAAFNRALQAAETCNWRWVSESLRQL--RASVDAFHARASHYNAGE 288 Y ++ R ++ E++ + A V ++ E Sbjct: 246 YAYTGSYER-TMELDSVGIDRFFEAVGDMPFEAEVGFLPEDTYTFSPEE 293 >UniRef50_Q1D1H2 SNF2/helicase domain protein n=2 Tax=Cystobacterineae RepID=Q1D1H2_MYXXD Length = 1083 Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 11/98 (11%) Query: 4 LRPELLELTPQALTAL---SNAGFVKRSLKELENGNVPEISHENDAL----IATFSDGVR 56 +R L Q L AL K+ + E+ V ++ E D + + + + Sbjct: 7 IREILPPQDTQWLRALKAEVQPTTFKQGREVAESRRVFGLNREGDRISAQVAGSSGERYQ 66 Query: 57 TQLANGQALKEAQCSCGANGM----CRHRVMLVLSYQR 90 T L G + C+C + + C+H V L Y Sbjct: 67 TALHLGNGRATSTCTCPSWNVEGPHCKHVVAAALIYAA 104 >UniRef50_B8HQN2 Zinc finger SWIM domain protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HQN2_CYAP4 Length = 605 Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 7/84 (8%) Query: 10 ELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFS----DGVRTQLANGQA- 64 + L + + +R + G V E+ + + A + L + Sbjct: 5 SFSEATLRSHATPSSFERGEDYYQGGAVIEVIKRDHLIQARVEGNELEPYTVTLECDRGG 64 Query: 65 LKEAQCSCGAN--GMCRHRVMLVL 86 +++A CSC G C+H V L Sbjct: 65 IRQAYCSCPYGFEGWCKHIVATGL 88 >UniRef50_B0UB74 Non-specific serine/threonine protein kinase n=2 Tax=Rhizobiales RepID=B0UB74_METS4 Length = 1120 Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 26/220 (11%), Positives = 60/220 (27%), Gaps = 8/220 (3%) Query: 11 LTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF---SDGVRTQLA---NGQA 64 + + A + L G V E + + + R + G+ Sbjct: 3 YSRSDIVAACGPNATRAGQSYLREGRVLEATRNGAGISGEVQGSDEPYRLVVDLRERGKG 62 Query: 65 LK-EAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKR 123 L+ E CSC C+H ++LS + + + + A + Sbjct: 63 LRIEGTCSCPVARNCKHVAAVLLSLLDEASEPPGDPVAQRLERLLAPAPTARGAARAGRP 122 Query: 124 AQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQA 183 A A + + A + A R ++ + + + G + L V + Sbjct: 123 AAQAEALPPALARWVAQLDRAQATAGEDYPRSINQR-LVYVLGSLLAGEGLPRLALQVIS 181 Query: 184 FVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQ 223 K + +++ + + + Sbjct: 182 TRLRKDGTFSEGGSPYLLQAGASPARFLRPSDLRIHRLLA 221 >UniRef50_B4S7J0 Zinc finger SWIM domain protein n=2 Tax=Chlorobiaceae RepID=B4S7J0_PROA2 Length = 567 Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 6/80 (7%) Query: 24 FVKRSLKELENGNVPEISHENDALIATFSDGVR---TQLANGQALK-EAQCSCGANG--M 77 ++R L NG V + + G + ++ + E CSC + + Sbjct: 16 ILRRGLAYFRNGKVDVPEELRPGVYSAIVYGSQAYSVRVTVADGIITEHVCSCPYDTAPV 75 Query: 78 CRHRVMLVLSYQRLCATTQS 97 C+H ++ Q+ Q Sbjct: 76 CKHVAAVLYYLQQDAPGLQQ 95 >UniRef50_B4V2I4 Putative uncharacterized protein n=4 Tax=Streptomyces RepID=B4V2I4_9ACTO Length = 576 Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 4/97 (4%) Query: 2 NSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQL-A 60 +R + LT L A++ +R L ++ E+ ++ +L Sbjct: 16 TGVRRAMGGLTEAQLRAVAGERSYERGLGYVDAVYGIEVGDGWIRASVRGTERYEVRLVP 75 Query: 61 NGQALKEAQCSCGA---NGMCRHRVMLVLSYQRLCAT 94 G+ C C C+H V L L+ A Sbjct: 76 GGRGRLAGTCDCPYGQEGNFCKHLVALGLALIGQEAD 112 >UniRef50_Q09DU4 Swim zinc finger domain protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09DU4_STIAU Length = 421 Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 55/409 (13%), Positives = 101/409 (24%), Gaps = 56/409 (13%) Query: 6 PELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF----SDGVRTQLAN 61 P L LT L + R L V + L L+ Sbjct: 17 PSLGWLTVALLQEAAGPRTFNRGRVCLAQRRVASYEVTENELRGKVLNRHGKPQEVFLST 76 Query: 62 GQALKEAQCSCGA---NGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPD 118 +C C A NG+C+H V L L++ + E Sbjct: 77 DVDGLSCECECTAFWSNGICKHIVALGLAFLGARPPQEEPAAE---------AASKAERP 127 Query: 119 ATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFA-RCDCIEGTLC--- 174 T K +A + + LP S + ++G+L Sbjct: 128 RTPKAVEAWLEAHQVTHARRESLSVVLPLLPSGFRTSQVVSELGHLPVTAVLDGSLDLSR 187 Query: 175 --------EHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQ 226 + A +++ +A++ Q R+ P RQ ++ Sbjct: 188 RVQGTLQQSLLWEAAWKWLDMEARRVRRGLEHEQERARLPRP---PLTDARLEPWRQVLE 244 Query: 227 QLSQTLWLGGISQPLIHYEA-AFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYN 285 + + + + + L F+ R +S ++ + V + Sbjct: 245 RERERVRAHAVPRLLSGRSTVTFHERPLRLYVEEPRRLSGAVGKPEGFVPKMR---VSVD 301 Query: 286 AGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMR 345 L A L + A L SL Sbjct: 302 PRALLEGRAGLWCWCTPDEAEAHCVHALSALDTL-------------------LDSLSAP 342 Query: 346 CWQDIEHYGLRIWFTDPDTGSILHLSR--SWPRSEQENSPAATRRLFSF 392 + F +P + + + + P E +A+R F Sbjct: 343 EEAARNARLAELLFVEPGRQLLGAIEKVAAVPLPSFEAPDSASRIAFRL 391 >UniRef50_B6YTC8 Putative uncharacterized protein n=2 Tax=Thermococcus RepID=B6YTC8_THEON Length = 176 Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 47/123 (38%), Gaps = 8/123 (6%) Query: 24 FVKRSLKELENGNVPEISHEND----ALIATFSDGVRTQLANGQALKEAQCSCGANGMCR 79 +K+ + + G V + + D ++ T+ L+ G+ +C+C G C+ Sbjct: 5 TLKKGERYYKAGKVLWVVKQGDTLFSKVLGTYPYYAELTLSTGEN----RCTCPLGGDCK 60 Query: 80 HRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQALVAKGITIELFCA 139 H + +Y+ + E + A+ +E LA +P+ + ++ + + Sbjct: 61 HVAATLKAYENGFYFEALEKHAELYPEAVAMEFLAEVPELALDVTLKELRFAMSTDESGS 120 Query: 140 PGE 142 Sbjct: 121 EAA 123 >UniRef50_B2J8R9 Zinc finger, SWIM domain protein n=11 Tax=Cyanobacteria RepID=B2J8R9_NOSP7 Length = 636 Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 7/100 (7%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHEN----DALIATFSDGVRTQL-ANG 62 + ++T + +N +R E G V ++ + T + L + Sbjct: 48 IPQITEFTIRRHANTKSFQRGEAYYEAGAVHTVTQRGHLLQAEVAGTEARPYHVNLSFDS 107 Query: 63 QALKEAQCSCGA--NGMCRHRVMLVLSYQRLCATTQSTEK 100 L A C+C +G C+H + +L R + + Sbjct: 108 SGLTSANCTCAYNFDGWCKHIIATMLVCVRDSESIEQRPT 147 >UniRef50_C3MCS3 Putative uncharacterized protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MCS3_RHISN Length = 605 Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 88/349 (25%), Gaps = 45/349 (12%) Query: 12 TPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF--SDGVRTQLANGQALKEAQ 69 AL L R V ++ + + ++A ++ R +L Sbjct: 53 NVDALRELVGKTVFARGEAYFREDRVELLAIKPERVLARVKGTESYRVELTGQGRAFGGD 112 Query: 70 CSCGA---NGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQA 126 C+C A G C+H V + L+ + A L + Sbjct: 113 CTCVAFDDRGSCKHMVAVALAANAGGGEAGQDGT------GTFARIRAHLQAKSIDALV- 165 Query: 127 LVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVE 186 + D R + D T+ +H+ A+ + + Sbjct: 166 ----------------DMIMEIAEFDSDLLHRLDMAALATDGDSKTIEKHLRRAIDSATQ 209 Query: 187 AKAQQAEFNHLIWQMRS-EHVTSSDDPFASEEGNACRQYVQQLSQTLW---------LGG 236 W + + G Q + + G Sbjct: 210 IDDYVGYREAAGWAADVHRVLNVVAELPGKGHGELALQLAEHTFDRIQDAMENIDDSDGH 269 Query: 237 ISQPLIHYEAAFNRALQAAETCNWRWVSESL-RQLRASVDAFHARASHYNAGECLHQLAA 295 S L A +A + R++ D F+ A Y LA Sbjct: 270 CSTLLDRTRDIHLAAARAVRPDPVLLARDLFKREMEGEYDTFYNAAGTYADILGDEGLAE 329 Query: 296 LNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGM 344 RL +A + + + + A ++L + L ++G Sbjct: 330 -YRRL----ALAAWEKLPPLRGGGGTRSRTAYTADYSQLRRI-LDTVGA 372 >UniRef50_Q2SAU7 Protein containing SWIM Zn-chelating domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAU7_HAHCH Length = 440 Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 89/324 (27%), Gaps = 38/324 (11%) Query: 25 VKRSLKELENGNVPEISHENDAL----IATFSDGVRTQLANGQALKEAQCSCGANGM-CR 79 VK + K P + + +DA+ + S ++++ +CSC + C+ Sbjct: 8 VKAAQKLTSTSKWPLLEYNDDAIWGHCQGSGSKPYQSRIDLSGP--AFKCSCPSRKFPCK 65 Query: 80 HRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQALVAKGITIELFCA 139 H + L L Y + + +W A WLE A +RAQ + Sbjct: 66 HGLALFLLYAQQQNGFTRQQDAPDWV-AEWLESRADREQKKVERAQNKKPVDAAAKEKRK 124 Query: 140 PGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIW 199 + ++ ++ AR + + AQ + + Sbjct: 125 EQRELKVSAGVEELTLWAED---VARTGLADLQNKNYQYWKNLESRMVDAQAPGLANHVR 181 Query: 200 QMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETC- 258 QM S +T + + + + + + Sbjct: 182 QMASLAITGDRMSELAASLSRLYLLLNAY-----------------DRMEQLAEDLQADI 224 Query: 259 ----NWRWVSESLRQLRASVDAFHARASHYNAG-----ECLHQLAALNSRLNCAQEMARR 309 W+W + L + D + A + + +H + + R+ A Sbjct: 225 RTQIGWQWSQDELLAIHPVEDVWLALSHSQTQEDRLVMQVIHLVGLESGRMAKVVNFAHE 284 Query: 310 DSIGEVPPVPWRTVVGSGIAGEAK 333 + + G A Sbjct: 285 TQRSSLVMGWRGGQLIRGKAHFYP 308 >UniRef50_B0SY81 Zinc finger SWIM domain protein n=1 Tax=Caulobacter sp. K31 RepID=B0SY81_CAUSK Length = 541 Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 5/93 (5%) Query: 10 ELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF--SDGVRTQLANGQALKE 67 L+ + L + + R G V +S +D +A S+ R +L + E Sbjct: 7 TLSDRRLERAAGSAAFARGAAYHAQGRVDLLSLGDDQAVARVTGSEIYRVRLRWRGGVAE 66 Query: 68 AQCSCGA---NGMCRHRVMLVLSYQRLCATTQS 97 C C A C+H V L ++ + + Sbjct: 67 GACDCPAFDSTDFCKHMVALAITARERTDDGPA 99 >UniRef50_Q2FM81 Zinc finger, SWIM-type n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FM81_METHJ Length = 131 Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 4/85 (4%) Query: 23 GFVKRSLKELENGNVPEISHENDALIATFSDGVR----TQLANGQALKEAQCSCGANGMC 78 R +G+V + +D +I +G + + ++C+C C Sbjct: 4 QTASRGRSYQRSGHVSSVYQISDDIICGSVEGTKEYDTVVSVSVSDSLSSRCTCPVGLDC 63 Query: 79 RHRVMLVLSYQRLCATTQSTEKEEE 103 +H V L+L Y K E Sbjct: 64 KHGVALMLEYLERLKRGIEVSKPPE 88 >UniRef50_A3TJ52 SNF2-like n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJ52_9MICO Length = 1099 Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 36/116 (31%), Gaps = 10/116 (8%) Query: 8 LLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIA----------TFSDGVRT 57 L +L+ + L A ++ + R+ G V I + A + V Sbjct: 8 LDDLSDRDLAAAFDSMTLVRAGDYARAGRVTSIVVADHGTRAGARVIGSGAAIYRTEVTL 67 Query: 58 QLANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEEL 113 + + C+C C+H L+++ + + W + L Sbjct: 68 STDDHGTFVGSDCTCPIGVACKHAAALLIALRTQRPWRSDATAADPTRSPSWRDAL 123 >UniRef50_B1J601 Non-specific serine/threonine protein kinase n=18 Tax=Pseudomonadaceae RepID=B1J601_PSEPW Length = 1108 Score = 44.1 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 37/130 (28%), Gaps = 12/130 (9%) Query: 17 TALSNAGFVKRSLKELENGNVPEISHENDALIA--------TFSDGVRTQLANGQALKEA 68 +AG + R K +S + ++ A + ++ L G Sbjct: 17 VDFIDAGALARGRKYAAQERTRILSLQGHSIEAMCRGSAGQIYHQDIKLVLNYGDLRVFG 76 Query: 69 QCSCGANGMCRHRVMLVLSY----QRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRA 124 CSC C+H V +L + L A + P + + Sbjct: 77 SCSCPVGLNCKHCVAALLQLELEDRDLEAGATQGQAALSLPPDLNQWVQGLESPSPIAAT 136 Query: 125 QALVAKGITI 134 + KG I Sbjct: 137 KEPARKGPAI 146 >UniRef50_C8WZW0 SNF2-related protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZW0_DESRD Length = 1062 Score = 43.8 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 22/87 (25%), Gaps = 5/87 (5%) Query: 16 LTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGV--RTQLANGQALKEAQCSCG 73 L+ R G V ++ T G L + CSC Sbjct: 19 LSEYFRKHIRNRGNTYFREGRVRLRQATATSVKGTVDGGQSYTVHLIAEEDGFRVYCSCP 78 Query: 74 A---NGMCRHRVMLVLSYQRLCATTQS 97 G C+H + + A + Sbjct: 79 YFSQGGACKHLWAAIRAADAKLAERAA 105 >UniRef50_B7A8M7 Zinc finger SWIM domain protein n=3 Tax=Thermus RepID=B7A8M7_THEAQ Length = 469 Score = 43.8 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 42/157 (26%), Gaps = 23/157 (14%) Query: 13 PQALTALSNAGFVKRSLKELENGNVPEISHEND----ALIATFSDGVRTQLANGQALKEA 68 + + R L + G V + + + + + R ++ G Sbjct: 11 EEDFAPFFPREVLHRGLAYAKEGRVRRVFRVGERLLGEVQGSEPEPYRVEVGPGL---LG 67 Query: 69 QCSCGANGM-CRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELAT------------ 115 +C+C G C+H L+ +Y E P L Sbjct: 68 RCTCPYPGFPCKHAAALLYAYLEARPREDLLMSLERLPPEEAKALLKALAQVPEVALWLG 127 Query: 116 ---LPDATRKRAQALVAKGITIELFCAPGEIPSARLP 149 LP+ + + + + + RLP Sbjct: 128 EVLLPEKSFLEGVRALRQAFLLGGGEEEAKALLLRLP 164 >UniRef50_B7GRW8 Zinc finger, SWIM domain protein n=3 Tax=Bifidobacterium longum RepID=B7GRW8_BIFLI Length = 901 Score = 43.8 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 2/71 (2%) Query: 27 RSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEAQCSCGANGM--CRHRVML 84 R K+ N E + ++ A ++ SD T N ++ A C+C C+H + Sbjct: 249 RLSKDARGENANEANTDDQATTSSNSDHESTTDDNSIRIQSAACTCPYQRTPYCKHIGAV 308 Query: 85 VLSYQRLCATT 95 + ++ Sbjct: 309 LYELRKQLIGA 319 >UniRef50_Q7NI99 Gll2284 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NI99_GLOVI Length = 580 Score = 43.8 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 40/137 (29%), Gaps = 6/137 (4%) Query: 17 TALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGV--RTQLANGQALKEAQCSCG- 73 + ++ + R + +G V + L A + QL C C Sbjct: 18 SEIAGSRTFARGREYCRSGRVHSLIEREGRLRAVVEGAQLYQVQLWAEDGELAYACDCPV 77 Query: 74 -ANGM-CRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLP-DATRKRAQALVAK 130 ++G+ C+H V + L++ + + + L L + A+ Sbjct: 78 GSDGIFCKHCVAVALAWLDDPEAVEEQTAQHRTAESKLRTYLEGLDRTELVRLLLEQAAQ 137 Query: 131 GITIELFCAPGEIPSAR 147 + +A Sbjct: 138 DVDFGERLQLKAAATAE 154 >UniRef50_Q82QP8 Putative uncharacterized protein n=1 Tax=Streptomyces avermitilis RepID=Q82QP8_STRAW Length = 555 Score = 43.8 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 12/116 (10%) Query: 13 PQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQAL-KEAQCS 71 L AL+ +R ++ E+ + + +D +LA G +C Sbjct: 5 EDELRALAGTRSFERGSGYVDAVRGLEVGDGSVTAVVHGTDIYEVELALGAGAGVSGRCD 64 Query: 72 CGA---NGMCRHRVMLVL-------SYQRLCATTQSTEKE-EEWDPAIWLEELATL 116 C C+H V + L + R A ++ E W A+ +EL L Sbjct: 65 CPYGQEGNFCKHCVAVGLTVLRQAEAIPRQRADARTRASGLEAWLTALSRDELLAL 120 >UniRef50_A8TDQ5 Zinc finger SWIM domain protein n=1 Tax=Methanococcus voltae A3 RepID=A8TDQ5_METVO Length = 277 Score = 43.4 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 29/77 (37%) Query: 12 TPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEAQCS 71 L L N + R N N+ ++ L + G + ++ QC+ Sbjct: 27 NKTILNNLYNEKVIDRGYYYYLNRNIIYNVRYDNYLYGVVAGGQKYKVKVDLKNLTGQCT 86 Query: 72 CGANGMCRHRVMLVLSY 88 CG C+H L+LSY Sbjct: 87 CGYKNNCKHAYALILSY 103 >UniRef50_C6D0B9 Zinc finger SWIM domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0B9_PAESJ Length = 482 Score = 43.4 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 8 LLELTPQALTALS-NAGFVKRSLKELENGNVPEISHENDAL------IATFSDGVRTQLA 60 + LT + +L+ NAG +K ++ + P + D + + R + Sbjct: 1 MTSLTEAYVDSLAPNAGAMKNGRDLVKKNSFPVLRRTEDGTLLFGECKGSGKEPYRCSVD 60 Query: 61 ---NGQALKEAQCSCGANGM-CRHRVMLVLSY 88 + ++CSC + C+H + L+ +Y Sbjct: 61 FVQPDNPV--SRCSCPSRQFPCKHTLGLMYAY 90 >UniRef50_B0PH91 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PH91_9FIRM Length = 899 Score = 43.0 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 52/403 (12%), Positives = 100/403 (24%), Gaps = 32/403 (7%) Query: 117 PDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFA-------RC--- 166 + R L ++ P + + FY C Sbjct: 215 SPSKLAREANLFNTELSFSAIAHALAHPETDEFLGTLEFYPEEGKYHMDGHRGCKVCLTP 274 Query: 167 --DCIEGTLCEH--VVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDP-------FAS 215 G +C + V + ++ + + P ++ Sbjct: 275 AETAAAGGVCPVCGRRITVGVLHRVEELADRPEGFRPKLAKDFESIIPLPETIAACIGST 334 Query: 216 EEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVD 275 + ++L Q L +S +R R + D Sbjct: 335 PASKKVQVRYEELLQELGPE-LSVLRQIPLEELSRLAGPCVAEGVRRLRAGEVAWEPGYD 393 Query: 276 AFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLD 335 + RA+ +A E ++ ++ +R+ + + P + GS A Sbjct: 394 GEYGRAALLDAREIAAYSGQVSFFAGSGEKPSRKKAAAPINDAPKKAATGSAALKHAAAL 453 Query: 336 HLRL--VSLGMRCW--QDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFS 391 L R W + + + P TG L R + + A + Sbjct: 454 AGAAAHYGLNERQWEAVSAQGRQITVV-AGPGTGKTRTLVYRIRRLIETGAAAPGQITAV 512 Query: 392 FQAGALAG--GQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVAL 449 A + Q R ++ + T + L + L AL Sbjct: 513 TFTNKAAAELAGRLEQELGRRTARKVSVGTFHGLCMKLLRDRLGDVTLIDETAAL---AL 569 Query: 450 REYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDA 492 E L RP + + + D + QTL A Sbjct: 570 VEELCAELGLKKRPRDALAAVSARKNGLTAGKEADEAEQTLFA 612 >UniRef50_B5EQ57 Non-specific serine/threonine protein kinase n=4 Tax=Proteobacteria RepID=B5EQ57_ACIF5 Length = 1113 Score = 43.0 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 30/99 (30%), Gaps = 3/99 (3%) Query: 6 PELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDA---LIATFSDGVRTQLANG 62 P L + + ++++ ++ + E D + T R + Sbjct: 18 PTLGTYGYEDIRKWVGDLEIRKAQPYQKSISHLEQRGSTDLSALVQGTAHTPYRVDIHLS 77 Query: 63 QALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKE 101 Q C+C C+H ++L+ + T Sbjct: 78 QGHLVTLCTCPVGSRCKHVTAVLLALLAGRSHAAPTPAP 116 >UniRef50_A0L971 Zinc finger, SWIM domain protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L971_MAGSM Length = 608 Score = 43.0 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 6/126 (4%) Query: 9 LELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATF--SDGVRTQLANGQALK 66 LT + L+ + R + ++G V + + + + + QL + Sbjct: 27 KALTTATIMELAGNRYYWRGNEYFQDGAVTSLKESDGIITGKVQGTRAYKVQLWVEEDEL 86 Query: 67 EAQCSCGANG---MCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWL-EELATLPDATRK 122 E CSC C+H V + L++ E ++ +I + L +++ Sbjct: 87 EHNCSCPLGEDCEFCKHCVAVGLAWLARDQKAPLAEAGKKASDSIGEKDVRDFLMGKSKE 146 Query: 123 RAQALV 128 ++ Sbjct: 147 ALVEML 152 >UniRef50_A9GFG7 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GFG7_SORC5 Length = 1141 Score = 43.0 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 8/105 (7%) Query: 6 PELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEND----ALIATFSDGVRTQLAN 61 L L+ + L L A R L+ V +IS + A S+ ++ Sbjct: 39 DALSTLSDRGLRRLLGARTFLRGLEYFRRRVVEDISINETMASGTVRAADSEPYPVKVEL 98 Query: 62 GQALKEAQCSCG----ANGMCRHRVMLVLSYQRLCATTQSTEKEE 102 ++QCSC A C+H L++S + Q + Sbjct: 99 SPDGIQSQCSCPAFQKAGQHCKHVAALLISIRDQARGAQPRREPP 143 >UniRef50_UPI00016C3DDA SNF2-related protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DDA Length = 1098 Score = 42.6 bits (98), Expect = 0.043, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 52/163 (31%), Gaps = 22/163 (13%) Query: 16 LTALSNA---GFVKRSLKELENGNVPEISHENDALIATFS--DGVRTQLANGQALKEAQC 70 LT L++ R + NG V ++A+ AT D L A C Sbjct: 15 LTTLASQVPQTIRDRGREYYRNGAVTLDRTTHNAVAATVEGADDYEVDLLLEGQTVFAAC 74 Query: 71 SCGAN----GMCRHRVMLVLSYQRLCATTQS-----------TEKEEEWDPAIWLEELAT 115 SC +C+H V++ + E E D A Sbjct: 75 SCPYTAEHGAICKHIWATVIAADAGPFARSAAAKGTLHLVLDEEAFYEDDYADPYPLRLP 134 Query: 116 LPDATRKRAQAL--VAKGITIELFCAPGEIPSARLPMSDVRFY 156 P A +K+ + + ++ E+ A G P+ R + F Sbjct: 135 APAAPKKKKENWADLLAAVSREIQPATGTRPTVRTTEQQLVFI 177 >UniRef50_UPI00017453E0 probable helicase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017453E0 Length = 896 Score = 42.2 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 10/146 (6%) Query: 17 TALSNAGFVK-RSLKELENGNVPEISHENDALIATFSDGVRTQLANGQAL-KEAQCSCGA 74 L+ G VK R+ + L + + D + F V Q + + L ++C C A Sbjct: 27 AQLAKQGRVKIRAAELLSEQELEITAFVTDNRLTQFETTVTLQFKDARRLSIMSRCLCPA 86 Query: 75 NGMCRHRVMLVLS-----YQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQ---A 126 C+H L++ Q + A LP + + Sbjct: 87 GAYCKHAAALLVQATDRKLQDEIEERVTAPPPPPPVARASAIAKAKLPIHLLEAGRPEPV 146 Query: 127 LVAKGITIELFCAPGEIPSARLPMSD 152 LV + I L RLP++D Sbjct: 147 LVLRRIDASLPKDAKSSKLLRLPVAD 172 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.305 0.114 0.251 Lambda K H 0.267 0.0346 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,100,362,255 Number of Sequences: 3077464 Number of extensions: 63988192 Number of successful extensions: 232301 Number of sequences better than 1.0e-01: 142 Number of HSP's better than 0.1 without gapping: 53 Number of HSP's successfully gapped in prelim test: 205 Number of HSP's that attempted gapping in prelim test: 231741 Number of HSP's gapped (non-prelim): 367 length of query: 614 length of database: 1,040,396,356 effective HSP length: 135 effective length of query: 479 effective length of database: 624,938,716 effective search space: 299345644964 effective search space used: 299345644964 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 95 (41.4 bits)