 |
| Job Description | P33020 | | Confidence | 95.34% | Date | Thu Jan 5 11:50:55 GMT 2012 |
| Rank | 217 | Aligned Residues | 48 |
| % Identity | 29% | Template | c3jthA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcription activator hlyu; |
PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6
|
| Resolution | 2.00 Å |
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | N | R | E | K | E | I | L | A | I | L | R | R | N | P | L | I | Q | Q | N | E | I | A | D | M | L | Q | I | S | R | S | R | V | A | A | H | I | M | D | L | M | R | K | G | R | I | K | G | K |
| Query Conservation |   |
  |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|
|   |
|
|   |   |
|   |   |   |   | . |   |   |   |   |
|
|
|   |   |
|   |
|
|   |   |   |
|
|   |
|
|   |   |
|   |   |
|
|
|
|   |   |   |
| Template Sequence |   |
N | E | R | R | L | Q | I | L | C | X | L | H | N | Q | E | . |
L | S | V | G | E | L | C | A | K | L | Q | L | S | Q | S | A | L | S | Q | H | L | A | W | L | R | R | D | G | L | V | T | T | R |
| Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  | T | T | T | S |
| . |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|