112 c1rnlA_ Probab=99.73   E-value=9.3e-17  Score=116.04  Aligned_columns=105  Identities=28%

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCC-CCEE
Q ss_conf             886599975998999999999985899549999799899999998479989999785539898999999998779-9899
Q batch____         2 SKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRP-MPVV   80 (349)
Q Consensus         2 ~~irILIvDD~~~~r~~l~~~L~~~~~~~vV~~a~~g~eal~~l~~~~pDliilD~~mP~~dG~e~l~~i~~~~~-~pvI   80 (349)
                      +|+|||||||++.++..++.+|++.+++.+|++|.|+.||++.+.+..||++++|+.||+++|++.++.++...| .+++
T Consensus         1 ~pi~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~a~~~~eal~~~~~~~pdiilld~~l~~~~g~~~~~~~~~~~~~~~~~   80 (200)
T c1rnlA_           1 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIV   80 (200)
T ss_dssp             CCEEEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEEETTCGGGCHHHHHHHHTTSCCCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf             97089997499899999999998489817999978989999999871997554211111000136899974203100123


Q ss_pred             EEECCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf             9956888368999988631366576479
Q batch____        81 MVSSLTGKGSEVTLRALELGAIDFVTKP  108 (349)
Q Consensus        81 viS~~~~~~~~~~~~al~~GA~d~i~KP  108 (349)
                      ++++  .........+...+..++..|+
T Consensus        81 ~~~~--~~~~~~~~~~~~~~~~~~~~~~  106 (200)
T c1rnlA_          81 VFSV--SNHEEDVVTALKRGADGYLLKD  106 (200)
T ss_dssp             EECS--CSCHHHHHHHHHTTCSEEECTT
T ss_pred             CCCC--CCCHHHHCCCCCCCCCCCCCCC
T ss_conf             4445--3101110000112222221001